Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	58	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.a.b.b.a.b ##20	ENSGT00950000183076.a.a ##20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Amniota	ANCESTRAL SPECIES	4	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Mammalia	ANCESTRAL SPECIES	10	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Theria	ANCESTRAL SPECIES	11	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Eutheria	ANCESTRAL SPECIES	6	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Carnivora	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Felidae	ANCESTRAL SPECIES	6	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Panthera	ANCESTRAL SPECIES	6	ENSGT00900000143472 #8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00900000143472 #8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00390000009443.j #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
leopard	MODERN SPECIES	40	ENSPPRG00000003110 #7	ENSPPRG00000004205 #8	FAM169A (ENSPPRG00000005349) #9	GCNT4 (ENSPPRG00000017075) #10	ENSPPRG00000006600 #11	HMGCR (ENSPPRG00000008332) #12	CERT1 (ENSPPRG00000009941) #13	POLK (ENSPPRG00000012504) #14	ANKDD1B (ENSPPRG00000013528) #15	POC5 (ENSPPRG00000017915) #16	ENSPPRG00000021813 #17	SV2C (ENSPPRG00000024498) #18	F2RL2 (ENSPPRG00000024088) #19	IQGAP2 (ENSPPRG00000001278) #20	F2R (ENSPPRG00000001748) #21	F2RL1 (ENSPPRG00000001778) #22	S100Z (ENSPPRG00000002129) #23	CRHBP (ENSPPRG00000002387) #24	AGGF1 (ENSPPRG00000004438) #25	ZBED3 (ENSPPRG00000017742) #26	PDE8B (ENSPPRG00000012726) #27	WDR41 (ENSPPRG00000015058) #28	OTP (ENSPPRG00000015334) #29	TBCA (ENSPPRG00000018237) #30	AP3B1 (ENSPPRG00000019993) #31	ENSPPRG00000020501 #32	SCAMP1 (ENSPPRG00000000330) #33	LHFPL2 (ENSPPRG00000000681) #34	ENSPPRG00000000967 #35	ARSB (ENSPPRG00000002867) #36	DMGDH (ENSPPRG00000002973) #37
lion	MODERN SPECIES		FAM169A (ENSPLOG00000002487) #9	ENSPLOG00000002461	GCNT4 (ENSPLOG00000002455) #10	ENSPLOG00000002438 #11	ENSPLOG00000002411	HMGCR (ENSPLOG00000002361) #12	CERT1 (ENSPLOG00000002211) #13	POLK (ENSPLOG00000002076) #14	ANKDD1B (ENSPLOG00000002011) #15	POC5 (ENSPLOG00000001946) #16	ENSPLOG00000001913	SV2C (ENSPLOG00000001869) #18	F2RL2 (ENSPLOG00000001850) #19	IQGAP2 (ENSPLOG00000001777) #20	F2R (ENSPLOG00000001727) #21	F2RL1 (ENSPLOG00000001714) #22	S100Z (ENSPLOG00000001701) #23	CRHBP (ENSPLOG00000001686) #24	AGGF1 (ENSPLOG00000001638) #25	ZBED3 (ENSPLOG00000001610) #26	PDE8B (ENSPLOG00000001335) #27	WDR41 (ENSPLOG00000001110) #28	OTP (ENSPLOG00000001071) #29	TBCA (ENSPLOG00000001046) #30	AP3B1 (ENSPLOG00000000902) #31	SCAMP1 (ENSPLOG00000000849) #33	LHFPL2 (ENSPLOG00000000832) #34	ENSPLOG00000000818 #35	ARSB (ENSPLOG00000000803) #36	DMGDH (ENSPLOG00000000773) #37	BHMT2 (ENSPLOG00000000718)
Tiger	MODERN SPECIES	134	GFM2 (ENSPTIG00000021698)	ENSPTIG00000021404 #7	ENSPTIG00000005537 #8	FAM169A (ENSPTIG00000020456) #9	GCNT4 (ENSPTIG00000005529) #10	ENSPTIG00000019989 #11	HMGCR (ENSPTIG00000018612) #12	CERT1 (ENSPTIG00000016589) #13	POLK (ENSPTIG00000014864) #14	ANKDD1B (ENSPTIG00000013441) #15	POC5 (ENSPTIG00000011856) #16	SV2C (ENSPTIG00000010098) #18	F2RL2 (ENSPTIG00000009666) #19	IQGAP2 (ENSPTIG00000021975) #20	F2R (ENSPTIG00000021894) #21	F2RL1 (ENSPTIG00000021859) #22	S100Z (ENSPTIG00000021832) #23	CRHBP (ENSPTIG00000021691) #24	AGGF1 (ENSPTIG00000021519) #25	PDE8B (ENSPTIG00000014747) #27	WDR41 (ENSPTIG00000011923) #28	OTP (ENSPTIG00000011169) #29	TBCA (ENSPTIG00000009506) #30	AP3B1 (ENSPTIG00000008485) #31	SCAMP1 (ENSPTIG00000007335) #33	LHFPL2 (ENSPTIG00000006957) #34	ARSB (ENSPTIG00000003156) #36	DMGDH (ENSPTIG00000021430) #37	BHMT2 (ENSPTIG00000020984)	BHMT (ENSPTIG00000020191)	JMY (ENSPTIG00000019858)
Caniformia	ANCESTRAL SPECIES	5	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Ursidae	ANCESTRAL SPECIES	16	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a	ENSGT00940000156354
Ursus	ANCESTRAL SPECIES	3	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00950000182901.a.a.b.a.b.b	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Polar bear	MODERN SPECIES	173	ENSUMAG00000007325 #7	FAM169A (ENSUMAG00000007308) #9	GCNT4 (ENSUMAG00000007290) #10	ENSUMAG00000007284 #11	ENSUMAG00000007271	HMGCR (ENSUMAG00000007258) #12	CERT1 (ENSUMAG00000007238) #13	POLK (ENSUMAG00000007228) #14	ENSUMAG00000007224	ANKDD1B (ENSUMAG00000007210) #15	POC5 (ENSUMAG00000007198) #16	SV2C (ENSUMAG00000007138) #18	F2RL2 (ENSUMAG00000007111) #19	IQGAP2 (ENSUMAG00000005302) #20	F2R (ENSUMAG00000005082) #21	F2RL1 (ENSUMAG00000005075) #22	CRHBP (ENSUMAG00000005059) #24	AGGF1 (ENSUMAG00000005048) #25	ENSUMAG00000005026	PDE8B (ENSUMAG00000004797) #27	WDR41 (ENSUMAG00000004705) #28	ENSUMAG00000004694	AP3B1 (ENSUMAG00000004124) #31
American black bear	MODERN SPECIES	6652																F2RL1 (ENSUAMG00000004528) #22
Giant Panda	MODERN SPECIES	13	GFM2 (ENSAMEG00000000544)	ENSAMEG00000000593 #7	FAM169A (ENSAMEG00000000608) #9	GCNT4 (ENSAMEG00000029130) #10	ENSAMEG00000000627 #11	ENSAMEG00000030480	HMGCR (ENSAMEG00000000634) #12	CERT1 (ENSAMEG00000000701) #13	POLK (ENSAMEG00000000744) #14	ANKDD1B (ENSAMEG00000000782) #15	POC5 (ENSAMEG00000000800) #16	SV2C (ENSAMEG00000000836) #18	IQGAP2 (ENSAMEG00000001638) #20	F2RL2 (ENSAMEG00000001805) #19	F2R (ENSAMEG00000018602) #21	F2RL1 (ENSAMEG00000001809) #22	CRHBP (ENSAMEG00000001817) #24	AGGF1 (ENSAMEG00000001833) #25	PDE8B (ENSAMEG00000005971) #27	ENSAMEG00000028764	WDR41 (ENSAMEG00000005933) #28	OTP (ENSAMEG00000028076) #29	TBCA (ENSAMEG00000027837) #30	AP3B1 (ENSAMEG00000005816) #31	SCAMP1 (ENSAMEG00000005799) #33	LHFPL2 (ENSAMEG00000005794) #34	ARSB (ENSAMEG00000005783) #36	DMGDH (ENSAMEG00000005739) #37	BHMT2 (ENSAMEG00000005719)	BHMT (ENSAMEG00000005696)	JMY (ENSAMEG00000015594)
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00550000074890	ENSGT00390000018706.n ##7	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.g #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000153593.c.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
American mink	MODERN SPECIES	112												SV2C (ENSNVIG00000003066) #18	PAR3 (ENSNVIG00000003032) #19	IQGAP2 (ENSNVIG00000002874) #20	F2R (ENSNVIG00000002863) #21	F2RL1 (ENSNVIG00000002854) #22	CRHBP (ENSNVIG00000002829) #24	AGGF1 (ENSNVIG00000002783) #25	ZBED3 (ENSNVIG00000002773) #26	ENSNVIG00000002723 #27	WDR41 (ENSNVIG00000002651) #28	OTP (ENSNVIG00000002637) #29	TBCA (ENSNVIG00000002606) #30	ENSNVIG00000002585	AP3B1 (ENSNVIG00000002504) #31	SCAMP1 (ENSNVIG00000002476) #33	LHPL2 (ENSNVIG00000002454) #34	ARSB (ENSNVIG00000002402) #36	DMGDH (ENSNVIG00000002369) #37	BHMT (ENSNVIG00000002335)	ENSNVIG00000002323
Ferret	MODERN SPECIES	286	ENSMPUG00000005795 #7	FAM169A (ENSMPUG00000005788) #9	GFM2 (ENSMPUG00000005688)	GCNT4 (ENSMPUG00000018801) #10	ENSMPUG00000005681 #11	ENSMPUG00000005678 #11	HMGCR (ENSMPUG00000005662) #12	CERT1 (ENSMPUG00000005653) #13	POLK (ENSMPUG00000005641) #14	ANKDD1B (ENSMPUG00000005630) #15	POC5 (ENSMPUG00000005619) #16	SV2C (ENSMPUG00000005606) #18	F2RL2 (ENSMPUG00000005597) #19	IQGAP2 (ENSMPUG00000005569) #20	F2R (ENSMPUG00000005558) #21	F2RL1 (ENSMPUG00000005551) #22	CRHBP (ENSMPUG00000005538) #24	AGGF1 (ENSMPUG00000005518) #25	PDE8B (ENSMPUG00000005262) #27	WDR41 (ENSMPUG00000005197) #28	ENSMPUG00000018800	OTP (ENSMPUG00000005191) #29	ENSMPUG00000005179	ENSMPUG00000018799	ENSMPUG00000005174	AP3B1 (ENSMPUG00000005160) #31	SCAMP1 (ENSMPUG00000005152) #33	LHFPL2 (ENSMPUG00000005146) #34	ARSB (ENSMPUG00000005100) #36	DMGDH (ENSMPUG00000005093) #37	BHMT (ENSMPUG00000005014)
Canidae	ANCESTRAL SPECIES	52	ENSGT01090000260006.A.c.a.b.a.l	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.b.a	ENSGT01090000260011.A.c.a.a.a.a	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00940000165518	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.b.a	ENSGT01090000260011.A.c.a.a.a.a	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00940000165518	ENSGT00950000182940.b.b #18	ENSGT00490000043329.a.a.a.pb.b.a.a	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000162210.m.b	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Dog	MODERN SPECIES	22	OR6C1K (ENSCAFG00845012419)	OR6C85 (ENSCAFG00845012411)	OR6C63 (ENSCAFG00845012396)	ENSCAFG00845012365 #10	ENSCAFG00845012043	HMGCR (ENSCAFG00845011849) #12	CERT1 (ENSCAFG00845011641) #13	POLK (ENSCAFG00845011326) #14	POC5 (ENSCAFG00845011018) #16	ENSCAFG00845010968	SV2C (ENSCAFG00845010918) #18	ENSCAFG00845010892	F2RL2 (ENSCAFG00845010868) #19	IQGAP2 (ENSCAFG00845010426) #20	F2R (ENSCAFG00845010276) #21	F2RL1 (ENSCAFG00845010229) #22	CRHBP (ENSCAFG00845010170) #24	AGGF1 (ENSCAFG00845010001) #25	ZBED3 (ENSCAFG00845009893) #26	PDE8B (ENSCAFG00845009245) #27	WDR41 (ENSCAFG00845008881) #28	OTP (ENSCAFG00845008819) #29	TBCA (ENSCAFG00845008735) #30	AP3B1 (ENSCAFG00845008344) #31	ENSCAFG00845008191	SCAMP1 (ENSCAFG00845008131) #33	ENSCAFG00845008040 #34	ENSCAFG00845007955	ENSCAFG00845007889	ARSB (ENSCAFG00845007767) #36	DMGDH (ENSCAFG00845007613) #37
Dingo	MODERN SPECIES	138	ENSCAFG00020024903	ENSCAFG00020024905	GCNT4 (ENSCAFG00020024910) #10	ENSCAFG00020024911 #11	ENSCAFG00020024915	HMGCR (ENSCAFG00020024948) #12	CERT1 (ENSCAFG00020025372) #13	POLK (ENSCAFG00020025589) #14	POC5 (ENSCAFG00020025700) #16	ENSCAFG00020025705	SV2C (ENSCAFG00020025712) #18	IQGAP2 (ENSCAFG00020025766) #20	ENSCAFG00020025957	F2RL2 (ENSCAFG00020025959) #19	F2R (ENSCAFG00020025967) #21	F2RL1 (ENSCAFG00020025974) #22	CRHBP (ENSCAFG00020025980) #24	AGGF1 (ENSCAFG00020025988) #25	ENSCAFG00020025990 #26	PDE8B (ENSCAFG00020026022) #27	WDR41 (ENSCAFG00020026182) #28	OTP (ENSCAFG00020026185) #29	TBCA (ENSCAFG00020026187) #30	AP3B1 (ENSCAFG00020026199) #31	SCAMP1 (ENSCAFG00020026258) #33	LHFPL2 (ENSCAFG00020026266) #34	ENSCAFG00020026271	ENSCAFG00020026272	ENSCAFG00020026273	ARSB (ENSCAFG00020026275) #36	DMGDH (ENSCAFG00020026278) #37
Red fox	MODERN SPECIES	27	ENSVVUG00000025234	GCNT4 (ENSVVUG00000025231) #10	ENSVVUG00000025226	ANKRD31 (ENSVVUG00000025202)	HMGCR (ENSVVUG00000025191) #12	COL4A3BP (ENSVVUG00000025182) #13	POLK (ENSVVUG00000025177) #14	POC5 (ENSVVUG00000025166) #16	ENSVVUG00000025164	ENSVVUG00000025163	SV2C (ENSVVUG00000025157) #18	ENSVVUG00000025148	F2RL2 (ENSVVUG00000025145) #19	IQGAP2 (ENSVVUG00000025132) #20	F2R (ENSVVUG00000025128) #21	F2RL1 (ENSVVUG00000025124) #22	CRHBP (ENSVVUG00000025121) #24	AGGF1 (ENSVVUG00000025114) #25	PDE8B (ENSVVUG00000025106) #27	WDR41 (ENSVVUG00000025096) #28	OTP (ENSVVUG00000025094) #29	ENSVVUG00000025093	AP3B1 (ENSVVUG00000025056) #31	SCAMP1 (ENSVVUG00000025046) #33	LHFPL2 (ENSVVUG00000025039) #34	ENSVVUG00000025030	BHMT (ENSVVUG00000025022)	BHMT2 (ENSVVUG00000025018)	DMGDH (ENSVVUG00000025013) #37	JMY (ENSVVUG00000024988)	HOMER1 (ENSVVUG00000024979)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Greater horseshoe bat	MODERN SPECIES	25	HEXB (ENSRFEG00010012089)	GFM2 (ENSRFEG00010012225)	ENSRFEG00010012400 #7	FAM169A (ENSRFEG00010012573) #9	GCNT4 (ENSRFEG00010012676) #10	ANKRD31 (ENSRFEG00010012703) #11	HMGCR (ENSRFEG00010013017) #12	CERT1 (ENSRFEG00010013140) #13	POLK (ENSRFEG00010013650) #14	ANKDD1B (ENSRFEG00010013842) #15	POC5 (ENSRFEG00010014089) #16	SV2C (ENSRFEG00010014249) #18	IQGAP2 (ENSRFEG00010014371) #20	F2RL2 (ENSRFEG00010015786) #19	F2R (ENSRFEG00010015825) #21	F2RL1 (ENSRFEG00010015917) #22	CRHBP (ENSRFEG00010015859) #24	S100Z (ENSRFEG00010015950) #23	AGGF1 (ENSRFEG00010016035) #25	ZBED3 (ENSRFEG00010016086) #26	PDE8B (ENSRFEG00010016179) #27	WDR41 (ENSRFEG00010017690) #28	OTP (ENSRFEG00010017860) #29	TBCA (ENSRFEG00010017900) #30	AP3B1 (ENSRFEG00010018051) #31	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #33	LHFPL2 (ENSRFEG00010018294) #34	ARSB (ENSRFEG00010018336) #36	DMGDH (ENSRFEG00010018532) #37
Megabat	MODERN SPECIES	259												SV2C (ENSPVAG00000009721) #18	IQGAP2 (ENSPVAG00000009723) #20	F2RL2 (ENSPVAG00000009726) #19	F2R (ENSPVAG00000009728) #21	F2RL1 (ENSPVAG00000009729) #22	S100Z (ENSPVAG00000009731) #23	CRHBP (ENSPVAG00000009732) #24	AGGF1 (ENSPVAG00000009733) #25
Equus	ANCESTRAL SPECIES	6	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Donkey	MODERN SPECIES	29	HEXB (ENSEASG00005018246)	GFM2 (ENSEASG00005018285)	ENSEASG00005018414 #7	FAM169A (ENSEASG00005018417) #9	GCNT4 (ENSEASG00005037231) #10	ANKRD31 (ENSEASG00005018424) #11	HMGCR (ENSEASG00005018428) #12	CERT1 (ENSEASG00005018435) #13	POLK (ENSEASG00005018442) #14	ANKDD1B (ENSEASG00005035528) #15	POC5 (ENSEASG00005018452) #16	SV2C (ENSEASG00005018455) #18	F2RL2 (ENSEASG00005036850) #19	IQGAP2 (ENSEASG00005000244) #20	F2R (ENSEASG00005037330) #21	F2RL1 (ENSEASG00005001812) #22	S100Z (ENSEASG00005001816) #23	CRHBP (ENSEASG00005001822) #24	AGGF1 (ENSEASG00005001829) #25	ZBED3 (ENSEASG00005034455) #26	PDE8B (ENSEASG00005001845) #27	WDR41 (ENSEASG00005001862) #28	OTP (ENSEASG00005001863) #29	ENSEASG00005032921	ENSEASG00005028729 #30	AP3B1 (ENSEASG00005001889) #31	SCAMP1 (ENSEASG00005001900) #33	LHFPL2 (ENSEASG00005001904) #34	ARSB (ENSEASG00005001910) #36	DMGDH (ENSEASG00005001920) #37	BHMT2 (ENSEASG00005001941)
Horse	MODERN SPECIES	5	ENC1 (ENSECAG00000016706)	HEXB (ENSECAG00000011657)	GFM2 (ENSECAG00000006640)	NSA2 (ENSECAG00000005528) #7	FAM169A (ENSECAG00000024132) #9	GCNT4 (ENSECAG00000005515) #10	ANKRD31 (ENSECAG00000024123) #11	HMGCR (ENSECAG00000021330) #12	CERT1 (ENSECAG00000017349) #13	POLK (ENSECAG00000014876) #14	ANKDD1B (ENSECAG00000014521) #15	POC5 (ENSECAG00000013824) #16	SV2C (ENSECAG00000010569) #18	F2RL2 (ENSECAG00000010531) #19	IQGAP2 (ENSECAG00000004274) #20	F2RL1 (ENSECAG00000002867) #22	S100Z (ENSECAG00000000977) #23	F2R (ENSECAG00000004055) #21	CRHBP (ENSECAG00000017949) #24	ZBED3 (ENSECAG00000040464) #26	PDE8B (ENSECAG00000012189) #27	WDR41 (ENSECAG00000009496) #28	OTP (ENSECAG00000009423) #29	TBCA (ENSECAG00000009383) #30	AP3B1 (ENSECAG00000022849) #31	SCAMP1 (ENSECAG00000021921) #33	LHFPL2 (ENSECAG00000021890) #34	ARSB (ENSECAG00000020847) #36	BHMT2 (ENSECAG00000018440)	DMGDH (ENSECAG00000019851) #37	BHMT (ENSECAG00000015626)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Suina	ANCESTRAL SPECIES	11	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.f #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Pig	MODERN SPECIES	10	FAM169A (ENSSSCG00000014076) #9	GCNT4 (ENSSSCG00000029710) #10	ENSSSCG00000014078	ANKRD31 (ENSSSCG00000014079) #11	HMGCR (ENSSSCG00000014080) #12	CERT1 (ENSSSCG00000014081) #13	ENSSSCG00000058855	POLK (ENSSSCG00000014082) #14	ANKDD1B (ENSSSCG00000014083) #15	POC5 (ENSSSCG00000014084) #16	SV2C (ENSSSCG00000034062) #18	IQGAP2 (ENSSSCG00000014088) #20	ENSSSCG00000045040	F2RL2 (ENSSSCG00000037582) #19	F2R (ENSSSCG00000035355) #21	F2RL1 (ENSSSCG00000014091) #22	S100Z (ENSSSCG00000014092) #23	CRHBP (ENSSSCG00000014093) #24	AGGF1 (ENSSSCG00000014094) #25	ENSSSCG00000050058	PDE8B (ENSSSCG00000014097) #27	ENSSSCG00000014096	ENSSSCG00000051837 #28	ENSSSCG00000014098 #28	OTP (ENSSSCG00000014099) #29	TBCA (ENSSSCG00000014100) #30	ENSSSCG00000034241	AP3B1 (ENSSSCG00000014101) #31	SCAMP1 (ENSSSCG00000034795) #33	LHFPL2 (ENSSSCG00000028536) #34	ARSB (ENSSSCG00000038535) #36
Chacoan peccary	MODERN SPECIES	204							HMGCR (ENSCWAG00000003368) #12	CERT1 (ENSCWAG00000003403) #13	POLK (ENSCWAG00000003477) #14	ANKDD1B (ENSCWAG00000003540) #15	POC5 (ENSCWAG00000003563) #16	SV2C (ENSCWAG00000003605) #18	IQGAP2 (ENSCWAG00000003644) #20	F2RL2 (ENSCWAG00000007970) #19	F2R (ENSCWAG00000008004) #21	F2RL1 (ENSCWAG00000008039) #22	ENSCWAG00000008077 #23	CRHBP (ENSCWAG00000008117) #24	AGGF1 (ENSCWAG00000008243) #25	ZBED3 (ENSCWAG00000008305) #26	PDE8B (ENSCWAG00000008441) #27	WDR41 (ENSCWAG00000010043) #28	OTP (ENSCWAG00000010193) #29	TBCA (ENSCWAG00000010250) #30	AP3B1 (ENSCWAG00000010356) #31	SCAMP1 (ENSCWAG00000010485) #33	LHFPL2 (ENSCWAG00000010566) #34	ARSB (ENSCWAG00000010599) #36	DMGDH (ENSCWAG00000010632) #37	BHMT2 (ENSCWAG00000010749)	BHMT (ENSCWAG00000010882)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Camelidae	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00390000018706.n ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Arabian camel	MODERN SPECIES	22	GFM2 (ENSCDRG00005002671)	ENSCDRG00005002639 ##7	FAM169A (ENSCDRG00005002601) #9	ENSCDRG00005002592	GCNT4 (ENSCDRG00005002583) #10	ANKRD31 (ENSCDRG00005002546) #11	HMGCR (ENSCDRG00005002491) #12	CERT1 (ENSCDRG00005001455) #13	POLK (ENSCDRG00005001206) #14	ANKDD1B (ENSCDRG00005001160) #15	POC5 (ENSCDRG00005001127) #16	SV2C (ENSCDRG00005001113) #18	F2RL2 (ENSCDRG00005001095) #19	IQGAP2 (ENSCDRG00005000766) #20	F2R (ENSCDRG00005000707) #21	F2RL1 (ENSCDRG00005000688) #22	S100Z (ENSCDRG00005000678) #23	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645) #24	AGGF1 (ENSCDRG00005000618) #25	ZBED3 (ENSCDRG00005000608) #26	PDE8B (ENSCDRG00005000565) #27	WDR41 (ENSCDRG00005000509) #28	OTP (ENSCDRG00005000470) #29	TBCA (ENSCDRG00005000444) #30	AP3B1 (ENSCDRG00005000366) #31	SCAMP1 (ENSCDRG00005000299) #33	LHFPL2 (ENSCDRG00005000275) #34	ARSB (ENSCDRG00005000234) #36	DMGDH (ENSCDRG00005000085) #37	BHMT2 (ENSCDRG00005000037)
Alpaca	MODERN SPECIES	5935																F2RL1 (ENSVPAG00000001070) #22	ENSVPAG00000001069 #23
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Pecora	ANCESTRAL SPECIES	6	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Percora_a	ANCESTRAL SPECIES	8	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Bovidae	ANCESTRAL SPECIES	7	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Bovinae	ANCESTRAL SPECIES	33	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.j	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Bos	ANCESTRAL SPECIES	31	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Bos_a	ANCESTRAL SPECIES	26	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Wild yak	MODERN SPECIES	297					GCNT4 (ENSBMUG00000012260) #10	ANKRD31 (ENSBMUG00000012237) #11	HMGCR (ENSBMUG00000012171) #12	CERT1 (ENSBMUG00000011873) #13	POLK (ENSBMUG00000011634) #14	POC5 (ENSBMUG00000011568) #16	SV2C (ENSBMUG00000011496) #18	ENSBMUG00000011462	F2RL2 (ENSBMUG00000011445) #19	IQGAP2 (ENSBMUG00000011350) #20	F2R (ENSBMUG00000011164) #21	F2RL1 (ENSBMUG00000011152) #22	S100Z (ENSBMUG00000011148) #23	AGGF1 (ENSBMUG00000011125) #25	PDE8B (ENSBMUG00000011054) #27	WDR41 (ENSBMUG00000010747) #28	OTP (ENSBMUG00000010682) #29	TBCA (ENSBMUG00000010673) #30	ENSBMUG00000010660	ENSBMUG00000010637
Domestic yak	MODERN SPECIES	2	ENSBGRG00000011575	SFXN1 (ENSBGRG00000011347)	DRD1 (ENSBGRG00000011292)	GCNT4 (ENSBGRG00000011247) #10	ENSBGRG00000011228	ANKRD31 (ENSBGRG00000010828) #11	HMGCR (ENSBGRG00000010597) #12	CERT1 (ENSBGRG00000009779) #13	POLK (ENSBGRG00000009306) #14	POC5 (ENSBGRG00000008737) #16	SV2C (ENSBGRG00000008621) #18	ENSBGRG00000008593	F2RL2 (ENSBGRG00000008567) #19	IQGAP2 (ENSBGRG00000007931) #20	F2R (ENSBGRG00000007892) #21	F2RL1 (ENSBGRG00000007822) #22	ENSBGRG00000007803	S100Z (ENSBGRG00000007761) #23	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412) #25	ZBED3 (ENSBGRG00000007380) #26	PDE8B (ENSBGRG00000006555) #27	WDR41 (ENSBGRG00000006363) #28	OTP (ENSBGRG00000006298) #29	TBCA (ENSBGRG00000006236) #30	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #31	SCAMP1 (ENSBGRG00000005900) #33	LHFPL2 (ENSBGRG00000005875) #34	ENSBGRG00000005848	ARSB (ENSBGRG00000005773) #36
Bos_b	ANCESTRAL SPECIES	28	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cow	MODERN SPECIES	1	CPLX2 (ENSBTAG00000054924)	HRH2 (ENSBTAG00000044071)	SFXN1 (ENSBTAG00000014536)	DRD1 (ENSBTAG00000047719)	GCNT4 (ENSBTAG00000050091) #10	ANKRD31 (ENSBTAG00000024878) #11	HMGCR (ENSBTAG00000007840) #12	CERT1 (ENSBTAG00000000081) #13	POLK (ENSBTAG00000004028) #14	POC5 (ENSBTAG00000007114) #16	SV2C (ENSBTAG00000017507) #18	ENSBTAG00000052974	IQGAP2 (ENSBTAG00000000897) #20	F2RL2 (ENSBTAG00000000898) #19	F2R (ENSBTAG00000020199) #21	F2RL1 (ENSBTAG00000034848) #22	S100Z (ENSBTAG00000020201) #23	CRHBP (ENSBTAG00000020202) #24	AGGF1 (ENSBTAG00000034823) #25	ZBED3 (ENSBTAG00000052845) #26	PDE8B (ENSBTAG00000020205) #27	WDR41 (ENSBTAG00000020212) #28	OTP (ENSBTAG00000009249) #29	TBCA (ENSBTAG00000003263) #30	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #31	SCAMP1 (ENSBTAG00000007371) #33	LHFPL2 (ENSBTAG00000007374) #34	ARSB (ENSBTAG00000008341) #36	DMGDH (ENSBTAG00000002110) #37	BHMT2 (ENSBTAG00000038234)
American bison	MODERN SPECIES	3169	ENSBBBG00000005947	ENSBBBG00000005945	ENSBBBG00000022510	GCNT4 (ENSBBBG00000005939) #10	ANKRD31 (ENSBBBG00000022499) #11	HMGCR (ENSBBBG00000005907) #12	CERT1 (ENSBBBG00000022291) #13	POLK (ENSBBBG00000021965) #14	ANKDD1B (ENSBBBG00000008030) #15	POC5 (ENSBBBG00000021773) #16	SV2C (ENSBBBG00000006918) #18	ENSBBBG00000021689	IQGAP2 (ENSBBBG00000021677) #20	F2RL2 (ENSBBBG00000021481) #19	F2R (ENSBBBG00000021478) #21	F2RL1 (ENSBBBG00000021471) #22	S100Z (ENSBBBG00000021469) #23	CRHBP (ENSBBBG00000021464) #24	AGGF1 (ENSBBBG00000021443) #25	PDE8B (ENSBBBG00000021396) #27	WDR41 (ENSBBBG00000021018) #28	TBCA (ENSBBBG00000005639) #30	ENSBBBG00000005636	AP3B1 (ENSBBBG00000005629) #31	SCAMP1 (ENSBBBG00000020857) #33	LHFPL2 (ENSBBBG00000020821) #34	ARSB (ENSBBBG00000020814) #36
Caprinae	ANCESTRAL SPECIES	30	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Goat	MODERN SPECIES	1	HRH2 (ENSCHIG00000022097)	SFXN1 (ENSCHIG00000022473)	DRD1 (ENSCHIG00000024371)	ENSCHIG00000015735	GCNT4 (ENSCHIG00000008602) #10	ENSCHIG00000021264 #11	HMGCR (ENSCHIG00000015556) #12	CERT1 (ENSCHIG00000021950) #13	POLK (ENSCHIG00000008105) #14	ENSCHIG00000008486	POC5 (ENSCHIG00000009080) #16	SV2C (ENSCHIG00000016655) #18	F2RL2 (ENSCHIG00000002096) #19	IQGAP2 (ENSCHIG00000020854) #20	F2R (ENSCHIG00000022474) #21	F2RL1 (ENSCHIG00000026366) #22	S100Z (ENSCHIG00000018486) #23	CRHBP (ENSCHIG00000024251) #24	AGGF1 (ENSCHIG00000012662) #25	ZBED3 (ENSCHIG00000004171) #26	PDE8B (ENSCHIG00000023152) #27	WDR41 (ENSCHIG00000023139) #28	OTP (ENSCHIG00000018904) #29	TBCA (ENSCHIG00000021233) #30	AP3B1 (ENSCHIG00000018755) #31	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #33	LHFPL2 (ENSCHIG00000014180) #34	ARSB (ENSCHIG00000001349) #36	DMGDH (ENSCHIG00000021924) #37	BHMT2 (ENSCHIG00000027021)
Rambouillet Sheep	MODERN SPECIES	23	THOC3 (ENSOARG00020020205)	CPLX2 (ENSOARG00020020263)	HRH2 (ENSOARG00020020329)	SFXN1 (ENSOARG00020020382)	ENSOARG00020020572	GCNT4 (ENSOARG00020020622) #10	ENSOARG00020020636 #11	HMGCR (ENSOARG00020020760) #12	CERT1 (ENSOARG00020020967) #13	POLK (ENSOARG00020021498) #14	POC5 (ENSOARG00020021712) #16	SV2C (ENSOARG00020021763) #18	IQGAP2 (ENSOARG00020021962) #20	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #21	F2RL1 (ENSOARG00020023002) #22	S100Z (ENSOARG00020023021) #23	CRHBP (ENSOARG00020023047) #24	AGGF1 (ENSOARG00020023108) #25	ZBED3 (ENSOARG00020023150) #26	PDE8B (ENSOARG00020023251) #27	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #28	OTP (ENSOARG00020024451) #29	TBCA (ENSOARG00020024464) #30	AP3B1 (ENSOARG00020024527) #31	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #33	ENSOARG00020024626 #23	LHFPL2 (ENSOARG00020024639) #34	ARSB (ENSOARG00020002992) #36
Siberian musk deer	MODERN SPECIES	69	HRH2 (ENSMMSG00000014518)	SFXN1 (ENSMMSG00000014529)	DRD1 (ENSMMSG00000014544)	ENSMMSG00000014552	ENSMMSG00000014567	GCNT4 (ENSMMSG00000014582) #10	ANKRD31 (ENSMMSG00000014614) #11	HMGCR (ENSMMSG00000014812) #12	CERT1 (ENSMMSG00000014921) #13	POLK (ENSMMSG00000015182) #14	POC5 (ENSMMSG00000015294) #16	SV2C (ENSMMSG00000015327) #18	IQGAP2 (ENSMMSG00000015431) #20	F2RL2 (ENSMMSG00000015650) #19	F2R (ENSMMSG00000015666) #21	F2RL1 (ENSMMSG00000015677) #22	S100Z (ENSMMSG00000015687) #23	CRHBP (ENSMMSG00000015697) #24	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751) #25	ZBED3 (ENSMMSG00000015777) #26	PDE8B (ENSMMSG00000015917) #27	WDR41 (ENSMMSG00000017180) #28	OTP (ENSMMSG00000017274) #29	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #31	SCAMP1 (ENSMMSG00000017674) #33	LHFPL2 (ENSMMSG00000017736) #34	ARSB (ENSMMSG00000017759) #36	DMGDH (ENSMMSG00000017858) #37
Yarkand deer	MODERN SPECIES	3	CPLX2 (ENSCHYG00000005163)	HRH2 (ENSCHYG00000005212)	SFXN1 (ENSCHYG00000005262)	DRD1 (ENSCHYG00000005319)	GCNT4 (ENSCHYG00000005367) #10	ANKRD31 (ENSCHYG00000005425) #11	HMGCR (ENSCHYG00000005715) #12	CERT1 (ENSCHYG00000005851) #13	POLK (ENSCHYG00000006041) #14	POC5 (ENSCHYG00000006247) #16	SV2C (ENSCHYG00000006307) #18	IQGAP2 (ENSCHYG00000006385) #20	F2RL2 (ENSCHYG00000006675) #19	F2R (ENSCHYG00000006697) #21	ENSCHYG00000006719	F2RL1 (ENSCHYG00000006741) #22	S100Z (ENSCHYG00000006771) #23	CRHBP (ENSCHYG00000006799) #24	AGGF1 (ENSCHYG00000006866) #25	ZBED3 (ENSCHYG00000006906) #26	ENSCHYG00000006937	ENSCHYG00000006952	ENSCHYG00000006962 #27	ENSCHYG00000007028 #27	WDR41 (ENSCHYG00000007090) #28	OTP (ENSCHYG00000007305) #29	TBCA (ENSCHYG00000007320) #30	ENSCHYG00000007338	ENSCHYG00000007344	ENSCHYG00000007356	AP3B1 (ENSCHYG00000007402) #31
Cetacea	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Narwhal	MODERN SPECIES	298	GFM2 (ENSMMNG00015006841)	ENSMMNG00015006875 #7	FAM169A (ENSMMNG00015006911) #9	GCNT4 (ENSMMNG00015006954) #10	ANKRD31 (ENSMMNG00015007010) #11	HMGCR (ENSMMNG00015007107) #12	CERT1 (ENSMMNG00015007218) #13	POLK (ENSMMNG00015007374) #14	ANKDD1B (ENSMMNG00015007467) #15	POC5 (ENSMMNG00015007540) #16	SV2C (ENSMMNG00015007600) #18	ENSMMNG00015007640	IQGAP2 (ENSMMNG00015007731) #20	F2RL2 (ENSMMNG00015007923) #19	F2R (ENSMMNG00015007933) #21	F2RL1 (ENSMMNG00015007943) #22	S100Z (ENSMMNG00015007958) #23	CRHBP (ENSMMNG00015007977) #24	AGGF1 (ENSMMNG00015008009) #25	ZBED3 (ENSMMNG00015008041) #26	PDE8B (ENSMMNG00015008112) #27	WDR41 (ENSMMNG00015008176) #28	OTP (ENSMMNG00015008215) #29	TBCA (ENSMMNG00015008230) #30	AP3B1 (ENSMMNG00015008260) #31	SCAMP1 (ENSMMNG00015008303) #33	LHFPL2 (ENSMMNG00015008328) #34	ARSB (ENSMMNG00015008346) #36	DMGDH (ENSMMNG00015008374) #37	BHMT2 (ENSMMNG00015008393)	BHMT (ENSMMNG00015008415)
Beluga whale	MODERN SPECIES	71	GFM2 (ENSDLEG00000008794)	NSA2 (ENSDLEG00000008766) #7	FAM169A (ENSDLEG00000008731) #9	GCNT4 (ENSDLEG00000008712) #10	ANKRD31 (ENSDLEG00000008542) #11	HMGCR (ENSDLEG00000008447) #12	COL4A3BP (ENSDLEG00000008328) #13	POLK (ENSDLEG00000008261) #14	POC5 (ENSDLEG00000008196) #16	ENSDLEG00000008154	SV2C (ENSDLEG00000008107) #18	ENSDLEG00000008092	F2RL2 (ENSDLEG00000008080) #19	IQGAP2 (ENSDLEG00000008039) #20	F2R (ENSDLEG00000008028) #21	F2RL1 (ENSDLEG00000008016) #22	S100Z (ENSDLEG00000008008) #23	CRHBP (ENSDLEG00000007986) #24	AGGF1 (ENSDLEG00000007958) #25	ZBED3 (ENSDLEG00000007936) #26	PDE8B (ENSDLEG00000015062) #27	WDR41 (ENSDLEG00000014960) #28	OTP (ENSDLEG00000014945) #29	TBCA (ENSDLEG00000014906) #30	AP3B1 (ENSDLEG00000014741) #31	SCAMP1 (ENSDLEG00000014708) #33	LHFPL2 (ENSDLEG00000014699) #34	ARSB (ENSDLEG00000014686) #36	DMGDH (ENSDLEG00000014641) #37	BHMT2 (ENSDLEG00000014617)	BHMT (ENSDLEG00000014599)
Vaquita	MODERN SPECIES	14	HEXB (ENSPSNG00000006550)	GFM2 (ENSPSNG00000006458)	ENSPSNG00000006396 #7	FAM169A (ENSPSNG00000006255) #9	GCNT4 (ENSPSNG00000006178) #10	ANKRD31 (ENSPSNG00000006120) #11	HMGCR (ENSPSNG00000006005) #12	CERT1 (ENSPSNG00000005809) #13	POLK (ENSPSNG00000005609) #14	POC5 (ENSPSNG00000005438) #16	ENSPSNG00000005362	SV2C (ENSPSNG00000005309) #18	F2RL2 (ENSPSNG00000005286) #19	IQGAP2 (ENSPSNG00000005144) #20	F2R (ENSPSNG00000005065) #21	F2RL1 (ENSPSNG00000005843) #22	S100Z (ENSPSNG00000005821) #23	CRHBP (ENSPSNG00000005773) #24	AGGF1 (ENSPSNG00000005724) #25	ZBED3 (ENSPSNG00000005710) #26	PDE8B (ENSPSNG00000005114) #27	WDR41 (ENSPSNG00000004776) #28	OTP (ENSPSNG00000004725) #29	TBCA (ENSPSNG00000004666) #30	AP3B1 (ENSPSNG00000004553) #31	SCAMP1 (ENSPSNG00000004447) #33	LHFPL2 (ENSPSNG00000004403) #34	ARSB (ENSPSNG00000004356) #36	DMGDH (ENSPSNG00000004287) #37	BHMT2 (ENSPSNG00000004227)	BHMT (ENSPSNG00000004175)
Dolphin	MODERN SPECIES	4085																F2RL1 (ENSTTRG00000003616) #22
Sperm whale	MODERN SPECIES	19	GFM2 (ENSPCTG00005001720)	NSA2 (ENSPCTG00005001800) #7	FAM169A (ENSPCTG00005001823) #9	ENSPCTG00005001839	GCNT4 (ENSPCTG00005001860) #10	ANKRD31 (ENSPCTG00005001908) #11	HMGCR (ENSPCTG00005002015) #12	COL4A3BP (ENSPCTG00005002102) #13	POLK (ENSPCTG00005002299) #14	POC5 (ENSPCTG00005002372) #16	SV2C (ENSPCTG00005002439) #18	IQGAP2 (ENSPCTG00005002535) #20	F2RL2 (ENSPCTG00005002767) #19	ENSPCTG00005002778	F2R (ENSPCTG00005002792) #21	F2RL1 (ENSPCTG00005002799) #22	S100Z (ENSPCTG00005002807) #23	AGGF1 (ENSPCTG00005002832) #25	ZBED3 (ENSPCTG00005002866) #26	PDE8B (ENSPCTG00005002983) #27	WDR41 (ENSPCTG00005003516) #28	OTP (ENSPCTG00005003577) #29	TBCA (ENSPCTG00005003597) #30	AP3B1 (ENSPCTG00005003664) #31	SCAMP1 (ENSPCTG00005003758) #33	LHFPL2 (ENSPCTG00005003792) #34	ARSB (ENSPCTG00005003811) #36	DMGDH (ENSPCTG00005003853) #37	BHMT (ENSPCTG00005003876)	JMY (ENSPCTG00005003899)	HOMER1 (ENSPCTG00005003925)
Blue whale	MODERN SPECIES	14	GFM2 (ENSBMSG00010004689)	ENSBMSG00010004702 #7	ENSBMSG00010004714 #9	ENSBMSG00010004732	GCNT4 (ENSBMSG00010004754) #10	ANKRD31 (ENSBMSG00010004774) #11	HMGCR (ENSBMSG00010004832) #12	CERT1 (ENSBMSG00010004912) #13	POLK (ENSBMSG00010005438) #14	POC5 (ENSBMSG00010005501) #16	SV2C (ENSBMSG00010005531) #18	ENSBMSG00010005549	IQGAP2 (ENSBMSG00010005591) #20	F2RL2 (ENSBMSG00010005686) #19	F2R (ENSBMSG00010005694) #21	F2RL1 (ENSBMSG00010005699) #22	S100Z (ENSBMSG00010005711) #23	CRHBP (ENSBMSG00010005714) #24	AGGF1 (ENSBMSG00010005734) #25	ZBED3 (ENSBMSG00010005760) #26	PDE8B (ENSBMSG00010005858) #27	WDR41 (ENSBMSG00010006297) #28	OTP (ENSBMSG00010006319) #29	ENSBMSG00010006335 #30	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #31	SCAMP1 (ENSBMSG00010006378) #33	LHFPL2 (ENSBMSG00010006395) #34	ARSB (ENSBMSG00010006407) #36	DMGDH (ENSBMSG00010006427) #37	BHMT2 (ENSBMSG00010006453)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a #22
Common shrew	MODERN SPECIES	4484																F2RL1 (ENSSARG00000000095) #22
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Primates	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Pan	ANCESTRAL SPECIES	21	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00950000182878.b.a.c.a.a.b.i.b	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000044567	GCNT4 (ENSPTRG00000040943) #10	ANKRD31 (ENSPTRG00000016993) #11	HMGCR (ENSPTRG00000016994) #12	CERT1 (ENSPTRG00000016996) #13	POLK (ENSPTRG00000016997) #14	ANKDD1B (ENSPTRG00000016998) #15	POC5 (ENSPTRG00000016999) #16	ENSPTRG00000051331	ENSPTRG00000044990	SV2C (ENSPTRG00000017000) #18	ENSPTRG00000046035	F2RL2 (ENSPTRG00000017003) #19	IQGAP2 (ENSPTRG00000017002) #20	F2R (ENSPTRG00000017004) #21	F2RL1 (ENSPTRG00000017005) #22	S100Z (ENSPTRG00000017006) #23	CRHBP (ENSPTRG00000017007) #24	AGGF1 (ENSPTRG00000017008) #25	ZBED3 (ENSPTRG00000050050) #26	ENSPTRG00000046179	ENSPTRG00000042930	PDE8B (ENSPTRG00000017010) #27	WDR41 (ENSPTRG00000017011) #28	ENSPTRG00000023613	OTP (ENSPTRG00000017012) #29	TBCA (ENSPTRG00000017013) #30	AP3B1 (ENSPTRG00000017015) #31	SCAMP1 (ENSPTRG00000047664) #33	LHFPL2 (ENSPTRG00000045309) #34	ARSB (ENSPTRG00000017019) #36
Bonobo	MODERN SPECIES	18	FAM169A (ENSPPAG00000042903) #9	ENSPPAG00000041224	ENSPPAG00000035800	ANKRD31 (ENSPPAG00000033501) #11	HMGCR (ENSPPAG00000034707) #12	CERT1 (ENSPPAG00000042589) #13	POLK (ENSPPAG00000026238) #14	ANKDD1B (ENSPPAG00000039465) #15	POC5 (ENSPPAG00000037734) #16	ENSPPAG00000035826	ENSPPAG00000038410	SV2C (ENSPPAG00000042256) #18	F2RL2 (ENSPPAG00000036549) #19	IQGAP2 (ENSPPAG00000029477) #20	F2R (ENSPPAG00000034950) #21	F2RL1 (ENSPPAG00000023823) #22	S100Z (ENSPPAG00000038063) #23	CRHBP (ENSPPAG00000041280) #24	AGGF1 (ENSPPAG00000035969) #25	ENSPPAG00000015926	ENSPPAG00000042326	PDE8B (ENSPPAG00000037153) #27	ENSPPAG00000035224	WDR41 (ENSPPAG00000036126) #28	OTP (ENSPPAG00000042915) #29	TBCA (ENSPPAG00000037014) #30	ENSPPAG00000044127	AP3B1 (ENSPPAG00000038854) #31	SCAMP1 (ENSPPAG00000037862) #33	LHFPL2 (ENSPPAG00000036923) #34	ARSB (ENSPPAG00000040516) #36
Human	MODERN SPECIES	17	HEXB (ENSG00000049860)	GFM2 (ENSG00000164347)	NSA2 (ENSG00000164346) ##7	FAM169A (ENSG00000198780) #9	GCNT4 (ENSG00000176928) #10	ANKRD31 (ENSG00000145700) #11	HMGCR (ENSG00000113161) #12	CERT1 (ENSG00000113163) #13	POLK (ENSG00000122008) #14	ANKDD1B (ENSG00000189045) #15	POC5 (ENSG00000152359) #16	SV2C (ENSG00000122012) #18	IQGAP2 (ENSG00000145703) #20	F2RL2 (ENSG00000164220) #19	F2R (ENSG00000181104) #21	F2RL1 (ENSG00000164251) #22	S100Z (ENSG00000171643) #23	CRHBP (ENSG00000145708) #24	AGGF1 (ENSG00000164252) #25	ZBED3 (ENSG00000132846) #26	ENSG00000284762	PDE8B (ENSG00000113231) #27	WDR41 (ENSG00000164253) #28	OTP (ENSG00000171540) #29	TBCA (ENSG00000171530) #30	AP3B1 (ENSG00000132842) #31	SCAMP1 (ENSG00000085365) #33	LHFPL2 (ENSG00000145685) #34	ARSB (ENSG00000113273) #36	DMGDH (ENSG00000132837) #37	BHMT2 (ENSG00000132840)
Gorilla	MODERN SPECIES	8	ENSGGOG00000023345	GCNT4 (ENSGGOG00000027775) #10	ANKRD31 (ENSGGOG00000017052) #11	HMGCR (ENSGGOG00000010919) #12	CERT1 (ENSGGOG00000005049) #13	POLK (ENSGGOG00000015644) #14	ENSGGOG00000015099 #15	POC5 (ENSGGOG00000015106) #16	ENSGGOG00000039885	ENSGGOG00000042268	ENSGGOG00000039209	SV2C (ENSGGOG00000007723) #18	F2RL2 (ENSGGOG00000011789) #19	IQGAP2 (ENSGGOG00000014696) #20	F2R (ENSGGOG00000010442) #21	F2RL1 (ENSGGOG00000007078) #22	S100Z (ENSGGOG00000025895) #23	CRHBP (ENSGGOG00000011139) #24	AGGF1 (ENSGGOG00000010269) #25	ZBED3 (ENSGGOG00000002896) #26	ENSGGOG00000037102	ENSGGOG00000039702	PDE8B (ENSGGOG00000005317) #27	WDR41 (ENSGGOG00000026798) #28	ENSGGOG00000027406	OTP (ENSGGOG00000015687) #29	ENSGGOG00000023547 #30	ENSGGOG00000027597	AP3B1 (ENSGGOG00000001771) #31	SCAMP1 (ENSGGOG00000015191) #33	LHFPL2 (ENSGGOG00000003771) #34
Orangutan	MODERN SPECIES	18	NSA2 (ENSPPYG00000025926) ##7	FAM169A (ENSPPYG00000015557) #9	ENSPPYG00000029971	GCNT4 (ENSPPYG00000015558) #10	ANKRD31 (ENSPPYG00000015559) #11	HMGCR (ENSPPYG00000015560) #12	CERT1 (ENSPPYG00000015561) #13	POLK (ENSPPYG00000015562) #14	ANKDD1B (ENSPPYG00000015563) #15	POC5 (ENSPPYG00000015564) #16	ENSPPYG00000015565	SV2C (ENSPPYG00000015566) #18	IQGAP2 (ENSPPYG00000015568) #20	F2RL2 (ENSPPYG00000015569) #19	F2R (ENSPPYG00000015570) #21	F2RL1 (ENSPPYG00000041489) #22	S100Z (ENSPPYG00000015572) #23	CRHBP (ENSPPYG00000015573) #24	AGGF1 (ENSPPYG00000015574) #25	ZBED3 (ENSPPYG00000015575) #26	PDE8B (ENSPPYG00000015576) #27	ENSPPYG00000030861	WDR41 (ENSPPYG00000015577) #28	OTP (ENSPPYG00000015578) #29	TBCA (ENSPPYG00000015579) #30	ENSPPYG00000040806	AP3B1 (ENSPPYG00000015580) #31	SCAMP1 (ENSPPYG00000015581) #33	LHFPL2 (ENSPPYG00000015582) #34	ARSB (ENSPPYG00000015583) #36	DMGDH (ENSPPYG00000015584) #37
Gibbon	MODERN SPECIES	11	ENSNLEG00000012375	ACSM5 (ENSNLEG00000012394)	PDILT (ENSNLEG00000012398)	UMOD (ENSNLEG00000012413)	GP2 (ENSNLEG00000012434)	GPR139 (ENSNLEG00000012460)	GPRC5B (ENSNLEG00000012461)	IQCK (ENSNLEG00000034248)	KNOP1 (ENSNLEG00000012496)	VPS35L (ENSNLEG00000012499)	CCP110 (ENSNLEG00000012522)	GDE1 (ENSNLEG00000012560)	IQGAP2 (ENSNLEG00000012573) #20	F2RL2 (ENSNLEG00000012616) #19	F2R (ENSNLEG00000012619) #21	F2RL1 (ENSNLEG00000012622) #22	ENSNLEG00000031332	S100Z (ENSNLEG00000012623) #23	CRHBP (ENSNLEG00000012627) #24	AGGF1 (ENSNLEG00000026907) #25	PDE8B (ENSNLEG00000012655) #27	ENSNLEG00000028936	WDR41 (ENSNLEG00000012712) #28	OTP (ENSNLEG00000012728) #29	TBCA (ENSNLEG00000012734) #30	ENSNLEG00000012739	AP3B1 (ENSNLEG00000012740) #31	SCAMP1 (ENSNLEG00000029924) #33	LHFPL2 (ENSNLEG00000035509) #34	ENSNLEG00000018637	ARSB (ENSNLEG00000012786) #36
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Vervet Monkey	MODERN SPECIES	23	ENC1 (ENSCSAG00000019415)	HEXB (ENSCSAG00000015476)	GFM2 (ENSCSAG00000015464)	ENSCSAG00000015450 ##7	FAM169A (ENSCSAG00000015436) #9	GCNT4 (ENSCSAG00000019416) #10	ENSCSAG00000015425 #11	HMGCR (ENSCSAG00000015420) #12	CERT1 (ENSCSAG00000015407) #13	POLK (ENSCSAG00000015397) #14	POC5 (ENSCSAG00000015388) #16	SV2C (ENSCSAG00000015376) #18	IQGAP2 (ENSCSAG00000015367) #20	F2RL2 (ENSCSAG00000015353) #19	F2R (ENSCSAG00000015345) #21	F2RL1 (ENSCSAG00000015342) #22	CRHBP (ENSCSAG00000015337) #24	ENSCSAG00000015331	AGGF1 (ENSCSAG00000015324) #25	ZBED3 (ENSCSAG00000019417) #26	PDE8B (ENSCSAG00000015317) #27	WDR41 (ENSCSAG00000015310) #28	OTP (ENSCSAG00000015302) #29	ENSCSAG00000015299	AP3B1 (ENSCSAG00000015290) #31	SCAMP1 (ENSCSAG00000015275) #33	ENSCSAG00000019418	LHFPL2 (ENSCSAG00000015267) #34	ARSB (ENSCSAG00000015262) #36	DMGDH (ENSCSAG00000015255) #37	BHMT2 (ENSCSAG00000015246)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Macaca	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00730000110997.k.b.a	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Pig-tailed macaque	MODERN SPECIES	533	HMGCR (ENSMNEG00000036782) #12	CERT1 (ENSMNEG00000034301) #13	ENSMNEG00000012143	POLK (ENSMNEG00000016543) #14	ANKDD1B (ENSMNEG00000040050) #15	ENSMNEG00000041053 ##32	POC5 (ENSMNEG00000028970) #16	ENSMNEG00000029783	ENSMNEG00000039274	ENSMNEG00000035234	SV2C (ENSMNEG00000043938) #18	F2RL2 (ENSMNEG00000028529) #19	IQGAP2 (ENSMNEG00000039584) #20	ENSMNEG00000036523	F2R (ENSMNEG00000039945) #21	F2RL1 (ENSMNEG00000038661) #22	CRHBP (ENSMNEG00000039318) #24	AGGF1 (ENSMNEG00000044235) #25	ENSMNEG00000036640	ENSMNEG00000042545	PDE8B (ENSMNEG00000045435) #27	WDR41 (ENSMNEG00000020110) #28	OTP (ENSMNEG00000033198) #29	ENSMNEG00000044207 #30	ENSMNEG00000004983	ENSMNEG00000041744	AP3B1 (ENSMNEG00000043246) #31	SCAMP1 (ENSMNEG00000028211) #33	LHFPL2 (ENSMNEG00000031372) #34	ARSB (ENSMNEG00000045377) #36	DMGDH (ENSMNEG00000026178) #37
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00730000110997.k.b.a	ENSGT01050000245467.b.a.b	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000161627.a.a.a.a.a.a.a.b	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Rhesus	MODERN SPECIES	16	NSA2 (ENSMMUG00000011196) ##7	FAM169A (ENSMMUG00000011198) #9	ANKRD31 (ENSMMUG00000011061) #11	GCNT4 (ENSMMUG00000043533) #10	ENSMMUG00000054777	HMGCR (ENSMMUG00000006139) #12	CERT1 (ENSMMUG00000006141) #13	POLK (ENSMMUG00000006144) #14	ANKDD1B (ENSMMUG00000061069) #15	POC5 (ENSMMUG00000006146) #16	SV2C (ENSMMUG00000019887) #18	ENSMMUG00000049361	IQGAP2 (ENSMMUG00000022982) #20	F2RL2 (ENSMMUG00000022988) #19	F2R (ENSMMUG00000039522) #21	F2RL1 (ENSMMUG00000060389) #22	ENSMMUG00000050110	CRHBP (ENSMMUG00000021354) #24	AGGF1 (ENSMMUG00000021358) #27	ZBED3 (ENSMMUG00000021357) #26	WDR41 (ENSMMUG00000021361) #28	OTP (ENSMMUG00000039760) #29	ENSMMUG00000053817 #30	AP3B1 (ENSMMUG00000001360) #31	ENSMMUG00000057268	SCAMP1 (ENSMMUG00000039925) #33	LHFPL2 (ENSMMUG00000016402) #34	ARSB (ENSMMUG00000006792) #36	DMGDH (ENSMMUG00000006795) #37	BHMT2 (ENSMMUG00000006796)	JMY (ENSMMUG00000046325)
Crab-eating macaque	MODERN SPECIES	16	GFM2 (ENSMFAG00000039713)	NSA2 (ENSMFAG00000038283) ##7	FAM169A (ENSMFAG00000001548) #9	GCNT4 (ENSMFAG00000005546) #10	ANKRD31 (ENSMFAG00000044070) #11	HMGCR (ENSMFAG00000036118) #12	CERT1 (ENSMFAG00000030820) #13	POLK (ENSMFAG00000043179) #14	SV2C (ENSMFAG00000036123) #18	ENSMFAG00000000588	ENSMFAG00000048479	IQGAP2 (ENSMFAG00000032362) #20	ENSMFAG00000059937	F2RL2 (ENSMFAG00000045908) #19	F2R (ENSMFAG00000044734) #21	F2RL1 (ENSMFAG00000037697) #22	CRHBP (ENSMFAG00000041775) #24	AGGF1 (ENSMFAG00000038062) #25	ZBED3 (ENSMFAG00000065084) #26	ENSMFAG00000063877	PDE8B (ENSMFAG00000041903) #27	ENSMFAG00000040282	WDR41 (ENSMFAG00000002206) #28	OTP (ENSMFAG00000056050) #29	TBCA (ENSMFAG00000034059) #30	ENSMFAG00000057074	AP3B1 (ENSMFAG00000040032) #31	ENSMFAG00000056484	SCAMP1 (ENSMFAG00000037897) #33	LHFPL2 (ENSMFAG00000036894) #34	ARSB (ENSMFAG00000038907) #36
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Olive baboon	MODERN SPECIES	15	CERT1 (ENSPANG00000000059) #13	POLK (ENSPANG00000000060) #14	ENSPANG00000038550	ANKDD1B (ENSPANG00000009551) #15	POC5 (ENSPANG00000013599) #16	ENSPANG00000046931	ENSPANG00000044389	SV2C (ENSPANG00000014041) #18	ENSPANG00000044335	ENSPANG00000018228	IQGAP2 (ENSPANG00000004269) #20	ENSPANG00000037698	F2RL2 (ENSPANG00000011810) #19	F2R (ENSPANG00000013598) #21	ENSPANG00000037268	F2RL1 (ENSPANG00000003861) #22	CRHBP (ENSPANG00000010788) #24	AGGF1 (ENSPANG00000026423) #25	ZBED3 (ENSPANG00000038596) #26	PDE8B (ENSPANG00000025090) #27	WDR41 (ENSPANG00000011629) #28	OTP (ENSPANG00000009550) #29	TBCA (ENSPANG00000021931) #30	AP3B1 (ENSPANG00000023495) #31	ENSPANG00000050549	SCAMP1 (ENSPANG00000004375) #33	LHFPL2 (ENSPANG00000006610) #34	ARSB (ENSPANG00000023320) #36	DMGDH (ENSPANG00000016060) #37	BHMT (ENSPANG00000010787)	JMY (ENSPANG00000008952)
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Drill	MODERN SPECIES	197	CERT1 (ENSMLEG00000042639) #13	ENSMLEG00000006839	POLK (ENSMLEG00000042768) #14	ANKDD1B (ENSMLEG00000029848) #15	ENSMLEG00000031391 ##32	POC5 (ENSMLEG00000039781) #16	ENSMLEG00000039763	ENSMLEG00000040235	SV2C (ENSMLEG00000000294) #18	ENSMLEG00000040224	F2RL2 (ENSMLEG00000021660) #19	IQGAP2 (ENSMLEG00000027862) #20	ENSMLEG00000019477	ENSMLEG00000032992	F2R (ENSMLEG00000034077) #21	F2RL1 (ENSMLEG00000032188) #22	CRHBP (ENSMLEG00000033854) #24	AGGF1 (ENSMLEG00000031926) #25	ENSMLEG00000040040	PDE8B (ENSMLEG00000040085) #27	WDR41 (ENSMLEG00000039709) #28	OTP (ENSMLEG00000035311) #29	TBCA (ENSMLEG00000021010) #30	ENSMLEG00000025761	AP3B1 (ENSMLEG00000031960) #31
Sooty mangabey	MODERN SPECIES	296	CERT1 (ENSCATG00000037646) #13	ENSCATG00000019819	POLK (ENSCATG00000014199) #14	ANKDD1B (ENSCATG00000040088) #15	ENSCATG00000039793 ##32	POC5 (ENSCATG00000044188) #16	ENSCATG00000033028	ENSCATG00000038048	ENSCATG00000004582	ENSCATG00000039111	SV2C (ENSCATG00000036443) #18	F2RL2 (ENSCATG00000035572) #19	IQGAP2 (ENSCATG00000029179) #20	ENSCATG00000044545	F2R (ENSCATG00000004708) #21	F2RL1 (ENSCATG00000032504) #22	CRHBP (ENSCATG00000033058) #24	AGGF1 (ENSCATG00000041518) #25	ENSCATG00000030461	PDE8B (ENSCATG00000037786) #27	WDR41 (ENSCATG00000041825) #28	OTP (ENSCATG00000032638) #29	ENSCATG00000034024 #30	ENSCATG00000017219	AP3B1 (ENSCATG00000038017) #31	SCAMP1 (ENSCATG00000044496) #33	LHFPL2 (ENSCATG00000035958) #34	ARSB (ENSCATG00000016836) #36	DMGDH (ENSCATG00000043134) #37	BHMT2 (ENSCATG00000041810)	BHMT (ENSCATG00000018459)
Rhinopithecus	ANCESTRAL SPECIES	435					ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154690.ub.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22
Golden snub-nosed monkey	MODERN SPECIES	2770				HMGCR (ENSRROG00000039933) #12	CERT1 (ENSRROG00000029719) #13	POLK (ENSRROG00000037966) #14	ANKDD1B (ENSRROG00000040202) #15	POC5 (ENSRROG00000042318) #16	ENSRROG00000030072	ENSRROG00000040882	SV2C (ENSRROG00000013475) #18	F2RL2 (ENSRROG00000038200) #19	IQGAP2 (ENSRROG00000034599) #20	F2R (ENSRROG00000036126) #21	ENSRROG00000037429	F2RL1 (ENSRROG00000032623) #22
Black snub-nosed monkey	MODERN SPECIES	1407				HMGCR (ENSRBIG00000037269) #12	CERT1 (ENSRBIG00000043633) #13	POLK (ENSRBIG00000037378) #14	ANKDD1B (ENSRBIG00000041604) #15	POC5 (ENSRBIG00000041501) #16	ENSRBIG00000028878	SV2C (ENSRBIG00000040092) #18	ENSRBIG00000036353	IQGAP2 (ENSRBIG00000034318) #20	F2RL2 (ENSRBIG00000019692) #19	F2R (ENSRBIG00000036891) #21	ENSRBIG00000042617	F2RL1 (ENSRBIG00000037566) #22	ENSRBIG00000029722	ENSRBIG00000017660
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Cebidae	ANCESTRAL SPECIES	6	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00510000047029.z.e	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Capuchin	MODERN SPECIES	50	ENSCCAG00000018354	ENSCCAG00000030843	GCNT4 (ENSCCAG00000012660) #10	ANKRD31 (ENSCCAG00000025762) #11	ENSCCAG00000024833	HMGCR (ENSCCAG00000023164) #12	CERT1 (ENSCCAG00000021594) #13	POLK (ENSCCAG00000029021) #14	ANKDD1B (ENSCCAG00000020279) #15	POC5 (ENSCCAG00000013495) #16	ENSCCAG00000030179	SV2C (ENSCCAG00000036246) #18	IQGAP2 (ENSCCAG00000032875) #20	F2RL2 (ENSCCAG00000023100) #19	F2R (ENSCCAG00000035401) #21	F2RL1 (ENSCCAG00000020451) #22	S100Z (ENSCCAG00000021575) #23	ENSCCAG00000027406	CRHBP (ENSCCAG00000017626) #24	AGGF1 (ENSCCAG00000023174) #25	PDE8B (ENSCCAG00000035315) #27	ENSCCAG00000024360 #28	ENSCCAG00000033428	OTP (ENSCCAG00000028580) #29	TBCA (ENSCCAG00000034960) #30	ENSCCAG00000036687	AP3B1 (ENSCCAG00000024221) #31	ENSCCAG00000001996	SCAMP1 (ENSCCAG00000020394) #33	LHFPL2 (ENSCCAG00000034151) #34	ARSB (ENSCCAG00000026253) #36
Bolivian squirrel monkey	MODERN SPECIES	43	GCNT4 (ENSSBOG00000018505) #10	ANKRD31 (ENSSBOG00000030519) #11	ENSSBOG00000030051	HMGCR (ENSSBOG00000028283) #12	CERT1 (ENSSBOG00000027229) #13	POLK (ENSSBOG00000034732) #14	ANKDD1B (ENSSBOG00000027462) #15	POC5 (ENSSBOG00000034084) #16	ENSSBOG00000028612	SV2C (ENSSBOG00000034394) #18	ENSSBOG00000032555	F2RL2 (ENSSBOG00000026294) #19	IQGAP2 (ENSSBOG00000020078) #20	F2R (ENSSBOG00000033584) #21	ENSSBOG00000027642	F2RL1 (ENSSBOG00000028683) #22	S100Z (ENSSBOG00000016013) #23	ENSSBOG00000013156	CRHBP (ENSSBOG00000024077) #24	AGGF1 (ENSSBOG00000019539) #25	ENSSBOG00000032840	PDE8B (ENSSBOG00000020456) #27	WDR41 (ENSSBOG00000019142) #28	ENSSBOG00000021924	OTP (ENSSBOG00000035833) #29	TBCA (ENSSBOG00000031001) #30	AP3B1 (ENSSBOG00000029511) #31	ENSSBOG00000034436	SCAMP1 (ENSSBOG00000029488) #33	LHFPL2 (ENSSBOG00000033083) #34	ARSB (ENSSBOG00000031483) #36
Marmoset	MODERN SPECIES	11	NSA2 (ENSCJAG00000016874) ##7	FAM169A (ENSCJAG00000016884) #9	GCNT4 (ENSCJAG00000016941) #10	ANKRD31 (ENSCJAG00000016943) #11	HMGCR (ENSCJAG00000016954) #12	CERT1 (ENSCJAG00000017020) #13	POLK (ENSCJAG00000017052) #14	ANKDD1B (ENSCJAG00000017129) #15	ENSCJAG00000071025	POC5 (ENSCJAG00000017148) #16	SV2C (ENSCJAG00000020031) #18	F2RL2 (ENSCJAG00000020029) #19	IQGAP2 (ENSCJAG00000019985) #20	F2R (ENSCJAG00000086495) #21	ENSCJAG00000084566	F2RL1 (ENSCJAG00000062182) #22	S100Z (ENSCJAG00000081437) #23	CRHBP (ENSCJAG00000019970) #24	ENSCJAG00000070903	AGGF1 (ENSCJAG00000019955) #25	ZBED3 (ENSCJAG00000019950) #26	PDE8B (ENSCJAG00000019876) #27	WDR41 (ENSCJAG00000019853) #28	OTP (ENSCJAG00000071567) #29	ENSCJAG00000085518	ENSCJAG00000072122	ENSCJAG00000019848 #30	ENSCJAG00000071117	ENSCJAG00000085539	AP3B1 (ENSCJAG00000019804) #31	SCAMP1 (ENSCJAG00000019794) #33
Mas night monkey	MODERN SPECIES	670	GFM2 (ENSANAG00000027737)	ENSANAG00000022225 ##7	FAM169A (ENSANAG00000030731) #9	GCNT4 (ENSANAG00000019837) #10	ANKRD31 (ENSANAG00000022634) #11	ENSANAG00000019757	HMGCR (ENSANAG00000030341) #12	CERT1 (ENSANAG00000035049) #13	POLK (ENSANAG00000033747) #14	POC5 (ENSANAG00000033971) #16	SV2C (ENSANAG00000020779) #18	ENSANAG00000023009	IQGAP2 (ENSANAG00000027336) #20	F2RL2 (ENSANAG00000019493) #19	F2R (ENSANAG00000020328) #21	F2RL1 (ENSANAG00000021399) #22	S100Z (ENSANAG00000027821) #23	ENSANAG00000028007	CRHBP (ENSANAG00000022343) #24	AGGF1 (ENSANAG00000023021) #25	PDE8B (ENSANAG00000031594) #27	WDR41 (ENSANAG00000004152) #28	OTP (ENSANAG00000029433) #29	ENSANAG00000035527 #30	AP3B1 (ENSANAG00000035703) #31	ENSANAG00000036326	SCAMP1 (ENSANAG00000023081) #33	LHFPL2 (ENSANAG00000021404) #34	ARSB (ENSANAG00000028965) #36	ENSANAG00000019436	DMGDH (ENSANAG00000019881) #37
Tarsier	MODERN SPECIES	6251															ENSTSYG00000030382	F2RL1 (ENSTSYG00000004594) #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.f #30	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Mouse lemur	MODERN SPECIES	3	GFM2 (ENSMICG00000000749)	ENSMICG00000027319 ##7	FAM169A (ENSMICG00000000753) #9	GCNT4 (ENSMICG00000014409) #10	ANKRD31 (ENSMICG00000014418) #11	HMGCR (ENSMICG00000014536) #12	CERT1 (ENSMICG00000028951) #13	POLK (ENSMICG00000000006) #14	ANKDD1B (ENSMICG00000031448) #15	ENSMICG00000006494 #16	ENSMICG00000044813	SV2C (ENSMICG00000007347) #18	F2RL2 (ENSMICG00000036441) #19	IQGAP2 (ENSMICG00000007353) #20	F2R (ENSMICG00000029417) #21	F2RL1 (ENSMICG00000032411) #22	S100Z (ENSMICG00000026826) #23	CRHBP (ENSMICG00000034984) #24	AGGF1 (ENSMICG00000028679) #25	PDE8B (ENSMICG00000016635) #27	WDR41 (ENSMICG00000016642) #28	OTP (ENSMICG00000030234) #29	ENSMICG00000016668 #30	ENSMICG00000044997	ERCC8 (ENSMICG00000008906)	ELOVL7 (ENSMICG00000042937)	DEPDC1B (ENSMICG00000013552)	ENSMICG00000045425	ENSMICG00000031463	ENSMICG00000029043	PDE4D (ENSMICG00000014743)
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Coquerels sifaka	MODERN SPECIES	999	ARHGEF28 (ENSPCOG00000016965)	ENC1 (ENSPCOG00000026678)	HEXB (ENSPCOG00000017903)	GFM2 (ENSPCOG00000022606)	NSA2 (ENSPCOG00000016622) ##7	FAM169A (ENSPCOG00000020536) #9	ANKRD31 (ENSPCOG00000017441) #11	HMGCR (ENSPCOG00000016696) #12	CERT1 (ENSPCOG00000016749) #13	POLK (ENSPCOG00000027526) #14	ANKDD1B (ENSPCOG00000020302) #15	POC5 (ENSPCOG00000025218) #16	SV2C (ENSPCOG00000018991) #18	F2RL2 (ENSPCOG00000018657) #19	IQGAP2 (ENSPCOG00000026521) #20	F2RL1 (ENSPCOG00000015685) #22	S100Z (ENSPCOG00000005734) #23	CRHBP (ENSPCOG00000026267) #24	AGGF1 (ENSPCOG00000026723) #25	PDE8B (ENSPCOG00000017117) #27	WDR41 (ENSPCOG00000019741) #28	OTP (ENSPCOG00000028773) #29	TBCA (ENSPCOG00000005770) #30	ENSPCOG00000012906	ENSPCOG00000004066 #31	SCAMP1 (ENSPCOG00000022266) #33	LHFPL2 (ENSPCOG00000006098) #34	ARSB (ENSPCOG00000024261) #36	DMGDH (ENSPCOG00000014759) #37	BHMT2 (ENSPCOG00000027821)	BHMT (ENSPCOG00000000488)
Greater bamboo lemur	MODERN SPECIES	488																F2RL1 (ENSPSMG00000021725) #22	S100Z (ENSPSMG00000021731) #23	CRHBP (ENSPSMG00000021746) #24	AGGF1 (ENSPSMG00000021774) #25	PDE8B (ENSPSMG00000022043) #27	WDR41 (ENSPSMG00000022198) #28	OTP (ENSPSMG00000022216) #29	TBCA (ENSPSMG00000022229) #30	AP3B1 (ENSPSMG00000022301) #31	SCAMP1 (ENSPSMG00000022346) #33	LHFPL2 (ENSPSMG00000022352) #34	ARSB (ENSPSMG00000022382) #36	DMGDH (ENSPSMG00000022423) #37	BHMT2 (ENSPSMG00000022458)	BHMT (ENSPSMG00000022496)	ENSPSMG00000022516
Bushbaby	MODERN SPECIES	132	HEXB (ENSOGAG00000008957)	GFM2 (ENSOGAG00000008961)	FAM169A (ENSOGAG00000006270) #9	GCNT4 (ENSOGAG00000011857) #10	ENSOGAG00000028567 #11	HMGCR (ENSOGAG00000003776) #12	CERT1 (ENSOGAG00000003782) #13	POLK (ENSOGAG00000007007) #14	ANKDD1B (ENSOGAG00000007012) #15	POC5 (ENSOGAG00000016674) #16	SV2C (ENSOGAG00000013571) #18	ENSOGAG00000012074	IQGAP2 (ENSOGAG00000013579) #20	F2RL2 (ENSOGAG00000030469) #19	F2R (ENSOGAG00000013594) #21	F2RL1 (ENSOGAG00000001151) #22	S100Z (ENSOGAG00000027239) #23	CRHBP (ENSOGAG00000003437) #24	AGGF1 (ENSOGAG00000003439) #25	ZBED3 (ENSOGAG00000033172) #26	PDE8B (ENSOGAG00000006930) #27	WDR41 (ENSOGAG00000006937) #28	OTP (ENSOGAG00000010197) #29	TBCA (ENSOGAG00000010198) #30	ENSOGAG00000026363	AP3B1 (ENSOGAG00000002145) #31	SCAMP1 (ENSOGAG00000014059) #33	LHFPL2 (ENSOGAG00000024907) #34	ARSB (ENSOGAG00000008620) #36	DMGDH (ENSOGAG00000008622) #37	BHMT2 (ENSOGAG00000008629)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Tree shrew	MODERN SPECIES	947												SV2C (ENSTBEG00000010889) #18	IQGAP2 (ENSTBEG00000010997) #20	F2RL2 (ENSTBEG00000011506) #19	F2R (ENSTBEG00000011565) #21	F2RL1 (ENSTBEG00000011751) #22
Glires	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Lagomorpha	ANCESTRAL SPECIES	211					ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Rabbit	MODERN SPECIES	588										ENSOCUG00000002900 #14	ANKDD1B (ENSOCUG00000002937) #15	POC5 (ENSOCUG00000002940) #16	SV2C (ENSOCUG00000024422) #18	IQGAP2 (ENSOCUG00000003397) #20	F2R (ENSOCUG00000022794) #21	F2RL1 (ENSOCUG00000002582) #22	ENSOCUG00000023729 #23	CRHBP (ENSOCUG00000010027) #24
Pika	MODERN SPECIES	10074															F2R (ENSOPRG00000009364) #21	F2RL1 (ENSOPRG00000009367) #22	S100Z (ENSOPRG00000009376) #23
Rodentia	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Muroidea	ANCESTRAL SPECIES	4	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Golden Hamster	MODERN SPECIES	620	Hexb (ENSMAUG00000014888)	Gfm2 (ENSMAUG00000022103)	Nsa2 (ENSMAUG00000002302) ##7	Fam169a (ENSMAUG00000009954) #9	Gcnt4 (ENSMAUG00000017229) #10	Ankrd31 (ENSMAUG00000020142) #11	Hmgcr (ENSMAUG00000012278) #12	Cert1 (ENSMAUG00000019472) #13	Polk (ENSMAUG00000016560) #14	Ankdd1b (ENSMAUG00000018964) #15	Poc5 (ENSMAUG00000003174) #16	Sv2c (ENSMAUG00000005414) #18	Iqgap2 (ENSMAUG00000022130) #20	F2rl2 (ENSMAUG00000015710) #19	F2r (ENSMAUG00000010556) #21	F2rl1 (ENSMAUG00000012126) #22	S100z (ENSMAUG00000001531) #23	Crhbp (ENSMAUG00000010702) #24	Aggf1 (ENSMAUG00000012678) #25	Pde8b (ENSMAUG00000015472) #27	Wdr41 (ENSMAUG00000004461) #28	Otp (ENSMAUG00000007760) #29	Tbca (ENSMAUG00000018233) #30	Ap3b1 (ENSMAUG00000001490) #31	Scamp1 (ENSMAUG00000018961) #33	Lhfpl2 (ENSMAUG00000020241) #34	Arsb (ENSMAUG00000005115) #36	Dmgdh (ENSMAUG00000011337) #37	Bhmt2 (ENSMAUG00000008057)	ENSMAUG00000004226	Jmy (ENSMAUG00000015175)
Chinese hamster chok1gshd	MODERN SPECIES	1	Fam169a (ENSCGRG00001021297) #9	Gcnt4 (ENSCGRG00001008293) #10	ENSCGRG00001008489	ENSCGRG00001014554	Ankrd31 (ENSCGRG00001018162) #11	HMGCR (ENSCGRG00001016870) #12	Cert1 (ENSCGRG00001020451) #13	Polk (ENSCGRG00001013007) #14	ENSCGRG00001012277	Ankdd1b (ENSCGRG00001016471) #15	Poc5 (ENSCGRG00001015817) #16	Sv2c (ENSCGRG00001015770) #18	F2rl2 (ENSCGRG00001014616) #19	Iqgap2 (ENSCGRG00001019858) #20	F2r (ENSCGRG00001016531) #21	F2rl1 (ENSCGRG00001012796) #22	S100z (ENSCGRG00001009971) #23	Crhbp (ENSCGRG00001008314) #24	Aggf1 (ENSCGRG00001017039) #25	Zbed3 (ENSCGRG00001010271) #26	Pde8b (ENSCGRG00001015606) #27	Wdr41 (ENSCGRG00001008129) #28	ENSCGRG00001008932	Otp (ENSCGRG00001022392) #29	Tbca (ENSCGRG00001021971) #30	Ap3b1 (ENSCGRG00001009397) #31	Scamp1 (ENSCGRG00001004428) #33	Lhfpl2 (ENSCGRG00001003627) #34	Arsb (ENSCGRG00001015736) #36	Dmgdh (ENSCGRG00001014647) #37	Bhmt2 (ENSCGRG00001007704)
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Northern American deer mouse	MODERN SPECIES	6	Gfm2 (ENSPEMG00000000622)	Nsa2 (ENSPEMG00000015289) ##7	Fam169a (ENSPEMG00000010978) #9	Gcnt4 (ENSPEMG00000018132) #10	Ankrd31 (ENSPEMG00000018561) #11	Hmgcr (ENSPEMG00000016961) #12	Cert1 (ENSPEMG00000010777) #13	ENSPEMG00000017070	Polk (ENSPEMG00000019237) #14	Ankdd1b (ENSPEMG00000005192) #15	Poc5 (ENSPEMG00000008614) #16	Sv2c (ENSPEMG00000013942) #18	F2rl2 (ENSPEMG00000019142) #19	Iqgap2 (ENSPEMG00000013395) #20	F2r (ENSPEMG00000025363) #21	F2rl1 (ENSPEMG00000029040) #22	S100z (ENSPEMG00000013966) #23	Crhbp (ENSPEMG00000009836) #24	Aggf1 (ENSPEMG00000015659) #25	Pde8b (ENSPEMG00000020359) #27	ENSPEMG00000023412 #28	Tbca (ENSPEMG00000015419) #30	Ap3b1 (ENSPEMG00000021014) #31	Scamp1 (ENSPEMG00000029280) #33	Lhfpl2 (ENSPEMG00000029932) #34	Arsb (ENSPEMG00000020554) #36	Dmgdh (ENSPEMG00000021307) #37	Bhmt2 (ENSPEMG00000021198)	ENSPEMG00000020841	ENSPEMG00000030474	ENSPEMG00000026488
Prairie vole	MODERN SPECIES	6	ENSMOCG00000012395 ##7	Fam169a (ENSMOCG00000014172) #9	Gcnt4 (ENSMOCG00000017465) #10	Ankrd31 (ENSMOCG00000009502) #11	ENSMOCG00000019171	Hmgcr (ENSMOCG00000008012) #12	ENSMOCG00000019480 #13	Polk (ENSMOCG00000016143) #14	ENSMOCG00000014817	Ankdd1b (ENSMOCG00000003243) #15	Poc5 (ENSMOCG00000009038) #16	Sv2c (ENSMOCG00000021524) #18	Iqgap2 (ENSMOCG00000002734) #20	F2rl2 (ENSMOCG00000008663) #19	F2r (ENSMOCG00000012362) #21	F2rl1 (ENSMOCG00000013582) #22	S100z (ENSMOCG00000020194) #23	Crhbp (ENSMOCG00000021245) #24	ENSMOCG00000001987	Aggf1 (ENSMOCG00000003377) #25	Zbed3 (ENSMOCG00000011692) #26	Pde8b (ENSMOCG00000012277) #27	Wdr41 (ENSMOCG00000006320) #28	ENSMOCG00000006214	Otp (ENSMOCG00000019228) #29	Tbca (ENSMOCG00000005814) #30	ENSMOCG00000006493	ENSMOCG00000005321	Ap3b1 (ENSMOCG00000017264) #31	Scamp1 (ENSMOCG00000001373) #33	Lhfpl2 (ENSMOCG00000001998) #34
Murinae	ANCESTRAL SPECIES	24	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Mus	ANCESTRAL SPECIES	22	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Ryukyu mouse	MODERN SPECIES	4	Nsa2 (MGP_CAROLIEiJ_G0018813) ##7	Fam169a (MGP_CAROLIEiJ_G0018812) #9	1700029F12Rik (MGP_CAROLIEiJ_G0018811)	Gcnt4 (MGP_CAROLIEiJ_G0018810) #10	MGP_CAROLIEiJ_G0018809 #11	Hmgcr (MGP_CAROLIEiJ_G0018808) #12	Cert1 (MGP_CAROLIEiJ_G0018807) #13	MGP_CAROLIEiJ_G0018806	Polk (MGP_CAROLIEiJ_G0018805) #14	Ankdd1b (MGP_CAROLIEiJ_G0018804) #15	Poc5 (MGP_CAROLIEiJ_G0018803) #16	Sv2c (MGP_CAROLIEiJ_G0018802) #18	F2rl2 (MGP_CAROLIEiJ_G0018801) #19	Iqgap2 (MGP_CAROLIEiJ_G0018800) #20	F2r (MGP_CAROLIEiJ_G0018799) #21	F2rl1 (MGP_CAROLIEiJ_G0018798) #22	S100z (MGP_CAROLIEiJ_G0018797) #23	Crhbp (MGP_CAROLIEiJ_G0018796) #24	Aggf1 (MGP_CAROLIEiJ_G0018795) #25	Zbed3 (MGP_CAROLIEiJ_G0018794) #26	Pde8b (MGP_CAROLIEiJ_G0018793) #27	MGP_CAROLIEiJ_G0018792 #28	Otp (MGP_CAROLIEiJ_G0018791) #29	Tbca (MGP_CAROLIEiJ_G0018790) #30	Ap3b1 (MGP_CAROLIEiJ_G0018789) #31	MGP_CAROLIEiJ_G0018788	Scamp1 (MGP_CAROLIEiJ_G0018787) #33	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #34	MGP_CAROLIEiJ_G0018785	Arsb (MGP_CAROLIEiJ_G0018784) #36	MGP_CAROLIEiJ_G0018783
Mus_B	ANCESTRAL SPECIES	13	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Mouse	MODERN SPECIES	4	Gm6169 (ENSMUSG00000057762)	Fam169a (ENSMUSG00000041817) #9	1700029F12Rik (ENSMUSG00000052075)	Gcnt4 (ENSMUSG00000091387) #10	Ankrd31 (ENSMUSG00000109561) #11	Hmgcr (ENSMUSG00000021670) #12	Cert1 (ENSMUSG00000021669) #13	Polk (ENSMUSG00000021668) #14	Ankdd1b (ENSMUSG00000047117) #15	Poc5 (ENSMUSG00000021671) #16	Btf3l4b (ENSMUSG00000114133)	Sv2c (ENSMUSG00000051111) #18	F2rl2 (ENSMUSG00000021675) #19	Iqgap2 (ENSMUSG00000021676) #20	F2r (ENSMUSG00000048376) #21	F2rl1 (ENSMUSG00000021678) #22	S100z (ENSMUSG00000021679) #23	Crhbp (ENSMUSG00000021680) #24	Aggf1 (ENSMUSG00000021681) #25	Zbed3 (ENSMUSG00000041995) #26	Pde8b (ENSMUSG00000021684) #27	Wdr41 (ENSMUSG00000042015) #28	Otp (ENSMUSG00000021685) #29	Tbca (ENSMUSG00000042043) #30	Ap3b1 (ENSMUSG00000021686) #31	Scamp1 (ENSMUSG00000021687) #33	Lhfpl2 (ENSMUSG00000045312) #34	Arsb (ENSMUSG00000042082) #36	Dmgdh (ENSMUSG00000042102) #37	Bhmt2 (ENSMUSG00000042118)	Bhmt (ENSMUSG00000074768)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Steppe mouse	MODERN SPECIES	3412													Iqgap2 (ENSMSIG00000011044) #20	F2rl2 (ENSMSIG00000011060) #19	F2r (ENSMSIG00000011072) #21	F2rl1 (ENSMSIG00000011086) #22	S100z (ENSMSIG00000011096) #23	Crhbp (ENSMSIG00000011120) #24	Aggf1 (ENSMSIG00000011146) #25	ENSMSIG00000011178 #26	Pde8b (ENSMSIG00000011209) #27	ENSMSIG00000011421 #28	Otp (ENSMSIG00000011481) #29	ENSMSIG00000011491 #30	Ap3b1 (ENSMSIG00000011521) #31	Scamp1 (ENSMSIG00000011596) #33	Lhfpl2 (ENSMSIG00000011618) #34	Arsb (ENSMSIG00000011652) #36	Dmgdh (ENSMSIG00000011670) #37	Bhmt2 (ENSMSIG00000011736)	ENSMSIG00000011793
spretus	MODERN SPECIES	4	Gfm2 (MGP_SPRETEiJ_G0019696)	MGP_SPRETEiJ_G0019695 #7	Fam169a (MGP_SPRETEiJ_G0019694) #9	1700029F12Rik (MGP_SPRETEiJ_G0019693)	Gcnt4 (MGP_SPRETEiJ_G0019692) #10	Hmgcr (MGP_SPRETEiJ_G0019691) #12	Cert1 (MGP_SPRETEiJ_G0019690) #13	MGP_SPRETEiJ_G0019689	Polk (MGP_SPRETEiJ_G0019688) #14	Ankdd1b (MGP_SPRETEiJ_G0019687) #15	Poc5 (MGP_SPRETEiJ_G0019686) #16	Sv2c (MGP_SPRETEiJ_G0019685) #18	F2rl2 (MGP_SPRETEiJ_G0019684) #19	Iqgap2 (MGP_SPRETEiJ_G0019683) #20	F2r (MGP_SPRETEiJ_G0019682) #21	F2rl1 (MGP_SPRETEiJ_G0019681) #22	S100z (MGP_SPRETEiJ_G0019680) #23	Crhbp (MGP_SPRETEiJ_G0019679) #24	Aggf1 (MGP_SPRETEiJ_G0019678) #25	Zbed3 (MGP_SPRETEiJ_G0019677) #26	Pde8b (MGP_SPRETEiJ_G0019676) #27	MGP_SPRETEiJ_G0019675 #28	Otp (MGP_SPRETEiJ_G0019674) #29	Tbca (MGP_SPRETEiJ_G0019673) #30	Ap3b1 (MGP_SPRETEiJ_G0019672) #31	MGP_SPRETEiJ_G0019671	Scamp1 (MGP_SPRETEiJ_G0019670) #33	Lhfpl2 (MGP_SPRETEiJ_G0019669) #34	Arsb (MGP_SPRETEiJ_G0019668) #36	Dmgdh (MGP_SPRETEiJ_G0019667) #37	Bhmt2 (MGP_SPRETEiJ_G0019666)
Shrew mouse	MODERN SPECIES	2	Hexb (MGP_PahariEiJ_G0015890)	Gfm2 (MGP_PahariEiJ_G0015889)	Nsa2 (MGP_PahariEiJ_G0015888) ##7	Fam169a (MGP_PahariEiJ_G0015887) #9	Gcnt4 (MGP_PahariEiJ_G0015886) #10	Hmgcr (MGP_PahariEiJ_G0015885) #12	Cert1 (MGP_PahariEiJ_G0015884) #13	MGP_PahariEiJ_G0015883	Polk (MGP_PahariEiJ_G0015882) #14	Ankdd1b (MGP_PahariEiJ_G0015881) #15	Poc5 (MGP_PahariEiJ_G0015880) #16	Sv2c (MGP_PahariEiJ_G0015879) #18	F2rl2 (MGP_PahariEiJ_G0015878) #19	Iqgap2 (MGP_PahariEiJ_G0015877) #20	F2r (MGP_PahariEiJ_G0015876) #21	F2rl1 (MGP_PahariEiJ_G0015875) #22	S100z (MGP_PahariEiJ_G0015874) #23	Crhbp (MGP_PahariEiJ_G0015873) #24	Aggf1 (MGP_PahariEiJ_G0015872) #25	Zbed3 (MGP_PahariEiJ_G0015871) #26	Pde8b (MGP_PahariEiJ_G0015870) #27	MGP_PahariEiJ_G0015869 #28	Otp (MGP_PahariEiJ_G0015868) #29	Tbca (MGP_PahariEiJ_G0015867) #30	Ap3b1 (MGP_PahariEiJ_G0015866) #31	MGP_PahariEiJ_G0015865	Scamp1 (MGP_PahariEiJ_G0015864) #33	Lhfpl2 (MGP_PahariEiJ_G0015863) #34	Arsb (MGP_PahariEiJ_G0015862) #36	Dmgdh (MGP_PahariEiJ_G0015861) #37	MGP_PahariEiJ_G0015860
Rat	MODERN SPECIES	11	Fam169a (ENSRNOG00000016505) #9	Gcnt4 (ENSRNOG00000064612) #10	Ankrd31 (ENSRNOG00000025321) #11	Hmgcr (ENSRNOG00000016122) #12	Cert1 (ENSRNOG00000015686) #13	ENSRNOG00000067644	Polk (ENSRNOG00000060626) #14	Ankdd1b (ENSRNOG00000025377) #15	Poc5 (ENSRNOG00000018193) #16	AABR07007744.2 (ENSRNOG00000060714)	Sv2c (ENSRNOG00000018094) #18	F2rl2 (ENSRNOG00000018054) #19	Iqgap2 (ENSRNOG00000025406) #20	F2r (ENSRNOG00000048043) #21	AABR07007730.1 (ENSRNOG00000018045)	F2rl1 (ENSRNOG00000018003) #22	S100z (ENSRNOG00000017998) #23	Crhbp (ENSRNOG00000017890) #24	Aggf1 (ENSRNOG00000029304) #25	ENSRNOG00000063007	Zbed3 (ENSRNOG00000028941) #26	LOC100912266 (ENSRNOG00000059441)	ENSRNOG00000067662	Pde8b (ENSRNOG00000010280) #27	Wdr41 (ENSRNOG00000025462) #28	Otp (ENSRNOG00000010560) #29	Tbca (ENSRNOG00000048342) #30	ENSRNOG00000068970	Ap3b1 (ENSRNOG00000010624) #31	Scamp1 (ENSRNOG00000061582) #33	Lhfpl2 (ENSRNOG00000011032) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1748												Sv2c (ENSNGAG00000014621) #18	F2rl2 (ENSNGAG00000013049) #19	Iqgap2 (ENSNGAG00000005917) #20	F2r (ENSNGAG00000001548) #21	F2rl1 (ENSNGAG00000019243) #22	S100z (ENSNGAG00000014093) #23	Crhbp (ENSNGAG00000013680) #24	Aggf1 (ENSNGAG00000008354) #25	Zbed3 (ENSNGAG00000000806) #26	Pde8b (ENSNGAG00000003750) #27	ENSNGAG00000018792 #28	Otp (ENSNGAG00000016224) #29	Tbca (ENSNGAG00000020367) #30	Ap3b1 (ENSNGAG00000015487) #31	ENSNGAG00000011149
Lesser Egyptian jerboa	MODERN SPECIES	45	Gfm2 (ENSJJAG00000024278)	Nsa2 (ENSJJAG00000017152) ##7	Fam169a (ENSJJAG00000011041) #9	ENSJJAG00000016281	Gcnt4 (ENSJJAG00000010750) #10	ENSJJAG00000010566 #11	Hmgcr (ENSJJAG00000010723) #12	Cert1 (ENSJJAG00000023198) #13	Polk (ENSJJAG00000004931) #14	Ankdd1b (ENSJJAG00000013237) #15	Poc5 (ENSJJAG00000019666) #16	Sv2c (ENSJJAG00000012121) #18	F2rl2 (ENSJJAG00000020545) #19	Iqgap2 (ENSJJAG00000023927) #20	F2r (ENSJJAG00000021467) #21	F2rl1 (ENSJJAG00000005361) #22	ENSJJAG00000018088	S100z (ENSJJAG00000013195) #23	Crhbp (ENSJJAG00000010630) #24	Prrc1 (ENSJJAG00000011454)	Ctxn3 (ENSJJAG00000011014)	ENSJJAG00000017426	Slc12a2 (ENSJJAG00000019580)	Fbn2 (ENSJJAG00000020592)	ENSJJAG00000017710	Slc27a6 (ENSJJAG00000020519)	Isoc1 (ENSJJAG00000019157)	Adamts19 (ENSJJAG00000021431)	Minar2 (ENSJJAG00000000279)	Frmd4b (ENSJJAG00000023390)	Mitf (ENSJJAG00000018472)
Kangaroo rat	MODERN SPECIES	402	ENSDORG00000030249	Nsa2 (ENSDORG00000012640) ##7	Fam169a (ENSDORG00000012641) #9	Gcnt4 (ENSDORG00000015957) #10	Ankrd31 (ENSDORG00000008528) #11	ENSDORG00000005455 #12	Cert1 (ENSDORG00000005457) #13	Polk (ENSDORG00000007761) #14	Ankdd1b (ENSDORG00000007845) #15	Poc5 (ENSDORG00000000829) #16	Sv2c (ENSDORG00000004739) #18	Iqgap2 (ENSDORG00000006829) #20	F2rl2 (ENSDORG00000006832) #19	F2r (ENSDORG00000023264) #21	ENSDORG00000024082	F2rl1 (ENSDORG00000004660) #22	S100z (ENSDORG00000026410) #23	Crhbp (ENSDORG00000002200) #24	Ppwd1 (ENSDORG00000007359)	ENSDORG00000028726	Adamts6 (ENSDORG00000004761)	Cwc27 (ENSDORG00000009898)	ENSDORG00000028891	Srek1ip1 (ENSDORG00000009897)	Shisal2b (ENSDORG00000009896)	Rgs7bp (ENSDORG00000024658)	Nt5el (ENSDORG00000025625)	ENSDORG00000004059	Htr1a (ENSDORG00000026772)	Ipo11 (ENSDORG00000002721)	Dimt1 (ENSDORG00000006336)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	15	NSA2 (ENSSVLG00005006610) ##7	FAM169A (ENSSVLG00005006669) #9	GCNT4 (ENSSVLG00005006815) #10	ANKRD31 (ENSSVLG00005006845) #11	HMGCR (ENSSVLG00005006942) #12	CERT1 (ENSSVLG00005007093) #13	ENSSVLG00005007250	POLK (ENSSVLG00005007352) #14	ANKDD1B (ENSSVLG00005007433) #15	POC5 (ENSSVLG00005007522) #16	ENSSVLG00005007604	SV2C (ENSSVLG00005007661) #18	IQGAP2 (ENSSVLG00005007881) #20	F2RL2 (ENSSVLG00005008481) #19	F2R (ENSSVLG00005008506) #21	ENSSVLG00005008525 #22	ENSSVLG00005008549	S100Z (ENSSVLG00005008555) #23	CRHBP (ENSSVLG00005008579) #24	ENSSVLG00005008651	ENSSVLG00005008740	OCLN (ENSSVLG00005008798)	MARVELD2 (ENSSVLG00005008937)	RAD17 (ENSSVLG00005009140)	ENSSVLG00005009362	CCDC125 (ENSSVLG00005009466)	CDK7 (ENSSVLG00005009632)	ENSSVLG00005009714	CENPH (ENSSVLG00005009762)	CCNB1 (ENSSVLG00005009823)	SLC30A5 (ENSSVLG00005009911)
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005013733	ENSSVLG00005013685	LHFPL1 (ENSSVLG00005013627) ##34	AMOT (ENSSVLG00005013525)	ENSSVLG00005019330	ENSSVLG00005019275	ENSSVLG00005019228	ENSSVLG00005019177	ENSSVLG00005019126	ENSSVLG00005019077	HTR2C (ENSSVLG00005018984)	ENSSVLG00005018928	IL13RA2 (ENSSVLG00005018862)	LRCH2 (ENSSVLG00005018464)	ENSSVLG00005018369	ENSSVLG00005018340 #22	PLS3 (ENSSVLG00005018046)	ENSSVLG00005017980	AGTR2 (ENSSVLG00005017968)	ENSSVLG00005017948	ENSSVLG00005017904	SLC6A14 (ENSSVLG00005017746)	CT83 (ENSSVLG00005017691)	ENSSVLG00005017648	KLHL13 (ENSSVLG00005017370)	WDR44 (ENSSVLG00005017220)	DOCK11 (ENSSVLG00005016279)	IL13RA1 (ENSSVLG00005016116)	ENSSVLG00005016098	ENSSVLG00005016082	LONRF3 (ENSSVLG00005015856)
Marmotini	ANCESTRAL SPECIES	23	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Alpin marmot	MODERN SPECIES	48	HEXB (ENSMMMG00000002087)	GFM2 (ENSMMMG00000001763)	NSA2 (ENSMMMG00000001722) ##7	FAM169A (ENSMMMG00000001677) #9	GCNT4 (ENSMMMG00000001657) #10	ENSMMMG00000001628 #11	HMGCR (ENSMMMG00000001547) #12	CERT1 (ENSMMMG00000001422) #13	POLK (ENSMMMG00000001203) #14	ANKDD1B (ENSMMMG00000001142) #15	POC5 (ENSMMMG00000000939) #16	SV2C (ENSMMMG00000000845) #18	F2RL2 (ENSMMMG00000000828) #19	IQGAP2 (ENSMMMG00000000750) #20	F2R (ENSMMMG00000000732) #21	F2RL1 (ENSMMMG00000000723) #22	S100Z (ENSMMMG00000000720) #23
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Arctic ground squirrel	MODERN SPECIES	299	HEXB (ENSUPAG00010004984)	GFM2 (ENSUPAG00010005333)	NSA2 (ENSUPAG00010005383) ##7	FAM169A (ENSUPAG00010005409) #9	GCNT4 (ENSUPAG00010005440) #10	ENSUPAG00010005442 #11	HMGCR (ENSUPAG00010005462) #12	ENSUPAG00010005498 #13	POLK (ENSUPAG00010005814) #14	ANKDD1B (ENSUPAG00010005945) #15	POC5 (ENSUPAG00010005963) #16	SV2C (ENSUPAG00010006006) #18	IQGAP2 (ENSUPAG00010006026) #20	F2RL2 (ENSUPAG00010006042) #19	F2R (ENSUPAG00010006053) #21	F2RL1 (ENSUPAG00010006060) #22	S100Z (ENSUPAG00010006063) #23	CRHBP (ENSUPAG00010006069) #24
Squirrel	MODERN SPECIES	149	ENSSTOG00000027827	HEXB (ENSSTOG00000007903)	GFM2 (ENSSTOG00000007931)	ENSSTOG00000007959 ##7	FAM169A (ENSSTOG00000007975) #9	ANKRD31 (ENSSTOG00000034383) #11	HMGCR (ENSSTOG00000009610) #12	CERT1 (ENSSTOG00000003170) #13	ENSSTOG00000003205 #14	ANKDD1B (ENSSTOG00000009832) #15	POC5 (ENSSTOG00000009839) #16	SV2C (ENSSTOG00000013490) #18	F2RL2 (ENSSTOG00000034743) #19	IQGAP2 (ENSSTOG00000013504) #20	F2R (ENSSTOG00000008252) #21	F2RL1 (ENSSTOG00000026512) #22	S100Z (ENSSTOG00000009498) #23	CRHBP (ENSSTOG00000009510) #24
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Hystricomorpha_a	ANCESTRAL SPECIES	72	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	95	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Degu	MODERN SPECIES	218	HEXB (ENSODEG00000002081)	GFM2 (ENSODEG00000002193)	ENSODEG00000002883 ##7	FAM169A (ENSODEG00000002906) #9	ENSODEG00000002941	GCNT4 (ENSODEG00000018869) #10	ANKRD31 (ENSODEG00000003017) #11	HMGCR (ENSODEG00000003319) #12	CERT1 (ENSODEG00000002483) #13	POLK (ENSODEG00000002687) #14	ANKDD1B (ENSODEG00000003019) #15	POC5 (ENSODEG00000003014) #16	SV2C (ENSODEG00000003155) #18	IQGAP2 (ENSODEG00000003459) #20	ENSODEG00000003730	F2RL1 (ENSODEG00000002463) #22	S100Z (ENSODEG00000002505) #23	CRHBP (ENSODEG00000002524) #24	ENSODEG00000002814
Long-tailed chinchilla	MODERN SPECIES	132	GFM2 (ENSCLAG00000013440)	NSA2 (ENSCLAG00000010179) ##7	FAM169A (ENSCLAG00000009619) #9	ENSCLAG00000011385	GCNT4 (ENSCLAG00000010436) #10	ENSCLAG00000009641	ANKRD31 (ENSCLAG00000011065) #11	HMGCR (ENSCLAG00000010132) #12	CERT1 (ENSCLAG00000011527) #13	POLK (ENSCLAG00000011236) #14	ANKDD1B (ENSCLAG00000010494) #15	POC5 (ENSCLAG00000009830) #16	SV2C (ENSCLAG00000013949) #18	F2RL2 (ENSCLAG00000012739) #19	IQGAP2 (ENSCLAG00000011435) #20	F2RL1 (ENSCLAG00000010304) #22	S100Z (ENSCLAG00000010354) #23	CRHBP (ENSCLAG00000009942) #24	AGGF1 (ENSCLAG00000012928) #25	PDE8B (ENSCLAG00000011619) #27	WDR41 (ENSCLAG00000010095) #28	OTP (ENSCLAG00000011647) #29	TBCA (ENSCLAG00000011463) #30	AP3B1 (ENSCLAG00000017374) #31	ENSCLAG00000017966	SCAMP1 (ENSCLAG00000010430) #33	LHFPL2 (ENSCLAG00000010028) #34	ENSCLAG00000009820	ARSB (ENSCLAG00000013316) #36	DMGDH (ENSCLAG00000014854) #37	BHMT2 (ENSCLAG00000013633)
Guinea pig	MODERN SPECIES	29												SV2C (ENSCPOG00000008567) #18	IQGAP2 (ENSCPOG00000025031) #20	F2RL2 (ENSCPOG00000002801) #19	F2R (ENSCPOG00000032667) #21	F2RL1 (ENSCPOG00000033414) #22	S100Z (ENSCPOG00000030952) #23	CRHBP (ENSCPOG00000002422) #24	ENSCPOG00000009626	ENSCPOG00000035041	ELOVL7 (ENSCPOG00000037993)	DEPDC1B (ENSCPOG00000011483)	PDE4D (ENSCPOG00000004873)	ENSCPOG00000039531	RAB3C (ENSCPOG00000001394)	PLK2 (ENSCPOG00000021250)	ACTBL2 (ENSCPOG00000011023)	GPBP1 (ENSCPOG00000012341)	ENSCPOG00000015027	SETD9 (ENSCPOG00000015025)	MAP3K1 (ENSCPOG00000015017)
Naked mole-rat female	MODERN SPECIES		USP42 (ENSHGLG00000018062)	ENSHGLG00000035813	EIF2AK1 (ENSHGLG00000015194)	ANKRD61 (ENSHGLG00000005518)	AIMP2 (ENSHGLG00000041958)	PMS2 (ENSHGLG00000007741)	ENSHGLG00000038861	ENSHGLG00000010064	ENSHGLG00000007267	ENSHGLG00000009254	ENSHGLG00000020676	ENSHGLG00000013637	LMTK2 (ENSHGLG00000013780)	BHLHA15 (ENSHGLG00000033900)	TECPR1 (ENSHGLG00000018344)	ENSHGLG00000015104 #22	ENSHGLG00000013687	ENSHGLG00000032492	BAIAP2L1 (ENSHGLG00000017707)	ENSHGLG00000044552	ENSHGLG00000007737	ENSHGLG00000042548	TMEM130 (ENSHGLG00000008380)	TRRAP (ENSHGLG00000013805)	SMURF1 (ENSHGLG00000006003)	ENSHGLG00000009628	ENSHGLG00000043221	ENSHGLG00000017246	ARPC1B (ENSHGLG00000017816)	PDAP1 (ENSHGLG00000013857)	ENSHGLG00000018123
Atlantogenata	ANCESTRAL SPECIES		ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Elephant	MODERN SPECIES	526	HEXB (ENSLAFG00000018570)	GFM2 (ENSLAFG00000018575)	ENSLAFG00000009910 ##7	FAM169A (ENSLAFG00000009907) #9	GCNT4 (ENSLAFG00000027464) #10	ENSLAFG00000026415 #11	HMGCR (ENSLAFG00000013291) #12	CERT1 (ENSLAFG00000013294) #13	POLK (ENSLAFG00000013297) #14	ANKDD1B (ENSLAFG00000020937) #15	POC5 (ENSLAFG00000014703) #16	SV2C (ENSLAFG00000003003) #18	IQGAP2 (ENSLAFG00000000760) #20	F2RL2 (ENSLAFG00000029045) #19	F2R (ENSLAFG00000003741) #21	F2RL1 (ENSLAFG00000001287) #22	S100Z (ENSLAFG00000013035) #23	CRHBP (ENSLAFG00000013037) #24	ENSLAFG00000027371	AGGF1 (ENSLAFG00000012029) #25	ZBED3 (ENSLAFG00000001192) #26	PDE8B (ENSLAFG00000015612) #27	WDR41 (ENSLAFG00000005066) #28	OTP (ENSLAFG00000007704) #29	TBCA (ENSLAFG00000005316) #30	AP3B1 (ENSLAFG00000010496) #31	SCAMP1 (ENSLAFG00000009372) #33	LHFPL2 (ENSLAFG00000009378) #34	ARSB (ENSLAFG00000018055) #36	DMGDH (ENSLAFG00000018061) #37	BHMT2 (ENSLAFG00000018070)
Hyrax	MODERN SPECIES	4742																F2RL1 (ENSPCAG00000014686) #22
Tenrec	MODERN SPECIES	5618																F2RL1 (ENSETEG00000008704) #22
Xenarthra	ANCESTRAL SPECIES	234						ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26
Sloth	MODERN SPECIES	5140																F2RL1 (ENSCHOG00000006792) #22
Armadillo	MODERN SPECIES	2327				ENSDNOG00000001464	HMGCR (ENSDNOG00000006472) #12	CERT1 (ENSDNOG00000037153) #13	POLK (ENSDNOG00000003405) #14	ANKDD1B (ENSDNOG00000025636) #15	POC5 (ENSDNOG00000010175) #16	ENSDNOG00000035029	ENSDNOG00000034724	SV2C (ENSDNOG00000005312) #18	IQGAP2 (ENSDNOG00000005342) #20	F2RL2 (ENSDNOG00000035458) #19	F2R (ENSDNOG00000047767) #21	F2RL1 (ENSDNOG00000010306) #22	S100Z (ENSDNOG00000002472) #23	CRHBP (ENSDNOG00000015234) #24	AGGF1 (ENSDNOG00000018473) #25	ZBED3 (ENSDNOG00000041041) #26	ENSDNOG00000049258	ENSDNOG00000038167
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00980000201383.C	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Common wonbat	MODERN SPECIES	1011							HMGCR (ENSVURG00010016331) #12	CERT1 (ENSVURG00010016371) #13	POLK (ENSVURG00010016425) #14	ANKDD1B (ENSVURG00010016454) #15	POC5 (ENSVURG00010016492) #16	SV2C (ENSVURG00010016524) #18	IQGAP2 (ENSVURG00010016559) #20	F2RL2 (ENSVURG00010016587) #19	F2R (ENSVURG00010016592) #21	F2RL1 (ENSVURG00010016599) #22	S100Z (ENSVURG00010016607) #23	CRHBP (ENSVURG00010016624) #24	ENSVURG00010016641	ENSVURG00010016651 #25	ENSVURG00010016663	ENSVURG00010016681	PDE8B (ENSVURG00010016850) #27	WDR41 (ENSVURG00010019111) #28	OTP (ENSVURG00010019123) #29	ENSVURG00010019130	ENSVURG00010019136	AP3B1 (ENSVURG00010019144) #31	ENSVURG00010019164	SCAMP1 (ENSVURG00010019174) #33	LHFPL2 (ENSVURG00010019186) #34
koala	MODERN SPECIES	73	GFM2 (ENSPCIG00000020810)	NSA2 (ENSPCIG00000010269) ##7	FAM169A (ENSPCIG00000010270) #9	GCNT4 (ENSPCIG00000015727) #10	ENSPCIG00000015721	ENSPCIG00000027474	HMGCR (ENSPCIG00000027473) #12	CERT1 (ENSPCIG00000027317) #13	POLK (ENSPCIG00000027316) #14	ENSPCIG00000027312 #15	ENSPCIG00000027308 #16	SV2C (ENSPCIG00000027306) #18	F2RL2 (ENSPCIG00000029189) #19	IQGAP2 (ENSPCIG00000028736) #20	F2R (ENSPCIG00000002013) #21	F2RL1 (ENSPCIG00000002046) #22	S100Z (ENSPCIG00000036527) #23	CRHBP (ENSPCIG00000032088) #24	AGGF1 (ENSPCIG00000002077) #25	ENSPCIG00000002090	ENSPCIG00000002120	PDE8B (ENSPCIG00000002178) #27	WDR41 (ENSPCIG00000002260) #28	OTP (ENSPCIG00000014906) #29	ENSPCIG00000014903 #30	ENSPCIG00000017497 #31	ENSPCIG00000031686 #31	SCAMP1 (ENSPCIG00000024949) #33	LHFPL2 (ENSPCIG00000024952) #34	ARSB (ENSPCIG00000028419) #36	DMGDH (ENSPCIG00000013849) #37
Wallaby	MODERN SPECIES	14301																F2RL1 (ENSMEUG00000010830) #22
Tasmanian devil	MODERN SPECIES		HEXB (ENSSHAG00000017520)	GFM2 (ENSSHAG00000017593)	NSA2 (ENSSHAG00000017654) ##7	FAM169A (ENSSHAG00000017681) #9	GCNT4 (ENSSHAG00000018019) #10	ENSSHAG00000018123	HMGCR (ENSSHAG00000004177) #12	CERT1 (ENSSHAG00000004954) #13	POLK (ENSSHAG00000006899) #14	ANKDD1B (ENSSHAG00000028889) #15	POC5 (ENSSHAG00000008712) #16	SV2C (ENSSHAG00000011331) #18	F2RL2 (ENSSHAG00000028606) #19	IQGAP2 (ENSSHAG00000001152) #20	F2R (ENSSHAG00000009153) #21	F2RL1 (ENSSHAG00000008088) #22	S100Z (ENSSHAG00000028739) #23	CRHBP (ENSSHAG00000006864) #24	AGGF1 (ENSSHAG00000004570) #25	PDE8B (ENSSHAG00000018263) #27	WDR41 (ENSSHAG00000018180) #28	OTP (ENSSHAG00000018090) #29	TBCA (ENSSHAG00000025953) #30	AP3B1 (ENSSHAG00000017224) #31	SCAMP1 (ENSSHAG00000016943) #33	LHFPL2 (ENSSHAG00000028883) #34	ARSB (ENSSHAG00000015401) #36	DMGDH (ENSSHAG00000014992) #37	BHMT2 (ENSSHAG00000014959)	BHMT (ENSSHAG00000014860)	JMY (ENSSHAG00000014317)
Opossum	MODERN SPECIES	2	AP3B1 (ENSMODG00000019733) #31	ENSMODG00000050949	ENSMODG00000050562 #30	OTP (ENSMODG00000019736) #29	WDR41 (ENSMODG00000019738) #28	PDE8B (ENSMODG00000019740) #27	ENSMODG00000044321	ENSMODG00000025309	AGGF1 (ENSMODG00000019743) #25	CRHBP (ENSMODG00000019745) #24	S100Z (ENSMODG00000019747) #23	ENSMODG00000013568 #20	F2RL2 (ENSMODG00000036999) #19	F2R (ENSMODG00000013575) #21	ENSMODG00000038124	F2RL1 (ENSMODG00000013578) #22	PHAX (ENSMODG00000000986)	ALDH7A1 (ENSMODG00000001001)	GRAMD2B (ENSMODG00000001027)	ENSMODG00000044426	ZNF608 (ENSMODG00000001045)	ENSMODG00000027439	ENSMODG00000001216	GADD45G (ENSMODG00000001225)	ENSMODG00000001247	ENSMODG00000001250	MAN2A1 (ENSMODG00000001310)	ENSMODG00000038325	ENSMODG00000001327	FER (ENSMODG00000001390)	ENSMODG00000049495
Sauria	ANCESTRAL SPECIES	5	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Archosauria	ANCESTRAL SPECIES	1	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Aves	ANCESTRAL SPECIES	4	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Neognathae	ANCESTRAL SPECIES	12	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Anatidae	ANCESTRAL SPECIES	20	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00960000189505	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Pink-footed goose	MODERN SPECIES	183	HEXB (ENSABRG00000000318)	GFM2 (ENSABRG00000000353)	NSA2 (ENSABRG00000000420) #7	FAM169A (ENSABRG00000000439) #9	GCNT4 (ENSABRG00000000468) #10	ENSABRG00000000482 #11	HMGCR (ENSABRG00000000510) #12	MED18 (ENSABRG00000000557)	CERT1 (ENSABRG00000000564) #13	POLK (ENSABRG00000002261) #14	ANKDD1B (ENSABRG00000002279) #15	ENSABRG00000002309	SV2C (ENSABRG00000002343) #18	IQGAP2 (ENSABRG00000003611) #20	F2RL2 (ENSABRG00000014500) #19	F2RL1 (ENSABRG00000014503) #22	F2R (ENSABRG00000014507) #21
Duck	MODERN SPECIES	4281	NSA2 (ENSAPLG00000007082) #7	FAM169A (ENSAPLG00000006999) #9	GCNT4 (ENSAPLG00000018100) #10	ENSAPLG00000006971 #11	HMGCR (ENSAPLG00000006209) #12	MED18 (ENSAPLG00000006194)	CERT1 (ENSAPLG00000005669) #13	POLK (ENSAPLG00000005033) #14	ANKDD1B (ENSAPLG00000004990) #15	ENSAPLG00000004910	ENSAPLG00000021753	SV2C (ENSAPLG00000004492) #18	F2RL2 (ENSAPLG00000004486) #19	IQGAP2 (ENSAPLG00000002992) #20	F2R (ENSAPLG00000001030) #21	F2RL1 (ENSAPLG00000028669) #22	S100Z (ENSAPLG00000002758) #23	CRHBP (ENSAPLG00000002564) #24	AGGF1 (ENSAPLG00000001528) #25	ENSAPLG00000027714	PDE8B (ENSAPLG00000007395) #27	WDR41 (ENSAPLG00000007656) #28	ENSAPLG00000027407	ENSAPLG00000023605	AP3B1 (ENSAPLG00000013675) #31	ENSAPLG00000016508	SCAMP1 (ENSAPLG00000030262) #33	LHFPL2 (ENSAPLG00000018490) #34	ARSB (ENSAPLG00000009330) #36	DMGDH (ENSAPLG00000008567) #37	ENSAPLG00000008403
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.a #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01070000257240	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.a #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01070000257240	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Turkey	MODERN SPECIES	1299	FAM169A (ENSMGAG00000003916) #9	ENSMGAG00000021702	ENSMGAG00000001400	ENSMGAG00000022603	ENSMGAG00000022393 #11	ENSMGAG00000017664	ENSMGAG00000014911 #13	ENSMGAG00000004910	ENSMGAG00000017860 #14	ENSMGAG00000002014 #14	ENSMGAG00000022885 #13	SV2C (ENSMGAG00000004851) #18	F2RL2 (ENSMGAG00000016024) #19	IQGAP2 (ENSMGAG00000004823) #20	F2R (ENSMGAG00000020653) #21	F2RL1 (ENSMGAG00000016031) #22	S100Z (ENSMGAG00000020183) #23	CRHBP (ENSMGAG00000018504) #24	AGGF1 (ENSMGAG00000004796) #25	PDE8B (ENSMGAG00000004773) #27	WDR41 (ENSMGAG00000004765) #28	ENSMGAG00000019777	AP3B1 (ENSMGAG00000016635) #31	ENSMGAG00000018452 #33	LHFPL2 (ENSMGAG00000004731) #34	ENSMGAG00000009256	ARSB (ENSMGAG00000018561) #36	HOMER1 (ENSMGAG00000020868)	TENT2 (ENSMGAG00000017305)	ENSMGAG00000018641	MTX3 (ENSMGAG00000008907)
Japanese quail	MODERN SPECIES	699	NUP155 (ENSCJPG00005006933)	WDR70 (ENSCJPG00005007178)	GDNF (ENSCJPG00005007181)	EGFLAM (ENSCJPG00005007208)	LIFR (ENSCJPG00005007224)	ENSCJPG00005007226	RICTOR (ENSCJPG00005007227)	FYB1 (ENSCJPG00005007860)	ENSCJPG00005007870	ENSCJPG00005007873	PTGER4 (ENSCJPG00005007909)	TTC33 (ENSCJPG00005007920)	PRKAA1 (ENSCJPG00005007921)	RPL37 (ENSCJPG00005007923)	ENSCJPG00005007926	F2RL1 (ENSCJPG00005007928) #22	S100Z (ENSCJPG00005007930) #23	CRHBP (ENSCJPG00005007931) #24	AGGF1 (ENSCJPG00005007934) #25	PDE8B (ENSCJPG00005007937) #27	WDR41 (ENSCJPG00005007966) #28	OTP (ENSCJPG00005007969) #29	TBCA (ENSCJPG00005007972) #30	AP3B1 (ENSCJPG00005007978) #31	SCAMP1 (ENSCJPG00005007980) #33	LHFPL2 (ENSCJPG00005007982) #34	ARSB (ENSCJPG00005007983) #36	DMGDH (ENSCJPG00005007984) #37	ENSCJPG00005007985	JMY (ENSCJPG00005007986)	HOMER1 (ENSCJPG00005008006)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.b #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Golden eagle	MODERN SPECIES	91	GFM2 (ENSACCG00020010560)	NSA2 (ENSACCG00020010586) #7	FAM169A (ENSACCG00020010593) #9	GCNT4 (ENSACCG00020010610) #10	ENSACCG00020010622 #11	HMGCR (ENSACCG00020010636) #12	MED18 (ENSACCG00020010650)	CERT1 (ENSACCG00020010683) #13	POLK (ENSACCG00020010794) #14	ANKDD1B (ENSACCG00020010842) #15	ENSACCG00020010857	SV2C (ENSACCG00020010876) #18	IQGAP2 (ENSACCG00020010944) #20	F2RL2 (ENSACCG00020011007) #19	F2R (ENSACCG00020011014) #21	F2RL1 (ENSACCG00020011018) #22	S100Z (ENSACCG00020011028) #23	CRHBP (ENSACCG00020011040) #24	AGGF1 (ENSACCG00020011059) #25	PDE8B (ENSACCG00020011101) #27	WDR41 (ENSACCG00020011137) #28	OTP (ENSACCG00020011154) #29	TBCA (ENSACCG00020011162) #30	AP3B1 (ENSACCG00020011192) #31	SCAMP1 (ENSACCG00020011232) #33	LHFPL2 (ENSACCG00020011242) #34	ARSB (ENSACCG00020011260) #36	DMGDH (ENSACCG00020011281) #37	ENSACCG00020011296	JMY (ENSACCG00020011307)	HOMER1 (ENSACCG00020011321)
Kakapo	MODERN SPECIES	19	GFM2 (ENSSHBG00005020784)	NSA2 (ENSSHBG00005021010) #7	ENSSHBG00005021012 #9	GCNT4 (ENSSHBG00005000099) #10	ENSSHBG00005000109 #11	HMGCR (ENSSHBG00005000137) #12	MED18 (ENSSHBG00005000150)	ENSSHBG00005010064 #13	POLK (ENSSHBG00005010150) #14	ANKDD1B (ENSSHBG00005010251) #15	ENSSHBG00005010286	SV2C (ENSSHBG00005010367) #18	IQGAP2 (ENSSHBG00005010448) #20	F2RL2 (ENSSHBG00005010691) #19	F2R (ENSSHBG00005010723) #21	F2RL1 (ENSSHBG00005010738) #22	S100Z (ENSSHBG00005010751) #23	CRHBP (ENSSHBG00005010788) #24	AGGF1 (ENSSHBG00005010807) #25	PDE8B (ENSSHBG00005010892) #27	WDR41 (ENSSHBG00005011087) #28	OTP (ENSSHBG00005011114) #29	TBCA (ENSSHBG00005011141) #30	AP3B1 (ENSSHBG00005011362) #31	SCAMP1 (ENSSHBG00005012135) #33	LHFPL2 (ENSSHBG00005012173) #34	ARSB (ENSSHBG00005012188) #36	DMGDH (ENSSHBG00005012214) #37	ENSSHBG00005012228	ENSSHBG00005012252	ENSSHBG00005012268
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Great tit	MODERN SPECIES	642	GFM2 (ENSPMJG00000016165)	NSA2 (ENSPMJG00000016164) #7	FAM169A (ENSPMJG00000016163) #9	GCNT4 (ENSPMJG00000016162) #10	ENSPMJG00000016161 #11	HMGCR (ENSPMJG00000016159) #12	MED18 (ENSPMJG00000016158)	CERT1 (ENSPMJG00000016157) #13	ENSPMJG00000016156	POLK (ENSPMJG00000016155) #14	ENSPMJG00000016154	SV2C (ENSPMJG00000016153) #18	F2RL2 (ENSPMJG00000016152) #19	IQGAP2 (ENSPMJG00000016151) #20	F2R (ENSPMJG00000016150) #21	F2RL1 (ENSPMJG00000016149) #22	S100Z (ENSPMJG00000016148) #23	CRHBP (ENSPMJG00000016147) #24	PDE8B (ENSPMJG00000016145) #27	AGGF1 (ENSPMJG00000016144) #25	WDR41 (ENSPMJG00000016143) #28	OTP (ENSPMJG00000016142) #29	TBCA (ENSPMJG00000016141) #30	AP3B1 (ENSPMJG00000016140) #31	SCAMP1 (ENSPMJG00000016139) #33	LHFPL2 (ENSPMJG00000016138) #34	ARSB (ENSPMJG00000016137) #36	DMGDH (ENSPMJG00000016136) #37	ENSPMJG00000016135	JMY (ENSPMJG00000016134)	HOMER1 (ENSPMJG00000016133)
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Flycatcher	MODERN SPECIES	561	GFM2 (ENSFALG00000010106)	NSA2 (ENSFALG00000010090) #7	FAM169A (ENSFALG00000027800) #9	ENSFALG00000026352	GCNT4 (ENSFALG00000014564) #10	ENSFALG00000028313	HMGCR (ENSFALG00000010078) #12	ENSFALG00000014553	CERT1 (ENSFALG00000010073) #13	POLK (ENSFALG00000010061) #14	ENSFALG00000010043	SV2C (ENSFALG00000010041) #18	F2RL2 (ENSFALG00000026321) #19	IQGAP2 (ENSFALG00000010034) #20	F2R (ENSFALG00000010030) #21	F2RL1 (ENSFALG00000014541) #22	S100Z (ENSFALG00000028933) #23	CRHBP (ENSFALG00000010024) #24	AGGF1 (ENSFALG00000010018) #25	PDE8B (ENSFALG00000010015) #27	WDR41 (ENSFALG00000010010) #28	TBCA (ENSFALG00000027625) #30	AP3B1 (ENSFALG00000009993) #31	SCAMP1 (ENSFALG00000009973) #33	LHFPL2 (ENSFALG00000025830) #34	ARSB (ENSFALG00000027321) #36	DMGDH (ENSFALG00000009949) #37	ENSFALG00000026736	JMY (ENSFALG00000009914)	HOMER1 (ENSFALG00000009906)	TENT2 (ENSFALG00000009901)
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Passeroidea	ANCESTRAL SPECIES	23	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31
Common canary	MODERN SPECIES	25	GFM2 (ENSSCAG00000004828)	NSA2 (ENSSCAG00000004842) #7	FAM169A (ENSSCAG00000004849) #9	ENSSCAG00000004859	GCNT4 (ENSSCAG00000004865) #10	ENSSCAG00000004870 #11	HMGCR (ENSSCAG00000004885) #12	ENSSCAG00000004892 #13	POLK (ENSSCAG00000004901) #14	ANKDD1B (ENSSCAG00000004916) #15	ENSSCAG00000004934	SV2C (ENSSCAG00000004946) #18	IQGAP2 (ENSSCAG00000004970) #20	F2RL2 (ENSSCAG00000005003) #19	F2R (ENSSCAG00000005008) #21	F2RL1 (ENSSCAG00000005013) #22	S100Z (ENSSCAG00000005020) #23	CRHBP (ENSSCAG00000005029) #24	AGGF1 (ENSSCAG00000005040) #25	PDE8B (ENSSCAG00000005086) #27	WDR41 (ENSSCAG00000005134) #28	TBCA (ENSSCAG00000005139) #30	AP3B1 (ENSSCAG00000005147) #31	MTX3 (ENSSCAG00000005156)	ENSSCAG00000005348	SERINC5 (ENSSCAG00000006465)	CDK7 (ENSSCAG00000006471)	ENSSCAG00000006477	CENPH (ENSSCAG00000006479)	SLC30A5 (ENSSCAG00000006486)	ENSSCAG00000006494 #33
Medium ground finch	MODERN SPECIES	143												SV2C (ENSGFOG00000011368) #18	F2RL2 (ENSGFOG00000011362) #19	IQGAP2 (ENSGFOG00000010045) #20	F2R (ENSGFOG00000009977) #21	F2RL1 (ENSGFOG00000009974) #22	S100Z (ENSGFOG00000009967) #23	CRHBP (ENSGFOG00000009960) #24	AGGF1 (ENSGFOG00000009755) #25	PDE8B (ENSGFOG00000009122) #27	WDR41 (ENSGFOG00000009104) #28	ENSGFOG00000009093	AP3B1 (ENSGFOG00000009046) #31	ENSGFOG00000009028 #33	LHFPL2 (ENSGFOG00000009025) #34	ARSB (ENSGFOG00000009010) #36	DMGDH (ENSGFOG00000008906) #37	ENSGFOG00000008891	JMY (ENSGFOG00000008880)	HOMER1 (ENSGFOG00000008874)	TENT2 (ENSGFOG00000008863)
African ostrich	MODERN SPECIES	1070	ENC1 (ENSSCUG00000018980)	HEXB (ENSSCUG00000018982)	GFM2 (ENSSCUG00000018983)	NSA2 (ENSSCUG00000018985) #7	FAM169A (ENSSCUG00000018986) #9	GCNT4 (ENSSCUG00000018988) #10	ENSSCUG00000018991 #11	HMGCR (ENSSCUG00000018992) #12	MED18 (ENSSCUG00000018993)	CERT1 (ENSSCUG00000018994) #13	POLK (ENSSCUG00000018995) #14	ENSSCUG00000018996	IQGAP2 (ENSSCUG00000012832) #20	F2RL2 (ENSSCUG00000012855) #19	F2R (ENSSCUG00000012856) #21	F2RL1 (ENSSCUG00000012858) #22	S100Z (ENSSCUG00000012861) #23	CRHBP (ENSSCUG00000012866) #24	AGGF1 (ENSSCUG00000012874) #25	PDE8B (ENSSCUG00000012877) #27	WDR41 (ENSSCUG00000012878) #28	TBCA (ENSSCUG00000012882) #30	ENSSCUG00000012883	AP3B1 (ENSSCUG00000012886) #31	SCAMP1 (ENSSCUG00000012902) #33	LHFPL2 (ENSSCUG00000012905) #34	ARSB (ENSSCUG00000012909) #36	DMGDH (ENSSCUG00000012911) #37	ENSSCUG00000012912	JMY (ENSSCUG00000012913)	HOMER1 (ENSSCUG00000012916)
Australian saltwater crocodile	MODERN SPECIES	29	GCNT4 (ENSCPRG00005000608) #10	ENSCPRG00005000598	HMGCR (ENSCPRG00005000561) #12	MED18 (ENSCPRG00005000551)	CERT1 (ENSCPRG00005000523) #13	POLK (ENSCPRG00005000468) #14	ANKDD1B (ENSCPRG00005000445) #15	ENSCPRG00005000427	ENSCPRG00005000416	ENSCPRG00005000401	SV2C (ENSCPRG00005000334) #18	ENSCPRG00005000328	F2RL2 (ENSCPRG00005000293) #19	IQGAP2 (ENSCPRG00005000163) #20	F2R (ENSCPRG00005000123) #21	F2RL1 (ENSCPRG00005000107) #22	S100Z (ENSCPRG00005017455) #23	CRHBP (ENSCPRG00005017451) #24	AGGF1 (ENSCPRG00005017448) #25	PDE8B (ENSCPRG00005017420) #27	WDR41 (ENSCPRG00005017397) #28	OTP (ENSCPRG00005017395) #29	TBCA (ENSCPRG00005017393) #30	AP3B1 (ENSCPRG00005017376) #31	SCAMP1 (ENSCPRG00005017372) #33	LHFPL2 (ENSCPRG00005017371) #34	ARSB (ENSCPRG00005017367) #36	DMGDH (ENSCPRG00005017362) #37	ENSCPRG00005017356	JMY (ENSCPRG00005017344)	HOMER1 (ENSCPRG00005017334)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354.c
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354.c
Emydidae	ANCESTRAL SPECIES	7	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00990000214262	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354.c
painted turtle	MODERN SPECIES	695	NSA2 (ENSCPBG00000000845) #7	FAM169A (ENSCPBG00000000858) #9	GCNT4 (ENSCPBG00000000877) #10	ENSCPBG00000000893 #11	HMGCR (ENSCPBG00000000934) #12	MED18 (ENSCPBG00000000959)	CERT1 (ENSCPBG00000000976) #13	POLK (ENSCPBG00000001045) #14	ANKDD1B (ENSCPBG00000001071) #15	ENSCPBG00000001139	SV2C (ENSCPBG00000001171) #18	ENSCPBG00000001231 #20	F2RL2 (ENSCPBG00000001709) #19	ENSCPBG00000001716 #20	F2R (ENSCPBG00000001721) #21	F2RL1 (ENSCPBG00000001729) #22	S100Z (ENSCPBG00000001741) #23	CRHBP (ENSCPBG00000001749) #24	AGGF1 (ENSCPBG00000001764) #25	PDE8B (ENSCPBG00000001910) #27	WDR41 (ENSCPBG00000004211) #28	OTP (ENSCPBG00000004217) #29	TBCA (ENSCPBG00000004229) #30	AP3B1 (ENSCPBG00000004265) #31
Three-toed box turtle	MODERN SPECIES	29	FAM169A (ENSTMTG00000010844) #9	GCNT4 (ENSTMTG00000010834) #10	ENSTMTG00000010801 #11	HMGCR (ENSTMTG00000010742) #12	MED18 (ENSTMTG00000010732)	CERT1 (ENSTMTG00000010650) #13	POLK (ENSTMTG00000010623) #14	ANKDD1B (ENSTMTG00000010565) #15	ENSTMTG00000010543	ENSTMTG00000010519	SV2C (ENSTMTG00000010477) #18	ENSTMTG00000010456	F2RL2 (ENSTMTG00000010445) #19	IQGAP2 (ENSTMTG00000010288) #20	F2R (ENSTMTG00000010274) #21	F2RL1 (ENSTMTG00000010266) #22	S100Z (ENSTMTG00000010247) #23	CRHBP (ENSTMTG00000010221) #24	AGGF1 (ENSTMTG00000010202) #25	PDE8B (ENSTMTG00000010141) #27	WDR41 (ENSTMTG00000010122) #28	OTP (ENSTMTG00000019954) #29	TBCA (ENSTMTG00000019947) #30	AP3B1 (ENSTMTG00000019939) #31	SCAMP1 (ENSTMTG00000019932) #33	LHFPL2 (ENSTMTG00000019928) #34	ARSB (ENSTMTG00000019924) #36	DMGDH (ENSTMTG00000019910) #37	ENSTMTG00000019899	JMY (ENSTMTG00000019893)	HOMER1 (ENSTMTG00000019867)
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354.c
Goode s thornscrub tortoise	MODERN SPECIES	20	NSA2 (ENSGEVG00005002481) #7	FAM169A (ENSGEVG00005002497) #9	GCNT4 (ENSGEVG00005002526) #10	ENSGEVG00005002534 #11	HMGCR (ENSGEVG00005002550) #12	MED18 (ENSGEVG00005002570)	CERT1 (ENSGEVG00005002596) #13	POLK (ENSGEVG00005002673) #14	ANKDD1B (ENSGEVG00005002744) #15	ENSGEVG00005002779	SV2C (ENSGEVG00005002796) #18	ENSGEVG00005002861	IQGAP2 (ENSGEVG00005004397) #20	F2RL2 (ENSGEVG00005017004) #19	F2R (ENSGEVG00005017019) #21	F2RL1 (ENSGEVG00005017035) #22	S100Z (ENSGEVG00005017053) #23	CRHBP (ENSGEVG00005017082) #24	AGGF1 (ENSGEVG00005017135) #25	PDE8B (ENSGEVG00005017191) #27	WDR41 (ENSGEVG00005017322) #28	OTP (ENSGEVG00005017397) #29	TBCA (ENSGEVG00005017424) #30	AP3B1 (ENSGEVG00005017453) #31	SCAMP1 (ENSGEVG00005017551) #33	LHFPL2 (ENSGEVG00005017571) #34	ARSB (ENSGEVG00005017597) #36	DMGDH (ENSGEVG00005017878) #37	ENSGEVG00005019199	JMY (ENSGEVG00005019239)	ENSGEVG00005019265
Abingdon island giant tortoise	MODERN SPECIES	25												SV2C (ENSCABG00000012314) #18	IQGAP2 (ENSCABG00000012321) #20	F2RL2 (ENSCABG00000012438) #19	F2R (ENSCABG00000012440) #21	F2RL1 (ENSCABG00000012443) #22	S100Z (ENSCABG00000012444) #23
Chinese turtle	MODERN SPECIES	769													ENSPSIG00000012702 #20	F2RL2 (ENSPSIG00000000934) #19	F2R (ENSPSIG00000013235) #21	F2RL1 (ENSPSIG00000000941) #22	S100Z (ENSPSIG00000013240) #23	CRHBP (ENSPSIG00000013255) #24	AGGF1 (ENSPSIG00000014397) #25	PDE8B (ENSPSIG00000014953) #27	WDR41 (ENSPSIG00000015621) #28	OTP (ENSPSIG00000015830) #29	TBCA (ENSPSIG00000015832) #30	AP3B1 (ENSPSIG00000015957) #31	SCAMP1 (ENSPSIG00000005353) #33	LHFPL2 (ENSPSIG00000006003) #34	ARSB (ENSPSIG00000006010) #36	ENSPSIG00000000958	DMGDH (ENSPSIG00000006338) #37	ENSPSIG00000006482	JMY (ENSPSIG00000007866)
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Episquamata	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Mainland tiger snake	MODERN SPECIES	33	HEXB (ENSNSUG00000010836)	GFM2 (ENSNSUG00000010550)	NSA2 (ENSNSUG00000010546) #7	FAM169A (ENSNSUG00000010538) #9	GCNT4 (ENSNSUG00000010536) #10	HMGCR (ENSNSUG00000010526) #12	CERT1 (ENSNSUG00000010520) #13	POLK (ENSNSUG00000010513) #14	ANKDD1B (ENSNSUG00000010511) #15	ENSNSUG00000010508	SV2C (ENSNSUG00000010481) #18	F2RL2 (ENSNSUG00000010480) #19	IQGAP2 (ENSNSUG00000008168) #20	ENSNSUG00000008166 #21	ENSNSUG00000008165 #21	F2RL1 (ENSNSUG00000008164) #22	S100Z (ENSNSUG00000008153) #23	CRHBP (ENSNSUG00000008150) #24	AGGF1 (ENSNSUG00000008042) #25	PDE8B (ENSNSUG00000007470) #27	ENSNSUG00000007467 #28	OTP (ENSNSUG00000007466) #29	ENSNSUG00000007432 #30	AP3B1 (ENSNSUG00000007370) #31	SCAMP1 (ENSNSUG00000007366) #33	LHFPL2 (ENSNSUG00000007360) #34	ARSB (ENSNSUG00000007357) #36	DMGDH (ENSNSUG00000007356) #37	ENSNSUG00000007351	JMY (ENSNSUG00000007346)	HOMER1 (ENSNSUG00000007342)
Eastern brown snake	MODERN SPECIES	2	HEXB (ENSPTXG00000002700)	GFM2 (ENSPTXG00000002694)	NSA2 (ENSPTXG00000002688) #7	FAM169A (ENSPTXG00000002682) #9	GCNT4 (ENSPTXG00000002679) #10	HMGCR (ENSPTXG00000002673) #12	CERT1 (ENSPTXG00000002617) #13	POLK (ENSPTXG00000002608) #14	ANKDD1B (ENSPTXG00000002606) #15	ENSPTXG00000002603	SV2C (ENSPTXG00000002599) #18	F2RL2 (ENSPTXG00000002598) #19	IQGAP2 (ENSPTXG00000002592) #20	ENSPTXG00000002587 #21	ENSPTXG00000002586 #21	F2RL1 (ENSPTXG00000002584) #22	S100Z (ENSPTXG00000002582) #23	CRHBP (ENSPTXG00000002580) #24	AGGF1 (ENSPTXG00000002575) #25	PDE8B (ENSPTXG00000002569) #27	WDR41 (ENSPTXG00000002565) #28	OTP (ENSPTXG00000002560) #29	TBCA (ENSPTXG00000002558) #30	AP3B1 (ENSPTXG00000002552) #31	SCAMP1 (ENSPTXG00000002548) #33	LHFPL2 (ENSPTXG00000002546) #34	ARSB (ENSPTXG00000002543) #36	DMGDH (ENSPTXG00000002538) #37	ENSPTXG00000002535	JMY (ENSPTXG00000002530)	HOMER1 (ENSPTXG00000002526)
Blue-lipped sea krait	MODERN SPECIES	10023																F2RL1 (ENSLLTG00000006569) #22	S100Z (ENSLLTG00000006552) #23
Indian cobra	MODERN SPECIES	1	NSA2 (ENSNNAG00000006166) #7	FAM169A (ENSNNAG00000006185) #9	GCNT4 (ENSNNAG00000006323) #10	HMGCR (ENSNNAG00000006352) #12	CERT1 (ENSNNAG00000006429) #13	POLK (ENSNNAG00000006564) #14	ANKDD1B (ENSNNAG00000006589) #15	ENSNNAG00000006634	SV2C (ENSNNAG00000006660) #18	ENSNNAG00000006703 ##20	ENSNNAG00000006718	F2RL2 (ENSNNAG00000006742) #19	IQGAP2 (ENSNNAG00000006766) #20	ENSNNAG00000003737 #21	ENSNNAG00000003747 #21	F2RL1 (ENSNNAG00000003782) #22	S100Z (ENSNNAG00000003790) #23	CRHBP (ENSNNAG00000003821) #24	AGGF1 (ENSNNAG00000003959) #25	ENSNNAG00000004588	PDE8B (ENSNNAG00000004615) #27	WDR41 (ENSNNAG00000004669) #28	OTP (ENSNNAG00000004735) #29	TBCA (ENSNNAG00000004751) #30	AP3B1 (ENSNNAG00000004770) #31	SCAMP1 (ENSNNAG00000004867) #33	LHFPL2 (ENSNNAG00000004879) #34	ENSNNAG00000004894 #36	ENSNNAG00000004946 #36	DMGDH (ENSNNAG00000004972) #37	ENSNNAG00000005025 #37
Lizard	MODERN SPECIES	1	ENSACAG00000041697	HMGCR (ENSACAG00000008698) #12	CERT1 (ENSACAG00000008556) #13	POLK (ENSACAG00000008458) #14	ANKDD1B (ENSACAG00000008414) #15	ENSACAG00000022708	ENSACAG00000008393	SV2C (ENSACAG00000008315) #18	ENSACAG00000043111	ENSACAG00000035710	ENSACAG00000041042	F2RL2 (ENSACAG00000008312) #19	IQGAP2 (ENSACAG00000007992) #20	ENSACAG00000037432 #21	ENSACAG00000037420 #21	F2RL1 (ENSACAG00000007980) #22	S100Z (ENSACAG00000036691) #23	CRHBP (ENSACAG00000007916) #24	AGGF1 (ENSACAG00000007847) #25	PDE8B (ENSACAG00000007748) #27	WDR41 (ENSACAG00000007717) #28	OTP (ENSACAG00000030602) #29	tbca (ENSACAG00000035436) #30	AP3B1 (ENSACAG00000007430) #31	SCAMP1 (ENSACAG00000012476) #33	LHFPL2 (ENSACAG00000012574) #34	ENSACAG00000040664	ARSB (ENSACAG00000016838) #36	DMGDH (ENSACAG00000016799) #37	ENSACAG00000016768	JMY (ENSACAG00000016753)
Laterata	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a	ENSGT00940000156354
Common wall lizard	MODERN SPECIES	2	GCNT4 (ENSPMRG00000017109) #10	HMGCR (ENSPMRG00000017104) #12	CERT1 (ENSPMRG00000017088) #13	ENSPMRG00000017083	POLK (ENSPMRG00000017080) #14	ANKDD1B (ENSPMRG00000017071) #15	ENSPMRG00000017062	SV2C (ENSPMRG00000017039) #18	F2RL2 (ENSPMRG00000017024) #19	IQGAP2 (ENSPMRG00000016986) #20	ENSPMRG00000016977	ENSPMRG00000016973 #21	ENSPMRG00000016969 #21	ENSPMRG00000016964 #21	ENSPMRG00000016958 #21	F2RL1 (ENSPMRG00000016949) #22	S100Z (ENSPMRG00000016943) #23	CRHBP (ENSPMRG00000016936) #24	AGGF1 (ENSPMRG00000016929) #25	PDE8B (ENSPMRG00000016915) #27	WDR41 (ENSPMRG00000016907) #28	OTP (ENSPMRG00000016904) #29	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016887	ENSPMRG00000016877 #31	ENSPMRG00000016558 #31	SCAMP1 (ENSPMRG00000016489) #33	ENSPMRG00000016483	LHFPL2 (ENSPMRG00000016477) #34	ARSB (ENSPMRG00000016472) #36
Argentine black and white tegu	MODERN SPECIES	10	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33	LHFPL2 (ENSSMRG00000002636) #34	ARSB (ENSSMRG00000002586) #36	DMGDH (ENSSMRG00000002569) #37	ENSSMRG00000002563	JMY (ENSSMRG00000002543)
tuatara	MODERN SPECIES	1540														ENSSPUG00000016211 #21	ENSSPUG00000016204 #21	F2RL1 (ENSSPUG00000016201) #22	S100Z (ENSSPUG00000016188) #23	CRHBP (ENSSPUG00000016153) #24	AGGF1 (ENSSPUG00000016142) #25	PDE8B (ENSSPUG00000015771) #27	WDR41 (ENSSPUG00000015653) #28	OTP (ENSSPUG00000015641) #29	TBCA (ENSSPUG00000015638) #30	AP3B1 (ENSSPUG00000015564) #31
Anura	ANCESTRAL SPECIES	9	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT01100000264050	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355	S100Z (ENSLLEG00000019309) #23	ENSLLEG00000019291	CRHBP (ENSLLEG00000019109) #24	AGGF1 (ENSLLEG00000018958) #25	ENSLLEG00000018871	ENSLLEG00000018821	ENSLLEG00000018804	PDE8B (ENSLLEG00000018182) #27
Frog	MODERN SPECIES		gfm2 (ENSXETG00000005076)	nsa2 (ENSXETG00000005077) #7	fam169a (ENSXETG00000031427) #9	gcnt4 (ENSXETG00000005081) #10	ankrd31 (ENSXETG00000048346)	hmgcr (ENSXETG00000005084) #12	cert1 (ENSXETG00000005085) #13	polk (ENSXETG00000005087) #14	ankdd1b (ENSXETG00000032144) #15	poc5 (ENSXETG00000003349)	sv2c (ENSXETG00000030792) #18	iqgap2 (ENSXETG00000003339) #20	f2rl2 (ENSXETG00000003340) #19	f2r (ENSXETG00000003338) #21	ENSXETG00000042651	f2rl1 (ENSXETG00000001420) #22	ENSXETG00000043113	crhbp (ENSXETG00000017080) #24	s100z (ENSXETG00000017078) #23	ENSXETG00000047318	aggf1 (ENSXETG00000017077) #25	pde8b (ENSXETG00000017075) #27	wdr41 (ENSXETG00000017074) #28	otp (ENSXETG00000035719) #29	tbca (ENSXETG00000016574) #30	ap3b1 (ENSXETG00000030391) #31	scamp1 (ENSXETG00000000547) #33	lhfpl2 (ENSXETG00000044028) #34	arsb (ENSXETG00000045303) #36	dmgdh (ENSXETG00000000527) #37	bhmt (ENSXETG00000000523)
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	354										SV2C (ENSLACG00000000841) #18	ENSLACG00000007149 ##20	F2RL2 (ENSLACG00000008066) #19	F2R (ENSLACG00000009553) #21	ENSLACG00000022384 #22	ENSLACG00000022473 #22	ENSLACG00000010563 #22	S100Z (ENSLACG00000011069) #23	CRHBP (ENSLACG00000011704) #24	AGGF1 (ENSLACG00000012448) #25	PDE8B (ENSLACG00000014400) #27	WDR41 (ENSLACG00000014972) #28	OTP (ENSLACG00000015564) #29	TBCA (ENSLACG00000015660) #30	AP3B1 (ENSLACG00000016462) #31	SCAMP1 (ENSLACG00000016971) #33	LHFPL2 (ENSLACG00000017142) #34	ARSB (ENSLACG00000017542) #36
Coelacanth	MODERN SPECIES	354											SV2C (ENSLACG00000000841) #18	ENSLACG00000007149 ##20	F2RL2 (ENSLACG00000008066) #19	F2R (ENSLACG00000009553) #21	ENSLACG00000022384 #22	ENSLACG00000022473 #22	ENSLACG00000010563 #22	S100Z (ENSLACG00000011069) #23	CRHBP (ENSLACG00000011704) #24	AGGF1 (ENSLACG00000012448) #25	PDE8B (ENSLACG00000014400) #27	WDR41 (ENSLACG00000014972) #28	OTP (ENSLACG00000015564) #29	TBCA (ENSLACG00000015660) #30	AP3B1 (ENSLACG00000016462) #31	SCAMP1 (ENSLACG00000016971) #33	LHFPL2 (ENSLACG00000017142) #34	ARSB (ENSLACG00000017542) #36
Coelacanth	MODERN SPECIES	354												SV2C (ENSLACG00000000841) #18	ENSLACG00000007149 ##20	F2RL2 (ENSLACG00000008066) #19	F2R (ENSLACG00000009553) #21	ENSLACG00000022384 #22	ENSLACG00000022473 #22	ENSLACG00000010563 #22	S100Z (ENSLACG00000011069) #23	CRHBP (ENSLACG00000011704) #24	AGGF1 (ENSLACG00000012448) #25	PDE8B (ENSLACG00000014400) #27	WDR41 (ENSLACG00000014972) #28	OTP (ENSLACG00000015564) #29	TBCA (ENSLACG00000015660) #30	AP3B1 (ENSLACG00000016462) #31	SCAMP1 (ENSLACG00000016971) #33	LHFPL2 (ENSLACG00000017142) #34	ARSB (ENSLACG00000017542) #36
Actinopterygii	ANCESTRAL SPECIES	45	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Reedfish	MODERN SPECIES	15	nsa2 (ENSECRG00000016209) #7	FAM169A (ENSECRG00000016228) #9	gcnt4a (ENSECRG00000016254) #10	ENSECRG00000016271	hmgcra (ENSECRG00000016297) #12	CERT1 (ENSECRG00000016356) #13	POLK (ENSECRG00000016538) #14	ANKDD1B (ENSECRG00000016596) #15	ENSECRG00000016654	ENSECRG00000016683	ENSECRG00000016694	sv2ca (ENSECRG00000016710) #18	iqgap2 (ENSECRG00000016760) ##20	F2RL2 (ENSECRG00000004843) #19	f2r2.1 (ENSECRG00000004853) #21	f2rl1.1 (ENSECRG00000004864) #22	ch25hl2 (ENSECRG00000004872)	ENSECRG00000004877	s100z (ENSECRG00000004884) #23	crhbp (ENSECRG00000004895) #24	aggf1 (ENSECRG00000004908) #25	PDE8B (ENSECRG00000004936) #27	wdr41 (ENSECRG00000004971) #28	otpa (ENSECRG00000004985) #29	tbca (ENSECRG00000004988) #30	AP3B1 (ENSECRG00000005004) #31	scamp1 (ENSECRG00000005024) #33	lhfpl2a (ENSECRG00000005036) #34	ARSB (ENSECRG00000005042) #36	DMGDH (ENSECRG00000005056) #37	bhmt (ENSECRG00000005095)
Neopterygii	ANCESTRAL SPECIES	26	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	658	FAM169A (ENSLOCG00000005396) #9	gcnt4a (ENSLOCG00000017524) #10	ENSLOCG00000005414 #11	hmgcra (ENSLOCG00000005433) #12	CERT1 (ENSLOCG00000005451) #13	POLK (ENSLOCG00000005477) #14	ANKDD1B (ENSLOCG00000005494) #15	ENSLOCG00000005510	sv2ca (ENSLOCG00000005520) #18	iqgap2 (ENSLOCG00000005540) ##20	F2RL2 (ENSLOCG00000017525) #19	F2R (ENSLOCG00000017526) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017528) #21	F2RL1 (ENSLOCG00000005575) #22	F2RL1 (ENSLOCG00000005593) #22	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654) #23	crhbp (ENSLOCG00000005670) #24	aggf1 (ENSLOCG00000005688) #25	PDE8B (ENSLOCG00000005705) #27	wdr41 (ENSLOCG00000005746) #28	otpa (ENSLOCG00000005761) #29	tbca (ENSLOCG00000005775) #30	AP3B1 (ENSLOCG00000005786) #31	scamp1 (ENSLOCG00000005808) #33	lhfpl2a (ENSLOCG00000005821) #34	ARSB (ENSLOCG00000005844) #36	DMGDH (ENSLOCG00000005858) #37	bhmt (ENSLOCG00000005877)
Spotted gar	MODERN SPECIES	658	nsa2 (ENSLOCG00000005380) #7	FAM169A (ENSLOCG00000005396) #9	gcnt4a (ENSLOCG00000017524) #10	ENSLOCG00000005414 #11	hmgcra (ENSLOCG00000005433) #12	CERT1 (ENSLOCG00000005451) #13	POLK (ENSLOCG00000005477) #14	ANKDD1B (ENSLOCG00000005494) #15	ENSLOCG00000005510	sv2ca (ENSLOCG00000005520) #18	iqgap2 (ENSLOCG00000005540) ##20	F2RL2 (ENSLOCG00000017525) #19	F2R (ENSLOCG00000017526) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017528) #21	F2RL1 (ENSLOCG00000005575) #22	F2RL1 (ENSLOCG00000005593) #22	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654) #23	crhbp (ENSLOCG00000005670) #24	aggf1 (ENSLOCG00000005688) #25	PDE8B (ENSLOCG00000005705) #27	wdr41 (ENSLOCG00000005746) #28	otpa (ENSLOCG00000005761) #29	tbca (ENSLOCG00000005775) #30	AP3B1 (ENSLOCG00000005786) #31	scamp1 (ENSLOCG00000005808) #33	lhfpl2a (ENSLOCG00000005821) #34	ARSB (ENSLOCG00000005844) #36	DMGDH (ENSLOCG00000005858) #37
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Perciformes	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.a.g #22
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Stickleback	MODERN SPECIES	13	enoph1 (ENSGACG00000015673)	sec31a (ENSGACG00000015685)	lin54 (ENSGACG00000015693)	cops4 (ENSGACG00000015697)	plac8.1 (ENSGACG00000015705)	ADAMTS6 (ENSGACG00000015707)	cwc27 (ENSGACG00000015712)	ppwd1 (ENSGACG00000015717)	trim23 (ENSGACG00000015730)	mzt2b (ENSGACG00000015736)	GCNT4 (ENSGACG00000015737) #10	hmgcrb (ENSGACG00000015741) #12	CERT1 (ENSGACG00000015744) #13	SV2C (ENSGACG00000015751) #18	F2RL2 (ENSGACG00000015753) #19	ENSGACG00000015755 #22	f2rl1.2 (ENSGACG00000015756) #22	ch25hl2 (ENSGACG00000015757)	s100z (ENSGACG00000015758) #23	crhbp (ENSGACG00000015759) #24	PDE8B (ENSGACG00000015761) #27	wdr41 (ENSGACG00000015762) #28	otpa (ENSGACG00000015770) #29	tbca (ENSGACG00000015771) #30	AP3B1 (ENSGACG00000015772) #31	ARSB (ENSGACG00000015775) #36	DMGDH (ENSGACG00000015777) #37	bhmt (ENSGACG00000015778)	JMY (ENSGACG00000015780)	HOMER1 (ENSGACG00000015784)	ENSGACG00000015792
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Tetraodon	MODERN SPECIES	19	enoph1 (ENSTNIG00000013498)	sec31a (ENSTNIG00000013497)	lin54 (ENSTNIG00000013496)	cops4 (ENSTNIG00000013495)	plac8.1 (ENSTNIG00000013494)	ADAMTS6 (ENSTNIG00000013493)	cwc27 (ENSTNIG00000013492)	ppwd1 (ENSTNIG00000013491)	trim23 (ENSTNIG00000013490)	lhx5 (ENSTNIG00000013489)	GCNT4 (ENSTNIG00000013488) #10	hmgcrb (ENSTNIG00000013487) #12	CERT1 (ENSTNIG00000013486) #13	SV2C (ENSTNIG00000013485) #18	F2RL2 (ENSTNIG00000013484) #19	ENSTNIG00000000913 #22	f2rl1.2 (ENSTNIG00000013483) #22	ch25hl2 (ENSTNIG00000013482)	s100z (ENSTNIG00000013481) #23	crhbp (ENSTNIG00000013480) #24	PDE8B (ENSTNIG00000013479) #27	wdr41 (ENSTNIG00000013478) #28	otpa (ENSTNIG00000013477) #29	tbca (ENSTNIG00000000561) #30	AP3B1 (ENSTNIG00000013476) #31	scamp1 (ENSTNIG00000013475) #33	lhfpl2a (ENSTNIG00000013474) #34	JMY (ENSTNIG00000013473)	ENSTNIG00000013472	DTWD2 (ENSTNIG00000013471)	tia1 (ENSTNIG00000013470)
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a
Clupeocephala	ANCESTRAL SPECIES	160	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00510000047710	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00940000153510.b	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00940000170540	ENSGT00940000159952.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Clown anemonefish	MODERN SPECIES	1313														F2RL2 (ENSAOCG00000001624) #19	f2r2.1 (ENSAOCG00000022288) #21	f2rl1.1 (ENSAOCG00000022291) #22	f2rl1.2 (ENSAOCG00000022302) #22	ch25hl2 (ENSAOCG00000022312)	s100z (ENSAOCG00000022366) #23	crhbp (ENSAOCG00000022382) #24	PDE8B (ENSAOCG00000022435) #27	wdr41 (ENSAOCG00000022458) #28	otpa (ENSAOCG00000001634) #29	tbca (ENSAOCG00000022489) #30	AP3B1 (ENSAOCG00000001638) #31	scamp1 (ENSAOCG00000022572) #33	ENSAOCG00000022604	taf6l (ENSAOCG00000022645)	cth1 (ENSAOCG00000001644)	mta2 (ENSAOCG00000022686)	ENSAOCG00000022694
Orange clownfish	MODERN SPECIES	7	ENSAPEG00000004780	lhx5 (ENSAPEG00000004769)	GCNT4 (ENSAPEG00000004763) #10	hmgcrb (ENSAPEG00000004677) #12	CERT1 (ENSAPEG00000004574) #13	ENSAPEG00000004515	SV2C (ENSAPEG00000004477) #18	ENSAPEG00000004446	ENSAPEG00000004414	ENSAPEG00000004380	ENSAPEG00000004369	ENSAPEG00000004345	SV2C (ENSAPEG00000004307) #18	F2RL2 (ENSAPEG00000004295) #19	f2r2.1 (ENSAPEG00000004248) #21	f2rl1.1 (ENSAPEG00000004237) #22	f2rl1.2 (ENSAPEG00000004215) #22	ch25hl2 (ENSAPEG00000004200)	s100z (ENSAPEG00000004132) #23	crhbp (ENSAPEG00000004114) #24	PDE8B (ENSAPEG00000003990) #27	wdr41 (ENSAPEG00000003933) #28	otpa (ENSAPEG00000003913) #29	tbca (ENSAPEG00000003898) #30	ENSAPEG00000003873	AP3B1 (ENSAPEG00000003852) #31	scamp1 (ENSAPEG00000003780) #33	lhfpl2a (ENSAPEG00000003763) #34	scamp1 (ENSAPEG00000003704) #33	ENSAPEG00000003682	scamp1 (ENSAPEG00000003628) #33
Spiny chromis	MODERN SPECIES	830											CERT1 (ENSAPOG00000017976) #13	ENSAPOG00000017894	SV2C (ENSAPOG00000000802) #18	F2RL2 (ENSAPOG00000017795) #19	f2r2.1 (ENSAPOG00000017788) #21	f2rl1.1 (ENSAPOG00000017781) #22	f2rl1.2 (ENSAPOG00000017767) #22	ch25hl2 (ENSAPOG00000017761)	s100z (ENSAPOG00000017741) #23	crhbp (ENSAPOG00000017678) #24	PDE8B (ENSAPOG00000017665) #27
Bicolor damselfish	MODERN SPECIES	1279												ENSSPAG00000013781	SV2C (ENSSPAG00000013822) #18	F2RL2 (ENSSPAG00000013850) #19	f2r2.1 (ENSSPAG00000013860) #21	f2rl1.1 (ENSSPAG00000013870) #22	f2rl1.2 (ENSSPAG00000013879) #22	ch25hl2 (ENSSPAG00000013882)	s100z (ENSSPAG00000013895) #23	crhbp (ENSSPAG00000013933) #24
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Burton s mouthbrooder	MODERN SPECIES	380														ENSHBUG00000006042 #21	F2R (ENSHBUG00000006089) #21	f2rl1.1 (ENSHBUG00000006111) #22	f2rl1.2 (ENSHBUG00000006100) #22	ch25hl2 (ENSHBUG00000006126)	s100z (ENSHBUG00000006132) #23	crhbp (ENSHBUG00000000153) #24	PDE8B (ENSHBUG00000006197) #27	wdr41 (ENSHBUG00000006222) #28	otpa (ENSHBUG00000006237) #29	tbca (ENSHBUG00000006256) #30	AP3B1 (ENSHBUG00000006320) #31	scamp1 (ENSHBUG00000006341) #33	lhfpl2a (ENSHBUG00000006355) #34	ARSB (ENSHBUG00000006398) #36	DMGDH (ENSHBUG00000006495) #37	bhmt (ENSHBUG00000006515)	JMY (ENSHBUG00000006526)
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
P. nyererei	MODERN SPECIES	297	cwc27 (ENSPNYG00000005384)	ppwd1 (ENSPNYG00000005473)	trim23 (ENSPNYG00000005520)	mzt2b (ENSPNYG00000005538)	lhx5 (ENSPNYG00000005549)	GCNT4 (ENSPNYG00000005563) #10	ENSPNYG00000005572	hmgcrb (ENSPNYG00000005594) #12	CERT1 (ENSPNYG00000005673) #13	SV2C (ENSPNYG00000005738) #18	F2RL2 (ENSPNYG00000005774) #19	F2RL2 (ENSPNYG00000005804) #19	F2R (ENSPNYG00000005812) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005859) #21	f2rl1.1 (ENSPNYG00000005869) #22	f2rl1.2 (ENSPNYG00000005884) #22	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915) #23	crhbp (ENSPNYG00000005959) #24	PDE8B (ENSPNYG00000005997) #27	wdr41 (ENSPNYG00000006061) #28	otpa (ENSPNYG00000006080) #29	tbca (ENSPNYG00000006104) #30	AP3B1 (ENSPNYG00000006176) #31	scamp1 (ENSPNYG00000006292) #33	lhfpl2a (ENSPNYG00000006322) #34	ARSB (ENSPNYG00000006334) #36	DMGDH (ENSPNYG00000006358) #37	bhmt (ENSPNYG00000006436)	JMY (ENSPNYG00000006512)
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Eastern happy	MODERN SPECIES	19	ppwd1 (ENSACLG00000025671)	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33	lhfpl2a (ENSACLG00000026258) #34	ARSB (ENSACLG00000026268) #36	ENSACLG00000026286	ENSACLG00000026291	DMGDH (ENSACLG00000026324) #37
Zebra mbuna	MODERN SPECIES	1110	cwc27 (ENSMZEG00005007217)	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34	ARSB (ENSMZEG00005006208) #36	ENSMZEG00005006197	DMGDH (ENSMZEG00005006121) #37	bhmt (ENSMZEG00005006090)
Lyretail cichlid	MODERN SPECIES	419	cops4 (ENSNBRG00000019754)	plac8.1 (ENSNBRG00000019785)	ADAMTS6 (ENSNBRG00000019825)	cwc27 (ENSNBRG00000019906)	ppwd1 (ENSNBRG00000019956)	trim23 (ENSNBRG00000019976)	mzt2b (ENSNBRG00000019985)	lhx5 (ENSNBRG00000019994)	GCNT4 (ENSNBRG00000020005) #10	hmgcrb (ENSNBRG00000020016) #12	CERT1 (ENSNBRG00000020026) #13	SV2C (ENSNBRG00000020050) #18	F2R (ENSNBRG00000020074) #21	F2RL2 (ENSNBRG00000020084) #19	F2R (ENSNBRG00000020103) #21	f2rl1.1 (ENSNBRG00000020117) #22	f2rl1.2 (ENSNBRG00000020123) #22	ch25hl2 (ENSNBRG00000020125)	s100z (ENSNBRG00000020136) #23	crhbp (ENSNBRG00000020174) #24	PDE8B (ENSNBRG00000020198) #27	wdr41 (ENSNBRG00000000420) #28	otpa (ENSNBRG00000000509) #29	tbca (ENSNBRG00000000529) #30	AP3B1 (ENSNBRG00000000578) #31
Nile tilapia	MODERN SPECIES	19	ppwd1 (ENSONIG00000015422)	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34	ARSB (ENSONIG00000015486) #36	slc1a1 (ENSONIG00000007386)	DMGDH (ENSONIG00000007381) #37	bhmt (ENSONIG00000007379)
Midas cichlid	MODERN SPECIES	991																f2rl1.1 (ENSACIG00000016939) #22	f2rl1.2 (ENSACIG00000016930) #22	ch25hl2 (ENSACIG00000016920)	s100z (ENSACIG00000016874) #23	crhbp (ENSACIG00000016747) #24	PDE8B (ENSACIG00000016694) #27	wdr41 (ENSACIG00000016654) #28	otpa (ENSACIG00000016644) #29	ENSACIG00000016630	AP3B1 (ENSACIG00000016606) #31	ENSACIG00000016574 #31	scamp1 (ENSACIG00000016545) #33	lhfpl2a (ENSACIG00000016531) #34	ARSB (ENSACIG00000016480) #36	DMGDH (ENSACIG00000016447) #37	bhmt (ENSACIG00000016426)
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.e #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Indian medaka	MODERN SPECIES	30	cops4 (ENSOMEG00000000468)	ENSOMEG00000018208	ADAMTS6 (ENSOMEG00000018187)	cwc27 (ENSOMEG00000018078)	ENSOMEG00000018032	ppwd1 (ENSOMEG00000017997)	trim23 (ENSOMEG00000017937)	mzt2b (ENSOMEG00000017910)	lhx5 (ENSOMEG00000017880)	hmgcrb (ENSOMEG00000017841) #12	GCNT4 (ENSOMEG00000017718) #10	CERT1 (ENSOMEG00000017675) #13	SV2C (ENSOMEG00000000862) #18	F2RL2 (ENSOMEG00000017449) #19	f2r2.1 (ENSOMEG00000017436) #21	f2rl1.1 (ENSOMEG00000017425) #22	f2rl1.2 (ENSOMEG00000017412) #22	ch25hl2 (ENSOMEG00000017408)	s100z (ENSOMEG00000017389) #23	crhbp (ENSOMEG00000017356) #24	PDE8B (ENSOMEG00000017299) #27	wdr41 (ENSOMEG00000017120) #28	otpa (ENSOMEG00000017048) #29	ENSOMEG00000017042	AP3B1 (ENSOMEG00000017029) #31	scamp1 (ENSOMEG00000016923) #33	lhfpl2a (ENSOMEG00000016802) #34	bhmt (ENSOMEG00000016763)	ARSB (ENSOMEG00000016709) #36	ENSOMEG00000016612 #37	JMY (ENSOMEG00000016581)
Javanese ricefish	MODERN SPECIES	3	lin54 (ENSOJAG00000008114)	cops4 (ENSOJAG00000008081)	plac8.1 (ENSOJAG00000008053)	ADAMTS6 (ENSOJAG00000007539)	cwc27 (ENSOJAG00000007407)	ppwd1 (ENSOJAG00000007397)	trim23 (ENSOJAG00000007342)	mzt2b (ENSOJAG00000007325)	lhx5 (ENSOJAG00000007311)	GCNT4 (ENSOJAG00000007303) #10	hmgcrb (ENSOJAG00000007200) #12	CERT1 (ENSOJAG00000007089) #13	SV2C (ENSOJAG00000006583) #18	F2RL2 (ENSOJAG00000006540) #19	f2r2.1 (ENSOJAG00000006533) #21	f2rl1.1 (ENSOJAG00000006526) #22	f2rl1.2 (ENSOJAG00000006457) #22	ch25hl2 (ENSOJAG00000006368)	s100z (ENSOJAG00000006352) #23	crhbp (ENSOJAG00000006339) #24	PDE8B (ENSOJAG00000006231) #27	wdr41 (ENSOJAG00000005989) #28	otpa (ENSOJAG00000005941) #29	tbca (ENSOJAG00000021072) #30	AP3B1 (ENSOJAG00000021042) #31	scamp1 (ENSOJAG00000021017) #33	ENSOJAG00000021004	lhfpl2a (ENSOJAG00000020996) #34	ARSB (ENSOJAG00000020969) #36	DMGDH (ENSOJAG00000020352) #37	bhmt (ENSOJAG00000020234)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000157329	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000181707	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Japanese Medaka HdrR	MODERN SPECIES	3	plac8.1 (ENSORLG00000024268)	ENSORLG00000025212	ADAMTS6 (ENSORLG00000001971)	cwc27 (ENSORLG00000001991)	ENSORLG00000030025	ppwd1 (ENSORLG00000002002)	trim23 (ENSORLG00000002016)	mzt2b (ENSORLG00000002030)	lhx5 (ENSORLG00000002044)	GCNT4 (ENSORLG00000002049) #10	hmgcrb (ENSORLG00000002060) #12	CERT1 (ENSORLG00000002149) #13	SV2C (ENSORLG00000002175) #18	F2RL2 (ENSORLG00000029096) #19	f2r2.1 (ENSORLG00000023591) #21	f2rl1.1 (ENSORLG00000022298) #22	f2rl1.2 (ENSORLG00000002198) #22	ch25hl2 (ENSORLG00000002205)	s100z (ENSORLG00000030634) #23	crhbp (ENSORLG00000002228) #24	PDE8B (ENSORLG00000002273) #27	wdr41 (ENSORLG00000002299) #28	otpa (ENSORLG00000022528) #29	tbca (ENSORLG00000022186) #30	AP3B1 (ENSORLG00000002365) #31	scamp1 (ENSORLG00000002381) #33	lhfpl2a (ENSORLG00000002386) #34	ARSB (ENSORLG00000002398) #36	ENSORLG00000025896	DMGDH (ENSORLG00000002405) #37	bhmt (ENSORLG00000002431)
Chinese medaka	MODERN SPECIES	753	DTWD2 (ENSOSIG00000017832)	HOMER1 (ENSOSIG00000017839)	JMY (ENSOSIG00000017853)	bhmt (ENSOSIG00000017866)	DMGDH (ENSOSIG00000017872) #37	ARSB (ENSOSIG00000017895) #36	lhfpl2a (ENSOSIG00000017898) #34	scamp1 (ENSOSIG00000017901) #33	AP3B1 (ENSOSIG00000017913) #31	tbca (ENSOSIG00000017957) #30	otpa (ENSOSIG00000017960) #29	crhbp (ENSOSIG00000017963) #24	SV2C (ENSOSIG00000017982) #18	F2RL2 (ENSOSIG00000018032) #19	f2r2.1 (ENSOSIG00000018033) #21	f2rl1.1 (ENSOSIG00000018034) #22	f2rl1.2 (ENSOSIG00000018038) #22	ch25hl2 (ENSOSIG00000018039)	s100z (ENSOSIG00000018041) #23
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
NAME_4	ANCESTRAL SPECIES		ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Mummichog	MODERN SPECIES	2267	cops4 (ENSFHEG00000006500)	plac8.1 (ENSFHEG00000006414)	ADAMTS6 (ENSFHEG00000006381)	cwc27 (ENSFHEG00000006320)	ppwd1 (ENSFHEG00000006293)	trim23 (ENSFHEG00000000170)	mzt2b (ENSFHEG00000006201)	lhx5 (ENSFHEG00000006182)	ENSFHEG00000006150	GCNT4 (ENSFHEG00000006132) #10	hmgcrb (ENSFHEG00000006120) #12	CERT1 (ENSFHEG00000006058) #13	SV2C (ENSFHEG00000005978) #18	F2RL2 (ENSFHEG00000005955) #19	f2r2.1 (ENSFHEG00000000158) #21	f2rl1.1 (ENSFHEG00000005947) #22	f2rl1.2 (ENSFHEG00000005941) #22	ch25hl2 (ENSFHEG00000005932)	s100z (ENSFHEG00000005920) #23	crhbp (ENSFHEG00000005908) #24	PDE8B (ENSFHEG00000005895) #27	wdr41 (ENSFHEG00000005844) #28	otpa (ENSFHEG00000000677) #29	tbca (ENSFHEG00000005810) #30
Sheepshead minnow	MODERN SPECIES	404									lhx5 (ENSCVAG00000013138)	GCNT4 (ENSCVAG00000013140) #10	hmgcrb (ENSCVAG00000013227) #12	CERT1 (ENSCVAG00000013343) #13	SV2C (ENSCVAG00000013393) #18	F2RL2 (ENSCVAG00000013402) #19	f2r2.1 (ENSCVAG00000013411) #21	f2rl1.1 (ENSCVAG00000013419) #22	f2rl1.2 (ENSCVAG00000013422) #22	ch25hl2 (ENSCVAG00000013436)	s100z (ENSCVAG00000013443) #23	ENSCVAG00000013475	ENSCVAG00000000344	itgb1b (ENSCVAG00000013623)	NRP1 (ENSCVAG00000013684)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000159777	ENSGT00940000155567	ENSGT00390000012762	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00940000168653.b	ENSGT00390000015280	ENSGT00940000159721.h.a #10	ENSGT00940000155305.b.b.c #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Sailfin molly	MODERN SPECIES	502													SV2C (ENSPLAG00000011754) #18	F2RL2 (ENSPLAG00000011769) #19	f2r2.1 (ENSPLAG00000011774) #21	f2rl1.1 (ENSPLAG00000011776) #22	f2rl1.2 (ENSPLAG00000011780) #22	ch25hl2 (ENSPLAG00000011801)	s100z (ENSPLAG00000011835) #23	crhbp (ENSPLAG00000011943) #24	PDE8B (ENSPLAG00000012008) #27	wdr41 (ENSPLAG00000012032) #28	otpa (ENSPLAG00000012052) #29	tbca (ENSPLAG00000012073) #30	AP3B1 (ENSPLAG00000012095) #31	scamp1 (ENSPLAG00000012134) #33	lhfpl2a (ENSPLAG00000012161) #34	ARSB (ENSPLAG00000012289) #36
