Chordata	ANCESTRAL SPECIES	121																ENSGT00990000203615.b.a.a #22	ENSGT01060000248594
Vertebrata	DUPLICATION
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.b #22
Gnathostomata	ANCESTRAL SPECIES	337											ENSGT00940000154465.A ##14	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26
Euteleostomi	ANCESTRAL SPECIES	37	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000164201	ENSGT00940000155686 #37	ENSGT00940000155207.a.b
Sarcopterygii	ANCESTRAL SPECIES	67		ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000164201	ENSGT00940000155686 #37
Tetrapoda	ANCESTRAL SPECIES	28	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37	ENSGT00940000155207.a.b
Amniota	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37
Mammalia	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.D ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Theria	ANCESTRAL SPECIES	1	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.D ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000011549	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000011549	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Primates	ANCESTRAL SPECIES	1	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a ##27	ENSGT00390000011549	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a ##27	ENSGT00390000011549	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000166607	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a.e.a.a.a ##27	ENSGT00390000011549	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.a.e.a.a.a ##27	ENSGT00390000011549	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b.e ##16	ENSGT00910000148153 #15	ENSGT00950000183064.b.f #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.a.e.a.a.a ##27	ENSGT00390000011549	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Hominidae	ANCESTRAL SPECIES	25	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b.e ##16	ENSGT00910000148153 #15	ENSGT00950000183064.b.f #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00530000064050.ab #8	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b.e ##16	ENSGT00910000148153 #15	ENSGT00950000183064.b.f #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00530000064050.ab #8	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b.e ##16	ENSGT00910000148153 #15	ENSGT00950000183064.b.f #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Pan	ANCESTRAL SPECIES	27	ENSGT00580000082495.a.a #7	ENSGT00530000064050.ab #8	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00910000148153 #15	ENSGT00950000183064.b.f #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Bonobo	MODERN SPECIES	12	ENSPPAG00000030435 #7	ENSPPAG00000031314 #8	ENSPPAG00000032977 #9	HLCS (ENSPPAG00000033846) #10	ENSPPAG00000034271 #11	RIPPLY3 (ENSPPAG00000034300) #12	PIGP (ENSPPAG00000034406) #13	TTC3 (ENSPPAG00000006846) #14	ENSPPAG00000032499 #15	ENSPPAG00000029622 #16	DYRK1A (ENSPPAG00000032422) #17	KCNJ6 (ENSPPAG00000032498) #18	ENSPPAG00000036930 #19	ENSPPAG00000037211 #20	ENSPPAG00000033288 #21	KCNJ15 (ENSPPAG00000032085) #22	ERG (ENSPPAG00000030567) #23	ETS2 (ENSPPAG00000027688) #24	PSMG1 (ENSPPAG00000028596) #25	BRWD1 (ENSPPAG00000029543) #26	ENSPPAG00000032181 #27	GET1 (ENSPPAG00000034665) #28	LCA5L (ENSPPAG00000036290) #29	ENSPPAG00000037065 #30	B3GALT5 (ENSPPAG00000039797) #31	PCP4 (ENSPPAG00000041210) #32	DSCAM (ENSPPAG00000017108) #33	BACE2 (ENSPPAG00000028296) #34	FAM3B (ENSPPAG00000030408) #35	MX2 (ENSPPAG00000032451) #36	MX1 (ENSPPAG00000034486) #37
Chimpanzee	MODERN SPECIES	12	CLDN14 (ENSPTRG00000013892)	ENSPTRG00000052426 #7	ENSPTRG00000048635 #8	SIM2 (ENSPTRG00000013894) #9	HLCS (ENSPTRG00000013895) #10	RIPPLY3 (ENSPTRG00000013896) #12	PIGP (ENSPTRG00000013897) #13	TTC3 (ENSPTRG00000013898) #14	ENSPTRG00000048727 #15	VPS26C (ENSPTRG00000013900) #16	DYRK1A (ENSPTRG00000013901) #17	KCNJ6 (ENSPTRG00000004469) #18	ENSPTRG00000013903 #19	ENSPTRG00000013904 #20	ENSPTRG00000052552 #21	KCNJ15 (ENSPTRG00000043267) #22	ERG (ENSPTRG00000013907) #23	ETS2 (ENSPTRG00000013908) #24	PSMG1 (ENSPTRG00000013911) #25	BRWD1 (ENSPTRG00000013912) #26	ENSPTRG00000031426 #27	GET1 (ENSPTRG00000013915) #28	LCA5L (ENSPTRG00000013916) #29	SH3BGR (ENSPTRG00000013917) #30	B3GALT5 (ENSPTRG00000052056) #31	IGSF5 (ENSPTRG00000013920)	PCP4 (ENSPTRG00000013921) #32	DSCAM (ENSPTRG00000013922) #33	BACE2 (ENSPTRG00000013924) #34	FAM3B (ENSPTRG00000013925) #35	MX1 (ENSPTRG00000013927) #36
Human	MODERN SPECIES	13	SETD4 (ENSG00000185917)	CBR1 (ENSG00000159228)	CBR3 (ENSG00000159231)	DOP1B (ENSG00000142197)	MORC3 (ENSG00000159256)	CHAF1B (ENSG00000159259)	CLDN14 (ENSG00000159261)	SIM2 (ENSG00000159263) #9	HLCS (ENSG00000159267) #10	RIPPLY3 (ENSG00000183145) #12	PIGP (ENSG00000185808) #13	TTC3 (ENSG00000182670) #14	VPS26C (ENSG00000157538) ##16	DYRK1A (ENSG00000157540) #17	KCNJ6 (ENSG00000157542) #18	KCNJ15 (ENSG00000157551) #22	ERG (ENSG00000157554) #23	ETS2 (ENSG00000157557) #24	PSMG1 (ENSG00000183527) #25	BRWD1 (ENSG00000185658) #26	HMGN1 (ENSG00000205581) ##27	GET1 (ENSG00000182093) #28	GET1-SH3BGR (ENSG00000285815)	LCA5L (ENSG00000157578) #29	SH3BGR (ENSG00000185437) #30	B3GALT5 (ENSG00000183778) #31	IGSF5 (ENSG00000183067)	PCP4 (ENSG00000183036) #32	DSCAM (ENSG00000171587) #33	BACE2 (ENSG00000182240) #34	FAM3B (ENSG00000183844) #35
Gorilla	MODERN SPECIES	12	CHAF1B (ENSGGOG00000015726)	CLDN14 (ENSGGOG00000014893)	ENSGGOG00000038854 #8	ENSGGOG00000025047 #7	SIM2 (ENSGGOG00000014943) #9	HLCS (ENSGGOG00000011135) #10	RIPPLY3 (ENSGGOG00000038116) #12	PIGP (ENSGGOG00000010275) #13	TTC3 (ENSGGOG00000011116) #14	ENSGGOG00000001581 #16	ENSGGOG00000011897 #17	KCNJ6 (ENSGGOG00000003812) #18	ENSGGOG00000023530 #19	ENSGGOG00000024462 #20	ENSGGOG00000036523 #21	KCNJ15 (ENSGGOG00000038780) #22	ERG (ENSGGOG00000011391) #23	ETS2 (ENSGGOG00000015464) #24	PSMG1 (ENSGGOG00000005681) #25	BRWD1 (ENSGGOG00000002545) #26	ENSGGOG00000013672 #27	GET1 (ENSGGOG00000013144) #28	LCA5L (ENSGGOG00000013149) #29	ENSGGOG00000005007 #30	B3GALT5 (ENSGGOG00000004209) #31	IGSF5 (ENSGGOG00000000146)	PCP4 (ENSGGOG00000008772) #32	DSCAM (ENSGGOG00000014691) #33	BACE2 (ENSGGOG00000023241) #34	FAM3B (ENSGGOG00000015137) #35	MX2 (ENSGGOG00000001554) #36
