Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00900000143551	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00940000172524	ENSGT00390000005100 #35
Rodentia_B	ANCESTRAL SPECIES	42	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Myomorpha	ANCESTRAL SPECIES	51	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Muroidea	ANCESTRAL SPECIES	58	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Mus	ANCESTRAL SPECIES	4	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143.c #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Mouse	MODERN SPECIES	18	Ldlr (ENSMUSG00000032193) #7	Smarca4 (ENSMUSG00000032187) #8	Timm29 (ENSMUSG00000048429) #9	Yipf2 (ENSMUSG00000032182) #10	Carm1 (ENSMUSG00000032185) #11	AB124611 (ENSMUSG00000057191) #12	Tmed1 (ENSMUSG00000032180) #13	Dnm2 (ENSMUSG00000033335) #14	Qtrt1 (ENSMUSG00000002825) #15	Ilf3 (ENSMUSG00000032178) #16	Slc44a2 (ENSMUSG00000057193) #17	Ap1m2 (ENSMUSG00000003309) #18	Cdkn2d (ENSMUSG00000096472) #19	Kri1 (ENSMUSG00000035047) #20	Atg4d (ENSMUSG00000002820) #21	S1pr5 (ENSMUSG00000045087) #22	Keap1 (ENSMUSG00000003308) #23	Pde4a (ENSMUSG00000032177) #24	Cdc37 (ENSMUSG00000019471) #25	Tyk2 (ENSMUSG00000032175) #26	Raver1 (ENSMUSG00000010205) #27	Fdx2 (ENSMUSG00000079677) #28	Zglp1 (ENSMUSG00000079681) #29	Icam5 (ENSMUSG00000032174) #30	Icam4 (ENSMUSG00000001014) #31	Icam1 (ENSMUSG00000037405) #32	Mrpl4 (ENSMUSG00000003299) #33	S1pr2 (ENSMUSG00000043895) #34	Dnmt1 (ENSMUSG00000004099) #35	Eif3g (ENSMUSG00000070319) #36	Ppan (ENSMUSG00000004100) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143.c #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
spretus	MODERN SPECIES	18	Ldlr (MGP_SPRETEiJ_G0033004) #7	Smarca4 (MGP_SPRETEiJ_G0033003) #8	Timm29 (MGP_SPRETEiJ_G0033002) #9	Yipf2 (MGP_SPRETEiJ_G0033001) #10	Carm1 (MGP_SPRETEiJ_G0033000) #11	AB124611 (MGP_SPRETEiJ_G0032999) #12	Tmed1 (MGP_SPRETEiJ_G0032998) #13	Dnm2 (MGP_SPRETEiJ_G0032997) #14	Qtrt1 (MGP_SPRETEiJ_G0032996) #15	Ilf3 (MGP_SPRETEiJ_G0032995) #16	Slc44a2 (MGP_SPRETEiJ_G0032994) #17	Ap1m2 (MGP_SPRETEiJ_G0032993) #18	Cdkn2d (MGP_SPRETEiJ_G0032992) #19	Kri1 (MGP_SPRETEiJ_G0032991) #20	Atg4d (MGP_SPRETEiJ_G0032990) #21	S1pr5 (MGP_SPRETEiJ_G0032989) #22	Keap1 (MGP_SPRETEiJ_G0032988) #23	Pde4a (MGP_SPRETEiJ_G0032987) #24	Cdc37 (MGP_SPRETEiJ_G0032986) #25	Tyk2 (MGP_SPRETEiJ_G0032985) #26	Raver1 (MGP_SPRETEiJ_G0032984) #27	Fdx2 (MGP_SPRETEiJ_G0032983) #28	Zglp1 (MGP_SPRETEiJ_G0032982) #29	Icam5 (MGP_SPRETEiJ_G0032981) #30	Icam4 (MGP_SPRETEiJ_G0032980) #31	Icam1 (MGP_SPRETEiJ_G0032979) #32	Mrpl4 (MGP_SPRETEiJ_G0032978) #33	S1pr2 (MGP_SPRETEiJ_G0032977) #34	Dnmt1 (MGP_SPRETEiJ_G0032976) #35	Eif3g (MGP_SPRETEiJ_G0032975) #36	Ppan (MGP_SPRETEiJ_G0032974) #37