Amazon molly	MODERN SPECIES	280	ENSPFOG00000023269	ENSPFOG00000010387	arid6 (ENSPFOG00000022560)	ENSPFOG00000023715	unc5da (ENSPFOG00000009678)	tnfrsfa (ENSPFOG00000009564)	ENSPFOG00000022291	trappc13 (ENSPFOG00000009469)	ENSPFOG00000024112	GCNT4 (ENSPFOG00000020252) #10	hmgcrb (ENSPFOG00000009328) #12	CERT1 (ENSPFOG00000009132) #13	SV2C (ENSPFOG00000009066) #18	F2RL2 (ENSPFOG00000009061) #19	f2r2.1 (ENSPFOG00000009051) #21	f2rl1.1 (ENSPFOG00000020251) #22	f2rl1.2 (ENSPFOG00000020250) #22	ch25hl2 (ENSPFOG00000020249)	s100z (ENSPFOG00000009037) #23	crhbp (ENSPFOG00000008990) #24	PDE8B (ENSPFOG00000008456) #27	PDE8B (ENSPFOG00000022318) #27	wdr41 (ENSPFOG00000008295) #28	ENSPFOG00000008261	tbca (ENSPFOG00000008215) #30	AP3B1 (ENSPFOG00000008022) #31	scamp1 (ENSPFOG00000007907) #33	lhfpl2a (ENSPFOG00000007888) #34	ARSB (ENSPFOG00000007724) #36	DMGDH (ENSPFOG00000007360) #37	bhmt (ENSPFOG00000007257)
Guppy	MODERN SPECIES	442	cops4 (ENSPREG00000018229)	plac8.1 (ENSPREG00000018260)	ADAMTS6 (ENSPREG00000018308)	ENSPREG00000018347	cwc27 (ENSPREG00000018364)	ppwd1 (ENSPREG00000018430)	trim23 (ENSPREG00000018458)	mzt2b (ENSPREG00000018479)	lhx5 (ENSPREG00000018491)	GCNT4 (ENSPREG00000018502) #10	hmgcrb (ENSPREG00000018525) #12	CERT1 (ENSPREG00000018596) #13	SV2C (ENSPREG00000018654) #18	F2RL2 (ENSPREG00000018676) #19	f2r2.1 (ENSPREG00000018683) #21	f2rl1.1 (ENSPREG00000018692) #22	f2rl1.2 (ENSPREG00000018699) #22	ENSPREG00000018708	ch25hl2 (ENSPREG00000018722)	s100z (ENSPREG00000018742) #23	crhbp (ENSPREG00000018766) #24	PDE8B (ENSPREG00000018782) #27	wdr41 (ENSPREG00000018815) #28	otpa (ENSPREG00000018848) #29	ENSPREG00000018858	AP3B1 (ENSPREG00000018892) #31	scamp1 (ENSPREG00000018981) #33	lhfpl2a (ENSPREG00000019023) #34	ARSB (ENSPREG00000019046) #36	DMGDH (ENSPREG00000019090) #37	bhmt (ENSPREG00000019126)
Platyfish	MODERN SPECIES	22	plac8.1 (ENSXMAG00000021018)	ADAMTS6 (ENSXMAG00000019046)	ENSXMAG00000028220	cwc27 (ENSXMAG00000019028)	ppwd1 (ENSXMAG00000019013)	trim23 (ENSXMAG00000019005)	mzt2b (ENSXMAG00000019000)	lhx5 (ENSXMAG00000025364)	GCNT4 (ENSXMAG00000023542) #10	ENSXMAG00000029435	hmgcrb (ENSXMAG00000018982) #12	CERT1 (ENSXMAG00000018963) #13	SV2C (ENSXMAG00000018926) #18	F2RL2 (ENSXMAG00000018925) #19	f2r2.1 (ENSXMAG00000018922) #21	f2rl1.1 (ENSXMAG00000018920) #22	f2rl1.2 (ENSXMAG00000022315) #22	ch25hl2 (ENSXMAG00000019422)	s100z (ENSXMAG00000018916) #23	crhbp (ENSXMAG00000018907) #24	PDE8B (ENSXMAG00000018842) #27	wdr41 (ENSXMAG00000018834) #28	otpa (ENSXMAG00000029861) #29	tbca (ENSXMAG00000024381) #30	AP3B1 (ENSXMAG00000018805) #31	scamp1 (ENSXMAG00000028164) #33	lhfpl2a (ENSXMAG00000018753) #34	ARSB (ENSXMAG00000018745) #36	DMGDH (ENSXMAG00000018724) #37	bhmt (ENSXMAG00000024462)	JMY (ENSXMAG00000018710)
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Turquoise killifish	MODERN SPECIES	1611	cops4 (ENSNFUG00015008730)	plac8.1 (ENSNFUG00015008759)	ENSNFUG00015008765	ADAMTS6 (ENSNFUG00015008782)	cwc27 (ENSNFUG00015008838)	ppwd1 (ENSNFUG00015008872)	trim23 (ENSNFUG00015009218)	mzt2b (ENSNFUG00015009462)	lhx5 (ENSNFUG00015009471)	GCNT4 (ENSNFUG00015009486) #10	HMGCRB (ENSNFUG00015009514) #12	COL4A3BP (ENSNFUG00015009754) #13	SV2C (ENSNFUG00015010761) #18	F2RL2 (ENSNFUG00015010814) #19	Nfu_g_1_006533 (ENSNFUG00015010823) #21	f2rl1.1 (ENSNFUG00015010828) #22	F2RL1.2 (ENSNFUG00015010834) #22	ch25hl2 (ENSNFUG00015010842)	S100Z (ENSNFUG00015010858) #23	CRHBP (ENSNFUG00015003890) #24	PDE8B (ENSNFUG00015003954) #27	WDR41 (ENSNFUG00015004234) #28	OTPB (ENSNFUG00015004263) #29	tbca (ENSNFUG00015004274) #30	AP3B1 (ENSNFUG00015004371) #31	Nfu_g_1_006313 (ENSNFUG00015004582) #33	LHFPL2A (ENSNFUG00015004591) #34	ARSB (ENSNFUG00015004599) #36	DMGDH (ENSNFUG00015004648) #37	bhmt (ENSNFUG00015005047)	JMY (ENSNFUG00015005078)
Mangrove rivulus	MODERN SPECIES	149		ADAMTS6 (ENSKMAG00000011498)	cwc27 (ENSKMAG00000011570)	ppwd1 (ENSKMAG00000011602)	trim23 (ENSKMAG00000011663)	mzt2b (ENSKMAG00000011725)	ENSKMAG00000011767	lhx5 (ENSKMAG00000011869)	GCNT4 (ENSKMAG00000011886) #10	hmgcrb (ENSKMAG00000011914) #12	CERT1 (ENSKMAG00000012022) #13	SV2C (ENSKMAG00000012134) #18	ENSKMAG00000012156	F2RL2 (ENSKMAG00000012168) #19	f2r2.1 (ENSKMAG00000012181) #21	f2rl1.1 (ENSKMAG00000012189) #22	f2rl1.2 (ENSKMAG00000012201) #22	ch25hl2 (ENSKMAG00000012213)	s100z (ENSKMAG00000012227) #23	crhbp (ENSKMAG00000012248) #24
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Climbing perch	MODERN SPECIES	3	COPS4 (ENSATEG00000007411)	plac8.1 (ENSATEG00000026599)	ENSATEG00000007479	ENSATEG00000007557	ENSATEG00000007567	ENSATEG00000007627	mzt2b (ENSATEG00000007666)	ENSATEG00000007676	GCNT4 (ENSATEG00000007693) #10	GCNT4 (ENSATEG00000007703) #10	ENSATEG00000007723 #12	CERT1 (ENSATEG00000007810) #13	SV2C (ENSATEG00000007944) #18	F2RL2 (ENSATEG00000007994) #19	f2r2.1 (ENSATEG00000029426) #21	f2rl1.1 (ENSATEG00000026082) #22	f2rl1.2 (ENSATEG00000008020) #22	ch25hl2 (ENSATEG00000008028)	s100z (ENSATEG00000008043) #23	crhbp (ENSATEG00000008060) #24	PDE8B (ENSATEG00000008314) #27	wdr41 (ENSATEG00000008464) #28	otpa (ENSATEG00000008473) #29	tbca (ENSATEG00000008490) #30	AP3B1 (ENSATEG00000008505) #31	SCAMP1 (ENSATEG00000008541) #33	LHFPL2 (ENSATEG00000008588) #34	ARSB (ENSATEG00000008598) #36	DMGDH (ENSATEG00000008607) #37	bhmt (ENSATEG00000008673)	JMY (ENSATEG00000008706)
Siamese fighting fish	MODERN SPECIES	3	trim23 (ENSBSLG00000009671)	mzt2b (ENSBSLG00000009665)	lhx5 (ENSBSLG00000009656)	GCNT4 (ENSBSLG00000009653) #10	GCNT4 (ENSBSLG00000009651) #10	GCNT4 (ENSBSLG00000009647) #10	GCNT4 (ENSBSLG00000009643) #10	ENSBSLG00000009637 #10	GCNT4 (ENSBSLG00000009603) #10	GCNT4 (ENSBSLG00000009600) #10	GCNT4 (ENSBSLG00000009596) #10	hmgcrb (ENSBSLG00000009538) #12	CERT1 (ENSBSLG00000008877) #13	SV2C (ENSBSLG00000008749) #18	f2r2.1 (ENSBSLG00000008727) #21	f2rl1.1 (ENSBSLG00000008723) #22	f2rl1.2 (ENSBSLG00000008716) #22	ch25hl2 (ENSBSLG00000008714)	s100z (ENSBSLG00000008710) #23	crhbp (ENSBSLG00000008673) #24	PDE8B (ENSBSLG00000007946) #27	wdr41 (ENSBSLG00000007776) #28	otpa (ENSBSLG00000007751) #29	tbca (ENSBSLG00000007725) #30	AP3B1 (ENSBSLG00000006839) #31	scamp1 (ENSBSLG00000006367) #33	lhfpl2a (ENSBSLG00000005975) #34	DMGDH (ENSBSLG00000005714) #37	bhmt (ENSBSLG00000005481)	JMY (ENSBSLG00000005382)	ENSBSLG00000005349
Zig-zag eel	MODERN SPECIES	3	lin54 (ENSMAMG00000004854)	COPS4 (ENSMAMG00000004815)	plac8.1 (ENSMAMG00000004799)	ENSMAMG00000004760	ENSMAMG00000004661	ENSMAMG00000004609	ENSMAMG00000004557	mzt2b (ENSMAMG00000004537)	ENSMAMG00000004519	GCNT4 (ENSMAMG00000004514) #10	ENSMAMG00000004461 #12	CERT1 (ENSMAMG00000004370) #13	SV2C (ENSMAMG00000004324) #18	F2RL2 (ENSMAMG00000004316) #19	f2r2.1 (ENSMAMG00000027882) #21	f2rl1.1 (ENSMAMG00000004308) #22	f2rl1.2 (ENSMAMG00000004294) #22	ch25hl2 (ENSMAMG00000004284)	s100z (ENSMAMG00000004265) #23	crhbp (ENSMAMG00000004254) #24	PDE8B (ENSMAMG00000004204) #27	wdr41 (ENSMAMG00000004169) #28	otpa (ENSMAMG00000004156) #29	tbca (ENSMAMG00000004128) #30	AP3B1 (ENSMAMG00000004074) #31	SCAMP1 (ENSMAMG00000004014) #33	LHFPL2 (ENSMAMG00000003982) #34	ARSB (ENSMAMG00000003940) #36	DMGDH (ENSMAMG00000003893) #37	bhmt (ENSMAMG00000003856)	JMY (ENSMAMG00000003843)
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Turbot	MODERN SPECIES	16	lin54 (ENSSMAG00000009869)	COPS4 (ENSSMAG00000009906)	plac8.1 (ENSSMAG00000028205)	ENSSMAG00000009966	ENSSMAG00000010093	ENSSMAG00000010108	ENSSMAG00000010139	mzt2b (ENSSMAG00000010171)	ENSSMAG00000035108	hmgcrb (ENSSMAG00000010211) #12	GCNT4 (ENSSMAG00000010203) #10	ENSSMAG00000010255 #13	SV2C (ENSSMAG00000010339) #18	F2RL2 (ENSSMAG00000024561) #19	f2r2.1 (ENSSMAG00000030722) #21	f2rl1.1 (ENSSMAG00000010383) #22	f2rl1.2 (ENSSMAG00000027655) #22	ch25hl2 (ENSSMAG00000010398)	s100z (ENSSMAG00000024918) #23	crhbp (ENSSMAG00000010424) #24	PDE8B (ENSSMAG00000010435) #27	wdr41 (ENSSMAG00000010452) #28	otpa (ENSSMAG00000026303) #29	tbca (ENSSMAG00000010486) #30	AP3B1 (ENSSMAG00000010503) #31	SCAMP1 (ENSSMAG00000010527) #33	ENSSMAG00000026772	LHFPL2 (ENSSMAG00000010559) #34	ARSB (ENSSMAG00000010569) #36	DMGDH (ENSSMAG00000010584) #37	bhmt (ENSSMAG00000010622)
Tongue sole	MODERN SPECIES	5	lin54 (ENSCSEG00000011040)	cops4 (ENSCSEG00000011083)	plac8.1 (ENSCSEG00000011107)	ADAMTS6 (ENSCSEG00000011127)	cwc27 (ENSCSEG00000011251)	ppwd1 (ENSCSEG00000011265)	trim23 (ENSCSEG00000011286)	mzt2b (ENSCSEG00000011312)	lhx5 (ENSCSEG00000011321)	GCNT4 (ENSCSEG00000011334) #10	hmgcrb (ENSCSEG00000011342) #12	CERT1 (ENSCSEG00000011385) #13	SV2C (ENSCSEG00000011413) #18	F2RL2 (ENSCSEG00000011425) #19	f2r2.1 (ENSCSEG00000011427) #21	f2rl1.1 (ENSCSEG00000011434) #22	f2rl1.2 (ENSCSEG00000011438) #22	ch25hl2 (ENSCSEG00000011443)	s100z (ENSCSEG00000011450) #23	slc27a6 (ENSCSEG00000011454)	ENSCSEG00000011463	SEZ6L (ENSCSEG00000011474)	ENSCSEG00000011496	grk3 (ENSCSEG00000011551)	cryba4 (ENSCSEG00000011585)	crybb1 (ENSCSEG00000011597)	acads (ENSCSEG00000011604)	ENSCSEG00000011625	ENSCSEG00000011631	ENSCSEG00000011639	ENSCSEG00000011660
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Seriola	ANCESTRAL SPECIES	53	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Greater amberjack	MODERN SPECIES	297															f2r2.1 (ENSSDUG00000023504) #21	f2rl1.1 (ENSSDUG00000023505) #22	f2rl1.2 (ENSSDUG00000023507) #22	ch25hl2 (ENSSDUG00000023510)	s100z (ENSSDUG00000023512) #23	crhbp (ENSSDUG00000023513) #24	PDE8B (ENSSDUG00000023518) #27
Yellowtail amberjack	MODERN SPECIES	3042	lin54 (ENSSLDG00000013557)	cops4 (ENSSLDG00000013604)	plac8.1 (ENSSLDG00000013652)	ADAMTS6 (ENSSLDG00000013672)	cwc27 (ENSSLDG00000013750)	ppwd1 (ENSSLDG00000013794)	trim23 (ENSSLDG00000013815)	mzt2b (ENSSLDG00000013865)	lhx5 (ENSSLDG00000013882)	GCNT4 (ENSSLDG00000013894) #10	hmgcrb (ENSSLDG00000013913) #12	CERT1 (ENSSLDG00000013970) #13	SV2C (ENSSLDG00000014039) #18	F2RL2 (ENSSLDG00000014063) #19	f2r2.1 (ENSSLDG00000014072) #21	f2rl1.1 (ENSSLDG00000014079) #22	f2rl1.2 (ENSSLDG00000014088) #22	ch25hl2 (ENSSLDG00000014097)	s100z (ENSSLDG00000014112) #23	crhbp (ENSSLDG00000014122) #24	PDE8B (ENSSLDG00000014147) #27	wdr41 (ENSSLDG00000014187) #28	otpa (ENSSLDG00000014245) #29	tbca (ENSSLDG00000014269) #30	AP3B1 (ENSSLDG00000014297) #31	scamp1 (ENSSLDG00000014368) #33	lhfpl2a (ENSSLDG00000014391) #34	ARSB (ENSSLDG00000014410) #36	DMGDH (ENSSLDG00000014440) #37	bhmt (ENSSLDG00000014491)	JMY (ENSSLDG00000014512)
Barramundi perch	MODERN SPECIES	34		cops4 (ENSLCAG00010004238)	PLAC8 (ENSLCAG00010004226)	ADAMTS6 (ENSLCAG00010004119)	cwc27 (ENSLCAG00010004089)	ppwd1 (ENSLCAG00010004059)	trim23 (ENSLCAG00010004039)	mzt2b (ENSLCAG00010004024)	lhx5 (ENSLCAG00010004021)	GCNT4 (ENSLCAG00010004017) #10	hmgcrb (ENSLCAG00010003972) #12	CERT1 (ENSLCAG00010003603) #13	SV2C (ENSLCAG00010003544) #18	F2RL2 (ENSLCAG00010003542) #19	f2r2.1 (ENSLCAG00010003537) #21	f2rl1.1 (ENSLCAG00010003533) #22	f2rl1.2 (ENSLCAG00010003531) #22	ch25hl2 (ENSLCAG00010003527)	ENSLCAG00010003294	cyb5r3 (ENSLCAG00010003205)	syt1a (ENSLCAG00010003197)	pawr (ENSLCAG00010003184)	ppp1r12a (ENSLCAG00010003115)	rps16 (ENSLCAG00010003081)	myf6 (ENSLCAG00010003076)	myf5 (ENSLCAG00010003070)	lin7a (ENSLCAG00010003066)	ACSS3 (ENSLCAG00010003060)
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Fugu	MODERN SPECIES	18	sec31a (ENSTRUG00000018434)	lin54 (ENSTRUG00000018428)	cops4 (ENSTRUG00000018422)	plac8 (ENSTRUG00000027976)	ADAMTS6 (ENSTRUG00000018410)	cwc27 (ENSTRUG00000018406)	ppwd1 (ENSTRUG00000018397)	trim23 (ENSTRUG00000018393)	mzt2b (ENSTRUG00000020389)	lhx5 (ENSTRUG00000018387)	GCNT4 (ENSTRUG00000018386) #10	hmgcrb (ENSTRUG00000018375) #12	CERT1 (ENSTRUG00000018369) #13	F2RL2 (ENSTRUG00000027056) #19	SV2C (ENSTRUG00000018362) #18	f2rl1.1 (ENSTRUG00000018352) #22	f2rl1.2 (ENSTRUG00000025409) #22	ch25hl2 (ENSTRUG00000018350)	s100z (ENSTRUG00000029087) #23	crhbp (ENSTRUG00000018344) #24	PDE8B (ENSTRUG00000018324) #27	wdr41 (ENSTRUG00000018319) #28	otpa (ENSTRUG00000018317) #29	tbca (ENSTRUG00000018312) #30	AP3B1 (ENSTRUG00000018286) #31	scamp1 (ENSTRUG00000018272) #33	lhfpl2a (ENSTRUG00000022518) #34	ENSTRUG00000026160	ARSB (ENSTRUG00000003412) #36	DMGDH (ENSTRUG00000003979) #37	bhmt (ENSTRUG00000004203)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Ballan wrasse	MODERN SPECIES	528												SV2C (ENSLBEG00000027198) #18	F2RL2 (ENSLBEG00000027190) #19	F2R (ENSLBEG00000027145) #21	F2R (ENSLBEG00000027117) #21	f2rl1.1 (ENSLBEG00000027106) #22	f2rl1.2 (ENSLBEG00000027102) #22	ch25hl2 (ENSLBEG00000027095)	s100z (ENSLBEG00000027087) #23	crhbp (ENSLBEG00000027080) #24	PDE8B (ENSLBEG00000027056) #27	wdr41 (ENSLBEG00000027031) #28	otpa (ENSLBEG00000027017) #29	ENSLBEG00000026976	tbca (ENSLBEG00000026946) #30	AP3B1 (ENSLBEG00000026927) #31	ENSLBEG00000026912 #31
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	33	PLAC8 (ENSSLUG00000016285)	ADAMTS6 (ENSSLUG00000016185)	cwc27 (ENSSLUG00000016168)	ppwd1 (ENSSLUG00000016134)	trim23 (ENSSLUG00000015714)	mzt2b (ENSSLUG00000015678)	lhx5 (ENSSLUG00000015671)	GCNT4 (ENSSLUG00000015667) #10	hmgcrb (ENSSLUG00000014926) #12	CERT1 (ENSSLUG00000012625) #13	SV2C (ENSSLUG00000012183) #18	F2RL2 (ENSSLUG00000012168) #19	f2r2.1 (ENSSLUG00000012165) #21	f2rl1.1 (ENSSLUG00000012162) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.2 (ENSSLUG00000012151) #22	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144) #23	crhbp (ENSSLUG00000012137) #24	PDE8B (ENSSLUG00000012130) #27	wdr41 (ENSSLUG00000011958) #28	otpa (ENSSLUG00000011935) #29	tbca (ENSSLUG00000011926) #30	AP3B1 (ENSSLUG00000011801) #31	scamp1 (ENSSLUG00000011766) #33	lhfpl2a (ENSSLUG00000011761) #34	ARSB (ENSSLUG00000011744) #36	DMGDH (ENSSLUG00000011623) #37	bhmt (ENSSLUG00000011582)	JMY (ENSSLUG00000011567)
Pike perch	MODERN SPECIES	33		PLAC8 (ENSSLUG00000016285)	ADAMTS6 (ENSSLUG00000016185)	cwc27 (ENSSLUG00000016168)	ppwd1 (ENSSLUG00000016134)	trim23 (ENSSLUG00000015714)	mzt2b (ENSSLUG00000015678)	lhx5 (ENSSLUG00000015671)	GCNT4 (ENSSLUG00000015667) #10	hmgcrb (ENSSLUG00000014926) #12	CERT1 (ENSSLUG00000012625) #13	SV2C (ENSSLUG00000012183) #18	F2RL2 (ENSSLUG00000012168) #19	f2r2.1 (ENSSLUG00000012165) #21	f2rl1.1 (ENSSLUG00000012162) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.2 (ENSSLUG00000012151) #22	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144) #23	crhbp (ENSSLUG00000012137) #24	PDE8B (ENSSLUG00000012130) #27	wdr41 (ENSSLUG00000011958) #28	otpa (ENSSLUG00000011935) #29	tbca (ENSSLUG00000011926) #30	AP3B1 (ENSSLUG00000011801) #31	scamp1 (ENSSLUG00000011766) #33	lhfpl2a (ENSSLUG00000011761) #34	ARSB (ENSSLUG00000011744) #36	DMGDH (ENSSLUG00000011623) #37	bhmt (ENSSLUG00000011582)
Pike perch	MODERN SPECIES	33			PLAC8 (ENSSLUG00000016285)	ADAMTS6 (ENSSLUG00000016185)	cwc27 (ENSSLUG00000016168)	ppwd1 (ENSSLUG00000016134)	trim23 (ENSSLUG00000015714)	mzt2b (ENSSLUG00000015678)	lhx5 (ENSSLUG00000015671)	GCNT4 (ENSSLUG00000015667) #10	hmgcrb (ENSSLUG00000014926) #12	CERT1 (ENSSLUG00000012625) #13	SV2C (ENSSLUG00000012183) #18	F2RL2 (ENSSLUG00000012168) #19	f2r2.1 (ENSSLUG00000012165) #21	f2rl1.1 (ENSSLUG00000012162) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.2 (ENSSLUG00000012151) #22	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144) #23	crhbp (ENSSLUG00000012137) #24	PDE8B (ENSSLUG00000012130) #27	wdr41 (ENSSLUG00000011958) #28	otpa (ENSSLUG00000011935) #29	tbca (ENSSLUG00000011926) #30	AP3B1 (ENSSLUG00000011801) #31	scamp1 (ENSSLUG00000011766) #33	lhfpl2a (ENSSLUG00000011761) #34	ARSB (ENSSLUG00000011744) #36	DMGDH (ENSSLUG00000011623) #37
Channel bull blenny	MODERN SPECIES	3	lin54 (ENSCGOG00000015485)	cops4 (ENSCGOG00000015563)	plac8.1 (ENSCGOG00000015587)	ADAMTS6 (ENSCGOG00000015595)	cwc27 (ENSCGOG00000015627)	ppwd1 (ENSCGOG00000015933)	trim23 (ENSCGOG00000016037)	mzt2b (ENSCGOG00000016240)	lhx5 (ENSCGOG00000016241)	GCNT4 (ENSCGOG00000016250) #10	hmgcrb (ENSCGOG00000016256) #12	CERT1 (ENSCGOG00000016569) #13	SV2C (ENSCGOG00000017410) #18	ENSCGOG00000017878 #19	f2r2.1 (ENSCGOG00000017879) #21	f2rl1.1 (ENSCGOG00000017880) #22	f2rl1.2 (ENSCGOG00000017882) #22	s100z (ENSCGOG00000017887) #23	crhbp (ENSCGOG00000017890) #24	PDE8B (ENSCGOG00000017917) #27	wdr41 (ENSCGOG00000018568) #28	otpa (ENSCGOG00000018661) #29	tbca (ENSCGOG00000018671) #30	AP3B1 (ENSCGOG00000018679) #31	scamp1 (ENSCGOG00000018847) #33	lhfpl2a (ENSCGOG00000018856) #34	ARSB (ENSCGOG00000018860) #36	DMGDH (ENSCGOG00000018919) #37	bhmt (ENSCGOG00000019370)	JMY (ENSCGOG00000019494)	ENSCGOG00000019503
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Lumpfish	MODERN SPECIES	3	sec31a (ENSCLMG00005018147)	lin54 (ENSCLMG00005018332)	cops4 (ENSCLMG00005018470)	plac8.1 (ENSCLMG00005018495)	ADAMTS6 (ENSCLMG00005018496)	cwc27 (ENSCLMG00005018500)	ppwd1 (ENSCLMG00005018502)	trim23 (ENSCLMG00005018578)	mzt2b (ENSCLMG00005018711)	lhx5 (ENSCLMG00005018712)	GCNT4 (ENSCLMG00005018715) #10	hmgcrb (ENSCLMG00005018721) #12	CERT1 (ENSCLMG00005018833) #13	SV2C (ENSCLMG00005019494) #18	f2r2.1 (ENSCLMG00005019506) #21	f2rl1.1 (ENSCLMG00005019507) #22	f2rl1.2 (ENSCLMG00005019508) #22	ch25hl2 (ENSCLMG00005019509)	s100z (ENSCLMG00005019510) #23	crhbp (ENSCLMG00005004294) #24	PDE8B (ENSCLMG00005004331) #27	wdr41 (ENSCLMG00005004503) #28	otpa (ENSCLMG00005004607) #29	tbca (ENSCLMG00005004813) #30	AP3B1 (ENSCLMG00005004891) #31	scamp1 (ENSCLMG00005010083) #33	lhfpl2a (ENSCLMG00005010085) #34	ARSB (ENSCLMG00005010086) #36	DMGDH (ENSCLMG00005010089) #37	bhmt (ENSCLMG00005010092)	JMY (ENSCLMG00005010111)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Large yellow croaker	MODERN SPECIES	4	ENSLCRG00005007382	CNNM4 (ENSLCRG00005007667)	CNNM3 (ENSLCRG00005007677)	ENSLCRG00005007680	PURB (ENSLCRG00005007682)	ved (ENSLCRG00005007685)	polm (ENSLCRG00005007689)	mzt2b (ENSLCRG00005007793)	lhx5 (ENSLCRG00005007797)	GCNT4 (ENSLCRG00005007802) #10	hmgcrb (ENSLCRG00005007812) #12	CERT1 (ENSLCRG00005008123) #13	SV2C (ENSLCRG00005010695) #18	F2RL2 (ENSLCRG00005010753) #19	f2r2.1 (ENSLCRG00005010755) #21	f2rl1.1 (ENSLCRG00005010756) #22	f2rl1.2 (ENSLCRG00005010757) #22	s100z (ENSLCRG00005010758) #23	ch25hl2 (ENSLCRG00005010760)	crhbp (ENSLCRG00005010764) #24	PDE8B (ENSLCRG00005010781) #27	wdr41 (ENSLCRG00005010827) #28	otpa (ENSLCRG00005010920) #29	tbca (ENSLCRG00005010923) #30	AP3B1 (ENSLCRG00005010933) #31	scamp1 (ENSLCRG00005011792) #33	lhfpl2a (ENSLCRG00005011798) #34	ARSB (ENSLCRG00005011801) #36	bhmt (ENSLCRG00005011814)	DMGDH (ENSLCRG00005011869) #37	JMY (ENSLCRG00005013114)
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30	ENSSAUG00010009054	AP3B1 (ENSSAUG00010009064) #31	scamp1 (ENSSAUG00010009142) #33	lhfpl2a (ENSSAUG00010009145) #34
Pinecone sodierfish	MODERN SPECIES	3	cops4 (ENSMMDG00005003373)	ENSMMDG00005003389	plac8.1 (ENSMMDG00005003391)	ADAMTS6 (ENSMMDG00005003397)	cwc27 (ENSMMDG00005003407)	ppwd1 (ENSMMDG00005003414)	trim23 (ENSMMDG00005003417)	mzt2b (ENSMMDG00005004523)	lhx5 (ENSMMDG00005004528)	GCNT4 (ENSMMDG00005004536) #10	hmgcrb (ENSMMDG00005004551) #12	CERT1 (ENSMMDG00005004619) #13	SV2C (ENSMMDG00005004990) #18	F2RL2 (ENSMMDG00005005395) #19	f2r2.1 (ENSMMDG00005005400) #21	f2rl1.1 (ENSMMDG00005005405) #22	f2rl1.2 (ENSMMDG00005005408) #22	ch25hl2 (ENSMMDG00005005410)	s100z (ENSMMDG00005005417) #23	crhbp (ENSMMDG00005005426) #24	PDE8B (ENSMMDG00005005550) #27	wdr41 (ENSMMDG00005005908) #28	otpa (ENSMMDG00005005938) #29	tbca (ENSMMDG00005005944) #30	AP3B1 (ENSMMDG00005005969) #31	scamp1 (ENSMMDG00005006270) #33	lhfpl2a (ENSMMDG00005006275) #34	ARSB (ENSMMDG00005006283) #36	DMGDH (ENSMMDG00005006293) #37	bhmt (ENSMMDG00005006373)	bhmt (ENSMMDG00005006407)
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES	17	ENSGMOG00000011766	ABL1 (ENSGMOG00000011771)	exosc2 (ENSGMOG00000011785)	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36	DMGDH (ENSGMOG00000008408) #37	bhmt (ENSGMOG00000008411)
Cod	MODERN SPECIES	17	ABL1 (ENSGMOG00000011771)	exosc2 (ENSGMOG00000011785)	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36	DMGDH (ENSGMOG00000008408) #37	bhmt (ENSGMOG00000008411)	JMY (ENSGMOG00000034971)
Cod	MODERN SPECIES	17	exosc2 (ENSGMOG00000011785)	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36	DMGDH (ENSGMOG00000008408) #37	bhmt (ENSGMOG00000008411)	JMY (ENSGMOG00000034971)	HOMER1 (ENSGMOG00000008419)
Cod	MODERN SPECIES	17	ddx54 (ENSGMOG00000011746)	ENSGMOG00000011766	ABL1 (ENSGMOG00000011771)	exosc2 (ENSGMOG00000011785)	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36	DMGDH (ENSGMOG00000008408) #37
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00940000159243	ENSGT00990000205556	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	573			ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37	ENSGT00390000003122.a.a.a.e
Salmo	ANCESTRAL SPECIES	1	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.b #30	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37
River trout	MODERN SPECIES	3	ENSSTUG00000013179	ENSSTUG00000013159	pisd (ENSSTUG00000013140)	ENSSTUG00000013135	rnf224 (ENSSTUG00000013121)	prpf4 (ENSSTUG00000012837)	cdc26 (ENSSTUG00000012816)	slc31a1 (ENSSTUG00000012802)	atp6v1g1 (ENSSTUG00000012790)	CERT1 (ENSSTUG00000010713) #13	ENSSTUG00000010643	ENSSTUG00000010636	SV2C (ENSSTUG00000010522) #18	F2RL2 (ENSSTUG00000010510) #19	F2R (ENSSTUG00000010507) #21	f2rl1.1 (ENSSTUG00000010502) #22	f2rl1.2 (ENSSTUG00000010495) #22	ch25hl2 (ENSSTUG00000010489)	s100z (ENSSTUG00000010478) #23	crhbp (ENSSTUG00000010464) #24	aggf1 (ENSSTUG00000010412) #25	PDE8B (ENSSTUG00000010269) #27	ENSSTUG00000010259	otpa (ENSSTUG00000010242) #29	tbca (ENSSTUG00000010231) #30	AP3B1 (ENSSTUG00000007196) #31	ENSSTUG00000007106	scamp1 (ENSSTUG00000007065) #33	lhfpl2a (ENSSTUG00000007040) #34	ARSB (ENSSTUG00000007026) #36	bhmt (ENSSTUG00000006978)
Huchen	MODERN SPECIES	1611	ENSHHUG00000041509	pisd (ENSHHUG00000041519)	rnf224 (ENSHHUG00000041534)	prpf4 (ENSHHUG00000041542)	cdc26 (ENSHHUG00000041614)	slc31a1 (ENSHHUG00000041620)	atp6v1g1 (ENSHHUG00000041631)	ENSHHUG00000041646 ##13	CERT1 (ENSHHUG00000041649) #13	ENSHHUG00000041658 #13	ENSHHUG00000041664	ENSHHUG00000041670	SV2C (ENSHHUG00000041673) #18	F2RL2 (ENSHHUG00000041712) #19	F2R (ENSHHUG00000041713) #21	f2rl1.1 (ENSHHUG00000041720) #22	f2rl1.2 (ENSHHUG00000041732) #22	ch25hl2 (ENSHHUG00000041737)	s100z (ENSHHUG00000041742) #23
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f
Huchen	MODERN SPECIES	356													ENSHHUG00000004886	F2RL2 (ENSHHUG00000004882) #19	F2R (ENSHHUG00000004876) #21	f2rl1.1 (ENSHHUG00000004874) #22	f2rl1.1 (ENSHHUG00000004873) #22	f2rl1.2 (ENSHHUG00000004795) #22	ch25hl2 (ENSHHUG00000004780)	s100z (ENSHHUG00000004773) #23	crhbp (ENSHHUG00000004761) #24	aggf1 (ENSHHUG00000004753) #25	PDE8B (ENSHHUG00000004183) #27	wdr41 (ENSHHUG00000004143) #28	otpa (ENSHHUG00000004114) #29	tbca (ENSHHUG00000004085) #30	AP3B1 (ENSHHUG00000003988) #31	scamp1 (ENSHHUG00000003948) #33	lhfpl2a (ENSHHUG00000003940) #34	bhmt (ENSHHUG00000003824)	DMGDH (ENSHHUG00000003757) #37
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.gb #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005001978	pisd (ENSOTSG00005001974)	ENSOTSG00005001972	rnf224 (ENSOTSG00005001971)	ENSOTSG00005001969	prpf4 (ENSOTSG00005001967)	cdc26 (ENSOTSG00005001966)	slc31a1 (ENSOTSG00005001964)	atp6v1g1 (ENSOTSG00005001785)	hmgcrb (ENSOTSG00005036211) #12	CERT1 (ENSOTSG00005035862) #13	ENSOTSG00005035858	SV2C (ENSOTSG00005035394) #18	F2RL2 (ENSOTSG00005035390) #19	F2R (ENSOTSG00005035389) #21	f2rl1.1 (ENSOTSG00005035388) #22	f2rl1.1 (ENSOTSG00005035387) #22	f2rl1.2 (ENSOTSG00005035386) #22	ch25hl2 (ENSOTSG00005035385)	s100z (ENSOTSG00005035384) #23	crhbp (ENSOTSG00005035382) #24	aggf1 (ENSOTSG00005035381) #25	PDE8B (ENSOTSG00005035380) #27	wdr41 (ENSOTSG00005035379) #28	otpa (ENSOTSG00005035378) #29	tbca (ENSOTSG00005035356) #30	ENSOTSG00005035353	DMGDH (ENSOTSG00005033116) #37	bhmt (ENSOTSG00005032687)	JMY (ENSOTSG00005032667)	HOMER1 (ENSOTSG00005032662)
Coho salmon	MODERN SPECIES	15	ENSOKIG00005017859	pisd (ENSOKIG00005017869)	ENSOKIG00005017904	rnf224 (ENSOKIG00005017908)	ENSOKIG00005017918	slc31a1 (ENSOKIG00005017953)	cdc26 (ENSOKIG00005017973)	atp6v1g1 (ENSOKIG00005017977)	hmgcrb (ENSOKIG00005018005) #12	CERT1 (ENSOKIG00005018187) #13	ENSOKIG00005018354	SV2C (ENSOKIG00005018365) #18	ENSOKIG00005018429	F2RL2 (ENSOKIG00005018438) #19	F2R (ENSOKIG00005018463) #21	f2rl1.1 (ENSOKIG00005018471) #22	f2rl1.1 (ENSOKIG00005018474) #22	f2rl1.2 (ENSOKIG00005018486) #22	ch25hl2 (ENSOKIG00005018528)	s100z (ENSOKIG00005018551) #23	crhbp (ENSOKIG00005018561) #24	aggf1 (ENSOKIG00005018578) #25	PDE8B (ENSOKIG00005018615) #27	wdr41 (ENSOKIG00005018890) #28	otpa (ENSOKIG00005018943) #29	tbca (ENSOKIG00005018976) #30	AP3B1 (ENSOKIG00005019349) #31	SCAMP1 (ENSOKIG00005026634) #33	lhfpl2a (ENSOKIG00005026687) #34	ENSOKIG00005026697	DMGDH (ENSOKIG00005026761) #37
Rainbow trout	MODERN SPECIES	26	rnf224 (ENSOMYG00000008166)	ENSOMYG00000054172	ENSOMYG00000008128	cdc26 (ENSOMYG00000008014)	slc31a1 (ENSOMYG00000007997)	vatg1 (ENSOMYG00000007947)	hmgcrb (ENSOMYG00000006390) #12	ENSOMYG00000061878	ENSOMYG00000004355 #13	ENSOMYG00000003693	ENSOMYG00000067030	ENSOMYG00000049365	SV2C (ENSOMYG00000003632) #18	ENSOMYG00000054402	F2R (ENSOMYG00000068290) #21	f2rl1.1 (ENSOMYG00000076572) #22	f2rl1.1 (ENSOMYG00000003516) #22	ch25hl2 (ENSOMYG00000003453)	s100z (ENSOMYG00000003438) #23	crhbp (ENSOMYG00000003389) #24	aggf1 (ENSOMYG00000003353) #25	PDE8B (ENSOMYG00000003268) #27	wdr41 (ENSOMYG00000003184) #28	otpa (ENSOMYG00000003096) #29	tbca (ENSOMYG00000032310) #30	ENSOMYG00000070555	AP3B1 (ENSOMYG00000002708) #31	SCAMP1 (ENSOMYG00000001807) #33	ENSOMYG00000074845	LHFPL2 (ENSOMYG00000001799) #34	ENSOMYG00000001788
Salmo	ANCESTRAL SPECIES		ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00940000170540	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT01100000263538.A.a.a.b.b.m	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f
Atlantic salmon	MODERN SPECIES		ENSSSAG00000112208	ENSSSAG00000077592	ENSSSAG00000077599	ENSSSAG00000077607	ENSSSAG00000077616	rnf224 (ENSSSAG00000077619)	prpf4 (ENSSSAG00000104108)	cdc26 (ENSSSAG00000095124)	slc31a1 (ENSSSAG00000077631)	hmdh (ENSSSAG00000077677) #12	ENSSSAG00000082186	ENSSSAG00000078315 #13	ENSSSAG00000078409	F2RL2 (ENSSSAG00000098455) #19	F2R (ENSSSAG00000077489) #21	f2rl1.1 (ENSSSAG00000078421) #22	f2rl1.1 (ENSSSAG00000078417) #22	f2rl1.1 (ENSSSAG00000084722) #22	ch25hl2 (ENSSSAG00000078425)	s100z (ENSSSAG00000120666) #23	crhbp (ENSSSAG00000078436) #24	aggf1 (ENSSSAG00000078440) #25	PDE8B (ENSSSAG00000077426) #27	wdr41 (ENSSSAG00000078906) #28	otp (ENSSSAG00000078916) #29	tbca (ENSSSAG00000078918)	ap3b1 (ENSSSAG00000078995) #31	scamp1 (ENSSSAG00000080106) #33	LHFPL2 (ENSSSAG00000115220) #34	ENSSSAG00000108005	DMGDH (ENSSSAG00000080134) #37
River trout	MODERN SPECIES	15	pisd (ENSSTUG00000050513)	ENSSTUG00000050519	ENSSTUG00000050521	rnf224 (ENSSTUG00000050523)	ENSSTUG00000050526	cdc26 (ENSSTUG00000050527)	slc31a1 (ENSSTUG00000050530)	atp6v1g1 (ENSSTUG00000050531)	hmgcrb (ENSSTUG00000035385) #12	CERT1 (ENSSTUG00000036109) #13	ENSSTUG00000038095	SV2C (ENSSTUG00000038115) #18	ENSSTUG00000038453	F2RL2 (ENSSTUG00000038460) #19	F2R (ENSSTUG00000038465) #21	f2rl1.1 (ENSSTUG00000038471) #22	f2rl1.1 (ENSSTUG00000038485) #22	ch25hl2 (ENSSTUG00000038497)	s100z (ENSSTUG00000038505) #23	crhbp (ENSSTUG00000038512) #24	aggf1 (ENSSTUG00000038521) #25	AP3B1 (ENSSTUG00000038574) #31	scamp1 (ENSSTUG00000039388) #33	lhfpl2a (ENSSTUG00000039418) #34	ENSSTUG00000039420	DMGDH (ENSSTUG00000039448) #37	bhmt (ENSSTUG00000040918)	JMY (ENSSTUG00000041093)	HOMER1 (ENSSTUG00000041264)	DTWD2 (ENSSTUG00000041448)	tia1 (ENSSTUG00000041520)
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h
Salmo	ANCESTRAL SPECIES		ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00940000170540	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT01100000263538.A.a.a.b.b.m	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES		ENSSSAG00000077592	ENSSSAG00000077599	ENSSSAG00000077607	ENSSSAG00000077616	rnf224 (ENSSSAG00000077619)	prpf4 (ENSSSAG00000104108)	cdc26 (ENSSSAG00000095124)	slc31a1 (ENSSSAG00000077631)	hmdh (ENSSSAG00000077677) #12	ENSSSAG00000082186	ENSSSAG00000078315 #13	ENSSSAG00000078409	F2RL2 (ENSSSAG00000098455) #19	F2R (ENSSSAG00000077489) #21	f2rl1.1 (ENSSSAG00000078421) #22	f2rl1.1 (ENSSSAG00000078417) #22	f2rl1.1 (ENSSSAG00000084722) #22	ch25hl2 (ENSSSAG00000078425)	s100z (ENSSSAG00000120666) #23	crhbp (ENSSSAG00000078436) #24	aggf1 (ENSSSAG00000078440) #25	PDE8B (ENSSSAG00000077426) #27	wdr41 (ENSSSAG00000078906) #28	otp (ENSSSAG00000078916) #29	tbca (ENSSSAG00000078918)	ap3b1 (ENSSSAG00000078995) #31	scamp1 (ENSSSAG00000080106) #33	LHFPL2 (ENSSSAG00000115220) #34	ENSSSAG00000108005	DMGDH (ENSSSAG00000080134) #37	bhmt (ENSSSAG00000080258)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000077599	ENSSSAG00000077607	ENSSSAG00000077616	rnf224 (ENSSSAG00000077619)	prpf4 (ENSSSAG00000104108)	cdc26 (ENSSSAG00000095124)	slc31a1 (ENSSSAG00000077631)	hmdh (ENSSSAG00000077677) #12	ENSSSAG00000082186	ENSSSAG00000078315 #13	ENSSSAG00000078409	F2RL2 (ENSSSAG00000098455) #19	F2R (ENSSSAG00000077489) #21	f2rl1.1 (ENSSSAG00000078421) #22	f2rl1.1 (ENSSSAG00000078417) #22	f2rl1.1 (ENSSSAG00000084722) #22	ch25hl2 (ENSSSAG00000078425)	s100z (ENSSSAG00000120666) #23	crhbp (ENSSSAG00000078436) #24	aggf1 (ENSSSAG00000078440) #25	PDE8B (ENSSSAG00000077426) #27	wdr41 (ENSSSAG00000078906) #28	otp (ENSSSAG00000078916) #29	tbca (ENSSSAG00000078918)	ap3b1 (ENSSSAG00000078995) #31	scamp1 (ENSSSAG00000080106) #33	LHFPL2 (ENSSSAG00000115220) #34	ENSSSAG00000108005	DMGDH (ENSSSAG00000080134) #37	bhmt (ENSSSAG00000080258)	JMY (ENSSSAG00000080283)
River trout	MODERN SPECIES	15	ENSSTUG00000050519	ENSSTUG00000050521	rnf224 (ENSSTUG00000050523)	ENSSTUG00000050526	cdc26 (ENSSTUG00000050527)	slc31a1 (ENSSTUG00000050530)	atp6v1g1 (ENSSTUG00000050531)	hmgcrb (ENSSTUG00000035385) #12	CERT1 (ENSSTUG00000036109) #13	ENSSTUG00000038095	SV2C (ENSSTUG00000038115) #18	ENSSTUG00000038453	F2RL2 (ENSSTUG00000038460) #19	F2R (ENSSTUG00000038465) #21	f2rl1.1 (ENSSTUG00000038471) #22	f2rl1.1 (ENSSTUG00000038485) #22	ch25hl2 (ENSSTUG00000038497)	s100z (ENSSTUG00000038505) #23	crhbp (ENSSTUG00000038512) #24	aggf1 (ENSSTUG00000038521) #25	AP3B1 (ENSSTUG00000038574) #31	scamp1 (ENSSTUG00000039388) #33	lhfpl2a (ENSSTUG00000039418) #34	ENSSTUG00000039420	DMGDH (ENSSTUG00000039448) #37	bhmt (ENSSTUG00000040918)	JMY (ENSSTUG00000041093)	HOMER1 (ENSSTUG00000041264)	DTWD2 (ENSSTUG00000041448)	tia1 (ENSSTUG00000041520)	C2orf42 (ENSSTUG00000042757)
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.gb #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h
Chinook salmon	MODERN SPECIES	12	pisd (ENSOTSG00005001974)	ENSOTSG00005001972	rnf224 (ENSOTSG00005001971)	ENSOTSG00005001969	prpf4 (ENSOTSG00005001967)	cdc26 (ENSOTSG00005001966)	slc31a1 (ENSOTSG00005001964)	atp6v1g1 (ENSOTSG00005001785)	hmgcrb (ENSOTSG00005036211) #12	CERT1 (ENSOTSG00005035862) #13	ENSOTSG00005035858	SV2C (ENSOTSG00005035394) #18	F2RL2 (ENSOTSG00005035390) #19	F2R (ENSOTSG00005035389) #21	f2rl1.1 (ENSOTSG00005035388) #22	f2rl1.1 (ENSOTSG00005035387) #22	f2rl1.2 (ENSOTSG00005035386) #22	ch25hl2 (ENSOTSG00005035385)	s100z (ENSOTSG00005035384) #23	crhbp (ENSOTSG00005035382) #24	aggf1 (ENSOTSG00005035381) #25	PDE8B (ENSOTSG00005035380) #27	wdr41 (ENSOTSG00005035379) #28	otpa (ENSOTSG00005035378) #29	tbca (ENSOTSG00005035356) #30	ENSOTSG00005035353	DMGDH (ENSOTSG00005033116) #37	bhmt (ENSOTSG00005032687)	JMY (ENSOTSG00005032667)	HOMER1 (ENSOTSG00005032662)	DTWD2 (ENSOTSG00005032660)
Coho salmon	MODERN SPECIES	15	pisd (ENSOKIG00005017869)	ENSOKIG00005017904	rnf224 (ENSOKIG00005017908)	ENSOKIG00005017918	slc31a1 (ENSOKIG00005017953)	cdc26 (ENSOKIG00005017973)	atp6v1g1 (ENSOKIG00005017977)	hmgcrb (ENSOKIG00005018005) #12	CERT1 (ENSOKIG00005018187) #13	ENSOKIG00005018354	SV2C (ENSOKIG00005018365) #18	ENSOKIG00005018429	F2RL2 (ENSOKIG00005018438) #19	F2R (ENSOKIG00005018463) #21	f2rl1.1 (ENSOKIG00005018471) #22	f2rl1.1 (ENSOKIG00005018474) #22	f2rl1.2 (ENSOKIG00005018486) #22	ch25hl2 (ENSOKIG00005018528)	s100z (ENSOKIG00005018551) #23	crhbp (ENSOKIG00005018561) #24	aggf1 (ENSOKIG00005018578) #25	PDE8B (ENSOKIG00005018615) #27	wdr41 (ENSOKIG00005018890) #28	otpa (ENSOKIG00005018943) #29	tbca (ENSOKIG00005018976) #30	AP3B1 (ENSOKIG00005019349) #31	SCAMP1 (ENSOKIG00005026634) #33	lhfpl2a (ENSOKIG00005026687) #34	ENSOKIG00005026697	DMGDH (ENSOKIG00005026761) #37	bhmt (ENSOKIG00005027395)
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000054172	ENSOMYG00000008128	cdc26 (ENSOMYG00000008014)	slc31a1 (ENSOMYG00000007997)	vatg1 (ENSOMYG00000007947)	hmgcrb (ENSOMYG00000006390) #12	ENSOMYG00000061878	ENSOMYG00000004355 #13	ENSOMYG00000003693	ENSOMYG00000067030	ENSOMYG00000049365	SV2C (ENSOMYG00000003632) #18	ENSOMYG00000054402	F2R (ENSOMYG00000068290) #21	f2rl1.1 (ENSOMYG00000076572) #22	f2rl1.1 (ENSOMYG00000003516) #22	ch25hl2 (ENSOMYG00000003453)	s100z (ENSOMYG00000003438) #23	crhbp (ENSOMYG00000003389) #24	aggf1 (ENSOMYG00000003353) #25	PDE8B (ENSOMYG00000003268) #27	wdr41 (ENSOMYG00000003184) #28	otpa (ENSOMYG00000003096) #29	tbca (ENSOMYG00000032310) #30	ENSOMYG00000070555	AP3B1 (ENSOMYG00000002708) #31	SCAMP1 (ENSOMYG00000001807) #33	ENSOMYG00000074845	LHFPL2 (ENSOMYG00000001799) #34	ENSOMYG00000001788	DMGDH (ENSOMYG00000001494) #37
Huchen	MODERN SPECIES	356												ENSHHUG00000004886	F2RL2 (ENSHHUG00000004882) #19	F2R (ENSHHUG00000004876) #21	f2rl1.1 (ENSHHUG00000004874) #22	f2rl1.1 (ENSHHUG00000004873) #22	f2rl1.2 (ENSHHUG00000004795) #22	ch25hl2 (ENSHHUG00000004780)	s100z (ENSHHUG00000004773) #23	crhbp (ENSHHUG00000004761) #24	aggf1 (ENSHHUG00000004753) #25	PDE8B (ENSHHUG00000004183) #27	wdr41 (ENSHHUG00000004143) #28	otpa (ENSHHUG00000004114) #29	tbca (ENSHHUG00000004085) #30	AP3B1 (ENSHHUG00000003988) #31	scamp1 (ENSHHUG00000003948) #33	lhfpl2a (ENSHHUG00000003940) #34	bhmt (ENSHHUG00000003824)	DMGDH (ENSHHUG00000003757) #37	JMY (ENSHHUG00000003684)
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	13	oclna (ENSELUG00000001157)	MARVELD2 (ENSELUG00000001231)	stard4 (ENSELUG00000007604)	ENSELUG00000007577	ENSELUG00000007569	pisd (ENSELUG00000007552)	ENSELUG00000007530	rnf224 (ENSELUG00000007522)	cdc26 (ENSELUG00000007352)	prpf4 (ENSELUG00000007510)	atp6v1g1 (ENSELUG00000034652)	hmgcrb (ENSELUG00000007320) #12	CERT1 (ENSELUG00000007230) #13	SV2C (ENSELUG00000007129) #18	F2RL2 (ENSELUG00000007103) #19	f2rl1.1 (ENSELUG00000007001) #22	f2r2.1 (ENSELUG00000007082) #21	f2rl1.1 (ENSELUG00000006993) #22	f2rl1.2 (ENSELUG00000006989) #22	ch25hl2 (ENSELUG00000006977)	s100z (ENSELUG00000006972) #23	crhbp (ENSELUG00000006962) #24	aggf1 (ENSELUG00000000226) #25	PDE8B (ENSELUG00000006875) #27	wdr41 (ENSELUG00000006803) #28	otpa (ENSELUG00000006749) #29	tbca (ENSELUG00000006728) #30	AP3B1 (ENSELUG00000006692) #31	scamp1 (ENSELUG00000006644) #33	lhfpl2a (ENSELUG00000006588) #34	ARSB (ENSELUG00000006567) #36
Northern pike	MODERN SPECIES	13	stard4 (ENSELUG00000007604)	ENSELUG00000007577	ENSELUG00000007569	pisd (ENSELUG00000007552)	ENSELUG00000007530	rnf224 (ENSELUG00000007522)	cdc26 (ENSELUG00000007352)	prpf4 (ENSELUG00000007510)	atp6v1g1 (ENSELUG00000034652)	hmgcrb (ENSELUG00000007320) #12	CERT1 (ENSELUG00000007230) #13	SV2C (ENSELUG00000007129) #18	F2RL2 (ENSELUG00000007103) #19	f2rl1.1 (ENSELUG00000007001) #22	f2r2.1 (ENSELUG00000007082) #21	f2rl1.1 (ENSELUG00000006993) #22	f2rl1.2 (ENSELUG00000006989) #22	ch25hl2 (ENSELUG00000006977)	s100z (ENSELUG00000006972) #23	crhbp (ENSELUG00000006962) #24	aggf1 (ENSELUG00000000226) #25	PDE8B (ENSELUG00000006875) #27	wdr41 (ENSELUG00000006803) #28	otpa (ENSELUG00000006749) #29	tbca (ENSELUG00000006728) #30	AP3B1 (ENSELUG00000006692) #31	scamp1 (ENSELUG00000006644) #33	lhfpl2a (ENSELUG00000006588) #34	ARSB (ENSELUG00000006567) #36	bhmt (ENSELUG00000006487)	DMGDH (ENSELUG00000006530) #37
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Clupeiformes	ANCESTRAL SPECIES	129	ENSGT00940000155567	ENSGT00390000012762.u	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	13	dab2 (ENSDCDG00000029983)	ENSDCDG00000029969	ENSDCDG00000029964	aqp3b (ENSDCDG00000029961)	unc5da (ENSDCDG00000028972)	tnfrsfa (ENSDCDG00000028939)	zgc:193801 (ENSDCDG00000028935)	mzt2b (ENSDCDG00000028932)	lhx5 (ENSDCDG00000028930)	FAM169A (ENSDCDG00000028929) #9	GCNT4 (ENSDCDG00000028927) #10	hmgcrb (ENSDCDG00000027394) #12	CERT1 (ENSDCDG00000027303) #13	SV2C (ENSDCDG00000027291) #18	F2RL2 (ENSDCDG00000027288) #19	f2rl1.1 (ENSDCDG00000027287) #22	f2rl1.2 (ENSDCDG00000027286) #22	f2rl1.2 (ENSDCDG00000027284) #22	ch25hl2 (ENSDCDG00000027283)	s100z (ENSDCDG00000027282) #23	crhbp (ENSDCDG00000027281) #24	aggf1 (ENSDCDG00000027278) #25	ENSDCDG00000027275	PDE8B (ENSDCDG00000027214) #27	wdr41 (ENSDCDG00000027205) #28	otpa (ENSDCDG00000027203) #29	tbca (ENSDCDG00000027202) #30	AP3B1 (ENSDCDG00000020440) #31	scamp1 (ENSDCDG00000020319) #33	lhfpl2a (ENSDCDG00000020317) #34	ARSB (ENSDCDG00000020316) #36
Denticle herring	MODERN SPECIES	13	nsa2 (ENSDCDG00000012992) #7	tor1 (ENSDCDG00000012982)	notch1a (ENSDCDG00000012926)	camsap1a (ENSDCDG00000012916)	ENSDCDG00000011796	ENSDCDG00000011754	rpl28 (ENSDCDG00000011753)	pdcl (ENSDCDG00000011751)	rpl37 (ENSDCDG00000011745)	st8sia5 (ENSDCDG00000011738)	atp5fa1 (ENSDCDG00000010991)	haus1 (ENSDCDG00000010956)	zgc:77838 (ENSDCDG00000010949)	RNF165 (ENSDCDG00000010944)	LOXHD1 (ENSDCDG00000010896)	f2rl1.1 (ENSDCDG00000010882) #22	ENSDCDG00000010881	ENSDCDG00000010876	ENSDCDG00000010870	ENSDCDG00000010863	ENSDCDG00000010859	ENSDCDG00000010850	ENSDCDG00000010843	SDK1 (ENSDCDG00000005539)	GNA12 (ENSDCDG00000005485)	brat1 (ENSDCDG00000005484)	ENSDCDG00000005479	ENSDCDG00000005474	ttyh3b (ENSDCDG00000005471)	iqce (ENSDCDG00000005465)	ENSDCDG00000005462
Otophysi	ANCESTRAL SPECIES	248										ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118
Characiphysae	ANCESTRAL SPECIES	68										ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118
Characiphysae_b	ANCESTRAL SPECIES	73										ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118
Characoidei	ANCESTRAL SPECIES	67										ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	2507																f2rl1.1 (ENSPNAG00000014324) #22
Red-bellied piranha	MODERN SPECIES	1736															f2rl1.1 (ENSPNAG00000020536) #22	f2rl1.1 (ENSPNAG00000020556) #22	f2rl1.2 (ENSPNAG00000020567) #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1736																f2rl1.1 (ENSPNAG00000020536) #22	f2rl1.1 (ENSPNAG00000020556) #22	f2rl1.2 (ENSPNAG00000020567) #22
Red-bellied piranha	MODERN SPECIES	2435																f2rl1.1 (ENSPNAG00000015452) #22
Red-bellied piranha	MODERN SPECIES	2268																f2rl1.1 (ENSPNAG00000003070) #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	2459																f2rl1.1 (ENSPNAG00000015002) #22
Red-bellied piranha	MODERN SPECIES	2434																f2rl1.1 (ENSPNAG00000015465) #22
Red-bellied piranha	MODERN SPECIES	2491																f2rl1.1 (ENSPNAG00000003170) #22
Red-bellied piranha	MODERN SPECIES	1929														f2rl1.1 (ENSPNAG00000029152) #22	f2rl1.1 (ENSPNAG00000029145) #22	f2rl1.1 (ENSPNAG00000029136) #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1929																f2rl1.1 (ENSPNAG00000029152) #22	f2rl1.1 (ENSPNAG00000029145) #22	f2rl1.1 (ENSPNAG00000029136) #22
Red-bellied piranha	MODERN SPECIES	1869																f2rl1.1 (ENSPNAG00000011448) #22	f2rl1.1 (ENSPNAG00000001734) #22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1869															f2rl1.1 (ENSPNAG00000011448) #22	f2rl1.1 (ENSPNAG00000001734) #22
Red-bellied piranha	MODERN SPECIES	1929															f2rl1.1 (ENSPNAG00000029152) #22	f2rl1.1 (ENSPNAG00000029145) #22	f2rl1.1 (ENSPNAG00000029136) #22
Red-bellied piranha	MODERN SPECIES	1901															f2r2.1 (ENSPNAG00000010761) #21	f2rl1.1 (ENSPNAG00000010768) #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	5	AP3B1 (ENSAMXG00000041586) #31	tbca (ENSAMXG00000038893) #30	otpa (ENSAMXG00000005573) #29	wdr41 (ENSAMXG00000019497) #28	PDE8B (ENSAMXG00000019516) #27	aggf1 (ENSAMXG00000042451) #25	crhbp (ENSAMXG00000019578) #24	s100z (ENSAMXG00000036740) #23	ch25hl2 (ENSAMXG00000024958)	f2rl1.2 (ENSAMXG00000041505) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000038686) #22	ENSAMXG00000039800	F2R (ENSAMXG00000032056) #21	f2rl1.1 (ENSAMXG00000040817) #22	ENSAMXG00000036268	ENSAMXG00000037670	ENSAMXG00000032401	ENSAMXG00000034277	OLFML2A (ENSAMXG00000040497)	nr5a1b (ENSAMXG00000019765)	psmb7 (ENSAMXG00000036576)	NEK6 (ENSAMXG00000019792)	DENND1A (ENSAMXG00000019807)	ENSAMXG00000019838
Mexicana tetra	MODERN SPECIES	715																f2rl1.1 (ENSAMXG00000037041) #22	f2rl1.1 (ENSAMXG00000041970) #22	f2rl1.1 (ENSAMXG00000035899) #22
Mexicana tetra	MODERN SPECIES	715															f2rl1.1 (ENSAMXG00000037041) #22	f2rl1.1 (ENSAMXG00000041970) #22	f2rl1.1 (ENSAMXG00000035899) #22
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000041169	ENSAMXG00000019838	DENND1A (ENSAMXG00000019807)	NEK6 (ENSAMXG00000019792)	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30
Mexicana tetra	MODERN SPECIES	715																f2rl1.1 (ENSAMXG00000035899) #22	f2rl1.1 (ENSAMXG00000041970) #22	f2rl1.1 (ENSAMXG00000037041) #22
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	5	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31	ENSAMXG00000033430	egfl7 (ENSAMXG00000037257)	agpat2 (ENSAMXG00000030286)	dipk1b (ENSAMXG00000030250)
Mexicana tetra	MODERN SPECIES	5	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31	ENSAMXG00000033430	egfl7 (ENSAMXG00000037257)	agpat2 (ENSAMXG00000030286)
Mexicana tetra	MODERN SPECIES	5	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31	ENSAMXG00000033430	egfl7 (ENSAMXG00000037257)
Mexicana tetra	MODERN SPECIES	5	NEK6 (ENSAMXG00000019792)	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31	ENSAMXG00000033430
Mexicana tetra	MODERN SPECIES	5	aggf1 (ENSAMXG00000042451) #25	crhbp (ENSAMXG00000019578) #24	s100z (ENSAMXG00000036740) #23	ch25hl2 (ENSAMXG00000024958)	f2rl1.2 (ENSAMXG00000041505) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000038686) #22	ENSAMXG00000039800	F2R (ENSAMXG00000032056) #21	f2rl1.1 (ENSAMXG00000040817) #22	ENSAMXG00000036268	ENSAMXG00000037670	ENSAMXG00000032401	ENSAMXG00000034277	OLFML2A (ENSAMXG00000040497)	nr5a1b (ENSAMXG00000019765)	psmb7 (ENSAMXG00000036576)	NEK6 (ENSAMXG00000019792)	DENND1A (ENSAMXG00000019807)	ENSAMXG00000019838	ENSAMXG00000041169	ENSAMXG00000029161	msx2b (ENSAMXG00000041559)	ENSAMXG00000043317	drd1b (ENSAMXG00000024960)
Mexicana tetra	MODERN SPECIES	5	DENND1A (ENSAMXG00000019807)	NEK6 (ENSAMXG00000019792)	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000029161	ENSAMXG00000041169	ENSAMXG00000019838	DENND1A (ENSAMXG00000019807)	NEK6 (ENSAMXG00000019792)	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29
Electric eel	DUPLICATION
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	1316															f2r2.1 (ENSEEEG00000010836) #21	f2rl1.1 (ENSEEEG00000010834) #22	f2rl1.1 (ENSEEEG00000010833) #22	f2rl1.1 (ENSEEEG00000010831) #22	ENSEEEG00000010828	f2rl1.2 (ENSEEEG00000010827) #22
Electric eel	MODERN SPECIES	1316														f2r2.1 (ENSEEEG00000010836) #21	f2rl1.1 (ENSEEEG00000010834) #22	f2rl1.1 (ENSEEEG00000010833) #22	f2rl1.1 (ENSEEEG00000010831) #22	ENSEEEG00000010828	f2rl1.2 (ENSEEEG00000010827) #22
Electric eel	MODERN SPECIES	1316													f2r2.1 (ENSEEEG00000010836) #21	f2rl1.1 (ENSEEEG00000010834) #22	f2rl1.1 (ENSEEEG00000010833) #22	f2rl1.1 (ENSEEEG00000010831) #22	ENSEEEG00000010828	f2rl1.2 (ENSEEEG00000010827) #22
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00950000183015.D	ENSGT00940000153692.A	ENSGT00940000155133.b	ENSGT00390000010355	ENSGT01060000253463	ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01060000248575.C	ENSGT00940000153391.c.b.a.j.a	ENSGT00940000157936	ENSGT00940000157194.d	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817.c #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00390000010355.c	ENSGT00940000153232.b.g	ENSGT00940000160615.a.b	ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c
Cyprininae_a	ANCESTRAL SPECIES	201					ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000159990.e	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c	ENSGT00390000001362.b.b #24	ENSGT00940000157817.c.a.a #27	ENSGT00390000017026.g #28	ENSGT00940000159952.a.b.d #29	ENSGT00390000009710.d #30	ENSGT00940000157603.lb #31	ENSGT00940000160015.h	ENSGT00390000008726.h.a.b	ENSGT00390000006452.b.a.g	ENSGT00390000017382.k	ENSGT00390000014118.i	ENSGT00940000156959.A.c.a.b	ENSGT00940000159211.C.jb.b.e
Golden-line barbel	MODERN SPECIES	69			ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)	agpat2 (ENSSGRG00000033002)	dipk1b (ENSSGRG00000033004)	mrps2 (ENSSGRG00000033007)	olfm1b (ENSSGRG00000033010)
Common carp reference	MODERN SPECIES	45	ptpn13 (ENSCCRG00000011159)	sdad1 (ENSCCRG00000011377)	ENSCCRG00000034735	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)	dipk1b (ENSCCRG00000056748)	ppp1r26 (ENSCCRG00000014473)	olfm1b (ENSCCRG00000060118)	ENSCCRG00000046852
Goldfish	MODERN SPECIES	13	ENSCARG00000012628	ENSCARG00000012631	ENSCARG00000012638	hm13 (ENSCARG00000012660)	ENSCARG00000013086	DENND1A (ENSCARG00000013107)	lhx2a (ENSCARG00000013150)	ENSCARG00000013179	psmb7 (ENSCARG00000013272)	nr5a1b (ENSCARG00000013417)	nr6a1b (ENSCARG00000013430)	OLFML2A (ENSCARG00000013453)	F2R (ENSCARG00000013459) #21	ENSCARG00000013464 #21	F2R (ENSCARG00000013473) #21	f2rl1.1 (ENSCARG00000013486) #22	f2rl1.2 (ENSCARG00000013494) #22	ch25hl2 (ENSCARG00000013499)	rnf180b (ENSCARG00000013507)	ENSCARG00000013518	rgs7bpb (ENSCARG00000013527)	C6 (ENSCARG00000013562)	oxct1b (ENSCARG00000014065)	ghrb (ENSCARG00000017221)	ENSCARG00000017233	ENSCARG00000017239	gadd45gb.1 (ENSCARG00000017247)	ppp1r26 (ENSCARG00000017269)	ENSCARG00000017287	LOXHD1 (ENSCARG00000017340)	st8sia5 (ENSCARG00000017801)
Cyprininae	ANCESTRAL SPECIES	447	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000159990.e	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Goldfish	MODERN SPECIES	40	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181	prdx5 (ENSCARG00000069176)	ENSCARG00000069126	bscl2 (ENSCARG00000069099)	gng3 (ENSCARG00000069089)
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31	ENSGT00940000160015.g	ENSGT00390000008726.h.a.a	ENSGT00390000006452.b.a.h
Common carp reference	MODERN SPECIES	38	ENSCCRG00000077647	ENSCCRG00000054544	ENSCCRG00000023244	ENSCCRG00000023239	ENSCCRG00000023193	lhx2a (ENSCCRG00000046488)	psmb7 (ENSCCRG00000074098)	NEK6 (ENSCCRG00000046205)	nr5a1b (ENSCCRG00000016558)	nr6a1b (ENSCCRG00000041881)	ENSCCRG00000074926	F2R (ENSCCRG00000059546) #21	F2R (ENSCCRG00000077171) #21	F2R (ENSCCRG00000037167) #21	ENSCCRG00000055039 #21	f2rl1.1 (ENSCCRG00000081208) #22	S100Z (ENSCCRG00000058180) #23	ch25hl2 (ENSCCRG00000059117)	aggf1 (ENSCCRG00000036413) #25	crhbp (ENSCCRG00000029542) #24	PDE8B (ENSCCRG00000052016) #27	wdr41 (ENSCCRG00000080357) #28	otpa (ENSCCRG00000031449) #29	tbca (ENSCCRG00000071108) #30	AP3B1 (ENSCCRG00000072213) #31	egfl7 (ENSCCRG00000007399)	agpat2 (ENSCCRG00000065975)	dipk1b (ENSCCRG00000061312)	ppp1r26 (ENSCCRG00000077967)	olfm1b (ENSCCRG00000027210)	ENSCCRG00000080133
Golden-line barbel	MODERN SPECIES	60	mapk10 (ENSSGRG00000049430)	ptpn13 (ENSSGRG00000051041)	sdad1 (ENSSGRG00000051393)	ENSSGRG00000051556	CRB2 (ENSSGRG00000051557)	DENND1A (ENSSGRG00000051566)	lhx2a (ENSSGRG00000051632)	NEK6 (ENSSGRG00000051636)	psmb7 (ENSSGRG00000051638)	nr5a1b (ENSSGRG00000051754)	nr6a1b (ENSSGRG00000051757)	OLFML2A (ENSSGRG00000051767)	F2R (ENSSGRG00000051768) #21	F2R (ENSSGRG00000051769) #21	F2R (ENSSGRG00000051770) #21	f2rl1.1 (ENSSGRG00000051772) #22	f2rl1.2 (ENSSGRG00000051773) #22	ch25hl2 (ENSSGRG00000051774)	s100z (ENSSGRG00000051775) #23	crhbp (ENSSGRG00000000115) #24	aggf1 (ENSSGRG00000000196) #25	PDE8B (ENSSGRG00000000287) #27	wdr41 (ENSSGRG00000000371) #28	otpa (ENSSGRG00000000460) #29	ENSSGRG00000000466	AP3B1 (ENSSGRG00000000515) #31	egfl7 (ENSSGRG00000001475)	agpat2 (ENSSGRG00000001488)	dipk1b (ENSSGRG00000001503)	mrps2 (ENSSGRG00000001507)	ppp1r26 (ENSSGRG00000001508)
Zebrafish	MODERN SPECIES	13	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31	ENSDARG00000110056 #31	egfl7 (ENSDARG00000100657)	agpat2 (ENSDARG00000101139)	dipk1b (ENSDARG00000117093)
Osteoglossiformes	ANCESTRAL SPECIES	83												ENSGT00940000164571	ENSGT00950000182940.b.b.h #18	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b.h #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.j #33	ENSGT00990000203589.b.b.d #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a	ENSGT00510000046704.b.a.e
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	2	ENC1 (ENSPKIG00000019024)	hexb (ENSPKIG00000018938)	gfm2 (ENSPKIG00000018878)	nsa2 (ENSPKIG00000018852) #7	FAM169A (ENSPKIG00000018819) #9	GCNT4 (ENSPKIG00000018802) #10	hmgcra (ENSPKIG00000018702) #12	ENSPKIG00000018585 #13	ENSPKIG00000018516	ENSPKIG00000018484	SV2C (ENSPKIG00000018429) #18	F2RL2 (ENSPKIG00000018396) #19	F2R (ENSPKIG00000018365) #21	f2rl1.2 (ENSPKIG00000018335) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.2 (ENSPKIG00000018301) #22	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247) #23	crhbp (ENSPKIG00000018218) #24	aggf1 (ENSPKIG00000018193) #25	PDE8B (ENSPKIG00000018112) #27	wdr41 (ENSPKIG00000018046) #28	otpa (ENSPKIG00000018024) #29	tbca (ENSPKIG00000018004) #30	AP3B1 (ENSPKIG00000017939) #31	SCAMP1 (ENSPKIG00000017903) #33	lhfpl2a (ENSPKIG00000017855) #34	ARSB (ENSPKIG00000017800) #36	DMGDH (ENSPKIG00000017764) #37
P. kingsleyae	MODERN SPECIES	2	ARHGEF28 (ENSPKIG00000019115)	ENC1 (ENSPKIG00000019024)	hexb (ENSPKIG00000018938)	gfm2 (ENSPKIG00000018878)	nsa2 (ENSPKIG00000018852) #7	FAM169A (ENSPKIG00000018819) #9	GCNT4 (ENSPKIG00000018802) #10	hmgcra (ENSPKIG00000018702) #12	ENSPKIG00000018585 #13	ENSPKIG00000018516	ENSPKIG00000018484	SV2C (ENSPKIG00000018429) #18	F2RL2 (ENSPKIG00000018396) #19	F2R (ENSPKIG00000018365) #21	f2rl1.2 (ENSPKIG00000018335) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.2 (ENSPKIG00000018301) #22	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247) #23	crhbp (ENSPKIG00000018218) #24	aggf1 (ENSPKIG00000018193) #25	PDE8B (ENSPKIG00000018112) #27	wdr41 (ENSPKIG00000018046) #28	otpa (ENSPKIG00000018024) #29	tbca (ENSPKIG00000018004) #30	AP3B1 (ENSPKIG00000017939) #31	SCAMP1 (ENSPKIG00000017903) #33	lhfpl2a (ENSPKIG00000017855) #34	ARSB (ENSPKIG00000017800) #36
Asian bonytongue	MODERN SPECIES	21	ankra2 (ENSSFOG00015015678)	utp15 (ENSSFOG00015015712)	ARHGEF28 (ENSSFOG00015015817)	ENC1 (ENSSFOG00015025627)	hexb (ENSSFOG00015015989)	gfm2 (ENSSFOG00015016059)	nsa2 (ENSSFOG00015016191) #7	fam169aa (ENSSFOG00015016217) #9	GCNT4 (ENSSFOG00015016238) #10	hmgcra (ENSSFOG00015016250) #12	ENSSFOG00015016294 #13	ENSSFOG00015016366	SV2C (ENSSFOG00015016383) #18	F2RL2 (ENSSFOG00015029501) #19	F2R (ENSSFOG00015028768) #21	f2rl1.1 (ENSSFOG00015016419) #22	ch25hl2 (ENSSFOG00015028366)	ENSSFOG00015016427	s100z (ENSSFOG00015016441) #23	crhbp (ENSSFOG00015016445) #24	aggf1 (ENSSFOG00015016459) #25	PDE8B (ENSSFOG00015016473) #27	wdr41 (ENSSFOG00015016506) #28	otpa (ENSSFOG00015016563) #29	tbca (ENSSFOG00015030159) #30	AP3B1 (ENSSFOG00015016624) #31	SCAMP1 (ENSSFOG00015016716) #33	lhfpl2a (ENSSFOG00015031014) #34	ARSB (ENSSFOG00015016765) #36	DMGDH (ENSSFOG00015016787) #37	bhmt (ENSSFOG00015016840)
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a	ENSGT00510000046704.b.a
Clupeocephala	ANCESTRAL SPECIES	160	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Clupeiformes	ANCESTRAL SPECIES	129	ENSGT00390000012762.u	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	13	ENSDCDG00000029964	aqp3b (ENSDCDG00000029961)	unc5da (ENSDCDG00000028972)	tnfrsfa (ENSDCDG00000028939)	zgc:193801 (ENSDCDG00000028935)	mzt2b (ENSDCDG00000028932)	lhx5 (ENSDCDG00000028930)	FAM169A (ENSDCDG00000028929) #9	GCNT4 (ENSDCDG00000028927) #10	hmgcrb (ENSDCDG00000027394) #12	CERT1 (ENSDCDG00000027303) #13	SV2C (ENSDCDG00000027291) #18	F2RL2 (ENSDCDG00000027288) #19	f2rl1.1 (ENSDCDG00000027287) #22	f2rl1.2 (ENSDCDG00000027286) #22	f2rl1.2 (ENSDCDG00000027284) #22	ch25hl2 (ENSDCDG00000027283)	s100z (ENSDCDG00000027282) #23	crhbp (ENSDCDG00000027281) #24	aggf1 (ENSDCDG00000027278) #25	ENSDCDG00000027275	PDE8B (ENSDCDG00000027214) #27	wdr41 (ENSDCDG00000027205) #28	otpa (ENSDCDG00000027203) #29	tbca (ENSDCDG00000027202) #30	AP3B1 (ENSDCDG00000020440) #31	scamp1 (ENSDCDG00000020319) #33	lhfpl2a (ENSDCDG00000020317) #34	ARSB (ENSDCDG00000020316) #36	DMGDH (ENSDCDG00000018398) #37	bhmt (ENSDCDG00000018312)
Denticle herring	MODERN SPECIES	13	ENSDCDG00000029969	ENSDCDG00000029964	aqp3b (ENSDCDG00000029961)	unc5da (ENSDCDG00000028972)	tnfrsfa (ENSDCDG00000028939)	zgc:193801 (ENSDCDG00000028935)	mzt2b (ENSDCDG00000028932)	lhx5 (ENSDCDG00000028930)	FAM169A (ENSDCDG00000028929) #9	GCNT4 (ENSDCDG00000028927) #10	hmgcrb (ENSDCDG00000027394) #12	CERT1 (ENSDCDG00000027303) #13	SV2C (ENSDCDG00000027291) #18	F2RL2 (ENSDCDG00000027288) #19	f2rl1.1 (ENSDCDG00000027287) #22	f2rl1.2 (ENSDCDG00000027286) #22	f2rl1.2 (ENSDCDG00000027284) #22	ch25hl2 (ENSDCDG00000027283)	s100z (ENSDCDG00000027282) #23	crhbp (ENSDCDG00000027281) #24	aggf1 (ENSDCDG00000027278) #25	ENSDCDG00000027275	PDE8B (ENSDCDG00000027214) #27	wdr41 (ENSDCDG00000027205) #28	otpa (ENSDCDG00000027203) #29	tbca (ENSDCDG00000027202) #30	AP3B1 (ENSDCDG00000020440) #31	scamp1 (ENSDCDG00000020319) #33	lhfpl2a (ENSDCDG00000020317) #34	ARSB (ENSDCDG00000020316) #36	DMGDH (ENSDCDG00000018398) #37
Atlantic herring	MODERN SPECIES	3	rln1 (ENSCHAG00000011415)	jak2a (ENSCHAG00000008676)	DTWD2 (ENSCHAG00000008583)	HOMER1 (ENSCHAG00000008500)	JMY (ENSCHAG00000008365)	bhmt (ENSCHAG00000008253)	tbca (ENSCHAG00000008227) #30	scamp1 (ENSCHAG00000008150) #33	ARSB (ENSCHAG00000007970) #36	ARSB (ENSCHAG00000007889) #36	ENSCHAG00000007860	wdr41 (ENSCHAG00000007850) #28	aggf1 (ENSCHAG00000007708) #25	s100z (ENSCHAG00000007692) #23	ch25hl2 (ENSCHAG00000007670)	f2rl1.2 (ENSCHAG00000007661) #22	ENSCHAG00000007613	ENSCHAG00000007572	ENSCHAG00000007553
Otophysi	ANCESTRAL SPECIES	248									ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00940000156959.A.c.a
Characiphysae	ANCESTRAL SPECIES	68									ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00940000156959.A.c.a
Channel catfish	MODERN SPECIES	9	ENSIPUG00000021199	FNBP1 (ENSIPUG00000021216)	CDK9 (ENSIPUG00000021301)	cdk9 (ENSIPUG00000021318)	olfm1b (ENSIPUG00000021337)	ppp1r26 (ENSIPUG00000021349)	fam69b (ENSIPUG00000021354)	agpat2 (ENSIPUG00000021366)	EGFL7 (ENSIPUG00000021382)	ap3b1 (ENSIPUG00000021394) #31	tbca (ENSIPUG00000021474) #30	otpa (ENSIPUG00000021492) #29	s100z (ENSIPUG00000021500) #23	ch25hl2 (ENSIPUG00000021505)	ENSIPUG00000021507	f2rl1 (ENSIPUG00000021530) #22	psmb7 (ENSIPUG00000021532)	aggf1 (ENSIPUG00000021569) #25	wdr41 (ENSIPUG00000021613) #28	nr5a1b (ENSIPUG00000021672)	uqcr10 (ENSIPUG00000022177)	rpl35 (ENSIPUG00000022186)	wdr38 (ENSIPUG00000022200)	F2RL2 (ENSIPUG00000022237) #19	ENSIPUG00000022239	CCNG2 (ENSIPUG00000022244)	ccni (ENSIPUG00000022251)	ENSIPUG00000022269	ENSIPUG00000022274	ENSIPUG00000022286	ENSIPUG00000022292
Characiphysae_b	ANCESTRAL SPECIES	73									ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00940000156959.A.c.a
Electric eel	MODERN SPECIES	1316											f2r2.1 (ENSEEEG00000010836) #21	f2rl1.1 (ENSEEEG00000010834) #22	f2rl1.1 (ENSEEEG00000010833) #22	f2rl1.1 (ENSEEEG00000010831) #22	ENSEEEG00000010828	f2rl1.2 (ENSEEEG00000010827) #22
Characoidei	ANCESTRAL SPECIES	67									ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00950000183007.b.e.b.a.d
Red-bellied piranha	MODERN SPECIES	1736														f2rl1.1 (ENSPNAG00000020536) #22	f2rl1.1 (ENSPNAG00000020556) #22	f2rl1.2 (ENSPNAG00000020567) #22
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27	wdr41 (ENSAMXG00000019497) #28	otpa (ENSAMXG00000005573) #29	tbca (ENSAMXG00000038893) #30	AP3B1 (ENSAMXG00000041586) #31	ENSAMXG00000039059 #31	ENSAMXG00000033430	egfl7 (ENSAMXG00000037257)	agpat2 (ENSAMXG00000030286)	dipk1b (ENSAMXG00000030250)	ENSAMXG00000029280
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00940000153692.A	ENSGT00940000155133.b	ENSGT00390000010355	ENSGT01060000253463	ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01060000248575.C	ENSGT00940000153391.c.b.a.j.a	ENSGT00940000157936	ENSGT00940000157194.d	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817.c #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00940000156959.A.c.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	447	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000159990.e	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	40	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181	prdx5 (ENSCARG00000069176)	ENSCARG00000069126	bscl2 (ENSCARG00000069099)	gng3 (ENSCARG00000069089)	banf1 (ENSCARG00000069082)
Goldfish	MODERN SPECIES	2468																f2rl1.2 (ENSCARG00000039493) #22	ch25hl2 (ENSCARG00000039497)	s100z (ENSCARG00000039501) #23	crhbp (ENSCARG00000039512) #24	aggf1 (ENSCARG00000039528) #25
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31	ENSGT00940000160015.g	ENSGT00390000008726.h.a.a	ENSGT00390000006452.b.a.h	ENSGT00390000017382.l
Golden-line barbel	MODERN SPECIES	60	ptpn13 (ENSSGRG00000051041)	sdad1 (ENSSGRG00000051393)	ENSSGRG00000051556	CRB2 (ENSSGRG00000051557)	DENND1A (ENSSGRG00000051566)	lhx2a (ENSSGRG00000051632)	NEK6 (ENSSGRG00000051636)	psmb7 (ENSSGRG00000051638)	nr5a1b (ENSSGRG00000051754)	nr6a1b (ENSSGRG00000051757)	OLFML2A (ENSSGRG00000051767)	F2R (ENSSGRG00000051768) #21	F2R (ENSSGRG00000051769) #21	F2R (ENSSGRG00000051770) #21	f2rl1.1 (ENSSGRG00000051772) #22	f2rl1.2 (ENSSGRG00000051773) #22	ch25hl2 (ENSSGRG00000051774)	s100z (ENSSGRG00000051775) #23	crhbp (ENSSGRG00000000115) #24	aggf1 (ENSSGRG00000000196) #25	PDE8B (ENSSGRG00000000287) #27	wdr41 (ENSSGRG00000000371) #28	otpa (ENSSGRG00000000460) #29	ENSSGRG00000000466	AP3B1 (ENSSGRG00000000515) #31	egfl7 (ENSSGRG00000001475)	agpat2 (ENSSGRG00000001488)	dipk1b (ENSSGRG00000001503)	mrps2 (ENSSGRG00000001507)	ppp1r26 (ENSSGRG00000001508)	olfm1b (ENSSGRG00000001512)
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00940000153232.b.g	ENSGT00940000160615.a.b	ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c
Cyprininae_a	ANCESTRAL SPECIES	201				ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000159990.e	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c	ENSGT00390000001362.b.b #24	ENSGT00940000157817.c.a.a #27	ENSGT00390000017026.g #28	ENSGT00940000159952.a.b.d #29	ENSGT00390000009710.d #30	ENSGT00940000157603.lb #31	ENSGT00940000160015.h	ENSGT00390000008726.h.a.b	ENSGT00390000006452.b.a.g	ENSGT00390000017382.k	ENSGT00390000014118.i	ENSGT00940000156959.A.c.a.b	ENSGT00940000159211.C.jb.b.e	ENSGT00390000003044
Golden-line barbel	MODERN SPECIES	69		ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)	agpat2 (ENSSGRG00000033002)	dipk1b (ENSSGRG00000033004)	mrps2 (ENSSGRG00000033007)	olfm1b (ENSSGRG00000033010)	ENSSGRG00000033019
Common carp reference	MODERN SPECIES	45	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)	dipk1b (ENSCCRG00000056748)	ppp1r26 (ENSCCRG00000014473)	olfm1b (ENSCCRG00000060118)	ENSCCRG00000046852	ENSCCRG00000073805	ENSCCRG00000076877	ENSCCRG00000022824
Goldfish	MODERN SPECIES	13	ENSCARG00000012631	ENSCARG00000012638	hm13 (ENSCARG00000012660)	ENSCARG00000013086	DENND1A (ENSCARG00000013107)	lhx2a (ENSCARG00000013150)	ENSCARG00000013179	psmb7 (ENSCARG00000013272)	nr5a1b (ENSCARG00000013417)	nr6a1b (ENSCARG00000013430)	OLFML2A (ENSCARG00000013453)	F2R (ENSCARG00000013459) #21	ENSCARG00000013464 #21	F2R (ENSCARG00000013473) #21	f2rl1.1 (ENSCARG00000013486) #22	f2rl1.2 (ENSCARG00000013494) #22	ch25hl2 (ENSCARG00000013499)	rnf180b (ENSCARG00000013507)	ENSCARG00000013518	rgs7bpb (ENSCARG00000013527)	C6 (ENSCARG00000013562)	oxct1b (ENSCARG00000014065)	ghrb (ENSCARG00000017221)	ENSCARG00000017233	ENSCARG00000017239	gadd45gb.1 (ENSCARG00000017247)	ppp1r26 (ENSCARG00000017269)	ENSCARG00000017287	LOXHD1 (ENSCARG00000017340)	st8sia5 (ENSCARG00000017801)	ENSCARG00000017871
Zebrafish	MODERN SPECIES	13	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31	ENSDARG00000110056 #31	egfl7 (ENSDARG00000100657)	agpat2 (ENSDARG00000101139)	dipk1b (ENSDARG00000117093)	zgc:113019 (ENSDARG00000099743)
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156571	ENSGT00940000155967	ENSGT00510000047710	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00940000170540	ENSGT00940000159952.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Tiger tail seahorse	MODERN SPECIES	547											ENSHCOG00000010964	CERT1 (ENSHCOG00000011013) #13	SV2C (ENSHCOG00000011047) #18	F2RL2 (ENSHCOG00000011054) #19	f2r2.1 (ENSHCOG00000011058) #21	f2rl1.2 (ENSHCOG00000011067) #22	ch25hl2 (ENSHCOG00000011084)	s100z (ENSHCOG00000011089) #23	crhbp (ENSHCOG00000011105) #24
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Turquoise killifish	MODERN SPECIES	1611	plac8.1 (ENSNFUG00015008759)	ENSNFUG00015008765	ADAMTS6 (ENSNFUG00015008782)	cwc27 (ENSNFUG00015008838)	ppwd1 (ENSNFUG00015008872)	trim23 (ENSNFUG00015009218)	mzt2b (ENSNFUG00015009462)	lhx5 (ENSNFUG00015009471)	GCNT4 (ENSNFUG00015009486) #10	HMGCRB (ENSNFUG00015009514) #12	COL4A3BP (ENSNFUG00015009754) #13	SV2C (ENSNFUG00015010761) #18	F2RL2 (ENSNFUG00015010814) #19	Nfu_g_1_006533 (ENSNFUG00015010823) #21	f2rl1.1 (ENSNFUG00015010828) #22	F2RL1.2 (ENSNFUG00015010834) #22	ch25hl2 (ENSNFUG00015010842)	S100Z (ENSNFUG00015010858) #23	CRHBP (ENSNFUG00015003890) #24	PDE8B (ENSNFUG00015003954) #27	WDR41 (ENSNFUG00015004234) #28	OTPB (ENSNFUG00015004263) #29	tbca (ENSNFUG00015004274) #30	AP3B1 (ENSNFUG00015004371) #31	Nfu_g_1_006313 (ENSNFUG00015004582) #33	LHFPL2A (ENSNFUG00015004591) #34	ARSB (ENSNFUG00015004599) #36	DMGDH (ENSNFUG00015004648) #37	bhmt (ENSNFUG00015005047)	JMY (ENSNFUG00015005078)	HOMER1 (ENSNFUG00015005124)
Mangrove rivulus	MODERN SPECIES	149	ADAMTS6 (ENSKMAG00000011498)	cwc27 (ENSKMAG00000011570)	ppwd1 (ENSKMAG00000011602)	trim23 (ENSKMAG00000011663)	mzt2b (ENSKMAG00000011725)	ENSKMAG00000011767	lhx5 (ENSKMAG00000011869)	GCNT4 (ENSKMAG00000011886) #10	hmgcrb (ENSKMAG00000011914) #12	CERT1 (ENSKMAG00000012022) #13	SV2C (ENSKMAG00000012134) #18	ENSKMAG00000012156	F2RL2 (ENSKMAG00000012168) #19	f2r2.1 (ENSKMAG00000012181) #21	f2rl1.1 (ENSKMAG00000012189) #22	f2rl1.2 (ENSKMAG00000012201) #22	ch25hl2 (ENSKMAG00000012213)	s100z (ENSKMAG00000012227) #23	crhbp (ENSKMAG00000012248) #24
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000155567	ENSGT00390000012762	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00940000168653.b	ENSGT00390000015280	ENSGT00940000159721.h.a #10	ENSGT00940000155305.b.b.c #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Sailfin molly	MODERN SPECIES	502												SV2C (ENSPLAG00000011754) #18	F2RL2 (ENSPLAG00000011769) #19	f2r2.1 (ENSPLAG00000011774) #21	f2rl1.1 (ENSPLAG00000011776) #22	f2rl1.2 (ENSPLAG00000011780) #22	ch25hl2 (ENSPLAG00000011801)	s100z (ENSPLAG00000011835) #23	crhbp (ENSPLAG00000011943) #24	PDE8B (ENSPLAG00000012008) #27	wdr41 (ENSPLAG00000012032) #28	otpa (ENSPLAG00000012052) #29	tbca (ENSPLAG00000012073) #30	AP3B1 (ENSPLAG00000012095) #31	scamp1 (ENSPLAG00000012134) #33	lhfpl2a (ENSPLAG00000012161) #34	ARSB (ENSPLAG00000012289) #36
Amazon molly	MODERN SPECIES	280	ENSPFOG00000010387	arid6 (ENSPFOG00000022560)	ENSPFOG00000023715	unc5da (ENSPFOG00000009678)	tnfrsfa (ENSPFOG00000009564)	ENSPFOG00000022291	trappc13 (ENSPFOG00000009469)	ENSPFOG00000024112	GCNT4 (ENSPFOG00000020252) #10	hmgcrb (ENSPFOG00000009328) #12	CERT1 (ENSPFOG00000009132) #13	SV2C (ENSPFOG00000009066) #18	F2RL2 (ENSPFOG00000009061) #19	f2r2.1 (ENSPFOG00000009051) #21	f2rl1.1 (ENSPFOG00000020251) #22	f2rl1.2 (ENSPFOG00000020250) #22	ch25hl2 (ENSPFOG00000020249)	s100z (ENSPFOG00000009037) #23	crhbp (ENSPFOG00000008990) #24	PDE8B (ENSPFOG00000008456) #27	PDE8B (ENSPFOG00000022318) #27	wdr41 (ENSPFOG00000008295) #28	ENSPFOG00000008261	tbca (ENSPFOG00000008215) #30	AP3B1 (ENSPFOG00000008022) #31	scamp1 (ENSPFOG00000007907) #33	lhfpl2a (ENSPFOG00000007888) #34	ARSB (ENSPFOG00000007724) #36	DMGDH (ENSPFOG00000007360) #37	bhmt (ENSPFOG00000007257)	JMY (ENSPFOG00000007145)
Guppy	MODERN SPECIES	442	plac8.1 (ENSPREG00000018260)	ADAMTS6 (ENSPREG00000018308)	ENSPREG00000018347	cwc27 (ENSPREG00000018364)	ppwd1 (ENSPREG00000018430)	trim23 (ENSPREG00000018458)	mzt2b (ENSPREG00000018479)	lhx5 (ENSPREG00000018491)	GCNT4 (ENSPREG00000018502) #10	hmgcrb (ENSPREG00000018525) #12	CERT1 (ENSPREG00000018596) #13	SV2C (ENSPREG00000018654) #18	F2RL2 (ENSPREG00000018676) #19	f2r2.1 (ENSPREG00000018683) #21	f2rl1.1 (ENSPREG00000018692) #22	f2rl1.2 (ENSPREG00000018699) #22	ENSPREG00000018708	ch25hl2 (ENSPREG00000018722)	s100z (ENSPREG00000018742) #23	crhbp (ENSPREG00000018766) #24	PDE8B (ENSPREG00000018782) #27	wdr41 (ENSPREG00000018815) #28	otpa (ENSPREG00000018848) #29	ENSPREG00000018858	AP3B1 (ENSPREG00000018892) #31	scamp1 (ENSPREG00000018981) #33	lhfpl2a (ENSPREG00000019023) #34	ARSB (ENSPREG00000019046) #36	DMGDH (ENSPREG00000019090) #37	bhmt (ENSPREG00000019126)	JMY (ENSPREG00000019156)
Platyfish	MODERN SPECIES	22	ADAMTS6 (ENSXMAG00000019046)	ENSXMAG00000028220	cwc27 (ENSXMAG00000019028)	ppwd1 (ENSXMAG00000019013)	trim23 (ENSXMAG00000019005)	mzt2b (ENSXMAG00000019000)	lhx5 (ENSXMAG00000025364)	GCNT4 (ENSXMAG00000023542) #10	ENSXMAG00000029435	hmgcrb (ENSXMAG00000018982) #12	CERT1 (ENSXMAG00000018963) #13	SV2C (ENSXMAG00000018926) #18	F2RL2 (ENSXMAG00000018925) #19	f2r2.1 (ENSXMAG00000018922) #21	f2rl1.1 (ENSXMAG00000018920) #22	f2rl1.2 (ENSXMAG00000022315) #22	ch25hl2 (ENSXMAG00000019422)	s100z (ENSXMAG00000018916) #23	crhbp (ENSXMAG00000018907) #24	PDE8B (ENSXMAG00000018842) #27	wdr41 (ENSXMAG00000018834) #28	otpa (ENSXMAG00000029861) #29	tbca (ENSXMAG00000024381) #30	AP3B1 (ENSXMAG00000018805) #31	scamp1 (ENSXMAG00000028164) #33	lhfpl2a (ENSXMAG00000018753) #34	ARSB (ENSXMAG00000018745) #36	DMGDH (ENSXMAG00000018724) #37	bhmt (ENSXMAG00000024462)	JMY (ENSXMAG00000018710)	HOMER1 (ENSXMAG00000018702)
NAME_4	ANCESTRAL SPECIES		ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Mummichog	MODERN SPECIES	2267	plac8.1 (ENSFHEG00000006414)	ADAMTS6 (ENSFHEG00000006381)	cwc27 (ENSFHEG00000006320)	ppwd1 (ENSFHEG00000006293)	trim23 (ENSFHEG00000000170)	mzt2b (ENSFHEG00000006201)	lhx5 (ENSFHEG00000006182)	ENSFHEG00000006150	GCNT4 (ENSFHEG00000006132) #10	hmgcrb (ENSFHEG00000006120) #12	CERT1 (ENSFHEG00000006058) #13	SV2C (ENSFHEG00000005978) #18	F2RL2 (ENSFHEG00000005955) #19	f2r2.1 (ENSFHEG00000000158) #21	f2rl1.1 (ENSFHEG00000005947) #22	f2rl1.2 (ENSFHEG00000005941) #22	ch25hl2 (ENSFHEG00000005932)	s100z (ENSFHEG00000005920) #23	crhbp (ENSFHEG00000005908) #24	PDE8B (ENSFHEG00000005895) #27	wdr41 (ENSFHEG00000005844) #28	otpa (ENSFHEG00000000677) #29	tbca (ENSFHEG00000005810) #30
Sheepshead minnow	MODERN SPECIES	404								lhx5 (ENSCVAG00000013138)	GCNT4 (ENSCVAG00000013140) #10	hmgcrb (ENSCVAG00000013227) #12	CERT1 (ENSCVAG00000013343) #13	SV2C (ENSCVAG00000013393) #18	F2RL2 (ENSCVAG00000013402) #19	f2r2.1 (ENSCVAG00000013411) #21	f2rl1.1 (ENSCVAG00000013419) #22	f2rl1.2 (ENSCVAG00000013422) #22	ch25hl2 (ENSCVAG00000013436)	s100z (ENSCVAG00000013443) #23	ENSCVAG00000013475	ENSCVAG00000000344	itgb1b (ENSCVAG00000013623)	NRP1 (ENSCVAG00000013684)
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000157329	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Oryzias_b	DUPLICATION
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.e #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Indian medaka	MODERN SPECIES	30	ENSOMEG00000018208	ADAMTS6 (ENSOMEG00000018187)	cwc27 (ENSOMEG00000018078)	ENSOMEG00000018032	ppwd1 (ENSOMEG00000017997)	trim23 (ENSOMEG00000017937)	mzt2b (ENSOMEG00000017910)	lhx5 (ENSOMEG00000017880)	hmgcrb (ENSOMEG00000017841) #12	GCNT4 (ENSOMEG00000017718) #10	CERT1 (ENSOMEG00000017675) #13	SV2C (ENSOMEG00000000862) #18	F2RL2 (ENSOMEG00000017449) #19	f2r2.1 (ENSOMEG00000017436) #21	f2rl1.1 (ENSOMEG00000017425) #22	f2rl1.2 (ENSOMEG00000017412) #22	ch25hl2 (ENSOMEG00000017408)	s100z (ENSOMEG00000017389) #23	crhbp (ENSOMEG00000017356) #24	PDE8B (ENSOMEG00000017299) #27	wdr41 (ENSOMEG00000017120) #28	otpa (ENSOMEG00000017048) #29	ENSOMEG00000017042	AP3B1 (ENSOMEG00000017029) #31	scamp1 (ENSOMEG00000016923) #33	lhfpl2a (ENSOMEG00000016802) #34	bhmt (ENSOMEG00000016763)	ARSB (ENSOMEG00000016709) #36	ENSOMEG00000016612 #37	JMY (ENSOMEG00000016581)	HOMER1 (ENSOMEG00000016545)
Javanese ricefish	MODERN SPECIES	3	cops4 (ENSOJAG00000008081)	plac8.1 (ENSOJAG00000008053)	ADAMTS6 (ENSOJAG00000007539)	cwc27 (ENSOJAG00000007407)	ppwd1 (ENSOJAG00000007397)	trim23 (ENSOJAG00000007342)	mzt2b (ENSOJAG00000007325)	lhx5 (ENSOJAG00000007311)	GCNT4 (ENSOJAG00000007303) #10	hmgcrb (ENSOJAG00000007200) #12	CERT1 (ENSOJAG00000007089) #13	SV2C (ENSOJAG00000006583) #18	F2RL2 (ENSOJAG00000006540) #19	f2r2.1 (ENSOJAG00000006533) #21	f2rl1.1 (ENSOJAG00000006526) #22	f2rl1.2 (ENSOJAG00000006457) #22	ch25hl2 (ENSOJAG00000006368)	s100z (ENSOJAG00000006352) #23	crhbp (ENSOJAG00000006339) #24	PDE8B (ENSOJAG00000006231) #27	wdr41 (ENSOJAG00000005989) #28	otpa (ENSOJAG00000005941) #29	tbca (ENSOJAG00000021072) #30	AP3B1 (ENSOJAG00000021042) #31	scamp1 (ENSOJAG00000021017) #33	ENSOJAG00000021004	lhfpl2a (ENSOJAG00000020996) #34	ARSB (ENSOJAG00000020969) #36	DMGDH (ENSOJAG00000020352) #37	bhmt (ENSOJAG00000020234)	JMY (ENSOJAG00000020221)
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000168731	ENSGT00390000008178	ENSGT00940000153408.B.s.a	ENSGT00940000158034	ENSGT00940000154418.a.a.a	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT01050000244840.A.a.a.h.b.f #22	ENSGT00940000154848.a.i.a	ENSGT00940000154848.a.i.b.a	ENSGT00940000154848.a.i.b.b	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929.d	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165200	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000177131	ENSGT00940000156568
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000017335	ENSOJAG00000017352	ENSOJAG00000017359	ENSOJAG00000017364	ENSOJAG00000017389	fancl (ENSOJAG00000017446)	ENSOJAG00000017511	ENSOJAG00000005991	RIMS1 (ENSOJAG00000006120)	asrgl1 (ENSOJAG00000006463)	OGFRL1 (ENSOJAG00000006473)	b3gat2 (ENSOJAG00000006491)	smap1 (ENSOJAG00000006545)	slc1a4 (ENSOJAG00000006577)	sertad2b (ENSOJAG00000006686)	f2rl1.2 (ENSOJAG00000006699) #22	ENSOJAG00000006774	ENSOJAG00000006811	ENSOJAG00000006973	ENSOJAG00000008927	ENSOJAG00000009007	rasgrp3 (ENSOJAG00000009222)	ttc27 (ENSOJAG00000009832)	yipf4 (ENSOJAG00000010957)	exo1 (ENSOJAG00000011028)	ENSOJAG00000011052	PDZD8 (ENSOJAG00000011061)	slc18a2 (ENSOJAG00000011223)	kcnk18 (ENSOJAG00000011613)	ENSOJAG00000011621	ENSOJAG00000014414
Indian medaka	MODERN SPECIES	35	add3a (ENSOMEG00000005168)	mxi1 (ENSOMEG00000005105)	ENSOMEG00000005065	elovl4b (ENSOMEG00000005050)	TENT5A (ENSOMEG00000005030)	ENSOMEG00000005003	PRSS35 (ENSOMEG00000004998)	ENSOMEG00000004992	ENSOMEG00000004982	WDR20 (ENSOMEG00000004971)	hsp90aa1.2 (ENSOMEG00000004944)	ppp2r5cb (ENSOMEG00000004898)	DIO3 (ENSOMEG00000004848)	slc1a4 (ENSOMEG00000004835)	sertad2b (ENSOMEG00000004818)	f2rl1.2 (ENSOMEG00000004804) #22	ENSOMEG00000004770	ENSOMEG00000004760	ENSOMEG00000004744	ENSOMEG00000004721	ENSOMEG00000004696	ENSOMEG00000004665	ENSOMEG00000004629	ENSOMEG00000004586	ENSOMEG00000004527	ENSOMEG00000004514
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000181707	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Chinese medaka	MODERN SPECIES	753	HOMER1 (ENSOSIG00000017839)	JMY (ENSOSIG00000017853)	bhmt (ENSOSIG00000017866)	DMGDH (ENSOSIG00000017872) #37	ARSB (ENSOSIG00000017895) #36	lhfpl2a (ENSOSIG00000017898) #34	scamp1 (ENSOSIG00000017901) #33	AP3B1 (ENSOSIG00000017913) #31	tbca (ENSOSIG00000017957) #30	otpa (ENSOSIG00000017960) #29	crhbp (ENSOSIG00000017963) #24	SV2C (ENSOSIG00000017982) #18	F2RL2 (ENSOSIG00000018032) #19	f2r2.1 (ENSOSIG00000018033) #21	f2rl1.1 (ENSOSIG00000018034) #22	f2rl1.2 (ENSOSIG00000018038) #22	ch25hl2 (ENSOSIG00000018039)	s100z (ENSOSIG00000018041) #23
Japanese Medaka HdrR	MODERN SPECIES	3	ENSORLG00000025212	ADAMTS6 (ENSORLG00000001971)	cwc27 (ENSORLG00000001991)	ENSORLG00000030025	ppwd1 (ENSORLG00000002002)	trim23 (ENSORLG00000002016)	mzt2b (ENSORLG00000002030)	lhx5 (ENSORLG00000002044)	GCNT4 (ENSORLG00000002049) #10	hmgcrb (ENSORLG00000002060) #12	CERT1 (ENSORLG00000002149) #13	SV2C (ENSORLG00000002175) #18	F2RL2 (ENSORLG00000029096) #19	f2r2.1 (ENSORLG00000023591) #21	f2rl1.1 (ENSORLG00000022298) #22	f2rl1.2 (ENSORLG00000002198) #22	ch25hl2 (ENSORLG00000002205)	s100z (ENSORLG00000030634) #23	crhbp (ENSORLG00000002228) #24	PDE8B (ENSORLG00000002273) #27	wdr41 (ENSORLG00000002299) #28	otpa (ENSORLG00000022528) #29	tbca (ENSORLG00000022186) #30	AP3B1 (ENSORLG00000002365) #31	scamp1 (ENSORLG00000002381) #33	lhfpl2a (ENSORLG00000002386) #34	ARSB (ENSORLG00000002398) #36	ENSORLG00000025896	DMGDH (ENSORLG00000002405) #37	bhmt (ENSORLG00000002431)	JMY (ENSORLG00000002448)
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Burton s mouthbrooder	MODERN SPECIES	380													ENSHBUG00000006042 #21	F2R (ENSHBUG00000006089) #21	f2rl1.1 (ENSHBUG00000006111) #22	f2rl1.2 (ENSHBUG00000006100) #22	ch25hl2 (ENSHBUG00000006126)	s100z (ENSHBUG00000006132) #23	crhbp (ENSHBUG00000000153) #24	PDE8B (ENSHBUG00000006197) #27	wdr41 (ENSHBUG00000006222) #28	otpa (ENSHBUG00000006237) #29	tbca (ENSHBUG00000006256) #30	AP3B1 (ENSHBUG00000006320) #31	scamp1 (ENSHBUG00000006341) #33	lhfpl2a (ENSHBUG00000006355) #34	ARSB (ENSHBUG00000006398) #36	DMGDH (ENSHBUG00000006495) #37	bhmt (ENSHBUG00000006515)	JMY (ENSHBUG00000006526)	HOMER1 (ENSHBUG00000006589)
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Zebra mbuna	MODERN SPECIES	1110	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34	ARSB (ENSMZEG00005006208) #36	ENSMZEG00005006197	DMGDH (ENSMZEG00005006121) #37	bhmt (ENSMZEG00005006090)	JMY (ENSMZEG00005006081)
Eastern happy	MODERN SPECIES	19	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33	lhfpl2a (ENSACLG00000026258) #34	ARSB (ENSACLG00000026268) #36	ENSACLG00000026286	ENSACLG00000026291	DMGDH (ENSACLG00000026324) #37	bhmt (ENSACLG00000026404)
P. nyererei	MODERN SPECIES	297	ppwd1 (ENSPNYG00000005473)	trim23 (ENSPNYG00000005520)	mzt2b (ENSPNYG00000005538)	lhx5 (ENSPNYG00000005549)	GCNT4 (ENSPNYG00000005563) #10	ENSPNYG00000005572	hmgcrb (ENSPNYG00000005594) #12	CERT1 (ENSPNYG00000005673) #13	SV2C (ENSPNYG00000005738) #18	F2RL2 (ENSPNYG00000005774) #19	F2RL2 (ENSPNYG00000005804) #19	F2R (ENSPNYG00000005812) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005859) #21	f2rl1.1 (ENSPNYG00000005869) #22	f2rl1.2 (ENSPNYG00000005884) #22	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915) #23	crhbp (ENSPNYG00000005959) #24	PDE8B (ENSPNYG00000005997) #27	wdr41 (ENSPNYG00000006061) #28	otpa (ENSPNYG00000006080) #29	tbca (ENSPNYG00000006104) #30	AP3B1 (ENSPNYG00000006176) #31	scamp1 (ENSPNYG00000006292) #33	lhfpl2a (ENSPNYG00000006322) #34	ARSB (ENSPNYG00000006334) #36	DMGDH (ENSPNYG00000006358) #37	bhmt (ENSPNYG00000006436)	JMY (ENSPNYG00000006512)	HOMER1 (ENSPNYG00000006531)
Lyretail cichlid	MODERN SPECIES	419	plac8.1 (ENSNBRG00000019785)	ADAMTS6 (ENSNBRG00000019825)	cwc27 (ENSNBRG00000019906)	ppwd1 (ENSNBRG00000019956)	trim23 (ENSNBRG00000019976)	mzt2b (ENSNBRG00000019985)	lhx5 (ENSNBRG00000019994)	GCNT4 (ENSNBRG00000020005) #10	hmgcrb (ENSNBRG00000020016) #12	CERT1 (ENSNBRG00000020026) #13	SV2C (ENSNBRG00000020050) #18	F2R (ENSNBRG00000020074) #21	F2RL2 (ENSNBRG00000020084) #19	F2R (ENSNBRG00000020103) #21	f2rl1.1 (ENSNBRG00000020117) #22	f2rl1.2 (ENSNBRG00000020123) #22	ch25hl2 (ENSNBRG00000020125)	s100z (ENSNBRG00000020136) #23	crhbp (ENSNBRG00000020174) #24	PDE8B (ENSNBRG00000020198) #27	wdr41 (ENSNBRG00000000420) #28	otpa (ENSNBRG00000000509) #29	tbca (ENSNBRG00000000529) #30	AP3B1 (ENSNBRG00000000578) #31
Nile tilapia	MODERN SPECIES	19	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34	ARSB (ENSONIG00000015486) #36	slc1a1 (ENSONIG00000007386)	DMGDH (ENSONIG00000007381) #37	bhmt (ENSONIG00000007379)	JMY (ENSONIG00000040021)
Midas cichlid	MODERN SPECIES	991															f2rl1.1 (ENSACIG00000016939) #22	f2rl1.2 (ENSACIG00000016930) #22	ch25hl2 (ENSACIG00000016920)	s100z (ENSACIG00000016874) #23	crhbp (ENSACIG00000016747) #24	PDE8B (ENSACIG00000016694) #27	wdr41 (ENSACIG00000016654) #28	otpa (ENSACIG00000016644) #29	ENSACIG00000016630	AP3B1 (ENSACIG00000016606) #31	ENSACIG00000016574 #31	scamp1 (ENSACIG00000016545) #33	lhfpl2a (ENSACIG00000016531) #34	ARSB (ENSACIG00000016480) #36	DMGDH (ENSACIG00000016447) #37	bhmt (ENSACIG00000016426)	ENSACIG00000016416
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Orange clownfish	MODERN SPECIES	7	lhx5 (ENSAPEG00000004769)	GCNT4 (ENSAPEG00000004763) #10	hmgcrb (ENSAPEG00000004677) #12	CERT1 (ENSAPEG00000004574) #13	ENSAPEG00000004515	SV2C (ENSAPEG00000004477) #18	ENSAPEG00000004446	ENSAPEG00000004414	ENSAPEG00000004380	ENSAPEG00000004369	ENSAPEG00000004345	SV2C (ENSAPEG00000004307) #18	F2RL2 (ENSAPEG00000004295) #19	f2r2.1 (ENSAPEG00000004248) #21	f2rl1.1 (ENSAPEG00000004237) #22	f2rl1.2 (ENSAPEG00000004215) #22	ch25hl2 (ENSAPEG00000004200)	s100z (ENSAPEG00000004132) #23	crhbp (ENSAPEG00000004114) #24	PDE8B (ENSAPEG00000003990) #27	wdr41 (ENSAPEG00000003933) #28	otpa (ENSAPEG00000003913) #29	tbca (ENSAPEG00000003898) #30	ENSAPEG00000003873	AP3B1 (ENSAPEG00000003852) #31	scamp1 (ENSAPEG00000003780) #33	lhfpl2a (ENSAPEG00000003763) #34	scamp1 (ENSAPEG00000003704) #33	ENSAPEG00000003682	scamp1 (ENSAPEG00000003628) #33	ENSAPEG00000003605
Clown anemonefish	MODERN SPECIES	1313													F2RL2 (ENSAOCG00000001624) #19	f2r2.1 (ENSAOCG00000022288) #21	f2rl1.1 (ENSAOCG00000022291) #22	f2rl1.2 (ENSAOCG00000022302) #22	ch25hl2 (ENSAOCG00000022312)	s100z (ENSAOCG00000022366) #23	crhbp (ENSAOCG00000022382) #24	PDE8B (ENSAOCG00000022435) #27	wdr41 (ENSAOCG00000022458) #28	otpa (ENSAOCG00000001634) #29	tbca (ENSAOCG00000022489) #30	AP3B1 (ENSAOCG00000001638) #31	scamp1 (ENSAOCG00000022572) #33	ENSAOCG00000022604	taf6l (ENSAOCG00000022645)	cth1 (ENSAOCG00000001644)	mta2 (ENSAOCG00000022686)	ENSAOCG00000022694
Spiny chromis	MODERN SPECIES	830										CERT1 (ENSAPOG00000017976) #13	ENSAPOG00000017894	SV2C (ENSAPOG00000000802) #18	F2RL2 (ENSAPOG00000017795) #19	f2r2.1 (ENSAPOG00000017788) #21	f2rl1.1 (ENSAPOG00000017781) #22	f2rl1.2 (ENSAPOG00000017767) #22	ch25hl2 (ENSAPOG00000017761)	s100z (ENSAPOG00000017741) #23	crhbp (ENSAPOG00000017678) #24	PDE8B (ENSAPOG00000017665) #27
Bicolor damselfish	MODERN SPECIES	1279											ENSSPAG00000013781	SV2C (ENSSPAG00000013822) #18	F2RL2 (ENSSPAG00000013850) #19	f2r2.1 (ENSSPAG00000013860) #21	f2rl1.1 (ENSSPAG00000013870) #22	f2rl1.2 (ENSSPAG00000013879) #22	ch25hl2 (ENSSPAG00000013882)	s100z (ENSSPAG00000013895) #23	crhbp (ENSSPAG00000013933) #24
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Fugu	MODERN SPECIES	18	lin54 (ENSTRUG00000018428)	cops4 (ENSTRUG00000018422)	plac8 (ENSTRUG00000027976)	ADAMTS6 (ENSTRUG00000018410)	cwc27 (ENSTRUG00000018406)	ppwd1 (ENSTRUG00000018397)	trim23 (ENSTRUG00000018393)	mzt2b (ENSTRUG00000020389)	lhx5 (ENSTRUG00000018387)	GCNT4 (ENSTRUG00000018386) #10	hmgcrb (ENSTRUG00000018375) #12	CERT1 (ENSTRUG00000018369) #13	F2RL2 (ENSTRUG00000027056) #19	SV2C (ENSTRUG00000018362) #18	f2rl1.1 (ENSTRUG00000018352) #22	f2rl1.2 (ENSTRUG00000025409) #22	ch25hl2 (ENSTRUG00000018350)	s100z (ENSTRUG00000029087) #23	crhbp (ENSTRUG00000018344) #24	PDE8B (ENSTRUG00000018324) #27	wdr41 (ENSTRUG00000018319) #28	otpa (ENSTRUG00000018317) #29	tbca (ENSTRUG00000018312) #30	AP3B1 (ENSTRUG00000018286) #31	scamp1 (ENSTRUG00000018272) #33	lhfpl2a (ENSTRUG00000022518) #34	ENSTRUG00000026160	ARSB (ENSTRUG00000003412) #36	DMGDH (ENSTRUG00000003979) #37	bhmt (ENSTRUG00000004203)	JMY (ENSTRUG00000027651)
Tetraodon	MODERN SPECIES	19	sec31a (ENSTNIG00000013497)	lin54 (ENSTNIG00000013496)	cops4 (ENSTNIG00000013495)	plac8.1 (ENSTNIG00000013494)	ADAMTS6 (ENSTNIG00000013493)	cwc27 (ENSTNIG00000013492)	ppwd1 (ENSTNIG00000013491)	trim23 (ENSTNIG00000013490)	lhx5 (ENSTNIG00000013489)	GCNT4 (ENSTNIG00000013488) #10	hmgcrb (ENSTNIG00000013487) #12	CERT1 (ENSTNIG00000013486) #13	SV2C (ENSTNIG00000013485) #18	F2RL2 (ENSTNIG00000013484) #19	ENSTNIG00000000913 #22	f2rl1.2 (ENSTNIG00000013483) #22	ch25hl2 (ENSTNIG00000013482)	s100z (ENSTNIG00000013481) #23	crhbp (ENSTNIG00000013480) #24	PDE8B (ENSTNIG00000013479) #27	wdr41 (ENSTNIG00000013478) #28	otpa (ENSTNIG00000013477) #29	tbca (ENSTNIG00000000561) #30	AP3B1 (ENSTNIG00000013476) #31	scamp1 (ENSTNIG00000013475) #33	lhfpl2a (ENSTNIG00000013474) #34	JMY (ENSTNIG00000013473)	ENSTNIG00000013472	DTWD2 (ENSTNIG00000013471)	tia1 (ENSTNIG00000013470)	C2orf42 (ENSTNIG00000013469)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Ballan wrasse	MODERN SPECIES	528											SV2C (ENSLBEG00000027198) #18	F2RL2 (ENSLBEG00000027190) #19	F2R (ENSLBEG00000027145) #21	F2R (ENSLBEG00000027117) #21	f2rl1.1 (ENSLBEG00000027106) #22	f2rl1.2 (ENSLBEG00000027102) #22	ch25hl2 (ENSLBEG00000027095)	s100z (ENSLBEG00000027087) #23	crhbp (ENSLBEG00000027080) #24	PDE8B (ENSLBEG00000027056) #27	wdr41 (ENSLBEG00000027031) #28	otpa (ENSLBEG00000027017) #29	ENSLBEG00000026976	tbca (ENSLBEG00000026946) #30	AP3B1 (ENSLBEG00000026927) #31	ENSLBEG00000026912 #31
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
European seabass	MODERN SPECIES	9	lin54 (ENSDLAG00005020845)	COPS4 (ENSDLAG00005020910)	plac8.1 (ENSDLAG00005020949)	ENSDLAG00005020960	ENSDLAG00005021155	ENSDLAG00005021185	ENSDLAG00005013686	mzt2b (ENSDLAG00005031291)	ENSDLAG00005028991	GCNT4 (ENSDLAG00005027499) #10	hmgcrb (ENSDLAG00005021232) #12	CERT1 (ENSDLAG00005021764) #13	SV2C (ENSDLAG00005022048) #18	F2RL2 (ENSDLAG00005022059) #19	f2r2.1 (ENSDLAG00005022061) #21	f2rl1.2 (ENSDLAG00005022063) #22	ch25hl2 (ENSDLAG00005022068)	s100z (ENSDLAG00005022069) #23	crhbp (ENSDLAG00005022074) #24	PDE8B (ENSDLAG00005022099) #27	wdr41 (ENSDLAG00005022564) #28	otpa (ENSDLAG00005022587) #29	AP3B1 (ENSDLAG00005022652) #31	SCAMP1 (ENSDLAG00005034904) #33	LHFPL2 (ENSDLAG00005023771) #34	ARSB (ENSDLAG00005023776) #36	DMGDH (ENSDLAG00005000598) #37	bhmt (ENSDLAG00005000880)	JMY (ENSDLAG00005000911)	HOMER1 (ENSDLAG00005029240)	ENSDLAG00005030106
Large yellow croaker	MODERN SPECIES	4	CNNM4 (ENSLCRG00005007667)	CNNM3 (ENSLCRG00005007677)	ENSLCRG00005007680	PURB (ENSLCRG00005007682)	ved (ENSLCRG00005007685)	polm (ENSLCRG00005007689)	mzt2b (ENSLCRG00005007793)	lhx5 (ENSLCRG00005007797)	GCNT4 (ENSLCRG00005007802) #10	hmgcrb (ENSLCRG00005007812) #12	CERT1 (ENSLCRG00005008123) #13	SV2C (ENSLCRG00005010695) #18	F2RL2 (ENSLCRG00005010753) #19	f2r2.1 (ENSLCRG00005010755) #21	f2rl1.1 (ENSLCRG00005010756) #22	f2rl1.2 (ENSLCRG00005010757) #22	s100z (ENSLCRG00005010758) #23	ch25hl2 (ENSLCRG00005010760)	crhbp (ENSLCRG00005010764) #24	PDE8B (ENSLCRG00005010781) #27	wdr41 (ENSLCRG00005010827) #28	otpa (ENSLCRG00005010920) #29	tbca (ENSLCRG00005010923) #30	AP3B1 (ENSLCRG00005010933) #31	scamp1 (ENSLCRG00005011792) #33	lhfpl2a (ENSLCRG00005011798) #34	ARSB (ENSLCRG00005011801) #36	bhmt (ENSLCRG00005011814)	DMGDH (ENSLCRG00005011869) #37	JMY (ENSLCRG00005013114)	HOMER1 (ENSLCRG00005013125)
Gilthead seabream	MODERN SPECIES	3	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30	ENSSAUG00010009054	AP3B1 (ENSSAUG00010009064) #31	scamp1 (ENSSAUG00010009142) #33	lhfpl2a (ENSSAUG00010009145) #34	ARSB (ENSSAUG00010009148) #36	DMGDH (ENSSAUG00010009189) #37
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Stickleback	MODERN SPECIES	13	sec31a (ENSGACG00000015685)	lin54 (ENSGACG00000015693)	cops4 (ENSGACG00000015697)	plac8.1 (ENSGACG00000015705)	ADAMTS6 (ENSGACG00000015707)	cwc27 (ENSGACG00000015712)	ppwd1 (ENSGACG00000015717)	trim23 (ENSGACG00000015730)	mzt2b (ENSGACG00000015736)	GCNT4 (ENSGACG00000015737) #10	hmgcrb (ENSGACG00000015741) #12	CERT1 (ENSGACG00000015744) #13	SV2C (ENSGACG00000015751) #18	F2RL2 (ENSGACG00000015753) #19	ENSGACG00000015755 #22	f2rl1.2 (ENSGACG00000015756) #22	ch25hl2 (ENSGACG00000015757)	s100z (ENSGACG00000015758) #23	crhbp (ENSGACG00000015759) #24	PDE8B (ENSGACG00000015761) #27	wdr41 (ENSGACG00000015762) #28	otpa (ENSGACG00000015770) #29	tbca (ENSGACG00000015771) #30	AP3B1 (ENSGACG00000015772) #31	ARSB (ENSGACG00000015775) #36	DMGDH (ENSGACG00000015777) #37	bhmt (ENSGACG00000015778)	JMY (ENSGACG00000015780)	HOMER1 (ENSGACG00000015784)	ENSGACG00000015792	DTWD2 (ENSGACG00000015793)
Lumpfish	MODERN SPECIES	3	lin54 (ENSCLMG00005018332)	cops4 (ENSCLMG00005018470)	plac8.1 (ENSCLMG00005018495)	ADAMTS6 (ENSCLMG00005018496)	cwc27 (ENSCLMG00005018500)	ppwd1 (ENSCLMG00005018502)	trim23 (ENSCLMG00005018578)	mzt2b (ENSCLMG00005018711)	lhx5 (ENSCLMG00005018712)	GCNT4 (ENSCLMG00005018715) #10	hmgcrb (ENSCLMG00005018721) #12	CERT1 (ENSCLMG00005018833) #13	SV2C (ENSCLMG00005019494) #18	f2r2.1 (ENSCLMG00005019506) #21	f2rl1.1 (ENSCLMG00005019507) #22	f2rl1.2 (ENSCLMG00005019508) #22	ch25hl2 (ENSCLMG00005019509)	s100z (ENSCLMG00005019510) #23	crhbp (ENSCLMG00005004294) #24	PDE8B (ENSCLMG00005004331) #27	wdr41 (ENSCLMG00005004503) #28	otpa (ENSCLMG00005004607) #29	tbca (ENSCLMG00005004813) #30	AP3B1 (ENSCLMG00005004891) #31	scamp1 (ENSCLMG00005010083) #33	lhfpl2a (ENSCLMG00005010085) #34	ARSB (ENSCLMG00005010086) #36	DMGDH (ENSCLMG00005010089) #37	bhmt (ENSCLMG00005010092)	JMY (ENSCLMG00005010111)	HOMER1 (ENSCLMG00005010119)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Channel bull blenny	MODERN SPECIES	3	cops4 (ENSCGOG00000015563)	plac8.1 (ENSCGOG00000015587)	ADAMTS6 (ENSCGOG00000015595)	cwc27 (ENSCGOG00000015627)	ppwd1 (ENSCGOG00000015933)	trim23 (ENSCGOG00000016037)	mzt2b (ENSCGOG00000016240)	lhx5 (ENSCGOG00000016241)	GCNT4 (ENSCGOG00000016250) #10	hmgcrb (ENSCGOG00000016256) #12	CERT1 (ENSCGOG00000016569) #13	SV2C (ENSCGOG00000017410) #18	ENSCGOG00000017878 #19	f2r2.1 (ENSCGOG00000017879) #21	f2rl1.1 (ENSCGOG00000017880) #22	f2rl1.2 (ENSCGOG00000017882) #22	s100z (ENSCGOG00000017887) #23	crhbp (ENSCGOG00000017890) #24	PDE8B (ENSCGOG00000017917) #27	wdr41 (ENSCGOG00000018568) #28	otpa (ENSCGOG00000018661) #29	tbca (ENSCGOG00000018671) #30	AP3B1 (ENSCGOG00000018679) #31	scamp1 (ENSCGOG00000018847) #33	lhfpl2a (ENSCGOG00000018856) #34	ARSB (ENSCGOG00000018860) #36	DMGDH (ENSCGOG00000018919) #37	bhmt (ENSCGOG00000019370)	JMY (ENSCGOG00000019494)	ENSCGOG00000019503	HOMER1 (ENSCGOG00000019507)
Pike perch	MODERN SPECIES	33	ADAMTS6 (ENSSLUG00000016185)	cwc27 (ENSSLUG00000016168)	ppwd1 (ENSSLUG00000016134)	trim23 (ENSSLUG00000015714)	mzt2b (ENSSLUG00000015678)	lhx5 (ENSSLUG00000015671)	GCNT4 (ENSSLUG00000015667) #10	hmgcrb (ENSSLUG00000014926) #12	CERT1 (ENSSLUG00000012625) #13	SV2C (ENSSLUG00000012183) #18	F2RL2 (ENSSLUG00000012168) #19	f2r2.1 (ENSSLUG00000012165) #21	f2rl1.1 (ENSSLUG00000012162) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.2 (ENSSLUG00000012151) #22	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144) #23	crhbp (ENSSLUG00000012137) #24	PDE8B (ENSSLUG00000012130) #27	wdr41 (ENSSLUG00000011958) #28	otpa (ENSSLUG00000011935) #29	tbca (ENSSLUG00000011926) #30	AP3B1 (ENSSLUG00000011801) #31	scamp1 (ENSSLUG00000011766) #33	lhfpl2a (ENSSLUG00000011761) #34	ARSB (ENSSLUG00000011744) #36	DMGDH (ENSSLUG00000011623) #37	bhmt (ENSSLUG00000011582)	JMY (ENSSLUG00000011567)	HOMER1 (ENSSLUG00000011333)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Turbot	MODERN SPECIES	16	COPS4 (ENSSMAG00000009906)	plac8.1 (ENSSMAG00000028205)	ENSSMAG00000009966	ENSSMAG00000010093	ENSSMAG00000010108	ENSSMAG00000010139	mzt2b (ENSSMAG00000010171)	ENSSMAG00000035108	hmgcrb (ENSSMAG00000010211) #12	GCNT4 (ENSSMAG00000010203) #10	ENSSMAG00000010255 #13	SV2C (ENSSMAG00000010339) #18	F2RL2 (ENSSMAG00000024561) #19	f2r2.1 (ENSSMAG00000030722) #21	f2rl1.1 (ENSSMAG00000010383) #22	f2rl1.2 (ENSSMAG00000027655) #22	ch25hl2 (ENSSMAG00000010398)	s100z (ENSSMAG00000024918) #23	crhbp (ENSSMAG00000010424) #24	PDE8B (ENSSMAG00000010435) #27	wdr41 (ENSSMAG00000010452) #28	otpa (ENSSMAG00000026303) #29	tbca (ENSSMAG00000010486) #30	AP3B1 (ENSSMAG00000010503) #31	SCAMP1 (ENSSMAG00000010527) #33	ENSSMAG00000026772	LHFPL2 (ENSSMAG00000010559) #34	ARSB (ENSSMAG00000010569) #36	DMGDH (ENSSMAG00000010584) #37	bhmt (ENSSMAG00000010622)	JMY (ENSSMAG00000010657)
Tongue sole	MODERN SPECIES	5	cops4 (ENSCSEG00000011083)	plac8.1 (ENSCSEG00000011107)	ADAMTS6 (ENSCSEG00000011127)	cwc27 (ENSCSEG00000011251)	ppwd1 (ENSCSEG00000011265)	trim23 (ENSCSEG00000011286)	mzt2b (ENSCSEG00000011312)	lhx5 (ENSCSEG00000011321)	GCNT4 (ENSCSEG00000011334) #10	hmgcrb (ENSCSEG00000011342) #12	CERT1 (ENSCSEG00000011385) #13	SV2C (ENSCSEG00000011413) #18	F2RL2 (ENSCSEG00000011425) #19	f2r2.1 (ENSCSEG00000011427) #21	f2rl1.1 (ENSCSEG00000011434) #22	f2rl1.2 (ENSCSEG00000011438) #22	ch25hl2 (ENSCSEG00000011443)	s100z (ENSCSEG00000011450) #23	slc27a6 (ENSCSEG00000011454)	ENSCSEG00000011463	SEZ6L (ENSCSEG00000011474)	ENSCSEG00000011496	grk3 (ENSCSEG00000011551)	cryba4 (ENSCSEG00000011585)	crybb1 (ENSCSEG00000011597)	acads (ENSCSEG00000011604)	ENSCSEG00000011625	ENSCSEG00000011631	ENSCSEG00000011639	ENSCSEG00000011660	PURB (ENSCSEG00000011673)
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Seriola	ANCESTRAL SPECIES	53	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Greater amberjack	MODERN SPECIES	297														f2r2.1 (ENSSDUG00000023504) #21	f2rl1.1 (ENSSDUG00000023505) #22	f2rl1.2 (ENSSDUG00000023507) #22	ch25hl2 (ENSSDUG00000023510)	s100z (ENSSDUG00000023512) #23	crhbp (ENSSDUG00000023513) #24	PDE8B (ENSSDUG00000023518) #27
Yellowtail amberjack	MODERN SPECIES	3042	cops4 (ENSSLDG00000013604)	plac8.1 (ENSSLDG00000013652)	ADAMTS6 (ENSSLDG00000013672)	cwc27 (ENSSLDG00000013750)	ppwd1 (ENSSLDG00000013794)	trim23 (ENSSLDG00000013815)	mzt2b (ENSSLDG00000013865)	lhx5 (ENSSLDG00000013882)	GCNT4 (ENSSLDG00000013894) #10	hmgcrb (ENSSLDG00000013913) #12	CERT1 (ENSSLDG00000013970) #13	SV2C (ENSSLDG00000014039) #18	F2RL2 (ENSSLDG00000014063) #19	f2r2.1 (ENSSLDG00000014072) #21	f2rl1.1 (ENSSLDG00000014079) #22	f2rl1.2 (ENSSLDG00000014088) #22	ch25hl2 (ENSSLDG00000014097)	s100z (ENSSLDG00000014112) #23	crhbp (ENSSLDG00000014122) #24	PDE8B (ENSSLDG00000014147) #27	wdr41 (ENSSLDG00000014187) #28	otpa (ENSSLDG00000014245) #29	tbca (ENSSLDG00000014269) #30	AP3B1 (ENSSLDG00000014297) #31	scamp1 (ENSSLDG00000014368) #33	lhfpl2a (ENSSLDG00000014391) #34	ARSB (ENSSLDG00000014410) #36	DMGDH (ENSSLDG00000014440) #37	bhmt (ENSSLDG00000014491)	JMY (ENSSLDG00000014512)	HOMER1 (ENSSLDG00000014538)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	34	cops4 (ENSLCAG00010004238)	PLAC8 (ENSLCAG00010004226)	ADAMTS6 (ENSLCAG00010004119)	cwc27 (ENSLCAG00010004089)	ppwd1 (ENSLCAG00010004059)	trim23 (ENSLCAG00010004039)	mzt2b (ENSLCAG00010004024)	lhx5 (ENSLCAG00010004021)	GCNT4 (ENSLCAG00010004017) #10	hmgcrb (ENSLCAG00010003972) #12	CERT1 (ENSLCAG00010003603) #13	SV2C (ENSLCAG00010003544) #18	F2RL2 (ENSLCAG00010003542) #19	f2r2.1 (ENSLCAG00010003537) #21	f2rl1.1 (ENSLCAG00010003533) #22	f2rl1.2 (ENSLCAG00010003531) #22	ch25hl2 (ENSLCAG00010003527)	ENSLCAG00010003294	cyb5r3 (ENSLCAG00010003205)	syt1a (ENSLCAG00010003197)	pawr (ENSLCAG00010003184)	ppp1r12a (ENSLCAG00010003115)	rps16 (ENSLCAG00010003081)	myf6 (ENSLCAG00010003076)	myf5 (ENSLCAG00010003070)	lin7a (ENSLCAG00010003066)	ACSS3 (ENSLCAG00010003060)
Barramundi perch	MODERN SPECIES	1250																f2rl1.2 (ENSLCAG00010002543) #22	ch25hl2 (ENSLCAG00010002538)	s100z (ENSLCAG00010002535) #23
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c	ENSGT00940000156354.p
Climbing perch	MODERN SPECIES	3	plac8.1 (ENSATEG00000026599)	ENSATEG00000007479	ENSATEG00000007557	ENSATEG00000007567	ENSATEG00000007627	mzt2b (ENSATEG00000007666)	ENSATEG00000007676	GCNT4 (ENSATEG00000007693) #10	GCNT4 (ENSATEG00000007703) #10	ENSATEG00000007723 #12	CERT1 (ENSATEG00000007810) #13	SV2C (ENSATEG00000007944) #18	F2RL2 (ENSATEG00000007994) #19	f2r2.1 (ENSATEG00000029426) #21	f2rl1.1 (ENSATEG00000026082) #22	f2rl1.2 (ENSATEG00000008020) #22	ch25hl2 (ENSATEG00000008028)	s100z (ENSATEG00000008043) #23	crhbp (ENSATEG00000008060) #24	PDE8B (ENSATEG00000008314) #27	wdr41 (ENSATEG00000008464) #28	otpa (ENSATEG00000008473) #29	tbca (ENSATEG00000008490) #30	AP3B1 (ENSATEG00000008505) #31	SCAMP1 (ENSATEG00000008541) #33	LHFPL2 (ENSATEG00000008588) #34	ARSB (ENSATEG00000008598) #36	DMGDH (ENSATEG00000008607) #37	bhmt (ENSATEG00000008673)	JMY (ENSATEG00000008706)	HOMER1 (ENSATEG00000008778)
Siamese fighting fish	MODERN SPECIES	3	mzt2b (ENSBSLG00000009665)	lhx5 (ENSBSLG00000009656)	GCNT4 (ENSBSLG00000009653) #10	GCNT4 (ENSBSLG00000009651) #10	GCNT4 (ENSBSLG00000009647) #10	GCNT4 (ENSBSLG00000009643) #10	ENSBSLG00000009637 #10	GCNT4 (ENSBSLG00000009603) #10	GCNT4 (ENSBSLG00000009600) #10	GCNT4 (ENSBSLG00000009596) #10	hmgcrb (ENSBSLG00000009538) #12	CERT1 (ENSBSLG00000008877) #13	SV2C (ENSBSLG00000008749) #18	f2r2.1 (ENSBSLG00000008727) #21	f2rl1.1 (ENSBSLG00000008723) #22	f2rl1.2 (ENSBSLG00000008716) #22	ch25hl2 (ENSBSLG00000008714)	s100z (ENSBSLG00000008710) #23	crhbp (ENSBSLG00000008673) #24	PDE8B (ENSBSLG00000007946) #27	wdr41 (ENSBSLG00000007776) #28	otpa (ENSBSLG00000007751) #29	tbca (ENSBSLG00000007725) #30	AP3B1 (ENSBSLG00000006839) #31	scamp1 (ENSBSLG00000006367) #33	lhfpl2a (ENSBSLG00000005975) #34	DMGDH (ENSBSLG00000005714) #37	bhmt (ENSBSLG00000005481)	JMY (ENSBSLG00000005382)	ENSBSLG00000005349	HOMER1 (ENSBSLG00000005153)
Zig-zag eel	MODERN SPECIES	3	COPS4 (ENSMAMG00000004815)	plac8.1 (ENSMAMG00000004799)	ENSMAMG00000004760	ENSMAMG00000004661	ENSMAMG00000004609	ENSMAMG00000004557	mzt2b (ENSMAMG00000004537)	ENSMAMG00000004519	GCNT4 (ENSMAMG00000004514) #10	ENSMAMG00000004461 #12	CERT1 (ENSMAMG00000004370) #13	SV2C (ENSMAMG00000004324) #18	F2RL2 (ENSMAMG00000004316) #19	f2r2.1 (ENSMAMG00000027882) #21	f2rl1.1 (ENSMAMG00000004308) #22	f2rl1.2 (ENSMAMG00000004294) #22	ch25hl2 (ENSMAMG00000004284)	s100z (ENSMAMG00000004265) #23	crhbp (ENSMAMG00000004254) #24	PDE8B (ENSMAMG00000004204) #27	wdr41 (ENSMAMG00000004169) #28	otpa (ENSMAMG00000004156) #29	tbca (ENSMAMG00000004128) #30	AP3B1 (ENSMAMG00000004074) #31	SCAMP1 (ENSMAMG00000004014) #33	LHFPL2 (ENSMAMG00000003982) #34	ARSB (ENSMAMG00000003940) #36	DMGDH (ENSMAMG00000003893) #37	bhmt (ENSMAMG00000003856)	JMY (ENSMAMG00000003843)	HOMER1 (ENSMAMG00000024864)
Pinecone sodierfish	MODERN SPECIES	3	ENSMMDG00005003389	plac8.1 (ENSMMDG00005003391)	ADAMTS6 (ENSMMDG00005003397)	cwc27 (ENSMMDG00005003407)	ppwd1 (ENSMMDG00005003414)	trim23 (ENSMMDG00005003417)	mzt2b (ENSMMDG00005004523)	lhx5 (ENSMMDG00005004528)	GCNT4 (ENSMMDG00005004536) #10	hmgcrb (ENSMMDG00005004551) #12	CERT1 (ENSMMDG00005004619) #13	SV2C (ENSMMDG00005004990) #18	F2RL2 (ENSMMDG00005005395) #19	f2r2.1 (ENSMMDG00005005400) #21	f2rl1.1 (ENSMMDG00005005405) #22	f2rl1.2 (ENSMMDG00005005408) #22	ch25hl2 (ENSMMDG00005005410)	s100z (ENSMMDG00005005417) #23	crhbp (ENSMMDG00005005426) #24	PDE8B (ENSMMDG00005005550) #27	wdr41 (ENSMMDG00005005908) #28	otpa (ENSMMDG00005005938) #29	tbca (ENSMMDG00005005944) #30	AP3B1 (ENSMMDG00005005969) #31	scamp1 (ENSMMDG00005006270) #33	lhfpl2a (ENSMMDG00005006275) #34	ARSB (ENSMMDG00005006283) #36	DMGDH (ENSMMDG00005006293) #37	bhmt (ENSMMDG00005006373)	bhmt (ENSMMDG00005006407)	JMY (ENSMMDG00005006450)
Cod	MODERN SPECIES	17	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36	DMGDH (ENSGMOG00000008408) #37	bhmt (ENSGMOG00000008411)	JMY (ENSGMOG00000034971)	HOMER1 (ENSGMOG00000008419)	ENSGMOG00000028315
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00990000205556	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00390000013484.g	ENSGT00980000198836	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h	ENSGT00940000156354.p.a
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h	ENSGT00940000156354.p.a
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h	ENSGT00940000156354.p.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.gb #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37	ENSGT00390000003122.a.a.a.f	ENSGT00510000046704.b.a.c.h	ENSGT00940000156354.p.a.a
Coho salmon	MODERN SPECIES	15	ENSOKIG00005017904	rnf224 (ENSOKIG00005017908)	ENSOKIG00005017918	slc31a1 (ENSOKIG00005017953)	cdc26 (ENSOKIG00005017973)	atp6v1g1 (ENSOKIG00005017977)	hmgcrb (ENSOKIG00005018005) #12	CERT1 (ENSOKIG00005018187) #13	ENSOKIG00005018354	SV2C (ENSOKIG00005018365) #18	ENSOKIG00005018429	F2RL2 (ENSOKIG00005018438) #19	F2R (ENSOKIG00005018463) #21	f2rl1.1 (ENSOKIG00005018471) #22	f2rl1.1 (ENSOKIG00005018474) #22	f2rl1.2 (ENSOKIG00005018486) #22	ch25hl2 (ENSOKIG00005018528)	s100z (ENSOKIG00005018551) #23	crhbp (ENSOKIG00005018561) #24	aggf1 (ENSOKIG00005018578) #25	PDE8B (ENSOKIG00005018615) #27	wdr41 (ENSOKIG00005018890) #28	otpa (ENSOKIG00005018943) #29	tbca (ENSOKIG00005018976) #30	AP3B1 (ENSOKIG00005019349) #31	SCAMP1 (ENSOKIG00005026634) #33	lhfpl2a (ENSOKIG00005026687) #34	ENSOKIG00005026697	DMGDH (ENSOKIG00005026761) #37	bhmt (ENSOKIG00005027395)	JMY (ENSOKIG00005027562)
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005001972	rnf224 (ENSOTSG00005001971)	ENSOTSG00005001969	prpf4 (ENSOTSG00005001967)	cdc26 (ENSOTSG00005001966)	slc31a1 (ENSOTSG00005001964)	atp6v1g1 (ENSOTSG00005001785)	hmgcrb (ENSOTSG00005036211) #12	CERT1 (ENSOTSG00005035862) #13	ENSOTSG00005035858	SV2C (ENSOTSG00005035394) #18	F2RL2 (ENSOTSG00005035390) #19	F2R (ENSOTSG00005035389) #21	f2rl1.1 (ENSOTSG00005035388) #22	f2rl1.1 (ENSOTSG00005035387) #22	f2rl1.2 (ENSOTSG00005035386) #22	ch25hl2 (ENSOTSG00005035385)	s100z (ENSOTSG00005035384) #23	crhbp (ENSOTSG00005035382) #24	aggf1 (ENSOTSG00005035381) #25	PDE8B (ENSOTSG00005035380) #27	wdr41 (ENSOTSG00005035379) #28	otpa (ENSOTSG00005035378) #29	tbca (ENSOTSG00005035356) #30	ENSOTSG00005035353	DMGDH (ENSOTSG00005033116) #37	bhmt (ENSOTSG00005032687)	JMY (ENSOTSG00005032667)	HOMER1 (ENSOTSG00005032662)	DTWD2 (ENSOTSG00005032660)	tia1 (ENSOTSG00005032437)
Huchen	MODERN SPECIES	356											ENSHHUG00000004886	F2RL2 (ENSHHUG00000004882) #19	F2R (ENSHHUG00000004876) #21	f2rl1.1 (ENSHHUG00000004874) #22	f2rl1.1 (ENSHHUG00000004873) #22	f2rl1.2 (ENSHHUG00000004795) #22	ch25hl2 (ENSHHUG00000004780)	s100z (ENSHHUG00000004773) #23	crhbp (ENSHHUG00000004761) #24	aggf1 (ENSHHUG00000004753) #25	PDE8B (ENSHHUG00000004183) #27	wdr41 (ENSHHUG00000004143) #28	otpa (ENSHHUG00000004114) #29	tbca (ENSHHUG00000004085) #30	AP3B1 (ENSHHUG00000003988) #31	scamp1 (ENSHHUG00000003948) #33	lhfpl2a (ENSHHUG00000003940) #34	bhmt (ENSHHUG00000003824)	DMGDH (ENSHHUG00000003757) #37	JMY (ENSHHUG00000003684)	HOMER1 (ENSHHUG00000003679)
Northern pike	MODERN SPECIES	13	ENSELUG00000007577	ENSELUG00000007569	pisd (ENSELUG00000007552)	ENSELUG00000007530	rnf224 (ENSELUG00000007522)	cdc26 (ENSELUG00000007352)	prpf4 (ENSELUG00000007510)	atp6v1g1 (ENSELUG00000034652)	hmgcrb (ENSELUG00000007320) #12	CERT1 (ENSELUG00000007230) #13	SV2C (ENSELUG00000007129) #18	F2RL2 (ENSELUG00000007103) #19	f2rl1.1 (ENSELUG00000007001) #22	f2r2.1 (ENSELUG00000007082) #21	f2rl1.1 (ENSELUG00000006993) #22	f2rl1.2 (ENSELUG00000006989) #22	ch25hl2 (ENSELUG00000006977)	s100z (ENSELUG00000006972) #23	crhbp (ENSELUG00000006962) #24	aggf1 (ENSELUG00000000226) #25	PDE8B (ENSELUG00000006875) #27	wdr41 (ENSELUG00000006803) #28	otpa (ENSELUG00000006749) #29	tbca (ENSELUG00000006728) #30	AP3B1 (ENSELUG00000006692) #31	scamp1 (ENSELUG00000006644) #33	lhfpl2a (ENSELUG00000006588) #34	ARSB (ENSELUG00000006567) #36	bhmt (ENSELUG00000006487)	DMGDH (ENSELUG00000006530) #37	JMY (ENSELUG00000006465)
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a	ENSGT00510000046704.b.a.c
Salmoninae	ANCESTRAL SPECIES	573		ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37	ENSGT00390000003122.a.a.a.e	ENSGT00510000046704.b.a.c.g
Salmo	ANCESTRAL SPECIES	1	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.b #30	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37	ENSGT00390000003122.a.a.a.e
River trout	MODERN SPECIES	3	ENSSTUG00000013159	pisd (ENSSTUG00000013140)	ENSSTUG00000013135	rnf224 (ENSSTUG00000013121)	prpf4 (ENSSTUG00000012837)	cdc26 (ENSSTUG00000012816)	slc31a1 (ENSSTUG00000012802)	atp6v1g1 (ENSSTUG00000012790)	CERT1 (ENSSTUG00000010713) #13	ENSSTUG00000010643	ENSSTUG00000010636	SV2C (ENSSTUG00000010522) #18	F2RL2 (ENSSTUG00000010510) #19	F2R (ENSSTUG00000010507) #21	f2rl1.1 (ENSSTUG00000010502) #22	f2rl1.2 (ENSSTUG00000010495) #22	ch25hl2 (ENSSTUG00000010489)	s100z (ENSSTUG00000010478) #23	crhbp (ENSSTUG00000010464) #24	aggf1 (ENSSTUG00000010412) #25	PDE8B (ENSSTUG00000010269) #27	ENSSTUG00000010259	otpa (ENSSTUG00000010242) #29	tbca (ENSSTUG00000010231) #30	AP3B1 (ENSSTUG00000007196) #31	ENSSTUG00000007106	scamp1 (ENSSTUG00000007065) #33	lhfpl2a (ENSSTUG00000007040) #34	ARSB (ENSSTUG00000007026) #36	bhmt (ENSSTUG00000006978)	JMY (ENSSTUG00000006925)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000096934	ENSSSAG00000084204	pisd (ENSSSAG00000105002)	rnf224 (ENSSSAG00000089994)	prpf4 (ENSSSAG00000014066)	cdc26 (ENSSSAG00000087152)	ENSSSAG00000121570	slc31a1 (ENSSSAG00000097858)	VATG1 (ENSSSAG00000078764)	ENSSSAG00000078152 #13	ENSSSAG00000101380	ENSSSAG00000078276	SV2C (ENSSSAG00000077524) #18	F2RL2 (ENSSSAG00000077494) #19	F2R (ENSSSAG00000089851) #21	par2 (ENSSSAG00000077482) #22	ch25hl2 (ENSSSAG00000113693)	s100z (ENSSSAG00000112998) #23	crhbp (ENSSSAG00000077468) #24	aggf1 (ENSSSAG00000077434) #25	PDE8B (ENSSSAG00000078477) #27	ENSSSAG00000089049	otpa (ENSSSAG00000100514) #29	tbca (ENSSSAG00000077412) #30	ENSSSAG00000091845	AP3B1 (ENSSSAG00000076252) #31	ENSSSAG00000099787	SCAMP1 (ENSSSAG00000076200) #33	LHFPL2 (ENSSSAG00000076195) #34	arsb (ENSSSAG00000076193) #36	DMGDH (ENSSSAG00000076180) #37
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.a.a #30	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37	ENSGT00390000003122.a.a.a.e
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000069015	ENSOMYG00000032993	ENSOMYG00000032928	rnf224 (ENSOMYG00000032924)	prpf4 (ENSOMYG00000032829)	cdc26 (ENSOMYG00000075708)	slc31a1 (ENSOMYG00000032732)	atp6v1g1 (ENSOMYG00000032720)	ENSOMYG00000032608 #13	ENSOMYG00000056356	ENSOMYG00000032540	SV2C (ENSOMYG00000060958) #18	F2RL2 (ENSOMYG00000032523) #19	ENSOMYG00000062425	F2R (ENSOMYG00000003544) #21	f2rl1.2 (ENSOMYG00000032514) #22	ch25hl2 (ENSOMYG00000032508)	s100z (ENSOMYG00000032501) #23	crf-bp (ENSOMYG00000071371) #24	aggf1 (ENSOMYG00000032485) #25	PDE8B (ENSOMYG00000032379) #27	otpa (ENSOMYG00000032321) #29	tbca (ENSOMYG00000050741) #30	ENSOMYG00000060792	AP3B1 (ENSOMYG00000030926) #31	SCAMP1 (ENSOMYG00000023337) #33	ENSOMYG00000030518	LHFPL2 (ENSOMYG00000030501) #34	ARSB (ENSOMYG00000030463) #36	DMGDH (ENSOMYG00000030429) #37	ENSOMYG00000069246
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00390000012355.A.a.a.b	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00390000003122.a.a.a.e	ENSGT00510000046704.b.a.c.g	ENSGT00940000156354.p.b
Chinook salmon	MODERN SPECIES	26	ANKRD34B (ENSOTSG00005011252)	ENSOTSG00005011253	ENSOTSG00005011254	pisd (ENSOTSG00005011257)	ENSOTSG00005011259	rnf224 (ENSOTSG00005011260)	prpf4 (ENSOTSG00005011262)	cdc26 (ENSOTSG00005011403)	slc31a1 (ENSOTSG00005011404)	atp6v1g1 (ENSOTSG00005011405)	CERT1 (ENSOTSG00005011406) #13	ENSOTSG00005011626	SV2C (ENSOTSG00005011627) #18	F2RL2 (ENSOTSG00005011629) #19	F2R (ENSOTSG00005011630) #21	f2rl1.2 (ENSOTSG00005011631) #22	ch25hl2 (ENSOTSG00005011632)	crhbp (ENSOTSG00005011633) #24	aggf1 (ENSOTSG00005011635) #25	PDE8B (ENSOTSG00005011643) #27	otpa (ENSOTSG00005011703) #29	tbca (ENSOTSG00005011704) #30	AP3B1 (ENSOTSG00005011705) #31	scamp1 (ENSOTSG00005011965) #33	ENSOTSG00005011967	lhfpl2a (ENSOTSG00005011968) #34	ARSB (ENSOTSG00005011970) #36	bhmt (ENSOTSG00005011972)	JMY (ENSOTSG00005012074)	HOMER1 (ENSOTSG00005012085)	ENSOTSG00005012183
Coho salmon	MODERN SPECIES	21	ANKRD34B (ENSOKIG00005048256)	ENSOKIG00005048261	ENSOKIG00005048264	PISD (ENSOKIG00005048274)	ENSOKIG00005048284	rnf224 (ENSOKIG00005048285)	prpf4 (ENSOKIG00005048306)	cdc26 (ENSOKIG00005048436)	slc31a1 (ENSOKIG00005048447)	atp6v1g1 (ENSOKIG00005048457)	CERT1 (ENSOKIG00005048556) #13	ENSOKIG00005049142	SV2C (ENSOKIG00005049163) #18	F2RL2 (ENSOKIG00005049244) #19	F2R (ENSOKIG00005049246) #21	f2rl1.2 (ENSOKIG00005049249) #22	ch25hl2 (ENSOKIG00005049253)	s100z (ENSOKIG00005049257) #23	crhbp (ENSOKIG00005049260) #24	aggf1 (ENSOKIG00005049268) #25	PDE8B (ENSOKIG00005049318) #27	ENSOKIG00005049404	otpa (ENSOKIG00005049408) #29	tbca (ENSOKIG00005049413) #30	AP3B1 (ENSOKIG00005049495) #31	scamp1 (ENSOKIG00005049660) #33	ENSOKIG00005049665	LHFPL2 (ENSOKIG00005049668) #34	ENSOKIG00005049671	ARSB (ENSOKIG00005038211) #36	bhmt (ENSOKIG00005039211)
Huchen	MODERN SPECIES	1611	pisd (ENSHHUG00000041519)	rnf224 (ENSHHUG00000041534)	prpf4 (ENSHHUG00000041542)	cdc26 (ENSHHUG00000041614)	slc31a1 (ENSHHUG00000041620)	atp6v1g1 (ENSHHUG00000041631)	ENSHHUG00000041646 ##13	CERT1 (ENSHHUG00000041649) #13	ENSHHUG00000041658 #13	ENSHHUG00000041664	ENSHHUG00000041670	SV2C (ENSHHUG00000041673) #18	F2RL2 (ENSHHUG00000041712) #19	F2R (ENSHHUG00000041713) #21	f2rl1.1 (ENSHHUG00000041720) #22	f2rl1.2 (ENSHHUG00000041732) #22	ch25hl2 (ENSHHUG00000041737)	s100z (ENSHHUG00000041742) #23
Osteoglossiformes	ANCESTRAL SPECIES	39	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a.g #9	ENSGT00940000159721.f #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00950000182940.b.b.g #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.g #21	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000159952.a.a #29
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	2	hexb (ENSPKIG00000018938)	gfm2 (ENSPKIG00000018878)	nsa2 (ENSPKIG00000018852) #7	FAM169A (ENSPKIG00000018819) #9	GCNT4 (ENSPKIG00000018802) #10	hmgcra (ENSPKIG00000018702) #12	ENSPKIG00000018585 #13	ENSPKIG00000018516	ENSPKIG00000018484	SV2C (ENSPKIG00000018429) #18	F2RL2 (ENSPKIG00000018396) #19	F2R (ENSPKIG00000018365) #21	f2rl1.2 (ENSPKIG00000018335) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.2 (ENSPKIG00000018301) #22	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247) #23	crhbp (ENSPKIG00000018218) #24	aggf1 (ENSPKIG00000018193) #25	PDE8B (ENSPKIG00000018112) #27	wdr41 (ENSPKIG00000018046) #28	otpa (ENSPKIG00000018024) #29	tbca (ENSPKIG00000018004) #30	AP3B1 (ENSPKIG00000017939) #31	SCAMP1 (ENSPKIG00000017903) #33	lhfpl2a (ENSPKIG00000017855) #34	ARSB (ENSPKIG00000017800) #36	DMGDH (ENSPKIG00000017764) #37	bhmt (ENSPKIG00000017692)
P. kingsleyae	MODERN SPECIES	2	utp15 (ENSPKIG00000019386)	ARHGEF28 (ENSPKIG00000019115)	ENC1 (ENSPKIG00000019024)	hexb (ENSPKIG00000018938)	gfm2 (ENSPKIG00000018878)	nsa2 (ENSPKIG00000018852) #7	FAM169A (ENSPKIG00000018819) #9	GCNT4 (ENSPKIG00000018802) #10	hmgcra (ENSPKIG00000018702) #12	ENSPKIG00000018585 #13	ENSPKIG00000018516	ENSPKIG00000018484	SV2C (ENSPKIG00000018429) #18	F2RL2 (ENSPKIG00000018396) #19	F2R (ENSPKIG00000018365) #21	f2rl1.2 (ENSPKIG00000018335) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.2 (ENSPKIG00000018301) #22	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247) #23	crhbp (ENSPKIG00000018218) #24	aggf1 (ENSPKIG00000018193) #25	PDE8B (ENSPKIG00000018112) #27	wdr41 (ENSPKIG00000018046) #28	otpa (ENSPKIG00000018024) #29	tbca (ENSPKIG00000018004) #30	AP3B1 (ENSPKIG00000017939) #31	SCAMP1 (ENSPKIG00000017903) #33	lhfpl2a (ENSPKIG00000017855) #34
P. kingsleyae	MODERN SPECIES	548												sv2ca (ENSPKIG00000011027) #18	iqgap2 (ENSPKIG00000011077) ##20	ENSPKIG00000011129	f2r (ENSPKIG00000011142) #21	f2rl1.2 (ENSPKIG00000011155) #22	OTP (ENSPKIG00000011167) #29
Asian bonytongue	MODERN SPECIES	8	ENSSFOG00015032902	ptger4a (ENSSFOG00015027210)	MAP1B (ENSSFOG00015023262)	mrps27 (ENSSFOG00015023271)	btf3 (ENSSFOG00015031532)	ENC1 (ENSSFOG00015031976)	ENSSFOG00015030378 #9	GCNT4 (ENSSFOG00015023290) #10	ENSSFOG00015030013	CERT1 (ENSSFOG00015023300) #13	POLK (ENSSFOG00015023341) #14	ANKDD1B (ENSSFOG00015023354) #15	sv2ca (ENSSFOG00015023367) #18	iqgap2 (ENSSFOG00015023423) ##20	f2r (ENSSFOG00015023476) #21	f2rl1.2 (ENSSFOG00015033232) #22	otpb (ENSSFOG00015023483) #29	scamp1 (ENSSFOG00015005381) #33	LHFPL2 (ENSSFOG00015005391) #34	JMY (ENSSFOG00015005414)	homer1b (ENSSFOG00015005422)	cmya5 (ENSSFOG00015005457)	mtx3 (ENSSFOG00015005510)	thbs4a (ENSSFOG00015005554)	serinc5 (ENSSFOG00015005644)	cdk7 (ENSSFOG00015005692)	SETBP1 (ENSSFOG00015005729)	slc14a2 (ENSSFOG00015005736)	ccdc65 (ENSSFOG00015005750)	lnpep (ENSSFOG00015005868)	ERAP2 (ENSSFOG00015005906)
Elephant shark	MODERN SPECIES	1625	gcnt4a (ENSCMIG00000018065) #10	ENSCMIG00000018068	ENSCMIG00000018072	hmgcra (ENSCMIG00000000216) #12	CERT1 (ENSCMIG00000000500) #13	ENSCMIG00000000697 #14	ENSCMIG00000000705 #14	ENSCMIG00000000718 #14	ENSCMIG00000000736 #15	ENSCMIG00000000756	sv2ca (ENSCMIG00000000779) #18	ENSCMIG00000000914 ##20	F2RL2 (ENSCMIG00000001290) #19	F2R (ENSCMIG00000001296) #21	ENSCMIG00000001298 #21	f2rl1.1 (ENSCMIG00000001302) #22	ENSCMIG00000001311	ch25hl2 (ENSCMIG00000001313)	s100z (ENSCMIG00000001333) #23	crhbp (ENSCMIG00000001390) #24	aggf1 (ENSCMIG00000001406) #25	ENSCMIG00000001456	ENSCMIG00000001540 #27	wdr41 (ENSCMIG00000001693) #28	otpa (ENSCMIG00000001871) #29	tbca (ENSCMIG00000001877) #30
Gnathostomata	ANCESTRAL SPECIES	58	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.a.b.b.a.b ##20	ENSGT00950000183076.a.a ##20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1625	nsa2 (ENSCMIG00000018058) #7	ENSCMIG00000018062 #9	gcnt4a (ENSCMIG00000018065) #10	ENSCMIG00000018068	ENSCMIG00000018072	hmgcra (ENSCMIG00000000216) #12	CERT1 (ENSCMIG00000000500) #13	ENSCMIG00000000697 #14	ENSCMIG00000000705 #14	ENSCMIG00000000718 #14	ENSCMIG00000000736 #15	ENSCMIG00000000756	sv2ca (ENSCMIG00000000779) #18	ENSCMIG00000000914 ##20	F2RL2 (ENSCMIG00000001290) #19	F2R (ENSCMIG00000001296) #21	ENSCMIG00000001298 #21	f2rl1.1 (ENSCMIG00000001302) #22	ENSCMIG00000001311	ch25hl2 (ENSCMIG00000001313)	s100z (ENSCMIG00000001333) #23	crhbp (ENSCMIG00000001390) #24	aggf1 (ENSCMIG00000001406) #25	ENSCMIG00000001456	ENSCMIG00000001540 #27	wdr41 (ENSCMIG00000001693) #28	otpa (ENSCMIG00000001871) #29	tbca (ENSCMIG00000001877) #30
Elephant shark	MODERN SPECIES	1625	ENSCMIG00000018062 #9	gcnt4a (ENSCMIG00000018065) #10	ENSCMIG00000018068	ENSCMIG00000018072	hmgcra (ENSCMIG00000000216) #12	CERT1 (ENSCMIG00000000500) #13	ENSCMIG00000000697 #14	ENSCMIG00000000705 #14	ENSCMIG00000000718 #14	ENSCMIG00000000736 #15	ENSCMIG00000000756	sv2ca (ENSCMIG00000000779) #18	ENSCMIG00000000914 ##20	F2RL2 (ENSCMIG00000001290) #19	F2R (ENSCMIG00000001296) #21	ENSCMIG00000001298 #21	f2rl1.1 (ENSCMIG00000001302) #22	ENSCMIG00000001311	ch25hl2 (ENSCMIG00000001313)	s100z (ENSCMIG00000001333) #23	crhbp (ENSCMIG00000001390) #24	aggf1 (ENSCMIG00000001406) #25	ENSCMIG00000001456	ENSCMIG00000001540 #27	wdr41 (ENSCMIG00000001693) #28	otpa (ENSCMIG00000001871) #29	tbca (ENSCMIG00000001877) #30
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Actinopterygii	ANCESTRAL SPECIES	45	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Neopterygii	ANCESTRAL SPECIES	26	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Spotted gar	DUPLICATION
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	658	ACOT12 (ENSLOCG00000005352)	gfm2 (ENSLOCG00000005368)	nsa2 (ENSLOCG00000005380) #7	FAM169A (ENSLOCG00000005396) #9	gcnt4a (ENSLOCG00000017524) #10	ENSLOCG00000005414 #11	hmgcra (ENSLOCG00000005433) #12	CERT1 (ENSLOCG00000005451) #13	POLK (ENSLOCG00000005477) #14	ANKDD1B (ENSLOCG00000005494) #15	ENSLOCG00000005510	sv2ca (ENSLOCG00000005520) #18	iqgap2 (ENSLOCG00000005540) ##20	F2RL2 (ENSLOCG00000017525) #19	F2R (ENSLOCG00000017526) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017528) #21	F2RL1 (ENSLOCG00000005575) #22	F2RL1 (ENSLOCG00000005593) #22	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654) #23	crhbp (ENSLOCG00000005670) #24	aggf1 (ENSLOCG00000005688) #25	PDE8B (ENSLOCG00000005705) #27	wdr41 (ENSLOCG00000005746) #28	otpa (ENSLOCG00000005761) #29	tbca (ENSLOCG00000005775) #30	AP3B1 (ENSLOCG00000005786) #31	scamp1 (ENSLOCG00000005808) #33	lhfpl2a (ENSLOCG00000005821) #34
Spotted gar	MODERN SPECIES	658	gfm2 (ENSLOCG00000005368)	nsa2 (ENSLOCG00000005380) #7	FAM169A (ENSLOCG00000005396) #9	gcnt4a (ENSLOCG00000017524) #10	ENSLOCG00000005414 #11	hmgcra (ENSLOCG00000005433) #12	CERT1 (ENSLOCG00000005451) #13	POLK (ENSLOCG00000005477) #14	ANKDD1B (ENSLOCG00000005494) #15	ENSLOCG00000005510	sv2ca (ENSLOCG00000005520) #18	iqgap2 (ENSLOCG00000005540) ##20	F2RL2 (ENSLOCG00000017525) #19	F2R (ENSLOCG00000017526) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017528) #21	F2RL1 (ENSLOCG00000005575) #22	F2RL1 (ENSLOCG00000005593) #22	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654) #23	crhbp (ENSLOCG00000005670) #24	aggf1 (ENSLOCG00000005688) #25	PDE8B (ENSLOCG00000005705) #27	wdr41 (ENSLOCG00000005746) #28	otpa (ENSLOCG00000005761) #29	tbca (ENSLOCG00000005775) #30	AP3B1 (ENSLOCG00000005786) #31	scamp1 (ENSLOCG00000005808) #33	lhfpl2a (ENSLOCG00000005821) #34	ARSB (ENSLOCG00000005844) #36
Spotted gar	MODERN SPECIES	658	zcchc9 (ENSLOCG00000005331)	ACOT12 (ENSLOCG00000005352)	gfm2 (ENSLOCG00000005368)	nsa2 (ENSLOCG00000005380) #7	FAM169A (ENSLOCG00000005396) #9	gcnt4a (ENSLOCG00000017524) #10	ENSLOCG00000005414 #11	hmgcra (ENSLOCG00000005433) #12	CERT1 (ENSLOCG00000005451) #13	POLK (ENSLOCG00000005477) #14	ANKDD1B (ENSLOCG00000005494) #15	ENSLOCG00000005510	sv2ca (ENSLOCG00000005520) #18	iqgap2 (ENSLOCG00000005540) ##20	F2RL2 (ENSLOCG00000017525) #19	F2R (ENSLOCG00000017526) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017528) #21	F2RL1 (ENSLOCG00000005575) #22	F2RL1 (ENSLOCG00000005593) #22	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654) #23	crhbp (ENSLOCG00000005670) #24	aggf1 (ENSLOCG00000005688) #25	PDE8B (ENSLOCG00000005705) #27	wdr41 (ENSLOCG00000005746) #28	otpa (ENSLOCG00000005761) #29	tbca (ENSLOCG00000005775) #30	AP3B1 (ENSLOCG00000005786) #31	scamp1 (ENSLOCG00000005808) #33
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	130	ENSGT00510000048902.a.e #9	ENSGT00940000159721.g #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305.b.a #12	ENSGT00940000155305.a #12	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544	ENSGT00940000156102.r	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b
Otomorpha	ANCESTRAL SPECIES	87									ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01100000263701
Clupeiformes	ANCESTRAL SPECIES	77	ENSGT00940000154578.B	ENSGT00950000183129.b.a	ENSGT00940000157749	ENSGT00390000007153.a.a.a	ENSGT00940000160263	ENSGT00940000155290.C	ENSGT00390000008802.a.a	ENSGT00440000033872	ENSGT00940000160028	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01040000240520	ENSGT00940000158711	ENSGT00940000159174.f
Denticle herring	MODERN SPECIES	2	si:dkey-3h3.3 (ENSDCDG00000023044)	parp8 (ENSDCDG00000022087)	ENSDCDG00000022019	golph3a (ENSDCDG00000022003)	mtmr12 (ENSDCDG00000021992)	zfr (ENSDCDG00000021959)	sub1b (ENSDCDG00000021943)	npr3 (ENSDCDG00000021941)	arid3c (ENSDCDG00000021935)	POLK (ENSDCDG00000021887) #14	ANKDD1B (ENSDCDG00000021873) #15	ENSDCDG00000021869	sv2ca (ENSDCDG00000021684) #18	F2RL2 (ENSDCDG00000021673) #19	iqgap2 (ENSDCDG00000007179) ##20	f2r (ENSDCDG00000005542) #21	fbp1a (ENSDCDG00000005541)	fbp2 (ENSDCDG00000005540)	ctsla (ENSDCDG00000005536)	dapk1 (ENSDCDG00000005122)	gas1a (ENSDCDG00000005053)	tars1 (ENSDCDG00000005042)	tars1 (ENSDCDG00000005031)	tars1 (ENSDCDG00000005012)	tars1 (ENSDCDG00000003540)	ENSDCDG00000003270	TMEM8B (ENSDCDG00000003254)	DAB2 (ENSDCDG00000003235)	CLIP1 (ENSDCDG00000003198)	ammecr1 (ENSDCDG00000003121)	dnaaf11 (ENSDCDG00000003084)