Orangutan	MODERN SPECIES	12	CBR1 (ENSPPYG00000011399)	CBR3 (ENSPPYG00000011400)	DOP1B (ENSPPYG00000011401)	MORC3 (ENSPPYG00000011402)	CHAF1B (ENSPPYG00000011403)	CLDN14 (ENSPPYG00000011404)	SIM2 (ENSPPYG00000011405) #9	HLCS (ENSPPYG00000011406) #10	RIPPLY3 (ENSPPYG00000040629) #12	PIGP (ENSPPYG00000011409) #13	TTC3 (ENSPPYG00000011410) #14	VPS26C (ENSPPYG00000040834) ##16	DYRK1A (ENSPPYG00000011412) #17	KCNJ6 (ENSPPYG00000011556) #18	ENSPPYG00000011415 #20	KCNJ15 (ENSPPYG00000031631) #22	ERG (ENSPPYG00000011419) #23	ETS2 (ENSPPYG00000011421) #24	PSMG1 (ENSPPYG00000011423) #25	BRWD1 (ENSPPYG00000011424) #26	ENSPPYG00000011426	GET1 (ENSPPYG00000011427) #28	LCA5L (ENSPPYG00000032149) #29	ENSPPYG00000011428 #30	B3GALT5 (ENSPPYG00000011429) #31	IGSF5 (ENSPPYG00000011430)	DSCAM (ENSPPYG00000011432) #33	BACE2 (ENSPPYG00000011433) #34	FAM3B (ENSPPYG00000011435) #35	MX2 (ENSPPYG00000011436) #36	MX1 (ENSPPYG00000011437) #37
Gibbon	MODERN SPECIES	17	CHAF1B (ENSNLEG00000004429)	CLDN14 (ENSNLEG00000004475)	ENSNLEG00000034915 #8	ENSNLEG00000004481 #9	HLCS (ENSNLEG00000004489) #10	ENSNLEG00000031839 #11	ENSNLEG00000004521 #12	PIGP (ENSNLEG00000004523) #13	TTC3 (ENSNLEG00000004545) #14	ENSNLEG00000032242 #15	ENSNLEG00000004717 #16	DYRK1A (ENSNLEG00000004733) #17	KCNJ6 (ENSNLEG00000004741) #18	ENSNLEG00000030342 #19	ENSNLEG00000031686 #20	KCNJ15 (ENSNLEG00000033586) #22	ERG (ENSNLEG00000004758) #23	ETS2 (ENSNLEG00000004804) #24	PSMG1 (ENSNLEG00000028150) #25	BRWD1 (ENSNLEG00000013134) #26	ENSNLEG00000028365 #27	GET1 (ENSNLEG00000033928) #28	LCA5L (ENSNLEG00000013153) #29	ENSNLEG00000013169 #30	B3GALT5 (ENSNLEG00000013171) #31	IGSF5 (ENSNLEG00000013181)	PCP4 (ENSNLEG00000013201) #32	ENSNLEG00000032106	DSCAM (ENSNLEG00000028860) #33	ENSNLEG00000008585 #34	FAM3B (ENSNLEG00000008601) #35
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00940000160495	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00940000160495	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Vervet Monkey	MODERN SPECIES	11	SETD4 (ENSCSAG00000008698)	CBR1 (ENSCSAG00000008686)	CBR3 (ENSCSAG00000008678)	DOP1B (ENSCSAG00000008670)	MORC3 (ENSCSAG00000008649)	CHAF1B (ENSCSAG00000008631)	CLDN14 (ENSCSAG00000018711)	SIM2 (ENSCSAG00000008567) #9	HLCS (ENSCSAG00000008541) #10	PIGP (ENSCSAG00000008532) #13	ENSCSAG00000008520	VPS26C (ENSCSAG00000008515) #16	DYRK1A (ENSCSAG00000008483) #17	ENSCSAG00000018712	KCNJ6 (ENSCSAG00000008472) #18	KCNJ15 (ENSCSAG00000018713) #22	ERG (ENSCSAG00000008463) #23	ETS2 (ENSCSAG00000008454) #24	PSMG1 (ENSCSAG00000008450) #25	BRWD1 (ENSCSAG00000008437) #26	HMGN1 (ENSCSAG00000008397) ##27	GET1 (ENSCSAG00000008355) #28	LCA5L (ENSCSAG00000008329) #29	SH3BGR (ENSCSAG00000008320) #30	B3GALT5 (ENSCSAG00000018714) #31	IGSF5 (ENSCSAG00000008315)	PCP4 (ENSCSAG00000008304) #32	DSCAM (ENSCSAG00000008297) #33	ENSCSAG00000008272 #33	ENSCSAG00000000280	BACE2 (ENSCSAG00000008267) #34
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00910000147749	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Macaca	ANCESTRAL SPECIES	3	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00910000147749	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.b.a.a.a.a.c.a.a	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00940000163505.a.a.b.b.b.a.b.b.c	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00950000182802.A.a.a.e.a.a.a ##27	ENSGT00390000011549	ENSGT00940000159847 #30	ENSGT00560000077266.b #29	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Crab-eating macaque	MODERN SPECIES	13	CBR1 (ENSMFAG00000045053)	DOP1B (ENSMFAG00000002007)	MORC3 (ENSMFAG00000042335)	CHAF1B (ENSMFAG00000040980)	CLDN14 (ENSMFAG00000029830)	SIM2 (ENSMFAG00000002855) #9	HLCS (ENSMFAG00000031411) #10	ENSMFAG00000053400	ENSMFAG00000040294 #13	TTC3 (ENSMFAG00000045889) #14	VPS26C (ENSMFAG00000041827) #16	DYRK1A (ENSMFAG00000035589) #17	KCNJ6 (ENSMFAG00000040836) #18	ENSMFAG00000060619	ENSMFAG00000061529	KCNJ15 (ENSMFAG00000018546) #22	ERG (ENSMFAG00000031991) #23	ETS2 (ENSMFAG00000055774) #24	ENSMFAG00000055049	BRWD1 (ENSMFAG00000039942) #26	ENSMFAG00000056788	ENSMFAG00000002474 #27	LCA5L (ENSMFAG00000008201) #29	ENSMFAG00000031582 #30	B3GALT5 (ENSMFAG00000000800) #31	IGSF5 (ENSMFAG00000033889)	ENSMFAG00000052126	PCP4 (ENSMFAG00000002748) #32	ENSMFAG00000060227	DSCAM (ENSMFAG00000033365) #33	BACE2 (ENSMFAG00000032329) #34
Rhesus	MODERN SPECIES	13	SETD4 (ENSMMUG00000001125)	CBR1 (ENSMMUG00000020565)	DOP1B (ENSMMUG00000010336)	MORC3 (ENSMMUG00000020043)	CHAF1B (ENSMMUG00000007399)	CLDN14 (ENSMMUG00000000488)	SIM2 (ENSMMUG00000058333) #9	HLCS (ENSMMUG00000015566) #10	RIPPLY3 (ENSMMUG00000043090) #12	ENSMMUG00000058732	PIGP (ENSMMUG00000016211) #13	TTC3 (ENSMMUG00000017505) #14	VPS26C (ENSMMUG00000006962) #16	DYRK1A (ENSMMUG00000018131) #17	KCNJ6 (ENSMMUG00000018136) #18	KCNJ15 (ENSMMUG00000056855) #22	ERG (ENSMMUG00000010296) #23	ETS2 (ENSMMUG00000009063) #24	ENSMMUG00000063670	PSMG1 (ENSMMUG00000008498) #25	BRWD1 (ENSMMUG00000008504) #26	ENSMMUG00000006075 ##27	ENSMMUG00000052792	LCA5L (ENSMMUG00000010407) #29	GET1 (ENSMMUG00000020654) #30	B3GALT5 (ENSMMUG00000003428) #31	IGSF5 (ENSMMUG00000003427)	PCP4 (ENSMMUG00000041181) #32	DSCAM (ENSMMUG00000005174) #33	BACE2 (ENSMMUG00000004257) #34	MX2 (ENSMMUG00000044257) #36
Pig-tailed macaque	MODERN SPECIES	503	CLDN14 (ENSMNEG00000029635)	SIM2 (ENSMNEG00000041947) #9	ENSMNEG00000030036 #11	HLCS (ENSMNEG00000034742) #10	ENSMNEG00000000027	RIPPLY3 (ENSMNEG00000039675) #12	PIGP (ENSMNEG00000029111) #13	TTC3 (ENSMNEG00000017406) #14	ENSMNEG00000028032	VPS26C (ENSMNEG00000019931) #16	DYRK1A (ENSMNEG00000027229) #17	KCNJ6 (ENSMNEG00000036804) #18	ENSMNEG00000010394 #19	ENSMNEG00000033234 #20	ENSMNEG00000043068 #21	KCNJ15 (ENSMNEG00000012650) #22	ERG (ENSMNEG00000028447) #23	ETS2 (ENSMNEG00000029078) #24	PSMG1 (ENSMNEG00000028968) #25	BRWD1 (ENSMNEG00000037268) #26	ENSMNEG00000043143 #27	GET1 (ENSMNEG00000036276) #28	LCA5L (ENSMNEG00000034779) #29	SH3BGR (ENSMNEG00000044767) #30	B3GALT5 (ENSMNEG00000028563) #31	IGSF5 (ENSMNEG00000036150)	PCP4 (ENSMNEG00000043382) #32	DSCAM (ENSMNEG00000045567) #33	BACE2 (ENSMNEG00000039867) #34	FAM3B (ENSMNEG00000036712) #35	MX2 (ENSMNEG00000038461) #36