Steppe mouse	MODERN SPECIES	3115	Spc24 (ENSMSIG00000015419)	Ldlr (ENSMSIG00000015469) #7	Smarca4 (ENSMSIG00000015575) #8	Carm1 (ENSMSIG00000015744) #11	Yipf2 (ENSMSIG00000015831) #10	AB124611 (ENSMSIG00000015890) #12	Tmed1 (ENSMSIG00000015965) #13	Dnm2 (ENSMSIG00000015982) #14	Qtrt1 (ENSMSIG00000016262) #15	Ilf3 (ENSMSIG00000016302) #16	Slc44a2 (ENSMSIG00000016395) #17	Ap1m2 (ENSMSIG00000016529) #18	Cdkn2d (ENSMSIG00000016582) #19	Kri1 (ENSMSIG00000016603) #20	Atg4d (ENSMSIG00000016653) #21	S1pr5 (ENSMSIG00000016710) #22	Keap1 (ENSMSIG00000016713) #23	Pde4a (ENSMSIG00000016751) #24	Cdc37 (ENSMSIG00000016922) #25	Tyk2 (ENSMSIG00000016941) #26	Raver1 (ENSMSIG00000017020) #27	Fdx2 (ENSMSIG00000017053) #28	Zglp1 (ENSMSIG00000017087) #29	Icam5 (ENSMSIG00000017102) #30	Icam4 (ENSMSIG00000017145) #31	Icam1 (ENSMSIG00000017165) #32	Mrpl4 (ENSMSIG00000017179) #33	S1pr2 (ENSMSIG00000017197) #34	Dnmt1 (ENSMSIG00000017200) #35	Eif3g (ENSMSIG00000017537) #36	Ppan (ENSMSIG00000017577) #37
Ryukyu mouse	MODERN SPECIES	18	Ldlr (MGP_CAROLIEiJ_G0031880) #7	Smarca4 (MGP_CAROLIEiJ_G0031879) #8	Timm29 (MGP_CAROLIEiJ_G0031878) #9	Yipf2 (MGP_CAROLIEiJ_G0031877) #10	Carm1 (MGP_CAROLIEiJ_G0031876) #11	AB124611 (MGP_CAROLIEiJ_G0031875) #12	Tmed1 (MGP_CAROLIEiJ_G0031874) #13	Dnm2 (MGP_CAROLIEiJ_G0031873) #14	Qtrt1 (MGP_CAROLIEiJ_G0031872) #15	Ilf3 (MGP_CAROLIEiJ_G0031871) #16	Slc44a2 (MGP_CAROLIEiJ_G0031870) #17	Ap1m2 (MGP_CAROLIEiJ_G0031869) #18	Cdkn2d (MGP_CAROLIEiJ_G0031868) #19	Kri1 (MGP_CAROLIEiJ_G0031867) #20	Atg4d (MGP_CAROLIEiJ_G0031866) #21	S1pr5 (MGP_CAROLIEiJ_G0031865) #22	Keap1 (MGP_CAROLIEiJ_G0031864) #23	Pde4a (MGP_CAROLIEiJ_G0031863) #24	Cdc37 (MGP_CAROLIEiJ_G0031862) #25	Tyk2 (MGP_CAROLIEiJ_G0031861) #26	Raver1 (MGP_CAROLIEiJ_G0031860) #27	Fdx2 (MGP_CAROLIEiJ_G0031859) #28	Zglp1 (MGP_CAROLIEiJ_G0031858) #29	Icam5 (MGP_CAROLIEiJ_G0031857) #30	Icam4 (MGP_CAROLIEiJ_G0031856) #31	Icam1 (MGP_CAROLIEiJ_G0031855) #32	Mrpl4 (MGP_CAROLIEiJ_G0031854) #33	S1pr2 (MGP_CAROLIEiJ_G0031853) #34	Dnmt1 (MGP_CAROLIEiJ_G0031852) #35	Eif3g (MGP_CAROLIEiJ_G0031851) #36	Ppan (MGP_CAROLIEiJ_G0031850) #37
Shrew mouse	MODERN SPECIES	1	Ldlr (MGP_PahariEiJ_G0014746) #7	Smarca4 (MGP_PahariEiJ_G0014745) #8	Timm29 (MGP_PahariEiJ_G0014744) #9	Yipf2 (MGP_PahariEiJ_G0014743) #10	Carm1 (MGP_PahariEiJ_G0014742) #11	AB124611 (MGP_PahariEiJ_G0014741) #12	Tmed1 (MGP_PahariEiJ_G0014740) #13	Dnm2 (MGP_PahariEiJ_G0014739) #14	Qtrt1 (MGP_PahariEiJ_G0014738) #15	Ilf3 (MGP_PahariEiJ_G0014737) #16	Slc44a2 (MGP_PahariEiJ_G0014736) #17	Ap1m2 (MGP_PahariEiJ_G0014735) #18	Cdkn2d (MGP_PahariEiJ_G0014734) #19	Kri1 (MGP_PahariEiJ_G0014733) #20	Atg4d (MGP_PahariEiJ_G0014732) #21	S1pr5 (MGP_PahariEiJ_G0014731) #22	Keap1 (MGP_PahariEiJ_G0014730) #23	Pde4a (MGP_PahariEiJ_G0014729) #24	Cdc37 (MGP_PahariEiJ_G0014728) #25	Tyk2 (MGP_PahariEiJ_G0014727) #26	Raver1 (MGP_PahariEiJ_G0014726) #27	Fdx2 (MGP_PahariEiJ_G0014725) #28	Zglp1 (MGP_PahariEiJ_G0014724) #29	Icam5 (MGP_PahariEiJ_G0014723) #30	Icam4 (MGP_PahariEiJ_G0014722) #31	Icam1 (MGP_PahariEiJ_G0014721) #32	Mrpl4 (MGP_PahariEiJ_G0014720) #33	S1pr2 (MGP_PahariEiJ_G0014719) #34	Dnmt1 (MGP_PahariEiJ_G0014718) #35	Eif3g (MGP_PahariEiJ_G0014717) #36	Ppan (MGP_PahariEiJ_G0014716) #37
Rat	MODERN SPECIES	18	Spc24 (ENSRNOG00000029862)	Ldlr (ENSRNOG00000009946) #7	Smarca4 (ENSRNOG00000009271) #8	Yipf2 (ENSRNOG00000022043) #10	Carm1 (ENSRNOG00000031129) #11	LOC691141 (ENSRNOG00000033256) #12	Tmed1 (ENSRNOG00000008037) #13	Dnm2 (ENSRNOG00000007649) #14	Qtrt1 (ENSRNOG00000007158) #15	Ilf3 (ENSRNOG00000022741) #16	Slc44a2 (ENSRNOG00000031824) #17	Ap1m2 (ENSRNOG00000043093) #18	Cdkn2d (ENSRNOG00000064248) #19	Kri1 (ENSRNOG00000057447) #20	Atg4d (ENSRNOG00000047625) #21	S1pr5 (ENSRNOG00000020901) #22	Keap1 (ENSRNOG00000020878) #23	Pde4a (ENSRNOG00000020828) #24	Cdc37 (ENSRNOG00000033426) #25	Tyk2 (ENSRNOG00000032948) #26	Raver1 (ENSRNOG00000020710) #27	Fdx2 (ENSRNOG00000023020) #28	Zglp1 (ENSRNOG00000042601) #29	Icam5 (ENSRNOG00000020694) #30	Icam4 (ENSRNOG00000042078) #31	Icam1 (ENSRNOG00000020679) #32	Mrpl4 (ENSRNOG00000020659) #33	S1pr2 (ENSRNOG00000020653) #34	Dnmt1 (ENSRNOG00000039859) #35	Eif3g (ENSRNOG00000020619) #36	Ppan (ENSRNOG00000020608) #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Cricetinae	ANCESTRAL SPECIES	30	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Chinese hamster chok1gshd	MODERN SPECIES	189	Ldlr (ENSCGRG00001014331) #7	Smarca4 (ENSCGRG00001016732) #8	Timm29 (ENSCGRG00001007273) #9	Yipf2 (ENSCGRG00001005089) #10	Carm1 (ENSCGRG00001023212) #11	AB124611 (ENSCGRG00001019412) #12	Tmed1 (ENSCGRG00001018097) #13	Dnm2 (ENSCGRG00001015804) #14	Qtrt1 (ENSCGRG00001001152) #15	Ilf3 (ENSCGRG00001021577) #16	Slc44a2 (ENSCGRG00001014087) #17	Ap1m2 (ENSCGRG00001020691) #18	Cdkn2d (ENSCGRG00001019561) #19	Kri1 (ENSCGRG00001018764) #20	Atg4d (ENSCGRG00001017644) #21	S1pr5 (ENSCGRG00001009679) #22	Keap1 (ENSCGRG00001016562) #23	Pde4a (ENSCGRG00001014442) #24	ENSCGRG00001017764 #25	Tyk2 (ENSCGRG00001016315) #26	Raver1 (ENSCGRG00001013260) #27	Fdx2 (ENSCGRG00001012584) #28	Zglp1 (ENSCGRG00001002376) #29	Icam5 (ENSCGRG00001000449) #30	Icam4 (ENSCGRG00001018219) #31	Icam1 (ENSCGRG00001015045) #32	Mrpl4 (ENSCGRG00001013642) #33	S1pr2 (ENSCGRG00001016552) #34	Dnmt1 (ENSCGRG00001022275) #35	EIF3G (ENSCGRG00001017726) #36	Ppan (ENSCGRG00001015990) #37