Atlantic herring	MODERN SPECIES	23	ITGA2 (ENSCHAG00000025526)	isl1a (ENSCHAG00000025508)	si:dkey-3h3.3 (ENSCHAG00000025504)	parp8 (ENSCHAG00000025125)	ENSCHAG00000025095	ENSCHAG00000025076	golph3a (ENSCHAG00000025069)	mtmr12 (ENSCHAG00000025052)	zfr (ENSCHAG00000025045)	sub1b (ENSCHAG00000025035)	ANKDD1B (ENSCHAG00000025028) #15	ENSCHAG00000025021	sv2ca (ENSCHAG00000024866) #18	F2RL2 (ENSCHAG00000024845) #19	iqgap2 (ENSCHAG00000017859) ##20	f2r (ENSCHAG00000017689) #21	ssbp2a (ENSCHAG00000017487)	ENSCHAG00000017446	ENSCHAG00000017416	ENSCHAG00000017404	ENSCHAG00000017394	zgc:110626 (ENSCHAG00000017380)	ENSCHAG00000017352	ENSCHAG00000017328	ENSCHAG00000017305	ENSCHAG00000017275	EDIL3 (ENSCHAG00000017117)	cox7c (ENSCHAG00000017092)	RASA1 (ENSCHAG00000015296)	ccnh (ENSCHAG00000015179)	tmem161b (ENSCHAG00000014729)
Otophysi	ANCESTRAL SPECIES	20									ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01100000263701	ENSGT00940000158711
Characiphysae	ANCESTRAL SPECIES	36	ENSGT00940000166675	ENSGT00940000153352.A	ENSGT00940000158491.a	ENSGT00940000166263	ENSGT00940000164944	ENSGT00940000166272	ENSGT00530000067979	ENSGT00940000157242.a.a	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01100000263701	ENSGT00940000158711
Channel catfish	MODERN SPECIES	14	Mccc2 (ENSIPUG00000012419)	hspb11 (ENSIPUG00000012526)	smn1 (ENSIPUG00000012580)	rtkn (ENSIPUG00000012641)	ENSIPUG00000012707	rhobtb4 (ENSIPUG00000012733)	wdr54 (ENSIPUG00000012842)	ENSIPUG00000012892	aqp3a (ENSIPUG00000012906)	polk (ENSIPUG00000012942) #14	Ankdd1b (ENSIPUG00000012979) #15	poc5 (ENSIPUG00000013008)	sv2c (ENSIPUG00000013042) #18	iqgap2 (ENSIPUG00000013096) ##20	F2RL2 (ENSIPUG00000013232) #19	f2r (ENSIPUG00000013239) #21	ssbp2 (ENSIPUG00000013265)	zgc:110626 (ENSIPUG00000013386)	ENSIPUG00000013411	vcan (ENSIPUG00000013420)	hapln1a (ENSIPUG00000013442)	EDIL3 (ENSIPUG00000013455)	COX7C (ENSIPUG00000013488)	rasa1 (ENSIPUG00000013511)	ccnh (ENSIPUG00000013612)	tmem161b (ENSIPUG00000013679)	mef2c (ENSIPUG00000013747)	MBLAC2 (ENSIPUG00000013810)	polr3g (ENSIPUG00000013820)	lysmd3 (ENSIPUG00000013836)	adgrv1 (ENSIPUG00000013862)
Characiphysae_b	ANCESTRAL SPECIES	9	ENSGT00940000166675	ENSGT00940000153352.A	ENSGT00940000158491.a	ENSGT00940000166263	ENSGT00940000164944	ENSGT00940000166272	ENSGT00530000067979	ENSGT00940000157242.a.a	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01100000263701	ENSGT00940000158711
Characoidei	ANCESTRAL SPECIES	35	ENSGT00940000155949	ENSGT00940000166675	ENSGT00940000153352.A	ENSGT00940000158491.a	ENSGT00940000166263	ENSGT00940000164944	ENSGT00940000166272	ENSGT00530000067979	ENSGT00940000157242.a.a	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000159267	ENSGT00940000158144.b	ENSGT00940000157492.a	ENSGT00940000157995	ENSGT00940000157876.c	ENSGT00940000160879	ENSGT00940000156031.f	ENSGT00940000159913.a.b	ENSGT00940000161769.b.b	ENSGT00940000158866	ENSGT00940000160516
Red-bellied piranha	MODERN SPECIES	39	mccc2 (ENSPNAG00000014077)	hspb11 (ENSPNAG00000014017)	smn1 (ENSPNAG00000014007)	rtkna (ENSPNAG00000002969)	ENSPNAG00000013772	rhobtb4 (ENSPNAG00000013715)	wdr54 (ENSPNAG00000002878)	ENSPNAG00000013661	aqp3a (ENSPNAG00000013653)	POLK (ENSPNAG00000013620) #14	ANKDD1B (ENSPNAG00000005016) #15	ENSPNAG00000002821	sv2ca (ENSPNAG00000013551) #18	iqgap2 (ENSPNAG00000002783) ##20	F2RL2 (ENSPNAG00000013416) #19	f2r (ENSPNAG00000013412) #21	ssbp2a (ENSPNAG00000013397)	zgc:110626 (ENSPNAG00000013387)	ENSPNAG00000013371	ENSPNAG00000013363	HAPLN1 (ENSPNAG00000002713)	EDIL3 (ENSPNAG00000013308)	cox7c (ENSPNAG00000002667)	mblac2 (ENSPNAG00000013263)	polr3g (ENSPNAG00000005454)	lysmd3 (ENSPNAG00000002649)	adgrv1 (ENSPNAG00000002641)	arrdc3a (ENSPNAG00000002600)	ENSPNAG00000013171	ENSPNAG00000013143	ENSPNAG00000013122
Mexicana tetra	MODERN SPECIES	26	hspb11 (ENSAMXG00000036011)	mccc2 (ENSAMXG00000013897)	smn1 (ENSAMXG00000013884)	rtkna (ENSAMXG00000031391)	ENSAMXG00000013848	rhobtb4 (ENSAMXG00000013839)	wdr54 (ENSAMXG00000030513)	ENSAMXG00000039267	aqp3a (ENSAMXG00000042262)	POLK (ENSAMXG00000013760) #14	ANKDD1B (ENSAMXG00000031396) #15	ENSAMXG00000036512	sv2ca (ENSAMXG00000013674) #18	F2RL2 (ENSAMXG00000040816) #19	iqgap2 (ENSAMXG00000013577) ##20	f2r (ENSAMXG00000039666) #21	ssbp2a (ENSAMXG00000031820)	ENSAMXG00000031430	ENSAMXG00000031084	ENSAMXG00000031311	HAPLN1 (ENSAMXG00000042653)	EDIL3 (ENSAMXG00000035829)	ENSAMXG00000039110	ENSAMXG00000043082	cox7c (ENSAMXG00000032595)	RASA1 (ENSAMXG00000014658)	ccnh (ENSAMXG00000014644)	tmem161b (ENSAMXG00000037421)	mef2cb (ENSAMXG00000040877)	mblac2 (ENSAMXG00000032070)	polr3g (ENSAMXG00000014591)
Electric eel	MODERN SPECIES	234			rtkna (ENSEEEG00000004147)	ENSEEEG00000004151	rhobtb4 (ENSEEEG00000004153)	wdr54 (ENSEEEG00000004155)	ENSEEEG00000004157	aqp3a (ENSEEEG00000004158)	POLK (ENSEEEG00000004160) #14	ENSEEEG00000004164	ANKDD1B (ENSEEEG00000004166) #15	ENSEEEG00000004170	sv2ca (ENSEEEG00000004181) #18	iqgap2 (ENSEEEG00000004247) ##20	F2RL2 (ENSEEEG00000006873) #19	f2r (ENSEEEG00000006874) #21	ssbp2a (ENSEEEG00000006875)	zgc:110626 (ENSEEEG00000006876)	ENSEEEG00000006879	ENSEEEG00000006881	ENSEEEG00000006882	hapln1a (ENSEEEG00000006886)	EDIL3 (ENSEEEG00000006898)
Cyprinoidei	ANCESTRAL SPECIES	43	ENSGT00940000156489	ENSGT00940000160420	ENSGT00940000156282.a.a	ENSGT00940000154821.b	ENSGT00940000156085	ENSGT01070000253744.b.b.e.a	ENSGT00390000000113.B	ENSGT00940000156290.a	ENSGT00940000165457.b	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000166014	ENSGT00940000156102.q.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634	ENSGT00390000000672.a.b	ENSGT00940000157492.b	ENSGT00390000017819	ENSGT01100000263701	ENSGT00940000158711	ENSGT00940000154880
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES		ENSGT00940000154886.a.a.e.a	ENSGT00940000156489.b	ENSGT00940000160420.f	ENSGT00940000156282.a.a.b	ENSGT00940000154821.b.fb	ENSGT00940000156085.s	ENSGT01070000253744.b.b.e.a.a.a	ENSGT00390000000113.B.h	ENSGT00940000156290.a.a	ENSGT00940000165457.b.a	ENSGT00940000156667.k #14	ENSGT00940000164571.a	ENSGT00950000182940.b.b.e.b #18	ENSGT01050000244840.A.b.b.a.b #19	ENSGT00950000183076.a.b.a.a ##20	ENSGT01050000244840.A.a.b.e.a #21	ENSGT00950000183049.E.t.a	ENSGT00940000164012.C.d	ENSGT00940000166014.g	ENSGT00940000156102.q.b.g	ENSGT00940000166906.g	ENSGT00940000158144.a.e	ENSGT00390000018086.c	ENSGT00940000155846.h.b	ENSGT00390000008634.k	ENSGT00390000000672.a.b.v	ENSGT00940000157492.b.f	ENSGT00390000017819.f	ENSGT01100000263701	ENSGT00940000158711.d	ENSGT00940000157492.b.e.a
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000154886.a.a.e.a	ENSGT00940000156489.b	ENSGT00940000160420.f	ENSGT00940000156282.a.a.b	ENSGT00940000154821.b.fb	ENSGT00940000156085.s	ENSGT01070000253744.b.b.e.a.a.a	ENSGT00390000000113.B.h	ENSGT00940000156290.a.a	ENSGT00940000165457.b.a	ENSGT00940000156667.k #14	ENSGT00940000164571.a	ENSGT00950000182940.b.b.e.b #18	ENSGT01050000244840.A.b.b.a.b #19	ENSGT00950000183076.a.b.a.a ##20	ENSGT01050000244840.A.a.b.e.a #21	ENSGT00950000183049.E.t.a	ENSGT00940000164012.C.d	ENSGT00940000166014.g	ENSGT00940000156102.q.b.g	ENSGT00940000166906.g	ENSGT00390000018086.c	ENSGT00940000155846.h.b	ENSGT00390000008634.k	ENSGT00390000000672.a.b.v	ENSGT00940000157492.b.e.a	ENSGT00390000017819.e	ENSGT00940000158711.c	ENSGT00940000155411.c.m.b	ENSGT00940000164012.A.c	ENSGT00940000157876.d.a
Common carp reference	MODERN SPECIES	7	dmrt1 (ENSCCRG00000032706)	dmrt3a (ENSCCRG00000032698)	dmrt2a (ENSCCRG00000032696)	smarca2 (ENSCCRG00000032681)	ENSCCRG00000078663	adamts3 (ENSCCRG00000072701)	NPFFR2 (ENSCCRG00000075865)	gc (ENSCCRG00000028390)	slc4a4a (ENSCCRG00000028529)	ifngr2 (ENSCCRG00000044672)	POLK (ENSCCRG00000065827) #14	ENSCCRG00000044683	sv2ca (ENSCCRG00000017476) #18	F2RL2 (ENSCCRG00000025911) #19	iqgap2 (ENSCCRG00000080066) ##20	f2r (ENSCCRG00000025914) #21	ssbp2a (ENSCCRG00000025930)	ENSCCRG00000067008	ENSCCRG00000025654	ENSCCRG00000025969	hapln1a (ENSCCRG00000025988)	EDIL3 (ENSCCRG00000025530)	COX7C (ENSCCRG00000030424)	ENSCCRG00000055250	RASA1 (ENSCCRG00000032499)	ccnh (ENSCCRG00000032476)	tmem161b (ENSCCRG00000062471)	mef2cb (ENSCCRG00000066685)	mblac2 (ENSCCRG00000076340)	lysmd3 (ENSCCRG00000029548)	ARRDC3 (ENSCCRG00000054898)
Golden-line barbel	MODERN SPECIES	1014								gc (ENSSGRG00000007745)	ENSSGRG00000007791	slc4a4a (ENSSGRG00000007817)	ifngr2 (ENSSGRG00000008276)	ENSSGRG00000008279 #14	ENSSGRG00000008302	sv2ca (ENSSGRG00000008310) #18	iqgap2 (ENSSGRG00000008762) ##20	f2r (ENSSGRG00000014612) #21	ssbp2a (ENSSGRG00000014628)	ENSSGRG00000015733
Goldfish	MODERN SPECIES	2534												ifngr2 (ENSCARG00000068252)	POLK (ENSCARG00000068242) #14	F2RL2 (ENSCARG00000068237) #19	iqgap2 (ENSCARG00000053891) ##20	f2r (ENSCARG00000053236) #21	ssbp2a (ENSCARG00000053143)	ENSCARG00000053127	ENSCARG00000053116	ENSCARG00000053040	hapln1a (ENSCARG00000053001)	EDIL3 (ENSCARG00000052956)
Cyprininae	ANCESTRAL SPECIES	53	ENSGT00940000156489.a	ENSGT00940000160420.e	ENSGT00940000156282.a.a.a	ENSGT00940000154821.b.gb	ENSGT00940000156085.t	ENSGT01070000253744.b.b.e.a.a.b	ENSGT00390000000113.B.g	ENSGT00940000156290.a.b	ENSGT00940000165457.b.b	ENSGT00940000156667.l #14	ENSGT00940000154170.A #15	ENSGT00940000164571.b	ENSGT00950000182940.b.b.e.a #18	ENSGT00950000183076.a.b.a.b ##20	ENSGT01050000244840.A.b.b.a.a #19	ENSGT01050000244840.A.a.b.e.b #21	ENSGT00950000183049.E.t.b	ENSGT00940000164012.C.c	ENSGT00940000166014.h	ENSGT00940000156102.q.b.h	ENSGT00940000156102.q.a.b	ENSGT00940000166906.h	ENSGT00940000158144.a.f	ENSGT00390000018086.d	ENSGT00940000155846.h.a	ENSGT00390000008634.l	ENSGT00390000000672.a.b.u	ENSGT00940000157492.b.e.b
Goldfish	MODERN SPECIES	23	dmrt2a (ENSCARG00000015272)	smarca2 (ENSCARG00000015308)	adamts3 (ENSCARG00000015706)	NPFFR2 (ENSCARG00000018894)	ENSCARG00000018903	ENSCARG00000018907	slc4a4a (ENSCARG00000019161)	ifngr2 (ENSCARG00000025619)	POLK (ENSCARG00000025641) #14	ANKDD1B (ENSCARG00000025684) #15	ENSCARG00000025709	sv2ca (ENSCARG00000025726) #18	iqgap2 (ENSCARG00000026236) ##20	F2RL2 (ENSCARG00000036677) #19	ENSCARG00000036686	f2r (ENSCARG00000036706) #21	ssbp2a (ENSCARG00000036772)	ENSCARG00000038071	ENSCARG00000038118	ENSCARG00000038141	hapln1a (ENSCARG00000038212)	EDIL3 (ENSCARG00000038230)	kif2a (ENSCARG00000038449)	CEPT1 (ENSCARG00000039926)	ENSCARG00000040074	dennd2da (ENSCARG00000040081)	ENSCARG00000040231	sap30bp (ENSCARG00000040273)	itgb4 (ENSCARG00000040676)	zgc:194990 (ENSCARG00000042031)	ENSCARG00000042064
Cyprininae_a	ANCESTRAL SPECIES	151	ENSGT00390000015513.a.b.a.d	ENSGT00940000154886.a.a.e.b	ENSGT00940000156489.a	ENSGT00940000160420.e	ENSGT00940000156282.a.a.a	ENSGT00940000154821.b.gb	ENSGT00940000156085.t	ENSGT01070000253744.b.b.e.a.a.b	ENSGT00390000000113.B.g	ENSGT00940000156290.a.b	ENSGT00940000156667.l #14	ENSGT00940000164571.b	ENSGT00950000182940.b.b.e.a #18	ENSGT01050000244840.A.b.b.a.a #19	ENSGT00950000183076.a.b.a.b ##20	ENSGT01050000244840.A.a.b.e.b #21	ENSGT00950000183049.E.t.b	ENSGT00940000164012.C.c	ENSGT00940000166014.h	ENSGT00940000156102.q.b.h	ENSGT00940000156102.q.a.b	ENSGT00940000166906.h	ENSGT00940000158144.a.f
Common carp reference	MODERN SPECIES	15	ENSCCRG00000039510	dmrt1 (ENSCCRG00000039591)	dmrt3a (ENSCCRG00000048607)	dmrt2a (ENSCCRG00000061986)	smarca2 (ENSCCRG00000055138)	adamts3 (ENSCCRG00000052924)	NPFFR2 (ENSCCRG00000028360)	gc (ENSCCRG00000001110)	slc4a4a (ENSCCRG00000009148)	ENSCCRG00000060599	POLK (ENSCCRG00000041529) #14	ENSCCRG00000041503	sv2ca (ENSCCRG00000041429) #18	F2RL2 (ENSCCRG00000041422) #19	iqgap2 (ENSCCRG00000080285) ##20	f2r (ENSCCRG00000019984) #21	ssbp2a (ENSCCRG00000019895)	ENSCCRG00000041408	ENSCCRG00000025959	ENSCCRG00000070726	ENSCCRG00000054071	hapln1a (ENSCCRG00000051272)	EDIL3 (ENSCCRG00000073037)	RASA1 (ENSCCRG00000032728)	ccnh (ENSCCRG00000032654)	tmem161b (ENSCCRG00000032578)	mef2cb (ENSCCRG00000033625)	mblac2 (ENSCCRG00000013675)	polr3g (ENSCCRG00000073638)	lysmd3 (ENSCCRG00000013677)	adgrv1 (ENSCCRG00000001765)
Golden-line barbel	MODERN SPECIES	782												ENSSGRG00000032398	sv2ca (ENSSGRG00000032399) #18	iqgap2 (ENSSGRG00000032555) ##20	F2RL2 (ENSSGRG00000037829) #19	f2r (ENSSGRG00000037831) #21	ssbp2a (ENSSGRG00000037837)	ENSSGRG00000037861	ENSSGRG00000037862	ENSSGRG00000037863	ENSSGRG00000037864	hapln1a (ENSSGRG00000037875)	EDIL3 (ENSSGRG00000037876)
Zebrafish	MODERN SPECIES	20	dmrt1 (ENSDARG00000007349)	dmrt3a (ENSDARG00000035290)	dmrt2a (ENSDARG00000015072)	smarca2 (ENSDARG00000008904)	adamts3 (ENSDARG00000060127)	NPFFR2 (ENSDARG00000033635)	gc (ENSDARG00000089310)	slc4a4a (ENSDARG00000013730)	ifngr2 (ENSDARG00000067795)	POLK (ENSDARG00000059963) #14	ANKDD1B (ENSDARG00000025866) #15	ENSDARG00000059982	sv2ca (ENSDARG00000059997) #18	iqgap2 (ENSDARG00000060010) ##20	F2RL2 (ENSDARG00000090524) #19	f2r (ENSDARG00000060012) #21	ssbp2a (ENSDARG00000057395)	zgc:110626 (ENSDARG00000053159)	si:ch211-130m23.2 (ENSDARG00000095136)	ENSDARG00000098013	ENSDARG00000103515	hapln1a (ENSDARG00000089769)	EDIL3 (ENSDARG00000093413)	cox7c (ENSDARG00000104537)	RASA1 (ENSDARG00000035535)	ccnh (ENSDARG00000007657)	ENSDARG00000067658	tmem161b (ENSDARG00000055989)	mef2cb (ENSDARG00000009418)	mblac2 (ENSDARG00000059689)	polr3g (ENSDARG00000024687)
Euteleosteomorpha	ANCESTRAL SPECIES	32	ENSGT00980000202325	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00950000183049.E	ENSGT00940000164012.C	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846
Acanthomorphata	ANCESTRAL SPECIES	29	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000177329	ENSGT00940000157654	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846
Tiger tail seahorse	MODERN SPECIES	134	homer1b (ENSHCOG00000015306)	JMY (ENSHCOG00000015287)	ENSHCOG00000015263	dimt1l (ENSHCOG00000015252)	kif2a (ENSHCOG00000015198)	unc45b (ENSHCOG00000015121)	ENSHCOG00000015088	pip5k1bb (ENSHCOG00000015080)	cert1a (ENSHCOG00000015043) ##13	POLK (ENSHCOG00000014968) #14	ANKDD1B (ENSHCOG00000014915) #15	ENSHCOG00000014871	sv2ca (ENSHCOG00000014857) #18	iqgap2 (ENSHCOG00000014783) ##20	F2RL2 (ENSHCOG00000014726) #19	f2r (ENSHCOG00000014720) #21	ENSHCOG00000014714	ENSHCOG00000014708	ssbp2a (ENSHCOG00000014699)	ENSHCOG00000014672	ENSHCOG00000014655	ENSHCOG00000014638	ENSHCOG00000014626	ENSHCOG00000014619	ENSHCOG00000014599	ENSHCOG00000014554	ENSHCOG00000014544	rfk (ENSHCOG00000014538)	pcsk5b (ENSHCOG00000014530)	ENSHCOG00000014520	RFESD (ENSHCOG00000014514)
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT01100000264020	ENSGT00940000165930.B	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000178644	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Aplocheiloidei	ANCESTRAL SPECIES	24	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.g	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a
Mangrove rivulus	MODERN SPECIES	26	ENSKMAG00000012731	homer1b (ENSKMAG00000012715)	JMY (ENSKMAG00000012684)	ENSKMAG00000012646	unc45b (ENSKMAG00000012488)	kif2a (ENSKMAG00000012298)	dimt1l (ENSKMAG00000012211)	pip5k1bb (ENSKMAG00000012161)	cert1a (ENSKMAG00000012059) ##13	POLK (ENSKMAG00000012000) #14	ANKDD1B (ENSKMAG00000011967) #15	ENSKMAG00000011941	sv2ca (ENSKMAG00000011909) #18	F2RL2 (ENSKMAG00000011888) #19	iqgap2 (ENSKMAG00000011786) ##20	f2r (ENSKMAG00000011736) #21	ENSKMAG00000011714	ENSKMAG00000011697	ENSKMAG00000011685	ssbp2a (ENSKMAG00000011610)	ENSKMAG00000011577	zgc:110626 (ENSKMAG00000011544)	ENSKMAG00000011528	ENSKMAG00000011514	ENSKMAG00000011487	ENSKMAG00000011474	tmem167a (ENSKMAG00000011448)	ENSKMAG00000011425	ENSKMAG00000011410
Turquoise killifish	MODERN SPECIES	1627	ENSNFUG00015021190	HOMER1 (ENSNFUG00015021178)	JMY (ENSNFUG00015021165)	CENPH (ENSNFUG00015021161)	dimt1l (ENSNFUG00015021156)	Nfu_g_1_008917 (ENSNFUG00015020023)	unc45b (ENSNFUG00015019001)	pip5k1bb (ENSNFUG00015018824)	cert1a (ENSNFUG00015018510) ##13	POLK (ENSNFUG00015018463) #14	ANKDD1B (ENSNFUG00015018449) #15	POC5 (ENSNFUG00015018438)	sv2ca (ENSNFUG00015018393) #18	F2RL2 (ENSNFUG00015018384) #19	IQGAP2 (ENSNFUG00015014565) ##20	F2R (ENSNFUG00015014465) #21	OLA.20275 (ENSNFUG00015014455)	Nfu_g_1_009468 (ENSNFUG00015014441)	SSBP2 (ENSNFUG00015014251)	zgc:110626 (ENSNFUG00015014153)	ENSNFUG00015014139	ENSNFUG00015014113	ENSNFUG00015014101	ENSNFUG00015014089	tmem167a (ENSNFUG00015014079)	ENSNFUG00015014068	ENSNFUG00015014061	ENSNFUG00015023089	ENSNFUG00015023085	EDIL3B (ENSNFUG00015022777)	cox7c (ENSNFUG00015022752)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a.m	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c.f	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a.m	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000156639.c.f	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.a.a	ENSGT00950000183049.E	ENSGT00940000164012.C.i.a.m	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a
NAME_6	ANCESTRAL SPECIES	32	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c.f.a	ENSGT00940000156639.c.f.b	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.a.a	ENSGT00950000183049.E	ENSGT00940000164012.C.i.a.m	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b
Amazon molly	MODERN SPECIES	354	JMY (ENSPFOG00000017702)	ENSPFOG00000017726	dimt1l (ENSPFOG00000017743)	kif2a (ENSPFOG00000017786)	unc45b (ENSPFOG00000017837)	pip5k1bb (ENSPFOG00000017906)	pip5k1bb (ENSPFOG00000017934)	cert1a (ENSPFOG00000017965) ##13	POLK (ENSPFOG00000018013) #14	ANKDD1B (ENSPFOG00000018049) #15	ENSPFOG00000018064	sv2ca (ENSPFOG00000018083) #18	iqgap2 (ENSPFOG00000018124) ##20	F2RL2 (ENSPFOG00000018281) #19	ENSPFOG00000018283	f2r (ENSPFOG00000021748) #21	ENSPFOG00000018285	ENSPFOG00000018287	ssbp2a (ENSPFOG00000018292)	ENSPFOG00000018293	ENSPFOG00000018301	ENSPFOG00000023016	ENSPFOG00000022290	ENSPFOG00000018313	tmem167a (ENSPFOG00000018315)
Sailfin molly	MODERN SPECIES	577								ENSPLAG00000020263	cert1a (ENSPLAG00000020247) ##13	POLK (ENSPLAG00000020212) #14	ANKDD1B (ENSPLAG00000020192) #15	ENSPLAG00000020134	sv2ca (ENSPLAG00000020119) #18	iqgap2 (ENSPLAG00000020082) ##20	F2RL2 (ENSPLAG00000020031) #19	f2r (ENSPLAG00000020020) #21	ENSPLAG00000020016	ENSPLAG00000000444	ssbp2a (ENSPLAG00000019971)	ENSPLAG00000019896	ENSPLAG00000019848	ENSPLAG00000019841	ENSPLAG00000019819	ENSPLAG00000019809
Guppy	MODERN SPECIES	461	homer1b (ENSPREG00000003004)	JMY (ENSPREG00000003035)	ENSPREG00000003052	dimt1l (ENSPREG00000003097)	kif2a (ENSPREG00000003137)	unc45b (ENSPREG00000003235)	ENSPREG00000003300	pip5k1bb (ENSPREG00000003315)	cert1a (ENSPREG00000003405) ##13	POLK (ENSPREG00000003558) #14	ENSPREG00000003643	sv2ca (ENSPREG00000003686) #18	iqgap2 (ENSPREG00000003744) ##20	ENSPREG00000003890	F2RL2 (ENSPREG00000003905) #19	f2r (ENSPREG00000003916) #21	ENSPREG00000003922	ENSPREG00000003937	ENSPREG00000003945	ENSPREG00000003968	ssbp2a (ENSPREG00000003987)	ENSPREG00000004065	ENSPREG00000004089	ENSPREG00000004116	ENSPREG00000004131	ENSPREG00000004147	ENSPREG00000004162	tmem167a (ENSPREG00000004173)	ENSPREG00000004192	ENSPREG00000004208	ENSPREG00000004230
Platyfish	MODERN SPECIES	3	JMY (ENSXMAG00000007170)	ENSXMAG00000007167	dimt1l (ENSXMAG00000007137)	kif2a (ENSXMAG00000007104)	unc45b (ENSXMAG00000007077)	ENSXMAG00000026507	ENSXMAG00000023476	pip5k1bb (ENSXMAG00000007055)	cert1a (ENSXMAG00000007034) ##13	POLK (ENSXMAG00000007018) #14	ANKDD1B (ENSXMAG00000007009) #15	ENSXMAG00000007002	sv2ca (ENSXMAG00000006957) #18	iqgap2 (ENSXMAG00000006794) ##20	F2RL2 (ENSXMAG00000026316) #19	f2r (ENSXMAG00000020238) #21	ENSXMAG00000006792	ENSXMAG00000022336	ENSXMAG00000029905	ENSXMAG00000023825	ssbp2a (ENSXMAG00000006775)	ENSXMAG00000021171	zgc:110626 (ENSXMAG00000006771)	ENSXMAG00000006755	ENSXMAG00000023025	ENSXMAG00000020919	ENSXMAG00000029021	tmem167a (ENSXMAG00000027342)	ENSXMAG00000025960	ENSXMAG00000024568	ENSXMAG00000008743
NAME_4	ANCESTRAL SPECIES	13	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a.m	ENSGT01100000264020	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.h	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b
Sheepshead minnow	MODERN SPECIES	215											sv2ca (ENSCVAG00000022091) #18	ENSCVAG00000022051	ENSCVAG00000022037	F2RL2 (ENSCVAG00000022027) #19	ENSCVAG00000022020 ##20	f2r (ENSCVAG00000022012) #21	ENSCVAG00000022005	ENSCVAG00000021992	ENSCVAG00000021982	ENSCVAG00000021973	ssbp2a (ENSCVAG00000021963)	zgc:110626 (ENSCVAG00000021907)	ENSCVAG00000021888	zgc:110353 (ENSCVAG00000021876)	ENSCVAG00000021860	ENSCVAG00000021851	ENSCVAG00000021833	ENSCVAG00000021823	tmem167a (ENSCVAG00000021817)	ENSCVAG00000021807	ENSCVAG00000021793
Mummichog	MODERN SPECIES	2186	tent2 (ENSFHEG00000006065)	homer1b (ENSFHEG00000006139)	JMY (ENSFHEG00000006151)	ENSFHEG00000006246	dimt1l (ENSFHEG00000006325)	kif2a (ENSFHEG00000006423)	unc45b (ENSFHEG00000006479)	pip5k1bb (ENSFHEG00000006490)	cert1a (ENSFHEG00000006563) ##13	POLK (ENSFHEG00000006613) #14	ANKDD1B (ENSFHEG00000006646) #15	ENSFHEG00000006670	sv2ca (ENSFHEG00000006718) #18	F2RL2 (ENSFHEG00000006721) #19	iqgap2 (ENSFHEG00000006863) ##20	f2r (ENSFHEG00000006875) #21	ENSFHEG00000006877	ENSFHEG00000006882	ENSFHEG00000006888	ENSFHEG00000006892	ssbp2a (ENSFHEG00000006960)	ENSFHEG00000006978	ENSFHEG00000007053	ENSFHEG00000007069	ENSFHEG00000007076	ENSFHEG00000007124	ENSFHEG00000007150	ENSFHEG00000007163	tmem167a (ENSFHEG00000007183)	ENSFHEG00000007222	ENSFHEG00000007286
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a.p	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.o	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a.p	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.o	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906
Javanese ricefish	MODERN SPECIES	23	tent2 (ENSOJAG00000023019)	homer1b (ENSOJAG00000023042)	JMY (ENSOJAG00000023052)	ENSOJAG00000023099	dimt1l (ENSOJAG00000023113)	kif2a (ENSOJAG00000023309)	unc45b (ENSOJAG00000023693)	pip5k1bb (ENSOJAG00000023840)	cert1a (ENSOJAG00000023858) ##13	POLK (ENSOJAG00000023877) #14	ANKDD1B (ENSOJAG00000023882) #15	ENSOJAG00000023883	sv2ca (ENSOJAG00000023886) #18	iqgap2 (ENSOJAG00000023955) ##20	F2RL2 (ENSOJAG00000024065) #19	f2r (ENSOJAG00000024067) #21	ENSOJAG00000024068	ENSOJAG00000024069	ENSOJAG00000024070	ssbp2a (ENSOJAG00000024079)	ENSOJAG00000024093	ENSOJAG00000024094	ENSOJAG00000024096	ENSOJAG00000024097	ENSOJAG00000024098	ENSOJAG00000024099	tmem167a (ENSOJAG00000024101)	ENSOJAG00000024102	ENSOJAG00000024104	hapln1a (ENSOJAG00000024106)	EDIL3 (ENSOJAG00000024107)
Indian medaka	MODERN SPECIES	11	cmya5 (ENSOMEG00000005068)	tent2 (ENSOMEG00000005116)	homer1b (ENSOMEG00000005157)	JMY (ENSOMEG00000005183)	ENSOMEG00000005220	dimt1l (ENSOMEG00000005237)	kif2a (ENSOMEG00000005274)	unc45b (ENSOMEG00000005327)	pip5k1bb (ENSOMEG00000005373)	cert1a (ENSOMEG00000005508) ##13	POLK (ENSOMEG00000000965) #14	ENSOMEG00000005604	sv2ca (ENSOMEG00000005653) #18	F2RL2 (ENSOMEG00000005669) #19	iqgap2 (ENSOMEG00000000123) ##20	f2r (ENSOMEG00000005744) #21	ENSOMEG00000005752	ENSOMEG00000005811	ssbp2a (ENSOMEG00000005892)	ENSOMEG00000005916	ENSOMEG00000005927	ENSOMEG00000005955	ENSOMEG00000005993	ENSOMEG00000006013	ENSOMEG00000006034	ENSOMEG00000006046	tmem167a (ENSOMEG00000000141)	ENSOMEG00000006134	TAAR1 (ENSOMEG00000006144)	ENSOMEG00000006164	hapln1a (ENSOMEG00000006182)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a.p	ENSGT00940000165930.B.g	ENSGT01030000236208	ENSGT00940000164012.C.i.a.o	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Japanese Medaka HdrR	MODERN SPECIES	23	homer1b (ENSORLG00000009039)	JMY (ENSORLG00000009070)	ENSORLG00000025771	dimt1l (ENSORLG00000009118)	kif2a (ENSORLG00000009180)	unc45b (ENSORLG00000009250)	pip5k1bb (ENSORLG00000009286)	ENSORLG00000009331 ##13	POLK (ENSORLG00000009364) #14	ANKDD1B (ENSORLG00000009384) #15	ENSORLG00000009402	ENSORLG00000028194	sv2ca (ENSORLG00000009453) #18	iqgap2 (ENSORLG00000009749) ##20	F2RL2 (ENSORLG00000022430) #19	f2r (ENSORLG00000009766) #21	ENSORLG00000009771	ENSORLG00000009780	ENSORLG00000009786	ssbp2a (ENSORLG00000009816)	ENSORLG00000030513	zgc:110626 (ENSORLG00000009825)	ENSORLG00000024762	ENSORLG00000025971	ENSORLG00000025317	ENSORLG00000024968	ENSORLG00000009836	tmem167a (ENSORLG00000009841)	ENSORLG00000009844	ENSORLG00000024087	ENSORLG00000009876
Chinese medaka	MODERN SPECIES	528	cmya5 (ENSOSIG00000022166)	tent2 (ENSOSIG00000022187)	homer1b (ENSOSIG00000022206)	JMY (ENSOSIG00000022211)	ENSOSIG00000022216	dimt1l (ENSOSIG00000022231)	kif2a (ENSOSIG00000022348)	unc45b (ENSOSIG00000022958)	pip5k1bb (ENSOSIG00000023168)	cert1a (ENSOSIG00000023244) ##13	POLK (ENSOSIG00000023445) #14	ANKDD1B (ENSOSIG00000023485) #15	ENSOSIG00000023487	iqgap2 (ENSOSIG00000023610) ##20	F2RL2 (ENSOSIG00000023757) #19	f2r (ENSOSIG00000023758) #21	ENSOSIG00000023760	ENSOSIG00000023762	ENSOSIG00000023763	ssbp2a (ENSOSIG00000023827)	ENSOSIG00000023859	ENSOSIG00000023860	ENSOSIG00000023861	ENSOSIG00000023862	ENSOSIG00000023863	ENSOSIG00000023864	tmem167a (ENSOSIG00000023865)	ENSOSIG00000023866	ENSOSIG00000003741	ENSOSIG00000003759	ENSOSIG00000003778
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.h ##13	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.h ##13	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.i	ENSGT00940000165930.B.j	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	3	kif2a (ENSONIG00000013754)	ENSONIG00000043220	unc45b (ENSONIG00000013759)	ENSONIG00000040694	kif2a (ENSONIG00000033105)	kif2a (ENSONIG00000039186)	pip5k1bb (ENSONIG00000016138)	ENSONIG00000031232 ##13	cert1a (ENSONIG00000016132) ##13	POLK (ENSONIG00000016130) #14	ANKDD1B (ENSONIG00000016127) #15	ENSONIG00000016123	sv2ca (ENSONIG00000016121) #18	F2RL2 (ENSONIG00000016120) #19	iqgap2 (ENSONIG00000016113) ##20	f2r (ENSONIG00000042468) #21	ENSONIG00000006898	ENSONIG00000035839	ENSONIG00000027834	ENSONIG00000032779	ssbp2a (ENSONIG00000035570)	ENSONIG00000034532	ENSONIG00000031589	ENSONIG00000028275	ENSONIG00000041466	ENSONIG00000015915	ENSONIG00000035172	ENSONIG00000028822	tmem167a (ENSONIG00000028217)	ENSONIG00000015918	ENSONIG00000015920
Nile tilapia	MODERN SPECIES	8	fxr1 (ENSONIG00000003740)	ENSONIG00000032390	ttc14 (ENSONIG00000003747)	ENSONIG00000029296	ENSONIG00000029705	ENSONIG00000041410	ENSONIG00000035489	b3gat1a (ENSONIG00000003750)	ENSONIG00000027731	hps3 (ENSONIG00000003752)	bcar3 (ENSONIG00000003760)	fnbp1l (ENSONIG00000003764)	si:ch211-198n5.11 (ENSONIG00000003770)	rpe65b (ENSONIG00000003773)	depdc1a (ENSONIG00000003784)	f2r (ENSONIG00000016111) #21	ENSONIG00000037532 ##20	aspm (ENSONIG00000003791)	NXPE3 (ENSONIG00000007980)	ENSONIG00000040498	ENSONIG00000038098	ENSONIG00000029115	ENSONIG00000041500	NXPE3 (ENSONIG00000003801)	ENSONIG00000010939	ENSONIG00000030219	ENSONIG00000034416	ENSONIG00000040706	cfhl4 (ENSONIG00000033270)	ENSONIG00000038913	cfh (ENSONIG00000010940)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.h ##13	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00970000197576	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.i	ENSGT00940000165930.B.j	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.h ##13	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.i	ENSGT00940000165930.B.j	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Burton s mouthbrooder	MODERN SPECIES	321								pip5k1bb (ENSHBUG00000008909)	cert1a (ENSHBUG00000009042) ##13	POLK (ENSHBUG00000009069) #14	ANKDD1B (ENSHBUG00000009119) #15	ENSHBUG00000009126	sv2ca (ENSHBUG00000009169) #18	F2RL2 (ENSHBUG00000009178) #19	iqgap2 (ENSHBUG00000009270) ##20	f2r (ENSHBUG00000009285) #21	ENSHBUG00000009306	ENSHBUG00000009322	ENSHBUG00000009343	ssbp2a (ENSHBUG00000009411)	ENSHBUG00000009436	ENSHBUG00000009460	zgc:110353 (ENSHBUG00000009481)	ENSHBUG00000009491	ENSHBUG00000009499	tmem167a (ENSHBUG00000009520)	ENSHBUG00000009573	ENSHBUG00000009595	ENSHBUG00000009620	hapln1a (ENSHBUG00000009630)	EDIL3 (ENSHBUG00000009646)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.h ##13	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.i	ENSGT00940000165930.B.j	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000156639.c	ENSGT00940000155123.a.g ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.i	ENSGT00940000165930.B.j	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Eastern happy	MODERN SPECIES	3	ENSACLG00000003838	JMY (ENSACLG00000003841)	ENSACLG00000003880	dimt1l (ENSACLG00000003923)	kif2a (ENSACLG00000003960)	unc45b (ENSACLG00000004010)	ENSACLG00000004060	pip5k1bb (ENSACLG00000004076)	cert1a (ENSACLG00000004115) ##13	POLK (ENSACLG00000004371) #14	ANKDD1B (ENSACLG00000004393) #15	ENSACLG00000004421	iqgap2 (ENSACLG00000004469) ##20	F2RL2 (ENSACLG00000004572) #19	ENSACLG00000004586	f2r (ENSACLG00000004577) #21	ENSACLG00000004606	ENSACLG00000004622	ssbp2a (ENSACLG00000004665)	ENSACLG00000004738	ENSACLG00000004784	ENSACLG00000004809	ENSACLG00000004856	zgc:110353 (ENSACLG00000004869)	ENSACLG00000004880	ENSACLG00000004888	tmem167a (ENSACLG00000004895)	ENSACLG00000004901	ENSACLG00000004904	ENSACLG00000004939	ENSACLG00000004948
Zebra mbuna	MODERN SPECIES	1094	SSH1 (ENSMZEG00005015320)	coro1ca (ENSMZEG00005015296)	ENSMZEG00005015285	ENSMZEG00005015281	si:ch211-191d15.2 (ENSMZEG00005015269)	sart3 (ENSMZEG00005015248)	ficd (ENSMZEG00005015239)	pip5k1bb (ENSMZEG00005015224)	cert1a (ENSMZEG00005015151) ##13	POLK (ENSMZEG00005015104) #14	ANKDD1B (ENSMZEG00005015079) #15	ENSMZEG00005015071	sv2ca (ENSMZEG00005015055) #18	F2RL2 (ENSMZEG00005015046) #19	iqgap2 (ENSMZEG00005014993) ##20	f2r (ENSMZEG00005014966) #21	ENSMZEG00005014958	ENSMZEG00005014951	ENSMZEG00005014936	ssbp2a (ENSMZEG00005014904)	ENSMZEG00005014856	ENSMZEG00005014783	zgc:110626 (ENSMZEG00005014751)	ENSMZEG00005014699	ENSMZEG00005014675	ENSMZEG00005014670	ENSMZEG00005014667	tmem167a (ENSMZEG00005014638)	ENSMZEG00005014624	ENSMZEG00005014615	ENSMZEG00005014607
P. nyererei	MODERN SPECIES	301	JMY (ENSPNYG00000019231)	ENSPNYG00000019261	dimt1l (ENSPNYG00000019293)	kif2a (ENSPNYG00000019342)	ENSPNYG00000019422	ENSPNYG00000019427	pip5k1bb (ENSPNYG00000019445)	cert1a (ENSPNYG00000019470) ##13	ENSPNYG00000019479 ##13	POLK (ENSPNYG00000019513) #14	ANKDD1B (ENSPNYG00000019592) #15	ENSPNYG00000019658	sv2ca (ENSPNYG00000019844) #18	iqgap2 (ENSPNYG00000019924) ##20	F2RL2 (ENSPNYG00000020000) #19	f2r (ENSPNYG00000020014) #21	ENSPNYG00000020027	ENSPNYG00000020035	ssbp2a (ENSPNYG00000020062)	ENSPNYG00000020101	zgc:110626 (ENSPNYG00000020139)	zgc:110353 (ENSPNYG00000020171)	ENSPNYG00000020182	ENSPNYG00000020193	tmem167a (ENSPNYG00000020201)	ENSPNYG00000020225	ENSPNYG00000020261	ENSPNYG00000020287	hapln1a (ENSPNYG00000020301)	EDIL3 (ENSPNYG00000020312)	cox7c (ENSPNYG00000020360)
Lyretail cichlid	MODERN SPECIES	296	kif2a (ENSNBRG00000003314)	ENSNBRG00000003293	unc45b (ENSNBRG00000003255)	ENSNBRG00000003236	ENSNBRG00000003215	pip5k1bb (ENSNBRG00000003162)	cert1a (ENSNBRG00000003125) ##13	cert1a (ENSNBRG00000003067) ##13	POLK (ENSNBRG00000003007) #14	ENSNBRG00000002971	ANKDD1B (ENSNBRG00000002921) #15	ENSNBRG00000002890	sv2ca (ENSNBRG00000002842) #18	F2RL2 (ENSNBRG00000002821) #19	iqgap2 (ENSNBRG00000002727) ##20	f2r (ENSNBRG00000002708) #21	ENSNBRG00000002715	ENSNBRG00000002695	ENSNBRG00000002660	ENSNBRG00000002601	ENSNBRG00000002575	ENSNBRG00000002562	ENSNBRG00000002520	ENSNBRG00000002487	ENSNBRG00000002459	ENSNBRG00000002430	zgc:110353 (ENSNBRG00000002407)	ENSNBRG00000002394	ENSNBRG00000002393	tmem167a (ENSNBRG00000002358)	ENSNBRG00000002324
Midas cichlid	MODERN SPECIES	744	JMY (ENSACIG00000021243)	ENSACIG00000021273	dimt1l (ENSACIG00000021290)	kif2a (ENSACIG00000021319)	unc45b (ENSACIG00000021351)	ENSACIG00000021392	ENSACIG00000021401	ENSACIG00000021424 ##13	cert1a (ENSACIG00000021453) ##13	POLK (ENSACIG00000021501) #14	ANKDD1B (ENSACIG00000021551) #15	ENSACIG00000021589	sv2ca (ENSACIG00000021677) #18	iqgap2 (ENSACIG00000021736) ##20	F2RL2 (ENSACIG00000022045) #19	f2r (ENSACIG00000022053) #21	ENSACIG00000022059	ENSACIG00000022065	ENSACIG00000022073	ENSACIG00000022088	ENSACIG00000022109	ENSACIG00000022122	ENSACIG00000022137	ENSACIG00000022152	tmem167a (ENSACIG00000022156)	ENSACIG00000022187	ENSACIG00000022194
Pomacentridae	ANCESTRAL SPECIES		ENSGT00510000046704.b.a.d	ENSGT00390000003122.b.h	ENSGT00390000003122.b.g	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b.h	ENSGT00390000003122.b.g	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906
Amphiprion	ANCESTRAL SPECIES	10	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b.h	ENSGT00390000003122.b.g	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906
Clown anemonefish	MODERN SPECIES	1539					ENSAOCG00000005768	kif2a (ENSAOCG00000005742)	unc45b (ENSAOCG00000005639)	pip5k1bb (ENSAOCG00000005569)	cert1a (ENSAOCG00000005494) ##13	POLK (ENSAOCG00000005411) #14	ANKDD1B (ENSAOCG00000002068) #15	ENSAOCG00000005381	sv2ca (ENSAOCG00000000244) #18	iqgap2 (ENSAOCG00000005344) ##20	F2RL2 (ENSAOCG00000005305) #19	f2r (ENSAOCG00000005299) #21	ENSAOCG00000005290	ENSAOCG00000005281	ENSAOCG00000005275	ssbp2a (ENSAOCG00000005260)	ENSAOCG00000005248	ENSAOCG00000002623	ENSAOCG00000005242	ENSAOCG00000005226	zgc:110353 (ENSAOCG00000005207)	ENSAOCG00000005198	ENSAOCG00000005185	ENSAOCG00000005178	ENSAOCG00000005172	ENSAOCG00000005154	hapln1a (ENSAOCG00000005112)
Spiny chromis	MODERN SPECIES	8								pip5k1bb (ENSAPOG00000024040)	cert1a (ENSAPOG00000024122) ##13	POLK (ENSAPOG00000024146) #14	ANKDD1B (ENSAPOG00000024183) #15	ENSAPOG00000024207	sv2ca (ENSAPOG00000024233) #18	F2RL2 (ENSAPOG00000024246) #19	iqgap2 (ENSAPOG00000024338) ##20	f2r (ENSAPOG00000024353) #21	ENSAPOG00000024371	ssbp2a (ENSAPOG00000000027)	ENSAPOG00000001726	ENSAPOG00000001735	ENSAPOG00000001750	ENSAPOG00000001766	ENSAPOG00000001777	ENSAPOG00000001805	ENSAPOG00000001813	tmem167a (ENSAPOG00000001827)	ENSAPOG00000001838	ENSAPOG00000001864	hapln1a (ENSAPOG00000001887)	EDIL3 (ENSAPOG00000001900)	cox7c (ENSAPOG00000001906)
Bicolor damselfish	MODERN SPECIES	470	JMY (ENSSPAG00000021666)	ENSSPAG00000021636	ENSSPAG00000021584	ENSSPAG00000021568	dimt1l (ENSSPAG00000021538)	kif2a (ENSSPAG00000021416)	unc45b (ENSSPAG00000021369)	pip5k1bb (ENSSPAG00000021338)	cert1a (ENSSPAG00000021295) ##13	POLK (ENSSPAG00000021274) #14	ANKDD1B (ENSSPAG00000021243) #15	ENSSPAG00000021228	sv2ca (ENSSPAG00000021204) #18	F2RL2 (ENSSPAG00000021188) #19	iqgap2 (ENSSPAG00000021112) ##20	f2r (ENSSPAG00000021094) #21	ENSSPAG00000021081	ENSSPAG00000021067	ssbp2a (ENSSPAG00000021047)	ENSSPAG00000021034
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000171478	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Ballan wrasse	MODERN SPECIES	378								pip5k1bb (ENSLBEG00000021476)	cert1a (ENSLBEG00000021522) ##13	POLK (ENSLBEG00000021611) #14	ANKDD1B (ENSLBEG00000021702) #15	ENSLBEG00000021761	sv2ca (ENSLBEG00000021805) #18	iqgap2 (ENSLBEG00000021869) ##20	F2RL2 (ENSLBEG00000021950) #19	f2r (ENSLBEG00000021961) #21	ENSLBEG00000021974	ssbp2a (ENSLBEG00000022015)	ENSLBEG00000022168	ENSLBEG00000022183	ela3l (ENSLBEG00000022197)	bco2l (ENSLBEG00000022280)	ENSLBEG00000022457	LZTS1 (ENSLBEG00000022488)	hspb11 (ENSLBEG00000022523)	smn1 (ENSLBEG00000022550)	rtkna (ENSLBEG00000022642)	mblac2 (ENSLBEG00000022686)	polr3g (ENSLBEG00000022698)	lysmd3 (ENSLBEG00000022719)	adgrv1 (ENSLBEG00000022779)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Perciformes	ANCESTRAL SPECIES	6	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.e.a	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846
Lumpfish	MODERN SPECIES	24	nkx2.7 (ENSCLMG00005018175)	ENSCLMG00005018182	slc25a37 (ENSCLMG00005018184)	entpd4 (ENSCLMG00005018186)	si:ch211-214j8.12 (ENSCLMG00005004247)	gda (ENSCLMG00005004261)	zgc:101016 (ENSCLMG00005004415)	pip5k1bb (ENSCLMG00005004499)	cert1a (ENSCLMG00005004870) ##13	POLK (ENSCLMG00005004946) #14	ANKDD1B (ENSCLMG00005004948) #15	ENSCLMG00005004952	sv2ca (ENSCLMG00005004960) #18	iqgap2 (ENSCLMG00005005209) ##20	F2RL2 (ENSCLMG00005019278) #19	f2r (ENSCLMG00005019280) #21	ssbp2a (ENSCLMG00005019300)	zgc:110626 (ENSCLMG00005020336)	ENSCLMG00005020337	ENSCLMG00005020338	ENSCLMG00005020339	tmem167a (ENSCLMG00005020340)	ENSCLMG00005020341	ENSCLMG00005020342	hapln1a (ENSCLMG00005020343)	EDIL3 (ENSCLMG00005020348)	cox7c (ENSCLMG00005020349)	RASA1 (ENSCLMG00005020356)	ccnh (ENSCLMG00005020776)	tmem161b (ENSCLMG00005020778)	mef2cb (ENSCLMG00005020784)
Stickleback	MODERN SPECIES	12	homer1b (ENSGACG00000009905)	JMY (ENSGACG00000009930)	ENSGACG00000009937	dimt1l (ENSGACG00000009941)	kif2a (ENSGACG00000009965)	unc45b (ENSGACG00000009985)	ENSGACG00000010004	pip5k1bb (ENSGACG00000010008)	cert1a (ENSGACG00000010013) ##13	POLK (ENSGACG00000010020) #14	ANKDD1B (ENSGACG00000010026) #15	ENSGACG00000010031	sv2ca (ENSGACG00000010037) #18	iqgap2 (ENSGACG00000010070) ##20	F2RL2 (ENSGACG00000010134) #19	f2r (ENSGACG00000010138) #21	ENSGACG00000010141	ENSGACG00000010145	ENSGACG00000010148	ssbp2a (ENSGACG00000010152)	ENSGACG00000010176	zgc:110626 (ENSGACG00000010177)	ENSGACG00000010182	ENSGACG00000010187	hapln1a (ENSGACG00000010212)	EDIL3 (ENSGACG00000010214)	cox7c (ENSGACG00000010223)	RASA1 (ENSGACG00000010225)	ccnh (ENSGACG00000010245)	tmem161b (ENSGACG00000010257)	ENSGACG00000010269
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086	ENSGT00940000155846	ENSGT00390000008634
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000007696	ENSCGOG00000007690	dimt1l (ENSCGOG00000007261)	kif2a (ENSCGOG00000006428)	ENSCGOG00000006415	unc45b (ENSCGOG00000006411)	unc45b (ENSCGOG00000006370)	pip5k1bb (ENSCGOG00000005218)	ENSCGOG00000003825 ##13	POLK (ENSCGOG00000003523) #14	ANKDD1B (ENSCGOG00000003504) #15	ENSCGOG00000003501	sv2ca (ENSCGOG00000003478) #18	F2RL2 (ENSCGOG00000003473) #19	iqgap2 (ENSCGOG00000000872) ##20	f2r (ENSCGOG00000000479) #21	ENSCGOG00000000466	ENSCGOG00000000456	ssbp2a (ENSCGOG00000011435)	ENSCGOG00000011401	ENSCGOG00000011399	ENSCGOG00000011397	ENSCGOG00000011396	zgc:110353 (ENSCGOG00000011394)	ENSCGOG00000011393	ENSCGOG00000011392	tmem167a (ENSCGOG00000011391)	ENSCGOG00000011389	ENSCGOG00000011385	ENSCGOG00000011382	hapln1a (ENSCGOG00000011381)
Pike perch	MODERN SPECIES	23	homer1b (ENSSLUG00000021870)	JMY (ENSSLUG00000021857)	ENSSLUG00000021827	ENSSLUG00000021819	dimt1l (ENSSLUG00000021807)	kif2a (ENSSLUG00000021057)	unc45b (ENSSLUG00000020746)	pip5k1bb (ENSSLUG00000020586)	ENSSLUG00000020363 ##13	POLK (ENSSLUG00000020136) #14	ANKDD1B (ENSSLUG00000020118) #15	ENSSLUG00000020112	sv2ca (ENSSLUG00000020101) #18	F2RL2 (ENSSLUG00000020097) #19	iqgap2 (ENSSLUG00000007830) ##20	f2r (ENSSLUG00000007139) #21	ssbp2a (ENSSLUG00000005602)	zgc:110626 (ENSSLUG00000005476)	ENSSLUG00000005458	ENSSLUG00000005453	tmem167a (ENSSLUG00000005447)	ENSSLUG00000005441	ENSSLUG00000005380	hapln1a (ENSSLUG00000005315)	EDIL3 (ENSSLUG00000005243)	cox7c (ENSSLUG00000005215)	RASA1 (ENSSLUG00000006142)	ccnh (ENSSLUG00000006071)	tmem161b (ENSSLUG00000005857)	mef2cb (ENSSLUG00000005748)	ENSSLUG00000005716
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.e #21
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005016972	ENSLCRG00005016971	dimt1l (ENSLCRG00005016967)	kif2a (ENSLCRG00005016676)	unc45b (ENSLCRG00005014822)	pip5k1bb (ENSLCRG00005014801)	cert1a (ENSLCRG00005014683) ##13	ENSLCRG00005014677 #14	POLK (ENSLCRG00005014672) #14	ANKDD1B (ENSLCRG00005014667) #15	ENSLCRG00005014665	sv2ca (ENSLCRG00005014630) #18	F2RL2 (ENSLCRG00005014625) #19	iqgap2 (ENSLCRG00005013527) ##20	ENSLCRG00005013514	f2r (ENSLCRG00005013513) #21	ENSLCRG00005013512	ssbp2a (ENSLCRG00005012862)	ENSLCRG00005012857	ENSLCRG00005012856	ENSLCRG00005012854	ENSLCRG00005012853	zgc:110353 (ENSLCRG00005012852)	ENSLCRG00005012851	tmem167a (ENSLCRG00005012847)	ENSLCRG00005012845	ENSLCRG00005012842	hapln1a (ENSLCRG00005012841)	EDIL3 (ENSLCRG00005012840)	cox7c (ENSLCRG00005012836)	RASA1 (ENSLCRG00005012270)
Gilthead seabream	MODERN SPECIES	19	homer1b (ENSSAUG00010008133)	JMY (ENSSAUG00010008130)	ENSSAUG00010008121	ENSSAUG00010008120	dimt1l (ENSSAUG00010008106)	kif2a (ENSSAUG00010005045)	unc45b (ENSSAUG00010002480)	pip5k1bb (ENSSAUG00010002436)	cert1a (ENSSAUG00010002264) ##13	POLK (ENSSAUG00010002225) #14	ANKDD1B (ENSSAUG00010002208) #15	ENSSAUG00010002199	sv2ca (ENSSAUG00010002154) #18	F2RL2 (ENSSAUG00010002137) #19	iqgap2 (ENSSAUG00010000602) ##20	f2r (ENSSAUG00010000440) #21	ENSSAUG00010000434	ENSSAUG00010000430	ssbp2a (ENSSAUG00010000334)	ENSSAUG00010000272	ENSSAUG00010000259	ENSSAUG00010000256	ENSSAUG00010000251	ENSSAUG00010000244	ENSSAUG00010000228	ENSSAUG00010000209	tmem167a (ENSSAUG00010000196)	ENSSAUG00010024588	ENSSAUG00010024584	hapln1a (ENSSAUG00010024583)	EDIL3 (ENSSAUG00010024582)
Tetraodontidae	ANCESTRAL SPECIES	12	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.o	ENSGT00940000165930.B.p	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000171478	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a
Fugu	MODERN SPECIES	13	tent2 (ENSTRUG00000021394)	homer1b (ENSTRUG00000009181)	JMY (ENSTRUG00000009036)	cenph (ENSTRUG00000021090)	dimt1l (ENSTRUG00000008885)	kif2a (ENSTRUG00000008573)	unc45b (ENSTRUG00000008123)	pip5k1bb (ENSTRUG00000007907)	cert1a (ENSTRUG00000007536) ##13	POLK (ENSTRUG00000007363) #14	ANKDD1B (ENSTRUG00000007215) #15	ENSTRUG00000025429	sv2ca (ENSTRUG00000006668) #18	iqgap2 (ENSTRUG00000005240) ##20	F2RL2 (ENSTRUG00000006610) #19	f2r (ENSTRUG00000005062) #21	ENSTRUG00000021525	ssbp2a (ENSTRUG00000005016)	ENSTRUG00000026429	zgc:110626 (ENSTRUG00000004658)	zgc:110353 (ENSTRUG00000033159)	ENSTRUG00000019858	ENSTRUG00000032284	ENSTRUG00000022193	tmem167a (ENSTRUG00000030059)	ENSTRUG00000024618	ENSTRUG00000023341	hapln1a (ENSTRUG00000002504)	EDIL3 (ENSTRUG00000001909)	ENSTRUG00000027436	cox7c (ENSTRUG00000021356)
Tetraodon	MODERN SPECIES	3	cmya5 (ENSTNIG00000015411)	tent2 (ENSTNIG00000015412)	homer1b (ENSTNIG00000015413)	JMY (ENSTNIG00000015414)	ENSTNIG00000015415	dimt1l (ENSTNIG00000015416)	kif2a (ENSTNIG00000015417)	unc45b (ENSTNIG00000015418)	pip5k1bb (ENSTNIG00000015419)	cert1a (ENSTNIG00000015420) ##13	POLK (ENSTNIG00000015421) #14	ANKDD1B (ENSTNIG00000015422) #15	ENSTNIG00000015423	sv2ca (ENSTNIG00000015424) #18	iqgap2 (ENSTNIG00000015425) ##20	f2r (ENSTNIG00000015426) #21	ENSTNIG00000015427	ENSTNIG00000015428	ENSTNIG00000015429	ssbp2a (ENSTNIG00000015430)	ENSTNIG00000000172	zgc:110626 (ENSTNIG00000001081)	ENSTNIG00000015431	tmem167a (ENSTNIG00000015432)	ENSTNIG00000015433	ENSTNIG00000015434	hapln1a (ENSTNIG00000000655)	ENSTNIG00000001606	hapln1a (ENSTNIG00000015435)	EDIL3 (ENSTNIG00000015436)	ENSTNIG00000001617
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00950000183049.E	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086
Zig-zag eel	MODERN SPECIES	23	JMY (ENSMAMG00000012948)	ENSMAMG00000012929	ENSMAMG00000012872	ENSMAMG00000012782	ENSMAMG00000012758	ENSMAMG00000012692	ENSMAMG00000012455	ENSMAMG00000012414	ENSMAMG00000012341 ##13	POLK (ENSMAMG00000012309) #14	ANKDD1B (ENSMAMG00000012272) #15	ENSMAMG00000012256	sv2ca (ENSMAMG00000012199) #18	F2RL2 (ENSMAMG00000025708) #19	iqgap2 (ENSMAMG00000012097) ##20	f2r (ENSMAMG00000012076) #21	ENSMAMG00000026420	ENSMAMG00000012056	ssbp2a (ENSMAMG00000012000)	ENSMAMG00000011958	ENSMAMG00000011985	ENSMAMG00000025750	ENSMAMG00000011925	ENSMAMG00000028361	ENSMAMG00000011866	ENSMAMG00000011859	TMEM167A (ENSMAMG00000011846)	ENSMAMG00000011814	ENSMAMG00000011767	ENSMAMG00000027965	EDIL3 (ENSMAMG00000011724)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00950000183049.E	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000156102.q.a.b	ENSGT00940000166906	ENSGT00940000158144.a	ENSGT00390000018086
Climbing perch	MODERN SPECIES	22	tent2 (ENSATEG00000005237)	homer1b (ENSATEG00000005201)	JMY (ENSATEG00000029857)	ENSATEG00000005098	ENSATEG00000005056	ENSATEG00000004958	ENSATEG00000004852	ENSATEG00000004842	ENSATEG00000004772 ##13	POLK (ENSATEG00000004665) #14	ANKDD1B (ENSATEG00000004652) #15	ENSATEG00000004644	sv2ca (ENSATEG00000004609) #18	F2RL2 (ENSATEG00000004583) #19	iqgap2 (ENSATEG00000004425) ##20	f2r (ENSATEG00000004415) #21	ENSATEG00000025398	ENSATEG00000004380	ssbp2a (ENSATEG00000004291)	ENSATEG00000004225	ENSATEG00000004259	ENSATEG00000004194	ENSATEG00000004172	TMEM167A (ENSATEG00000004151)	ENSATEG00000004128	ENSATEG00000004104	ENSATEG00000027621	ENSATEG00000004006	EDIL3 (ENSATEG00000004002)	ENSATEG00000029237	COX7C (ENSATEG00000026925)
Siamese fighting fish	MODERN SPECIES	20	homer1b (ENSBSLG00000004691)	JMY (ENSBSLG00000004682)	ENSBSLG00000004675	dimt1l (ENSBSLG00000004648)	kif2a (ENSBSLG00000004414)	unc45b (ENSBSLG00000004012)	unc45b (ENSBSLG00000003772)	ENSBSLG00000003652	cert1a (ENSBSLG00000002561) ##13	POLK (ENSBSLG00000002202) #14	ANKDD1B (ENSBSLG00000002159) #15	ENSBSLG00000002131	sv2ca (ENSBSLG00000002073) #18	F2RL2 (ENSBSLG00000002072) #19	iqgap2 (ENSBSLG00000002055) ##20	f2r (ENSBSLG00000002039) #21	ENSBSLG00000002036	ssbp2a (ENSBSLG00000001953)	ENSBSLG00000001926	ENSBSLG00000001924	ENSBSLG00000001923	ENSBSLG00000001918	ENSBSLG00000001913	ENSBSLG00000001906	tmem167a (ENSBSLG00000001903)	ENSBSLG00000001901	ENSBSLG00000001859	hapln1a (ENSBSLG00000001845)	EDIL3 (ENSBSLG00000001777)	cox7c (ENSBSLG00000001732)	RASA1 (ENSBSLG00000019594)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT01100000264020	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT01100000264020	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906
Barramundi perch	MODERN SPECIES	95	homer1b (ENSLCAG00010028113)	JMY (ENSLCAG00010028112)	ENSLCAG00010028111	ENSLCAG00010028110	dimt1l (ENSLCAG00010028109)	kif2a (ENSLCAG00010028085)	unc45b (ENSLCAG00010028058)	pip5k1bb (ENSLCAG00010028056)	cert1a (ENSLCAG00010028055) ##13	POLK (ENSLCAG00010028054) #14	ANKDD1B (ENSLCAG00010028053) #15	ENSLCAG00010028052	sv2ca (ENSLCAG00010028051) #18	F2RL2 (ENSLCAG00010028050) #19	iqgap2 (ENSLCAG00010028019) ##20	f2r (ENSLCAG00010027983) #21	ENSLCAG00010027982	ENSLCAG00010027981	ENSLCAG00010027980	ssbp2a (ENSLCAG00010027964)	ENSLCAG00010027962	ENSLCAG00010027961	ENSLCAG00010027959	ENSLCAG00010027947	ENSLCAG00010027944	ENSLCAG00010027942	tmem167a (ENSLCAG00010027939)	ENSLCAG00010027937	ENSLCAG00010027930	hapln1a (ENSLCAG00010027925)	EDIL3 (ENSLCAG00010027924)
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a.e	ENSGT01100000264020	ENSGT00940000164012.C.i.a.f	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a
Greater amberjack	MODERN SPECIES	6	JMY (ENSSDUG00000015420)	ENSSDUG00000015434	ENSSDUG00000015446	ENSSDUG00000015478	dimt1l (ENSSDUG00000015494)	kif2a (ENSSDUG00000015538)	unc45b (ENSSDUG00000015695)	pip5k1bb (ENSSDUG00000015733)	ENSSDUG00000015802 ##13	POLK (ENSSDUG00000015878) #14	ANKDD1B (ENSSDUG00000015937) #15	ENSSDUG00000015960	sv2ca (ENSSDUG00000015984) #18	iqgap2 (ENSSDUG00000016017) ##20	F2RL2 (ENSSDUG00000016076) #19	f2r (ENSSDUG00000016084) #21	ENSSDUG00000016094	ENSSDUG00000016112	ENSSDUG00000016123	ssbp2a (ENSSDUG00000016131)	ENSSDUG00000016157	ENSSDUG00000016171	ENSSDUG00000016187	ENSSDUG00000016240	ENSSDUG00000016255	ENSSDUG00000016266	ENSSDUG00000016276	tmem167a (ENSSDUG00000016282)	ENSSDUG00000016293	ENSSDUG00000016328	hapln1a (ENSSDUG00000016379)
Yellowtail amberjack	MODERN SPECIES	2916	homer1b (ENSSLDG00000003016)	ENSSLDG00000003068	ENSSLDG00000003089	ENSSLDG00000003137	dimt1l (ENSSLDG00000003157)	kif2a (ENSSLDG00000003248)	unc45b (ENSSLDG00000003454)	pip5k1bb (ENSSLDG00000003558)	cert1a (ENSSLDG00000003668) ##13	POLK (ENSSLDG00000003774) #14	ANKDD1B (ENSSLDG00000003792) #15	ENSSLDG00000003836	sv2ca (ENSSLDG00000003873) #18	iqgap2 (ENSSLDG00000003922) ##20	F2RL2 (ENSSLDG00000004246) #19	f2r (ENSSLDG00000004302) #21	ENSSLDG00000004292	ENSSLDG00000004312	ENSSLDG00000004324	ssbp2a (ENSSLDG00000004452)	ENSSLDG00000004981	zgc:110626 (ENSSLDG00000005020)	ENSSLDG00000005095	ENSSLDG00000005112	ENSSLDG00000005139	ENSSLDG00000005167	tmem167a (ENSSLDG00000005182)	ENSSLDG00000005203	ENSSLDG00000005246	hapln1a (ENSSLDG00000005319)
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d	ENSGT00390000003122.b	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654.f	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.a.a	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000165930.A	ENSGT00940000166014	ENSGT00940000155186	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000166906	ENSGT00940000158144.a
Tongue sole	MODERN SPECIES	398	gnb1l (ENSCSEG00000011681)	tbx1 (ENSCSEG00000011695)	sema4c (ENSCSEG00000011709)	ENSCSEG00000011724	ENSCSEG00000011733	ENSCSEG00000011745	ENSCSEG00000011752	pip5k1bb (ENSCSEG00000011758)	cert1a (ENSCSEG00000011782) ##13	ENSCSEG00000011839	POLK (ENSCSEG00000011846) #14	ANKDD1B (ENSCSEG00000011882) #15	ENSCSEG00000011897	sv2ca (ENSCSEG00000011905) #18	iqgap2 (ENSCSEG00000011933) ##20	f2r (ENSCSEG00000012046) #21	ENSCSEG00000012048	ssbp2a (ENSCSEG00000012055)	ENSCSEG00000012080	ENSCSEG00000012086	ENSCSEG00000012099	ENSCSEG00000012108	ENSCSEG00000012114	tmem167a (ENSCSEG00000012117)	ENSCSEG00000012123	ENSCSEG00000012133	ENSCSEG00000012143	klf9 (ENSCSEG00000012162)	fam219ab (ENSCSEG00000012169)	ENSCSEG00000012181	adrb3a (ENSCSEG00000012194)
Turbot	MODERN SPECIES	21	homer1b (ENSSMAG00000010206)	JMY (ENSSMAG00000010198)	ENSSMAG00000010154	ENSSMAG00000010188	ENSSMAG00000010122	ENSSMAG00000010059	ENSSMAG00000009995	ENSSMAG00000009937	ENSSMAG00000009873 ##13	POLK (ENSSMAG00000009824) #14	ANKDD1B (ENSSMAG00000009792) #15	ENSSMAG00000009748	sv2ca (ENSSMAG00000009687) #18	F2RL2 (ENSSMAG00000009659) #19	iqgap2 (ENSSMAG00000009436) ##20	f2r (ENSSMAG00000033731) #21	ENSSMAG00000027594	ENSSMAG00000009417	ENSSMAG00000009398	ssbp2a (ENSSMAG00000009366)	ENSSMAG00000009356	ENSSMAG00000009338	ENSSMAG00000009278	ENSSMAG00000009256	ENSSMAG00000009236	ENSSMAG00000033038	ENSSMAG00000027869	TMEM167A (ENSSMAG00000009194)	ENSSMAG00000009177	ENSSMAG00000009163	ENSSMAG00000035326
Pinecone sodierfish	MODERN SPECIES	23	ENSMMDG00005008444	ENSMMDG00005008436	dimt1l (ENSMMDG00005008433)	ENSMMDG00005008429	kif2a (ENSMMDG00005006130)	ENSMMDG00005006078	unc45b (ENSMMDG00005006070)	pip5k1bb (ENSMMDG00005004289)	cert1a (ENSMMDG00005023857) ##13	POLK (ENSMMDG00005023849) #14	ANKDD1B (ENSMMDG00005023846) #15	ENSMMDG00005023845	sv2ca (ENSMMDG00005023842) #18	F2RL2 (ENSMMDG00005023840) #19	iqgap2 (ENSMMDG00005017661) ##20	f2r (ENSMMDG00005017448) #21	ENSMMDG00005017447	zgc:110626 (ENSMMDG00005017445)	ENSMMDG00005017444	ENSMMDG00005017442	ENSMMDG00005017441	tmem167a (ENSMMDG00005017440)	ENSMMDG00005017438	ENSMMDG00005017437	hapln1a (ENSMMDG00005017418)	EDIL3 (ENSMMDG00005017415)	cox7c (ENSMMDG00005017412)	RASA1 (ENSMMDG00005014548)	ccnh (ENSMMDG00005014495)	tmem161b (ENSMMDG00005014478)	mef2cb (ENSMMDG00005014452)
Cod	MODERN SPECIES	19	HOMER1 (ENSGMOG00000029081)	JMY (ENSGMOG00000010750)	ENSGMOG00000010765	ENSGMOG00000010781	ENSGMOG00000010801	ENSGMOG00000010819	ENSGMOG00000010844	ENSGMOG00000010866	ENSGMOG00000010878 ##13	POLK (ENSGMOG00000010897) #14	ANKDD1B (ENSGMOG00000010928) #15	ENSGMOG00000010940	sv2ca (ENSGMOG00000010961) #18	iqgap2 (ENSGMOG00000010974) ##20	F2RL2 (ENSGMOG00000032744) #19	f2r (ENSGMOG00000011006) #21	ssbp2a (ENSGMOG00000011029)	ENSGMOG00000036026	ENSGMOG00000026305	ENSGMOG00000011055	ENSGMOG00000011069	TMEM167A (ENSGMOG00000033366)	ENSGMOG00000027751	ENSGMOG00000016422	ENSGMOG00000028069	ENSGMOG00000011145	EDIL3 (ENSGMOG00000018919)	ENSGMOG00000022366	ENSGMOG00000031424	COX7C (ENSGMOG00000000506)	RASA1 (ENSGMOG00000000513)
Protacanthopterygii	ANCESTRAL SPECIES	78	ENSGT00940000162045.m	ENSGT00390000017443	ENSGT00980000202325	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s	ENSGT00940000157654	ENSGT00940000156639.c	ENSGT00940000155123.a ##13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b.e #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT00950000183049.E	ENSGT00940000164012.B	ENSGT00550000074856.c.b	ENSGT00950000183166.a.b	ENSGT00940000162822	ENSGT00940000158930	ENSGT00950000182937.A.b	ENSGT00950000182869.e.b.g.a	ENSGT00940000153866.B	ENSGT00940000156918	ENSGT00390000000378.d.b	ENSGT00390000001618.s	ENSGT01100000263793	ENSGT00390000003682
Salmoninae	ANCESTRAL SPECIES	77	ENSGT00940000158739.c.d	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000162045.m	ENSGT00390000017443.nb.a	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s.h	ENSGT00940000157654.h	ENSGT00940000156639.c.d	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156667.o.a #14	ENSGT00940000154170.A.c #15	ENSGT00950000182940.b.b.e.d #18	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.b.b.a.d #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b.b	ENSGT00950000183049.E.c	ENSGT00940000164012.B	ENSGT00550000074856.c.b.f.b.b	ENSGT00950000183166.a.b.f	ENSGT00940000155715.nb.a	ENSGT00940000162822	ENSGT00940000159038.a.a.d	ENSGT00940000158930.f	ENSGT00950000182937.A.b.g	ENSGT00950000182869.e.b.g.a.f	ENSGT00940000153866.B	ENSGT00940000156918.j	ENSGT00390000001618.s	ENSGT00390000000378.d.b.wb
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00940000158739.c.d	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000162045.m	ENSGT00390000017443.nb.a	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s.h	ENSGT00940000157654.h	ENSGT00940000156639.c.d	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156667.o.a #14	ENSGT00940000154170.A.c #15	ENSGT00950000182940.b.b.e.d #18	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.b.b.a.d #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b.b	ENSGT00950000183049.E.c	ENSGT00940000164012.B	ENSGT00550000074856.c.b.f.b.b	ENSGT00950000183166.a.b.f	ENSGT00940000162822	ENSGT00940000159038.a.a.d	ENSGT00940000158930.f	ENSGT00950000182937.A.b.g	ENSGT00950000182869.e.b.g.a.f	ENSGT00940000153866.B	ENSGT00940000156918.j	ENSGT00390000000378.d.b.wb	ENSGT00390000001618.s	ENSGT00390000003682.f
Salmo	ANCESTRAL SPECIES	19	ENSGT00940000158739.c.d	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000162045.m	ENSGT00390000017443.nb.a	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s.h	ENSGT00940000157654.h	ENSGT00940000156639.c.d	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156667.o.a.a.a #14	ENSGT00940000154170.A.c #15	ENSGT00950000182940.b.b.e.d #18	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.b.b.a.d #19	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b.b	ENSGT00950000183049.E.c	ENSGT00940000164012.B	ENSGT00550000074856.c.b.f.b.b	ENSGT00950000183166.a.b.f	ENSGT00940000162822.c	ENSGT00940000159038.a.a.d	ENSGT00940000158930.f	ENSGT00950000182937.A.b.g	ENSGT00950000182869.e.b.g.a.f	ENSGT00940000153866.B	ENSGT00940000156918.j	ENSGT00390000000378.d.b.wb	ENSGT00390000001618.s	ENSGT00390000003682.f
Atlantic salmon	MODERN SPECIES	12	mrps36 (ENSSSAG00000072443)	cenph (ENSSSAG00000112366)	dimt1l (ENSSSAG00000072447)	ENSSSAG00000072496	ENSSSAG00000074349	ENSSSAG00000075021	ENSSSAG00000075092 ##13	ENSSSAG00000081888 #14	ENSSSAG00000091328 #14	ENSSSAG00000105950 #14	ANKDD1B (ENSSSAG00000076161) #15	sv2ca (ENSSSAG00000066054) #18	iqgap2 (ENSSSAG00000076293) ##20	F2RL2 (ENSSSAG00000079337) #19	ENSSSAG00000079344	f2r (ENSSSAG00000079339) #21	ssbp2a (ENSSSAG00000079361)	ENSSSAG00000079540	ENSSSAG00000091439	ENSSSAG00000118287	ENSSSAG00000042487	ENSSSAG00000116451	ENSSSAG00000080266	ENSSSAG00000080273	ikbkb (ENSSSAG00000045104)	vdac3 (ENSSSAG00000045635)	ENSSSAG00000045940	enkd1 (ENSSSAG00000045950)	polb (ENSSSAG00000045962)	dynll1 (ENSSSAG00000046028)	ENSSSAG00000046044
River trout	MODERN SPECIES	39	plk2b (ENSSTUG00000030883)	mier3b (ENSSTUG00000031125)	ENSSTUG00000031264	mrps36 (ENSSTUG00000031274)	cenph (ENSSTUG00000031297)	dimt1l (ENSSTUG00000031341)	kif2a (ENSSTUG00000031403)	unc45b (ENSSTUG00000031804)	pip5k1bb (ENSSTUG00000032466)	cert1a (ENSSTUG00000032571) ##13	POLK (ENSSTUG00000032681) #14	ANKDD1B (ENSSTUG00000032800) #15	sv2ca (ENSSTUG00000032844) #18	iqgap2 (ENSSTUG00000033102) ##20	F2RL2 (ENSSTUG00000046100) #19	f2r (ENSSTUG00000046110) #21	ENSSTUG00000046112	ssbp2a (ENSSTUG00000046136)	ENSSTUG00000046350	ENSSTUG00000046352	SLC25A1 (ENSSTUG00000046375)	ENSSTUG00000046488	ENSSTUG00000047645	PLAT (ENSSTUG00000047668)	ikbkb (ENSSTUG00000047760)	vdac3 (ENSSTUG00000047951)	ENSSTUG00000047958	ENSSTUG00000047963	enkd1 (ENSSTUG00000047975)	polb (ENSSTUG00000047986)	dynll1 (ENSSTUG00000048021)
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00940000158739.c.d	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000162045.m	ENSGT00390000017443.nb.a	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s.h	ENSGT00940000157654.h	ENSGT00940000156639.c.d	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156667.o.a #14	ENSGT00940000154170.A.c #15	ENSGT00950000182940.b.b.e.d #18	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b.b	ENSGT00950000183049.E.c	ENSGT00940000164012.B	ENSGT00550000074856.c.b.f.b.b	ENSGT00950000183166.a.b.f	ENSGT00940000159038.a.a.d	ENSGT00940000158930.f	ENSGT00950000182937.A.b.g	ENSGT00950000182869.e.b.g.a.f	ENSGT00940000153866.B	ENSGT00940000156918.j	ENSGT00390000001618.s	ENSGT00390000000378.d.b.wb	ENSGT00390000003682.f	ENSGT01030000234626.D.d
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00940000158739.c.d	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000162045.m	ENSGT00390000017443.nb.a	ENSGT00390000009578	ENSGT00950000183142.a.a	ENSGT00940000155570.s.h	ENSGT00940000157654.h	ENSGT00940000156639.c.d	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156667.o.a #14	ENSGT00940000154170.A.c #15	ENSGT00950000182940.b.b.e.d #18	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b.b	ENSGT00950000183049.E.c	ENSGT00940000164012.B	ENSGT00550000074856.c.b.e	ENSGT00950000183166.a.b.f	ENSGT00940000159038.a.a.d	ENSGT00940000158930.f	ENSGT00950000182937.A.b.g	ENSGT00950000182937.A.b.h	ENSGT00950000182869.e.b.g.a.f	ENSGT00940000153866.B	ENSGT00940000156918.j	ENSGT00390000000378.d.b.wb	ENSGT00390000001618.s	ENSGT00390000003682.f
Coho salmon	MODERN SPECIES	28	mier3b (ENSOKIG00005046913)	ENSOKIG00005046900	mrps36 (ENSOKIG00005046881)	cenph (ENSOKIG00005046876)	dimt1l (ENSOKIG00005046859)	kif2a (ENSOKIG00005045320)	ENSOKIG00005045152	UNC45B (ENSOKIG00005044260)	ENSOKIG00005043722	ENSOKIG00005043297 ##13	POLK (ENSOKIG00005043189) #14	ANKDD1B (ENSOKIG00005043163) #15	sv2ca (ENSOKIG00005043125) #18	F2RL2 (ENSOKIG00005043111) #19	iqgap2 (ENSOKIG00005033003) ##20	f2r (ENSOKIG00005032517) #21	ssbp2a (ENSOKIG00005032358)	ENSOKIG00005032326	SLC25A1 (ENSOKIG00005032108)	ENSOKIG00005031734	MYL11 (ENSOKIG00005031681)	PLAT (ENSOKIG00005031157)	ikbkb (ENSOKIG00005031084)	enkd1 (ENSOKIG00005031069)	polb (ENSOKIG00005031009)	dynll1 (ENSOKIG00005030993)	ENSOKIG00005030971	ENSOKIG00005021362	ACAA2 (ENSOKIG00005021234)	mrpl40 (ENSOKIG00005021192)	ufd1l (ENSOKIG00005020942)
Chinook salmon	MODERN SPECIES	3	mier3b (ENSOTSG00005040608)	ENSOTSG00005040606	mrps36 (ENSOTSG00005040604)	cenph (ENSOTSG00005040601)	dimt1l (ENSOTSG00005040587)	kif2a (ENSOTSG00005035478)	unc45b (ENSOTSG00005032234)	pip5k1bb (ENSOTSG00005030677)	ENSOTSG00005030366 ##13	POLK (ENSOTSG00005030353) #14	ANKDD1B (ENSOTSG00005030345) #15	sv2ca (ENSOTSG00005030297) #18	F2RL2 (ENSOTSG00005030295) #19	ENSOTSG00005030294	iqgap2 (ENSOTSG00005011628) ##20	f2r (ENSOTSG00005011592) #21	ENSOTSG00005011591	ssbp2a (ENSOTSG00005011590)	ENSOTSG00005011589	SLC25A1 (ENSOTSG00005011588)	ENSOTSG00005011587	MYL11 (ENSOTSG00005011585)	PLAT (ENSOTSG00005011584)	ikbkb (ENSOTSG00005011560)	ENSOTSG00005011554	fstl1b (ENSOTSG00005011162)	LRRC58 (ENSOTSG00005011160)	GPR156 (ENSOTSG00005011159)	ENSOTSG00005011158	ENSOTSG00005011157	vdac3 (ENSOTSG00005011150)
Rainbow trout	MODERN SPECIES	2	cenph (ENSOMYG00000015326)	dimt1l (ENSOMYG00000015329)	ENSOMYG00000015394	ENSOMYG00000015919	ENSOMYG00000061519	ENSOMYG00000017425	ENSOMYG00000017692 ##13	POLK (ENSOMYG00000019391) #14	ANKDD1B (ENSOMYG00000019440) #15	ENSOMYG00000063359	ENSOMYG00000076290	sv2ca (ENSOMYG00000019477) #18	iqgap2 (ENSOMYG00000019870) ##20	ENSOMYG00000022059	F2RL2 (ENSOMYG00000022061) #19	f2r (ENSOMYG00000022067) #21	ssbp2a (ENSOMYG00000022113)	ENSOMYG00000022133	ENSOMYG00000022163	ENSOMYG00000022635	ENSOMYG00000070104	ENSOMYG00000023571	ENSOMYG00000059437	ENSOMYG00000024299	vdac3 (ENSOMYG00000025689)	ENSOMYG00000053738	enkd1 (ENSOMYG00000025783)	polb (ENSOMYG00000025879)	ENSOMYG00000026022	dynll1 (ENSOMYG00000026005)	rpl6 (ENSOMYG00000026034)
Huchen	MODERN SPECIES	304															iqgap2 (ENSHHUG00000022687) ##20	f2r (ENSHHUG00000022667) #21	ENSHHUG00000022663	ssbp2a (ENSHHUG00000022534)	ENSHHUG00000022525	SLC25A1 (ENSHHUG00000022500)	ENSHHUG00000022440	ENSHHUG00000022416	mylpfb (ENSHHUG00000022413)	PLAT (ENSHHUG00000022402)	ikbkb (ENSHHUG00000022121)	vdac3 (ENSHHUG00000021989)	enkd1 (ENSHHUG00000021976)	ENSHHUG00000021972	dynll1 (ENSHHUG00000021966)	ENSHHUG00000021962	rpl6 (ENSHHUG00000021934)
Northern pike	MODERN SPECIES	12	mier3b (ENSELUG00000010763)	ENSELUG00000010724	mrps36 (ENSELUG00000010716)	cenph (ENSELUG00000010653)	dimt1 (ENSELUG00000010568)	kif2a (ENSELUG00000010457)	unc45b (ENSELUG00000010405)	pip5k1bb (ENSELUG00000010355)	cert1a (ENSELUG00000010291) ##13	POLK (ENSELUG00000010184) #14	ANKDD1B (ENSELUG00000010168) #15	ENSELUG00000010115	sv2ca (ENSELUG00000010070) #18	F2RL2 (ENSELUG00000009878) #19	iqgap2 (ENSELUG00000009998) ##20	f2r (ENSELUG00000009872) #21	ENSELUG00000033572	ENSELUG00000027802	ssbp2a (ENSELUG00000009831)	SLC25A1 (ENSELUG00000009778)	CLTCL1 (ENSELUG00000009702)	ENSELUG00000009557	PLAT (ENSELUG00000009537)	ikbkb (ENSELUG00000009472)	vdac3 (ENSELUG00000009417)	enkd1 (ENSELUG00000009383)	polb (ENSELUG00000009370)	ENSELUG00000009356	dynll1 (ENSELUG00000009336)	rpl6 (ENSELUG00000009354)	acaa2 (ENSELUG00000009312)
Clupeocephala	ANCESTRAL SPECIES	160	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00510000047710	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00940000170540	ENSGT00940000159952.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00990000209055	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Tiger tail seahorse	MODERN SPECIES	547												ENSHCOG00000010964	CERT1 (ENSHCOG00000011013) #13	SV2C (ENSHCOG00000011047) #18	F2RL2 (ENSHCOG00000011054) #19	f2r2.1 (ENSHCOG00000011058) #21	f2rl1.2 (ENSHCOG00000011067) #22	ch25hl2 (ENSHCOG00000011084)	s100z (ENSHCOG00000011089) #23	crhbp (ENSHCOG00000011105) #24
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Mangrove rivulus	MODERN SPECIES	149			ADAMTS6 (ENSKMAG00000011498)	cwc27 (ENSKMAG00000011570)	ppwd1 (ENSKMAG00000011602)	trim23 (ENSKMAG00000011663)	mzt2b (ENSKMAG00000011725)	ENSKMAG00000011767	lhx5 (ENSKMAG00000011869)	GCNT4 (ENSKMAG00000011886) #10	hmgcrb (ENSKMAG00000011914) #12	CERT1 (ENSKMAG00000012022) #13	SV2C (ENSKMAG00000012134) #18	ENSKMAG00000012156	F2RL2 (ENSKMAG00000012168) #19	f2r2.1 (ENSKMAG00000012181) #21	f2rl1.1 (ENSKMAG00000012189) #22	f2rl1.2 (ENSKMAG00000012201) #22	ch25hl2 (ENSKMAG00000012213)	s100z (ENSKMAG00000012227) #23	crhbp (ENSKMAG00000012248) #24
Turquoise killifish	MODERN SPECIES	1611	LIN54 (ENSNFUG00015008673)	cops4 (ENSNFUG00015008730)	plac8.1 (ENSNFUG00015008759)	ENSNFUG00015008765	ADAMTS6 (ENSNFUG00015008782)	cwc27 (ENSNFUG00015008838)	ppwd1 (ENSNFUG00015008872)	trim23 (ENSNFUG00015009218)	mzt2b (ENSNFUG00015009462)	lhx5 (ENSNFUG00015009471)	GCNT4 (ENSNFUG00015009486) #10	HMGCRB (ENSNFUG00015009514) #12	COL4A3BP (ENSNFUG00015009754) #13	SV2C (ENSNFUG00015010761) #18	F2RL2 (ENSNFUG00015010814) #19	Nfu_g_1_006533 (ENSNFUG00015010823) #21	f2rl1.1 (ENSNFUG00015010828) #22	F2RL1.2 (ENSNFUG00015010834) #22	ch25hl2 (ENSNFUG00015010842)	S100Z (ENSNFUG00015010858) #23	CRHBP (ENSNFUG00015003890) #24	PDE8B (ENSNFUG00015003954) #27	WDR41 (ENSNFUG00015004234) #28	OTPB (ENSNFUG00015004263) #29	tbca (ENSNFUG00015004274) #30	AP3B1 (ENSNFUG00015004371) #31	Nfu_g_1_006313 (ENSNFUG00015004582) #33	LHFPL2A (ENSNFUG00015004591) #34	ARSB (ENSNFUG00015004599) #36	DMGDH (ENSNFUG00015004648) #37	bhmt (ENSNFUG00015005047)
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
NAME_4	ANCESTRAL SPECIES		ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Mummichog	MODERN SPECIES	2267	lin54 (ENSFHEG00000006513)	cops4 (ENSFHEG00000006500)	plac8.1 (ENSFHEG00000006414)	ADAMTS6 (ENSFHEG00000006381)	cwc27 (ENSFHEG00000006320)	ppwd1 (ENSFHEG00000006293)	trim23 (ENSFHEG00000000170)	mzt2b (ENSFHEG00000006201)	lhx5 (ENSFHEG00000006182)	ENSFHEG00000006150	GCNT4 (ENSFHEG00000006132) #10	hmgcrb (ENSFHEG00000006120) #12	CERT1 (ENSFHEG00000006058) #13	SV2C (ENSFHEG00000005978) #18	F2RL2 (ENSFHEG00000005955) #19	f2r2.1 (ENSFHEG00000000158) #21	f2rl1.1 (ENSFHEG00000005947) #22	f2rl1.2 (ENSFHEG00000005941) #22	ch25hl2 (ENSFHEG00000005932)	s100z (ENSFHEG00000005920) #23	crhbp (ENSFHEG00000005908) #24	PDE8B (ENSFHEG00000005895) #27	wdr41 (ENSFHEG00000005844) #28	otpa (ENSFHEG00000000677) #29	tbca (ENSFHEG00000005810) #30
Sheepshead minnow	MODERN SPECIES	404										lhx5 (ENSCVAG00000013138)	GCNT4 (ENSCVAG00000013140) #10	hmgcrb (ENSCVAG00000013227) #12	CERT1 (ENSCVAG00000013343) #13	SV2C (ENSCVAG00000013393) #18	F2RL2 (ENSCVAG00000013402) #19	f2r2.1 (ENSCVAG00000013411) #21	f2rl1.1 (ENSCVAG00000013419) #22	f2rl1.2 (ENSCVAG00000013422) #22	ch25hl2 (ENSCVAG00000013436)	s100z (ENSCVAG00000013443) #23	ENSCVAG00000013475	ENSCVAG00000000344	itgb1b (ENSCVAG00000013623)	NRP1 (ENSCVAG00000013684)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Poecilia	ANCESTRAL SPECIES	12	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
NAME_6	ANCESTRAL SPECIES	13	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155567	ENSGT00390000012762	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00940000168653.b	ENSGT00390000015280	ENSGT00940000159721.h.a #10	ENSGT00940000155305.b.b.c #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Sailfin molly	MODERN SPECIES	502														SV2C (ENSPLAG00000011754) #18	F2RL2 (ENSPLAG00000011769) #19	f2r2.1 (ENSPLAG00000011774) #21	f2rl1.1 (ENSPLAG00000011776) #22	f2rl1.2 (ENSPLAG00000011780) #22	ch25hl2 (ENSPLAG00000011801)	s100z (ENSPLAG00000011835) #23	crhbp (ENSPLAG00000011943) #24	PDE8B (ENSPLAG00000012008) #27	wdr41 (ENSPLAG00000012032) #28	otpa (ENSPLAG00000012052) #29	tbca (ENSPLAG00000012073) #30	AP3B1 (ENSPLAG00000012095) #31	scamp1 (ENSPLAG00000012134) #33	lhfpl2a (ENSPLAG00000012161) #34	ARSB (ENSPLAG00000012289) #36
Amazon molly	MODERN SPECIES	280	zgc:162472 (ENSPFOG00000010452)	ENSPFOG00000023269	ENSPFOG00000010387	arid6 (ENSPFOG00000022560)	ENSPFOG00000023715	unc5da (ENSPFOG00000009678)	tnfrsfa (ENSPFOG00000009564)	ENSPFOG00000022291	trappc13 (ENSPFOG00000009469)	ENSPFOG00000024112	GCNT4 (ENSPFOG00000020252) #10	hmgcrb (ENSPFOG00000009328) #12	CERT1 (ENSPFOG00000009132) #13	SV2C (ENSPFOG00000009066) #18	F2RL2 (ENSPFOG00000009061) #19	f2r2.1 (ENSPFOG00000009051) #21	f2rl1.1 (ENSPFOG00000020251) #22	f2rl1.2 (ENSPFOG00000020250) #22	ch25hl2 (ENSPFOG00000020249)	s100z (ENSPFOG00000009037) #23	crhbp (ENSPFOG00000008990) #24	PDE8B (ENSPFOG00000008456) #27	PDE8B (ENSPFOG00000022318) #27	wdr41 (ENSPFOG00000008295) #28	ENSPFOG00000008261	tbca (ENSPFOG00000008215) #30	AP3B1 (ENSPFOG00000008022) #31	scamp1 (ENSPFOG00000007907) #33	lhfpl2a (ENSPFOG00000007888) #34	ARSB (ENSPFOG00000007724) #36	DMGDH (ENSPFOG00000007360) #37
Guppy	MODERN SPECIES	442	lin54 (ENSPREG00000018198)	cops4 (ENSPREG00000018229)	plac8.1 (ENSPREG00000018260)	ADAMTS6 (ENSPREG00000018308)	ENSPREG00000018347	cwc27 (ENSPREG00000018364)	ppwd1 (ENSPREG00000018430)	trim23 (ENSPREG00000018458)	mzt2b (ENSPREG00000018479)	lhx5 (ENSPREG00000018491)	GCNT4 (ENSPREG00000018502) #10	hmgcrb (ENSPREG00000018525) #12	CERT1 (ENSPREG00000018596) #13	SV2C (ENSPREG00000018654) #18	F2RL2 (ENSPREG00000018676) #19	f2r2.1 (ENSPREG00000018683) #21	f2rl1.1 (ENSPREG00000018692) #22	f2rl1.2 (ENSPREG00000018699) #22	ENSPREG00000018708	ch25hl2 (ENSPREG00000018722)	s100z (ENSPREG00000018742) #23	crhbp (ENSPREG00000018766) #24	PDE8B (ENSPREG00000018782) #27	wdr41 (ENSPREG00000018815) #28	otpa (ENSPREG00000018848) #29	ENSPREG00000018858	AP3B1 (ENSPREG00000018892) #31	scamp1 (ENSPREG00000018981) #33	lhfpl2a (ENSPREG00000019023) #34	ARSB (ENSPREG00000019046) #36	DMGDH (ENSPREG00000019090) #37
Platyfish	MODERN SPECIES	22	cops4 (ENSXMAG00000019092)	plac8.1 (ENSXMAG00000021018)	ADAMTS6 (ENSXMAG00000019046)	ENSXMAG00000028220	cwc27 (ENSXMAG00000019028)	ppwd1 (ENSXMAG00000019013)	trim23 (ENSXMAG00000019005)	mzt2b (ENSXMAG00000019000)	lhx5 (ENSXMAG00000025364)	GCNT4 (ENSXMAG00000023542) #10	ENSXMAG00000029435	hmgcrb (ENSXMAG00000018982) #12	CERT1 (ENSXMAG00000018963) #13	SV2C (ENSXMAG00000018926) #18	F2RL2 (ENSXMAG00000018925) #19	f2r2.1 (ENSXMAG00000018922) #21	f2rl1.1 (ENSXMAG00000018920) #22	f2rl1.2 (ENSXMAG00000022315) #22	ch25hl2 (ENSXMAG00000019422)	s100z (ENSXMAG00000018916) #23	crhbp (ENSXMAG00000018907) #24	PDE8B (ENSXMAG00000018842) #27	wdr41 (ENSXMAG00000018834) #28	otpa (ENSXMAG00000029861) #29	tbca (ENSXMAG00000024381) #30	AP3B1 (ENSXMAG00000018805) #31	scamp1 (ENSXMAG00000028164) #33	lhfpl2a (ENSXMAG00000018753) #34	ARSB (ENSXMAG00000018745) #36	DMGDH (ENSXMAG00000018724) #37	bhmt (ENSXMAG00000024462)
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.e #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Javanese ricefish	MODERN SPECIES	3	sec31a (ENSOJAG00000008250)	lin54 (ENSOJAG00000008114)	cops4 (ENSOJAG00000008081)	plac8.1 (ENSOJAG00000008053)	ADAMTS6 (ENSOJAG00000007539)	cwc27 (ENSOJAG00000007407)	ppwd1 (ENSOJAG00000007397)	trim23 (ENSOJAG00000007342)	mzt2b (ENSOJAG00000007325)	lhx5 (ENSOJAG00000007311)	GCNT4 (ENSOJAG00000007303) #10	hmgcrb (ENSOJAG00000007200) #12	CERT1 (ENSOJAG00000007089) #13	SV2C (ENSOJAG00000006583) #18	F2RL2 (ENSOJAG00000006540) #19	f2r2.1 (ENSOJAG00000006533) #21	f2rl1.1 (ENSOJAG00000006526) #22	f2rl1.2 (ENSOJAG00000006457) #22	ch25hl2 (ENSOJAG00000006368)	s100z (ENSOJAG00000006352) #23	crhbp (ENSOJAG00000006339) #24	PDE8B (ENSOJAG00000006231) #27	wdr41 (ENSOJAG00000005989) #28	otpa (ENSOJAG00000005941) #29	tbca (ENSOJAG00000021072) #30	AP3B1 (ENSOJAG00000021042) #31	scamp1 (ENSOJAG00000021017) #33	ENSOJAG00000021004	lhfpl2a (ENSOJAG00000020996) #34	ARSB (ENSOJAG00000020969) #36	DMGDH (ENSOJAG00000020352) #37
Indian medaka	MODERN SPECIES	30	lin54 (ENSOMEG00000018289)	cops4 (ENSOMEG00000000468)	ENSOMEG00000018208	ADAMTS6 (ENSOMEG00000018187)	cwc27 (ENSOMEG00000018078)	ENSOMEG00000018032	ppwd1 (ENSOMEG00000017997)	trim23 (ENSOMEG00000017937)	mzt2b (ENSOMEG00000017910)	lhx5 (ENSOMEG00000017880)	hmgcrb (ENSOMEG00000017841) #12	GCNT4 (ENSOMEG00000017718) #10	CERT1 (ENSOMEG00000017675) #13	SV2C (ENSOMEG00000000862) #18	F2RL2 (ENSOMEG00000017449) #19	f2r2.1 (ENSOMEG00000017436) #21	f2rl1.1 (ENSOMEG00000017425) #22	f2rl1.2 (ENSOMEG00000017412) #22	ch25hl2 (ENSOMEG00000017408)	s100z (ENSOMEG00000017389) #23	crhbp (ENSOMEG00000017356) #24	PDE8B (ENSOMEG00000017299) #27	wdr41 (ENSOMEG00000017120) #28	otpa (ENSOMEG00000017048) #29	ENSOMEG00000017042	AP3B1 (ENSOMEG00000017029) #31	scamp1 (ENSOMEG00000016923) #33	lhfpl2a (ENSOMEG00000016802) #34	bhmt (ENSOMEG00000016763)	ARSB (ENSOMEG00000016709) #36	ENSOMEG00000016612 #37
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000180550	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000181707	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Chinese medaka	MODERN SPECIES	753	tia1 (ENSOSIG00000017744)	DTWD2 (ENSOSIG00000017832)	HOMER1 (ENSOSIG00000017839)	JMY (ENSOSIG00000017853)	bhmt (ENSOSIG00000017866)	DMGDH (ENSOSIG00000017872) #37	ARSB (ENSOSIG00000017895) #36	lhfpl2a (ENSOSIG00000017898) #34	scamp1 (ENSOSIG00000017901) #33	AP3B1 (ENSOSIG00000017913) #31	tbca (ENSOSIG00000017957) #30	otpa (ENSOSIG00000017960) #29	crhbp (ENSOSIG00000017963) #24	SV2C (ENSOSIG00000017982) #18	F2RL2 (ENSOSIG00000018032) #19	f2r2.1 (ENSOSIG00000018033) #21	f2rl1.1 (ENSOSIG00000018034) #22	f2rl1.2 (ENSOSIG00000018038) #22	ch25hl2 (ENSOSIG00000018039)	s100z (ENSOSIG00000018041) #23
Japanese Medaka HdrR	MODERN SPECIES	3	cops4 (ENSORLG00000001924)	plac8.1 (ENSORLG00000024268)	ENSORLG00000025212	ADAMTS6 (ENSORLG00000001971)	cwc27 (ENSORLG00000001991)	ENSORLG00000030025	ppwd1 (ENSORLG00000002002)	trim23 (ENSORLG00000002016)	mzt2b (ENSORLG00000002030)	lhx5 (ENSORLG00000002044)	GCNT4 (ENSORLG00000002049) #10	hmgcrb (ENSORLG00000002060) #12	CERT1 (ENSORLG00000002149) #13	SV2C (ENSORLG00000002175) #18	F2RL2 (ENSORLG00000029096) #19	f2r2.1 (ENSORLG00000023591) #21	f2rl1.1 (ENSORLG00000022298) #22	f2rl1.2 (ENSORLG00000002198) #22	ch25hl2 (ENSORLG00000002205)	s100z (ENSORLG00000030634) #23	crhbp (ENSORLG00000002228) #24	PDE8B (ENSORLG00000002273) #27	wdr41 (ENSORLG00000002299) #28	otpa (ENSORLG00000022528) #29	tbca (ENSORLG00000022186) #30	AP3B1 (ENSORLG00000002365) #31	scamp1 (ENSORLG00000002381) #33	lhfpl2a (ENSORLG00000002386) #34	ARSB (ENSORLG00000002398) #36	ENSORLG00000025896	DMGDH (ENSORLG00000002405) #37
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Clown anemonefish	MODERN SPECIES	1313															F2RL2 (ENSAOCG00000001624) #19	f2r2.1 (ENSAOCG00000022288) #21	f2rl1.1 (ENSAOCG00000022291) #22	f2rl1.2 (ENSAOCG00000022302) #22	ch25hl2 (ENSAOCG00000022312)	s100z (ENSAOCG00000022366) #23	crhbp (ENSAOCG00000022382) #24	PDE8B (ENSAOCG00000022435) #27	wdr41 (ENSAOCG00000022458) #28	otpa (ENSAOCG00000001634) #29	tbca (ENSAOCG00000022489) #30	AP3B1 (ENSAOCG00000001638) #31	scamp1 (ENSAOCG00000022572) #33	ENSAOCG00000022604	taf6l (ENSAOCG00000022645)	cth1 (ENSAOCG00000001644)	mta2 (ENSAOCG00000022686)
Orange clownfish	MODERN SPECIES	7	mzt2b (ENSAPEG00000004797)	ENSAPEG00000004780	lhx5 (ENSAPEG00000004769)	GCNT4 (ENSAPEG00000004763) #10	hmgcrb (ENSAPEG00000004677) #12	CERT1 (ENSAPEG00000004574) #13	ENSAPEG00000004515	SV2C (ENSAPEG00000004477) #18	ENSAPEG00000004446	ENSAPEG00000004414	ENSAPEG00000004380	ENSAPEG00000004369	ENSAPEG00000004345	SV2C (ENSAPEG00000004307) #18	F2RL2 (ENSAPEG00000004295) #19	f2r2.1 (ENSAPEG00000004248) #21	f2rl1.1 (ENSAPEG00000004237) #22	f2rl1.2 (ENSAPEG00000004215) #22	ch25hl2 (ENSAPEG00000004200)	s100z (ENSAPEG00000004132) #23	crhbp (ENSAPEG00000004114) #24	PDE8B (ENSAPEG00000003990) #27	wdr41 (ENSAPEG00000003933) #28	otpa (ENSAPEG00000003913) #29	tbca (ENSAPEG00000003898) #30	ENSAPEG00000003873	AP3B1 (ENSAPEG00000003852) #31	scamp1 (ENSAPEG00000003780) #33	lhfpl2a (ENSAPEG00000003763) #34	scamp1 (ENSAPEG00000003704) #33	ENSAPEG00000003682
Spiny chromis	MODERN SPECIES	830												CERT1 (ENSAPOG00000017976) #13	ENSAPOG00000017894	SV2C (ENSAPOG00000000802) #18	F2RL2 (ENSAPOG00000017795) #19	f2r2.1 (ENSAPOG00000017788) #21	f2rl1.1 (ENSAPOG00000017781) #22	f2rl1.2 (ENSAPOG00000017767) #22	ch25hl2 (ENSAPOG00000017761)	s100z (ENSAPOG00000017741) #23	crhbp (ENSAPOG00000017678) #24	PDE8B (ENSAPOG00000017665) #27
Bicolor damselfish	MODERN SPECIES	1279													ENSSPAG00000013781	SV2C (ENSSPAG00000013822) #18	F2RL2 (ENSSPAG00000013850) #19	f2r2.1 (ENSSPAG00000013860) #21	f2rl1.1 (ENSSPAG00000013870) #22	f2rl1.2 (ENSSPAG00000013879) #22	ch25hl2 (ENSSPAG00000013882)	s100z (ENSSPAG00000013895) #23	crhbp (ENSSPAG00000013933) #24
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	1283														F2R (ENSACIG00000003761) #21	ENSACIG00000003771 #21	F2R (ENSACIG00000003782) #21
Midas cichlid	MODERN SPECIES	1283																F2R (ENSACIG00000003761) #21	ENSACIG00000003771 #21	F2R (ENSACIG00000003782) #21
Midas cichlid	MODERN SPECIES	855	cops4 (ENSACIG00000006031)	plac8.1 (ENSACIG00000006053)	ADAMTS6 (ENSACIG00000006065)	cwc27 (ENSACIG00000006121)	ppwd1 (ENSACIG00000006162)	trim23 (ENSACIG00000006198)	mzt2b (ENSACIG00000006234)	lhx5 (ENSACIG00000006268)	GCNT4 (ENSACIG00000006280) #10	hmgcrb (ENSACIG00000006291) #12	CERT1 (ENSACIG00000006342) #13	SV2C (ENSACIG00000006388) #18	F2RL2 (ENSACIG00000006421) #19	F2R (ENSACIG00000006433) #21	F2R (ENSACIG00000006447) #21	F2R (ENSACIG00000006452) #21
Midas cichlid	MODERN SPECIES	1283															F2R (ENSACIG00000003761) #21	ENSACIG00000003771 #21	F2R (ENSACIG00000003782) #21
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	855	ENSACIG00000005995	lin54 (ENSACIG00000006005)	cops4 (ENSACIG00000006031)	plac8.1 (ENSACIG00000006053)	ADAMTS6 (ENSACIG00000006065)	cwc27 (ENSACIG00000006121)	ppwd1 (ENSACIG00000006162)	trim23 (ENSACIG00000006198)	mzt2b (ENSACIG00000006234)	lhx5 (ENSACIG00000006268)	GCNT4 (ENSACIG00000006280) #10	hmgcrb (ENSACIG00000006291) #12	CERT1 (ENSACIG00000006342) #13	SV2C (ENSACIG00000006388) #18	F2RL2 (ENSACIG00000006421) #19	F2R (ENSACIG00000006433) #21	F2R (ENSACIG00000006447) #21	F2R (ENSACIG00000006452) #21
Midas cichlid	MODERN SPECIES	855															F2R (ENSACIG00000006452) #21	F2R (ENSACIG00000006447) #21	F2R (ENSACIG00000006433) #21	F2RL2 (ENSACIG00000006421) #19	SV2C (ENSACIG00000006388) #18	CERT1 (ENSACIG00000006342) #13	hmgcrb (ENSACIG00000006291) #12	GCNT4 (ENSACIG00000006280) #10	lhx5 (ENSACIG00000006268)	mzt2b (ENSACIG00000006234)	trim23 (ENSACIG00000006198)	ppwd1 (ENSACIG00000006162)	cwc27 (ENSACIG00000006121)	ADAMTS6 (ENSACIG00000006065)	plac8.1 (ENSACIG00000006053)	cops4 (ENSACIG00000006031)	lin54 (ENSACIG00000006005)
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Zebra mbuna	MODERN SPECIES	1110	cops4 (ENSMZEG00005007315)	plac8.1 (ENSMZEG00005007305)	ADAMTS6 (ENSMZEG00005007248)	cwc27 (ENSMZEG00005007217)	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34	ARSB (ENSMZEG00005006208) #36
Eastern happy	MODERN SPECIES	19	ADAMTS6 (ENSACLG00000025480)	ENSACLG00000025574	ENSACLG00000025619	cwc27 (ENSACLG00000025628)	ppwd1 (ENSACLG00000025671)	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33	lhfpl2a (ENSACLG00000026258) #34
P. nyererei	MODERN SPECIES	297	cops4 (ENSPNYG00000005262)	ADAMTS6 (ENSPNYG00000005317)	cwc27 (ENSPNYG00000005384)	ppwd1 (ENSPNYG00000005473)	trim23 (ENSPNYG00000005520)	mzt2b (ENSPNYG00000005538)	lhx5 (ENSPNYG00000005549)	GCNT4 (ENSPNYG00000005563) #10	ENSPNYG00000005572	hmgcrb (ENSPNYG00000005594) #12	CERT1 (ENSPNYG00000005673) #13	SV2C (ENSPNYG00000005738) #18	F2RL2 (ENSPNYG00000005774) #19	F2RL2 (ENSPNYG00000005804) #19	F2R (ENSPNYG00000005812) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005859) #21	f2rl1.1 (ENSPNYG00000005869) #22	f2rl1.2 (ENSPNYG00000005884) #22	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915) #23	crhbp (ENSPNYG00000005959) #24	PDE8B (ENSPNYG00000005997) #27	wdr41 (ENSPNYG00000006061) #28	otpa (ENSPNYG00000006080) #29	tbca (ENSPNYG00000006104) #30	AP3B1 (ENSPNYG00000006176) #31	scamp1 (ENSPNYG00000006292) #33	lhfpl2a (ENSPNYG00000006322) #34	ARSB (ENSPNYG00000006334) #36	DMGDH (ENSPNYG00000006358) #37
Lyretail cichlid	MODERN SPECIES	419	lin54 (ENSNBRG00000019683)	cops4 (ENSNBRG00000019754)	plac8.1 (ENSNBRG00000019785)	ADAMTS6 (ENSNBRG00000019825)	cwc27 (ENSNBRG00000019906)	ppwd1 (ENSNBRG00000019956)	trim23 (ENSNBRG00000019976)	mzt2b (ENSNBRG00000019985)	lhx5 (ENSNBRG00000019994)	GCNT4 (ENSNBRG00000020005) #10	hmgcrb (ENSNBRG00000020016) #12	CERT1 (ENSNBRG00000020026) #13	SV2C (ENSNBRG00000020050) #18	F2R (ENSNBRG00000020074) #21	F2RL2 (ENSNBRG00000020084) #19	F2R (ENSNBRG00000020103) #21	f2rl1.1 (ENSNBRG00000020117) #22	f2rl1.2 (ENSNBRG00000020123) #22	ch25hl2 (ENSNBRG00000020125)	s100z (ENSNBRG00000020136) #23	crhbp (ENSNBRG00000020174) #24	PDE8B (ENSNBRG00000020198) #27	wdr41 (ENSNBRG00000000420) #28	otpa (ENSNBRG00000000509) #29	tbca (ENSNBRG00000000529) #30	AP3B1 (ENSNBRG00000000578) #31
Nile tilapia	MODERN SPECIES	19	plac8.1 (ENSONIG00000015410)	ADAMTS6 (ENSONIG00000015412)	cwc27 (ENSONIG00000015415)	ppwd1 (ENSONIG00000015422)	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34	ARSB (ENSONIG00000015486) #36
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Burton s mouthbrooder	MODERN SPECIES	380																ENSHBUG00000006042 #21	F2R (ENSHBUG00000006089) #21	f2rl1.1 (ENSHBUG00000006111) #22	f2rl1.2 (ENSHBUG00000006100) #22	ch25hl2 (ENSHBUG00000006126)	s100z (ENSHBUG00000006132) #23	crhbp (ENSHBUG00000000153) #24	PDE8B (ENSHBUG00000006197) #27	wdr41 (ENSHBUG00000006222) #28	otpa (ENSHBUG00000006237) #29	tbca (ENSHBUG00000006256) #30	AP3B1 (ENSHBUG00000006320) #31	scamp1 (ENSHBUG00000006341) #33	lhfpl2a (ENSHBUG00000006355) #34	ARSB (ENSHBUG00000006398) #36	DMGDH (ENSHBUG00000006495) #37
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Zebra mbuna	MODERN SPECIES	1110	plac8.1 (ENSMZEG00005007305)	ADAMTS6 (ENSMZEG00005007248)	cwc27 (ENSMZEG00005007217)	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34	ARSB (ENSMZEG00005006208) #36	ENSMZEG00005006197
Eastern happy	MODERN SPECIES	19	ENSACLG00000025574	ENSACLG00000025619	cwc27 (ENSACLG00000025628)	ppwd1 (ENSACLG00000025671)	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33	lhfpl2a (ENSACLG00000026258) #34	ARSB (ENSACLG00000026268) #36
P. nyererei	MODERN SPECIES	297	ADAMTS6 (ENSPNYG00000005317)	cwc27 (ENSPNYG00000005384)	ppwd1 (ENSPNYG00000005473)	trim23 (ENSPNYG00000005520)	mzt2b (ENSPNYG00000005538)	lhx5 (ENSPNYG00000005549)	GCNT4 (ENSPNYG00000005563) #10	ENSPNYG00000005572	hmgcrb (ENSPNYG00000005594) #12	CERT1 (ENSPNYG00000005673) #13	SV2C (ENSPNYG00000005738) #18	F2RL2 (ENSPNYG00000005774) #19	F2RL2 (ENSPNYG00000005804) #19	F2R (ENSPNYG00000005812) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005859) #21	f2rl1.1 (ENSPNYG00000005869) #22	f2rl1.2 (ENSPNYG00000005884) #22	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915) #23	crhbp (ENSPNYG00000005959) #24	PDE8B (ENSPNYG00000005997) #27	wdr41 (ENSPNYG00000006061) #28	otpa (ENSPNYG00000006080) #29	tbca (ENSPNYG00000006104) #30	AP3B1 (ENSPNYG00000006176) #31	scamp1 (ENSPNYG00000006292) #33	lhfpl2a (ENSPNYG00000006322) #34	ARSB (ENSPNYG00000006334) #36	DMGDH (ENSPNYG00000006358) #37	bhmt (ENSPNYG00000006436)
Lyretail cichlid	MODERN SPECIES	1033																ENSNBRG00000011185 #21
Nile tilapia	MODERN SPECIES	19	ADAMTS6 (ENSONIG00000015412)	cwc27 (ENSONIG00000015415)	ppwd1 (ENSONIG00000015422)	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34	ARSB (ENSONIG00000015486) #36	slc1a1 (ENSONIG00000007386)
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Zebra mbuna	MODERN SPECIES	1110	ADAMTS6 (ENSMZEG00005007248)	cwc27 (ENSMZEG00005007217)	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34	ARSB (ENSMZEG00005006208) #36	ENSMZEG00005006197	DMGDH (ENSMZEG00005006121) #37
Eastern happy	MODERN SPECIES	19	cwc27 (ENSACLG00000025628)	ppwd1 (ENSACLG00000025671)	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33	lhfpl2a (ENSACLG00000026258) #34	ARSB (ENSACLG00000026268) #36	ENSACLG00000026286	ENSACLG00000026291
Burton s mouthbrooder	MODERN SPECIES	380															ENSHBUG00000006042 #21	F2R (ENSHBUG00000006089) #21	f2rl1.1 (ENSHBUG00000006111) #22	f2rl1.2 (ENSHBUG00000006100) #22	ch25hl2 (ENSHBUG00000006126)	s100z (ENSHBUG00000006132) #23	crhbp (ENSHBUG00000000153) #24	PDE8B (ENSHBUG00000006197) #27	wdr41 (ENSHBUG00000006222) #28	otpa (ENSHBUG00000006237) #29	tbca (ENSHBUG00000006256) #30	AP3B1 (ENSHBUG00000006320) #31	scamp1 (ENSHBUG00000006341) #33	lhfpl2a (ENSHBUG00000006355) #34	ARSB (ENSHBUG00000006398) #36	DMGDH (ENSHBUG00000006495) #37	bhmt (ENSHBUG00000006515)
Nile tilapia	MODERN SPECIES	19	cwc27 (ENSONIG00000015415)	ppwd1 (ENSONIG00000015422)	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34	ARSB (ENSONIG00000015486) #36	slc1a1 (ENSONIG00000007386)	DMGDH (ENSONIG00000007381) #37
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34
Nile tilapia	MODERN SPECIES	19	cops4 (ENSONIG00000015405)	plac8.1 (ENSONIG00000015410)	ADAMTS6 (ENSONIG00000015412)	cwc27 (ENSONIG00000015415)	ppwd1 (ENSONIG00000015422)	trim23 (ENSONIG00000015424)	mzt2b (ENSONIG00000015425)	lhx5 (ENSONIG00000015427)	GCNT4 (ENSONIG00000015429) #10	hmgcrb (ENSONIG00000015431) #12	CERT1 (ENSONIG00000015433) #13	SV2C (ENSONIG00000015437) #18	cmklr1 (ENSONIG00000035231)	cmklr1 (ENSONIG00000042385)	F2RL2 (ENSONIG00000028117) #19	F2R (ENSONIG00000042992) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015441) #21	f2rl1.1 (ENSONIG00000015446) #22	f2rl1.2 (ENSONIG00000015447) #22	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896) #23	crhbp (ENSONIG00000015451) #24	PDE8B (ENSONIG00000015454) #27	wdr41 (ENSONIG00000015465) #28	otpa (ENSONIG00000015466) #29	tbca (ENSONIG00000038998) #30	AP3B1 (ENSONIG00000015468) #31	scamp1 (ENSONIG00000015481) #33	lhfpl2 (ENSONIG00000040189) #34
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34
Haplochromini	ANCESTRAL SPECIES		ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b.e #19	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34
Eastern happy	MODERN SPECIES	19	plac8.1 (ENSACLG00000025459)	ADAMTS6 (ENSACLG00000025480)	ENSACLG00000025574	ENSACLG00000025619	cwc27 (ENSACLG00000025628)	ppwd1 (ENSACLG00000025671)	trim23 (ENSACLG00000025724)	mzt2b (ENSACLG00000025764)	lhx5 (ENSACLG00000025781)	GCNT4 (ENSACLG00000025787) #10	hmgcrb (ENSACLG00000025791) #12	CERT1 (ENSACLG00000025839) #13	SV2C (ENSACLG00000025881) #18	F2RL2 (ENSACLG00000025896) #19	F2RL2 (ENSACLG00000025905) #19	F2R (ENSACLG00000025911) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025951) #21	ENSACLG00000025957	F2R (ENSACLG00000025972) #21	f2rl1.1 (ENSACLG00000025981) #22	f2rl1.2 (ENSACLG00000025984) #22	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995) #23	crhbp (ENSACLG00000026018) #24	PDE8B (ENSACLG00000026032) #27	wdr41 (ENSACLG00000026095) #28	otpa (ENSACLG00000026112) #29	tbca (ENSACLG00000026126) #30	AP3B1 (ENSACLG00000026156) #31	scamp1 (ENSACLG00000026234) #33
Zebra mbuna	MODERN SPECIES	1110	lin54 (ENSMZEG00005007345)	cops4 (ENSMZEG00005007315)	plac8.1 (ENSMZEG00005007305)	ADAMTS6 (ENSMZEG00005007248)	cwc27 (ENSMZEG00005007217)	ppwd1 (ENSMZEG00005007195)	trim23 (ENSMZEG00005007146)	mzt2b (ENSMZEG00005007140)	lhx5 (ENSMZEG00005007128)	GCNT4 (ENSMZEG00005007116) #10	hmgcrb (ENSMZEG00005007061) #12	CERT1 (ENSMZEG00005007008) #13	SV2C (ENSMZEG00005006941) #18	F2RL2 (ENSMZEG00005006925) #19	F2RL2 (ENSMZEG00005006917) #19	F2R (ENSMZEG00005006911) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006871) #21	f2rl1.1 (ENSMZEG00005006863) #22	f2rl1.2 (ENSMZEG00005006848) #22	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797) #23	crhbp (ENSMZEG00005006393) #24	PDE8B (ENSMZEG00005006348) #27	wdr41 (ENSMZEG00005006325) #28	otpa (ENSMZEG00005006314) #29	tbca (ENSMZEG00005006300) #30	AP3B1 (ENSMZEG00005006264) #31	scamp1 (ENSMZEG00005006251) #33	lhfpl2a (ENSMZEG00005006236) #34
P. nyererei	MODERN SPECIES	297	lin54 (ENSPNYG00000005193)	cops4 (ENSPNYG00000005262)	ADAMTS6 (ENSPNYG00000005317)	cwc27 (ENSPNYG00000005384)	ppwd1 (ENSPNYG00000005473)	trim23 (ENSPNYG00000005520)	mzt2b (ENSPNYG00000005538)	lhx5 (ENSPNYG00000005549)	GCNT4 (ENSPNYG00000005563) #10	ENSPNYG00000005572	hmgcrb (ENSPNYG00000005594) #12	CERT1 (ENSPNYG00000005673) #13	SV2C (ENSPNYG00000005738) #18	F2RL2 (ENSPNYG00000005774) #19	F2RL2 (ENSPNYG00000005804) #19	F2R (ENSPNYG00000005812) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005859) #21	f2rl1.1 (ENSPNYG00000005869) #22	f2rl1.2 (ENSPNYG00000005884) #22	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915) #23	crhbp (ENSPNYG00000005959) #24	PDE8B (ENSPNYG00000005997) #27	wdr41 (ENSPNYG00000006061) #28	otpa (ENSPNYG00000006080) #29	tbca (ENSPNYG00000006104) #30	AP3B1 (ENSPNYG00000006176) #31	scamp1 (ENSPNYG00000006292) #33	lhfpl2a (ENSPNYG00000006322) #34	ARSB (ENSPNYG00000006334) #36
Lyretail cichlid	MODERN SPECIES	419	TMEM150C (ENSNBRG00000019597)	sec31a (ENSNBRG00000019633)	lin54 (ENSNBRG00000019683)	cops4 (ENSNBRG00000019754)	plac8.1 (ENSNBRG00000019785)	ADAMTS6 (ENSNBRG00000019825)	cwc27 (ENSNBRG00000019906)	ppwd1 (ENSNBRG00000019956)	trim23 (ENSNBRG00000019976)	mzt2b (ENSNBRG00000019985)	lhx5 (ENSNBRG00000019994)	GCNT4 (ENSNBRG00000020005) #10	hmgcrb (ENSNBRG00000020016) #12	CERT1 (ENSNBRG00000020026) #13	SV2C (ENSNBRG00000020050) #18	F2R (ENSNBRG00000020074) #21	F2RL2 (ENSNBRG00000020084) #19	F2R (ENSNBRG00000020103) #21	f2rl1.1 (ENSNBRG00000020117) #22	f2rl1.2 (ENSNBRG00000020123) #22	ch25hl2 (ENSNBRG00000020125)	s100z (ENSNBRG00000020136) #23	crhbp (ENSNBRG00000020174) #24	PDE8B (ENSNBRG00000020198) #27	wdr41 (ENSNBRG00000000420) #28	otpa (ENSNBRG00000000509) #29	tbca (ENSNBRG00000000529) #30	AP3B1 (ENSNBRG00000000578) #31
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	528													SV2C (ENSLBEG00000027198) #18	F2RL2 (ENSLBEG00000027190) #19	F2R (ENSLBEG00000027145) #21	F2R (ENSLBEG00000027117) #21	f2rl1.1 (ENSLBEG00000027106) #22	f2rl1.2 (ENSLBEG00000027102) #22	ch25hl2 (ENSLBEG00000027095)	s100z (ENSLBEG00000027087) #23	crhbp (ENSLBEG00000027080) #24	PDE8B (ENSLBEG00000027056) #27	wdr41 (ENSLBEG00000027031) #28	otpa (ENSLBEG00000027017) #29	ENSLBEG00000026976	tbca (ENSLBEG00000026946) #30	AP3B1 (ENSLBEG00000026927) #31	ENSLBEG00000026912 #31
Ballan wrasse	MODERN SPECIES	528														SV2C (ENSLBEG00000027198) #18	F2RL2 (ENSLBEG00000027190) #19	F2R (ENSLBEG00000027145) #21	F2R (ENSLBEG00000027117) #21	f2rl1.1 (ENSLBEG00000027106) #22	f2rl1.2 (ENSLBEG00000027102) #22	ch25hl2 (ENSLBEG00000027095)	s100z (ENSLBEG00000027087) #23	crhbp (ENSLBEG00000027080) #24	PDE8B (ENSLBEG00000027056) #27	wdr41 (ENSLBEG00000027031) #28	otpa (ENSLBEG00000027017) #29	ENSLBEG00000026976	tbca (ENSLBEG00000026946) #30	AP3B1 (ENSLBEG00000026927) #31	ENSLBEG00000026912 #31
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001527	ENSSAUG00010001553	ENSSAUG00010001561	ENSSAUG00010001567	ENSSAUG00010001573	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001561	ENSSAUG00010001567	ENSSAUG00010001573	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001567	ENSSAUG00010001573	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30	ENSSAUG00010009054
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001573	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30	ENSSAUG00010009054	AP3B1 (ENSSAUG00010009064) #31
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001553	ENSSAUG00010001561	ENSSAUG00010001567	ENSSAUG00010001573	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010001586	ENSSAUG00010001610	mzt2b (ENSSAUG00010001633)	lhx5 (ENSSAUG00010001645)	GCNT4 (ENSSAUG00010001654) #10	hmgcrb (ENSSAUG00010001711) #12	CERT1 (ENSSAUG00010002220) #13	ENSSAUG00010005153	SV2C (ENSSAUG00010005160) #18	F2RL2 (ENSSAUG00010005726) #19	F2R (ENSSAUG00010005729) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005740) #21	f2rl1.1 (ENSSAUG00010005743) #22	ENSSAUG00010005745	f2rl1.2 (ENSSAUG00010005746) #22	PDE8B (ENSSAUG00010005798) #27	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785) #23	crhbp (ENSSAUG00010008786) #24	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #28	otpa (ENSSAUG00010009047) #29	tbca (ENSSAUG00010009050) #30	ENSSAUG00010009054	AP3B1 (ENSSAUG00010009064) #31	scamp1 (ENSSAUG00010009142) #33
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125.n #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
European seabass	MODERN SPECIES	9	SEC31A (ENSDLAG00005020508)	lin54 (ENSDLAG00005020845)	COPS4 (ENSDLAG00005020910)	plac8.1 (ENSDLAG00005020949)	ENSDLAG00005020960	ENSDLAG00005021155	ENSDLAG00005021185	ENSDLAG00005013686	mzt2b (ENSDLAG00005031291)	ENSDLAG00005028991	GCNT4 (ENSDLAG00005027499) #10	hmgcrb (ENSDLAG00005021232) #12	CERT1 (ENSDLAG00005021764) #13	SV2C (ENSDLAG00005022048) #18	F2RL2 (ENSDLAG00005022059) #19	f2r2.1 (ENSDLAG00005022061) #21	f2rl1.2 (ENSDLAG00005022063) #22	ch25hl2 (ENSDLAG00005022068)	s100z (ENSDLAG00005022069) #23	crhbp (ENSDLAG00005022074) #24	PDE8B (ENSDLAG00005022099) #27	wdr41 (ENSDLAG00005022564) #28	otpa (ENSDLAG00005022587) #29	AP3B1 (ENSDLAG00005022652) #31	SCAMP1 (ENSDLAG00005034904) #33	LHFPL2 (ENSDLAG00005023771) #34	ARSB (ENSDLAG00005023776) #36	DMGDH (ENSDLAG00005000598) #37	bhmt (ENSDLAG00005000880)	JMY (ENSDLAG00005000911)	HOMER1 (ENSDLAG00005029240)
Large yellow croaker	MODERN SPECIES	4	ENSLCRG00005007072	ENSLCRG00005007382	CNNM4 (ENSLCRG00005007667)	CNNM3 (ENSLCRG00005007677)	ENSLCRG00005007680	PURB (ENSLCRG00005007682)	ved (ENSLCRG00005007685)	polm (ENSLCRG00005007689)	mzt2b (ENSLCRG00005007793)	lhx5 (ENSLCRG00005007797)	GCNT4 (ENSLCRG00005007802) #10	hmgcrb (ENSLCRG00005007812) #12	CERT1 (ENSLCRG00005008123) #13	SV2C (ENSLCRG00005010695) #18	F2RL2 (ENSLCRG00005010753) #19	f2r2.1 (ENSLCRG00005010755) #21	f2rl1.1 (ENSLCRG00005010756) #22	f2rl1.2 (ENSLCRG00005010757) #22	s100z (ENSLCRG00005010758) #23	ch25hl2 (ENSLCRG00005010760)	crhbp (ENSLCRG00005010764) #24	PDE8B (ENSLCRG00005010781) #27	wdr41 (ENSLCRG00005010827) #28	otpa (ENSLCRG00005010920) #29	tbca (ENSLCRG00005010923) #30	AP3B1 (ENSLCRG00005010933) #31	scamp1 (ENSLCRG00005011792) #33	lhfpl2a (ENSLCRG00005011798) #34	ARSB (ENSLCRG00005011801) #36	bhmt (ENSLCRG00005011814)	DMGDH (ENSLCRG00005011869) #37
Perciformes	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Lumpfish	MODERN SPECIES	3	enoph1 (ENSCLMG00005018139)	sec31a (ENSCLMG00005018147)	lin54 (ENSCLMG00005018332)	cops4 (ENSCLMG00005018470)	plac8.1 (ENSCLMG00005018495)	ADAMTS6 (ENSCLMG00005018496)	cwc27 (ENSCLMG00005018500)	ppwd1 (ENSCLMG00005018502)	trim23 (ENSCLMG00005018578)	mzt2b (ENSCLMG00005018711)	lhx5 (ENSCLMG00005018712)	GCNT4 (ENSCLMG00005018715) #10	hmgcrb (ENSCLMG00005018721) #12	CERT1 (ENSCLMG00005018833) #13	SV2C (ENSCLMG00005019494) #18	f2r2.1 (ENSCLMG00005019506) #21	f2rl1.1 (ENSCLMG00005019507) #22	f2rl1.2 (ENSCLMG00005019508) #22	ch25hl2 (ENSCLMG00005019509)	s100z (ENSCLMG00005019510) #23	crhbp (ENSCLMG00005004294) #24	PDE8B (ENSCLMG00005004331) #27	wdr41 (ENSCLMG00005004503) #28	otpa (ENSCLMG00005004607) #29	tbca (ENSCLMG00005004813) #30	AP3B1 (ENSCLMG00005004891) #31	scamp1 (ENSCLMG00005010083) #33	lhfpl2a (ENSCLMG00005010085) #34	ARSB (ENSCLMG00005010086) #36	DMGDH (ENSCLMG00005010089) #37	bhmt (ENSCLMG00005010092)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Channel bull blenny	MODERN SPECIES	3	sec31a (ENSCGOG00000011628)	lin54 (ENSCGOG00000015485)	cops4 (ENSCGOG00000015563)	plac8.1 (ENSCGOG00000015587)	ADAMTS6 (ENSCGOG00000015595)	cwc27 (ENSCGOG00000015627)	ppwd1 (ENSCGOG00000015933)	trim23 (ENSCGOG00000016037)	mzt2b (ENSCGOG00000016240)	lhx5 (ENSCGOG00000016241)	GCNT4 (ENSCGOG00000016250) #10	hmgcrb (ENSCGOG00000016256) #12	CERT1 (ENSCGOG00000016569) #13	SV2C (ENSCGOG00000017410) #18	ENSCGOG00000017878 #19	f2r2.1 (ENSCGOG00000017879) #21	f2rl1.1 (ENSCGOG00000017880) #22	f2rl1.2 (ENSCGOG00000017882) #22	s100z (ENSCGOG00000017887) #23	crhbp (ENSCGOG00000017890) #24	PDE8B (ENSCGOG00000017917) #27	wdr41 (ENSCGOG00000018568) #28	otpa (ENSCGOG00000018661) #29	tbca (ENSCGOG00000018671) #30	AP3B1 (ENSCGOG00000018679) #31	scamp1 (ENSCGOG00000018847) #33	lhfpl2a (ENSCGOG00000018856) #34	ARSB (ENSCGOG00000018860) #36	DMGDH (ENSCGOG00000018919) #37	bhmt (ENSCGOG00000019370)	JMY (ENSCGOG00000019494)
Pike perch	MODERN SPECIES	33				PLAC8 (ENSSLUG00000016285)	ADAMTS6 (ENSSLUG00000016185)	cwc27 (ENSSLUG00000016168)	ppwd1 (ENSSLUG00000016134)	trim23 (ENSSLUG00000015714)	mzt2b (ENSSLUG00000015678)	lhx5 (ENSSLUG00000015671)	GCNT4 (ENSSLUG00000015667) #10	hmgcrb (ENSSLUG00000014926) #12	CERT1 (ENSSLUG00000012625) #13	SV2C (ENSSLUG00000012183) #18	F2RL2 (ENSSLUG00000012168) #19	f2r2.1 (ENSSLUG00000012165) #21	f2rl1.1 (ENSSLUG00000012162) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.2 (ENSSLUG00000012151) #22	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144) #23	crhbp (ENSSLUG00000012137) #24	PDE8B (ENSSLUG00000012130) #27	wdr41 (ENSSLUG00000011958) #28	otpa (ENSSLUG00000011935) #29	tbca (ENSSLUG00000011926) #30	AP3B1 (ENSSLUG00000011801) #31	scamp1 (ENSSLUG00000011766) #33	lhfpl2a (ENSSLUG00000011761) #34	ARSB (ENSSLUG00000011744) #36
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Carangaria	ANCESTRAL SPECIES	17	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Turbot	MODERN SPECIES	16	sec31a (ENSSMAG00000009779)	lin54 (ENSSMAG00000009869)	COPS4 (ENSSMAG00000009906)	plac8.1 (ENSSMAG00000028205)	ENSSMAG00000009966	ENSSMAG00000010093	ENSSMAG00000010108	ENSSMAG00000010139	mzt2b (ENSSMAG00000010171)	ENSSMAG00000035108	hmgcrb (ENSSMAG00000010211) #12	GCNT4 (ENSSMAG00000010203) #10	ENSSMAG00000010255 #13	SV2C (ENSSMAG00000010339) #18	F2RL2 (ENSSMAG00000024561) #19	f2r2.1 (ENSSMAG00000030722) #21	f2rl1.1 (ENSSMAG00000010383) #22	f2rl1.2 (ENSSMAG00000027655) #22	ch25hl2 (ENSSMAG00000010398)	s100z (ENSSMAG00000024918) #23	crhbp (ENSSMAG00000010424) #24	PDE8B (ENSSMAG00000010435) #27	wdr41 (ENSSMAG00000010452) #28	otpa (ENSSMAG00000026303) #29	tbca (ENSSMAG00000010486) #30	AP3B1 (ENSSMAG00000010503) #31	SCAMP1 (ENSSMAG00000010527) #33	ENSSMAG00000026772	LHFPL2 (ENSSMAG00000010559) #34	ARSB (ENSSMAG00000010569) #36	DMGDH (ENSSMAG00000010584) #37
Tongue sole	MODERN SPECIES	5	sec31a (ENSCSEG00000010931)	lin54 (ENSCSEG00000011040)	cops4 (ENSCSEG00000011083)	plac8.1 (ENSCSEG00000011107)	ADAMTS6 (ENSCSEG00000011127)	cwc27 (ENSCSEG00000011251)	ppwd1 (ENSCSEG00000011265)	trim23 (ENSCSEG00000011286)	mzt2b (ENSCSEG00000011312)	lhx5 (ENSCSEG00000011321)	GCNT4 (ENSCSEG00000011334) #10	hmgcrb (ENSCSEG00000011342) #12	CERT1 (ENSCSEG00000011385) #13	SV2C (ENSCSEG00000011413) #18	F2RL2 (ENSCSEG00000011425) #19	f2r2.1 (ENSCSEG00000011427) #21	f2rl1.1 (ENSCSEG00000011434) #22	f2rl1.2 (ENSCSEG00000011438) #22	ch25hl2 (ENSCSEG00000011443)	s100z (ENSCSEG00000011450) #23	slc27a6 (ENSCSEG00000011454)	ENSCSEG00000011463	SEZ6L (ENSCSEG00000011474)	ENSCSEG00000011496	grk3 (ENSCSEG00000011551)	cryba4 (ENSCSEG00000011585)	crybb1 (ENSCSEG00000011597)	acads (ENSCSEG00000011604)	ENSCSEG00000011625	ENSCSEG00000011631	ENSCSEG00000011639
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Seriola	ANCESTRAL SPECIES	53	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.n #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Greater amberjack	MODERN SPECIES	297																f2r2.1 (ENSSDUG00000023504) #21	f2rl1.1 (ENSSDUG00000023505) #22	f2rl1.2 (ENSSDUG00000023507) #22	ch25hl2 (ENSSDUG00000023510)	s100z (ENSSDUG00000023512) #23	crhbp (ENSSDUG00000023513) #24	PDE8B (ENSSDUG00000023518) #27
Yellowtail amberjack	MODERN SPECIES	3042	ENSSLDG00000013537	lin54 (ENSSLDG00000013557)	cops4 (ENSSLDG00000013604)	plac8.1 (ENSSLDG00000013652)	ADAMTS6 (ENSSLDG00000013672)	cwc27 (ENSSLDG00000013750)	ppwd1 (ENSSLDG00000013794)	trim23 (ENSSLDG00000013815)	mzt2b (ENSSLDG00000013865)	lhx5 (ENSSLDG00000013882)	GCNT4 (ENSSLDG00000013894) #10	hmgcrb (ENSSLDG00000013913) #12	CERT1 (ENSSLDG00000013970) #13	SV2C (ENSSLDG00000014039) #18	F2RL2 (ENSSLDG00000014063) #19	f2r2.1 (ENSSLDG00000014072) #21	f2rl1.1 (ENSSLDG00000014079) #22	f2rl1.2 (ENSSLDG00000014088) #22	ch25hl2 (ENSSLDG00000014097)	s100z (ENSSLDG00000014112) #23	crhbp (ENSSLDG00000014122) #24	PDE8B (ENSSLDG00000014147) #27	wdr41 (ENSSLDG00000014187) #28	otpa (ENSSLDG00000014245) #29	tbca (ENSSLDG00000014269) #30	AP3B1 (ENSSLDG00000014297) #31	scamp1 (ENSSLDG00000014368) #33	lhfpl2a (ENSSLDG00000014391) #34	ARSB (ENSSLDG00000014410) #36	DMGDH (ENSSLDG00000014440) #37	bhmt (ENSSLDG00000014491)
Barramundi perch	MODERN SPECIES	34			cops4 (ENSLCAG00010004238)	PLAC8 (ENSLCAG00010004226)	ADAMTS6 (ENSLCAG00010004119)	cwc27 (ENSLCAG00010004089)	ppwd1 (ENSLCAG00010004059)	trim23 (ENSLCAG00010004039)	mzt2b (ENSLCAG00010004024)	lhx5 (ENSLCAG00010004021)	GCNT4 (ENSLCAG00010004017) #10	hmgcrb (ENSLCAG00010003972) #12	CERT1 (ENSLCAG00010003603) #13	SV2C (ENSLCAG00010003544) #18	F2RL2 (ENSLCAG00010003542) #19	f2r2.1 (ENSLCAG00010003537) #21	f2rl1.1 (ENSLCAG00010003533) #22	f2rl1.2 (ENSLCAG00010003531) #22	ch25hl2 (ENSLCAG00010003527)	ENSLCAG00010003294	cyb5r3 (ENSLCAG00010003205)	syt1a (ENSLCAG00010003197)	pawr (ENSLCAG00010003184)	ppp1r12a (ENSLCAG00010003115)	rps16 (ENSLCAG00010003081)	myf6 (ENSLCAG00010003076)	myf5 (ENSLCAG00010003070)	lin7a (ENSLCAG00010003066)	ACSS3 (ENSLCAG00010003060)
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Zig-zag eel	MODERN SPECIES	3	sec31a (ENSMAMG00000004874)	lin54 (ENSMAMG00000004854)	COPS4 (ENSMAMG00000004815)	plac8.1 (ENSMAMG00000004799)	ENSMAMG00000004760	ENSMAMG00000004661	ENSMAMG00000004609	ENSMAMG00000004557	mzt2b (ENSMAMG00000004537)	ENSMAMG00000004519	GCNT4 (ENSMAMG00000004514) #10	ENSMAMG00000004461 #12	CERT1 (ENSMAMG00000004370) #13	SV2C (ENSMAMG00000004324) #18	F2RL2 (ENSMAMG00000004316) #19	f2r2.1 (ENSMAMG00000027882) #21	f2rl1.1 (ENSMAMG00000004308) #22	f2rl1.2 (ENSMAMG00000004294) #22	ch25hl2 (ENSMAMG00000004284)	s100z (ENSMAMG00000004265) #23	crhbp (ENSMAMG00000004254) #24	PDE8B (ENSMAMG00000004204) #27	wdr41 (ENSMAMG00000004169) #28	otpa (ENSMAMG00000004156) #29	tbca (ENSMAMG00000004128) #30	AP3B1 (ENSMAMG00000004074) #31	SCAMP1 (ENSMAMG00000004014) #33	LHFPL2 (ENSMAMG00000003982) #34	ARSB (ENSMAMG00000003940) #36	DMGDH (ENSMAMG00000003893) #37	bhmt (ENSMAMG00000003856)
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000156571	ENSGT00940000155967	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000014845	ENSGT00940000166328	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a.a.a
Siamese fighting fish	MODERN SPECIES	3	cwc27 (ENSBSLG00000010217)	trim23 (ENSBSLG00000009671)	mzt2b (ENSBSLG00000009665)	lhx5 (ENSBSLG00000009656)	GCNT4 (ENSBSLG00000009653) #10	GCNT4 (ENSBSLG00000009651) #10	GCNT4 (ENSBSLG00000009647) #10	GCNT4 (ENSBSLG00000009643) #10	ENSBSLG00000009637 #10	GCNT4 (ENSBSLG00000009603) #10	GCNT4 (ENSBSLG00000009600) #10	GCNT4 (ENSBSLG00000009596) #10	hmgcrb (ENSBSLG00000009538) #12	CERT1 (ENSBSLG00000008877) #13	SV2C (ENSBSLG00000008749) #18	f2r2.1 (ENSBSLG00000008727) #21	f2rl1.1 (ENSBSLG00000008723) #22	f2rl1.2 (ENSBSLG00000008716) #22	ch25hl2 (ENSBSLG00000008714)	s100z (ENSBSLG00000008710) #23	crhbp (ENSBSLG00000008673) #24	PDE8B (ENSBSLG00000007946) #27	wdr41 (ENSBSLG00000007776) #28	otpa (ENSBSLG00000007751) #29	tbca (ENSBSLG00000007725) #30	AP3B1 (ENSBSLG00000006839) #31	scamp1 (ENSBSLG00000006367) #33	lhfpl2a (ENSBSLG00000005975) #34	DMGDH (ENSBSLG00000005714) #37	bhmt (ENSBSLG00000005481)	JMY (ENSBSLG00000005382)
Climbing perch	MODERN SPECIES	3	lin54 (ENSATEG00000007360)	COPS4 (ENSATEG00000007411)	plac8.1 (ENSATEG00000026599)	ENSATEG00000007479	ENSATEG00000007557	ENSATEG00000007567	ENSATEG00000007627	mzt2b (ENSATEG00000007666)	ENSATEG00000007676	GCNT4 (ENSATEG00000007693) #10	GCNT4 (ENSATEG00000007703) #10	ENSATEG00000007723 #12	CERT1 (ENSATEG00000007810) #13	SV2C (ENSATEG00000007944) #18	F2RL2 (ENSATEG00000007994) #19	f2r2.1 (ENSATEG00000029426) #21	f2rl1.1 (ENSATEG00000026082) #22	f2rl1.2 (ENSATEG00000008020) #22	ch25hl2 (ENSATEG00000008028)	s100z (ENSATEG00000008043) #23	crhbp (ENSATEG00000008060) #24	PDE8B (ENSATEG00000008314) #27	wdr41 (ENSATEG00000008464) #28	otpa (ENSATEG00000008473) #29	tbca (ENSATEG00000008490) #30	AP3B1 (ENSATEG00000008505) #31	SCAMP1 (ENSATEG00000008541) #33	LHFPL2 (ENSATEG00000008588) #34	ARSB (ENSATEG00000008598) #36	DMGDH (ENSATEG00000008607) #37	bhmt (ENSATEG00000008673)
Pinecone sodierfish	MODERN SPECIES	3	lin54 (ENSMMDG00005003009)	cops4 (ENSMMDG00005003373)	ENSMMDG00005003389	plac8.1 (ENSMMDG00005003391)	ADAMTS6 (ENSMMDG00005003397)	cwc27 (ENSMMDG00005003407)	ppwd1 (ENSMMDG00005003414)	trim23 (ENSMMDG00005003417)	mzt2b (ENSMMDG00005004523)	lhx5 (ENSMMDG00005004528)	GCNT4 (ENSMMDG00005004536) #10	hmgcrb (ENSMMDG00005004551) #12	CERT1 (ENSMMDG00005004619) #13	SV2C (ENSMMDG00005004990) #18	F2RL2 (ENSMMDG00005005395) #19	f2r2.1 (ENSMMDG00005005400) #21	f2rl1.1 (ENSMMDG00005005405) #22	f2rl1.2 (ENSMMDG00005005408) #22	ch25hl2 (ENSMMDG00005005410)	s100z (ENSMMDG00005005417) #23	crhbp (ENSMMDG00005005426) #24	PDE8B (ENSMMDG00005005550) #27	wdr41 (ENSMMDG00005005908) #28	otpa (ENSMMDG00005005938) #29	tbca (ENSMMDG00005005944) #30	AP3B1 (ENSMMDG00005005969) #31	scamp1 (ENSMMDG00005006270) #33	lhfpl2a (ENSMMDG00005006275) #34	ARSB (ENSMMDG00005006283) #36	DMGDH (ENSMMDG00005006293) #37	bhmt (ENSMMDG00005006373)
Cod	MODERN SPECIES	17	ENSGMOG00000029665	ddx54 (ENSGMOG00000011746)	ENSGMOG00000011766	ABL1 (ENSGMOG00000011771)	exosc2 (ENSGMOG00000011785)	PRDM12 (ENSGMOG00000011797)	FUBP3 (ENSGMOG00000017047)	ASS1 (ENSGMOG00000017022)	ENSGMOG00000016991	ENSGMOG00000016983	ENSGMOG00000014888	ENSGMOG00000014912 #12	ENSGMOG00000014970 ##13	ENSGMOG00000025813	SV2C (ENSGMOG00000023463) #18	f2r2.1 (ENSGMOG00000027262) #21	f2rl1.1 (ENSGMOG00000025867) #22	f2rl1.1 (ENSGMOG00000001234) #22	f2rl1.1 (ENSGMOG00000027511) #22	f2rl1.1 (ENSGMOG00000031845) #22	f2rl1.2 (ENSGMOG00000034124) #22	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360) #23	crhbp (ENSGMOG00000001248) #24	PDE8B (ENSGMOG00000008392) #27	wdr41 (ENSGMOG00000008396) #28	otpa (ENSGMOG00000033256) #29	tbca (ENSGMOG00000008399) #30	AP3B1 (ENSGMOG00000008400) #31	LHFPL2 (ENSGMOG00000025040) #34	ARSB (ENSGMOG00000008406) #36
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00940000155771.c	ENSGT00940000159243	ENSGT00990000205556	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.g #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	573				ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23
Huchen	MODERN SPECIES	1611		ENSHHUG00000041509	pisd (ENSHHUG00000041519)	rnf224 (ENSHHUG00000041534)	prpf4 (ENSHHUG00000041542)	cdc26 (ENSHHUG00000041614)	slc31a1 (ENSHHUG00000041620)	atp6v1g1 (ENSHHUG00000041631)	ENSHHUG00000041646 ##13	CERT1 (ENSHHUG00000041649) #13	ENSHHUG00000041658 #13	ENSHHUG00000041664	ENSHHUG00000041670	SV2C (ENSHHUG00000041673) #18	F2RL2 (ENSHHUG00000041712) #19	F2R (ENSHHUG00000041713) #21	f2rl1.1 (ENSHHUG00000041720) #22	f2rl1.2 (ENSHHUG00000041732) #22	ch25hl2 (ENSHHUG00000041737)	s100z (ENSHHUG00000041742) #23
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00390000012355.A.a.a.b	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37
Salmo	ANCESTRAL SPECIES	1	ENSGT00390000012355.A.a.a.b	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.b #30	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000094624	ENSSSAG00000096934	ENSSSAG00000084204	pisd (ENSSSAG00000105002)	rnf224 (ENSSSAG00000089994)	prpf4 (ENSSSAG00000014066)	cdc26 (ENSSSAG00000087152)	ENSSSAG00000121570	slc31a1 (ENSSSAG00000097858)	VATG1 (ENSSSAG00000078764)	ENSSSAG00000078152 #13	ENSSSAG00000101380	ENSSSAG00000078276	SV2C (ENSSSAG00000077524) #18	F2RL2 (ENSSSAG00000077494) #19	F2R (ENSSSAG00000089851) #21	par2 (ENSSSAG00000077482) #22	ch25hl2 (ENSSSAG00000113693)	s100z (ENSSSAG00000112998) #23	crhbp (ENSSSAG00000077468) #24	aggf1 (ENSSSAG00000077434) #25	PDE8B (ENSSSAG00000078477) #27	ENSSSAG00000089049	otpa (ENSSSAG00000100514) #29	tbca (ENSSSAG00000077412) #30	ENSSSAG00000091845	AP3B1 (ENSSSAG00000076252) #31	ENSSSAG00000099787	SCAMP1 (ENSSSAG00000076200) #33	LHFPL2 (ENSSSAG00000076195) #34	arsb (ENSSSAG00000076193) #36
River trout	MODERN SPECIES	3	ANKRD34B (ENSSTUG00000013186)	ENSSTUG00000013179	ENSSTUG00000013159	pisd (ENSSTUG00000013140)	ENSSTUG00000013135	rnf224 (ENSSTUG00000013121)	prpf4 (ENSSTUG00000012837)	cdc26 (ENSSTUG00000012816)	slc31a1 (ENSSTUG00000012802)	atp6v1g1 (ENSSTUG00000012790)	CERT1 (ENSSTUG00000010713) #13	ENSSTUG00000010643	ENSSTUG00000010636	SV2C (ENSSTUG00000010522) #18	F2RL2 (ENSSTUG00000010510) #19	F2R (ENSSTUG00000010507) #21	f2rl1.1 (ENSSTUG00000010502) #22	f2rl1.2 (ENSSTUG00000010495) #22	ch25hl2 (ENSSTUG00000010489)	s100z (ENSSTUG00000010478) #23	crhbp (ENSSTUG00000010464) #24	aggf1 (ENSSTUG00000010412) #25	PDE8B (ENSSTUG00000010269) #27	ENSSTUG00000010259	otpa (ENSSTUG00000010242) #29	tbca (ENSSTUG00000010231) #30	AP3B1 (ENSSTUG00000007196) #31	ENSSTUG00000007106	scamp1 (ENSSTUG00000007065) #33	lhfpl2a (ENSSTUG00000007040) #34	ARSB (ENSSTUG00000007026) #36
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00390000012355.A.a.a.b	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT00950000183116.a.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.a.a #30	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00940000158176.b #37
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00940000156621.e.b.b	ENSGT00390000012355.A.a.a.b	ENSGT00990000205556.b	ENSGT00520000055626.a.d	ENSGT00390000013484.h	ENSGT00980000198836.c	ENSGT00510000050587.a	ENSGT00940000156006.n.a	ENSGT00390000008457.d.a	ENSGT00940000155147.j	ENSGT00940000154399.d	ENSGT00940000155123.b.b.d #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000182940.b.b.f.f #18	ENSGT01050000244840.A.b.b.b.c #19	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d #23	ENSGT00390000001362.b.g #24	ENSGT00730000111121.d #25	ENSGT00940000157817.e #27	ENSGT00940000159952.a.b.b #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.b #31	ENSGT00940000157310.g.b #33	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #34	ENSGT00940000158270 #36	ENSGT00390000003122.a.a.a.e	ENSGT00510000046704.b.a.c.g
Chinook salmon	MODERN SPECIES	26	TRAF2 (ENSOTSG00005011246)	ANKRD34B (ENSOTSG00005011252)	ENSOTSG00005011253	ENSOTSG00005011254	pisd (ENSOTSG00005011257)	ENSOTSG00005011259	rnf224 (ENSOTSG00005011260)	prpf4 (ENSOTSG00005011262)	cdc26 (ENSOTSG00005011403)	slc31a1 (ENSOTSG00005011404)	atp6v1g1 (ENSOTSG00005011405)	CERT1 (ENSOTSG00005011406) #13	ENSOTSG00005011626	SV2C (ENSOTSG00005011627) #18	F2RL2 (ENSOTSG00005011629) #19	F2R (ENSOTSG00005011630) #21	f2rl1.2 (ENSOTSG00005011631) #22	ch25hl2 (ENSOTSG00005011632)	crhbp (ENSOTSG00005011633) #24	aggf1 (ENSOTSG00005011635) #25	PDE8B (ENSOTSG00005011643) #27	otpa (ENSOTSG00005011703) #29	tbca (ENSOTSG00005011704) #30	AP3B1 (ENSOTSG00005011705) #31	scamp1 (ENSOTSG00005011965) #33	ENSOTSG00005011967	lhfpl2a (ENSOTSG00005011968) #34	ARSB (ENSOTSG00005011970) #36	bhmt (ENSOTSG00005011972)	JMY (ENSOTSG00005012074)	HOMER1 (ENSOTSG00005012085)
Coho salmon	MODERN SPECIES	21	TRAF2 (ENSOKIG00005048246)	ANKRD34B (ENSOKIG00005048256)	ENSOKIG00005048261	ENSOKIG00005048264	PISD (ENSOKIG00005048274)	ENSOKIG00005048284	rnf224 (ENSOKIG00005048285)	prpf4 (ENSOKIG00005048306)	cdc26 (ENSOKIG00005048436)	slc31a1 (ENSOKIG00005048447)	atp6v1g1 (ENSOKIG00005048457)	CERT1 (ENSOKIG00005048556) #13	ENSOKIG00005049142	SV2C (ENSOKIG00005049163) #18	F2RL2 (ENSOKIG00005049244) #19	F2R (ENSOKIG00005049246) #21	f2rl1.2 (ENSOKIG00005049249) #22	ch25hl2 (ENSOKIG00005049253)	s100z (ENSOKIG00005049257) #23	crhbp (ENSOKIG00005049260) #24	aggf1 (ENSOKIG00005049268) #25	PDE8B (ENSOKIG00005049318) #27	ENSOKIG00005049404	otpa (ENSOKIG00005049408) #29	tbca (ENSOKIG00005049413) #30	AP3B1 (ENSOKIG00005049495) #31	scamp1 (ENSOKIG00005049660) #33	ENSOKIG00005049665	LHFPL2 (ENSOKIG00005049668) #34	ENSOKIG00005049671	ARSB (ENSOKIG00005038211) #36
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000033029	ENSOMYG00000069015	ENSOMYG00000032993	ENSOMYG00000032928	rnf224 (ENSOMYG00000032924)	prpf4 (ENSOMYG00000032829)	cdc26 (ENSOMYG00000075708)	slc31a1 (ENSOMYG00000032732)	atp6v1g1 (ENSOMYG00000032720)	ENSOMYG00000032608 #13	ENSOMYG00000056356	ENSOMYG00000032540	SV2C (ENSOMYG00000060958) #18	F2RL2 (ENSOMYG00000032523) #19	ENSOMYG00000062425	F2R (ENSOMYG00000003544) #21	f2rl1.2 (ENSOMYG00000032514) #22	ch25hl2 (ENSOMYG00000032508)	s100z (ENSOMYG00000032501) #23	crf-bp (ENSOMYG00000071371) #24	aggf1 (ENSOMYG00000032485) #25	PDE8B (ENSOMYG00000032379) #27	otpa (ENSOMYG00000032321) #29	tbca (ENSOMYG00000050741) #30	ENSOMYG00000060792	AP3B1 (ENSOMYG00000030926) #31	SCAMP1 (ENSOMYG00000023337) #33	ENSOMYG00000030518	LHFPL2 (ENSOMYG00000030501) #34	ARSB (ENSOMYG00000030463) #36	DMGDH (ENSOMYG00000030429) #37
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00940000159243	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37
Huchen	MODERN SPECIES	356														ENSHHUG00000004886	F2RL2 (ENSHHUG00000004882) #19	F2R (ENSHHUG00000004876) #21	f2rl1.1 (ENSHHUG00000004874) #22	f2rl1.1 (ENSHHUG00000004873) #22	f2rl1.2 (ENSHHUG00000004795) #22	ch25hl2 (ENSHHUG00000004780)	s100z (ENSHHUG00000004773) #23	crhbp (ENSHHUG00000004761) #24	aggf1 (ENSHHUG00000004753) #25	PDE8B (ENSHHUG00000004183) #27	wdr41 (ENSHHUG00000004143) #28	otpa (ENSHHUG00000004114) #29	tbca (ENSHHUG00000004085) #30	AP3B1 (ENSHHUG00000003988) #31	scamp1 (ENSHHUG00000003948) #33	lhfpl2a (ENSHHUG00000003940) #34	bhmt (ENSHHUG00000003824)
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000159243	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000008186	rnf224 (ENSOMYG00000008166)	ENSOMYG00000054172	ENSOMYG00000008128	cdc26 (ENSOMYG00000008014)	slc31a1 (ENSOMYG00000007997)	vatg1 (ENSOMYG00000007947)	hmgcrb (ENSOMYG00000006390) #12	ENSOMYG00000061878	ENSOMYG00000004355 #13	ENSOMYG00000003693	ENSOMYG00000067030	ENSOMYG00000049365	SV2C (ENSOMYG00000003632) #18	ENSOMYG00000054402	F2R (ENSOMYG00000068290) #21	f2rl1.1 (ENSOMYG00000076572) #22	f2rl1.1 (ENSOMYG00000003516) #22	ch25hl2 (ENSOMYG00000003453)	s100z (ENSOMYG00000003438) #23	crhbp (ENSOMYG00000003389) #24	aggf1 (ENSOMYG00000003353) #25	PDE8B (ENSOMYG00000003268) #27	wdr41 (ENSOMYG00000003184) #28	otpa (ENSOMYG00000003096) #29	tbca (ENSOMYG00000032310) #30	ENSOMYG00000070555	AP3B1 (ENSOMYG00000002708) #31	SCAMP1 (ENSOMYG00000001807) #33	ENSOMYG00000074845	LHFPL2 (ENSOMYG00000001799) #34
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT01060000253486	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00390000009710.a.b #30	ENSGT00940000157603.gb #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT00940000158176.a #37
Coho salmon	MODERN SPECIES	15	stard4 (ENSOKIG00005017832)	ENSOKIG00005017859	pisd (ENSOKIG00005017869)	ENSOKIG00005017904	rnf224 (ENSOKIG00005017908)	ENSOKIG00005017918	slc31a1 (ENSOKIG00005017953)	cdc26 (ENSOKIG00005017973)	atp6v1g1 (ENSOKIG00005017977)	hmgcrb (ENSOKIG00005018005) #12	CERT1 (ENSOKIG00005018187) #13	ENSOKIG00005018354	SV2C (ENSOKIG00005018365) #18	ENSOKIG00005018429	F2RL2 (ENSOKIG00005018438) #19	F2R (ENSOKIG00005018463) #21	f2rl1.1 (ENSOKIG00005018471) #22	f2rl1.1 (ENSOKIG00005018474) #22	f2rl1.2 (ENSOKIG00005018486) #22	ch25hl2 (ENSOKIG00005018528)	s100z (ENSOKIG00005018551) #23	crhbp (ENSOKIG00005018561) #24	aggf1 (ENSOKIG00005018578) #25	PDE8B (ENSOKIG00005018615) #27	wdr41 (ENSOKIG00005018890) #28	otpa (ENSOKIG00005018943) #29	tbca (ENSOKIG00005018976) #30	AP3B1 (ENSOKIG00005019349) #31	SCAMP1 (ENSOKIG00005026634) #33	lhfpl2a (ENSOKIG00005026687) #34	ENSOKIG00005026697
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005001980	ENSOTSG00005001978	pisd (ENSOTSG00005001974)	ENSOTSG00005001972	rnf224 (ENSOTSG00005001971)	ENSOTSG00005001969	prpf4 (ENSOTSG00005001967)	cdc26 (ENSOTSG00005001966)	slc31a1 (ENSOTSG00005001964)	atp6v1g1 (ENSOTSG00005001785)	hmgcrb (ENSOTSG00005036211) #12	CERT1 (ENSOTSG00005035862) #13	ENSOTSG00005035858	SV2C (ENSOTSG00005035394) #18	F2RL2 (ENSOTSG00005035390) #19	F2R (ENSOTSG00005035389) #21	f2rl1.1 (ENSOTSG00005035388) #22	f2rl1.1 (ENSOTSG00005035387) #22	f2rl1.2 (ENSOTSG00005035386) #22	ch25hl2 (ENSOTSG00005035385)	s100z (ENSOTSG00005035384) #23	crhbp (ENSOTSG00005035382) #24	aggf1 (ENSOTSG00005035381) #25	PDE8B (ENSOTSG00005035380) #27	wdr41 (ENSOTSG00005035379) #28	otpa (ENSOTSG00005035378) #29	tbca (ENSOTSG00005035356) #30	ENSOTSG00005035353	DMGDH (ENSOTSG00005033116) #37	bhmt (ENSOTSG00005032687)	JMY (ENSOTSG00005032667)
Salmo	ANCESTRAL SPECIES		ENSGT00940000159243	ENSGT00990000205556.a	ENSGT00520000055626.a.c	ENSGT00390000013484.g	ENSGT00980000198836.d	ENSGT00510000050587.b	ENSGT00940000156006.n.b	ENSGT00390000008457.c	ENSGT00940000155147.i	ENSGT00940000154399.c	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b.c #13	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00950000182940.b.b.f.e #18	ENSGT01050000244840.A.b.b.b.d #19	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c #23	ENSGT00390000001362.b.h #24	ENSGT00730000111121.c #25	ENSGT00940000157817.f #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b.a #29	ENSGT00940000170540	ENSGT00940000157603.fb.a #31	ENSGT00940000157310.g.a #33	ENSGT00990000203589.b.b.h #34	ENSGT01100000263538.A.a.a.b.b.m	ENSGT00940000158176.a #37