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00550000074968.a	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00910000147159 #11	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00910000147749	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Olive baboon	MODERN SPECIES	14	MORC3 (ENSPANG00000009396)	CHAF1B (ENSPANG00000015137)	CLDN14 (ENSPANG00000010824)	ENSPANG00000042290	SIM2 (ENSPANG00000020491) #9	HLCS (ENSPANG00000011262) #10	ENSPANG00000038151	ENSPANG00000044488	RIPPLY3 (ENSPANG00000033880) #12	PIGP (ENSPANG00000019363) #13	TTC3 (ENSPANG00000024566) #14	VPS26C (ENSPANG00000005248) #16	DYRK1A (ENSPANG00000009693) #17	KCNJ6 (ENSPANG00000009021) #18	ENSPANG00000034777 #19	KCNJ15 (ENSPANG00000021162) #22	ERG (ENSPANG00000019227) #23	ENSPANG00000044873	ETS2 (ENSPANG00000024567) #24	BB_R133_JSM474C8F (ENSPANG00000044329)	PSMG1 (ENSPANG00000021503) #25	BRWD1 (ENSPANG00000015950) #26	ENSPANG00000041932	HMGN1 (ENSPANG00000030801) #27	GET1 (ENSPANG00000017092) #30	LCA5L (ENSPANG00000019228) #29	ENSPANG00000035786	B3GALT5 (ENSPANG00000000557) #31	IGSF5 (ENSPANG00000033531)	PCP4 (ENSPANG00000044834) #32	DSCAM (ENSPANG00000006261) #33
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00910000147159 #11	ENSGT00940000160734	ENSGT00730000111599	ENSGT00910000147197	ENSGT00390000015823	ENSGT00730000111429 #12	ENSGT00390000013771.u #13	ENSGT00940000154465.C.o #14	ENSGT00910000147749	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Drill	MODERN SPECIES	887												KCNJ6 (ENSMLEG00000005853) #18	ENSMLEG00000041245 #19	ENSMLEG00000011472 #20	ENSMLEG00000020165 #21	KCNJ15 (ENSMLEG00000027520) #22	ERG (ENSMLEG00000033749) #23	ETS2 (ENSMLEG00000024380) #24	PSMG1 (ENSMLEG00000043473) #25	BRWD1 (ENSMLEG00000043257) #26	ENSMLEG00000031999 #27	GET1 (ENSMLEG00000038301) #28	LCA5L (ENSMLEG00000020734) #29	SH3BGR (ENSMLEG00000031375) #30	B3GALT5 (ENSMLEG00000030055) #31	IGSF5 (ENSMLEG00000006808)	PCP4 (ENSMLEG00000031531) #32	DSCAM (ENSMLEG00000028425) #33	BACE2 (ENSMLEG00000044038) #34	FAM3B (ENSMLEG00000033110) #35	MX2 (ENSMLEG00000037071) #36
Sooty mangabey	MODERN SPECIES	465	CHAF1B (ENSCATG00000044079)	CLDN14 (ENSCATG00000015596)	SIM2 (ENSCATG00000031206) #9	HLCS (ENSCATG00000043493) #10	ENSCATG00000034753 #11	ENSCATG00000040437	RIPPLY3 (ENSCATG00000045245) #12	PIGP (ENSCATG00000038403) #13	TTC3 (ENSCATG00000041926) #14	VPS26C (ENSCATG00000019393) #16	DYRK1A (ENSCATG00000044358) #17	KCNJ6 (ENSCATG00000037213) #18	ENSCATG00000044805 #19	ENSCATG00000044826 #20	ENSCATG00000019078 #21	KCNJ15 (ENSCATG00000021817) #22	ERG (ENSCATG00000045169) #23	ETS2 (ENSCATG00000032809) #24	PSMG1 (ENSCATG00000042084) #25	BRWD1 (ENSCATG00000007352) #26	ENSCATG00000043642 #27	GET1 (ENSCATG00000041953) #28	LCA5L (ENSCATG00000012924) #29	SH3BGR (ENSCATG00000040538) #30	B3GALT5 (ENSCATG00000039495) #31	IGSF5 (ENSCATG00000041067)	PCP4 (ENSCATG00000043532) #32	DSCAM (ENSCATG00000016259) #33	BACE2 (ENSCATG00000042433) #34	ENSCATG00000032305	FAM3B (ENSCATG00000039352) #35
Rhinopithecus	ANCESTRAL SPECIES	353													ENSGT00390000011636 #19	ENSGT00390000000582 #20	ENSGT00910000147022 #21	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a.ub #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32
Black snub-nosed monkey	MODERN SPECIES	658												DYNLRB2 (ENSRBIG00000028645)	ENSRBIG00000042276 #19	ENSRBIG00000040958 #20	ENSRBIG00000033348 #21	KCNJ15 (ENSRBIG00000024702) #22	ERG (ENSRBIG00000042898) #23	ETS2 (ENSRBIG00000033816) #24	PSMG1 (ENSRBIG00000038977) #25	BRWD1 (ENSRBIG00000028196) #26	ENSRBIG00000031903 ##27	GET1 (ENSRBIG00000030445) #28	LCA5L (ENSRBIG00000036213) #29	SH3BGR (ENSRBIG00000035022) #30	B3GALT5 (ENSRBIG00000017353) #31	IGSF5 (ENSRBIG00000036727)	PCP4 (ENSRBIG00000027088) #32
Golden snub-nosed monkey	MODERN SPECIES	1413													ENSRROG00000027534 #19	ENSRROG00000031314 #20	ENSRROG00000041277 #21	KCNJ15 (ENSRROG00000005056) #22	ERG (ENSRROG00000036615) #23	ETS2 (ENSRROG00000039824) #24	PSMG1 (ENSRROG00000037672) #25	BRWD1 (ENSRROG00000030474) #26	ENSRROG00000030755 #27	GET1 (ENSRROG00000038743) #28	LCA5L (ENSRROG00000043686) #29	SH3BGR (ENSRROG00000037605) #30	B3GALT5 (ENSRROG00000029179) #31	IGSF5 (ENSRROG00000044392)	PCP4 (ENSRROG00000041931) #32
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00910000147159 #11	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.g.a #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00940000169148	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Cebidae	ANCESTRAL SPECIES	32	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.g.a #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00940000169148	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Marmoset	MODERN SPECIES	13	SETD4 (ENSCJAG00000002805)	CBR1 (ENSCJAG00000038083)	ENSCJAG00000072558	CBR3 (ENSCJAG00000081554)	DOP1B (ENSCJAG00000002725)	MORC3 (ENSCJAG00000002781)	CHAF1B (ENSCJAG00000002772)	CLDN14 (ENSCJAG00000002769)	SIM2 (ENSCJAG00000002704) #9	HLCS (ENSCJAG00000002697) #10	PIGP (ENSCJAG00000002683) #13	TTC3 (ENSCJAG00000002640) #14	VPS26C (ENSCJAG00000002626) #16	DYRK1A (ENSCJAG00000002609) #17	KCNJ6 (ENSCJAG00000002599) #18	KCNJ15 (ENSCJAG00000039990) #22	ERG (ENSCJAG00000008119) #23	ETS2 (ENSCJAG00000008102) #24	PSMG1 (ENSCJAG00000015016) #25	BRWD1 (ENSCJAG00000015042) #26	ENSCJAG00000045192 ##27	ENSCJAG00000038251	LCA5L (ENSCJAG00000005693) #29	ENSCJAG00000005687 #30	ENSCJAG00000085074	ENSCJAG00000070994	B3GALT5 (ENSCJAG00000005667) #31	ENSCJAG00000083298	PCP4 (ENSCJAG00000086635) #32	DSCAM (ENSCJAG00000005540) #33	ENSCJAG00000083017
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.g.a #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00390000011636 #19	ENSGT00940000169148	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36	ENSGT00940000155686 #37