Golden Hamster	MODERN SPECIES	700	Ldlr (ENSMAUG00000018237) #7	Smarca4 (ENSMAUG00000020731) #8	Timm29 (ENSMAUG00000016236) #9	Yipf2 (ENSMAUG00000019367) #10	Carm1 (ENSMAUG00000020443) #11	Tmed1 (ENSMAUG00000008835) #13	ENSMAUG00000013381 #14	ENSMAUG00000019307 #14	Qtrt1 (ENSMAUG00000020794) #15	Ilf3 (ENSMAUG00000020405) #16	Slc44a2 (ENSMAUG00000010847) #17	Ap1m2 (ENSMAUG00000012894) #18	Cdkn2d (ENSMAUG00000001161) #19	Kri1 (ENSMAUG00000011484) #20	Atg4d (ENSMAUG00000020205) #21	S1pr5 (ENSMAUG00000000259) #22	Keap1 (ENSMAUG00000007914) #23	Pde4a (ENSMAUG00000013828) #24	Cdc37 (ENSMAUG00000008486) #25	Tyk2 (ENSMAUG00000017865) #26	Raver1 (ENSMAUG00000017948) #27	Fdx2 (ENSMAUG00000016958) #28	Zglp1 (ENSMAUG00000000170) #29	Icam5 (ENSMAUG00000001262) #30	Icam4 (ENSMAUG00000002833) #31	Icam1 (ENSMAUG00000006369) #32	Mrpl4 (ENSMAUG00000013451) #33	S1pr2 (ENSMAUG00000016946) #34	Dnmt1 (ENSMAUG00000019579) #35	Eif3g (ENSMAUG00000003373) #36	Ppan (ENSMAUG00000000310) #37
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Northern American deer mouse	MODERN SPECIES	20	Ldlr (ENSPEMG00000021260) #7	Smarca4 (ENSPEMG00000020389) #8	Timm29 (ENSPEMG00000031004) #9	Yipf2 (ENSPEMG00000022941) #10	Carm1 (ENSPEMG00000023286) #11	AB124611 (ENSPEMG00000011218) #12	Tmed1 (ENSPEMG00000014342) #13	Dnm2 (ENSPEMG00000022844) #14	Qtrt1 (ENSPEMG00000009897) #15	ENSPEMG00000000465 #16	Slc44a2 (ENSPEMG00000008320) #17	Ap1m2 (ENSPEMG00000023352) #18	Cdkn2d (ENSPEMG00000030087) #19	Kri1 (ENSPEMG00000024201) #20	Atg4d (ENSPEMG00000004633) #21	S1pr5 (ENSPEMG00000015460) #22	Keap1 (ENSPEMG00000022907) #23	Pde4a (ENSPEMG00000023071) #24	Cdc37 (ENSPEMG00000023710) #25	Tyk2 (ENSPEMG00000011071) #26	Raver1 (ENSPEMG00000016411) #27	Fdx2 (ENSPEMG00000023101) #28	Zglp1 (ENSPEMG00000023438) #29	Icam5 (ENSPEMG00000008387) #30	Icam4 (ENSPEMG00000023979) #31	Icam1 (ENSPEMG00000024025) #32	Mrpl4 (ENSPEMG00000017474) #33	S1pr2 (ENSPEMG00000030885) #34	ENSPEMG00000004880 #35	Eif3g (ENSPEMG00000001978) #36	Ppan (ENSPEMG00000015393) #37
Prairie vole	MODERN SPECIES	13	Ldlr (ENSMOCG00000016718) #7	Smarca4 (ENSMOCG00000022209) #8	ENSMOCG00000019898 #9	Yipf2 (ENSMOCG00000017806) #10	Carm1 (ENSMOCG00000004215) #11	AB124611 (ENSMOCG00000014256) #12	Tmed1 (ENSMOCG00000007785) #13	Dnm2 (ENSMOCG00000018580) #14	Qtrt1 (ENSMOCG00000019584) #15	Ilf3 (ENSMOCG00000018740) #16	Slc44a2 (ENSMOCG00000014267) #17	Ap1m2 (ENSMOCG00000000638) #18	Cdkn2d (ENSMOCG00000016257) #19	Kri1 (ENSMOCG00000017013) #20	Atg4d (ENSMOCG00000002959) #21	S1pr5 (ENSMOCG00000005836) #22	Keap1 (ENSMOCG00000009445) #23	Pde4a (ENSMOCG00000007095) #24	