River trout	MODERN SPECIES	15	ENSSTUG00000050508	pisd (ENSSTUG00000050513)	ENSSTUG00000050519	ENSSTUG00000050521	rnf224 (ENSSTUG00000050523)	ENSSTUG00000050526	cdc26 (ENSSTUG00000050527)	slc31a1 (ENSSTUG00000050530)	atp6v1g1 (ENSSTUG00000050531)	hmgcrb (ENSSTUG00000035385) #12	CERT1 (ENSSTUG00000036109) #13	ENSSTUG00000038095	SV2C (ENSSTUG00000038115) #18	ENSSTUG00000038453	F2RL2 (ENSSTUG00000038460) #19	F2R (ENSSTUG00000038465) #21	f2rl1.1 (ENSSTUG00000038471) #22	f2rl1.1 (ENSSTUG00000038485) #22	ch25hl2 (ENSSTUG00000038497)	s100z (ENSSTUG00000038505) #23	crhbp (ENSSTUG00000038512) #24	aggf1 (ENSSTUG00000038521) #25	AP3B1 (ENSSTUG00000038574) #31	scamp1 (ENSSTUG00000039388) #33	lhfpl2a (ENSSTUG00000039418) #34	ENSSTUG00000039420	DMGDH (ENSSTUG00000039448) #37	bhmt (ENSSTUG00000040918)	JMY (ENSSTUG00000041093)	HOMER1 (ENSSTUG00000041264)	DTWD2 (ENSSTUG00000041448)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000077582	ENSSSAG00000112208	ENSSSAG00000077592	ENSSSAG00000077599	ENSSSAG00000077607	ENSSSAG00000077616	rnf224 (ENSSSAG00000077619)	prpf4 (ENSSSAG00000104108)	cdc26 (ENSSSAG00000095124)	slc31a1 (ENSSSAG00000077631)	hmdh (ENSSSAG00000077677) #12	ENSSSAG00000082186	ENSSSAG00000078315 #13	ENSSSAG00000078409	F2RL2 (ENSSSAG00000098455) #19	F2R (ENSSSAG00000077489) #21	f2rl1.1 (ENSSSAG00000078421) #22	f2rl1.1 (ENSSSAG00000078417) #22	f2rl1.1 (ENSSSAG00000084722) #22	ch25hl2 (ENSSSAG00000078425)	s100z (ENSSSAG00000120666) #23	crhbp (ENSSSAG00000078436) #24	aggf1 (ENSSSAG00000078440) #25	PDE8B (ENSSSAG00000077426) #27	wdr41 (ENSSSAG00000078906) #28	otp (ENSSSAG00000078916) #29	tbca (ENSSSAG00000078918)	ap3b1 (ENSSSAG00000078995) #31	scamp1 (ENSSSAG00000080106) #33	LHFPL2 (ENSSSAG00000115220) #34	ENSSSAG00000108005
Northern pike	MODERN SPECIES	13	MARVELD2 (ENSELUG00000001231)	stard4 (ENSELUG00000007604)	ENSELUG00000007577	ENSELUG00000007569	pisd (ENSELUG00000007552)	ENSELUG00000007530	rnf224 (ENSELUG00000007522)	cdc26 (ENSELUG00000007352)	prpf4 (ENSELUG00000007510)	atp6v1g1 (ENSELUG00000034652)	hmgcrb (ENSELUG00000007320) #12	CERT1 (ENSELUG00000007230) #13	SV2C (ENSELUG00000007129) #18	F2RL2 (ENSELUG00000007103) #19	f2rl1.1 (ENSELUG00000007001) #22	f2r2.1 (ENSELUG00000007082) #21	f2rl1.1 (ENSELUG00000006993) #22	f2rl1.2 (ENSELUG00000006989) #22	ch25hl2 (ENSELUG00000006977)	s100z (ENSELUG00000006972) #23	crhbp (ENSELUG00000006962) #24	aggf1 (ENSELUG00000000226) #25	PDE8B (ENSELUG00000006875) #27	wdr41 (ENSELUG00000006803) #28	otpa (ENSELUG00000006749) #29	tbca (ENSELUG00000006728) #30	AP3B1 (ENSELUG00000006692) #31	scamp1 (ENSELUG00000006644) #33	lhfpl2a (ENSELUG00000006588) #34	ARSB (ENSELUG00000006567) #36	bhmt (ENSELUG00000006487)
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00670000099470	ENSGT00390000014845	ENSGT00940000166328	ENSGT00510000048902.a.f #9	ENSGT00940000159721.h #10	ENSGT00940000155305.b.b #12	ENSGT00940000155123.b.b #13	ENSGT00950000182940.b.b.f #18	ENSGT01050000244840.A.b.b.b #19	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Otophysi	ANCESTRAL SPECIES	248											ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382
Characiphysae	ANCESTRAL SPECIES	68											ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382
Characiphysae_b	ANCESTRAL SPECIES	73											ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382
Characoidei	ANCESTRAL SPECIES	67											ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603.hb #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000043317	msx2b (ENSAMXG00000041559)	ENSAMXG00000029161	ENSAMXG00000041169	ENSAMXG00000019838	DENND1A (ENSAMXG00000019807)	NEK6 (ENSAMXG00000019792)	psmb7 (ENSAMXG00000036576)	nr5a1b (ENSAMXG00000019765)	OLFML2A (ENSAMXG00000040497)	ENSAMXG00000034277	ENSAMXG00000032401	ENSAMXG00000037670	ENSAMXG00000036268	f2rl1.1 (ENSAMXG00000040817) #22	F2R (ENSAMXG00000032056) #21	ENSAMXG00000039800	f2rl1.1 (ENSAMXG00000038686) #22	f2rl1.1 (ENSAMXG00000033732) #22	f2rl1.1 (ENSAMXG00000032386) #22	f2rl1.1 (ENSAMXG00000029451) #22	f2rl1.1 (ENSAMXG00000029935) #22	f2rl1.1 (ENSAMXG00000019610) #22	f2rl1.1 (ENSAMXG00000035707) #22	f2rl1.1 (ENSAMXG00000041729) #22	f2rl1.2 (ENSAMXG00000041505) #22	ch25hl2 (ENSAMXG00000024958)	s100z (ENSAMXG00000036740) #23	crhbp (ENSAMXG00000019578) #24	aggf1 (ENSAMXG00000042451) #25	PDE8B (ENSAMXG00000019516) #27
Mexicana tetra	MODERN SPECIES	1200																ENSAMXG00000031553 #21
Red-bellied piranha	MODERN SPECIES	1901																f2r2.1 (ENSPNAG00000010761) #21	f2rl1.1 (ENSPNAG00000010768) #22
Electric eel	MODERN SPECIES	1316																f2r2.1 (ENSEEEG00000010836) #21	f2rl1.1 (ENSEEEG00000010834) #22	f2rl1.1 (ENSEEEG00000010833) #22	f2rl1.1 (ENSEEEG00000010831) #22	ENSEEEG00000010828	f2rl1.2 (ENSEEEG00000010827) #22
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00390000018810	ENSGT00950000183015.D	ENSGT00940000153692.A	ENSGT00940000155133.b	ENSGT00390000010355	ENSGT01060000253463	ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT01060000248575.C	ENSGT00940000153391.c.b.a.j.a	ENSGT00940000157936	ENSGT00940000157194.d	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817.c #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000160015	ENSGT00390000008726.h.a	ENSGT00390000006452.b.a	ENSGT00390000017382
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	221																ENSGT01050000244840.A.a.b.f.m.a.a.a #21	ENSGT01090000260030.a.b.a.a.b.b.b.a.b	ENSGT00390000002955.b	ENSGT00940000153372.A.e.a.b.b.h	ENSGT01030000235124.a.a	ENSGT00940000153372.A.e.a.a.b	ENSGT00390000008823	ENSGT00390000009313.ib.b.a.e.b.a.b	ENSGT00390000009313.ib.b.a.f	ENSGT00390000009313.ib.b.b.a.b	ENSGT00390000001566.c	ENSGT00940000157449.d	ENSGT00940000167600.b	ENSGT00940000159129.eb.a	ENSGT00940000156170.k.b	ENSGT01030000234618.E.j.a
Goldfish	MODERN SPECIES	3199																F2R (ENSCARG00000044675) #21	ENSCARG00000044688	ENSCARG00000044698	ENSCARG00000043987	RIC1 (ENSCARG00000044009)	ENSCARG00000044136
Cyprininae_a	ANCESTRAL SPECIES	722																ENSGT01050000244840.A.a.b.f.m.a.a.a #21	ENSGT01090000260030.a.b.a.a.b.b.b.a.b	ENSGT00390000002955.b	ENSGT00940000153372.A.e.a.b.b.h	ENSGT01030000235124.a.a
Common carp reference	MODERN SPECIES	45	ENSCCRG00000047625	ENSCCRG00000067573	ENSCCRG00000046851	ENSCCRG00000057866	ENSCCRG00000056590	ENSCCRG00000022743	ENSCCRG00000077787	ENSCCRG00000062714	ENSCCRG00000075362	ENSCCRG00000068501	ENSCCRG00000071480	ENSCCRG00000053540	ENSCCRG00000057029	ENSCCRG00000056717	ENSCCRG00000024127	ENSCCRG00000021731 #21	ENSCCRG00000055376	ENSCCRG00000031976	ENSCCRG00000028587	ENSCCRG00000061694	ENSCCRG00000029501	zgc:152948 (ENSCCRG00000029498)	ENSCCRG00000066445	ENSCCRG00000077443	ENSCCRG00000055425	ENSCCRG00000081602	ENSCCRG00000000461	ENSCCRG00000029481	ENSCCRG00000081327	ENSCCRG00000013868	wdr91 (ENSCCRG00000029465)
Golden-line barbel	MODERN SPECIES	60	ARHGAP24 (ENSSGRG00000049340)	ENSSGRG00000049372	mapk10 (ENSSGRG00000049430)	ptpn13 (ENSSGRG00000051041)	sdad1 (ENSSGRG00000051393)	ENSSGRG00000051556	CRB2 (ENSSGRG00000051557)	DENND1A (ENSSGRG00000051566)	lhx2a (ENSSGRG00000051632)	NEK6 (ENSSGRG00000051636)	psmb7 (ENSSGRG00000051638)	nr5a1b (ENSSGRG00000051754)	nr6a1b (ENSSGRG00000051757)	OLFML2A (ENSSGRG00000051767)	F2R (ENSSGRG00000051768) #21	F2R (ENSSGRG00000051769) #21	F2R (ENSSGRG00000051770) #21	f2rl1.1 (ENSSGRG00000051772) #22	f2rl1.2 (ENSSGRG00000051773) #22	ch25hl2 (ENSSGRG00000051774)	s100z (ENSSGRG00000051775) #23	crhbp (ENSSGRG00000000115) #24	aggf1 (ENSSGRG00000000196) #25	PDE8B (ENSSGRG00000000287) #27	wdr41 (ENSSGRG00000000371) #28	otpa (ENSSGRG00000000460) #29	ENSSGRG00000000466	AP3B1 (ENSSGRG00000000515) #31	egfl7 (ENSSGRG00000001475)	agpat2 (ENSSGRG00000001488)	dipk1b (ENSSGRG00000001503)
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00940000153692.A.f	ENSGT00940000155133.b.v	ENSGT00390000010355.c	ENSGT00940000153232.b.g	ENSGT00940000160615.a.b	ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c
Goldfish	MODERN SPECIES	13	kcnk15 (ENSCARG00000012606)	col9a3 (ENSCARG00000012611)	ENSCARG00000012628	ENSCARG00000012631	ENSCARG00000012638	hm13 (ENSCARG00000012660)	ENSCARG00000013086	DENND1A (ENSCARG00000013107)	lhx2a (ENSCARG00000013150)	ENSCARG00000013179	psmb7 (ENSCARG00000013272)	nr5a1b (ENSCARG00000013417)	nr6a1b (ENSCARG00000013430)	OLFML2A (ENSCARG00000013453)	F2R (ENSCARG00000013459) #21	ENSCARG00000013464 #21	F2R (ENSCARG00000013473) #21	f2rl1.1 (ENSCARG00000013486) #22	f2rl1.2 (ENSCARG00000013494) #22	ch25hl2 (ENSCARG00000013499)	rnf180b (ENSCARG00000013507)	ENSCARG00000013518	rgs7bpb (ENSCARG00000013527)	C6 (ENSCARG00000013562)	oxct1b (ENSCARG00000014065)	ghrb (ENSCARG00000017221)	ENSCARG00000017233	ENSCARG00000017239	gadd45gb.1 (ENSCARG00000017247)	ppp1r26 (ENSCARG00000017269)	ENSCARG00000017287
Cyprininae_a	ANCESTRAL SPECIES	201							ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000159990.e	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c	ENSGT00390000001362.b.b #24	ENSGT00940000157817.c.a.a #27	ENSGT00390000017026.g #28	ENSGT00940000159952.a.b.d #29	ENSGT00390000009710.d #30	ENSGT00940000157603.lb #31	ENSGT00940000160015.h	ENSGT00390000008726.h.a.b	ENSGT00390000006452.b.a.g	ENSGT00390000017382.k	ENSGT00390000014118.i
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	45	ARHGAP24 (ENSCCRG00000004528)	mapk10 (ENSCCRG00000057165)	ptpn13 (ENSCCRG00000011159)	sdad1 (ENSCCRG00000011377)	ENSCCRG00000034735	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)	dipk1b (ENSCCRG00000056748)	ppp1r26 (ENSCCRG00000014473)
Common carp reference	MODERN SPECIES	45	esm1 (ENSCCRG00000004302)	ARHGAP24 (ENSCCRG00000004528)	mapk10 (ENSCCRG00000057165)	ptpn13 (ENSCCRG00000011159)	sdad1 (ENSCCRG00000011377)	ENSCCRG00000034735	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)	dipk1b (ENSCCRG00000056748)
Golden-line barbel	MODERN SPECIES	69						ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)	agpat2 (ENSSGRG00000033002)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.f.m.a.b.a #21
Goldfish	MODERN SPECIES	17	rsl24d1 (ENSCARG00000023099)	ENSCARG00000023109	ENSCARG00000023113	ENSCARG00000008222	ENSCARG00000008233	NRCAM (ENSCARG00000008288)	ENSCARG00000008432	ENSCARG00000008573	ENSCARG00000009123	irak4 (ENSCARG00000009134)	twf1a (ENSCARG00000009160)	TMEM117 (ENSCARG00000009180)	ENSCARG00000009209	NRCAM (ENSCARG00000009374)	ENSCARG00000013470	F2R (ENSCARG00000013471) #21	ENSCARG00000013476	ENSCARG00000013485	ENSCARG00000013493	ENSCARG00000013501	ENSCARG00000013516	ENSCARG00000013525	ENSCARG00000013533	ENSCARG00000013538	PCLAF (ENSCARG00000013545)	irak4 (ENSCARG00000013558)	twf1a (ENSCARG00000013571)	NELL2 (ENSCARG00000013620)	ENSCARG00000014378	ENSCARG00000014411	szl (ENSCARG00000014419)
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31	ENSGT00940000160015.g	ENSGT00390000008726.h.a.a
Common carp reference	MODERN SPECIES	37									ENSCCRG00000027865	ENSCCRG00000015092	zgc:114188 (ENSCCRG00000070532)	ENSCCRG00000074789	ENSCCRG00000043775	ENSCCRG00000031313	ENSCCRG00000072499	ENSCCRG00000074964 #21	ENSCCRG00000070706	ENSCCRG00000057614	ENSCCRG00000044598	ENSCCRG00000082132	ENSCCRG00000007699	ENSCCRG00000003547	ENSCCRG00000067287	ENSCCRG00000054728	ENSCCRG00000034095	ENSCCRG00000066735	ENSCCRG00000072022	ENSCCRG00000009934	ENSCCRG00000065913	PRICKLE1 (ENSCCRG00000052041)	ADAMTS20 (ENSCCRG00000050164)
Golden-line barbel	MODERN SPECIES	60	ENSSGRG00000049372	mapk10 (ENSSGRG00000049430)	ptpn13 (ENSSGRG00000051041)	sdad1 (ENSSGRG00000051393)	ENSSGRG00000051556	CRB2 (ENSSGRG00000051557)	DENND1A (ENSSGRG00000051566)	lhx2a (ENSSGRG00000051632)	NEK6 (ENSSGRG00000051636)	psmb7 (ENSSGRG00000051638)	nr5a1b (ENSSGRG00000051754)	nr6a1b (ENSSGRG00000051757)	OLFML2A (ENSSGRG00000051767)	F2R (ENSSGRG00000051768) #21	F2R (ENSSGRG00000051769) #21	F2R (ENSSGRG00000051770) #21	f2rl1.1 (ENSSGRG00000051772) #22	f2rl1.2 (ENSSGRG00000051773) #22	ch25hl2 (ENSSGRG00000051774)	s100z (ENSSGRG00000051775) #23	crhbp (ENSSGRG00000000115) #24	aggf1 (ENSSGRG00000000196) #25	PDE8B (ENSSGRG00000000287) #27	wdr41 (ENSSGRG00000000371) #28	otpa (ENSSGRG00000000460) #29	ENSSGRG00000000466	AP3B1 (ENSSGRG00000000515) #31	egfl7 (ENSSGRG00000001475)	agpat2 (ENSSGRG00000001488)	dipk1b (ENSSGRG00000001503)	mrps2 (ENSSGRG00000001507)
Cyprininae	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.f.m.a.b.b #21
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31	ENSGT00940000160015.g	ENSGT00390000008726.h.a.a	ENSGT00390000006452.b.a.h	ENSGT00390000017382.l	ENSGT00390000014118.j	ENSGT00940000156959.A.c.a.a
Common carp reference	MODERN SPECIES	38	sdad1 (ENSCCRG00000052504)	ENSCCRG00000077647	ENSCCRG00000054544	ENSCCRG00000023244	ENSCCRG00000023239	ENSCCRG00000023193	lhx2a (ENSCCRG00000046488)	psmb7 (ENSCCRG00000074098)	NEK6 (ENSCCRG00000046205)	nr5a1b (ENSCCRG00000016558)	nr6a1b (ENSCCRG00000041881)	ENSCCRG00000074926	F2R (ENSCCRG00000059546) #21	F2R (ENSCCRG00000077171) #21	F2R (ENSCCRG00000037167) #21	ENSCCRG00000055039 #21	f2rl1.1 (ENSCCRG00000081208) #22	S100Z (ENSCCRG00000058180) #23	ch25hl2 (ENSCCRG00000059117)	aggf1 (ENSCCRG00000036413) #25	crhbp (ENSCCRG00000029542) #24	PDE8B (ENSCCRG00000052016) #27	wdr41 (ENSCCRG00000080357) #28	otpa (ENSCCRG00000031449) #29	tbca (ENSCCRG00000071108) #30	AP3B1 (ENSCCRG00000072213) #31	egfl7 (ENSCCRG00000007399)	agpat2 (ENSCCRG00000065975)	dipk1b (ENSCCRG00000061312)	ppp1r26 (ENSCCRG00000077967)	olfm1b (ENSCCRG00000027210)
Golden-line barbel	MODERN SPECIES	69				ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)	agpat2 (ENSSGRG00000033002)	dipk1b (ENSSGRG00000033004)	mrps2 (ENSSGRG00000033007)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	447		ENSGT00390000018810.b	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000159990.e	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00390000018810.b	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31
Common carp reference	MODERN SPECIES	38	mapk10 (ENSCCRG00000002559)	ptpn13 (ENSCCRG00000004583)	sdad1 (ENSCCRG00000052504)	ENSCCRG00000077647	ENSCCRG00000054544	ENSCCRG00000023244	ENSCCRG00000023239	ENSCCRG00000023193	lhx2a (ENSCCRG00000046488)	psmb7 (ENSCCRG00000074098)	NEK6 (ENSCCRG00000046205)	nr5a1b (ENSCCRG00000016558)	nr6a1b (ENSCCRG00000041881)	ENSCCRG00000074926	F2R (ENSCCRG00000059546) #21	F2R (ENSCCRG00000077171) #21	F2R (ENSCCRG00000037167) #21	ENSCCRG00000055039 #21	f2rl1.1 (ENSCCRG00000081208) #22	S100Z (ENSCCRG00000058180) #23	ch25hl2 (ENSCCRG00000059117)	aggf1 (ENSCCRG00000036413) #25	crhbp (ENSCCRG00000029542) #24	PDE8B (ENSCCRG00000052016) #27	wdr41 (ENSCCRG00000080357) #28	otpa (ENSCCRG00000031449) #29	tbca (ENSCCRG00000071108) #30	AP3B1 (ENSCCRG00000072213) #31	egfl7 (ENSCCRG00000007399)	agpat2 (ENSCCRG00000065975)	dipk1b (ENSCCRG00000061312)
Goldfish	MODERN SPECIES	40	ARHGAP24 (ENSCARG00000020380)	mapk10 (ENSCARG00000017060)	ptpn13 (ENSCARG00000016696)	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181
Cyprininae	ANCESTRAL SPECIES	447	ENSGT00390000018810.b	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000159990.e	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	40	mapk10 (ENSCARG00000017060)	ptpn13 (ENSCARG00000016696)	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181	prdx5 (ENSCARG00000069176)
Goldfish	MODERN SPECIES	40	ptpn13 (ENSCARG00000016696)	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181	prdx5 (ENSCARG00000069176)	ENSCARG00000069126
Goldfish	MODERN SPECIES	40	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187	ENSCARG00000069181	prdx5 (ENSCARG00000069176)	ENSCARG00000069126	bscl2 (ENSCARG00000069099)
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540	ENSGT00940000157603.mb #31	ENSGT00940000160015.g
Common carp reference	MODERN SPECIES	38	ptpn13 (ENSCCRG00000004583)	sdad1 (ENSCCRG00000052504)	ENSCCRG00000077647	ENSCCRG00000054544	ENSCCRG00000023244	ENSCCRG00000023239	ENSCCRG00000023193	lhx2a (ENSCCRG00000046488)	psmb7 (ENSCCRG00000074098)	NEK6 (ENSCCRG00000046205)	nr5a1b (ENSCCRG00000016558)	nr6a1b (ENSCCRG00000041881)	ENSCCRG00000074926	F2R (ENSCCRG00000059546) #21	F2R (ENSCCRG00000077171) #21	F2R (ENSCCRG00000037167) #21	ENSCCRG00000055039 #21	f2rl1.1 (ENSCCRG00000081208) #22	S100Z (ENSCCRG00000058180) #23	ch25hl2 (ENSCCRG00000059117)	aggf1 (ENSCCRG00000036413) #25	crhbp (ENSCCRG00000029542) #24	PDE8B (ENSCCRG00000052016) #27	wdr41 (ENSCCRG00000080357) #28	otpa (ENSCCRG00000031449) #29	tbca (ENSCCRG00000071108) #30	AP3B1 (ENSCCRG00000072213) #31	egfl7 (ENSCCRG00000007399)	agpat2 (ENSCCRG00000065975)	dipk1b (ENSCCRG00000061312)	ppp1r26 (ENSCCRG00000077967)
Cyprininae	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.f.m.b.a.b #21
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.f.m.b.a.b #21
Golden-line barbel	MODERN SPECIES	69					ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)	agpat2 (ENSSGRG00000033002)	dipk1b (ENSSGRG00000033004)
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00940000155133.b.v	ENSGT00390000010355.c	ENSGT00940000153232.b.g	ENSGT00940000160615.a.b	ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c
Goldfish	MODERN SPECIES	13	col9a3 (ENSCARG00000012611)	ENSCARG00000012628	ENSCARG00000012631	ENSCARG00000012638	hm13 (ENSCARG00000012660)	ENSCARG00000013086	DENND1A (ENSCARG00000013107)	lhx2a (ENSCARG00000013150)	ENSCARG00000013179	psmb7 (ENSCARG00000013272)	nr5a1b (ENSCARG00000013417)	nr6a1b (ENSCARG00000013430)	OLFML2A (ENSCARG00000013453)	F2R (ENSCARG00000013459) #21	ENSCARG00000013464 #21	F2R (ENSCARG00000013473) #21	f2rl1.1 (ENSCARG00000013486) #22	f2rl1.2 (ENSCARG00000013494) #22	ch25hl2 (ENSCARG00000013499)	rnf180b (ENSCARG00000013507)	ENSCARG00000013518	rgs7bpb (ENSCARG00000013527)	C6 (ENSCARG00000013562)	oxct1b (ENSCARG00000014065)	ghrb (ENSCARG00000017221)	ENSCARG00000017233	ENSCARG00000017239	gadd45gb.1 (ENSCARG00000017247)	ppp1r26 (ENSCARG00000017269)	ENSCARG00000017287	LOXHD1 (ENSCARG00000017340)
Cyprininae_a	ANCESTRAL SPECIES	201						ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000159990.e	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c	ENSGT00390000001362.b.b #24	ENSGT00940000157817.c.a.a #27	ENSGT00390000017026.g #28	ENSGT00940000159952.a.b.d #29	ENSGT00390000009710.d #30	ENSGT00940000157603.lb #31	ENSGT00940000160015.h	ENSGT00390000008726.h.a.b	ENSGT00390000006452.b.a.g	ENSGT00390000017382.k	ENSGT00390000014118.i	ENSGT00940000156959.A.c.a.b
Common carp reference	MODERN SPECIES	45	mapk10 (ENSCCRG00000057165)	ptpn13 (ENSCCRG00000011159)	sdad1 (ENSCCRG00000011377)	ENSCCRG00000034735	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)	dipk1b (ENSCCRG00000056748)	ppp1r26 (ENSCCRG00000014473)	olfm1b (ENSCCRG00000060118)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00950000183015.D.l	ENSGT00940000153692.A.f	ENSGT00940000155133.b.v	ENSGT00390000010355.c	ENSGT00940000153232.b.g	ENSGT00940000160615.a.b	ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	201								ENSGT00940000155152.e	ENSGT00940000156261.fb	ENSGT00940000158821.r.a	ENSGT00940000159990.e	ENSGT00940000157419.u	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157936.o.a	ENSGT00940000157194.d.b	ENSGT01050000244840.A.a.b.f.n.a.a #21	ENSGT01050000244840.A.a.b.f.m.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.b.b #21	ENSGT01050000244840.A.a.a.h.a.q #22	ENSGT01050000244840.A.a.a.h.b.d #22	ENSGT00940000163793.A.a.c	ENSGT00390000001362.b.b #24	ENSGT00940000157817.c.a.a #27	ENSGT00390000017026.g #28	ENSGT00940000159952.a.b.d #29	ENSGT00390000009710.d #30	ENSGT00940000157603.lb #31	ENSGT00940000160015.h	ENSGT00390000008726.h.a.b	ENSGT00390000006452.b.a.g	ENSGT00390000017382.k
Common carp reference	MODERN SPECIES	45	ENSCCRG00000080667	esm1 (ENSCCRG00000004302)	ARHGAP24 (ENSCCRG00000004528)	mapk10 (ENSCCRG00000057165)	ptpn13 (ENSCCRG00000011159)	sdad1 (ENSCCRG00000011377)	ENSCCRG00000034735	crb2a (ENSCCRG00000023226)	DENND1A (ENSCCRG00000068812)	lhx2a (ENSCCRG00000042585)	NEK6 (ENSCCRG00000054124)	psmb7 (ENSCCRG00000046505)	nr5a1b (ENSCCRG00000025089)	nr6a1b (ENSCCRG00000051533)	ENSCCRG00000050743	ENSCCRG00000016518 #21	ENSCCRG00000043469 #21	ENSCCRG00000046911 #21	ENSCCRG00000066924 #21	f2rl1.1 (ENSCCRG00000046913) #22	ch25hl2 (ENSCCRG00000057335)	ch25hl2 (ENSCCRG00000046882)	f2rl1.2 (ENSCCRG00000046917) #22	crhbp (ENSCCRG00000029549) #24	PDE8B (ENSCCRG00000031050) #27	wdr41 (ENSCCRG00000031425) #28	otpa (ENSCCRG00000031496) #29	tbca (ENSCCRG00000031464) #30	AP3B1 (ENSCCRG00000023767) #31	egfl7 (ENSCCRG00000014498)	agpat2 (ENSCCRG00000014492)
Golden-line barbel	MODERN SPECIES	69								ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b.f.n.a.b #21
Golden-line barbel	MODERN SPECIES	69							ENSSGRG00000030701	DENND1A (ENSSGRG00000030704)	NEK6 (ENSSGRG00000030791)	psmb7 (ENSSGRG00000030857)	nr5a1b (ENSSGRG00000031464)	nr6a1b (ENSSGRG00000031472)	OLFML2A (ENSSGRG00000031473)	ENSSGRG00000031475	F2R (ENSSGRG00000031476) #21	F2R (ENSSGRG00000031477) #21	F2R (ENSSGRG00000031478) #21	F2R (ENSSGRG00000031479) #21	ENSSGRG00000031480 #21	f2rl1.1 (ENSSGRG00000031481) #22	f2rl1.2 (ENSSGRG00000031482) #22	ch25hl2 (ENSSGRG00000031483)	ENSSGRG00000031484	crhbp (ENSSGRG00000031485) #24	ENSSGRG00000031486	PDE8B (ENSSGRG00000031487) #27	wdr41 (ENSSGRG00000031551) #28	otpa (ENSSGRG00000031650) #29	tbca (ENSSGRG00000031651) #30	AP3B1 (ENSSGRG00000031667) #31	egfl7 (ENSSGRG00000032997)
Goldfish	MODERN SPECIES	13	lsm14b (ENSCARG00000012598)	kcnk15 (ENSCARG00000012606)	col9a3 (ENSCARG00000012611)	ENSCARG00000012628	ENSCARG00000012631	ENSCARG00000012638	hm13 (ENSCARG00000012660)	ENSCARG00000013086	DENND1A (ENSCARG00000013107)	lhx2a (ENSCARG00000013150)	ENSCARG00000013179	psmb7 (ENSCARG00000013272)	nr5a1b (ENSCARG00000013417)	nr6a1b (ENSCARG00000013430)	OLFML2A (ENSCARG00000013453)	F2R (ENSCARG00000013459) #21	ENSCARG00000013464 #21	F2R (ENSCARG00000013473) #21	f2rl1.1 (ENSCARG00000013486) #22	f2rl1.2 (ENSCARG00000013494) #22	ch25hl2 (ENSCARG00000013499)	rnf180b (ENSCARG00000013507)	ENSCARG00000013518	rgs7bpb (ENSCARG00000013527)	C6 (ENSCARG00000013562)	oxct1b (ENSCARG00000014065)	ghrb (ENSCARG00000017221)	ENSCARG00000017233	ENSCARG00000017239	gadd45gb.1 (ENSCARG00000017247)	ppp1r26 (ENSCARG00000017269)
Cyprininae	ANCESTRAL SPECIES	447			ENSGT00390000018810.b	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000159990.e	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Goldfish	MODERN SPECIES	40	esm1 (ENSCARG00000020422)	ARHGAP24 (ENSCARG00000020380)	mapk10 (ENSCARG00000017060)	ptpn13 (ENSCARG00000016696)	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)	nr6a1b (ENSCARG00000015425)	OLFML2A (ENSCARG00000015409)	F2R (ENSCARG00000015398) #21	F2R (ENSCARG00000015385) #21	F2R (ENSCARG00000015381) #21	F2R (ENSCARG00000015375) #21	F2R (ENSCARG00000015371) #21	f2rl1.1 (ENSCARG00000015365) #22	f2rl1.2 (ENSCARG00000015363) #22	ch25hl2 (ENSCARG00000015358)	s100z (ENSCARG00000015351) #23	crhbp (ENSCARG00000015341) #24	dipk1b (ENSCARG00000015305)	mrps2 (ENSCARG00000015292)	ppp1r26 (ENSCARG00000015289)	ENSCARG00000069244	stx5al (ENSCARG00000069200)	ENSCARG00000069187
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00940000166813	ENSGT00390000018810.b	ENSGT00950000183015.D.k	ENSGT00940000153692.A.e	ENSGT00940000155133.b.u	ENSGT00390000010355.d	ENSGT00940000153232.b.h	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261.gb	ENSGT00940000158821.r.b	ENSGT00940000159990.f	ENSGT00940000157419.v	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157936.o.b	ENSGT00940000157194.d.a	ENSGT01050000244840.A.a.b.f.n.b #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.a #21	ENSGT01050000244840.A.a.b.f.m.b.a.a.b #21	ENSGT01050000244840.A.a.b.f.m.a.b.a #21	ENSGT01050000244840.A.a.a.h.a.r #22	ENSGT01050000244840.A.a.a.h.b.c #22	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.b.f.m.a.b.b #21	ENSGT00940000161125 #23	ENSGT00390000001362.b.a #24	ENSGT00730000111121 #25	ENSGT00940000157817.c.b #27	ENSGT00940000157817.c.a.b #27	ENSGT00390000017026.h #28	ENSGT00940000159952.a.b.c #29	ENSGT00940000170540
Common carp reference	MODERN SPECIES	38	ARHGAP24 (ENSCCRG00000004310)	mapk10 (ENSCCRG00000002559)	ptpn13 (ENSCCRG00000004583)	sdad1 (ENSCCRG00000052504)	ENSCCRG00000077647	ENSCCRG00000054544	ENSCCRG00000023244	ENSCCRG00000023239	ENSCCRG00000023193	lhx2a (ENSCCRG00000046488)	psmb7 (ENSCCRG00000074098)	NEK6 (ENSCCRG00000046205)	nr5a1b (ENSCCRG00000016558)	nr6a1b (ENSCCRG00000041881)	ENSCCRG00000074926	F2R (ENSCCRG00000059546) #21	F2R (ENSCCRG00000077171) #21	F2R (ENSCCRG00000037167) #21	ENSCCRG00000055039 #21	f2rl1.1 (ENSCCRG00000081208) #22	S100Z (ENSCCRG00000058180) #23	ch25hl2 (ENSCCRG00000059117)	aggf1 (ENSCCRG00000036413) #25	crhbp (ENSCCRG00000029542) #24	PDE8B (ENSCCRG00000052016) #27	wdr41 (ENSCCRG00000080357) #28	otpa (ENSCCRG00000031449) #29	tbca (ENSCCRG00000071108) #30	AP3B1 (ENSCCRG00000072213) #31	egfl7 (ENSCCRG00000007399)	agpat2 (ENSCCRG00000065975)
Golden-line barbel	MODERN SPECIES	60	esm1 (ENSSGRG00000049337)	ARHGAP24 (ENSSGRG00000049340)	ENSSGRG00000049372	mapk10 (ENSSGRG00000049430)	ptpn13 (ENSSGRG00000051041)	sdad1 (ENSSGRG00000051393)	ENSSGRG00000051556	CRB2 (ENSSGRG00000051557)	DENND1A (ENSSGRG00000051566)	lhx2a (ENSSGRG00000051632)	NEK6 (ENSSGRG00000051636)	psmb7 (ENSSGRG00000051638)	nr5a1b (ENSSGRG00000051754)	nr6a1b (ENSSGRG00000051757)	OLFML2A (ENSSGRG00000051767)	F2R (ENSSGRG00000051768) #21	F2R (ENSSGRG00000051769) #21	F2R (ENSSGRG00000051770) #21	f2rl1.1 (ENSSGRG00000051772) #22	f2rl1.2 (ENSSGRG00000051773) #22	ch25hl2 (ENSSGRG00000051774)	s100z (ENSSGRG00000051775) #23	crhbp (ENSSGRG00000000115) #24	aggf1 (ENSSGRG00000000196) #25	PDE8B (ENSSGRG00000000287) #27	wdr41 (ENSSGRG00000000371) #28	otpa (ENSSGRG00000000460) #29	ENSSGRG00000000466	AP3B1 (ENSSGRG00000000515) #31	egfl7 (ENSSGRG00000001475)	agpat2 (ENSSGRG00000001488)
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	13	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31	ENSDARG00000110056 #31	egfl7 (ENSDARG00000100657)	agpat2 (ENSDARG00000101139)
Zebrafish	MODERN SPECIES	13	ptpn13 (ENSDARG00000103699)	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31	ENSDARG00000110056 #31	egfl7 (ENSDARG00000100657)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	13	mapk10 (ENSDARG00000102730)	ptpn13 (ENSDARG00000103699)	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31	ENSDARG00000110056 #31
Zebrafish	MODERN SPECIES	13	esm1 (ENSDARG00000104370)	ARHGAP24 (ENSDARG00000100973)	mapk10 (ENSDARG00000102730)	ptpn13 (ENSDARG00000103699)	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30
Zebrafish	MODERN SPECIES	13	ARHGAP24 (ENSDARG00000100973)	mapk10 (ENSDARG00000102730)	ptpn13 (ENSDARG00000103699)	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29	tbca (ENSDARG00000016754) #30	AP3B1 (ENSDARG00000100082) #31
Zebrafish	MODERN SPECIES	13	ENSDARG00000098906	esm1 (ENSDARG00000104370)	ARHGAP24 (ENSDARG00000100973)	mapk10 (ENSDARG00000102730)	ptpn13 (ENSDARG00000103699)	sdad1 (ENSDARG00000105117)	ENSDARG00000055550	crb2a (ENSDARG00000060106)	DENND1A (ENSDARG00000014592)	lhx2a (ENSDARG00000037964)	NEK6 (ENSDARG00000037963)	psmb7 (ENSDARG00000037962)	nr5a1b (ENSDARG00000023362)	nr6a1b (ENSDARG00000014480)	OLFML2A (ENSDARG00000113533)	F2R (ENSDARG00000059507) #21	F2R (ENSDARG00000087469) #21	F2R (ENSDARG00000090041) #21	F2R (ENSDARG00000086236) #21	f2r2.1 (ENSDARG00000077638) #21	F2R (ENSDARG00000086262) #21	f2rl1.1 (ENSDARG00000068856) #22	f2rl1.2 (ENSDARG00000077540) #22	ENSDARG00000114567	ch25hl2 (ENSDARG00000038728)	s100z (ENSDARG00000038729) #23	crhbp (ENSDARG00000024831) #24	aggf1 (ENSDARG00000060109) #25	PDE8B (ENSDARG00000063706) #27	wdr41 (ENSDARG00000009851) #28	otpa (ENSDARG00000014201) #29
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	39	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a.g #9	ENSGT00940000159721.f #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00950000182940.b.b.g #18	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.a.b.g #21	ENSGT01050000244840.A.a.a.h.b #22	ENSGT00940000159952.a.a #29
Asian bonytongue	MODERN SPECIES	8	LOXHD1 (ENSSFOG00015022217)	ENSSFOG00015032902	ptger4a (ENSSFOG00015027210)	MAP1B (ENSSFOG00015023262)	mrps27 (ENSSFOG00015023271)	btf3 (ENSSFOG00015031532)	ENC1 (ENSSFOG00015031976)	ENSSFOG00015030378 #9	GCNT4 (ENSSFOG00015023290) #10	ENSSFOG00015030013	CERT1 (ENSSFOG00015023300) #13	POLK (ENSSFOG00015023341) #14	ANKDD1B (ENSSFOG00015023354) #15	sv2ca (ENSSFOG00015023367) #18	iqgap2 (ENSSFOG00015023423) ##20	f2r (ENSSFOG00015023476) #21	f2rl1.2 (ENSSFOG00015033232) #22	otpb (ENSSFOG00015023483) #29	scamp1 (ENSSFOG00015005381) #33	LHFPL2 (ENSSFOG00015005391) #34	JMY (ENSSFOG00015005414)	homer1b (ENSSFOG00015005422)	cmya5 (ENSSFOG00015005457)	mtx3 (ENSSFOG00015005510)	thbs4a (ENSSFOG00015005554)	serinc5 (ENSSFOG00015005644)	cdk7 (ENSSFOG00015005692)	SETBP1 (ENSSFOG00015005729)	slc14a2 (ENSSFOG00015005736)	ccdc65 (ENSSFOG00015005750)	lnpep (ENSSFOG00015005868)
P. kingsleyae	MODERN SPECIES	548													sv2ca (ENSPKIG00000011027) #18	iqgap2 (ENSPKIG00000011077) ##20	ENSPKIG00000011129	f2r (ENSPKIG00000011142) #21	f2rl1.2 (ENSPKIG00000011155) #22	OTP (ENSPKIG00000011167) #29
Osteoglossiformes	ANCESTRAL SPECIES	83													ENSGT00940000164571	ENSGT00950000182940.b.b.h #18	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b.h #21	ENSGT01050000244840.A.a.a.h.a #22	ENSGT00940000163793.A.a	ENSGT00940000161125 #23	ENSGT00390000001362.b #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952.a.b #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.j #33	ENSGT00990000203589.b.b.d #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.a
Asian bonytongue	MODERN SPECIES	21	BTF3 (ENSSFOG00015015647)	ankra2 (ENSSFOG00015015678)	utp15 (ENSSFOG00015015712)	ARHGEF28 (ENSSFOG00015015817)	ENC1 (ENSSFOG00015025627)	hexb (ENSSFOG00015015989)	gfm2 (ENSSFOG00015016059)	nsa2 (ENSSFOG00015016191) #7	fam169aa (ENSSFOG00015016217) #9	GCNT4 (ENSSFOG00015016238) #10	hmgcra (ENSSFOG00015016250) #12	ENSSFOG00015016294 #13	ENSSFOG00015016366	SV2C (ENSSFOG00015016383) #18	F2RL2 (ENSSFOG00015029501) #19	F2R (ENSSFOG00015028768) #21	f2rl1.1 (ENSSFOG00015016419) #22	ch25hl2 (ENSSFOG00015028366)	ENSSFOG00015016427	s100z (ENSSFOG00015016441) #23	crhbp (ENSSFOG00015016445) #24	aggf1 (ENSSFOG00015016459) #25	PDE8B (ENSSFOG00015016473) #27	wdr41 (ENSSFOG00015016506) #28	otpa (ENSSFOG00015016563) #29	tbca (ENSSFOG00015030159) #30	AP3B1 (ENSSFOG00015016624) #31	SCAMP1 (ENSSFOG00015016716) #33	lhfpl2a (ENSSFOG00015031014) #34	ARSB (ENSSFOG00015016765) #36	DMGDH (ENSSFOG00015016787) #37
P. kingsleyae	MODERN SPECIES	2	ankra2 (ENSPKIG00000019426)	utp15 (ENSPKIG00000019386)	ARHGEF28 (ENSPKIG00000019115)	ENC1 (ENSPKIG00000019024)	hexb (ENSPKIG00000018938)	gfm2 (ENSPKIG00000018878)	nsa2 (ENSPKIG00000018852) #7	FAM169A (ENSPKIG00000018819) #9	GCNT4 (ENSPKIG00000018802) #10	hmgcra (ENSPKIG00000018702) #12	ENSPKIG00000018585 #13	ENSPKIG00000018516	ENSPKIG00000018484	SV2C (ENSPKIG00000018429) #18	F2RL2 (ENSPKIG00000018396) #19	F2R (ENSPKIG00000018365) #21	f2rl1.2 (ENSPKIG00000018335) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.2 (ENSPKIG00000018301) #22	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247) #23	crhbp (ENSPKIG00000018218) #24	aggf1 (ENSPKIG00000018193) #25	PDE8B (ENSPKIG00000018112) #27	wdr41 (ENSPKIG00000018046) #28	otpa (ENSPKIG00000018024) #29	tbca (ENSPKIG00000018004) #30	AP3B1 (ENSPKIG00000017939) #31	SCAMP1 (ENSPKIG00000017903) #33
Reedfish	MODERN SPECIES	15	gfm2 (ENSECRG00000015932)	nsa2 (ENSECRG00000016209) #7	FAM169A (ENSECRG00000016228) #9	gcnt4a (ENSECRG00000016254) #10	ENSECRG00000016271	hmgcra (ENSECRG00000016297) #12	CERT1 (ENSECRG00000016356) #13	POLK (ENSECRG00000016538) #14	ANKDD1B (ENSECRG00000016596) #15	ENSECRG00000016654	ENSECRG00000016683	ENSECRG00000016694	sv2ca (ENSECRG00000016710) #18	iqgap2 (ENSECRG00000016760) ##20	F2RL2 (ENSECRG00000004843) #19	f2r2.1 (ENSECRG00000004853) #21	f2rl1.1 (ENSECRG00000004864) #22	ch25hl2 (ENSECRG00000004872)	ENSECRG00000004877	s100z (ENSECRG00000004884) #23	crhbp (ENSECRG00000004895) #24	aggf1 (ENSECRG00000004908) #25	PDE8B (ENSECRG00000004936) #27	wdr41 (ENSECRG00000004971) #28	otpa (ENSECRG00000004985) #29	tbca (ENSECRG00000004988) #30	AP3B1 (ENSECRG00000005004) #31	scamp1 (ENSECRG00000005024) #33	lhfpl2a (ENSECRG00000005036) #34	ARSB (ENSECRG00000005042) #36	DMGDH (ENSECRG00000005056) #37
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Amniota	ANCESTRAL SPECIES	4	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Mammalia	ANCESTRAL SPECIES	10	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Theria	ANCESTRAL SPECIES	11	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Eutheria	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Atlantogenata	ANCESTRAL SPECIES		ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Elephant	MODERN SPECIES	526	ENC1 (ENSLAFG00000007895)	HEXB (ENSLAFG00000018570)	GFM2 (ENSLAFG00000018575)	ENSLAFG00000009910 ##7	FAM169A (ENSLAFG00000009907) #9	GCNT4 (ENSLAFG00000027464) #10	ENSLAFG00000026415 #11	HMGCR (ENSLAFG00000013291) #12	CERT1 (ENSLAFG00000013294) #13	POLK (ENSLAFG00000013297) #14	ANKDD1B (ENSLAFG00000020937) #15	POC5 (ENSLAFG00000014703) #16	SV2C (ENSLAFG00000003003) #18	IQGAP2 (ENSLAFG00000000760) #20	F2RL2 (ENSLAFG00000029045) #19	F2R (ENSLAFG00000003741) #21	F2RL1 (ENSLAFG00000001287) #22	S100Z (ENSLAFG00000013035) #23	CRHBP (ENSLAFG00000013037) #24	ENSLAFG00000027371	AGGF1 (ENSLAFG00000012029) #25	ZBED3 (ENSLAFG00000001192) #26	PDE8B (ENSLAFG00000015612) #27	WDR41 (ENSLAFG00000005066) #28	OTP (ENSLAFG00000007704) #29	TBCA (ENSLAFG00000005316) #30	AP3B1 (ENSLAFG00000010496) #31	SCAMP1 (ENSLAFG00000009372) #33	LHFPL2 (ENSLAFG00000009378) #34	ARSB (ENSLAFG00000018055) #36	DMGDH (ENSLAFG00000018061) #37
Hyrax	MODERN SPECIES	7186													ENSPCAG00000002114	IQGAP2 (ENSPCAG00000002145) #20	F2RL2 (ENSPCAG00000002308) #19	ENSPCAG00000002325 #21
Xenarthra	ANCESTRAL SPECIES	234							ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26
Sloth	MODERN SPECIES	6513																F2R (ENSCHOG00000010991) #21
Armadillo	MODERN SPECIES	2327					ENSDNOG00000001464	HMGCR (ENSDNOG00000006472) #12	CERT1 (ENSDNOG00000037153) #13	POLK (ENSDNOG00000003405) #14	ANKDD1B (ENSDNOG00000025636) #15	POC5 (ENSDNOG00000010175) #16	ENSDNOG00000035029	ENSDNOG00000034724	SV2C (ENSDNOG00000005312) #18	IQGAP2 (ENSDNOG00000005342) #20	F2RL2 (ENSDNOG00000035458) #19	F2R (ENSDNOG00000047767) #21	F2RL1 (ENSDNOG00000010306) #22	S100Z (ENSDNOG00000002472) #23	CRHBP (ENSDNOG00000015234) #24	AGGF1 (ENSDNOG00000018473) #25	ZBED3 (ENSDNOG00000041041) #26	ENSDNOG00000049258	ENSDNOG00000038167
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00950000185529	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Primates	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.f #30	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.e #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Greater bamboo lemur	MODERN SPECIES	704							HMGCR (ENSPSMG00000006165) #12	CERT1 (ENSPSMG00000006506) #13	POLK (ENSPSMG00000007161) #14	ANKDD1B (ENSPSMG00000007381) #15	POC5 (ENSPSMG00000007439) #16	ENSPSMG00000007465	SV2C (ENSPSMG00000007473) #18	IQGAP2 (ENSPSMG00000007684) #20	F2RL2 (ENSPSMG00000007726) #19	F2R (ENSPSMG00000007744) #21
Mouse lemur	MODERN SPECIES	3	HEXB (ENSMICG00000032021)	GFM2 (ENSMICG00000000749)	ENSMICG00000027319 ##7	FAM169A (ENSMICG00000000753) #9	GCNT4 (ENSMICG00000014409) #10	ANKRD31 (ENSMICG00000014418) #11	HMGCR (ENSMICG00000014536) #12	CERT1 (ENSMICG00000028951) #13	POLK (ENSMICG00000000006) #14	ANKDD1B (ENSMICG00000031448) #15	ENSMICG00000006494 #16	ENSMICG00000044813	SV2C (ENSMICG00000007347) #18	F2RL2 (ENSMICG00000036441) #19	IQGAP2 (ENSMICG00000007353) #20	F2R (ENSMICG00000029417) #21	F2RL1 (ENSMICG00000032411) #22	S100Z (ENSMICG00000026826) #23	CRHBP (ENSMICG00000034984) #24	AGGF1 (ENSMICG00000028679) #25	PDE8B (ENSMICG00000016635) #27	WDR41 (ENSMICG00000016642) #28	OTP (ENSMICG00000030234) #29	ENSMICG00000016668 #30	ENSMICG00000044997	ERCC8 (ENSMICG00000008906)	ELOVL7 (ENSMICG00000042937)	DEPDC1B (ENSMICG00000013552)	ENSMICG00000045425	ENSMICG00000031463	ENSMICG00000029043
Bushbaby	MODERN SPECIES	132	ENC1 (ENSOGAG00000008956)	HEXB (ENSOGAG00000008957)	GFM2 (ENSOGAG00000008961)	FAM169A (ENSOGAG00000006270) #9	GCNT4 (ENSOGAG00000011857) #10	ENSOGAG00000028567 #11	HMGCR (ENSOGAG00000003776) #12	CERT1 (ENSOGAG00000003782) #13	POLK (ENSOGAG00000007007) #14	ANKDD1B (ENSOGAG00000007012) #15	POC5 (ENSOGAG00000016674) #16	SV2C (ENSOGAG00000013571) #18	ENSOGAG00000012074	IQGAP2 (ENSOGAG00000013579) #20	F2RL2 (ENSOGAG00000030469) #19	F2R (ENSOGAG00000013594) #21	F2RL1 (ENSOGAG00000001151) #22	S100Z (ENSOGAG00000027239) #23	CRHBP (ENSOGAG00000003437) #24	AGGF1 (ENSOGAG00000003439) #25	ZBED3 (ENSOGAG00000033172) #26	PDE8B (ENSOGAG00000006930) #27	WDR41 (ENSOGAG00000006937) #28	OTP (ENSOGAG00000010197) #29	TBCA (ENSOGAG00000010198) #30	ENSOGAG00000026363	AP3B1 (ENSOGAG00000002145) #31	SCAMP1 (ENSOGAG00000014059) #33	LHFPL2 (ENSOGAG00000024907) #34	ARSB (ENSOGAG00000008620) #36	DMGDH (ENSOGAG00000008622) #37
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00390000018706.m.b.a.j ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cebidae	ANCESTRAL SPECIES	6	ENSGT00390000018706.m.b.a.j ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00390000018706.m.b.a.j ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000153335.a.b.w.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000015047.d.a	ENSGT00950000182940.b.b #18	ENSGT00940000174521	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00510000047029.z.e	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.i.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Capuchin	MODERN SPECIES	50	FAM169A (ENSCCAG00000008188) #9	ENSCCAG00000018354	ENSCCAG00000030843	GCNT4 (ENSCCAG00000012660) #10	ANKRD31 (ENSCCAG00000025762) #11	ENSCCAG00000024833	HMGCR (ENSCCAG00000023164) #12	CERT1 (ENSCCAG00000021594) #13	POLK (ENSCCAG00000029021) #14	ANKDD1B (ENSCCAG00000020279) #15	POC5 (ENSCCAG00000013495) #16	ENSCCAG00000030179	SV2C (ENSCCAG00000036246) #18	IQGAP2 (ENSCCAG00000032875) #20	F2RL2 (ENSCCAG00000023100) #19	F2R (ENSCCAG00000035401) #21	F2RL1 (ENSCCAG00000020451) #22	S100Z (ENSCCAG00000021575) #23	ENSCCAG00000027406	CRHBP (ENSCCAG00000017626) #24	AGGF1 (ENSCCAG00000023174) #25	PDE8B (ENSCCAG00000035315) #27	ENSCCAG00000024360 #28	ENSCCAG00000033428	OTP (ENSCCAG00000028580) #29	TBCA (ENSCCAG00000034960) #30	ENSCCAG00000036687	AP3B1 (ENSCCAG00000024221) #31	ENSCCAG00000001996	SCAMP1 (ENSCCAG00000020394) #33	LHFPL2 (ENSCCAG00000034151) #34
Bolivian squirrel monkey	MODERN SPECIES	43	NSA2 (ENSSBOG00000032829) ##7	FAM169A (ENSSBOG00000033264) #9	GCNT4 (ENSSBOG00000018505) #10	ANKRD31 (ENSSBOG00000030519) #11	ENSSBOG00000030051	HMGCR (ENSSBOG00000028283) #12	CERT1 (ENSSBOG00000027229) #13	POLK (ENSSBOG00000034732) #14	ANKDD1B (ENSSBOG00000027462) #15	POC5 (ENSSBOG00000034084) #16	ENSSBOG00000028612	SV2C (ENSSBOG00000034394) #18	ENSSBOG00000032555	F2RL2 (ENSSBOG00000026294) #19	IQGAP2 (ENSSBOG00000020078) #20	F2R (ENSSBOG00000033584) #21	ENSSBOG00000027642	F2RL1 (ENSSBOG00000028683) #22	S100Z (ENSSBOG00000016013) #23	ENSSBOG00000013156	CRHBP (ENSSBOG00000024077) #24	AGGF1 (ENSSBOG00000019539) #25	ENSSBOG00000032840	PDE8B (ENSSBOG00000020456) #27	WDR41 (ENSSBOG00000019142) #28	ENSSBOG00000021924	OTP (ENSSBOG00000035833) #29	TBCA (ENSSBOG00000031001) #30	AP3B1 (ENSSBOG00000029511) #31	ENSSBOG00000034436	SCAMP1 (ENSSBOG00000029488) #33
Marmoset	MODERN SPECIES	11	HEXB (ENSCJAG00000016664)	GFM2 (ENSCJAG00000016802)	NSA2 (ENSCJAG00000016874) ##7	FAM169A (ENSCJAG00000016884) #9	GCNT4 (ENSCJAG00000016941) #10	ANKRD31 (ENSCJAG00000016943) #11	HMGCR (ENSCJAG00000016954) #12	CERT1 (ENSCJAG00000017020) #13	POLK (ENSCJAG00000017052) #14	ANKDD1B (ENSCJAG00000017129) #15	ENSCJAG00000071025	POC5 (ENSCJAG00000017148) #16	SV2C (ENSCJAG00000020031) #18	F2RL2 (ENSCJAG00000020029) #19	IQGAP2 (ENSCJAG00000019985) #20	F2R (ENSCJAG00000086495) #21	ENSCJAG00000084566	F2RL1 (ENSCJAG00000062182) #22	S100Z (ENSCJAG00000081437) #23	CRHBP (ENSCJAG00000019970) #24	ENSCJAG00000070903	AGGF1 (ENSCJAG00000019955) #25	ZBED3 (ENSCJAG00000019950) #26	PDE8B (ENSCJAG00000019876) #27	WDR41 (ENSCJAG00000019853) #28	OTP (ENSCJAG00000071567) #29	ENSCJAG00000085518	ENSCJAG00000072122	ENSCJAG00000019848 #30	ENSCJAG00000071117	ENSCJAG00000085539
Mas night monkey	MODERN SPECIES	670	HEXB (ENSANAG00000022254)	GFM2 (ENSANAG00000027737)	ENSANAG00000022225 ##7	FAM169A (ENSANAG00000030731) #9	GCNT4 (ENSANAG00000019837) #10	ANKRD31 (ENSANAG00000022634) #11	ENSANAG00000019757	HMGCR (ENSANAG00000030341) #12	CERT1 (ENSANAG00000035049) #13	POLK (ENSANAG00000033747) #14	POC5 (ENSANAG00000033971) #16	SV2C (ENSANAG00000020779) #18	ENSANAG00000023009	IQGAP2 (ENSANAG00000027336) #20	F2RL2 (ENSANAG00000019493) #19	F2R (ENSANAG00000020328) #21	F2RL1 (ENSANAG00000021399) #22	S100Z (ENSANAG00000027821) #23	ENSANAG00000028007	CRHBP (ENSANAG00000022343) #24	AGGF1 (ENSANAG00000023021) #25	PDE8B (ENSANAG00000031594) #27	WDR41 (ENSANAG00000004152) #28	OTP (ENSANAG00000029433) #29	ENSANAG00000035527 #30	AP3B1 (ENSANAG00000035703) #31	ENSANAG00000036326	SCAMP1 (ENSANAG00000023081) #33	LHFPL2 (ENSANAG00000021404) #34	ARSB (ENSANAG00000028965) #36	ENSANAG00000019436
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Hominidae	ANCESTRAL SPECIES	7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Gorilla	MODERN SPECIES	8	ENSGGOG00000041097	ENSGGOG00000023345	GCNT4 (ENSGGOG00000027775) #10	ANKRD31 (ENSGGOG00000017052) #11	HMGCR (ENSGGOG00000010919) #12	CERT1 (ENSGGOG00000005049) #13	POLK (ENSGGOG00000015644) #14	ENSGGOG00000015099 #15	POC5 (ENSGGOG00000015106) #16	ENSGGOG00000039885	ENSGGOG00000042268	ENSGGOG00000039209	SV2C (ENSGGOG00000007723) #18	F2RL2 (ENSGGOG00000011789) #19	IQGAP2 (ENSGGOG00000014696) #20	F2R (ENSGGOG00000010442) #21	F2RL1 (ENSGGOG00000007078) #22	S100Z (ENSGGOG00000025895) #23	CRHBP (ENSGGOG00000011139) #24	AGGF1 (ENSGGOG00000010269) #25	ZBED3 (ENSGGOG00000002896) #26	ENSGGOG00000037102	ENSGGOG00000039702	PDE8B (ENSGGOG00000005317) #27	WDR41 (ENSGGOG00000026798) #28	ENSGGOG00000027406	OTP (ENSGGOG00000015687) #29	ENSGGOG00000023547 #30	ENSGGOG00000027597	AP3B1 (ENSGGOG00000001771) #31	SCAMP1 (ENSGGOG00000015191) #33
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.b.a ##7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Pan	ANCESTRAL SPECIES	21	ENSGT00390000018706.m.b.a ##7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00950000182878.b.a.c.a.a.b.i.b	ENSGT00940000159952 #29	ENSGT00390000009710.p.b #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34
Chimpanzee	MODERN SPECIES	18	FAM169A (ENSPTRG00000016991) #9	ENSPTRG00000044567	GCNT4 (ENSPTRG00000040943) #10	ANKRD31 (ENSPTRG00000016993) #11	HMGCR (ENSPTRG00000016994) #12	CERT1 (ENSPTRG00000016996) #13	POLK (ENSPTRG00000016997) #14	ANKDD1B (ENSPTRG00000016998) #15	POC5 (ENSPTRG00000016999) #16	ENSPTRG00000051331	ENSPTRG00000044990	SV2C (ENSPTRG00000017000) #18	ENSPTRG00000046035	F2RL2 (ENSPTRG00000017003) #19	IQGAP2 (ENSPTRG00000017002) #20	F2R (ENSPTRG00000017004) #21	F2RL1 (ENSPTRG00000017005) #22	S100Z (ENSPTRG00000017006) #23	CRHBP (ENSPTRG00000017007) #24	AGGF1 (ENSPTRG00000017008) #25	ZBED3 (ENSPTRG00000050050) #26	ENSPTRG00000046179	ENSPTRG00000042930	PDE8B (ENSPTRG00000017010) #27	WDR41 (ENSPTRG00000017011) #28	ENSPTRG00000023613	OTP (ENSPTRG00000017012) #29	TBCA (ENSPTRG00000017013) #30	AP3B1 (ENSPTRG00000017015) #31	SCAMP1 (ENSPTRG00000047664) #33	LHFPL2 (ENSPTRG00000045309) #34
Bonobo	MODERN SPECIES	18	ENSPPAG00000040994	FAM169A (ENSPPAG00000042903) #9	ENSPPAG00000041224	ENSPPAG00000035800	ANKRD31 (ENSPPAG00000033501) #11	HMGCR (ENSPPAG00000034707) #12	CERT1 (ENSPPAG00000042589) #13	POLK (ENSPPAG00000026238) #14	ANKDD1B (ENSPPAG00000039465) #15	POC5 (ENSPPAG00000037734) #16	ENSPPAG00000035826	ENSPPAG00000038410	SV2C (ENSPPAG00000042256) #18	F2RL2 (ENSPPAG00000036549) #19	IQGAP2 (ENSPPAG00000029477) #20	F2R (ENSPPAG00000034950) #21	F2RL1 (ENSPPAG00000023823) #22	S100Z (ENSPPAG00000038063) #23	CRHBP (ENSPPAG00000041280) #24	AGGF1 (ENSPPAG00000035969) #25	ENSPPAG00000015926	ENSPPAG00000042326	PDE8B (ENSPPAG00000037153) #27	ENSPPAG00000035224	WDR41 (ENSPPAG00000036126) #28	OTP (ENSPPAG00000042915) #29	TBCA (ENSPPAG00000037014) #30	ENSPPAG00000044127	AP3B1 (ENSPPAG00000038854) #31	SCAMP1 (ENSPPAG00000037862) #33	LHFPL2 (ENSPPAG00000036923) #34
Human	MODERN SPECIES	17	ENC1 (ENSG00000171617)	HEXB (ENSG00000049860)	GFM2 (ENSG00000164347)	NSA2 (ENSG00000164346) ##7	FAM169A (ENSG00000198780) #9	GCNT4 (ENSG00000176928) #10	ANKRD31 (ENSG00000145700) #11	HMGCR (ENSG00000113161) #12	CERT1 (ENSG00000113163) #13	POLK (ENSG00000122008) #14	ANKDD1B (ENSG00000189045) #15	POC5 (ENSG00000152359) #16	SV2C (ENSG00000122012) #18	IQGAP2 (ENSG00000145703) #20	F2RL2 (ENSG00000164220) #19	F2R (ENSG00000181104) #21	F2RL1 (ENSG00000164251) #22	S100Z (ENSG00000171643) #23	CRHBP (ENSG00000145708) #24	AGGF1 (ENSG00000164252) #25	ZBED3 (ENSG00000132846) #26	ENSG00000284762	PDE8B (ENSG00000113231) #27	WDR41 (ENSG00000164253) #28	OTP (ENSG00000171540) #29	TBCA (ENSG00000171530) #30	AP3B1 (ENSG00000132842) #31	SCAMP1 (ENSG00000085365) #33	LHFPL2 (ENSG00000145685) #34	ARSB (ENSG00000113273) #36	DMGDH (ENSG00000132837) #37
Orangutan	MODERN SPECIES	18	GFM2 (ENSPPYG00000015556)	NSA2 (ENSPPYG00000025926) ##7	FAM169A (ENSPPYG00000015557) #9	ENSPPYG00000029971	GCNT4 (ENSPPYG00000015558) #10	ANKRD31 (ENSPPYG00000015559) #11	HMGCR (ENSPPYG00000015560) #12	CERT1 (ENSPPYG00000015561) #13	POLK (ENSPPYG00000015562) #14	ANKDD1B (ENSPPYG00000015563) #15	POC5 (ENSPPYG00000015564) #16	ENSPPYG00000015565	SV2C (ENSPPYG00000015566) #18	IQGAP2 (ENSPPYG00000015568) #20	F2RL2 (ENSPPYG00000015569) #19	F2R (ENSPPYG00000015570) #21	F2RL1 (ENSPPYG00000041489) #22	S100Z (ENSPPYG00000015572) #23	CRHBP (ENSPPYG00000015573) #24	AGGF1 (ENSPPYG00000015574) #25	ZBED3 (ENSPPYG00000015575) #26	PDE8B (ENSPPYG00000015576) #27	ENSPPYG00000030861	WDR41 (ENSPPYG00000015577) #28	OTP (ENSPPYG00000015578) #29	TBCA (ENSPPYG00000015579) #30	ENSPPYG00000040806	AP3B1 (ENSPPYG00000015580) #31	SCAMP1 (ENSPPYG00000015581) #33	LHFPL2 (ENSPPYG00000015582) #34	ARSB (ENSPPYG00000015583) #36
Gibbon	MODERN SPECIES	11	THUMPD1 (ENSNLEG00000012369)	ENSNLEG00000012375	ACSM5 (ENSNLEG00000012394)	PDILT (ENSNLEG00000012398)	UMOD (ENSNLEG00000012413)	GP2 (ENSNLEG00000012434)	GPR139 (ENSNLEG00000012460)	GPRC5B (ENSNLEG00000012461)	IQCK (ENSNLEG00000034248)	KNOP1 (ENSNLEG00000012496)	VPS35L (ENSNLEG00000012499)	CCP110 (ENSNLEG00000012522)	GDE1 (ENSNLEG00000012560)	IQGAP2 (ENSNLEG00000012573) #20	F2RL2 (ENSNLEG00000012616) #19	F2R (ENSNLEG00000012619) #21	F2RL1 (ENSNLEG00000012622) #22	ENSNLEG00000031332	S100Z (ENSNLEG00000012623) #23	CRHBP (ENSNLEG00000012627) #24	AGGF1 (ENSNLEG00000026907) #25	PDE8B (ENSNLEG00000012655) #27	ENSNLEG00000028936	WDR41 (ENSNLEG00000012712) #28	OTP (ENSNLEG00000012728) #29	TBCA (ENSNLEG00000012734) #30	ENSNLEG00000012739	AP3B1 (ENSNLEG00000012740) #31	SCAMP1 (ENSNLEG00000029924) #33	LHFPL2 (ENSNLEG00000035509) #34	ENSNLEG00000018637
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000018706.m.b.a ##7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000018706.m.b.a ##7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000018706.m.b.a ##7	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00730000110997.k.b.a	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34
Pig-tailed macaque	MODERN SPECIES	533	ANKRD31 (ENSMNEG00000038747) #11	HMGCR (ENSMNEG00000036782) #12	CERT1 (ENSMNEG00000034301) #13	ENSMNEG00000012143	POLK (ENSMNEG00000016543) #14	ANKDD1B (ENSMNEG00000040050) #15	ENSMNEG00000041053 ##32	POC5 (ENSMNEG00000028970) #16	ENSMNEG00000029783	ENSMNEG00000039274	ENSMNEG00000035234	SV2C (ENSMNEG00000043938) #18	F2RL2 (ENSMNEG00000028529) #19	IQGAP2 (ENSMNEG00000039584) #20	ENSMNEG00000036523	F2R (ENSMNEG00000039945) #21	F2RL1 (ENSMNEG00000038661) #22	CRHBP (ENSMNEG00000039318) #24	AGGF1 (ENSMNEG00000044235) #25	ENSMNEG00000036640	ENSMNEG00000042545	PDE8B (ENSMNEG00000045435) #27	WDR41 (ENSMNEG00000020110) #28	OTP (ENSMNEG00000033198) #29	ENSMNEG00000044207 #30	ENSMNEG00000004983	ENSMNEG00000041744	AP3B1 (ENSMNEG00000043246) #31	SCAMP1 (ENSMNEG00000028211) #33	LHFPL2 (ENSMNEG00000031372) #34	ARSB (ENSMNEG00000045377) #36
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00730000110997.k.b.a	ENSGT01050000245467.b.a.b	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00390000009710.k.a #30	ENSGT00940000157603 #31	ENSGT00940000161627.a.a.a.a.a.a.a.b	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34
Rhesus	MODERN SPECIES	16	GFM2 (ENSMMUG00000019998)	NSA2 (ENSMMUG00000011196) ##7	FAM169A (ENSMMUG00000011198) #9	ANKRD31 (ENSMMUG00000011061) #11	GCNT4 (ENSMMUG00000043533) #10	ENSMMUG00000054777	HMGCR (ENSMMUG00000006139) #12	CERT1 (ENSMMUG00000006141) #13	POLK (ENSMMUG00000006144) #14	ANKDD1B (ENSMMUG00000061069) #15	POC5 (ENSMMUG00000006146) #16	SV2C (ENSMMUG00000019887) #18	ENSMMUG00000049361	IQGAP2 (ENSMMUG00000022982) #20	F2RL2 (ENSMMUG00000022988) #19	F2R (ENSMMUG00000039522) #21	F2RL1 (ENSMMUG00000060389) #22	ENSMMUG00000050110	CRHBP (ENSMMUG00000021354) #24	AGGF1 (ENSMMUG00000021358) #27	ZBED3 (ENSMMUG00000021357) #26	WDR41 (ENSMMUG00000021361) #28	OTP (ENSMMUG00000039760) #29	ENSMMUG00000053817 #30	AP3B1 (ENSMMUG00000001360) #31	ENSMMUG00000057268	SCAMP1 (ENSMMUG00000039925) #33	LHFPL2 (ENSMMUG00000016402) #34	ARSB (ENSMMUG00000006792) #36	DMGDH (ENSMMUG00000006795) #37	BHMT2 (ENSMMUG00000006796)
Crab-eating macaque	MODERN SPECIES	16	HEXB (ENSMFAG00000003959)	GFM2 (ENSMFAG00000039713)	NSA2 (ENSMFAG00000038283) ##7	FAM169A (ENSMFAG00000001548) #9	GCNT4 (ENSMFAG00000005546) #10	ANKRD31 (ENSMFAG00000044070) #11	HMGCR (ENSMFAG00000036118) #12	CERT1 (ENSMFAG00000030820) #13	POLK (ENSMFAG00000043179) #14	SV2C (ENSMFAG00000036123) #18	ENSMFAG00000000588	ENSMFAG00000048479	IQGAP2 (ENSMFAG00000032362) #20	ENSMFAG00000059937	F2RL2 (ENSMFAG00000045908) #19	F2R (ENSMFAG00000044734) #21	F2RL1 (ENSMFAG00000037697) #22	CRHBP (ENSMFAG00000041775) #24	AGGF1 (ENSMFAG00000038062) #25	ZBED3 (ENSMFAG00000065084) #26	ENSMFAG00000063877	PDE8B (ENSMFAG00000041903) #27	ENSMFAG00000040282	WDR41 (ENSMFAG00000002206) #28	OTP (ENSMFAG00000056050) #29	TBCA (ENSMFAG00000034059) #30	ENSMFAG00000057074	AP3B1 (ENSMFAG00000040032) #31	ENSMFAG00000056484	SCAMP1 (ENSMFAG00000037897) #33	LHFPL2 (ENSMFAG00000036894) #34
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT00390000005534.b.b.c.a	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00390000004454 #16	ENSGT00940000165612	ENSGT00940000164545	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.l #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Sooty mangabey	MODERN SPECIES	296	HMGCR (ENSCATG00000014646) #12	CERT1 (ENSCATG00000037646) #13	ENSCATG00000019819	POLK (ENSCATG00000014199) #14	ANKDD1B (ENSCATG00000040088) #15	ENSCATG00000039793 ##32	POC5 (ENSCATG00000044188) #16	ENSCATG00000033028	ENSCATG00000038048	ENSCATG00000004582	ENSCATG00000039111	SV2C (ENSCATG00000036443) #18	F2RL2 (ENSCATG00000035572) #19	IQGAP2 (ENSCATG00000029179) #20	ENSCATG00000044545	F2R (ENSCATG00000004708) #21	F2RL1 (ENSCATG00000032504) #22	CRHBP (ENSCATG00000033058) #24	AGGF1 (ENSCATG00000041518) #25	ENSCATG00000030461	PDE8B (ENSCATG00000037786) #27	WDR41 (ENSCATG00000041825) #28	OTP (ENSCATG00000032638) #29	ENSCATG00000034024 #30	ENSCATG00000017219	AP3B1 (ENSCATG00000038017) #31	SCAMP1 (ENSCATG00000044496) #33	LHFPL2 (ENSCATG00000035958) #34	ARSB (ENSCATG00000016836) #36	DMGDH (ENSCATG00000043134) #37	BHMT2 (ENSCATG00000041810)
Drill	MODERN SPECIES	197	HMGCR (ENSMLEG00000030530) #12	CERT1 (ENSMLEG00000042639) #13	ENSMLEG00000006839	POLK (ENSMLEG00000042768) #14	ANKDD1B (ENSMLEG00000029848) #15	ENSMLEG00000031391 ##32	POC5 (ENSMLEG00000039781) #16	ENSMLEG00000039763	ENSMLEG00000040235	SV2C (ENSMLEG00000000294) #18	ENSMLEG00000040224	F2RL2 (ENSMLEG00000021660) #19	IQGAP2 (ENSMLEG00000027862) #20	ENSMLEG00000019477	ENSMLEG00000032992	F2R (ENSMLEG00000034077) #21	F2RL1 (ENSMLEG00000032188) #22	CRHBP (ENSMLEG00000033854) #24	AGGF1 (ENSMLEG00000031926) #25	ENSMLEG00000040040	PDE8B (ENSMLEG00000040085) #27	WDR41 (ENSMLEG00000039709) #28	OTP (ENSMLEG00000035311) #29	TBCA (ENSMLEG00000021010) #30	ENSMLEG00000025761	AP3B1 (ENSMLEG00000031960) #31
Olive baboon	MODERN SPECIES	15	ENSPANG00000003862 #11	HMGCR (ENSPANG00000001531) #12	CERT1 (ENSPANG00000000059) #13	POLK (ENSPANG00000000060) #14	ENSPANG00000038550	ANKDD1B (ENSPANG00000009551) #15	POC5 (ENSPANG00000013599) #16	ENSPANG00000046931	ENSPANG00000044389	SV2C (ENSPANG00000014041) #18	ENSPANG00000044335	ENSPANG00000018228	IQGAP2 (ENSPANG00000004269) #20	ENSPANG00000037698	F2RL2 (ENSPANG00000011810) #19	F2R (ENSPANG00000013598) #21	ENSPANG00000037268	F2RL1 (ENSPANG00000003861) #22	CRHBP (ENSPANG00000010788) #24	AGGF1 (ENSPANG00000026423) #25	ZBED3 (ENSPANG00000038596) #26	PDE8B (ENSPANG00000025090) #27	WDR41 (ENSPANG00000011629) #28	OTP (ENSPANG00000009550) #29	TBCA (ENSPANG00000021931) #30	AP3B1 (ENSPANG00000023495) #31	ENSPANG00000050549	SCAMP1 (ENSPANG00000004375) #33	LHFPL2 (ENSPANG00000006610) #34	ARSB (ENSPANG00000023320) #36	DMGDH (ENSPANG00000016060) #37
Vervet Monkey	MODERN SPECIES	23	ARHGEF28 (ENSCSAG00000015492)	ENC1 (ENSCSAG00000019415)	HEXB (ENSCSAG00000015476)	GFM2 (ENSCSAG00000015464)	ENSCSAG00000015450 ##7	FAM169A (ENSCSAG00000015436) #9	GCNT4 (ENSCSAG00000019416) #10	ENSCSAG00000015425 #11	HMGCR (ENSCSAG00000015420) #12	CERT1 (ENSCSAG00000015407) #13	POLK (ENSCSAG00000015397) #14	POC5 (ENSCSAG00000015388) #16	SV2C (ENSCSAG00000015376) #18	IQGAP2 (ENSCSAG00000015367) #20	F2RL2 (ENSCSAG00000015353) #19	F2R (ENSCSAG00000015345) #21	F2RL1 (ENSCSAG00000015342) #22	CRHBP (ENSCSAG00000015337) #24	ENSCSAG00000015331	AGGF1 (ENSCSAG00000015324) #25	ZBED3 (ENSCSAG00000019417) #26	PDE8B (ENSCSAG00000015317) #27	WDR41 (ENSCSAG00000015310) #28	OTP (ENSCSAG00000015302) #29	ENSCSAG00000015299	AP3B1 (ENSCSAG00000015290) #31	SCAMP1 (ENSCSAG00000015275) #33	ENSCSAG00000019418	LHFPL2 (ENSCSAG00000015267) #34	ARSB (ENSCSAG00000015262) #36	DMGDH (ENSCSAG00000015255) #37
Rhinopithecus	ANCESTRAL SPECIES	435							ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154690.ub.a	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000246082	ENSGT01050000244840.A.a.a #22
Golden snub-nosed monkey	MODERN SPECIES	2770						HMGCR (ENSRROG00000039933) #12	CERT1 (ENSRROG00000029719) #13	POLK (ENSRROG00000037966) #14	ANKDD1B (ENSRROG00000040202) #15	POC5 (ENSRROG00000042318) #16	ENSRROG00000030072	ENSRROG00000040882	SV2C (ENSRROG00000013475) #18	F2RL2 (ENSRROG00000038200) #19	IQGAP2 (ENSRROG00000034599) #20	F2R (ENSRROG00000036126) #21	ENSRROG00000037429	F2RL1 (ENSRROG00000032623) #22
Black snub-nosed monkey	MODERN SPECIES	1407						HMGCR (ENSRBIG00000037269) #12	CERT1 (ENSRBIG00000043633) #13	POLK (ENSRBIG00000037378) #14	ANKDD1B (ENSRBIG00000041604) #15	POC5 (ENSRBIG00000041501) #16	ENSRBIG00000028878	SV2C (ENSRBIG00000040092) #18	ENSRBIG00000036353	IQGAP2 (ENSRBIG00000034318) #20	F2RL2 (ENSRBIG00000019692) #19	F2R (ENSRBIG00000036891) #21	ENSRBIG00000042617	F2RL1 (ENSRBIG00000037566) #22	ENSRBIG00000029722	ENSRBIG00000017660
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Tree shrew	MODERN SPECIES	947													SV2C (ENSTBEG00000010889) #18	IQGAP2 (ENSTBEG00000010997) #20	F2RL2 (ENSTBEG00000011506) #19	F2R (ENSTBEG00000011565) #21	F2RL1 (ENSTBEG00000011751) #22
Glires	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Lagomorpha	ANCESTRAL SPECIES	211						ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Rabbit	MODERN SPECIES	588											ENSOCUG00000002900 #14	ANKDD1B (ENSOCUG00000002937) #15	POC5 (ENSOCUG00000002940) #16	SV2C (ENSOCUG00000024422) #18	IQGAP2 (ENSOCUG00000003397) #20	F2R (ENSOCUG00000022794) #21	F2RL1 (ENSOCUG00000002582) #22	ENSOCUG00000023729 #23	CRHBP (ENSOCUG00000010027) #24
Pika	MODERN SPECIES	10074																F2R (ENSOPRG00000009364) #21	F2RL1 (ENSOPRG00000009367) #22	S100Z (ENSOPRG00000009376) #23
Rodentia	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Muroidea	ANCESTRAL SPECIES	4	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001012819 ##7	Fam169a (ENSCGRG00001021297) #9	Gcnt4 (ENSCGRG00001008293) #10	ENSCGRG00001008489	ENSCGRG00001014554	Ankrd31 (ENSCGRG00001018162) #11	HMGCR (ENSCGRG00001016870) #12	Cert1 (ENSCGRG00001020451) #13	Polk (ENSCGRG00001013007) #14	ENSCGRG00001012277	Ankdd1b (ENSCGRG00001016471) #15	Poc5 (ENSCGRG00001015817) #16	Sv2c (ENSCGRG00001015770) #18	F2rl2 (ENSCGRG00001014616) #19	Iqgap2 (ENSCGRG00001019858) #20	F2r (ENSCGRG00001016531) #21	F2rl1 (ENSCGRG00001012796) #22	S100z (ENSCGRG00001009971) #23	Crhbp (ENSCGRG00001008314) #24	Aggf1 (ENSCGRG00001017039) #25	Zbed3 (ENSCGRG00001010271) #26	Pde8b (ENSCGRG00001015606) #27	Wdr41 (ENSCGRG00001008129) #28	ENSCGRG00001008932	Otp (ENSCGRG00001022392) #29	Tbca (ENSCGRG00001021971) #30	Ap3b1 (ENSCGRG00001009397) #31	Scamp1 (ENSCGRG00001004428) #33	Lhfpl2 (ENSCGRG00001003627) #34	Arsb (ENSCGRG00001015736) #36	Dmgdh (ENSCGRG00001014647) #37
Golden Hamster	MODERN SPECIES	620	Enc1 (ENSMAUG00000004740)	Hexb (ENSMAUG00000014888)	Gfm2 (ENSMAUG00000022103)	Nsa2 (ENSMAUG00000002302) ##7	Fam169a (ENSMAUG00000009954) #9	Gcnt4 (ENSMAUG00000017229) #10	Ankrd31 (ENSMAUG00000020142) #11	Hmgcr (ENSMAUG00000012278) #12	Cert1 (ENSMAUG00000019472) #13	Polk (ENSMAUG00000016560) #14	Ankdd1b (ENSMAUG00000018964) #15	Poc5 (ENSMAUG00000003174) #16	Sv2c (ENSMAUG00000005414) #18	Iqgap2 (ENSMAUG00000022130) #20	F2rl2 (ENSMAUG00000015710) #19	F2r (ENSMAUG00000010556) #21	F2rl1 (ENSMAUG00000012126) #22	S100z (ENSMAUG00000001531) #23	Crhbp (ENSMAUG00000010702) #24	Aggf1 (ENSMAUG00000012678) #25	Pde8b (ENSMAUG00000015472) #27	Wdr41 (ENSMAUG00000004461) #28	Otp (ENSMAUG00000007760) #29	Tbca (ENSMAUG00000018233) #30	Ap3b1 (ENSMAUG00000001490) #31	Scamp1 (ENSMAUG00000018961) #33	Lhfpl2 (ENSMAUG00000020241) #34	Arsb (ENSMAUG00000005115) #36	Dmgdh (ENSMAUG00000011337) #37	Bhmt2 (ENSMAUG00000008057)	ENSMAUG00000004226
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Prairie vole	MODERN SPECIES	6	ENSMOCG00000004402	ENSMOCG00000012395 ##7	Fam169a (ENSMOCG00000014172) #9	Gcnt4 (ENSMOCG00000017465) #10	Ankrd31 (ENSMOCG00000009502) #11	ENSMOCG00000019171	Hmgcr (ENSMOCG00000008012) #12	ENSMOCG00000019480 #13	Polk (ENSMOCG00000016143) #14	ENSMOCG00000014817	Ankdd1b (ENSMOCG00000003243) #15	Poc5 (ENSMOCG00000009038) #16	Sv2c (ENSMOCG00000021524) #18	Iqgap2 (ENSMOCG00000002734) #20	F2rl2 (ENSMOCG00000008663) #19	F2r (ENSMOCG00000012362) #21	F2rl1 (ENSMOCG00000013582) #22	S100z (ENSMOCG00000020194) #23	Crhbp (ENSMOCG00000021245) #24	ENSMOCG00000001987	Aggf1 (ENSMOCG00000003377) #25	Zbed3 (ENSMOCG00000011692) #26	Pde8b (ENSMOCG00000012277) #27	Wdr41 (ENSMOCG00000006320) #28	ENSMOCG00000006214	Otp (ENSMOCG00000019228) #29	Tbca (ENSMOCG00000005814) #30	ENSMOCG00000006493	ENSMOCG00000005321	Ap3b1 (ENSMOCG00000017264) #31	Scamp1 (ENSMOCG00000001373) #33
Northern American deer mouse	MODERN SPECIES	6	Hexb (ENSPEMG00000005317)	Gfm2 (ENSPEMG00000000622)	Nsa2 (ENSPEMG00000015289) ##7	Fam169a (ENSPEMG00000010978) #9	Gcnt4 (ENSPEMG00000018132) #10	Ankrd31 (ENSPEMG00000018561) #11	Hmgcr (ENSPEMG00000016961) #12	Cert1 (ENSPEMG00000010777) #13	ENSPEMG00000017070	Polk (ENSPEMG00000019237) #14	Ankdd1b (ENSPEMG00000005192) #15	Poc5 (ENSPEMG00000008614) #16	Sv2c (ENSPEMG00000013942) #18	F2rl2 (ENSPEMG00000019142) #19	Iqgap2 (ENSPEMG00000013395) #20	F2r (ENSPEMG00000025363) #21	F2rl1 (ENSPEMG00000029040) #22	S100z (ENSPEMG00000013966) #23	Crhbp (ENSPEMG00000009836) #24	Aggf1 (ENSPEMG00000015659) #25	Pde8b (ENSPEMG00000020359) #27	ENSPEMG00000023412 #28	Tbca (ENSPEMG00000015419) #30	Ap3b1 (ENSPEMG00000021014) #31	Scamp1 (ENSPEMG00000029280) #33	Lhfpl2 (ENSPEMG00000029932) #34	Arsb (ENSPEMG00000020554) #36	Dmgdh (ENSPEMG00000021307) #37	Bhmt2 (ENSPEMG00000021198)	ENSPEMG00000020841	ENSPEMG00000030474
Murinae	ANCESTRAL SPECIES	24	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Mus	ANCESTRAL SPECIES	22	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Mus_A	ANCESTRAL SPECIES	14	ENSGT00550000074890	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00860000136215	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00900000143364	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
spretus	MODERN SPECIES	4	Hexb (MGP_SPRETEiJ_G0019697)	Gfm2 (MGP_SPRETEiJ_G0019696)	MGP_SPRETEiJ_G0019695 #7	Fam169a (MGP_SPRETEiJ_G0019694) #9	1700029F12Rik (MGP_SPRETEiJ_G0019693)	Gcnt4 (MGP_SPRETEiJ_G0019692) #10	Hmgcr (MGP_SPRETEiJ_G0019691) #12	Cert1 (MGP_SPRETEiJ_G0019690) #13	MGP_SPRETEiJ_G0019689	Polk (MGP_SPRETEiJ_G0019688) #14	Ankdd1b (MGP_SPRETEiJ_G0019687) #15	Poc5 (MGP_SPRETEiJ_G0019686) #16	Sv2c (MGP_SPRETEiJ_G0019685) #18	F2rl2 (MGP_SPRETEiJ_G0019684) #19	Iqgap2 (MGP_SPRETEiJ_G0019683) #20	F2r (MGP_SPRETEiJ_G0019682) #21	F2rl1 (MGP_SPRETEiJ_G0019681) #22	S100z (MGP_SPRETEiJ_G0019680) #23	Crhbp (MGP_SPRETEiJ_G0019679) #24	Aggf1 (MGP_SPRETEiJ_G0019678) #25	Zbed3 (MGP_SPRETEiJ_G0019677) #26	Pde8b (MGP_SPRETEiJ_G0019676) #27	MGP_SPRETEiJ_G0019675 #28	Otp (MGP_SPRETEiJ_G0019674) #29	Tbca (MGP_SPRETEiJ_G0019673) #30	Ap3b1 (MGP_SPRETEiJ_G0019672) #31	MGP_SPRETEiJ_G0019671	Scamp1 (MGP_SPRETEiJ_G0019670) #33	Lhfpl2 (MGP_SPRETEiJ_G0019669) #34	Arsb (MGP_SPRETEiJ_G0019668) #36	Dmgdh (MGP_SPRETEiJ_G0019667) #37
Steppe mouse	MODERN SPECIES	3412														Iqgap2 (ENSMSIG00000011044) #20	F2rl2 (ENSMSIG00000011060) #19	F2r (ENSMSIG00000011072) #21	F2rl1 (ENSMSIG00000011086) #22	S100z (ENSMSIG00000011096) #23	Crhbp (ENSMSIG00000011120) #24	Aggf1 (ENSMSIG00000011146) #25	ENSMSIG00000011178 #26	Pde8b (ENSMSIG00000011209) #27	ENSMSIG00000011421 #28	Otp (ENSMSIG00000011481) #29	ENSMSIG00000011491 #30	Ap3b1 (ENSMSIG00000011521) #31	Scamp1 (ENSMSIG00000011596) #33	Lhfpl2 (ENSMSIG00000011618) #34	Arsb (ENSMSIG00000011652) #36	Dmgdh (ENSMSIG00000011670) #37	Bhmt2 (ENSMSIG00000011736)
Mouse	MODERN SPECIES	4	Nsa2 (ENSMUSG00000060739) ##7	Gm6169 (ENSMUSG00000057762)	Fam169a (ENSMUSG00000041817) #9	1700029F12Rik (ENSMUSG00000052075)	Gcnt4 (ENSMUSG00000091387) #10	Ankrd31 (ENSMUSG00000109561) #11	Hmgcr (ENSMUSG00000021670) #12	Cert1 (ENSMUSG00000021669) #13	Polk (ENSMUSG00000021668) #14	Ankdd1b (ENSMUSG00000047117) #15	Poc5 (ENSMUSG00000021671) #16	Btf3l4b (ENSMUSG00000114133)	Sv2c (ENSMUSG00000051111) #18	F2rl2 (ENSMUSG00000021675) #19	Iqgap2 (ENSMUSG00000021676) #20	F2r (ENSMUSG00000048376) #21	F2rl1 (ENSMUSG00000021678) #22	S100z (ENSMUSG00000021679) #23	Crhbp (ENSMUSG00000021680) #24	Aggf1 (ENSMUSG00000021681) #25	Zbed3 (ENSMUSG00000041995) #26	Pde8b (ENSMUSG00000021684) #27	Wdr41 (ENSMUSG00000042015) #28	Otp (ENSMUSG00000021685) #29	Tbca (ENSMUSG00000042043) #30	Ap3b1 (ENSMUSG00000021686) #31	Scamp1 (ENSMUSG00000021687) #33	Lhfpl2 (ENSMUSG00000045312) #34	Arsb (ENSMUSG00000042082) #36	Dmgdh (ENSMUSG00000042102) #37	Bhmt2 (ENSMUSG00000042118)
Ryukyu mouse	MODERN SPECIES	4	Gfm2 (MGP_CAROLIEiJ_G0018814)	Nsa2 (MGP_CAROLIEiJ_G0018813) ##7	Fam169a (MGP_CAROLIEiJ_G0018812) #9	1700029F12Rik (MGP_CAROLIEiJ_G0018811)	Gcnt4 (MGP_CAROLIEiJ_G0018810) #10	MGP_CAROLIEiJ_G0018809 #11	Hmgcr (MGP_CAROLIEiJ_G0018808) #12	Cert1 (MGP_CAROLIEiJ_G0018807) #13	MGP_CAROLIEiJ_G0018806	Polk (MGP_CAROLIEiJ_G0018805) #14	Ankdd1b (MGP_CAROLIEiJ_G0018804) #15	Poc5 (MGP_CAROLIEiJ_G0018803) #16	Sv2c (MGP_CAROLIEiJ_G0018802) #18	F2rl2 (MGP_CAROLIEiJ_G0018801) #19	Iqgap2 (MGP_CAROLIEiJ_G0018800) #20	F2r (MGP_CAROLIEiJ_G0018799) #21	F2rl1 (MGP_CAROLIEiJ_G0018798) #22	S100z (MGP_CAROLIEiJ_G0018797) #23	Crhbp (MGP_CAROLIEiJ_G0018796) #24	Aggf1 (MGP_CAROLIEiJ_G0018795) #25	Zbed3 (MGP_CAROLIEiJ_G0018794) #26	Pde8b (MGP_CAROLIEiJ_G0018793) #27	MGP_CAROLIEiJ_G0018792 #28	Otp (MGP_CAROLIEiJ_G0018791) #29	Tbca (MGP_CAROLIEiJ_G0018790) #30	Ap3b1 (MGP_CAROLIEiJ_G0018789) #31	MGP_CAROLIEiJ_G0018788	Scamp1 (MGP_CAROLIEiJ_G0018787) #33	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #34	MGP_CAROLIEiJ_G0018785	Arsb (MGP_CAROLIEiJ_G0018784) #36
Shrew mouse	MODERN SPECIES	2	Enc1 (MGP_PahariEiJ_G0015891)	Hexb (MGP_PahariEiJ_G0015890)	Gfm2 (MGP_PahariEiJ_G0015889)	Nsa2 (MGP_PahariEiJ_G0015888) ##7	Fam169a (MGP_PahariEiJ_G0015887) #9	Gcnt4 (MGP_PahariEiJ_G0015886) #10	Hmgcr (MGP_PahariEiJ_G0015885) #12	Cert1 (MGP_PahariEiJ_G0015884) #13	MGP_PahariEiJ_G0015883	Polk (MGP_PahariEiJ_G0015882) #14	Ankdd1b (MGP_PahariEiJ_G0015881) #15	Poc5 (MGP_PahariEiJ_G0015880) #16	Sv2c (MGP_PahariEiJ_G0015879) #18	F2rl2 (MGP_PahariEiJ_G0015878) #19	Iqgap2 (MGP_PahariEiJ_G0015877) #20	F2r (MGP_PahariEiJ_G0015876) #21	F2rl1 (MGP_PahariEiJ_G0015875) #22	S100z (MGP_PahariEiJ_G0015874) #23	Crhbp (MGP_PahariEiJ_G0015873) #24	Aggf1 (MGP_PahariEiJ_G0015872) #25	Zbed3 (MGP_PahariEiJ_G0015871) #26	Pde8b (MGP_PahariEiJ_G0015870) #27	MGP_PahariEiJ_G0015869 #28	Otp (MGP_PahariEiJ_G0015868) #29	Tbca (MGP_PahariEiJ_G0015867) #30	Ap3b1 (MGP_PahariEiJ_G0015866) #31	MGP_PahariEiJ_G0015865	Scamp1 (MGP_PahariEiJ_G0015864) #33	Lhfpl2 (MGP_PahariEiJ_G0015863) #34	Arsb (MGP_PahariEiJ_G0015862) #36	Dmgdh (MGP_PahariEiJ_G0015861) #37
Rat	MODERN SPECIES	11	Gfm2 (ENSRNOG00000025285)	Nsa2 (ENSRNOG00000016530) ##7	Fam169a (ENSRNOG00000016505) #9	Gcnt4 (ENSRNOG00000064612) #10	Ankrd31 (ENSRNOG00000025321) #11	Hmgcr (ENSRNOG00000016122) #12	Cert1 (ENSRNOG00000015686) #13	ENSRNOG00000067644	Polk (ENSRNOG00000060626) #14	Ankdd1b (ENSRNOG00000025377) #15	Poc5 (ENSRNOG00000018193) #16	AABR07007744.2 (ENSRNOG00000060714)	Sv2c (ENSRNOG00000018094) #18	F2rl2 (ENSRNOG00000018054) #19	Iqgap2 (ENSRNOG00000025406) #20	F2r (ENSRNOG00000048043) #21	AABR07007730.1 (ENSRNOG00000018045)	F2rl1 (ENSRNOG00000018003) #22	S100z (ENSRNOG00000017998) #23	Crhbp (ENSRNOG00000017890) #24	Aggf1 (ENSRNOG00000029304) #25	ENSRNOG00000063007	Zbed3 (ENSRNOG00000028941) #26	LOC100912266 (ENSRNOG00000059441)	ENSRNOG00000067662	Pde8b (ENSRNOG00000010280) #27	Wdr41 (ENSRNOG00000025462) #28	Otp (ENSRNOG00000010560) #29	Tbca (ENSRNOG00000048342) #30	ENSRNOG00000068970	Ap3b1 (ENSRNOG00000010624) #31
Upper Galilee mountains blind mole rat	MODERN SPECIES	1748													Sv2c (ENSNGAG00000014621) #18	F2rl2 (ENSNGAG00000013049) #19	Iqgap2 (ENSNGAG00000005917) #20	F2r (ENSNGAG00000001548) #21	F2rl1 (ENSNGAG00000019243) #22	S100z (ENSNGAG00000014093) #23	Crhbp (ENSNGAG00000013680) #24	Aggf1 (ENSNGAG00000008354) #25	Zbed3 (ENSNGAG00000000806) #26	Pde8b (ENSNGAG00000003750) #27	ENSNGAG00000018792 #28	Otp (ENSNGAG00000016224) #29	Tbca (ENSNGAG00000020367) #30	Ap3b1 (ENSNGAG00000015487) #31	ENSNGAG00000011149
Lesser Egyptian jerboa	MODERN SPECIES	45	Hexb (ENSJJAG00000023858)	Gfm2 (ENSJJAG00000024278)	Nsa2 (ENSJJAG00000017152) ##7	Fam169a (ENSJJAG00000011041) #9	ENSJJAG00000016281	Gcnt4 (ENSJJAG00000010750) #10	ENSJJAG00000010566 #11	Hmgcr (ENSJJAG00000010723) #12	Cert1 (ENSJJAG00000023198) #13	Polk (ENSJJAG00000004931) #14	Ankdd1b (ENSJJAG00000013237) #15	Poc5 (ENSJJAG00000019666) #16	Sv2c (ENSJJAG00000012121) #18	F2rl2 (ENSJJAG00000020545) #19	Iqgap2 (ENSJJAG00000023927) #20	F2r (ENSJJAG00000021467) #21	F2rl1 (ENSJJAG00000005361) #22	ENSJJAG00000018088	S100z (ENSJJAG00000013195) #23	Crhbp (ENSJJAG00000010630) #24	Prrc1 (ENSJJAG00000011454)	Ctxn3 (ENSJJAG00000011014)	ENSJJAG00000017426	Slc12a2 (ENSJJAG00000019580)	Fbn2 (ENSJJAG00000020592)	ENSJJAG00000017710	Slc27a6 (ENSJJAG00000020519)	Isoc1 (ENSJJAG00000019157)	Adamts19 (ENSJJAG00000021431)	Minar2 (ENSJJAG00000000279)	Frmd4b (ENSJJAG00000023390)
Kangaroo rat	MODERN SPECIES	402	ENSDORG00000016229	Gfm2 (ENSDORG00000016231)	ENSDORG00000030249	Nsa2 (ENSDORG00000012640) ##7	Fam169a (ENSDORG00000012641) #9	Gcnt4 (ENSDORG00000015957) #10	Ankrd31 (ENSDORG00000008528) #11	ENSDORG00000005455 #12	Cert1 (ENSDORG00000005457) #13	Polk (ENSDORG00000007761) #14	Ankdd1b (ENSDORG00000007845) #15	Poc5 (ENSDORG00000000829) #16	Sv2c (ENSDORG00000004739) #18	Iqgap2 (ENSDORG00000006829) #20	F2rl2 (ENSDORG00000006832) #19	F2r (ENSDORG00000023264) #21	ENSDORG00000024082	F2rl1 (ENSDORG00000004660) #22	S100z (ENSDORG00000026410) #23	Crhbp (ENSDORG00000002200) #24	Ppwd1 (ENSDORG00000007359)	ENSDORG00000028726	Adamts6 (ENSDORG00000004761)	Cwc27 (ENSDORG00000009898)	ENSDORG00000028891	Srek1ip1 (ENSDORG00000009897)	Shisal2b (ENSDORG00000009896)	Rgs7bp (ENSDORG00000024658)	Nt5el (ENSDORG00000025625)	ENSDORG00000004059	Htr1a (ENSDORG00000026772)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Naked mole-rat female	MODERN SPECIES	7	C10orf71 (ENSHGLG00000020256)	DRGX (ENSHGLG00000033413)	ERCC6 (ENSHGLG00000000923)	SLC18A3 (ENSHGLG00000020633)	CHAT (ENSHGLG00000000867)	ENSHGLG00000002348	OGDHL (ENSHGLG00000001655)	ENSHGLG00000036050	PARG (ENSHGLG00000001430)	ENSHGLG00000001351	ENSHGLG00000002909	ENSHGLG00000000494 #18	ENSHGLG00000001079	F2RL2 (ENSHGLG00000001444) #19	ENSHGLG00000001189 #20	ENSHGLG00000000412 #21	ENSHGLG00000044569	S100Z (ENSHGLG00000047331) #23	ENSHGLG00000001594 #24	ENSHGLG00000001729	AGGF1 (ENSHGLG00000000455) #25	ZBED3 (ENSHGLG00000042521) #26	ENSHGLG00000038975	ENSHGLG00000002178 #27	ENSHGLG00000041303	ENSHGLG00000038347	ENSHGLG00000017808 #28	OTP (ENSHGLG00000003908) #29	ENSHGLG00000000425 #30	ENSHGLG00000019786	AP3B1 (ENSHGLG00000001480) #31
Hystricomorpha_a	ANCESTRAL SPECIES	72	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026.c #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Guinea pig	MODERN SPECIES	29													SV2C (ENSCPOG00000008567) #18	IQGAP2 (ENSCPOG00000025031) #20	F2RL2 (ENSCPOG00000002801) #19	F2R (ENSCPOG00000032667) #21	F2RL1 (ENSCPOG00000033414) #22	S100Z (ENSCPOG00000030952) #23	CRHBP (ENSCPOG00000002422) #24	ENSCPOG00000009626	ENSCPOG00000035041	ELOVL7 (ENSCPOG00000037993)	DEPDC1B (ENSCPOG00000011483)	PDE4D (ENSCPOG00000004873)	ENSCPOG00000039531	RAB3C (ENSCPOG00000001394)	PLK2 (ENSCPOG00000021250)	ACTBL2 (ENSCPOG00000011023)	GPBP1 (ENSCPOG00000012341)	ENSCPOG00000015027	SETD9 (ENSCPOG00000015025)
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Marmotini	ANCESTRAL SPECIES	23	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Alpin marmot	MODERN SPECIES	48	ENSMMMG00000002120	HEXB (ENSMMMG00000002087)	GFM2 (ENSMMMG00000001763)	NSA2 (ENSMMMG00000001722) ##7	FAM169A (ENSMMMG00000001677) #9	GCNT4 (ENSMMMG00000001657) #10	ENSMMMG00000001628 #11	HMGCR (ENSMMMG00000001547) #12	CERT1 (ENSMMMG00000001422) #13	POLK (ENSMMMG00000001203) #14	ANKDD1B (ENSMMMG00000001142) #15	POC5 (ENSMMMG00000000939) #16	SV2C (ENSMMMG00000000845) #18	F2RL2 (ENSMMMG00000000828) #19	IQGAP2 (ENSMMMG00000000750) #20	F2R (ENSMMMG00000000732) #21	F2RL1 (ENSMMMG00000000723) #22	S100Z (ENSMMMG00000000720) #23
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24
Arctic ground squirrel	MODERN SPECIES	299	ENC1 (ENSUPAG00010004981)	HEXB (ENSUPAG00010004984)	GFM2 (ENSUPAG00010005333)	NSA2 (ENSUPAG00010005383) ##7	FAM169A (ENSUPAG00010005409) #9	GCNT4 (ENSUPAG00010005440) #10	ENSUPAG00010005442 #11	HMGCR (ENSUPAG00010005462) #12	ENSUPAG00010005498 #13	POLK (ENSUPAG00010005814) #14	ANKDD1B (ENSUPAG00010005945) #15	POC5 (ENSUPAG00010005963) #16	SV2C (ENSUPAG00010006006) #18	IQGAP2 (ENSUPAG00010006026) #20	F2RL2 (ENSUPAG00010006042) #19	F2R (ENSUPAG00010006053) #21	F2RL1 (ENSUPAG00010006060) #22	S100Z (ENSUPAG00010006063) #23	CRHBP (ENSUPAG00010006069) #24
Squirrel	MODERN SPECIES	149	ENC1 (ENSSTOG00000029074)	ENSSTOG00000027827	HEXB (ENSSTOG00000007903)	GFM2 (ENSSTOG00000007931)	ENSSTOG00000007959 ##7	FAM169A (ENSSTOG00000007975) #9	ANKRD31 (ENSSTOG00000034383) #11	HMGCR (ENSSTOG00000009610) #12	CERT1 (ENSSTOG00000003170) #13	ENSSTOG00000003205 #14	ANKDD1B (ENSSTOG00000009832) #15	POC5 (ENSSTOG00000009839) #16	SV2C (ENSSTOG00000013490) #18	F2RL2 (ENSSTOG00000034743) #19	IQGAP2 (ENSSTOG00000013504) #20	F2R (ENSSTOG00000008252) #21	F2RL1 (ENSSTOG00000026512) #22	S100Z (ENSSTOG00000009498) #23	CRHBP (ENSSTOG00000009510) #24
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005006579	NSA2 (ENSSVLG00005006610) ##7	FAM169A (ENSSVLG00005006669) #9	GCNT4 (ENSSVLG00005006815) #10	ANKRD31 (ENSSVLG00005006845) #11	HMGCR (ENSSVLG00005006942) #12	CERT1 (ENSSVLG00005007093) #13	ENSSVLG00005007250	POLK (ENSSVLG00005007352) #14	ANKDD1B (ENSSVLG00005007433) #15	POC5 (ENSSVLG00005007522) #16	ENSSVLG00005007604	SV2C (ENSSVLG00005007661) #18	IQGAP2 (ENSSVLG00005007881) #20	F2RL2 (ENSSVLG00005008481) #19	F2R (ENSSVLG00005008506) #21	ENSSVLG00005008525 #22	ENSSVLG00005008549	S100Z (ENSSVLG00005008555) #23	CRHBP (ENSSVLG00005008579) #24	ENSSVLG00005008651	ENSSVLG00005008740	OCLN (ENSSVLG00005008798)	MARVELD2 (ENSSVLG00005008937)	RAD17 (ENSSVLG00005009140)	ENSSVLG00005009362	CCDC125 (ENSSVLG00005009466)	CDK7 (ENSSVLG00005009632)	ENSSVLG00005009714	CENPH (ENSSVLG00005009762)	CCNB1 (ENSSVLG00005009823)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01050000244840.A.a.b #21
Common shrew	MODERN SPECIES	5774																F2R (ENSSARG00000013083) #21
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Caniformia	ANCESTRAL SPECIES	5	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Ursidae	ANCESTRAL SPECIES	16	ENSGT00390000008107.c.a.t	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Ursus	ANCESTRAL SPECIES	3	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00950000182901.a.a.b.a.b.b	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Polar bear	MODERN SPECIES	173	GFM2 (ENSUMAG00000007328)	ENSUMAG00000007325 #7	FAM169A (ENSUMAG00000007308) #9	GCNT4 (ENSUMAG00000007290) #10	ENSUMAG00000007284 #11	ENSUMAG00000007271	HMGCR (ENSUMAG00000007258) #12	CERT1 (ENSUMAG00000007238) #13	POLK (ENSUMAG00000007228) #14	ENSUMAG00000007224	ANKDD1B (ENSUMAG00000007210) #15	POC5 (ENSUMAG00000007198) #16	SV2C (ENSUMAG00000007138) #18	F2RL2 (ENSUMAG00000007111) #19	IQGAP2 (ENSUMAG00000005302) #20	F2R (ENSUMAG00000005082) #21	F2RL1 (ENSUMAG00000005075) #22	CRHBP (ENSUMAG00000005059) #24	AGGF1 (ENSUMAG00000005048) #25	ENSUMAG00000005026	PDE8B (ENSUMAG00000004797) #27	WDR41 (ENSUMAG00000004705) #28	ENSUMAG00000004694	AP3B1 (ENSUMAG00000004124) #31
American black bear	MODERN SPECIES	1047														F2RL2 (ENSUAMG00000016688) #19	IQGAP2 (ENSUAMG00000015974) #20	F2R (ENSUAMG00000015915) #21
Giant Panda	MODERN SPECIES	13	HEXB (ENSAMEG00000000487)	GFM2 (ENSAMEG00000000544)	ENSAMEG00000000593 #7	FAM169A (ENSAMEG00000000608) #9	GCNT4 (ENSAMEG00000029130) #10	ENSAMEG00000000627 #11	ENSAMEG00000030480	HMGCR (ENSAMEG00000000634) #12	CERT1 (ENSAMEG00000000701) #13	POLK (ENSAMEG00000000744) #14	ANKDD1B (ENSAMEG00000000782) #15	POC5 (ENSAMEG00000000800) #16	SV2C (ENSAMEG00000000836) #18	IQGAP2 (ENSAMEG00000001638) #20	F2RL2 (ENSAMEG00000001805) #19	F2R (ENSAMEG00000018602) #21	F2RL1 (ENSAMEG00000001809) #22	CRHBP (ENSAMEG00000001817) #24	AGGF1 (ENSAMEG00000001833) #25	PDE8B (ENSAMEG00000005971) #27	ENSAMEG00000028764	WDR41 (ENSAMEG00000005933) #28	OTP (ENSAMEG00000028076) #29	TBCA (ENSAMEG00000027837) #30	AP3B1 (ENSAMEG00000005816) #31	SCAMP1 (ENSAMEG00000005799) #33	LHFPL2 (ENSAMEG00000005794) #34	ARSB (ENSAMEG00000005783) #36	DMGDH (ENSAMEG00000005739) #37	BHMT2 (ENSAMEG00000005719)	BHMT (ENSAMEG00000005696)
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.n ##7	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.g #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000153593.c.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.a
Ferret	MODERN SPECIES	286	HEXB (ENSMPUG00000005816)	ENSMPUG00000005795 #7	FAM169A (ENSMPUG00000005788) #9	GFM2 (ENSMPUG00000005688)	GCNT4 (ENSMPUG00000018801) #10	ENSMPUG00000005681 #11	ENSMPUG00000005678 #11	HMGCR (ENSMPUG00000005662) #12	CERT1 (ENSMPUG00000005653) #13	POLK (ENSMPUG00000005641) #14	ANKDD1B (ENSMPUG00000005630) #15	POC5 (ENSMPUG00000005619) #16	SV2C (ENSMPUG00000005606) #18	F2RL2 (ENSMPUG00000005597) #19	IQGAP2 (ENSMPUG00000005569) #20	F2R (ENSMPUG00000005558) #21	F2RL1 (ENSMPUG00000005551) #22	CRHBP (ENSMPUG00000005538) #24	AGGF1 (ENSMPUG00000005518) #25	PDE8B (ENSMPUG00000005262) #27	WDR41 (ENSMPUG00000005197) #28	ENSMPUG00000018800	OTP (ENSMPUG00000005191) #29	ENSMPUG00000005179	ENSMPUG00000018799	ENSMPUG00000005174	AP3B1 (ENSMPUG00000005160) #31	SCAMP1 (ENSMPUG00000005152) #33	LHFPL2 (ENSMPUG00000005146) #34	ARSB (ENSMPUG00000005100) #36	DMGDH (ENSMPUG00000005093) #37
American mink	MODERN SPECIES	112													SV2C (ENSNVIG00000003066) #18	PAR3 (ENSNVIG00000003032) #19	IQGAP2 (ENSNVIG00000002874) #20	F2R (ENSNVIG00000002863) #21	F2RL1 (ENSNVIG00000002854) #22	CRHBP (ENSNVIG00000002829) #24	AGGF1 (ENSNVIG00000002783) #25	ZBED3 (ENSNVIG00000002773) #26	ENSNVIG00000002723 #27	WDR41 (ENSNVIG00000002651) #28	OTP (ENSNVIG00000002637) #29	TBCA (ENSNVIG00000002606) #30	ENSNVIG00000002585	AP3B1 (ENSNVIG00000002504) #31	SCAMP1 (ENSNVIG00000002476) #33	LHPL2 (ENSNVIG00000002454) #34	ARSB (ENSNVIG00000002402) #36	DMGDH (ENSNVIG00000002369) #37	BHMT (ENSNVIG00000002335)
Canidae	ANCESTRAL SPECIES	52	ENSGT01090000260006.A.c.a.b.b	ENSGT01090000260006.A.c.a.b.a.l	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.b.a	ENSGT01090000260011.A.c.a.a.a.a	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00940000165518	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT01090000260006.A.c.a.a.a.b.b.e	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.b.a	ENSGT01090000260011.A.c.a.a.a.a	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00940000165518	ENSGT00950000182940.b.b #18	ENSGT00490000043329.a.a.a.pb.b.a.a	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000162210.m.b	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Dog	MODERN SPECIES	22	ENSCAFG00845012430	OR6C1K (ENSCAFG00845012419)	OR6C85 (ENSCAFG00845012411)	OR6C63 (ENSCAFG00845012396)	ENSCAFG00845012365 #10	ENSCAFG00845012043	HMGCR (ENSCAFG00845011849) #12	CERT1 (ENSCAFG00845011641) #13	POLK (ENSCAFG00845011326) #14	POC5 (ENSCAFG00845011018) #16	ENSCAFG00845010968	SV2C (ENSCAFG00845010918) #18	ENSCAFG00845010892	F2RL2 (ENSCAFG00845010868) #19	IQGAP2 (ENSCAFG00845010426) #20	F2R (ENSCAFG00845010276) #21	F2RL1 (ENSCAFG00845010229) #22	CRHBP (ENSCAFG00845010170) #24	AGGF1 (ENSCAFG00845010001) #25	ZBED3 (ENSCAFG00845009893) #26	PDE8B (ENSCAFG00845009245) #27	WDR41 (ENSCAFG00845008881) #28	OTP (ENSCAFG00845008819) #29	TBCA (ENSCAFG00845008735) #30	AP3B1 (ENSCAFG00845008344) #31	ENSCAFG00845008191	SCAMP1 (ENSCAFG00845008131) #33	ENSCAFG00845008040 #34	ENSCAFG00845007955	ENSCAFG00845007889	ARSB (ENSCAFG00845007767) #36
Dingo	MODERN SPECIES	138	ENSCAFG00020024901	ENSCAFG00020024903	ENSCAFG00020024905	GCNT4 (ENSCAFG00020024910) #10	ENSCAFG00020024911 #11	ENSCAFG00020024915	HMGCR (ENSCAFG00020024948) #12	CERT1 (ENSCAFG00020025372) #13	POLK (ENSCAFG00020025589) #14	POC5 (ENSCAFG00020025700) #16	ENSCAFG00020025705	SV2C (ENSCAFG00020025712) #18	IQGAP2 (ENSCAFG00020025766) #20	ENSCAFG00020025957	F2RL2 (ENSCAFG00020025959) #19	F2R (ENSCAFG00020025967) #21	F2RL1 (ENSCAFG00020025974) #22	CRHBP (ENSCAFG00020025980) #24	AGGF1 (ENSCAFG00020025988) #25	ENSCAFG00020025990 #26	PDE8B (ENSCAFG00020026022) #27	WDR41 (ENSCAFG00020026182) #28	OTP (ENSCAFG00020026185) #29	TBCA (ENSCAFG00020026187) #30	AP3B1 (ENSCAFG00020026199) #31	SCAMP1 (ENSCAFG00020026258) #33	LHFPL2 (ENSCAFG00020026266) #34	ENSCAFG00020026271	ENSCAFG00020026272	ENSCAFG00020026273	ARSB (ENSCAFG00020026275) #36
Red fox	MODERN SPECIES	27	ENSVVUG00000025235	ENSVVUG00000025234	GCNT4 (ENSVVUG00000025231) #10	ENSVVUG00000025226	ANKRD31 (ENSVVUG00000025202)	HMGCR (ENSVVUG00000025191) #12	COL4A3BP (ENSVVUG00000025182) #13	POLK (ENSVVUG00000025177) #14	POC5 (ENSVVUG00000025166) #16	ENSVVUG00000025164	ENSVVUG00000025163	SV2C (ENSVVUG00000025157) #18	ENSVVUG00000025148	F2RL2 (ENSVVUG00000025145) #19	IQGAP2 (ENSVVUG00000025132) #20	F2R (ENSVVUG00000025128) #21	F2RL1 (ENSVVUG00000025124) #22	CRHBP (ENSVVUG00000025121) #24	AGGF1 (ENSVVUG00000025114) #25	PDE8B (ENSVVUG00000025106) #27	WDR41 (ENSVVUG00000025096) #28	OTP (ENSVVUG00000025094) #29	ENSVVUG00000025093	AP3B1 (ENSVVUG00000025056) #31	SCAMP1 (ENSVVUG00000025046) #33	LHFPL2 (ENSVVUG00000025039) #34	ENSVVUG00000025030	BHMT (ENSVVUG00000025022)	BHMT2 (ENSVVUG00000025018)	DMGDH (ENSVVUG00000025013) #37	JMY (ENSVVUG00000024988)
Felidae	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00390000018706.m.a #7	ENSGT00900000143472 #8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Tiger	MODERN SPECIES	134	HEXB (ENSPTIG00000006120)	GFM2 (ENSPTIG00000021698)	ENSPTIG00000021404 #7	ENSPTIG00000005537 #8	FAM169A (ENSPTIG00000020456) #9	GCNT4 (ENSPTIG00000005529) #10	ENSPTIG00000019989 #11	HMGCR (ENSPTIG00000018612) #12	CERT1 (ENSPTIG00000016589) #13	POLK (ENSPTIG00000014864) #14	ANKDD1B (ENSPTIG00000013441) #15	POC5 (ENSPTIG00000011856) #16	SV2C (ENSPTIG00000010098) #18	F2RL2 (ENSPTIG00000009666) #19	IQGAP2 (ENSPTIG00000021975) #20	F2R (ENSPTIG00000021894) #21	F2RL1 (ENSPTIG00000021859) #22	S100Z (ENSPTIG00000021832) #23	CRHBP (ENSPTIG00000021691) #24	AGGF1 (ENSPTIG00000021519) #25	PDE8B (ENSPTIG00000014747) #27	WDR41 (ENSPTIG00000011923) #28	OTP (ENSPTIG00000011169) #29	TBCA (ENSPTIG00000009506) #30	AP3B1 (ENSPTIG00000008485) #31	SCAMP1 (ENSPTIG00000007335) #33	LHFPL2 (ENSPTIG00000006957) #34	ARSB (ENSPTIG00000003156) #36	DMGDH (ENSPTIG00000021430) #37	BHMT2 (ENSPTIG00000020984)	BHMT (ENSPTIG00000020191)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00390000018706.m.a #7	ENSGT00900000143472 #8	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000154742.b	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00390000003115.j #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00390000009443.j #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37
lion	MODERN SPECIES		ENSPLOG00000002537 #8	FAM169A (ENSPLOG00000002487) #9	ENSPLOG00000002461	GCNT4 (ENSPLOG00000002455) #10	ENSPLOG00000002438 #11	ENSPLOG00000002411	HMGCR (ENSPLOG00000002361) #12	CERT1 (ENSPLOG00000002211) #13	POLK (ENSPLOG00000002076) #14	ANKDD1B (ENSPLOG00000002011) #15	POC5 (ENSPLOG00000001946) #16	ENSPLOG00000001913	SV2C (ENSPLOG00000001869) #18	F2RL2 (ENSPLOG00000001850) #19	IQGAP2 (ENSPLOG00000001777) #20	F2R (ENSPLOG00000001727) #21	F2RL1 (ENSPLOG00000001714) #22	S100Z (ENSPLOG00000001701) #23	CRHBP (ENSPLOG00000001686) #24	AGGF1 (ENSPLOG00000001638) #25	ZBED3 (ENSPLOG00000001610) #26	PDE8B (ENSPLOG00000001335) #27	WDR41 (ENSPLOG00000001110) #28	OTP (ENSPLOG00000001071) #29	TBCA (ENSPLOG00000001046) #30	AP3B1 (ENSPLOG00000000902) #31	SCAMP1 (ENSPLOG00000000849) #33	LHFPL2 (ENSPLOG00000000832) #34	ENSPLOG00000000818 #35	ARSB (ENSPLOG00000000803) #36	DMGDH (ENSPLOG00000000773) #37
leopard	MODERN SPECIES	40	GFM2 (ENSPPRG00000002671)	ENSPPRG00000003110 #7	ENSPPRG00000004205 #8	FAM169A (ENSPPRG00000005349) #9	GCNT4 (ENSPPRG00000017075) #10	ENSPPRG00000006600 #11	HMGCR (ENSPPRG00000008332) #12	CERT1 (ENSPPRG00000009941) #13	POLK (ENSPPRG00000012504) #14	ANKDD1B (ENSPPRG00000013528) #15	POC5 (ENSPPRG00000017915) #16	ENSPPRG00000021813 #17	SV2C (ENSPPRG00000024498) #18	F2RL2 (ENSPPRG00000024088) #19	IQGAP2 (ENSPPRG00000001278) #20	F2R (ENSPPRG00000001748) #21	F2RL1 (ENSPPRG00000001778) #22	S100Z (ENSPPRG00000002129) #23	CRHBP (ENSPPRG00000002387) #24	AGGF1 (ENSPPRG00000004438) #25	ZBED3 (ENSPPRG00000017742) #26	PDE8B (ENSPPRG00000012726) #27	WDR41 (ENSPPRG00000015058) #28	OTP (ENSPPRG00000015334) #29	TBCA (ENSPPRG00000018237) #30	AP3B1 (ENSPPRG00000019993) #31	ENSPPRG00000020501 #32	SCAMP1 (ENSPPRG00000000330) #33	LHFPL2 (ENSPPRG00000000681) #34	ENSPPRG00000000967 #35	ARSB (ENSPPRG00000002867) #36
Cat	MODERN SPECIES		HEXB (ENSFCAG00000018403)	GFM2 (ENSFCAG00000011977)	ENSFCAG00000011978 #7	FAM169A (ENSFCAG00000031781) #9	GCNT4 (ENSFCAG00000010125) #10	ENSFCAG00000029332 #11	HMGCR (ENSFCAG00000000007) #12	CERT1 (ENSFCAG00000031307) #13	POLK (ENSFCAG00000001614) #14	ANKDD1B (ENSFCAG00000009659) #15	POC5 (ENSFCAG00000009661) #16	ENSFCAG00000048312 #17	SV2C (ENSFCAG00000003321) #18	IQGAP2 (ENSFCAG00000003323) #20	F2RL2 (ENSFCAG00000040850) #19	F2R (ENSFCAG00000003325) #21	S100Z (ENSFCAG00000044986) #23	CRHBP (ENSFCAG00000023090) #24	AGGF1 (ENSFCAG00000018724) #25	ZBED3 (ENSFCAG00000044339) #26	PDE8B (ENSFCAG00000005432) #27	WDR41 (ENSFCAG00000026146) #28	OTP (ENSFCAG00000032267) #29	TBCA (ENSFCAG00000026107) #30	AP3B1 (ENSFCAG00000030762) #31	SCAMP1 (ENSFCAG00000007805) #33	ARSB (ENSFCAG00000033754) #36	ENSFCAG00000035649	DMGDH (ENSFCAG00000011882) #37	BHMT (ENSFCAG00000040239)	JMY (ENSFCAG00000025959)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Equus	ANCESTRAL SPECIES	6	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Horse	MODERN SPECIES	5	GFM2 (ENSECAG00000006640)	NSA2 (ENSECAG00000005528) #7	FAM169A (ENSECAG00000024132) #9	GCNT4 (ENSECAG00000005515) #10	ANKRD31 (ENSECAG00000024123) #11	HMGCR (ENSECAG00000021330) #12	CERT1 (ENSECAG00000017349) #13	POLK (ENSECAG00000014876) #14	ANKDD1B (ENSECAG00000014521) #15	POC5 (ENSECAG00000013824) #16	SV2C (ENSECAG00000010569) #18	F2RL2 (ENSECAG00000010531) #19	IQGAP2 (ENSECAG00000004274) #20	F2RL1 (ENSECAG00000002867) #22	S100Z (ENSECAG00000000977) #23	F2R (ENSECAG00000004055) #21	CRHBP (ENSECAG00000017949) #24	ZBED3 (ENSECAG00000040464) #26	PDE8B (ENSECAG00000012189) #27	WDR41 (ENSECAG00000009496) #28	OTP (ENSECAG00000009423) #29	TBCA (ENSECAG00000009383) #30	AP3B1 (ENSECAG00000022849) #31	SCAMP1 (ENSECAG00000021921) #33	LHFPL2 (ENSECAG00000021890) #34	ARSB (ENSECAG00000020847) #36	BHMT2 (ENSECAG00000018440)	DMGDH (ENSECAG00000019851) #37	BHMT (ENSECAG00000015626)	ENSECAG00000052194	JMY (ENSECAG00000014968)
Donkey	MODERN SPECIES	29	ENC1 (ENSEASG00005028078)	HEXB (ENSEASG00005018246)	GFM2 (ENSEASG00005018285)	ENSEASG00005018414 #7	FAM169A (ENSEASG00005018417) #9	GCNT4 (ENSEASG00005037231) #10	ANKRD31 (ENSEASG00005018424) #11	HMGCR (ENSEASG00005018428) #12	CERT1 (ENSEASG00005018435) #13	POLK (ENSEASG00005018442) #14	ANKDD1B (ENSEASG00005035528) #15	POC5 (ENSEASG00005018452) #16	SV2C (ENSEASG00005018455) #18	F2RL2 (ENSEASG00005036850) #19	IQGAP2 (ENSEASG00005000244) #20	F2R (ENSEASG00005037330) #21	F2RL1 (ENSEASG00005001812) #22	S100Z (ENSEASG00005001816) #23	CRHBP (ENSEASG00005001822) #24	AGGF1 (ENSEASG00005001829) #25	ZBED3 (ENSEASG00005034455) #26	PDE8B (ENSEASG00005001845) #27	WDR41 (ENSEASG00005001862) #28	OTP (ENSEASG00005001863) #29	ENSEASG00005032921	ENSEASG00005028729 #30	AP3B1 (ENSEASG00005001889) #31	SCAMP1 (ENSEASG00005001900) #33	LHFPL2 (ENSEASG00005001904) #34	ARSB (ENSEASG00005001910) #36	DMGDH (ENSEASG00005001920) #37
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Greater horseshoe bat	MODERN SPECIES	25	ENC1 (ENSRFEG00010012008)	HEXB (ENSRFEG00010012089)	GFM2 (ENSRFEG00010012225)	ENSRFEG00010012400 #7	FAM169A (ENSRFEG00010012573) #9	GCNT4 (ENSRFEG00010012676) #10	ANKRD31 (ENSRFEG00010012703) #11	HMGCR (ENSRFEG00010013017) #12	CERT1 (ENSRFEG00010013140) #13	POLK (ENSRFEG00010013650) #14	ANKDD1B (ENSRFEG00010013842) #15	POC5 (ENSRFEG00010014089) #16	SV2C (ENSRFEG00010014249) #18	IQGAP2 (ENSRFEG00010014371) #20	F2RL2 (ENSRFEG00010015786) #19	F2R (ENSRFEG00010015825) #21	F2RL1 (ENSRFEG00010015917) #22	CRHBP (ENSRFEG00010015859) #24	S100Z (ENSRFEG00010015950) #23	AGGF1 (ENSRFEG00010016035) #25	ZBED3 (ENSRFEG00010016086) #26	PDE8B (ENSRFEG00010016179) #27	WDR41 (ENSRFEG00010017690) #28	OTP (ENSRFEG00010017860) #29	TBCA (ENSRFEG00010017900) #30	AP3B1 (ENSRFEG00010018051) #31	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #33	LHFPL2 (ENSRFEG00010018294) #34	ARSB (ENSRFEG00010018336) #36
Microbat	MODERN SPECIES	937	ARHGEF28 (ENSMLUG00000004723)	ENC1 (ENSMLUG00000004745)	HEXB (ENSMLUG00000004748)	GFM2 (ENSMLUG00000004761)	ENSMLUG00000014464 #7	FAM169A (ENSMLUG00000014466) #9	GCNT4 (ENSMLUG00000003938) #10	HMGCR (ENSMLUG00000004238) #12	CERT1 (ENSMLUG00000004251) #13	POLK (ENSMLUG00000015681) #14	ANKDD1B (ENSMLUG00000015695) #15	POC5 (ENSMLUG00000015701) #16	SV2C (ENSMLUG00000006658) #18	F2RL2 (ENSMLUG00000006767) #19	IQGAP2 (ENSMLUG00000006695) #20	F2R (ENSMLUG00000029641) #21	ENSMLUG00000006790	CRHBP (ENSMLUG00000025557) #24	AGGF1 (ENSMLUG00000016792) #25	PDE8B (ENSMLUG00000016798) #27	WDR41 (ENSMLUG00000016814) #28	OTP (ENSMLUG00000028781) #29	TBCA (ENSMLUG00000001087) #30	AP3B1 (ENSMLUG00000006637) #31	SCAMP1 (ENSMLUG00000006679) #33	LHFPL2 (ENSMLUG00000006700) #34	ARSB (ENSMLUG00000001949) #36	DMGDH (ENSMLUG00000009128) #37	BHMT2 (ENSMLUG00000009152)	BHMT (ENSMLUG00000009164)	JMY (ENSMLUG00000000275)
Megabat	MODERN SPECIES	259													SV2C (ENSPVAG00000009721) #18	IQGAP2 (ENSPVAG00000009723) #20	F2RL2 (ENSPVAG00000009726) #19	F2R (ENSPVAG00000009728) #21	F2RL1 (ENSPVAG00000009729) #22	S100Z (ENSPVAG00000009731) #23	CRHBP (ENSPVAG00000009732) #24	AGGF1 (ENSPVAG00000009733) #25
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Suina	ANCESTRAL SPECIES	11	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026.f #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT01050000246247	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Pig	MODERN SPECIES	10	ENSSSCG00000014075 #7	FAM169A (ENSSSCG00000014076) #9	GCNT4 (ENSSSCG00000029710) #10	ENSSSCG00000014078	ANKRD31 (ENSSSCG00000014079) #11	HMGCR (ENSSSCG00000014080) #12	CERT1 (ENSSSCG00000014081) #13	ENSSSCG00000058855	POLK (ENSSSCG00000014082) #14	ANKDD1B (ENSSSCG00000014083) #15	POC5 (ENSSSCG00000014084) #16	SV2C (ENSSSCG00000034062) #18	IQGAP2 (ENSSSCG00000014088) #20	ENSSSCG00000045040	F2RL2 (ENSSSCG00000037582) #19	F2R (ENSSSCG00000035355) #21	F2RL1 (ENSSSCG00000014091) #22	S100Z (ENSSSCG00000014092) #23	CRHBP (ENSSSCG00000014093) #24	AGGF1 (ENSSSCG00000014094) #25	ENSSSCG00000050058	PDE8B (ENSSSCG00000014097) #27	ENSSSCG00000014096	ENSSSCG00000051837 #28	ENSSSCG00000014098 #28	OTP (ENSSSCG00000014099) #29	TBCA (ENSSSCG00000014100) #30	ENSSSCG00000034241	AP3B1 (ENSSSCG00000014101) #31	SCAMP1 (ENSSSCG00000034795) #33	LHFPL2 (ENSSSCG00000028536) #34
Chacoan peccary	MODERN SPECIES	204								HMGCR (ENSCWAG00000003368) #12	CERT1 (ENSCWAG00000003403) #13	POLK (ENSCWAG00000003477) #14	ANKDD1B (ENSCWAG00000003540) #15	POC5 (ENSCWAG00000003563) #16	SV2C (ENSCWAG00000003605) #18	IQGAP2 (ENSCWAG00000003644) #20	F2RL2 (ENSCWAG00000007970) #19	F2R (ENSCWAG00000008004) #21	F2RL1 (ENSCWAG00000008039) #22	ENSCWAG00000008077 #23	CRHBP (ENSCWAG00000008117) #24	AGGF1 (ENSCWAG00000008243) #25	ZBED3 (ENSCWAG00000008305) #26	PDE8B (ENSCWAG00000008441) #27	WDR41 (ENSCWAG00000010043) #28	OTP (ENSCWAG00000010193) #29	TBCA (ENSCWAG00000010250) #30	AP3B1 (ENSCWAG00000010356) #31	SCAMP1 (ENSCWAG00000010485) #33	LHFPL2 (ENSCWAG00000010566) #34	ARSB (ENSCWAG00000010599) #36	DMGDH (ENSCWAG00000010632) #37	BHMT2 (ENSCWAG00000010749)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00390000018706.n ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Alpaca	MODERN SPECIES	961														IQGAP2 (ENSVPAG00000005272) #20	F2RL2 (ENSVPAG00000005275) #19	F2R (ENSVPAG00000005276) #21
Arabian camel	MODERN SPECIES	22	HEXB (ENSCDRG00005002726)	GFM2 (ENSCDRG00005002671)	ENSCDRG00005002639 ##7	FAM169A (ENSCDRG00005002601) #9	ENSCDRG00005002592	GCNT4 (ENSCDRG00005002583) #10	ANKRD31 (ENSCDRG00005002546) #11	HMGCR (ENSCDRG00005002491) #12	CERT1 (ENSCDRG00005001455) #13	POLK (ENSCDRG00005001206) #14	ANKDD1B (ENSCDRG00005001160) #15	POC5 (ENSCDRG00005001127) #16	SV2C (ENSCDRG00005001113) #18	F2RL2 (ENSCDRG00005001095) #19	IQGAP2 (ENSCDRG00005000766) #20	F2R (ENSCDRG00005000707) #21	F2RL1 (ENSCDRG00005000688) #22	S100Z (ENSCDRG00005000678) #23	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645) #24	AGGF1 (ENSCDRG00005000618) #25	ZBED3 (ENSCDRG00005000608) #26	PDE8B (ENSCDRG00005000565) #27	WDR41 (ENSCDRG00005000509) #28	OTP (ENSCDRG00005000470) #29	TBCA (ENSCDRG00005000444) #30	AP3B1 (ENSCDRG00005000366) #31	SCAMP1 (ENSCDRG00005000299) #33	LHFPL2 (ENSCDRG00005000275) #34	ARSB (ENSCDRG00005000234) #36	DMGDH (ENSCDRG00005000085) #37
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Dolphin	MODERN SPECIES	95													SV2C (ENSTTRG00000007297) #18	IQGAP2 (ENSTTRG00000007299) #20	F2RL2 (ENSTTRG00000007301) #19	F2R (ENSTTRG00000007302) #21
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706.m.a #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Narwhal	MODERN SPECIES	298	HEXB (ENSMMNG00015006771)	GFM2 (ENSMMNG00015006841)	ENSMMNG00015006875 #7	FAM169A (ENSMMNG00015006911) #9	GCNT4 (ENSMMNG00015006954) #10	ANKRD31 (ENSMMNG00015007010) #11	HMGCR (ENSMMNG00015007107) #12	CERT1 (ENSMMNG00015007218) #13	POLK (ENSMMNG00015007374) #14	ANKDD1B (ENSMMNG00015007467) #15	POC5 (ENSMMNG00015007540) #16	SV2C (ENSMMNG00015007600) #18	ENSMMNG00015007640	IQGAP2 (ENSMMNG00015007731) #20	F2RL2 (ENSMMNG00015007923) #19	F2R (ENSMMNG00015007933) #21	F2RL1 (ENSMMNG00015007943) #22	S100Z (ENSMMNG00015007958) #23	CRHBP (ENSMMNG00015007977) #24	AGGF1 (ENSMMNG00015008009) #25	ZBED3 (ENSMMNG00015008041) #26	PDE8B (ENSMMNG00015008112) #27	WDR41 (ENSMMNG00015008176) #28	OTP (ENSMMNG00015008215) #29	TBCA (ENSMMNG00015008230) #30	AP3B1 (ENSMMNG00015008260) #31	SCAMP1 (ENSMMNG00015008303) #33	LHFPL2 (ENSMMNG00015008328) #34	ARSB (ENSMMNG00015008346) #36	DMGDH (ENSMMNG00015008374) #37	BHMT2 (ENSMMNG00015008393)
Beluga whale	MODERN SPECIES	71	HEXB (ENSDLEG00000009012)	GFM2 (ENSDLEG00000008794)	NSA2 (ENSDLEG00000008766) #7	FAM169A (ENSDLEG00000008731) #9	GCNT4 (ENSDLEG00000008712) #10	ANKRD31 (ENSDLEG00000008542) #11	HMGCR (ENSDLEG00000008447) #12	COL4A3BP (ENSDLEG00000008328) #13	POLK (ENSDLEG00000008261) #14	POC5 (ENSDLEG00000008196) #16	ENSDLEG00000008154	SV2C (ENSDLEG00000008107) #18	ENSDLEG00000008092	F2RL2 (ENSDLEG00000008080) #19	IQGAP2 (ENSDLEG00000008039) #20	F2R (ENSDLEG00000008028) #21	F2RL1 (ENSDLEG00000008016) #22	S100Z (ENSDLEG00000008008) #23	CRHBP (ENSDLEG00000007986) #24	AGGF1 (ENSDLEG00000007958) #25	ZBED3 (ENSDLEG00000007936) #26	PDE8B (ENSDLEG00000015062) #27	WDR41 (ENSDLEG00000014960) #28	OTP (ENSDLEG00000014945) #29	TBCA (ENSDLEG00000014906) #30	AP3B1 (ENSDLEG00000014741) #31	SCAMP1 (ENSDLEG00000014708) #33	LHFPL2 (ENSDLEG00000014699) #34	ARSB (ENSDLEG00000014686) #36	DMGDH (ENSDLEG00000014641) #37	BHMT2 (ENSDLEG00000014617)
Vaquita	MODERN SPECIES	14	ENC1 (ENSPSNG00000006635)	HEXB (ENSPSNG00000006550)	GFM2 (ENSPSNG00000006458)	ENSPSNG00000006396 #7	FAM169A (ENSPSNG00000006255) #9	GCNT4 (ENSPSNG00000006178) #10	ANKRD31 (ENSPSNG00000006120) #11	HMGCR (ENSPSNG00000006005) #12	CERT1 (ENSPSNG00000005809) #13	POLK (ENSPSNG00000005609) #14	POC5 (ENSPSNG00000005438) #16	ENSPSNG00000005362	SV2C (ENSPSNG00000005309) #18	F2RL2 (ENSPSNG00000005286) #19	IQGAP2 (ENSPSNG00000005144) #20	F2R (ENSPSNG00000005065) #21	F2RL1 (ENSPSNG00000005843) #22	S100Z (ENSPSNG00000005821) #23	CRHBP (ENSPSNG00000005773) #24	AGGF1 (ENSPSNG00000005724) #25	ZBED3 (ENSPSNG00000005710) #26	PDE8B (ENSPSNG00000005114) #27	WDR41 (ENSPSNG00000004776) #28	OTP (ENSPSNG00000004725) #29	TBCA (ENSPSNG00000004666) #30	AP3B1 (ENSPSNG00000004553) #31	SCAMP1 (ENSPSNG00000004447) #33	LHFPL2 (ENSPSNG00000004403) #34	ARSB (ENSPSNG00000004356) #36	DMGDH (ENSPSNG00000004287) #37	BHMT2 (ENSPSNG00000004227)
Sperm whale	MODERN SPECIES	19	HEXB (ENSPCTG00005001638)	GFM2 (ENSPCTG00005001720)	NSA2 (ENSPCTG00005001800) #7	FAM169A (ENSPCTG00005001823) #9	ENSPCTG00005001839	GCNT4 (ENSPCTG00005001860) #10	ANKRD31 (ENSPCTG00005001908) #11	HMGCR (ENSPCTG00005002015) #12	COL4A3BP (ENSPCTG00005002102) #13	POLK (ENSPCTG00005002299) #14	POC5 (ENSPCTG00005002372) #16	SV2C (ENSPCTG00005002439) #18	IQGAP2 (ENSPCTG00005002535) #20	F2RL2 (ENSPCTG00005002767) #19	ENSPCTG00005002778	F2R (ENSPCTG00005002792) #21	F2RL1 (ENSPCTG00005002799) #22	S100Z (ENSPCTG00005002807) #23	AGGF1 (ENSPCTG00005002832) #25	ZBED3 (ENSPCTG00005002866) #26	PDE8B (ENSPCTG00005002983) #27	WDR41 (ENSPCTG00005003516) #28	OTP (ENSPCTG00005003577) #29	TBCA (ENSPCTG00005003597) #30	AP3B1 (ENSPCTG00005003664) #31	SCAMP1 (ENSPCTG00005003758) #33	LHFPL2 (ENSPCTG00005003792) #34	ARSB (ENSPCTG00005003811) #36	DMGDH (ENSPCTG00005003853) #37	BHMT (ENSPCTG00005003876)	JMY (ENSPCTG00005003899)
Blue whale	MODERN SPECIES	14	HEXB (ENSBMSG00010004665)	GFM2 (ENSBMSG00010004689)	ENSBMSG00010004702 #7	ENSBMSG00010004714 #9	ENSBMSG00010004732	GCNT4 (ENSBMSG00010004754) #10	ANKRD31 (ENSBMSG00010004774) #11	HMGCR (ENSBMSG00010004832) #12	CERT1 (ENSBMSG00010004912) #13	POLK (ENSBMSG00010005438) #14	POC5 (ENSBMSG00010005501) #16	SV2C (ENSBMSG00010005531) #18	ENSBMSG00010005549	IQGAP2 (ENSBMSG00010005591) #20	F2RL2 (ENSBMSG00010005686) #19	F2R (ENSBMSG00010005694) #21	F2RL1 (ENSBMSG00010005699) #22	S100Z (ENSBMSG00010005711) #23	CRHBP (ENSBMSG00010005714) #24	AGGF1 (ENSBMSG00010005734) #25	ZBED3 (ENSBMSG00010005760) #26	PDE8B (ENSBMSG00010005858) #27	WDR41 (ENSBMSG00010006297) #28	OTP (ENSBMSG00010006319) #29	ENSBMSG00010006335 #30	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #31	SCAMP1 (ENSBMSG00010006378) #33	LHFPL2 (ENSBMSG00010006395) #34	ARSB (ENSBMSG00010006407) #36	DMGDH (ENSBMSG00010006427) #37
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Yarkand deer	MODERN SPECIES	3	SIMC1 (ENSCHYG00000005071)	THOC3 (ENSCHYG00000005114)	CPLX2 (ENSCHYG00000005163)	HRH2 (ENSCHYG00000005212)	SFXN1 (ENSCHYG00000005262)	DRD1 (ENSCHYG00000005319)	GCNT4 (ENSCHYG00000005367) #10	ANKRD31 (ENSCHYG00000005425) #11	HMGCR (ENSCHYG00000005715) #12	CERT1 (ENSCHYG00000005851) #13	POLK (ENSCHYG00000006041) #14	POC5 (ENSCHYG00000006247) #16	SV2C (ENSCHYG00000006307) #18	IQGAP2 (ENSCHYG00000006385) #20	F2RL2 (ENSCHYG00000006675) #19	F2R (ENSCHYG00000006697) #21	ENSCHYG00000006719	F2RL1 (ENSCHYG00000006741) #22	S100Z (ENSCHYG00000006771) #23	CRHBP (ENSCHYG00000006799) #24	AGGF1 (ENSCHYG00000006866) #25	ZBED3 (ENSCHYG00000006906) #26	ENSCHYG00000006937	ENSCHYG00000006952	ENSCHYG00000006962 #27	ENSCHYG00000007028 #27	WDR41 (ENSCHYG00000007090) #28	OTP (ENSCHYG00000007305) #29	TBCA (ENSCHYG00000007320) #30	ENSCHYG00000007338	ENSCHYG00000007344
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Bovinae	ANCESTRAL SPECIES	33	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.j	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Bos	ANCESTRAL SPECIES	31	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Domestic yak	MODERN SPECIES	2	HRH2 (ENSBGRG00000011598)	ENSBGRG00000011575	SFXN1 (ENSBGRG00000011347)	DRD1 (ENSBGRG00000011292)	GCNT4 (ENSBGRG00000011247) #10	ENSBGRG00000011228	ANKRD31 (ENSBGRG00000010828) #11	HMGCR (ENSBGRG00000010597) #12	CERT1 (ENSBGRG00000009779) #13	POLK (ENSBGRG00000009306) #14	POC5 (ENSBGRG00000008737) #16	SV2C (ENSBGRG00000008621) #18	ENSBGRG00000008593	F2RL2 (ENSBGRG00000008567) #19	IQGAP2 (ENSBGRG00000007931) #20	F2R (ENSBGRG00000007892) #21	F2RL1 (ENSBGRG00000007822) #22	ENSBGRG00000007803	S100Z (ENSBGRG00000007761) #23	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412) #25	ZBED3 (ENSBGRG00000007380) #26	PDE8B (ENSBGRG00000006555) #27	WDR41 (ENSBGRG00000006363) #28	OTP (ENSBGRG00000006298) #29	TBCA (ENSBGRG00000006236) #30	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #31	SCAMP1 (ENSBGRG00000005900) #33	LHFPL2 (ENSBGRG00000005875) #34	ENSBGRG00000005848
Wild yak	MODERN SPECIES	297						GCNT4 (ENSBMUG00000012260) #10	ANKRD31 (ENSBMUG00000012237) #11	HMGCR (ENSBMUG00000012171) #12	CERT1 (ENSBMUG00000011873) #13	POLK (ENSBMUG00000011634) #14	POC5 (ENSBMUG00000011568) #16	SV2C (ENSBMUG00000011496) #18	ENSBMUG00000011462	F2RL2 (ENSBMUG00000011445) #19	IQGAP2 (ENSBMUG00000011350) #20	F2R (ENSBMUG00000011164) #21	F2RL1 (ENSBMUG00000011152) #22	S100Z (ENSBMUG00000011148) #23	AGGF1 (ENSBMUG00000011125) #25	PDE8B (ENSBMUG00000011054) #27	WDR41 (ENSBMUG00000010747) #28	OTP (ENSBMUG00000010682) #29	TBCA (ENSBMUG00000010673) #30	ENSBMUG00000010660	ENSBMUG00000010637
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
Hybrid Bos Indicus	MODERN SPECIES	1						GCNT4 (ENSBIXG00005011458) #10	ANKRD31 (ENSBIXG00005011423) #11	HMGCR (ENSBIXG00005011318) #12	CERT1 (ENSBIXG00005011247) #13	POLK (ENSBIXG00005011147) #14	POC5 (ENSBIXG00005010780) #16	SV2C (ENSBIXG00005010694) #18	ENSBIXG00005007521	IQGAP2 (ENSBIXG00005010623) #20	F2RL2 (ENSBIXG00005010387) #19	F2R (ENSBIXG00005000862) #21	S100Z (ENSBIXG00005010347) #23	CRHBP (ENSBIXG00005000840) #24	AGGF1 (ENSBIXG00005010286) #25	ENSBIXG00005010267	PDE8B (ENSBIXG00005010189) #27	ENSBIXG00005000677	WDR41 (ENSBIXG00005009893) #28	OTP (ENSBIXG00005009799) #29	TBCA (ENSBIXG00005000599) #30	ENSBIXG00005009736	AP3B1 (ENSBIXG00005009658) #31	ENSBIXG00005009460	SCAMP1 (ENSBIXG00005009438) #33	ARSB (ENSBIXG00005009357) #36	ENSBIXG00005009344
Cow	MODERN SPECIES	1	THOC3 (ENSBTAG00000035174)	CPLX2 (ENSBTAG00000054924)	HRH2 (ENSBTAG00000044071)	SFXN1 (ENSBTAG00000014536)	DRD1 (ENSBTAG00000047719)	GCNT4 (ENSBTAG00000050091) #10	ANKRD31 (ENSBTAG00000024878) #11	HMGCR (ENSBTAG00000007840) #12	CERT1 (ENSBTAG00000000081) #13	POLK (ENSBTAG00000004028) #14	POC5 (ENSBTAG00000007114) #16	SV2C (ENSBTAG00000017507) #18	ENSBTAG00000052974	IQGAP2 (ENSBTAG00000000897) #20	F2RL2 (ENSBTAG00000000898) #19	F2R (ENSBTAG00000020199) #21	F2RL1 (ENSBTAG00000034848) #22	S100Z (ENSBTAG00000020201) #23	CRHBP (ENSBTAG00000020202) #24	AGGF1 (ENSBTAG00000034823) #25	ZBED3 (ENSBTAG00000052845) #26	PDE8B (ENSBTAG00000020205) #27	WDR41 (ENSBTAG00000020212) #28	OTP (ENSBTAG00000009249) #29	TBCA (ENSBTAG00000003263) #30	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #31	SCAMP1 (ENSBTAG00000007371) #33	LHFPL2 (ENSBTAG00000007374) #34	ARSB (ENSBTAG00000008341) #36	DMGDH (ENSBTAG00000002110) #37
American bison	MODERN SPECIES	3169		ENSBBBG00000005947	ENSBBBG00000005945	ENSBBBG00000022510	GCNT4 (ENSBBBG00000005939) #10	ANKRD31 (ENSBBBG00000022499) #11	HMGCR (ENSBBBG00000005907) #12	CERT1 (ENSBBBG00000022291) #13	POLK (ENSBBBG00000021965) #14	ANKDD1B (ENSBBBG00000008030) #15	POC5 (ENSBBBG00000021773) #16	SV2C (ENSBBBG00000006918) #18	ENSBBBG00000021689	IQGAP2 (ENSBBBG00000021677) #20	F2RL2 (ENSBBBG00000021481) #19	F2R (ENSBBBG00000021478) #21	F2RL1 (ENSBBBG00000021471) #22	S100Z (ENSBBBG00000021469) #23	CRHBP (ENSBBBG00000021464) #24	AGGF1 (ENSBBBG00000021443) #25	PDE8B (ENSBBBG00000021396) #27	WDR41 (ENSBBBG00000021018) #28	TBCA (ENSBBBG00000005639) #30	ENSBBBG00000005636	AP3B1 (ENSBBBG00000005629) #31	SCAMP1 (ENSBBBG00000020857) #33	LHFPL2 (ENSBBBG00000020821) #34	ARSB (ENSBBBG00000020814) #36
Caprinae	ANCESTRAL SPECIES	30	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000164103 #26	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Goat	MODERN SPECIES	1	CPLX2 (ENSCHIG00000026084)	HRH2 (ENSCHIG00000022097)	SFXN1 (ENSCHIG00000022473)	DRD1 (ENSCHIG00000024371)	ENSCHIG00000015735	GCNT4 (ENSCHIG00000008602) #10	ENSCHIG00000021264 #11	HMGCR (ENSCHIG00000015556) #12	CERT1 (ENSCHIG00000021950) #13	POLK (ENSCHIG00000008105) #14	ENSCHIG00000008486	POC5 (ENSCHIG00000009080) #16	SV2C (ENSCHIG00000016655) #18	F2RL2 (ENSCHIG00000002096) #19	IQGAP2 (ENSCHIG00000020854) #20	F2R (ENSCHIG00000022474) #21	F2RL1 (ENSCHIG00000026366) #22	S100Z (ENSCHIG00000018486) #23	CRHBP (ENSCHIG00000024251) #24	AGGF1 (ENSCHIG00000012662) #25	ZBED3 (ENSCHIG00000004171) #26	PDE8B (ENSCHIG00000023152) #27	WDR41 (ENSCHIG00000023139) #28	OTP (ENSCHIG00000018904) #29	TBCA (ENSCHIG00000021233) #30	AP3B1 (ENSCHIG00000018755) #31	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #33	LHFPL2 (ENSCHIG00000014180) #34	ARSB (ENSCHIG00000001349) #36	DMGDH (ENSCHIG00000021924) #37
Rambouillet Sheep	MODERN SPECIES	23	ENSOARG00020020067	THOC3 (ENSOARG00020020205)	CPLX2 (ENSOARG00020020263)	HRH2 (ENSOARG00020020329)	SFXN1 (ENSOARG00020020382)	ENSOARG00020020572	GCNT4 (ENSOARG00020020622) #10	ENSOARG00020020636 #11	HMGCR (ENSOARG00020020760) #12	CERT1 (ENSOARG00020020967) #13	POLK (ENSOARG00020021498) #14	POC5 (ENSOARG00020021712) #16	SV2C (ENSOARG00020021763) #18	IQGAP2 (ENSOARG00020021962) #20	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #21	F2RL1 (ENSOARG00020023002) #22	S100Z (ENSOARG00020023021) #23	CRHBP (ENSOARG00020023047) #24	AGGF1 (ENSOARG00020023108) #25	ZBED3 (ENSOARG00020023150) #26	PDE8B (ENSOARG00020023251) #27	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #28	OTP (ENSOARG00020024451) #29	TBCA (ENSOARG00020024464) #30	AP3B1 (ENSOARG00020024527) #31	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #33	ENSOARG00020024626 #23	LHFPL2 (ENSOARG00020024639) #34
Siberian musk deer	MODERN SPECIES	69	CPLX2 (ENSMMSG00000014503)	HRH2 (ENSMMSG00000014518)	SFXN1 (ENSMMSG00000014529)	DRD1 (ENSMMSG00000014544)	ENSMMSG00000014552	ENSMMSG00000014567	GCNT4 (ENSMMSG00000014582) #10	ANKRD31 (ENSMMSG00000014614) #11	HMGCR (ENSMMSG00000014812) #12	CERT1 (ENSMMSG00000014921) #13	POLK (ENSMMSG00000015182) #14	POC5 (ENSMMSG00000015294) #16	SV2C (ENSMMSG00000015327) #18	IQGAP2 (ENSMMSG00000015431) #20	F2RL2 (ENSMMSG00000015650) #19	F2R (ENSMMSG00000015666) #21	F2RL1 (ENSMMSG00000015677) #22	S100Z (ENSMMSG00000015687) #23	CRHBP (ENSMMSG00000015697) #24	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751) #25	ZBED3 (ENSMMSG00000015777) #26	PDE8B (ENSMMSG00000015917) #27	WDR41 (ENSMMSG00000017180) #28	OTP (ENSMMSG00000017274) #29	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #31	SCAMP1 (ENSMMSG00000017674) #33	LHFPL2 (ENSMMSG00000017736) #34	ARSB (ENSMMSG00000017759) #36
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.b.a ##7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00390000004454 #16	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00980000201383.C	ENSGT00940000163343	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37
koala	MODERN SPECIES	73	HEXB (ENSPCIG00000010267)	GFM2 (ENSPCIG00000020810)	NSA2 (ENSPCIG00000010269) ##7	FAM169A (ENSPCIG00000010270) #9	GCNT4 (ENSPCIG00000015727) #10	ENSPCIG00000015721	ENSPCIG00000027474	HMGCR (ENSPCIG00000027473) #12	CERT1 (ENSPCIG00000027317) #13	POLK (ENSPCIG00000027316) #14	ENSPCIG00000027312 #15	ENSPCIG00000027308 #16	SV2C (ENSPCIG00000027306) #18	F2RL2 (ENSPCIG00000029189) #19	IQGAP2 (ENSPCIG00000028736) #20	F2R (ENSPCIG00000002013) #21	F2RL1 (ENSPCIG00000002046) #22	S100Z (ENSPCIG00000036527) #23	CRHBP (ENSPCIG00000032088) #24	AGGF1 (ENSPCIG00000002077) #25	ENSPCIG00000002090	ENSPCIG00000002120	PDE8B (ENSPCIG00000002178) #27	WDR41 (ENSPCIG00000002260) #28	OTP (ENSPCIG00000014906) #29	ENSPCIG00000014903 #30	ENSPCIG00000017497 #31	ENSPCIG00000031686 #31	SCAMP1 (ENSPCIG00000024949) #33	LHFPL2 (ENSPCIG00000024952) #34	ARSB (ENSPCIG00000028419) #36
Common wonbat	MODERN SPECIES	1011								HMGCR (ENSVURG00010016331) #12	CERT1 (ENSVURG00010016371) #13	POLK (ENSVURG00010016425) #14	ANKDD1B (ENSVURG00010016454) #15	POC5 (ENSVURG00010016492) #16	SV2C (ENSVURG00010016524) #18	IQGAP2 (ENSVURG00010016559) #20	F2RL2 (ENSVURG00010016587) #19	F2R (ENSVURG00010016592) #21	F2RL1 (ENSVURG00010016599) #22	S100Z (ENSVURG00010016607) #23	CRHBP (ENSVURG00010016624) #24	ENSVURG00010016641	ENSVURG00010016651 #25	ENSVURG00010016663	ENSVURG00010016681	PDE8B (ENSVURG00010016850) #27	WDR41 (ENSVURG00010019111) #28	OTP (ENSVURG00010019123) #29	ENSVURG00010019130	ENSVURG00010019136	AP3B1 (ENSVURG00010019144) #31	ENSVURG00010019164	SCAMP1 (ENSVURG00010019174) #33
Tasmanian devil	MODERN SPECIES		ENC1 (ENSSHAG00000017407)	HEXB (ENSSHAG00000017520)	GFM2 (ENSSHAG00000017593)	NSA2 (ENSSHAG00000017654) ##7	FAM169A (ENSSHAG00000017681) #9	GCNT4 (ENSSHAG00000018019) #10	ENSSHAG00000018123	HMGCR (ENSSHAG00000004177) #12	CERT1 (ENSSHAG00000004954) #13	POLK (ENSSHAG00000006899) #14	ANKDD1B (ENSSHAG00000028889) #15	POC5 (ENSSHAG00000008712) #16	SV2C (ENSSHAG00000011331) #18	F2RL2 (ENSSHAG00000028606) #19	IQGAP2 (ENSSHAG00000001152) #20	F2R (ENSSHAG00000009153) #21	F2RL1 (ENSSHAG00000008088) #22	S100Z (ENSSHAG00000028739) #23	CRHBP (ENSSHAG00000006864) #24	AGGF1 (ENSSHAG00000004570) #25	PDE8B (ENSSHAG00000018263) #27	WDR41 (ENSSHAG00000018180) #28	OTP (ENSSHAG00000018090) #29	TBCA (ENSSHAG00000025953) #30	AP3B1 (ENSSHAG00000017224) #31	SCAMP1 (ENSSHAG00000016943) #33	LHFPL2 (ENSSHAG00000028883) #34	ARSB (ENSSHAG00000015401) #36	DMGDH (ENSSHAG00000014992) #37	BHMT2 (ENSSHAG00000014959)	BHMT (ENSSHAG00000014860)
Opossum	MODERN SPECIES	2	LHFPL2 (ENSMODG00000019730) #34	SCAMP1 (ENSMODG00000019731) #33	AP3B1 (ENSMODG00000019733) #31	ENSMODG00000050949	ENSMODG00000050562 #30	OTP (ENSMODG00000019736) #29	WDR41 (ENSMODG00000019738) #28	PDE8B (ENSMODG00000019740) #27	ENSMODG00000044321	ENSMODG00000025309	AGGF1 (ENSMODG00000019743) #25	CRHBP (ENSMODG00000019745) #24	S100Z (ENSMODG00000019747) #23	ENSMODG00000013568 #20	F2RL2 (ENSMODG00000036999) #19	F2R (ENSMODG00000013575) #21	ENSMODG00000038124	F2RL1 (ENSMODG00000013578) #22	PHAX (ENSMODG00000000986)	ALDH7A1 (ENSMODG00000001001)	GRAMD2B (ENSMODG00000001027)	ENSMODG00000044426	ZNF608 (ENSMODG00000001045)	ENSMODG00000027439	ENSMODG00000001216	GADD45G (ENSMODG00000001225)	ENSMODG00000001247	ENSMODG00000001250	MAN2A1 (ENSMODG00000001310)	ENSMODG00000038325	ENSMODG00000001327
Platypus	MODERN SPECIES		ARHGEF28 (ENSOANG00000015779)	ENC1 (ENSOANG00000015778)	HEXB (ENSOANG00000015777)	ENSOANG00000015776	NSA2 (ENSOANG00000015775) #7	GCNT4 (ENSOANG00000015773) #10	ENSOANG00000020639 #11	HMGCR (ENSOANG00000014109) #12	CERT1 (ENSOANG00000015771) #13	POLK (ENSOANG00000015770) #14	ENSOANG00000040574	POC5 (ENSOANG00000015769) #16	SV2C (ENSOANG00000015768) #18	IQGAP2 (ENSOANG00000015766) #20	F2RL2 (ENSOANG00000015767) #19	F2R (ENSOANG00000039957) #21	S100Z (ENSOANG00000015763) #23	CRHBP (ENSOANG00000031473) #24	AGGF1 (ENSOANG00000015762) #25	ENSOANG00000015761	PDE8B (ENSOANG00000003104) #27	WDR41 (ENSOANG00000003103) #28	OTP (ENSOANG00000039355) #29	ENSOANG00000036619	AP3B1 (ENSOANG00000003100) #31	SCAMP1 (ENSOANG00000045234) #33	LHFPL2 (ENSOANG00000037815) #34	ARSB (ENSOANG00000007901) #36	DMGDH (ENSOANG00000007898) #37	ENSOANG00000007895	JMY (ENSOANG00000007892)
Sauria	ANCESTRAL SPECIES	5	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Archosauria	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Aves	ANCESTRAL SPECIES	4	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Neognathae	ANCESTRAL SPECIES	12	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.a #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01070000257240	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Japanese quail	MODERN SPECIES	699	NSA2 (ENSCJPG00005001870) #7	FAM169A (ENSCJPG00005001857) #9	GCNT4 (ENSCJPG00005001847) #10	ENSCJPG00005001841 #11	ENSCJPG00005001833 #11	HMGCR (ENSCJPG00005001819) #12	MED18 (ENSCJPG00005001817)	CERT1 (ENSCJPG00005001805) #13	POLK (ENSCJPG00005001795) #14	ANKDD1B (ENSCJPG00005001790) #15	ENSCJPG00005001786	SV2C (ENSCJPG00005001780) #18	ENSCJPG00005001778	F2RL2 (ENSCJPG00005001776) #19	IQGAP2 (ENSCJPG00005001735) #20	F2R (ENSCJPG00005001719) #21	CWC27 (ENSCJPG00005001716)	SREK1IP1 (ENSCJPG00005001713)	RGS7BP (ENSCJPG00005001710)	RNF180 (ENSCJPG00005001700)	HTR1A (ENSCJPG00005001694)	IPO11 (ENSCJPG00005001681)	DIMT1 (ENSCJPG00005001670)	KIF2A (ENSCJPG00005001655)	ZSWIM6 (ENSCJPG00005001619)	ENSCJPG00005001594	NDUFAF2 (ENSCJPG00005001587)	ERCC8 (ENSCJPG00005001577)	ELOVL7 (ENSCJPG00005001566)	DEPDC1B (ENSCJPG00005001561)	PDE4D (ENSCJPG00005001531)
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618.a #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01070000257240	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Chicken	MODERN SPECIES	131	GFM2 (ENSGALG00010010733)	NSA2 (ENSGALG00010010713) #7	FAM169A (ENSGALG00010010625) #9	GCNT4 (ENSGALG00010011128) #10	ENSGALG00010011059 #11	HMGCR (ENSGALG00010011029) #12	MED18 (ENSGALG00010010990)	CERT1 (ENSGALG00010010985) #13	POLK (ENSGALG00010010980) #14	ANKDD1B (ENSGALG00010010962) #15	ENSGALG00010010951	SV2C (ENSGALG00010011403) #18	ENSGALG00010011395	F2RL2 (ENSGALG00010010783) #19	IQGAP2 (ENSGALG00010010688) #20	F2RL1 (ENSGALG00010010599) #21	S100Z (ENSGALG00010011454) #23	CRHBP (ENSGALG00010011451) #24	AGGF1 (ENSGALG00010010457) #25	PDE8B (ENSGALG00010010275) #27	WDR41 (ENSGALG00010010254) #28	OTP (ENSGALG00010011364) #29	TBCA (ENSGALG00010012795)	AP3B1 (ENSGALG00010012751) #31	SCAMP1 (ENSGALG00010012667) #33	LHFPL2 (ENSGALG00010012614) #34	ARSB (ENSGALG00010013306) #36	DMGDH (ENSGALG00010012599) #37	ENSGALG00010012555	JMY (ENSGALG00010012535)	HOMER1 (ENSGALG00010012521)
Turkey	MODERN SPECIES	1299	ENSMGAG00000005446 #7	FAM169A (ENSMGAG00000003916) #9	ENSMGAG00000021702	ENSMGAG00000001400	ENSMGAG00000022603	ENSMGAG00000022393 #11	ENSMGAG00000017664	ENSMGAG00000014911 #13	ENSMGAG00000004910	ENSMGAG00000017860 #14	ENSMGAG00000002014 #14	ENSMGAG00000022885 #13	SV2C (ENSMGAG00000004851) #18	F2RL2 (ENSMGAG00000016024) #19	IQGAP2 (ENSMGAG00000004823) #20	F2R (ENSMGAG00000020653) #21	F2RL1 (ENSMGAG00000016031) #22	S100Z (ENSMGAG00000020183) #23	CRHBP (ENSMGAG00000018504) #24	AGGF1 (ENSMGAG00000004796) #25	PDE8B (ENSMGAG00000004773) #27	WDR41 (ENSMGAG00000004765) #28	ENSMGAG00000019777	AP3B1 (ENSMGAG00000016635) #31	ENSMGAG00000018452 #33	LHFPL2 (ENSMGAG00000004731) #34	ENSMGAG00000009256	ARSB (ENSMGAG00000018561) #36	HOMER1 (ENSMGAG00000020868)	TENT2 (ENSMGAG00000017305)	ENSMGAG00000018641
Anatidae	ANCESTRAL SPECIES	20	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00960000189505	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Pink-footed goose	MODERN SPECIES	183	GFM2 (ENSABRG00000000353)	NSA2 (ENSABRG00000000420) #7	FAM169A (ENSABRG00000000439) #9	GCNT4 (ENSABRG00000000468) #10	ENSABRG00000000482 #11	HMGCR (ENSABRG00000000510) #12	MED18 (ENSABRG00000000557)	CERT1 (ENSABRG00000000564) #13	POLK (ENSABRG00000002261) #14	ANKDD1B (ENSABRG00000002279) #15	ENSABRG00000002309	SV2C (ENSABRG00000002343) #18	IQGAP2 (ENSABRG00000003611) #20	F2RL2 (ENSABRG00000014500) #19	F2RL1 (ENSABRG00000014503) #22	F2R (ENSABRG00000014507) #21
Duck	MODERN SPECIES	4281	GFM2 (ENSAPLG00000007221)	NSA2 (ENSAPLG00000007082) #7	FAM169A (ENSAPLG00000006999) #9	GCNT4 (ENSAPLG00000018100) #10	ENSAPLG00000006971 #11	HMGCR (ENSAPLG00000006209) #12	MED18 (ENSAPLG00000006194)	CERT1 (ENSAPLG00000005669) #13	POLK (ENSAPLG00000005033) #14	ANKDD1B (ENSAPLG00000004990) #15	ENSAPLG00000004910	ENSAPLG00000021753	SV2C (ENSAPLG00000004492) #18	F2RL2 (ENSAPLG00000004486) #19	IQGAP2 (ENSAPLG00000002992) #20	F2R (ENSAPLG00000001030) #21	F2RL1 (ENSAPLG00000028669) #22	S100Z (ENSAPLG00000002758) #23	CRHBP (ENSAPLG00000002564) #24	AGGF1 (ENSAPLG00000001528) #25	ENSAPLG00000027714	PDE8B (ENSAPLG00000007395) #27	WDR41 (ENSAPLG00000007656) #28	ENSAPLG00000027407	ENSAPLG00000023605	AP3B1 (ENSAPLG00000013675) #31	ENSAPLG00000016508	SCAMP1 (ENSAPLG00000030262) #33	LHFPL2 (ENSAPLG00000018490) #34	ARSB (ENSAPLG00000009330) #36	DMGDH (ENSAPLG00000008567) #37
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Great tit	MODERN SPECIES	642	HEXB (ENSPMJG00000016166)	GFM2 (ENSPMJG00000016165)	NSA2 (ENSPMJG00000016164) #7	FAM169A (ENSPMJG00000016163) #9	GCNT4 (ENSPMJG00000016162) #10	ENSPMJG00000016161 #11	HMGCR (ENSPMJG00000016159) #12	MED18 (ENSPMJG00000016158)	CERT1 (ENSPMJG00000016157) #13	ENSPMJG00000016156	POLK (ENSPMJG00000016155) #14	ENSPMJG00000016154	SV2C (ENSPMJG00000016153) #18	F2RL2 (ENSPMJG00000016152) #19	IQGAP2 (ENSPMJG00000016151) #20	F2R (ENSPMJG00000016150) #21	F2RL1 (ENSPMJG00000016149) #22	S100Z (ENSPMJG00000016148) #23	CRHBP (ENSPMJG00000016147) #24	PDE8B (ENSPMJG00000016145) #27	AGGF1 (ENSPMJG00000016144) #25	WDR41 (ENSPMJG00000016143) #28	OTP (ENSPMJG00000016142) #29	TBCA (ENSPMJG00000016141) #30	AP3B1 (ENSPMJG00000016140) #31	SCAMP1 (ENSPMJG00000016139) #33	LHFPL2 (ENSPMJG00000016138) #34	ARSB (ENSPMJG00000016137) #36	DMGDH (ENSPMJG00000016136) #37	ENSPMJG00000016135	JMY (ENSPMJG00000016134)
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.a.a #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Medium ground finch	MODERN SPECIES	143													SV2C (ENSGFOG00000011368) #18	F2RL2 (ENSGFOG00000011362) #19	IQGAP2 (ENSGFOG00000010045) #20	F2R (ENSGFOG00000009977) #21	F2RL1 (ENSGFOG00000009974) #22	S100Z (ENSGFOG00000009967) #23	CRHBP (ENSGFOG00000009960) #24	AGGF1 (ENSGFOG00000009755) #25	PDE8B (ENSGFOG00000009122) #27	WDR41 (ENSGFOG00000009104) #28	ENSGFOG00000009093	AP3B1 (ENSGFOG00000009046) #31	ENSGFOG00000009028 #33	LHFPL2 (ENSGFOG00000009025) #34	ARSB (ENSGFOG00000009010) #36	DMGDH (ENSGFOG00000008906) #37	ENSGFOG00000008891	JMY (ENSGFOG00000008880)	HOMER1 (ENSGFOG00000008874)
Passeroidea	ANCESTRAL SPECIES	23	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b.k #13	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000157603 #31