Bolivian squirrel monkey	MODERN SPECIES	66	CBR1 (ENSSBOG00000025124)	CBR3 (ENSSBOG00000021978)	DOP1B (ENSSBOG00000034256)	ENSSBOG00000031211	CHAF1B (ENSSBOG00000032911)	CLDN14 (ENSSBOG00000018972)	SIM2 (ENSSBOG00000034637) #9	HLCS (ENSSBOG00000030015) #10	PIGP (ENSSBOG00000029088) #13	TTC3 (ENSSBOG00000023926) #14	ENSSBOG00000004124 #16	DYRK1A (ENSSBOG00000031681) #17	KCNJ6 (ENSSBOG00000027870) #18	ENSSBOG00000019510 #19	ENSSBOG00000019633	KCNJ15 (ENSSBOG00000016506) #22	ERG (ENSSBOG00000026628) #23	ETS2 (ENSSBOG00000033069) #24	PSMG1 (ENSSBOG00000027602) #25	ENSSBOG00000019150 ##27	BRWD1 (ENSSBOG00000030561) #26	ENSSBOG00000032422 #27	GET1 (ENSSBOG00000020756) #28	LCA5L (ENSSBOG00000028818) #29	SH3BGR (ENSSBOG00000035842) #30	IGSF5 (ENSSBOG00000021300)	ENSSBOG00000016785 #32	DSCAM (ENSSBOG00000032237) #33	BACE2 (ENSSBOG00000025958) #34	FAM3B (ENSSBOG00000035878) #35	MX2 (ENSSBOG00000029626) #36
Capuchin	MODERN SPECIES	41	MORC3 (ENSCCAG00000036336)	CHAF1B (ENSCCAG00000035975)	CLDN14 (ENSCCAG00000015219)	SIM2 (ENSCCAG00000026136) #9	HLCS (ENSCCAG00000036991) #10	RIPPLY3 (ENSCCAG00000034670) #12	PIGP (ENSCCAG00000036761) #13	ENSCCAG00000038088 #14	ENSCCAG00000033805 #14	ENSCCAG00000030643 #14	ENSCCAG00000034512 #16	ENSCCAG00000014797	DYRK1A (ENSCCAG00000024141) #17	KCNJ6 (ENSCCAG00000023161) #18	ENSCCAG00000030555	KCNJ15 (ENSCCAG00000004572) #22	ERG (ENSCCAG00000028041) #23	ETS2 (ENSCCAG00000032051) #24	PSMG1 (ENSCCAG00000036563) #25	BRWD1 (ENSCCAG00000032750) #26	ENSCCAG00000032877 #27	GET1 (ENSCCAG00000026562) #28	LCA5L (ENSCCAG00000021449) #29	SH3BGR (ENSCCAG00000036879) #30	IGSF5 (ENSCCAG00000034768)	PCP4 (ENSCCAG00000031003) #32
Mas night monkey	MODERN SPECIES	1376	ENSANAG00000030520	ENSANAG00000019825	SIM2 (ENSANAG00000038264) #9	ENSANAG00000034736 #11	HLCS (ENSANAG00000030482) #10	RIPPLY3 (ENSANAG00000029570) #12	PIGP (ENSANAG00000034997) #13	ENSANAG00000033496 #14	ENSANAG00000024896 #14	ENSANAG00000021305 #14	VPS26C (ENSANAG00000033846) #16	ENSANAG00000022579	DYRK1A (ENSANAG00000025205) #17	KCNJ6 (ENSANAG00000037322) #18	ENSANAG00000016826	KCNJ15 (ENSANAG00000019657) #22	ERG (ENSANAG00000027714) #23	ENSANAG00000019801	ETS2 (ENSANAG00000035263) #24	PSMG1 (ENSANAG00000029982) #25	BRWD1 (ENSANAG00000027426) #26	ENSANAG00000037575 #27	GET1 (ENSANAG00000014374) #28	LCA5L (ENSANAG00000036638) #29	SH3BGR (ENSANAG00000033495) #30	IGSF5 (ENSANAG00000023294)	PCP4 (ENSANAG00000022174) #32	DSCAM (ENSANAG00000029585) #33	ENSANAG00000034923	BACE2 (ENSANAG00000020891) #34	FAM3B (ENSANAG00000019755) #35
Tarsier	MODERN SPECIES	4129																KCNJ15 (ENSTSYG00000000921) #22	ERG (ENSTSYG00000000636) #23	ETS2 (ENSTSYG00000011695) #24	PSMG1 (ENSTSYG00000010512) #25	BRWD1 (ENSTSYG00000010572) #26	EPYC (ENSTSYG00000010156)	KERA (ENSTSYG00000010206)
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Bushbaby	MODERN SPECIES	295		ENSOGAG00000013645	CBR3 (ENSOGAG00000015372)	DOP1B (ENSOGAG00000011439)	MORC3 (ENSOGAG00000011451)	CHAF1B (ENSOGAG00000034514)	CLDN14 (ENSOGAG00000026091)	SIM2 (ENSOGAG00000028990) #9	HLCS (ENSOGAG00000002192) #10	RIPPLY3 (ENSOGAG00000006538) #12	PIGP (ENSOGAG00000011097) #13	TTC3 (ENSOGAG00000005512) #14	VPS26C (ENSOGAG00000005526) #16	DYRK1A (ENSOGAG00000011236) #17	KCNJ6 (ENSOGAG00000015429) #18	KCNJ15 (ENSOGAG00000007599) #22	ERG (ENSOGAG00000000044) #23	ETS2 (ENSOGAG00000006580) #24	PSMG1 (ENSOGAG00000032487) #25	BRWD1 (ENSOGAG00000009562) #26	ENSOGAG00000010329 ##27	GET1 (ENSOGAG00000026761) #28	ENSOGAG00000030055	LCA5L (ENSOGAG00000001718) #29	ENSOGAG00000031213	ENSOGAG00000024805	SH3BGR (ENSOGAG00000001720) #30	B3GALT5 (ENSOGAG00000008383) #31	ENSOGAG00000008386
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00940000153577.A	ENSGT00510000046499.tc.a.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a.a ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Mouse lemur	MODERN SPECIES	24	ENSMICG00000032128	ENSMICG00000043284	CBR3 (ENSMICG00000002179)	DOP1B (ENSMICG00000002181)	MORC3 (ENSMICG00000007884)	CHAF1B (ENSMICG00000013158)	SIM2 (ENSMICG00000013168) #9	HLCS (ENSMICG00000013188) #10	RIPPLY3 (ENSMICG00000031167) #12	ENSMICG00000027574 #13	TTC3 (ENSMICG00000006423) #14	VPS26C (ENSMICG00000006453) #16	ENSMICG00000038207	DYRK1A (ENSMICG00000010871) #17	KCNJ6 (ENSMICG00000010904) #18	KCNJ15 (ENSMICG00000045136) #22	ERG (ENSMICG00000003196) #23	ETS2 (ENSMICG00000026895) #24	ENSMICG00000027563	PSMG1 (ENSMICG00000000385) #25	BRWD1 (ENSMICG00000013213) #26	ENSMICG00000038583 #27	GET1 (ENSMICG00000015808) #28	ENSMICG00000046495 #29	ENSMICG00000015813 #29	SH3BGR (ENSMICG00000007755) #30	B3GALT5 (ENSMICG00000045304) #31	ENSMICG00000028713	PCP4 (ENSMICG00000015516) #32	DSCAM (ENSMICG00000042048) #33	RIPK4 (ENSMICG00000038490)
Lemuriformes_a	ANCESTRAL SPECIES	60	ENSGT00940000153577.A	ENSGT00510000046499.tc.a.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.a.a.a.b.b ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Greater bamboo lemur	MODERN SPECIES	555	ENSPSMG00000011231	CBR3 (ENSPSMG00000011227)	DOP1B (ENSPSMG00000011196)	MORC3 (ENSPSMG00000011069)	CHAF1B (ENSPSMG00000011013)	CLDN14 (ENSPSMG00000010992)	SIM2 (ENSPSMG00000010983) #9	HLCS (ENSPSMG00000010960) #10	RIPPLY3 (ENSPSMG00000010945) #12	PIGP (ENSPSMG00000010935) #13	ENSPSMG00000010922	TTC3 (ENSPSMG00000010906) #14	VPS26C (ENSPSMG00000010808) #16	DYRK1A (ENSPSMG00000010616) #17	KCNJ6 (ENSPSMG00000010437) #18	KCNJ15 (ENSPSMG00000010419) #22	ERG (ENSPSMG00000010141) #23
Coquerels sifaka	MODERN SPECIES	186	ENSPCOG00000016924	CBR3 (ENSPCOG00000018800)	DOP1B (ENSPCOG00000017014)	MORC3 (ENSPCOG00000014065)	CHAF1B (ENSPCOG00000013033)	SIM2 (ENSPCOG00000019862) #9	HLCS (ENSPCOG00000017343) #10	ENSPCOG00000023020	RIPPLY3 (ENSPCOG00000018211) #12	ENSPCOG00000015022 #13	TTC3 (ENSPCOG00000006603) #14	ENSPCOG00000026647	VPS26C (ENSPCOG00000027513) #16	DYRK1A (ENSPCOG00000019153) #17	KCNJ6 (ENSPCOG00000025899) #18	KCNJ15 (ENSPCOG00000026074) #22	ERG (ENSPCOG00000018128) #23	ETS2 (ENSPCOG00000003472) #24	PSMG1 (ENSPCOG00000015910) #25	ENSPCOG00000009124 #26	ENSPCOG00000018754 #26	ENSPCOG00000017286 ##27	GET1 (ENSPCOG00000014862) #28	ENSPCOG00000026254 #29	SH3BGR (ENSPCOG00000018334) #30	B3GALT5 (ENSPCOG00000017471) #31	ENSPCOG00000013389	PCP4 (ENSPCOG00000022744) #32	DSCAM (ENSPCOG00000017132) #33	ENSPCOG00000023190	BACE2 (ENSPCOG00000022910) #34
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Tree shrew	MODERN SPECIES	2809																KCNJ15 (ENSTBEG00000011232) #22	ERG (ENSTBEG00000011265) #23