Cdc37 (ENSMOCG00000020700) #25	Tyk2 (ENSMOCG00000017994) #26	Raver1 (ENSMOCG00000015553) #27	Fdx2 (ENSMOCG00000014317) #28	Zglp1 (ENSMOCG00000011301) #29	Icam5 (ENSMOCG00000002626) #30	Icam4 (ENSMOCG00000019163) #31	ENSMOCG00000013950	Icam1 (ENSMOCG00000013230) #32	Mrpl4 (ENSMOCG00000014755) #33	S1pr2 (ENSMOCG00000013385) #34	Dnmt1 (ENSMOCG00000013903) #35	ENSMOCG00000016861 #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1514						ENSNGAG00000001659	Tmed1 (ENSNGAG00000004594) #13	Dnm2 (ENSNGAG00000016299) #14	Qtrt1 (ENSNGAG00000012294) #15	ENSNGAG00000009786 #16	Slc44a2 (ENSNGAG00000000063) #17	Ap1m2 (ENSNGAG00000013508) #18	Cdkn2d (ENSNGAG00000020636) #19	Kri1 (ENSNGAG00000000508) #20	Atg4d (ENSNGAG00000000291) #21	S1pr5 (ENSNGAG00000011944) #22	Keap1 (ENSNGAG00000012825) #23	Pde4a (ENSNGAG00000016357) #24	Cdc37 (ENSNGAG00000017380) #25	Tyk2 (ENSNGAG00000003917) #26	Raver1 (ENSNGAG00000001260) #27	Fdx2 (ENSNGAG00000009605) #28	Zglp1 (ENSNGAG00000015996) #29	Icam5 (ENSNGAG00000017094) #30	Icam4 (ENSNGAG00000001140) #31	Icam1 (ENSNGAG00000014166) #32	Mrpl4 (ENSNGAG00000014705) #33	S1pr2 (ENSNGAG00000000186) #34	Dnmt1 (ENSNGAG00000010277) #35	Eif3g (ENSNGAG00000012159) #36	Ppan (ENSNGAG00000012813) #37
Lesser Egyptian jerboa	MODERN SPECIES	143	Ldlr (ENSJJAG00000016661) #7	Smarca4 (ENSJJAG00000012877) #8	Timm29 (ENSJJAG00000010999) #9	Yipf2 (ENSJJAG00000010227) #10	Carm1 (ENSJJAG00000008047) #11	AB124611 (ENSJJAG00000002332) #12	Tmed1 (ENSJJAG00000018485) #13	Dnm2 (ENSJJAG00000015316) #14	Qtrt1 (ENSJJAG00000013307) #15	ENSJJAG00000013051 #16	Slc44a2 (ENSJJAG00000011453) #17	Ap1m2 (ENSJJAG00000009862) #18	Cdkn2d (ENSJJAG00000008566) #19	Kri1 (ENSJJAG00000002972) #20	Atg4d (ENSJJAG00000000341) #21	S1pr5 (ENSJJAG00000013383) #22	Keap1 (ENSJJAG00000000119) #23	Pde4a (ENSJJAG00000022269) #24	Cdc37 (ENSJJAG00000021223) #25	Tyk2 (ENSJJAG00000020250) #26	Raver1 (ENSJJAG00000018219) #27	Fdx2 (ENSJJAG00000017700) #28	Zglp1 (ENSJJAG00000017375) #29	Icam5 (ENSJJAG00000016403) #30	Icam4 (ENSJJAG00000016127) #31	Icam1 (ENSJJAG00000014180) #32	Mrpl4 (ENSJJAG00000010573) #33	ENSJJAG00000013403	S1pr2 (ENSJJAG00000013342) #34	ENSJJAG00000009832	Dnmt1 (ENSJJAG00000021067) #35
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00900000143551	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00940000172524	ENSGT00390000005100 #35
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00900000143551	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00940000172524	ENSGT00390000005100 #35
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000160550 #27	ENSGT00940000161143 #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36	ENSGT00530000064158 #37