Common canary	MODERN SPECIES	25	HEXB (ENSSCAG00000004782)	GFM2 (ENSSCAG00000004828)	NSA2 (ENSSCAG00000004842) #7	FAM169A (ENSSCAG00000004849) #9	ENSSCAG00000004859	GCNT4 (ENSSCAG00000004865) #10	ENSSCAG00000004870 #11	HMGCR (ENSSCAG00000004885) #12	ENSSCAG00000004892 #13	POLK (ENSSCAG00000004901) #14	ANKDD1B (ENSSCAG00000004916) #15	ENSSCAG00000004934	SV2C (ENSSCAG00000004946) #18	IQGAP2 (ENSSCAG00000004970) #20	F2RL2 (ENSSCAG00000005003) #19	F2R (ENSSCAG00000005008) #21	F2RL1 (ENSSCAG00000005013) #22	S100Z (ENSSCAG00000005020) #23	CRHBP (ENSSCAG00000005029) #24	AGGF1 (ENSSCAG00000005040) #25	PDE8B (ENSSCAG00000005086) #27	WDR41 (ENSSCAG00000005134) #28	TBCA (ENSSCAG00000005139) #30	AP3B1 (ENSSCAG00000005147) #31	MTX3 (ENSSCAG00000005156)	ENSSCAG00000005348	SERINC5 (ENSSCAG00000006465)	CDK7 (ENSSCAG00000006471)	ENSSCAG00000006477	CENPH (ENSSCAG00000006479)	SLC30A5 (ENSSCAG00000006486)
Flycatcher	MODERN SPECIES	561	HEXB (ENSFALG00000010162)	GFM2 (ENSFALG00000010106)	NSA2 (ENSFALG00000010090) #7	FAM169A (ENSFALG00000027800) #9	ENSFALG00000026352	GCNT4 (ENSFALG00000014564) #10	ENSFALG00000028313	HMGCR (ENSFALG00000010078) #12	ENSFALG00000014553	CERT1 (ENSFALG00000010073) #13	POLK (ENSFALG00000010061) #14	ENSFALG00000010043	SV2C (ENSFALG00000010041) #18	F2RL2 (ENSFALG00000026321) #19	IQGAP2 (ENSFALG00000010034) #20	F2R (ENSFALG00000010030) #21	F2RL1 (ENSFALG00000014541) #22	S100Z (ENSFALG00000028933) #23	CRHBP (ENSFALG00000010024) #24	AGGF1 (ENSFALG00000010018) #25	PDE8B (ENSFALG00000010015) #27	WDR41 (ENSFALG00000010010) #28	TBCA (ENSFALG00000027625) #30	AP3B1 (ENSFALG00000009993) #31	SCAMP1 (ENSFALG00000009973) #33	LHFPL2 (ENSFALG00000025830) #34	ARSB (ENSFALG00000027321) #36	DMGDH (ENSFALG00000009949) #37	ENSFALG00000026736	JMY (ENSFALG00000009914)	HOMER1 (ENSFALG00000009906)
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b.l.a #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310.b #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Kakapo	MODERN SPECIES	19	HEXB (ENSSHBG00005020711)	GFM2 (ENSSHBG00005020784)	NSA2 (ENSSHBG00005021010) #7	ENSSHBG00005021012 #9	GCNT4 (ENSSHBG00005000099) #10	ENSSHBG00005000109 #11	HMGCR (ENSSHBG00005000137) #12	MED18 (ENSSHBG00005000150)	ENSSHBG00005010064 #13	POLK (ENSSHBG00005010150) #14	ANKDD1B (ENSSHBG00005010251) #15	ENSSHBG00005010286	SV2C (ENSSHBG00005010367) #18	IQGAP2 (ENSSHBG00005010448) #20	F2RL2 (ENSSHBG00005010691) #19	F2R (ENSSHBG00005010723) #21	F2RL1 (ENSSHBG00005010738) #22	S100Z (ENSSHBG00005010751) #23	CRHBP (ENSSHBG00005010788) #24	AGGF1 (ENSSHBG00005010807) #25	PDE8B (ENSSHBG00005010892) #27	WDR41 (ENSSHBG00005011087) #28	OTP (ENSSHBG00005011114) #29	TBCA (ENSSHBG00005011141) #30	AP3B1 (ENSSHBG00005011362) #31	SCAMP1 (ENSSHBG00005012135) #33	LHFPL2 (ENSSHBG00005012173) #34	ARSB (ENSSHBG00005012188) #36	DMGDH (ENSSHBG00005012214) #37	ENSSHBG00005012228	ENSSHBG00005012252
Golden eagle	MODERN SPECIES	91	HEXB (ENSACCG00020010543)	GFM2 (ENSACCG00020010560)	NSA2 (ENSACCG00020010586) #7	FAM169A (ENSACCG00020010593) #9	GCNT4 (ENSACCG00020010610) #10	ENSACCG00020010622 #11	HMGCR (ENSACCG00020010636) #12	MED18 (ENSACCG00020010650)	CERT1 (ENSACCG00020010683) #13	POLK (ENSACCG00020010794) #14	ANKDD1B (ENSACCG00020010842) #15	ENSACCG00020010857	SV2C (ENSACCG00020010876) #18	IQGAP2 (ENSACCG00020010944) #20	F2RL2 (ENSACCG00020011007) #19	F2R (ENSACCG00020011014) #21	F2RL1 (ENSACCG00020011018) #22	S100Z (ENSACCG00020011028) #23	CRHBP (ENSACCG00020011040) #24	AGGF1 (ENSACCG00020011059) #25	PDE8B (ENSACCG00020011101) #27	WDR41 (ENSACCG00020011137) #28	OTP (ENSACCG00020011154) #29	TBCA (ENSACCG00020011162) #30	AP3B1 (ENSACCG00020011192) #31	SCAMP1 (ENSACCG00020011232) #33	LHFPL2 (ENSACCG00020011242) #34	ARSB (ENSACCG00020011260) #36	DMGDH (ENSACCG00020011281) #37	ENSACCG00020011296	JMY (ENSACCG00020011307)
African ostrich	MODERN SPECIES	1070	ARHGEF28 (ENSSCUG00000018975)	ENC1 (ENSSCUG00000018980)	HEXB (ENSSCUG00000018982)	GFM2 (ENSSCUG00000018983)	NSA2 (ENSSCUG00000018985) #7	FAM169A (ENSSCUG00000018986) #9	GCNT4 (ENSSCUG00000018988) #10	ENSSCUG00000018991 #11	HMGCR (ENSSCUG00000018992) #12	MED18 (ENSSCUG00000018993)	CERT1 (ENSSCUG00000018994) #13	POLK (ENSSCUG00000018995) #14	ENSSCUG00000018996	IQGAP2 (ENSSCUG00000012832) #20	F2RL2 (ENSSCUG00000012855) #19	F2R (ENSSCUG00000012856) #21	F2RL1 (ENSSCUG00000012858) #22	S100Z (ENSSCUG00000012861) #23	CRHBP (ENSSCUG00000012866) #24	AGGF1 (ENSSCUG00000012874) #25	PDE8B (ENSSCUG00000012877) #27	WDR41 (ENSSCUG00000012878) #28	TBCA (ENSSCUG00000012882) #30	ENSSCUG00000012883	AP3B1 (ENSSCUG00000012886) #31	SCAMP1 (ENSSCUG00000012902) #33	LHFPL2 (ENSSCUG00000012905) #34	ARSB (ENSSCUG00000012909) #36	DMGDH (ENSSCUG00000012911) #37	ENSSCUG00000012912	JMY (ENSSCUG00000012913)
Australian saltwater crocodile	MODERN SPECIES	29	FAM169A (ENSCPRG00005000616) #9	GCNT4 (ENSCPRG00005000608) #10	ENSCPRG00005000598	HMGCR (ENSCPRG00005000561) #12	MED18 (ENSCPRG00005000551)	CERT1 (ENSCPRG00005000523) #13	POLK (ENSCPRG00005000468) #14	ANKDD1B (ENSCPRG00005000445) #15	ENSCPRG00005000427	ENSCPRG00005000416	ENSCPRG00005000401	SV2C (ENSCPRG00005000334) #18	ENSCPRG00005000328	F2RL2 (ENSCPRG00005000293) #19	IQGAP2 (ENSCPRG00005000163) #20	F2R (ENSCPRG00005000123) #21	F2RL1 (ENSCPRG00005000107) #22	S100Z (ENSCPRG00005017455) #23	CRHBP (ENSCPRG00005017451) #24	AGGF1 (ENSCPRG00005017448) #25	PDE8B (ENSCPRG00005017420) #27	WDR41 (ENSCPRG00005017397) #28	OTP (ENSCPRG00005017395) #29	TBCA (ENSCPRG00005017393) #30	AP3B1 (ENSCPRG00005017376) #31	SCAMP1 (ENSCPRG00005017372) #33	LHFPL2 (ENSCPRG00005017371) #34	ARSB (ENSCPRG00005017367) #36	DMGDH (ENSCPRG00005017362) #37	ENSCPRG00005017356	JMY (ENSCPRG00005017344)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Goode s thornscrub tortoise	MODERN SPECIES	20	GFM2 (ENSGEVG00005002461)	NSA2 (ENSGEVG00005002481) #7	FAM169A (ENSGEVG00005002497) #9	GCNT4 (ENSGEVG00005002526) #10	ENSGEVG00005002534 #11	HMGCR (ENSGEVG00005002550) #12	MED18 (ENSGEVG00005002570)	CERT1 (ENSGEVG00005002596) #13	POLK (ENSGEVG00005002673) #14	ANKDD1B (ENSGEVG00005002744) #15	ENSGEVG00005002779	SV2C (ENSGEVG00005002796) #18	ENSGEVG00005002861	IQGAP2 (ENSGEVG00005004397) #20	F2RL2 (ENSGEVG00005017004) #19	F2R (ENSGEVG00005017019) #21	F2RL1 (ENSGEVG00005017035) #22	S100Z (ENSGEVG00005017053) #23	CRHBP (ENSGEVG00005017082) #24	AGGF1 (ENSGEVG00005017135) #25	PDE8B (ENSGEVG00005017191) #27	WDR41 (ENSGEVG00005017322) #28	OTP (ENSGEVG00005017397) #29	TBCA (ENSGEVG00005017424) #30	AP3B1 (ENSGEVG00005017453) #31	SCAMP1 (ENSGEVG00005017551) #33	LHFPL2 (ENSGEVG00005017571) #34	ARSB (ENSGEVG00005017597) #36	DMGDH (ENSGEVG00005017878) #37	ENSGEVG00005019199	JMY (ENSGEVG00005019239)
Abingdon island giant tortoise	MODERN SPECIES	25													SV2C (ENSCABG00000012314) #18	IQGAP2 (ENSCABG00000012321) #20	F2RL2 (ENSCABG00000012438) #19	F2R (ENSCABG00000012440) #21	F2RL1 (ENSCABG00000012443) #22	S100Z (ENSCABG00000012444) #23
Emydidae	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00390000003312	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00990000214262	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Three-toed box turtle	MODERN SPECIES	29	NSA2 (ENSTMTG00000010889) #7	FAM169A (ENSTMTG00000010844) #9	GCNT4 (ENSTMTG00000010834) #10	ENSTMTG00000010801 #11	HMGCR (ENSTMTG00000010742) #12	MED18 (ENSTMTG00000010732)	CERT1 (ENSTMTG00000010650) #13	POLK (ENSTMTG00000010623) #14	ANKDD1B (ENSTMTG00000010565) #15	ENSTMTG00000010543	ENSTMTG00000010519	SV2C (ENSTMTG00000010477) #18	ENSTMTG00000010456	F2RL2 (ENSTMTG00000010445) #19	IQGAP2 (ENSTMTG00000010288) #20	F2R (ENSTMTG00000010274) #21	F2RL1 (ENSTMTG00000010266) #22	S100Z (ENSTMTG00000010247) #23	CRHBP (ENSTMTG00000010221) #24	AGGF1 (ENSTMTG00000010202) #25	PDE8B (ENSTMTG00000010141) #27	WDR41 (ENSTMTG00000010122) #28	OTP (ENSTMTG00000019954) #29	TBCA (ENSTMTG00000019947) #30	AP3B1 (ENSTMTG00000019939) #31	SCAMP1 (ENSTMTG00000019932) #33	LHFPL2 (ENSTMTG00000019928) #34	ARSB (ENSTMTG00000019924) #36	DMGDH (ENSTMTG00000019910) #37	ENSTMTG00000019899	JMY (ENSTMTG00000019893)
painted turtle	MODERN SPECIES	695	GFM2 (ENSCPBG00000000761)	NSA2 (ENSCPBG00000000845) #7	FAM169A (ENSCPBG00000000858) #9	GCNT4 (ENSCPBG00000000877) #10	ENSCPBG00000000893 #11	HMGCR (ENSCPBG00000000934) #12	MED18 (ENSCPBG00000000959)	CERT1 (ENSCPBG00000000976) #13	POLK (ENSCPBG00000001045) #14	ANKDD1B (ENSCPBG00000001071) #15	ENSCPBG00000001139	SV2C (ENSCPBG00000001171) #18	ENSCPBG00000001231 #20	F2RL2 (ENSCPBG00000001709) #19	ENSCPBG00000001716 #20	F2R (ENSCPBG00000001721) #21	F2RL1 (ENSCPBG00000001729) #22	S100Z (ENSCPBG00000001741) #23	CRHBP (ENSCPBG00000001749) #24	AGGF1 (ENSCPBG00000001764) #25	PDE8B (ENSCPBG00000001910) #27	WDR41 (ENSCPBG00000004211) #28	OTP (ENSCPBG00000004217) #29	TBCA (ENSCPBG00000004229) #30	AP3B1 (ENSCPBG00000004265) #31
Chinese turtle	MODERN SPECIES	769														ENSPSIG00000012702 #20	F2RL2 (ENSPSIG00000000934) #19	F2R (ENSPSIG00000013235) #21	F2RL1 (ENSPSIG00000000941) #22	S100Z (ENSPSIG00000013240) #23	CRHBP (ENSPSIG00000013255) #24	AGGF1 (ENSPSIG00000014397) #25	PDE8B (ENSPSIG00000014953) #27	WDR41 (ENSPSIG00000015621) #28	OTP (ENSPSIG00000015830) #29	TBCA (ENSPSIG00000015832) #30	AP3B1 (ENSPSIG00000015957) #31	SCAMP1 (ENSPSIG00000005353) #33	LHFPL2 (ENSPSIG00000006003) #34	ARSB (ENSPSIG00000006010) #36	ENSPSIG00000000958	DMGDH (ENSPSIG00000006338) #37	ENSPSIG00000006482
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Episquamata	DUPLICATION
Episquamata	ANCESTRAL SPECIES	6	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Laterata	ANCESTRAL SPECIES	8	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Common wall lizard	MODERN SPECIES	2	GFM2 (ENSPMRG00000017136)	ENSPMRG00000017122 #7	FAM169A (ENSPMRG00000017115) #9	ENSPMRG00000017111	GCNT4 (ENSPMRG00000017109) #10	HMGCR (ENSPMRG00000017104) #12	CERT1 (ENSPMRG00000017088) #13	ENSPMRG00000017083	POLK (ENSPMRG00000017080) #14	ANKDD1B (ENSPMRG00000017071) #15	ENSPMRG00000017062	SV2C (ENSPMRG00000017039) #18	F2RL2 (ENSPMRG00000017024) #19	IQGAP2 (ENSPMRG00000016986) #20	ENSPMRG00000016977	ENSPMRG00000016973 #21	ENSPMRG00000016969 #21	ENSPMRG00000016964 #21	ENSPMRG00000016958 #21	F2RL1 (ENSPMRG00000016949) #22	S100Z (ENSPMRG00000016943) #23	CRHBP (ENSPMRG00000016936) #24	AGGF1 (ENSPMRG00000016929) #25	PDE8B (ENSPMRG00000016915) #27	WDR41 (ENSPMRG00000016907) #28	OTP (ENSPMRG00000016904) #29	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016887	ENSPMRG00000016877 #31	ENSPMRG00000016558 #31
Argentine black and white tegu	MODERN SPECIES	10	ENC1 (ENSSMRG00000005874)	HEXB (ENSSMRG00000005873)	GFM2 (ENSSMRG00000005872)	NSA2 (ENSSMRG00000005871) #7	FAM169A (ENSSMRG00000005843) #9	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Eastern brown snake	MODERN SPECIES	2	ENSPTXG00000002702	ENC1 (ENSPTXG00000002701)	HEXB (ENSPTXG00000002700)	GFM2 (ENSPTXG00000002694)	NSA2 (ENSPTXG00000002688) #7	FAM169A (ENSPTXG00000002682) #9	GCNT4 (ENSPTXG00000002679) #10	HMGCR (ENSPTXG00000002673) #12	CERT1 (ENSPTXG00000002617) #13	POLK (ENSPTXG00000002608) #14	ANKDD1B (ENSPTXG00000002606) #15	ENSPTXG00000002603	SV2C (ENSPTXG00000002599) #18	F2RL2 (ENSPTXG00000002598) #19	IQGAP2 (ENSPTXG00000002592) #20	ENSPTXG00000002587 #21	ENSPTXG00000002586 #21	F2RL1 (ENSPTXG00000002584) #22	S100Z (ENSPTXG00000002582) #23	CRHBP (ENSPTXG00000002580) #24	AGGF1 (ENSPTXG00000002575) #25	PDE8B (ENSPTXG00000002569) #27	WDR41 (ENSPTXG00000002565) #28	OTP (ENSPTXG00000002560) #29	TBCA (ENSPTXG00000002558) #30	AP3B1 (ENSPTXG00000002552) #31	SCAMP1 (ENSPTXG00000002548) #33	LHFPL2 (ENSPTXG00000002546) #34	ARSB (ENSPTXG00000002543) #36	DMGDH (ENSPTXG00000002538) #37	ENSPTXG00000002535
Mainland tiger snake	MODERN SPECIES	33	ARHGEF28 (ENSNSUG00000010843)	ENC1 (ENSNSUG00000010842)	HEXB (ENSNSUG00000010836)	GFM2 (ENSNSUG00000010550)	NSA2 (ENSNSUG00000010546) #7	FAM169A (ENSNSUG00000010538) #9	GCNT4 (ENSNSUG00000010536) #10	HMGCR (ENSNSUG00000010526) #12	CERT1 (ENSNSUG00000010520) #13	POLK (ENSNSUG00000010513) #14	ANKDD1B (ENSNSUG00000010511) #15	ENSNSUG00000010508	SV2C (ENSNSUG00000010481) #18	F2RL2 (ENSNSUG00000010480) #19	IQGAP2 (ENSNSUG00000008168) #20	ENSNSUG00000008166 #21	ENSNSUG00000008165 #21	F2RL1 (ENSNSUG00000008164) #22	S100Z (ENSNSUG00000008153) #23	CRHBP (ENSNSUG00000008150) #24	AGGF1 (ENSNSUG00000008042) #25	PDE8B (ENSNSUG00000007470) #27	ENSNSUG00000007467 #28	OTP (ENSNSUG00000007466) #29	ENSNSUG00000007432 #30	AP3B1 (ENSNSUG00000007370) #31	SCAMP1 (ENSNSUG00000007366) #33	LHFPL2 (ENSNSUG00000007360) #34	ARSB (ENSNSUG00000007357) #36	DMGDH (ENSNSUG00000007356) #37	ENSNSUG00000007351
Blue-lipped sea krait	MODERN SPECIES	5972															ENSLLTG00000005145 #20	ENSLLTG00000005118 #21	ENSLLTG00000005095 #21
Indian cobra	MODERN SPECIES	1	HEXB (ENSNNAG00000003401)	GFM2 (ENSNNAG00000003664)	NSA2 (ENSNNAG00000006166) #7	FAM169A (ENSNNAG00000006185) #9	GCNT4 (ENSNNAG00000006323) #10	HMGCR (ENSNNAG00000006352) #12	CERT1 (ENSNNAG00000006429) #13	POLK (ENSNNAG00000006564) #14	ANKDD1B (ENSNNAG00000006589) #15	ENSNNAG00000006634	SV2C (ENSNNAG00000006660) #18	ENSNNAG00000006703 ##20	ENSNNAG00000006718	F2RL2 (ENSNNAG00000006742) #19	IQGAP2 (ENSNNAG00000006766) #20	ENSNNAG00000003737 #21	ENSNNAG00000003747 #21	F2RL1 (ENSNNAG00000003782) #22	S100Z (ENSNNAG00000003790) #23	CRHBP (ENSNNAG00000003821) #24	AGGF1 (ENSNNAG00000003959) #25	ENSNNAG00000004588	PDE8B (ENSNNAG00000004615) #27	WDR41 (ENSNNAG00000004669) #28	OTP (ENSNNAG00000004735) #29	TBCA (ENSNNAG00000004751) #30	AP3B1 (ENSNNAG00000004770) #31	SCAMP1 (ENSNNAG00000004867) #33	LHFPL2 (ENSNNAG00000004879) #34	ENSNNAG00000004894 #36	ENSNNAG00000004946 #36
Lizard	MODERN SPECIES	1	GCNT4 (ENSACAG00000008942) #10	ENSACAG00000038096	ENSACAG00000041697	HMGCR (ENSACAG00000008698) #12	CERT1 (ENSACAG00000008556) #13	POLK (ENSACAG00000008458) #14	ANKDD1B (ENSACAG00000008414) #15	ENSACAG00000022708	ENSACAG00000008393	SV2C (ENSACAG00000008315) #18	ENSACAG00000043111	ENSACAG00000035710	ENSACAG00000041042	F2RL2 (ENSACAG00000008312) #19	IQGAP2 (ENSACAG00000007992) #20	ENSACAG00000037432 #21	ENSACAG00000037420 #21	F2RL1 (ENSACAG00000007980) #22	S100Z (ENSACAG00000036691) #23	CRHBP (ENSACAG00000007916) #24	AGGF1 (ENSACAG00000007847) #25	PDE8B (ENSACAG00000007748) #27	WDR41 (ENSACAG00000007717) #28	OTP (ENSACAG00000030602) #29	tbca (ENSACAG00000035436) #30	AP3B1 (ENSACAG00000007430) #31	SCAMP1 (ENSACAG00000012476) #33	LHFPL2 (ENSACAG00000012574) #34	ENSACAG00000040664	ARSB (ENSACAG00000016838) #36	DMGDH (ENSACAG00000016799) #37
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Laterata	ANCESTRAL SPECIES	8	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000162618 #11	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00940000170540	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Common wall lizard	DUPLICATION
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000017111	GCNT4 (ENSPMRG00000017109) #10	HMGCR (ENSPMRG00000017104) #12	CERT1 (ENSPMRG00000017088) #13	ENSPMRG00000017083	POLK (ENSPMRG00000017080) #14	ANKDD1B (ENSPMRG00000017071) #15	ENSPMRG00000017062	SV2C (ENSPMRG00000017039) #18	F2RL2 (ENSPMRG00000017024) #19	IQGAP2 (ENSPMRG00000016986) #20	ENSPMRG00000016977	ENSPMRG00000016973 #21	ENSPMRG00000016969 #21	ENSPMRG00000016964 #21	ENSPMRG00000016958 #21	F2RL1 (ENSPMRG00000016949) #22	S100Z (ENSPMRG00000016943) #23	CRHBP (ENSPMRG00000016936) #24	AGGF1 (ENSPMRG00000016929) #25	PDE8B (ENSPMRG00000016915) #27	WDR41 (ENSPMRG00000016907) #28	OTP (ENSPMRG00000016904) #29	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016887	ENSPMRG00000016877 #31	ENSPMRG00000016558 #31	SCAMP1 (ENSPMRG00000016489) #33	ENSPMRG00000016483	LHFPL2 (ENSPMRG00000016477) #34
Common wall lizard	MODERN SPECIES	2	FAM169A (ENSPMRG00000017115) #9	ENSPMRG00000017111	GCNT4 (ENSPMRG00000017109) #10	HMGCR (ENSPMRG00000017104) #12	CERT1 (ENSPMRG00000017088) #13	ENSPMRG00000017083	POLK (ENSPMRG00000017080) #14	ANKDD1B (ENSPMRG00000017071) #15	ENSPMRG00000017062	SV2C (ENSPMRG00000017039) #18	F2RL2 (ENSPMRG00000017024) #19	IQGAP2 (ENSPMRG00000016986) #20	ENSPMRG00000016977	ENSPMRG00000016973 #21	ENSPMRG00000016969 #21	ENSPMRG00000016964 #21	ENSPMRG00000016958 #21	F2RL1 (ENSPMRG00000016949) #22	S100Z (ENSPMRG00000016943) #23	CRHBP (ENSPMRG00000016936) #24	AGGF1 (ENSPMRG00000016929) #25	PDE8B (ENSPMRG00000016915) #27	WDR41 (ENSPMRG00000016907) #28	OTP (ENSPMRG00000016904) #29	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016887	ENSPMRG00000016877 #31	ENSPMRG00000016558 #31	SCAMP1 (ENSPMRG00000016489) #33	ENSPMRG00000016483
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000017122 #7	FAM169A (ENSPMRG00000017115) #9	ENSPMRG00000017111	GCNT4 (ENSPMRG00000017109) #10	HMGCR (ENSPMRG00000017104) #12	CERT1 (ENSPMRG00000017088) #13	ENSPMRG00000017083	POLK (ENSPMRG00000017080) #14	ANKDD1B (ENSPMRG00000017071) #15	ENSPMRG00000017062	SV2C (ENSPMRG00000017039) #18	F2RL2 (ENSPMRG00000017024) #19	IQGAP2 (ENSPMRG00000016986) #20	ENSPMRG00000016977	ENSPMRG00000016973 #21	ENSPMRG00000016969 #21	ENSPMRG00000016964 #21	ENSPMRG00000016958 #21	F2RL1 (ENSPMRG00000016949) #22	S100Z (ENSPMRG00000016943) #23	CRHBP (ENSPMRG00000016936) #24	AGGF1 (ENSPMRG00000016929) #25	PDE8B (ENSPMRG00000016915) #27	WDR41 (ENSPMRG00000016907) #28	OTP (ENSPMRG00000016904) #29	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016887	ENSPMRG00000016877 #31	ENSPMRG00000016558 #31	SCAMP1 (ENSPMRG00000016489) #33
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33	LHFPL2 (ENSSMRG00000002636) #34	ARSB (ENSSMRG00000002586) #36	DMGDH (ENSSMRG00000002569) #37	ENSSMRG00000002563
Argentine black and white tegu	MODERN SPECIES	10	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33	LHFPL2 (ENSSMRG00000002636) #34	ARSB (ENSSMRG00000002586) #36	DMGDH (ENSSMRG00000002569) #37
Argentine black and white tegu	MODERN SPECIES	10	GFM2 (ENSSMRG00000005872)	NSA2 (ENSSMRG00000005871) #7	FAM169A (ENSSMRG00000005843) #9	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	10	FAM169A (ENSSMRG00000005843) #9	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33	LHFPL2 (ENSSMRG00000002636) #34	ARSB (ENSSMRG00000002586) #36
Argentine black and white tegu	MODERN SPECIES	10	NSA2 (ENSSMRG00000005871) #7	FAM169A (ENSSMRG00000005843) #9	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31	SCAMP1 (ENSSMRG00000002646) #33	LHFPL2 (ENSSMRG00000002636) #34
Argentine black and white tegu	MODERN SPECIES	10	HEXB (ENSSMRG00000005873)	GFM2 (ENSSMRG00000005872)	NSA2 (ENSSMRG00000005871) #7	FAM169A (ENSSMRG00000005843) #9	GCNT4 (ENSSMRG00000005771) #10	ENSSMRG00000005770 #11	HMGCR (ENSSMRG00000004085) #12	CERT1 (ENSSMRG00000004058) #13	POLK (ENSSMRG00000004038) #14	ANKDD1B (ENSSMRG00000004024) #15	ENSSMRG00000004013	SV2C (ENSSMRG00000003152) #18	F2RL2 (ENSSMRG00000003145) #19	IQGAP2 (ENSSMRG00000003117) #20	ENSSMRG00000003045 #21	ENSSMRG00000003039 #21	ENSSMRG00000003030 #21	ENSSMRG00000003024 #21	ENSSMRG00000003017 #21	ENSSMRG00000003014 #21	ENSSMRG00000003010 #21	F2RL1 (ENSSMRG00000003003) #22	S100Z (ENSSMRG00000002998) #23	CRHBP (ENSSMRG00000002991) #24	AGGF1 (ENSSMRG00000002967) #25	PDE8B (ENSSMRG00000002916) #27	WDR41 (ENSSMRG00000002897) #28	OTP (ENSSMRG00000002889) #29	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #31
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Elapidae	ANCESTRAL SPECIES	7	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667.g #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b.i #21	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710.fb #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122	ENSGT00510000046704.b.a
Eastern brown snake	MODERN SPECIES	2	ENC1 (ENSPTXG00000002701)	HEXB (ENSPTXG00000002700)	GFM2 (ENSPTXG00000002694)	NSA2 (ENSPTXG00000002688) #7	FAM169A (ENSPTXG00000002682) #9	GCNT4 (ENSPTXG00000002679) #10	HMGCR (ENSPTXG00000002673) #12	CERT1 (ENSPTXG00000002617) #13	POLK (ENSPTXG00000002608) #14	ANKDD1B (ENSPTXG00000002606) #15	ENSPTXG00000002603	SV2C (ENSPTXG00000002599) #18	F2RL2 (ENSPTXG00000002598) #19	IQGAP2 (ENSPTXG00000002592) #20	ENSPTXG00000002587 #21	ENSPTXG00000002586 #21	F2RL1 (ENSPTXG00000002584) #22	S100Z (ENSPTXG00000002582) #23	CRHBP (ENSPTXG00000002580) #24	AGGF1 (ENSPTXG00000002575) #25	PDE8B (ENSPTXG00000002569) #27	WDR41 (ENSPTXG00000002565) #28	OTP (ENSPTXG00000002560) #29	TBCA (ENSPTXG00000002558) #30	AP3B1 (ENSPTXG00000002552) #31	SCAMP1 (ENSPTXG00000002548) #33	LHFPL2 (ENSPTXG00000002546) #34	ARSB (ENSPTXG00000002543) #36	DMGDH (ENSPTXG00000002538) #37	ENSPTXG00000002535	JMY (ENSPTXG00000002530)
Mainland tiger snake	MODERN SPECIES	33	ENC1 (ENSNSUG00000010842)	HEXB (ENSNSUG00000010836)	GFM2 (ENSNSUG00000010550)	NSA2 (ENSNSUG00000010546) #7	FAM169A (ENSNSUG00000010538) #9	GCNT4 (ENSNSUG00000010536) #10	HMGCR (ENSNSUG00000010526) #12	CERT1 (ENSNSUG00000010520) #13	POLK (ENSNSUG00000010513) #14	ANKDD1B (ENSNSUG00000010511) #15	ENSNSUG00000010508	SV2C (ENSNSUG00000010481) #18	F2RL2 (ENSNSUG00000010480) #19	IQGAP2 (ENSNSUG00000008168) #20	ENSNSUG00000008166 #21	ENSNSUG00000008165 #21	F2RL1 (ENSNSUG00000008164) #22	S100Z (ENSNSUG00000008153) #23	CRHBP (ENSNSUG00000008150) #24	AGGF1 (ENSNSUG00000008042) #25	PDE8B (ENSNSUG00000007470) #27	ENSNSUG00000007467 #28	OTP (ENSNSUG00000007466) #29	ENSNSUG00000007432 #30	AP3B1 (ENSNSUG00000007370) #31	SCAMP1 (ENSNSUG00000007366) #33	LHFPL2 (ENSNSUG00000007360) #34	ARSB (ENSNSUG00000007357) #36	DMGDH (ENSNSUG00000007356) #37	ENSNSUG00000007351	JMY (ENSNSUG00000007346)
Blue-lipped sea krait	MODERN SPECIES	5972														ENSLLTG00000005145 #20	ENSLLTG00000005118 #21	ENSLLTG00000005095 #21
Indian cobra	MODERN SPECIES	1	GFM2 (ENSNNAG00000003664)	NSA2 (ENSNNAG00000006166) #7	FAM169A (ENSNNAG00000006185) #9	GCNT4 (ENSNNAG00000006323) #10	HMGCR (ENSNNAG00000006352) #12	CERT1 (ENSNNAG00000006429) #13	POLK (ENSNNAG00000006564) #14	ANKDD1B (ENSNNAG00000006589) #15	ENSNNAG00000006634	SV2C (ENSNNAG00000006660) #18	ENSNNAG00000006703 ##20	ENSNNAG00000006718	F2RL2 (ENSNNAG00000006742) #19	IQGAP2 (ENSNNAG00000006766) #20	ENSNNAG00000003737 #21	ENSNNAG00000003747 #21	F2RL1 (ENSNNAG00000003782) #22	S100Z (ENSNNAG00000003790) #23	CRHBP (ENSNNAG00000003821) #24	AGGF1 (ENSNNAG00000003959) #25	ENSNNAG00000004588	PDE8B (ENSNNAG00000004615) #27	WDR41 (ENSNNAG00000004669) #28	OTP (ENSNNAG00000004735) #29	TBCA (ENSNNAG00000004751) #30	AP3B1 (ENSNNAG00000004770) #31	SCAMP1 (ENSNNAG00000004867) #33	LHFPL2 (ENSNNAG00000004879) #34	ENSNNAG00000004894 #36	ENSNNAG00000004946 #36	DMGDH (ENSNNAG00000004972) #37
Lizard	MODERN SPECIES	1	ENSACAG00000038096	ENSACAG00000041697	HMGCR (ENSACAG00000008698) #12	CERT1 (ENSACAG00000008556) #13	POLK (ENSACAG00000008458) #14	ANKDD1B (ENSACAG00000008414) #15	ENSACAG00000022708	ENSACAG00000008393	SV2C (ENSACAG00000008315) #18	ENSACAG00000043111	ENSACAG00000035710	ENSACAG00000041042	F2RL2 (ENSACAG00000008312) #19	IQGAP2 (ENSACAG00000007992) #20	ENSACAG00000037432 #21	ENSACAG00000037420 #21	F2RL1 (ENSACAG00000007980) #22	S100Z (ENSACAG00000036691) #23	CRHBP (ENSACAG00000007916) #24	AGGF1 (ENSACAG00000007847) #25	PDE8B (ENSACAG00000007748) #27	WDR41 (ENSACAG00000007717) #28	OTP (ENSACAG00000030602) #29	tbca (ENSACAG00000035436) #30	AP3B1 (ENSACAG00000007430) #31	SCAMP1 (ENSACAG00000012476) #33	LHFPL2 (ENSACAG00000012574) #34	ENSACAG00000040664	ARSB (ENSACAG00000016838) #36	DMGDH (ENSACAG00000016799) #37	ENSACAG00000016768
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1540																ENSSPUG00000016211 #21	ENSSPUG00000016204 #21	F2RL1 (ENSSPUG00000016201) #22	S100Z (ENSSPUG00000016188) #23	CRHBP (ENSSPUG00000016153) #24	AGGF1 (ENSSPUG00000016142) #25	PDE8B (ENSSPUG00000015771) #27	WDR41 (ENSSPUG00000015653) #28	OTP (ENSSPUG00000015641) #29	TBCA (ENSSPUG00000015638) #30	AP3B1 (ENSSPUG00000015564) #31
tuatara	MODERN SPECIES	1540															ENSSPUG00000016211 #21	ENSSPUG00000016204 #21	F2RL1 (ENSSPUG00000016201) #22	S100Z (ENSSPUG00000016188) #23	CRHBP (ENSSPUG00000016153) #24	AGGF1 (ENSSPUG00000016142) #25	PDE8B (ENSSPUG00000015771) #27	WDR41 (ENSSPUG00000015653) #28	OTP (ENSSPUG00000015641) #29	TBCA (ENSSPUG00000015638) #30	AP3B1 (ENSSPUG00000015564) #31
Anura	ANCESTRAL SPECIES	9	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706 #7	ENSGT00510000048902.a #9	ENSGT00940000159721 #10	ENSGT00940000170332	ENSGT00940000155305 #12	ENSGT00940000155123.b #13	ENSGT00940000156667 #14	ENSGT00940000154170.A #15	ENSGT00940000164571	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.a.a #22	ENSGT00940000161125 #23	ENSGT00390000001362 #24	ENSGT00730000111121 #25	ENSGT01100000264050	ENSGT00940000157817 #27	ENSGT00390000017026 #28	ENSGT00940000159952 #29	ENSGT00390000009710 #30	ENSGT00940000157603 #31	ENSGT00940000157310 #33	ENSGT00990000203589.b.b #34	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES		CERT1 (ENSLLEG00000022716) #13	ENSLLEG00000022681	ENSLLEG00000022621 #14	ENSLLEG00000022551 #14	ANKDD1B (ENSLLEG00000022314) #15	ENSLLEG00000022196	ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000022621 #14	ENSLLEG00000022551 #14	ANKDD1B (ENSLLEG00000022314) #15	ENSLLEG00000022196	ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355	S100Z (ENSLLEG00000019309) #23	ENSLLEG00000019291
Leishan spiny toad	MODERN SPECIES		ANKDD1B (ENSLLEG00000022314) #15	ENSLLEG00000022196	ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355	S100Z (ENSLLEG00000019309) #23	ENSLLEG00000019291	CRHBP (ENSLLEG00000019109) #24	AGGF1 (ENSLLEG00000018958) #25
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000022196	ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355	S100Z (ENSLLEG00000019309) #23	ENSLLEG00000019291	CRHBP (ENSLLEG00000019109) #24	AGGF1 (ENSLLEG00000018958) #25	ENSLLEG00000018871
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525	ENSLLEG00000019437	ENSLLEG00000019355	S100Z (ENSLLEG00000019309) #23	ENSLLEG00000019291	CRHBP (ENSLLEG00000019109) #24	AGGF1 (ENSLLEG00000018958) #25	ENSLLEG00000018871	ENSLLEG00000018821
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000023779	HMGCR (ENSLLEG00000023306) #12	CERT1 (ENSLLEG00000022716) #13	ENSLLEG00000022681	ENSLLEG00000022621 #14	ENSLLEG00000022551 #14	ANKDD1B (ENSLLEG00000022314) #15	ENSLLEG00000022196	ENSLLEG00000021871	ENSLLEG00000021842	ENSLLEG00000021825	ENSLLEG00000021727 #18	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021667	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021005 #21	ENSLLEG00000020858	ENSLLEG00000020688 #21	ENSLLEG00000020608	ENSLLEG00000020543 #21	ENSLLEG00000020439	ENSLLEG00000020343 #21	ENSLLEG00000020309 #21	ENSLLEG00000020275 #21	ENSLLEG00000020238	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020113	ENSLLEG00000019700	ENSLLEG00000019606	ENSLLEG00000019542	ENSLLEG00000019525
Frog	MODERN SPECIES		enc1 (ENSXETG00000005074)	hexb (ENSXETG00000005075)	gfm2 (ENSXETG00000005076)	nsa2 (ENSXETG00000005077) #7	fam169a (ENSXETG00000031427) #9	gcnt4 (ENSXETG00000005081) #10	ankrd31 (ENSXETG00000048346)	hmgcr (ENSXETG00000005084) #12	cert1 (ENSXETG00000005085) #13	polk (ENSXETG00000005087) #14	ankdd1b (ENSXETG00000032144) #15	poc5 (ENSXETG00000003349)	sv2c (ENSXETG00000030792) #18	iqgap2 (ENSXETG00000003339) #20	f2rl2 (ENSXETG00000003340) #19	f2r (ENSXETG00000003338) #21	ENSXETG00000042651	f2rl1 (ENSXETG00000001420) #22	ENSXETG00000043113	crhbp (ENSXETG00000017080) #24	s100z (ENSXETG00000017078) #23	ENSXETG00000047318	aggf1 (ENSXETG00000017077) #25	pde8b (ENSXETG00000017075) #27	wdr41 (ENSXETG00000017074) #28	otp (ENSXETG00000035719) #29	tbca (ENSXETG00000016574) #30	ap3b1 (ENSXETG00000030391) #31	scamp1 (ENSXETG00000000547) #33	lhfpl2 (ENSXETG00000044028) #34	arsb (ENSXETG00000045303) #36
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	354													SV2C (ENSLACG00000000841) #18	ENSLACG00000007149 ##20	F2RL2 (ENSLACG00000008066) #19	F2R (ENSLACG00000009553) #21	ENSLACG00000022384 #22	ENSLACG00000022473 #22	ENSLACG00000010563 #22	S100Z (ENSLACG00000011069) #23	CRHBP (ENSLACG00000011704) #24	AGGF1 (ENSLACG00000012448) #25	PDE8B (ENSLACG00000014400) #27	WDR41 (ENSLACG00000014972) #28	OTP (ENSLACG00000015564) #29	TBCA (ENSLACG00000015660) #30	AP3B1 (ENSLACG00000016462) #31	SCAMP1 (ENSLACG00000016971) #33	LHFPL2 (ENSLACG00000017142) #34	ARSB (ENSLACG00000017542) #36
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	308										rpl29 (ENSLACG00000018031)	SHCBP1L (ENSLACG00000017885)	DHX9 (ENSLACG00000017767)	ENSLACG00000017666	xpr1b (ENSLACG00000017440)	RASAL2 (ENSLACG00000016068)	ENSLACG00000015834 #21	STX6 (ENSLACG00000015597)	ier5 (ENSLACG00000015495)	ENSLACG00000014476	CACNA1E (ENSLACG00000011809)	ENSLACG00000009861
Coelacanth	MODERN SPECIES	2165																ENSLACG00000003963 #21
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01050000244840.A.b.a ##19
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1549	ENSCMIG00000006033	ENSCMIG00000006036	ENSCMIG00000006039	ENSCMIG00000006040	jund (ENSCMIG00000006046)	lsm4 (ENSCMIG00000006055)	shc2 (ENSCMIG00000006075)	ENSCMIG00000006104	TPGS1 (ENSCMIG00000006107)	sin3b (ENSCMIG00000006128)	ENSCMIG00000006155	ENSCMIG00000006159	ENSCMIG00000006163	ENSCMIG00000006166 #23	S100A1 (ENSCMIG00000006167)	ENSCMIG00000006170 ##19	ENSCMIG00000006176 ##19	uba52 (ENSCMIG00000006182)	ENSCMIG00000006201	kxd1 (ENSCMIG00000006204)	homer3b (ENSCMIG00000006208)	ddx49 (ENSCMIG00000006215)	upf1 (ENSCMIG00000006233)	ENSCMIG00000006370	crtc1a (ENSCMIG00000006701)	klhl26 (ENSCMIG00000006708)	ENSCMIG00000006728	MAST3 (ENSCMIG00000006760)	pik3r2 (ENSCMIG00000006897)	ifi30 (ENSCMIG00000007043)	C2CD4C (ENSCMIG00000007045)
Elephant shark	MODERN SPECIES	1549	ENSCMIG00000006036	ENSCMIG00000006039	ENSCMIG00000006040	jund (ENSCMIG00000006046)	lsm4 (ENSCMIG00000006055)	shc2 (ENSCMIG00000006075)	ENSCMIG00000006104	TPGS1 (ENSCMIG00000006107)	sin3b (ENSCMIG00000006128)	ENSCMIG00000006155	ENSCMIG00000006159	ENSCMIG00000006163	ENSCMIG00000006166 #23	S100A1 (ENSCMIG00000006167)	ENSCMIG00000006170 ##19	ENSCMIG00000006176 ##19	uba52 (ENSCMIG00000006182)	ENSCMIG00000006201	kxd1 (ENSCMIG00000006204)	homer3b (ENSCMIG00000006208)	ddx49 (ENSCMIG00000006215)	upf1 (ENSCMIG00000006233)	ENSCMIG00000006370	crtc1a (ENSCMIG00000006701)	klhl26 (ENSCMIG00000006708)	ENSCMIG00000006728	MAST3 (ENSCMIG00000006760)	pik3r2 (ENSCMIG00000006897)	ifi30 (ENSCMIG00000007043)	C2CD4C (ENSCMIG00000007045)	GNA15 (ENSCMIG00000007046)
Euteleostomi	ANCESTRAL SPECIES	1361																ENSGT01050000244840.A.b.a ##19	ENSGT00940000164810
Actinopterygii	ANCESTRAL SPECIES	30	ENSGT00950000186323	ENSGT00390000002137	ENSGT00940000155317.a.b	ENSGT00940000155521	ENSGT00940000160403	ENSGT00940000153137.a.b	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155437	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000153322.B.d	ENSGT00510000048167.b.b	ENSGT00940000158129	ENSGT00940000159354	ENSGT00940000159047	ENSGT00390000011365.a	ENSGT00510000046787.e.b	ENSGT00940000163780	ENSGT00940000156583	ENSGT00940000165176
Neopterygii	ANCESTRAL SPECIES	431													ENSGT01030000234583.a.b.b.f	ENSGT00390000017284.b	ENSGT00940000162170	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521
Osteoglossocephalai	ANCESTRAL SPECIES	163	ENSGT00950000186323	ENSGT00940000166070	ENSGT00390000002137	ENSGT00940000155317.a.b	ENSGT00940000160403	ENSGT00940000153137.a.b	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a
Clupeocephala	ANCESTRAL SPECIES	313			ENSGT00690000103768	ENSGT00940000181346	ENSGT00940000160403	ENSGT00940000153137.a.b	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00940000157645.f
Euteleosteomorpha	ANCESTRAL SPECIES	263			ENSGT00690000103768	ENSGT00940000181346	ENSGT00940000160403	ENSGT00940000153137.a.b	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00940000157645.f
Acanthomorphata	ANCESTRAL SPECIES	1						ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00690000103768	ENSGT00940000181346	ENSGT00940000160403	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.a	ENSGT00390000013344	ENSGT00940000159937	ENSGT00940000177365
Euacanthomorphacea	ANCESTRAL SPECIES	66					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000178460	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00970000197534	ENSGT00690000103768	ENSGT00940000181346	ENSGT00940000160403	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.a	ENSGT00390000013344	ENSGT00940000159937
Percomorphaceae	ANCESTRAL SPECIES	78	ENSGT00940000158625	ENSGT00940000159492	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00950000183026.A.a.b	ENSGT00940000157425.A	ENSGT00940000157712	ENSGT00940000159747	ENSGT00940000153899.a.a	ENSGT00940000169511	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000167363	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000177365	ENSGT00940000159937
Percomorphaceae_B	ANCESTRAL SPECIES	14						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000177365	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Ovalentaria	ANCESTRAL SPECIES	15						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000177365	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Atherinomorphae	ANCESTRAL SPECIES	82						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19
Cyprinodontiformes	ANCESTRAL SPECIES	8						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Aplocheiloidei	ANCESTRAL SPECIES	236								ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341
Mangrove rivulus	MODERN SPECIES	1223																F2RL3 (ENSKMAG00000006724) ##19	rest (ENSKMAG00000006703)
Turquoise killifish	MODERN SPECIES	1610	dera (ENSNFUG00015002750)	msrb3 (ENSNFUG00015002732)	LEMD3 (ENSNFUG00015002719)	ENSNFUG00015002711	RINT1 (ENSNFUG00015002621)	ENSNFUG00015002606	ENSNFUG00015002592	HSPA14 (ENSNFUG00015002574)	prl2 (ENSNFUG00015002547)	COX18 (ENSNFUG00015002519)	selenot2 (ENSNFUG00015002511)	ENSNFUG00015002503	sqstm1 (ENSNFUG00015002500)	TBC1D9B (ENSNFUG00015002133)	RNF130 (ENSNFUG00015002000)	F2RL3 (ENSNFUG00015001993) ##19	rest (ENSNFUG00015001987)	exosc3 (ENSNFUG00015001973)	b4galt1l (ENSNFUG00015001947)	TGFBI (ENSNFUG00015001906)	OLA.7742 (ENSNFUG00015001876)	cebp1 (ENSNFUG00015001871)	ARAP3 (ENSNFUG00015001792)	NOA1 (ENSNFUG00015001762)	NIPSNAP3 (ENSNFUG00015001752)	ABCA1B (ENSNFUG00015001724)	SLC44A1 (ENSNFUG00015001707)	TBC1D2 (ENSNFUG00015001697)	ENSNFUG00015001686	NEUROG1 (ENSNFUG00015001682)	PAIP2 (ENSNFUG00015001676)
Cyprinodontoidei	ANCESTRAL SPECIES	23	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000172107	ENSGT00940000170262	ENSGT00940000167363	ENSGT00390000017284.b
Poecilia	ANCESTRAL SPECIES	43	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000170262	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
NAME_6	ANCESTRAL SPECIES	181	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177669	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000170262	ENSGT00940000167363	ENSGT00940000159937	ENSGT00940000172107
Amazon molly	MODERN SPECIES	708				cxcl14 (ENSPFOG00000004576)	fam13b (ENSPFOG00000004272)	KLHL3 (ENSPFOG00000003875)	ENSPFOG00000003857	ENSPFOG00000020515	maea (ENSPFOG00000003711)	zgc:136929 (ENSPFOG00000003535)	spon2b (ENSPFOG00000003474)	ENSPFOG00000003467	ENSPFOG00000024021	fgfrl1a (ENSPFOG00000003381)	ENSPFOG00000003351	F2RL3 (ENSPFOG00000020514) ##19	rest (ENSPFOG00000003274)	b4galt1l (ENSPFOG00000003048)	exosc3 (ENSPFOG00000002984)	tgfbi (ENSPFOG00000002709)	ENSPFOG00000002528	ARAP3 (ENSPFOG00000001918)	noa1 (ENSPFOG00000001578)	nipsnap3a (ENSPFOG00000001454)	ABCA1 (ENSPFOG00000000370)
Sailfin molly	MODERN SPECIES	985		DGKQ (ENSPLAG00000023980)	NFKB1 (ENSPLAG00000023981)	ENSPLAG00000023982	ENSPLAG00000023983	polr2b (ENSPLAG00000023984)	ENSPLAG00000023985	igfbp7 (ENSPLAG00000023986)	COX18 (ENSPLAG00000023987)	selenot2 (ENSPLAG00000023988)	ENSPLAG00000023989	ENSPLAG00000023990	ENSPLAG00000023991	TBC1D9B (ENSPLAG00000023992)	rnf130 (ENSPLAG00000023993)	F2RL3 (ENSPLAG00000023994) ##19	rest (ENSPLAG00000023995)	b4galt1l (ENSPLAG00000023996)	exosc3 (ENSPLAG00000023997)	tgfbi (ENSPLAG00000023998)
Guppy	MODERN SPECIES	440	NFKB1 (ENSPREG00000011064)	ENSPREG00000011101	ENSPREG00000011137	polr2b (ENSPREG00000011157)	ENSPREG00000011233	igfbp7 (ENSPREG00000011250)	COX18 (ENSPREG00000011262)	selenot2 (ENSPREG00000011276)	ENSPREG00000011294	sqstm1 (ENSPREG00000011325)	ENSPREG00000011336	ENSPREG00000011355	ENSPREG00000011385	TBC1D9B (ENSPREG00000011401)	rnf130 (ENSPREG00000011424)	F2RL3 (ENSPREG00000011440) ##19	rest (ENSPREG00000011445)	b4galt1l (ENSPREG00000011461)	exosc3 (ENSPREG00000011472)	tgfbi (ENSPREG00000011486)	ENSPREG00000011509	ENSPREG00000011527	noa1 (ENSPREG00000011564)	ENSPREG00000011577	nipsnap3a (ENSPREG00000011587)	ABCA1 (ENSPREG00000011618)	SLC44A1 (ENSPREG00000011738)	ENSPREG00000011807	neurog1 (ENSPREG00000011823)	ENSPREG00000011838	ENSPREG00000011852
Platyfish	MODERN SPECIES	15	tgfbi (ENSXMAG00000015053)	exosc3 (ENSXMAG00000015111)	b4galt1l (ENSXMAG00000021612)	rest (ENSXMAG00000015136)	ENSXMAG00000029965	ENSXMAG00000021279	igfbp7 (ENSXMAG00000015141)	COX18 (ENSXMAG00000015150)	selenot2 (ENSXMAG00000015160)	rnf4 (ENSXMAG00000015165)	ENSXMAG00000027941	ENSXMAG00000025855	ENSXMAG00000023813	ENSXMAG00000015180	rnf130 (ENSXMAG00000015265)	F2RL3 (ENSXMAG00000015278) ##19	ENSXMAG00000015279	polr2b (ENSXMAG00000015282)	ENSXMAG00000025993	ENSXMAG00000015357	NFKB1 (ENSXMAG00000015369)	DGKQ (ENSXMAG00000015446)	mgat4b (ENSXMAG00000015489)	ENSXMAG00000028503	canx (ENSXMAG00000016067)	MAML1 (ENSXMAG00000024495)	LTC4S (ENSXMAG00000016063)	slit3 (ENSXMAG00000015981)	ENSXMAG00000021616	fgfrl1a (ENSXMAG00000027004)	ENSXMAG00000022117
NAME_4	ANCESTRAL SPECIES	120	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Mummichog	MODERN SPECIES	1164													ENSFHEG00000019530	ENSFHEG00000019569	rnf130 (ENSFHEG00000019577)	F2RL3 (ENSFHEG00000019584) ##19	rest (ENSFHEG00000019612)
Sheepshead minnow	MODERN SPECIES	171							ENSCVAG00000004645	igfbp7 (ENSCVAG00000004660)	COX18 (ENSCVAG00000004685)	selenot2 (ENSCVAG00000004703)	ENSCVAG00000004717	sqstm1 (ENSCVAG00000004740)	ENSCVAG00000000141	TBC1D9B (ENSCVAG00000004880)	rnf130 (ENSCVAG00000004894)	F2RL3 (ENSCVAG00000004899) ##19	rest (ENSCVAG00000004912)	b4galt1l (ENSCVAG00000004938)	exosc3 (ENSCVAG00000004942)	tgfbi (ENSCVAG00000004988)	ENSCVAG00000005014	ENSCVAG00000005072	ENSCVAG00000005090	noa1 (ENSCVAG00000005104)	nipsnap3a (ENSCVAG00000005118)	ABCA1 (ENSCVAG00000005271)	SLC44A1 (ENSCVAG00000005295)	ENSCVAG00000005311	neurog1 (ENSCVAG00000005319)	ENSCVAG00000005325	ENSCVAG00000005337
Oryzias	ANCESTRAL SPECIES	37	ENSGT00390000006915.d.j.b	ENSGT00940000156627.a	ENSGT00940000158366	ENSGT01050000244965.b	ENSGT00940000154518.a	ENSGT00940000167634	ENSGT00730000111223	ENSGT00950000183132.C	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159403	ENSGT00390000013264	ENSGT00390000006503.b	ENSGT00940000155719.b	ENSGT00940000157165.e.b	ENSGT00940000169511	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000167363	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341
Oryzias_b	ANCESTRAL SPECIES	23	ENSGT00940000158366	ENSGT01050000244965.b	ENSGT00940000154518.a	ENSGT00940000167634	ENSGT00730000111223	ENSGT00950000183132.C	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00390000014476	ENSGT00940000177669	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159403	ENSGT00390000013264	ENSGT00390000006503.b	ENSGT00940000155719.b	ENSGT00940000157165.e.b	ENSGT00940000169511	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000167363	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341
Javanese ricefish	MODERN SPECIES	1	metap1 (ENSOJAG00000003206)	ENSOJAG00000002944	ENSOJAG00000002746	SPTLC2 (ENSOJAG00000002313)	LRFN5 (ENSOJAG00000002159)	adsl (ENSOJAG00000002103)	COX18 (ENSOJAG00000001999)	selenot2 (ENSOJAG00000001956)	ENSOJAG00000001941	sqstm1 (ENSOJAG00000001920)	ENSOJAG00000001903	ENSOJAG00000001893	ENSOJAG00000001888	TBC1D9B (ENSOJAG00000001783)	rnf130 (ENSOJAG00000001718)	F2RL3 (ENSOJAG00000001697) ##19	hvcn1 (ENSOJAG00000001684)	SRP72 (ENSOJAG00000001637)	zgc:92045 (ENSOJAG00000001620)	ENSOJAG00000001572	ENSOJAG00000022048	ENSOJAG00000022017	ENSOJAG00000022010	neurog1 (ENSOJAG00000022004)	ENSOJAG00000021996	SLC44A1 (ENSOJAG00000021904)	nipsnap3a (ENSOJAG00000020057)	noa1 (ENSOJAG00000019959)	ENSOJAG00000019832	b4galt1l (ENSOJAG00000019811)	exosc3 (ENSOJAG00000019792)
Indian medaka	MODERN SPECIES	135															ENSOMEG00000021861	F2RL3 (ENSOMEG00000000576) ##19	ENSOMEG00000021890	hvcn1 (ENSOMEG00000021927)	SRP72 (ENSOMEG00000022008)	zgc:92045 (ENSOMEG00000022048)	FAT4 (ENSOMEG00000022144)	B3GAT1 (ENSOMEG00000022201)	ENSOMEG00000022255	ENSOMEG00000022287	ENSOMEG00000022317	neurog1 (ENSOMEG00000007293)	ENSOMEG00000007304	ENSOMEG00000000174	ENSOMEG00000007338	cdk14 (ENSOMEG00000007453)	fzd1 (ENSOMEG00000007482)
Oryzias_a	ANCESTRAL SPECIES	19	ENSGT00390000005922.b	ENSGT00390000002932	ENSGT00390000006915.d.j.b	ENSGT00940000156627.a	ENSGT00940000158366	ENSGT01050000244965.b	ENSGT00940000154518.a	ENSGT00730000111223	ENSGT00950000183132.C	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159403	ENSGT00390000013264	ENSGT00390000006503.b	ENSGT00940000155719.b	ENSGT00940000157165.e.b	ENSGT00940000169511	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000167363	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341
Chinese medaka	MODERN SPECIES	815	dnd1 (ENSOSIG00000022564)	hars (ENSOSIG00000022541)	mlsl (ENSOSIG00000022526)	gpm6aa (ENSOSIG00000022506)	lrit3a (ENSOSIG00000022496)	ENSOSIG00000022493	elovl6 (ENSOSIG00000022492)	PITX2 (ENSOSIG00000022491)	gar1 (ENSOSIG00000022488)	polr2b (ENSOSIG00000022471)	COX18 (ENSOSIG00000022446)	selenot2 (ENSOSIG00000022444)	ENSOSIG00000022442	ENSOSIG00000022439	rnf130 (ENSOSIG00000022437)	F2RL3 (ENSOSIG00000022433) ##19	hvcn1 (ENSOSIG00000022426)	SRP72 (ENSOSIG00000022422)	zgc:92045 (ENSOSIG00000022416)	FAT4 (ENSOSIG00000022412)
Japanese Medaka HdrR	MODERN SPECIES	1	gpm6aa (ENSORLG00000024472)	lrit3a (ENSORLG00000020599)	egf (ENSORLG00000020598)	elovl6 (ENSORLG00000020593)	pitx2 (ENSORLG00000020587)	ENSORLG00000029194	gar1 (ENSORLG00000020583)	polr2b (ENSORLG00000020579)	COX18 (ENSORLG00000020576)	selenot2 (ENSORLG00000020575)	ENSORLG00000020573	ENSORLG00000030157	sqstm1 (ENSORLG00000020572)	TBC1D9B (ENSORLG00000020564)	rnf130 (ENSORLG00000024708)	F2RL3 (ENSORLG00000030468) ##19	hvcn1 (ENSORLG00000020417)	SRP72 (ENSORLG00000020418)	zgc:92045 (ENSORLG00000027722)	ENSORLG00000025448	FAT4 (ENSORLG00000020551)	B3GAT1 (ENSORLG00000023633)	ENSORLG00000025281	ENSORLG00000023325	ENSORLG00000025674	ENSORLG00000028553	ENSORLG00000022388	neurog1 (ENSORLG00000020531)	ENSORLG00000020525	SLC44A1 (ENSORLG00000020514)	ENSORLG00000022354
Ovalentaria_B	ANCESTRAL SPECIES	13						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000177365	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Cichlidae	ANCESTRAL SPECIES	88							ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00950000183137.b.b	ENSGT00940000156471.b.b	ENSGT01100000263544.c.a.a.a	ENSGT00940000155983.a.a	ENSGT00940000158355
Pseudocrenilabrinae	ANCESTRAL SPECIES	17							ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00940000160971	ENSGT00940000159063	ENSGT00940000178166	ENSGT00940000153232.a.b.b.f	ENSGT00940000153232.a.b.b.e	ENSGT00390000015511	ENSGT00940000154508.a.a.s.b	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00940000155374.g.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	20					ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00940000160971	ENSGT00940000159063	ENSGT00940000178166	ENSGT00940000153232.a.b.b.f	ENSGT00940000153232.a.b.b.e	ENSGT00390000015511	ENSGT00940000154508.a.a.s.b	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00940000155374.g.b
Haplochromini	ANCESTRAL SPECIES	14					ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00940000160971	ENSGT00940000159063	ENSGT00940000178166	ENSGT00940000153232.a.b.b.f	ENSGT00940000153232.a.b.b.e	ENSGT00390000015511	ENSGT00940000154508.a.a.s.b	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00940000155374.g.b
Haplochromini_A	ANCESTRAL SPECIES	13					ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00940000160971	ENSGT00940000159063	ENSGT00940000178166	ENSGT00940000153232.a.b.b.f	ENSGT00940000153232.a.b.b.e	ENSGT00390000015511	ENSGT00940000154508.a.a.s.b	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00940000155374.g.b
Haplochromini_B	ANCESTRAL SPECIES	7						ENSGT00920000149123.d	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00950000183088.a.a	ENSGT00940000160971	ENSGT00940000159063	ENSGT00940000178166	ENSGT00940000153232.a.b.b.f	ENSGT00940000153232.a.b.b.e	ENSGT00940000154508.a.a.s.b	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00940000155374.g.b	ENSGT00940000163551.i.a
Zebra mbuna	MODERN SPECIES	1								polr2b (ENSMZEG00005022118)	igfbp7 (ENSMZEG00005022114)	COX18 (ENSMZEG00005022099)	selenot2 (ENSMZEG00005022089)	ENSMZEG00005022081	sqstm1 (ENSMZEG00005022073)	TBC1D9B (ENSMZEG00005022054)	rnf130 (ENSMZEG00005022046)	F2RL3 (ENSMZEG00005022043) ##19	ARAP3 (ENSMZEG00005022035)	ENSMZEG00005022030	ARHGEF37 (ENSMZEG00005022021)	ENSMZEG00005022004	SLITRK4 (ENSMZEG00005022002)	ENSMZEG00005021990	ENSMZEG00005021989
Eastern happy	MODERN SPECIES	11	ENSACLG00000018344	SLITRK2 (ENSACLG00000018391)	ENSACLG00000018438	ENSACLG00000018444	ENSACLG00000018450	hspa9 (ENSACLG00000018511)	polr2b (ENSACLG00000018568)	igfbp7 (ENSACLG00000018703)	ENSACLG00000018714	selenot2 (ENSACLG00000018738)	ENSACLG00000018772	sqstm1 (ENSACLG00000018790)	ENSACLG00000018802	TBC1D9B (ENSACLG00000018821)	rnf130 (ENSACLG00000019055)	F2RL3 (ENSACLG00000019065) ##19	ARAP3 (ENSACLG00000019097)	ENSACLG00000019142	ARHGEF37 (ENSACLG00000019191)	ENSACLG00000019219	SLITRK4 (ENSACLG00000019274)	ENSACLG00000019283	ENSACLG00000019334	ENSACLG00000019375	ENSACLG00000019409	ENSACLG00000019470	ENSACLG00000019498	irf2 (ENSACLG00000019528)	ENSACLG00000019904	ENSACLG00000019937	CASP3 (ENSACLG00000020222)
P. nyererei	MODERN SPECIES	97																F2RL3 (ENSPNYG00000024223) ##19
Lyretail cichlid	MODERN SPECIES	292		ENSNBRG00000001477	SLITRK2 (ENSNBRG00000001452)	ENSNBRG00000001437	ENSNBRG00000001424	ENSNBRG00000001400	hspa9 (ENSNBRG00000001315)	polr2b (ENSNBRG00000001235)	igfbp7 (ENSNBRG00000001223)	COX18 (ENSNBRG00000001173)	selenot2 (ENSNBRG00000001150)	ENSNBRG00000001098	sqstm1 (ENSNBRG00000001087)	TBC1D9B (ENSNBRG00000001033)	rnf130 (ENSNBRG00000000957)	F2RL3 (ENSNBRG00000000934) ##19	ENSNBRG00000000921	ENSNBRG00000000860	ARHGEF37 (ENSNBRG00000000798)	ENSNBRG00000000775	SLITRK4 (ENSNBRG00000000772)	ENSNBRG00000000747	ENSNBRG00000000719	irf2 (ENSNBRG00000000706)	ENSNBRG00000000629	CASP3 (ENSNBRG00000000621)	acsl1b (ENSNBRG00000000551)	st3gal5 (ENSNBRG00000000543)	POLR1A (ENSNBRG00000000519)	ptcd3 (ENSNBRG00000000447)	PLS3 (ENSNBRG00000000385)
Nile tilapia	MODERN SPECIES	11				ENSONIG00000041409	polr2b (ENSONIG00000000070)	igfbp7 (ENSONIG00000000074)	ENSONIG00000000100	selenot2 (ENSONIG00000000101)	ENSONIG00000028573	sqstm1 (ENSONIG00000000103)	ENSONIG00000030002	ENSONIG00000027374	TBC1D9B (ENSONIG00000000105)	ENSONIG00000028836	rnf130 (ENSONIG00000000108)	F2RL3 (ENSONIG00000000110) ##19	ENSONIG00000042751	ARAP3 (ENSONIG00000000111)	ENSONIG00000000118	ENSONIG00000033685	ENSONIG00000041217	ENSONIG00000028462	ENSONIG00000000067	ENSONIG00000037551	ENSONIG00000041215	ENSONIG00000034229	ENSONIG00000038800	ENSONIG00000038694	SLITRK4 (ENSONIG00000020803)	ENSONIG00000038370	ENSONIG00000033050
Midas cichlid	MODERN SPECIES	369						ENSACIG00000009609	POLR2B (ENSACIG00000009631)	igfbp7 (ENSACIG00000009680)	ENSACIG00000009737	selenot2 (ENSACIG00000009766)	ENSACIG00000009797	sqstm1 (ENSACIG00000009826)	ENSACIG00000009878	TBC1D9B (ENSACIG00000009896)	rnf130 (ENSACIG00000009953)	F2RL3 (ENSACIG00000010006) ##19	ENSACIG00000010029	ENSACIG00000010171	ENSACIG00000010192	ENSACIG00000010231	ENSACIG00000010273	pde6a (ENSACIG00000010282)	ENSACIG00000010335	thoc3 (ENSACIG00000010364)	cplx2 (ENSACIG00000010376)
Pomacentridae	ANCESTRAL SPECIES																	ENSGT01050000244840.A.b.a ##19
Pomacentridae_A	ANCESTRAL SPECIES	280														ENSGT00940000157465	ENSGT00940000158554	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869
Amphiprion	ANCESTRAL SPECIES	177												ENSGT00940000177214	ENSGT00940000157465	ENSGT00950000182912.b.a.b.b	ENSGT00940000158554	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00950000183174.B.a.f	ENSGT00940000175899	ENSGT00440000037338	ENSGT00940000170279
Clown anemonefish	MODERN SPECIES	3139																F2RL3 (ENSAOCG00000012631) ##19	ENSAOCG00000012645
Orange clownfish	MODERN SPECIES	4	rxfp1 (ENSAPEG00000000797)	etfdh (ENSAPEG00000000752)	ppid (ENSAPEG00000000717)	ENSAPEG00000000673	RAPGEF2 (ENSAPEG00000000508)	fstl5 (ENSAPEG00000000433)	qdpra (ENSAPEG00000000377)	ldb2a (ENSAPEG00000000307)	TAPT1 (ENSAPEG00000019221)	SLITRK2 (ENSAPEG00000019167)	ENSAPEG00000019097	ENSAPEG00000019069	rnf130 (ENSAPEG00000019044)	ENSAPEG00000019022	TBC1D9B (ENSAPEG00000018920)	F2RL3 (ENSAPEG00000018898) ##19	ARAP3 (ENSAPEG00000018580)	tgfbi (ENSAPEG00000018521)	ENSAPEG00000018499	exosc3 (ENSAPEG00000018485)	b4galt1l (ENSAPEG00000018474)	rest (ENSAPEG00000018458)	noa1 (ENSAPEG00000018447)	nipsnap3a (ENSAPEG00000018440)	ABCA1 (ENSAPEG00000018330)	ENSAPEG00000018300	SLC44A1 (ENSAPEG00000018244)	TBC1D2 (ENSAPEG00000018228)	naa15a (ENSAPEG00000018184)	ENSAPEG00000018167	ENSAPEG00000018158
Spiny chromis	MODERN SPECIES	2158														rnf130 (ENSAPOG00000015124)	TBC1D9B (ENSAPOG00000015040)	F2RL3 (ENSAPOG00000014914) ##19	ENSAPOG00000014896	ENSAPOG00000014724
Percomorphaceae_C	ANCESTRAL SPECIES	16					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Eupercaria	ANCESTRAL SPECIES	12					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000172107	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Eupecaria_A	ANCESTRAL SPECIES	13					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000172107	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Ballan wrasse	MODERN SPECIES	642								ENSLBEG00000024645	ENSLBEG00000024631	sqstm1 (ENSLBEG00000024608)	ENSLBEG00000024574	ENSLBEG00000024522	ENSLBEG00000024490	TBC1D9B (ENSLBEG00000024373)	rnf130 (ENSLBEG00000024266)	F2RL3 (ENSLBEG00000024223) ##19	TBC1D2 (ENSLBEG00000024177)	SLC44A1 (ENSLBEG00000024095)	ABCA1 (ENSLBEG00000024003)	nipsnap3a (ENSLBEG00000023937)	noa1 (ENSLBEG00000023897)
Eupecaria_B	ANCESTRAL SPECIES	13					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000172107	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a
Perciformes	ANCESTRAL SPECIES	47						ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159937	ENSGT00940000172107	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000167363
Cottioidei	ANCESTRAL SPECIES	78							ENSGT00390000010318	ENSGT00390000011725.c	ENSGT01000000220275	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000167363
Lumpfish	MODERN SPECIES	1	g3bp1 (ENSCLMG00005004122)	glra1 (ENSCLMG00005004137)	ENSCLMG00005004160	slc25a48 (ENSCLMG00005004162)	ENSCLMG00005004163	sqstm1 (ENSCLMG00005004165)	ENSCLMG00005004166	selenot2 (ENSCLMG00005004168)	ENSCLMG00005004169	COX18 (ENSCLMG00005004170)	igfbp7 (ENSCLMG00005004171)	polr2b (ENSCLMG00005004173)	TBC1D9B (ENSCLMG00005004189)	ENSCLMG00005006059	rnf130 (ENSCLMG00005006060)	F2RL3 (ENSCLMG00005006074) ##19	TBC1D2 (ENSCLMG00005006076)	SLC44A1 (ENSCLMG00005006081)	ABCA1 (ENSCLMG00005006332)	nipsnap3a (ENSCLMG00005016892)	noa1 (ENSCLMG00005016894)	rest (ENSCLMG00005016895)	ENSCLMG00005016896	b4galt1l (ENSCLMG00005016899)	ENSCLMG00005016905	ENSCLMG00005016912	ENSCLMG00005016915	exosc3 (ENSCLMG00005016919)	neurog1 (ENSCLMG00005016921)	ENSCLMG00005016922	ENSCLMG00005016925
Stickleback	MODERN SPECIES	3								ENSGACG00000016217	selenot2 (ENSGACG00000016220)	COX18 (ENSGACG00000016224)	igfbp7 (ENSGACG00000016231)	polr2b (ENSGACG00000016234)	sqstm1 (ENSGACG00000016271)	TBC1D9B (ENSGACG00000016277)	rnf130 (ENSGACG00000016279)	F2RL3 (ENSGACG00000016282) ##19	TBC1D2 (ENSGACG00000016283)	SLC44A1 (ENSGACG00000016300)	ABCA1 (ENSGACG00000016304)	nipsnap3a (ENSGACG00000016311)	noa1 (ENSGACG00000016318)	rest (ENSGACG00000016320)	b4galt1l (ENSGACG00000016321)	ENSGACG00000016326	ENSGACG00000016329	exosc3 (ENSGACG00000016332)	ENSGACG00000016340	tgfbi (ENSGACG00000016337)	ENSGACG00000016341	ARAP3 (ENSGACG00000016344)	cplx2 (ENSGACG00000016352)
Perciformes_a	ANCESTRAL SPECIES	189																ENSGT01050000244840.A.b.a ##19	ENSGT00940000159937	ENSGT00940000172107
Channel bull blenny	MODERN SPECIES	141										ENSCGOG00000021590	ENSCGOG00000021593	sqstm1 (ENSCGOG00000021596)	TBC1D9B (ENSCGOG00000021639)	rnf130 (ENSCGOG00000022637)	ENSCGOG00000022642	F2RL3 (ENSCGOG00000022644) ##19	TBC1D2 (ENSCGOG00000022645)	ENSCGOG00000022649	SLC44A1 (ENSCGOG00000022657)	ABCA1 (ENSCGOG00000022926)
Eupecaria_C	ANCESTRAL SPECIES	12						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511	ENSGT00950000182859.A.a.a.a	ENSGT00940000155109.b	ENSGT00940000153169.A.b.b.e.b	ENSGT00940000158625	ENSGT00940000159492	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00950000183026.A.a.b	ENSGT00940000157425.A
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14						ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511	ENSGT00950000182859.A.a.a.a	ENSGT00940000155109.b	ENSGT00940000158625	ENSGT00940000159492	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00950000183026.A.a.b	ENSGT00940000157425.A	ENSGT00940000157712
Large yellow croaker	MODERN SPECIES		ENSLCRG00005004364	tgfbi (ENSLCRG00005004287)	TBC1D9B (ENSLCRG00005001740)	exosc3 (ENSLCRG00005001501)	b4galt1l (ENSLCRG00005001492)	rest (ENSLCRG00005001480)	noa1 (ENSLCRG00005001463)	nipsnap3a (ENSLCRG00005001453)	ABCA1 (ENSLCRG00005001237)	SLC44A1 (ENSLCRG00005001149)	TBC1D2 (ENSLCRG00005001144)	ARAP3 (ENSLCRG00005001049)	ENSLCRG00005001005	ENSLCRG00005001000	ENSLCRG00005000998	F2RL3 (ENSLCRG00005000994) ##19	neurog1 (ENSLCRG00005000993)	ENSLCRG00005000990	ENSLCRG00005000986	ENSLCRG00005000974	ENSLCRG00005000965	ENSLCRG00005000950	ENSLCRG00005000939	ENSLCRG00005000753	NFKB1 (ENSLCRG00005000662)	mgat4b (ENSLCRG00005000407)	canx (ENSLCRG00005000360)	MAML1 (ENSLCRG00005000350)	LTC4S (ENSLCRG00005000346)	ENSLCRG00005000343	emx3 (ENSLCRG00005000342)
European seabass	MODERN SPECIES	12	ENSDLAG00005002855	ENSDLAG00005016386	ENSDLAG00005002766	ENSDLAG00005033396	ENSDLAG00005032216	ENSDLAG00005030632	ENSDLAG00005029023	ENSDLAG00005032670	ENSDLAG00005027850	ENSDLAG00005030342	ENSDLAG00005029221	SQSTM1 (ENSDLAG00005031805)	ENSDLAG00005002472	ENSDLAG00005002941	RNF130 (ENSDLAG00005002672)	ENSDLAG00005026559 ##19	exosc3 (ENSDLAG00005002490)	b4galt1l (ENSDLAG00005002512)	rest (ENSDLAG00005027077)	noa1 (ENSDLAG00005011470)	NIPSNAP3B (ENSDLAG00005026799)	ENSDLAG00005027122	SLC44A1 (ENSDLAG00005003400)	ENSDLAG00005032287	ENSDLAG00005003163	ENSDLAG00005026990	ENSDLAG00005032833	ENSDLAG00005033633	tgfbi (ENSDLAG00005030215)	ENSDLAG00005009993	ENSDLAG00005008472
Gilthead seabream	MODERN SPECIES	9										COX18 (ENSSAUG00010002731)	igfbp7 (ENSSAUG00010002740)	TBC1D9B (ENSSAUG00010002769)	ENSSAUG00010003088	rnf130 (ENSSAUG00010003093)	ENSSAUG00010003097	F2RL3 (ENSSAUG00010003104) ##19	neurog1 (ENSSAUG00010003112)	b4galt1l (ENSSAUG00010003120)	ENSSAUG00010003123	rest (ENSSAUG00010003125)	noa1 (ENSSAUG00010003129)	nipsnap3a (ENSSAUG00010003137)	ABCA1 (ENSSAUG00010003166)	ENSSAUG00010003251	SLC44A1 (ENSSAUG00010003262)	ENSSAUG00010003299	TBC1D2 (ENSSAUG00010003307)	ENSSAUG00010003315	selenot2 (ENSSAUG00010003318)	ENSSAUG00010003322	polr2b (ENSSAUG00010003334)
Percomorphaceae_D	ANCESTRAL SPECIES	17					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Anabantaria	ANCESTRAL SPECIES	15					ENSGT01030000234799	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT01000000220275	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Anabantoidei	ANCESTRAL SPECIES	11						ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT01060000249559	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511	ENSGT00950000182859.A.a.a.a
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	22	ENSATEG00000018177	LTC4S (ENSATEG00000018191)	ENSATEG00000029494	ENSATEG00000027104	b4galt7 (ENSATEG00000027061)	ENSATEG00000018306	ENSATEG00000018323	ENSATEG00000018340	ENSATEG00000018380	ENSATEG00000018427	ENSATEG00000018447	ENSATEG00000018501	ENSATEG00000018516	ENSATEG00000018534	ENSATEG00000018598	ENSATEG00000018604 ##19	ENSATEG00000018620	ENSATEG00000018648	ENSATEG00000018673	ENSATEG00000018789	ENSATEG00000027072	noa1 (ENSATEG00000018828)	rest (ENSATEG00000018878)	b4galt1l (ENSATEG00000018933)	exosc3 (ENSATEG00000018952)	ENSATEG00000019047	ENSATEG00000019086	ENSATEG00000019294 ##19	RNF130 (ENSATEG00000019307)	ENSATEG00000019338	ENSATEG00000019389
Climbing perch	MODERN SPECIES	22				ENSATEG00000019576	ENSATEG00000019522	ENSATEG00000028603	ENSATEG00000019508	ENSATEG00000028456	polr2b (ENSATEG00000019461)	ENSATEG00000019442	ENSATEG00000025738	SQSTM1 (ENSATEG00000019417)	ENSATEG00000019389	ENSATEG00000019338	RNF130 (ENSATEG00000019307)	ENSATEG00000019294 ##19	ENSATEG00000019086	ENSATEG00000019047	exosc3 (ENSATEG00000018952)	b4galt1l (ENSATEG00000018933)	rest (ENSATEG00000018878)	noa1 (ENSATEG00000018828)	ENSATEG00000027072	ENSATEG00000018789	ENSATEG00000018673	ENSATEG00000018648	ENSATEG00000018620	ENSATEG00000018604 ##19	ENSATEG00000018598	ENSATEG00000018534	ENSATEG00000018516
Carangaria	ANCESTRAL SPECIES	15						ENSGT01060000249559	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a.h	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Carangaria_A	ANCESTRAL SPECIES	17						ENSGT01060000249559	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a.h	ENSGT00940000157174.d	ENSGT00940000159937	ENSGT00940000167363	ENSGT00390000017284.b	ENSGT00940000153322.B.d.a	ENSGT00940000169511
Barramundi perch	MODERN SPECIES	539							ENSLCAG00010000693	ENSLCAG00010000687	selenot2 (ENSLCAG00010000680)	ENSLCAG00010000670	polr2b (ENSLCAG00010000619)	sqstm1 (ENSLCAG00010000566)	ENSLCAG00010000560	TBC1D9B (ENSLCAG00010000441)	rnf130 (ENSLCAG00010000314)	F2RL3 (ENSLCAG00010000299) ##19	ENSLCAG00010000260	ENSLCAG00010000227	tgfbi (ENSLCAG00010000194)	EXOSC3 (ENSLCAG00010000170)	ENSLCAG00010027679	FAT2 (ENSLCAG00010027678)
Seriola	ANCESTRAL SPECIES	125						ENSGT01060000249559	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00530000063860.a	ENSGT00940000153596.A	ENSGT00940000155244.d	ENSGT00940000155341	ENSGT00390000001695	ENSGT00950000183018.b	ENSGT00940000154658.b.i.a.h	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT00950000182859.A.a.a.a	ENSGT00940000169511	ENSGT00940000153322.B.d.a
Greater amberjack	MODERN SPECIES	127						ENSSDUG00000016551	polr2b (ENSSDUG00000016496)	igfbp7 (ENSSDUG00000016478)	selenot2 (ENSSDUG00000016463)	COX18 (ENSSDUG00000016344)	ENSSDUG00000016310	sqstm1 (ENSSDUG00000016280)	ENSSDUG00000016296	TBC1D9B (ENSSDUG00000016155)	rnf130 (ENSSDUG00000016100)	F2RL3 (ENSSDUG00000016088) ##19	ARAP3 (ENSSDUG00000015977)	ENSSDUG00000015951	tgfbi (ENSSDUG00000015905)	exosc3 (ENSSDUG00000015892)	b4galt1l (ENSSDUG00000015879)	rest (ENSSDUG00000015873)	noa1 (ENSSDUG00000015865)	nipsnap3a (ENSSDUG00000015845)	ABCA1 (ENSSDUG00000015752)	DGKQ (ENSSDUG00000015709)	NFKB1 (ENSSDUG00000015678)	ENSSDUG00000015666	ENSSDUG00000015593	ENSSDUG00000015514	ENSSDUG00000015369
Yellowtail amberjack	MODERN SPECIES	3020							ENSSLDG00000016790	polr2b (ENSSLDG00000016811)	igfbp7 (ENSSLDG00000016873)	COX18 (ENSSLDG00000016900)	selenot2 (ENSSLDG00000016945)	ENSSLDG00000016967	sqstm1 (ENSSLDG00000016986)	TBC1D9B (ENSSLDG00000017009)	rnf130 (ENSSLDG00000017060)	F2RL3 (ENSSLDG00000017115) ##19	ARAP3 (ENSSLDG00000017137)	ENSSLDG00000017200	tgfbi (ENSSLDG00000017226)	exosc3 (ENSSLDG00000017276)	b4galt1l (ENSSLDG00000017304)	rest (ENSSLDG00000017328)	noa1 (ENSSLDG00000017344)	nipsnap3a (ENSSLDG00000017361)	ABCA1 (ENSSLDG00000017383)	DGKQ (ENSSLDG00000017466)	NFKB1 (ENSSLDG00000017521)	ENSSLDG00000017574	ENSSLDG00000017613	ENSSLDG00000017641
Pleuronectoidei	ANCESTRAL SPECIES	83							ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00940000159937	ENSGT00940000157174.d	ENSGT00940000154658.b.i.a.h	ENSGT00950000183018.b	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT00940000169511	ENSGT00940000153322.B.d.a	ENSGT00390000017284.b	ENSGT00940000167363
Turbot	MODERN SPECIES	4						ENSSMAG00000032335	polr2b (ENSSMAG00000036590)	igfbp7 (ENSSMAG00000023414)	ENSSMAG00000025319	ENSSMAG00000036792	ENSSMAG00000036836	SQSTM1 (ENSSMAG00000023286)	ENSSMAG00000037527	ENSSMAG00000029343	RNF130 (ENSSMAG00000024891)	ENSSMAG00000025438 ##19	ENSSMAG00000036047	ENSSMAG00000023085	ENSSMAG00000028608	nipsnap3a (ENSSMAG00000034958)	noa1 (ENSSMAG00000037313)	rest (ENSSMAG00000031492)	b4galt1l (ENSSMAG00000032284)	exosc3 (ENSSMAG00000023796)	ENSSMAG00000029945	ENSSMAG00000028932	ENSSMAG00000006253	ENSSMAG00000031359	ENSSMAG00000006097	ENSSMAG00000006078	ENSSMAG00000032935
Tongue sole	MODERN SPECIES	6	GPR101 (ENSCSEG00000005199)	ENSCSEG00000005205	rbmx (ENSCSEG00000005240)	ARHGEF6 (ENSCSEG00000005281)	cd40lg (ENSCSEG00000005310)	ENSCSEG00000005311	ENSCSEG00000005312	polr2b (ENSCSEG00000005318)	ENSCSEG00000005328	selenot2 (ENSCSEG00000005341)	ENSCSEG00000005349	sqstm1 (ENSCSEG00000005368)	ENSCSEG00000005373	TBC1D9B (ENSCSEG00000005382)	rnf130 (ENSCSEG00000005413)	F2RL3 (ENSCSEG00000005425) ##19	TBC1D2 (ENSCSEG00000005428)	SLC44A1 (ENSCSEG00000005435)	ABCA1 (ENSCSEG00000005451)	nipsnap3a (ENSCSEG00000005511)	noa1 (ENSCSEG00000005517)	rest (ENSCSEG00000005522)	b4galt1l (ENSCSEG00000005529)	exosc3 (ENSCSEG00000005539)	tgfbi (ENSCSEG00000005542)	ENSCSEG00000005554	ARAP3 (ENSCSEG00000005569)	ENSCSEG00000005609	ENSCSEG00000005626	ubl3b (ENSCSEG00000005632)	FOXO4 (ENSCSEG00000005641)
Tiger tail seahorse	MODERN SPECIES	506	neurog1 (ENSHCOG00000017404)	TBC1D2 (ENSHCOG00000017393)	SLC44A1 (ENSHCOG00000017344)	ENSHCOG00000017202	ABCA1 (ENSHCOG00000017057)	polr2b (ENSHCOG00000013588)	igfbp7 (ENSHCOG00000013565)	COX18 (ENSHCOG00000013555)	selenot2 (ENSHCOG00000013542)	rnf4 (ENSHCOG00000013524)	sqstm1 (ENSHCOG00000013492)	ENSHCOG00000013454	ENSHCOG00000000845	ENSHCOG00000013405	rnf130 (ENSHCOG00000013401)	F2RL3 (ENSHCOG00000013396) ##19	exosc3 (ENSHCOG00000013389)	ENSHCOG00000000581	ENSHCOG00000013223	EBF4 (ENSHCOG00000013199)	KCNJ10 (ENSHCOG00000012863)	ENSHCOG00000012821	ENSHCOG00000012806	ENSHCOG00000012781	sgms2b (ENSHCOG00000012755)	aimp1b (ENSHCOG00000000370)	ENSHCOG00000012693	ENSHCOG00000012673	ENSHCOG00000012670	wdr55 (ENSHCOG00000012660)	ENSHCOG00000012642
Pinecone sodierfish	MODERN SPECIES	1				ENSMMDG00005015064	ENSMMDG00005015068	polr2b (ENSMMDG00005015073)	igfbp7 (ENSMMDG00005015083)	ENSMMDG00005015085	selenot2 (ENSMMDG00005015087)	ENSMMDG00005015091	sqstm1 (ENSMMDG00005015093)	ENSMMDG00005015095	TBC1D9B (ENSMMDG00005015134)	rnf130 (ENSMMDG00005016387)	ENSMMDG00005016393	F2RL3 (ENSMMDG00005016394) ##19	lect2.1 (ENSMMDG00005016398)	ENSMMDG00005016442	PCDH1 (ENSMMDG00005016445)	ENSMMDG00005016446	ENSMMDG00005016448	ENSMMDG00005016450	ENSMMDG00005016454	PCDH12 (ENSMMDG00005016456)	ENSMMDG00005016459	LTC4S (ENSMMDG00005016463)	MAML1 (ENSMMDG00005016468)	canx (ENSMMDG00005016543)	mgat4b (ENSMMDG00005018678)	DGKQ (ENSMMDG00005018688)	NFKB1 (ENSMMDG00005018695)
Cod	MODERN SPECIES	1														ENSGMOG00000000082	rnf130 (ENSGMOG00000000091)	ENSGMOG00000031285 ##19	lect2.1 (ENSGMOG00000000097)	ENSGMOG00000025399	ENSGMOG00000013452	ENSGMOG00000030878	ENSGMOG00000008209	ENSGMOG00000037088	ENSGMOG00000026404	LTC4S (ENSGMOG00000001927)	ENSGMOG00000032705	canx (ENSGMOG00000001868)	mgat4b (ENSGMOG00000033012)	ENSGMOG00000018915	ENSGMOG00000007506	ENSGMOG00000007501	ENSGMOG00000006055
Protacanthopterygii	ANCESTRAL SPECIES	58	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00940000160403	ENSGT00940000160738.m	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000156665.a	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b	ENSGT00730000111223	ENSGT00940000167634	ENSGT00940000154518.a	ENSGT01050000244965.b	ENSGT00940000158366	ENSGT00940000156627.a	ENSGT00390000006915.d.j.b	ENSGT00910000144159.B	ENSGT00940000165522.a	ENSGT00940000153230.A	ENSGT00950000183045.C
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	34	ENSGT00940000166497.a	ENSGT00950000183135.B.a.b.i.b	ENSGT00940000167144.c	ENSGT00940000159024.d	ENSGT00940000157266.b.d	ENSGT00940000160403.c	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a.f	ENSGT00950000182915.a.a.a.j	ENSGT00940000156526.a.m	ENSGT00390000002781.k	ENSGT00390000006124	ENSGT00940000158554.a	ENSGT00940000157465.o.b	ENSGT01050000244840.A.b.a.e ##19	ENSGT00390000015484.i.m	ENSGT00940000156665.a.c	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b.m.b	ENSGT00730000111223.m	ENSGT00940000167634	ENSGT00940000154518.a.g	ENSGT01050000244965.b.c.a	ENSGT00940000158366	ENSGT00940000156627.a.e	ENSGT00390000006915.d.j.b.a	ENSGT00940000165522.a.e	ENSGT01030000234566.e.b.a.a.a.b.h	ENSGT00390000008593.a.e	ENSGT00940000158645.f
Huchen	MODERN SPECIES		nanos1 (ENSHHUG00000000503)	ap1ar (ENSHHUG00000000527)	gabra4 (ENSHHUG00000000544)	GABRA2 (ENSHHUG00000000583)	ENSHHUG00000000640	PCDH12 (ENSHHUG00000000644)	ENSHHUG00000000648	LTC4S (ENSHHUG00000000654)	MAML1 (ENSHHUG00000000656)	canx (ENSHHUG00000000657)	mgat4b (ENSHHUG00000000790)	sqstm1 (ENSHHUG00000000816)	ENSHHUG00000000831	TBC1D9B (ENSHHUG00000000838)	rnf130 (ENSHHUG00000001258)	F2RL3 (ENSHHUG00000001265) ##19	LECT2 (ENSHHUG00000001269)	LINGO2 (ENSHHUG00000001340)	ENSHHUG00000001348	ENSHHUG00000001356	ENSHHUG00000001373	gar1 (ENSHHUG00000001391)	ENSHHUG00000001408	pitx2 (ENSHHUG00000001426)	elovl6 (ENSHHUG00000001454)	ENSHHUG00000001480	egf (ENSHHUG00000001501)	lrit3a (ENSHHUG00000001510)	gpm6aa (ENSHHUG00000001547)	asb5a (ENSHHUG00000001597)	ENSHHUG00000001621
Salmoninae_a	ANCESTRAL SPECIES	40	ENSGT00940000166497.a	ENSGT00950000183135.B.a.b.i.b	ENSGT00940000167144.c	ENSGT00940000159024.d	ENSGT00940000157266.b.d	ENSGT00940000160403.c	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a.f	ENSGT00950000182915.a.a.a.j	ENSGT00940000156526.a.m	ENSGT00390000002781.k	ENSGT00390000006124	ENSGT00940000158554.a	ENSGT00940000157465.o.b	ENSGT01050000244840.A.b.a.e ##19	ENSGT00390000015484.i.m	ENSGT00940000156665.a.c	ENSGT00940000164379.e.b.m.b	ENSGT00730000111223.m	ENSGT00940000167634	ENSGT00940000154518.a.g	ENSGT01050000244965.b.c.a	ENSGT00940000158366	ENSGT00940000156627.a.e	ENSGT00390000006915.d.j.b.a	ENSGT00940000165522.a.e	ENSGT01030000234566.e.b.a.a.a.b.h	ENSGT00390000008593.a.e	ENSGT00940000158645.f	ENSGT00940000156344.b.b
Salmo	ANCESTRAL SPECIES	43	ENSGT00940000166497.a	ENSGT00950000183135.B.a.b.i.b	ENSGT00940000167144.c	ENSGT00940000159024.d	ENSGT00940000157266.b.d	ENSGT00940000160403.c	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a.f	ENSGT00950000182915.a.a.a.j	ENSGT00940000156526.a.m	ENSGT00390000002781.k	ENSGT00390000006124	ENSGT00940000158554.a	ENSGT00940000157465.o.b	ENSGT01050000244840.A.b.a.e ##19	ENSGT00390000015484.i.m	ENSGT00940000156665.a.c	ENSGT00940000164379.e.b.m.b	ENSGT00730000111223.m	ENSGT00940000167634	ENSGT00940000154518.a.g	ENSGT01050000244965.b.c.a	ENSGT00940000158366.o	ENSGT00940000156627.a.e	ENSGT00390000006915.d.j.b.a	ENSGT00940000165522.a.e	ENSGT01030000234566.e.b.a.a.a.b.h	ENSGT00390000008593.a.e	ENSGT00940000158645.f	ENSGT00940000156344.b.b
River trout	MODERN SPECIES	4	lbx2 (ENSSTUG00000029158)	nanos1 (ENSSTUG00000029148)	ap1ar (ENSSTUG00000029120)	gabra4 (ENSSTUG00000029107)	GABRA2 (ENSSTUG00000027559)	PCDH12 (ENSSTUG00000027533)	ENSSTUG00000027528	LTC4S (ENSSTUG00000027520)	MAML1 (ENSSTUG00000027510)	canx (ENSSTUG00000027494)	mgat4b (ENSSTUG00000027122)	sqstm1 (ENSSTUG00000027093)	ENSSTUG00000027088	TBC1D9B (ENSSTUG00000026593)	rnf130 (ENSSTUG00000026535)	F2RL3 (ENSSTUG00000026525) ##19	ENSSTUG00000026447	ENSSTUG00000026428	LINGO2 (ENSSTUG00000026423)	ENSSTUG00000026280	gar1 (ENSSTUG00000026245)	adh5l (ENSSTUG00000026137)	pitx2 (ENSSTUG00000026093)	elovl6 (ENSSTUG00000026065)	egf (ENSSTUG00000023337)	lrit3a (ENSSTUG00000023215)	gpm6aa (ENSSTUG00000023068)	asb5a (ENSSTUG00000023050)	ENSSTUG00000023048	ENSSTUG00000023042	TENM3 (ENSSTUG00000017931)
Atlantic salmon	MODERN SPECIES	28	pcgf1 (ENSSSAG00000073584)	lbx2 (ENSSSAG00000117592)	nanos1 (ENSSSAG00000073581)	ap1ar (ENSSSAG00000073576)	gabra4 (ENSSSAG00000107159)	ENSSSAG00000073523	ENSSSAG00000073511	ENSSSAG00000106678	LTC4S (ENSSSAG00000100228)	ENSSSAG00000107190	canx (ENSSSAG00000073461)	mgat4b (ENSSSAG00000118203)	TBC1D9B (ENSSSAG00000073271)	sqstm1 (ENSSSAG00000073443)	rnf130 (ENSSSAG00000073187)	ENSSSAG00000104182 ##19	ENSSSAG00000115953	ENSSSAG00000073159	ENSSSAG00000073155	ENSSSAG00000083049	ENSSSAG00000073130	ENSSSAG00000073128	zgc:77938 (ENSSSAG00000073069)	pitx2 (ENSSSAG00000073060)	elovl6 (ENSSSAG00000073055)	egf (ENSSSAG00000072853)	lrit3a (ENSSSAG00000113332)	dmb (ENSSSAG00000103423)	asb5a (ENSSSAG00000074584)	ENSSSAG00000070557	ENSSSAG00000070365
Oncorhynchus	ANCESTRAL SPECIES	39	ENSGT00940000166497.a	ENSGT00950000183135.B.a.b.j	ENSGT00940000167144.c	ENSGT00940000159024.d	ENSGT00940000157266.b.d	ENSGT00940000160403.c	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a.f	ENSGT00950000182915.a.a.a.j	ENSGT00940000156526.a.m	ENSGT00390000002781.k	ENSGT00390000006124	ENSGT00940000158554.a	ENSGT00940000157465.o.b	ENSGT01050000244840.A.b.a.e ##19	ENSGT00390000015484.i.m	ENSGT00940000156665.a.c	ENSGT00940000164379.e.b.m.b	ENSGT00730000111223.m	ENSGT00940000167634	ENSGT00940000154518.a.g	ENSGT01050000244965.b.c.a	ENSGT00940000158366	ENSGT00940000156627.a.e	ENSGT00390000006915.d.j.b.a	ENSGT00940000165522.a.e	ENSGT01030000234566.e.b.a.a.a.b.h	ENSGT00390000008593.a.e	ENSGT00940000158645.f	ENSGT00940000156344.b.b
Rainbow trout	MODERN SPECIES	23	ap1ar (ENSOMYG00000044772)	gabra4 (ENSOMYG00000044782)	ENSOMYG00000044811	ENSOMYG00000070618	ENSOMYG00000044858	ENSOMYG00000044862	LTC4S (ENSOMYG00000051938)	ENSOMYG00000071499	canx (ENSOMYG00000044873)	mgat4b (ENSOMYG00000044895)	sqstm1 (ENSOMYG00000044911)	ENSOMYG00000048178	TBC1D9B (ENSOMYG00000044940)	rnf130 (ENSOMYG00000045010)	ENSOMYG00000052242	ENSOMYG00000053921 ##19	lect2 (ENSOMYG00000045057)	ENSOMYG00000045077	ENSOMYG00000076386	ENSOMYG00000035965	ENSOMYG00000055981	ENSOMYG00000050174	zgc:77938 (ENSOMYG00000061228)	pitx2 (ENSOMYG00000036024)	ELOVL6 (ENSOMYG00000012010)	egf (ENSOMYG00000036285)	lrit3a (ENSOMYG00000037605)	gpm6aa (ENSOMYG00000037664)	asb5a (ENSOMYG00000037726)	ENSOMYG00000039197	TDO2 (ENSOMYG00000064144)
Oncorhynchus_a	ANCESTRAL SPECIES	40	ENSGT00940000166497.a	ENSGT00950000183135.B.a.b.j	ENSGT00940000167144.c	ENSGT00940000159024.d	ENSGT00940000157266.b.d	ENSGT00940000160403.c	ENSGT00940000153137.a.b	ENSGT00940000160738.n	ENSGT00950000183201.b.b.b.a.f	ENSGT00950000182915.a.a.a.j	ENSGT00940000156526.a.m	ENSGT00390000002781.k	ENSGT00390000006124	ENSGT00940000158554.a	ENSGT00940000157465.o.b	ENSGT01050000244840.A.b.a.e ##19	ENSGT00390000015484.i.m	ENSGT00940000156665.a.c	ENSGT00940000164379.e.b.m.b	ENSGT00730000111223.m	ENSGT01050000247341	ENSGT00940000162789	ENSGT01050000244965.b.c.a	ENSGT00940000158366	ENSGT00940000156627.a.e	ENSGT00390000006915.d.j.b.a	ENSGT00940000165522.a.e	ENSGT01030000234566.e.b.a.a.a.b.h	ENSGT00390000008593.a.e	ENSGT00940000158645.f	ENSGT00940000156344.b.b
Chinook salmon	MODERN SPECIES	32	lbx2 (ENSOTSG00005043610)	nanos1 (ENSOTSG00005043611)	ap1ar (ENSOTSG00005043613)	gabra4 (ENSOTSG00005043614)	GABRA2 (ENSOTSG00005043617)	PCDH12 (ENSOTSG00005044101)	ENSOTSG00005044103	LTC4S (ENSOTSG00005044104)	MAML1 (ENSOTSG00005044106)	canx (ENSOTSG00005044108)	mgat4b (ENSOTSG00005044114)	sqstm1 (ENSOTSG00005044199)	mrnip (ENSOTSG00005044200)	TBC1D9B (ENSOTSG00005044202)	rnf130 (ENSOTSG00005044448)	F2RL3 (ENSOTSG00005044582) ##19	lect2.1 (ENSOTSG00005044586)	ENSOTSG00005044588	LINGO2 (ENSOTSG00005044589)	ENSOTSG00005044590	gar1 (ENSOTSG00005044591)	ENSOTSG00005044592	pitx2 (ENSOTSG00005044593)	elovl6 (ENSOTSG00005044595)	egf (ENSOTSG00005044598)	lrit3a (ENSOTSG00005044681)	gpm6aa (ENSOTSG00005044682)	asb5a (ENSOTSG00005044732)	ENSOTSG00005044737	PDGFC (ENSOTSG00005044909)	glrbb (ENSOTSG00005044910)
Coho salmon	MODERN SPECIES	6	lbx2 (ENSOKIG00005030531)	nanos1 (ENSOKIG00005030552)	ap1ar (ENSOKIG00005030570)	ENSOKIG00005030585	gabra4 (ENSOKIG00005004238)	GABRA2 (ENSOKIG00005004415)	PCDH12 (ENSOKIG00005004873)	ENSOKIG00005004877	ENSOKIG00005004900	MAML1 (ENSOKIG00005004965)	mgat4b (ENSOKIG00005005139)	sqstm1 (ENSOKIG00005005419)	mrnip (ENSOKIG00005005431)	TBC1D9B (ENSOKIG00005005449)	rnf130 (ENSOKIG00005005604)	F2RL3 (ENSOKIG00005005704) ##19	ENSOKIG00005005707	ENSOKIG00005005714	LINGO2 (ENSOKIG00005005755)	ENSOKIG00005005772	GAR1 (ENSOKIG00005005832)	ENSOKIG00005005835	PITX2 (ENSOKIG00005005849)	elovl6 (ENSOKIG00005005872)	egf (ENSOKIG00005005902)	lrit3a (ENSOKIG00005006038)	gpm6aa (ENSOKIG00005006056)	asb5a (ENSOKIG00005006217)	TENM3 (ENSOKIG00005006535)	TDO2 (ENSOKIG00005012563)	PDGFC (ENSOKIG00005012637)
Salmoninae	ANCESTRAL SPECIES	367	ENSGT00940000159651.e	ENSGT00940000166497.b	ENSGT00950000183135.B.a.b.i.a	ENSGT00940000167144.d	ENSGT00940000159024.c	ENSGT00940000157266.b.c	ENSGT00550000074940	ENSGT00940000160403.d	ENSGT00940000160738.m	ENSGT00950000183201.b.b.b.a.e	ENSGT00950000182915.a.a.a.i	ENSGT00940000156526.a.n	ENSGT00390000002781.l	ENSGT00940000158554.b	ENSGT00940000157465.o.a	ENSGT01050000244840.A.b.a.f ##19	ENSGT00390000015484.i.n	ENSGT00940000156665.a.d
Salmoninae_a	ANCESTRAL SPECIES	18	ENSGT00940000159651.e	ENSGT00940000166497.b	ENSGT00950000183135.B.a.b.i.a	ENSGT00940000167144.d	ENSGT00940000159024.c	ENSGT00940000157266.b.c	ENSGT00550000074940	ENSGT00940000160403.d	ENSGT00940000160738.m	ENSGT00950000183201.b.b.b.a.e	ENSGT00950000182915.a.a.a.i	ENSGT00940000156526.a.n	ENSGT00390000002781.l	ENSGT00940000158554.b	ENSGT00940000157465.o.a	ENSGT01050000244840.A.b.a.f ##19	ENSGT00390000015484.i.n	ENSGT00940000156038.a.a.d.b.b.a.b	ENSGT00940000156665.a.d	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b.m.a	ENSGT00730000111223.n	ENSGT00940000154518.a.h	ENSGT01050000244965.b.c.b	ENSGT00940000156627.a.f	ENSGT00390000006915.d.j.b.b	ENSGT00910000144159.B	ENSGT00940000165522.a.f	ENSGT00940000153230.A	ENSGT00950000183045.C	ENSGT01030000234566.e.b.a.a.a.b.g
Salmo	ANCESTRAL SPECIES	24	ENSGT00940000159651.e	ENSGT00940000166497.b	ENSGT00950000183135.B.a.b.i.a	ENSGT00940000167144.d	ENSGT00940000159024.c	ENSGT00940000157266.b.c	ENSGT00550000074940	ENSGT00940000160403.d	ENSGT00940000160738.m	ENSGT00950000183201.b.b.b.a.e	ENSGT00950000182915.a.a.a.i	ENSGT00940000156526.a.n	ENSGT00390000002781.l	ENSGT00940000158554.b	ENSGT00940000157465.o.a	ENSGT01050000244840.A.b.a.f ##19	ENSGT00390000015484.i.n	ENSGT00940000156038.a.a.d.b.b.a.b	ENSGT00940000156665.a.d	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b.m.a	ENSGT00730000111223.n	ENSGT00940000154518.a.h	ENSGT01050000244965.b.c.b	ENSGT00940000158366.p	ENSGT00940000156627.a.f	ENSGT00390000006915.d.j.b.b	ENSGT00910000144159.B	ENSGT00940000165522.a.f	ENSGT00940000153230.A	ENSGT00950000183045.C
River trout	MODERN SPECIES	22	lbx2 (ENSSTUG00000042316)	nanos1 (ENSSTUG00000042291)	ap1ar (ENSSTUG00000042269)	gabra4 (ENSSTUG00000042200)	GABRA2 (ENSSTUG00000042105)	GUF1 (ENSSTUG00000040706)	PCDH12 (ENSSTUG00000040613)	LTC4S (ENSSTUG00000040592)	ENSSTUG00000040574	canx (ENSSTUG00000040523)	mgat4b (ENSSTUG00000039183)	sqstm1 (ENSSTUG00000039128)	ENSSTUG00000039125	TBC1D9B (ENSSTUG00000034913)	rnf130 (ENSSTUG00000034687)	F2RL3 (ENSSTUG00000034679) ##19	ENSSTUG00000034653	ENSSTUG00000034641	LINGO2 (ENSSTUG00000034630)	ENSSTUG00000034624	eif4ea (ENSSTUG00000034607)	ENSSTUG00000034362	gar1 (ENSSTUG00000034345)	pitx2 (ENSSTUG00000034307)	elovl6 (ENSSTUG00000034288)	ENSSTUG00000034271	lrit3a (ENSSTUG00000034257)	gpm6aa (ENSSTUG00000034224)	spata4 (ENSSTUG00000034202)	asb5a (ENSSTUG00000034195)	neil3 (ENSSTUG00000034177)
Atlantic salmon	MODERN SPECIES	24	lbx2 (ENSSSAG00000116761)	nanos1 (ENSSSAG00000108324)	ap1ar (ENSSSAG00000076488)	gabra4 (ENSSSAG00000076474)	ENSSSAG00000087846	ENSSSAG00000076466	guf1 (ENSSSAG00000076202)	ENSSSAG00000076189	LTC4S (ENSSSAG00000089536)	ENSSSAG00000076182	canx (ENSSSAG00000076158)	mgat4b (ENSSSAG00000076123)	sqstm1 (ENSSSAG00000076115)	TBC1D9B (ENSSSAG00000076038)	rnf130 (ENSSSAG00000076016)	ENSSSAG00000076013 ##19	ENSSSAG00000076003	ENSSSAG00000118276	ENSSSAG00000075996	ENSSSAG00000082752	adhx (ENSSSAG00000074737)	ENSSSAG00000101189	pitx2 (ENSSSAG00000102092)	elovl6 (ENSSSAG00000074658)	lrit3a (ENSSSAG00000098899)	gpm6aa (ENSSSAG00000074628)	spata4 (ENSSSAG00000095061)	asb5a (ENSSSAG00000072832)	neil3 (ENSSSAG00000074568)	aga (ENSSSAG00000074561)	TENM3 (ENSSSAG00000074527)
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000166497.b	ENSGT01100000265271	ENSGT00950000183135.B.a.b.i.a	ENSGT00940000167144.d	ENSGT00940000159024.c	ENSGT00940000157266.b.c	ENSGT00550000074940	ENSGT00940000160403.d	ENSGT00940000176194	ENSGT00950000183201.b.b.b.a.e	ENSGT00950000182915.a.a.a.i	ENSGT00940000156526.a.n	ENSGT00390000002781.l	ENSGT00940000158554.b	ENSGT00940000157465.o.a	ENSGT01050000244840.A.b.a.f ##19	ENSGT00390000015484.i.n	ENSGT00940000156038.a.a.d.b.b.a.b	ENSGT00940000156665.a.d	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b.m.a	ENSGT00730000111223.n	ENSGT00940000154518.a.h	ENSGT01050000244965.b.c.b	ENSGT00940000156627.a.f	ENSGT00390000006915.d.j.b.b	ENSGT00910000144159.B	ENSGT00940000165522.a.f	ENSGT00940000153230.A	ENSGT00950000183045.C.nb	ENSGT01030000234566.e.b.a.a.a.b.g
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000166497.b	ENSGT01100000265271	ENSGT00950000183135.B.a.b.i.a	ENSGT00940000167144.d	ENSGT00940000159024.c	ENSGT00940000157266.b.c	ENSGT00550000074940	ENSGT00940000160403.d	ENSGT00940000176194	ENSGT00950000183201.b.b.b.a.e	ENSGT00950000182915.a.a.a.i	ENSGT00940000156526.a.n	ENSGT00390000002781.l	ENSGT00940000158554.b	ENSGT00940000157465.o.a	ENSGT01050000244840.A.b.a.f ##19	ENSGT00390000015484.i.n	ENSGT00940000156038.a.a.d.b.b.a.b	ENSGT00940000156665.a.d	ENSGT00940000154194.c.a	ENSGT00940000164379.e.b.m.a	ENSGT00730000111223.n	ENSGT00940000154518.a.h	ENSGT01050000244965.b.c.b	ENSGT00940000156627.a.f	ENSGT00390000006915.d.j.b.b	ENSGT00910000144159.B	ENSGT00940000165522.a.f	ENSGT00940000153230.A	ENSGT00950000183045.C.nb	ENSGT01030000234566.e.b.a.a.a.b.g
Coho salmon	MODERN SPECIES	10	lbx2 (ENSOKIG00005034476)	ENSOKIG00005034487	nanos1 (ENSOKIG00005034503)	ap1ar (ENSOKIG00005034520)	gabra4 (ENSOKIG00005034531)	GABRA2 (ENSOKIG00005034571)	GUF1 (ENSOKIG00005035293)	PCDH12 (ENSOKIG00005036097)	ENSOKIG00005036115	MAML1 (ENSOKIG00005036142)	canx (ENSOKIG00005036172)	mgat4b (ENSOKIG00005036327)	sqstm1 (ENSOKIG00005038304)	TBC1D9B (ENSOKIG00005038477)	rnf130 (ENSOKIG00005041817)	F2RL3 (ENSOKIG00005042060) ##19	ENSOKIG00005042073	ENSOKIG00005042152	LINGO2 (ENSOKIG00005042223)	eif4ea (ENSOKIG00005042234)	ENSOKIG00005005956	gar1 (ENSOKIG00005006459)	pitx2 (ENSOKIG00005006469)	ELOVL6 (ENSOKIG00005006494)	lrit3a (ENSOKIG00005006501)	gpm6aa (ENSOKIG00005006513)	spata4 (ENSOKIG00005006581)	asb5a (ENSOKIG00005006609)	neil3 (ENSOKIG00005006944)	aga (ENSOKIG00005006966)	TENM3 (ENSOKIG00005007193)
Chinook salmon	MODERN SPECIES	13	lbx2 (ENSOTSG00005044763)	nanos1 (ENSOTSG00005044764)	ENSOTSG00005044765	ap1ar (ENSOTSG00005044767)	gabra4 (ENSOTSG00005044768)	GABRA2 (ENSOTSG00005044770)	GUF1 (ENSOTSG00005045033)	PCDH12 (ENSOTSG00005045270)	ENSOTSG00005045271	MAML1 (ENSOTSG00005045272)	canx (ENSOTSG00005045278)	mgat4b (ENSOTSG00005045367)	sqstm1 (ENSOTSG00005045547)	TBC1D9B (ENSOTSG00005045553)	rnf130 (ENSOTSG00005045647)	F2RL3 (ENSOTSG00005045648) ##19	ENSOTSG00005045649	ENSOTSG00005045650	LINGO2 (ENSOTSG00005045651)	eif4ea (ENSOTSG00005045652)	ENSOTSG00005045657	gar1 (ENSOTSG00005045676)	pitx2 (ENSOTSG00005045677)	elovl6 (ENSOTSG00005045678)	lrit3a (ENSOTSG00005045680)	gpm6aa (ENSOTSG00005045681)	spata4 (ENSOTSG00005045685)	asb5a (ENSOTSG00005045686)	neil3 (ENSOTSG00005045811)	aga (ENSOTSG00005045814)	ENSOTSG00005045827
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000052017	nanos1 (ENSOMYG00000004577)	ap1ar (ENSOMYG00000004627)	gabra4 (ENSOMYG00000004656)	ENSOMYG00000049825	ENSOMYG00000004777	ENSOMYG00000005528	ENSOMYG00000006023	ENSOMYG00000006037	ENSOMYG00000006057	canx (ENSOMYG00000006488)	mgat4b (ENSOMYG00000006797)	sqstm1 (ENSOMYG00000006893)	TBC1D9B (ENSOMYG00000008326)	RNF130 (ENSOMYG00000010945)	ENSOMYG00000011201 ##19	ENSOMYG00000011205	ENSOMYG00000011228	ENSOMYG00000011269	ENSOMYG00000011286	ENSOMYG00000011377	ENSOMYG00000011968	ENSOMYG00000066294	ENSOMYG00000065623	pitx2 (ENSOMYG00000061049)	elovl6 (ENSOMYG00000069885)	ENSOMYG00000055862	ENSOMYG00000074044	lrit3a (ENSOMYG00000012020)	gpm6aa (ENSOMYG00000012041)	ENSOMYG00000058092
Huchen	MODERN SPECIES	1013											gnb5a (ENSHHUG00000049981)	ENSHHUG00000049936	fads2 (ENSHHUG00000049884)	ENSHHUG00000049876	ENSHHUG00000049872	F2RL3 (ENSHHUG00000049870) ##19	ENSHHUG00000049846	LINGO2 (ENSHHUG00000049826)
Northern pike	MODERN SPECIES	3	nanos1 (ENSELUG00000022032)	ap1ar (ENSELUG00000022014)	gabra4 (ENSELUG00000021980)	ENSELUG00000021951	GUF1 (ENSELUG00000021933)	PCDH12 (ENSELUG00000021877)	ENSELUG00000021868	LTC4S (ENSELUG00000021842)	MAML1 (ENSELUG00000021776)	canx (ENSELUG00000021763)	mgat4b (ENSELUG00000021707)	sqstm1 (ENSELUG00000021590)	ENSELUG00000026382	TBC1D9B (ENSELUG00000021561)	rnf130 (ENSELUG00000021452)	F2RL3 (ENSELUG00000021415) ##19	lect2 (ENSELUG00000030366)	ENSELUG00000021375	LINGO2 (ENSELUG00000021135)	eif4ea (ENSELUG00000021129)	ENSELUG00000021119	gar1 (ENSELUG00000021108)	pitx2 (ENSELUG00000021088)	ELOVL6 (ENSELUG00000028127)	egf (ENSELUG00000021028)	lrit3a (ENSELUG00000020941)	gpm6aa (ENSELUG00000020925)	spata4 (ENSELUG00000020902)	asb5a (ENSELUG00000020840)	neil3 (ENSELUG00000020834)	aga (ENSELUG00000020776)
Otomorpha	ANCESTRAL SPECIES	66	ENSGT00940000164983.c.a.a.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT01030000235223	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT01090000260190	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00390000000610	ENSGT00940000166590	ENSGT01060000253364	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00940000157645.f.c.a
Clupeiformes	ANCESTRAL SPECIES	725															ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000025817	ENSCHAG00000025813	DOCK2 (ENSCHAG00000024633)	hrh2a (ENSCHAG00000024515)	TLX3 (ENSCHAG00000024510)	KCNIP1 (ENSCHAG00000024486)	pmt (ENSCHAG00000024422)	zgc:152774 (ENSCHAG00000024414)	ENSCHAG00000024411	TBC1D9B (ENSCHAG00000024131)	ENSCHAG00000024104	rnf130 (ENSCHAG00000024044)	F2RL3 (ENSCHAG00000024032) ##19	F2RL3 (ENSCHAG00000024030) ##19	ENSCHAG00000024027 ##19	F2RL3 (ENSCHAG00000024022) ##19	lect2.1 (ENSCHAG00000024002)	ENSCHAG00000023989	ENSCHAG00000023908	hars (ENSCHAG00000023816)	tmco6 (ENSCHAG00000023793)	abhd18 (ENSCHAG00000023675)	rnf103 (ENSCHAG00000023654)	immt (ENSCHAG00000023348)	ptcd3 (ENSCHAG00000023293)	POLR1A (ENSCHAG00000021078)	ENSCHAG00000021000	sqstm1 (ENSCHAG00000020888)	mgat4b (ENSCHAG00000020498)	MAML1 (ENSCHAG00000020475)	ENSCHAG00000020469
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000025836	TRPC7 (ENSCHAG00000025820)	ENSCHAG00000025817	ENSCHAG00000025813	DOCK2 (ENSCHAG00000024633)	hrh2a (ENSCHAG00000024515)	TLX3 (ENSCHAG00000024510)	KCNIP1 (ENSCHAG00000024486)	pmt (ENSCHAG00000024422)	zgc:152774 (ENSCHAG00000024414)	ENSCHAG00000024411	TBC1D9B (ENSCHAG00000024131)	ENSCHAG00000024104	rnf130 (ENSCHAG00000024044)	F2RL3 (ENSCHAG00000024032) ##19	F2RL3 (ENSCHAG00000024030) ##19	ENSCHAG00000024027 ##19	F2RL3 (ENSCHAG00000024022) ##19	lect2.1 (ENSCHAG00000024002)	ENSCHAG00000023989	ENSCHAG00000023908	hars (ENSCHAG00000023816)	tmco6 (ENSCHAG00000023793)	abhd18 (ENSCHAG00000023675)	rnf103 (ENSCHAG00000023654)	immt (ENSCHAG00000023348)	ptcd3 (ENSCHAG00000023293)	POLR1A (ENSCHAG00000021078)	ENSCHAG00000021000	sqstm1 (ENSCHAG00000020888)	mgat4b (ENSCHAG00000020498)
Atlantic herring	MODERN SPECIES	12	DIAPH1 (ENSCHAG00000025849)	ENSCHAG00000025836	TRPC7 (ENSCHAG00000025820)	ENSCHAG00000025817	ENSCHAG00000025813	DOCK2 (ENSCHAG00000024633)	hrh2a (ENSCHAG00000024515)	TLX3 (ENSCHAG00000024510)	KCNIP1 (ENSCHAG00000024486)	pmt (ENSCHAG00000024422)	zgc:152774 (ENSCHAG00000024414)	ENSCHAG00000024411	TBC1D9B (ENSCHAG00000024131)	ENSCHAG00000024104	rnf130 (ENSCHAG00000024044)	F2RL3 (ENSCHAG00000024032) ##19	F2RL3 (ENSCHAG00000024030) ##19	ENSCHAG00000024027 ##19	F2RL3 (ENSCHAG00000024022) ##19	lect2.1 (ENSCHAG00000024002)	ENSCHAG00000023989	ENSCHAG00000023908	hars (ENSCHAG00000023816)	tmco6 (ENSCHAG00000023793)	abhd18 (ENSCHAG00000023675)	rnf103 (ENSCHAG00000023654)	immt (ENSCHAG00000023348)	ptcd3 (ENSCHAG00000023293)	POLR1A (ENSCHAG00000021078)	ENSCHAG00000021000	sqstm1 (ENSCHAG00000020888)
Atlantic herring	MODERN SPECIES	12	TRPC7 (ENSCHAG00000025820)	ENSCHAG00000025817	ENSCHAG00000025813	DOCK2 (ENSCHAG00000024633)	hrh2a (ENSCHAG00000024515)	TLX3 (ENSCHAG00000024510)	KCNIP1 (ENSCHAG00000024486)	pmt (ENSCHAG00000024422)	zgc:152774 (ENSCHAG00000024414)	ENSCHAG00000024411	TBC1D9B (ENSCHAG00000024131)	ENSCHAG00000024104	rnf130 (ENSCHAG00000024044)	F2RL3 (ENSCHAG00000024032) ##19	F2RL3 (ENSCHAG00000024030) ##19	ENSCHAG00000024027 ##19	F2RL3 (ENSCHAG00000024022) ##19	lect2.1 (ENSCHAG00000024002)	ENSCHAG00000023989	ENSCHAG00000023908	hars (ENSCHAG00000023816)	tmco6 (ENSCHAG00000023793)	abhd18 (ENSCHAG00000023675)	rnf103 (ENSCHAG00000023654)	immt (ENSCHAG00000023348)	ptcd3 (ENSCHAG00000023293)	POLR1A (ENSCHAG00000021078)	ENSCHAG00000021000	sqstm1 (ENSCHAG00000020888)	mgat4b (ENSCHAG00000020498)	MAML1 (ENSCHAG00000020475)
Denticle herring	MODERN SPECIES	9	hspa9 (ENSDCDG00000016992)	FOXO4 (ENSDCDG00000016782)	ENSDCDG00000016780	zgc:92907 (ENSDCDG00000016778)	rap2c (ENSDCDG00000016775)	MAP7D3 (ENSDCDG00000016761)	fhl1a (ENSDCDG00000016748)	ENSDCDG00000016747	slc9a6a (ENSDCDG00000016674)	mmgt1 (ENSDCDG00000016670)	RUFY1 (ENSDCDG00000015858)	hbegfa (ENSDCDG00000015806)	slu7 (ENSDCDG00000015459)	C1QTNF2 (ENSDCDG00000015439)	rnf130 (ENSDCDG00000014938)	F2RL3 (ENSDCDG00000014920) ##19	lect2.1 (ENSDCDG00000014919)	TBC1D9B (ENSDCDG00000014583)	ENSDCDG00000014543	pmt (ENSDCDG00000014536)	ENSDCDG00000014522	TLX3 (ENSDCDG00000014513)	hrh2a (ENSDCDG00000014511)	ENSDCDG00000014509	DOCK2 (ENSDCDG00000010414)	TRPC7 (ENSDCDG00000009794)	ENSDCDG00000009735	DIAPH1 (ENSDCDG00000006927)	ENSDCDG00000006307	ENSDCDG00000006267	ENSDCDG00000006246
Otophysi	ANCESTRAL SPECIES	293	ENSGT00940000176100	ENSGT00940000167634	ENSGT00940000154518.a	ENSGT01050000244965.b	ENSGT00940000158366	ENSGT00940000156627.a	ENSGT00390000006915.d.j.b	ENSGT00910000144159.B	ENSGT00940000165522.a	ENSGT00940000153230.A	ENSGT00950000183045.C	ENSGT01030000234566.e.b.a.a.a.b	ENSGT00390000008593.a	ENSGT00940000159253	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00940000157645.f.c.a
Characiphysae	ANCESTRAL SPECIES	117	ENSGT00940000155789.h	ENSGT01030000234598.a.b	ENSGT00940000153421.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00730000111202	ENSGT00940000155531.a.a	ENSGT00940000158154	ENSGT00940000161593.b	ENSGT01030000234960	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00390000008593.a	ENSGT00940000159253	ENSGT00940000157465.y	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a
Channel catfish	MODERN SPECIES	27	gpm6aa (ENSIPUG00000003487)	lrit3 (ENSIPUG00000003504)	egf (ENSIPUG00000003528)	elovl6 (ENSIPUG00000003619)	pitx2 (ENSIPUG00000003666)	ENSIPUG00000003705	ENSIPUG00000003775	ENSIPUG00000003792	tmem144b (ENSIPUG00000003830)	fam198b (ENSIPUG00000003876)	zgrf1 (ENSIPUG00000003935)	aga (ENSIPUG00000003971)	TENM3 (ENSIPUG00000004060)	ctso (ENSIPUG00000004102)	rnf130 (ENSIPUG00000004123)	F2RL3 (ENSIPUG00000004142) ##19	ENSIPUG00000004162	PCDH1 (ENSIPUG00000004175)
Characiphysae_b	ANCESTRAL SPECIES	125	ENSGT00940000155789.h	ENSGT01030000234598.a.b	ENSGT00940000153421.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00730000111202	ENSGT00940000155531.a.a	ENSGT00940000158154	ENSGT00940000161593.b	ENSGT01030000234960	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00390000008593.a	ENSGT00940000159253	ENSGT00940000157465.y	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a
Characoidei	ANCESTRAL SPECIES	264			ENSGT00940000153421.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00730000111202	ENSGT00940000155531.a.a	ENSGT00940000158154	ENSGT00940000161593.b	ENSGT01030000234960	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00390000008593.a	ENSGT00940000159253	ENSGT00940000157465.y	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a
Red-bellied piranha	MODERN SPECIES	27	tmem144b (ENSPNAG00000019845)	adh5l (ENSPNAG00000019866)	pitx2 (ENSPNAG00000003615)	elovl6 (ENSPNAG00000019912)	egf (ENSPNAG00000019917)	lrit3a (ENSPNAG00000019934)	gpm6aa (ENSPNAG00000019958)	spata4 (ENSPNAG00000019966)	asb5a (ENSPNAG00000019973)	neil3 (ENSPNAG00000019983)	aga (ENSPNAG00000019999)	TENM3 (ENSPNAG00000021169)	tdo2a (ENSPNAG00000021285)	CTSO (ENSPNAG00000021296)	rnf130 (ENSPNAG00000021324)	F2RL3 (ENSPNAG00000021338) ##19	lect2.1 (ENSPNAG00000021359)	ENSPNAG00000021379	ENSPNAG00000021389	ngfa (ENSPNAG00000021405)	ENSPNAG00000021455	slc25a55b (ENSPNAG00000021491)	TSHB (ENSPNAG00000021505)	ENSPNAG00000021509	ENSPNAG00000021513	ap4b1 (ENSPNAG00000021523)	BLTP3A (ENSPNAG00000021546)	taf11 (ENSPNAG00000021557)	ANKS1A (ENSPNAG00000021680)	safb (ENSPNAG00000021838)	ENSPNAG00000021890
Mexicana tetra	MODERN SPECIES	16	pitx2 (ENSAMXG00000036432)	elovl6 (ENSAMXG00000037372)	ENSAMXG00000041385	ENSAMXG00000037193	lrit3a (ENSAMXG00000041737)	gpm6aa (ENSAMXG00000015426)	spata4 (ENSAMXG00000015408)	asb5a (ENSAMXG00000043756)	neil3 (ENSAMXG00000015365)	aga (ENSAMXG00000015342)	ENSAMXG00000015239	tdo2a (ENSAMXG00000032882)	CTSO (ENSAMXG00000037835)	rnf130 (ENSAMXG00000015143)	ENSAMXG00000040420	F2RL3 (ENSAMXG00000031906) ##19	lect2.1 (ENSAMXG00000015073)	ENSAMXG00000038166	ENSAMXG00000031625	ENSAMXG00000029582	ENSAMXG00000038380	PCDH1 (ENSAMXG00000002124)	met (ENSAMXG00000002094)	ENSAMXG00000002072	ENSAMXG00000002068	ENSAMXG00000002058	NT5DC3 (ENSAMXG00000033802)	uqcc6 (ENSAMXG00000040996)	TDG (ENSAMXG00000002041)	tdg.1 (ENSAMXG00000029149)	ENSAMXG00000002021
Electric eel	MODERN SPECIES	216			pitx2 (ENSEEEG00000006380)	elovl6 (ENSEEEG00000006382)	egf (ENSEEEG00000006384)	lrit3a (ENSEEEG00000006386)	gpm6aa (ENSEEEG00000006389)	spata4 (ENSEEEG00000006404)	asb5a (ENSEEEG00000006408)	neil3 (ENSEEEG00000006410)	aga (ENSEEEG00000006411)	TENM3 (ENSEEEG00000006416)	tdo2a (ENSEEEG00000006429)	CTSO (ENSEEEG00000006431)	rnf130 (ENSEEEG00000006432)	F2RL3 (ENSEEEG00000006434) ##19	lect2.1 (ENSEEEG00000006436)	ENSEEEG00000006438	ENSEEEG00000006440	ENSEEEG00000006442	ENSEEEG00000006444	PCDH1 (ENSEEEG00000006445)
Cyprinoidei	ANCESTRAL SPECIES	31	ENSGT00940000167634.c	ENSGT00940000167634.d	ENSGT00940000154518.a	ENSGT01050000244965.b	ENSGT00940000158366	ENSGT00940000156627.a	ENSGT00390000006915.d.j.b	ENSGT00910000144159.B	ENSGT00940000165522.a	ENSGT00940000153230.A	ENSGT00950000183045.C	ENSGT01030000234566.e.b.a.a.a.b	ENSGT00390000008593.a	ENSGT00940000159253	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a	ENSGT00940000157645.f.d	ENSGT00390000013163	ENSGT00940000153700	ENSGT01100000265270	ENSGT00940000153909.b	ENSGT00940000178312	ENSGT00510000047951	ENSGT00940000154808.a.b.j.b	ENSGT00940000167175	ENSGT00940000165646.B	ENSGT00940000156986	ENSGT00390000004029	ENSGT00940000154661
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	454																ENSGT01050000244840.A.b.a.i ##19	ENSGT00390000015484.i.r	ENSGT00940000155521.a.a.b	ENSGT00390000013163.d	ENSGT00940000153700.d	ENSGT01100000265270	ENSGT00940000153909.b.a	ENSGT00510000047951.m.b	ENSGT00940000153147.a.a.a.a.a	ENSGT00510000047951.m.a	ENSGT00940000154808.a.b.j.b	ENSGT00940000167175	ENSGT00940000156986.o	ENSGT00390000004029.f	ENSGT00940000154661.d	ENSGT00940000164465.c
Cyprininae_a	ANCESTRAL SPECIES	706													ENSGT00390000008593.a.m.a	ENSGT00940000159253.d	ENSGT00940000157465.`b	ENSGT01050000244840.A.b.a.i ##19	ENSGT00390000015484.i.r	ENSGT00940000155521.a.a.b
Golden-line barbel	MODERN SPECIES	1145												TENM3 (ENSSGRG00000007035)	tdo2a (ENSSGRG00000007677)	CTSO (ENSSGRG00000007684)	rnf130 (ENSSGRG00000007692)	F2RL3 (ENSSGRG00000007718) ##19	LECT2 (ENSSGRG00000007720)
Common carp reference	MODERN SPECIES	35	zgc:77938 (ENSCCRG00000062627)	pitx2 (ENSCCRG00000043209)	elovl6 (ENSCCRG00000075942)	egf (ENSCCRG00000043237)	lrit3a (ENSCCRG00000020127)	gpm6aa (ENSCCRG00000072724)	spata4 (ENSCCRG00000043598)	asb5a (ENSCCRG00000072217)	aga (ENSCCRG00000043616)	neil3 (ENSCCRG00000043608)	ENSCCRG00000026040	ENSCCRG00000082491	tdo2a (ENSCCRG00000027461)	rnf130 (ENSCCRG00000042574)	ENSCCRG00000042556	ENSCCRG00000042573 ##19	ENSCCRG00000063819	ENSCCRG00000052903	ENSCCRG00000068611	ENSCCRG00000073189	ENSCCRG00000018180	ENSCCRG00000007260	ENSCCRG00000007267	csnk1a1 (ENSCCRG00000068929)	spdl1 (ENSCCRG00000056503)	hnrnpa0b (ENSCCRG00000064384)	ENSCCRG00000055210	gsr (ENSCCRG00000078374)	uqcrq (ENSCCRG00000049292)	timm8a (ENSCCRG00000049294)	zgc:101583 (ENSCCRG00000037263)
Goldfish	MODERN SPECIES	5	slc9a6a (ENSCARG00000033038)	mmgt1 (ENSCARG00000037605)	ints6l (ENSCARG00000037947)	mospd1 (ENSCARG00000040770)	pabir2 (ENSCARG00000040783)	hprt1 (ENSCARG00000040850)	phf6 (ENSCARG00000041221)	cab39l1 (ENSCARG00000041246)	ENSCARG00000041262	ENSCARG00000041274	gpc3 (ENSCARG00000041283)	ENSCARG00000041294	tdo2a (ENSCARG00000041345)	CTSO (ENSCARG00000041963)	rnf130 (ENSCARG00000042021)	F2RL3 (ENSCARG00000042246) ##19	LECT2 (ENSCARG00000042273)	ENSCARG00000042310	PCDH1 (ENSCARG00000042329)	asah1a (ENSCARG00000042536)	ENSCARG00000045676	mtus1a (ENSCARG00000045721)	pdgfrl (ENSCARG00000045755)	slc7a2 (ENSCARG00000045774)	cnot7 (ENSCARG00000045857)	zdhhc2 (ENSCARG00000046089)	MICU3 (ENSCARG00000047234)	fgf20b (ENSCARG00000047492)	dctn4 (ENSCARG00000047506)	gpx3 (ENSCARG00000047707)	tnip1 (ENSCARG00000047775)
Cyprininae	ANCESTRAL SPECIES	947												ENSGT01030000234566.e.b.a.a.a.b.c	ENSGT00390000008593.a.m.b	ENSGT00940000159253.c	ENSGT00940000157465.ab	ENSGT01050000244840.A.b.a.j ##19	ENSGT00390000015484.i.q.a
Goldfish	MODERN SPECIES	2617				GASK1B (ENSCARG00000045791)	ENSCARG00000045771	pitx2 (ENSCARG00000045715)	elovl6 (ENSCARG00000045694)	lrit3a (ENSCARG00000045469)	gpm6aa (ENSCARG00000045404)	ENSCARG00000045282	asb5a (ENSCARG00000045235)	ENSCARG00000041695	tdo2a (ENSCARG00000041269)	CTSO (ENSCARG00000041241)	rnf130 (ENSCARG00000041107)	F2RL3 (ENSCARG00000041076) ##19	LECT2 (ENSCARG00000041043)	ENSCARG00000040966
Cyprininae_a	ANCESTRAL SPECIES	529					ENSGT00940000154518.a.f	ENSGT01050000244965.b.b	ENSGT00940000158366.s	ENSGT00940000156627.a.d	ENSGT00390000006915.d.j.b.d	ENSGT00910000144159.B.f	ENSGT00940000165522.a.b	ENSGT01030000234566.e.b.a.a.a.b.c	ENSGT00390000008593.a.m.b	ENSGT00940000159253.c	ENSGT00940000157465.ab	ENSGT01050000244840.A.b.a.j ##19	ENSGT00390000015484.i.q.a
Golden-line barbel	MODERN SPECIES	840											TENM3 (ENSSGRG00000046751)	ENSSGRG00000046746	tdo2a (ENSSGRG00000046702)	ENSSGRG00000046691	rnf130 (ENSSGRG00000046687)	F2RL3 (ENSSGRG00000046685) ##19	LECT2 (ENSSGRG00000046682)	ENSSGRG00000046681
Common carp reference	MODERN SPECIES	20	tmem144b (ENSCCRG00000023536)	ENSCCRG00000056470	pitx2 (ENSCCRG00000078107)	ELOVL6 (ENSCCRG00000043218)	egf (ENSCCRG00000020133)	lrit3a (ENSCCRG00000066994)	gpm6aa (ENSCCRG00000020171)	spata4 (ENSCCRG00000025862)	asb5a (ENSCCRG00000058866)	neil3 (ENSCCRG00000064049)	ENSCCRG00000036898	ENSCCRG00000033857	ENSCCRG00000077911	tdo2a (ENSCCRG00000033847)	rnf130 (ENSCCRG00000005301)	ENSCCRG00000040196 ##19	ENSCCRG00000070528	ENSCCRG00000040098	ENSCCRG00000059894	ENSCCRG00000079623	ENSCCRG00000021163	ENSCCRG00000049563	csnk1a1 (ENSCCRG00000030809)	ENSCCRG00000026204	spdl1 (ENSCCRG00000037245)	ENSCCRG00000053381	spdl1 (ENSCCRG00000026244)	ENSCCRG00000065960	gsr (ENSCCRG00000048837)	uqcrq (ENSCCRG00000064290)	timm8a (ENSCCRG00000025680)
Zebrafish	MODERN SPECIES	5	adh5l (ENSDARG00000087262)	zgc:77938 (ENSDARG00000088366)	pitx2 (ENSDARG00000036194)	elovl6 (ENSDARG00000004402)	egf (ENSDARG00000052739)	lrit3a (ENSDARG00000055463)	gpm6aa (ENSDARG00000055455)	spata4 (ENSDARG00000036189)	asb5a (ENSDARG00000097938)	neil3 (ENSDARG00000020079)	aga (ENSDARG00000004889)	ENSDARG00000087599	tdo2a (ENSDARG00000071429)	CTSO (ENSDARG00000052855)	rnf130 (ENSDARG00000089767)	F2RL3 (ENSDARG00000079399) ##19	lect2.1 (ENSDARG00000033227)	LECT2 (ENSDARG00000090889)	ENSDARG00000086483	PCDH1 (ENSDARG00000036175)	rnasel3 (ENSDARG00000036171)	FBXO38 (ENSDARG00000006924)	csnk1a1 (ENSDARG00000052674)	si:ch211-195b11.3 (ENSDARG00000100582)	SIL1 (ENSDARG00000100564)	spdl1 (ENSDARG00000103996)	hnrnpa0b (ENSDARG00000036162)	hnrnpa0l (ENSDARG00000036161)	gsr (ENSDARG00000019236)	uqcrq (ENSDARG00000029064)	timm8a (ENSDARG00000023672)
Osteoglossiformes	ANCESTRAL SPECIES	55	ENSGT01060000248588.a.c.a	ENSGT00940000158371	ENSGT00940000166070	ENSGT00390000002137	ENSGT00940000155317.a.b	ENSGT00940000160403	ENSGT00940000153137.a.b	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a ##19	ENSGT00390000015484.i	ENSGT00940000155521.a.a
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	39	SPOCK1 (ENSPKIG00000015769)	bicc2 (ENSPKIG00000015555)	ENSPKIG00000015505	ENSPKIG00000015463	PCDH12 (ENSPKIG00000015442)	ENSPKIG00000015426	LTC4S (ENSPKIG00000015412)	MAML1 (ENSPKIG00000015388)	canx (ENSPKIG00000015357)	mgat4b (ENSPKIG00000015283)	ENSPKIG00000015251	sqstm1 (ENSPKIG00000015230)	ENSPKIG00000015209	TBC1D9B (ENSPKIG00000015082)	rnf130 (ENSPKIG00000014920)	F2RL3 (ENSPKIG00000014856) ##19
P. kingsleyae	MODERN SPECIES	1079																F2RL3 (ENSPKIG00000009355) ##19	F2RL3 (ENSPKIG00000009368) ##19
P. kingsleyae	MODERN SPECIES	128															ENSPKIG00000013518	F2RL3 (ENSPKIG00000013535) ##19	lect2.1 (ENSPKIG00000013555)	ENSPKIG00000013581	PCDH1 (ENSPKIG00000013631)	kctd12b (ENSPKIG00000013680)	ENSPKIG00000013706	znf711 (ENSPKIG00000013756)	KCNK4 (ENSPKIG00000013825)	ENSPKIG00000013952	zgc:162144 (ENSPKIG00000014001)	stx5al (ENSPKIG00000014020)	ENSPKIG00000014119	dnajc4 (ENSPKIG00000014195)	nudt22 (ENSPKIG00000014224)	adssl (ENSPKIG00000014244)	ENSPKIG00000014274
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	1079															F2RL3 (ENSPKIG00000009355) ##19	F2RL3 (ENSPKIG00000009368) ##19
P. kingsleyae	MODERN SPECIES	1461																F2RL3 (ENSPKIG00000024400) ##19
Asian bonytongue	MODERN SPECIES	4	DIAPH1 (ENSSFOG00015003268)	ENSSFOG00015003255	TRPC7 (ENSSFOG00015005871)	SPOCK1 (ENSSFOG00015003145)	bicc2 (ENSSFOG00015003080)	ENSSFOG00015003066	PCDH12 (ENSSFOG00015003061)	LTC4S (ENSSFOG00015031429)	MAML1 (ENSSFOG00015030618)	canx (ENSSFOG00015002970)	mgat4b (ENSSFOG00015002873)	sqstm1 (ENSSFOG00015002854)	ENSSFOG00015002861	TBC1D9B (ENSSFOG00015002823)	rnf130 (ENSSFOG00015002791)	F2RL3 (ENSSFOG00015002782) ##19	lect2.1 (ENSSFOG00015002754)	ENSSFOG00015002714	PCDH1 (ENSSFOG00015002669)	rnasel3 (ENSSFOG00015002656)	ENSSFOG00015002638	ENSSFOG00015008105	ENSSFOG00015002535	ENSSFOG00015017823	ENSSFOG00015002258	ENSSFOG00015002193	ENSSFOG00015002040	ENSSFOG00015001964	ENSSFOG00015001919	ENSSFOG00015001888	ENSSFOG00015001801
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	672	TRPC7 (ENSLOCG00000011343)	SPOCK1 (ENSLOCG00000011355)	bicc2 (ENSLOCG00000011365)	ENSLOCG00000011380	ENSLOCG00000011390	ENSLOCG00000011398	PCDH12 (ENSLOCG00000011407)	LTC4S (ENSLOCG00000011416)	MAML1 (ENSLOCG00000011427)	canx (ENSLOCG00000011437)	mgat4b (ENSLOCG00000011450)	sqstm1 (ENSLOCG00000011462)	ENSLOCG00000011470	TBC1D9B (ENSLOCG00000011473)	rnf130 (ENSLOCG00000011483)	F2RL3 (ENSLOCG00000011493) ##19	lect2.1 (ENSLOCG00000011500)	PCDH1 (ENSLOCG00000011506)	smad5 (ENSLOCG00000011514)	tgfbi (ENSLOCG00000011520)	ENSLOCG00000011527	ARAP3 (ENSLOCG00000011534)	ENSLOCG00000011550 ##19	NEUROG1 (ENSLOCG00000011560)	ENSLOCG00000011563	ENSLOCG00000011570	ENSLOCG00000011587	ENSLOCG00000011597	ENSLOCG00000011605	thoc3 (ENSLOCG00000011610)	cplx2 (ENSLOCG00000011618)
Spotted gar	MODERN SPECIES	672	mtnr1al (ENSLOCG00000011690)	SLC36A1 (ENSLOCG00000011680)	atox1 (ENSLOCG00000011673)	sparc (ENSLOCG00000011666)	g3bp1 (ENSLOCG00000011657)	glra1 (ENSLOCG00000011646)	slc25a48 (ENSLOCG00000011632)	cplx2 (ENSLOCG00000011618)	thoc3 (ENSLOCG00000011610)	ENSLOCG00000011605	ENSLOCG00000011597	ENSLOCG00000011587	ENSLOCG00000011570	ENSLOCG00000011563	NEUROG1 (ENSLOCG00000011560)	ENSLOCG00000011550 ##19	ARAP3 (ENSLOCG00000011534)	ENSLOCG00000011527	tgfbi (ENSLOCG00000011520)	smad5 (ENSLOCG00000011514)	PCDH1 (ENSLOCG00000011506)	lect2.1 (ENSLOCG00000011500)	F2RL3 (ENSLOCG00000011493) ##19	rnf130 (ENSLOCG00000011483)	TBC1D9B (ENSLOCG00000011473)	ENSLOCG00000011470	sqstm1 (ENSLOCG00000011462)	mgat4b (ENSLOCG00000011450)	canx (ENSLOCG00000011437)	MAML1 (ENSLOCG00000011427)	LTC4S (ENSLOCG00000011416)
Reedfish	DUPLICATION
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	2	BOD1 (ENSECRG00000012812)	CPEB4 (ENSECRG00000012778)	nsg2 (ENSECRG00000012742)	MSX2 (ENSECRG00000012727)	drd1b (ENSECRG00000012720)	ublcp1 (ENSECRG00000012695)	rnf145b (ENSECRG00000012658)	ENSECRG00000012625	ebf3a (ENSECRG00000012609)	clint1a (ENSECRG00000012588)	LSM11 (ENSECRG00000012570)	thg1l (ENSECRG00000012548)	ENSECRG00000012360	TBC1D9B (ENSECRG00000012193)	rnf130 (ENSECRG00000012143)	F2RL3 (ENSECRG00000012122) ##19	ENSECRG00000012105 ##19	ENSECRG00000012083	ENSECRG00000012066	ENSECRG00000012052	PCDH1 (ENSECRG00000012042)	ENSECRG00000011989	ENSECRG00000011972	ENSECRG00000011959	smad5 (ENSECRG00000011934)	tgfbi (ENSECRG00000011899)	ENSECRG00000011855	ENSECRG00000011807	ENSECRG00000011786 ##19	NEUROG1 (ENSECRG00000011773)	ENSECRG00000011764
Reedfish	MODERN SPECIES	2	CPEB4 (ENSECRG00000012778)	nsg2 (ENSECRG00000012742)	MSX2 (ENSECRG00000012727)	drd1b (ENSECRG00000012720)	ublcp1 (ENSECRG00000012695)	rnf145b (ENSECRG00000012658)	ENSECRG00000012625	ebf3a (ENSECRG00000012609)	clint1a (ENSECRG00000012588)	LSM11 (ENSECRG00000012570)	thg1l (ENSECRG00000012548)	ENSECRG00000012360	TBC1D9B (ENSECRG00000012193)	rnf130 (ENSECRG00000012143)	F2RL3 (ENSECRG00000012122) ##19	ENSECRG00000012105 ##19	ENSECRG00000012083	ENSECRG00000012066	ENSECRG00000012052	PCDH1 (ENSECRG00000012042)	ENSECRG00000011989	ENSECRG00000011972	ENSECRG00000011959	smad5 (ENSECRG00000011934)	tgfbi (ENSECRG00000011899)	ENSECRG00000011855	ENSECRG00000011807	ENSECRG00000011786 ##19	NEUROG1 (ENSECRG00000011773)	ENSECRG00000011764	ENSECRG00000011739
Reedfish	MODERN SPECIES	2	atox1 (ENSECRG00000011415)	sparc (ENSECRG00000011430)	g3bp1 (ENSECRG00000011454)	glra1 (ENSECRG00000011489)	slc25a48 (ENSECRG00000011527)	ENSECRG00000011543	thoc3 (ENSECRG00000011561)	ENSECRG00000011577	ENSECRG00000011603	ENSECRG00000011646	ENSECRG00000011671	ENSECRG00000011704	ENSECRG00000011739	ENSECRG00000011764	NEUROG1 (ENSECRG00000011773)	ENSECRG00000011786 ##19	ENSECRG00000011807	ENSECRG00000011855	tgfbi (ENSECRG00000011899)	smad5 (ENSECRG00000011934)	ENSECRG00000011959	ENSECRG00000011972	ENSECRG00000011989	PCDH1 (ENSECRG00000012042)	ENSECRG00000012052	ENSECRG00000012066	ENSECRG00000012083	ENSECRG00000012105 ##19	F2RL3 (ENSECRG00000012122) ##19	rnf130 (ENSECRG00000012143)	TBC1D9B (ENSECRG00000012193)
Sarcopterygii	ANCESTRAL SPECIES	666																ENSGT01050000244840.A.b.a ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00940000155521
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2286																ENSLACG00000007932 ##19	ARRDC2 (ENSLACG00000003637)
Coelacanth	MODERN SPECIES	3144																ENSLACG00000005173 ##19	SIN3B (ENSLACG00000001224)
Coelacanth	MODERN SPECIES	140																ENSLACG00000000072 ##19
Coelacanth	MODERN SPECIES	3479																ENSLACG00000002719 ##19	ENSLACG00000004272
Coelacanth	MODERN SPECIES	476	DIAPH1 (ENSLACG00000008375)	hdac3 (ENSLACG00000009761)	ENSLACG00000010113	FCHSD1 (ENSLACG00000010262)	ENSLACG00000010673	MAML1 (ENSLACG00000010918)	CANX (ENSLACG00000011213)	ENSLACG00000011565	PCDH12 (ENSLACG00000011665)	ENSLACG00000011904	ENSLACG00000011951	ENSLACG00000012057	ENSLACG00000012135	SQSTM1 (ENSLACG00000012177)	MGAT4B (ENSLACG00000012591)	ENSLACG00000012866 ##19	ARAP3 (ENSLACG00000012937)	ENSLACG00000013425	PCDH1 (ENSLACG00000015969)
Tetrapoda	ANCESTRAL SPECIES	116	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES	125					ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000168675	ENSGT00940000159560	ENSGT01050000244840.A.b.a.s ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00390000016934	ENSGT00530000063974.a	ENSGT00940000160748	ENSGT00940000165052	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00940000154396.a	ENSGT00940000159134.w.a	ENSGT00940000160489
Frog	MODERN SPECIES		ENSXETG00000042436	rflcii (ENSXETG00000038097)	jak3 (ENSXETG00000016438)	slc5a5 (ENSXETG00000013546)	ccdc124 (ENSXETG00000013543)	kcnn1 (ENSXETG00000013542)	ocel1 (ENSXETG00000013539)	ocel1.2 (ENSXETG00000013536)	nr2f6 (ENSXETG00000013531)	ENSXETG00000046959	babam1 (ENSXETG00000025571)	insr (ENSXETG00000013518)	use1 (ENSXETG00000013513)	nwd1 (ENSXETG00000038824)	sin3b (ENSXETG00000013501)	f2rl3 (ENSXETG00000013500) ##19	cpamd8 (ENSXETG00000032091)	haus8 (ENSXETG00000033040)	myo9b (ENSXETG00000031954)	ENSXETG00000021456	tmem38a (ENSXETG00000021455)	smim7 (ENSXETG00000025580)	med26 (ENSXETG00000021451)	cherp (ENSXETG00000002072)	c19orf44 (ENSXETG00000002073)	eps15l1 (ENSXETG00000002074)	klf2 (ENSXETG00000002075)	gdf3 (ENSXETG00000002076)	gdf1 (ENSXETG00000010131)	ddx49 (ENSXETG00000010135)	cers1 (ENSXETG00000010133)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000024721	ENSLLEG00000024681	ENSLLEG00000024629	EPS15L1 (ENSLLEG00000024416)	ENSLLEG00000024345	CHERP (ENSLLEG00000023991)	SLC35E1 (ENSLLEG00000023915)	ENSLLEG00000023882	MED26 (ENSLLEG00000023767)	SMIM7 (ENSLLEG00000023704)	TMEM38A (ENSLLEG00000023569)	ENSLLEG00000023496	ENSLLEG00000023468	ENSLLEG00000023303	SIN3B (ENSLLEG00000023120)	F2RL3 (ENSLLEG00000023092) ##19	CPAMD8 (ENSLLEG00000022385)	HAUS8 (ENSLLEG00000022179)	MYO9B (ENSLLEG00000020991)	USE1 (ENSLLEG00000020365)	INSR (ENSLLEG00000020146)	BABAM1 (ENSLLEG00000020048)	ENSLLEG00000019608	NR2F6 (ENSLLEG00000019522)	ENSLLEG00000019464	ENSLLEG00000019417	ENSLLEG00000019333	ENSLLEG00000019293	KCNN1 (ENSLLEG00000019159)	CCDC124 (ENSLLEG00000019104)	ENSLLEG00000019079
Anura	ANCESTRAL SPECIES	279														ENSGT00940000160541	ENSGT00510000046732.B	ENSGT01050000244840.A.b.a.t ##19	ENSGT00940000158869	ENSGT00940000164810	ENSGT00940000155521	ENSGT00390000002137	ENSGT00940000160403	ENSGT00940000160738.c
Frog	MODERN SPECIES	3	ENSXETG00000039045	ENSXETG00000015402	diaph1 (ENSXETG00000002715)	hdac3 (ENSXETG00000002708)	pcdhgc4 (ENSXETG00000002703)	fchsd1 (ENSXETG00000002698)	rell2 (ENSXETG00000002692)	pcdhga11 (ENSXETG00000038288)	ENSXETG00000047595	ENSXETG00000045483	ENSXETG00000024520	ENSXETG00000043628	ENSXETG00000038087	ENSXETG00000040566	ENSXETG00000024522	ENSXETG00000002682 ##19	ssbp1 (ENSXETG00000002681)	ENSXETG00000041629	stard15 (ENSXETG00000002677)	ENSXETG00000037256	ENSXETG00000038990	pcdh1 (ENSXETG00000001875)	ENSXETG00000046311	matr3 (ENSXETG00000003838)	pura (ENSXETG00000003837)	hnrnpab (ENSXETG00000003836)	ENSXETG00000044694	hnrnpa0 (ENSXETG00000046279)	clk1 (ENSXETG00000003831)	adamts2 (ENSXETG00000003829)	gfpt2 (ENSXETG00000003828)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000014212	ENSLLEG00000014279	ENSLLEG00000014583	ENSLLEG00000014624	ENSLLEG00000014676	ENSLLEG00000014718	ENSLLEG00000014741	ENSLLEG00000014897	ENSLLEG00000015016	ENSLLEG00000015398	ENSLLEG00000015446	ENSLLEG00000015482	ENSLLEG00000015568	RELL2 (ENSLLEG00000015651)	FCHSD1 (ENSLLEG00000015745)	ENSLLEG00000016258 ##19	ARAP3 (ENSLLEG00000016325)	ENSLLEG00000016993	ENSLLEG00000017019	ENSLLEG00000017079	ENSLLEG00000017196	ENSLLEG00000017220	ENSLLEG00000017254	ENSLLEG00000017282	ENSLLEG00000017329	ENSLLEG00000017421	ENSLLEG00000017447	PCDH1 (ENSLLEG00000017533)	ENSLLEG00000018025	ENSLLEG00000018042	ENSLLEG00000018064
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050
Mammalia	ANCESTRAL SPECIES	64	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000162948	ENSGT00950000183036.b	ENSGT00940000159130	ENSGT00950000182975.a.b	ENSGT00550000075140
Theria	ANCESTRAL SPECIES	29	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000165052	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000165052	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000165052	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316.a	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
Diprotodontia	ANCESTRAL SPECIES	68	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000165052	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316.a	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000165052	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316.a	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
koala	MODERN SPECIES	190	CIB3 (ENSPCIG00000009310)	FAM32A (ENSPCIG00000019649)	AP1M1 (ENSPCIG00000019644)	EPS15L1 (ENSPCIG00000019632)	ENSPCIG00000034808	CALR3 (ENSPCIG00000019623)	ENSPCIG00000019616	CHERP (ENSPCIG00000019615)	SLC35E1 (ENSPCIG00000019614)	MED26 (ENSPCIG00000019612)	SMIM7 (ENSPCIG00000019611)	TMEM38A (ENSPCIG00000019610)	ENSPCIG00000032012	NWD1 (ENSPCIG00000019608)	SIN3B (ENSPCIG00000019606)	F2RL3 (ENSPCIG00000019605) ##19	ENSPCIG00000031252	ENSPCIG00000019593	MYO9B (ENSPCIG00000018481)	USE1 (ENSPCIG00000018427)	ENSPCIG00000018425	ENSPCIG00000018424	NR2F6 (ENSPCIG00000018422)	ENSPCIG00000018416	BABAM1 (ENSPCIG00000018414)	ENSPCIG00000036931	ENSPCIG00000018411	ABHD8 (ENSPCIG00000018410)	ENSPCIG00000033700	ENSPCIG00000032495	ANO8 (ENSPCIG00000018400)
Common wonbat	MODERN SPECIES	1141	CIB3 (ENSVURG00010010825)	FAM32A (ENSVURG00010010812)	AP1M1 (ENSVURG00010010801)	KLF2 (ENSVURG00010010792)	EPS15L1 (ENSVURG00010010717)	CALR3 (ENSVURG00010010676)	ENSVURG00010010663	CHERP (ENSVURG00010010636)	SLC35E1 (ENSVURG00010010617)	MED26 (ENSVURG00010010603)	SMIM7 (ENSVURG00010010588)	TMEM38A (ENSVURG00010010577)	ENSVURG00010010568	NWD1 (ENSVURG00010010446)	SIN3B (ENSVURG00010010396)	F2RL3 (ENSVURG00010010385) ##19	ENSVURG00010010371	MYO9B (ENSVURG00010010244)	USE1 (ENSVURG00010010199)	ENSVURG00010010189	ENSVURG00010010182	NR2F6 (ENSVURG00010010175)	ENSVURG00010010152	BABAM1 (ENSVURG00010010126)	ENSVURG00010010112	ABHD8 (ENSVURG00010010100)	ENSVURG00010010092	ENSVURG00010010086	ENSVURG00010010076	ANO8 (ENSVURG00010009955)	GTPBP3 (ENSVURG00010009927)
Tasmanian devil	MODERN SPECIES		RAB8A (ENSSHAG00000006491)	CIB3 (ENSSHAG00000007435)	FAM32A (ENSSHAG00000029761)	AP1M1 (ENSSHAG00000007792)	KLF2 (ENSSHAG00000027323)	EPS15L1 (ENSSHAG00000009699)	CALR3 (ENSSHAG00000010520)	ENSSHAG00000010638	CHERP (ENSSHAG00000010752)	MED26 (ENSSHAG00000011089)	SMIM7 (ENSSHAG00000032265)	TMEM38A (ENSSHAG00000020699)	ENSSHAG00000023609	NWD1 (ENSSHAG00000001246)	SIN3B (ENSSHAG00000004536)	ENSSHAG00000006067 ##19	CPAMD8 (ENSSHAG00000006276)	ENSSHAG00000009053	MYO9B (ENSSHAG00000009506)	USE1 (ENSSHAG00000028409)	ENSSHAG00000025653	ENSSHAG00000000218	NR2F6 (ENSSHAG00000031154)	ENSSHAG00000001406	BABAM1 (ENSSHAG00000028466)	ENSSHAG00000023821	ABHD8 (ENSSHAG00000029111)	ENSSHAG00000030827	DDA1 (ENSSHAG00000031655)	ANO8 (ENSSHAG00000014548)	GTPBP3 (ENSSHAG00000022183)
Opossum	MODERN SPECIES	2	CIB3 (ENSMODG00000014899)	FAM32A (ENSMODG00000014904)	AP1M1 (ENSMODG00000014908)	ENSMODG00000039199	EPS15L1 (ENSMODG00000014917)	CALR3 (ENSMODG00000014922)	ENSMODG00000014929	CHERP (ENSMODG00000014938)	SLC35E1 (ENSMODG00000014942)	MED26 (ENSMODG00000014944)	SMIM7 (ENSMODG00000050177)	TMEM38A (ENSMODG00000014946)	ENSMODG00000014949	NWD1 (ENSMODG00000014951)	SIN3B (ENSMODG00000014992)	ENSMODG00000014994 ##19	CPAMD8 (ENSMODG00000015006)	ENSMODG00000047028	ENSMODG00000015021	MYO9B (ENSMODG00000015036)	USE1 (ENSMODG00000015039)	ENSMODG00000015041	ENSMODG00000015045	NR2F6 (ENSMODG00000015049)	ENSMODG00000015061	BABAM1 (ENSMODG00000015070)	ENSMODG00000037689	ABHD8 (ENSMODG00000015077)	ENSMODG00000038440	DDA1 (ENSMODG00000043860)	ANO8 (ENSMODG00000015094)
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Primates	ANCESTRAL SPECIES	18	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259.f	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259.f	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Lemuriformes_a	ANCESTRAL SPECIES	185	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259.f	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399
Coquerels sifaka	MODERN SPECIES	985										SLC35E1 (ENSPCOG00000018470)	MED26 (ENSPCOG00000022724)	SMIM7 (ENSPCOG00000017858)	TMEM38A (ENSPCOG00000005912)	NWD1 (ENSPCOG00000024527)	SIN3B (ENSPCOG00000008105)	F2RL3 (ENSPCOG00000020050) ##19	CPAMD8 (ENSPCOG00000016554)	ENSPCOG00000021807
Greater bamboo lemur	MODERN SPECIES	1122															SIN3B (ENSPSMG00000016105)	F2RL3 (ENSPSMG00000016072) ##19
Mouse lemur	MODERN SPECIES	16	MRI1 (ENSMICG00000031875)	CIB3 (ENSMICG00000013968)	FAM32A (ENSMICG00000048134)	AP1M1 (ENSMICG00000013728)	KLF2 (ENSMICG00000035322)	EPS15L1 (ENSMICG00000004549)	CALR3 (ENSMICG00000026331)	C19orf44 (ENSMICG00000004564)	CHERP (ENSMICG00000004577)	SLC35E1 (ENSMICG00000004587)	MED26 (ENSMICG00000030425)	SMIM7 (ENSMICG00000047863)	TMEM38A (ENSMICG00000044609)	NWD1 (ENSMICG00000003445)	SIN3B (ENSMICG00000003468)	F2RL3 (ENSMICG00000027121) ##19	ENSMICG00000000327	ENSMICG00000042907	ENSMICG00000014240	ZNF333 (ENSMICG00000029549)	ADGRE3 (ENSMICG00000011089)	CLEC17A (ENSMICG00000011080)	NDUFB7 (ENSMICG00000043903)	TECR (ENSMICG00000009818)	DNAJB1 (ENSMICG00000047161)	GIPC1 (ENSMICG00000004336)	PTGER1 (ENSMICG00000045048)	PKN1 (ENSMICG00000035009)	DDX39A (ENSMICG00000015325)	ENSMICG00000046227	ENSMICG00000032629
Bushbaby	MODERN SPECIES	220	HSH2D (ENSOGAG00000011948)	CIB3 (ENSOGAG00000026348)	ENSOGAG00000027763	AP1M1 (ENSOGAG00000016047)	KLF2 (ENSOGAG00000030297)	EPS15L1 (ENSOGAG00000008456)	CALR3 (ENSOGAG00000005827)	C19orf44 (ENSOGAG00000005830)	CHERP (ENSOGAG00000005834)	SLC35E1 (ENSOGAG00000005840)	MED26 (ENSOGAG00000034820)	SMIM7 (ENSOGAG00000032634)	TMEM38A (ENSOGAG00000005846)	NWD1 (ENSOGAG00000006070)	SIN3B (ENSOGAG00000006074)	F2RL3 (ENSOGAG00000028611) ##19	ENSOGAG00000031673	HAUS8 (ENSOGAG00000034468)	MYO9B (ENSOGAG00000008379)	NR2F6 (ENSOGAG00000030281)	USHBP1 (ENSOGAG00000008395)	BABAM1 (ENSOGAG00000008400)	ANKLE1 (ENSOGAG00000008404)	ABHD8 (ENSOGAG00000007003)	MRPL34 (ENSOGAG00000028616)	DDA1 (ENSOGAG00000003701)	ANO8 (ENSOGAG00000007006)	GTPBP3 (ENSOGAG00000007014)	PLVAP (ENSOGAG00000032556)	MVB12A (ENSOGAG00000030761)	ENSOGAG00000027569
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560.h	ENSGT00940000159560.g	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00910000147815	ENSGT00940000157019	ENSGT00390000016851
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560.g	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00910000147815	ENSGT00940000157019	ENSGT00390000016851
Marmoset	MODERN SPECIES	14	FAM32A (ENSCJAG00000014097)	AP1M1 (ENSCJAG00000014070)	KLF2 (ENSCJAG00000045561)	EPS15L1 (ENSCJAG00000013985)	CALR3 (ENSCJAG00000013978)	C19orf44 (ENSCJAG00000013966)	CHERP (ENSCJAG00000040462)	SLC35E1 (ENSCJAG00000013952)	MED26 (ENSCJAG00000013939)	ENSCJAG00000083081	SMIM7 (ENSCJAG00000013936)	TMEM38A (ENSCJAG00000013929)	ENSCJAG00000073817	NWD1 (ENSCJAG00000009420)	ENSCJAG00000016111	F2RL3 (ENSCJAG00000009441) ##19	CPAMD8 (ENSCJAG00000009438)	HAUS8 (ENSCJAG00000009466)	MYO9B (ENSCJAG00000009486)	USE1 (ENSCJAG00000009547)	OCEL1 (ENSCJAG00000009584)	NR2F6 (ENSCJAG00000009593)	USHBP1 (ENSCJAG00000009614)	BABAM1 (ENSCJAG00000009641)	ANKLE1 (ENSCJAG00000009656)	ABHD8 (ENSCJAG00000009699)	MRPL34 (ENSCJAG00000080819)	DDA1 (ENSCJAG00000070855)	ANO8 (ENSCJAG00000040310)	GTPBP3 (ENSCJAG00000009731)	PLVAP (ENSCJAG00000009753)
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560.g	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00910000147815	ENSGT00940000157019	ENSGT00390000016851