Glires	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Lagomorpha	ANCESTRAL SPECIES	167	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24
Rabbit	MODERN SPECIES	460	ENSOCUG00000020989	ENSOCUG00000028182	CBR3 (ENSOCUG00000016759)	DOP1B (ENSOCUG00000016761)	MORC3 (ENSOCUG00000026340)	CHAF1B (ENSOCUG00000014008)	CLDN14 (ENSOCUG00000014024)	SIM2 (ENSOCUG00000012903) #9	HLCS (ENSOCUG00000029575) #10	RIPPLY3 (ENSOCUG00000021051) #12	PIGP (ENSOCUG00000022451) #13	TTC3 (ENSOCUG00000003483) #14	VPS26C (ENSOCUG00000014111) #16	DYRK1A (ENSOCUG00000005814) #17	KCNJ6 (ENSOCUG00000012419) #18	KCNJ15 (ENSOCUG00000024161) #22	ERG (ENSOCUG00000000104) #23	ETS2 (ENSOCUG00000005861) #24
Pika	MODERN SPECIES	4452														ENSOPRG00000009089	ENSOPRG00000018183	ENSOPRG00000009092 #22	ENSOPRG00000009095 #23
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00940000155686.n.a #37	ENSGT00510000046499.hc	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.bb #13	ENSGT00940000154465.C.w #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b.m #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00940000155686.n.a #37	ENSGT00510000046499.hc	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.bb #13	ENSGT00940000154465.C.w #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b.m #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989	ENSGT00940000160159	ENSGT00950000183152.B.c.a
Guinea pig	MODERN SPECIES	90		ENSCPOG00000015652 #37	CBR3 (ENSCPOG00000031877)	DOP1B (ENSCPOG00000013877)	MORC3 (ENSCPOG00000006321)	CHAF1B (ENSCPOG00000006333)	CLDN14 (ENSCPOG00000007601)	SIM2 (ENSCPOG00000023156) #9	HLCS (ENSCPOG00000007955) #10	ENSCPOG00000007156 #13	ENSCPOG00000032684 #14	ENSCPOG00000007158 #14	VPS26C (ENSCPOG00000013144) #16	DYRK1A (ENSCPOG00000037211) #17	KCNJ6 (ENSCPOG00000009568) #18	KCNJ15 (ENSCPOG00000019502) #22	ERG (ENSCPOG00000007484) #23	ETS2 (ENSCPOG00000015014) #24	PSMG1 (ENSCPOG00000027117) #25	ENSCPOG00000010784 #26	ENSCPOG00000039624 #26	HMGN1 (ENSCPOG00000033135) #27	GET1 (ENSCPOG00000040238) #28	LCA5L (ENSCPOG00000021836) #29	SH3BGR (ENSCPOG00000003488) #30	B3GALT5 (ENSCPOG00000035318) #31	ENSCPOG00000004718	RRP1B (ENSCPOG00000002396)	HSF2BP (ENSCPOG00000002394)	SIK1 (ENSCPOG00000026214)	Cryaa (ENSCPOG00000004350)
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00940000155686.n.a #37	ENSGT00510000046499.hc	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.bb #13	ENSGT00940000154465.C.w #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b.m #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989	ENSGT00940000160159	ENSGT00950000183152.B.c.a
Degu	MODERN SPECIES	86								PIGP (ENSODEG00000011154) #13	ENSODEG00000012435 #14	ENSODEG00000012671 #14	VPS26C (ENSODEG00000011654) #16	ENSODEG00000019985	DYRK1A (ENSODEG00000011707) #17	KCNJ6 (ENSODEG00000011396) #18	ENSODEG00000011894	KCNJ15 (ENSODEG00000012281) #22	ERG (ENSODEG00000011796) #23	ETS2 (ENSODEG00000012054) #24	PSMG1 (ENSODEG00000013481) #25	ENSODEG00000012050 #26	ENSODEG00000011845 #26	GET1 (ENSODEG00000011999) #28	LCA5L (ENSODEG00000012419) #29	SH3BGR (ENSODEG00000013522) #30	ENSODEG00000013679	ENSODEG00000012206	ENSODEG00000013785	RRP1B (ENSODEG00000013177)	HSF2BP (ENSODEG00000011763)	SIK1 (ENSODEG00000012072)	CRYAA (ENSODEG00000014166)
Long-tailed chinchilla	MODERN SPECIES	114	CBR3 (ENSCLAG00000008082)	DOP1B (ENSCLAG00000005290)	MORC3 (ENSCLAG00000006634)	CHAF1B (ENSCLAG00000007456)	CLDN14 (ENSCLAG00000009427)	SIM2 (ENSCLAG00000012698) #9	HLCS (ENSCLAG00000004714) #10	ENSCLAG00000006237 #12	ENSCLAG00000006455 #14	ENSCLAG00000008569 #14	ENSCLAG00000009431 #14	VPS26C (ENSCLAG00000010591) #16	DYRK1A (ENSCLAG00000011834) #17	KCNJ6 (ENSCLAG00000005671) #18	ENSCLAG00000008450	KCNJ15 (ENSCLAG00000007017) #22	ERG (ENSCLAG00000005608) #23	ETS2 (ENSCLAG00000005803) #24	PSMG1 (ENSCLAG00000006759) #25	ENSCLAG00000004395 #26	HMGN1 (ENSCLAG00000005744) #27	GET1 (ENSCLAG00000005886) #28	SH3BGR (ENSCLAG00000008599) #30	ENSCLAG00000008933	B3GALT5 (ENSCLAG00000009203) #31	ENSCLAG00000006218	ENSCLAG00000008829	RRP1B (ENSCLAG00000005622)	HSF2BP (ENSCLAG00000006525)	SIK1 (ENSCLAG00000004717)	CRYAA (ENSCLAG00000008715)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000015583	MORC3 (ENSHGLG00000018450)	ENSHGLG00000035736	ENSHGLG00000020850	CHAF1B (ENSHGLG00000010107)	CLDN14 (ENSHGLG00000009298)	ENSHGLG00000009709	SIM2 (ENSHGLG00000008945) #9	HLCS (ENSHGLG00000008266) #10	ENSHGLG00000044887 #12	ENSHGLG00000044048 #13	TTC3 (ENSHGLG00000005139) #14	VPS26C (ENSHGLG00000005099) #16	DYRK1A (ENSHGLG00000004983) #17	KCNJ6 (ENSHGLG00000018429) #18	KCNJ15 (ENSHGLG00000046846) #22	ERG (ENSHGLG00000017640) #23	ENSHGLG00000042102	ETS2 (ENSHGLG00000017830) #24	ENSHGLG00000045422	PSMG1 (ENSHGLG00000017867) #25	ENSHGLG00000017831 #26	ENSHGLG00000042854 #26	ENSHGLG00000034155	ENSHGLG00000013690 #27	GET1 (ENSHGLG00000012972) #28	ENSHGLG00000015714 #29	ENSHGLG00000044589 #29	SH3BGR (ENSHGLG00000015469) #30	ENSHGLG00000040175 #31	ENSHGLG00000015085
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686 #37
Arctic ground squirrel	MODERN SPECIES	212													VPS26C (ENSUPAG00010020169) #16	DYRK1A (ENSUPAG00010020176) #17	KCNJ6 (ENSUPAG00010020183) #18	KCNJ15 (ENSUPAG00010020189) #22	ERG (ENSUPAG00010020197) #23	ETS2 (ENSUPAG00010020230) #24	BRWD1 (ENSUPAG00010020246) #26	ENSUPAG00010020321	ENSUPAG00010020326 #27	ENSUPAG00010020344 #28	LCA5L (ENSUPAG00010020362) #29	SH3BGR (ENSUPAG00010020382) #30	ENSUPAG00010020395	B3GALT5 (ENSUPAG00010020398) #31	ENSUPAG00010020403	PCP4 (ENSUPAG00010020435) #32	DSCAM (ENSUPAG00010020438) #33	BACE2 (ENSUPAG00010020456) #34
Squirrel	MODERN SPECIES	100	CLIC6 (ENSSTOG00000014035)	RUNX1 (ENSSTOG00000020082)	SETD4 (ENSSTOG00000013526)	CBR3 (ENSSTOG00000012790)	DOP1B (ENSSTOG00000003970)	MORC3 (ENSSTOG00000028859)	CHAF1B (ENSSTOG00000001427)	CLDN14 (ENSSTOG00000023003)	HLCS (ENSSTOG00000015476) #10	ENSSTOG00000031463 #12	PIGP (ENSSTOG00000010943) #13	ENSSTOG00000004274 #14	ENSSTOG00000020762 #16	DYRK1A (ENSSTOG00000016151) #17	KCNJ6 (ENSSTOG00000016154) #18	KCNJ15 (ENSSTOG00000000052) #22	ERG (ENSSTOG00000025814) #23	ETS2 (ENSSTOG00000024655) #24	PSMG1 (ENSSTOG00000007084) #25	BRWD1 (ENSSTOG00000027149) #26	HMGN1 (ENSSTOG00000030815) #27	GET1 (ENSSTOG00000012736) #28	SH3BGR (ENSSTOG00000020100) #30	B3GALT5 (ENSSTOG00000012749) #31	ENSSTOG00000002986	PCP4 (ENSSTOG00000033674) #32	DSCAM (ENSSTOG00000004849) #33	BACE2 (ENSSTOG00000011669) #34	MX1 (ENSSTOG00000012846) #37	FAM3B (ENSSTOG00000006382) #35	TMPRSS2 (ENSSTOG00000012868)