Long-tailed chinchilla	MODERN SPECIES	202	LDLR (ENSCLAG00000015453) #7	SMARCA4 (ENSCLAG00000011946) #8	TIMM29 (ENSCLAG00000014951) #9	YIPF2 (ENSCLAG00000011701) #10	CARM1 (ENSCLAG00000011012) #11	C19orf38 (ENSCLAG00000009782) #12	TMED1 (ENSCLAG00000008870) #13	DNM2 (ENSCLAG00000008156) #14	QTRT1 (ENSCLAG00000009859) #15	ILF3 (ENSCLAG00000011537) #16	SLC44A2 (ENSCLAG00000017339) #17	AP1M2 (ENSCLAG00000015388) #18	CDKN2D (ENSCLAG00000016365) #19	KRI1 (ENSCLAG00000006582) #20	ATG4D (ENSCLAG00000004668) #21	S1PR5 (ENSCLAG00000011673) #22	KEAP1 (ENSCLAG00000011003) #23	PDE4A (ENSCLAG00000005445) #24	CDC37 (ENSCLAG00000004550) #25	TYK2 (ENSCLAG00000013417) #26	RAVER1 (ENSCLAG00000009336) #27	FDX2 (ENSCLAG00000007657) #28	ZGLP1 (ENSCLAG00000006578) #29	ICAM5 (ENSCLAG00000004832) #30	ICAM4 (ENSCLAG00000006269) #31	ICAM1 (ENSCLAG00000005350) #32	MRPL4 (ENSCLAG00000004552) #33	S1PR2 (ENSCLAG00000017915) #34	DNMT1 (ENSCLAG00000009575) #35	EIF3G (ENSCLAG00000007381) #36	PPAN (ENSCLAG00000009362) #37
Degu	MODERN SPECIES	91	LDLR (ENSODEG00000015446) #7	SMARCA4 (ENSODEG00000017127) #8	TIMM29 (ENSODEG00000015866) #9	YIPF2 (ENSODEG00000015957) #10	CARM1 (ENSODEG00000015950) #11	C19orf38 (ENSODEG00000015704) #12	TMED1 (ENSODEG00000016351) #13	DNM2 (ENSODEG00000016299) #14	QTRT1 (ENSODEG00000015894) #15	ILF3 (ENSODEG00000015951) #16	SLC44A2 (ENSODEG00000016516) #17	AP1M2 (ENSODEG00000016673) #18	CDKN2D (ENSODEG00000016627) #19	KRI1 (ENSODEG00000016083) #20	ATG4D (ENSODEG00000016344) #21	S1PR5 (ENSODEG00000020555) #22	KEAP1 (ENSODEG00000016128) #23	PDE4A (ENSODEG00000016246) #24	CDC37 (ENSODEG00000016453) #25	TYK2 (ENSODEG00000016347) #26	RAVER1 (ENSODEG00000016260) #27	FDX2 (ENSODEG00000016614) #28	ENSODEG00000016522 #29	ICAM5 (ENSODEG00000016352) #30	ICAM4 (ENSODEG00000016513) #31	ICAM1 (ENSODEG00000016545) #32	MRPL4 (ENSODEG00000016194) #33	S1PR2 (ENSODEG00000020460) #34	DNMT1 (ENSODEG00000016929) #35	ENSODEG00000016542 #36	PPAN (ENSODEG00000016743) #37
Naked mole-rat female	MODERN SPECIES	21	TIMM29 (ENSHGLG00000031869) #9	YIPF2 (ENSHGLG00000005585) #10	CARM1 (ENSHGLG00000007754) #11	C19orf38 (ENSHGLG00000048163) #12	TMED1 (ENSHGLG00000034031) #13	DNM2 (ENSHGLG00000014318) #14	QTRT1 (ENSHGLG00000018553) #15	ENSHGLG00000019494 #16	ENSHGLG00000036847	SLC44A2 (ENSHGLG00000011332) #17	ENSHGLG00000044071	AP1M2 (ENSHGLG00000017835) #18	CDKN2D (ENSHGLG00000013311) #19	KRI1 (ENSHGLG00000015240) #20	ATG4D (ENSHGLG00000007086) #21	S1PR5 (ENSHGLG00000045386) #22	KEAP1 (ENSHGLG00000015222) #23	PDE4A (ENSHGLG00000015878) #24	CDC37 (ENSHGLG00000050693) #25	TYK2 (ENSHGLG00000015161) #26	ICAM3 (ENSHGLG00000040279)	RAVER1 (ENSHGLG00000015460) #27	FDX2 (ENSHGLG00000018345) #28	ZGLP1 (ENSHGLG00000043835) #29	ICAM5 (ENSHGLG00000015929) #30	ICAM4 (ENSHGLG00000042569) #31	ICAM1 (ENSHGLG00000010281) #32	S1PR2 (ENSHGLG00000041926) #34	MRPL4 (ENSHGLG00000007839) #33	ENSHGLG00000037635	DNMT1 (ENSHGLG00000018262) #35