Capuchin	MODERN SPECIES	280	CIB3 (ENSCCAG00000036781)	FAM32A (ENSCCAG00000030893)	AP1M1 (ENSCCAG00000024452)	KLF2 (ENSCCAG00000026117)	EPS15L1 (ENSCCAG00000035378)	ENSCCAG00000033129	CALR3 (ENSCCAG00000029775)	C19orf44 (ENSCCAG00000026019)	CHERP (ENSCCAG00000031534)	SLC35E1 (ENSCCAG00000031022)	MED26 (ENSCCAG00000037166)	SMIM7 (ENSCCAG00000022178)	TMEM38A (ENSCCAG00000028253)	NWD1 (ENSCCAG00000033354)	SIN3B (ENSCCAG00000021888)	F2RL3 (ENSCCAG00000033855) ##19	CPAMD8 (ENSCCAG00000032959)	HAUS8 (ENSCCAG00000037405)	MYO9B (ENSCCAG00000024486)	USE1 (ENSCCAG00000023138)	OCEL1 (ENSCCAG00000037726)	NR2F6 (ENSCCAG00000037017)	USHBP1 (ENSCCAG00000020469)	BABAM1 (ENSCCAG00000037060)	ANKLE1 (ENSCCAG00000019658)	ABHD8 (ENSCCAG00000026840)	ENSCCAG00000031745	DDA1 (ENSCCAG00000033180)	ENSCCAG00000006071	ANO8 (ENSCCAG00000036445)	GTPBP3 (ENSCCAG00000020717)
Bolivian squirrel monkey	MODERN SPECIES	199	RAB8A (ENSSBOG00000023878)	ENSSBOG00000027887	FAM32A (ENSSBOG00000035347)	AP1M1 (ENSSBOG00000029089)	ENSSBOG00000027797	EPS15L1 (ENSSBOG00000026422)	ENSSBOG00000036135	CALR3 (ENSSBOG00000029074)	CHERP (ENSSBOG00000014492)	MED26 (ENSSBOG00000024207)	ENSSBOG00000032742	SMIM7 (ENSSBOG00000031649)	TMEM38A (ENSSBOG00000026791)	NWD1 (ENSSBOG00000030232)	SIN3B (ENSSBOG00000025410)	F2RL3 (ENSSBOG00000002537) ##19	CPAMD8 (ENSSBOG00000024896)	ENSSBOG00000032294	MYO9B (ENSSBOG00000022491)	USE1 (ENSSBOG00000001119)	ENSSBOG00000030595	NR2F6 (ENSSBOG00000020786)	USHBP1 (ENSSBOG00000021521)	BABAM1 (ENSSBOG00000031624)	ANKLE1 (ENSSBOG00000017922)	ENSSBOG00000031590	ABHD8 (ENSSBOG00000022994)	DDA1 (ENSSBOG00000031583)	ANO8 (ENSSBOG00000027174)	GTPBP3 (ENSSBOG00000003356)	PLVAP (ENSSBOG00000025435)
Mas night monkey	MODERN SPECIES	1353																F2RL3 (ENSANAG00000034700) ##19	CPAMD8 (ENSANAG00000026184)	ENSANAG00000030558	MYO9B (ENSANAG00000021391)	USE1 (ENSANAG00000025433)	OCEL1 (ENSANAG00000019326)	NR2F6 (ENSANAG00000027639)	USHBP1 (ENSANAG00000022166)	BABAM1 (ENSANAG00000028377)	ANKLE1 (ENSANAG00000037759)	ENSANAG00000020983	ABHD8 (ENSANAG00000022324)	DDA1 (ENSANAG00000031171)	ENSANAG00000036309	ANO8 (ENSANAG00000021655)	GTPBP3 (ENSANAG00000030487)
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Hominidae	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Pan	ANCESTRAL SPECIES	14	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399.c	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748.g	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Chimpanzee	MODERN SPECIES	10	HSH2D (ENSPTRG00000023880)	CIB3 (ENSPTRG00000010640)	FAM32A (ENSPTRG00000010641)	AP1M1 (ENSPTRG00000010642)	KLF2 (ENSPTRG00000010643)	EPS15L1 (ENSPTRG00000010644)	CALR3 (ENSPTRG00000010645)	C19H19orf44 (ENSPTRG00000010646)	CHERP (ENSPTRG00000010647)	SLC35E1 (ENSPTRG00000010648)	MED26 (ENSPTRG00000010649)	SMIM7 (ENSPTRG00000010650)	TMEM38A (ENSPTRG00000010651)	NWD1 (ENSPTRG00000010653)	SIN3B (ENSPTRG00000010654)	F2RL3 (ENSPTRG00000029092) ##19	ENSPTRG00000050719	HAUS8 (ENSPTRG00000010657)	MYO9B (ENSPTRG00000010658)	ENSPTRG00000050535	USE1 (ENSPTRG00000010659)	ENSPTRG00000045673	OCEL1 (ENSPTRG00000010660)	NR2F6 (ENSPTRG00000010661)	BABAM1 (ENSPTRG00000010664)	ANKLE1 (ENSPTRG00000010665)	ABHD8 (ENSPTRG00000010666)	MRPL34 (ENSPTRG00000029090)	DDA1 (ENSPTRG00000043860)	ANO8 (ENSPTRG00000010669)	GTPBP3 (ENSPTRG00000010670)
Bonobo	MODERN SPECIES	10	HSH2D (ENSPPAG00000031940)	CIB3 (ENSPPAG00000041194)	FAM32A (ENSPPAG00000025422)	AP1M1 (ENSPPAG00000041870)	ENSPPAG00000028173	EPS15L1 (ENSPPAG00000043633)	CALR3 (ENSPPAG00000039726)	C19orf44 (ENSPPAG00000029222)	CHERP (ENSPPAG00000029195)	SLC35E1 (ENSPPAG00000026424)	MED26 (ENSPPAG00000033523)	ENSPPAG00000037541	TMEM38A (ENSPPAG00000005460)	NWD1 (ENSPPAG00000032301)	SIN3B (ENSPPAG00000043909)	F2RL3 (ENSPPAG00000030821) ##19	ENSPPAG00000037601	HAUS8 (ENSPPAG00000039288)	MYO9B (ENSPPAG00000033794)	USE1 (ENSPPAG00000028209)	OCEL1 (ENSPPAG00000031905)	ENSPPAG00000027181	USHBP1 (ENSPPAG00000039818)	BABAM1 (ENSPPAG00000029830)	ANKLE1 (ENSPPAG00000037684)	ABHD8 (ENSPPAG00000006875)	MRPL34 (ENSPPAG00000032716)	DDA1 (ENSPPAG00000041026)	ANO8 (ENSPPAG00000033991)	GTPBP3 (ENSPPAG00000027605)	PLVAP (ENSPPAG00000027257)
Human	MODERN SPECIES	10	CIB3 (ENSG00000141977)	FAM32A (ENSG00000105058)	AP1M1 (ENSG00000072958)	KLF2 (ENSG00000127528)	EPS15L1 (ENSG00000127527)	CALR3 (ENSG00000269058)	C19orf44 (ENSG00000105072)	CHERP (ENSG00000085872)	SLC35E1 (ENSG00000127526)	MED26 (ENSG00000105085)	ENSG00000268790	SMIM7 (ENSG00000214046)	TMEM38A (ENSG00000072954)	NWD1 (ENSG00000188039)	SIN3B (ENSG00000127511)	F2RL3 (ENSG00000127533) ##19	CPAMD8 (ENSG00000160111)	HAUS8 (ENSG00000131351)	MYO9B (ENSG00000099331)	USE1 (ENSG00000053501)	OCEL1 (ENSG00000099330)	NR2F6 (ENSG00000160113)	ENSG00000269095	USHBP1 (ENSG00000130307)	BABAM1 (ENSG00000105393)	ANKLE1 (ENSG00000160117)	ABHD8 (ENSG00000127220)	MRPL34 (ENSG00000130312)	DDA1 (ENSG00000130311)	ANO8 (ENSG00000074855)	GTPBP3 (ENSG00000130299)
Gorilla	MODERN SPECIES	10	RAB8A (ENSGGOG00000015236)	HSH2D (ENSGGOG00000000044)	CIB3 (ENSGGOG00000004340)	FAM32A (ENSGGOG00000022418)	AP1M1 (ENSGGOG00000004343)	EPS15L1 (ENSGGOG00000013623)	CALR3 (ENSGGOG00000022144)	C19orf44 (ENSGGOG00000016339)	CHERP (ENSGGOG00000016348)	SLC35E1 (ENSGGOG00000016361)	MED26 (ENSGGOG00000016370)	ENSGGOG00000040518	TMEM38A (ENSGGOG00000008175)	NWD1 (ENSGGOG00000016341)	SIN3B (ENSGGOG00000009520)	F2RL3 (ENSGGOG00000007746) ##19	CPAMD8 (ENSGGOG00000041886)	HAUS8 (ENSGGOG00000009382)	MYO9B (ENSGGOG00000009393)	USE1 (ENSGGOG00000009410)	OCEL1 (ENSGGOG00000010983)	USHBP1 (ENSGGOG00000005773)	BABAM1 (ENSGGOG00000005781)	ANKLE1 (ENSGGOG00000005788)	ABHD8 (ENSGGOG00000005794)	ENSGGOG00000005799	ENSGGOG00000038573	ENSGGOG00000022333	GTPBP3 (ENSGGOG00000015580)	PLVAP (ENSGGOG00000006691)	CCDC194 (ENSGGOG00000043328)
Orangutan	MODERN SPECIES	10	HSH2D (ENSPPYG00000009683)	CIB3 (ENSPPYG00000009684)	FAM32A (ENSPPYG00000036075)	AP1M1 (ENSPPYG00000009686)	KLF2 (ENSPPYG00000009687)	EPS15L1 (ENSPPYG00000009688)	CALR3 (ENSPPYG00000009689)	C19orf44 (ENSPPYG00000009690)	CHERP (ENSPPYG00000009691)	SLC35E1 (ENSPPYG00000009692)	MED26 (ENSPPYG00000040195)	ENSPPYG00000009694	TMEM38A (ENSPPYG00000009695)	NWD1 (ENSPPYG00000009696)	SIN3B (ENSPPYG00000009697)	F2RL3 (ENSPPYG00000009698) ##19	CPAMD8 (ENSPPYG00000009699)	HAUS8 (ENSPPYG00000009700)	MYO9B (ENSPPYG00000009701)	USE1 (ENSPPYG00000009702)	OCEL1 (ENSPPYG00000029502)	NR2F6 (ENSPPYG00000009703)	USHBP1 (ENSPPYG00000009704)	BABAM1 (ENSPPYG00000009705)	ANKLE1 (ENSPPYG00000009706)	ABHD8 (ENSPPYG00000009707)	ENSPPYG00000031398	ANO8 (ENSPPYG00000009708)	GTPBP3 (ENSPPYG00000009711)	PLVAP (ENSPPYG00000009712)	CCDC194 (ENSPPYG00000035415)
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Vervet Monkey	MODERN SPECIES	25	RAB8A (ENSCSAG00000005783)	HSH2D (ENSCSAG00000005778)	CIB3 (ENSCSAG00000005772)	FAM32A (ENSCSAG00000005769)	AP1M1 (ENSCSAG00000005766)	KLF2 (ENSCSAG00000005764)	EPS15L1 (ENSCSAG00000005759)	CALR3 (ENSCSAG00000005752)	C19orf44 (ENSCSAG00000005750)	CHERP (ENSCSAG00000005740)	SLC35E1 (ENSCSAG00000005715)	MED26 (ENSCSAG00000005707)	TMEM38A (ENSCSAG00000005703)	NWD1 (ENSCSAG00000005700)	SIN3B (ENSCSAG00000005690)	F2RL3 (ENSCSAG00000005687) ##19	CPAMD8 (ENSCSAG00000005682)	HAUS8 (ENSCSAG00000005673)	MYO9B (ENSCSAG00000005666)	USE1 (ENSCSAG00000005659)	OCEL1 (ENSCSAG00000005652)	NR2F6 (ENSCSAG00000005651)	USHBP1 (ENSCSAG00000005650)	BABAM1 (ENSCSAG00000005645)	ANKLE1 (ENSCSAG00000005640)	ABHD8 (ENSCSAG00000005631)	MRPL34 (ENSCSAG00000005626)	DDA1 (ENSCSAG00000005624)	ANO8 (ENSCSAG00000005616)	PLVAP (ENSCSAG00000005605)	BST2 (ENSCSAG00000005601)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.h	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Pig-tailed macaque	MODERN SPECIES	76	CIB3 (ENSMNEG00000045252)	FAM32A (ENSMNEG00000031002)	AP1M1 (ENSMNEG00000014458)	KLF2 (ENSMNEG00000032490)	EPS15L1 (ENSMNEG00000033557)	CALR3 (ENSMNEG00000005210)	C19orf44 (ENSMNEG00000042005)	CHERP (ENSMNEG00000004125)	SLC35E1 (ENSMNEG00000041471)	MED26 (ENSMNEG00000043812)	ENSMNEG00000007348	ENSMNEG00000042136	TMEM38A (ENSMNEG00000044076)	NWD1 (ENSMNEG00000029893)	SIN3B (ENSMNEG00000031515)	F2RL3 (ENSMNEG00000031285) ##19	CPAMD8 (ENSMNEG00000040985)	HAUS8 (ENSMNEG00000029611)	MYO9B (ENSMNEG00000044725)	USE1 (ENSMNEG00000044794)	ENSMNEG00000039761	OCEL1 (ENSMNEG00000042854)	NR2F6 (ENSMNEG00000038742)	USHBP1 (ENSMNEG00000014070)	BABAM1 (ENSMNEG00000033456)	ANKLE1 (ENSMNEG00000032946)	ABHD8 (ENSMNEG00000034693)	ENSMNEG00000041354	DDA1 (ENSMNEG00000044354)	ANO8 (ENSMNEG00000029983)	GTPBP3 (ENSMNEG00000038380)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT01030000236338	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00940000161635	ENSGT01100000263539.b.a.a.a.a.a.b.a.a.a.a.a.b.a.a	ENSGT01100000263493.a.b.b.a.a.b.a.a.a.d.b	ENSGT00940000159560	ENSGT00980000200725	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.h	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Rhesus	MODERN SPECIES	10	KLF2 (ENSMMUG00000028855)	EPS15L1 (ENSMMUG00000000994)	CALR3 (ENSMMUG00000040142)	C19H19orf44 (ENSMMUG00000028852)	CHERP (ENSMMUG00000012958)	SLC35E1 (ENSMMUG00000012959)	MED26 (ENSMMUG00000042837)	ENSMMUG00000062590	TMEM38A (ENSMMUG00000052014)	ENSMMUG00000061494	NWD1 (ENSMMUG00000018503)	ENSMMUG00000064661	ENSMMUG00000054759	SIN3B (ENSMMUG00000018504)	ENSMMUG00000056913	F2RL3 (ENSMMUG00000058540) ##19	CPAMD8 (ENSMMUG00000017254)	HAUS8 (ENSMMUG00000000491)	ENSMMUG00000057451	ENSMMUG00000057655	ENSMMUG00000011588	USE1 (ENSMMUG00000011589)	OCEL1 (ENSMMUG00000011931)	NR2F6 (ENSMMUG00000028849)	USHBP1 (ENSMMUG00000013924)	BABAM1 (ENSMMUG00000013923)	ENSMMUG00000064093	ANKLE1 (ENSMMUG00000016228)	ABHD8 (ENSMMUG00000009656)	MRPL34 (ENSMMUG00000009657)	DDA1 (ENSMMUG00000016231)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b.d	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b.d	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Sooty mangabey	MODERN SPECIES	347	CIB3 (ENSCATG00000029629)	FAM32A (ENSCATG00000042554)	AP1M1 (ENSCATG00000042458)	KLF2 (ENSCATG00000043747)	EPS15L1 (ENSCATG00000033150)	CALR3 (ENSCATG00000031211)	C19orf44 (ENSCATG00000040878)	CHERP (ENSCATG00000031409)	SLC35E1 (ENSCATG00000031586)	MED26 (ENSCATG00000041612)	SMIM7 (ENSCATG00000033433)	TMEM38A (ENSCATG00000030391)	ENSCATG00000030522	NWD1 (ENSCATG00000016343)	SIN3B (ENSCATG00000043735)	F2RL3 (ENSCATG00000042605) ##19	CPAMD8 (ENSCATG00000030894)	HAUS8 (ENSCATG00000021545)	MYO9B (ENSCATG00000042263)	USE1 (ENSCATG00000036973)	OCEL1 (ENSCATG00000044087)	NR2F6 (ENSCATG00000032407)	USHBP1 (ENSCATG00000031625)	BABAM1 (ENSCATG00000032000)	ANKLE1 (ENSCATG00000035073)	ABHD8 (ENSCATG00000040979)	ENSCATG00000032681	DDA1 (ENSCATG00000035158)	ANO8 (ENSCATG00000032795)	GTPBP3 (ENSCATG00000030444)	PLVAP (ENSCATG00000038826)
Olive baboon	MODERN SPECIES	12	RAB8A (ENSPANG00000031542)	HSH2D (ENSPANG00000050187)	CIB3 (ENSPANG00000016651)	FAM32A (ENSPANG00000007385)	AP1M1 (ENSPANG00000026386)	KLF2 (ENSPANG00000040729)	EPS15L1 (ENSPANG00000010521)	CALR3 (ENSPANG00000018584)	C19orf44 (ENSPANG00000009377)	CHERP (ENSPANG00000011698)	SLC35E1 (ENSPANG00000011400)	MED26 (ENSPANG00000033826)	TMEM38A (ENSPANG00000031300)	NWD1 (ENSPANG00000034320)	SIN3B (ENSPANG00000004466)	F2RL3 (ENSPANG00000032456) ##19	CPAMD8 (ENSPANG00000017790)	HAUS8 (ENSPANG00000004445)	MYO9B (ENSPANG00000020428)	USE1 (ENSPANG00000010108)	OCEL1 (ENSPANG00000015377)	NR2F6 (ENSPANG00000016649)	USHBP1 (ENSPANG00000046152)	BABAM1 (ENSPANG00000033388)	ANKLE1 (ENSPANG00000023923)	ABHD8 (ENSPANG00000004510)	ENSPANG00000030930	DDA1 (ENSPANG00000015034)	ANO8 (ENSPANG00000017975)	GTPBP3 (ENSPANG00000017711)	PLVAP (ENSPANG00000013958)
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b.e.a	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505.e	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240.e	ENSGT00390000007029.j.b	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	621															SIN3B (ENSRBIG00000026669)	ENSRBIG00000033215 ##19	ENSRBIG00000024085 ##19	CPAMD8 (ENSRBIG00000044407)	HAUS8 (ENSRBIG00000042872)	MYO9B (ENSRBIG00000034981)	USE1 (ENSRBIG00000032000)	OCEL1 (ENSRBIG00000024617)	NR2F6 (ENSRBIG00000000548)	USHBP1 (ENSRBIG00000038199)	BABAM1 (ENSRBIG00000043811)	ANKLE1 (ENSRBIG00000031846)	ENSRBIG00000010999	DDA1 (ENSRBIG00000029678)	ANO8 (ENSRBIG00000040344)	GTPBP3 (ENSRBIG00000039889)	PLVAP (ENSRBIG00000038932)
Black snub-nosed monkey	MODERN SPECIES	621														SIN3B (ENSRBIG00000026669)	ENSRBIG00000033215 ##19	ENSRBIG00000024085 ##19	CPAMD8 (ENSRBIG00000044407)	HAUS8 (ENSRBIG00000042872)	MYO9B (ENSRBIG00000034981)	USE1 (ENSRBIG00000032000)	OCEL1 (ENSRBIG00000024617)	NR2F6 (ENSRBIG00000000548)	USHBP1 (ENSRBIG00000038199)	BABAM1 (ENSRBIG00000043811)	ANKLE1 (ENSRBIG00000031846)	ENSRBIG00000010999	DDA1 (ENSRBIG00000029678)	ANO8 (ENSRBIG00000040344)	GTPBP3 (ENSRBIG00000039889)	PLVAP (ENSRBIG00000038932)	CCDC194 (ENSRBIG00000036240)
Golden snub-nosed monkey	MODERN SPECIES	975	RAB8A (ENSRROG00000029919)	HSH2D (ENSRROG00000026918)	CIB3 (ENSRROG00000030426)	FAM32A (ENSRROG00000034975)	AP1M1 (ENSRROG00000024253)	ENSRROG00000037623	EPS15L1 (ENSRROG00000045198)	CALR3 (ENSRROG00000044958)	ENSRROG00000045590	CHERP (ENSRROG00000040770)	MED26 (ENSRROG00000030840)	SMIM7 (ENSRROG00000037813)	TMEM38A (ENSRROG00000038969)	NWD1 (ENSRROG00000029874)	SIN3B (ENSRROG00000040763)	F2RL3 (ENSRROG00000028015) ##19	CPAMD8 (ENSRROG00000030302)	HAUS8 (ENSRROG00000041081)	MYO9B (ENSRROG00000033422)	USE1 (ENSRROG00000036840)	OCEL1 (ENSRROG00000030359)	NR2F6 (ENSRROG00000033865)	USHBP1 (ENSRROG00000045080)	BABAM1 (ENSRROG00000034274)	ANKLE1 (ENSRROG00000002000)	ABHD8 (ENSRROG00000039901)	ENSRROG00000028622	DDA1 (ENSRROG00000038059)	ANO8 (ENSRROG00000038941)	GTPBP3 (ENSRROG00000033731)	PLVAP (ENSRROG00000016070)
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Glires	ANCESTRAL SPECIES	21	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Muroidea	ANCESTRAL SPECIES	47	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Chinese hamster chok1gshd	MODERN SPECIES	184	Hsh2d (ENSCGRG00001018531)	Cib3 (ENSCGRG00001004716)	Fam32a (ENSCGRG00001006672)	Ap1m1 (ENSCGRG00001008071)	Klf2 (ENSCGRG00001008944)	Eps15l1 (ENSCGRG00001014125)	Calr3 (ENSCGRG00001021544)	1700030K09Rik (ENSCGRG00001022027)	Cherp (ENSCGRG00001023316)	ENSCGRG00001003760	Med26 (ENSCGRG00001005532)	Smim7 (ENSCGRG00001010544)	Tmem38a (ENSCGRG00001011988)	Nwd1 (ENSCGRG00001013606)	Sin3b (ENSCGRG00001018859)	F2rl3 (ENSCGRG00001019664) ##19	Haus8 (ENSCGRG00001023903)	Myo9b (ENSCGRG00001006274)	Use1 (ENSCGRG00001000511)	Ocel1 (ENSCGRG00001017059)	Nr2f6 (ENSCGRG00001022405)	Ushbp1 (ENSCGRG00001008909)	Babam1 (ENSCGRG00001015012)	Ankle1 (ENSCGRG00001008327)	Abhd8 (ENSCGRG00001010324)	Mrpl34 (ENSCGRG00001014234)	ENSCGRG00001011162	Ano8 (ENSCGRG00001012703)	Gtpbp3 (ENSCGRG00001000390)	Plvap (ENSCGRG00001013008)	Ccdc194 (ENSCGRG00001013325)
Golden Hamster	MODERN SPECIES	866	Hsh2d (ENSMAUG00000003927)	Cib3 (ENSMAUG00000008413)	Fam32a (ENSMAUG00000009102)	Ap1m1 (ENSMAUG00000009830)	Klf2 (ENSMAUG00000010080)	Eps15l1 (ENSMAUG00000010333)	Calr3 (ENSMAUG00000011954)	1700030K09Rik (ENSMAUG00000013843)	Cherp (ENSMAUG00000015856)	Slc35e1 (ENSMAUG00000004244)	Med26 (ENSMAUG00000010941)	Smim7 (ENSMAUG00000008259)	Tmem38a (ENSMAUG00000011812)	Nwd1 (ENSMAUG00000012768)	Sin3b (ENSMAUG00000009943)	F2rl3 (ENSMAUG00000015009) ##19	Use1 (ENSMAUG00000001720)	Nr2f6 (ENSMAUG00000006855)	Ocel1 (ENSMAUG00000012743)	Ushbp1 (ENSMAUG00000001335)	Babam1 (ENSMAUG00000006043)	Ankle1 (ENSMAUG00000013355)
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	349	Mier2 (ENSMOCG00000008764)	Plpp2 (ENSMOCG00000008121)	Fam32a (ENSMOCG00000010252)	Ap1m1 (ENSMOCG00000013916)	Klf2 (ENSMOCG00000015332)	Eps15l1 (ENSMOCG00000019887)	Calr3 (ENSMOCG00000015755)	1700030K09Rik (ENSMOCG00000004691)	Cherp (ENSMOCG00000014697)	ENSMOCG00000000358	Med26 (ENSMOCG00000005830)	ENSMOCG00000001914	Tmem38a (ENSMOCG00000002946)	Nwd1 (ENSMOCG00000011227)	Sin3b (ENSMOCG00000000965)	ENSMOCG00000010660 ##19	Haus8 (ENSMOCG00000014837)	Myo9b (ENSMOCG00000008008)	Use1 (ENSMOCG00000020518)	Ocel1 (ENSMOCG00000000245)	Nr2f6 (ENSMOCG00000009684)	Ushbp1 (ENSMOCG00000006551)	Babam1 (ENSMOCG00000012788)	ENSMOCG00000018731	Ccdc88a (ENSMOCG00000014061)	Mtif2 (ENSMOCG00000012426)	ENSMOCG00000000716	Clhc1 (ENSMOCG00000016020)	ENSMOCG00000016183	Eml6 (ENSMOCG00000019298)	Sptbn1 (ENSMOCG00000008651)
Prairie vole	MODERN SPECIES	81	Scg5 (ENSMOCG00000012792)	Arhgap11a (ENSMOCG00000020456)	Gjd2 (ENSMOCG00000006516)	Actc1 (ENSMOCG00000021858)	Aqr (ENSMOCG00000001431)	Zfp770 (ENSMOCG00000010398)	Dph6 (ENSMOCG00000022193)	ENSMOCG00000008755	ENSMOCG00000002125	Cdin1 (ENSMOCG00000018908)	Meis2 (ENSMOCG00000000773)	Tmco5 (ENSMOCG00000018522)	Spred1 (ENSMOCG00000022559)	Fam98b (ENSMOCG00000019785)	Rasgrp1 (ENSMOCG00000020893)	ENSMOCG00000001025 ##19	Ptprj (ENSMOCG00000020009)	Nup160 (ENSMOCG00000015911)	Fnbp4 (ENSMOCG00000016333)	Agbl2 (ENSMOCG00000015547)	Mtch2 (ENSMOCG00000001577)	C1qtnf4 (ENSMOCG00000013500)	Ndufs3 (ENSMOCG00000009375)	Kbtbd4 (ENSMOCG00000021780)	Ptpmt1 (ENSMOCG00000018913)	Celf1 (ENSMOCG00000012633)	Rapsn (ENSMOCG00000012267)	Psmc3 (ENSMOCG00000001464)	ENSMOCG00000006097	ENSMOCG00000008195	Spi1 (ENSMOCG00000006114)
Northern American deer mouse	MODERN SPECIES	8	Hsh2d (ENSPEMG00000023449)	Cib3 (ENSPEMG00000008205)	Fam32a (ENSPEMG00000029420)	Ap1m1 (ENSPEMG00000023037)	Klf2 (ENSPEMG00000009733)	Eps15l1 (ENSPEMG00000023577)	Calr3 (ENSPEMG00000023150)	1700030K09Rik (ENSPEMG00000000757)	Cherp (ENSPEMG00000011238)	Slc35e1 (ENSPEMG00000027717)	ENSPEMG00000004236	Smim7 (ENSPEMG00000023935)	Tmem38a (ENSPEMG00000011307)	Nwd1 (ENSPEMG00000023600)	Sin3b (ENSPEMG00000001072)	F2rl3 (ENSPEMG00000007402) ##19	Haus8 (ENSPEMG00000007127)	Myo9b (ENSPEMG00000017128)	Use1 (ENSPEMG00000011298)	Ocel1 (ENSPEMG00000018587)	Nr2f6 (ENSPEMG00000000387)	Ushbp1 (ENSPEMG00000001924)	Babam1 (ENSPEMG00000014505)	Ankle1 (ENSPEMG00000019042)	ENSPEMG00000026982	Abhd8 (ENSPEMG00000010266)	Mrpl34 (ENSPEMG00000029638)	Dda1 (ENSPEMG00000026278)	Ano8 (ENSPEMG00000010814)	Gtpbp3 (ENSPEMG00000011836)	Plvap (ENSPEMG00000012586)
Murinae	ANCESTRAL SPECIES	42	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19
Mus	ANCESTRAL SPECIES	6	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mouse	MODERN SPECIES	17	Cib3 (ENSMUSG00000074240)	Fam32a (ENSMUSG00000003039)	Ap1m1 (ENSMUSG00000003033)	Hmgn2-ps (ENSMUSG00000070713)	Klf2 (ENSMUSG00000055148)	Eps15l1 (ENSMUSG00000006276)	Calr3 (ENSMUSG00000019732)	1700030K09Rik (ENSMUSG00000052794)	Cherp (ENSMUSG00000052488)	Slc35e1 (ENSMUSG00000019731)	Med26 (ENSMUSG00000045248)	Smim7 (ENSMUSG00000044600)	Tmem38a (ENSMUSG00000031791)	Nwd1 (ENSMUSG00000048148)	Sin3b (ENSMUSG00000031622)	F2rl3 (ENSMUSG00000050147) ##19	Large1 (ENSMUSG00000004383)	Isx (ENSMUSG00000031621)	Hmgxb4 (ENSMUSG00000034518)	Tom1 (ENSMUSG00000042870)	Hmox1 (ENSMUSG00000005413)	Mcm5 (ENSMUSG00000005410)	Rasd2 (ENSMUSG00000034472)	Gm10358 (ENSMUSG00000110469)	Iqcm (ENSMUSG00000031620)	Nr3c2 (ENSMUSG00000031618)	Arhgap10 (ENSMUSG00000037148)	Prmt9 (ENSMUSG00000037134)	Tmem184c (ENSMUSG00000031617)	Ednra (ENSMUSG00000031616)	Ttc29 (ENSMUSG00000037101)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Steppe mouse	MODERN SPECIES	2610														Nwd1 (ENSMSIG00000026898)	Sin3b (ENSMSIG00000026848)	F2rl3 (ENSMSIG00000026840) ##19	Large1 (ENSMSIG00000026806)	ENSMSIG00000026797
spretus	MODERN SPECIES	17	Cib3 (MGP_SPRETEiJ_G0032333)	Fam32a (MGP_SPRETEiJ_G0032334)	Ap1m1 (MGP_SPRETEiJ_G0032335)	Klf2 (MGP_SPRETEiJ_G0032336)	Eps15l1 (MGP_SPRETEiJ_G0032337)	2310002L09Rik (MGP_SPRETEiJ_G0032338)	Calr3 (MGP_SPRETEiJ_G0032339)	1700030K09Rik (MGP_SPRETEiJ_G0032340)	Cherp (MGP_SPRETEiJ_G0032341)	Slc35e1 (MGP_SPRETEiJ_G0032342)	Med26 (MGP_SPRETEiJ_G0032343)	Smim7 (MGP_SPRETEiJ_G0032344)	Tmem38a (MGP_SPRETEiJ_G0032345)	Nwd1 (MGP_SPRETEiJ_G0032346)	Sin3b (MGP_SPRETEiJ_G0032347)	F2rl3 (MGP_SPRETEiJ_G0032348) ##19	Large1 (MGP_SPRETEiJ_G0032349)	Isx (MGP_SPRETEiJ_G0032350)	Hmgxb4 (MGP_SPRETEiJ_G0032351)	Tom1 (MGP_SPRETEiJ_G0032352)	Hmox1 (MGP_SPRETEiJ_G0032353)	Mcm5 (MGP_SPRETEiJ_G0032354)	Rasd2 (MGP_SPRETEiJ_G0032355)	Iqcm (MGP_SPRETEiJ_G0032356)	Nr3c2 (MGP_SPRETEiJ_G0032357)	Arhgap10 (MGP_SPRETEiJ_G0032358)	Prmt9 (MGP_SPRETEiJ_G0032359)	Tmem184c (MGP_SPRETEiJ_G0032360)	Ednra (MGP_SPRETEiJ_G0032361)	Ttc29 (MGP_SPRETEiJ_G0032362)	Pou4f2 (MGP_SPRETEiJ_G0032363)
Ryukyu mouse	MODERN SPECIES	17	Hsh2d (MGP_CAROLIEiJ_G0031212)	Cib3 (MGP_CAROLIEiJ_G0031213)	Fam32a (MGP_CAROLIEiJ_G0031214)	Ap1m1 (MGP_CAROLIEiJ_G0031215)	Klf2 (MGP_CAROLIEiJ_G0031216)	Eps15l1 (MGP_CAROLIEiJ_G0031217)	Calr3 (MGP_CAROLIEiJ_G0031218)	1700030K09Rik (MGP_CAROLIEiJ_G0031219)	Cherp (MGP_CAROLIEiJ_G0031220)	Slc35e1 (MGP_CAROLIEiJ_G0031221)	Med26 (MGP_CAROLIEiJ_G0031222)	Smim7 (MGP_CAROLIEiJ_G0031223)	Tmem38a (MGP_CAROLIEiJ_G0031224)	Nwd1 (MGP_CAROLIEiJ_G0031225)	Sin3b (MGP_CAROLIEiJ_G0031226)	F2rl3 (MGP_CAROLIEiJ_G0031227) ##19	Large1 (MGP_CAROLIEiJ_G0031228)	Isx (MGP_CAROLIEiJ_G0031229)	MGP_CAROLIEiJ_G0031230	Tom1 (MGP_CAROLIEiJ_G0031231)	Hmox1 (MGP_CAROLIEiJ_G0031232)	Mcm5 (MGP_CAROLIEiJ_G0031233)	Rasd2 (MGP_CAROLIEiJ_G0031234)	Iqcm (MGP_CAROLIEiJ_G0031235)	Nr3c2 (MGP_CAROLIEiJ_G0031236)	Arhgap10 (MGP_CAROLIEiJ_G0031237)	Prmt9 (MGP_CAROLIEiJ_G0031238)	Tmem184c (MGP_CAROLIEiJ_G0031239)	Ednra (MGP_CAROLIEiJ_G0031240)	Ttc29 (MGP_CAROLIEiJ_G0031241)	Pou4f2 (MGP_CAROLIEiJ_G0031242)
Shrew mouse	MODERN SPECIES	10	Hsh2d (MGP_PahariEiJ_G0021677)	Cib3 (MGP_PahariEiJ_G0021678)	Fam32a (MGP_PahariEiJ_G0021679)	Ap1m1 (MGP_PahariEiJ_G0021680)	Klf2 (MGP_PahariEiJ_G0021681)	Eps15l1 (MGP_PahariEiJ_G0021682)	Calr3 (MGP_PahariEiJ_G0021683)	1700030K09Rik (MGP_PahariEiJ_G0021684)	Cherp (MGP_PahariEiJ_G0021685)	Slc35e1 (MGP_PahariEiJ_G0021686)	Med26 (MGP_PahariEiJ_G0021687)	Smim7 (MGP_PahariEiJ_G0021688)	Tmem38a (MGP_PahariEiJ_G0021689)	Nwd1 (MGP_PahariEiJ_G0021690)	Sin3b (MGP_PahariEiJ_G0021691)	F2rl3 (MGP_PahariEiJ_G0021692) ##19	Large1 (MGP_PahariEiJ_G0021693)	Isx (MGP_PahariEiJ_G0021694)	Hmgxb4 (MGP_PahariEiJ_G0021695)	Tom1 (MGP_PahariEiJ_G0021696)	Hmox1 (MGP_PahariEiJ_G0021697)	Mcm5 (MGP_PahariEiJ_G0021698)	Rasd2 (MGP_PahariEiJ_G0021699)
Rat	MODERN SPECIES	7	Hsh2d (ENSRNOG00000023614)	Cib3 (ENSRNOG00000014600)	Fam32a (ENSRNOG00000066630)	Ap1m1 (ENSRNOG00000014454)	Klf2 (ENSRNOG00000067705)	Eps15l1 (ENSRNOG00000013502)	Calr3 (ENSRNOG00000013260)	C16h19orf44 (ENSRNOG00000023700)	Cherp (ENSRNOG00000012323)	Slc35e1 (ENSRNOG00000012287)	Med26 (ENSRNOG00000012270)	Smim7 (ENSRNOG00000042037)	Tmem38a (ENSRNOG00000011912)	Nwd1 (ENSRNOG00000052129)	Sin3b (ENSRNOG00000048622)	F2rl3 (ENSRNOG00000068093) ##19	Sftpd (ENSRNOG00000056001)	Mbl1 (ENSRNOG00000011706)	Sftpa1 (ENSRNOG00000011438)	Mat1a (ENSRNOG00000011351)	Dydc1 (ENSRNOG00000011165)	Dydc2 (ENSRNOG00000039591)	Prxl2a (ENSRNOG00000011140)	Tspan14 (ENSRNOG00000010813)	Sh2d4b (ENSRNOG00000042623)	LOC100363321 (ENSRNOG00000062821)	ENSRNOG00000065936	RGD1564958 (ENSRNOG00000028958)	Nrg3 (ENSRNOG00000063450)	EloaA2l1 (ENSRNOG00000063161)	Eloa-ps1 (ENSRNOG00000067535)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Cib3 (ENSNGAG00000004267)	Fam32a (ENSNGAG00000021828)	Ap1m1 (ENSNGAG00000022674)	Klf2 (ENSNGAG00000022236)	Eps15l1 (ENSNGAG00000003492)	Calr3 (ENSNGAG00000022659)	1700030K09Rik (ENSNGAG00000022589)	Cherp (ENSNGAG00000023323)	Slc35e1 (ENSNGAG00000021910)	Med26 (ENSNGAG00000013875)	Smim7 (ENSNGAG00000019358)	Tmem38a (ENSNGAG00000016799)	Nwd1 (ENSNGAG00000016596)	ENSNGAG00000022598	Sin3b (ENSNGAG00000023179)	F2rl3 (ENSNGAG00000022079) ##19	Haus8 (ENSNGAG00000024287)	Myo9b (ENSNGAG00000019200)	Use1 (ENSNGAG00000011677)	Ocel1 (ENSNGAG00000012935)	Nr2f6 (ENSNGAG00000021444)	Ushbp1 (ENSNGAG00000002250)	Babam1 (ENSNGAG00000022383)	Abhd8 (ENSNGAG00000022805)	Mrpl34 (ENSNGAG00000018101)	ENSNGAG00000009898	Ano8 (ENSNGAG00000015730)	Gtpbp3 (ENSNGAG00000017920)	Ccdc194 (ENSNGAG00000012696)	Mvb12a (ENSNGAG00000023447)	Tmem221 (ENSNGAG00000020235)
Lesser Egyptian jerboa	MODERN SPECIES	127	Rab8a (ENSJJAG00000021959)	ENSJJAG00000018938	Fam32a (ENSJJAG00000022461)	Ap1m1 (ENSJJAG00000003963)	Klf2 (ENSJJAG00000019814)	Eps15l1 (ENSJJAG00000001243)	ENSJJAG00000008721	ENSJJAG00000012853	Calr3 (ENSJJAG00000019732)	Cherp (ENSJJAG00000017982)	Slc35e1 (ENSJJAG00000014718)	Med26 (ENSJJAG00000020010)	Smim7 (ENSJJAG00000000221)	Tmem38a (ENSJJAG00000013265)	Nwd1 (ENSJJAG00000017294)	F2rl3 (ENSJJAG00000008663) ##19	Haus8 (ENSJJAG00000016878)	Myo9b (ENSJJAG00000020924)	Use1 (ENSJJAG00000010584)	Nr2f6 (ENSJJAG00000010143)	Ushbp1 (ENSJJAG00000012065)	Ankle1 (ENSJJAG00000014888)	Abhd8 (ENSJJAG00000010342)	Mrpl34 (ENSJJAG00000018808)	Dda1 (ENSJJAG00000021059)	Ano8 (ENSJJAG00000011527)	Plvap (ENSJJAG00000000206)	Ccdc194 (ENSJJAG00000013119)	Mvb12a (ENSJJAG00000019047)	Atp13a1 (ENSJJAG00000010806)	Gmip (ENSJJAG00000013017)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Alpin marmot	MODERN SPECIES	360																ENSMMMG00000009818 ##19
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Arctic ground squirrel	MODERN SPECIES	73	ENSUPAG00010021728	CIB3 (ENSUPAG00010021724)	FAM32A (ENSUPAG00010021722)	AP1M1 (ENSUPAG00010021716)	KLF2 (ENSUPAG00010021714)	EPS15L1 (ENSUPAG00010021679)	CALR3 (ENSUPAG00010021675)	C19orf44 (ENSUPAG00010021668)	CHERP (ENSUPAG00010021662)	SLC35E1 (ENSUPAG00010021658)	MED26 (ENSUPAG00010021653)	ENSUPAG00010021646	TMEM38A (ENSUPAG00010021641)	NWD1 (ENSUPAG00010021632)	SIN3B (ENSUPAG00010021629)	F2RL3 (ENSUPAG00010021628) ##19	ENSUPAG00010021611	HAUS8 (ENSUPAG00010021606)	MYO9B (ENSUPAG00010019621)	USE1 (ENSUPAG00010019584)	ENSUPAG00010019579	NR2F6 (ENSUPAG00010019563)	USHBP1 (ENSUPAG00010019546)	BABAM1 (ENSUPAG00010019537)	ANKLE1 (ENSUPAG00010019507)	ABHD8 (ENSUPAG00010019500)	MRPL34 (ENSUPAG00010019490)	DDA1 (ENSUPAG00010019477)	ANO8 (ENSUPAG00010019468)	GTPBP3 (ENSUPAG00010019455)	PLVAP (ENSUPAG00010019443)
Eurasian red squirrel	MODERN SPECIES	7	HSH2D (ENSSVLG00005021858)	CIB3 (ENSSVLG00005021909)	FAM32A (ENSSVLG00005021993)	AP1M1 (ENSSVLG00005022090)	KLF2 (ENSSVLG00005022188)	EPS15L1 (ENSSVLG00005022241)	CALR3 (ENSSVLG00005022305)	C19orf44 (ENSSVLG00005022379)	CHERP (ENSSVLG00005022500)	SLC35E1 (ENSSVLG00005022541)	MED26 (ENSSVLG00005022596)	SMIM7 (ENSSVLG00005022628)	TMEM38A (ENSSVLG00005022680)	NWD1 (ENSSVLG00005022737)	SIN3B (ENSSVLG00005023096)	F2RL3 (ENSSVLG00005023189) ##19	ENSSVLG00005023226	ENSSVLG00005023298	MYO9B (ENSSVLG00005023423)	USE1 (ENSSVLG00005023596)	OCEL1 (ENSSVLG00005023629)	NR2F6 (ENSSVLG00005023666)	USHBP1 (ENSSVLG00005023704)	BABAM1 (ENSSVLG00005023831)	ANKLE1 (ENSSVLG00005023936)	ABHD8 (ENSSVLG00005024083)	MRPL34 (ENSSVLG00005024100)	DDA1 (ENSSVLG00005024124)	ANO8 (ENSSVLG00005024146)	GTPBP3 (ENSSVLG00005024183)	PLVAP (ENSSVLG00005024254)
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000042939	ENSHGLG00000003291	AP1M1 (ENSHGLG00000041098)	ENSHGLG00000047567	EPS15L1 (ENSHGLG00000005235)	ENSHGLG00000003381	CHERP (ENSHGLG00000002993)	SLC35E1 (ENSHGLG00000002832)	MED26 (ENSHGLG00000003432)	SMIM7 (ENSHGLG00000042613)	TMEM38A (ENSHGLG00000037186)	ENSHGLG00000003523	ENSHGLG00000032289	ENSHGLG00000045689	ENSHGLG00000034515	F2RL3 (ENSHGLG00000033959) ##19	HAUS8 (ENSHGLG00000041972)	USE1 (ENSHGLG00000031898)	OCEL1 (ENSHGLG00000049763)	ENSHGLG00000050133	ENSHGLG00000049805	ENSHGLG00000005587	BABAM1 (ENSHGLG00000003989)	ENSHGLG00000003677	ENSHGLG00000038028	MRPL34 (ENSHGLG00000048306)	ENSHGLG00000050823	ENSHGLG00000045856	GTPBP3 (ENSHGLG00000002806)	ENSHGLG00000050162	ENSHGLG00000044674
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Guinea pig	MODERN SPECIES	86	ENSCPOG00000031458	ENSCPOG00000030401	FAM32A (ENSCPOG00000036282)	AP1M1 (ENSCPOG00000003653)	ENSCPOG00000025120	EPS15L1 (ENSCPOG00000010394)	CALR3 (ENSCPOG00000009145)	ENSCPOG00000021179	CHERP (ENSCPOG00000019949)	SLC35E1 (ENSCPOG00000008975)	MED26 (ENSCPOG00000032983)	SMIM7 (ENSCPOG00000039863)	TMEM38A (ENSCPOG00000026018)	NWD1 (ENSCPOG00000024668)	SIN3B (ENSCPOG00000025963)	F2RL3 (ENSCPOG00000040487) ##19	HAUS8 (ENSCPOG00000023189)	MYO9B (ENSCPOG00000022307)	USE1 (ENSCPOG00000024594)	ENSCPOG00000007032	NR2F6 (ENSCPOG00000025861)	BABAM1 (ENSCPOG00000006927)	ANKLE1 (ENSCPOG00000006932)	ABHD8 (ENSCPOG00000006938)	MRPL34 (ENSCPOG00000038177)	DDA1 (ENSCPOG00000006944)	ANO8 (ENSCPOG00000006946)	GTPBP3 (ENSCPOG00000027093)	ENSCPOG00000006951	CCDC194 (ENSCPOG00000036327)	MVB12A (ENSCPOG00000004492)
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Long-tailed chinchilla	MODERN SPECIES	231	TPM4 (ENSCLAG00000006213)	RAB8A (ENSCLAG00000006073)	HSH2D (ENSCLAG00000005020)	CIB3 (ENSCLAG00000004966)	FAM32A (ENSCLAG00000004833)	ENSCLAG00000004795	EPS15L1 (ENSCLAG00000003824)	CALR3 (ENSCLAG00000003434)	ENSCLAG00000005950	CHERP (ENSCLAG00000005484)	SLC35E1 (ENSCLAG00000005367)	MED26 (ENSCLAG00000005164)	TMEM38A (ENSCLAG00000004970)	NWD1 (ENSCLAG00000007464)	SIN3B (ENSCLAG00000006937)	F2RL3 (ENSCLAG00000006791) ##19	MYO9B (ENSCLAG00000006247)	USE1 (ENSCLAG00000006857)	ENSCLAG00000006628	USHBP1 (ENSCLAG00000006311)	BABAM1 (ENSCLAG00000006202)	ABHD8 (ENSCLAG00000008511)	MRPL34 (ENSCLAG00000008278)	DDA1 (ENSCLAG00000008060)	ANO8 (ENSCLAG00000008087)	PLVAP (ENSCLAG00000008012)	MVB12A (ENSCLAG00000007762)	ENSCLAG00000007691	NXNL1 (ENSCLAG00000007147)	SLC27A1 (ENSCLAG00000007064)	PGLS (ENSCLAG00000006976)
Degu	MODERN SPECIES	345	TPM4 (ENSODEG00000001342)	RAB8A (ENSODEG00000001241)	ENSODEG00000001251	CIB3 (ENSODEG00000001268)	ENSODEG00000001275	AP1M1 (ENSODEG00000001296)	EPS15L1 (ENSODEG00000001383)	ENSODEG00000001503	CHERP (ENSODEG00000001528)	SLC35E1 (ENSODEG00000001560)	MED26 (ENSODEG00000001579)	SMIM7 (ENSODEG00000001606)	TMEM38A (ENSODEG00000001632)	NWD1 (ENSODEG00000001676)	SIN3B (ENSODEG00000001769)	F2RL3 (ENSODEG00000001898) ##19	ENSODEG00000001912	MYO9B (ENSODEG00000002010)	USE1 (ENSODEG00000002167)	ENSODEG00000002226	NR2F6 (ENSODEG00000002243)	USHBP1 (ENSODEG00000001357)	BABAM1 (ENSODEG00000001401)	ANKLE1 (ENSODEG00000001442)	ABHD8 (ENSODEG00000001471)	MRPL34 (ENSODEG00000001492)	ENSODEG00000001501	ANO8 (ENSODEG00000001546)	ENSODEG00000001637	CCDC194 (ENSODEG00000001653)	ENSODEG00000001667
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Suina	ANCESTRAL SPECIES	39	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Chacoan peccary	MODERN SPECIES	769	HSH2D (ENSCWAG00000008454)	CIB3 (ENSCWAG00000008526)	ENSCWAG00000008644	AP1M1 (ENSCWAG00000008740)	KLF2 (ENSCWAG00000009049)	EPS15L1 (ENSCWAG00000009107)	CALR3 (ENSCWAG00000009717)	C19orf44 (ENSCWAG00000009784)	CHERP (ENSCWAG00000009961)	SLC35E1 (ENSCWAG00000010004)	MED26 (ENSCWAG00000010054)	SMIM7 (ENSCWAG00000010095)	TMEM38A (ENSCWAG00000010149)	NWD1 (ENSCWAG00000010212)	SIN3B (ENSCWAG00000010640)	F2RL3 (ENSCWAG00000010803) ##19	ENSCWAG00000010842	HAUS8 (ENSCWAG00000010935)	MYO9B (ENSCWAG00000011012)	OCEL1 (ENSCWAG00000011522)	NR2F6 (ENSCWAG00000011551)	USHBP1 (ENSCWAG00000011598)	BABAM1 (ENSCWAG00000011719)	ANKLE1 (ENSCWAG00000011822)	ABHD8 (ENSCWAG00000012301)	MRPL34 (ENSCWAG00000012336)	DDA1 (ENSCWAG00000012385)	ANO8 (ENSCWAG00000012420)	GTPBP3 (ENSCWAG00000012458)	PLVAP (ENSCWAG00000012865)	CCDC194 (ENSCWAG00000012943)
Pig	MODERN SPECIES	10	HSH2D (ENSSSCG00000013853)	CIB3 (ENSSSCG00000055450)	FAM32A (ENSSSCG00000013855)	AP1M1 (ENSSSCG00000013856)	KLF2 (ENSSSCG00000038911)	EPS15L1 (ENSSSCG00000013857)	CALR3 (ENSSSCG00000013858)	C19orf44 (ENSSSCG00000013859)	CHERP (ENSSSCG00000013860)	SLC35E1 (ENSSSCG00000013861)	MED26 (ENSSSCG00000013862)	SMIM7 (ENSSSCG00000013863)	TMEM38A (ENSSSCG00000013864)	NWD1 (ENSSSCG00000013865)	SIN3B (ENSSSCG00000013867)	F2RL3 (ENSSSCG00000013868) ##19	CPAMD8 (ENSSSCG00000013869)	HAUS8 (ENSSSCG00000036584)	MYO9B (ENSSSCG00000013876)	USE1 (ENSSSCG00000013875)	OCEL1 (ENSSSCG00000013874)	NR2F6 (ENSSSCG00000013873)	USHBP1 (ENSSSCG00000036575)	BABAM1 (ENSSSCG00000031073)	ANKLE1 (ENSSSCG00000037099)	ABHD8 (ENSSSCG00000031877)	MRPL34 (ENSSSCG00000039295)	DDA1 (ENSSSCG00000031251)	ANO8 (ENSSSCG00000039330)	GTPBP3 (ENSSSCG00000038440)	PLVAP (ENSSSCG00000037025)
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Camelidae	ANCESTRAL SPECIES	64	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00940000171473	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Arabian camel	MODERN SPECIES	14	HSH2D (ENSCDRG00005021516)	CIB3 (ENSCDRG00005021511)	FAM32A (ENSCDRG00005021508)	AP1M1 (ENSCDRG00005021495)	ENSCDRG00005021486	EPS15L1 (ENSCDRG00005021471)	CALR3 (ENSCDRG00005021458)	C19orf44 (ENSCDRG00005021450)	CHERP (ENSCDRG00005021438)	SLC35E1 (ENSCDRG00005021428)	MED26 (ENSCDRG00005021423)	ENSCDRG00005021418	TMEM38A (ENSCDRG00005021413)	NWD1 (ENSCDRG00005021355)	SIN3B (ENSCDRG00005021342)	F2RL3 (ENSCDRG00005021339) ##19	CPAMD8 (ENSCDRG00005021310)	HAUS8 (ENSCDRG00005021295)	MYO9B (ENSCDRG00005016857)	USE1 (ENSCDRG00005016169)	ENSCDRG00005016126	NR2F6 (ENSCDRG00005016096)	USHBP1 (ENSCDRG00005015824)	BABAM1 (ENSCDRG00005015746)	ANKLE1 (ENSCDRG00005015708)	ABHD8 (ENSCDRG00005015688)	ENSCDRG00005015656	DDA1 (ENSCDRG00005015627)	ANO8 (ENSCDRG00005015573)	GTPBP3 (ENSCDRG00005015456)	PLVAP (ENSCDRG00005015397)
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845.md	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845.md	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845.ld.b	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000177900	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845.ld.b	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Beluga whale	MODERN SPECIES	27	FAM32A (ENSDLEG00000007565)	AP1M1 (ENSDLEG00000007571)	KLF2 (ENSDLEG00000007589)	EPS15L1 (ENSDLEG00000007611)	CALR3 (ENSDLEG00000000040)	ENSDLEG00000000052	ENSDLEG00000000062	CHERP (ENSDLEG00000000145)	SLC35E1 (ENSDLEG00000000542)	MED26 (ENSDLEG00000000558)	ENSDLEG00000000572	TMEM38A (ENSDLEG00000000590)	ENSDLEG00000000598	ENSDLEG00000000617	SIN3B (ENSDLEG00000000669)	F2RL3 (ENSDLEG00000000796) ##19	CPAMD8 (ENSDLEG00000000827)	HAUS8 (ENSDLEG00000000946)	MYO9B (ENSDLEG00000001055)	USE1 (ENSDLEG00000001286)	ENSDLEG00000001322	NR2F6 (ENSDLEG00000001328)	USHBP1 (ENSDLEG00000001348)	BABAM1 (ENSDLEG00000001404)	ANKLE1 (ENSDLEG00000001418)	ABHD8 (ENSDLEG00000001497)	MRPL34 (ENSDLEG00000001507)	ENSDLEG00000001517	ANO8 (ENSDLEG00000001536)	GTPBP3 (ENSDLEG00000001561)	PLVAP (ENSDLEG00000001574)
Narwhal	MODERN SPECIES	298	CIB3 (ENSMMNG00015003673)	FAM32A (ENSMMNG00015003638)	AP1M1 (ENSMMNG00015003576)	KLF2 (ENSMMNG00015003540)	EPS15L1 (ENSMMNG00015003374)	CALR3 (ENSMMNG00015003287)	C19orf44 (ENSMMNG00015003248)	CHERP (ENSMMNG00015003215)	SLC35E1 (ENSMMNG00015003184)	MED26 (ENSMMNG00015003169)	SMIM7 (ENSMMNG00015003142)	TMEM38A (ENSMMNG00015003105)	ENSMMNG00015003083	ENSMMNG00015003065	SIN3B (ENSMMNG00015003000)	F2RL3 (ENSMMNG00015002969) ##19	ENSMMNG00015002951	HAUS8 (ENSMMNG00015002915)	MYO9B (ENSMMNG00015002729)	USE1 (ENSMMNG00015002651)	ENSMMNG00015002621	NR2F6 (ENSMMNG00015002593)	USHBP1 (ENSMMNG00015002540)	BABAM1 (ENSMMNG00015002480)	ANKLE1 (ENSMMNG00015002389)	ABHD8 (ENSMMNG00015002331)	MRPL34 (ENSMMNG00015002309)	DDA1 (ENSMMNG00015002288)	ANO8 (ENSMMNG00015002241)	GTPBP3 (ENSMMNG00015002166)	PLVAP (ENSMMNG00015002138)
Vaquita	MODERN SPECIES	14	RAB8A (ENSPSNG00000001927)	HSH2D (ENSPSNG00000001906)	CIB3 (ENSPSNG00000001871)	FAM32A (ENSPSNG00000001837)	AP1M1 (ENSPSNG00000001782)	KLF2 (ENSPSNG00000001738)	EPS15L1 (ENSPSNG00000001575)	CALR3 (ENSPSNG00000001442)	C19orf44 (ENSPSNG00000001424)	CHERP (ENSPSNG00000001401)	SLC35E1 (ENSPSNG00000001374)	MED26 (ENSPSNG00000001357)	SMIM7 (ENSPSNG00000001334)	TMEM38A (ENSPSNG00000001298)	SIN3B (ENSPSNG00000001166)	F2RL3 (ENSPSNG00000001140) ##19	ENSPSNG00000001120	HAUS8 (ENSPSNG00000001098)	MYO9B (ENSPSNG00000001059)	USE1 (ENSPSNG00000001004)	ENSPSNG00000000961	NR2F6 (ENSPSNG00000000940)	USHBP1 (ENSPSNG00000000887)	BABAM1 (ENSPSNG00000000844)	ANKLE1 (ENSPSNG00000000762)	ABHD8 (ENSPSNG00000000690)	MRPL34 (ENSPSNG00000000675)	DDA1 (ENSPSNG00000000659)	ANO8 (ENSPSNG00000000634)	GTPBP3 (ENSPSNG00000000563)	PLVAP (ENSPSNG00000000513)
Dolphin	MODERN SPECIES	724							CALR3 (ENSTTRG00000014988)	C19orf44 (ENSTTRG00000014994)	CHERP (ENSTTRG00000015006)	SLC35E1 (ENSTTRG00000015013)	MED26 (ENSTTRG00000015017)	SMIM7 (ENSTTRG00000015020)	TMEM38A (ENSTTRG00000015022)	NWD1 (ENSTTRG00000015023)	SIN3B (ENSTTRG00000015025)	F2RL3 (ENSTTRG00000015026) ##19	CPAMD8 (ENSTTRG00000015027)
Sperm whale	MODERN SPECIES	11	ENSPCTG00005007075	ENSPCTG00005007090	ENSPCTG00005007098	TPM4 (ENSPCTG00005007197)	HSH2D (ENSPCTG00005007400)	CIB3 (ENSPCTG00005007426)	FAM32A (ENSPCTG00005007496)	AP1M1 (ENSPCTG00005007569)	KLF2 (ENSPCTG00005007724)	EPS15L1 (ENSPCTG00005007761)	CALR3 (ENSPCTG00005007863)	C19orf44 (ENSPCTG00005007900)	TMEM38A (ENSPCTG00005007925)	NWD1 (ENSPCTG00005007947)	SIN3B (ENSPCTG00005008035)	F2RL3 (ENSPCTG00005008169) ##19	ENSPCTG00005008192	ENSPCTG00005008241	HAUS8 (ENSPCTG00005008257)	ENSPCTG00005008284	KCNN1 (ENSPCTG00005008359)	UNC13A (ENSPCTG00005008632)	MAP1S (ENSPCTG00005011006)	PGPEP1 (ENSPCTG00005011099)	ENSPCTG00005011193	KLHL26 (ENSPCTG00005011236)	COMP (ENSPCTG00005011285)	CRTC1 (ENSPCTG00005011514)	BORCS8 (ENSPCTG00005011972)	RFXANK (ENSPCTG00005012057)	NR2C2AP (ENSPCTG00005012090)
Blue whale	MODERN SPECIES	14	CIB3 (ENSBMSG00010006392)	FAM32A (ENSBMSG00010006374)	AP1M1 (ENSBMSG00010006345)	KLF2 (ENSBMSG00010006321)	EPS15L1 (ENSBMSG00010006235)	CALR3 (ENSBMSG00010006202)	C19orf44 (ENSBMSG00010006183)	CHERP (ENSBMSG00010006159)	SLC35E1 (ENSBMSG00010006147)	MED26 (ENSBMSG00010006136)	SMIM7 (ENSBMSG00010006116)	TMEM38A (ENSBMSG00010006085)	ENSBMSG00010006065	NWD1 (ENSBMSG00010006039)	SIN3B (ENSBMSG00010005984)	F2RL3 (ENSBMSG00010005963) ##19	ENSBMSG00010005944	HAUS8 (ENSBMSG00010005924)	MYO9B (ENSBMSG00010005892)	USE1 (ENSBMSG00010005863)	ENSBMSG00010005846	NR2F6 (ENSBMSG00010005831)	USHBP1 (ENSBMSG00010005784)	BABAM1 (ENSBMSG00010005753)	ENSBMSG00010005730	ABHD8 (ENSBMSG00010005717)	MRPL34 (ENSBMSG00010005709)	ANO8 (ENSBMSG00010005676)	GTPBP3 (ENSBMSG00010005635)	PLVAP (ENSBMSG00010005610)	CCDC194 (ENSBMSG00010005600)
Pecora	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Yarkand deer	MODERN SPECIES	32	HSH2D (ENSCHYG00000002499)	CIB3 (ENSCHYG00000002478)	ENSCHYG00000002452	AP1M1 (ENSCHYG00000002379)	KLF2 (ENSCHYG00000002284)	EPS15L1 (ENSCHYG00000002153)	CALR3 (ENSCHYG00000002071)	ENSCHYG00000002057	C19orf44 (ENSCHYG00000002039)	CHERP (ENSCHYG00000002017)	SLC35E1 (ENSCHYG00000001989)	MED26 (ENSCHYG00000001946)	TMEM38A (ENSCHYG00000001899)	NWD1 (ENSCHYG00000001771)	SIN3B (ENSCHYG00000001628)	F2RL3 (ENSCHYG00000001584) ##19	ENSCHYG00000001563	HAUS8 (ENSCHYG00000001537)	MYO9B (ENSCHYG00000001262)	USE1 (ENSCHYG00000001161)	ENSCHYG00000001124	NR2F6 (ENSCHYG00000001111)	USHBP1 (ENSCHYG00000001050)	BABAM1 (ENSCHYG00000001004)	ANKLE1 (ENSCHYG00000000986)	ABHD8 (ENSCHYG00000000967)	MRPL34 (ENSCHYG00000000960)	DDA1 (ENSCHYG00000000948)	ANO8 (ENSCHYG00000000887)	GTPBP3 (ENSCHYG00000000820)	PLVAP (ENSCHYG00000000785)
Percora_a	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Bovidae	ANCESTRAL SPECIES		ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.o.a	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Bos	ANCESTRAL SPECIES	34	ENSGT00940000160466	ENSGT00390000013811.l	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.o.a	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000160466	ENSGT00390000013811.l	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.o.a	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Cow	MODERN SPECIES	26	CIB3 (ENSBTAG00000016179)	FAM32A (ENSBTAG00000046846)	AP1M1 (ENSBTAG00000013329)	KLF2 (ENSBTAG00000052504)	EPS15L1 (ENSBTAG00000009990)	CALR3 (ENSBTAG00000033222)	ENSBTAG00000027878	C7H19orf44 (ENSBTAG00000002447)	CHERP (ENSBTAG00000005289)	SLC35E1 (ENSBTAG00000005295)	MED26 (ENSBTAG00000005312)	SMIM7 (ENSBTAG00000013613)	TMEM38A (ENSBTAG00000013614)	NWD1 (ENSBTAG00000009328)	SIN3B (ENSBTAG00000009330)	F2RL3 (ENSBTAG00000033278) ##19	CPAMD8 (ENSBTAG00000009331)	HAUS8 (ENSBTAG00000007366)	MYO9B (ENSBTAG00000011125)	USE1 (ENSBTAG00000011134)	OCEL1 (ENSBTAG00000011135)	NR2F6 (ENSBTAG00000011136)	USHBP1 (ENSBTAG00000015108)	BABAM1 (ENSBTAG00000012587)	ANKLE1 (ENSBTAG00000012592)	ABHD8 (ENSBTAG00000025809)	MRPL34 (ENSBTAG00000014579)	DDA1 (ENSBTAG00000017068)	ANO8 (ENSBTAG00000017074)	GTPBP3 (ENSBTAG00000004200)	PLVAP (ENSBTAG00000005434)
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005002600	AP1M1 (ENSBIXG00005000096)	ENSBIXG00005016253	KLF2 (ENSBIXG00005016244)	EPS15L1 (ENSBIXG00005016176)	CALR3 (ENSBIXG00005002541)	ENSBIXG00005002534	C19orf44 (ENSBIXG00005015971)	CHERP (ENSBIXG00005015964)	SLC35E1 (ENSBIXG00005015934)	MED26 (ENSBIXG00005002507)	SMIM7 (ENSBIXG00005015886)	TMEM38A (ENSBIXG00005015850)	NWD1 (ENSBIXG00005015837)	SIN3B (ENSBIXG00005015805)	F2RL3 (ENSBIXG00005015783) ##19	CPAMD8 (ENSBIXG00005002461)	HAUS8 (ENSBIXG00005015727)	MYO9B (ENSBIXG00005015690)	USE1 (ENSBIXG00005006346)	OCEL1 (ENSBIXG00005002348)	NR2F6 (ENSBIXG00005015582)	USHBP1 (ENSBIXG00005015565)	BABAM1 (ENSBIXG00005015501)	ANKLE1 (ENSBIXG00005002276)	ABHD8 (ENSBIXG00005006561)	DDA1 (ENSBIXG00005015379)	ANO8 (ENSBIXG00005002255)	GTPBP3 (ENSBIXG00005015344)	PLVAP (ENSBIXG00005015264)	CCDC194 (ENSBIXG00005015250)
Bos_a	ANCESTRAL SPECIES	29	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.l	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j.o.a	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Domestic yak	MODERN SPECIES	27	ENSBGRG00000011352	AP1M1 (ENSBGRG00000011574)	KLF2 (ENSBGRG00000012120)	EPS15L1 (ENSBGRG00000012185)	CALR3 (ENSBGRG00000013489)	ENSBGRG00000013593	C19orf44 (ENSBGRG00000013614)	CHERP (ENSBGRG00000013675)	SLC35E1 (ENSBGRG00000014574)	MED26 (ENSBGRG00000014660)	ENSBGRG00000014733	SMIM7 (ENSBGRG00000014759)	TMEM38A (ENSBGRG00000015036)	NWD1 (ENSBGRG00000015180)	SIN3B (ENSBGRG00000016151)	F2RL3 (ENSBGRG00000016706) ##19	ENSBGRG00000016753	HAUS8 (ENSBGRG00000016901)	MYO9B (ENSBGRG00000017208)	ENSBGRG00000024426	OCEL1 (ENSBGRG00000024486)	NR2F6 (ENSBGRG00000024506)	USHBP1 (ENSBGRG00000024543)	BABAM1 (ENSBGRG00000024682)	ABHD8 (ENSBGRG00000024888)	MRPL34 (ENSBGRG00000024909)	DDA1 (ENSBGRG00000024920)	ANO8 (ENSBGRG00000024938)	GTPBP3 (ENSBGRG00000024997)	PLVAP (ENSBGRG00000025077)	CCDC194 (ENSBGRG00000025103)
American bison	MODERN SPECIES	3138	CIB3 (ENSBBBG00000002506)	ENSBBBG00000001765	AP1M1 (ENSBBBG00000012827)	ENSBBBG00000012776	EPS15L1 (ENSBBBG00000012765)	CALR3 (ENSBBBG00000012660)	ENSBBBG00000012617	C19orf44 (ENSBBBG00000012609)	CHERP (ENSBBBG00000012600)	SLC35E1 (ENSBBBG00000012572)	MED26 (ENSBBBG00000012563)	SMIM7 (ENSBBBG00000012541)	TMEM38A (ENSBBBG00000002393)	NWD1 (ENSBBBG00000012497)	SIN3B (ENSBBBG00000012458)	F2RL3 (ENSBBBG00000002379) ##19	ENSBBBG00000012431	HAUS8 (ENSBBBG00000012407)	MYO9B (ENSBBBG00000012366)	USE1 (ENSBBBG00000011840)	ENSBBBG00000011824	USHBP1 (ENSBBBG00000011818)	BABAM1 (ENSBBBG00000011781)	ANKLE1 (ENSBBBG00000002178)	ABHD8 (ENSBBBG00000002174)	MRPL34 (ENSBBBG00000011730)	ENSBBBG00000011724	ANO8 (ENSBBBG00000011716)	GTPBP3 (ENSBBBG00000011649)	PLVAP (ENSBBBG00000007023)	CCDC194 (ENSBBBG00000011597)
Caprinae	ANCESTRAL SPECIES	32	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Goat	MODERN SPECIES	26	CIB3 (ENSCHIG00000026288)	ENSCHIG00000020839	AP1M1 (ENSCHIG00000015265)	KLF2 (ENSCHIG00000008795)	EPS15L1 (ENSCHIG00000018388)	CALR3 (ENSCHIG00000015217)	ENSCHIG00000026964	ENSCHIG00000023160	CHERP (ENSCHIG00000013765)	SLC35E1 (ENSCHIG00000008462)	MED26 (ENSCHIG00000025800)	SMIM7 (ENSCHIG00000026993)	TMEM38A (ENSCHIG00000024027)	NWD1 (ENSCHIG00000009765)	SIN3B (ENSCHIG00000016199)	F2RL3 (ENSCHIG00000014315) ##19	ENSCHIG00000004512	ENSCHIG00000011798	ENSCHIG00000012784	MYO9B (ENSCHIG00000011652)	PLVAP (ENSCHIG00000021053)	USE1 (ENSCHIG00000026958)	ENSCHIG00000020685	NR2F6 (ENSCHIG00000026142)	USHBP1 (ENSCHIG00000019994)	BABAM1 (ENSCHIG00000024953)	ANKLE1 (ENSCHIG00000019070)	ABHD8 (ENSCHIG00000019222)	MRPL34 (ENSCHIG00000014263)	DDA1 (ENSCHIG00000014785)	ANO8 (ENSCHIG00000019436)
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020018500	CIB3 (ENSOARG00020018403)	FAM32A (ENSOARG00020018302)	AP1M1 (ENSOARG00020017923)	KLF2 (ENSOARG00020017838)	EPS15L1 (ENSOARG00020016263)	CALR3 (ENSOARG00020016117)	C19orf44 (ENSOARG00020016066)	CHERP (ENSOARG00020015998)	SLC35E1 (ENSOARG00020015942)	MED26 (ENSOARG00020015901)	SMIM7 (ENSOARG00020015755)	TMEM38A (ENSOARG00020015674)	NWD1 (ENSOARG00020014908)	SIN3B (ENSOARG00020014654)	F2RL3 (ENSOARG00020014589) ##19	ENSOARG00020014420	ENSOARG00020014343	MYO9B (ENSOARG00020012985)	USE1 (ENSOARG00020012823)	ENSOARG00020012755	NR2F6 (ENSOARG00020012694)	USHBP1 (ENSOARG00020012433)	BABAM1 (ENSOARG00020012326)	ANKLE1 (ENSOARG00020011788)	ABHD8 (ENSOARG00020011690)	MRPL34 (ENSOARG00020011633)	DDA1 (ENSOARG00020011597)	ANO8 (ENSOARG00020011422)	GTPBP3 (ENSOARG00020011201)	PLVAP (ENSOARG00020011074)
Siberian musk deer	MODERN SPECIES	1231	CIB3 (ENSMMSG00000014086)	ENSMMSG00000014124	AP1M1 (ENSMMSG00000014184)	KLF2 (ENSMMSG00000014385)	EPS15L1 (ENSMMSG00000014438)	CALR3 (ENSMMSG00000014716)	C19orf44 (ENSMMSG00000014736)	ENSMMSG00000014756	CHERP (ENSMMSG00000014766)	SLC35E1 (ENSMMSG00000014784)	MED26 (ENSMMSG00000014806)	ENSMMSG00000014824	TMEM38A (ENSMMSG00000014854)	NWD1 (ENSMMSG00000014904)	SIN3B (ENSMMSG00000015118)	F2RL3 (ENSMMSG00000015189) ##19	CPAMD8 (ENSMMSG00000015238)	HAUS8 (ENSMMSG00000015527)	MYO9B (ENSMMSG00000015645)	USE1 (ENSMMSG00000016000)	ENSMMSG00000016046	NR2F6 (ENSMMSG00000016062)	USHBP1 (ENSMMSG00000016091)	BABAM1 (ENSMMSG00000016195)	ANKLE1 (ENSMMSG00000016269)	ABHD8 (ENSMMSG00000016667)	ENSMMSG00000016706	DDA1 (ENSMMSG00000016739)	ANO8 (ENSMMSG00000016774)	GTPBP3 (ENSMMSG00000016921)	PLVAP (ENSMMSG00000017042)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT01030000236338	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00940000171473	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Ursus	ANCESTRAL SPECIES	5										ENSGT00390000000259	ENSGT00940000171473	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240.i	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
American black bear	MODERN SPECIES	801																F2RL3 (ENSUAMG00000011584) ##19	ENSUAMG00000011578	HAUS8 (ENSUAMG00000011569)	MYO9B (ENSUAMG00000011561)	USE1 (ENSUAMG00000011555)	OCEL1 (ENSUAMG00000011551)	NR2F6 (ENSUAMG00000011548)	USHBP1 (ENSUAMG00000011546)	BABAM1 (ENSUAMG00000011545)	ANKLE1 (ENSUAMG00000011542)	ABHD8 (ENSUAMG00000011538)	ENSUAMG00000011536	ENSUAMG00000011533
Giant Panda	MODERN SPECIES	14	HSH2D (ENSAMEG00000009875)	CIB3 (ENSAMEG00000009877)	FAM32A (ENSAMEG00000030487)	AP1M1 (ENSAMEG00000009898)	ENSAMEG00000009942	EPS15L1 (ENSAMEG00000009945)	CALR3 (ENSAMEG00000009994)	C19orf44 (ENSAMEG00000010044)	CHERP (ENSAMEG00000010048)	SLC35E1 (ENSAMEG00000010089)	MED26 (ENSAMEG00000028493)	ENSAMEG00000028498	TMEM38A (ENSAMEG00000026882)	NWD1 (ENSAMEG00000010118)	SIN3B (ENSAMEG00000010148)	F2RL3 (ENSAMEG00000010196) ##19	CPAMD8 (ENSAMEG00000010204)	HAUS8 (ENSAMEG00000010225)	MYO9B (ENSAMEG00000010241)	USE1 (ENSAMEG00000030062)	OCEL1 (ENSAMEG00000010363)	NR2F6 (ENSAMEG00000010370)	USHBP1 (ENSAMEG00000010396)	BABAM1 (ENSAMEG00000010423)	ANKLE1 (ENSAMEG00000010455)	ABHD8 (ENSAMEG00000010469)	MRPL34 (ENSAMEG00000030065)	DDA1 (ENSAMEG00000029322)	ANO8 (ENSAMEG00000028701)	GTPBP3 (ENSAMEG00000010489)	PLVAP (ENSAMEG00000010513)
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a.d	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
American mink	MODERN SPECIES	58	CIB3 (ENSNVIG00000012192)	FAM32A (ENSNVIG00000012240)	AP1M1 (ENSNVIG00000012262)	KLF2 (ENSNVIG00000012328)	EPS15L1 (ENSNVIG00000012435)	CALR3 (ENSNVIG00000015169)	C19orf44 (ENSNVIG00000015206)	CHERP (ENSNVIG00000015269)	SLC35E1 (ENSNVIG00000015315)	MED26 (ENSNVIG00000015329)	SMIM7 (ENSNVIG00000015340)	TMEM38A (ENSNVIG00000015373)	ENSNVIG00000015386	NWD1 (ENSNVIG00000015394)	SIN3B (ENSNVIG00000015425)	F2RL3 (ENSNVIG00000015497) ##19	ENSNVIG00000015521	HAUS8 (ENSNVIG00000015548)	MYO9B (ENSNVIG00000015587)	USE1 (ENSNVIG00000015714)	OCEL1 (ENSNVIG00000015761)	NR2F6 (ENSNVIG00000015777)	USHBP1 (ENSNVIG00000015799)	BABAM1 (ENSNVIG00000015847)	ANKLE1 (ENSNVIG00000015900)	ABHD8 (ENSNVIG00000015935)	RM34 (ENSNVIG00000015947)	DDA1 (ENSNVIG00000015957)	ANO8 (ENSNVIG00000015964)	GTPBP3 (ENSNVIG00000016000)	PLVAP (ENSNVIG00000016032)
Ferret	MODERN SPECIES	238	TPM4 (ENSMPUG00000016054)	RAB8A (ENSMPUG00000016053)	HSH2D (ENSMPUG00000016050)	CIB3 (ENSMPUG00000016049)	FAM32A (ENSMPUG00000016048)	AP1M1 (ENSMPUG00000016047)	EPS15L1 (ENSMPUG00000016046)	CALR3 (ENSMPUG00000016034)	C19orf44 (ENSMPUG00000016031)	CHERP (ENSMPUG00000016023)	SLC35E1 (ENSMPUG00000016022)	MED26 (ENSMPUG00000016021)	TMEM38A (ENSMPUG00000016018)	NWD1 (ENSMPUG00000016016)	SIN3B (ENSMPUG00000016012)	F2RL3 (ENSMPUG00000016009) ##19	CPAMD8 (ENSMPUG00000015978)	HAUS8 (ENSMPUG00000015966)	MYO9B (ENSMPUG00000015959)	USE1 (ENSMPUG00000015933)	OCEL1 (ENSMPUG00000015927)	NR2F6 (ENSMPUG00000015918)	USHBP1 (ENSMPUG00000015913)	BABAM1 (ENSMPUG00000015909)	ANKLE1 (ENSMPUG00000015908)	ABHD8 (ENSMPUG00000015907)	MRPL34 (ENSMPUG00000015905)	DDA1 (ENSMPUG00000015904)	ENSMPUG00000019666	ANO8 (ENSMPUG00000015902)	GTPBP3 (ENSMPUG00000015889)
Canidae	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b.c.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.i.a.a	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b.c.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000009113.a.a.q.a.a	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.i.a.a	ENSGT00940000157019	ENSGT00390000016851
Dog	MODERN SPECIES	12	RAB8A (ENSCAFG00845030471)	HSH2D (ENSCAFG00845030401)	CIB3 (ENSCAFG00845030374)	FAM32A (ENSCAFG00845030334)	AP1M1 (ENSCAFG00845030279)	KLF2 (ENSCAFG00845030239)	EPS15L1 (ENSCAFG00845030050)	CALR3 (ENSCAFG00845029913)	C19orf44 (ENSCAFG00845029896)	CHERP (ENSCAFG00845029857)	SLC35E1 (ENSCAFG00845029814)	MED26 (ENSCAFG00845029764)	TMEM38A (ENSCAFG00845029710)	NWD1 (ENSCAFG00845029689)	SIN3B (ENSCAFG00845029623)	F2RL3 (ENSCAFG00845029589) ##19	CPAMD8 (ENSCAFG00845029496)	ENSCAFG00845029446	HAUS8 (ENSCAFG00845029375)	MYO9B (ENSCAFG00845028939)	USE1 (ENSCAFG00845028769)	OCEL1 (ENSCAFG00845028718)	NR2F6 (ENSCAFG00845028696)	USHBP1 (ENSCAFG00845028607)	BABAM1 (ENSCAFG00845028530)	ENSCAFG00845028449	ABHD8 (ENSCAFG00845028391)	ANO8 (ENSCAFG00845028007)	GTPBP3 (ENSCAFG00845027819)	PLVAP (ENSCAFG00845027772)	CCDC194 (ENSCAFG00845027737)
Dingo	MODERN SPECIES	112	CIB3 (ENSCAFG00020009714)	ENSCAFG00020009726	AP1M1 (ENSCAFG00020009738)	KLF2 (ENSCAFG00020009744)	EPS15L1 (ENSCAFG00020009751)	ENSCAFG00020009859	ENSCAFG00020009884	C19orf44 (ENSCAFG00020009908)	CHERP (ENSCAFG00020009941)	ENSCAFG00020010269	MED26 (ENSCAFG00020010270)	ENSCAFG00020010274	TMEM38A (ENSCAFG00020010277)	NWD1 (ENSCAFG00020010280)	SIN3B (ENSCAFG00020010296)	F2RL3 (ENSCAFG00020010307) ##19	CPAMD8 (ENSCAFG00020010312)	ENSCAFG00020010340	HAUS8 (ENSCAFG00020010342)	MYO9B (ENSCAFG00020010355)	USE1 (ENSCAFG00020010388)	ENSCAFG00020010390	NR2F6 (ENSCAFG00020010392)	USHBP1 (ENSCAFG00020010394)	BABAM1 (ENSCAFG00020010401)	ANKLE1 (ENSCAFG00020010402)	ABHD8 (ENSCAFG00020010409)	MRPL34 (ENSCAFG00020010412)	DDA1 (ENSCAFG00020010413)	ANO8 (ENSCAFG00020010420)	GTPBP3 (ENSCAFG00020010423)
Red fox	MODERN SPECIES	5	ENSVVUG00000017179	CIB3 (ENSVVUG00000017174)	FAM32A (ENSVVUG00000017167)	AP1M1 (ENSVVUG00000017156)	ENSVVUG00000017150	ENSVVUG00000017148	EPS15L1 (ENSVVUG00000017079)	CALR3 (ENSVVUG00000016815)	CUNH19orf44 (ENSVVUG00000016796)	CHERP (ENSVVUG00000016546)	SLC35E1 (ENSVVUG00000016525)	MED26 (ENSVVUG00000016506)	TMEM38A (ENSVVUG00000016501)	NWD1 (ENSVVUG00000016498)	SIN3B (ENSVVUG00000016480)	ENSVVUG00000016472 ##19	ENSVVUG00000016421	HAUS8 (ENSVVUG00000016390)	MYO9B (ENSVVUG00000016277)	USE1 (ENSVVUG00000016217)	ENSVVUG00000016208	NR2F6 (ENSVVUG00000016204)	USHBP1 (ENSVVUG00000016180)	BABAM1 (ENSVVUG00000016169)	ANKLE1 (ENSVVUG00000016162)	MRPL34 (ENSVVUG00000016159)	ABHD8 (ENSVVUG00000016154)	ENSVVUG00000016146	ANO8 (ENSVVUG00000016134)	GTPBP3 (ENSVVUG00000016125)	PLVAP (ENSVVUG00000016116)
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT01040000240876.a	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851
leopard	MODERN SPECIES	68	HSH2D (ENSPPRG00000016653)	CIB3 (ENSPPRG00000014160)	FAM32A (ENSPPRG00000013338)	AP1M1 (ENSPPRG00000011710)	KLF2 (ENSPPRG00000010172)	EPS15L1 (ENSPPRG00000009628)	CALR3 (ENSPPRG00000003981)	C19orf44 (ENSPPRG00000003542)	CHERP (ENSPPRG00000003275)	SLC35E1 (ENSPPRG00000002839)	MED26 (ENSPPRG00000002137)	SMIM7 (ENSPPRG00000001938)	TMEM38A (ENSPPRG00000001060)	NWD1 (ENSPPRG00000000158)	SIN3B (ENSPPRG00000020039)	F2RL3 (ENSPPRG00000014972) ##19	ENSPPRG00000014772	ENSPPRG00000020051	HAUS8 (ENSPPRG00000013462)	MYO9B (ENSPPRG00000011490)	USE1 (ENSPPRG00000005292)	OCEL1 (ENSPPRG00000001849)	NR2F6 (ENSPPRG00000000990)	USHBP1 (ENSPPRG00000000237)	BABAM1 (ENSPPRG00000023343)	ANKLE1 (ENSPPRG00000018557)	ABHD8 (ENSPPRG00000015700)	MRPL34 (ENSPPRG00000015405)	ENSPPRG00000013674	GTPBP3 (ENSPPRG00000010547)	PLVAP (ENSPPRG00000008926)
Cat	MODERN SPECIES	1	CIB3 (ENSFCAG00000009003)	FAM32A (ENSFCAG00000028032)	AP1M1 (ENSFCAG00000009006)	KLF2 (ENSFCAG00000043468)	EPS15L1 (ENSFCAG00000013169)	CALR3 (ENSFCAG00000036928)	CA2H19orf44 (ENSFCAG00000013171)	ENSFCAG00000053594	CHERP (ENSFCAG00000013172)	SLC35E1 (ENSFCAG00000013173)	MED26 (ENSFCAG00000022360)	SMIM7 (ENSFCAG00000016411)	TMEM38A (ENSFCAG00000024691)	NWD1 (ENSFCAG00000013175)	SIN3B (ENSFCAG00000001576)	F2RL3 (ENSFCAG00000001577) ##19	CPAMD8 (ENSFCAG00000001578)	HAUS8 (ENSFCAG00000001579)	MYO9B (ENSFCAG00000000996)	USE1 (ENSFCAG00000000997)	OCEL1 (ENSFCAG00000000998)	NR2F6 (ENSFCAG00000000999)	USHBP1 (ENSFCAG00000001000)	BABAM1 (ENSFCAG00000044320)	ANKLE1 (ENSFCAG00000001003)	ABHD8 (ENSFCAG00000001005)	MRPL34 (ENSFCAG00000043549)	DDA1 (ENSFCAG00000001001)	ANO8 (ENSFCAG00000001006)	GTPBP3 (ENSFCAG00000001008)	PLVAP (ENSFCAG00000008511)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166
Greater horseshoe bat	MODERN SPECIES	9	HSH2D (ENSRFEG00010012382)	CIB3 (ENSRFEG00010012404)	FAM32A (ENSRFEG00010012542)	AP1M1 (ENSRFEG00010012672)	KLF2 (ENSRFEG00010012949)	EPS15L1 (ENSRFEG00010013076)	CALR3 (ENSRFEG00010013317)	C19orf44 (ENSRFEG00010013371)	CHERP (ENSRFEG00010013631)	SLC35E1 (ENSRFEG00010013756)	MED26 (ENSRFEG00010013794)	ENSRFEG00010013962	TMEM38A (ENSRFEG00010014024)	NWD1 (ENSRFEG00010014152)	SIN3B (ENSRFEG00010015034)	F2RL3 (ENSRFEG00010015293) ##19	ENSRFEG00010015376	HAUS8 (ENSRFEG00010015413)	MYO9B (ENSRFEG00010015456)	USE1 (ENSRFEG00010015583)	OCEL1 (ENSRFEG00010015689)	NR2F6 (ENSRFEG00010015937)	USHBP1 (ENSRFEG00010016025)	BABAM1 (ENSRFEG00010016215)	ANKLE1 (ENSRFEG00010016433)	ABHD8 (ENSRFEG00010016451)	ENSRFEG00010016500	DDA1 (ENSRFEG00010016565)	ANO8 (ENSRFEG00010016652)	GTPBP3 (ENSRFEG00010016703)	PLVAP (ENSRFEG00010016773)
Microbat	MODERN SPECIES	1217	RAB8A (ENSMLUG00000006982)	HSH2D (ENSMLUG00000016182)	CIB3 (ENSMLUG00000016192)	ENSMLUG00000000585	AP1M1 (ENSMLUG00000000588)	EPS15L1 (ENSMLUG00000000595)	CALR3 (ENSMLUG00000013868)	C19orf44 (ENSMLUG00000013874)	CHERP (ENSMLUG00000013881)	SLC35E1 (ENSMLUG00000013892)	ENSMLUG00000013896	SMIM7 (ENSMLUG00000030442)	TMEM38A (ENSMLUG00000013900)	NWD1 (ENSMLUG00000013904)	SIN3B (ENSMLUG00000013916)	F2RL3 (ENSMLUG00000013928) ##19	CPAMD8 (ENSMLUG00000014332)	HAUS8 (ENSMLUG00000014347)	MYO9B (ENSMLUG00000014356)	USE1 (ENSMLUG00000014373)	ENSMLUG00000014378	NR2F6 (ENSMLUG00000014386)	BABAM1 (ENSMLUG00000030550)	ANKLE1 (ENSMLUG00000029496)	ABHD8 (ENSMLUG00000003994)	ENSMLUG00000003993	DDA1 (ENSMLUG00000003990)	ANO8 (ENSMLUG00000010490)	GTPBP3 (ENSMLUG00000010529)
Megabat	MODERN SPECIES	3395						EPS15L1 (ENSPVAG00000004316)	CALR3 (ENSPVAG00000004318)	C19orf44 (ENSPVAG00000004319)	CHERP (ENSPVAG00000004320)	SLC35E1 (ENSPVAG00000004322)	MED26 (ENSPVAG00000004323)	SMIM7 (ENSPVAG00000004327)	TMEM38A (ENSPVAG00000004328)	NWD1 (ENSPVAG00000004329)	SIN3B (ENSPVAG00000004332)	F2RL3 (ENSPVAG00000004336) ##19	CPAMD8 (ENSPVAG00000004337)
Equus	ANCESTRAL SPECIES	23	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811.b	ENSGT00940000157924	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029.j	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00850000133633
Donkey	MODERN SPECIES		CIB3 (ENSEASG00005000199)	FAM32A (ENSEASG00005000261)	AP1M1 (ENSEASG00005025410)	ENSEASG00005034734	ENSEASG00005000307	EPS15L1 (ENSEASG00005000338)	CALR3 (ENSEASG00005000358)	C19orf44 (ENSEASG00005000419)	CHERP (ENSEASG00005000428)	SLC35E1 (ENSEASG00005000435)	MED26 (ENSEASG00005000460)	ENSEASG00005028845	TMEM38A (ENSEASG00005000479)	NWD1 (ENSEASG00005000508)	SIN3B (ENSEASG00005000531)	F2RL3 (ENSEASG00005000542) ##19	HAUS8 (ENSEASG00005000554)	MYO9B (ENSEASG00005000735)	USE1 (ENSEASG00005002838)	ENSEASG00005034295	NR2F6 (ENSEASG00005002847)	USHBP1 (ENSEASG00005002853)	BABAM1 (ENSEASG00005002859)	ANKLE1 (ENSEASG00005002868)	ENSEASG00005027125	ABHD8 (ENSEASG00005002873)	ENSEASG00005037977	ENSEASG00005029028	ANO8 (ENSEASG00005002893)	GTPBP3 (ENSEASG00005002907)	PLVAP (ENSEASG00005002913)
Horse	MODERN SPECIES	13	RAB8A (ENSECAG00000053880)	TPM4 (ENSECAG00000022254)	HSH2D (ENSECAG00000016757)	FAM32A (ENSECAG00000017554)	AP1M1 (ENSECAG00000019502)	KLF2 (ENSECAG00000036534)	EPS15L1 (ENSECAG00000019452)	C21H19orf44 (ENSECAG00000009448)	CHERP (ENSECAG00000012713)	SLC35E1 (ENSECAG00000007905)	MED26 (ENSECAG00000011280)	SMIM7 (ENSECAG00000026861)	TMEM38A (ENSECAG00000012297)	NWD1 (ENSECAG00000016197)	SIN3B (ENSECAG00000008366)	F2RL3 (ENSECAG00000003515) ##19	HAUS8 (ENSECAG00000005865)	MYO9B (ENSECAG00000010919)	USE1 (ENSECAG00000018536)	OCEL1 (ENSECAG00000010782)	NR2F6 (ENSECAG00000035932)	USHBP1 (ENSECAG00000012156)	BABAM1 (ENSECAG00000017099)	ANKLE1 (ENSECAG00000000781)	ABHD8 (ENSECAG00000009051)	MRPL34 (ENSECAG00000048026)	ANO8 (ENSECAG00000014273)	DDA1 (ENSECAG00000011742)	GTPBP3 (ENSECAG00000018651)	PLVAP (ENSECAG00000022390)	CCDC194 (ENSECAG00000042865)
Atlantogenata	ANCESTRAL SPECIES	42	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00390000013782
Afrotheria	ANCESTRAL SPECIES	45	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00390000013782
Afrotheria_a	ANCESTRAL SPECIES	44	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000162475	ENSGT00940000160748	ENSGT00530000063974.a	ENSGT00390000016934	ENSGT00510000049316	ENSGT00390000007336	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00390000006166	ENSGT00390000013782
Elephant	MODERN SPECIES	270	RAB8A (ENSLAFG00000004032)	ENSLAFG00000013758	CIB3 (ENSLAFG00000013757)	FAM32A (ENSLAFG00000009394)	AP1M1 (ENSLAFG00000009395)	EPS15L1 (ENSLAFG00000023188)	CALR3 (ENSLAFG00000009094)	C19orf44 (ENSLAFG00000009095)	CHERP (ENSLAFG00000009096)	SLC35E1 (ENSLAFG00000009099)	MED26 (ENSLAFG00000028973)	SMIM7 (ENSLAFG00000020956)	TMEM38A (ENSLAFG00000029101)	NWD1 (ENSLAFG00000007110)	SIN3B (ENSLAFG00000007273)	F2RL3 (ENSLAFG00000022505) ##19	HAUS8 (ENSLAFG00000017547)	MYO9B (ENSLAFG00000007351)	USE1 (ENSLAFG00000007366)	OCEL1 (ENSLAFG00000022373)	NR2F6 (ENSLAFG00000007367)	USHBP1 (ENSLAFG00000014079)	BABAM1 (ENSLAFG00000026019)	ANKLE1 (ENSLAFG00000012247)	ABHD8 (ENSLAFG00000012252)	MRPL34 (ENSLAFG00000012255)	DDA1 (ENSLAFG00000030569)	ANO8 (ENSLAFG00000030710)	GTPBP3 (ENSLAFG00000013978)	PLVAP (ENSLAFG00000026924)	ENSLAFG00000031751
Hyrax	MODERN SPECIES	9767																F2RL3 (ENSPCAG00000004542) ##19
Xenarthra	ANCESTRAL SPECIES																	ENSGT01050000244840.A.b.a ##19
Armadillo	MODERN SPECIES	4002																F2RL3 (ENSDNOG00000049664) ##19	ENSDNOG00000038752
Platypus	MODERN SPECIES	84	CIB3 (ENSOANG00000012801)	FAM32A (ENSOANG00000037684)	AP1M1 (ENSOANG00000042206)	KLF2 (ENSOANG00000014443)	EPS15L1 (ENSOANG00000003714)	ENSOANG00000049384	ENSOANG00000007244	CHERP (ENSOANG00000045953)	SLC35E1 (ENSOANG00000042325)	ENSOANG00000013449	SMIM7 (ENSOANG00000047213)	TMEM38A (ENSOANG00000007866)	ENSOANG00000007867	NWD1 (ENSOANG00000007868)	SIN3B (ENSOANG00000013064)	ENSOANG00000013065 ##19	CPAMD8 (ENSOANG00000013066)	ENSOANG00000019897	MYO9B (ENSOANG00000008686)	USE1 (ENSOANG00000049806)	INSR (ENSOANG00000002002)	ENSOANG00000047277	ARHGEF18 (ENSOANG00000009603)	ENSOANG00000005191	PEX11G (ENSOANG00000013450)	ENSOANG00000004760	ARRDC2 (ENSOANG00000013069)	ENSOANG00000001288	MAST3 (ENSOANG00000001293)	PIK3R2 (ENSOANG00000001300)	ENSOANG00000001305
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Chinese turtle	MODERN SPECIES	1045			CIB3 (ENSPSIG00000016390)	AP1M1 (ENSPSIG00000015763)	ENSPSIG00000015757	EPS15L1 (ENSPSIG00000014047)	CALR3 (ENSPSIG00000013549)	C19orf44 (ENSPSIG00000013423)	CHERP (ENSPSIG00000011974)	SLC35E1 (ENSPSIG00000011843)	MED26 (ENSPSIG00000011647)	TMEM38A (ENSPSIG00000011588)	ENSPSIG00000010977	NWD1 (ENSPSIG00000010426)	SIN3B (ENSPSIG00000008402)	F2RL3 (ENSPSIG00000008320) ##19	CPAMD8 (ENSPSIG00000007510)	ENSPSIG00000007045	ELAVL1 (ENSPSIG00000013736)
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	771	AP1M1 (ENSCPBG00000015037)	TPM4 (ENSCPBG00000015030)	RAB8A (ENSCPBG00000015027)	CIB3 (ENSCPBG00000015022)	ENSCPBG00000015018	EPS15L1 (ENSCPBG00000015007)	CALR3 (ENSCPBG00000014982)	C19orf44 (ENSCPBG00000014974)	CHERP (ENSCPBG00000014970)	SLC35E1 (ENSCPBG00000014966)	MED26 (ENSCPBG00000014964)	SMIM7 (ENSCPBG00000014961)	TMEM38A (ENSCPBG00000014959)	NWD1 (ENSCPBG00000014938)	SIN3B (ENSCPBG00000014932)	F2RL3 (ENSCPBG00000014930) ##19	CPAMD8 (ENSCPBG00000014917)	HAUS8 (ENSCPBG00000014909)	MYO9B (ENSCPBG00000014216)	USE1 (ENSCPBG00000014174)	INSR (ENSCPBG00000013065)	ARHGEF18 (ENSCPBG00000012967)	ENSCPBG00000012964	ENSCPBG00000012961	ARRDC2 (ENSCPBG00000012959)	ENSCPBG00000012956	MAST3 (ENSCPBG00000012946)	PIK3R2 (ENSCPBG00000012939)	IFI30 (ENSCPBG00000012937)	MPV17L2 (ENSCPBG00000012933)	RAB3A (ENSCPBG00000012930)
painted turtle	MODERN SPECIES	739	ENSCPBG00000007870	ENSCPBG00000007874	ENSCPBG00000007879	ENSCPBG00000007888	ENSCPBG00000007900	ENSCPBG00000008043	PCDHGC5 (ENSCPBG00000008057)	ENSCPBG00000008073	ENSCPBG00000008080	ENSCPBG00000008082	ENSCPBG00000008084	DIAPH1 (ENSCPBG00000008131)	HDAC3 (ENSCPBG00000008391)	RELL2 (ENSCPBG00000008403)	FCHSD1 (ENSCPBG00000008411)	ENSCPBG00000008418 ##19	ENSCPBG00000008422	ARAP3 (ENSCPBG00000008435)	ENSCPBG00000008467	ENSCPBG00000008475	DELE1 (ENSCPBG00000008481)	PCDH12 (ENSCPBG00000008490)	RGS5 (ENSCPBG00000008497)	RGS4 (ENSCPBG00000008501)	ENSCPBG00000008507
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	92	RAB8A (ENSTMTG00000005187)	CIB3 (ENSTMTG00000005210)	FAM32A (ENSTMTG00000005230)	AP1M1 (ENSTMTG00000005242)	ENSTMTG00000005277	EPS15L1 (ENSTMTG00000005574)	CALR3 (ENSTMTG00000010255)	ENSTMTG00000010292	CHERP (ENSTMTG00000010306)	SLC35E1 (ENSTMTG00000010322)	MED26 (ENSTMTG00000010343)	TMEM38A (ENSTMTG00000010365)	ENSTMTG00000010464	NWD1 (ENSTMTG00000010502)	SIN3B (ENSTMTG00000010646)	F2RL3 (ENSTMTG00000010698) ##19	CPAMD8 (ENSTMTG00000010720)	HAUS8 (ENSTMTG00000010855)	MYO9B (ENSTMTG00000010895)	USE1 (ENSTMTG00000011087)	INSR (ENSTMTG00000011119)	ENSTMTG00000011196	ARHGEF18 (ENSTMTG00000011217)	ENSTMTG00000011265	PEX11G (ENSTMTG00000011272)	ARRDC2 (ENSTMTG00000011291)	MAST3 (ENSTMTG00000011391)	PIK3R2 (ENSTMTG00000012134)	IFI30 (ENSTMTG00000012174)	MPV17L2 (ENSTMTG00000012198)	RAB3A (ENSTMTG00000012226)
Three-toed box turtle	MODERN SPECIES	751																ENSTMTG00000011304 ##19
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	14	RAB8A (ENSGEVG00005014211)	CIB3 (ENSGEVG00005014229)	FAM32A (ENSGEVG00005014273)	AP1M1 (ENSGEVG00005014343)	ENSGEVG00005014693	EPS15L1 (ENSGEVG00005015080)	CALR3 (ENSGEVG00005016752)	C19orf44 (ENSGEVG00005016875)	CHERP (ENSGEVG00005016897)	SLC35E1 (ENSGEVG00005016933)	MED26 (ENSGEVG00005016975)	SMIM7 (ENSGEVG00005016994)	TMEM38A (ENSGEVG00005017010)	NWD1 (ENSGEVG00005017068)	SIN3B (ENSGEVG00005017238)	F2RL3 (ENSGEVG00005017263) ##19	CPAMD8 (ENSGEVG00005017342)	MYO9B (ENSGEVG00005017707)	USE1 (ENSGEVG00005018461)	INSR (ENSGEVG00005018487)	ARHGEF18 (ENSGEVG00005018537)	ENSGEVG00005018609	PEX11G (ENSGEVG00005018620)	ARRDC2 (ENSGEVG00005018645)	ENSGEVG00005018680	MAST3 (ENSGEVG00005018711)	PIK3R2 (ENSGEVG00005018788)	IFI30 (ENSGEVG00005018820)	MPV17L2 (ENSGEVG00005018840)	ENSGEVG00005018855	RAB3A (ENSGEVG00005018864)
Goode s thornscrub tortoise	MODERN SPECIES	22	ENSGEVG00005018263	ENSGEVG00005018283	ENSGEVG00005018303	ENSGEVG00005018324	ENSGEVG00005018354	ENSGEVG00005018392	ENSGEVG00005018479	PCDHGC3 (ENSGEVG00005018579)	ENSGEVG00005018599	PCDHGC5 (ENSGEVG00005018617)	ENSGEVG00005018631	ENSGEVG00005018660	HDAC3 (ENSGEVG00005018950)	ENSGEVG00005018972	FCHSD1 (ENSGEVG00005018993)	ENSGEVG00005019034 ##19	ARAP3 (ENSGEVG00005019106)	ENSGEVG00005019327	ENSGEVG00005019351	ENSGEVG00005019357	ENSGEVG00005019378	DELE1 (ENSGEVG00005004039)	ENSGEVG00005004123	ENSGEVG00005004131	PCDH12 (ENSGEVG00005004148)	ENSGEVG00005004184	RGS5 (ENSGEVG00005004212)	RGS4 (ENSGEVG00005004231)	SELP (ENSGEVG00005004306)	ATF6 (ENSGEVG00005004476)	OLFML2B (ENSGEVG00005004519)
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	897														NWD1 (ENSCABG00000018369)	SIN3B (ENSCABG00000018314)	F2RL3 (ENSCABG00000018311) ##19	ENSCABG00000018307	HAUS8 (ENSCABG00000018304)	MYO9B (ENSCABG00000016450)	USE1 (ENSCABG00000016422)	INSR (ENSCABG00000016421)	ARHGEF18 (ENSCABG00000016420)	ENSCABG00000016419	PEX11G (ENSCABG00000016417)	TEX45 (ENSCABG00000016416)	ARRDC2 (ENSCABG00000016415)	MAST3 (ENSCABG00000016409)	PIK3R2 (ENSCABG00000016368)	IFI30 (ENSCABG00000016346)	MPV17L2 (ENSCABG00000016336)	RAB3A (ENSCABG00000016331)
Abingdon island giant tortoise	MODERN SPECIES	321														ENSCABG00000018643	FCHSD1 (ENSCABG00000018645)	ENSCABG00000018648 ##19	ARAP3 (ENSCABG00000018653)	ENSCABG00000018666
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Aves	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	180	ENSSCUG00000001883	RAB8A (ENSSCUG00000001886)	CIB3 (ENSSCUG00000001888)	AP1M1 (ENSSCUG00000001891)	ENSSCUG00000001893	EPS15L1 (ENSSCUG00000001905)	CALR3 (ENSSCUG00000001962)	ENSSCUG00000001965	CHERP (ENSSCUG00000001967)	SLC35E1 (ENSSCUG00000001971)	MED26 (ENSSCUG00000001974)	SMIM7 (ENSSCUG00000001978)	TMEM38A (ENSSCUG00000001980)	NWD1 (ENSSCUG00000001988)	SIN3B (ENSSCUG00000002001)	F2RL3 (ENSSCUG00000002004) ##19	ENSSCUG00000002005	HAUS8 (ENSSCUG00000002008)	MYO9B (ENSSCUG00000002014)	USE1 (ENSSCUG00000002029)	INSR (ENSSCUG00000002032)	ARHGEF18 (ENSSCUG00000002036)	ENSSCUG00000002046	ENSSCUG00000002047	ARRDC2 (ENSSCUG00000002052)
African ostrich	MODERN SPECIES	257								PCDHGC3 (ENSSCUG00000004250)	ENSSCUG00000004251	ENSSCUG00000004253	ENSSCUG00000004255	DIAPH1 (ENSSCUG00000004278)	HDAC3 (ENSSCUG00000004318)	RELL2 (ENSSCUG00000004321)	FCHSD1 (ENSSCUG00000004324)	ENSSCUG00000004332 ##19	ARAP3 (ENSSCUG00000004334)	ENSSCUG00000004339	PCDH1 (ENSSCUG00000004343)	DELE1 (ENSSCUG00000004349)	PCDH12 (ENSSCUG00000004351)	ECSCR (ENSSCUG00000004352)	DNAJC18 (ENSSCUG00000004353)	ENSSCUG00000004354	SLC23A1 (ENSSCUG00000004355)	PAIP2 (ENSSCUG00000004356)	MATR3 (ENSSCUG00000004357)	SIL1 (ENSSCUG00000004362)	CTNNA1 (ENSSCUG00000004363)	LRRTM2 (ENSSCUG00000004364)	HSPA9 (ENSSCUG00000004385)
Neognathae	ANCESTRAL SPECIES	21	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492
Golden eagle	MODERN SPECIES	3	RAB8A (ENSACCG00020012160)	CIB3 (ENSACCG00020012134)	FAM32A (ENSACCG00020012083)	AP1M1 (ENSACCG00020012076)	ENSACCG00020012058	EPS15L1 (ENSACCG00020011983)	CALR3 (ENSACCG00020011798)	C19orf44 (ENSACCG00020011769)	CHERP (ENSACCG00020011736)	SLC35E1 (ENSACCG00020011685)	MED26 (ENSACCG00020011662)	SMIM7 (ENSACCG00020011633)	TMEM38A (ENSACCG00020011612)	ENSACCG00020011593	SIN3B (ENSACCG00020011471)	F2RL3 (ENSACCG00020011442) ##19	CPAMD8 (ENSACCG00020007102)	HAUS8 (ENSACCG00020007063)	MYO9B (ENSACCG00020006996)	USE1 (ENSACCG00020006959)	INSR (ENSACCG00020006932)	ENSACCG00020006918	ARHGEF18 (ENSACCG00020006875)	ENSACCG00020006793	ARRDC2 (ENSACCG00020006771)	MAST3 (ENSACCG00020006703)	PIK3R2 (ENSACCG00020006658)	IFI30 (ENSACCG00020006634)	MPV17L2 (ENSACCG00020006616)	RAB3A (ENSACCG00020006602)	ENSACCG00020006565
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	13	RAB8A (ENSSHBG00005018586)	CIB3 (ENSSHBG00005018583)	FAM32A (ENSSHBG00005018578)	AP1M1 (ENSSHBG00005018575)	ENSSHBG00005018572	EPS15L1 (ENSSHBG00005018556)	CALR3 (ENSSHBG00005018541)	C19orf44 (ENSSHBG00005018538)	CHERP (ENSSHBG00005018536)	SLC35E1 (ENSSHBG00005018530)	MED26 (ENSSHBG00005018529)	TMEM38A (ENSSHBG00005018528)	ENSSHBG00005018526	SMIM7 (ENSSHBG00005018524)	SIN3B (ENSSHBG00005018521)	F2RL3 (ENSSHBG00005018516) ##19	CPAMD8 (ENSSHBG00005018501)	HAUS8 (ENSSHBG00005018488)	MYO9B (ENSSHBG00005017297)	USE1 (ENSSHBG00005017255)	ENSSHBG00005017251	ENSSHBG00005017248	LSM7 (ENSSHBG00005017245)	SPPL2B (ENSSHBG00005017241)	ENSSHBG00005017183	ENSSHBG00005017173	ENSSHBG00005017170	TIMM13 (ENSSHBG00005017163)	LMNB2 (ENSSHBG00005017159)	HNRNPM (ENSSHBG00005017146)	TIMM44 (ENSSHBG00005017134)
Kakapo	MODERN SPECIES	6	ENSSHBG00005012241	ENSSHBG00005012284	PCDHGC4 (ENSSHBG00005012333)	ENSSHBG00005012370	ENSSHBG00005012382	ENSSHBG00005012432	ENSSHBG00005012445	ENSSHBG00005012478	ENSSHBG00005012504	ENSSHBG00005012530	ENSSHBG00005012546	PCDHGC5 (ENSSHBG00005012559)	HDAC3 (ENSSHBG00005012573)	RELL2 (ENSSHBG00005012600)	FCHSD1 (ENSSHBG00005012625)	ENSSHBG00005012649 ##19	ENSSHBG00005012666	ENSSHBG00005012717	ENSSHBG00005012795	PCDH1 (ENSSHBG00005013320)	DELE1 (ENSSHBG00005013335)	PCDH12 (ENSSHBG00005013344)	ENSSHBG00005013356	ECSCR (ENSSHBG00005013367)	DNAJC18 (ENSSHBG00005013376)	ENSSHBG00005013389	ENSSHBG00005013475	SLC23A1 (ENSSHBG00005013488)	PAIP2 (ENSSHBG00005013514)	ENSSHBG00005013527	MATR3 (ENSSHBG00005013551)
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	21	GNA11 (ENSTGUG00000000541)	ENSTGUG00000018462	ENSTGUG00000000525	S1PR4 (ENSTGUG00000029330)	NCLN (ENSTGUG00000000519)	ENSTGUG00000000514	HSD11B1L (ENSTGUG00000000510)	MICOS13 (ENSTGUG00000000509)	ENSTGUG00000000502	ENSTGUG00000000489	SLC35E1 (ENSTGUG00000021589)	MED26 (ENSTGUG00000025288)	ENSTGUG00000000482	TMEM38A (ENSTGUG00000000480)	SIN3B (ENSTGUG00000000474)	F2RL3 (ENSTGUG00000000473) ##19	CPAMD8 (ENSTGUG00000000470)	HAUS8 (ENSTGUG00000000469)	MYO9B (ENSTGUG00000000453)	USE1 (ENSTGUG00000000443)	INSR (ENSTGUG00000000426)	ARHGEF18 (ENSTGUG00000000416)	ENSTGUG00000000415	PEX11G (ENSTGUG00000026140)	ARRDC2 (ENSTGUG00000000411)	ENSTGUG00000026934	MAST3 (ENSTGUG00000000403)	PIK3R2 (ENSTGUG00000000392)	IFI30 (ENSTGUG00000000388)	RFX2 (ENSTGUG00000000369)	ACSBG2 (ENSTGUG00000000363)
Zebra finch	MODERN SPECIES	4	ENSTGUG00000026948	ENSTGUG00000018535	ENSTGUG00000019748	ENSTGUG00000020402	ENSTGUG00000019536	ENSTGUG00000020482	ENSTGUG00000027988	ENSTGUG00000028562	ENSTGUG00000022046	ENSTGUG00000023742	ENSTGUG00000026857	ENSTGUG00000001702	HDAC3 (ENSTGUG00000015013)	RELL2 (ENSTGUG00000025939)	FCHSD1 (ENSTGUG00000015068)	ENSTGUG00000015072 ##19	ARAP3 (ENSTGUG00000015074)	ENSTGUG00000027381	PDLIM4 (ENSTGUG00000001365)	ENSTGUG00000001369	P4HA2 (ENSTGUG00000001347)	ENSTGUG00000001346	ENSTGUG00000001326	ENSTGUG00000001321	FNIP1 (ENSTGUG00000001315)	RAPGEF6 (ENSTGUG00000001310)	ENSTGUG00000020111	FSTL4 (ENSTGUG00000001305)	C5orf15 (ENSTGUG00000001302)	VDAC1 (ENSTGUG00000001300)	TCF7 (ENSTGUG00000001295)
Common canary	DUPLICATION
Common canary	MODERN SPECIES	44	ENSSCAG00000005529	S1PR4 (ENSSCAG00000005525)	NCLN (ENSSCAG00000005389)	CELF5 (ENSSCAG00000005358)	ENSSCAG00000005353	ENSSCAG00000005350	ENSSCAG00000005346	ENSSCAG00000004187	ENSSCAG00000003995	ENSSCAG00000003979	SLC35E1 (ENSSCAG00000003963)	MED26 (ENSSCAG00000003956)	SMIM7 (ENSSCAG00000003955)	TMEM38A (ENSSCAG00000003949)	SIN3B (ENSSCAG00000003943)	F2RL3 (ENSSCAG00000003938) ##19	CPAMD8 (ENSSCAG00000003920)	HAUS8 (ENSSCAG00000003910)	MYO9B (ENSSCAG00000003623)	USE1 (ENSSCAG00000003564)	INSR (ENSSCAG00000003553)	ENSSCAG00000003545	ARHGEF18 (ENSSCAG00000003534)	ENSSCAG00000003532	PEX11G (ENSSCAG00000003522)	ARRDC2 (ENSSCAG00000003515)	MAST3 (ENSSCAG00000002920)	PIK3R2 (ENSSCAG00000002784)	IFI30 (ENSSCAG00000002724)	ENSSCAG00000002698	RFX2 (ENSSCAG00000002695)
Common canary	MODERN SPECIES	16	ENSSCAG00000008631	ENSSCAG00000008628	ENSSCAG00000008624	ENSSCAG00000008620	ENSSCAG00000008619	ENSSCAG00000008614	ENSSCAG00000008608	ENSSCAG00000008605	ENSSCAG00000008602	ENSSCAG00000008600	PCDHGC3 (ENSSCAG00000008596)	PCDHGC4 (ENSSCAG00000008589)	HDAC3 (ENSSCAG00000008583)	RELL2 (ENSSCAG00000008578)	FCHSD1 (ENSSCAG00000008572)	ENSSCAG00000008567 ##19	ARAP3 (ENSSCAG00000008406)	ENSSCAG00000008346	PCDH1 (ENSSCAG00000008340)	ENSSCAG00000008334	ENSSCAG00000008332	ENSSCAG00000008326	ENSSCAG00000008320	ENSSCAG00000008314	ENSSCAG00000008299
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	194	GNA11 (ENSGFOG00000006146)	ENSGFOG00000006115	S1PR4 (ENSGFOG00000006094)	NCLN (ENSGFOG00000006078)	ENSGFOG00000006073	CELF5 (ENSGFOG00000006068)	HSD11B1L (ENSGFOG00000006061)	MICOS13 (ENSGFOG00000006055)	ENSGFOG00000006037	ENSGFOG00000006021	SLC35E1 (ENSGFOG00000006003)	MED26 (ENSGFOG00000005994)	SMIM7 (ENSGFOG00000005990)	TMEM38A (ENSGFOG00000005982)	SIN3B (ENSGFOG00000005962)	F2RL3 (ENSGFOG00000005953) ##19	CPAMD8 (ENSGFOG00000005875)
Medium ground finch	MODERN SPECIES	234													HDAC3 (ENSGFOG00000006459)	RELL2 (ENSGFOG00000006453)	FCHSD1 (ENSGFOG00000006213)	ENSGFOG00000006175 ##19	ARAP3 (ENSGFOG00000006004)	ENSGFOG00000005979	PCDH1 (ENSGFOG00000005967)	DELE1 (ENSGFOG00000005960)	PCDH12 (ENSGFOG00000005938)	ENSGFOG00000005936	ECSCR (ENSGFOG00000005924)	DNAJC18 (ENSGFOG00000005914)	PAIP2 (ENSGFOG00000005909)	MATR3 (ENSGFOG00000005894)
Flycatcher	DUPLICATION
Flycatcher	MODERN SPECIES	20	ENSFALG00000026809	ENSFALG00000013891	ENSFALG00000013890	S1PR4 (ENSFALG00000013889)	NCLN (ENSFALG00000013887)	CELF5 (ENSFALG00000013886)	ENSFALG00000013885	ENSFALG00000027254	ENSFALG00000013882	ENSFALG00000013881	SLC35E1 (ENSFALG00000023928)	MED26 (ENSFALG00000013876)	ENSFALG00000028164	TMEM38A (ENSFALG00000013872)	SIN3B (ENSFALG00000013869)	F2RL3 (ENSFALG00000013868) ##19	CPAMD8 (ENSFALG00000013860)	HAUS8 (ENSFALG00000013857)	MYO9B (ENSFALG00000013855)	USE1 (ENSFALG00000026213)	ENSFALG00000013853	ENSFALG00000026675	ENSFALG00000013852	ENSFALG00000013850	ENSFALG00000023440	ARRDC2 (ENSFALG00000013849)	MAST3 (ENSFALG00000013842)	PIK3R2 (ENSFALG00000013839)	IFI30 (ENSFALG00000013837)	ENSFALG00000013834	ENSFALG00000026674
Flycatcher	MODERN SPECIES	4	ENSFALG00000014138	ENSFALG00000013458	RAD50 (ENSFALG00000013456)	ENSFALG00000025112	IRF1 (ENSFALG00000028567)	ENSFALG00000014137	ENSFALG00000023998	ENSFALG00000028868	PCDHGC4 (ENSFALG00000002847)	ENSFALG00000015011	ENSFALG00000002835	PCDHGC5 (ENSFALG00000023289)	HDAC3 (ENSFALG00000002877)	RELL2 (ENSFALG00000002888)	FCHSD1 (ENSFALG00000002891)	ENSFALG00000028840 ##19	ARAP3 (ENSFALG00000002912)	ENSFALG00000002941	ENSFALG00000028413	ENSFALG00000026492	ENSFALG00000002948	DELE1 (ENSFALG00000002953)	ENSFALG00000002957	ENSFALG00000026369	DNAJC18 (ENSFALG00000026251)	ENSFALG00000002984	SLC23A1 (ENSFALG00000003008)	PAIP2 (ENSFALG00000027530)	MATR3 (ENSFALG00000003071)	SIL1 (ENSFALG00000003094)	CTNNA1 (ENSFALG00000003106)
Great tit	DUPLICATION
Great tit	MODERN SPECIES	21	GNA11 (ENSPMJG00000010893)	ENSPMJG00000010892	ENSPMJG00000010891	S1PR4 (ENSPMJG00000010890)	NCLN (ENSPMJG00000010889)	CELF5 (ENSPMJG00000010888)	ENSPMJG00000010887	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010874	ENSPMJG00000010873	SLC35E1 (ENSPMJG00000010872)	MED26 (ENSPMJG00000010871)	SMIM7 (ENSPMJG00000010869)	TMEM38A (ENSPMJG00000010867)	SIN3B (ENSPMJG00000010861)	F2RL3 (ENSPMJG00000010859) ##19	CPAMD8 (ENSPMJG00000010852)	HAUS8 (ENSPMJG00000010850)	MYO9B (ENSPMJG00000010846)	USE1 (ENSPMJG00000010845)	INSR (ENSPMJG00000010844)	ENSPMJG00000010842	ARHGEF18 (ENSPMJG00000010837)	ENSPMJG00000010836	PEX11G (ENSPMJG00000010835)	ARRDC2 (ENSPMJG00000010834)	ENSPMJG00000010833	MAST3 (ENSPMJG00000010830)	PIK3R2 (ENSPMJG00000010829)	IFI30 (ENSPMJG00000010828)	RFX2 (ENSPMJG00000010657)
Great tit	MODERN SPECIES	4	SLC4A9 (ENSPMJG00000000108)	ENSPMJG00000000384	ANKHD1 (ENSPMJG00000000454)	SRA1 (ENSPMJG00000007965)	APBB3 (ENSPMJG00000007966)	ENSPMJG00000007968	ZMAT2 (ENSPMJG00000007974)	ENSPMJG00000007975	ENSPMJG00000007976	ENSPMJG00000008015	ENSPMJG00000008018	PCDHGC5 (ENSPMJG00000008025)	HDAC3 (ENSPMJG00000008036)	RELL2 (ENSPMJG00000008040)	FCHSD1 (ENSPMJG00000008043)	ENSPMJG00000008052 ##19	ARAP3 (ENSPMJG00000008055)	ENSPMJG00000008060	ENSPMJG00000008061	ENSPMJG00000008062	PCDH1 (ENSPMJG00000008064)	ENSPMJG00000008086	PCDH12 (ENSPMJG00000008087)	ENSPMJG00000008088	ECSCR (ENSPMJG00000008089)	PAIP2 (ENSPMJG00000008090)	DNAJC18 (ENSPMJG00000008091)	ENSPMJG00000008092	ENSPMJG00000008095	SLC23A1 (ENSPMJG00000008097)	MATR3 (ENSPMJG00000008098)
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Anatidae	ANCESTRAL SPECIES	62	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Pink-footed goose	DUPLICATION
Pink-footed goose	MODERN SPECIES	221	RAB8A (ENSABRG00000015512)	CIB3 (ENSABRG00000015507)	FAM32A (ENSABRG00000015504)	AP1M1 (ENSABRG00000015258)	ENSABRG00000015228	EPS15L1 (ENSABRG00000012667)	CALR3 (ENSABRG00000012473)	ENSABRG00000012464	CHERP (ENSABRG00000012412)	SLC35E1 (ENSABRG00000012348)	MED26 (ENSABRG00000012342)	SMIM7 (ENSABRG00000012337)	TMEM38A (ENSABRG00000012328)	NWD1 (ENSABRG00000012111)	SIN3B (ENSABRG00000012013)	F2RL3 (ENSABRG00000011995) ##19	ENSABRG00000011963	ENSABRG00000011941	MYO9B (ENSABRG00000008759)	ENSABRG00000008482	ENSABRG00000008470	INSR (ENSABRG00000004285)	ARHGEF18 (ENSABRG00000003820)	ENSABRG00000003818	PEX11G (ENSABRG00000003816)	ARRDC2 (ENSABRG00000003384)	MAST3 (ENSABRG00000001985)	PIK3R2 (ENSABRG00000001767)	IFI30 (ENSABRG00000001719)	MPV17L2 (ENSABRG00000001672)	ENSABRG00000001610
Pink-footed goose	MODERN SPECIES	51							ENSABRG00000000418	ENSABRG00000000392	ENSABRG00000000381	ENSABRG00000000374	PCDHGC5 (ENSABRG00000000356)	PCDHGC3 (ENSABRG00000021785)	HDAC3 (ENSABRG00000021775)	RELL2 (ENSABRG00000021772)	FCHSD1 (ENSABRG00000021767)	ENSABRG00000021763 ##19	ARAP3 (ENSABRG00000021640)	ENSABRG00000021622	ENSABRG00000021618	PCDH1 (ENSABRG00000021614)	DELE1 (ENSABRG00000021601)	PCDH12 (ENSABRG00000021599)	ENSABRG00000021592	DNAJC18 (ENSABRG00000021586)	MZB1 (ENSABRG00000021581)	SLC23A1 (ENSABRG00000021513)	PAIP2 (ENSABRG00000021499)	MATR3 (ENSABRG00000021495)	SIL1 (ENSABRG00000021487)	LRRTM2 (ENSABRG00000021479)	ENSABRG00000021475
Duck	DUPLICATION
Duck	MODERN SPECIES	20	ENSAPLG00000020730	TPM4 (ENSAPLG00000027602)	RAB8A (ENSAPLG00000008784)	CIB3 (ENSAPLG00000008953)	FAM32A (ENSAPLG00000009058)	AP1M1 (ENSAPLG00000009067)	ENSAPLG00000009602	EPS15L1 (ENSAPLG00000009655)	CALR3 (ENSAPLG00000010728)	C19orf44 (ENSAPLG00000010741)	CHERP (ENSAPLG00000010773)	SLC35E1 (ENSAPLG00000011233)	MED26 (ENSAPLG00000011240)	TMEM38A (ENSAPLG00000024207)	SIN3B (ENSAPLG00000011724)	F2RL3 (ENSAPLG00000012122) ##19	ENSAPLG00000012206	HAUS8 (ENSAPLG00000012957)	MYO9B (ENSAPLG00000013123)	ENSAPLG00000021258	ENSAPLG00000025695	INSR (ENSAPLG00000014259)	ARHGEF18 (ENSAPLG00000015732)	ENSAPLG00000001869	PGPEP1 (ENSAPLG00000007370)	ELL (ENSAPLG00000006360)	KLHL26 (ENSAPLG00000011078)	CRTC1 (ENSAPLG00000010657)	ENSAPLG00000009709	UPF1 (ENSAPLG00000009175)	ENSAPLG00000009148
Duck	MODERN SPECIES	5	ENSAPLG00000023692	PCDHAC2 (ENSAPLG00000003839)	PCDHAC1 (ENSAPLG00000029593)	ENSAPLG00000021486	ENSAPLG00000027449	ENSAPLG00000004083	PCDHB3 (ENSAPLG00000029860)	PCDHGC5 (ENSAPLG00000020916)	ENSAPLG00000019666	ENSAPLG00000020510	ENSAPLG00000004903	ENSAPLG00000005060	RELL2 (ENSAPLG00000005508)	ENSAPLG00000005657	ENSAPLG00000030057	ENSAPLG00000001544 ##19	ARAP3 (ENSAPLG00000005934)	ENSAPLG00000006514	PCDH1 (ENSAPLG00000007472)	DELE1 (ENSAPLG00000007579)	PCDH12 (ENSAPLG00000007583)	ENSAPLG00000029121	ENSAPLG00000017467	ENSAPLG00000030244	SLC23A1 (ENSAPLG00000008074)	PAIP2 (ENSAPLG00000019131)	MATR3 (ENSAPLG00000008118)	SIL1 (ENSAPLG00000008556)	LRRTM2 (ENSAPLG00000000895)	CTNNA1 (ENSAPLG00000008629)	HSPA9 (ENSAPLG00000009263)
Phasianidae	ANCESTRAL SPECIES	19	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Japanese quail	DUPLICATION
Japanese quail	MODERN SPECIES	20	TPM4 (ENSCJPG00005015429)	RAB8A (ENSCJPG00005015428)	CIB3 (ENSCJPG00005015427)	FAM32A (ENSCJPG00005015426)	AP1M1 (ENSCJPG00005015181)	ENSCJPG00005015176	EPS15L1 (ENSCJPG00005013902)	CALR3 (ENSCJPG00005013885)	C19orf44 (ENSCJPG00005013884)	CHERP (ENSCJPG00005013883)	SLC35E1 (ENSCJPG00005013880)	MED26 (ENSCJPG00005013873)	SMIM7 (ENSCJPG00005013871)	TMEM38A (ENSCJPG00005013869)	SIN3B (ENSCJPG00005013686)	F2RL3 (ENSCJPG00005013685) ##19	ENSCJPG00005013684	MYO9B (ENSCJPG00005013273)	ENSCJPG00005013269	ENSCJPG00005013268	INSR (ENSCJPG00005011939)	ARHGEF18 (ENSCJPG00005011932)	ENSCJPG00005011931	ENSCJPG00005011930	ARRDC2 (ENSCJPG00005011929)	ENSCJPG00005011928	MAST3 (ENSCJPG00005011912)	PIK3R2 (ENSCJPG00005011909)	IFI30 (ENSCJPG00005011906)	MPV17L2 (ENSCJPG00005011905)	RAB3A (ENSCJPG00005011904)
Japanese quail	MODERN SPECIES	4	ENSCJPG00005011505	ENSCJPG00005011499	PCDHAC2 (ENSCJPG00005011498)	ENSCJPG00005011486	ENSCJPG00005011485	ENSCJPG00005011438	ENSCJPG00005011437	ENSCJPG00005011436	PCDHGC3 (ENSCJPG00005011431)	ENSCJPG00005011428	ENSCJPG00005011427	ENSCJPG00005011426	HDAC3 (ENSCJPG00005011425)	RELL2 (ENSCJPG00005011424)	FCHSD1 (ENSCJPG00005011422)	ENSCJPG00005011421 ##19	ARAP3 (ENSCJPG00005011410)	ENSCJPG00005011409	PCDH1 (ENSCJPG00005011406)	DELE1 (ENSCJPG00005011400)	ENSCJPG00005011399	PCDH12 (ENSCJPG00005011398)	ENSCJPG00005011397	ECSCR (ENSCJPG00005011396)	DNAJC18 (ENSCJPG00005011393)	ENSCJPG00005011391	PAIP2 (ENSCJPG00005011388)	MATR3 (ENSCJPG00005011385)	SIL1 (ENSCJPG00005011384)	LRRTM2 (ENSCJPG00005011383)	CTNNA1 (ENSCJPG00005011382)
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b.f	ENSGT00940000164492
Chicken	DUPLICATION
Chicken	MODERN SPECIES	20	TPM4 (ENSGALG00010027959)	RAB8A (ENSGALG00010027956)	CIB3 (ENSGALG00010027952)	FAM32A (ENSGALG00010027951)	AP1M1 (ENSGALG00010027946)	KLF2 (ENSGALG00010027941)	ENSGALG00010027936	CALR3 (ENSGALG00010027111)	C19orf44 (ENSGALG00010027109)	CHERP (ENSGALG00010027105)	SLC35E1 (ENSGALG00010028399)	MED26 (ENSGALG00010028391)	SMIM7 (ENSGALG00010027360)	TMEM38A (ENSGALG00010027351)	SIN3B (ENSGALG00010027346)	F2RL3 (ENSGALG00010027279) ##19	CPAMD8 (ENSGALG00010027275)	HAUS8 (ENSGALG00010027273)	MYO9B (ENSGALG00010027267)	USE1 (ENSGALG00010027262)	INSR (ENSGALG00010027254)	ARHGEF18 (ENSGALG00010027244)	PEX11G (ENSGALG00010027236)	ARRDC2 (ENSGALG00010027232)	ENSGALG00010027340	MAST3 (ENSGALG00010027335)	PIK3R2 (ENSGALG00010027324)	ENSGALG00010027321	MPV17L2 (ENSGALG00010027317)	RAB3A (ENSGALG00010027315)	ENSGALG00010027314
Chicken	MODERN SPECIES	4	ENSGALG00010011339	ENSGALG00010011354	ENSGALG00010011382	ENSGALG00010011398	ENSGALG00010011411	ENSGALG00010011416	ENSGALG00010011430	ENSGALG00010011432	ENSGALG00010011439	ENSGALG00010011446	ENSGALG00010011459	PCDHGC3 (ENSGALG00010011329)	HDAC3 (ENSGALG00010011478)	RELL2 (ENSGALG00010011491)	FCHSD1 (ENSGALG00010011536)	ENSGALG00010011548 ##19	ARAP3 (ENSGALG00010011564)	ENSGALG00010011575	PCDH1 (ENSGALG00010011619)	DELE1 (ENSGALG00010011630)	PCDH12 (ENSGALG00010011635)	ENSGALG00010012398	ECSCR (ENSGALG00010008266)	DNAJC18 (ENSGALG00010008276)	PROB1 (ENSGALG00010012406)	MZB1 (ENSGALG00010008277)	SLC23A1 (ENSGALG00010008305)	PAIP2B (ENSGALG00010008336)	MATR3 (ENSGALG00010008361)	SIL1 (ENSGALG00010008380)	CTNNA1 (ENSGALG00010008385)
Turkey	DUPLICATION
Turkey	MODERN SPECIES	23	ENSMGAG00000018037	TPM4 (ENSMGAG00000005761)	RAB8A (ENSMGAG00000016553)	CIB3 (ENSMGAG00000005738)	FAM32A (ENSMGAG00000021418)	AP1M1 (ENSMGAG00000005717)	ENSMGAG00000005712	EPS15L1 (ENSMGAG00000005657)	CALR3 (ENSMGAG00000005629)	ENSMGAG00000005624	CHERP (ENSMGAG00000005571)	SLC35E1 (ENSMGAG00000005552)	MED26 (ENSMGAG00000005545)	TMEM38A (ENSMGAG00000005518)	SIN3B (ENSMGAG00000005467)	F2RL3 (ENSMGAG00000015746) ##19	CPAMD8 (ENSMGAG00000005382)	ENSMGAG00000005368	MYO9B (ENSMGAG00000005297)	USE1 (ENSMGAG00000005285)	ENSMGAG00000005184	ENSMGAG00000005142	ENSMGAG00000005115	ARRDC2 (ENSMGAG00000004224)	MAST3 (ENSMGAG00000004850)	PIK3R2 (ENSMGAG00000005021)	IFI30 (ENSMGAG00000005001)	ENSMGAG00000018897	ENSMGAG00000018526	ENSMGAG00000020125	ENSMGAG00000021438
Turkey	MODERN SPECIES	6	ENSMGAG00000001057	NRG2 (ENSMGAG00000001012)	ENSMGAG00000000998	ENSMGAG00000018554	ENSMGAG00000021178	EIF4EBP3 (ENSMGAG00000017785)	ENSMGAG00000016957	ENSMGAG00000001180	ENSMGAG00000021611	ENSMGAG00000001894	PCDHGC5 (ENSMGAG00000020037)	ENSMGAG00000017781	HDAC3 (ENSMGAG00000002055)	RELL2 (ENSMGAG00000002034)	FCHSD1 (ENSMGAG00000002002)	ENSMGAG00000017369 ##19	ENSMGAG00000001939	ENSMGAG00000001227	DELE1 (ENSMGAG00000001258)	ENSMGAG00000001261	ENSMGAG00000017705	ECSCR (ENSMGAG00000019773)	DNAJC18 (ENSMGAG00000001310)	ENSMGAG00000021135	ENSMGAG00000021399	SLC23A1 (ENSMGAG00000001277)	PAIP2 (ENSMGAG00000001321)	MATR3 (ENSMGAG00000001331)	SIL1 (ENSMGAG00000001358)	ENSMGAG00000001368	LRRTM2 (ENSMGAG00000021439)
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	3	RAB8A (ENSCPRG00005017794)	CIB3 (ENSCPRG00005017792)	AP1M1 (ENSCPRG00005017788)	ENSCPRG00005017785	EPS15L1 (ENSCPRG00005017291)	CALR3 (ENSCPRG00005017190)	C19orf44 (ENSCPRG00005017188)	CHERP (ENSCPRG00005017109)	SLC35E1 (ENSCPRG00005017079)	MED26 (ENSCPRG00005017077)	ENSCPRG00005017074	TMEM38A (ENSCPRG00005017069)	ENSCPRG00005017068	NWD1 (ENSCPRG00005017060)	SIN3B (ENSCPRG00005017017)	F2RL3 (ENSCPRG00005017006) ##19	CPAMD8 (ENSCPRG00005016974)	ENSCPRG00005016950	MYO9B (ENSCPRG00005016432)	INSR (ENSCPRG00005016365)	ARHGEF18 (ENSCPRG00005016360)	PEX11G (ENSCPRG00005016356)	ARRDC2 (ENSCPRG00005016350)	ENSCPRG00005016343	MAST3 (ENSCPRG00005015910)	PIK3R2 (ENSCPRG00005015821)	IFI30 (ENSCPRG00005015813)	MPV17L2 (ENSCPRG00005015809)	RAB3A (ENSCPRG00005015806)	ENSCPRG00005015804	ENSCPRG00005015785
Australian saltwater crocodile	MODERN SPECIES	34	SLC4A9 (ENSCPRG00005001036)	ANKHD1 (ENSCPRG00005001236)	SRA1 (ENSCPRG00005002565)	ENSCPRG00005002570	ENSCPRG00005002579	ENSCPRG00005002594	ENSCPRG00005002603	PCDHGC3 (ENSCPRG00005002608)	PCDHGC5 (ENSCPRG00005002618)	ENSCPRG00005002622	ENSCPRG00005002623	DIAPH1 (ENSCPRG00005002640)	HDAC3 (ENSCPRG00005002653)	RELL2 (ENSCPRG00005002667)	FCHSD1 (ENSCPRG00005002675)	ENSCPRG00005002705 ##19	ARAP3 (ENSCPRG00005002744)	ENSCPRG00005002965	PCDH1 (ENSCPRG00005003005)	SLC23A1 (ENSCPRG00005003014)	PAIP2 (ENSCPRG00005003025)	MATR3 (ENSCPRG00005003029)	SIL1 (ENSCPRG00005003062)	CTNNA1 (ENSCPRG00005003079)	LRRTM2 (ENSCPRG00005003083)	HSPA9 (ENSCPRG00005003093)	ETF1 (ENSCPRG00005003109)	FBXW11 (ENSCPRG00005003113)	FGF18 (ENSCPRG00005003136)	ENSCPRG00005003148	TLX3 (ENSCPRG00005003183)
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000157924	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361	ENSGT00940000156845	ENSGT00390000010974	ENSGT00940000160620.db	ENSGT00940000158959.b
Episquamata	ANCESTRAL SPECIES	26	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434
Laterata	ANCESTRAL SPECIES	47	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.a.a.b.a.b	ENSGT00940000163163	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361.a	ENSGT00390000011943.b	ENSGT00390000011943.a.a	ENSGT00530000063553.b.a	ENSGT00940000159972
Argentine black and white tegu	MODERN SPECIES	174	RAB8A (ENSSMRG00000006878)	FAM32A (ENSSMRG00000006871)	TPM4 (ENSSMRG00000006865)	KLF2 (ENSSMRG00000006861)	EPS15L1 (ENSSMRG00000006564)	CALR3 (ENSSMRG00000006258)	ENSSMRG00000006252	CHERP (ENSSMRG00000006130)	SLC35E1 (ENSSMRG00000006128)	MED26 (ENSSMRG00000006127)	SMIM7 (ENSSMRG00000006124)	TMEM38A (ENSSMRG00000006123)	ENSSMRG00000006120	NWD1 (ENSSMRG00000006115)	SIN3B (ENSSMRG00000006110)	F2RL3 (ENSSMRG00000006109) ##19	CPAMD8 (ENSSMRG00000006096)	IFI30 (ENSSMRG00000006090)	PIK3R2 (ENSSMRG00000006071)	MAST3 (ENSSMRG00000005660)	ENSSMRG00000005652	ARRDC2 (ENSSMRG00000005647)	PEX11G (ENSSMRG00000005646)	ARHGEF18 (ENSSMRG00000005643)	ENSSMRG00000005628	INSR (ENSSMRG00000005612)	USE1 (ENSSMRG00000005600)	RPL36 (ENSSMRG00000005597)	LONP1 (ENSSMRG00000005592)	SLC1A6 (ENSSMRG00000005591)	NDUFA11 (ENSSMRG00000005577)
Common wall lizard	MODERN SPECIES	9	SLC35E1 (ENSPMRG00000023447)	CHERP (ENSPMRG00000023459)	CALR3 (ENSPMRG00000023490)	EPS15L1 (ENSPMRG00000023544)	KLF2 (ENSPMRG00000023600)	ENSPMRG00000023603	TPM4 (ENSPMRG00000023606)	FAM32A (ENSPMRG00000023607)	TIMM13 (ENSPMRG00000023609)	RAB8A (ENSPMRG00000023613)	AP1M1 (ENSPMRG00000021002)	ELAVL1 (ENSPMRG00000021014)	ENSPMRG00000021020	ENSPMRG00000021046	SIN3B (ENSPMRG00000021102)	F2RL3 (ENSPMRG00000021328) ##19	CPAMD8 (ENSPMRG00000021337)	ENSPMRG00000021360	PIK3R2 (ENSPMRG00000021395)	ENSPMRG00000021568	MAST3 (ENSPMRG00000021572)	ARRDC2 (ENSPMRG00000021585)	PEX11G (ENSPMRG00000021591)	ARHGEF18 (ENSPMRG00000021611)	INSR (ENSPMRG00000021675)	ENSPMRG00000021912	ENSPMRG00000021923	RPL36 (ENSPMRG00000021932)	LONP1 (ENSPMRG00000021946)	SLC1A6 (ENSPMRG00000021969)	NDUFA11 (ENSPMRG00000021986)
Toxicofera	ANCESTRAL SPECIES	53	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000158588
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000164804	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a ##19	ENSGT00940000162399	ENSGT00390000010450	ENSGT00940000164804	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212
Eastern brown snake	MODERN SPECIES	10	AP1M1 (ENSPTXG00000001454)	ENSPTXG00000001459	FAM32A (ENSPTXG00000001464)	ENSPTXG00000001467	ENSPTXG00000001468	ENSPTXG00000001470	EPS15L1 (ENSPTXG00000001534)	CALR3 (ENSPTXG00000001988)	CHERP (ENSPTXG00000001995)	SLC35E1 (ENSPTXG00000002000)	MED26 (ENSPTXG00000002002)	SMIM7 (ENSPTXG00000002005)	TMEM38A (ENSPTXG00000002007)	NWD1 (ENSPTXG00000002008)	SIN3B (ENSPTXG00000002012)	F2RL3 (ENSPTXG00000002015) ##19	CPAMD8 (ENSPTXG00000002017)	ENSPTXG00000002023	PIK3R2 (ENSPTXG00000002028)	ARRDC2 (ENSPTXG00000002066)	ENSPTXG00000002069	PEX11G (ENSPTXG00000002070)	ARHGEF18 (ENSPTXG00000002072)	INSR (ENSPTXG00000002076)	USE1 (ENSPTXG00000002078)	RPL36 (ENSPTXG00000002080)	LONP1 (ENSPTXG00000002083)	SLC1A6 (ENSPTXG00000002096)	NDUFA11 (ENSPTXG00000002099)	VMAC (ENSPTXG00000002102)	ENSPTXG00000002105
Mainland tiger snake	MODERN SPECIES	35	FAM32A (ENSNSUG00000016075)	ENSNSUG00000016076	ENSNSUG00000016077	ENSNSUG00000016079	ENSNSUG00000016080	ENSNSUG00000016081	CALR3 (ENSNSUG00000016082)	ENSNSUG00000016083	CHERP (ENSNSUG00000016084)	SLC35E1 (ENSNSUG00000016089)	MED26 (ENSNSUG00000016091)	SMIM7 (ENSNSUG00000016093)	TMEM38A (ENSNSUG00000016095)	NWD1 (ENSNSUG00000016098)	SIN3B (ENSNSUG00000016100)	F2RL3 (ENSNSUG00000016102) ##19	ENSNSUG00000016103	IFI30 (ENSNSUG00000016104)	ENSNSUG00000016105	MAST3 (ENSNSUG00000016262)	ARRDC2 (ENSNSUG00000016264)	PEX11G (ENSNSUG00000016308)	ARHGEF18 (ENSNSUG00000016310)	INSR (ENSNSUG00000016317)	USE1 (ENSNSUG00000016320)	ENSNSUG00000016321	LONP1 (ENSNSUG00000016322)	ENSNSUG00000016475	NDUFA11 (ENSNSUG00000016829)	ENSNSUG00000016830	ENSNSUG00000016831
Blue-lipped sea krait	MODERN SPECIES	4243																F2RL3 (ENSLLTG00000002986) ##19
Indian cobra	MODERN SPECIES		ENSNNAG00000005213	FAM32A (ENSNNAG00000005236)	ENSNNAG00000005262	ENSNNAG00000005285	ENSNNAG00000005296	EPS15L1 (ENSNNAG00000005344)	CALR3 (ENSNNAG00000005559)	ENSNNAG00000005659	CHERP (ENSNNAG00000005709)	SLC35E1 (ENSNNAG00000005958)	MED26 (ENSNNAG00000005983)	SMIM7 (ENSNNAG00000005990)	TMEM38A (ENSNNAG00000006014)	NWD1 (ENSNNAG00000006059)	SIN3B (ENSNNAG00000006265)	F2RL3 (ENSNNAG00000006751) ##19	CPAMD8 (ENSNNAG00000006789)	IFI30 (ENSNNAG00000006921)	PIK3R2 (ENSNNAG00000006970)	MAST3 (ENSNNAG00000007037)	ENSNNAG00000007061	ARRDC2 (ENSNNAG00000007086)	PEX11G (ENSNNAG00000007119)	ARHGEF18 (ENSNNAG00000007143)	INSR (ENSNNAG00000007213)	USE1 (ENSNNAG00000007291)	RPL36 (ENSNNAG00000007310)	LONP1 (ENSNNAG00000007326)	SLC1A6 (ENSNNAG00000007361)	NDUFA11 (ENSNNAG00000007399)	ENSNNAG00000007413
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1565	CIB3 (ENSSPUG00000008655)	FAM32A (ENSSPUG00000008665)	COX6B2 (ENSSPUG00000008679)	AP1M1 (ENSSPUG00000008702)	ENSSPUG00000008715	ENSSPUG00000008726	ENSSPUG00000008737	ENSSPUG00000008741	CALR3 (ENSSPUG00000008775)	ENSSPUG00000008889	CHERP (ENSSPUG00000008901)	SMIM7 (ENSSPUG00000008944)	TMEM38A (ENSSPUG00000008953)	NWD1 (ENSSPUG00000008997)	SIN3B (ENSSPUG00000009147)	F2RL3 (ENSSPUG00000009184) ##19	ENSSPUG00000009193	IFI30 (ENSSPUG00000009238)	PIK3R2 (ENSSPUG00000009265)	MAST3 (ENSSPUG00000009422)	ARRDC2 (ENSSPUG00000009652)	PEX11G (ENSSPUG00000009674)	ENSSPUG00000009720	INSR (ENSSPUG00000009734)	USE1 (ENSSPUG00000009768)	MYO9B (ENSSPUG00000009847)	HAUS8 (ENSSPUG00000010057)	MPV17L2 (ENSSPUG00000010086)	ENSSPUG00000010099	ENSSPUG00000010116	LSM4 (ENSSPUG00000010166)
tuatara	MODERN SPECIES	154				ENSSPUG00000002235	ENSSPUG00000002228	ENSSPUG00000002221	ENSSPUG00000002217	ENSSPUG00000002212	ENSSPUG00000002189	ENSSPUG00000002183	ENSSPUG00000002167	ENSSPUG00000002160	ENSSPUG00000002152	RELL2 (ENSSPUG00000002143)	ENSSPUG00000002133	ENSSPUG00000002131 ##19	ARAP3 (ENSSPUG00000002024)	ENSSPUG00000002011	ENSSPUG00000001991	PCDH1 (ENSSPUG00000001979)	DELE1 (ENSSPUG00000001923)	PCDH12 (ENSSPUG00000001890)	POLR3F (ENSSPUG00000001873)	ENSSPUG00000001858	ENSSPUG00000001805	KAT14 (ENSSPUG00000001794)	PET117 (ENSSPUG00000001784)	ENSSPUG00000001720
Gnathostomata	ANCESTRAL SPECIES	58						ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.a.a ##20	ENSGT00950000183076.a.b.b.a.b ##20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Amniota	ANCESTRAL SPECIES	4	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Theria	ANCESTRAL SPECIES	11	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Tenrec	MODERN SPECIES	11116																F2RL2 (ENSETEG00000017167) #19
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Elephant	MODERN SPECIES	526	ARSB (ENSLAFG00000018055) #36	LHFPL2 (ENSLAFG00000009378) #34	SCAMP1 (ENSLAFG00000009372) #33	AP3B1 (ENSLAFG00000010496) #31	TBCA (ENSLAFG00000005316) #30	OTP (ENSLAFG00000007704) #29	WDR41 (ENSLAFG00000005066) #28	PDE8B (ENSLAFG00000015612) #27	ZBED3 (ENSLAFG00000001192) #26	AGGF1 (ENSLAFG00000012029) #25	ENSLAFG00000027371	CRHBP (ENSLAFG00000013037) #24	S100Z (ENSLAFG00000013035) #23	F2RL1 (ENSLAFG00000001287) #22	F2R (ENSLAFG00000003741) #21	F2RL2 (ENSLAFG00000029045) #19	IQGAP2 (ENSLAFG00000000760) #20	SV2C (ENSLAFG00000003003) #18	POC5 (ENSLAFG00000014703) #16	ANKDD1B (ENSLAFG00000020937) #15	POLK (ENSLAFG00000013297) #14	CERT1 (ENSLAFG00000013294) #13	HMGCR (ENSLAFG00000013291) #12	ENSLAFG00000026415 #11	GCNT4 (ENSLAFG00000027464) #10	FAM169A (ENSLAFG00000009907) #9	ENSLAFG00000009910 ##7	GFM2 (ENSLAFG00000018575)	HEXB (ENSLAFG00000018570)	ENC1 (ENSLAFG00000007895)	ARHGEF28 (ENSLAFG00000011204)
Hyrax	MODERN SPECIES	7186															ENSPCAG00000002325 #21	F2RL2 (ENSPCAG00000002308) #19	IQGAP2 (ENSPCAG00000002145) #20	ENSPCAG00000002114
Xenarthra	ANCESTRAL SPECIES	234										ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b
Armadillo	MODERN SPECIES	2327								ENSDNOG00000038167	ENSDNOG00000049258	ZBED3 (ENSDNOG00000041041) #26	AGGF1 (ENSDNOG00000018473) #25	CRHBP (ENSDNOG00000015234) #24	S100Z (ENSDNOG00000002472) #23	F2RL1 (ENSDNOG00000010306) #22	F2R (ENSDNOG00000047767) #21	F2RL2 (ENSDNOG00000035458) #19	IQGAP2 (ENSDNOG00000005342) #20	SV2C (ENSDNOG00000005312) #18	ENSDNOG00000034724	ENSDNOG00000035029	POC5 (ENSDNOG00000010175) #16	ANKDD1B (ENSDNOG00000025636) #15	POLK (ENSDNOG00000003405) #14	CERT1 (ENSDNOG00000037153) #13	HMGCR (ENSDNOG00000006472) #12	ENSDNOG00000001464
Sloth	MODERN SPECIES	3755																ENSCHOG00000006780 #19	IQGAP2 (ENSCHOG00000006742) #20
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00950000185529	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Suina	ANCESTRAL SPECIES	11	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.f #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Pig	MODERN SPECIES	10	SCAMP1 (ENSSSCG00000034795) #33	AP3B1 (ENSSSCG00000014101) #31	ENSSSCG00000034241	TBCA (ENSSSCG00000014100) #30	OTP (ENSSSCG00000014099) #29	ENSSSCG00000014098 #28	ENSSSCG00000051837 #28	ENSSSCG00000014096	PDE8B (ENSSSCG00000014097) #27	ENSSSCG00000050058	AGGF1 (ENSSSCG00000014094) #25	CRHBP (ENSSSCG00000014093) #24	S100Z (ENSSSCG00000014092) #23	F2RL1 (ENSSSCG00000014091) #22	F2R (ENSSSCG00000035355) #21	F2RL2 (ENSSSCG00000037582) #19	ENSSSCG00000045040	IQGAP2 (ENSSSCG00000014088) #20	SV2C (ENSSSCG00000034062) #18	POC5 (ENSSSCG00000014084) #16	ANKDD1B (ENSSSCG00000014083) #15	POLK (ENSSSCG00000014082) #14	ENSSSCG00000058855	CERT1 (ENSSSCG00000014081) #13	HMGCR (ENSSSCG00000014080) #12	ANKRD31 (ENSSSCG00000014079) #11	ENSSSCG00000014078	GCNT4 (ENSSSCG00000029710) #10	FAM169A (ENSSSCG00000014076) #9	ENSSSCG00000014075 #7	GFM2 (ENSSSCG00000014074)
Chacoan peccary	MODERN SPECIES	204	DMGDH (ENSCWAG00000010632) #37	ARSB (ENSCWAG00000010599) #36	LHFPL2 (ENSCWAG00000010566) #34	SCAMP1 (ENSCWAG00000010485) #33	AP3B1 (ENSCWAG00000010356) #31	TBCA (ENSCWAG00000010250) #30	OTP (ENSCWAG00000010193) #29	WDR41 (ENSCWAG00000010043) #28	PDE8B (ENSCWAG00000008441) #27	ZBED3 (ENSCWAG00000008305) #26	AGGF1 (ENSCWAG00000008243) #25	CRHBP (ENSCWAG00000008117) #24	ENSCWAG00000008077 #23	F2RL1 (ENSCWAG00000008039) #22	F2R (ENSCWAG00000008004) #21	F2RL2 (ENSCWAG00000007970) #19	IQGAP2 (ENSCWAG00000003644) #20	SV2C (ENSCWAG00000003605) #18	POC5 (ENSCWAG00000003563) #16	ANKDD1B (ENSCWAG00000003540) #15	POLK (ENSCWAG00000003477) #14	CERT1 (ENSCWAG00000003403) #13	HMGCR (ENSCWAG00000003368) #12
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00530000063000.a.a.a.f	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00530000063000.a.a.a.f	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831.k
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000154586.g.b	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000154586.g.b	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Beluga whale	MODERN SPECIES	71	ARSB (ENSDLEG00000014686) #36	LHFPL2 (ENSDLEG00000014699) #34	SCAMP1 (ENSDLEG00000014708) #33	AP3B1 (ENSDLEG00000014741) #31	TBCA (ENSDLEG00000014906) #30	OTP (ENSDLEG00000014945) #29	WDR41 (ENSDLEG00000014960) #28	PDE8B (ENSDLEG00000015062) #27	ZBED3 (ENSDLEG00000007936) #26	AGGF1 (ENSDLEG00000007958) #25	CRHBP (ENSDLEG00000007986) #24	S100Z (ENSDLEG00000008008) #23	F2RL1 (ENSDLEG00000008016) #22	F2R (ENSDLEG00000008028) #21	IQGAP2 (ENSDLEG00000008039) #20	F2RL2 (ENSDLEG00000008080) #19	ENSDLEG00000008092	SV2C (ENSDLEG00000008107) #18	ENSDLEG00000008154	POC5 (ENSDLEG00000008196) #16	POLK (ENSDLEG00000008261) #14	COL4A3BP (ENSDLEG00000008328) #13	HMGCR (ENSDLEG00000008447) #12	ANKRD31 (ENSDLEG00000008542) #11	GCNT4 (ENSDLEG00000008712) #10	FAM169A (ENSDLEG00000008731) #9	NSA2 (ENSDLEG00000008766) #7	GFM2 (ENSDLEG00000008794)	HEXB (ENSDLEG00000009012)	ENC1 (ENSDLEG00000009379)	ARHGEF28 (ENSDLEG00000009420)
Narwhal	MODERN SPECIES	298	DMGDH (ENSMMNG00015008374) #37	ARSB (ENSMMNG00015008346) #36	LHFPL2 (ENSMMNG00015008328) #34	SCAMP1 (ENSMMNG00015008303) #33	AP3B1 (ENSMMNG00015008260) #31	TBCA (ENSMMNG00015008230) #30	OTP (ENSMMNG00015008215) #29	WDR41 (ENSMMNG00015008176) #28	PDE8B (ENSMMNG00015008112) #27	ZBED3 (ENSMMNG00015008041) #26	AGGF1 (ENSMMNG00015008009) #25	CRHBP (ENSMMNG00015007977) #24	S100Z (ENSMMNG00015007958) #23	F2RL1 (ENSMMNG00015007943) #22	F2R (ENSMMNG00015007933) #21	F2RL2 (ENSMMNG00015007923) #19	IQGAP2 (ENSMMNG00015007731) #20	ENSMMNG00015007640	SV2C (ENSMMNG00015007600) #18	POC5 (ENSMMNG00015007540) #16	ANKDD1B (ENSMMNG00015007467) #15	POLK (ENSMMNG00015007374) #14	CERT1 (ENSMMNG00015007218) #13	HMGCR (ENSMMNG00015007107) #12	ANKRD31 (ENSMMNG00015007010) #11	GCNT4 (ENSMMNG00015006954) #10	FAM169A (ENSMMNG00015006911) #9	ENSMMNG00015006875 #7	GFM2 (ENSMMNG00015006841)	HEXB (ENSMMNG00015006771)	ENC1 (ENSMMNG00015006752)
Vaquita	MODERN SPECIES	14	ARSB (ENSPSNG00000004356) #36	LHFPL2 (ENSPSNG00000004403) #34	SCAMP1 (ENSPSNG00000004447) #33	AP3B1 (ENSPSNG00000004553) #31	TBCA (ENSPSNG00000004666) #30	OTP (ENSPSNG00000004725) #29	WDR41 (ENSPSNG00000004776) #28	PDE8B (ENSPSNG00000005114) #27	ZBED3 (ENSPSNG00000005710) #26	AGGF1 (ENSPSNG00000005724) #25	CRHBP (ENSPSNG00000005773) #24	S100Z (ENSPSNG00000005821) #23	F2RL1 (ENSPSNG00000005843) #22	F2R (ENSPSNG00000005065) #21	IQGAP2 (ENSPSNG00000005144) #20	F2RL2 (ENSPSNG00000005286) #19	SV2C (ENSPSNG00000005309) #18	ENSPSNG00000005362	POC5 (ENSPSNG00000005438) #16	POLK (ENSPSNG00000005609) #14	CERT1 (ENSPSNG00000005809) #13	HMGCR (ENSPSNG00000006005) #12	ANKRD31 (ENSPSNG00000006120) #11	GCNT4 (ENSPSNG00000006178) #10	FAM169A (ENSPSNG00000006255) #9	ENSPSNG00000006396 #7	GFM2 (ENSPSNG00000006458)	HEXB (ENSPSNG00000006550)	ENC1 (ENSPSNG00000006635)	ARHGEF28 (ENSPSNG00000006700)	UTP15 (ENSPSNG00000006804)
Dolphin	MODERN SPECIES	95															F2R (ENSTTRG00000007302) #21	F2RL2 (ENSTTRG00000007301) #19	IQGAP2 (ENSTTRG00000007299) #20	SV2C (ENSTTRG00000007297) #18
Sperm whale	MODERN SPECIES	19	DMGDH (ENSPCTG00005003853) #37	ARSB (ENSPCTG00005003811) #36	LHFPL2 (ENSPCTG00005003792) #34	SCAMP1 (ENSPCTG00005003758) #33	AP3B1 (ENSPCTG00005003664) #31	TBCA (ENSPCTG00005003597) #30	OTP (ENSPCTG00005003577) #29	WDR41 (ENSPCTG00005003516) #28	PDE8B (ENSPCTG00005002983) #27	ZBED3 (ENSPCTG00005002866) #26	AGGF1 (ENSPCTG00005002832) #25	S100Z (ENSPCTG00005002807) #23	F2RL1 (ENSPCTG00005002799) #22	F2R (ENSPCTG00005002792) #21	ENSPCTG00005002778	F2RL2 (ENSPCTG00005002767) #19	IQGAP2 (ENSPCTG00005002535) #20	SV2C (ENSPCTG00005002439) #18	POC5 (ENSPCTG00005002372) #16	POLK (ENSPCTG00005002299) #14	COL4A3BP (ENSPCTG00005002102) #13	HMGCR (ENSPCTG00005002015) #12	ANKRD31 (ENSPCTG00005001908) #11	GCNT4 (ENSPCTG00005001860) #10	ENSPCTG00005001839	FAM169A (ENSPCTG00005001823) #9	NSA2 (ENSPCTG00005001800) #7	GFM2 (ENSPCTG00005001720)	HEXB (ENSPCTG00005001638)	ENC1 (ENSPCTG00005001616)	ARHGEF28 (ENSPCTG00005001544)
Blue whale	MODERN SPECIES	14	ARSB (ENSBMSG00010006407) #36	LHFPL2 (ENSBMSG00010006395) #34	SCAMP1 (ENSBMSG00010006378) #33	AP3B1 (ENSBMSG00010006360) #31	ENSBMSG00010006352	ENSBMSG00010006335 #30	OTP (ENSBMSG00010006319) #29	WDR41 (ENSBMSG00010006297) #28	PDE8B (ENSBMSG00010005858) #27	ZBED3 (ENSBMSG00010005760) #26	AGGF1 (ENSBMSG00010005734) #25	CRHBP (ENSBMSG00010005714) #24	S100Z (ENSBMSG00010005711) #23	F2RL1 (ENSBMSG00010005699) #22	F2R (ENSBMSG00010005694) #21	F2RL2 (ENSBMSG00010005686) #19	IQGAP2 (ENSBMSG00010005591) #20	ENSBMSG00010005549	SV2C (ENSBMSG00010005531) #18	POC5 (ENSBMSG00010005501) #16	POLK (ENSBMSG00010005438) #14	CERT1 (ENSBMSG00010004912) #13	HMGCR (ENSBMSG00010004832) #12	ANKRD31 (ENSBMSG00010004774) #11	GCNT4 (ENSBMSG00010004754) #10	ENSBMSG00010004732	ENSBMSG00010004714 #9	ENSBMSG00010004702 #7	GFM2 (ENSBMSG00010004689)	HEXB (ENSBMSG00010004665)	ENC1 (ENSBMSG00010004655)
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b
Bovinae	ANCESTRAL SPECIES	33	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000001830.j	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129
Bos	ANCESTRAL SPECIES	31	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b
Cow	MODERN SPECIES	1	ARSB (ENSBTAG00000008341) #36	LHFPL2 (ENSBTAG00000007374) #34	SCAMP1 (ENSBTAG00000007371) #33	AP3B1 (ENSBTAG00000005016) #31	ENSBTAG00000052130	TBCA (ENSBTAG00000003263) #30	OTP (ENSBTAG00000009249) #29	WDR41 (ENSBTAG00000020212) #28	PDE8B (ENSBTAG00000020205) #27	ZBED3 (ENSBTAG00000052845) #26	AGGF1 (ENSBTAG00000034823) #25	CRHBP (ENSBTAG00000020202) #24	S100Z (ENSBTAG00000020201) #23	F2RL1 (ENSBTAG00000034848) #22	F2R (ENSBTAG00000020199) #21	F2RL2 (ENSBTAG00000000898) #19	IQGAP2 (ENSBTAG00000000897) #20	ENSBTAG00000052974	SV2C (ENSBTAG00000017507) #18	POC5 (ENSBTAG00000007114) #16	POLK (ENSBTAG00000004028) #14	CERT1 (ENSBTAG00000000081) #13	HMGCR (ENSBTAG00000007840) #12	ANKRD31 (ENSBTAG00000024878) #11	GCNT4 (ENSBTAG00000050091) #10	DRD1 (ENSBTAG00000047719)	SFXN1 (ENSBTAG00000014536)	HRH2 (ENSBTAG00000044071)	CPLX2 (ENSBTAG00000054924)	THOC3 (ENSBTAG00000035174)	SIMC1 (ENSBTAG00000034998)
Hybrid Bos Indicus	MODERN SPECIES	1	ARSB (ENSBIXG00005009357) #36	SCAMP1 (ENSBIXG00005009438) #33	ENSBIXG00005009460	AP3B1 (ENSBIXG00005009658) #31	ENSBIXG00005009736	TBCA (ENSBIXG00005000599) #30	OTP (ENSBIXG00005009799) #29	WDR41 (ENSBIXG00005009893) #28	ENSBIXG00005000677	PDE8B (ENSBIXG00005010189) #27	ENSBIXG00005010267	AGGF1 (ENSBIXG00005010286) #25	CRHBP (ENSBIXG00005000840) #24	S100Z (ENSBIXG00005010347) #23	F2R (ENSBIXG00005000862) #21	F2RL2 (ENSBIXG00005010387) #19	IQGAP2 (ENSBIXG00005010623) #20	ENSBIXG00005007521	SV2C (ENSBIXG00005010694) #18	POC5 (ENSBIXG00005010780) #16	POLK (ENSBIXG00005011147) #14	CERT1 (ENSBIXG00005011247) #13	HMGCR (ENSBIXG00005011318) #12	ANKRD31 (ENSBIXG00005011423) #11	GCNT4 (ENSBIXG00005011458) #10
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b	ENSGT00390000000537
Wild yak	MODERN SPECIES	297					ENSBMUG00000010637	ENSBMUG00000010660	TBCA (ENSBMUG00000010673) #30	OTP (ENSBMUG00000010682) #29	WDR41 (ENSBMUG00000010747) #28	PDE8B (ENSBMUG00000011054) #27	AGGF1 (ENSBMUG00000011125) #25	S100Z (ENSBMUG00000011148) #23	F2RL1 (ENSBMUG00000011152) #22	F2R (ENSBMUG00000011164) #21	IQGAP2 (ENSBMUG00000011350) #20	F2RL2 (ENSBMUG00000011445) #19	ENSBMUG00000011462	SV2C (ENSBMUG00000011496) #18	POC5 (ENSBMUG00000011568) #16	POLK (ENSBMUG00000011634) #14	CERT1 (ENSBMUG00000011873) #13	HMGCR (ENSBMUG00000012171) #12	ANKRD31 (ENSBMUG00000012237) #11	GCNT4 (ENSBMUG00000012260) #10
Domestic yak	MODERN SPECIES	2	SCAMP1 (ENSBGRG00000005900) #33	AP3B1 (ENSBGRG00000006021) #31	ENSBGRG00000006222	TBCA (ENSBGRG00000006236) #30	OTP (ENSBGRG00000006298) #29	WDR41 (ENSBGRG00000006363) #28	PDE8B (ENSBGRG00000006555) #27	ZBED3 (ENSBGRG00000007380) #26	AGGF1 (ENSBGRG00000007412) #25	ENSBGRG00000007739	S100Z (ENSBGRG00000007761) #23	ENSBGRG00000007803	F2RL1 (ENSBGRG00000007822) #22	F2R (ENSBGRG00000007892) #21	IQGAP2 (ENSBGRG00000007931) #20	F2RL2 (ENSBGRG00000008567) #19	ENSBGRG00000008593	SV2C (ENSBGRG00000008621) #18	POC5 (ENSBGRG00000008737) #16	POLK (ENSBGRG00000009306) #14	CERT1 (ENSBGRG00000009779) #13	HMGCR (ENSBGRG00000010597) #12	ANKRD31 (ENSBGRG00000010828) #11	ENSBGRG00000011228	GCNT4 (ENSBGRG00000011247) #10	DRD1 (ENSBGRG00000011292)	SFXN1 (ENSBGRG00000011347)	ENSBGRG00000011575	HRH2 (ENSBGRG00000011598)	CPLX2 (ENSBGRG00000011765)	THOC3 (ENSBGRG00000011914)
American bison	MODERN SPECIES	3169			ARSB (ENSBBBG00000020814) #36	LHFPL2 (ENSBBBG00000020821) #34	SCAMP1 (ENSBBBG00000020857) #33	AP3B1 (ENSBBBG00000005629) #31	ENSBBBG00000005636	TBCA (ENSBBBG00000005639) #30	WDR41 (ENSBBBG00000021018) #28	PDE8B (ENSBBBG00000021396) #27	AGGF1 (ENSBBBG00000021443) #25	CRHBP (ENSBBBG00000021464) #24	S100Z (ENSBBBG00000021469) #23	F2RL1 (ENSBBBG00000021471) #22	F2R (ENSBBBG00000021478) #21	F2RL2 (ENSBBBG00000021481) #19	IQGAP2 (ENSBBBG00000021677) #20	ENSBBBG00000021689	SV2C (ENSBBBG00000006918) #18	POC5 (ENSBBBG00000021773) #16	ANKDD1B (ENSBBBG00000008030) #15	POLK (ENSBBBG00000021965) #14	CERT1 (ENSBBBG00000022291) #13	HMGCR (ENSBBBG00000005907) #12	ANKRD31 (ENSBBBG00000022499) #11	GCNT4 (ENSBBBG00000005939) #10	ENSBBBG00000022510	ENSBBBG00000005945	ENSBBBG00000005947
Caprinae	ANCESTRAL SPECIES	30	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00940000155857	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000158761	ENSGT00950000182938.a	ENSGT00940000158129	ENSGT00940000153451.a.a.b	ENSGT00390000000537	ENSGT00940000160347.b
Goat	MODERN SPECIES	1	LHFPL2 (ENSCHIG00000014180) #34	SCAMP1 (ENSCHIG00000025008) #33	ENSCHIG00000026947	AP3B1 (ENSCHIG00000018755) #31	TBCA (ENSCHIG00000021233) #30	OTP (ENSCHIG00000018904) #29	WDR41 (ENSCHIG00000023139) #28	PDE8B (ENSCHIG00000023152) #27	ZBED3 (ENSCHIG00000004171) #26	AGGF1 (ENSCHIG00000012662) #25	CRHBP (ENSCHIG00000024251) #24	S100Z (ENSCHIG00000018486) #23	F2RL1 (ENSCHIG00000026366) #22	F2R (ENSCHIG00000022474) #21	IQGAP2 (ENSCHIG00000020854) #20	F2RL2 (ENSCHIG00000002096) #19	SV2C (ENSCHIG00000016655) #18	POC5 (ENSCHIG00000009080) #16	ENSCHIG00000008486	POLK (ENSCHIG00000008105) #14	CERT1 (ENSCHIG00000021950) #13	HMGCR (ENSCHIG00000015556) #12	ENSCHIG00000021264 #11	GCNT4 (ENSCHIG00000008602) #10	ENSCHIG00000015735	DRD1 (ENSCHIG00000024371)	SFXN1 (ENSCHIG00000022473)	HRH2 (ENSCHIG00000022097)	CPLX2 (ENSCHIG00000026084)	THOC3 (ENSCHIG00000021665)	ENSCHIG00000020697
Rambouillet Sheep	MODERN SPECIES	23	ENSOARG00020024626 #23	SCAMP1 (ENSOARG00020024609) #33	ENSOARG00020024603	AP3B1 (ENSOARG00020024527) #31	TBCA (ENSOARG00020024464) #30	OTP (ENSOARG00020024451) #29	WDR41 (ENSOARG00020024404) #28	ENSOARG00020024389	PDE8B (ENSOARG00020023251) #27	ZBED3 (ENSOARG00020023150) #26	AGGF1 (ENSOARG00020023108) #25	CRHBP (ENSOARG00020023047) #24	S100Z (ENSOARG00020023021) #23	F2RL1 (ENSOARG00020023002) #22	F2R (ENSOARG00020022990) #21	F2RL2 (ENSOARG00020022973) #19	IQGAP2 (ENSOARG00020021962) #20	SV2C (ENSOARG00020021763) #18	POC5 (ENSOARG00020021712) #16	POLK (ENSOARG00020021498) #14	CERT1 (ENSOARG00020020967) #13	HMGCR (ENSOARG00020020760) #12	ENSOARG00020020636 #11	GCNT4 (ENSOARG00020020622) #10	ENSOARG00020020572	SFXN1 (ENSOARG00020020382)	HRH2 (ENSOARG00020020329)	CPLX2 (ENSOARG00020020263)	THOC3 (ENSOARG00020020205)	ENSOARG00020020067	KIAA1191 (ENSOARG00020019972)
Siberian musk deer	MODERN SPECIES	69	LHFPL2 (ENSMMSG00000017736) #34	SCAMP1 (ENSMMSG00000017674) #33	AP3B1 (ENSMMSG00000017470) #31	ENSMMSG00000017442	ENSMMSG00000017301	OTP (ENSMMSG00000017274) #29	WDR41 (ENSMMSG00000017180) #28	PDE8B (ENSMMSG00000015917) #27	ZBED3 (ENSMMSG00000015777) #26	AGGF1 (ENSMMSG00000015751) #25	ENSMMSG00000015737	CRHBP (ENSMMSG00000015697) #24	S100Z (ENSMMSG00000015687) #23	F2RL1 (ENSMMSG00000015677) #22	F2R (ENSMMSG00000015666) #21	F2RL2 (ENSMMSG00000015650) #19	IQGAP2 (ENSMMSG00000015431) #20	SV2C (ENSMMSG00000015327) #18	POC5 (ENSMMSG00000015294) #16	POLK (ENSMMSG00000015182) #14	CERT1 (ENSMMSG00000014921) #13	HMGCR (ENSMMSG00000014812) #12	ANKRD31 (ENSMMSG00000014614) #11	GCNT4 (ENSMMSG00000014582) #10	ENSMMSG00000014567	ENSMMSG00000014552	DRD1 (ENSMMSG00000014544)	SFXN1 (ENSMMSG00000014529)	HRH2 (ENSMMSG00000014518)	CPLX2 (ENSMMSG00000014503)	THOC3 (ENSMMSG00000014480)
Yarkand deer	MODERN SPECIES	3	ENSCHYG00000007338	TBCA (ENSCHYG00000007320) #30	OTP (ENSCHYG00000007305) #29	WDR41 (ENSCHYG00000007090) #28	ENSCHYG00000007028 #27	ENSCHYG00000006962 #27	ENSCHYG00000006952	ENSCHYG00000006937	ZBED3 (ENSCHYG00000006906) #26	AGGF1 (ENSCHYG00000006866) #25	CRHBP (ENSCHYG00000006799) #24	S100Z (ENSCHYG00000006771) #23	F2RL1 (ENSCHYG00000006741) #22	ENSCHYG00000006719	F2R (ENSCHYG00000006697) #21	F2RL2 (ENSCHYG00000006675) #19	IQGAP2 (ENSCHYG00000006385) #20	SV2C (ENSCHYG00000006307) #18	POC5 (ENSCHYG00000006247) #16	POLK (ENSCHYG00000006041) #14	CERT1 (ENSCHYG00000005851) #13	HMGCR (ENSCHYG00000005715) #12	ANKRD31 (ENSCHYG00000005425) #11	GCNT4 (ENSCHYG00000005367) #10	DRD1 (ENSCHYG00000005319)	SFXN1 (ENSCHYG00000005262)	HRH2 (ENSCHYG00000005212)	CPLX2 (ENSCHYG00000005163)	THOC3 (ENSCHYG00000005114)	SIMC1 (ENSCHYG00000005071)	ENSCHYG00000005024
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.n ##7	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Arabian camel	MODERN SPECIES	22	LHFPL2 (ENSCDRG00005000275) #34	SCAMP1 (ENSCDRG00005000299) #33	AP3B1 (ENSCDRG00005000366) #31	TBCA (ENSCDRG00005000444) #30	OTP (ENSCDRG00005000470) #29	WDR41 (ENSCDRG00005000509) #28	PDE8B (ENSCDRG00005000565) #27	ZBED3 (ENSCDRG00005000608) #26	AGGF1 (ENSCDRG00005000618) #25	CRHBP (ENSCDRG00005000645) #24	ENSCDRG00005000661	S100Z (ENSCDRG00005000678) #23	F2RL1 (ENSCDRG00005000688) #22	F2R (ENSCDRG00005000707) #21	IQGAP2 (ENSCDRG00005000766) #20	F2RL2 (ENSCDRG00005001095) #19	SV2C (ENSCDRG00005001113) #18	POC5 (ENSCDRG00005001127) #16	ANKDD1B (ENSCDRG00005001160) #15	POLK (ENSCDRG00005001206) #14	CERT1 (ENSCDRG00005001455) #13	HMGCR (ENSCDRG00005002491) #12	ANKRD31 (ENSCDRG00005002546) #11	GCNT4 (ENSCDRG00005002583) #10	ENSCDRG00005002592	FAM169A (ENSCDRG00005002601) #9	ENSCDRG00005002639 ##7	GFM2 (ENSCDRG00005002671)	HEXB (ENSCDRG00005002726)	ENC1 (ENSCDRG00005002750)	ARHGEF28 (ENSCDRG00005002784)
Alpaca	MODERN SPECIES	961															F2R (ENSVPAG00000005276) #21	F2RL2 (ENSVPAG00000005275) #19	IQGAP2 (ENSVPAG00000005272) #20
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Ursidae	ANCESTRAL SPECIES	16	ENSGT00390000003122.c.b	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a.t	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Ursus	ANCESTRAL SPECIES	3	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00950000182901.a.a.b.a.b.b	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00950000182967.a.a.a.a.a.a.d	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a.t	ENSGT00950000182983.B.a.b
American black bear	MODERN SPECIES	1047														F2R (ENSUAMG00000015915) #21	IQGAP2 (ENSUAMG00000015974) #20	F2RL2 (ENSUAMG00000016688) #19
Polar bear	MODERN SPECIES	173						AP3B1 (ENSUMAG00000004124) #31	ENSUMAG00000004694	WDR41 (ENSUMAG00000004705) #28	PDE8B (ENSUMAG00000004797) #27	ENSUMAG00000005026	AGGF1 (ENSUMAG00000005048) #25	CRHBP (ENSUMAG00000005059) #24	F2RL1 (ENSUMAG00000005075) #22	F2R (ENSUMAG00000005082) #21	IQGAP2 (ENSUMAG00000005302) #20	F2RL2 (ENSUMAG00000007111) #19	SV2C (ENSUMAG00000007138) #18	POC5 (ENSUMAG00000007198) #16	ANKDD1B (ENSUMAG00000007210) #15	ENSUMAG00000007224	POLK (ENSUMAG00000007228) #14	CERT1 (ENSUMAG00000007238) #13	HMGCR (ENSUMAG00000007258) #12	ENSUMAG00000007271	ENSUMAG00000007284 #11	GCNT4 (ENSUMAG00000007290) #10	FAM169A (ENSUMAG00000007308) #9	ENSUMAG00000007325 #7	GFM2 (ENSUMAG00000007328)	HEXB (ENSUMAG00000007343)	ENC1 (ENSUMAG00000007465)
Giant Panda	MODERN SPECIES	13	BHMT2 (ENSAMEG00000005719)	DMGDH (ENSAMEG00000005739) #37	ARSB (ENSAMEG00000005783) #36	LHFPL2 (ENSAMEG00000005794) #34	SCAMP1 (ENSAMEG00000005799) #33	AP3B1 (ENSAMEG00000005816) #31	TBCA (ENSAMEG00000027837) #30	OTP (ENSAMEG00000028076) #29	WDR41 (ENSAMEG00000005933) #28	ENSAMEG00000028764	PDE8B (ENSAMEG00000005971) #27	AGGF1 (ENSAMEG00000001833) #25	CRHBP (ENSAMEG00000001817) #24	F2RL1 (ENSAMEG00000001809) #22	F2R (ENSAMEG00000018602) #21	F2RL2 (ENSAMEG00000001805) #19	IQGAP2 (ENSAMEG00000001638) #20	SV2C (ENSAMEG00000000836) #18	POC5 (ENSAMEG00000000800) #16	ANKDD1B (ENSAMEG00000000782) #15	POLK (ENSAMEG00000000744) #14	CERT1 (ENSAMEG00000000701) #13	HMGCR (ENSAMEG00000000634) #12	ENSAMEG00000030480	ENSAMEG00000000627 #11	GCNT4 (ENSAMEG00000029130) #10	FAM169A (ENSAMEG00000000608) #9	ENSAMEG00000000593 #7	GFM2 (ENSAMEG00000000544)	HEXB (ENSAMEG00000000487)	ENC1 (ENSAMEG00000019026)
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000153593.c.b	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618.g #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00390000018706.n ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
American mink	MODERN SPECIES	112	ARSB (ENSNVIG00000002402) #36	LHPL2 (ENSNVIG00000002454) #34	SCAMP1 (ENSNVIG00000002476) #33	AP3B1 (ENSNVIG00000002504) #31	ENSNVIG00000002585	TBCA (ENSNVIG00000002606) #30	OTP (ENSNVIG00000002637) #29	WDR41 (ENSNVIG00000002651) #28	ENSNVIG00000002723 #27	ZBED3 (ENSNVIG00000002773) #26	AGGF1 (ENSNVIG00000002783) #25	CRHBP (ENSNVIG00000002829) #24	F2RL1 (ENSNVIG00000002854) #22	F2R (ENSNVIG00000002863) #21	IQGAP2 (ENSNVIG00000002874) #20	PAR3 (ENSNVIG00000003032) #19	SV2C (ENSNVIG00000003066) #18
Ferret	MODERN SPECIES	286	LHFPL2 (ENSMPUG00000005146) #34	SCAMP1 (ENSMPUG00000005152) #33	AP3B1 (ENSMPUG00000005160) #31	ENSMPUG00000005174	ENSMPUG00000018799	ENSMPUG00000005179	OTP (ENSMPUG00000005191) #29	ENSMPUG00000018800	WDR41 (ENSMPUG00000005197) #28	PDE8B (ENSMPUG00000005262) #27	AGGF1 (ENSMPUG00000005518) #25	CRHBP (ENSMPUG00000005538) #24	F2RL1 (ENSMPUG00000005551) #22	F2R (ENSMPUG00000005558) #21	IQGAP2 (ENSMPUG00000005569) #20	F2RL2 (ENSMPUG00000005597) #19	SV2C (ENSMPUG00000005606) #18	POC5 (ENSMPUG00000005619) #16	ANKDD1B (ENSMPUG00000005630) #15	POLK (ENSMPUG00000005641) #14	CERT1 (ENSMPUG00000005653) #13	HMGCR (ENSMPUG00000005662) #12	ENSMPUG00000005678 #11	ENSMPUG00000005681 #11	GCNT4 (ENSMPUG00000018801) #10	GFM2 (ENSMPUG00000005688)	FAM169A (ENSMPUG00000005788) #9	ENSMPUG00000005795 #7	HEXB (ENSMPUG00000005816)	ENC1 (ENSMPUG00000018802)	ENSMPUG00000018804
Canidae	ANCESTRAL SPECIES	52	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000165518	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT01090000260011.A.c.a.a.a.a	ENSGT01090000260006.A.c.b.a	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.a.b.a.l	ENSGT01090000260006.A.c.a.b.b	ENSGT01090000260006.A.c.a.a.a.b.b.f	ENSGT01090000260006.A.c.a.a.a.a.a.a.b.b