Alpin marmot	MODERN SPECIES	4	SETD4 (ENSMMMG00000002557)	ENSMMMG00000002598	ENSMMMG00000002635	CBR3 (ENSMMMG00000002648)	DOP1B (ENSMMMG00000002673)	MORC3 (ENSMMMG00000002800)	CHAF1B (ENSMMMG00000002837)	CLDN14 (ENSMMMG00000002911)	ENSMMMG00000002958 #10	ENSMMMG00000002971 #12	PIGP (ENSMMMG00000002981) #13	TTC3 (ENSMMMG00000003016) #14	VPS26C (ENSMMMG00000003435) #16	DYRK1A (ENSMMMG00000003463) #17	KCNJ6 (ENSMMMG00000003548) #18	KCNJ15 (ENSMMMG00000003594) #22	ERG (ENSMMMG00000003632) #23	ETS2 (ENSMMMG00000004068) #24	PSMG1 (ENSMMMG00000004106) #25	ENSMMMG00000004110	BRWD1 (ENSMMMG00000004116) #26	HMGN1 (ENSMMMG00000004197) #27	GET1 (ENSMMMG00000004202) #28	LCA5L (ENSMMMG00000004259) #29	SH3BGR (ENSMMMG00000004305) #30	ENSMMMG00000004462	B3GALT5 (ENSMMMG00000004484) #31	ENSMMMG00000004498	PCP4 (ENSMMMG00000004533) #32	DSCAM (ENSMMMG00000004573) #33	BACE2 (ENSMMMG00000004641) #34
Eurasian red squirrel	MODERN SPECIES	1	CBR1 (ENSSVLG00005020974)	CBR3 (ENSSVLG00005020949)	DOP1B (ENSSVLG00005020661)	MORC3 (ENSSVLG00005020603)	CHAF1B (ENSSVLG00005020497)	CLDN14 (ENSSVLG00005020475)	SIM2 (ENSSVLG00005020374) #9	ENSSVLG00005020331 #10	ENSSVLG00005020110 #13	ENSSVLG00005020080 #14	ENSSVLG00005020036 #14	ENSSVLG00005019788 #16	ENSSVLG00005019993 #16	DYRK1A (ENSSVLG00005019571) #17	KCNJ6 (ENSSVLG00005019383) #18	KCNJ15 (ENSSVLG00005019329) #22	ERG (ENSSVLG00005018996) #23	ETS2 (ENSSVLG00005018858) #24	PSMG1 (ENSSVLG00005018720) #25	ENSSVLG00005018680	ENSSVLG00005018655 #26	ENSSVLG00005018529 #27	GET1 (ENSSVLG00005018408) #28	LCA5L (ENSSVLG00005018302) #29	SH3BGR (ENSSVLG00005018209) #30	B3GALT5 (ENSSVLG00005018186) #31	ENSSVLG00005018094	PCP4 (ENSSVLG00005018045) #32	DSCAM (ENSSVLG00005017352) #33	BACE2 (ENSSVLG00005017213) #34	ENSSVLG00005016342 #37
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Muroidea	ANCESTRAL SPECIES	11	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686 #37
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00510000046499.pc.a	ENSGT00510000046499.pc.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00510000046499.pc.a	ENSGT00510000046499.pc.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00510000046499.pc.a	ENSGT00510000046499.pc.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37	ENSGT00950000183004.a.b.a.b #35
Chinese hamster chok1gshd	MODERN SPECIES	382	ENSCGRG00001008734	ENSCGRG00001013790	Cbr3 (ENSCGRG00001016506)	Dop1b (ENSCGRG00001018448)	Morc3 (ENSCGRG00001017226)	Chaf1b (ENSCGRG00001012715)	Cldn14 (ENSCGRG00001011829)	Sim2 (ENSCGRG00001015882) #9	Hlcs (ENSCGRG00001019608) #10	Ripply3 (ENSCGRG00001015129) #12	ENSCGRG00001016611 #13	Ttc3 (ENSCGRG00001022857) #14	Vps26c (ENSCGRG00001014527) #16	Dyrk1a (ENSCGRG00001000504) #17	Kcnj6 (ENSCGRG00001008563) #18	Kcnj15 (ENSCGRG00001014785) #22	Erg (ENSCGRG00001005751) #23	Ets2 (ENSCGRG00001019241) #24	Psmg1 (ENSCGRG00001023463) #25	Brwd1 (ENSCGRG00001019901) #26	Hmgn1 (ENSCGRG00001006425) #27	ENSCGRG00001015026 #28	ENSCGRG00001008454	Lca5l (ENSCGRG00001001508) #29	ENSCGRG00001018634 #30	B3galt5 (ENSCGRG00001003465) #31	Igsf5 (ENSCGRG00001017358)	ENSCGRG00001011223 #32	Dscam (ENSCGRG00001020907) #33	Bace2 (ENSCGRG00001006826) #34	Mx1 (ENSCGRG00001009938) #37
Golden Hamster	MODERN SPECIES	659	Setd4 (ENSMAUG00000007270)	ENSMAUG00000000721	Cbr3 (ENSMAUG00000000128)	Dop1b (ENSMAUG00000007649)	Morc3 (ENSMAUG00000010895)	Chaf1b (ENSMAUG00000010565)	Cldn14 (ENSMAUG00000016301)	Sim2 (ENSMAUG00000012299) #9	Hlcs (ENSMAUG00000000186) #10	Ripply3 (ENSMAUG00000017474) #12	Pigp (ENSMAUG00000010045) #13	ENSMAUG00000008161 #14	ENSMAUG00000007378 #14	Dyrk1a (ENSMAUG00000018415) #17	Kcnj6 (ENSMAUG00000011546) #18	Kcnj15 (ENSMAUG00000009656) #22	Erg (ENSMAUG00000012151) #23	Ets2 (ENSMAUG00000012072) #24	Psmg1 (ENSMAUG00000014265) #25	ENSMAUG00000004019 #26	ENSMAUG00000005957 #26	Hmgn1 (ENSMAUG00000009433) #27	ENSMAUG00000008620 #28	Lca5l (ENSMAUG00000001467) #29	ENSMAUG00000001722 #30	Igsf5 (ENSMAUG00000018757)	ENSMAUG00000001783 #32	Dscam (ENSMAUG00000002565) #33	Bace2 (ENSMAUG00000018970) #34	Mx1 (ENSMAUG00000000088) #37	Fam3b (ENSMAUG00000018355) #35
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00510000046499.qc	ENSGT00510000046499.pc.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Northern American deer mouse	MODERN SPECIES	3						Chaf1b (ENSPEMG00000011223)	Cldn14 (ENSPEMG00000011575)	Sim2 (ENSPEMG00000012087) #9	Hlcs (ENSPEMG00000013311) #10	Ripply3 (ENSPEMG00000013694) #12	Pigp (ENSPEMG00000014214) #13	Ttc3 (ENSPEMG00000024827) #14	Vps26c (ENSPEMG00000016213) #16	Dyrk1a (ENSPEMG00000017620) #17	Kcnj6 (ENSPEMG00000000223) #18	Kcnj15 (ENSPEMG00000001507) #22	Erg (ENSPEMG00000008582) #23	Ets2 (ENSPEMG00000012273) #24	ENSPEMG00000031015	Psmg1 (ENSPEMG00000010416) #25	Brwd1 (ENSPEMG00000014898) #26	ENSPEMG00000020156 #27	ENSPEMG00000027492 #28	Lca5l (ENSPEMG00000020214) #29	ENSPEMG00000003252 #30	B3galt5 (ENSPEMG00000006922) #31	Igsf5 (ENSPEMG00000007617)	Itgb2l (ENSPEMG00000009654)	ENSPEMG00000029164 #32	Dscam (ENSPEMG00000013979) #33	Bace2 (ENSPEMG00000015582) #34
Prairie vole	MODERN SPECIES	7	Cbr3 (ENSMOCG00000014221)	Dop1b (ENSMOCG00000016858)	ENSMOCG00000010249	Morc3 (ENSMOCG00000013833)	Chaf1b (ENSMOCG00000016730)	Cldn14 (ENSMOCG00000014070)	Sim2 (ENSMOCG00000009487) #9	Hlcs (ENSMOCG00000021140) #10	ENSMOCG00000005338	Ripply3 (ENSMOCG00000018664) #12	Pigp (ENSMOCG00000018412) #13	Ttc3 (ENSMOCG00000016472) #14	Vps26c (ENSMOCG00000001783) #16	Dyrk1a (ENSMOCG00000021125) #17	Kcnj6 (ENSMOCG00000021427) #18	Kcnj15 (ENSMOCG00000022139) #22	Erg (ENSMOCG00000016605) #23	Ets2 (ENSMOCG00000011500) #24	Psmg1 (ENSMOCG00000019906) #25	ENSMOCG00000017915 #26	ENSMOCG00000005141 #26	ENSMOCG00000016951	ENSMOCG00000018055 #27	ENSMOCG00000016062 #28	Lca5l (ENSMOCG00000008785) #29	ENSMOCG00000000644 #30	ENSMOCG00000012887 #31	Or4c117 (ENSMOCG00000022094)	ENSMOCG00000007303	Or4a2 (ENSMOCG00000009982)	Or4a68 (ENSMOCG00000003063)