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00900000143551	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143.b #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36
Eurasian red squirrel	MODERN SPECIES	7	SPC24 (ENSSVLG00005024002)	LDLR (ENSSVLG00005023861) #7	YIPF2 (ENSSVLG00005022404) #10	CARM1 (ENSSVLG00005022155) #11	C19orf38 (ENSSVLG00005022088) #12	TMED1 (ENSSVLG00005022048) #13	DNM2 (ENSSVLG00005021854) #14	QTRT1 (ENSSVLG00005021743) #15	ILF3 (ENSSVLG00005021649) #16	ENSSVLG00005021542	SLC44A2 (ENSSVLG00005021433) #17	ENSSVLG00005021219 #18	CDKN2D (ENSSVLG00005021167) #19	KRI1 (ENSSVLG00005020995) #20	ATG4D (ENSSVLG00005020947) #21	S1PR5 (ENSSVLG00005020921) #22	KEAP1 (ENSSVLG00005020889) #23	PDE4A (ENSSVLG00005020638) #24	CDC37 (ENSSVLG00005020567) #25	TYK2 (ENSSVLG00005020519) #26	ICAM3 (ENSSVLG00005020483)	RAVER1 (ENSSVLG00005020415) #27	FDX2 (ENSSVLG00005020343) #28	ZGLP1 (ENSSVLG00005020288) #29	ICAM5 (ENSSVLG00005020255) #30	ICAM4 (ENSSVLG00005020213) #31	ICAM1 (ENSSVLG00005020131) #32	MRPL4 (ENSSVLG00005020006) #33	S1PR2 (ENSSVLG00005019959) #34	DNMT1 (ENSSVLG00005019922) #35	EIF3G (ENSSVLG00005019867) #36
Marmotini	ANCESTRAL SPECIES	41	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143.b #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36
Alpin marmot	MODERN SPECIES	24	LDLR (ENSMMMG00000019891) #7	SMARCA4 (ENSMMMG00000019826) #8	ENSMMMG00000019820 #9	YIPF2 (ENSMMMG00000019805) #10	CARM1 (ENSMMMG00000019799) #11	C19orf38 (ENSMMMG00000019779) #12	TMED1 (ENSMMMG00000019775) #13	DNM2 (ENSMMMG00000019573) #14	QTRT1 (ENSMMMG00000019561) #15	ILF3 (ENSMMMG00000019155) #16	SLC44A2 (ENSMMMG00000019127) #17	AP1M2 (ENSMMMG00000019106) #18	ENSMMMG00000019102	KRI1 (ENSMMMG00000019036) #20	ATG4D (ENSMMMG00000018985) #21	ENSMMMG00000018981 #22	KEAP1 (ENSMMMG00000018969) #23	PDE4A (ENSMMMG00000017967) #24	CDC37 (ENSMMMG00000017941) #25	TYK2 (ENSMMMG00000017895) #26	ICAM3 (ENSMMMG00000017891)	RAVER1 (ENSMMMG00000017883) #27	FDX2 (ENSMMMG00000017878) #28	ENSMMMG00000017874 #29	ICAM5 (ENSMMMG00000017859) #30	ICAM4 (ENSMMMG00000017853) #31	ICAM1 (ENSMMMG00000017017) #32	MRPL4 (ENSMMMG00000017010) #33	S1PR2 (ENSMMMG00000017008) #34	DNMT1 (ENSMMMG00000015887) #35	ENSMMMG00000015867 #36