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000162210.m.b	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00490000043329.a.a.a.pb.b.a.a	ENSGT00950000182940.b.b #18	ENSGT00940000165518	ENSGT00390000004454 #16	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT01090000260011.A.c.a.a.a.a	ENSGT01090000260006.A.c.b.a	ENSGT01090000260006.A.c.b.b.k	ENSGT01090000260006.A.c.a.a.a.b.b.e	ENSGT01090000260006.A.c.a.a.a.a.a.a.b.b	ENSGT01090000260006.A.c.a.a.a.b.b.f
Dingo	MODERN SPECIES	138	ENSCAFG00020026273	ENSCAFG00020026272	ENSCAFG00020026271	LHFPL2 (ENSCAFG00020026266) #34	SCAMP1 (ENSCAFG00020026258) #33	AP3B1 (ENSCAFG00020026199) #31	TBCA (ENSCAFG00020026187) #30	OTP (ENSCAFG00020026185) #29	WDR41 (ENSCAFG00020026182) #28	PDE8B (ENSCAFG00020026022) #27	ENSCAFG00020025990 #26	AGGF1 (ENSCAFG00020025988) #25	CRHBP (ENSCAFG00020025980) #24	F2RL1 (ENSCAFG00020025974) #22	F2R (ENSCAFG00020025967) #21	F2RL2 (ENSCAFG00020025959) #19	ENSCAFG00020025957	IQGAP2 (ENSCAFG00020025766) #20	SV2C (ENSCAFG00020025712) #18	ENSCAFG00020025705	POC5 (ENSCAFG00020025700) #16	POLK (ENSCAFG00020025589) #14	CERT1 (ENSCAFG00020025372) #13	HMGCR (ENSCAFG00020024948) #12	ENSCAFG00020024915	ENSCAFG00020024911 #11	GCNT4 (ENSCAFG00020024910) #10	ENSCAFG00020024905	ENSCAFG00020024903	ENSCAFG00020024901	ENSCAFG00020024897
Dog	MODERN SPECIES	22	ENSCAFG00845007955	ENSCAFG00845008040 #34	SCAMP1 (ENSCAFG00845008131) #33	ENSCAFG00845008191	AP3B1 (ENSCAFG00845008344) #31	TBCA (ENSCAFG00845008735) #30	OTP (ENSCAFG00845008819) #29	WDR41 (ENSCAFG00845008881) #28	PDE8B (ENSCAFG00845009245) #27	ZBED3 (ENSCAFG00845009893) #26	AGGF1 (ENSCAFG00845010001) #25	CRHBP (ENSCAFG00845010170) #24	F2RL1 (ENSCAFG00845010229) #22	F2R (ENSCAFG00845010276) #21	IQGAP2 (ENSCAFG00845010426) #20	F2RL2 (ENSCAFG00845010868) #19	ENSCAFG00845010892	SV2C (ENSCAFG00845010918) #18	ENSCAFG00845010968	POC5 (ENSCAFG00845011018) #16	POLK (ENSCAFG00845011326) #14	CERT1 (ENSCAFG00845011641) #13	HMGCR (ENSCAFG00845011849) #12	ENSCAFG00845012043	ENSCAFG00845012365 #10	OR6C63 (ENSCAFG00845012396)	OR6C85 (ENSCAFG00845012411)	OR6C1K (ENSCAFG00845012419)	ENSCAFG00845012430	OR6C2G (ENSCAFG00845012459)	ENSCAFG00845012478
Red fox	MODERN SPECIES	27	BHMT2 (ENSVVUG00000025018)	BHMT (ENSVVUG00000025022)	ENSVVUG00000025030	LHFPL2 (ENSVVUG00000025039) #34	SCAMP1 (ENSVVUG00000025046) #33	AP3B1 (ENSVVUG00000025056) #31	ENSVVUG00000025093	OTP (ENSVVUG00000025094) #29	WDR41 (ENSVVUG00000025096) #28	PDE8B (ENSVVUG00000025106) #27	AGGF1 (ENSVVUG00000025114) #25	CRHBP (ENSVVUG00000025121) #24	F2RL1 (ENSVVUG00000025124) #22	F2R (ENSVVUG00000025128) #21	IQGAP2 (ENSVVUG00000025132) #20	F2RL2 (ENSVVUG00000025145) #19	ENSVVUG00000025148	SV2C (ENSVVUG00000025157) #18	ENSVVUG00000025163	ENSVVUG00000025164	POC5 (ENSVVUG00000025166) #16	POLK (ENSVVUG00000025177) #14	COL4A3BP (ENSVVUG00000025182) #13	HMGCR (ENSVVUG00000025191) #12	ANKRD31 (ENSVVUG00000025202)	ENSVVUG00000025226	GCNT4 (ENSVVUG00000025231) #10	ENSVVUG00000025234	ENSVVUG00000025235	ENSVVUG00000025236	ENSVVUG00000025237
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000003115.j #17	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000003115.j #17	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00900000143472 #8	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00390000009443.j #35	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000003115.j #17	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00900000143472 #8	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a
lion	MODERN SPECIES		ENSPLOG00000000818 #35	LHFPL2 (ENSPLOG00000000832) #34	SCAMP1 (ENSPLOG00000000849) #33	AP3B1 (ENSPLOG00000000902) #31	TBCA (ENSPLOG00000001046) #30	OTP (ENSPLOG00000001071) #29	WDR41 (ENSPLOG00000001110) #28	PDE8B (ENSPLOG00000001335) #27	ZBED3 (ENSPLOG00000001610) #26	AGGF1 (ENSPLOG00000001638) #25	CRHBP (ENSPLOG00000001686) #24	S100Z (ENSPLOG00000001701) #23	F2RL1 (ENSPLOG00000001714) #22	F2R (ENSPLOG00000001727) #21	IQGAP2 (ENSPLOG00000001777) #20	F2RL2 (ENSPLOG00000001850) #19	SV2C (ENSPLOG00000001869) #18	ENSPLOG00000001913	POC5 (ENSPLOG00000001946) #16	ANKDD1B (ENSPLOG00000002011) #15	POLK (ENSPLOG00000002076) #14	CERT1 (ENSPLOG00000002211) #13	HMGCR (ENSPLOG00000002361) #12	ENSPLOG00000002411	ENSPLOG00000002438 #11	GCNT4 (ENSPLOG00000002455) #10	ENSPLOG00000002461	FAM169A (ENSPLOG00000002487) #9	ENSPLOG00000002537 #8	ENSPLOG00000002554 #7	GFM2 (ENSPLOG00000002587)
leopard	MODERN SPECIES	40	LHFPL2 (ENSPPRG00000000681) #34	SCAMP1 (ENSPPRG00000000330) #33	ENSPPRG00000020501 #32	AP3B1 (ENSPPRG00000019993) #31	TBCA (ENSPPRG00000018237) #30	OTP (ENSPPRG00000015334) #29	WDR41 (ENSPPRG00000015058) #28	PDE8B (ENSPPRG00000012726) #27	ZBED3 (ENSPPRG00000017742) #26	AGGF1 (ENSPPRG00000004438) #25	CRHBP (ENSPPRG00000002387) #24	S100Z (ENSPPRG00000002129) #23	F2RL1 (ENSPPRG00000001778) #22	F2R (ENSPPRG00000001748) #21	IQGAP2 (ENSPPRG00000001278) #20	F2RL2 (ENSPPRG00000024088) #19	SV2C (ENSPPRG00000024498) #18	ENSPPRG00000021813 #17	POC5 (ENSPPRG00000017915) #16	ANKDD1B (ENSPPRG00000013528) #15	POLK (ENSPPRG00000012504) #14	CERT1 (ENSPPRG00000009941) #13	HMGCR (ENSPPRG00000008332) #12	ENSPPRG00000006600 #11	GCNT4 (ENSPPRG00000017075) #10	FAM169A (ENSPPRG00000005349) #9	ENSPPRG00000004205 #8	ENSPPRG00000003110 #7	GFM2 (ENSPPRG00000002671)	HEXB (ENSPPRG00000016405)	ENC1 (ENSPPRG00000016411)
Tiger	MODERN SPECIES	134	DMGDH (ENSPTIG00000021430) #37	ARSB (ENSPTIG00000003156) #36	LHFPL2 (ENSPTIG00000006957) #34	SCAMP1 (ENSPTIG00000007335) #33	AP3B1 (ENSPTIG00000008485) #31	TBCA (ENSPTIG00000009506) #30	OTP (ENSPTIG00000011169) #29	WDR41 (ENSPTIG00000011923) #28	PDE8B (ENSPTIG00000014747) #27	AGGF1 (ENSPTIG00000021519) #25	CRHBP (ENSPTIG00000021691) #24	S100Z (ENSPTIG00000021832) #23	F2RL1 (ENSPTIG00000021859) #22	F2R (ENSPTIG00000021894) #21	IQGAP2 (ENSPTIG00000021975) #20	F2RL2 (ENSPTIG00000009666) #19	SV2C (ENSPTIG00000010098) #18	POC5 (ENSPTIG00000011856) #16	ANKDD1B (ENSPTIG00000013441) #15	POLK (ENSPTIG00000014864) #14	CERT1 (ENSPTIG00000016589) #13	HMGCR (ENSPTIG00000018612) #12	ENSPTIG00000019989 #11	GCNT4 (ENSPTIG00000005529) #10	FAM169A (ENSPTIG00000020456) #9	ENSPTIG00000005537 #8	ENSPTIG00000021404 #7	GFM2 (ENSPTIG00000021698)	HEXB (ENSPTIG00000006120)	ENC1 (ENSPTIG00000005574)	ARHGEF28 (ENSPTIG00000008258)
Cat	MODERN SPECIES		BHMT (ENSFCAG00000040239)	DMGDH (ENSFCAG00000011882) #37	ENSFCAG00000035649	ARSB (ENSFCAG00000033754) #36	SCAMP1 (ENSFCAG00000007805) #33	AP3B1 (ENSFCAG00000030762) #31	TBCA (ENSFCAG00000026107) #30	OTP (ENSFCAG00000032267) #29	WDR41 (ENSFCAG00000026146) #28	PDE8B (ENSFCAG00000005432) #27	ZBED3 (ENSFCAG00000044339) #26	AGGF1 (ENSFCAG00000018724) #25	CRHBP (ENSFCAG00000023090) #24	S100Z (ENSFCAG00000044986) #23	F2R (ENSFCAG00000003325) #21	F2RL2 (ENSFCAG00000040850) #19	IQGAP2 (ENSFCAG00000003323) #20	SV2C (ENSFCAG00000003321) #18	ENSFCAG00000048312 #17	POC5 (ENSFCAG00000009661) #16	ANKDD1B (ENSFCAG00000009659) #15	POLK (ENSFCAG00000001614) #14	CERT1 (ENSFCAG00000031307) #13	HMGCR (ENSFCAG00000000007) #12	ENSFCAG00000029332 #11	GCNT4 (ENSFCAG00000010125) #10	FAM169A (ENSFCAG00000031781) #9	ENSFCAG00000011978 #7	GFM2 (ENSFCAG00000011977)	HEXB (ENSFCAG00000018403)	ARHGEF28 (ENSFCAG00000013540)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Microbat	MODERN SPECIES	937	BHMT2 (ENSMLUG00000009152)	DMGDH (ENSMLUG00000009128) #37	ARSB (ENSMLUG00000001949) #36	LHFPL2 (ENSMLUG00000006700) #34	SCAMP1 (ENSMLUG00000006679) #33	AP3B1 (ENSMLUG00000006637) #31	TBCA (ENSMLUG00000001087) #30	OTP (ENSMLUG00000028781) #29	WDR41 (ENSMLUG00000016814) #28	PDE8B (ENSMLUG00000016798) #27	AGGF1 (ENSMLUG00000016792) #25	CRHBP (ENSMLUG00000025557) #24	ENSMLUG00000006790	F2R (ENSMLUG00000029641) #21	IQGAP2 (ENSMLUG00000006695) #20	F2RL2 (ENSMLUG00000006767) #19	SV2C (ENSMLUG00000006658) #18	POC5 (ENSMLUG00000015701) #16	ANKDD1B (ENSMLUG00000015695) #15	POLK (ENSMLUG00000015681) #14	CERT1 (ENSMLUG00000004251) #13	HMGCR (ENSMLUG00000004238) #12	GCNT4 (ENSMLUG00000003938) #10	FAM169A (ENSMLUG00000014466) #9	ENSMLUG00000014464 #7	GFM2 (ENSMLUG00000004761)	HEXB (ENSMLUG00000004748)	ENC1 (ENSMLUG00000004745)	ARHGEF28 (ENSMLUG00000004723)	UTP15 (ENSMLUG00000008483)	ANKRA2 (ENSMLUG00000008459)
Greater horseshoe bat	MODERN SPECIES	25	LHFPL2 (ENSRFEG00010018294) #34	SCAMP1 (ENSRFEG00010018228) #33	ENSRFEG00010018181	ENSRFEG00010018153	AP3B1 (ENSRFEG00010018051) #31	TBCA (ENSRFEG00010017900) #30	OTP (ENSRFEG00010017860) #29	WDR41 (ENSRFEG00010017690) #28	PDE8B (ENSRFEG00010016179) #27	ZBED3 (ENSRFEG00010016086) #26	AGGF1 (ENSRFEG00010016035) #25	S100Z (ENSRFEG00010015950) #23	CRHBP (ENSRFEG00010015859) #24	F2RL1 (ENSRFEG00010015917) #22	F2R (ENSRFEG00010015825) #21	F2RL2 (ENSRFEG00010015786) #19	IQGAP2 (ENSRFEG00010014371) #20	SV2C (ENSRFEG00010014249) #18	POC5 (ENSRFEG00010014089) #16	ANKDD1B (ENSRFEG00010013842) #15	POLK (ENSRFEG00010013650) #14	CERT1 (ENSRFEG00010013140) #13	HMGCR (ENSRFEG00010013017) #12	ANKRD31 (ENSRFEG00010012703) #11	GCNT4 (ENSRFEG00010012676) #10	FAM169A (ENSRFEG00010012573) #9	ENSRFEG00010012400 #7	GFM2 (ENSRFEG00010012225)	HEXB (ENSRFEG00010012089)	ENC1 (ENSRFEG00010012008)	ARHGEF28 (ENSRFEG00010010905)
Megabat	MODERN SPECIES	259											AGGF1 (ENSPVAG00000009733) #25	CRHBP (ENSPVAG00000009732) #24	S100Z (ENSPVAG00000009731) #23	F2RL1 (ENSPVAG00000009729) #22	F2R (ENSPVAG00000009728) #21	F2RL2 (ENSPVAG00000009726) #19	IQGAP2 (ENSPVAG00000009723) #20	SV2C (ENSPVAG00000009721) #18
Equus	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Donkey	MODERN SPECIES	29	LHFPL2 (ENSEASG00005001904) #34	SCAMP1 (ENSEASG00005001900) #33	AP3B1 (ENSEASG00005001889) #31	ENSEASG00005028729 #30	ENSEASG00005032921	OTP (ENSEASG00005001863) #29	WDR41 (ENSEASG00005001862) #28	PDE8B (ENSEASG00005001845) #27	ZBED3 (ENSEASG00005034455) #26	AGGF1 (ENSEASG00005001829) #25	CRHBP (ENSEASG00005001822) #24	S100Z (ENSEASG00005001816) #23	F2RL1 (ENSEASG00005001812) #22	F2R (ENSEASG00005037330) #21	IQGAP2 (ENSEASG00005000244) #20	F2RL2 (ENSEASG00005036850) #19	SV2C (ENSEASG00005018455) #18	POC5 (ENSEASG00005018452) #16	ANKDD1B (ENSEASG00005035528) #15	POLK (ENSEASG00005018442) #14	CERT1 (ENSEASG00005018435) #13	HMGCR (ENSEASG00005018428) #12	ANKRD31 (ENSEASG00005018424) #11	GCNT4 (ENSEASG00005037231) #10	FAM169A (ENSEASG00005018417) #9	ENSEASG00005018414 #7	GFM2 (ENSEASG00005018285)	HEXB (ENSEASG00005018246)	ENC1 (ENSEASG00005028078)	ARHGEF28 (ENSEASG00005018167)	UTP15 (ENSEASG00005018111)
Horse	MODERN SPECIES	5	BHMT2 (ENSECAG00000018440)	ARSB (ENSECAG00000020847) #36	LHFPL2 (ENSECAG00000021890) #34	SCAMP1 (ENSECAG00000021921) #33	AP3B1 (ENSECAG00000022849) #31	TBCA (ENSECAG00000009383) #30	OTP (ENSECAG00000009423) #29	WDR41 (ENSECAG00000009496) #28	PDE8B (ENSECAG00000012189) #27	ZBED3 (ENSECAG00000040464) #26	CRHBP (ENSECAG00000017949) #24	F2R (ENSECAG00000004055) #21	S100Z (ENSECAG00000000977) #23	F2RL1 (ENSECAG00000002867) #22	IQGAP2 (ENSECAG00000004274) #20	F2RL2 (ENSECAG00000010531) #19	SV2C (ENSECAG00000010569) #18	POC5 (ENSECAG00000013824) #16	ANKDD1B (ENSECAG00000014521) #15	POLK (ENSECAG00000014876) #14	CERT1 (ENSECAG00000017349) #13	HMGCR (ENSECAG00000021330) #12	ANKRD31 (ENSECAG00000024123) #11	GCNT4 (ENSECAG00000005515) #10	FAM169A (ENSECAG00000024132) #9	NSA2 (ENSECAG00000005528) #7	GFM2 (ENSECAG00000006640)	HEXB (ENSECAG00000011657)	ENC1 (ENSECAG00000016706)	ENSECAG00000048479	ARHGEF28 (ENSECAG00000017689)
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Primates	ANCESTRAL SPECIES	8	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Tarsier	MODERN SPECIES	1372															IQGAP2 (ENSTSYG00000009628) #20	F2RL2 (ENSTSYG00000009670) #19
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710.p.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Hominidae	ANCESTRAL SPECIES	7	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710.p.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.p.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545.a	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.p.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164545.a	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a
Pan	ANCESTRAL SPECIES	21	ENSGT00940000157603 #31	ENSGT00390000009710.p.b #30	ENSGT00940000159952 #29	ENSGT00950000182878.b.a.c.a.a.b.i.b	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164545.a	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a
Bonobo	MODERN SPECIES	18	AP3B1 (ENSPPAG00000038854) #31	ENSPPAG00000044127	TBCA (ENSPPAG00000037014) #30	OTP (ENSPPAG00000042915) #29	WDR41 (ENSPPAG00000036126) #28	ENSPPAG00000035224	PDE8B (ENSPPAG00000037153) #27	ENSPPAG00000042326	ENSPPAG00000015926	AGGF1 (ENSPPAG00000035969) #25	CRHBP (ENSPPAG00000041280) #24	S100Z (ENSPPAG00000038063) #23	F2RL1 (ENSPPAG00000023823) #22	F2R (ENSPPAG00000034950) #21	IQGAP2 (ENSPPAG00000029477) #20	F2RL2 (ENSPPAG00000036549) #19	SV2C (ENSPPAG00000042256) #18	ENSPPAG00000038410	ENSPPAG00000035826	POC5 (ENSPPAG00000037734) #16	ANKDD1B (ENSPPAG00000039465) #15	POLK (ENSPPAG00000026238) #14	CERT1 (ENSPPAG00000042589) #13	HMGCR (ENSPPAG00000034707) #12	ANKRD31 (ENSPPAG00000033501) #11	ENSPPAG00000035800	ENSPPAG00000041224	FAM169A (ENSPPAG00000042903) #9	ENSPPAG00000040994	NSA2 (ENSPPAG00000042622) ##7	GFM2 (ENSPPAG00000036359)
Chimpanzee	MODERN SPECIES	18	AP3B1 (ENSPTRG00000017015) #31	TBCA (ENSPTRG00000017013) #30	OTP (ENSPTRG00000017012) #29	ENSPTRG00000023613	WDR41 (ENSPTRG00000017011) #28	PDE8B (ENSPTRG00000017010) #27	ENSPTRG00000042930	ENSPTRG00000046179	ZBED3 (ENSPTRG00000050050) #26	AGGF1 (ENSPTRG00000017008) #25	CRHBP (ENSPTRG00000017007) #24	S100Z (ENSPTRG00000017006) #23	F2RL1 (ENSPTRG00000017005) #22	F2R (ENSPTRG00000017004) #21	IQGAP2 (ENSPTRG00000017002) #20	F2RL2 (ENSPTRG00000017003) #19	ENSPTRG00000046035	SV2C (ENSPTRG00000017000) #18	ENSPTRG00000044990	ENSPTRG00000051331	POC5 (ENSPTRG00000016999) #16	ANKDD1B (ENSPTRG00000016998) #15	POLK (ENSPTRG00000016997) #14	CERT1 (ENSPTRG00000016996) #13	HMGCR (ENSPTRG00000016994) #12	ANKRD31 (ENSPTRG00000016993) #11	GCNT4 (ENSPTRG00000040943) #10	ENSPTRG00000044567	FAM169A (ENSPTRG00000016991) #9	ENSPTRG00000051667	NSA2 (ENSPTRG00000016990) ##7
Human	MODERN SPECIES	17	ARSB (ENSG00000113273) #36	LHFPL2 (ENSG00000145685) #34	SCAMP1 (ENSG00000085365) #33	AP3B1 (ENSG00000132842) #31	TBCA (ENSG00000171530) #30	OTP (ENSG00000171540) #29	WDR41 (ENSG00000164253) #28	PDE8B (ENSG00000113231) #27	ENSG00000284762	ZBED3 (ENSG00000132846) #26	AGGF1 (ENSG00000164252) #25	CRHBP (ENSG00000145708) #24	S100Z (ENSG00000171643) #23	F2RL1 (ENSG00000164251) #22	F2R (ENSG00000181104) #21	F2RL2 (ENSG00000164220) #19	IQGAP2 (ENSG00000145703) #20	SV2C (ENSG00000122012) #18	POC5 (ENSG00000152359) #16	ANKDD1B (ENSG00000189045) #15	POLK (ENSG00000122008) #14	CERT1 (ENSG00000113163) #13	HMGCR (ENSG00000113161) #12	ANKRD31 (ENSG00000145700) #11	GCNT4 (ENSG00000176928) #10	FAM169A (ENSG00000198780) #9	NSA2 (ENSG00000164346) ##7	GFM2 (ENSG00000164347)	HEXB (ENSG00000049860)	ENC1 (ENSG00000171617)	ARHGEF28 (ENSG00000214944)
Gorilla	MODERN SPECIES	8	ENSGGOG00000027597	ENSGGOG00000023547 #30	OTP (ENSGGOG00000015687) #29	ENSGGOG00000027406	WDR41 (ENSGGOG00000026798) #28	PDE8B (ENSGGOG00000005317) #27	ENSGGOG00000039702	ENSGGOG00000037102	ZBED3 (ENSGGOG00000002896) #26	AGGF1 (ENSGGOG00000010269) #25	CRHBP (ENSGGOG00000011139) #24	S100Z (ENSGGOG00000025895) #23	F2RL1 (ENSGGOG00000007078) #22	F2R (ENSGGOG00000010442) #21	IQGAP2 (ENSGGOG00000014696) #20	F2RL2 (ENSGGOG00000011789) #19	SV2C (ENSGGOG00000007723) #18	ENSGGOG00000039209	ENSGGOG00000042268	ENSGGOG00000039885	POC5 (ENSGGOG00000015106) #16	ENSGGOG00000015099 #15	POLK (ENSGGOG00000015644) #14	CERT1 (ENSGGOG00000005049) #13	HMGCR (ENSGGOG00000010919) #12	ANKRD31 (ENSGGOG00000017052) #11	GCNT4 (ENSGGOG00000027775) #10	ENSGGOG00000023345	ENSGGOG00000041097	ENSGGOG00000040312	FAM169A (ENSGGOG00000003620) #9
Orangutan	MODERN SPECIES	18	LHFPL2 (ENSPPYG00000015582) #34	SCAMP1 (ENSPPYG00000015581) #33	AP3B1 (ENSPPYG00000015580) #31	ENSPPYG00000040806	TBCA (ENSPPYG00000015579) #30	OTP (ENSPPYG00000015578) #29	WDR41 (ENSPPYG00000015577) #28	ENSPPYG00000030861	PDE8B (ENSPPYG00000015576) #27	ZBED3 (ENSPPYG00000015575) #26	AGGF1 (ENSPPYG00000015574) #25	CRHBP (ENSPPYG00000015573) #24	S100Z (ENSPPYG00000015572) #23	F2RL1 (ENSPPYG00000041489) #22	F2R (ENSPPYG00000015570) #21	F2RL2 (ENSPPYG00000015569) #19	IQGAP2 (ENSPPYG00000015568) #20	SV2C (ENSPPYG00000015566) #18	ENSPPYG00000015565	POC5 (ENSPPYG00000015564) #16	ANKDD1B (ENSPPYG00000015563) #15	POLK (ENSPPYG00000015562) #14	CERT1 (ENSPPYG00000015561) #13	HMGCR (ENSPPYG00000015560) #12	ANKRD31 (ENSPPYG00000015559) #11	GCNT4 (ENSPPYG00000015558) #10	ENSPPYG00000029971	FAM169A (ENSPPYG00000015557) #9	NSA2 (ENSPPYG00000025926) ##7	GFM2 (ENSPPYG00000015556)	HEXB (ENSPPYG00000029577)
Gibbon	MODERN SPECIES	11	LHFPL2 (ENSNLEG00000035509) #34	SCAMP1 (ENSNLEG00000029924) #33	AP3B1 (ENSNLEG00000012740) #31	ENSNLEG00000012739	TBCA (ENSNLEG00000012734) #30	OTP (ENSNLEG00000012728) #29	WDR41 (ENSNLEG00000012712) #28	ENSNLEG00000028936	PDE8B (ENSNLEG00000012655) #27	AGGF1 (ENSNLEG00000026907) #25	CRHBP (ENSNLEG00000012627) #24	S100Z (ENSNLEG00000012623) #23	ENSNLEG00000031332	F2RL1 (ENSNLEG00000012622) #22	F2R (ENSNLEG00000012619) #21	F2RL2 (ENSNLEG00000012616) #19	IQGAP2 (ENSNLEG00000012573) #20	GDE1 (ENSNLEG00000012560)	CCP110 (ENSNLEG00000012522)	VPS35L (ENSNLEG00000012499)	KNOP1 (ENSNLEG00000012496)	IQCK (ENSNLEG00000034248)	GPRC5B (ENSNLEG00000012461)	GPR139 (ENSNLEG00000012460)	GP2 (ENSNLEG00000012434)	UMOD (ENSNLEG00000012413)	PDILT (ENSNLEG00000012398)	ACSM5 (ENSNLEG00000012394)	ENSNLEG00000012375	THUMPD1 (ENSNLEG00000012369)	ACSM3 (ENSNLEG00000012361)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000157603 #31	ENSGT00390000009710.k.a #30	ENSGT01050000246247	ENSGT00390000009710.l #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.k.a #30	ENSGT01050000246247	ENSGT00390000009710.l #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00730000110997.k.b.a	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000157310 #33	ENSGT00940000161627.a.a.a.a.a.a.a.b	ENSGT00940000157603 #31	ENSGT00390000009710.k.a #30	ENSGT01050000246247	ENSGT00390000009710.l #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00900000143509	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000245467.b.a.b	ENSGT00730000110997.k.b.a	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a
Crab-eating macaque	MODERN SPECIES	16	SCAMP1 (ENSMFAG00000037897) #33	ENSMFAG00000056484	AP3B1 (ENSMFAG00000040032) #31	ENSMFAG00000057074	TBCA (ENSMFAG00000034059) #30	OTP (ENSMFAG00000056050) #29	WDR41 (ENSMFAG00000002206) #28	ENSMFAG00000040282	PDE8B (ENSMFAG00000041903) #27	ENSMFAG00000063877	ZBED3 (ENSMFAG00000065084) #26	AGGF1 (ENSMFAG00000038062) #25	CRHBP (ENSMFAG00000041775) #24	F2RL1 (ENSMFAG00000037697) #22	F2R (ENSMFAG00000044734) #21	F2RL2 (ENSMFAG00000045908) #19	ENSMFAG00000059937	IQGAP2 (ENSMFAG00000032362) #20	ENSMFAG00000048479	ENSMFAG00000000588	SV2C (ENSMFAG00000036123) #18	POLK (ENSMFAG00000043179) #14	CERT1 (ENSMFAG00000030820) #13	HMGCR (ENSMFAG00000036118) #12	ANKRD31 (ENSMFAG00000044070) #11	GCNT4 (ENSMFAG00000005546) #10	FAM169A (ENSMFAG00000001548) #9	NSA2 (ENSMFAG00000038283) ##7	GFM2 (ENSMFAG00000039713)	HEXB (ENSMFAG00000003959)	ENC1 (ENSMFAG00000030568)
Rhesus	MODERN SPECIES	16	DMGDH (ENSMMUG00000006795) #37	ARSB (ENSMMUG00000006792) #36	LHFPL2 (ENSMMUG00000016402) #34	SCAMP1 (ENSMMUG00000039925) #33	ENSMMUG00000057268	AP3B1 (ENSMMUG00000001360) #31	ENSMMUG00000053817 #30	OTP (ENSMMUG00000039760) #29	WDR41 (ENSMMUG00000021361) #28	ZBED3 (ENSMMUG00000021357) #26	AGGF1 (ENSMMUG00000021358) #27	CRHBP (ENSMMUG00000021354) #24	ENSMMUG00000050110	F2RL1 (ENSMMUG00000060389) #22	F2R (ENSMMUG00000039522) #21	F2RL2 (ENSMMUG00000022988) #19	IQGAP2 (ENSMMUG00000022982) #20	ENSMMUG00000049361	SV2C (ENSMMUG00000019887) #18	POC5 (ENSMMUG00000006146) #16	ANKDD1B (ENSMMUG00000061069) #15	POLK (ENSMMUG00000006144) #14	CERT1 (ENSMMUG00000006141) #13	HMGCR (ENSMMUG00000006139) #12	ENSMMUG00000054777	GCNT4 (ENSMMUG00000043533) #10	ANKRD31 (ENSMMUG00000011061) #11	FAM169A (ENSMMUG00000011198) #9	NSA2 (ENSMMUG00000011196) ##7	GFM2 (ENSMMUG00000019998)	HEXB (ENSMMUG00000019997)
Pig-tailed macaque	MODERN SPECIES	533	AP3B1 (ENSMNEG00000043246) #31	ENSMNEG00000041744	ENSMNEG00000004983	ENSMNEG00000044207 #30	OTP (ENSMNEG00000033198) #29	WDR41 (ENSMNEG00000020110) #28	PDE8B (ENSMNEG00000045435) #27	ENSMNEG00000042545	ENSMNEG00000036640	AGGF1 (ENSMNEG00000044235) #25	CRHBP (ENSMNEG00000039318) #24	F2RL1 (ENSMNEG00000038661) #22	F2R (ENSMNEG00000039945) #21	ENSMNEG00000036523	IQGAP2 (ENSMNEG00000039584) #20	F2RL2 (ENSMNEG00000028529) #19	SV2C (ENSMNEG00000043938) #18	ENSMNEG00000035234	ENSMNEG00000039274	ENSMNEG00000029783	POC5 (ENSMNEG00000028970) #16	ENSMNEG00000041053 ##32	ANKDD1B (ENSMNEG00000040050) #15	POLK (ENSMNEG00000016543) #14	ENSMNEG00000012143	CERT1 (ENSMNEG00000034301) #13	HMGCR (ENSMNEG00000036782) #12	ANKRD31 (ENSMNEG00000038747) #11	ENSMNEG00000019915	FAM169A (ENSMNEG00000032139) #9	ENSMNEG00000031805
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710.l #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b	ENSGT00390000018706.m.b.a ##7
Olive baboon	MODERN SPECIES	15	ARSB (ENSPANG00000023320) #36	LHFPL2 (ENSPANG00000006610) #34	SCAMP1 (ENSPANG00000004375) #33	ENSPANG00000050549	AP3B1 (ENSPANG00000023495) #31	TBCA (ENSPANG00000021931) #30	OTP (ENSPANG00000009550) #29	WDR41 (ENSPANG00000011629) #28	PDE8B (ENSPANG00000025090) #27	ZBED3 (ENSPANG00000038596) #26	AGGF1 (ENSPANG00000026423) #25	CRHBP (ENSPANG00000010788) #24	F2RL1 (ENSPANG00000003861) #22	ENSPANG00000037268	F2R (ENSPANG00000013598) #21	F2RL2 (ENSPANG00000011810) #19	ENSPANG00000037698	IQGAP2 (ENSPANG00000004269) #20	ENSPANG00000018228	ENSPANG00000044335	SV2C (ENSPANG00000014041) #18	ENSPANG00000044389	ENSPANG00000046931	POC5 (ENSPANG00000013599) #16	ANKDD1B (ENSPANG00000009551) #15	ENSPANG00000038550	POLK (ENSPANG00000000060) #14	CERT1 (ENSPANG00000000059) #13	HMGCR (ENSPANG00000001531) #12	ENSPANG00000003862 #11	ENSPANG00000010937 #10
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT01050000246247	ENSGT00390000009710.l #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454 #16	ENSGT00390000005569.x.a.b.b.a.a ##32	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00390000005534.b.b.c.a	ENSGT00510000048902.a #9	ENSGT00950000183183.b.a.y.a.a.b
Sooty mangabey	MODERN SPECIES	296	LHFPL2 (ENSCATG00000035958) #34	SCAMP1 (ENSCATG00000044496) #33	AP3B1 (ENSCATG00000038017) #31	ENSCATG00000017219	ENSCATG00000034024 #30	OTP (ENSCATG00000032638) #29	WDR41 (ENSCATG00000041825) #28	PDE8B (ENSCATG00000037786) #27	ENSCATG00000030461	AGGF1 (ENSCATG00000041518) #25	CRHBP (ENSCATG00000033058) #24	F2RL1 (ENSCATG00000032504) #22	F2R (ENSCATG00000004708) #21	ENSCATG00000044545	IQGAP2 (ENSCATG00000029179) #20	F2RL2 (ENSCATG00000035572) #19	SV2C (ENSCATG00000036443) #18	ENSCATG00000039111	ENSCATG00000004582	ENSCATG00000038048	ENSCATG00000033028	POC5 (ENSCATG00000044188) #16	ENSCATG00000039793 ##32	ANKDD1B (ENSCATG00000040088) #15	POLK (ENSCATG00000014199) #14	ENSCATG00000019819	CERT1 (ENSCATG00000037646) #13	HMGCR (ENSCATG00000014646) #12	ANKRD31 (ENSCATG00000029258) #11	GCNT4 (ENSCATG00000016075) #10	ENSCATG00000041782
Drill	MODERN SPECIES	197		AP3B1 (ENSMLEG00000031960) #31	ENSMLEG00000025761	TBCA (ENSMLEG00000021010) #30	OTP (ENSMLEG00000035311) #29	WDR41 (ENSMLEG00000039709) #28	PDE8B (ENSMLEG00000040085) #27	ENSMLEG00000040040	AGGF1 (ENSMLEG00000031926) #25	CRHBP (ENSMLEG00000033854) #24	F2RL1 (ENSMLEG00000032188) #22	F2R (ENSMLEG00000034077) #21	ENSMLEG00000032992	ENSMLEG00000019477	IQGAP2 (ENSMLEG00000027862) #20	F2RL2 (ENSMLEG00000021660) #19	ENSMLEG00000040224	SV2C (ENSMLEG00000000294) #18	ENSMLEG00000040235	ENSMLEG00000039763	POC5 (ENSMLEG00000039781) #16	ENSMLEG00000031391 ##32	ANKDD1B (ENSMLEG00000029848) #15	POLK (ENSMLEG00000042768) #14	ENSMLEG00000006839	CERT1 (ENSMLEG00000042639) #13	HMGCR (ENSMLEG00000030530) #12	ANKRD31 (ENSMLEG00000037468) #11	GCNT4 (ENSMLEG00000027356) #10	ENSMLEG00000038467	ENSMLEG00000013497
Vervet Monkey	MODERN SPECIES	23	ARSB (ENSCSAG00000015262) #36	LHFPL2 (ENSCSAG00000015267) #34	ENSCSAG00000019418	SCAMP1 (ENSCSAG00000015275) #33	AP3B1 (ENSCSAG00000015290) #31	ENSCSAG00000015299	OTP (ENSCSAG00000015302) #29	WDR41 (ENSCSAG00000015310) #28	PDE8B (ENSCSAG00000015317) #27	ZBED3 (ENSCSAG00000019417) #26	AGGF1 (ENSCSAG00000015324) #25	ENSCSAG00000015331	CRHBP (ENSCSAG00000015337) #24	F2RL1 (ENSCSAG00000015342) #22	F2R (ENSCSAG00000015345) #21	F2RL2 (ENSCSAG00000015353) #19	IQGAP2 (ENSCSAG00000015367) #20	SV2C (ENSCSAG00000015376) #18	POC5 (ENSCSAG00000015388) #16	POLK (ENSCSAG00000015397) #14	CERT1 (ENSCSAG00000015407) #13	HMGCR (ENSCSAG00000015420) #12	ENSCSAG00000015425 #11	GCNT4 (ENSCSAG00000019416) #10	FAM169A (ENSCSAG00000015436) #9	ENSCSAG00000015450 ##7	GFM2 (ENSCSAG00000015464)	HEXB (ENSCSAG00000015476)	ENC1 (ENSCSAG00000019415)	ARHGEF28 (ENSCSAG00000015492)	UTP15 (ENSCSAG00000015499)
Rhinopithecus	ANCESTRAL SPECIES	435												ENSGT01050000244840.A.a.a #22	ENSGT01050000246082	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000154690.ub.a	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12
Golden snub-nosed monkey	MODERN SPECIES	2770												F2RL1 (ENSRROG00000032623) #22	ENSRROG00000037429	F2R (ENSRROG00000036126) #21	IQGAP2 (ENSRROG00000034599) #20	F2RL2 (ENSRROG00000038200) #19	SV2C (ENSRROG00000013475) #18	ENSRROG00000040882	ENSRROG00000030072	POC5 (ENSRROG00000042318) #16	ANKDD1B (ENSRROG00000040202) #15	POLK (ENSRROG00000037966) #14	CERT1 (ENSRROG00000029719) #13	HMGCR (ENSRROG00000039933) #12
Black snub-nosed monkey	MODERN SPECIES	1407											ENSRBIG00000017660	ENSRBIG00000029722	F2RL1 (ENSRBIG00000037566) #22	ENSRBIG00000042617	F2R (ENSRBIG00000036891) #21	F2RL2 (ENSRBIG00000019692) #19	IQGAP2 (ENSRBIG00000034318) #20	ENSRBIG00000036353	SV2C (ENSRBIG00000040092) #18	ENSRBIG00000028878	POC5 (ENSRBIG00000041501) #16	ANKDD1B (ENSRBIG00000041604) #15	POLK (ENSRBIG00000037378) #14	CERT1 (ENSRBIG00000043633) #13	HMGCR (ENSRBIG00000037269) #12
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.i.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00390000015047.d.a	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000153335.a.b.w.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a.j ##7	ENSGT00550000074890	ENSGT00390000008107.c.a.i
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.i.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00390000015047.d.a	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000153335.a.b.w.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a.j ##7	ENSGT00550000074890	ENSGT00390000008107.c.a.i
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.i.b #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00900000143509	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00510000047029.z.e	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00390000015047.d.a	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000153335.a.b.w.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a.j ##7	ENSGT00550000074890	ENSGT00390000008107.c.a.i
Capuchin	MODERN SPECIES	50	SCAMP1 (ENSCCAG00000020394) #33	ENSCCAG00000001996	AP3B1 (ENSCCAG00000024221) #31	ENSCCAG00000036687	TBCA (ENSCCAG00000034960) #30	OTP (ENSCCAG00000028580) #29	ENSCCAG00000033428	ENSCCAG00000024360 #28	PDE8B (ENSCCAG00000035315) #27	AGGF1 (ENSCCAG00000023174) #25	CRHBP (ENSCCAG00000017626) #24	ENSCCAG00000027406	S100Z (ENSCCAG00000021575) #23	F2RL1 (ENSCCAG00000020451) #22	F2R (ENSCCAG00000035401) #21	F2RL2 (ENSCCAG00000023100) #19	IQGAP2 (ENSCCAG00000032875) #20	SV2C (ENSCCAG00000036246) #18	ENSCCAG00000030179	POC5 (ENSCCAG00000013495) #16	ANKDD1B (ENSCCAG00000020279) #15	POLK (ENSCCAG00000029021) #14	CERT1 (ENSCCAG00000021594) #13	HMGCR (ENSCCAG00000023164) #12	ENSCCAG00000024833	ANKRD31 (ENSCCAG00000025762) #11	GCNT4 (ENSCCAG00000012660) #10	ENSCCAG00000030843	ENSCCAG00000018354	FAM169A (ENSCCAG00000008188) #9	NSA2 (ENSCCAG00000017188) ##7
Bolivian squirrel monkey	MODERN SPECIES	43	AP3B1 (ENSSBOG00000029511) #31	TBCA (ENSSBOG00000031001) #30	OTP (ENSSBOG00000035833) #29	ENSSBOG00000021924	WDR41 (ENSSBOG00000019142) #28	PDE8B (ENSSBOG00000020456) #27	ENSSBOG00000032840	AGGF1 (ENSSBOG00000019539) #25	CRHBP (ENSSBOG00000024077) #24	ENSSBOG00000013156	S100Z (ENSSBOG00000016013) #23	F2RL1 (ENSSBOG00000028683) #22	ENSSBOG00000027642	F2R (ENSSBOG00000033584) #21	IQGAP2 (ENSSBOG00000020078) #20	F2RL2 (ENSSBOG00000026294) #19	ENSSBOG00000032555	SV2C (ENSSBOG00000034394) #18	ENSSBOG00000028612	POC5 (ENSSBOG00000034084) #16	ANKDD1B (ENSSBOG00000027462) #15	POLK (ENSSBOG00000034732) #14	CERT1 (ENSSBOG00000027229) #13	HMGCR (ENSSBOG00000028283) #12	ENSSBOG00000030051	ANKRD31 (ENSSBOG00000030519) #11	GCNT4 (ENSSBOG00000018505) #10	FAM169A (ENSSBOG00000033264) #9	NSA2 (ENSSBOG00000032829) ##7	GFM2 (ENSSBOG00000021848)	ENSSBOG00000011145
Marmoset	MODERN SPECIES	11	ENSCJAG00000019848 #30	ENSCJAG00000072122	ENSCJAG00000085518	OTP (ENSCJAG00000071567) #29	WDR41 (ENSCJAG00000019853) #28	PDE8B (ENSCJAG00000019876) #27	ZBED3 (ENSCJAG00000019950) #26	AGGF1 (ENSCJAG00000019955) #25	ENSCJAG00000070903	CRHBP (ENSCJAG00000019970) #24	S100Z (ENSCJAG00000081437) #23	F2RL1 (ENSCJAG00000062182) #22	ENSCJAG00000084566	F2R (ENSCJAG00000086495) #21	IQGAP2 (ENSCJAG00000019985) #20	F2RL2 (ENSCJAG00000020029) #19	SV2C (ENSCJAG00000020031) #18	POC5 (ENSCJAG00000017148) #16	ENSCJAG00000071025	ANKDD1B (ENSCJAG00000017129) #15	POLK (ENSCJAG00000017052) #14	CERT1 (ENSCJAG00000017020) #13	HMGCR (ENSCJAG00000016954) #12	ANKRD31 (ENSCJAG00000016943) #11	GCNT4 (ENSCJAG00000016941) #10	FAM169A (ENSCJAG00000016884) #9	NSA2 (ENSCJAG00000016874) ##7	GFM2 (ENSCJAG00000016802)	HEXB (ENSCJAG00000016664)	ARHGEF28 (ENSCJAG00000016645)	ENSCJAG00000083910
Mas night monkey	MODERN SPECIES	670	ARSB (ENSANAG00000028965) #36	LHFPL2 (ENSANAG00000021404) #34	SCAMP1 (ENSANAG00000023081) #33	ENSANAG00000036326	AP3B1 (ENSANAG00000035703) #31	ENSANAG00000035527 #30	OTP (ENSANAG00000029433) #29	WDR41 (ENSANAG00000004152) #28	PDE8B (ENSANAG00000031594) #27	AGGF1 (ENSANAG00000023021) #25	CRHBP (ENSANAG00000022343) #24	ENSANAG00000028007	S100Z (ENSANAG00000027821) #23	F2RL1 (ENSANAG00000021399) #22	F2R (ENSANAG00000020328) #21	F2RL2 (ENSANAG00000019493) #19	IQGAP2 (ENSANAG00000027336) #20	ENSANAG00000023009	SV2C (ENSANAG00000020779) #18	POC5 (ENSANAG00000033971) #16	POLK (ENSANAG00000033747) #14	CERT1 (ENSANAG00000035049) #13	HMGCR (ENSANAG00000030341) #12	ENSANAG00000019757	ANKRD31 (ENSANAG00000022634) #11	GCNT4 (ENSANAG00000019837) #10	FAM169A (ENSANAG00000030731) #9	ENSANAG00000022225 ##7	GFM2 (ENSANAG00000027737)	HEXB (ENSANAG00000022254)	ENC1 (ENSANAG00000020131)
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.e #30	ENSGT00390000009710.f #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Bushbaby	MODERN SPECIES	132	ARSB (ENSOGAG00000008620) #36	LHFPL2 (ENSOGAG00000024907) #34	SCAMP1 (ENSOGAG00000014059) #33	AP3B1 (ENSOGAG00000002145) #31	ENSOGAG00000026363	TBCA (ENSOGAG00000010198) #30	OTP (ENSOGAG00000010197) #29	WDR41 (ENSOGAG00000006937) #28	PDE8B (ENSOGAG00000006930) #27	ZBED3 (ENSOGAG00000033172) #26	AGGF1 (ENSOGAG00000003439) #25	CRHBP (ENSOGAG00000003437) #24	S100Z (ENSOGAG00000027239) #23	F2RL1 (ENSOGAG00000001151) #22	F2R (ENSOGAG00000013594) #21	F2RL2 (ENSOGAG00000030469) #19	IQGAP2 (ENSOGAG00000013579) #20	ENSOGAG00000012074	SV2C (ENSOGAG00000013571) #18	POC5 (ENSOGAG00000016674) #16	ANKDD1B (ENSOGAG00000007012) #15	POLK (ENSOGAG00000007007) #14	CERT1 (ENSOGAG00000003782) #13	HMGCR (ENSOGAG00000003776) #12	ENSOGAG00000028567 #11	GCNT4 (ENSOGAG00000011857) #10	FAM169A (ENSOGAG00000006270) #9	GFM2 (ENSOGAG00000008961)	HEXB (ENSOGAG00000008957)	ENC1 (ENSOGAG00000008956)	ENSOGAG00000033592
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.e #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Mouse lemur	MODERN SPECIES	3	ENSMICG00000045425	DEPDC1B (ENSMICG00000013552)	ELOVL7 (ENSMICG00000042937)	ERCC8 (ENSMICG00000008906)	ENSMICG00000044997	ENSMICG00000016668 #30	OTP (ENSMICG00000030234) #29	WDR41 (ENSMICG00000016642) #28	PDE8B (ENSMICG00000016635) #27	AGGF1 (ENSMICG00000028679) #25	CRHBP (ENSMICG00000034984) #24	S100Z (ENSMICG00000026826) #23	F2RL1 (ENSMICG00000032411) #22	F2R (ENSMICG00000029417) #21	IQGAP2 (ENSMICG00000007353) #20	F2RL2 (ENSMICG00000036441) #19	SV2C (ENSMICG00000007347) #18	ENSMICG00000044813	ENSMICG00000006494 #16	ANKDD1B (ENSMICG00000031448) #15	POLK (ENSMICG00000000006) #14	CERT1 (ENSMICG00000028951) #13	HMGCR (ENSMICG00000014536) #12	ANKRD31 (ENSMICG00000014418) #11	GCNT4 (ENSMICG00000014409) #10	FAM169A (ENSMICG00000000753) #9	ENSMICG00000027319 ##7	GFM2 (ENSMICG00000000749)	HEXB (ENSMICG00000032021)	ENC1 (ENSMICG00000000742)	ARHGEF28 (ENSMICG00000011823)
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.e #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Coquerels sifaka	MODERN SPECIES	999	DMGDH (ENSPCOG00000014759) #37	ARSB (ENSPCOG00000024261) #36	LHFPL2 (ENSPCOG00000006098) #34	SCAMP1 (ENSPCOG00000022266) #33	ENSPCOG00000004066 #31	ENSPCOG00000012906	TBCA (ENSPCOG00000005770) #30	OTP (ENSPCOG00000028773) #29	WDR41 (ENSPCOG00000019741) #28	PDE8B (ENSPCOG00000017117) #27	AGGF1 (ENSPCOG00000026723) #25	CRHBP (ENSPCOG00000026267) #24	S100Z (ENSPCOG00000005734) #23	F2RL1 (ENSPCOG00000015685) #22	IQGAP2 (ENSPCOG00000026521) #20	F2RL2 (ENSPCOG00000018657) #19	SV2C (ENSPCOG00000018991) #18	POC5 (ENSPCOG00000025218) #16	ANKDD1B (ENSPCOG00000020302) #15	POLK (ENSPCOG00000027526) #14	CERT1 (ENSPCOG00000016749) #13	HMGCR (ENSPCOG00000016696) #12	ANKRD31 (ENSPCOG00000017441) #11	FAM169A (ENSPCOG00000020536) #9	NSA2 (ENSPCOG00000016622) ##7	GFM2 (ENSPCOG00000022606)	HEXB (ENSPCOG00000017903)	ENC1 (ENSPCOG00000026678)	ARHGEF28 (ENSPCOG00000016965)	ANKRA2 (ENSPCOG00000018380)	FOXD1 (ENSPCOG00000012192)
Greater bamboo lemur	MODERN SPECIES	704															F2R (ENSPSMG00000007744) #21	F2RL2 (ENSPSMG00000007726) #19	IQGAP2 (ENSPSMG00000007684) #20	SV2C (ENSPSMG00000007473) #18	ENSPSMG00000007465	POC5 (ENSPSMG00000007439) #16	ANKDD1B (ENSPSMG00000007381) #15	POLK (ENSPSMG00000007161) #14	CERT1 (ENSPSMG00000006506) #13	HMGCR (ENSPSMG00000006165) #12
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Glires	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Sciuridae	ANCESTRAL SPECIES	18											ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Marmotini	ANCESTRAL SPECIES	23											ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Marmotini_b	ANCESTRAL SPECIES	92											ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Arctic ground squirrel	MODERN SPECIES	299												CRHBP (ENSUPAG00010006069) #24	S100Z (ENSUPAG00010006063) #23	F2RL1 (ENSUPAG00010006060) #22	F2R (ENSUPAG00010006053) #21	F2RL2 (ENSUPAG00010006042) #19	IQGAP2 (ENSUPAG00010006026) #20	SV2C (ENSUPAG00010006006) #18	POC5 (ENSUPAG00010005963) #16	ANKDD1B (ENSUPAG00010005945) #15	POLK (ENSUPAG00010005814) #14	ENSUPAG00010005498 #13	HMGCR (ENSUPAG00010005462) #12	ENSUPAG00010005442 #11	GCNT4 (ENSUPAG00010005440) #10	FAM169A (ENSUPAG00010005409) #9	NSA2 (ENSUPAG00010005383) ##7	GFM2 (ENSUPAG00010005333)	HEXB (ENSUPAG00010004984)	ENC1 (ENSUPAG00010004981)
Squirrel	MODERN SPECIES	149											CRHBP (ENSSTOG00000009510) #24	S100Z (ENSSTOG00000009498) #23	F2RL1 (ENSSTOG00000026512) #22	F2R (ENSSTOG00000008252) #21	IQGAP2 (ENSSTOG00000013504) #20	F2RL2 (ENSSTOG00000034743) #19	SV2C (ENSSTOG00000013490) #18	POC5 (ENSSTOG00000009839) #16	ANKDD1B (ENSSTOG00000009832) #15	ENSSTOG00000003205 #14	CERT1 (ENSSTOG00000003170) #13	HMGCR (ENSSTOG00000009610) #12	ANKRD31 (ENSSTOG00000034383) #11	FAM169A (ENSSTOG00000007975) #9	ENSSTOG00000007959 ##7	GFM2 (ENSSTOG00000007931)	HEXB (ENSSTOG00000007903)	ENSSTOG00000027827	ENC1 (ENSSTOG00000029074)	ARHGEF28 (ENSSTOG00000009005)	UTP15 (ENSSTOG00000027733)
Alpin marmot	MODERN SPECIES	48												S100Z (ENSMMMG00000000720) #23	F2RL1 (ENSMMMG00000000723) #22	F2R (ENSMMMG00000000732) #21	IQGAP2 (ENSMMMG00000000750) #20	F2RL2 (ENSMMMG00000000828) #19	SV2C (ENSMMMG00000000845) #18	POC5 (ENSMMMG00000000939) #16	ANKDD1B (ENSMMMG00000001142) #15	POLK (ENSMMMG00000001203) #14	CERT1 (ENSMMMG00000001422) #13	HMGCR (ENSMMMG00000001547) #12	ENSMMMG00000001628 #11	GCNT4 (ENSMMMG00000001657) #10	FAM169A (ENSMMMG00000001677) #9	NSA2 (ENSMMMG00000001722) ##7	GFM2 (ENSMMMG00000001763)	HEXB (ENSMMMG00000002087)	ENSMMMG00000002120	ENC1 (ENSMMMG00000002129)	ARHGEF28 (ENSMMMG00000002152)
Eurasian red squirrel	MODERN SPECIES	15	CENPH (ENSSVLG00005009762)	ENSSVLG00005009714	CDK7 (ENSSVLG00005009632)	CCDC125 (ENSSVLG00005009466)	ENSSVLG00005009362	RAD17 (ENSSVLG00005009140)	MARVELD2 (ENSSVLG00005008937)	OCLN (ENSSVLG00005008798)	ENSSVLG00005008740	ENSSVLG00005008651	CRHBP (ENSSVLG00005008579) #24	S100Z (ENSSVLG00005008555) #23	ENSSVLG00005008549	ENSSVLG00005008525 #22	F2R (ENSSVLG00005008506) #21	F2RL2 (ENSSVLG00005008481) #19	IQGAP2 (ENSSVLG00005007881) #20	SV2C (ENSSVLG00005007661) #18	ENSSVLG00005007604	POC5 (ENSSVLG00005007522) #16	ANKDD1B (ENSSVLG00005007433) #15	POLK (ENSSVLG00005007352) #14	ENSSVLG00005007250	CERT1 (ENSSVLG00005007093) #13	HMGCR (ENSSVLG00005006942) #12	ANKRD31 (ENSSVLG00005006845) #11	GCNT4 (ENSSVLG00005006815) #10	FAM169A (ENSSVLG00005006669) #9	NSA2 (ENSSVLG00005006610) ##7	ENSSVLG00005006579	GFM2 (ENSSVLG00005006519)
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Hystricomorpha_a	ANCESTRAL SPECIES	72	ENSGT00390000003122.c.b	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Hystricomorpha_b	ANCESTRAL SPECIES	95	ENSGT00390000003122.c.b	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Long-tailed chinchilla	MODERN SPECIES	132	ARSB (ENSCLAG00000013316) #36	ENSCLAG00000009820	LHFPL2 (ENSCLAG00000010028) #34	SCAMP1 (ENSCLAG00000010430) #33	ENSCLAG00000017966	AP3B1 (ENSCLAG00000017374) #31	TBCA (ENSCLAG00000011463) #30	OTP (ENSCLAG00000011647) #29	WDR41 (ENSCLAG00000010095) #28	PDE8B (ENSCLAG00000011619) #27	AGGF1 (ENSCLAG00000012928) #25	CRHBP (ENSCLAG00000009942) #24	S100Z (ENSCLAG00000010354) #23	F2RL1 (ENSCLAG00000010304) #22	IQGAP2 (ENSCLAG00000011435) #20	F2RL2 (ENSCLAG00000012739) #19	SV2C (ENSCLAG00000013949) #18	POC5 (ENSCLAG00000009830) #16	ANKDD1B (ENSCLAG00000010494) #15	POLK (ENSCLAG00000011236) #14	CERT1 (ENSCLAG00000011527) #13	HMGCR (ENSCLAG00000010132) #12	ANKRD31 (ENSCLAG00000011065) #11	ENSCLAG00000009641	GCNT4 (ENSCLAG00000010436) #10	ENSCLAG00000011385	FAM169A (ENSCLAG00000009619) #9	NSA2 (ENSCLAG00000010179) ##7	GFM2 (ENSCLAG00000013440)	HEXB (ENSCLAG00000016006)	ENC1 (ENSCLAG00000010345)
Guinea pig	MODERN SPECIES	29	ENSCPOG00000015027	GPBP1 (ENSCPOG00000012341)	ACTBL2 (ENSCPOG00000011023)	PLK2 (ENSCPOG00000021250)	RAB3C (ENSCPOG00000001394)	ENSCPOG00000039531	PDE4D (ENSCPOG00000004873)	DEPDC1B (ENSCPOG00000011483)	ELOVL7 (ENSCPOG00000037993)	ENSCPOG00000035041	ENSCPOG00000009626	CRHBP (ENSCPOG00000002422) #24	S100Z (ENSCPOG00000030952) #23	F2RL1 (ENSCPOG00000033414) #22	F2R (ENSCPOG00000032667) #21	F2RL2 (ENSCPOG00000002801) #19	IQGAP2 (ENSCPOG00000025031) #20	SV2C (ENSCPOG00000008567) #18
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000000425 #30	OTP (ENSHGLG00000003908) #29	ENSHGLG00000017808 #28	ENSHGLG00000038347	ENSHGLG00000041303	ENSHGLG00000002178 #27	ENSHGLG00000038975	ZBED3 (ENSHGLG00000042521) #26	AGGF1 (ENSHGLG00000000455) #25	ENSHGLG00000001729	ENSHGLG00000001594 #24	S100Z (ENSHGLG00000047331) #23	ENSHGLG00000044569	ENSHGLG00000000412 #21	ENSHGLG00000001189 #20	F2RL2 (ENSHGLG00000001444) #19	ENSHGLG00000001079	ENSHGLG00000000494 #18	ENSHGLG00000002909	ENSHGLG00000001351	PARG (ENSHGLG00000001430)	ENSHGLG00000036050	OGDHL (ENSHGLG00000001655)	ENSHGLG00000002348	CHAT (ENSHGLG00000000867)	SLC18A3 (ENSHGLG00000020633)	ERCC6 (ENSHGLG00000000923)	DRGX (ENSHGLG00000033413)	C10orf71 (ENSHGLG00000020256)	FAM170B (ENSHGLG00000045738)	VSTM4 (ENSHGLG00000001022)
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b.f ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b.f ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b.f ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Northern American deer mouse	MODERN SPECIES	6	Bhmt2 (ENSPEMG00000021198)	Dmgdh (ENSPEMG00000021307) #37	Arsb (ENSPEMG00000020554) #36	Lhfpl2 (ENSPEMG00000029932) #34	Scamp1 (ENSPEMG00000029280) #33	Ap3b1 (ENSPEMG00000021014) #31	Tbca (ENSPEMG00000015419) #30	ENSPEMG00000023412 #28	Pde8b (ENSPEMG00000020359) #27	Aggf1 (ENSPEMG00000015659) #25	Crhbp (ENSPEMG00000009836) #24	S100z (ENSPEMG00000013966) #23	F2rl1 (ENSPEMG00000029040) #22	F2r (ENSPEMG00000025363) #21	Iqgap2 (ENSPEMG00000013395) #20	F2rl2 (ENSPEMG00000019142) #19	Sv2c (ENSPEMG00000013942) #18	Poc5 (ENSPEMG00000008614) #16	Ankdd1b (ENSPEMG00000005192) #15	Polk (ENSPEMG00000019237) #14	ENSPEMG00000017070	Cert1 (ENSPEMG00000010777) #13	Hmgcr (ENSPEMG00000016961) #12	Ankrd31 (ENSPEMG00000018561) #11	Gcnt4 (ENSPEMG00000018132) #10	Fam169a (ENSPEMG00000010978) #9	Nsa2 (ENSPEMG00000015289) ##7	Gfm2 (ENSPEMG00000000622)	Hexb (ENSPEMG00000005317)	Enc1 (ENSPEMG00000001877)	Arhgef28 (ENSPEMG00000009703)
Prairie vole	MODERN SPECIES	6	Ap3b1 (ENSMOCG00000017264) #31	ENSMOCG00000005321	ENSMOCG00000006493	Tbca (ENSMOCG00000005814) #30	Otp (ENSMOCG00000019228) #29	ENSMOCG00000006214	Wdr41 (ENSMOCG00000006320) #28	Pde8b (ENSMOCG00000012277) #27	Zbed3 (ENSMOCG00000011692) #26	Aggf1 (ENSMOCG00000003377) #25	ENSMOCG00000001987	Crhbp (ENSMOCG00000021245) #24	S100z (ENSMOCG00000020194) #23	F2rl1 (ENSMOCG00000013582) #22	F2r (ENSMOCG00000012362) #21	F2rl2 (ENSMOCG00000008663) #19	Iqgap2 (ENSMOCG00000002734) #20	Sv2c (ENSMOCG00000021524) #18	Poc5 (ENSMOCG00000009038) #16	Ankdd1b (ENSMOCG00000003243) #15	ENSMOCG00000014817	Polk (ENSMOCG00000016143) #14	ENSMOCG00000019480 #13	Hmgcr (ENSMOCG00000008012) #12	ENSMOCG00000019171	Ankrd31 (ENSMOCG00000009502) #11	Gcnt4 (ENSMOCG00000017465) #10	Fam169a (ENSMOCG00000014172) #9	ENSMOCG00000012395 ##7	ENSMOCG00000004402	Hexb (ENSMOCG00000005839)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Golden Hamster	MODERN SPECIES	620	Bhmt2 (ENSMAUG00000008057)	Dmgdh (ENSMAUG00000011337) #37	Arsb (ENSMAUG00000005115) #36	Lhfpl2 (ENSMAUG00000020241) #34	Scamp1 (ENSMAUG00000018961) #33	Ap3b1 (ENSMAUG00000001490) #31	Tbca (ENSMAUG00000018233) #30	Otp (ENSMAUG00000007760) #29	Wdr41 (ENSMAUG00000004461) #28	Pde8b (ENSMAUG00000015472) #27	Aggf1 (ENSMAUG00000012678) #25	Crhbp (ENSMAUG00000010702) #24	S100z (ENSMAUG00000001531) #23	F2rl1 (ENSMAUG00000012126) #22	F2r (ENSMAUG00000010556) #21	F2rl2 (ENSMAUG00000015710) #19	Iqgap2 (ENSMAUG00000022130) #20	Sv2c (ENSMAUG00000005414) #18	Poc5 (ENSMAUG00000003174) #16	Ankdd1b (ENSMAUG00000018964) #15	Polk (ENSMAUG00000016560) #14	Cert1 (ENSMAUG00000019472) #13	Hmgcr (ENSMAUG00000012278) #12	Ankrd31 (ENSMAUG00000020142) #11	Gcnt4 (ENSMAUG00000017229) #10	Fam169a (ENSMAUG00000009954) #9	Nsa2 (ENSMAUG00000002302) ##7	Gfm2 (ENSMAUG00000022103)	Hexb (ENSMAUG00000014888)	Enc1 (ENSMAUG00000004740)	Arhgef28 (ENSMAUG00000021575)
Chinese hamster chok1gshd	MODERN SPECIES	1	Lhfpl2 (ENSCGRG00001003627) #34	Scamp1 (ENSCGRG00001004428) #33	Ap3b1 (ENSCGRG00001009397) #31	Tbca (ENSCGRG00001021971) #30	Otp (ENSCGRG00001022392) #29	ENSCGRG00001008932	Wdr41 (ENSCGRG00001008129) #28	Pde8b (ENSCGRG00001015606) #27	Zbed3 (ENSCGRG00001010271) #26	Aggf1 (ENSCGRG00001017039) #25	Crhbp (ENSCGRG00001008314) #24	S100z (ENSCGRG00001009971) #23	F2rl1 (ENSCGRG00001012796) #22	F2r (ENSCGRG00001016531) #21	Iqgap2 (ENSCGRG00001019858) #20	F2rl2 (ENSCGRG00001014616) #19	Sv2c (ENSCGRG00001015770) #18	Poc5 (ENSCGRG00001015817) #16	Ankdd1b (ENSCGRG00001016471) #15	ENSCGRG00001012277	Polk (ENSCGRG00001013007) #14	Cert1 (ENSCGRG00001020451) #13	HMGCR (ENSCGRG00001016870) #12	Ankrd31 (ENSCGRG00001018162) #11	ENSCGRG00001014554	ENSCGRG00001008489	Gcnt4 (ENSCGRG00001008293) #10	Fam169a (ENSCGRG00001021297) #9	ENSCGRG00001012819 ##7	Gfm2 (ENSCGRG00001022802)	Hexb (ENSCGRG00001020320)
Murinae	ANCESTRAL SPECIES	24	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Mus	ANCESTRAL SPECIES	22	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00900000143364	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Mus_A	ANCESTRAL SPECIES	14	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00900000143364	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00860000136215	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00390000018706.m.b.b.f.b ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Mus_B	ANCESTRAL SPECIES	13	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00900000143364	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00860000136215	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Mouse	MODERN SPECIES	4	Arsb (ENSMUSG00000042082) #36	Lhfpl2 (ENSMUSG00000045312) #34	Scamp1 (ENSMUSG00000021687) #33	Ap3b1 (ENSMUSG00000021686) #31	Tbca (ENSMUSG00000042043) #30	Otp (ENSMUSG00000021685) #29	Wdr41 (ENSMUSG00000042015) #28	Pde8b (ENSMUSG00000021684) #27	Zbed3 (ENSMUSG00000041995) #26	Aggf1 (ENSMUSG00000021681) #25	Crhbp (ENSMUSG00000021680) #24	S100z (ENSMUSG00000021679) #23	F2rl1 (ENSMUSG00000021678) #22	F2r (ENSMUSG00000048376) #21	Iqgap2 (ENSMUSG00000021676) #20	F2rl2 (ENSMUSG00000021675) #19	Sv2c (ENSMUSG00000051111) #18	Btf3l4b (ENSMUSG00000114133)	Poc5 (ENSMUSG00000021671) #16	Ankdd1b (ENSMUSG00000047117) #15	Polk (ENSMUSG00000021668) #14	Cert1 (ENSMUSG00000021669) #13	Hmgcr (ENSMUSG00000021670) #12	Ankrd31 (ENSMUSG00000109561) #11	Gcnt4 (ENSMUSG00000091387) #10	1700029F12Rik (ENSMUSG00000052075)	Fam169a (ENSMUSG00000041817) #9	Gm6169 (ENSMUSG00000057762)	Nsa2 (ENSMUSG00000060739) ##7	Gfm2 (ENSMUSG00000021666)	Hexb (ENSMUSG00000021665)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00900000143364	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026.c #28	ENSGT00940000157817 #27	ENSGT00940000164103 #26	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00860000136215	ENSGT00510000048902.a #9	ENSGT00390000018706.m.a #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Steppe mouse	MODERN SPECIES	3412	Dmgdh (ENSMSIG00000011670) #37	Arsb (ENSMSIG00000011652) #36	Lhfpl2 (ENSMSIG00000011618) #34	Scamp1 (ENSMSIG00000011596) #33	Ap3b1 (ENSMSIG00000011521) #31	ENSMSIG00000011491 #30	Otp (ENSMSIG00000011481) #29	ENSMSIG00000011421 #28	Pde8b (ENSMSIG00000011209) #27	ENSMSIG00000011178 #26	Aggf1 (ENSMSIG00000011146) #25	Crhbp (ENSMSIG00000011120) #24	S100z (ENSMSIG00000011096) #23	F2rl1 (ENSMSIG00000011086) #22	F2r (ENSMSIG00000011072) #21	F2rl2 (ENSMSIG00000011060) #19	Iqgap2 (ENSMSIG00000011044) #20
spretus	MODERN SPECIES	4	Lhfpl2 (MGP_SPRETEiJ_G0019669) #34	Scamp1 (MGP_SPRETEiJ_G0019670) #33	MGP_SPRETEiJ_G0019671	Ap3b1 (MGP_SPRETEiJ_G0019672) #31	Tbca (MGP_SPRETEiJ_G0019673) #30	Otp (MGP_SPRETEiJ_G0019674) #29	MGP_SPRETEiJ_G0019675 #28	Pde8b (MGP_SPRETEiJ_G0019676) #27	Zbed3 (MGP_SPRETEiJ_G0019677) #26	Aggf1 (MGP_SPRETEiJ_G0019678) #25	Crhbp (MGP_SPRETEiJ_G0019679) #24	S100z (MGP_SPRETEiJ_G0019680) #23	F2rl1 (MGP_SPRETEiJ_G0019681) #22	F2r (MGP_SPRETEiJ_G0019682) #21	Iqgap2 (MGP_SPRETEiJ_G0019683) #20	F2rl2 (MGP_SPRETEiJ_G0019684) #19	Sv2c (MGP_SPRETEiJ_G0019685) #18	Poc5 (MGP_SPRETEiJ_G0019686) #16	Ankdd1b (MGP_SPRETEiJ_G0019687) #15	Polk (MGP_SPRETEiJ_G0019688) #14	MGP_SPRETEiJ_G0019689	Cert1 (MGP_SPRETEiJ_G0019690) #13	Hmgcr (MGP_SPRETEiJ_G0019691) #12	Gcnt4 (MGP_SPRETEiJ_G0019692) #10	1700029F12Rik (MGP_SPRETEiJ_G0019693)	Fam169a (MGP_SPRETEiJ_G0019694) #9	MGP_SPRETEiJ_G0019695 #7	Gfm2 (MGP_SPRETEiJ_G0019696)	Hexb (MGP_SPRETEiJ_G0019697)	Enc1 (MGP_SPRETEiJ_G0019698)	Arhgef28 (MGP_SPRETEiJ_G0019699)
Ryukyu mouse	MODERN SPECIES	4	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #34	Scamp1 (MGP_CAROLIEiJ_G0018787) #33	MGP_CAROLIEiJ_G0018788	Ap3b1 (MGP_CAROLIEiJ_G0018789) #31	Tbca (MGP_CAROLIEiJ_G0018790) #30	Otp (MGP_CAROLIEiJ_G0018791) #29	MGP_CAROLIEiJ_G0018792 #28	Pde8b (MGP_CAROLIEiJ_G0018793) #27	Zbed3 (MGP_CAROLIEiJ_G0018794) #26	Aggf1 (MGP_CAROLIEiJ_G0018795) #25	Crhbp (MGP_CAROLIEiJ_G0018796) #24	S100z (MGP_CAROLIEiJ_G0018797) #23	F2rl1 (MGP_CAROLIEiJ_G0018798) #22	F2r (MGP_CAROLIEiJ_G0018799) #21	Iqgap2 (MGP_CAROLIEiJ_G0018800) #20	F2rl2 (MGP_CAROLIEiJ_G0018801) #19	Sv2c (MGP_CAROLIEiJ_G0018802) #18	Poc5 (MGP_CAROLIEiJ_G0018803) #16	Ankdd1b (MGP_CAROLIEiJ_G0018804) #15	Polk (MGP_CAROLIEiJ_G0018805) #14	MGP_CAROLIEiJ_G0018806	Cert1 (MGP_CAROLIEiJ_G0018807) #13	Hmgcr (MGP_CAROLIEiJ_G0018808) #12	MGP_CAROLIEiJ_G0018809 #11	Gcnt4 (MGP_CAROLIEiJ_G0018810) #10	1700029F12Rik (MGP_CAROLIEiJ_G0018811)	Fam169a (MGP_CAROLIEiJ_G0018812) #9	Nsa2 (MGP_CAROLIEiJ_G0018813) ##7	Gfm2 (MGP_CAROLIEiJ_G0018814)	Hexb (MGP_CAROLIEiJ_G0018815)	Enc1 (MGP_CAROLIEiJ_G0018816)
Shrew mouse	MODERN SPECIES	2	Lhfpl2 (MGP_PahariEiJ_G0015863) #34	Scamp1 (MGP_PahariEiJ_G0015864) #33	MGP_PahariEiJ_G0015865	Ap3b1 (MGP_PahariEiJ_G0015866) #31	Tbca (MGP_PahariEiJ_G0015867) #30	Otp (MGP_PahariEiJ_G0015868) #29	MGP_PahariEiJ_G0015869 #28	Pde8b (MGP_PahariEiJ_G0015870) #27	Zbed3 (MGP_PahariEiJ_G0015871) #26	Aggf1 (MGP_PahariEiJ_G0015872) #25	Crhbp (MGP_PahariEiJ_G0015873) #24	S100z (MGP_PahariEiJ_G0015874) #23	F2rl1 (MGP_PahariEiJ_G0015875) #22	F2r (MGP_PahariEiJ_G0015876) #21	Iqgap2 (MGP_PahariEiJ_G0015877) #20	F2rl2 (MGP_PahariEiJ_G0015878) #19	Sv2c (MGP_PahariEiJ_G0015879) #18	Poc5 (MGP_PahariEiJ_G0015880) #16	Ankdd1b (MGP_PahariEiJ_G0015881) #15	Polk (MGP_PahariEiJ_G0015882) #14	MGP_PahariEiJ_G0015883	Cert1 (MGP_PahariEiJ_G0015884) #13	Hmgcr (MGP_PahariEiJ_G0015885) #12	Gcnt4 (MGP_PahariEiJ_G0015886) #10	Fam169a (MGP_PahariEiJ_G0015887) #9	Nsa2 (MGP_PahariEiJ_G0015888) ##7	Gfm2 (MGP_PahariEiJ_G0015889)	Hexb (MGP_PahariEiJ_G0015890)	Enc1 (MGP_PahariEiJ_G0015891)	Arhgef28 (MGP_PahariEiJ_G0015892)	Utp15 (MGP_PahariEiJ_G0015893)
Rat	MODERN SPECIES	11	Tbca (ENSRNOG00000048342) #30	Otp (ENSRNOG00000010560) #29	Wdr41 (ENSRNOG00000025462) #28	Pde8b (ENSRNOG00000010280) #27	ENSRNOG00000067662	LOC100912266 (ENSRNOG00000059441)	Zbed3 (ENSRNOG00000028941) #26	ENSRNOG00000063007	Aggf1 (ENSRNOG00000029304) #25	Crhbp (ENSRNOG00000017890) #24	S100z (ENSRNOG00000017998) #23	F2rl1 (ENSRNOG00000018003) #22	AABR07007730.1 (ENSRNOG00000018045)	F2r (ENSRNOG00000048043) #21	Iqgap2 (ENSRNOG00000025406) #20	F2rl2 (ENSRNOG00000018054) #19	Sv2c (ENSRNOG00000018094) #18	AABR07007744.2 (ENSRNOG00000060714)	Poc5 (ENSRNOG00000018193) #16	Ankdd1b (ENSRNOG00000025377) #15	Polk (ENSRNOG00000060626) #14	ENSRNOG00000067644	Cert1 (ENSRNOG00000015686) #13	Hmgcr (ENSRNOG00000016122) #12	Ankrd31 (ENSRNOG00000025321) #11	Gcnt4 (ENSRNOG00000064612) #10	Fam169a (ENSRNOG00000016505) #9	Nsa2 (ENSRNOG00000016530) ##7	Gfm2 (ENSRNOG00000025285)	Hexb (ENSRNOG00000025274)	Enc1 (ENSRNOG00000016541)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1748			ENSNGAG00000011149	Ap3b1 (ENSNGAG00000015487) #31	Tbca (ENSNGAG00000020367) #30	Otp (ENSNGAG00000016224) #29	ENSNGAG00000018792 #28	Pde8b (ENSNGAG00000003750) #27	Zbed3 (ENSNGAG00000000806) #26	Aggf1 (ENSNGAG00000008354) #25	Crhbp (ENSNGAG00000013680) #24	S100z (ENSNGAG00000014093) #23	F2rl1 (ENSNGAG00000019243) #22	F2r (ENSNGAG00000001548) #21	Iqgap2 (ENSNGAG00000005917) #20	F2rl2 (ENSNGAG00000013049) #19	Sv2c (ENSNGAG00000014621) #18
Lesser Egyptian jerboa	MODERN SPECIES	45	Adamts19 (ENSJJAG00000021431)	Isoc1 (ENSJJAG00000019157)	Slc27a6 (ENSJJAG00000020519)	ENSJJAG00000017710	Fbn2 (ENSJJAG00000020592)	Slc12a2 (ENSJJAG00000019580)	ENSJJAG00000017426	Ctxn3 (ENSJJAG00000011014)	Prrc1 (ENSJJAG00000011454)	Crhbp (ENSJJAG00000010630) #24	S100z (ENSJJAG00000013195) #23	ENSJJAG00000018088	F2rl1 (ENSJJAG00000005361) #22	F2r (ENSJJAG00000021467) #21	Iqgap2 (ENSJJAG00000023927) #20	F2rl2 (ENSJJAG00000020545) #19	Sv2c (ENSJJAG00000012121) #18	Poc5 (ENSJJAG00000019666) #16	Ankdd1b (ENSJJAG00000013237) #15	Polk (ENSJJAG00000004931) #14	Cert1 (ENSJJAG00000023198) #13	Hmgcr (ENSJJAG00000010723) #12	ENSJJAG00000010566 #11	Gcnt4 (ENSJJAG00000010750) #10	ENSJJAG00000016281	Fam169a (ENSJJAG00000011041) #9	Nsa2 (ENSJJAG00000017152) ##7	Gfm2 (ENSJJAG00000024278)	Hexb (ENSJJAG00000023858)	Enc1 (ENSJJAG00000023945)	Arhgef28 (ENSJJAG00000015178)
Kangaroo rat	MODERN SPECIES	402	ENSDORG00000004059	Nt5el (ENSDORG00000025625)	Rgs7bp (ENSDORG00000024658)	Shisal2b (ENSDORG00000009896)	Srek1ip1 (ENSDORG00000009897)	ENSDORG00000028891	Cwc27 (ENSDORG00000009898)	Adamts6 (ENSDORG00000004761)	ENSDORG00000028726	Ppwd1 (ENSDORG00000007359)	Crhbp (ENSDORG00000002200) #24	S100z (ENSDORG00000026410) #23	F2rl1 (ENSDORG00000004660) #22	ENSDORG00000024082	F2r (ENSDORG00000023264) #21	F2rl2 (ENSDORG00000006832) #19	Iqgap2 (ENSDORG00000006829) #20	Sv2c (ENSDORG00000004739) #18	Poc5 (ENSDORG00000000829) #16	Ankdd1b (ENSDORG00000007845) #15	Polk (ENSDORG00000007761) #14	Cert1 (ENSDORG00000005457) #13	ENSDORG00000005455 #12	Ankrd31 (ENSDORG00000008528) #11	Gcnt4 (ENSDORG00000015957) #10	Fam169a (ENSDORG00000012641) #9	Nsa2 (ENSDORG00000012640) ##7	ENSDORG00000030249	Gfm2 (ENSDORG00000016231)	ENSDORG00000016229	Enc1 (ENSDORG00000016227)
Tree shrew	MODERN SPECIES	947														F2RL1 (ENSTBEG00000011751) #22	F2R (ENSTBEG00000011565) #21	F2RL2 (ENSTBEG00000011506) #19	IQGAP2 (ENSTBEG00000010997) #20	SV2C (ENSTBEG00000010889) #18
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000163343	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000170332	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000170332	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000163343	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000170332	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00940000163343	ENSGT00980000201383.C	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00390000004454 #16	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000170332	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706.m.b.a ##7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Common wonbat	MODERN SPECIES	1011	ENSVURG00010019164	AP3B1 (ENSVURG00010019144) #31	ENSVURG00010019136	ENSVURG00010019130	OTP (ENSVURG00010019123) #29	WDR41 (ENSVURG00010019111) #28	PDE8B (ENSVURG00010016850) #27	ENSVURG00010016681	ENSVURG00010016663	ENSVURG00010016651 #25	ENSVURG00010016641	CRHBP (ENSVURG00010016624) #24	S100Z (ENSVURG00010016607) #23	F2RL1 (ENSVURG00010016599) #22	F2R (ENSVURG00010016592) #21	F2RL2 (ENSVURG00010016587) #19	IQGAP2 (ENSVURG00010016559) #20	SV2C (ENSVURG00010016524) #18	POC5 (ENSVURG00010016492) #16	ANKDD1B (ENSVURG00010016454) #15	POLK (ENSVURG00010016425) #14	CERT1 (ENSVURG00010016371) #13	HMGCR (ENSVURG00010016331) #12
koala	MODERN SPECIES	73	SCAMP1 (ENSPCIG00000024949) #33	ENSPCIG00000031686 #31	ENSPCIG00000017497 #31	ENSPCIG00000014903 #30	OTP (ENSPCIG00000014906) #29	WDR41 (ENSPCIG00000002260) #28	PDE8B (ENSPCIG00000002178) #27	ENSPCIG00000002120	ENSPCIG00000002090	AGGF1 (ENSPCIG00000002077) #25	CRHBP (ENSPCIG00000032088) #24	S100Z (ENSPCIG00000036527) #23	F2RL1 (ENSPCIG00000002046) #22	F2R (ENSPCIG00000002013) #21	IQGAP2 (ENSPCIG00000028736) #20	F2RL2 (ENSPCIG00000029189) #19	SV2C (ENSPCIG00000027306) #18	ENSPCIG00000027308 #16	ENSPCIG00000027312 #15	POLK (ENSPCIG00000027316) #14	CERT1 (ENSPCIG00000027317) #13	HMGCR (ENSPCIG00000027473) #12	ENSPCIG00000027474	ENSPCIG00000015721	GCNT4 (ENSPCIG00000015727) #10	FAM169A (ENSPCIG00000010270) #9	NSA2 (ENSPCIG00000010269) ##7	GFM2 (ENSPCIG00000020810)	HEXB (ENSPCIG00000010267)	ENC1 (ENSPCIG00000010266)	ARHGEF28 (ENSPCIG00000006933)
Wallaby	MODERN SPECIES	12795																F2RL2 (ENSMEUG00000013879) #19
Tasmanian devil	MODERN SPECIES		DMGDH (ENSSHAG00000014992) #37	ARSB (ENSSHAG00000015401) #36	LHFPL2 (ENSSHAG00000028883) #34	SCAMP1 (ENSSHAG00000016943) #33	AP3B1 (ENSSHAG00000017224) #31	TBCA (ENSSHAG00000025953) #30	OTP (ENSSHAG00000018090) #29	WDR41 (ENSSHAG00000018180) #28	PDE8B (ENSSHAG00000018263) #27	AGGF1 (ENSSHAG00000004570) #25	CRHBP (ENSSHAG00000006864) #24	S100Z (ENSSHAG00000028739) #23	F2RL1 (ENSSHAG00000008088) #22	F2R (ENSSHAG00000009153) #21	IQGAP2 (ENSSHAG00000001152) #20	F2RL2 (ENSSHAG00000028606) #19	SV2C (ENSSHAG00000011331) #18	POC5 (ENSSHAG00000008712) #16	ANKDD1B (ENSSHAG00000028889) #15	POLK (ENSSHAG00000006899) #14	CERT1 (ENSSHAG00000004954) #13	HMGCR (ENSSHAG00000004177) #12	ENSSHAG00000018123	GCNT4 (ENSSHAG00000018019) #10	FAM169A (ENSSHAG00000017681) #9	NSA2 (ENSSHAG00000017654) ##7	GFM2 (ENSSHAG00000017593)	HEXB (ENSSHAG00000017520)	ENC1 (ENSSHAG00000017407)	ARHGEF28 (ENSSHAG00000014463)	UTP15 (ENSSHAG00000013388)
Opossum	MODERN SPECIES	2	ENSMODG00000038325	MAN2A1 (ENSMODG00000001310)	ENSMODG00000001250	ENSMODG00000001247	GADD45G (ENSMODG00000001225)	ENSMODG00000001216	ENSMODG00000027439	ZNF608 (ENSMODG00000001045)	ENSMODG00000044426	GRAMD2B (ENSMODG00000001027)	ALDH7A1 (ENSMODG00000001001)	PHAX (ENSMODG00000000986)	F2RL1 (ENSMODG00000013578) #22	ENSMODG00000038124	F2R (ENSMODG00000013575) #21	F2RL2 (ENSMODG00000036999) #19	ENSMODG00000013568 #20	S100Z (ENSMODG00000019747) #23	CRHBP (ENSMODG00000019745) #24	AGGF1 (ENSMODG00000019743) #25	ENSMODG00000025309	ENSMODG00000044321	PDE8B (ENSMODG00000019740) #27	WDR41 (ENSMODG00000019738) #28	OTP (ENSMODG00000019736) #29	ENSMODG00000050562 #30	ENSMODG00000050949	AP3B1 (ENSMODG00000019733) #31	SCAMP1 (ENSMODG00000019731) #33	LHFPL2 (ENSMODG00000019730) #34	ENSMODG00000050358
Platypus	MODERN SPECIES		ENSOANG00000007895	DMGDH (ENSOANG00000007898) #37	ARSB (ENSOANG00000007901) #36	LHFPL2 (ENSOANG00000037815) #34	SCAMP1 (ENSOANG00000045234) #33	AP3B1 (ENSOANG00000003100) #31	ENSOANG00000036619	OTP (ENSOANG00000039355) #29	WDR41 (ENSOANG00000003103) #28	PDE8B (ENSOANG00000003104) #27	ENSOANG00000015761	AGGF1 (ENSOANG00000015762) #25	CRHBP (ENSOANG00000031473) #24	S100Z (ENSOANG00000015763) #23	F2R (ENSOANG00000039957) #21	F2RL2 (ENSOANG00000015767) #19	IQGAP2 (ENSOANG00000015766) #20	SV2C (ENSOANG00000015768) #18	POC5 (ENSOANG00000015769) #16	ENSOANG00000040574	POLK (ENSOANG00000015770) #14	CERT1 (ENSOANG00000015771) #13	HMGCR (ENSOANG00000014109) #12	ENSOANG00000020639 #11	GCNT4 (ENSOANG00000015773) #10	NSA2 (ENSOANG00000015775) #7	ENSOANG00000015776	HEXB (ENSOANG00000015777)	ENC1 (ENSOANG00000015778)	ARHGEF28 (ENSOANG00000015779)	UTP15 (ENSOANG00000008695)
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228	ENSGT00940000157156
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667.g #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228	ENSGT00940000157156
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.fb #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667.g #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228	ENSGT00940000157156
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710.fb #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667.g #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228	ENSGT00940000157156
Mainland tiger snake	MODERN SPECIES	33	ARSB (ENSNSUG00000007357) #36	LHFPL2 (ENSNSUG00000007360) #34	SCAMP1 (ENSNSUG00000007366) #33	AP3B1 (ENSNSUG00000007370) #31	ENSNSUG00000007432 #30	OTP (ENSNSUG00000007466) #29	ENSNSUG00000007467 #28	PDE8B (ENSNSUG00000007470) #27	AGGF1 (ENSNSUG00000008042) #25	CRHBP (ENSNSUG00000008150) #24	S100Z (ENSNSUG00000008153) #23	F2RL1 (ENSNSUG00000008164) #22	ENSNSUG00000008165 #21	ENSNSUG00000008166 #21	IQGAP2 (ENSNSUG00000008168) #20	F2RL2 (ENSNSUG00000010480) #19	SV2C (ENSNSUG00000010481) #18	ENSNSUG00000010508	ANKDD1B (ENSNSUG00000010511) #15	POLK (ENSNSUG00000010513) #14	CERT1 (ENSNSUG00000010520) #13	HMGCR (ENSNSUG00000010526) #12	GCNT4 (ENSNSUG00000010536) #10	FAM169A (ENSNSUG00000010538) #9	NSA2 (ENSNSUG00000010546) #7	GFM2 (ENSNSUG00000010550)	HEXB (ENSNSUG00000010836)	ENC1 (ENSNSUG00000010842)	ARHGEF28 (ENSNSUG00000010843)	UTP15 (ENSNSUG00000010848)	ANKRA2 (ENSNSUG00000010939)
Eastern brown snake	MODERN SPECIES	2	ARSB (ENSPTXG00000002543) #36	LHFPL2 (ENSPTXG00000002546) #34	SCAMP1 (ENSPTXG00000002548) #33	AP3B1 (ENSPTXG00000002552) #31	TBCA (ENSPTXG00000002558) #30	OTP (ENSPTXG00000002560) #29	WDR41 (ENSPTXG00000002565) #28	PDE8B (ENSPTXG00000002569) #27	AGGF1 (ENSPTXG00000002575) #25	CRHBP (ENSPTXG00000002580) #24	S100Z (ENSPTXG00000002582) #23	F2RL1 (ENSPTXG00000002584) #22	ENSPTXG00000002586 #21	ENSPTXG00000002587 #21	IQGAP2 (ENSPTXG00000002592) #20	F2RL2 (ENSPTXG00000002598) #19	SV2C (ENSPTXG00000002599) #18	ENSPTXG00000002603	ANKDD1B (ENSPTXG00000002606) #15	POLK (ENSPTXG00000002608) #14	CERT1 (ENSPTXG00000002617) #13	HMGCR (ENSPTXG00000002673) #12	GCNT4 (ENSPTXG00000002679) #10	FAM169A (ENSPTXG00000002682) #9	NSA2 (ENSPTXG00000002688) #7	GFM2 (ENSPTXG00000002694)	HEXB (ENSPTXG00000002700)	ENC1 (ENSPTXG00000002701)	ENSPTXG00000002702	ARHGEF28 (ENSPTXG00000002703)	UTP15 (ENSPTXG00000002705)
Blue-lipped sea krait	MODERN SPECIES	6444																F2RL2 (ENSLLTG00000007709) #19	ENSLLTG00000007719 #20
Indian cobra	MODERN SPECIES	1	LHFPL2 (ENSNNAG00000004879) #34	SCAMP1 (ENSNNAG00000004867) #33	AP3B1 (ENSNNAG00000004770) #31	TBCA (ENSNNAG00000004751) #30	OTP (ENSNNAG00000004735) #29	WDR41 (ENSNNAG00000004669) #28	PDE8B (ENSNNAG00000004615) #27	ENSNNAG00000004588	AGGF1 (ENSNNAG00000003959) #25	CRHBP (ENSNNAG00000003821) #24	S100Z (ENSNNAG00000003790) #23	F2RL1 (ENSNNAG00000003782) #22	ENSNNAG00000003747 #21	ENSNNAG00000003737 #21	IQGAP2 (ENSNNAG00000006766) #20	F2RL2 (ENSNNAG00000006742) #19	ENSNNAG00000006718	ENSNNAG00000006703 ##20	SV2C (ENSNNAG00000006660) #18	ENSNNAG00000006634	ANKDD1B (ENSNNAG00000006589) #15	POLK (ENSNNAG00000006564) #14	CERT1 (ENSNNAG00000006429) #13	HMGCR (ENSNNAG00000006352) #12	GCNT4 (ENSNNAG00000006323) #10	FAM169A (ENSNNAG00000006185) #9	NSA2 (ENSNNAG00000006166) #7	GFM2 (ENSNNAG00000003664)	HEXB (ENSNNAG00000003401)	ENC1 (ENSNNAG00000003390)	ENSNNAG00000003383
Lizard	MODERN SPECIES	1	ENSACAG00000040664	LHFPL2 (ENSACAG00000012574) #34	SCAMP1 (ENSACAG00000012476) #33	AP3B1 (ENSACAG00000007430) #31	tbca (ENSACAG00000035436) #30	OTP (ENSACAG00000030602) #29	WDR41 (ENSACAG00000007717) #28	PDE8B (ENSACAG00000007748) #27	AGGF1 (ENSACAG00000007847) #25	CRHBP (ENSACAG00000007916) #24	S100Z (ENSACAG00000036691) #23	F2RL1 (ENSACAG00000007980) #22	ENSACAG00000037420 #21	ENSACAG00000037432 #21	IQGAP2 (ENSACAG00000007992) #20	F2RL2 (ENSACAG00000008312) #19	ENSACAG00000041042	ENSACAG00000035710	ENSACAG00000043111	SV2C (ENSACAG00000008315) #18	ENSACAG00000008393	ENSACAG00000022708	ANKDD1B (ENSACAG00000008414) #15	POLK (ENSACAG00000008458) #14	CERT1 (ENSACAG00000008556) #13	HMGCR (ENSACAG00000008698) #12	ENSACAG00000041697	ENSACAG00000038096	GCNT4 (ENSACAG00000008942) #10	FAM169A (ENSACAG00000008952) #9	NSA2 (ENSACAG00000037978) #7
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b.j #21	ENSGT01050000244840.A.a.b.i #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831	ENSGT00390000004228
Common wall lizard	MODERN SPECIES	2	TBCA (ENSPMRG00000016895) #30	ENSPMRG00000016902	OTP (ENSPMRG00000016904) #29	WDR41 (ENSPMRG00000016907) #28	PDE8B (ENSPMRG00000016915) #27	AGGF1 (ENSPMRG00000016929) #25	CRHBP (ENSPMRG00000016936) #24	S100Z (ENSPMRG00000016943) #23	F2RL1 (ENSPMRG00000016949) #22	ENSPMRG00000016958 #21	ENSPMRG00000016964 #21	ENSPMRG00000016969 #21	ENSPMRG00000016973 #21	ENSPMRG00000016977	IQGAP2 (ENSPMRG00000016986) #20	F2RL2 (ENSPMRG00000017024) #19	SV2C (ENSPMRG00000017039) #18	ENSPMRG00000017062	ANKDD1B (ENSPMRG00000017071) #15	POLK (ENSPMRG00000017080) #14	ENSPMRG00000017083	CERT1 (ENSPMRG00000017088) #13	HMGCR (ENSPMRG00000017104) #12	GCNT4 (ENSPMRG00000017109) #10	ENSPMRG00000017111	FAM169A (ENSPMRG00000017115) #9	ENSPMRG00000017122 #7	GFM2 (ENSPMRG00000017136)	NSA2 (ENSPMRG00000017172) #7	HEXB (ENSPMRG00000017184)	ENC1 (ENSPMRG00000017190)
Argentine black and white tegu	MODERN SPECIES	10	OTP (ENSSMRG00000002889) #29	WDR41 (ENSSMRG00000002897) #28	PDE8B (ENSSMRG00000002916) #27	AGGF1 (ENSSMRG00000002967) #25	CRHBP (ENSSMRG00000002991) #24	S100Z (ENSSMRG00000002998) #23	F2RL1 (ENSSMRG00000003003) #22	ENSSMRG00000003010 #21	ENSSMRG00000003014 #21	ENSSMRG00000003017 #21	ENSSMRG00000003024 #21	ENSSMRG00000003030 #21	ENSSMRG00000003039 #21	ENSSMRG00000003045 #21	IQGAP2 (ENSSMRG00000003117) #20	F2RL2 (ENSSMRG00000003145) #19	SV2C (ENSSMRG00000003152) #18	ENSSMRG00000004013	ANKDD1B (ENSSMRG00000004024) #15	POLK (ENSSMRG00000004038) #14	CERT1 (ENSSMRG00000004058) #13	HMGCR (ENSSMRG00000004085) #12	ENSSMRG00000005770 #11	GCNT4 (ENSSMRG00000005771) #10	FAM169A (ENSSMRG00000005843) #9	NSA2 (ENSSMRG00000005871) #7	GFM2 (ENSSMRG00000005872)	HEXB (ENSSMRG00000005873)	ENC1 (ENSSMRG00000005874)	ENSSMRG00000006022	ARHGEF28 (ENSSMRG00000006038)
tuatara	MODERN SPECIES	99															IQGAP2 (ENSSPUG00000015208) #20	F2RL2 (ENSSPUG00000015249) #19	SV2C (ENSSPUG00000015255) #18	ENSSPUG00000015269	ENSSPUG00000015289	ANKDD1B (ENSSPUG00000015310) #15	POLK (ENSSPUG00000015332) #14	CERT1 (ENSSPUG00000015350) #13	HMGCR (ENSSPUG00000015403) #12	GCNT4 (ENSSPUG00000015459) #10
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00910000147370	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Aves	ANCESTRAL SPECIES	4	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Neognathae	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Anatidae	ANCESTRAL SPECIES	20	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00960000189505	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Pink-footed goose	MODERN SPECIES	183														F2R (ENSABRG00000014507) #21	F2RL1 (ENSABRG00000014503) #22	F2RL2 (ENSABRG00000014500) #19	IQGAP2 (ENSABRG00000003611) #20	SV2C (ENSABRG00000002343) #18	ENSABRG00000002309	ANKDD1B (ENSABRG00000002279) #15	POLK (ENSABRG00000002261) #14	CERT1 (ENSABRG00000000564) #13	MED18 (ENSABRG00000000557)	HMGCR (ENSABRG00000000510) #12	ENSABRG00000000482 #11	GCNT4 (ENSABRG00000000468) #10	FAM169A (ENSABRG00000000439) #9	NSA2 (ENSABRG00000000420) #7	GFM2 (ENSABRG00000000353)	HEXB (ENSABRG00000000318)	ENC1 (ENSABRG00000000310)
Duck	MODERN SPECIES	4281	LHFPL2 (ENSAPLG00000018490) #34	SCAMP1 (ENSAPLG00000030262) #33	ENSAPLG00000016508	AP3B1 (ENSAPLG00000013675) #31	ENSAPLG00000023605	ENSAPLG00000027407	WDR41 (ENSAPLG00000007656) #28	PDE8B (ENSAPLG00000007395) #27	ENSAPLG00000027714	AGGF1 (ENSAPLG00000001528) #25	CRHBP (ENSAPLG00000002564) #24	S100Z (ENSAPLG00000002758) #23	F2RL1 (ENSAPLG00000028669) #22	F2R (ENSAPLG00000001030) #21	IQGAP2 (ENSAPLG00000002992) #20	F2RL2 (ENSAPLG00000004486) #19	SV2C (ENSAPLG00000004492) #18	ENSAPLG00000021753	ENSAPLG00000004910	ANKDD1B (ENSAPLG00000004990) #15	POLK (ENSAPLG00000005033) #14	CERT1 (ENSAPLG00000005669) #13	MED18 (ENSAPLG00000006194)	HMGCR (ENSAPLG00000006209) #12	ENSAPLG00000006971 #11	GCNT4 (ENSAPLG00000018100) #10	FAM169A (ENSAPLG00000006999) #9	NSA2 (ENSAPLG00000007082) #7	GFM2 (ENSAPLG00000007221)	HEXB (ENSAPLG00000007852)	ENC1 (ENSAPLG00000001033)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01070000257240	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618.a #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Japanese quail	MODERN SPECIES	699	ELOVL7 (ENSCJPG00005001566)	ERCC8 (ENSCJPG00005001577)	NDUFAF2 (ENSCJPG00005001587)	ENSCJPG00005001594	ZSWIM6 (ENSCJPG00005001619)	KIF2A (ENSCJPG00005001655)	DIMT1 (ENSCJPG00005001670)	IPO11 (ENSCJPG00005001681)	HTR1A (ENSCJPG00005001694)	RNF180 (ENSCJPG00005001700)	RGS7BP (ENSCJPG00005001710)	SREK1IP1 (ENSCJPG00005001713)	CWC27 (ENSCJPG00005001716)	F2R (ENSCJPG00005001719) #21	IQGAP2 (ENSCJPG00005001735) #20	F2RL2 (ENSCJPG00005001776) #19	ENSCJPG00005001778	SV2C (ENSCJPG00005001780) #18	ENSCJPG00005001786	ANKDD1B (ENSCJPG00005001790) #15	POLK (ENSCJPG00005001795) #14	CERT1 (ENSCJPG00005001805) #13	MED18 (ENSCJPG00005001817)	HMGCR (ENSCJPG00005001819) #12	ENSCJPG00005001833 #11	ENSCJPG00005001841 #11	GCNT4 (ENSCJPG00005001847) #10	FAM169A (ENSCJPG00005001857) #9	NSA2 (ENSCJPG00005001870) #7	GFM2 (ENSCJPG00005001876)	HEXB (ENSCJPG00005001885)
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00940000170540	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01070000257240	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618.a #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Turkey	MODERN SPECIES	1299	HOMER1 (ENSMGAG00000020868)	ARSB (ENSMGAG00000018561) #36	ENSMGAG00000009256	LHFPL2 (ENSMGAG00000004731) #34	ENSMGAG00000018452 #33	AP3B1 (ENSMGAG00000016635) #31	ENSMGAG00000019777	WDR41 (ENSMGAG00000004765) #28	PDE8B (ENSMGAG00000004773) #27	AGGF1 (ENSMGAG00000004796) #25	CRHBP (ENSMGAG00000018504) #24	S100Z (ENSMGAG00000020183) #23	F2RL1 (ENSMGAG00000016031) #22	F2R (ENSMGAG00000020653) #21	IQGAP2 (ENSMGAG00000004823) #20	F2RL2 (ENSMGAG00000016024) #19	SV2C (ENSMGAG00000004851) #18	ENSMGAG00000022885 #13	ENSMGAG00000002014 #14	ENSMGAG00000017860 #14	ENSMGAG00000004910	ENSMGAG00000014911 #13	ENSMGAG00000017664	ENSMGAG00000022393 #11	ENSMGAG00000022603	ENSMGAG00000001400	ENSMGAG00000021702	FAM169A (ENSMGAG00000003916) #9	ENSMGAG00000005446 #7	GCNT4 (ENSMGAG00000004933) #10	TMEM174 (ENSMGAG00000004988)
Chicken	MODERN SPECIES	131	ENSGALG00010012555	DMGDH (ENSGALG00010012599) #37	ARSB (ENSGALG00010013306) #36	LHFPL2 (ENSGALG00010012614) #34	SCAMP1 (ENSGALG00010012667) #33	AP3B1 (ENSGALG00010012751) #31	TBCA (ENSGALG00010012795)	OTP (ENSGALG00010011364) #29	WDR41 (ENSGALG00010010254) #28	PDE8B (ENSGALG00010010275) #27	AGGF1 (ENSGALG00010010457) #25	CRHBP (ENSGALG00010011451) #24	S100Z (ENSGALG00010011454) #23	F2RL1 (ENSGALG00010010599) #21	IQGAP2 (ENSGALG00010010688) #20	F2RL2 (ENSGALG00010010783) #19	ENSGALG00010011395	SV2C (ENSGALG00010011403) #18	ENSGALG00010010951	ANKDD1B (ENSGALG00010010962) #15	POLK (ENSGALG00010010980) #14	CERT1 (ENSGALG00010010985) #13	MED18 (ENSGALG00010010990)	HMGCR (ENSGALG00010011029) #12	ENSGALG00010011059 #11	GCNT4 (ENSGALG00010011128) #10	FAM169A (ENSGALG00010010625) #9	NSA2 (ENSGALG00010010713) #7	GFM2 (ENSGALG00010010733)	HEXB (ENSGALG00010010769)	ENC1 (ENSGALG00010010905)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155123.b.k #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.b #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Golden eagle	MODERN SPECIES	91	ENSACCG00020011296	DMGDH (ENSACCG00020011281) #37	ARSB (ENSACCG00020011260) #36	LHFPL2 (ENSACCG00020011242) #34	SCAMP1 (ENSACCG00020011232) #33	AP3B1 (ENSACCG00020011192) #31	TBCA (ENSACCG00020011162) #30	OTP (ENSACCG00020011154) #29	WDR41 (ENSACCG00020011137) #28	PDE8B (ENSACCG00020011101) #27	AGGF1 (ENSACCG00020011059) #25	CRHBP (ENSACCG00020011040) #24	S100Z (ENSACCG00020011028) #23	F2RL1 (ENSACCG00020011018) #22	F2R (ENSACCG00020011014) #21	F2RL2 (ENSACCG00020011007) #19	IQGAP2 (ENSACCG00020010944) #20	SV2C (ENSACCG00020010876) #18	ENSACCG00020010857	ANKDD1B (ENSACCG00020010842) #15	POLK (ENSACCG00020010794) #14	CERT1 (ENSACCG00020010683) #13	MED18 (ENSACCG00020010650)	HMGCR (ENSACCG00020010636) #12	ENSACCG00020010622 #11	GCNT4 (ENSACCG00020010610) #10	FAM169A (ENSACCG00020010593) #9	NSA2 (ENSACCG00020010586) #7	GFM2 (ENSACCG00020010560)	HEXB (ENSACCG00020010543)	ENC1 (ENSACCG00020016841)
Kakapo	MODERN SPECIES	19	ENSSHBG00005012228	DMGDH (ENSSHBG00005012214) #37	ARSB (ENSSHBG00005012188) #36	LHFPL2 (ENSSHBG00005012173) #34	SCAMP1 (ENSSHBG00005012135) #33	AP3B1 (ENSSHBG00005011362) #31	TBCA (ENSSHBG00005011141) #30	OTP (ENSSHBG00005011114) #29	WDR41 (ENSSHBG00005011087) #28	PDE8B (ENSSHBG00005010892) #27	AGGF1 (ENSSHBG00005010807) #25	CRHBP (ENSSHBG00005010788) #24	S100Z (ENSSHBG00005010751) #23	F2RL1 (ENSSHBG00005010738) #22	F2R (ENSSHBG00005010723) #21	F2RL2 (ENSSHBG00005010691) #19	IQGAP2 (ENSSHBG00005010448) #20	SV2C (ENSSHBG00005010367) #18	ENSSHBG00005010286	ANKDD1B (ENSSHBG00005010251) #15	POLK (ENSSHBG00005010150) #14	ENSSHBG00005010064 #13	MED18 (ENSSHBG00005000150)	HMGCR (ENSSHBG00005000137) #12	ENSSHBG00005000109 #11	GCNT4 (ENSSHBG00005000099) #10	ENSSHBG00005021012 #9	NSA2 (ENSSHBG00005021010) #7	GFM2 (ENSSHBG00005020784)	HEXB (ENSSHBG00005020711)	ENC1 (ENSSHBG00005020707)
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155123.b.k #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000170540	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155123.b.k #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.a.a #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000170540	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155123.b.k #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Passeroidea	ANCESTRAL SPECIES	23					ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000170540	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b.l.a #13	ENSGT00390000003312	ENSGT00940000155123.b.k #13	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a
Zebra finch	MODERN SPECIES	104	MTX3 (ENSTGUG00000003611)	ENSTGUG00000003565	SERINC5 (ENSTGUG00000003543)	ENSTGUG00000020535	GCNT1 (ENSTGUG00000003503)	TBCA (ENSTGUG00000003968)	RFK (ENSTGUG00000024019)	ENSTGUG00000020870	OTP (ENSTGUG00000024121) #29	WDR41 (ENSTGUG00000003972) #28	PDE8B (ENSTGUG00000003995) #27	AGGF1 (ENSTGUG00000004021) #25	CRHBP (ENSTGUG00000004054) #24	ENSTGUG00000004076	IQGAP2 (ENSTGUG00000004085) #20	F2RL2 (ENSTGUG00000004113) #19	SV2C (ENSTGUG00000004114) #18	ENSTGUG00000024790	POLK (ENSTGUG00000006177) #14	CERT1 (ENSTGUG00000006135) #13	MED18 (ENSTGUG00000006132)	HMGCR (ENSTGUG00000006083) #12	ENSTGUG00000006074 #11	GCNT4 (ENSTGUG00000006072) #10	FAM169A (ENSTGUG00000006055) #9	NSA2 (ENSTGUG00000006033) #7	GFM2 (ENSTGUG00000005985)	HEXB (ENSTGUG00000005948)	ENC1 (ENSTGUG00000005945)	ARHGEF28 (ENSTGUG00000005929)	UTP15 (ENSTGUG00000005903)
Common canary	MODERN SPECIES	25	CENPH (ENSSCAG00000006479)	ENSSCAG00000006477	CDK7 (ENSSCAG00000006471)	SERINC5 (ENSSCAG00000006465)	ENSSCAG00000005348	MTX3 (ENSSCAG00000005156)	AP3B1 (ENSSCAG00000005147) #31	TBCA (ENSSCAG00000005139) #30	WDR41 (ENSSCAG00000005134) #28	PDE8B (ENSSCAG00000005086) #27	AGGF1 (ENSSCAG00000005040) #25	CRHBP (ENSSCAG00000005029) #24	S100Z (ENSSCAG00000005020) #23	F2RL1 (ENSSCAG00000005013) #22	F2R (ENSSCAG00000005008) #21	F2RL2 (ENSSCAG00000005003) #19	IQGAP2 (ENSSCAG00000004970) #20	SV2C (ENSSCAG00000004946) #18	ENSSCAG00000004934	ANKDD1B (ENSSCAG00000004916) #15	POLK (ENSSCAG00000004901) #14	ENSSCAG00000004892 #13	HMGCR (ENSSCAG00000004885) #12	ENSSCAG00000004870 #11	GCNT4 (ENSSCAG00000004865) #10	ENSSCAG00000004859	FAM169A (ENSSCAG00000004849) #9	NSA2 (ENSSCAG00000004842) #7	GFM2 (ENSSCAG00000004828)	HEXB (ENSSCAG00000004782)	ENC1 (ENSSCAG00000004767)
Medium ground finch	MODERN SPECIES	143	ENSGFOG00000008891	DMGDH (ENSGFOG00000008906) #37	ARSB (ENSGFOG00000009010) #36	LHFPL2 (ENSGFOG00000009025) #34	ENSGFOG00000009028 #33	AP3B1 (ENSGFOG00000009046) #31	ENSGFOG00000009093	WDR41 (ENSGFOG00000009104) #28	PDE8B (ENSGFOG00000009122) #27	AGGF1 (ENSGFOG00000009755) #25	CRHBP (ENSGFOG00000009960) #24	S100Z (ENSGFOG00000009967) #23	F2RL1 (ENSGFOG00000009974) #22	F2R (ENSGFOG00000009977) #21	IQGAP2 (ENSGFOG00000010045) #20	F2RL2 (ENSGFOG00000011362) #19	SV2C (ENSGFOG00000011368) #18
Flycatcher	MODERN SPECIES	561	ENSFALG00000026736	DMGDH (ENSFALG00000009949) #37	ARSB (ENSFALG00000027321) #36	LHFPL2 (ENSFALG00000025830) #34	SCAMP1 (ENSFALG00000009973) #33	AP3B1 (ENSFALG00000009993) #31	TBCA (ENSFALG00000027625) #30	WDR41 (ENSFALG00000010010) #28	PDE8B (ENSFALG00000010015) #27	AGGF1 (ENSFALG00000010018) #25	CRHBP (ENSFALG00000010024) #24	S100Z (ENSFALG00000028933) #23	F2RL1 (ENSFALG00000014541) #22	F2R (ENSFALG00000010030) #21	IQGAP2 (ENSFALG00000010034) #20	F2RL2 (ENSFALG00000026321) #19	SV2C (ENSFALG00000010041) #18	ENSFALG00000010043	POLK (ENSFALG00000010061) #14	CERT1 (ENSFALG00000010073) #13	ENSFALG00000014553	HMGCR (ENSFALG00000010078) #12	ENSFALG00000028313	GCNT4 (ENSFALG00000014564) #10	ENSFALG00000026352	FAM169A (ENSFALG00000027800) #9	NSA2 (ENSFALG00000010090) #7	GFM2 (ENSFALG00000010106)	HEXB (ENSFALG00000010162)	ENC1 (ENSFALG00000014583)	ARHGEF28 (ENSFALG00000010196)
Great tit	MODERN SPECIES	642	DMGDH (ENSPMJG00000016136) #37	ARSB (ENSPMJG00000016137) #36	LHFPL2 (ENSPMJG00000016138) #34	SCAMP1 (ENSPMJG00000016139) #33	AP3B1 (ENSPMJG00000016140) #31	TBCA (ENSPMJG00000016141) #30	OTP (ENSPMJG00000016142) #29	WDR41 (ENSPMJG00000016143) #28	AGGF1 (ENSPMJG00000016144) #25	PDE8B (ENSPMJG00000016145) #27	CRHBP (ENSPMJG00000016147) #24	S100Z (ENSPMJG00000016148) #23	F2RL1 (ENSPMJG00000016149) #22	F2R (ENSPMJG00000016150) #21	IQGAP2 (ENSPMJG00000016151) #20	F2RL2 (ENSPMJG00000016152) #19	SV2C (ENSPMJG00000016153) #18	ENSPMJG00000016154	POLK (ENSPMJG00000016155) #14	ENSPMJG00000016156	CERT1 (ENSPMJG00000016157) #13	MED18 (ENSPMJG00000016158)	HMGCR (ENSPMJG00000016159) #12	ENSPMJG00000016161 #11	GCNT4 (ENSPMJG00000016162) #10	FAM169A (ENSPMJG00000016163) #9	NSA2 (ENSPMJG00000016164) #7	GFM2 (ENSPMJG00000016165)	HEXB (ENSPMJG00000016166)	ENC1 (ENSPMJG00000016167)	ARHGEF28 (ENSPMJG00000016170)
African ostrich	MODERN SPECIES	1070	ENSSCUG00000012912	DMGDH (ENSSCUG00000012911) #37	ARSB (ENSSCUG00000012909) #36	LHFPL2 (ENSSCUG00000012905) #34	SCAMP1 (ENSSCUG00000012902) #33	AP3B1 (ENSSCUG00000012886) #31	ENSSCUG00000012883	TBCA (ENSSCUG00000012882) #30	WDR41 (ENSSCUG00000012878) #28	PDE8B (ENSSCUG00000012877) #27	AGGF1 (ENSSCUG00000012874) #25	CRHBP (ENSSCUG00000012866) #24	S100Z (ENSSCUG00000012861) #23	F2RL1 (ENSSCUG00000012858) #22	F2R (ENSSCUG00000012856) #21	F2RL2 (ENSSCUG00000012855) #19	IQGAP2 (ENSSCUG00000012832) #20	ENSSCUG00000018996	POLK (ENSSCUG00000018995) #14	CERT1 (ENSSCUG00000018994) #13	MED18 (ENSSCUG00000018993)	HMGCR (ENSSCUG00000018992) #12	ENSSCUG00000018991 #11	GCNT4 (ENSSCUG00000018988) #10	FAM169A (ENSSCUG00000018986) #9	NSA2 (ENSSCUG00000018985) #7	GFM2 (ENSSCUG00000018983)	HEXB (ENSSCUG00000018982)	ENC1 (ENSSCUG00000018980)	ARHGEF28 (ENSSCUG00000018975)	UTP15 (ENSSCUG00000018974)
Australian saltwater crocodile	MODERN SPECIES	29	DMGDH (ENSCPRG00005017362) #37	ARSB (ENSCPRG00005017367) #36	LHFPL2 (ENSCPRG00005017371) #34	SCAMP1 (ENSCPRG00005017372) #33	AP3B1 (ENSCPRG00005017376) #31	TBCA (ENSCPRG00005017393) #30	OTP (ENSCPRG00005017395) #29	WDR41 (ENSCPRG00005017397) #28	PDE8B (ENSCPRG00005017420) #27	AGGF1 (ENSCPRG00005017448) #25	CRHBP (ENSCPRG00005017451) #24	S100Z (ENSCPRG00005017455) #23	F2RL1 (ENSCPRG00005000107) #22	F2R (ENSCPRG00005000123) #21	IQGAP2 (ENSCPRG00005000163) #20	F2RL2 (ENSCPRG00005000293) #19	ENSCPRG00005000328	SV2C (ENSCPRG00005000334) #18	ENSCPRG00005000401	ENSCPRG00005000416	ENSCPRG00005000427	ANKDD1B (ENSCPRG00005000445) #15	POLK (ENSCPRG00005000468) #14	CERT1 (ENSCPRG00005000523) #13	MED18 (ENSCPRG00005000551)	HMGCR (ENSCPRG00005000561) #12	ENSCPRG00005000598	GCNT4 (ENSCPRG00005000608) #10	FAM169A (ENSCPRG00005000616) #9	NSA2 (ENSCPRG00005000620) #7	GFM2 (ENSCPRG00005000644)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT00990000214262	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
painted turtle	MODERN SPECIES	695					AP3B1 (ENSCPBG00000004265) #31	TBCA (ENSCPBG00000004229) #30	OTP (ENSCPBG00000004217) #29	WDR41 (ENSCPBG00000004211) #28	PDE8B (ENSCPBG00000001910) #27	AGGF1 (ENSCPBG00000001764) #25	CRHBP (ENSCPBG00000001749) #24	S100Z (ENSCPBG00000001741) #23	F2RL1 (ENSCPBG00000001729) #22	F2R (ENSCPBG00000001721) #21	ENSCPBG00000001716 #20	F2RL2 (ENSCPBG00000001709) #19	ENSCPBG00000001231 #20	SV2C (ENSCPBG00000001171) #18	ENSCPBG00000001139	ANKDD1B (ENSCPBG00000001071) #15	POLK (ENSCPBG00000001045) #14	CERT1 (ENSCPBG00000000976) #13	MED18 (ENSCPBG00000000959)	HMGCR (ENSCPBG00000000934) #12	ENSCPBG00000000893 #11	GCNT4 (ENSCPBG00000000877) #10	FAM169A (ENSCPBG00000000858) #9	NSA2 (ENSCPBG00000000845) #7	GFM2 (ENSCPBG00000000761)	HEXB (ENSCPBG00000000708)	ENC1 (ENSCPBG00000000702)
Three-toed box turtle	MODERN SPECIES	29	DMGDH (ENSTMTG00000019910) #37	ARSB (ENSTMTG00000019924) #36	LHFPL2 (ENSTMTG00000019928) #34	SCAMP1 (ENSTMTG00000019932) #33	AP3B1 (ENSTMTG00000019939) #31	TBCA (ENSTMTG00000019947) #30	OTP (ENSTMTG00000019954) #29	WDR41 (ENSTMTG00000010122) #28	PDE8B (ENSTMTG00000010141) #27	AGGF1 (ENSTMTG00000010202) #25	CRHBP (ENSTMTG00000010221) #24	S100Z (ENSTMTG00000010247) #23	F2RL1 (ENSTMTG00000010266) #22	F2R (ENSTMTG00000010274) #21	IQGAP2 (ENSTMTG00000010288) #20	F2RL2 (ENSTMTG00000010445) #19	ENSTMTG00000010456	SV2C (ENSTMTG00000010477) #18	ENSTMTG00000010519	ENSTMTG00000010543	ANKDD1B (ENSTMTG00000010565) #15	POLK (ENSTMTG00000010623) #14	CERT1 (ENSTMTG00000010650) #13	MED18 (ENSTMTG00000010732)	HMGCR (ENSTMTG00000010742) #12	ENSTMTG00000010801 #11	GCNT4 (ENSTMTG00000010834) #10	FAM169A (ENSTMTG00000010844) #9	NSA2 (ENSTMTG00000010889) #7	ENSTMTG00000010905	GFM2 (ENSTMTG00000010926)
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00390000003122	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00390000003312	ENSGT00940000155305 #12	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005019199	DMGDH (ENSGEVG00005017878) #37	ARSB (ENSGEVG00005017597) #36	LHFPL2 (ENSGEVG00005017571) #34	SCAMP1 (ENSGEVG00005017551) #33	AP3B1 (ENSGEVG00005017453) #31	TBCA (ENSGEVG00005017424) #30	OTP (ENSGEVG00005017397) #29	WDR41 (ENSGEVG00005017322) #28	PDE8B (ENSGEVG00005017191) #27	AGGF1 (ENSGEVG00005017135) #25	CRHBP (ENSGEVG00005017082) #24	S100Z (ENSGEVG00005017053) #23	F2RL1 (ENSGEVG00005017035) #22	F2R (ENSGEVG00005017019) #21	F2RL2 (ENSGEVG00005017004) #19	IQGAP2 (ENSGEVG00005004397) #20	ENSGEVG00005002861	SV2C (ENSGEVG00005002796) #18	ENSGEVG00005002779	ANKDD1B (ENSGEVG00005002744) #15	POLK (ENSGEVG00005002673) #14	CERT1 (ENSGEVG00005002596) #13	MED18 (ENSGEVG00005002570)	HMGCR (ENSGEVG00005002550) #12	ENSGEVG00005002534 #11	GCNT4 (ENSGEVG00005002526) #10	FAM169A (ENSGEVG00005002497) #9	NSA2 (ENSGEVG00005002481) #7	GFM2 (ENSGEVG00005002461)	HEXB (ENSGEVG00005002443)
Abingdon island giant tortoise	MODERN SPECIES	25													S100Z (ENSCABG00000012444) #23	F2RL1 (ENSCABG00000012443) #22	F2R (ENSCABG00000012440) #21	F2RL2 (ENSCABG00000012438) #19	IQGAP2 (ENSCABG00000012321) #20	SV2C (ENSCABG00000012314) #18
Chinese turtle	MODERN SPECIES	769	DMGDH (ENSPSIG00000006338) #37	ENSPSIG00000000958	ARSB (ENSPSIG00000006010) #36	LHFPL2 (ENSPSIG00000006003) #34	SCAMP1 (ENSPSIG00000005353) #33	AP3B1 (ENSPSIG00000015957) #31	TBCA (ENSPSIG00000015832) #30	OTP (ENSPSIG00000015830) #29	WDR41 (ENSPSIG00000015621) #28	PDE8B (ENSPSIG00000014953) #27	AGGF1 (ENSPSIG00000014397) #25	CRHBP (ENSPSIG00000013255) #24	S100Z (ENSPSIG00000013240) #23	F2RL1 (ENSPSIG00000000941) #22	F2R (ENSPSIG00000013235) #21	F2RL2 (ENSPSIG00000000934) #19	ENSPSIG00000012702 #20
Anura	ANCESTRAL SPECIES	9	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT01100000264050	ENSGT00730000111121 #25	ENSGT00390000001362 #24	ENSGT00940000161125 #23	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000170332	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Frog	MODERN SPECIES		lhfpl2 (ENSXETG00000044028) #34	scamp1 (ENSXETG00000000547) #33	ap3b1 (ENSXETG00000030391) #31	tbca (ENSXETG00000016574) #30	otp (ENSXETG00000035719) #29	wdr41 (ENSXETG00000017074) #28	pde8b (ENSXETG00000017075) #27	aggf1 (ENSXETG00000017077) #25	ENSXETG00000047318	s100z (ENSXETG00000017078) #23	crhbp (ENSXETG00000017080) #24	ENSXETG00000043113	f2rl1 (ENSXETG00000001420) #22	ENSXETG00000042651	f2r (ENSXETG00000003338) #21	f2rl2 (ENSXETG00000003340) #19	iqgap2 (ENSXETG00000003339) #20	sv2c (ENSXETG00000030792) #18	poc5 (ENSXETG00000003349)	ankdd1b (ENSXETG00000032144) #15	polk (ENSXETG00000005087) #14	cert1 (ENSXETG00000005085) #13	hmgcr (ENSXETG00000005084) #12	ankrd31 (ENSXETG00000048346)	gcnt4 (ENSXETG00000005081) #10	fam169a (ENSXETG00000031427) #9	nsa2 (ENSXETG00000005077) #7	gfm2 (ENSXETG00000005076)	hexb (ENSXETG00000005075)	enc1 (ENSXETG00000005074)	arhgef28 (ENSXETG00000016824)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000019700	ENSLLEG00000020113	F2RL1 (ENSLLEG00000020148) #22	ENSLLEG00000020238	ENSLLEG00000020275 #21	ENSLLEG00000020309 #21	ENSLLEG00000020343 #21	ENSLLEG00000020439	ENSLLEG00000020543 #21	ENSLLEG00000020608	ENSLLEG00000020688 #21	ENSLLEG00000020858	ENSLLEG00000021005 #21	IQGAP2 (ENSLLEG00000021078) #20	ENSLLEG00000021667	F2RL2 (ENSLLEG00000021686) #19	ENSLLEG00000021727 #18	ENSLLEG00000021825	ENSLLEG00000021842	ENSLLEG00000021871	ENSLLEG00000022196	ANKDD1B (ENSLLEG00000022314) #15	ENSLLEG00000022551 #14	ENSLLEG00000022621 #14	ENSLLEG00000022681	CERT1 (ENSLLEG00000022716) #13	HMGCR (ENSLLEG00000023306) #12	ENSLLEG00000023779	ENSLLEG00000023800	GCNT4 (ENSLLEG00000023871) #10	FAM169A (ENSLLEG00000023890) #9
Coelacanth	MODERN SPECIES	354	ARSB (ENSLACG00000017542) #36	LHFPL2 (ENSLACG00000017142) #34	SCAMP1 (ENSLACG00000016971) #33	AP3B1 (ENSLACG00000016462) #31	TBCA (ENSLACG00000015660) #30	OTP (ENSLACG00000015564) #29	WDR41 (ENSLACG00000014972) #28	PDE8B (ENSLACG00000014400) #27	AGGF1 (ENSLACG00000012448) #25	CRHBP (ENSLACG00000011704) #24	S100Z (ENSLACG00000011069) #23	ENSLACG00000010563 #22	ENSLACG00000022473 #22	ENSLACG00000022384 #22	F2R (ENSLACG00000009553) #21	F2RL2 (ENSLACG00000008066) #19	ENSLACG00000007149 ##20	SV2C (ENSLACG00000000841) #18
Actinopterygii	ANCESTRAL SPECIES	45	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Neopterygii	ANCESTRAL SPECIES	26	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952 #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b #19	ENSGT00940000174521	ENSGT00950000182940.b.b #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.b #13	ENSGT00940000155305 #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721 #10	ENSGT00510000048902.a #9	ENSGT00390000018706 #7	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b
Osteoglossiformes	ANCESTRAL SPECIES	83	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b.d #34	ENSGT00940000157310.j #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.h #21	ENSGT01050000244840.A.b.b #19	ENSGT00950000182940.b.b.h #18	ENSGT00940000164571
Asian bonytongue	MODERN SPECIES	21	ARSB (ENSSFOG00015016765) #36	lhfpl2a (ENSSFOG00015031014) #34	SCAMP1 (ENSSFOG00015016716) #33	AP3B1 (ENSSFOG00015016624) #31	tbca (ENSSFOG00015030159) #30	otpa (ENSSFOG00015016563) #29	wdr41 (ENSSFOG00015016506) #28	PDE8B (ENSSFOG00015016473) #27	aggf1 (ENSSFOG00015016459) #25	crhbp (ENSSFOG00015016445) #24	s100z (ENSSFOG00015016441) #23	ENSSFOG00015016427	ch25hl2 (ENSSFOG00015028366)	f2rl1.1 (ENSSFOG00015016419) #22	F2R (ENSSFOG00015028768) #21	F2RL2 (ENSSFOG00015029501) #19	SV2C (ENSSFOG00015016383) #18	ENSSFOG00015016366	ENSSFOG00015016294 #13	hmgcra (ENSSFOG00015016250) #12	GCNT4 (ENSSFOG00015016238) #10	fam169aa (ENSSFOG00015016217) #9	nsa2 (ENSSFOG00015016191) #7	gfm2 (ENSSFOG00015016059)	hexb (ENSSFOG00015015989)	ENC1 (ENSSFOG00015025627)	ARHGEF28 (ENSSFOG00015015817)	utp15 (ENSSFOG00015015712)	ankra2 (ENSSFOG00015015678)	BTF3 (ENSSFOG00015015647)	foxd1 (ENSSFOG00015030211)
P. kingsleyae	MODERN SPECIES	2	AP3B1 (ENSPKIG00000017939) #31	tbca (ENSPKIG00000018004) #30	otpa (ENSPKIG00000018024) #29	wdr41 (ENSPKIG00000018046) #28	PDE8B (ENSPKIG00000018112) #27	aggf1 (ENSPKIG00000018193) #25	crhbp (ENSPKIG00000018218) #24	s100z (ENSPKIG00000018247) #23	ENSPKIG00000018266	ch25hl2 (ENSPKIG00000018280)	f2rl1.2 (ENSPKIG00000018301) #22	f2rl1.1 (ENSPKIG00000018310) #22	f2rl1.1 (ENSPKIG00000018318) #22	f2rl1.2 (ENSPKIG00000018335) #22	F2R (ENSPKIG00000018365) #21	F2RL2 (ENSPKIG00000018396) #19	SV2C (ENSPKIG00000018429) #18	ENSPKIG00000018484	ENSPKIG00000018516	ENSPKIG00000018585 #13	hmgcra (ENSPKIG00000018702) #12	GCNT4 (ENSPKIG00000018802) #10	FAM169A (ENSPKIG00000018819) #9	nsa2 (ENSPKIG00000018852) #7	gfm2 (ENSPKIG00000018878)	hexb (ENSPKIG00000018938)	ENC1 (ENSPKIG00000019024)	ARHGEF28 (ENSPKIG00000019115)	utp15 (ENSPKIG00000019386)	ankra2 (ENSPKIG00000019426)	ENSPKIG00000019488
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	130	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000156102.r	ENSGT00940000166544	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000155305.a #12	ENSGT00940000155305.b.a #12	ENSGT00940000154742.b	ENSGT00940000162618 #11	ENSGT00940000159721.g #10	ENSGT00510000048902.a.e #9
Otomorpha	ANCESTRAL SPECIES	87	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14
Clupeiformes	ANCESTRAL SPECIES	77	ENSGT01040000240520	ENSGT00390000017819	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000160028	ENSGT00440000033872	ENSGT00390000008802.a.a	ENSGT00940000155290.C	ENSGT00940000160263	ENSGT00390000007153.a.a.a	ENSGT00940000157749	ENSGT00950000183129.b.a	ENSGT00940000154578.B	ENSGT00940000153731.a.a	ENSGT00940000157072.b
Denticle herring	MODERN SPECIES	2	CLIP1 (ENSDCDG00000003198)	DAB2 (ENSDCDG00000003235)	TMEM8B (ENSDCDG00000003254)	ENSDCDG00000003270	tars1 (ENSDCDG00000003540)	tars1 (ENSDCDG00000005012)	tars1 (ENSDCDG00000005031)	tars1 (ENSDCDG00000005042)	gas1a (ENSDCDG00000005053)	dapk1 (ENSDCDG00000005122)	ctsla (ENSDCDG00000005536)	fbp2 (ENSDCDG00000005540)	fbp1a (ENSDCDG00000005541)	f2r (ENSDCDG00000005542) #21	iqgap2 (ENSDCDG00000007179) ##20	F2RL2 (ENSDCDG00000021673) #19	sv2ca (ENSDCDG00000021684) #18	ENSDCDG00000021869	ANKDD1B (ENSDCDG00000021873) #15	POLK (ENSDCDG00000021887) #14	arid3c (ENSDCDG00000021935)	npr3 (ENSDCDG00000021941)	sub1b (ENSDCDG00000021943)	zfr (ENSDCDG00000021959)	mtmr12 (ENSDCDG00000021992)	golph3a (ENSDCDG00000022003)	ENSDCDG00000022019	parp8 (ENSDCDG00000022087)	si:dkey-3h3.3 (ENSDCDG00000023044)	isl1a (ENSDCDG00000023046)	fsta (ENSDCDG00000023050)
Atlantic herring	MODERN SPECIES	23	RASA1 (ENSCHAG00000015296)	cox7c (ENSCHAG00000017092)	EDIL3 (ENSCHAG00000017117)	ENSCHAG00000017275	ENSCHAG00000017305	ENSCHAG00000017328	ENSCHAG00000017352	zgc:110626 (ENSCHAG00000017380)	ENSCHAG00000017394	ENSCHAG00000017404	ENSCHAG00000017416	ENSCHAG00000017446	ssbp2a (ENSCHAG00000017487)	f2r (ENSCHAG00000017689) #21	iqgap2 (ENSCHAG00000017859) ##20	F2RL2 (ENSCHAG00000024845) #19	sv2ca (ENSCHAG00000024866) #18	ENSCHAG00000025021	ANKDD1B (ENSCHAG00000025028) #15	sub1b (ENSCHAG00000025035)	zfr (ENSCHAG00000025045)	mtmr12 (ENSCHAG00000025052)	golph3a (ENSCHAG00000025069)	ENSCHAG00000025076	ENSCHAG00000025095	parp8 (ENSCHAG00000025125)	si:dkey-3h3.3 (ENSCHAG00000025504)	isl1a (ENSCHAG00000025508)	ITGA2 (ENSCHAG00000025526)	fsta (ENSCHAG00000025574)	ndufs4 (ENSCHAG00000025581)
Otophysi	ANCESTRAL SPECIES	20	ENSGT01100000263701	ENSGT00390000017819	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14
Characiphysae	ANCESTRAL SPECIES	36	ENSGT01100000263701	ENSGT00390000017819	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000157242.a.a	ENSGT00530000067979	ENSGT00940000166272	ENSGT00940000164944	ENSGT00940000166263	ENSGT00940000158491.a	ENSGT00940000153352.A	ENSGT00940000166675	ENSGT00940000155949
Channel catfish	MODERN SPECIES	14	lysmd3 (ENSIPUG00000013836)	polr3g (ENSIPUG00000013820)	MBLAC2 (ENSIPUG00000013810)	mef2c (ENSIPUG00000013747)	tmem161b (ENSIPUG00000013679)	ccnh (ENSIPUG00000013612)	rasa1 (ENSIPUG00000013511)	COX7C (ENSIPUG00000013488)	EDIL3 (ENSIPUG00000013455)	hapln1a (ENSIPUG00000013442)	vcan (ENSIPUG00000013420)	ENSIPUG00000013411	zgc:110626 (ENSIPUG00000013386)	ssbp2 (ENSIPUG00000013265)	f2r (ENSIPUG00000013239) #21	F2RL2 (ENSIPUG00000013232) #19	iqgap2 (ENSIPUG00000013096) ##20	sv2c (ENSIPUG00000013042) #18	poc5 (ENSIPUG00000013008)	Ankdd1b (ENSIPUG00000012979) #15	polk (ENSIPUG00000012942) #14	aqp3a (ENSIPUG00000012906)	ENSIPUG00000012892	wdr54 (ENSIPUG00000012842)	rhobtb4 (ENSIPUG00000012733)	ENSIPUG00000012707	rtkn (ENSIPUG00000012641)	smn1 (ENSIPUG00000012580)	hspb11 (ENSIPUG00000012526)	Mccc2 (ENSIPUG00000012419)	ENSIPUG00000012377
Characiphysae_b	ANCESTRAL SPECIES	9	ENSGT01100000263701	ENSGT00390000017819	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000157242.a.a	ENSGT00530000067979	ENSGT00940000166272	ENSGT00940000164944	ENSGT00940000166263	ENSGT00940000158491.a	ENSGT00940000153352.A	ENSGT00940000166675	ENSGT00940000155949
Characoidei	ANCESTRAL SPECIES	35	ENSGT00940000161769.b.b	ENSGT00940000159913.a.b	ENSGT00940000156031.f	ENSGT00940000160879	ENSGT00940000157876.c	ENSGT00940000157995	ENSGT00940000157492.a	ENSGT00940000158144.b	ENSGT00940000159267	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000157242.a.a	ENSGT00530000067979	ENSGT00940000166272	ENSGT00940000164944	ENSGT00940000166263	ENSGT00940000158491.a	ENSGT00940000153352.A	ENSGT00940000166675	ENSGT00940000155949	ENSGT00390000012762.v	ENSGT00940000157861
Red-bellied piranha	MODERN SPECIES	39	ENSPNAG00000013143	ENSPNAG00000013171	arrdc3a (ENSPNAG00000002600)	adgrv1 (ENSPNAG00000002641)	lysmd3 (ENSPNAG00000002649)	polr3g (ENSPNAG00000005454)	mblac2 (ENSPNAG00000013263)	cox7c (ENSPNAG00000002667)	EDIL3 (ENSPNAG00000013308)	HAPLN1 (ENSPNAG00000002713)	ENSPNAG00000013363	ENSPNAG00000013371	zgc:110626 (ENSPNAG00000013387)	ssbp2a (ENSPNAG00000013397)	f2r (ENSPNAG00000013412) #21	F2RL2 (ENSPNAG00000013416) #19	iqgap2 (ENSPNAG00000002783) ##20	sv2ca (ENSPNAG00000013551) #18	ENSPNAG00000002821	ANKDD1B (ENSPNAG00000005016) #15	POLK (ENSPNAG00000013620) #14	aqp3a (ENSPNAG00000013653)	ENSPNAG00000013661	wdr54 (ENSPNAG00000002878)	rhobtb4 (ENSPNAG00000013715)	ENSPNAG00000013772	rtkna (ENSPNAG00000002969)	smn1 (ENSPNAG00000014007)	hspb11 (ENSPNAG00000014017)	mccc2 (ENSPNAG00000014077)	DAB2 (ENSPNAG00000014124)
Mexicana tetra	MODERN SPECIES	26	mef2cb (ENSAMXG00000040877)	tmem161b (ENSAMXG00000037421)	ccnh (ENSAMXG00000014644)	RASA1 (ENSAMXG00000014658)	cox7c (ENSAMXG00000032595)	ENSAMXG00000043082	ENSAMXG00000039110	EDIL3 (ENSAMXG00000035829)	HAPLN1 (ENSAMXG00000042653)	ENSAMXG00000031311	ENSAMXG00000031084	ENSAMXG00000031430	ssbp2a (ENSAMXG00000031820)	f2r (ENSAMXG00000039666) #21	iqgap2 (ENSAMXG00000013577) ##20	F2RL2 (ENSAMXG00000040816) #19	sv2ca (ENSAMXG00000013674) #18	ENSAMXG00000036512	ANKDD1B (ENSAMXG00000031396) #15	POLK (ENSAMXG00000013760) #14	aqp3a (ENSAMXG00000042262)	ENSAMXG00000039267	wdr54 (ENSAMXG00000030513)	rhobtb4 (ENSAMXG00000013839)	ENSAMXG00000013848	rtkna (ENSAMXG00000031391)	smn1 (ENSAMXG00000013884)	mccc2 (ENSAMXG00000013897)	hspb11 (ENSAMXG00000036011)	ENSAMXG00000013953	oxgr1a.2 (ENSAMXG00000025446)
Electric eel	MODERN SPECIES	234								EDIL3 (ENSEEEG00000006898)	hapln1a (ENSEEEG00000006886)	ENSEEEG00000006882	ENSEEEG00000006881	ENSEEEG00000006879	zgc:110626 (ENSEEEG00000006876)	ssbp2a (ENSEEEG00000006875)	f2r (ENSEEEG00000006874) #21	F2RL2 (ENSEEEG00000006873) #19	iqgap2 (ENSEEEG00000004247) ##20	sv2ca (ENSEEEG00000004181) #18	ENSEEEG00000004170	ANKDD1B (ENSEEEG00000004166) #15	ENSEEEG00000004164	POLK (ENSEEEG00000004160) #14	aqp3a (ENSEEEG00000004158)	ENSEEEG00000004157	wdr54 (ENSEEEG00000004155)	rhobtb4 (ENSEEEG00000004153)	ENSEEEG00000004151	rtkna (ENSEEEG00000004147)
Cyprinoidei	ANCESTRAL SPECIES	43	ENSGT01100000263701	ENSGT00390000017819	ENSGT00940000157492.b	ENSGT00390000000672.a.b	ENSGT00390000008634	ENSGT00940000155846	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.b	ENSGT00940000166014	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000165457.b	ENSGT00940000156290.a	ENSGT00390000000113.B	ENSGT01070000253744.b.b.e.a	ENSGT00940000156085	ENSGT00940000154821.b	ENSGT00940000156282.a.a	ENSGT00940000160420	ENSGT00940000156489	ENSGT00940000154886.a.a.e	ENSGT00390000015513.a.b.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	53			ENSGT00940000157492.b.e.b	ENSGT00390000000672.a.b.u	ENSGT00390000008634.l	ENSGT00940000155846.h.a	ENSGT00390000018086.d	ENSGT00940000158144.a.f	ENSGT00940000166906.h	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b.h	ENSGT00940000166014.h	ENSGT00940000164012.C.c	ENSGT00950000183049.E.t.b	ENSGT01050000244840.A.a.b.e.b #21	ENSGT01050000244840.A.b.b.a.a #19	ENSGT00950000183076.a.b.a.b ##20	ENSGT00950000182940.b.b.e.a #18	ENSGT00940000164571.b	ENSGT00940000154170.A #15	ENSGT00940000156667.l #14	ENSGT00940000165457.b.b	ENSGT00940000156290.a.b	ENSGT00390000000113.B.g	ENSGT01070000253744.b.b.e.a.a.b	ENSGT00940000156085.t	ENSGT00940000154821.b.gb	ENSGT00940000156282.a.a.a	ENSGT00940000160420.e	ENSGT00940000156489.a	ENSGT00940000154886.a.a.e.b
Cyprininae_a	ANCESTRAL SPECIES	151							ENSGT00940000158144.a.f	ENSGT00940000166906.h	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b.h	ENSGT00940000166014.h	ENSGT00940000164012.C.c	ENSGT00950000183049.E.t.b	ENSGT01050000244840.A.a.b.e.b #21	ENSGT00950000183076.a.b.a.b ##20	ENSGT01050000244840.A.b.b.a.a #19	ENSGT00950000182940.b.b.e.a #18	ENSGT00940000164571.b	ENSGT00940000156667.l #14	ENSGT00940000156290.a.b	ENSGT00390000000113.B.g	ENSGT01070000253744.b.b.e.a.a.b	ENSGT00940000156085.t	ENSGT00940000154821.b.gb	ENSGT00940000156282.a.a.a	ENSGT00940000160420.e	ENSGT00940000156489.a	ENSGT00940000154886.a.a.e.b	ENSGT00390000015513.a.b.a.d	ENSGT00390000015513.a.a.b.a	ENSGT00940000153321.b.b.v.b
Golden-line barbel	MODERN SPECIES	782								EDIL3 (ENSSGRG00000037876)	hapln1a (ENSSGRG00000037875)	ENSSGRG00000037864	ENSSGRG00000037863	ENSSGRG00000037862	ENSSGRG00000037861	ssbp2a (ENSSGRG00000037837)	f2r (ENSSGRG00000037831) #21	F2RL2 (ENSSGRG00000037829) #19	iqgap2 (ENSSGRG00000032555) ##20	sv2ca (ENSSGRG00000032399) #18	ENSSGRG00000032398
Common carp reference	MODERN SPECIES	15	polr3g (ENSCCRG00000073638)	mblac2 (ENSCCRG00000013675)	mef2cb (ENSCCRG00000033625)	tmem161b (ENSCCRG00000032578)	ccnh (ENSCCRG00000032654)	RASA1 (ENSCCRG00000032728)	EDIL3 (ENSCCRG00000073037)	hapln1a (ENSCCRG00000051272)	ENSCCRG00000054071	ENSCCRG00000070726	ENSCCRG00000025959	ENSCCRG00000041408	ssbp2a (ENSCCRG00000019895)	f2r (ENSCCRG00000019984) #21	iqgap2 (ENSCCRG00000080285) ##20	F2RL2 (ENSCCRG00000041422) #19	sv2ca (ENSCCRG00000041429) #18	ENSCCRG00000041503	POLK (ENSCCRG00000041529) #14	ENSCCRG00000060599	slc4a4a (ENSCCRG00000009148)	gc (ENSCCRG00000001110)	NPFFR2 (ENSCCRG00000028360)	adamts3 (ENSCCRG00000052924)	smarca2 (ENSCCRG00000055138)	dmrt2a (ENSCCRG00000061986)	dmrt3a (ENSCCRG00000048607)	dmrt1 (ENSCCRG00000039591)	ENSCCRG00000039510	fbp1a (ENSCCRG00000080555)	fbp2 (ENSCCRG00000073989)
Goldfish	MODERN SPECIES	23	itgb4 (ENSCARG00000040676)	sap30bp (ENSCARG00000040273)	ENSCARG00000040231	dennd2da (ENSCARG00000040081)	ENSCARG00000040074	CEPT1 (ENSCARG00000039926)	kif2a (ENSCARG00000038449)	EDIL3 (ENSCARG00000038230)	hapln1a (ENSCARG00000038212)	ENSCARG00000038141	ENSCARG00000038118	ENSCARG00000038071	ssbp2a (ENSCARG00000036772)	f2r (ENSCARG00000036706) #21	ENSCARG00000036686	F2RL2 (ENSCARG00000036677) #19	iqgap2 (ENSCARG00000026236) ##20	sv2ca (ENSCARG00000025726) #18	ENSCARG00000025709	ANKDD1B (ENSCARG00000025684) #15	POLK (ENSCARG00000025641) #14	ifngr2 (ENSCARG00000025619)	slc4a4a (ENSCARG00000019161)	ENSCARG00000018907	ENSCARG00000018903	NPFFR2 (ENSCARG00000018894)	adamts3 (ENSCARG00000015706)	smarca2 (ENSCARG00000015308)	dmrt2a (ENSCARG00000015272)	dmrt3a (ENSCARG00000015270)	dmrt1 (ENSCARG00000015111)
Cyprininae	ANCESTRAL SPECIES		ENSGT01100000263701	ENSGT00390000017819.f	ENSGT00940000157492.b.f	ENSGT00390000000672.a.b.v	ENSGT00390000008634.k	ENSGT00940000155846.h.b	ENSGT00390000018086.c	ENSGT00940000158144.a.e	ENSGT00940000166906.g	ENSGT00940000156102.q.b.g	ENSGT00940000166014.g	ENSGT00940000164012.C.d	ENSGT00950000183049.E.t.a	ENSGT01050000244840.A.a.b.e.a #21	ENSGT00950000183076.a.b.a.a ##20	ENSGT01050000244840.A.b.b.a.b #19	ENSGT00950000182940.b.b.e.b #18	ENSGT00940000164571.a	ENSGT00940000156667.k #14	ENSGT00940000165457.b.a	ENSGT00940000156290.a.a	ENSGT00390000000113.B.h	ENSGT01070000253744.b.b.e.a.a.a	ENSGT00940000156085.s	ENSGT00940000154821.b.fb	ENSGT00940000156282.a.a.b	ENSGT00940000160420.f	ENSGT00940000156489.b	ENSGT00940000154886.a.a.e.a	ENSGT00390000015513.a.b.a.c	ENSGT00390000015513.a.a.b.b
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000155411.c.m.b	ENSGT00940000158711.c	ENSGT00390000017819.e	ENSGT00940000157492.b.e.a	ENSGT00390000000672.a.b.v	ENSGT00390000008634.k	ENSGT00940000155846.h.b	ENSGT00390000018086.c	ENSGT00940000166906.g	ENSGT00940000156102.q.b.g	ENSGT00940000166014.g	ENSGT00940000164012.C.d	ENSGT00950000183049.E.t.a	ENSGT01050000244840.A.a.b.e.a #21	ENSGT00950000183076.a.b.a.a ##20	ENSGT01050000244840.A.b.b.a.b #19	ENSGT00950000182940.b.b.e.b #18	ENSGT00940000164571.a	ENSGT00940000156667.k #14	ENSGT00940000165457.b.a	ENSGT00940000156290.a.a	ENSGT00390000000113.B.h	ENSGT01070000253744.b.b.e.a.a.a	ENSGT00940000156085.s	ENSGT00940000154821.b.fb	ENSGT00940000156282.a.a.b	ENSGT00940000160420.f	ENSGT00940000156489.b	ENSGT00940000154886.a.a.e.a	ENSGT00390000015513.a.b.a.c	ENSGT00390000015513.a.a.b.b
Common carp reference	MODERN SPECIES	7	mblac2 (ENSCCRG00000076340)	mef2cb (ENSCCRG00000066685)	tmem161b (ENSCCRG00000062471)	ccnh (ENSCCRG00000032476)	RASA1 (ENSCCRG00000032499)	ENSCCRG00000055250	COX7C (ENSCCRG00000030424)	EDIL3 (ENSCCRG00000025530)	hapln1a (ENSCCRG00000025988)	ENSCCRG00000025969	ENSCCRG00000025654	ENSCCRG00000067008	ssbp2a (ENSCCRG00000025930)	f2r (ENSCCRG00000025914) #21	iqgap2 (ENSCCRG00000080066) ##20	F2RL2 (ENSCCRG00000025911) #19	sv2ca (ENSCCRG00000017476) #18	ENSCCRG00000044683	POLK (ENSCCRG00000065827) #14	ifngr2 (ENSCCRG00000044672)	slc4a4a (ENSCCRG00000028529)	gc (ENSCCRG00000028390)	NPFFR2 (ENSCCRG00000075865)	adamts3 (ENSCCRG00000072701)	ENSCCRG00000078663	smarca2 (ENSCCRG00000032681)	dmrt2a (ENSCCRG00000032696)	dmrt3a (ENSCCRG00000032698)	dmrt1 (ENSCCRG00000032706)	ENSCCRG00000032839	fbp1a (ENSCCRG00000061213)
Goldfish	MODERN SPECIES	2534								EDIL3 (ENSCARG00000052956)	hapln1a (ENSCARG00000053001)	ENSCARG00000053040	ENSCARG00000053116	ENSCARG00000053127	ssbp2a (ENSCARG00000053143)	f2r (ENSCARG00000053236) #21	iqgap2 (ENSCARG00000053891) ##20	F2RL2 (ENSCARG00000068237) #19	POLK (ENSCARG00000068242) #14	ifngr2 (ENSCARG00000068252)
Zebrafish	MODERN SPECIES	20	mblac2 (ENSDARG00000059689)	mef2cb (ENSDARG00000009418)	tmem161b (ENSDARG00000055989)	ENSDARG00000067658	ccnh (ENSDARG00000007657)	RASA1 (ENSDARG00000035535)	cox7c (ENSDARG00000104537)	EDIL3 (ENSDARG00000093413)	hapln1a (ENSDARG00000089769)	ENSDARG00000103515	ENSDARG00000098013	si:ch211-130m23.2 (ENSDARG00000095136)	zgc:110626 (ENSDARG00000053159)	ssbp2a (ENSDARG00000057395)	f2r (ENSDARG00000060012) #21	F2RL2 (ENSDARG00000090524) #19	iqgap2 (ENSDARG00000060010) ##20	sv2ca (ENSDARG00000059997) #18	ENSDARG00000059982	ANKDD1B (ENSDARG00000025866) #15	POLK (ENSDARG00000059963) #14	ifngr2 (ENSDARG00000067795)	slc4a4a (ENSDARG00000013730)	gc (ENSDARG00000089310)	NPFFR2 (ENSDARG00000033635)	adamts3 (ENSDARG00000060127)	smarca2 (ENSDARG00000008904)	dmrt2a (ENSDARG00000015072)	dmrt3a (ENSDARG00000035290)	dmrt1 (ENSDARG00000007349)	ENSDARG00000060102
Euteleosteomorpha	ANCESTRAL SPECIES	32	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000166544.b	ENSGT00940000156102.q.a.a	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C	ENSGT00950000183049.E	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00980000202325	ENSGT00390000017443	ENSGT01030000234573.A.b.b.b.k
Protacanthopterygii	ANCESTRAL SPECIES	78	ENSGT01100000263793	ENSGT00390000001618.s	ENSGT00390000000378.d.b	ENSGT00940000156918	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a	ENSGT00950000182937.A.b	ENSGT00940000158930	ENSGT00940000162822	ENSGT00950000183166.a.b	ENSGT00550000074856.c.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00980000202325	ENSGT00390000017443	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	13	ENSGT00990000213100	ENSGT00390000002511	ENSGT00390000002408.s	ENSGT00390000009662.h	ENSGT00940000161769.b.a.x.b	ENSGT00940000164668.i	ENSGT00940000159913.a.a.k.b.a.a	ENSGT00940000177458	ENSGT00940000159913.a.a.k.b.b	ENSGT00530000064244.b.f	ENSGT00940000159772.n	ENSGT00940000155355.`b	ENSGT00530000063113.A.r	ENSGT00510000050125.b.b.a	ENSGT00950000183076.a.b.a.c ##20	ENSGT01050000244840.A.b.b.a.c #19	ENSGT00950000182940.b.b.e.c #18	ENSGT00940000164571	ENSGT00940000154170.A.d #15	ENSGT00940000156667.o.b #14	ENSGT00940000155123.a.c.a ##13	ENSGT00940000156639.c.c	ENSGT00940000157654.g	ENSGT00940000155570.s.g	ENSGT00390000017443.nb.b	ENSGT01030000234573.A.b.b.b.k.c	ENSGT00940000158739.c.c	ENSGT00940000157368.m.g	ENSGT00950000182919.B.b	ENSGT00940000155227.b	ENSGT01030000234623.a.b.a.i.a
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT00390000000378.d.b.vb	ENSGT00390000003682.e	ENSGT01030000234626.D.c	ENSGT00390000002511	ENSGT00390000002408.s	ENSGT00390000009662.h	ENSGT00940000161769.b.a.x.b	ENSGT00940000164668.i	ENSGT00940000159913.a.a.k.b.a.a	ENSGT00530000064244.b.f	ENSGT00940000159772.n	ENSGT00940000155355.`b	ENSGT00530000063113.A.r	ENSGT00510000050125.b.b.a	ENSGT00950000183076.a.b.a.c ##20	ENSGT01050000244840.A.b.b.a.c #19	ENSGT00950000182940.b.b.e.c #18	ENSGT00940000164571	ENSGT00940000154170.A.d #15	ENSGT00940000156667.o.b #14	ENSGT00940000155123.a.c.a ##13	ENSGT00940000156639.c.c	ENSGT00940000157654.g	ENSGT00940000155570.s.g	ENSGT00390000017443.nb.b	ENSGT01030000234573.A.b.b.b.k.c	ENSGT00940000158739.c.c	ENSGT00940000157368.m.g	ENSGT00950000182919.B.b.e	ENSGT00940000155227.b	ENSGT01030000234623.a.b.a.i.a
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000156918.i	ENSGT00390000000378.d.b.vb	ENSGT00390000003682.e	ENSGT01030000234626.D.c	ENSGT00390000002511	ENSGT00390000002408.s	ENSGT00390000009662.h	ENSGT00940000161769.b.a.x.b	ENSGT00940000164668.i	ENSGT00940000159913.a.a.k.b.a.a	ENSGT00530000064244.b.f	ENSGT00940000159772.n	ENSGT00940000155355.`b	ENSGT00530000063113.A.r	ENSGT00510000050125.b.b.a	ENSGT01050000244840.A.b.b.a.c #19	ENSGT00950000183076.a.b.a.c ##20	ENSGT00950000182940.b.b.e.c #18	ENSGT00940000164571	ENSGT00940000154170.A.d #15	ENSGT00940000156667.o.b #14	ENSGT00940000155123.a.c.a ##13	ENSGT00940000156639.c.c	ENSGT00940000177329	ENSGT00940000157654.g	ENSGT00940000155570.s.g	ENSGT00390000017443.nb.b	ENSGT01030000234573.A.b.b.b.k.c	ENSGT00940000158739.c.c	ENSGT00940000157368.m.g	ENSGT00950000182919.B.b.e
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000156918.i	ENSGT00390000000378.d.b.vb	ENSGT00390000003682.e	ENSGT01030000234626.D.c	ENSGT00390000002511	ENSGT00390000002408.s	ENSGT00390000009662.h	ENSGT00940000161769.b.a.x.b	ENSGT00940000164668.i	ENSGT00940000159913.a.a.k.b.a.a	ENSGT00530000064244.b.f	ENSGT00940000159772.n	ENSGT00940000155355.`b	ENSGT00530000063113.A.r	ENSGT00510000050125.b.b.a	ENSGT01050000244840.A.b.b.a.c #19	ENSGT00950000183076.a.b.a.c ##20	ENSGT00950000182940.b.b.e.c #18	ENSGT00940000164571	ENSGT00940000154170.A.d #15	ENSGT00940000156667.o.b #14	ENSGT00940000155123.a.c.a ##13	ENSGT00940000156639.c.c	ENSGT00940000177329	ENSGT00940000157654.g	ENSGT00940000155570.s.g	ENSGT00390000017443.nb.b	ENSGT01030000234573.A.b.b.b.k.c	ENSGT00940000158739.c.c	ENSGT00940000157368.m.g	ENSGT00950000182919.B.b.e
Chinook salmon	MODERN SPECIES	28	dynll1 (ENSOTSG00005019408)	rpl6 (ENSOTSG00005019406)	ENSOTSG00005019403	si:ch211-51h9.6 (ENSOTSG00005019401)	ufd1l (ENSOTSG00005019399)	cdc45 (ENSOTSG00005019387)	cldn5a (ENSOTSG00005019383)	zgc:63587 (ENSOTSG00005019277)	septin5a (ENSOTSG00005019269)	gp1bb (ENSOTSG00005019267)	ENSOTSG00005019266	PLPP5 (ENSOTSG00005019265)	NSD3 (ENSOTSG00005015431)	ergic2 (ENSOTSG00005015406)	ENSOTSG00005015404	F2RL2 (ENSOTSG00005015402) #19	iqgap2 (ENSOTSG00005009278) ##20	sv2ca (ENSOTSG00005009265) #18	ENSOTSG00005009264	ANKDD1B (ENSOTSG00005009263) #15	POLK (ENSOTSG00005009250) #14	cert1a (ENSOTSG00005008310) ##13	pip5k1bb (ENSOTSG00005008267)	ENSOTSG00005008265	unc45b (ENSOTSG00005006507)	kif2a (ENSOTSG00005005596)	mrps36 (ENSOTSG00005005586)	mier3b (ENSOTSG00005005564)	plk2b (ENSOTSG00005005164)	rab3c (ENSOTSG00005005158)	mtx3 (ENSOTSG00005005156)
Coho salmon	MODERN SPECIES	22	PLAT (ENSOKIG00005024020)	ENSOKIG00005023790	C22orf39 (ENSOKIG00005023705)	ufd1l (ENSOKIG00005023581)	cdc45 (ENSOKIG00005023527)	cldn5a (ENSOKIG00005023513)	zgc:63587 (ENSOKIG00005023019)	septin5a (ENSOKIG00005022836)	ENSOKIG00005022776	septin5a (ENSOKIG00005022688)	ENSOKIG00005022648	PLPP5 (ENSOKIG00005022620)	NSD3 (ENSOKIG00005020763)	ergic2 (ENSOKIG00005020630)	ENSOKIG00005020621	F2RL2 (ENSOKIG00005020616) #19	iqgap2 (ENSOKIG00005012731) ##20	sv2ca (ENSOKIG00005012235) #18	ENSOKIG00005012214	ANKDD1B (ENSOKIG00005012196) #15	POLK (ENSOKIG00005012062) #14	cert1a (ENSOKIG00005011087) ##13	pip5k1bb (ENSOKIG00005010971)	ENSOKIG00005010940	unc45b (ENSOKIG00005010625)	KIF2A (ENSOKIG00005008773)	mrps36 (ENSOKIG00005008661)	mier3b (ENSOKIG00005008115)	plk2b (ENSOKIG00005007959)	rab3c (ENSOKIG00005007928)	mtx3 (ENSOKIG00005007911)
Rainbow trout	MODERN SPECIES	27	polb (ENSOMYG00000046563)	dynll1 (ENSOMYG00000046543)	rpl6 (ENSOMYG00000046537)	acaa2 (ENSOMYG00000046504)	si:ch211-51h9.6 (ENSOMYG00000026476)	ufd1l (ENSOMYG00000046428)	ENSOMYG00000049749	cldn5a (ENSOMYG00000046403)	zgc:63587 (ENSOMYG00000046400)	septin5a (ENSOMYG00000046286)	gp1bb (ENSOMYG00000046227)	ENSOMYG00000046219	ENSOMYG00000042332	ENSOMYG00000046207	ENSOMYG00000046199	F2RL2 (ENSOMYG00000046194) #19	iqgap2 (ENSOMYG00000042832) ##20	sv2ca (ENSOMYG00000059427) #18	ENSOMYG00000042308	ANKDD1B (ENSOMYG00000042299) #15	POLK (ENSOMYG00000042033) #14	ENSOMYG00000041961 ##13	ENSOMYG00000062156	ENSOMYG00000053346	ENSOMYG00000041931	ENSOMYG00000041918	ENSOMYG00000040246	ENSOMYG00000053572	ENSOMYG00000036932	mrps36 (ENSOMYG00000036667)	mier3b (ENSOMYG00000036481)
Salmo	ANCESTRAL SPECIES		ENSGT00390000000378.d.b.vb	ENSGT00390000003682.e	ENSGT01030000234626.D.c	ENSGT00390000002511	ENSGT00390000002408.s	ENSGT00390000009662.h	ENSGT00940000161769.b.a.x.b	ENSGT00940000164668.i	ENSGT00940000159913.a.a.k.b.b	ENSGT00530000064244.b.f	ENSGT00940000159772.n	ENSGT00940000155355.`b	ENSGT00530000063113.A.r	ENSGT00510000050125.b.b.a	ENSGT00950000183076.a.b.a.c ##20	ENSGT01050000244840.A.b.b.a.c #19	ENSGT00950000182940.b.b.e.c #18	ENSGT00940000164571	ENSGT00940000154170.A.d #15	ENSGT00940000156667.o.b #14	ENSGT00940000155123.a.c.a ##13	ENSGT00940000156639.c.c	ENSGT00940000157654.g	ENSGT00940000155570.s.g	ENSGT00980000202325	ENSGT00390000017443.nb.b	ENSGT01030000234573.A.b.b.b.k.c	ENSGT00940000158739.c.c	ENSGT00940000157368.m.g	ENSGT00950000182919.B.b.e	ENSGT00940000155227.b
River trout	MODERN SPECIES	19	ENSSTUG00000038564	ENSSTUG00000038678	si:ch211-51h9.6 (ENSSTUG00000038700)	ufd1l (ENSSTUG00000038723)	cdc45 (ENSSTUG00000038872)	ENSSTUG00000038902	cldn5a (ENSSTUG00000038912)	zgc:63587 (ENSSTUG00000038940)	septin5a (ENSSTUG00000039468)	gp1bb (ENSSTUG00000040223)	PLPP5 (ENSSTUG00000040232)	NSD3 (ENSSTUG00000040279)	ergic2 (ENSSTUG00000042117)	ENSSTUG00000042424	iqgap2 (ENSSTUG00000043073) ##20	F2RL2 (ENSSTUG00000048945) #19	sv2ca (ENSSTUG00000048949) #18	ENSSTUG00000048967	ANKDD1B (ENSSTUG00000048973) #15	POLK (ENSSTUG00000048983) #14	cert1a (ENSSTUG00000049123) ##13	pip5k1bb (ENSSTUG00000049588)	unc45b (ENSSTUG00000049627)	kif2a (ENSSTUG00000049841)	ENSSTUG00000049971	mrps36 (ENSSTUG00000049973)	mier3b (ENSSTUG00000050001)	plk2b (ENSSTUG00000050039)	rab3c (ENSSTUG00000050055)	mtx3 (ENSSTUG00000050058)	thbs4a (ENSSTUG00000050092)
Atlantic salmon	MODERN SPECIES	16	THIM (ENSSSAG00000046443)	si:ch211-51h9.6 (ENSSSAG00000090823)	ufd1l (ENSSSAG00000046858)	cdc45 (ENSSSAG00000047454)	cldn5a (ENSSSAG00000110113)	zgc:63587 (ENSSSAG00000047646)	septin5a (ENSSSAG00000108161)	gp1bb (ENSSSAG00000053815)	ENSSSAG00000118248	ppc1a (ENSSSAG00000053818)	ENSSSAG00000118354	ENSSSAG00000053931	ergi2 (ENSSSAG00000058116)	iqgap2 (ENSSSAG00000058470) ##20	ENSSSAG00000058130	F2RL2 (ENSSSAG00000066044) #19	sv2ca (ENSSSAG00000076170) #18	ENSSSAG00000066092	POLK (ENSSSAG00000066117) #14	ENSSSAG00000066586 ##13	ENSSSAG00000066682	ENSSSAG00000066805	ENSSSAG00000069329	ENSSSAG00000109140	RT36 (ENSSSAG00000071279)	ENSSSAG00000071281	mier3b (ENSSSAG00000093984)	plk2b (ENSSSAG00000087539)	ENSSSAG00000084512	rab3c (ENSSSAG00000097007)	thbs4a (ENSSSAG00000071963)
Huchen	MODERN SPECIES	480										gp1bb (ENSHHUG00000037240)	plpp5 (ENSHHUG00000037250)	NSD3 (ENSHHUG00000037265)	ergic2 (ENSHHUG00000037394)	ENSHHUG00000037414	iqgap2 (ENSHHUG00000037422) ##20	F2RL2 (ENSHHUG00000038316) #19	sv2ca (ENSHHUG00000038326) #18	ENSHHUG00000038347	ANKDD1B (ENSHHUG00000038357) #15	POLK (ENSHHUG00000038364) #14	cert1a (ENSHHUG00000038389) ##13	pip5k1bb (ENSHHUG00000038809)	unc45b (ENSHHUG00000038850)	kif2a (ENSHHUG00000039229)	mrps36 (ENSHHUG00000039396)	mier3b (ENSHHUG00000039420)	rab3c (ENSHHUG00000039489)	plk2b (ENSHHUG00000039496)	mtx3 (ENSHHUG00000039553)	thbs4a (ENSHHUG00000039581)	serinc5 (ENSHHUG00000040291)
Salmoninae	ANCESTRAL SPECIES	77	ENSGT00390000001618.s	ENSGT00940000156918.j	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a.f	ENSGT00950000182937.A.b.g	ENSGT00940000158930.f	ENSGT00940000159038.a.a.d	ENSGT00940000162822	ENSGT00940000155715.nb.a	ENSGT00950000183166.a.b.f	ENSGT00550000074856.c.b.f.b.b	ENSGT00940000164012.B	ENSGT00950000183049.E.c	ENSGT00510000050125.b.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000183076.a.b.a.d ##20	ENSGT00950000182940.b.b.e.d #18	ENSGT00940000154170.A.c #15	ENSGT00940000156667.o.a #14	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156639.c.d	ENSGT00940000157654.h	ENSGT00940000155570.s.h	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000017443.nb.a	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000158739.c.d	ENSGT00390000014771.b.b
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00390000001618.s	ENSGT00390000000378.d.b.wb	ENSGT00940000156918.j	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a.f	ENSGT00950000182937.A.b.g	ENSGT00940000158930.f	ENSGT00940000159038.a.a.d	ENSGT00940000162822	ENSGT00950000183166.a.b.f	ENSGT00550000074856.c.b.f.b.b	ENSGT00940000164012.B	ENSGT00950000183049.E.c	ENSGT00510000050125.b.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000183076.a.b.a.d ##20	ENSGT00950000182940.b.b.e.d #18	ENSGT00940000154170.A.c #15	ENSGT00940000156667.o.a #14	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156639.c.d	ENSGT00940000157654.h	ENSGT00940000155570.s.h	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000017443.nb.a	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000158739.c.d	ENSGT00390000014771.b.b
Salmo	ANCESTRAL SPECIES	19	ENSGT00390000001618.s	ENSGT00390000000378.d.b.wb	ENSGT00940000156918.j	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a.f	ENSGT00950000182937.A.b.g	ENSGT00940000158930.f	ENSGT00940000159038.a.a.d	ENSGT00940000162822.c	ENSGT00950000183166.a.b.f	ENSGT00550000074856.c.b.f.b.b	ENSGT00940000164012.B	ENSGT00950000183049.E.c	ENSGT00510000050125.b.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000183076.a.b.a.d ##20	ENSGT00950000182940.b.b.e.d #18	ENSGT00940000154170.A.c #15	ENSGT00940000156667.o.a.a.a #14	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156639.c.d	ENSGT00940000157654.h	ENSGT00940000155570.s.h	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000017443.nb.a	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000158739.c.d	ENSGT00390000014771.b.b
Atlantic salmon	MODERN SPECIES	12	polb (ENSSSAG00000045962)	enkd1 (ENSSSAG00000045950)	ENSSSAG00000045940	vdac3 (ENSSSAG00000045635)	ikbkb (ENSSSAG00000045104)	ENSSSAG00000080273	ENSSSAG00000080266	ENSSSAG00000116451	ENSSSAG00000042487	ENSSSAG00000118287	ENSSSAG00000091439	ENSSSAG00000079540	ssbp2a (ENSSSAG00000079361)	f2r (ENSSSAG00000079339) #21	ENSSSAG00000079344	F2RL2 (ENSSSAG00000079337) #19	iqgap2 (ENSSSAG00000076293) ##20	sv2ca (ENSSSAG00000066054) #18	ANKDD1B (ENSSSAG00000076161) #15	ENSSSAG00000105950 #14	ENSSSAG00000091328 #14	ENSSSAG00000081888 #14	ENSSSAG00000075092 ##13	ENSSSAG00000075021	ENSSSAG00000074349	ENSSSAG00000072496	dimt1l (ENSSSAG00000072447)	cenph (ENSSSAG00000112366)	mrps36 (ENSSSAG00000072443)	mier3b (ENSSSAG00000072428)	plk2b (ENSSSAG00000093106)
River trout	MODERN SPECIES	39	polb (ENSSTUG00000047986)	enkd1 (ENSSTUG00000047975)	ENSSTUG00000047963	ENSSTUG00000047958	vdac3 (ENSSTUG00000047951)	ikbkb (ENSSTUG00000047760)	PLAT (ENSSTUG00000047668)	ENSSTUG00000047645	ENSSTUG00000046488	SLC25A1 (ENSSTUG00000046375)	ENSSTUG00000046352	ENSSTUG00000046350	ssbp2a (ENSSTUG00000046136)	ENSSTUG00000046112	f2r (ENSSTUG00000046110) #21	F2RL2 (ENSSTUG00000046100) #19	iqgap2 (ENSSTUG00000033102) ##20	sv2ca (ENSSTUG00000032844) #18	ANKDD1B (ENSSTUG00000032800) #15	POLK (ENSSTUG00000032681) #14	cert1a (ENSSTUG00000032571) ##13	pip5k1bb (ENSSTUG00000032466)	unc45b (ENSSTUG00000031804)	kif2a (ENSSTUG00000031403)	dimt1l (ENSSTUG00000031341)	cenph (ENSSTUG00000031297)	mrps36 (ENSSTUG00000031274)	ENSSTUG00000031264	mier3b (ENSSTUG00000031125)	plk2b (ENSSTUG00000030883)	si:dkey-190g11.3 (ENSSTUG00000030870)