Murinae	ANCESTRAL SPECIES	13	ENSGT00940000153577.A	ENSGT00510000046499.pc.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Mus	ANCESTRAL SPECIES	13	ENSGT00940000153577.A	ENSGT00510000046499.pc.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Mus_A	ANCESTRAL SPECIES	18	ENSGT00510000046499.pc.a.e	ENSGT00510000046499.pc.a.f	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.u.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Mus_B	ANCESTRAL SPECIES	18	ENSGT00510000046499.pc.a.e	ENSGT00510000046499.qc	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.u.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
Mouse	MODERN SPECIES	7	Cbr1 (ENSMUSG00000051483)	Gm5678 (ENSMUSG00000082815)	Cbr3 (ENSMUSG00000022947)	Dop1b (ENSMUSG00000022946)	Morc3 (ENSMUSG00000039456)	Chaf1b (ENSMUSG00000022945)	Cldn14 (ENSMUSG00000047109)	Sim2 (ENSMUSG00000062713) #9	Hlcs (ENSMUSG00000040820) #10	Ripply3 (ENSMUSG00000022941) #12	Pigp (ENSMUSG00000022940) #13	Ttc3 (ENSMUSG00000040785) #14	Vps26c (ENSMUSG00000022898) #16	Dyrk1a (ENSMUSG00000022897) #17	Kcnj6 (ENSMUSG00000043301) #18	Kcnj15 (ENSMUSG00000062609) #22	Erg (ENSMUSG00000040732) #23	Ets2 (ENSMUSG00000022895) #24	Psmg1 (ENSMUSG00000022913) #25	Brwd1 (ENSMUSG00000022914) #26	Hmgn1 (ENSMUSG00000040681) #27	Get1 (ENSMUSG00000023147)	Lca5l (ENSMUSG00000045275) #29	Sh3bgr (ENSMUSG00000040666) #30	B3galt5 (ENSMUSG00000074892) #31	Igsf5 (ENSMUSG00000000159)	Gm49948 (ENSMUSG00000117081)	Itgb2l (ENSMUSG00000000157)	Pcp4 (ENSMUSG00000090223)	Dscam (ENSMUSG00000050272) #33	Bace2 (ENSMUSG00000040605) #34
Mus_C	ANCESTRAL SPECIES	12	ENSGT00510000046499.pc.a.e	ENSGT00510000046499.qc	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.u.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00940000155686.j #37
spretus	MODERN SPECIES	7	Setd4 (MGP_SPRETEiJ_G0021885)	Gm5678 (MGP_SPRETEiJ_G0021886)	Cbr3 (MGP_SPRETEiJ_G0021887)	Dop1b (MGP_SPRETEiJ_G0021888)	Morc3 (MGP_SPRETEiJ_G0021889)	Chaf1b (MGP_SPRETEiJ_G0021890)	Cldn14 (MGP_SPRETEiJ_G0021891)	Sim2 (MGP_SPRETEiJ_G0021892) #9	Hlcs (MGP_SPRETEiJ_G0021893) #10	Ripply3 (MGP_SPRETEiJ_G0021894) #12	MGP_SPRETEiJ_G0021895 #13	Ttc3 (MGP_SPRETEiJ_G0021896) #14	Vps26c (MGP_SPRETEiJ_G0021897) #16	Dyrk1a (MGP_SPRETEiJ_G0021898) #17	Kcnj6 (MGP_SPRETEiJ_G0021899) #18	Kcnj15 (MGP_SPRETEiJ_G0021900) #22	Erg (MGP_SPRETEiJ_G0021901) #23	Ets2 (MGP_SPRETEiJ_G0021902) #24	Psmg1 (MGP_SPRETEiJ_G0021903) #25	Hmgn1 (MGP_SPRETEiJ_G0021905) #27	MGP_SPRETEiJ_G0021906 #28	Lca5l (MGP_SPRETEiJ_G0021907) #29	MGP_SPRETEiJ_G0021908 #30	B3galt5 (MGP_SPRETEiJ_G0021909) #31	Igsf5 (MGP_SPRETEiJ_G0021910)	Itgb2l (MGP_SPRETEiJ_G0021911)	MGP_SPRETEiJ_G0021912 #32	Dscam (MGP_SPRETEiJ_G0021913) #33	Bace2 (MGP_SPRETEiJ_G0021914) #34	MGP_SPRETEiJ_G0021915 #37	Fam3b (MGP_SPRETEiJ_G0021916) #35
Steppe mouse	MODERN SPECIES	3296	Dop1b (ENSMSIG00000009533)	Morc3 (ENSMSIG00000009666)	Chaf1b (ENSMSIG00000009725)	Cldn14 (ENSMSIG00000009771)	ENSMSIG00000009798	Sim2 (ENSMSIG00000009813) #9	Hlcs (ENSMSIG00000009840) #10	ENSMSIG00000009933	Ripply3 (ENSMSIG00000009954) #12	ENSMSIG00000009975 #13	Ttc3 (ENSMSIG00000010058) #14	Vps26c (ENSMSIG00000010447) #16	ENSMSIG00000010486	Dyrk1a (ENSMSIG00000010496) #17	Kcnj6 (ENSMSIG00000010556) #18	Kcnj15 (ENSMSIG00000010646) #22
Ryukyu mouse	MODERN SPECIES	7	Setd4 (MGP_CAROLIEiJ_G0020979)	Cbr1 (MGP_CAROLIEiJ_G0020980)	Cbr3 (MGP_CAROLIEiJ_G0020981)	Dop1b (MGP_CAROLIEiJ_G0020982)	Morc3 (MGP_CAROLIEiJ_G0020983)	MGP_CAROLIEiJ_G0020984	Cldn14 (MGP_CAROLIEiJ_G0020985)	Sim2 (MGP_CAROLIEiJ_G0020986) #9	Hlcs (MGP_CAROLIEiJ_G0020987) #10	Ripply3 (MGP_CAROLIEiJ_G0020988) #12	MGP_CAROLIEiJ_G0020989 #13	Ttc3 (MGP_CAROLIEiJ_G0020990) #14	Vps26c (MGP_CAROLIEiJ_G0020991) #16	Dyrk1a (MGP_CAROLIEiJ_G0020992) #17	Kcnj6 (MGP_CAROLIEiJ_G0020993) #18	Kcnj15 (MGP_CAROLIEiJ_G0020994) #22	Erg (MGP_CAROLIEiJ_G0020995) #23	Ets2 (MGP_CAROLIEiJ_G0020996) #24	Psmg1 (MGP_CAROLIEiJ_G0020997) #25	Brwd1 (MGP_CAROLIEiJ_G0020998) #26	MGP_CAROLIEiJ_G0020999 #27	MGP_CAROLIEiJ_G0021000 #28	Lca5l (MGP_CAROLIEiJ_G0021001) #29	MGP_CAROLIEiJ_G0021002 #30	B3galt5 (MGP_CAROLIEiJ_G0021003) #31	Igsf5 (MGP_CAROLIEiJ_G0021004)	Itgb2l (MGP_CAROLIEiJ_G0021005)	MGP_CAROLIEiJ_G0021006 #32	Dscam (MGP_CAROLIEiJ_G0021007) #33	Bace2 (MGP_CAROLIEiJ_G0021008) #34	MGP_CAROLIEiJ_G0021009 #37
Shrew mouse	MODERN SPECIES	3	Setd4 (MGP_PahariEiJ_G0016684)	MGP_PahariEiJ_G0016685	Cbr3 (MGP_PahariEiJ_G0016686)	Dop1b (MGP_PahariEiJ_G0016687)	Morc3 (MGP_PahariEiJ_G0016688)	Chaf1b (MGP_PahariEiJ_G0016689)	Cldn14 (MGP_PahariEiJ_G0016690)	Sim2 (MGP_PahariEiJ_G0016691) #9	Hlcs (MGP_PahariEiJ_G0016692) #10	Ripply3 (MGP_PahariEiJ_G0016693) #12	MGP_PahariEiJ_G0016694 #13	MGP_PahariEiJ_G0016695 #14	Vps26c (MGP_PahariEiJ_G0016696) #16	Dyrk1a (MGP_PahariEiJ_G0016697) #17	Kcnj6 (MGP_PahariEiJ_G0016698) #18	Kcnj15 (MGP_PahariEiJ_G0016699) #22	Erg (MGP_PahariEiJ_G0016700) #23	Ets2 (MGP_PahariEiJ_G0016701) #24	Psmg1 (MGP_PahariEiJ_G0016702) #25	MGP_PahariEiJ_G0016703 #26	MGP_PahariEiJ_G0016704	MGP_PahariEiJ_G0016705 #28	Lca5l (MGP_PahariEiJ_G0016706) #29	MGP_PahariEiJ_G0016707 #30	B3galt5 (MGP_PahariEiJ_G0016708) #31	Igsf5 (MGP_PahariEiJ_G0016709)	Itgb2l (MGP_PahariEiJ_G0016710)	MGP_PahariEiJ_G0016711 #32	Dscam (MGP_PahariEiJ_G0016712) #33	Bace2 (MGP_PahariEiJ_G0016713) #34	MGP_PahariEiJ_G0016714 #37
Rat	MODERN SPECIES	2	Cbr3 (ENSRNOG00000001701)	Dop1b (ENSRNOG00000051204)	Ifitm7 (ENSRNOG00000021674)	Morc3 (ENSRNOG00000026236)	Chaf1b (ENSRNOG00000001692)	Cldn14 (ENSRNOG00000001691)	Sim2 (ENSRNOG00000054203) #9	Hlcs (ENSRNOG00000001686) #10	LOC108352309 (ENSRNOG00000065104)	Ripply3 (ENSRNOG00000001684) #12	Pigp (ENSRNOG00000039850) #13	Ttc3 (ENSRNOG00000001682) #14	Vps26c (ENSRNOG00000001681) #16	Dyrk1a (ENSRNOG00000001662) #17	Kcnj6 (ENSRNOG00000001658) #18	Kcnj15 (ENSRNOG00000062944) #22	Erg (ENSRNOG00000001652) #23	Ets2 (ENSRNOG00000001647) #24	Psmg1 (ENSRNOG00000001643) #25	Brwd1 (ENSRNOG00000001632) #26	ENSRNOG00000067977	Hmgn1 (ENSRNOG00000048226) #27	Get1 (ENSRNOG00000001629)	Lca5l (ENSRNOG00000028248) #29	Sh3bgr (ENSRNOG00000028238) #30	B3galt5 (ENSRNOG00000030983) #31	Igsf5 (ENSRNOG00000028216)	ENSRNOG00000063024	Pcp4 (ENSRNOG00000001628) #32	Dscam (ENSRNOG00000027992) #33	Bace2 (ENSRNOG00000001953) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	531																Kcnj15 (ENSNGAG00000012200) #22	Erg (ENSNGAG00000019090) #23	Ets2 (ENSNGAG00000017753) #24	Psmg1 (ENSNGAG00000018513) #25	ENSNGAG00000000424 #26	ENSNGAG00000001381 #26	Hmgn1 (ENSNGAG00000004731) #27	ENSNGAG00000009726 #28	Lca5l (ENSNGAG00000013269) #29	ENSNGAG00000001301 #30	B3galt5 (ENSNGAG00000004051) #31	Igsf5 (ENSNGAG00000008533)	ENSNGAG00000016455 #32	Dscam (ENSNGAG00000019173) #33