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00940000161046 #7	ENSGT00940000156887 #8	ENSGT00390000018541 #9	ENSGT00390000010157.b #10	ENSGT00940000160377 #11	ENSGT00390000008862 #12	ENSGT00940000158445 #13	ENSGT00940000155764.C #14	ENSGT00530000063679.B #15	ENSGT00940000156719 #16	ENSGT00940000158178 #17	ENSGT00940000159089 #18	ENSGT00940000159801.B #19	ENSGT00390000005605 #20	ENSGT00530000063000.a.a.b #21	ENSGT01050000244887.A.a.a.a #22	ENSGT00940000159543 #23	ENSGT00940000159788.b #24	ENSGT00390000013443.c #25	ENSGT00940000159869 #26	ENSGT00940000159005	ENSGT00940000160550 #27	ENSGT00940000161143.b #28	ENSGT00470000042444 #29	ENSGT00940000162184 #30	ENSGT00940000162431 #31	ENSGT00940000162311 #32	ENSGT00390000014512 #33	ENSGT01050000244887.A.a.a.b #34	ENSGT00390000005100 #35	ENSGT00510000047802 #36
Arctic ground squirrel	MODERN SPECIES	217	LDLR (ENSUPAG00010003299) #7	SMARCA4 (ENSUPAG00010003222) #8	TIMM29 (ENSUPAG00010003216) #9	YIPF2 (ENSUPAG00010003190) #10	CARM1 (ENSUPAG00010003160) #11	C19orf38 (ENSUPAG00010003139) #12	TMED1 (ENSUPAG00010003125) #13	DNM2 (ENSUPAG00010002497) #14	QTRT1 (ENSUPAG00010002480) #15	ILF3 (ENSUPAG00010002202) #16	SLC44A2 (ENSUPAG00010002115) #17	AP1M2 (ENSUPAG00010002081) #18	CDKN2D (ENSUPAG00010002067) #19	KRI1 (ENSUPAG00010002031) #20	ATG4D (ENSUPAG00010002014) #21	ENSUPAG00010002004 #22	KEAP1 (ENSUPAG00010001991) #23	PDE4A (ENSUPAG00010001873) #24	CDC37 (ENSUPAG00010001857) #25	TYK2 (ENSUPAG00010001822) #26	ICAM3 (ENSUPAG00010001065)	RAVER1 (ENSUPAG00010001012) #27	FDX2 (ENSUPAG00010001004) #28	ZGLP1 (ENSUPAG00010000992) #29	ICAM5 (ENSUPAG00010000960) #30	ICAM4 (ENSUPAG00010000954) #31	ICAM1 (ENSUPAG00010000950) #32	MRPL4 (ENSUPAG00010000934) #33	S1PR2 (ENSUPAG00010000933) #34	DNMT1 (ENSUPAG00010000182) #35	EIF3G (ENSUPAG00010000146) #36
Squirrel	MODERN SPECIES	259	LDLR (ENSSTOG00000007999) #7	SMARCA4 (ENSSTOG00000007939) #8	TIMM29 (ENSSTOG00000026705) #9	YIPF2 (ENSSTOG00000007905) #10	CARM1 (ENSSTOG00000007864) #11	C19orf38 (ENSSTOG00000024893) #12	TMED1 (ENSSTOG00000023250) #13	DNM2 (ENSSTOG00000007826) #14	QTRT1 (ENSSTOG00000020466) #15	ILF3 (ENSSTOG00000007786) #16	SLC44A2 (ENSSTOG00000007737) #17	AP1M2 (ENSSTOG00000007719) #18	ENSSTOG00000023338 #19	KRI1 (ENSSTOG00000007660) #20	ATG4D (ENSSTOG00000023750) #21	S1PR5 (ENSSTOG00000024850) #22	KEAP1 (ENSSTOG00000010114) #23	PDE4A (ENSSTOG00000027947) #24	CDC37 (ENSSTOG00000015962) #25	TYK2 (ENSSTOG00000003264) #26	RAVER1 (ENSSTOG00000003241) #27	FDX2 (ENSSTOG00000008207) #28	ZGLP1 (ENSSTOG00000021194) #29	ICAM5 (ENSSTOG00000008181) #30	ICAM4 (ENSSTOG00000019729) #31	ICAM1 (ENSSTOG00000031629) #32	MRPL4 (ENSSTOG00000030121) #33	S1PR2 (ENSSTOG00000022687) #34	DNMT1 (ENSSTOG00000010841) #35	EIF3G (ENSSTOG00000027655) #36	P2RY11 (ENSSTOG00000010839)