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00390000000378.d.b.wb	ENSGT00390000001618.s	ENSGT00940000156918.j	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a.f	ENSGT00950000182937.A.b.g	ENSGT00940000158930.f	ENSGT00940000159038.a.a.d	ENSGT00950000183166.a.b.f	ENSGT00550000074856.c.b.f.b.b	ENSGT00940000164012.B	ENSGT00950000183049.E.c	ENSGT00510000050125.b.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000182940.b.b.e.d #18	ENSGT00940000154170.A.c #15	ENSGT00940000156667.o.a #14	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156639.c.d	ENSGT00940000157654.h	ENSGT00940000155570.s.h	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000017443.nb.a	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000158739.c.d	ENSGT00390000014771.b.b	ENSGT00940000157368.m.h
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00390000000378.d.b.wb	ENSGT00940000156918.j	ENSGT00940000153866.B	ENSGT00950000182869.e.b.g.a.f	ENSGT00950000182937.A.b.h	ENSGT00950000182937.A.b.g	ENSGT00940000158930.f	ENSGT00940000159038.a.a.d	ENSGT00950000183166.a.b.f	ENSGT00550000074856.c.b.e	ENSGT00940000164012.B	ENSGT00950000183049.E.c	ENSGT00510000050125.b.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a.d ##20	ENSGT01050000244840.A.b.b.a.d #19	ENSGT00950000182940.b.b.e.d #18	ENSGT00940000154170.A.c #15	ENSGT00940000156667.o.a #14	ENSGT00940000155123.a.c.b ##13	ENSGT00940000156639.c.d	ENSGT00940000157654.h	ENSGT00940000155570.s.h	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000017443.nb.a	ENSGT00940000162045.m	ENSGT01030000234573.A.b.b.b.k.d	ENSGT00940000158739.c.d	ENSGT00390000014771.b.b	ENSGT00940000157368.m.h
Coho salmon	MODERN SPECIES	28	ACAA2 (ENSOKIG00005021234)	ENSOKIG00005021362	ENSOKIG00005030971	dynll1 (ENSOKIG00005030993)	polb (ENSOKIG00005031009)	enkd1 (ENSOKIG00005031069)	ikbkb (ENSOKIG00005031084)	PLAT (ENSOKIG00005031157)	MYL11 (ENSOKIG00005031681)	ENSOKIG00005031734	SLC25A1 (ENSOKIG00005032108)	ENSOKIG00005032326	ssbp2a (ENSOKIG00005032358)	f2r (ENSOKIG00005032517) #21	iqgap2 (ENSOKIG00005033003) ##20	F2RL2 (ENSOKIG00005043111) #19	sv2ca (ENSOKIG00005043125) #18	ANKDD1B (ENSOKIG00005043163) #15	POLK (ENSOKIG00005043189) #14	ENSOKIG00005043297 ##13	ENSOKIG00005043722	UNC45B (ENSOKIG00005044260)	ENSOKIG00005045152	kif2a (ENSOKIG00005045320)	dimt1l (ENSOKIG00005046859)	cenph (ENSOKIG00005046876)	mrps36 (ENSOKIG00005046881)	ENSOKIG00005046900	mier3b (ENSOKIG00005046913)	plk2b (ENSOKIG00005046987)	si:dkey-190g11.3 (ENSOKIG00005047054)
Chinook salmon	MODERN SPECIES	3	GPR156 (ENSOTSG00005011159)	LRRC58 (ENSOTSG00005011160)	fstl1b (ENSOTSG00005011162)	ENSOTSG00005011554	ikbkb (ENSOTSG00005011560)	PLAT (ENSOTSG00005011584)	MYL11 (ENSOTSG00005011585)	ENSOTSG00005011587	SLC25A1 (ENSOTSG00005011588)	ENSOTSG00005011589	ssbp2a (ENSOTSG00005011590)	ENSOTSG00005011591	f2r (ENSOTSG00005011592) #21	iqgap2 (ENSOTSG00005011628) ##20	ENSOTSG00005030294	F2RL2 (ENSOTSG00005030295) #19	sv2ca (ENSOTSG00005030297) #18	ANKDD1B (ENSOTSG00005030345) #15	POLK (ENSOTSG00005030353) #14	ENSOTSG00005030366 ##13	pip5k1bb (ENSOTSG00005030677)	unc45b (ENSOTSG00005032234)	kif2a (ENSOTSG00005035478)	dimt1l (ENSOTSG00005040587)	cenph (ENSOTSG00005040601)	mrps36 (ENSOTSG00005040604)	ENSOTSG00005040606	mier3b (ENSOTSG00005040608)	plk2b (ENSOTSG00005040632)	si:dkey-190g11.3 (ENSOTSG00005041747)	rab3c (ENSOTSG00005041759)
Rainbow trout	MODERN SPECIES	2	dynll1 (ENSOMYG00000026005)	ENSOMYG00000026022	polb (ENSOMYG00000025879)	enkd1 (ENSOMYG00000025783)	ENSOMYG00000053738	vdac3 (ENSOMYG00000025689)	ENSOMYG00000024299	ENSOMYG00000059437	ENSOMYG00000023571	ENSOMYG00000070104	ENSOMYG00000022635	ENSOMYG00000022163	ENSOMYG00000022133	ssbp2a (ENSOMYG00000022113)	f2r (ENSOMYG00000022067) #21	F2RL2 (ENSOMYG00000022061) #19	ENSOMYG00000022059	iqgap2 (ENSOMYG00000019870) ##20	sv2ca (ENSOMYG00000019477) #18	ENSOMYG00000076290	ENSOMYG00000063359	ANKDD1B (ENSOMYG00000019440) #15	POLK (ENSOMYG00000019391) #14	ENSOMYG00000017692 ##13	ENSOMYG00000017425	ENSOMYG00000061519	ENSOMYG00000015919	ENSOMYG00000015394	dimt1l (ENSOMYG00000015329)	cenph (ENSOMYG00000015326)	mrps36 (ENSOMYG00000015317)
Northern pike	MODERN SPECIES	12	dynll1 (ENSELUG00000009336)	ENSELUG00000009356	polb (ENSELUG00000009370)	enkd1 (ENSELUG00000009383)	vdac3 (ENSELUG00000009417)	ikbkb (ENSELUG00000009472)	PLAT (ENSELUG00000009537)	ENSELUG00000009557	CLTCL1 (ENSELUG00000009702)	SLC25A1 (ENSELUG00000009778)	ssbp2a (ENSELUG00000009831)	ENSELUG00000027802	ENSELUG00000033572	f2r (ENSELUG00000009872) #21	iqgap2 (ENSELUG00000009998) ##20	F2RL2 (ENSELUG00000009878) #19	sv2ca (ENSELUG00000010070) #18	ENSELUG00000010115	ANKDD1B (ENSELUG00000010168) #15	POLK (ENSELUG00000010184) #14	cert1a (ENSELUG00000010291) ##13	pip5k1bb (ENSELUG00000010355)	unc45b (ENSELUG00000010405)	kif2a (ENSELUG00000010457)	dimt1 (ENSELUG00000010568)	cenph (ENSELUG00000010653)	mrps36 (ENSELUG00000010716)	ENSELUG00000010724	mier3b (ENSELUG00000010763)	plk2b (ENSELUG00000010805)	si:dkey-190g11.3 (ENSELUG00000010831)
Acanthomorphata	ANCESTRAL SPECIES	29	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000165930.B	ENSGT01100000264020	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000156102.q.a.a	ENSGT00940000171478	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Tetraodontidae	ANCESTRAL SPECIES	12	ENSGT00940000166906	ENSGT00940000156102.q.a.a	ENSGT00940000171478	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.p	ENSGT00940000165930.B.o	ENSGT00940000164012.C.i.a	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Fugu	MODERN SPECIES	13	ENSTRUG00000027436	EDIL3 (ENSTRUG00000001909)	hapln1a (ENSTRUG00000002504)	ENSTRUG00000023341	ENSTRUG00000024618	tmem167a (ENSTRUG00000030059)	ENSTRUG00000022193	ENSTRUG00000032284	ENSTRUG00000019858	zgc:110353 (ENSTRUG00000033159)	zgc:110626 (ENSTRUG00000004658)	ENSTRUG00000026429	ssbp2a (ENSTRUG00000005016)	ENSTRUG00000021525	f2r (ENSTRUG00000005062) #21	F2RL2 (ENSTRUG00000006610) #19	iqgap2 (ENSTRUG00000005240) ##20	sv2ca (ENSTRUG00000006668) #18	ENSTRUG00000025429	ANKDD1B (ENSTRUG00000007215) #15	POLK (ENSTRUG00000007363) #14	cert1a (ENSTRUG00000007536) ##13	pip5k1bb (ENSTRUG00000007907)	unc45b (ENSTRUG00000008123)	kif2a (ENSTRUG00000008573)	dimt1l (ENSTRUG00000008885)	cenph (ENSTRUG00000021090)	JMY (ENSTRUG00000009036)	homer1b (ENSTRUG00000009181)	tent2 (ENSTRUG00000021394)	cmya5 (ENSTRUG00000009392)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Ballan wrasse	MODERN SPECIES	378	lysmd3 (ENSLBEG00000022719)	polr3g (ENSLBEG00000022698)	mblac2 (ENSLBEG00000022686)	rtkna (ENSLBEG00000022642)	smn1 (ENSLBEG00000022550)	hspb11 (ENSLBEG00000022523)	LZTS1 (ENSLBEG00000022488)	ENSLBEG00000022457	bco2l (ENSLBEG00000022280)	ela3l (ENSLBEG00000022197)	ENSLBEG00000022183	ENSLBEG00000022168	ssbp2a (ENSLBEG00000022015)	ENSLBEG00000021974	f2r (ENSLBEG00000021961) #21	F2RL2 (ENSLBEG00000021950) #19	iqgap2 (ENSLBEG00000021869) ##20	sv2ca (ENSLBEG00000021805) #18	ENSLBEG00000021761	ANKDD1B (ENSLBEG00000021702) #15	POLK (ENSLBEG00000021611) #14	cert1a (ENSLBEG00000021522) ##13	pip5k1bb (ENSLBEG00000021476)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010024584	ENSSAUG00010024588	tmem167a (ENSSAUG00010000196)	ENSSAUG00010000209	ENSSAUG00010000228	ENSSAUG00010000244	ENSSAUG00010000251	ENSSAUG00010000256	ENSSAUG00010000259	ENSSAUG00010000272	ssbp2a (ENSSAUG00010000334)	ENSSAUG00010000430	ENSSAUG00010000434	f2r (ENSSAUG00010000440) #21	iqgap2 (ENSSAUG00010000602) ##20	F2RL2 (ENSSAUG00010002137) #19	sv2ca (ENSSAUG00010002154) #18	ENSSAUG00010002199	ANKDD1B (ENSSAUG00010002208) #15	POLK (ENSSAUG00010002225) #14	cert1a (ENSSAUG00010002264) ##13	pip5k1bb (ENSSAUG00010002436)	unc45b (ENSSAUG00010002480)	kif2a (ENSSAUG00010005045)	dimt1l (ENSSAUG00010008106)	ENSSAUG00010008120	ENSSAUG00010008121	JMY (ENSSAUG00010008130)	homer1b (ENSSAUG00010008133)	tent2 (ENSSAUG00010008140)	cmya5 (ENSSAUG00010008164)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Large yellow croaker	MODERN SPECIES	2	hapln1a (ENSLCRG00005012841)	ENSLCRG00005012842	ENSLCRG00005012845	tmem167a (ENSLCRG00005012847)	ENSLCRG00005012851	zgc:110353 (ENSLCRG00005012852)	ENSLCRG00005012853	ENSLCRG00005012854	ENSLCRG00005012856	ENSLCRG00005012857	ssbp2a (ENSLCRG00005012862)	ENSLCRG00005013512	f2r (ENSLCRG00005013513) #21	ENSLCRG00005013514	iqgap2 (ENSLCRG00005013527) ##20	F2RL2 (ENSLCRG00005014625) #19	sv2ca (ENSLCRG00005014630) #18	ENSLCRG00005014665	ANKDD1B (ENSLCRG00005014667) #15	POLK (ENSLCRG00005014672) #14	ENSLCRG00005014677 #14	cert1a (ENSLCRG00005014683) ##13	pip5k1bb (ENSLCRG00005014801)	unc45b (ENSLCRG00005014822)	kif2a (ENSLCRG00005016676)	dimt1l (ENSLCRG00005016967)	ENSLCRG00005016971	ENSLCRG00005016972	ENSLCRG00005016974	JMY (ENSLCRG00005016977)	homer1b (ENSLCRG00005016979)
European seabass	MODERN SPECIES	13	EDIL3 (ENSDLAG00005025863)	ENSDLAG00005025860	ENSDLAG00005033012	ENSDLAG00005025855	ENSDLAG00005025851	TMEM167A (ENSDLAG00005026698)	ENSDLAG00005025846	ENSDLAG00005025845	ENSDLAG00005034660	ENSDLAG00005025839	ENSDLAG00005025836	ENSDLAG00005025833	ENSDLAG00005025829	ENSDLAG00005033612	ENSDLAG00005030190	F2RL2 (ENSDLAG00005025793) #19	iqgap2 (ENSDLAG00005025156) ##20	sv2ca (ENSDLAG00005025010) #18	ENSDLAG00005024986	ANKDD1B (ENSDLAG00005024981) #15	POLK (ENSDLAG00005024966) #14	ENSDLAG00005024902 ##13	ENSDLAG00005024885	ENSDLAG00005024568	ENSDLAG00005024318	ENSDLAG00005024208	ENSDLAG00005024190	ENSDLAG00005024166	ENSDLAG00005033007	JMY (ENSDLAG00005028097)	homer1b (ENSDLAG00005024111)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Pike perch	MODERN SPECIES	23	tmem161b (ENSSLUG00000005857)	ccnh (ENSSLUG00000006071)	RASA1 (ENSSLUG00000006142)	cox7c (ENSSLUG00000005215)	EDIL3 (ENSSLUG00000005243)	hapln1a (ENSSLUG00000005315)	ENSSLUG00000005380	ENSSLUG00000005441	tmem167a (ENSSLUG00000005447)	ENSSLUG00000005453	ENSSLUG00000005458	zgc:110626 (ENSSLUG00000005476)	ssbp2a (ENSSLUG00000005602)	f2r (ENSSLUG00000007139) #21	iqgap2 (ENSSLUG00000007830) ##20	F2RL2 (ENSSLUG00000020097) #19	sv2ca (ENSSLUG00000020101) #18	ENSSLUG00000020112	ANKDD1B (ENSSLUG00000020118) #15	POLK (ENSSLUG00000020136) #14	ENSSLUG00000020363 ##13	pip5k1bb (ENSSLUG00000020586)	unc45b (ENSSLUG00000020746)	kif2a (ENSSLUG00000021057)	dimt1l (ENSSLUG00000021807)	ENSSLUG00000021819	ENSSLUG00000021827	JMY (ENSSLUG00000021857)	homer1b (ENSSLUG00000021870)	tent2 (ENSSLUG00000021925)	cmya5 (ENSSLUG00000021947)
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000011385	ENSCGOG00000011389	tmem167a (ENSCGOG00000011391)	ENSCGOG00000011392	ENSCGOG00000011393	zgc:110353 (ENSCGOG00000011394)	ENSCGOG00000011396	ENSCGOG00000011397	ENSCGOG00000011399	ENSCGOG00000011401	ssbp2a (ENSCGOG00000011435)	ENSCGOG00000000456	ENSCGOG00000000466	f2r (ENSCGOG00000000479) #21	iqgap2 (ENSCGOG00000000872) ##20	F2RL2 (ENSCGOG00000003473) #19	sv2ca (ENSCGOG00000003478) #18	ENSCGOG00000003501	ANKDD1B (ENSCGOG00000003504) #15	POLK (ENSCGOG00000003523) #14	ENSCGOG00000003825 ##13	pip5k1bb (ENSCGOG00000005218)	unc45b (ENSCGOG00000006370)	unc45b (ENSCGOG00000006411)	ENSCGOG00000006415	kif2a (ENSCGOG00000006428)	dimt1l (ENSCGOG00000007261)	ENSCGOG00000007690	ENSCGOG00000007696	JMY (ENSCGOG00000007821)	ENSCGOG00000007831
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00390000018086	ENSGT00940000158144.a	ENSGT00940000166906	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Stickleback	MODERN SPECIES	12	tmem161b (ENSGACG00000010257)	ccnh (ENSGACG00000010245)	RASA1 (ENSGACG00000010225)	cox7c (ENSGACG00000010223)	EDIL3 (ENSGACG00000010214)	hapln1a (ENSGACG00000010212)	ENSGACG00000010187	ENSGACG00000010182	zgc:110626 (ENSGACG00000010177)	ENSGACG00000010176	ssbp2a (ENSGACG00000010152)	ENSGACG00000010148	ENSGACG00000010145	ENSGACG00000010141	f2r (ENSGACG00000010138) #21	F2RL2 (ENSGACG00000010134) #19	iqgap2 (ENSGACG00000010070) ##20	sv2ca (ENSGACG00000010037) #18	ENSGACG00000010031	ANKDD1B (ENSGACG00000010026) #15	POLK (ENSGACG00000010020) #14	cert1a (ENSGACG00000010013) ##13	pip5k1bb (ENSGACG00000010008)	ENSGACG00000010004	unc45b (ENSGACG00000009985)	kif2a (ENSGACG00000009965)	dimt1l (ENSGACG00000009941)	ENSGACG00000009937	JMY (ENSGACG00000009930)	homer1b (ENSGACG00000009905)	tent2 (ENSGACG00000009902)
Lumpfish	MODERN SPECIES	24	tmem161b (ENSCLMG00005020778)	ccnh (ENSCLMG00005020776)	RASA1 (ENSCLMG00005020356)	cox7c (ENSCLMG00005020349)	EDIL3 (ENSCLMG00005020348)	hapln1a (ENSCLMG00005020343)	ENSCLMG00005020342	ENSCLMG00005020341	tmem167a (ENSCLMG00005020340)	ENSCLMG00005020339	ENSCLMG00005020338	ENSCLMG00005020337	zgc:110626 (ENSCLMG00005020336)	ssbp2a (ENSCLMG00005019300)	f2r (ENSCLMG00005019280) #21	F2RL2 (ENSCLMG00005019278) #19	iqgap2 (ENSCLMG00005005209) ##20	sv2ca (ENSCLMG00005004960) #18	ENSCLMG00005004952	ANKDD1B (ENSCLMG00005004948) #15	POLK (ENSCLMG00005004946) #14	cert1a (ENSCLMG00005004870) ##13	pip5k1bb (ENSCLMG00005004499)	zgc:101016 (ENSCLMG00005004415)	gda (ENSCLMG00005004261)	si:ch211-214j8.12 (ENSCLMG00005004247)	entpd4 (ENSCLMG00005018186)	slc25a37 (ENSCLMG00005018184)	ENSCLMG00005018182	nkx2.7 (ENSCLMG00005018175)	stc1 (ENSCLMG00005018172)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000165930.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000011767	ENSMAMG00000011814	TMEM167A (ENSMAMG00000011846)	ENSMAMG00000011859	ENSMAMG00000011866	ENSMAMG00000028361	ENSMAMG00000011925	ENSMAMG00000025750	ENSMAMG00000011985	ENSMAMG00000011958	ssbp2a (ENSMAMG00000012000)	ENSMAMG00000012056	ENSMAMG00000026420	f2r (ENSMAMG00000012076) #21	iqgap2 (ENSMAMG00000012097) ##20	F2RL2 (ENSMAMG00000025708) #19	sv2ca (ENSMAMG00000012199) #18	ENSMAMG00000012256	ANKDD1B (ENSMAMG00000012272) #15	POLK (ENSMAMG00000012309) #14	ENSMAMG00000012341 ##13	ENSMAMG00000012414	ENSMAMG00000012455	ENSMAMG00000012692	ENSMAMG00000012758	ENSMAMG00000012782	ENSMAMG00000012872	ENSMAMG00000012929	JMY (ENSMAMG00000012948)	homer1b (ENSMAMG00000012976)	tent2 (ENSMAMG00000013003)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000166906	ENSGT00940000156102.q.a.b	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00950000183049.E	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696	ENSGT00950000182919.B.b
Siamese fighting fish	MODERN SPECIES	20	EDIL3 (ENSBSLG00000001777)	hapln1a (ENSBSLG00000001845)	ENSBSLG00000001859	ENSBSLG00000001901	tmem167a (ENSBSLG00000001903)	ENSBSLG00000001906	ENSBSLG00000001913	ENSBSLG00000001918	ENSBSLG00000001923	ENSBSLG00000001924	ENSBSLG00000001926	ssbp2a (ENSBSLG00000001953)	ENSBSLG00000002036	f2r (ENSBSLG00000002039) #21	iqgap2 (ENSBSLG00000002055) ##20	F2RL2 (ENSBSLG00000002072) #19	sv2ca (ENSBSLG00000002073) #18	ENSBSLG00000002131	ANKDD1B (ENSBSLG00000002159) #15	POLK (ENSBSLG00000002202) #14	cert1a (ENSBSLG00000002561) ##13	ENSBSLG00000003652	unc45b (ENSBSLG00000003772)	unc45b (ENSBSLG00000004012)	kif2a (ENSBSLG00000004414)	dimt1l (ENSBSLG00000004648)	ENSBSLG00000004675	JMY (ENSBSLG00000004682)	homer1b (ENSBSLG00000004691)	tent2 (ENSBSLG00000004694)	cmya5 (ENSBSLG00000004697)
Climbing perch	MODERN SPECIES	22	EDIL3 (ENSATEG00000004002)	ENSATEG00000004006	ENSATEG00000027621	ENSATEG00000004104	ENSATEG00000004128	TMEM167A (ENSATEG00000004151)	ENSATEG00000004172	ENSATEG00000004194	ENSATEG00000004259	ENSATEG00000004225	ssbp2a (ENSATEG00000004291)	ENSATEG00000004380	ENSATEG00000025398	f2r (ENSATEG00000004415) #21	iqgap2 (ENSATEG00000004425) ##20	F2RL2 (ENSATEG00000004583) #19	sv2ca (ENSATEG00000004609) #18	ENSATEG00000004644	ANKDD1B (ENSATEG00000004652) #15	POLK (ENSATEG00000004665) #14	ENSATEG00000004772 ##13	ENSATEG00000004842	ENSATEG00000004852	ENSATEG00000004958	ENSATEG00000005056	ENSATEG00000005098	JMY (ENSATEG00000029857)	homer1b (ENSATEG00000005201)	tent2 (ENSATEG00000005237)	cmya5 (ENSATEG00000005253)	mtx3 (ENSATEG00000005354)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT01100000264020	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Turbot	MODERN SPECIES	21	ENSSMAG00000009177	TMEM167A (ENSSMAG00000009194)	ENSSMAG00000027869	ENSSMAG00000033038	ENSSMAG00000009236	ENSSMAG00000009256	ENSSMAG00000009278	ENSSMAG00000009338	ENSSMAG00000009356	ssbp2a (ENSSMAG00000009366)	ENSSMAG00000009398	ENSSMAG00000009417	ENSSMAG00000027594	f2r (ENSSMAG00000033731) #21	iqgap2 (ENSSMAG00000009436) ##20	F2RL2 (ENSSMAG00000009659) #19	sv2ca (ENSSMAG00000009687) #18	ENSSMAG00000009748	ANKDD1B (ENSSMAG00000009792) #15	POLK (ENSSMAG00000009824) #14	ENSSMAG00000009873 ##13	ENSSMAG00000009937	ENSSMAG00000009995	ENSSMAG00000010059	ENSSMAG00000010122	ENSSMAG00000010188	ENSSMAG00000010154	JMY (ENSSMAG00000010198)	homer1b (ENSSMAG00000010206)	tent2 (ENSSMAG00000010222)	ENSSMAG00000010242
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT01100000264020	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Barramundi perch	MODERN SPECIES	95	ENSLCAG00010027930	ENSLCAG00010027937	tmem167a (ENSLCAG00010027939)	ENSLCAG00010027942	ENSLCAG00010027944	ENSLCAG00010027947	ENSLCAG00010027959	ENSLCAG00010027961	ENSLCAG00010027962	ssbp2a (ENSLCAG00010027964)	ENSLCAG00010027980	ENSLCAG00010027981	ENSLCAG00010027982	f2r (ENSLCAG00010027983) #21	iqgap2 (ENSLCAG00010028019) ##20	F2RL2 (ENSLCAG00010028050) #19	sv2ca (ENSLCAG00010028051) #18	ENSLCAG00010028052	ANKDD1B (ENSLCAG00010028053) #15	POLK (ENSLCAG00010028054) #14	cert1a (ENSLCAG00010028055) ##13	pip5k1bb (ENSLCAG00010028056)	unc45b (ENSLCAG00010028058)	kif2a (ENSLCAG00010028085)	dimt1l (ENSLCAG00010028109)	ENSLCAG00010028110	ENSLCAG00010028111	JMY (ENSLCAG00010028112)	homer1b (ENSLCAG00010028113)	tent2 (ENSLCAG00010028114)	cmya5 (ENSLCAG00010028116)
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a.f	ENSGT01100000264020	ENSGT00940000164012.C.i.a.e	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Greater amberjack	MODERN SPECIES	6	ENSSDUG00000016328	ENSSDUG00000016293	tmem167a (ENSSDUG00000016282)	ENSSDUG00000016276	ENSSDUG00000016266	ENSSDUG00000016255	ENSSDUG00000016240	ENSSDUG00000016187	ENSSDUG00000016171	ENSSDUG00000016157	ssbp2a (ENSSDUG00000016131)	ENSSDUG00000016123	ENSSDUG00000016112	ENSSDUG00000016094	f2r (ENSSDUG00000016084) #21	F2RL2 (ENSSDUG00000016076) #19	iqgap2 (ENSSDUG00000016017) ##20	sv2ca (ENSSDUG00000015984) #18	ENSSDUG00000015960	ANKDD1B (ENSSDUG00000015937) #15	POLK (ENSSDUG00000015878) #14	ENSSDUG00000015802 ##13	pip5k1bb (ENSSDUG00000015733)	unc45b (ENSSDUG00000015695)	kif2a (ENSSDUG00000015538)	dimt1l (ENSSDUG00000015494)	ENSSDUG00000015478	ENSSDUG00000015446	ENSSDUG00000015434	JMY (ENSSDUG00000015420)	homer1b (ENSSDUG00000015395)
Yellowtail amberjack	MODERN SPECIES	2916	hapln1a (ENSSLDG00000005319)	ENSSLDG00000005246	ENSSLDG00000005203	tmem167a (ENSSLDG00000005182)	ENSSLDG00000005167	ENSSLDG00000005139	ENSSLDG00000005112	ENSSLDG00000005095	zgc:110626 (ENSSLDG00000005020)	ENSSLDG00000004981	ssbp2a (ENSSLDG00000004452)	ENSSLDG00000004324	ENSSLDG00000004312	ENSSLDG00000004292	f2r (ENSSLDG00000004302) #21	F2RL2 (ENSSLDG00000004246) #19	iqgap2 (ENSSLDG00000003922) ##20	sv2ca (ENSSLDG00000003873) #18	ENSSLDG00000003836	ANKDD1B (ENSSLDG00000003792) #15	POLK (ENSSLDG00000003774) #14	cert1a (ENSSLDG00000003668) ##13	pip5k1bb (ENSSLDG00000003558)	unc45b (ENSSLDG00000003454)	kif2a (ENSSLDG00000003248)	dimt1l (ENSSLDG00000003157)	ENSSLDG00000003137	ENSSLDG00000003089	ENSSLDG00000003068	homer1b (ENSSLDG00000003016)	tent2 (ENSSLDG00000002992)
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000178644	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Aplocheiloidei	ANCESTRAL SPECIES	24		ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696	ENSGT00950000182919.B.b
Mangrove rivulus	MODERN SPECIES	26	ENSKMAG00000011410	ENSKMAG00000011425	tmem167a (ENSKMAG00000011448)	ENSKMAG00000011474	ENSKMAG00000011487	ENSKMAG00000011514	ENSKMAG00000011528	zgc:110626 (ENSKMAG00000011544)	ENSKMAG00000011577	ssbp2a (ENSKMAG00000011610)	ENSKMAG00000011685	ENSKMAG00000011697	ENSKMAG00000011714	f2r (ENSKMAG00000011736) #21	iqgap2 (ENSKMAG00000011786) ##20	F2RL2 (ENSKMAG00000011888) #19	sv2ca (ENSKMAG00000011909) #18	ENSKMAG00000011941	ANKDD1B (ENSKMAG00000011967) #15	POLK (ENSKMAG00000012000) #14	cert1a (ENSKMAG00000012059) ##13	pip5k1bb (ENSKMAG00000012161)	dimt1l (ENSKMAG00000012211)	kif2a (ENSKMAG00000012298)	unc45b (ENSKMAG00000012488)	ENSKMAG00000012646	JMY (ENSKMAG00000012684)	homer1b (ENSKMAG00000012715)	ENSKMAG00000012731	tent2 (ENSKMAG00000012764)	mtx3 (ENSKMAG00000012812)
Turquoise killifish	MODERN SPECIES	1627	ENSNFUG00015023085	ENSNFUG00015023089	ENSNFUG00015014061	ENSNFUG00015014068	tmem167a (ENSNFUG00015014079)	ENSNFUG00015014089	ENSNFUG00015014101	ENSNFUG00015014113	ENSNFUG00015014139	zgc:110626 (ENSNFUG00015014153)	SSBP2 (ENSNFUG00015014251)	Nfu_g_1_009468 (ENSNFUG00015014441)	OLA.20275 (ENSNFUG00015014455)	F2R (ENSNFUG00015014465) #21	IQGAP2 (ENSNFUG00015014565) ##20	F2RL2 (ENSNFUG00015018384) #19	sv2ca (ENSNFUG00015018393) #18	POC5 (ENSNFUG00015018438)	ANKDD1B (ENSNFUG00015018449) #15	POLK (ENSNFUG00015018463) #14	cert1a (ENSNFUG00015018510) ##13	pip5k1bb (ENSNFUG00015018824)	unc45b (ENSNFUG00015019001)	Nfu_g_1_008917 (ENSNFUG00015020023)	dimt1l (ENSNFUG00015021156)	CENPH (ENSNFUG00015021161)	JMY (ENSNFUG00015021165)	HOMER1 (ENSNFUG00015021178)	ENSNFUG00015021190	PAPD4 (ENSNFUG00015021197)	cmya5 (ENSNFUG00015021213)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000164012.C.i.a.m	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a.a	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000164012.C.i.a.m	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a.a	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c.f	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000164012.C.i.a.m	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a.a	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c.f	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
NAME_6	ANCESTRAL SPECIES	32	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000164012.C.i.a.m	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a.a	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00510000050125.b.b	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c.f.b	ENSGT00940000156639.c.f.a	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Amazon molly	MODERN SPECIES	354					tmem167a (ENSPFOG00000018315)	ENSPFOG00000018313	ENSPFOG00000022290	ENSPFOG00000023016	ENSPFOG00000018301	ENSPFOG00000018293	ssbp2a (ENSPFOG00000018292)	ENSPFOG00000018287	ENSPFOG00000018285	f2r (ENSPFOG00000021748) #21	ENSPFOG00000018283	F2RL2 (ENSPFOG00000018281) #19	iqgap2 (ENSPFOG00000018124) ##20	sv2ca (ENSPFOG00000018083) #18	ENSPFOG00000018064	ANKDD1B (ENSPFOG00000018049) #15	POLK (ENSPFOG00000018013) #14	cert1a (ENSPFOG00000017965) ##13	pip5k1bb (ENSPFOG00000017934)	pip5k1bb (ENSPFOG00000017906)	unc45b (ENSPFOG00000017837)	kif2a (ENSPFOG00000017786)	dimt1l (ENSPFOG00000017743)	ENSPFOG00000017726	JMY (ENSPFOG00000017702)	homer1b (ENSPFOG00000017658)	tent2 (ENSPFOG00000017634)
Sailfin molly	MODERN SPECIES	577							ENSPLAG00000019809	ENSPLAG00000019819	ENSPLAG00000019841	ENSPLAG00000019848	ENSPLAG00000019896	ssbp2a (ENSPLAG00000019971)	ENSPLAG00000000444	ENSPLAG00000020016	f2r (ENSPLAG00000020020) #21	F2RL2 (ENSPLAG00000020031) #19	iqgap2 (ENSPLAG00000020082) ##20	sv2ca (ENSPLAG00000020119) #18	ENSPLAG00000020134	ANKDD1B (ENSPLAG00000020192) #15	POLK (ENSPLAG00000020212) #14	cert1a (ENSPLAG00000020247) ##13	ENSPLAG00000020263
Guppy	MODERN SPECIES	461	ENSPREG00000004208	ENSPREG00000004192	tmem167a (ENSPREG00000004173)	ENSPREG00000004162	ENSPREG00000004147	ENSPREG00000004131	ENSPREG00000004116	ENSPREG00000004089	ENSPREG00000004065	ssbp2a (ENSPREG00000003987)	ENSPREG00000003968	ENSPREG00000003945	ENSPREG00000003937	ENSPREG00000003922	f2r (ENSPREG00000003916) #21	F2RL2 (ENSPREG00000003905) #19	ENSPREG00000003890	iqgap2 (ENSPREG00000003744) ##20	sv2ca (ENSPREG00000003686) #18	ENSPREG00000003643	POLK (ENSPREG00000003558) #14	cert1a (ENSPREG00000003405) ##13	pip5k1bb (ENSPREG00000003315)	ENSPREG00000003300	unc45b (ENSPREG00000003235)	kif2a (ENSPREG00000003137)	dimt1l (ENSPREG00000003097)	ENSPREG00000003052	JMY (ENSPREG00000003035)	homer1b (ENSPREG00000003004)	tent2 (ENSPREG00000002970)
Platyfish	MODERN SPECIES	3	ENSXMAG00000024568	ENSXMAG00000025960	tmem167a (ENSXMAG00000027342)	ENSXMAG00000029021	ENSXMAG00000020919	ENSXMAG00000023025	ENSXMAG00000006755	zgc:110626 (ENSXMAG00000006771)	ENSXMAG00000021171	ssbp2a (ENSXMAG00000006775)	ENSXMAG00000023825	ENSXMAG00000029905	ENSXMAG00000022336	ENSXMAG00000006792	f2r (ENSXMAG00000020238) #21	F2RL2 (ENSXMAG00000026316) #19	iqgap2 (ENSXMAG00000006794) ##20	sv2ca (ENSXMAG00000006957) #18	ENSXMAG00000007002	ANKDD1B (ENSXMAG00000007009) #15	POLK (ENSXMAG00000007018) #14	cert1a (ENSXMAG00000007034) ##13	pip5k1bb (ENSXMAG00000007055)	ENSXMAG00000023476	ENSXMAG00000026507	unc45b (ENSXMAG00000007077)	kif2a (ENSXMAG00000007104)	dimt1l (ENSXMAG00000007137)	ENSXMAG00000007167	JMY (ENSXMAG00000007170)	homer1b (ENSXMAG00000007184)
NAME_4	ANCESTRAL SPECIES	13	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.h	ENSGT00940000164012.C.i.a.n	ENSGT00940000165930.B.g	ENSGT01100000264020	ENSGT00940000164012.C.i.a.m	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a.a	ENSGT00510000050125.b.a.a.b	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00940000174521	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Sheepshead minnow	MODERN SPECIES	215	tmem167a (ENSCVAG00000021817)	ENSCVAG00000021823	ENSCVAG00000021833	ENSCVAG00000021851	ENSCVAG00000021860	zgc:110353 (ENSCVAG00000021876)	ENSCVAG00000021888	zgc:110626 (ENSCVAG00000021907)	ssbp2a (ENSCVAG00000021963)	ENSCVAG00000021973	ENSCVAG00000021982	ENSCVAG00000021992	ENSCVAG00000022005	f2r (ENSCVAG00000022012) #21	ENSCVAG00000022020 ##20	F2RL2 (ENSCVAG00000022027) #19	ENSCVAG00000022037	ENSCVAG00000022051	sv2ca (ENSCVAG00000022091) #18
Mummichog	MODERN SPECIES	2186	tmem167a (ENSFHEG00000007183)	ENSFHEG00000007163	ENSFHEG00000007150	ENSFHEG00000007124	ENSFHEG00000007076	ENSFHEG00000007069	ENSFHEG00000007053	ENSFHEG00000006978	ssbp2a (ENSFHEG00000006960)	ENSFHEG00000006892	ENSFHEG00000006888	ENSFHEG00000006882	ENSFHEG00000006877	f2r (ENSFHEG00000006875) #21	iqgap2 (ENSFHEG00000006863) ##20	F2RL2 (ENSFHEG00000006721) #19	sv2ca (ENSFHEG00000006718) #18	ENSFHEG00000006670	ANKDD1B (ENSFHEG00000006646) #15	POLK (ENSFHEG00000006613) #14	cert1a (ENSFHEG00000006563) ##13	pip5k1bb (ENSFHEG00000006490)	unc45b (ENSFHEG00000006479)	kif2a (ENSFHEG00000006423)	dimt1l (ENSFHEG00000006325)	ENSFHEG00000006246	JMY (ENSFHEG00000006151)	homer1b (ENSFHEG00000006139)	tent2 (ENSFHEG00000006065)	cmya5 (ENSFHEG00000005975)	mtx3 (ENSFHEG00000005904)
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a.o	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.p	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a.o	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.p	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696	ENSGT00950000182919.B.b
Indian medaka	MODERN SPECIES	11	TAAR1 (ENSOMEG00000006144)	ENSOMEG00000006134	tmem167a (ENSOMEG00000000141)	ENSOMEG00000006046	ENSOMEG00000006034	ENSOMEG00000006013	ENSOMEG00000005993	ENSOMEG00000005955	ENSOMEG00000005927	ENSOMEG00000005916	ssbp2a (ENSOMEG00000005892)	ENSOMEG00000005811	ENSOMEG00000005752	f2r (ENSOMEG00000005744) #21	iqgap2 (ENSOMEG00000000123) ##20	F2RL2 (ENSOMEG00000005669) #19	sv2ca (ENSOMEG00000005653) #18	ENSOMEG00000005604	POLK (ENSOMEG00000000965) #14	cert1a (ENSOMEG00000005508) ##13	pip5k1bb (ENSOMEG00000005373)	unc45b (ENSOMEG00000005327)	kif2a (ENSOMEG00000005274)	dimt1l (ENSOMEG00000005237)	ENSOMEG00000005220	JMY (ENSOMEG00000005183)	homer1b (ENSOMEG00000005157)	tent2 (ENSOMEG00000005116)	cmya5 (ENSOMEG00000005068)	mtx3 (ENSOMEG00000004968)	thbs4a (ENSOMEG00000004920)
Javanese ricefish	MODERN SPECIES	23	hapln1a (ENSOJAG00000024106)	ENSOJAG00000024104	ENSOJAG00000024102	tmem167a (ENSOJAG00000024101)	ENSOJAG00000024099	ENSOJAG00000024098	ENSOJAG00000024097	ENSOJAG00000024096	ENSOJAG00000024094	ENSOJAG00000024093	ssbp2a (ENSOJAG00000024079)	ENSOJAG00000024070	ENSOJAG00000024069	ENSOJAG00000024068	f2r (ENSOJAG00000024067) #21	F2RL2 (ENSOJAG00000024065) #19	iqgap2 (ENSOJAG00000023955) ##20	sv2ca (ENSOJAG00000023886) #18	ENSOJAG00000023883	ANKDD1B (ENSOJAG00000023882) #15	POLK (ENSOJAG00000023877) #14	cert1a (ENSOJAG00000023858) ##13	pip5k1bb (ENSOJAG00000023840)	unc45b (ENSOJAG00000023693)	kif2a (ENSOJAG00000023309)	dimt1l (ENSOJAG00000023113)	ENSOJAG00000023099	JMY (ENSOJAG00000023052)	homer1b (ENSOJAG00000023042)	tent2 (ENSOJAG00000023019)	cmya5 (ENSOJAG00000023000)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000164012.C.i.a.o	ENSGT01030000236208	ENSGT00940000165930.B.g	ENSGT00940000164012.C.i.a.p	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Chinese medaka	MODERN SPECIES	528	ENSOSIG00000003759	ENSOSIG00000003741	ENSOSIG00000023866	tmem167a (ENSOSIG00000023865)	ENSOSIG00000023864	ENSOSIG00000023863	ENSOSIG00000023862	ENSOSIG00000023861	ENSOSIG00000023860	ENSOSIG00000023859	ssbp2a (ENSOSIG00000023827)	ENSOSIG00000023763	ENSOSIG00000023762	ENSOSIG00000023760	f2r (ENSOSIG00000023758) #21	F2RL2 (ENSOSIG00000023757) #19	iqgap2 (ENSOSIG00000023610) ##20	ENSOSIG00000023487	ANKDD1B (ENSOSIG00000023485) #15	POLK (ENSOSIG00000023445) #14	cert1a (ENSOSIG00000023244) ##13	pip5k1bb (ENSOSIG00000023168)	unc45b (ENSOSIG00000022958)	kif2a (ENSOSIG00000022348)	dimt1l (ENSOSIG00000022231)	ENSOSIG00000022216	JMY (ENSOSIG00000022211)	homer1b (ENSOSIG00000022206)	tent2 (ENSOSIG00000022187)	cmya5 (ENSOSIG00000022166)	mtx3 (ENSOSIG00000022162)
Japanese Medaka HdrR	MODERN SPECIES	23	ENSORLG00000024087	ENSORLG00000009844	tmem167a (ENSORLG00000009841)	ENSORLG00000009836	ENSORLG00000024968	ENSORLG00000025317	ENSORLG00000025971	ENSORLG00000024762	zgc:110626 (ENSORLG00000009825)	ENSORLG00000030513	ssbp2a (ENSORLG00000009816)	ENSORLG00000009786	ENSORLG00000009780	ENSORLG00000009771	f2r (ENSORLG00000009766) #21	F2RL2 (ENSORLG00000022430) #19	iqgap2 (ENSORLG00000009749) ##20	sv2ca (ENSORLG00000009453) #18	ENSORLG00000028194	ENSORLG00000009402	ANKDD1B (ENSORLG00000009384) #15	POLK (ENSORLG00000009364) #14	ENSORLG00000009331 ##13	pip5k1bb (ENSORLG00000009286)	unc45b (ENSORLG00000009250)	kif2a (ENSORLG00000009180)	dimt1l (ENSORLG00000009118)	ENSORLG00000025771	JMY (ENSORLG00000009070)	homer1b (ENSORLG00000009039)	tent2 (ENSORLG00000008989)
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b	ENSGT00510000046704.b.a.d
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g	ENSGT00390000003122.b.h	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g	ENSGT00390000003122.b.h	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Amphiprion	ANCESTRAL SPECIES	10	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.e	ENSGT00940000164012.C.i.b.f	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a ##13	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g	ENSGT00390000003122.b.h	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Orange clownfish	MODERN SPECIES	19	hapln1a (ENSAPEG00000018597)	ENSAPEG00000018625	ENSAPEG00000018692	tmem167a (ENSAPEG00000018721)	ENSAPEG00000018730	ENSAPEG00000018737	zgc:110353 (ENSAPEG00000018774)	ENSAPEG00000018784	ENSAPEG00000018839	ENSAPEG00000018859	ENSAPEG00000018877	ssbp2a (ENSAPEG00000018983)	ENSAPEG00000019036	ENSAPEG00000019067	iqgap2 (ENSAPEG00000019086) ##20	F2RL2 (ENSAPEG00000019240) #19	sv2ca (ENSAPEG00000019260) #18	ENSAPEG00000019305	ANKDD1B (ENSAPEG00000019318) #15	POLK (ENSAPEG00000019364) #14	cert1a (ENSAPEG00000019380) ##13	pip5k1bb (ENSAPEG00000019447)	unc45b (ENSAPEG00000019457)	kif2a (ENSAPEG00000019529)	dimt1l (ENSAPEG00000019673)	ENSAPEG00000019721	ENSAPEG00000019739	ENSAPEG00000019784	JMY (ENSAPEG00000019822)	homer1b (ENSAPEG00000019847)	tent2 (ENSAPEG00000019886)
Clown anemonefish	MODERN SPECIES	1539	ENSAOCG00000005154	ENSAOCG00000005172	ENSAOCG00000005178	ENSAOCG00000005185	ENSAOCG00000005198	zgc:110353 (ENSAOCG00000005207)	ENSAOCG00000005226	ENSAOCG00000005242	ENSAOCG00000002623	ENSAOCG00000005248	ssbp2a (ENSAOCG00000005260)	ENSAOCG00000005275	ENSAOCG00000005281	ENSAOCG00000005290	f2r (ENSAOCG00000005299) #21	F2RL2 (ENSAOCG00000005305) #19	iqgap2 (ENSAOCG00000005344) ##20	sv2ca (ENSAOCG00000000244) #18	ENSAOCG00000005381	ANKDD1B (ENSAOCG00000002068) #15	POLK (ENSAOCG00000005411) #14	cert1a (ENSAOCG00000005494) ##13	pip5k1bb (ENSAOCG00000005569)	unc45b (ENSAOCG00000005639)	kif2a (ENSAOCG00000005742)	ENSAOCG00000005768
Spiny chromis	MODERN SPECIES	8	hapln1a (ENSAPOG00000001887)	ENSAPOG00000001864	ENSAPOG00000001838	tmem167a (ENSAPOG00000001827)	ENSAPOG00000001813	ENSAPOG00000001805	ENSAPOG00000001777	ENSAPOG00000001766	ENSAPOG00000001750	ENSAPOG00000001735	ENSAPOG00000001726	ssbp2a (ENSAPOG00000000027)	ENSAPOG00000024371	f2r (ENSAPOG00000024353) #21	iqgap2 (ENSAPOG00000024338) ##20	F2RL2 (ENSAPOG00000024246) #19	sv2ca (ENSAPOG00000024233) #18	ENSAPOG00000024207	ANKDD1B (ENSAPOG00000024183) #15	POLK (ENSAPOG00000024146) #14	cert1a (ENSAPOG00000024122) ##13	pip5k1bb (ENSAPOG00000024040)
Bicolor damselfish	MODERN SPECIES	470										ENSSPAG00000021034	ssbp2a (ENSSPAG00000021047)	ENSSPAG00000021067	ENSSPAG00000021081	f2r (ENSSPAG00000021094) #21	iqgap2 (ENSSPAG00000021112) ##20	F2RL2 (ENSSPAG00000021188) #19	sv2ca (ENSSPAG00000021204) #18	ENSSPAG00000021228	ANKDD1B (ENSSPAG00000021243) #15	POLK (ENSSPAG00000021274) #14	cert1a (ENSSPAG00000021295) ##13	pip5k1bb (ENSSPAG00000021338)	unc45b (ENSSPAG00000021369)	kif2a (ENSSPAG00000021416)	dimt1l (ENSSPAG00000021538)	ENSSPAG00000021568	ENSSPAG00000021584	ENSSPAG00000021636	JMY (ENSSPAG00000021666)	homer1b (ENSSPAG00000021698)	tent2 (ENSSPAG00000021728)
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000155123.a.h ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.j	ENSGT00940000165930.B.i	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000155123.a.h ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.j	ENSGT00940000165930.B.i	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00970000197576	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000155123.a.h ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.j	ENSGT00940000165930.B.i	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000155123.a.h ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640
Burton s mouthbrooder	MODERN SPECIES	321	ENSHBUG00000009620	ENSHBUG00000009595	ENSHBUG00000009573	tmem167a (ENSHBUG00000009520)	ENSHBUG00000009499	ENSHBUG00000009491	zgc:110353 (ENSHBUG00000009481)	ENSHBUG00000009460	ENSHBUG00000009436	ssbp2a (ENSHBUG00000009411)	ENSHBUG00000009343	ENSHBUG00000009322	ENSHBUG00000009306	f2r (ENSHBUG00000009285) #21	iqgap2 (ENSHBUG00000009270) ##20	F2RL2 (ENSHBUG00000009178) #19	sv2ca (ENSHBUG00000009169) #18	ENSHBUG00000009126	ANKDD1B (ENSHBUG00000009119) #15	POLK (ENSHBUG00000009069) #14	cert1a (ENSHBUG00000009042) ##13	pip5k1bb (ENSHBUG00000008909)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000156102.q.a.a	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.j	ENSGT00940000165930.B.i	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000183076.a.b.a ##20	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000155123.a.h ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000166544.b	ENSGT00940000155186	ENSGT00940000166014	ENSGT00940000165930.A	ENSGT00940000165930.B.j	ENSGT00940000165930.B.i	ENSGT00940000164012.C.i.a	ENSGT00940000164012.C.i.b.d	ENSGT00940000164012.B	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e #21	ENSGT00950000183076.a.b.a ##20	ENSGT01050000244840.A.b.b.a #19	ENSGT00950000182940.b.b.e #18	ENSGT00940000164571	ENSGT00940000154170.A #15	ENSGT00940000156667 #14	ENSGT00940000155123.a.g ##13	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00510000046704.b.a.d	ENSGT00940000156354.o	ENSGT00940000156640	ENSGT00940000159696
Zebra mbuna	MODERN SPECIES	1094	ENSMZEG00005014624	tmem167a (ENSMZEG00005014638)	ENSMZEG00005014667	ENSMZEG00005014670	ENSMZEG00005014675	ENSMZEG00005014699	zgc:110626 (ENSMZEG00005014751)	ENSMZEG00005014783	ENSMZEG00005014856	ssbp2a (ENSMZEG00005014904)	ENSMZEG00005014936	ENSMZEG00005014951	ENSMZEG00005014958	f2r (ENSMZEG00005014966) #21	iqgap2 (ENSMZEG00005014993) ##20	F2RL2 (ENSMZEG00005015046) #19	sv2ca (ENSMZEG00005015055) #18	ENSMZEG00005015071	ANKDD1B (ENSMZEG00005015079) #15	POLK (ENSMZEG00005015104) #14	cert1a (ENSMZEG00005015151) ##13	pip5k1bb (ENSMZEG00005015224)	ficd (ENSMZEG00005015239)	sart3 (ENSMZEG00005015248)	si:ch211-191d15.2 (ENSMZEG00005015269)	ENSMZEG00005015281	ENSMZEG00005015285	coro1ca (ENSMZEG00005015296)	SSH1 (ENSMZEG00005015320)	dao.2 (ENSMZEG00005015350)	SVOP (ENSMZEG00005015390)
Eastern happy	MODERN SPECIES	3	ENSACLG00000004904	ENSACLG00000004901	tmem167a (ENSACLG00000004895)	ENSACLG00000004888	ENSACLG00000004880	zgc:110353 (ENSACLG00000004869)	ENSACLG00000004856	ENSACLG00000004809	ENSACLG00000004784	ENSACLG00000004738	ssbp2a (ENSACLG00000004665)	ENSACLG00000004622	ENSACLG00000004606	f2r (ENSACLG00000004577) #21	ENSACLG00000004586	F2RL2 (ENSACLG00000004572) #19	iqgap2 (ENSACLG00000004469) ##20	ENSACLG00000004421	ANKDD1B (ENSACLG00000004393) #15	POLK (ENSACLG00000004371) #14	cert1a (ENSACLG00000004115) ##13	pip5k1bb (ENSACLG00000004076)	ENSACLG00000004060	unc45b (ENSACLG00000004010)	kif2a (ENSACLG00000003960)	dimt1l (ENSACLG00000003923)	ENSACLG00000003880	JMY (ENSACLG00000003841)	ENSACLG00000003838	homer1b (ENSACLG00000003797)	tent2 (ENSACLG00000003760)
P. nyererei	MODERN SPECIES	301	EDIL3 (ENSPNYG00000020312)	hapln1a (ENSPNYG00000020301)	ENSPNYG00000020287	ENSPNYG00000020261	ENSPNYG00000020225	tmem167a (ENSPNYG00000020201)	ENSPNYG00000020193	ENSPNYG00000020182	zgc:110353 (ENSPNYG00000020171)	zgc:110626 (ENSPNYG00000020139)	ENSPNYG00000020101	ssbp2a (ENSPNYG00000020062)	ENSPNYG00000020035	ENSPNYG00000020027	f2r (ENSPNYG00000020014) #21	F2RL2 (ENSPNYG00000020000) #19	iqgap2 (ENSPNYG00000019924) ##20	sv2ca (ENSPNYG00000019844) #18	ENSPNYG00000019658	ANKDD1B (ENSPNYG00000019592) #15	POLK (ENSPNYG00000019513) #14	ENSPNYG00000019479 ##13	cert1a (ENSPNYG00000019470) ##13	pip5k1bb (ENSPNYG00000019445)	ENSPNYG00000019427	ENSPNYG00000019422	kif2a (ENSPNYG00000019342)	dimt1l (ENSPNYG00000019293)	ENSPNYG00000019261	JMY (ENSPNYG00000019231)	homer1b (ENSPNYG00000019195)
Lyretail cichlid	MODERN SPECIES	296	ENSNBRG00000002393	ENSNBRG00000002394	zgc:110353 (ENSNBRG00000002407)	ENSNBRG00000002430	ENSNBRG00000002459	ENSNBRG00000002487	ENSNBRG00000002520	ENSNBRG00000002562	ENSNBRG00000002575	ENSNBRG00000002601	ENSNBRG00000002660	ENSNBRG00000002695	ENSNBRG00000002715	f2r (ENSNBRG00000002708) #21	iqgap2 (ENSNBRG00000002727) ##20	F2RL2 (ENSNBRG00000002821) #19	sv2ca (ENSNBRG00000002842) #18	ENSNBRG00000002890	ANKDD1B (ENSNBRG00000002921) #15	ENSNBRG00000002971	POLK (ENSNBRG00000003007) #14	cert1a (ENSNBRG00000003067) ##13	cert1a (ENSNBRG00000003125) ##13	pip5k1bb (ENSNBRG00000003162)	ENSNBRG00000003215	ENSNBRG00000003236	unc45b (ENSNBRG00000003255)	ENSNBRG00000003293	kif2a (ENSNBRG00000003314)	dimt1l (ENSNBRG00000003372)	ENSNBRG00000003419
Nile tilapia	MODERN SPECIES	3	tmem167a (ENSONIG00000028217)	ENSONIG00000028822	ENSONIG00000035172	ENSONIG00000015915	ENSONIG00000041466	ENSONIG00000028275	ENSONIG00000031589	ENSONIG00000034532	ssbp2a (ENSONIG00000035570)	ENSONIG00000032779	ENSONIG00000027834	ENSONIG00000035839	ENSONIG00000006898	f2r (ENSONIG00000042468) #21	iqgap2 (ENSONIG00000016113) ##20	F2RL2 (ENSONIG00000016120) #19	sv2ca (ENSONIG00000016121) #18	ENSONIG00000016123	ANKDD1B (ENSONIG00000016127) #15	POLK (ENSONIG00000016130) #14	cert1a (ENSONIG00000016132) ##13	ENSONIG00000031232 ##13	pip5k1bb (ENSONIG00000016138)	kif2a (ENSONIG00000039186)	kif2a (ENSONIG00000033105)	ENSONIG00000040694	unc45b (ENSONIG00000013759)	ENSONIG00000043220	kif2a (ENSONIG00000013754)	dimt1l (ENSONIG00000013752)	ENSONIG00000013750
Midas cichlid	MODERN SPECIES	744				ENSACIG00000022194	ENSACIG00000022187	tmem167a (ENSACIG00000022156)	ENSACIG00000022152	ENSACIG00000022137	ENSACIG00000022122	ENSACIG00000022109	ENSACIG00000022088	ENSACIG00000022073	ENSACIG00000022065	ENSACIG00000022059	f2r (ENSACIG00000022053) #21	F2RL2 (ENSACIG00000022045) #19	iqgap2 (ENSACIG00000021736) ##20	sv2ca (ENSACIG00000021677) #18	ENSACIG00000021589	ANKDD1B (ENSACIG00000021551) #15	POLK (ENSACIG00000021501) #14	cert1a (ENSACIG00000021453) ##13	ENSACIG00000021424 ##13	ENSACIG00000021401	ENSACIG00000021392	unc45b (ENSACIG00000021351)	kif2a (ENSACIG00000021319)	dimt1l (ENSACIG00000021290)	ENSACIG00000021273	JMY (ENSACIG00000021243)	homer1b (ENSACIG00000021225)
Tiger tail seahorse	MODERN SPECIES	134	ENSHCOG00000014520	pcsk5b (ENSHCOG00000014530)	rfk (ENSHCOG00000014538)	ENSHCOG00000014544	ENSHCOG00000014554	ENSHCOG00000014599	ENSHCOG00000014619	ENSHCOG00000014626	ENSHCOG00000014638	ENSHCOG00000014655	ENSHCOG00000014672	ssbp2a (ENSHCOG00000014699)	ENSHCOG00000014708	ENSHCOG00000014714	f2r (ENSHCOG00000014720) #21	F2RL2 (ENSHCOG00000014726) #19	iqgap2 (ENSHCOG00000014783) ##20	sv2ca (ENSHCOG00000014857) #18	ENSHCOG00000014871	ANKDD1B (ENSHCOG00000014915) #15	POLK (ENSHCOG00000014968) #14	cert1a (ENSHCOG00000015043) ##13	pip5k1bb (ENSHCOG00000015080)	ENSHCOG00000015088	unc45b (ENSHCOG00000015121)	kif2a (ENSHCOG00000015198)	dimt1l (ENSHCOG00000015252)	ENSHCOG00000015263	JMY (ENSHCOG00000015287)	homer1b (ENSHCOG00000015306)	tent2 (ENSHCOG00000015320)
Pinecone sodierfish	MODERN SPECIES	23	ccnh (ENSMMDG00005014495)	RASA1 (ENSMMDG00005014548)	cox7c (ENSMMDG00005017412)	EDIL3 (ENSMMDG00005017415)	hapln1a (ENSMMDG00005017418)	ENSMMDG00005017437	ENSMMDG00005017438	tmem167a (ENSMMDG00005017440)	ENSMMDG00005017441	ENSMMDG00005017442	ENSMMDG00005017444	zgc:110626 (ENSMMDG00005017445)	ENSMMDG00005017447	f2r (ENSMMDG00005017448) #21	iqgap2 (ENSMMDG00005017661) ##20	F2RL2 (ENSMMDG00005023840) #19	sv2ca (ENSMMDG00005023842) #18	ENSMMDG00005023845	ANKDD1B (ENSMMDG00005023846) #15	POLK (ENSMMDG00005023849) #14	cert1a (ENSMMDG00005023857) ##13	pip5k1bb (ENSMMDG00005004289)	unc45b (ENSMMDG00005006070)	ENSMMDG00005006078	kif2a (ENSMMDG00005006130)	ENSMMDG00005008429	dimt1l (ENSMMDG00005008433)	ENSMMDG00005008436	ENSMMDG00005008444	ENSMMDG00005008455	homer1b (ENSMMDG00005008474)
Cod	MODERN SPECIES	19	COX7C (ENSGMOG00000000506)	ENSGMOG00000031424	ENSGMOG00000022366	EDIL3 (ENSGMOG00000018919)	ENSGMOG00000011145	ENSGMOG00000028069	ENSGMOG00000016422	ENSGMOG00000027751	TMEM167A (ENSGMOG00000033366)	ENSGMOG00000011069	ENSGMOG00000011055	ENSGMOG00000026305	ENSGMOG00000036026	ssbp2a (ENSGMOG00000011029)	f2r (ENSGMOG00000011006) #21	F2RL2 (ENSGMOG00000032744) #19	iqgap2 (ENSGMOG00000010974) ##20	sv2ca (ENSGMOG00000010961) #18	ENSGMOG00000010940	ANKDD1B (ENSGMOG00000010928) #15	POLK (ENSGMOG00000010897) #14	ENSGMOG00000010878 ##13	ENSGMOG00000010866	ENSGMOG00000010844	ENSGMOG00000010819	ENSGMOG00000010801	ENSGMOG00000010781	ENSGMOG00000010765	JMY (ENSGMOG00000010750)	HOMER1 (ENSGMOG00000029081)	tent2 (ENSGMOG00000010732)
Clupeocephala	ANCESTRAL SPECIES	160	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00510000048902.a.f #9	ENSGT00940000166328	ENSGT00390000014845	ENSGT00670000099470	ENSGT00950000183197.b.a.b	ENSGT00940000165531.b.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000157242.a.b	ENSGT00940000163584.a	ENSGT00940000158491.b	ENSGT00940000171993
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310 #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00510000048902.a.f #9	ENSGT00940000166328	ENSGT00390000014845	ENSGT00670000099470	ENSGT00950000183197.b.a.b	ENSGT00940000165531.b.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000157242.a.b	ENSGT00940000163584.a	ENSGT00940000158491.b	ENSGT00390000012762.u
Otophysi	ANCESTRAL SPECIES	124							ENSGT00940000156290.b	ENSGT00940000157321	ENSGT01050000244898.b.b.e.b	ENSGT00390000000529	ENSGT00940000159607	ENSGT00390000006265.b.c	ENSGT00390000014052	ENSGT00390000016384.l.a	ENSGT00940000166116	ENSGT01050000244840.A.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731	ENSGT00940000159569	ENSGT00940000159324	ENSGT00980000199895	ENSGT00390000008732.b	ENSGT00940000162727.a.b	ENSGT00940000163466	ENSGT00940000167622	ENSGT00390000013040	ENSGT00390000018830.a.b
Characiphysae	ANCESTRAL SPECIES	68	ENSGT00390000014118	ENSGT00940000156959.A.c.a	ENSGT00940000159211.C.jb.b	ENSGT00950000183047.d.e	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000156290.b	ENSGT00940000157321	ENSGT01050000244898.b.b.e.b	ENSGT00390000000529	ENSGT00940000159607	ENSGT00390000006265.b.c	ENSGT00390000014052	ENSGT00390000016384.l.a	ENSGT00940000166116	ENSGT01050000244840.A.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731	ENSGT00940000159569	ENSGT00940000159324.c	ENSGT00980000199895	ENSGT00390000008732.b	ENSGT00940000162727.a.b	ENSGT00390000013040	ENSGT00390000018830.a.b	ENSGT01030000234535.C	ENSGT00390000005254
Characiphysae_b	ANCESTRAL SPECIES	73	ENSGT00390000014118	ENSGT00940000156959.A.c.a	ENSGT00940000159211.C.jb.b	ENSGT00950000183047.d.e	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000156290.b	ENSGT00940000157321	ENSGT01050000244898.b.b.e.b	ENSGT00390000000529	ENSGT00940000159607	ENSGT00390000006265.b.c	ENSGT00390000014052	ENSGT00390000016384.l.a	ENSGT00940000166116	ENSGT01050000244840.A.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731	ENSGT00940000159569	ENSGT00940000159324.c	ENSGT00980000199895	ENSGT00390000008732.b	ENSGT00940000162727.a.b	ENSGT00390000013040	ENSGT00390000018830.a.b	ENSGT01030000234535.C	ENSGT00390000005254
Characoidei	ANCESTRAL SPECIES	67	ENSGT00390000014118	ENSGT00950000183007.b.e.b.a.d	ENSGT00940000156959.A.c.a	ENSGT00940000159211.C.jb.b	ENSGT00950000183047.d.e	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000156290.b	ENSGT00940000157321	ENSGT01050000244898.b.b.e.b	ENSGT00390000000529	ENSGT00940000159607	ENSGT00390000006265.b.c	ENSGT00390000014052	ENSGT00390000016384.l.a	ENSGT01050000244840.A.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731	ENSGT00940000159569	ENSGT00940000159324.c	ENSGT00980000199895	ENSGT00390000008732.b	ENSGT00940000162727.a.b	ENSGT00390000013040	ENSGT00390000018830.a.b	ENSGT01030000234535.C	ENSGT00390000005254
Red-bellied piranha	MODERN SPECIES	315							dck (ENSPNAG00000019289)	mob1bb (ENSPNAG00000019274)	CACFD1 (ENSPNAG00000019257)	ENSPNAG00000019227	ENSPNAG00000019216	ENSPNAG00000019176	uqcr10 (ENSPNAG00000019168)	rpl35 (ENSPNAG00000019152)	ENSPNAG00000003560	F2RL2 (ENSPNAG00000018937) #19	ENSPNAG00000018927	ccng2 (ENSPNAG00000003557)	ccni (ENSPNAG00000006596)	ENSPNAG00000018843	SHROOM3 (ENSPNAG00000018824)	ENSPNAG00000018770	pdcl (ENSPNAG00000018760)	ENSPNAG00000003550	ENSPNAG00000018692	rpl28 (ENSPNAG00000003547)	ENSPNAG00000003545	psmd5 (ENSPNAG00000018581)	LOXHD1 (ENSPNAG00000018553)	st8sia5 (ENSPNAG00000018393)	rpl37 (ENSPNAG00000018334)
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000030406	taf10 (ENSAMXG00000000178)	ENSAMXG00000024835	FNBP1 (ENSAMXG00000013371)	cdk9 (ENSAMXG00000013366)	fpgs (ENSAMXG00000043064)	SLC4A4 (ENSAMXG00000013324)	dck (ENSAMXG00000013318)	mob1bb (ENSAMXG00000042689)	ENSAMXG00000043815	REXO4 (ENSAMXG00000013291)	ENSAMXG00000036729	uqcr10 (ENSAMXG00000013273)	rpl35 (ENSAMXG00000029232)	ENSAMXG00000013252	F2RL2 (ENSAMXG00000038635) #19	ENSAMXG00000013241	ccng2 (ENSAMXG00000013239)	ccni (ENSAMXG00000029270)	ENSAMXG00000031420	ENSAMXG00000033901	SHROOM3 (ENSAMXG00000013226)	ENSAMXG00000034570	pdcl (ENSAMXG00000035184)	ENSAMXG00000042374	ENSAMXG00000041650	SEC16A (ENSAMXG00000014823)	ENSAMXG00000041484	rpl28 (ENSAMXG00000042541)	ENSAMXG00000014809	ENSAMXG00000043097
Electric eel	MODERN SPECIES	1079							ENSEEEG00000020241	dck (ENSEEEG00000020242)	mob1bb (ENSEEEG00000020244)	ENSEEEG00000020246	ENSEEEG00000020249	ENSEEEG00000020256	uqcr10 (ENSEEEG00000020283)	rpl35 (ENSEEEG00000020284)	wdr38 (ENSEEEG00000020286)	F2RL2 (ENSEEEG00000020287) #19
Channel catfish	MODERN SPECIES	9	EGFL7 (ENSIPUG00000021382)	ap3b1 (ENSIPUG00000021394) #31	tbca (ENSIPUG00000021474) #30	otpa (ENSIPUG00000021492) #29	s100z (ENSIPUG00000021500) #23	ch25hl2 (ENSIPUG00000021505)	ENSIPUG00000021507	f2rl1 (ENSIPUG00000021530) #22	psmb7 (ENSIPUG00000021532)	aggf1 (ENSIPUG00000021569) #25	wdr41 (ENSIPUG00000021613) #28	nr5a1b (ENSIPUG00000021672)	uqcr10 (ENSIPUG00000022177)	rpl35 (ENSIPUG00000022186)	wdr38 (ENSIPUG00000022200)	F2RL2 (ENSIPUG00000022237) #19	ENSIPUG00000022239	CCNG2 (ENSIPUG00000022244)	ccni (ENSIPUG00000022251)	ENSIPUG00000022269	ENSIPUG00000022274	ENSIPUG00000022286	ENSIPUG00000022292	PDCL (ENSIPUG00000004638)	ENSIPUG00000004683	rpl28 (ENSIPUG00000004935)	psmd5 (ENSIPUG00000004988)	ENSIPUG00000005079	ENSIPUG00000005098	LOXHD1 (ENSIPUG00000005125)	st8sia5 (ENSIPUG00000005289)
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00390000006452.b.a	ENSGT00390000017382	ENSGT00390000014118	ENSGT00940000156959.A.c.a	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000156290.b	ENSGT00940000157321	ENSGT01050000244898.b.b.e.b	ENSGT00390000000529	ENSGT00940000159607	ENSGT00390000006265.b.c	ENSGT00390000014052	ENSGT00390000016384.l.a	ENSGT00940000166116	ENSGT01050000244840.A.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731.d	ENSGT00940000163304.j.a.a.g.a.a.a.a.a	ENSGT00940000163304.j.a.a.g.a.a.a.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	745						ENSGT00940000155373.p	ENSGT00390000016526.j	ENSGT00940000156290.b.e	ENSGT00940000157321.a.b	ENSGT01050000244898.b.b.e.b.a	ENSGT00390000000529.c	ENSGT00940000159607.i	ENSGT00390000014052.d	ENSGT00390000016384.l.a.b	ENSGT00940000166116	ENSGT01050000244840.A.b.b.b.a #19
Cyprininae_a	ANCESTRAL SPECIES	1254															ENSGT00940000166116	ENSGT01050000244840.A.b.b.b.a #19
Common carp reference	MODERN SPECIES	38	ppp1r26 (ENSCCRG00000077967)	olfm1b (ENSCCRG00000027210)	ENSCCRG00000080133	ENSCCRG00000008076	ENSCCRG00000045641	cdk9 (ENSCCRG00000076439)	fpgs (ENSCCRG00000039826)	ENSCCRG00000074815	dck (ENSCCRG00000010449)	mob1bb (ENSCCRG00000070102)	ENSCCRG00000010518	ENSCCRG00000010519	rpl35 (ENSCCRG00000010523)	uqcr10 (ENSCCRG00000010521)	wdr38 (ENSCCRG00000067537)	ENSCCRG00000039697 #19	ccng2 (ENSCCRG00000072523)	ccni (ENSCCRG00000068947)	ENSCCRG00000016536	SHROOM3 (ENSCCRG00000038985)	ENSCCRG00000078306	ENSCCRG00000033590	ly6m6 (ENSCCRG00000041035)	ENSCCRG00000041030	ENSCCRG00000064145	ENSCCRG00000058970	ENSCCRG00000063708	ENSCCRG00000059138	ENSCCRG00000067764	ENSCCRG00000042425	ENSCCRG00000013856
Goldfish	MODERN SPECIES	40	fpgs (ENSCARG00000031216)	cdk9 (ENSCARG00000031151)	ENSCARG00000031129	FNBP1 (ENSCARG00000030924)	ENSCARG00000030871	cdk9 (ENSCARG00000030843)	fpgs (ENSCARG00000028768)	SLC4A4 (ENSCARG00000021058)	dck (ENSCARG00000020863)	mob1bb (ENSCARG00000020849)	CACFD1 (ENSCARG00000020842)	ENSCARG00000020838	uqcr10 (ENSCARG00000020832)	rpl35 (ENSCARG00000020825)	ENSCARG00000020820	ENSCARG00000020817 #19	ENSCARG00000020811	ENSCARG00000020737	esm1 (ENSCARG00000020422)	ARHGAP24 (ENSCARG00000020380)	mapk10 (ENSCARG00000017060)	ptpn13 (ENSCARG00000016696)	sdad1 (ENSCARG00000016405)	ENSCARG00000016395	ENSCARG00000016392	ENSCARG00000016386	CRB2 (ENSCARG00000016368)	DENND1A (ENSCARG00000015942)	NEK6 (ENSCARG00000015728)	psmb7 (ENSCARG00000015702)	nr5a1b (ENSCARG00000015694)
Cyprininae	ANCESTRAL SPECIES	344	ENSGT00390000014118.i	ENSGT00940000156959.A.c.a.b	ENSGT00940000159211.C.jb.b.e	ENSGT00390000003044	ENSGT00950000183047.d.e.d	ENSGT00940000163304.j.a.a.g.a.b.a.b.b.b.a.a	ENSGT00940000155373.o	ENSGT00390000016526.i	ENSGT00940000156290.b.f	ENSGT00940000157321.a.a	ENSGT00390000000529.d	ENSGT00940000159607.j	ENSGT00390000006265.b.c	ENSGT00390000014052.c	ENSGT00390000016384.l.a.a	ENSGT01050000244840.A.b.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j.b	ENSGT00940000154827.hb	ENSGT00950000183003.a.a.a.a.a.g	ENSGT00940000157778.s.a	ENSGT00390000007731.c
Cyprininae_a	ANCESTRAL SPECIES	201	ENSGT00940000159211.C.jb.b.e	ENSGT00390000003044	ENSGT00950000183047.d.e.d	ENSGT00940000163304.j.a.a.g.a.b.a.b.b.b.a.a	ENSGT00940000155373.o	ENSGT00390000016526.i	ENSGT00940000156290.b.f	ENSGT00940000157321.a.a	ENSGT01050000244898.b.b.e.b.b	ENSGT00390000000529.d	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.b.a	ENSGT00390000006265.b.c	ENSGT00390000014052.c	ENSGT00390000016384.l.a.a	ENSGT01060000253594	ENSGT01050000244840.A.b.b.b.b #19	ENSGT00390000010767	ENSGT00940000156423.j.b	ENSGT00940000154827.hb	ENSGT00950000183003.a.a.a.a.a.g	ENSGT00940000157778.s.a	ENSGT00390000007731.d	ENSGT00940000163304.j.a.a.g.a.b.a.a.a.a.b	ENSGT00940000159569.l	ENSGT00940000159324.a	ENSGT00980000199895.b	ENSGT00390000008732.b.h	ENSGT00940000162727.a.b.c	ENSGT00390000013040.o	ENSGT00390000018830.a.b.g	ENSGT01030000234535.C.c.b
Common carp reference	MODERN SPECIES	45	ENSCCRG00000046852	ENSCCRG00000073805	ENSCCRG00000076877	ENSCCRG00000022824	cdk9 (ENSCCRG00000068084)	fpgs (ENSCCRG00000047897)	ENSCCRG00000048099	dck (ENSCCRG00000079507)	ENSCCRG00000079057	mob1bb (ENSCCRG00000045326)	ENSCCRG00000066812	ENSCCRG00000058963	uqcr10 (ENSCCRG00000032043)	rpl35 (ENSCCRG00000032051)	ENSCCRG00000068270	ENSCCRG00000029964 #19	ENSCCRG00000039640	ccng2 (ENSCCRG00000039649)	ccni (ENSCCRG00000039659)	ENSCCRG00000072168	SHROOM3 (ENSCCRG00000039684)	ENSCCRG00000046640	ENSCCRG00000063249	ENSCCRG00000060320	ENSCCRG00000033526	ENSCCRG00000081971	ENSCCRG00000033546	ENSCCRG00000033563	ENSCCRG00000033536	ENSCCRG00000033586	ENSCCRG00000055123
Golden-line barbel	MODERN SPECIES	69	mrps2 (ENSSGRG00000033007)	olfm1b (ENSSGRG00000033010)	ENSSGRG00000033019	FNBP1 (ENSSGRG00000033022)	cdk9 (ENSSGRG00000033028)	fpgs (ENSSGRG00000033055)	SLC4A4 (ENSSGRG00000033085)	mob1bb (ENSSGRG00000033582)	CACFD1 (ENSSGRG00000033606)	REXO4 (ENSSGRG00000033608)	ENSSGRG00000033609	ENSSGRG00000033616	uqcr10 (ENSSGRG00000033696)	rpl35 (ENSSGRG00000033698)	ENSSGRG00000033767	ENSSGRG00000033768 #19	ENSSGRG00000033769	ccng2 (ENSSGRG00000033772)	ccni (ENSSGRG00000033775)	ENSSGRG00000033778	SHROOM3 (ENSSGRG00000033780)	ENSSGRG00000033785	ENSSGRG00000033787	ENSSGRG00000033788	ENSSGRG00000033789	ENSSGRG00000033791	KCNK12 (ENSSGRG00000033792)	GOLGA4 (ENSSGRG00000033794)	ZC3H6 (ENSSGRG00000033853)	zmp:0000001138 (ENSSGRG00000033854)	ENSSGRG00000033855
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	13	ENSCARG00000012879	ENSCARG00000017688	FNBP1 (ENSCARG00000017731)	ENSCARG00000017900	ENSCARG00000017904	cdk9 (ENSCARG00000017914)	fpgs (ENSCARG00000017960)	ENSCARG00000018497	dck (ENSCARG00000020916)	CACFD1 (ENSCARG00000020929)	ENSCARG00000020940	ENSCARG00000020947	ENSCARG00000020973	uqcr10 (ENSCARG00000021358)	rpl35 (ENSCARG00000021361)	F2RL2 (ENSCARG00000021382) #19	ENSCARG00000021387	ccng2 (ENSCARG00000021397)	ccni (ENSCARG00000021404)	ENSCARG00000021412	SHROOM3 (ENSCARG00000021426)	ENSCARG00000021454	ENSCARG00000021458	ENSCARG00000021464	ENSCARG00000021470	ENSCARG00000021475	pdcl (ENSCARG00000021486)	ENSCARG00000021530	ENSCARG00000021674	rpl28 (ENSCARG00000021683)	ch25hl2 (ENSCARG00000021788)
Goldfish	MODERN SPECIES	2403														uqcr10 (ENSCARG00000051051)	rpl35 (ENSCARG00000050998)	F2RL2 (ENSCARG00000050984) #19
Zebrafish	MODERN SPECIES	13	ENSDARG00000096367	ENSDARG00000092967	ENSDARG00000092664	ENSDARG00000093173	cdk9 (ENSDARG00000044811)	fpgs (ENSDARG00000044809)	SLC4A4 (ENSDARG00000044808)	dck (ENSDARG00000044807)	mob1bb (ENSDARG00000012953)	CACFD1 (ENSDARG00000090818)	ENSDARG00000088619	ENSDARG00000086746	uqcr10 (ENSDARG00000104517)	rpl35 (ENSDARG00000018334)	wdr38 (ENSDARG00000044801)	F2RL2 (ENSDARG00000079472) #19	ENSDARG00000096310	ccng2 (ENSDARG00000017602)	ccni (ENSDARG00000068214)	SHROOM3 (ENSDARG00000102180)	ENSDARG00000098408	ENSDARG00000103060	ENSDARG00000101786	ly6m6 (ENSDARG00000102159)	ENSDARG00000099332	ENSDARG00000098616	ENSDARG00000099416	ENSDARG00000104775	psmd5 (ENSDARG00000059046)	LOXHD1 (ENSDARG00000094738)	st8sia5 (ENSDARG00000036584)
Clupeiformes	ANCESTRAL SPECIES	129							ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00510000048902.a.f #9	ENSGT00940000166328	ENSGT00390000014845	ENSGT00670000099470	ENSGT00940000165531.b.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000157242.a.b	ENSGT00940000163584.a	ENSGT00390000012762.u	ENSGT00940000155567	ENSGT00940000159777
Denticle herring	MODERN SPECIES	13	lhfpl2a (ENSDCDG00000020317) #34	scamp1 (ENSDCDG00000020319) #33	AP3B1 (ENSDCDG00000020440) #31	tbca (ENSDCDG00000027202) #30	otpa (ENSDCDG00000027203) #29	wdr41 (ENSDCDG00000027205) #28	PDE8B (ENSDCDG00000027214) #27	ENSDCDG00000027275	aggf1 (ENSDCDG00000027278) #25	crhbp (ENSDCDG00000027281) #24	s100z (ENSDCDG00000027282) #23	ch25hl2 (ENSDCDG00000027283)	f2rl1.2 (ENSDCDG00000027284) #22	f2rl1.2 (ENSDCDG00000027286) #22	f2rl1.1 (ENSDCDG00000027287) #22	F2RL2 (ENSDCDG00000027288) #19	SV2C (ENSDCDG00000027291) #18	CERT1 (ENSDCDG00000027303) #13	hmgcrb (ENSDCDG00000027394) #12	GCNT4 (ENSDCDG00000028927) #10	FAM169A (ENSDCDG00000028929) #9	lhx5 (ENSDCDG00000028930)	mzt2b (ENSDCDG00000028932)	zgc:193801 (ENSDCDG00000028935)	tnfrsfa (ENSDCDG00000028939)	unc5da (ENSDCDG00000028972)	aqp3b (ENSDCDG00000029961)	ENSDCDG00000029964	ENSDCDG00000029969	dab2 (ENSDCDG00000029983)	c9 (ENSDCDG00000029988)
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00510000048902.a.f #9	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00510000047710	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00990000209055	ENSGT00940000153510.b
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00730000111121 #25	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399	ENSGT00940000155147	ENSGT00390000008457	ENSGT00940000156006	ENSGT00510000050587	ENSGT00980000198836	ENSGT00390000013484	ENSGT00520000055626.a	ENSGT00990000205556	ENSGT00940000159243	ENSGT00940000155771.c	ENSGT00730000110989.c.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	573											ENSGT00940000161125.d #23	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.b.b.b.c #19	ENSGT00950000182940.b.b.f.f #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d #13	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d	ENSGT00940000156006.n.a	ENSGT00510000050587.a	ENSGT00390000013484.h	ENSGT00520000055626.a.d
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00940000158270 #36	ENSGT00990000203589.b.b.g #34	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #33	ENSGT00940000157603.fb.b #31	ENSGT00390000009710.a #30	ENSGT00940000159952.a.b.b #29	ENSGT00940000157817.e #27	ENSGT00730000111121.d #25	ENSGT00390000001362.b.g #24	ENSGT00940000161125.d #23	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.b.b.b.c #19	ENSGT00950000182940.b.b.f.f #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d #13	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a	ENSGT00940000156006.n.a	ENSGT00510000050587.a	ENSGT00980000198836.c	ENSGT00390000013484.h	ENSGT00520000055626.a.d	ENSGT00990000205556.b	ENSGT00390000012355.A.a.a.b	ENSGT00940000156621.e.b.b
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00940000158270 #36	ENSGT00990000203589.b.b.g #34	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #33	ENSGT00940000157603.fb.b #31	ENSGT00390000009710.b #30	ENSGT00390000009710.a.a #30	ENSGT00940000159952.a.b.b #29	ENSGT00940000157817.e #27	ENSGT00730000111121.d #25	ENSGT00390000001362.b.g #24	ENSGT00940000161125.d #23	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.b.b.b.c #19	ENSGT00950000182940.b.b.f.f #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d #13	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a	ENSGT00940000156006.n.a	ENSGT00510000050587.a	ENSGT00980000198836.c	ENSGT00390000013484.h	ENSGT00520000055626.a.d	ENSGT00990000205556.b	ENSGT00390000012355.A.a.a.b	ENSGT00940000156621.e.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00390000003122.a.a.a.e	ENSGT00940000158270 #36	ENSGT00990000203589.b.b.g #34	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #33	ENSGT00940000157603.fb.b #31	ENSGT00390000009710.b #30	ENSGT00940000159952.a.b.b #29	ENSGT00940000157817.e #27	ENSGT00730000111121.d #25	ENSGT00390000001362.b.g #24	ENSGT00940000161125.d #23	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.b.b.b.c #19	ENSGT00950000182940.b.b.f.f #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00940000155123.b.b.d #13	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a	ENSGT00940000156006.n.a	ENSGT00510000050587.a	ENSGT00980000198836.c	ENSGT00390000013484.h	ENSGT00520000055626.a.d	ENSGT00990000205556.b	ENSGT00390000012355.A.a.a.b	ENSGT00940000156621.e.b.b	ENSGT00940000155188.B.a.b
Chinook salmon	MODERN SPECIES	26	JMY (ENSOTSG00005012074)	bhmt (ENSOTSG00005011972)	ARSB (ENSOTSG00005011970) #36	lhfpl2a (ENSOTSG00005011968) #34	ENSOTSG00005011967	scamp1 (ENSOTSG00005011965) #33	AP3B1 (ENSOTSG00005011705) #31	tbca (ENSOTSG00005011704) #30	otpa (ENSOTSG00005011703) #29	PDE8B (ENSOTSG00005011643) #27	aggf1 (ENSOTSG00005011635) #25	crhbp (ENSOTSG00005011633) #24	ch25hl2 (ENSOTSG00005011632)	f2rl1.2 (ENSOTSG00005011631) #22	F2R (ENSOTSG00005011630) #21	F2RL2 (ENSOTSG00005011629) #19	SV2C (ENSOTSG00005011627) #18	ENSOTSG00005011626	CERT1 (ENSOTSG00005011406) #13	atp6v1g1 (ENSOTSG00005011405)	slc31a1 (ENSOTSG00005011404)	cdc26 (ENSOTSG00005011403)	prpf4 (ENSOTSG00005011262)	rnf224 (ENSOTSG00005011260)	ENSOTSG00005011259	pisd (ENSOTSG00005011257)	ENSOTSG00005011254	ENSOTSG00005011253	ANKRD34B (ENSOTSG00005011252)	TRAF2 (ENSOTSG00005011246)	ENSOTSG00005010354
Coho salmon	MODERN SPECIES	21	ENSOKIG00005049671	LHFPL2 (ENSOKIG00005049668) #34	ENSOKIG00005049665	scamp1 (ENSOKIG00005049660) #33	AP3B1 (ENSOKIG00005049495) #31	tbca (ENSOKIG00005049413) #30	otpa (ENSOKIG00005049408) #29	ENSOKIG00005049404	PDE8B (ENSOKIG00005049318) #27	aggf1 (ENSOKIG00005049268) #25	crhbp (ENSOKIG00005049260) #24	s100z (ENSOKIG00005049257) #23	ch25hl2 (ENSOKIG00005049253)	f2rl1.2 (ENSOKIG00005049249) #22	F2R (ENSOKIG00005049246) #21	F2RL2 (ENSOKIG00005049244) #19	SV2C (ENSOKIG00005049163) #18	ENSOKIG00005049142	CERT1 (ENSOKIG00005048556) #13	atp6v1g1 (ENSOKIG00005048457)	slc31a1 (ENSOKIG00005048447)	cdc26 (ENSOKIG00005048436)	prpf4 (ENSOKIG00005048306)	rnf224 (ENSOKIG00005048285)	ENSOKIG00005048284	PISD (ENSOKIG00005048274)	ENSOKIG00005048264	ENSOKIG00005048261	ANKRD34B (ENSOKIG00005048256)	TRAF2 (ENSOKIG00005048246)	ENSOKIG00005047789
Rainbow trout	MODERN SPECIES	364	LHFPL2 (ENSOMYG00000030501) #34	ENSOMYG00000030518	SCAMP1 (ENSOMYG00000023337) #33	AP3B1 (ENSOMYG00000030926) #31	ENSOMYG00000060792	tbca (ENSOMYG00000050741) #30	otpa (ENSOMYG00000032321) #29	PDE8B (ENSOMYG00000032379) #27	aggf1 (ENSOMYG00000032485) #25	crf-bp (ENSOMYG00000071371) #24	s100z (ENSOMYG00000032501) #23	ch25hl2 (ENSOMYG00000032508)	f2rl1.2 (ENSOMYG00000032514) #22	F2R (ENSOMYG00000003544) #21	ENSOMYG00000062425	F2RL2 (ENSOMYG00000032523) #19	SV2C (ENSOMYG00000060958) #18	ENSOMYG00000032540	ENSOMYG00000056356	ENSOMYG00000032608 #13	atp6v1g1 (ENSOMYG00000032720)	slc31a1 (ENSOMYG00000032732)	cdc26 (ENSOMYG00000075708)	prpf4 (ENSOMYG00000032829)	rnf224 (ENSOMYG00000032924)	ENSOMYG00000032928	ENSOMYG00000032993	ENSOMYG00000069015	ENSOMYG00000033029	ENSOMYG00000033034	ENSOMYG00000070703
Salmo	ANCESTRAL SPECIES	1	ENSGT00990000203589.b.b.g #34	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #33	ENSGT00940000157603.fb.b #31	ENSGT00390000009710.a #30	ENSGT00390000009710.b #30	ENSGT00940000159952.a.b.b #29	ENSGT00940000157817.e #27	ENSGT00730000111121.d #25	ENSGT00390000001362.b.g #24	ENSGT00940000161125.d #23	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j #22	ENSGT01050000244840.A.a.a.h.a.e #22	ENSGT01050000244840.A.a.b.f.i #21	ENSGT01050000244840.A.b.b.b.c #19	ENSGT00950000182940.b.b.f.f #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d #13	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a	ENSGT00940000156006.n.a	ENSGT00510000050587.a	ENSGT00980000198836.c	ENSGT00390000013484.h	ENSGT00520000055626.a.d	ENSGT00990000205556.b	ENSGT00390000012355.A.a.a.b	ENSGT00940000156621.e.b.b
River trout	MODERN SPECIES	3	lhfpl2a (ENSSTUG00000007040) #34	scamp1 (ENSSTUG00000007065) #33	ENSSTUG00000007106	AP3B1 (ENSSTUG00000007196) #31	tbca (ENSSTUG00000010231) #30	otpa (ENSSTUG00000010242) #29	ENSSTUG00000010259	PDE8B (ENSSTUG00000010269) #27	aggf1 (ENSSTUG00000010412) #25	crhbp (ENSSTUG00000010464) #24	s100z (ENSSTUG00000010478) #23	ch25hl2 (ENSSTUG00000010489)	f2rl1.2 (ENSSTUG00000010495) #22	f2rl1.1 (ENSSTUG00000010502) #22	F2R (ENSSTUG00000010507) #21	F2RL2 (ENSSTUG00000010510) #19	SV2C (ENSSTUG00000010522) #18	ENSSTUG00000010636	ENSSTUG00000010643	CERT1 (ENSSTUG00000010713) #13	atp6v1g1 (ENSSTUG00000012790)	slc31a1 (ENSSTUG00000012802)	cdc26 (ENSSTUG00000012816)	prpf4 (ENSSTUG00000012837)	rnf224 (ENSSTUG00000013121)	ENSSTUG00000013135	pisd (ENSSTUG00000013140)	ENSSTUG00000013159	ENSSTUG00000013179	ANKRD34B (ENSSTUG00000013186)	TRAF2 (ENSSTUG00000013201)
Atlantic salmon	MODERN SPECIES	2	LHFPL2 (ENSSSAG00000076195) #34	SCAMP1 (ENSSSAG00000076200) #33	ENSSSAG00000099787	AP3B1 (ENSSSAG00000076252) #31	ENSSSAG00000091845	tbca (ENSSSAG00000077412) #30	otpa (ENSSSAG00000100514) #29	ENSSSAG00000089049	PDE8B (ENSSSAG00000078477) #27	aggf1 (ENSSSAG00000077434) #25	crhbp (ENSSSAG00000077468) #24	s100z (ENSSSAG00000112998) #23	ch25hl2 (ENSSSAG00000113693)	par2 (ENSSSAG00000077482) #22	F2R (ENSSSAG00000089851) #21	F2RL2 (ENSSSAG00000077494) #19	SV2C (ENSSSAG00000077524) #18	ENSSSAG00000078276	ENSSSAG00000101380	ENSSSAG00000078152 #13	VATG1 (ENSSSAG00000078764)	slc31a1 (ENSSSAG00000097858)	ENSSSAG00000121570	cdc26 (ENSSSAG00000087152)	prpf4 (ENSSSAG00000014066)	rnf224 (ENSSSAG00000089994)	pisd (ENSSSAG00000105002)	ENSSSAG00000084204	ENSSSAG00000096934	ENSSSAG00000094624	ENSSSAG00000015788
Huchen	MODERN SPECIES	1611											s100z (ENSHHUG00000041742) #23	ch25hl2 (ENSHHUG00000041737)	f2rl1.2 (ENSHHUG00000041732) #22	f2rl1.1 (ENSHHUG00000041720) #22	F2R (ENSHHUG00000041713) #21	F2RL2 (ENSHHUG00000041712) #19	SV2C (ENSHHUG00000041673) #18	ENSHHUG00000041670	ENSHHUG00000041664	ENSHHUG00000041658 #13	CERT1 (ENSHHUG00000041649) #13	ENSHHUG00000041646 ##13	atp6v1g1 (ENSHHUG00000041631)	slc31a1 (ENSHHUG00000041620)	cdc26 (ENSHHUG00000041614)	prpf4 (ENSHHUG00000041542)	rnf224 (ENSHHUG00000041534)	pisd (ENSHHUG00000041519)	ENSHHUG00000041509
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00990000203589.b.b.h #34	ENSGT00940000157310.g.a #33	ENSGT00940000157603.fb.a #31	ENSGT00390000009710.a #30	ENSGT00940000159952.a.b.a #29	ENSGT00390000017026 #28	ENSGT00940000157817.f #27	ENSGT00730000111121.c #25	ENSGT00390000001362.b.h #24	ENSGT00940000161125.c #23	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.b.b.b.d #19	ENSGT00950000182940.b.b.f.e #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399.c	ENSGT00940000155147.i	ENSGT00390000008457.c	ENSGT00940000156006.n.b	ENSGT00510000050587.b	ENSGT00980000198836	ENSGT00390000013484.g	ENSGT00520000055626.a.c	ENSGT00990000205556.a	ENSGT00940000159243	ENSGT00940000155771.c
Huchen	MODERN SPECIES	356	lhfpl2a (ENSHHUG00000003940) #34	scamp1 (ENSHHUG00000003948) #33	AP3B1 (ENSHHUG00000003988) #31	tbca (ENSHHUG00000004085) #30	otpa (ENSHHUG00000004114) #29	wdr41 (ENSHHUG00000004143) #28	PDE8B (ENSHHUG00000004183) #27	aggf1 (ENSHHUG00000004753) #25	crhbp (ENSHHUG00000004761) #24	s100z (ENSHHUG00000004773) #23	ch25hl2 (ENSHHUG00000004780)	f2rl1.2 (ENSHHUG00000004795) #22	f2rl1.1 (ENSHHUG00000004873) #22	f2rl1.1 (ENSHHUG00000004874) #22	F2R (ENSHHUG00000004876) #21	F2RL2 (ENSHHUG00000004882) #19	ENSHHUG00000004886
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00990000203589.b.b.h #34	ENSGT00940000157310.g.a #33	ENSGT00940000157603.fb.a #31	ENSGT00390000009710.b #30	ENSGT00940000159952.a.b.a #29	ENSGT00390000017026 #28	ENSGT00940000157817.f #27	ENSGT00730000111121.c #25	ENSGT00390000001362.b.h #24	ENSGT00940000161125.c #23	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.b.b.b.d #19	ENSGT00950000182940.b.b.f.e #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399.c	ENSGT00940000155147.i	ENSGT00390000008457.c	ENSGT00940000156006.n.b	ENSGT00510000050587.b	ENSGT00980000198836.d	ENSGT00390000013484.g	ENSGT00520000055626.a.c	ENSGT00990000205556.a	ENSGT00940000159243	ENSGT00940000155771.c
Salmo	ANCESTRAL SPECIES		ENSGT01100000263538.A.a.a.b.b.m	ENSGT00990000203589.b.b.h #34	ENSGT00940000157310.g.a #33	ENSGT00940000157603.fb.a #31	ENSGT00940000170540	ENSGT00940000159952.a.b.a #29	ENSGT00390000017026 #28	ENSGT00940000157817.f #27	ENSGT00730000111121.c #25	ENSGT00390000001362.b.h #24	ENSGT00940000161125.c #23	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.b.b.b.d #19	ENSGT00950000182940.b.b.f.e #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399.c	ENSGT00940000155147.i	ENSGT00390000008457.c	ENSGT00940000156006.n.b	ENSGT00510000050587.b	ENSGT00980000198836.d	ENSGT00390000013484.g	ENSGT00520000055626.a.c	ENSGT00990000205556.a	ENSGT00940000159243	ENSGT00940000155771.c
River trout	MODERN SPECIES	15	HOMER1 (ENSSTUG00000041264)	JMY (ENSSTUG00000041093)	bhmt (ENSSTUG00000040918)	DMGDH (ENSSTUG00000039448) #37	ENSSTUG00000039420	lhfpl2a (ENSSTUG00000039418) #34	scamp1 (ENSSTUG00000039388) #33	AP3B1 (ENSSTUG00000038574) #31	aggf1 (ENSSTUG00000038521) #25	crhbp (ENSSTUG00000038512) #24	s100z (ENSSTUG00000038505) #23	ch25hl2 (ENSSTUG00000038497)	f2rl1.1 (ENSSTUG00000038485) #22	f2rl1.1 (ENSSTUG00000038471) #22	F2R (ENSSTUG00000038465) #21	F2RL2 (ENSSTUG00000038460) #19	ENSSTUG00000038453	SV2C (ENSSTUG00000038115) #18	ENSSTUG00000038095	CERT1 (ENSSTUG00000036109) #13	hmgcrb (ENSSTUG00000035385) #12	atp6v1g1 (ENSSTUG00000050531)	slc31a1 (ENSSTUG00000050530)	cdc26 (ENSSTUG00000050527)	ENSSTUG00000050526	rnf224 (ENSSTUG00000050523)	ENSSTUG00000050521	ENSSTUG00000050519	pisd (ENSSTUG00000050513)	ENSSTUG00000050508	ENSSTUG00000050504
Atlantic salmon	MODERN SPECIES		LHFPL2 (ENSSSAG00000115220) #34	scamp1 (ENSSSAG00000080106) #33	ap3b1 (ENSSSAG00000078995) #31	tbca (ENSSSAG00000078918)	otp (ENSSSAG00000078916) #29	wdr41 (ENSSSAG00000078906) #28	PDE8B (ENSSSAG00000077426) #27	aggf1 (ENSSSAG00000078440) #25	crhbp (ENSSSAG00000078436) #24	s100z (ENSSSAG00000120666) #23	ch25hl2 (ENSSSAG00000078425)	f2rl1.1 (ENSSSAG00000084722) #22	f2rl1.1 (ENSSSAG00000078417) #22	f2rl1.1 (ENSSSAG00000078421) #22	F2R (ENSSSAG00000077489) #21	F2RL2 (ENSSSAG00000098455) #19	ENSSSAG00000078409	ENSSSAG00000078315 #13	ENSSSAG00000082186	hmdh (ENSSSAG00000077677) #12	slc31a1 (ENSSSAG00000077631)	cdc26 (ENSSSAG00000095124)	prpf4 (ENSSSAG00000104108)	rnf224 (ENSSSAG00000077619)	ENSSSAG00000077616	ENSSSAG00000077607	ENSSSAG00000077599	ENSSSAG00000077592	ENSSSAG00000112208	ENSSSAG00000077582	ENSSSAG00000077565
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00990000203589.b.b.h #34	ENSGT00940000157310.g.a #33	ENSGT00940000157603.fb.a #31	ENSGT00390000009710.a.b #30	ENSGT00940000159952.a.b.a #29	ENSGT00390000017026 #28	ENSGT00940000157817.f #27	ENSGT00730000111121.c #25	ENSGT00390000001362.b.h #24	ENSGT00940000161125.c #23	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.b.b.b.d #19	ENSGT00950000182940.b.b.f.e #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399.c	ENSGT00940000155147.i	ENSGT00390000008457.c	ENSGT00940000156006.n.b	ENSGT01060000253486	ENSGT00510000050587.b	ENSGT00980000198836.d	ENSGT00390000013484.g	ENSGT00520000055626.a.c	ENSGT00990000205556.a	ENSGT00940000159243
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00990000203589.b.b.h #34	ENSGT00940000157310.g.a #33	ENSGT00940000157603.gb #31	ENSGT00390000009710.a.b #30	ENSGT00940000159952.a.b.a #29	ENSGT00390000017026 #28	ENSGT00940000157817.f #27	ENSGT00730000111121.c #25	ENSGT00390000001362.b.h #24	ENSGT00940000161125.c #23	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i #22	ENSGT01050000244840.A.a.a.h.a.f.b #22	ENSGT01050000244840.A.a.a.h.a.f.a #22	ENSGT01050000244840.A.a.b.f.j #21	ENSGT01050000244840.A.b.b.b.d #19	ENSGT00950000182940.b.b.f.e #18	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c #13	ENSGT00940000155305.b.b #12	ENSGT00940000154399.c	ENSGT00940000155147.i	ENSGT00390000008457.c	ENSGT00940000156006.n.b	ENSGT01060000253486	ENSGT00510000050587.b	ENSGT00980000198836.d	ENSGT00390000013484.g	ENSGT00520000055626.a.c	ENSGT00990000205556.a	ENSGT00940000159243
Coho salmon	MODERN SPECIES	15	lhfpl2a (ENSOKIG00005026687) #34	SCAMP1 (ENSOKIG00005026634) #33	AP3B1 (ENSOKIG00005019349) #31	tbca (ENSOKIG00005018976) #30	otpa (ENSOKIG00005018943) #29	wdr41 (ENSOKIG00005018890) #28	PDE8B (ENSOKIG00005018615) #27	aggf1 (ENSOKIG00005018578) #25	crhbp (ENSOKIG00005018561) #24	s100z (ENSOKIG00005018551) #23	ch25hl2 (ENSOKIG00005018528)	f2rl1.2 (ENSOKIG00005018486) #22	f2rl1.1 (ENSOKIG00005018474) #22	f2rl1.1 (ENSOKIG00005018471) #22	F2R (ENSOKIG00005018463) #21	F2RL2 (ENSOKIG00005018438) #19	ENSOKIG00005018429	SV2C (ENSOKIG00005018365) #18	ENSOKIG00005018354	CERT1 (ENSOKIG00005018187) #13	hmgcrb (ENSOKIG00005018005) #12	atp6v1g1 (ENSOKIG00005017977)	cdc26 (ENSOKIG00005017973)	slc31a1 (ENSOKIG00005017953)	ENSOKIG00005017918	rnf224 (ENSOKIG00005017908)	ENSOKIG00005017904	pisd (ENSOKIG00005017869)	ENSOKIG00005017859	stard4 (ENSOKIG00005017832)	MARVELD2 (ENSOKIG00005017821)
Chinook salmon	MODERN SPECIES	12	bhmt (ENSOTSG00005032687)	DMGDH (ENSOTSG00005033116) #37	ENSOTSG00005035353	tbca (ENSOTSG00005035356) #30	otpa (ENSOTSG00005035378) #29	wdr41 (ENSOTSG00005035379) #28	PDE8B (ENSOTSG00005035380) #27	aggf1 (ENSOTSG00005035381) #25	crhbp (ENSOTSG00005035382) #24	s100z (ENSOTSG00005035384) #23	ch25hl2 (ENSOTSG00005035385)	f2rl1.2 (ENSOTSG00005035386) #22	f2rl1.1 (ENSOTSG00005035387) #22	f2rl1.1 (ENSOTSG00005035388) #22	F2R (ENSOTSG00005035389) #21	F2RL2 (ENSOTSG00005035390) #19	SV2C (ENSOTSG00005035394) #18	ENSOTSG00005035858	CERT1 (ENSOTSG00005035862) #13	hmgcrb (ENSOTSG00005036211) #12	atp6v1g1 (ENSOTSG00005001785)	slc31a1 (ENSOTSG00005001964)	cdc26 (ENSOTSG00005001966)	prpf4 (ENSOTSG00005001967)	ENSOTSG00005001969	rnf224 (ENSOTSG00005001971)	ENSOTSG00005001972	pisd (ENSOTSG00005001974)	ENSOTSG00005001978	ENSOTSG00005001980	stard4 (ENSOTSG00005001981)
Northern pike	MODERN SPECIES	13	lhfpl2a (ENSELUG00000006588) #34	scamp1 (ENSELUG00000006644) #33	AP3B1 (ENSELUG00000006692) #31	tbca (ENSELUG00000006728) #30	otpa (ENSELUG00000006749) #29	wdr41 (ENSELUG00000006803) #28	PDE8B (ENSELUG00000006875) #27	aggf1 (ENSELUG00000000226) #25	crhbp (ENSELUG00000006962) #24	s100z (ENSELUG00000006972) #23	ch25hl2 (ENSELUG00000006977)	f2rl1.2 (ENSELUG00000006989) #22	f2rl1.1 (ENSELUG00000006993) #22	f2r2.1 (ENSELUG00000007082) #21	f2rl1.1 (ENSELUG00000007001) #22	F2RL2 (ENSELUG00000007103) #19	SV2C (ENSELUG00000007129) #18	CERT1 (ENSELUG00000007230) #13	hmgcrb (ENSELUG00000007320) #12	atp6v1g1 (ENSELUG00000034652)	prpf4 (ENSELUG00000007510)	cdc26 (ENSELUG00000007352)	rnf224 (ENSELUG00000007522)	ENSELUG00000007530	pisd (ENSELUG00000007552)	ENSELUG00000007569	ENSELUG00000007577	stard4 (ENSELUG00000007604)	MARVELD2 (ENSELUG00000001231)	oclna (ENSELUG00000001157)	ENSELUG00000007696
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.b #29	ENSGT00940000170540	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00990000209055	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00990000209055	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Tiger tail seahorse	MODERN SPECIES	547											crhbp (ENSHCOG00000011105) #24	s100z (ENSHCOG00000011089) #23	ch25hl2 (ENSHCOG00000011084)	f2rl1.2 (ENSHCOG00000011067) #22	f2r2.1 (ENSHCOG00000011058) #21	F2RL2 (ENSHCOG00000011054) #19	SV2C (ENSHCOG00000011047) #18	CERT1 (ENSHCOG00000011013) #13	ENSHCOG00000010964
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Mangrove rivulus	MODERN SPECIES	149										crhbp (ENSKMAG00000012248) #24	s100z (ENSKMAG00000012227) #23	ch25hl2 (ENSKMAG00000012213)	f2rl1.2 (ENSKMAG00000012201) #22	f2rl1.1 (ENSKMAG00000012189) #22	f2r2.1 (ENSKMAG00000012181) #21	F2RL2 (ENSKMAG00000012168) #19	ENSKMAG00000012156	SV2C (ENSKMAG00000012134) #18	CERT1 (ENSKMAG00000012022) #13	hmgcrb (ENSKMAG00000011914) #12	GCNT4 (ENSKMAG00000011886) #10	lhx5 (ENSKMAG00000011869)	ENSKMAG00000011767	mzt2b (ENSKMAG00000011725)	trim23 (ENSKMAG00000011663)	ppwd1 (ENSKMAG00000011602)	cwc27 (ENSKMAG00000011570)	ADAMTS6 (ENSKMAG00000011498)
Turquoise killifish	MODERN SPECIES	1611	DMGDH (ENSNFUG00015004648) #37	ARSB (ENSNFUG00015004599) #36	LHFPL2A (ENSNFUG00015004591) #34	Nfu_g_1_006313 (ENSNFUG00015004582) #33	AP3B1 (ENSNFUG00015004371) #31	tbca (ENSNFUG00015004274) #30	OTPB (ENSNFUG00015004263) #29	WDR41 (ENSNFUG00015004234) #28	PDE8B (ENSNFUG00015003954) #27	CRHBP (ENSNFUG00015003890) #24	S100Z (ENSNFUG00015010858) #23	ch25hl2 (ENSNFUG00015010842)	F2RL1.2 (ENSNFUG00015010834) #22	f2rl1.1 (ENSNFUG00015010828) #22	Nfu_g_1_006533 (ENSNFUG00015010823) #21	F2RL2 (ENSNFUG00015010814) #19	SV2C (ENSNFUG00015010761) #18	COL4A3BP (ENSNFUG00015009754) #13	HMGCRB (ENSNFUG00015009514) #12	GCNT4 (ENSNFUG00015009486) #10	lhx5 (ENSNFUG00015009471)	mzt2b (ENSNFUG00015009462)	trim23 (ENSNFUG00015009218)	ppwd1 (ENSNFUG00015008872)	cwc27 (ENSNFUG00015008838)	ADAMTS6 (ENSNFUG00015008782)	ENSNFUG00015008765	plac8.1 (ENSNFUG00015008759)	cops4 (ENSNFUG00015008730)	LIN54 (ENSNFUG00015008673)	SEC31A (ENSNFUG00015008627)
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
NAME_4	ANCESTRAL SPECIES		ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Mummichog	MODERN SPECIES	2267						tbca (ENSFHEG00000005810) #30	otpa (ENSFHEG00000000677) #29	wdr41 (ENSFHEG00000005844) #28	PDE8B (ENSFHEG00000005895) #27	crhbp (ENSFHEG00000005908) #24	s100z (ENSFHEG00000005920) #23	ch25hl2 (ENSFHEG00000005932)	f2rl1.2 (ENSFHEG00000005941) #22	f2rl1.1 (ENSFHEG00000005947) #22	f2r2.1 (ENSFHEG00000000158) #21	F2RL2 (ENSFHEG00000005955) #19	SV2C (ENSFHEG00000005978) #18	CERT1 (ENSFHEG00000006058) #13	hmgcrb (ENSFHEG00000006120) #12	GCNT4 (ENSFHEG00000006132) #10	ENSFHEG00000006150	lhx5 (ENSFHEG00000006182)	mzt2b (ENSFHEG00000006201)	trim23 (ENSFHEG00000000170)	ppwd1 (ENSFHEG00000006293)	cwc27 (ENSFHEG00000006320)	ADAMTS6 (ENSFHEG00000006381)	plac8.1 (ENSFHEG00000006414)	cops4 (ENSFHEG00000006500)	lin54 (ENSFHEG00000006513)	sec31a (ENSFHEG00000006753)
Sheepshead minnow	MODERN SPECIES	404							NRP1 (ENSCVAG00000013684)	itgb1b (ENSCVAG00000013623)	ENSCVAG00000000344	ENSCVAG00000013475	s100z (ENSCVAG00000013443) #23	ch25hl2 (ENSCVAG00000013436)	f2rl1.2 (ENSCVAG00000013422) #22	f2rl1.1 (ENSCVAG00000013419) #22	f2r2.1 (ENSCVAG00000013411) #21	F2RL2 (ENSCVAG00000013402) #19	SV2C (ENSCVAG00000013393) #18	CERT1 (ENSCVAG00000013343) #13	hmgcrb (ENSCVAG00000013227) #12	GCNT4 (ENSCVAG00000013140) #10	lhx5 (ENSCVAG00000013138)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b.c #12	ENSGT00940000159721.h.a #10	ENSGT00390000015280	ENSGT00940000168653.b	ENSGT00940000165531.b.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000163584.a	ENSGT00940000158491.b	ENSGT00390000012762	ENSGT00940000155567	ENSGT00940000159777	ENSGT00390000001195.a.b	ENSGT00390000015513.a.b.b
Amazon molly	MODERN SPECIES	280	ARSB (ENSPFOG00000007724) #36	lhfpl2a (ENSPFOG00000007888) #34	scamp1 (ENSPFOG00000007907) #33	AP3B1 (ENSPFOG00000008022) #31	tbca (ENSPFOG00000008215) #30	ENSPFOG00000008261	wdr41 (ENSPFOG00000008295) #28	PDE8B (ENSPFOG00000022318) #27	PDE8B (ENSPFOG00000008456) #27	crhbp (ENSPFOG00000008990) #24	s100z (ENSPFOG00000009037) #23	ch25hl2 (ENSPFOG00000020249)	f2rl1.2 (ENSPFOG00000020250) #22	f2rl1.1 (ENSPFOG00000020251) #22	f2r2.1 (ENSPFOG00000009051) #21	F2RL2 (ENSPFOG00000009061) #19	SV2C (ENSPFOG00000009066) #18	CERT1 (ENSPFOG00000009132) #13	hmgcrb (ENSPFOG00000009328) #12	GCNT4 (ENSPFOG00000020252) #10	ENSPFOG00000024112	trappc13 (ENSPFOG00000009469)	ENSPFOG00000022291	tnfrsfa (ENSPFOG00000009564)	unc5da (ENSPFOG00000009678)	ENSPFOG00000023715	arid6 (ENSPFOG00000022560)	ENSPFOG00000010387	ENSPFOG00000023269	zgc:162472 (ENSPFOG00000010452)	dab2 (ENSPFOG00000010523)
Sailfin molly	MODERN SPECIES	502		ARSB (ENSPLAG00000012289) #36	lhfpl2a (ENSPLAG00000012161) #34	scamp1 (ENSPLAG00000012134) #33	AP3B1 (ENSPLAG00000012095) #31	tbca (ENSPLAG00000012073) #30	otpa (ENSPLAG00000012052) #29	wdr41 (ENSPLAG00000012032) #28	PDE8B (ENSPLAG00000012008) #27	crhbp (ENSPLAG00000011943) #24	s100z (ENSPLAG00000011835) #23	ch25hl2 (ENSPLAG00000011801)	f2rl1.2 (ENSPLAG00000011780) #22	f2rl1.1 (ENSPLAG00000011776) #22	f2r2.1 (ENSPLAG00000011774) #21	F2RL2 (ENSPLAG00000011769) #19	SV2C (ENSPLAG00000011754) #18
Guppy	MODERN SPECIES	442	ARSB (ENSPREG00000019046) #36	lhfpl2a (ENSPREG00000019023) #34	scamp1 (ENSPREG00000018981) #33	AP3B1 (ENSPREG00000018892) #31	ENSPREG00000018858	otpa (ENSPREG00000018848) #29	wdr41 (ENSPREG00000018815) #28	PDE8B (ENSPREG00000018782) #27	crhbp (ENSPREG00000018766) #24	s100z (ENSPREG00000018742) #23	ch25hl2 (ENSPREG00000018722)	ENSPREG00000018708	f2rl1.2 (ENSPREG00000018699) #22	f2rl1.1 (ENSPREG00000018692) #22	f2r2.1 (ENSPREG00000018683) #21	F2RL2 (ENSPREG00000018676) #19	SV2C (ENSPREG00000018654) #18	CERT1 (ENSPREG00000018596) #13	hmgcrb (ENSPREG00000018525) #12	GCNT4 (ENSPREG00000018502) #10	lhx5 (ENSPREG00000018491)	mzt2b (ENSPREG00000018479)	trim23 (ENSPREG00000018458)	ppwd1 (ENSPREG00000018430)	cwc27 (ENSPREG00000018364)	ENSPREG00000018347	ADAMTS6 (ENSPREG00000018308)	plac8.1 (ENSPREG00000018260)	cops4 (ENSPREG00000018229)	lin54 (ENSPREG00000018198)	sec31a (ENSPREG00000018133)
Platyfish	MODERN SPECIES	22	DMGDH (ENSXMAG00000018724) #37	ARSB (ENSXMAG00000018745) #36	lhfpl2a (ENSXMAG00000018753) #34	scamp1 (ENSXMAG00000028164) #33	AP3B1 (ENSXMAG00000018805) #31	tbca (ENSXMAG00000024381) #30	otpa (ENSXMAG00000029861) #29	wdr41 (ENSXMAG00000018834) #28	PDE8B (ENSXMAG00000018842) #27	crhbp (ENSXMAG00000018907) #24	s100z (ENSXMAG00000018916) #23	ch25hl2 (ENSXMAG00000019422)	f2rl1.2 (ENSXMAG00000022315) #22	f2rl1.1 (ENSXMAG00000018920) #22	f2r2.1 (ENSXMAG00000018922) #21	F2RL2 (ENSXMAG00000018925) #19	SV2C (ENSXMAG00000018926) #18	CERT1 (ENSXMAG00000018963) #13	hmgcrb (ENSXMAG00000018982) #12	ENSXMAG00000029435	GCNT4 (ENSXMAG00000023542) #10	lhx5 (ENSXMAG00000025364)	mzt2b (ENSXMAG00000019000)	trim23 (ENSXMAG00000019005)	ppwd1 (ENSXMAG00000019013)	cwc27 (ENSXMAG00000019028)	ENSXMAG00000028220	ADAMTS6 (ENSXMAG00000019046)	plac8.1 (ENSXMAG00000021018)	cops4 (ENSXMAG00000019092)	lin54 (ENSXMAG00000019104)
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000180550	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b.e #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Javanese ricefish	MODERN SPECIES	3	ARSB (ENSOJAG00000020969) #36	lhfpl2a (ENSOJAG00000020996) #34	ENSOJAG00000021004	scamp1 (ENSOJAG00000021017) #33	AP3B1 (ENSOJAG00000021042) #31	tbca (ENSOJAG00000021072) #30	otpa (ENSOJAG00000005941) #29	wdr41 (ENSOJAG00000005989) #28	PDE8B (ENSOJAG00000006231) #27	crhbp (ENSOJAG00000006339) #24	s100z (ENSOJAG00000006352) #23	ch25hl2 (ENSOJAG00000006368)	f2rl1.2 (ENSOJAG00000006457) #22	f2rl1.1 (ENSOJAG00000006526) #22	f2r2.1 (ENSOJAG00000006533) #21	F2RL2 (ENSOJAG00000006540) #19	SV2C (ENSOJAG00000006583) #18	CERT1 (ENSOJAG00000007089) #13	hmgcrb (ENSOJAG00000007200) #12	GCNT4 (ENSOJAG00000007303) #10	lhx5 (ENSOJAG00000007311)	mzt2b (ENSOJAG00000007325)	trim23 (ENSOJAG00000007342)	ppwd1 (ENSOJAG00000007397)	cwc27 (ENSOJAG00000007407)	ADAMTS6 (ENSOJAG00000007539)	plac8.1 (ENSOJAG00000008053)	cops4 (ENSOJAG00000008081)	lin54 (ENSOJAG00000008114)	sec31a (ENSOJAG00000008250)	TMEM150C (ENSOJAG00000008930)
Indian medaka	MODERN SPECIES	30	ARSB (ENSOMEG00000016709) #36	bhmt (ENSOMEG00000016763)	lhfpl2a (ENSOMEG00000016802) #34	scamp1 (ENSOMEG00000016923) #33	AP3B1 (ENSOMEG00000017029) #31	ENSOMEG00000017042	otpa (ENSOMEG00000017048) #29	wdr41 (ENSOMEG00000017120) #28	PDE8B (ENSOMEG00000017299) #27	crhbp (ENSOMEG00000017356) #24	s100z (ENSOMEG00000017389) #23	ch25hl2 (ENSOMEG00000017408)	f2rl1.2 (ENSOMEG00000017412) #22	f2rl1.1 (ENSOMEG00000017425) #22	f2r2.1 (ENSOMEG00000017436) #21	F2RL2 (ENSOMEG00000017449) #19	SV2C (ENSOMEG00000000862) #18	CERT1 (ENSOMEG00000017675) #13	GCNT4 (ENSOMEG00000017718) #10	hmgcrb (ENSOMEG00000017841) #12	lhx5 (ENSOMEG00000017880)	mzt2b (ENSOMEG00000017910)	trim23 (ENSOMEG00000017937)	ppwd1 (ENSOMEG00000017997)	ENSOMEG00000018032	cwc27 (ENSOMEG00000018078)	ADAMTS6 (ENSOMEG00000018187)	ENSOMEG00000018208	cops4 (ENSOMEG00000000468)	lin54 (ENSOMEG00000018289)	sec31a (ENSOMEG00000018435)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000181707	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000180550	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Japanese Medaka HdrR	MODERN SPECIES	3	ENSORLG00000025896	ARSB (ENSORLG00000002398) #36	lhfpl2a (ENSORLG00000002386) #34	scamp1 (ENSORLG00000002381) #33	AP3B1 (ENSORLG00000002365) #31	tbca (ENSORLG00000022186) #30	otpa (ENSORLG00000022528) #29	wdr41 (ENSORLG00000002299) #28	PDE8B (ENSORLG00000002273) #27	crhbp (ENSORLG00000002228) #24	s100z (ENSORLG00000030634) #23	ch25hl2 (ENSORLG00000002205)	f2rl1.2 (ENSORLG00000002198) #22	f2rl1.1 (ENSORLG00000022298) #22	f2r2.1 (ENSORLG00000023591) #21	F2RL2 (ENSORLG00000029096) #19	SV2C (ENSORLG00000002175) #18	CERT1 (ENSORLG00000002149) #13	hmgcrb (ENSORLG00000002060) #12	GCNT4 (ENSORLG00000002049) #10	lhx5 (ENSORLG00000002044)	mzt2b (ENSORLG00000002030)	trim23 (ENSORLG00000002016)	ppwd1 (ENSORLG00000002002)	ENSORLG00000030025	cwc27 (ENSORLG00000001991)	ADAMTS6 (ENSORLG00000001971)	ENSORLG00000025212	plac8.1 (ENSORLG00000024268)	cops4 (ENSORLG00000001924)	lin54 (ENSORLG00000001906)
Chinese medaka	MODERN SPECIES	753											s100z (ENSOSIG00000018041) #23	ch25hl2 (ENSOSIG00000018039)	f2rl1.2 (ENSOSIG00000018038) #22	f2rl1.1 (ENSOSIG00000018034) #22	f2r2.1 (ENSOSIG00000018033) #21	F2RL2 (ENSOSIG00000018032) #19	SV2C (ENSOSIG00000017982) #18	crhbp (ENSOSIG00000017963) #24	otpa (ENSOSIG00000017960) #29	tbca (ENSOSIG00000017957) #30	AP3B1 (ENSOSIG00000017913) #31	scamp1 (ENSOSIG00000017901) #33	lhfpl2a (ENSOSIG00000017898) #34	ARSB (ENSOSIG00000017895) #36	DMGDH (ENSOSIG00000017872) #37	bhmt (ENSOSIG00000017866)	JMY (ENSOSIG00000017853)	HOMER1 (ENSOSIG00000017839)	DTWD2 (ENSOSIG00000017832)	tia1 (ENSOSIG00000017744)	C2orf42 (ENSOSIG00000017741)
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Nile tilapia	MODERN SPECIES	19	scamp1 (ENSONIG00000015481) #33	AP3B1 (ENSONIG00000015468) #31	tbca (ENSONIG00000038998) #30	otpa (ENSONIG00000015466) #29	wdr41 (ENSONIG00000015465) #28	PDE8B (ENSONIG00000015454) #27	crhbp (ENSONIG00000015451) #24	s100z (ENSONIG00000035896) #23	ch25hl2 (ENSONIG00000021002)	f2rl1.2 (ENSONIG00000015447) #22	f2rl1.1 (ENSONIG00000015446) #22	F2R (ENSONIG00000015441) #21	F2R (ENSONIG00000015444) #21	F2R (ENSONIG00000015442) #21	F2R (ENSONIG00000042992) #21	F2RL2 (ENSONIG00000028117) #19	cmklr1 (ENSONIG00000042385)	cmklr1 (ENSONIG00000035231)	SV2C (ENSONIG00000015437) #18	CERT1 (ENSONIG00000015433) #13	hmgcrb (ENSONIG00000015431) #12	GCNT4 (ENSONIG00000015429) #10	lhx5 (ENSONIG00000015427)	mzt2b (ENSONIG00000015425)	trim23 (ENSONIG00000015424)	ppwd1 (ENSONIG00000015422)	cwc27 (ENSONIG00000015415)	ADAMTS6 (ENSONIG00000015412)	plac8.1 (ENSONIG00000015410)	cops4 (ENSONIG00000015405)	lin54 (ENSONIG00000015402)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Lyretail cichlid	MODERN SPECIES	419					AP3B1 (ENSNBRG00000000578) #31	tbca (ENSNBRG00000000529) #30	otpa (ENSNBRG00000000509) #29	wdr41 (ENSNBRG00000000420) #28	PDE8B (ENSNBRG00000020198) #27	crhbp (ENSNBRG00000020174) #24	s100z (ENSNBRG00000020136) #23	ch25hl2 (ENSNBRG00000020125)	f2rl1.2 (ENSNBRG00000020123) #22	f2rl1.1 (ENSNBRG00000020117) #22	F2R (ENSNBRG00000020103) #21	F2RL2 (ENSNBRG00000020084) #19	F2R (ENSNBRG00000020074) #21	SV2C (ENSNBRG00000020050) #18	CERT1 (ENSNBRG00000020026) #13	hmgcrb (ENSNBRG00000020016) #12	GCNT4 (ENSNBRG00000020005) #10	lhx5 (ENSNBRG00000019994)	mzt2b (ENSNBRG00000019985)	trim23 (ENSNBRG00000019976)	ppwd1 (ENSNBRG00000019956)	cwc27 (ENSNBRG00000019906)	ADAMTS6 (ENSNBRG00000019825)	plac8.1 (ENSNBRG00000019785)	cops4 (ENSNBRG00000019754)	lin54 (ENSNBRG00000019683)	sec31a (ENSNBRG00000019633)
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Haplochromini_A	DUPLICATION
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.b.b.b.e #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.b.b.b.e #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Eastern happy	MODERN SPECIES	19	tbca (ENSACLG00000026126) #30	otpa (ENSACLG00000026112) #29	wdr41 (ENSACLG00000026095) #28	PDE8B (ENSACLG00000026032) #27	crhbp (ENSACLG00000026018) #24	s100z (ENSACLG00000025995) #23	ch25hl2 (ENSACLG00000025988)	f2rl1.2 (ENSACLG00000025984) #22	f2rl1.1 (ENSACLG00000025981) #22	F2R (ENSACLG00000025972) #21	ENSACLG00000025957	F2R (ENSACLG00000025951) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025911) #21	F2RL2 (ENSACLG00000025905) #19	F2RL2 (ENSACLG00000025896) #19	SV2C (ENSACLG00000025881) #18	CERT1 (ENSACLG00000025839) #13	hmgcrb (ENSACLG00000025791) #12	GCNT4 (ENSACLG00000025787) #10	lhx5 (ENSACLG00000025781)	mzt2b (ENSACLG00000025764)	trim23 (ENSACLG00000025724)	ppwd1 (ENSACLG00000025671)	cwc27 (ENSACLG00000025628)	ENSACLG00000025619	ENSACLG00000025574	ADAMTS6 (ENSACLG00000025480)	plac8.1 (ENSACLG00000025459)	cops4 (ENSACLG00000025422)	lin54 (ENSACLG00000025384)
Zebra mbuna	MODERN SPECIES	1110	AP3B1 (ENSMZEG00005006264) #31	tbca (ENSMZEG00005006300) #30	otpa (ENSMZEG00005006314) #29	wdr41 (ENSMZEG00005006325) #28	PDE8B (ENSMZEG00005006348) #27	crhbp (ENSMZEG00005006393) #24	s100z (ENSMZEG00005006797) #23	ch25hl2 (ENSMZEG00005006834)	f2rl1.2 (ENSMZEG00005006848) #22	f2rl1.1 (ENSMZEG00005006863) #22	F2R (ENSMZEG00005006871) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006911) #21	F2RL2 (ENSMZEG00005006917) #19	F2RL2 (ENSMZEG00005006925) #19	SV2C (ENSMZEG00005006941) #18	CERT1 (ENSMZEG00005007008) #13	hmgcrb (ENSMZEG00005007061) #12	GCNT4 (ENSMZEG00005007116) #10	lhx5 (ENSMZEG00005007128)	mzt2b (ENSMZEG00005007140)	trim23 (ENSMZEG00005007146)	ppwd1 (ENSMZEG00005007195)	cwc27 (ENSMZEG00005007217)	ADAMTS6 (ENSMZEG00005007248)	plac8.1 (ENSMZEG00005007305)	cops4 (ENSMZEG00005007315)	lin54 (ENSMZEG00005007345)	sec31a (ENSMZEG00005007385)	TMEM150C (ENSMZEG00005007525)
P. nyererei	MODERN SPECIES	297	scamp1 (ENSPNYG00000006292) #33	AP3B1 (ENSPNYG00000006176) #31	tbca (ENSPNYG00000006104) #30	otpa (ENSPNYG00000006080) #29	wdr41 (ENSPNYG00000006061) #28	PDE8B (ENSPNYG00000005997) #27	crhbp (ENSPNYG00000005959) #24	s100z (ENSPNYG00000005915) #23	ch25hl2 (ENSPNYG00000005891)	f2rl1.2 (ENSPNYG00000005884) #22	f2rl1.1 (ENSPNYG00000005869) #22	F2R (ENSPNYG00000005859) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005812) #21	F2RL2 (ENSPNYG00000005804) #19	F2RL2 (ENSPNYG00000005774) #19	SV2C (ENSPNYG00000005738) #18	CERT1 (ENSPNYG00000005673) #13	hmgcrb (ENSPNYG00000005594) #12	ENSPNYG00000005572	GCNT4 (ENSPNYG00000005563) #10	lhx5 (ENSPNYG00000005549)	mzt2b (ENSPNYG00000005538)	trim23 (ENSPNYG00000005520)	ppwd1 (ENSPNYG00000005473)	cwc27 (ENSPNYG00000005384)	ADAMTS6 (ENSPNYG00000005317)	cops4 (ENSPNYG00000005262)	lin54 (ENSPNYG00000005193)	sec31a (ENSPNYG00000004982)	TMEM150C (ENSPNYG00000004914)
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.b.b.b.e #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f.c.b #21	ENSGT01050000244840.A.a.b.f.c.a.b #21	ENSGT01050000244840.A.a.b.f.c.a.a #21	ENSGT01050000244840.A.a.b.f.d #21	ENSGT01050000244840.A.b.b.b.f #19	ENSGT01050000244840.A.b.b.b.e #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b
Eastern happy	MODERN SPECIES	19	AP3B1 (ENSACLG00000026156) #31	tbca (ENSACLG00000026126) #30	otpa (ENSACLG00000026112) #29	wdr41 (ENSACLG00000026095) #28	PDE8B (ENSACLG00000026032) #27	crhbp (ENSACLG00000026018) #24	s100z (ENSACLG00000025995) #23	ch25hl2 (ENSACLG00000025988)	f2rl1.2 (ENSACLG00000025984) #22	f2rl1.1 (ENSACLG00000025981) #22	F2R (ENSACLG00000025972) #21	ENSACLG00000025957	F2R (ENSACLG00000025951) #21	F2R (ENSACLG00000025920) #21	F2R (ENSACLG00000025911) #21	F2RL2 (ENSACLG00000025905) #19	F2RL2 (ENSACLG00000025896) #19	SV2C (ENSACLG00000025881) #18	CERT1 (ENSACLG00000025839) #13	hmgcrb (ENSACLG00000025791) #12	GCNT4 (ENSACLG00000025787) #10	lhx5 (ENSACLG00000025781)	mzt2b (ENSACLG00000025764)	trim23 (ENSACLG00000025724)	ppwd1 (ENSACLG00000025671)	cwc27 (ENSACLG00000025628)	ENSACLG00000025619	ENSACLG00000025574	ADAMTS6 (ENSACLG00000025480)	plac8.1 (ENSACLG00000025459)	cops4 (ENSACLG00000025422)
Zebra mbuna	MODERN SPECIES	1110	scamp1 (ENSMZEG00005006251) #33	AP3B1 (ENSMZEG00005006264) #31	tbca (ENSMZEG00005006300) #30	otpa (ENSMZEG00005006314) #29	wdr41 (ENSMZEG00005006325) #28	PDE8B (ENSMZEG00005006348) #27	crhbp (ENSMZEG00005006393) #24	s100z (ENSMZEG00005006797) #23	ch25hl2 (ENSMZEG00005006834)	f2rl1.2 (ENSMZEG00005006848) #22	f2rl1.1 (ENSMZEG00005006863) #22	F2R (ENSMZEG00005006871) #21	F2R (ENSMZEG00005006884) #21	F2R (ENSMZEG00005006898) #21	F2R (ENSMZEG00005006911) #21	F2RL2 (ENSMZEG00005006917) #19	F2RL2 (ENSMZEG00005006925) #19	SV2C (ENSMZEG00005006941) #18	CERT1 (ENSMZEG00005007008) #13	hmgcrb (ENSMZEG00005007061) #12	GCNT4 (ENSMZEG00005007116) #10	lhx5 (ENSMZEG00005007128)	mzt2b (ENSMZEG00005007140)	trim23 (ENSMZEG00005007146)	ppwd1 (ENSMZEG00005007195)	cwc27 (ENSMZEG00005007217)	ADAMTS6 (ENSMZEG00005007248)	plac8.1 (ENSMZEG00005007305)	cops4 (ENSMZEG00005007315)	lin54 (ENSMZEG00005007345)	sec31a (ENSMZEG00005007385)
P. nyererei	MODERN SPECIES	297	lhfpl2a (ENSPNYG00000006322) #34	scamp1 (ENSPNYG00000006292) #33	AP3B1 (ENSPNYG00000006176) #31	tbca (ENSPNYG00000006104) #30	otpa (ENSPNYG00000006080) #29	wdr41 (ENSPNYG00000006061) #28	PDE8B (ENSPNYG00000005997) #27	crhbp (ENSPNYG00000005959) #24	s100z (ENSPNYG00000005915) #23	ch25hl2 (ENSPNYG00000005891)	f2rl1.2 (ENSPNYG00000005884) #22	f2rl1.1 (ENSPNYG00000005869) #22	F2R (ENSPNYG00000005859) #21	F2R (ENSPNYG00000005833) #21	F2R (ENSPNYG00000005812) #21	F2RL2 (ENSPNYG00000005804) #19	F2RL2 (ENSPNYG00000005774) #19	SV2C (ENSPNYG00000005738) #18	CERT1 (ENSPNYG00000005673) #13	hmgcrb (ENSPNYG00000005594) #12	ENSPNYG00000005572	GCNT4 (ENSPNYG00000005563) #10	lhx5 (ENSPNYG00000005549)	mzt2b (ENSPNYG00000005538)	trim23 (ENSPNYG00000005520)	ppwd1 (ENSPNYG00000005473)	cwc27 (ENSPNYG00000005384)	ADAMTS6 (ENSPNYG00000005317)	cops4 (ENSPNYG00000005262)	lin54 (ENSPNYG00000005193)	sec31a (ENSPNYG00000004982)
Burton s mouthbrooder	MODERN SPECIES	732																F2RL2 (ENSHBUG00000008540) #19	SV2C (ENSHBUG00000008522) #18	CERT1 (ENSHBUG00000008495) #13	hmgcrb (ENSHBUG00000008413) #12	GCNT4 (ENSHBUG00000008338) #10	lhx5 (ENSHBUG00000008325)	mzt2b (ENSHBUG00000008299)	trim23 (ENSHBUG00000008286)	ppwd1 (ENSHBUG00000008269)	cwc27 (ENSHBUG00000008176)	ADAMTS6 (ENSHBUG00000008137)
Midas cichlid	MODERN SPECIES	855													F2R (ENSACIG00000006452) #21	F2R (ENSACIG00000006447) #21	F2R (ENSACIG00000006433) #21	F2RL2 (ENSACIG00000006421) #19	SV2C (ENSACIG00000006388) #18	CERT1 (ENSACIG00000006342) #13	hmgcrb (ENSACIG00000006291) #12	GCNT4 (ENSACIG00000006280) #10	lhx5 (ENSACIG00000006268)	mzt2b (ENSACIG00000006234)	trim23 (ENSACIG00000006198)	ppwd1 (ENSACIG00000006162)	cwc27 (ENSACIG00000006121)	ADAMTS6 (ENSACIG00000006065)	plac8.1 (ENSACIG00000006053)	cops4 (ENSACIG00000006031)	lin54 (ENSACIG00000006005)	ENSACIG00000005995
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Clown anemonefish	MODERN SPECIES	1313	cth1 (ENSAOCG00000001644)	taf6l (ENSAOCG00000022645)	ENSAOCG00000022604	scamp1 (ENSAOCG00000022572) #33	AP3B1 (ENSAOCG00000001638) #31	tbca (ENSAOCG00000022489) #30	otpa (ENSAOCG00000001634) #29	wdr41 (ENSAOCG00000022458) #28	PDE8B (ENSAOCG00000022435) #27	crhbp (ENSAOCG00000022382) #24	s100z (ENSAOCG00000022366) #23	ch25hl2 (ENSAOCG00000022312)	f2rl1.2 (ENSAOCG00000022302) #22	f2rl1.1 (ENSAOCG00000022291) #22	f2r2.1 (ENSAOCG00000022288) #21	F2RL2 (ENSAOCG00000001624) #19
Orange clownfish	MODERN SPECIES	7	scamp1 (ENSAPEG00000003704) #33	lhfpl2a (ENSAPEG00000003763) #34	scamp1 (ENSAPEG00000003780) #33	AP3B1 (ENSAPEG00000003852) #31	ENSAPEG00000003873	tbca (ENSAPEG00000003898) #30	otpa (ENSAPEG00000003913) #29	wdr41 (ENSAPEG00000003933) #28	PDE8B (ENSAPEG00000003990) #27	crhbp (ENSAPEG00000004114) #24	s100z (ENSAPEG00000004132) #23	ch25hl2 (ENSAPEG00000004200)	f2rl1.2 (ENSAPEG00000004215) #22	f2rl1.1 (ENSAPEG00000004237) #22	f2r2.1 (ENSAPEG00000004248) #21	F2RL2 (ENSAPEG00000004295) #19	SV2C (ENSAPEG00000004307) #18	ENSAPEG00000004345	ENSAPEG00000004369	ENSAPEG00000004380	ENSAPEG00000004414	ENSAPEG00000004446	SV2C (ENSAPEG00000004477) #18	ENSAPEG00000004515	CERT1 (ENSAPEG00000004574) #13	hmgcrb (ENSAPEG00000004677) #12	GCNT4 (ENSAPEG00000004763) #10	lhx5 (ENSAPEG00000004769)	ENSAPEG00000004780	mzt2b (ENSAPEG00000004797)	trim23 (ENSAPEG00000004822)
Spiny chromis	MODERN SPECIES	830									PDE8B (ENSAPOG00000017665) #27	crhbp (ENSAPOG00000017678) #24	s100z (ENSAPOG00000017741) #23	ch25hl2 (ENSAPOG00000017761)	f2rl1.2 (ENSAPOG00000017767) #22	f2rl1.1 (ENSAPOG00000017781) #22	f2r2.1 (ENSAPOG00000017788) #21	F2RL2 (ENSAPOG00000017795) #19	SV2C (ENSAPOG00000000802) #18	ENSAPOG00000017894	CERT1 (ENSAPOG00000017976) #13
Bicolor damselfish	MODERN SPECIES	1279										crhbp (ENSSPAG00000013933) #24	s100z (ENSSPAG00000013895) #23	ch25hl2 (ENSSPAG00000013882)	f2rl1.2 (ENSSPAG00000013879) #22	f2rl1.1 (ENSSPAG00000013870) #22	f2r2.1 (ENSSPAG00000013860) #21	F2RL2 (ENSSPAG00000013850) #19	SV2C (ENSSPAG00000013822) #18	ENSSPAG00000013781
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Tongue sole	MODERN SPECIES	5	ENSCSEG00000011631	ENSCSEG00000011625	acads (ENSCSEG00000011604)	crybb1 (ENSCSEG00000011597)	cryba4 (ENSCSEG00000011585)	grk3 (ENSCSEG00000011551)	ENSCSEG00000011496	SEZ6L (ENSCSEG00000011474)	ENSCSEG00000011463	slc27a6 (ENSCSEG00000011454)	s100z (ENSCSEG00000011450) #23	ch25hl2 (ENSCSEG00000011443)	f2rl1.2 (ENSCSEG00000011438) #22	f2rl1.1 (ENSCSEG00000011434) #22	f2r2.1 (ENSCSEG00000011427) #21	F2RL2 (ENSCSEG00000011425) #19	SV2C (ENSCSEG00000011413) #18	CERT1 (ENSCSEG00000011385) #13	hmgcrb (ENSCSEG00000011342) #12	GCNT4 (ENSCSEG00000011334) #10	lhx5 (ENSCSEG00000011321)	mzt2b (ENSCSEG00000011312)	trim23 (ENSCSEG00000011286)	ppwd1 (ENSCSEG00000011265)	cwc27 (ENSCSEG00000011251)	ADAMTS6 (ENSCSEG00000011127)	plac8.1 (ENSCSEG00000011107)	cops4 (ENSCSEG00000011083)	lin54 (ENSCSEG00000011040)	sec31a (ENSCSEG00000010931)	enoph1 (ENSCSEG00000010924)
Turbot	MODERN SPECIES	16	ARSB (ENSSMAG00000010569) #36	LHFPL2 (ENSSMAG00000010559) #34	ENSSMAG00000026772	SCAMP1 (ENSSMAG00000010527) #33	AP3B1 (ENSSMAG00000010503) #31	tbca (ENSSMAG00000010486) #30	otpa (ENSSMAG00000026303) #29	wdr41 (ENSSMAG00000010452) #28	PDE8B (ENSSMAG00000010435) #27	crhbp (ENSSMAG00000010424) #24	s100z (ENSSMAG00000024918) #23	ch25hl2 (ENSSMAG00000010398)	f2rl1.2 (ENSSMAG00000027655) #22	f2rl1.1 (ENSSMAG00000010383) #22	f2r2.1 (ENSSMAG00000030722) #21	F2RL2 (ENSSMAG00000024561) #19	SV2C (ENSSMAG00000010339) #18	ENSSMAG00000010255 #13	GCNT4 (ENSSMAG00000010203) #10	hmgcrb (ENSSMAG00000010211) #12	ENSSMAG00000035108	mzt2b (ENSSMAG00000010171)	ENSSMAG00000010139	ENSSMAG00000010108	ENSSMAG00000010093	ENSSMAG00000009966	plac8.1 (ENSSMAG00000028205)	COPS4 (ENSSMAG00000009906)	lin54 (ENSSMAG00000009869)	sec31a (ENSSMAG00000009779)	TMEM150C (ENSSMAG00000028006)
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603.n #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Barramundi perch	MODERN SPECIES	34		ACSS3 (ENSLCAG00010003060)	lin7a (ENSLCAG00010003066)	myf5 (ENSLCAG00010003070)	myf6 (ENSLCAG00010003076)	rps16 (ENSLCAG00010003081)	ppp1r12a (ENSLCAG00010003115)	pawr (ENSLCAG00010003184)	syt1a (ENSLCAG00010003197)	cyb5r3 (ENSLCAG00010003205)	ENSLCAG00010003294	ch25hl2 (ENSLCAG00010003527)	f2rl1.2 (ENSLCAG00010003531) #22	f2rl1.1 (ENSLCAG00010003533) #22	f2r2.1 (ENSLCAG00010003537) #21	F2RL2 (ENSLCAG00010003542) #19	SV2C (ENSLCAG00010003544) #18	CERT1 (ENSLCAG00010003603) #13	hmgcrb (ENSLCAG00010003972) #12	GCNT4 (ENSLCAG00010004017) #10	lhx5 (ENSLCAG00010004021)	mzt2b (ENSLCAG00010004024)	trim23 (ENSLCAG00010004039)	ppwd1 (ENSLCAG00010004059)	cwc27 (ENSLCAG00010004089)	ADAMTS6 (ENSLCAG00010004119)	PLAC8 (ENSLCAG00010004226)	cops4 (ENSLCAG00010004238)
Seriola	ANCESTRAL SPECIES	53	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603.n #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Greater amberjack	MODERN SPECIES	19																F2RL2 (ENSSDUG00000023403) #19	SV2C (ENSSDUG00000023404) #18	CERT1 (ENSSDUG00000023407) #13	hmgcrb (ENSSDUG00000023408) #12	GCNT4 (ENSSDUG00000023412) #10	lhx5 (ENSSDUG00000023414)	mzt2b (ENSSDUG00000023416)	trim23 (ENSSDUG00000023418)	ppwd1 (ENSSDUG00000023421)	cwc27 (ENSSDUG00000023425)	ADAMTS6 (ENSSDUG00000023427)	plac8.1 (ENSSDUG00000023434)	cops4 (ENSSDUG00000023438)	lin54 (ENSSDUG00000023444)	sec31a (ENSSDUG00000023451)	TMEM150C (ENSSDUG00000023464)
Yellowtail amberjack	MODERN SPECIES	3042	DMGDH (ENSSLDG00000014440) #37	ARSB (ENSSLDG00000014410) #36	lhfpl2a (ENSSLDG00000014391) #34	scamp1 (ENSSLDG00000014368) #33	AP3B1 (ENSSLDG00000014297) #31	tbca (ENSSLDG00000014269) #30	otpa (ENSSLDG00000014245) #29	wdr41 (ENSSLDG00000014187) #28	PDE8B (ENSSLDG00000014147) #27	crhbp (ENSSLDG00000014122) #24	s100z (ENSSLDG00000014112) #23	ch25hl2 (ENSSLDG00000014097)	f2rl1.2 (ENSSLDG00000014088) #22	f2rl1.1 (ENSSLDG00000014079) #22	f2r2.1 (ENSSLDG00000014072) #21	F2RL2 (ENSSLDG00000014063) #19	SV2C (ENSSLDG00000014039) #18	CERT1 (ENSSLDG00000013970) #13	hmgcrb (ENSSLDG00000013913) #12	GCNT4 (ENSSLDG00000013894) #10	lhx5 (ENSSLDG00000013882)	mzt2b (ENSSLDG00000013865)	trim23 (ENSSLDG00000013815)	ppwd1 (ENSSLDG00000013794)	cwc27 (ENSSLDG00000013750)	ADAMTS6 (ENSSLDG00000013672)	plac8.1 (ENSSLDG00000013652)	cops4 (ENSSLDG00000013604)	lin54 (ENSSLDG00000013557)	ENSSLDG00000013537
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Zig-zag eel	MODERN SPECIES	3	DMGDH (ENSMAMG00000003893) #37	ARSB (ENSMAMG00000003940) #36	LHFPL2 (ENSMAMG00000003982) #34	SCAMP1 (ENSMAMG00000004014) #33	AP3B1 (ENSMAMG00000004074) #31	tbca (ENSMAMG00000004128) #30	otpa (ENSMAMG00000004156) #29	wdr41 (ENSMAMG00000004169) #28	PDE8B (ENSMAMG00000004204) #27	crhbp (ENSMAMG00000004254) #24	s100z (ENSMAMG00000004265) #23	ch25hl2 (ENSMAMG00000004284)	f2rl1.2 (ENSMAMG00000004294) #22	f2rl1.1 (ENSMAMG00000004308) #22	f2r2.1 (ENSMAMG00000027882) #21	F2RL2 (ENSMAMG00000004316) #19	SV2C (ENSMAMG00000004324) #18	CERT1 (ENSMAMG00000004370) #13	ENSMAMG00000004461 #12	GCNT4 (ENSMAMG00000004514) #10	ENSMAMG00000004519	mzt2b (ENSMAMG00000004537)	ENSMAMG00000004557	ENSMAMG00000004609	ENSMAMG00000004661	ENSMAMG00000004760	plac8.1 (ENSMAMG00000004799)	COPS4 (ENSMAMG00000004815)	lin54 (ENSMAMG00000004854)	sec31a (ENSMAMG00000004874)	TMEM150C (ENSMAMG00000004946)
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a.f
Climbing perch	MODERN SPECIES	3	DMGDH (ENSATEG00000008607) #37	ARSB (ENSATEG00000008598) #36	LHFPL2 (ENSATEG00000008588) #34	SCAMP1 (ENSATEG00000008541) #33	AP3B1 (ENSATEG00000008505) #31	tbca (ENSATEG00000008490) #30	otpa (ENSATEG00000008473) #29	wdr41 (ENSATEG00000008464) #28	PDE8B (ENSATEG00000008314) #27	crhbp (ENSATEG00000008060) #24	s100z (ENSATEG00000008043) #23	ch25hl2 (ENSATEG00000008028)	f2rl1.2 (ENSATEG00000008020) #22	f2rl1.1 (ENSATEG00000026082) #22	f2r2.1 (ENSATEG00000029426) #21	F2RL2 (ENSATEG00000007994) #19	SV2C (ENSATEG00000007944) #18	CERT1 (ENSATEG00000007810) #13	ENSATEG00000007723 #12	GCNT4 (ENSATEG00000007703) #10	GCNT4 (ENSATEG00000007693) #10	ENSATEG00000007676	mzt2b (ENSATEG00000007666)	ENSATEG00000007627	ENSATEG00000007567	ENSATEG00000007557	ENSATEG00000007479	plac8.1 (ENSATEG00000026599)	COPS4 (ENSATEG00000007411)	lin54 (ENSATEG00000007360)	TMEM150C (ENSATEG00000007347)
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00440000039914
Tetraodon	MODERN SPECIES	19	DTWD2 (ENSTNIG00000013471)	ENSTNIG00000013472	JMY (ENSTNIG00000013473)	lhfpl2a (ENSTNIG00000013474) #34	scamp1 (ENSTNIG00000013475) #33	AP3B1 (ENSTNIG00000013476) #31	tbca (ENSTNIG00000000561) #30	otpa (ENSTNIG00000013477) #29	wdr41 (ENSTNIG00000013478) #28	PDE8B (ENSTNIG00000013479) #27	crhbp (ENSTNIG00000013480) #24	s100z (ENSTNIG00000013481) #23	ch25hl2 (ENSTNIG00000013482)	f2rl1.2 (ENSTNIG00000013483) #22	ENSTNIG00000000913 #22	F2RL2 (ENSTNIG00000013484) #19	SV2C (ENSTNIG00000013485) #18	CERT1 (ENSTNIG00000013486) #13	hmgcrb (ENSTNIG00000013487) #12	GCNT4 (ENSTNIG00000013488) #10	lhx5 (ENSTNIG00000013489)	trim23 (ENSTNIG00000013490)	ppwd1 (ENSTNIG00000013491)	cwc27 (ENSTNIG00000013492)	ADAMTS6 (ENSTNIG00000013493)	plac8.1 (ENSTNIG00000013494)	cops4 (ENSTNIG00000013495)	lin54 (ENSTNIG00000013496)	sec31a (ENSTNIG00000013497)	enoph1 (ENSTNIG00000013498)	hnrnpd (ENSTNIG00000013499)
Fugu	MODERN SPECIES	18	ARSB (ENSTRUG00000003412) #36	ENSTRUG00000026160	lhfpl2a (ENSTRUG00000022518) #34	scamp1 (ENSTRUG00000018272) #33	AP3B1 (ENSTRUG00000018286) #31	tbca (ENSTRUG00000018312) #30	otpa (ENSTRUG00000018317) #29	wdr41 (ENSTRUG00000018319) #28	PDE8B (ENSTRUG00000018324) #27	crhbp (ENSTRUG00000018344) #24	s100z (ENSTRUG00000029087) #23	ch25hl2 (ENSTRUG00000018350)	f2rl1.2 (ENSTRUG00000025409) #22	f2rl1.1 (ENSTRUG00000018352) #22	SV2C (ENSTRUG00000018362) #18	F2RL2 (ENSTRUG00000027056) #19	CERT1 (ENSTRUG00000018369) #13	hmgcrb (ENSTRUG00000018375) #12	GCNT4 (ENSTRUG00000018386) #10	lhx5 (ENSTRUG00000018387)	mzt2b (ENSTRUG00000020389)	trim23 (ENSTRUG00000018393)	ppwd1 (ENSTRUG00000018397)	cwc27 (ENSTRUG00000018406)	ADAMTS6 (ENSTRUG00000018410)	plac8 (ENSTRUG00000027976)	cops4 (ENSTRUG00000018422)	lin54 (ENSTRUG00000018428)	sec31a (ENSTRUG00000018434)	enoph1 (ENSTRUG00000018448)	hnrnpd (ENSTRUG00000018450)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Ballan wrasse	MODERN SPECIES	528		ENSLBEG00000026912 #31	AP3B1 (ENSLBEG00000026927) #31	tbca (ENSLBEG00000026946) #30	ENSLBEG00000026976	otpa (ENSLBEG00000027017) #29	wdr41 (ENSLBEG00000027031) #28	PDE8B (ENSLBEG00000027056) #27	crhbp (ENSLBEG00000027080) #24	s100z (ENSLBEG00000027087) #23	ch25hl2 (ENSLBEG00000027095)	f2rl1.2 (ENSLBEG00000027102) #22	f2rl1.1 (ENSLBEG00000027106) #22	F2R (ENSLBEG00000027117) #21	F2R (ENSLBEG00000027145) #21	F2RL2 (ENSLBEG00000027190) #19	SV2C (ENSLBEG00000027198) #18
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125.n #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010008789	ENSSAUG00010008788	crhbp (ENSSAUG00010008786) #24	s100z (ENSSAUG00010008785) #23	ch25hl2 (ENSSAUG00010008783)	PDE8B (ENSSAUG00010005798) #27	f2rl1.2 (ENSSAUG00010005746) #22	ENSSAUG00010005745	f2rl1.1 (ENSSAUG00010005743) #22	F2R (ENSSAUG00010005740) #21	F2R (ENSSAUG00010005737) #21	F2R (ENSSAUG00010005734) #21	F2R (ENSSAUG00010005733) #21	F2R (ENSSAUG00010005731) #21	F2R (ENSSAUG00010005729) #21	F2RL2 (ENSSAUG00010005726) #19	SV2C (ENSSAUG00010005160) #18	ENSSAUG00010005153	CERT1 (ENSSAUG00010002220) #13	hmgcrb (ENSSAUG00010001711) #12	GCNT4 (ENSSAUG00010001654) #10	lhx5 (ENSSAUG00010001645)	mzt2b (ENSSAUG00010001633)	ENSSAUG00010001610	ENSSAUG00010001586	ENSSAUG00010001573	ENSSAUG00010001567	ENSSAUG00010001561	ENSSAUG00010001553	ENSSAUG00010001527	ENSSAUG00010001485
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125.n #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
European seabass	MODERN SPECIES	9	JMY (ENSDLAG00005000911)	bhmt (ENSDLAG00005000880)	DMGDH (ENSDLAG00005000598) #37	ARSB (ENSDLAG00005023776) #36	LHFPL2 (ENSDLAG00005023771) #34	SCAMP1 (ENSDLAG00005034904) #33	AP3B1 (ENSDLAG00005022652) #31	otpa (ENSDLAG00005022587) #29	wdr41 (ENSDLAG00005022564) #28	PDE8B (ENSDLAG00005022099) #27	crhbp (ENSDLAG00005022074) #24	s100z (ENSDLAG00005022069) #23	ch25hl2 (ENSDLAG00005022068)	f2rl1.2 (ENSDLAG00005022063) #22	f2r2.1 (ENSDLAG00005022061) #21	F2RL2 (ENSDLAG00005022059) #19	SV2C (ENSDLAG00005022048) #18	CERT1 (ENSDLAG00005021764) #13	hmgcrb (ENSDLAG00005021232) #12	GCNT4 (ENSDLAG00005027499) #10	ENSDLAG00005028991	mzt2b (ENSDLAG00005031291)	ENSDLAG00005013686	ENSDLAG00005021185	ENSDLAG00005021155	ENSDLAG00005020960	plac8.1 (ENSDLAG00005020949)	COPS4 (ENSDLAG00005020910)	lin54 (ENSDLAG00005020845)	SEC31A (ENSDLAG00005020508)	mat2al (ENSDLAG00005020467)
Large yellow croaker	MODERN SPECIES	4	bhmt (ENSLCRG00005011814)	ARSB (ENSLCRG00005011801) #36	lhfpl2a (ENSLCRG00005011798) #34	scamp1 (ENSLCRG00005011792) #33	AP3B1 (ENSLCRG00005010933) #31	tbca (ENSLCRG00005010923) #30	otpa (ENSLCRG00005010920) #29	wdr41 (ENSLCRG00005010827) #28	PDE8B (ENSLCRG00005010781) #27	crhbp (ENSLCRG00005010764) #24	ch25hl2 (ENSLCRG00005010760)	s100z (ENSLCRG00005010758) #23	f2rl1.2 (ENSLCRG00005010757) #22	f2rl1.1 (ENSLCRG00005010756) #22	f2r2.1 (ENSLCRG00005010755) #21	F2RL2 (ENSLCRG00005010753) #19	SV2C (ENSLCRG00005010695) #18	CERT1 (ENSLCRG00005008123) #13	hmgcrb (ENSLCRG00005007812) #12	GCNT4 (ENSLCRG00005007802) #10	lhx5 (ENSLCRG00005007797)	mzt2b (ENSLCRG00005007793)	polm (ENSLCRG00005007689)	ved (ENSLCRG00005007685)	PURB (ENSLCRG00005007682)	ENSLCRG00005007680	CNNM3 (ENSLCRG00005007677)	CNNM4 (ENSLCRG00005007667)	ENSLCRG00005007382	ENSLCRG00005007072	ENSLCRG00005007068
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.a.a.g #22	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00440000039914
Stickleback	MODERN SPECIES	13	HOMER1 (ENSGACG00000015784)	JMY (ENSGACG00000015780)	bhmt (ENSGACG00000015778)	DMGDH (ENSGACG00000015777) #37	ARSB (ENSGACG00000015775) #36	AP3B1 (ENSGACG00000015772) #31	tbca (ENSGACG00000015771) #30	otpa (ENSGACG00000015770) #29	wdr41 (ENSGACG00000015762) #28	PDE8B (ENSGACG00000015761) #27	crhbp (ENSGACG00000015759) #24	s100z (ENSGACG00000015758) #23	ch25hl2 (ENSGACG00000015757)	f2rl1.2 (ENSGACG00000015756) #22	ENSGACG00000015755 #22	F2RL2 (ENSGACG00000015753) #19	SV2C (ENSGACG00000015751) #18	CERT1 (ENSGACG00000015744) #13	hmgcrb (ENSGACG00000015741) #12	GCNT4 (ENSGACG00000015737) #10	mzt2b (ENSGACG00000015736)	trim23 (ENSGACG00000015730)	ppwd1 (ENSGACG00000015717)	cwc27 (ENSGACG00000015712)	ADAMTS6 (ENSGACG00000015707)	plac8.1 (ENSGACG00000015705)	cops4 (ENSGACG00000015697)	lin54 (ENSGACG00000015693)	sec31a (ENSGACG00000015685)	enoph1 (ENSGACG00000015673)	hnrnpd (ENSGACG00000015669)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000158176 #37	ENSGT00940000158270 #36	ENSGT00990000203589.b.b #34	ENSGT00940000157310.g #33	ENSGT00940000157603 #31	ENSGT00390000009710 #30	ENSGT00940000159952.a.b #29	ENSGT00390000017026 #28	ENSGT00940000157817 #27	ENSGT00390000001362.b #24	ENSGT00940000161125 #23	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b #22	ENSGT01050000244840.A.a.a.h.a #22	ENSGT01050000244840.A.a.b.f #21	ENSGT01050000244840.A.b.b.b #19	ENSGT00950000182940.b.b.f #18	ENSGT00940000155123.b.b #13	ENSGT00940000155305.b.b #12	ENSGT00940000159721.h #10	ENSGT00940000166328	ENSGT00390000014845	ENSGT00940000158562	ENSGT00940000158733	ENSGT00940000155967	ENSGT00940000156571	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Pike perch	MODERN SPECIES	33	lhfpl2a (ENSSLUG00000011761) #34	scamp1 (ENSSLUG00000011766) #33	AP3B1 (ENSSLUG00000011801) #31	tbca (ENSSLUG00000011926) #30	otpa (ENSSLUG00000011935) #29	wdr41 (ENSSLUG00000011958) #28	PDE8B (ENSSLUG00000012130) #27	crhbp (ENSSLUG00000012137) #24	s100z (ENSSLUG00000012144) #23	ch25hl2 (ENSSLUG00000012148)	f2rl1.2 (ENSSLUG00000012151) #22	f2rl1.1 (ENSSLUG00000012154) #22	f2rl1.1 (ENSSLUG00000012156) #22	f2rl1.1 (ENSSLUG00000012162) #22	f2r2.1 (ENSSLUG00000012165) #21	F2RL2 (ENSSLUG00000012168) #19	SV2C (ENSSLUG00000012183) #18	CERT1 (ENSSLUG00000012625) #13	hmgcrb (ENSSLUG00000014926) #12	GCNT4 (ENSSLUG00000015667) #10	lhx5 (ENSSLUG00000015671)	mzt2b (ENSSLUG00000015678)	trim23 (ENSSLUG00000015714)	ppwd1 (ENSSLUG00000016134)	cwc27 (ENSSLUG00000016168)	ADAMTS6 (ENSSLUG00000016185)	PLAC8 (ENSSLUG00000016285)
Channel bull blenny	MODERN SPECIES	3	bhmt (ENSCGOG00000019370)	DMGDH (ENSCGOG00000018919) #37	ARSB (ENSCGOG00000018860) #36	lhfpl2a (ENSCGOG00000018856) #34	scamp1 (ENSCGOG00000018847) #33	AP3B1 (ENSCGOG00000018679) #31	tbca (ENSCGOG00000018671) #30	otpa (ENSCGOG00000018661) #29	wdr41 (ENSCGOG00000018568) #28	PDE8B (ENSCGOG00000017917) #27	crhbp (ENSCGOG00000017890) #24	s100z (ENSCGOG00000017887) #23	f2rl1.2 (ENSCGOG00000017882) #22	f2rl1.1 (ENSCGOG00000017880) #22	f2r2.1 (ENSCGOG00000017879) #21	ENSCGOG00000017878 #19	SV2C (ENSCGOG00000017410) #18	CERT1 (ENSCGOG00000016569) #13	hmgcrb (ENSCGOG00000016256) #12	GCNT4 (ENSCGOG00000016250) #10	lhx5 (ENSCGOG00000016241)	mzt2b (ENSCGOG00000016240)	trim23 (ENSCGOG00000016037)	ppwd1 (ENSCGOG00000015933)	cwc27 (ENSCGOG00000015627)	ADAMTS6 (ENSCGOG00000015595)	plac8.1 (ENSCGOG00000015587)	cops4 (ENSCGOG00000015563)	lin54 (ENSCGOG00000015485)	sec31a (ENSCGOG00000011628)	TMEM150C (ENSCGOG00000011547)
Pinecone sodierfish	MODERN SPECIES	3	DMGDH (ENSMMDG00005006293) #37	ARSB (ENSMMDG00005006283) #36	lhfpl2a (ENSMMDG00005006275) #34	scamp1 (ENSMMDG00005006270) #33	AP3B1 (ENSMMDG00005005969) #31	tbca (ENSMMDG00005005944) #30	otpa (ENSMMDG00005005938) #29	wdr41 (ENSMMDG00005005908) #28	PDE8B (ENSMMDG00005005550) #27	crhbp (ENSMMDG00005005426) #24	s100z (ENSMMDG00005005417) #23	ch25hl2 (ENSMMDG00005005410)	f2rl1.2 (ENSMMDG00005005408) #22	f2rl1.1 (ENSMMDG00005005405) #22	f2r2.1 (ENSMMDG00005005400) #21	F2RL2 (ENSMMDG00005005395) #19	SV2C (ENSMMDG00005004990) #18	CERT1 (ENSMMDG00005004619) #13	hmgcrb (ENSMMDG00005004551) #12	GCNT4 (ENSMMDG00005004536) #10	lhx5 (ENSMMDG00005004528)	mzt2b (ENSMMDG00005004523)	trim23 (ENSMMDG00005003417)	ppwd1 (ENSMMDG00005003414)	cwc27 (ENSMMDG00005003407)	ADAMTS6 (ENSMMDG00005003397)	plac8.1 (ENSMMDG00005003391)	ENSMMDG00005003389	cops4 (ENSMMDG00005003373)	lin54 (ENSMMDG00005003009)	ENSMMDG00005002976
Spotted gar	MODERN SPECIES	658	AP3B1 (ENSLOCG00000005786) #31	tbca (ENSLOCG00000005775) #30	otpa (ENSLOCG00000005761) #29	wdr41 (ENSLOCG00000005746) #28	PDE8B (ENSLOCG00000005705) #27	aggf1 (ENSLOCG00000005688) #25	crhbp (ENSLOCG00000005670) #24	s100z (ENSLOCG00000005654) #23	ENSLOCG00000005613	ch25hl2 (ENSLOCG00000017529)	F2RL1 (ENSLOCG00000005593) #22	F2RL1 (ENSLOCG00000005575) #22	F2R (ENSLOCG00000017528) #21	F2R (ENSLOCG00000017527) #21	F2R (ENSLOCG00000017526) #21	F2RL2 (ENSLOCG00000017525) #19	iqgap2 (ENSLOCG00000005540) ##20	sv2ca (ENSLOCG00000005520) #18	ENSLOCG00000005510	ANKDD1B (ENSLOCG00000005494) #15	POLK (ENSLOCG00000005477) #14	CERT1 (ENSLOCG00000005451) #13	hmgcra (ENSLOCG00000005433) #12	ENSLOCG00000005414 #11	gcnt4a (ENSLOCG00000017524) #10	FAM169A (ENSLOCG00000005396) #9	nsa2 (ENSLOCG00000005380) #7	gfm2 (ENSLOCG00000005368)	ACOT12 (ENSLOCG00000005352)	zcchc9 (ENSLOCG00000005331)	ckmt2a (ENSLOCG00000005314)
Reedfish	MODERN SPECIES	15	ARSB (ENSECRG00000005042) #36	lhfpl2a (ENSECRG00000005036) #34	scamp1 (ENSECRG00000005024) #33	AP3B1 (ENSECRG00000005004) #31	tbca (ENSECRG00000004988) #30	otpa (ENSECRG00000004985) #29	wdr41 (ENSECRG00000004971) #28	PDE8B (ENSECRG00000004936) #27	aggf1 (ENSECRG00000004908) #25	crhbp (ENSECRG00000004895) #24	s100z (ENSECRG00000004884) #23	ENSECRG00000004877	ch25hl2 (ENSECRG00000004872)	f2rl1.1 (ENSECRG00000004864) #22	f2r2.1 (ENSECRG00000004853) #21	F2RL2 (ENSECRG00000004843) #19	iqgap2 (ENSECRG00000016760) ##20	sv2ca (ENSECRG00000016710) #18	ENSECRG00000016694	ENSECRG00000016683	ENSECRG00000016654	ANKDD1B (ENSECRG00000016596) #15	POLK (ENSECRG00000016538) #14	CERT1 (ENSECRG00000016356) #13	hmgcra (ENSECRG00000016297) #12	ENSECRG00000016271	gcnt4a (ENSECRG00000016254) #10	FAM169A (ENSECRG00000016228) #9	nsa2 (ENSECRG00000016209) #7	gfm2 (ENSECRG00000015932)	hexb (ENSECRG00000015849)
Elephant shark	MODERN SPECIES	1625			tbca (ENSCMIG00000001877) #30	otpa (ENSCMIG00000001871) #29	wdr41 (ENSCMIG00000001693) #28	ENSCMIG00000001540 #27	ENSCMIG00000001456	aggf1 (ENSCMIG00000001406) #25	crhbp (ENSCMIG00000001390) #24	s100z (ENSCMIG00000001333) #23	ch25hl2 (ENSCMIG00000001313)	ENSCMIG00000001311	f2rl1.1 (ENSCMIG00000001302) #22	ENSCMIG00000001298 #21	F2R (ENSCMIG00000001296) #21	F2RL2 (ENSCMIG00000001290) #19	ENSCMIG00000000914 ##20	sv2ca (ENSCMIG00000000779) #18	ENSCMIG00000000756	ENSCMIG00000000736 #15	ENSCMIG00000000718 #14	ENSCMIG00000000705 #14	ENSCMIG00000000697 #14	CERT1 (ENSCMIG00000000500) #13	hmgcra (ENSCMIG00000000216) #12	ENSCMIG00000018072	ENSCMIG00000018068	gcnt4a (ENSCMIG00000018065) #10	ENSCMIG00000018062 #9	nsa2 (ENSCMIG00000018058) #7	gfm2 (ENSCMIG00000018002)