Lesser Egyptian jerboa	MODERN SPECIES	54	ENSJJAG00000011763	Cbr3 (ENSJJAG00000011377)	Dop1b (ENSJJAG00000014829)	ENSJJAG00000023251	Chaf1b (ENSJJAG00000019129)	Cldn14 (ENSJJAG00000012260)	Sim2 (ENSJJAG00000010920) #9	ENSJJAG00000022662 #10	Ripply3 (ENSJJAG00000014562) #12	ENSJJAG00000022631 #13	ENSJJAG00000011573 #14	ENSJJAG00000018355 #14	Vps26c (ENSJJAG00000012735) #16	Dyrk1a (ENSJJAG00000022874) #17	Kcnj6 (ENSJJAG00000010439) #18	Kcnj15 (ENSJJAG00000016880) #22	Erg (ENSJJAG00000024273) #23	Ets2 (ENSJJAG00000000366) #24	Psmg1 (ENSJJAG00000000631) #25	ENSJJAG00000014608 #26	ENSJJAG00000010871 #26	ENSJJAG00000013400 #27	ENSJJAG00000014499 #28	Lca5l (ENSJJAG00000017192) #29	ENSJJAG00000018659 #30	Igsf5 (ENSJJAG00000000540)	ENSJJAG00000013366 #32	Dscam (ENSJJAG00000010430) #33	Bace2 (ENSJJAG00000006557) #34	ENSJJAG00000012773	ENSJJAG00000023642 #35
Kangaroo rat	MODERN SPECIES	423	Cbr3 (ENSDORG00000003691)	Dop1b (ENSDORG00000002645)	Morc3 (ENSDORG00000007125)	Chaf1b (ENSDORG00000012470)	Cldn14 (ENSDORG00000016397)	Sim2 (ENSDORG00000011548) #9	ENSDORG00000025735 #10	Ripply3 (ENSDORG00000006654) #12	Pigp (ENSDORG00000005758) #13	ENSDORG00000029044 #14	ENSDORG00000028545 #14	Vps26c (ENSDORG00000008988) #16	ENSDORG00000030164	Dyrk1a (ENSDORG00000002472) #17	Kcnj6 (ENSDORG00000010124) #18	Kcnj15 (ENSDORG00000023822) #22	Erg (ENSDORG00000009281) #23
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000011549	ENSGT00950000182802.A #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.b #27	ENSGT00940000164489	ENSGT00390000011549	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Carnivora	ANCESTRAL SPECIES	10	ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Caniformia	ANCESTRAL SPECIES		ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Caniformia_b	ANCESTRAL SPECIES		ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Ursidae	ANCESTRAL SPECIES	1	ENSGT00510000046499.`c.a.g.b.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Ursus	ANCESTRAL SPECIES	49	ENSGT00510000046499.`c.b.a.a.b	ENSGT00510000046499.`c.a.g.b.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00530000064267 #32
Polar bear	MODERN SPECIES	240	ENSUMAG00000020293	ENSUMAG00000020299	CBR3 (ENSUMAG00000020313)	DOP1B (ENSUMAG00000020358)	MORC3 (ENSUMAG00000020612)	CHAF1B (ENSUMAG00000020659)	ENSUMAG00000020663	SIM2 (ENSUMAG00000020665) #9	HLCS (ENSUMAG00000000070) #10	RIPPLY3 (ENSUMAG00000000142) #12	PIGP (ENSUMAG00000000187) #13	TTC3 (ENSUMAG00000000221) #14	VPS26C (ENSUMAG00000000275) #16	DYRK1A (ENSUMAG00000000314) #17	KCNJ6 (ENSUMAG00000000333) #18	KCNJ15 (ENSUMAG00000000438) #22	ERG (ENSUMAG00000000447) #23	ETS2 (ENSUMAG00000000475) #24	PSMG1 (ENSUMAG00000000490) #25	BRWD1 (ENSUMAG00000000587) #26	GET1 (ENSUMAG00000001833) #28	LCA5L (ENSUMAG00000001836) #29	SH3BGR (ENSUMAG00000001849) #30	B3GALT5 (ENSUMAG00000001861) #31	PCP4 (ENSUMAG00000001875) #32
American black bear	MODERN SPECIES	5861																KCNJ15 (ENSUAMG00000018297) #22
Giant Panda	MODERN SPECIES		SETD4 (ENSAMEG00000005370)	ENSAMEG00000028070	ENSAMEG00000005440	CBR3 (ENSAMEG00000005441)	DOP1B (ENSAMEG00000005447)	MORC3 (ENSAMEG00000005512)	CHAF1B (ENSAMEG00000005560)	CLDN14 (ENSAMEG00000018735)	SIM2 (ENSAMEG00000005588) #9	HLCS (ENSAMEG00000005602) #10	ENSAMEG00000028137 #14	VPS26C (ENSAMEG00000009425) #16	DYRK1A (ENSAMEG00000018223) #17	KCNJ6 (ENSAMEG00000018222) #18	ENSAMEG00000029134	KCNJ15 (ENSAMEG00000005431) #22	ERG (ENSAMEG00000016610) #23	ETS2 (ENSAMEG00000016631) #24	PSMG1 (ENSAMEG00000014078) #25	BRWD1 (ENSAMEG00000014080) #26	HMGN1 (ENSAMEG00000014100) #27	GET1 (ENSAMEG00000014104) #28	LCA5L (ENSAMEG00000014108) #29	SH3BGR (ENSAMEG00000028047) #30	B3GALT5 (ENSAMEG00000019434) #31	ENSAMEG00000006410	DSCAM (ENSAMEG00000005759) #33	BACE2 (ENSAMEG00000005103) #34	FAM3B (ENSAMEG00000005115) #35	MX1 (ENSAMEG00000010494) #37	TMPRSS2 (ENSAMEG00000010563)
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00510000046499.`c.b	ENSGT00510000046499.`c.a.h	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Ferret	MODERN SPECIES	248	ENSMPUG00000008180	CBR3 (ENSMPUG00000008185)	DOP1B (ENSMPUG00000008193)	MORC3 (ENSMPUG00000008213)	CHAF1B (ENSMPUG00000008227)	CLDN14 (ENSMPUG00000019062)	ENSMPUG00000008235	SIM2 (ENSMPUG00000008240) #9	HLCS (ENSMPUG00000008271) #10	RIPPLY3 (ENSMPUG00000008305) #12	PIGP (ENSMPUG00000008312) #13	TTC3 (ENSMPUG00000008316) #14	VPS26C (ENSMPUG00000008447) #16	DYRK1A (ENSMPUG00000008456) #17	KCNJ6 (ENSMPUG00000008470) #18	KCNJ15 (ENSMPUG00000019063) #22	ERG (ENSMPUG00000008474) #23	ENSMPUG00000008483	ENSMPUG00000008489	ETS2 (ENSMPUG00000008494) #24	PSMG1 (ENSMPUG00000008503) #25	BRWD1 (ENSMPUG00000008515) #26	HMGN1 (ENSMPUG00000008550) #27	GET1 (ENSMPUG00000008557) #28	LCA5L (ENSMPUG00000008561) #29	SH3BGR (ENSMPUG00000008609) #30	B3GALT5 (ENSMPUG00000008621) #31	ENSMPUG00000008652	PCP4 (ENSMPUG00000008663) #32	ENSMPUG00000008669 #33	ENSMPUG00000008687 #33
American mink	MODERN SPECIES	203	ENSNVIG00000015758	ENSNVIG00000015812	DOP1B (ENSNVIG00000015825)	MORC3 (ENSNVIG00000015870)	CHAF1B (ENSNVIG00000015898)	CLDN14 (ENSNVIG00000015954)	SIM2 (ENSNVIG00000015967) #9	HLCS (ENSNVIG00000016037) #10	RIPPLY3 (ENSNVIG00000016055) #12	ENSNVIG00000016074 #13	ENSNVIG00000016101 #14	ENSNVIG00000016126 #14	VPS26C (ENSNVIG00000016174) #16	DYRK1A (ENSNVIG00000016237) #17	IRK6 (ENSNVIG00000016616) #18	KCNJ15 (ENSNVIG00000016642) #22	ERG (ENSNVIG00000016660) #23	ETS2 (ENSNVIG00000016916) #24	PSMG1 (ENSNVIG00000016937) #25	BRWD1 (ENSNVIG00000016970) #26	ENSNVIG00000017061 #27	WRB (ENSNVIG00000017088) #30	LCA5L (ENSNVIG00000017153) #29
Canidae	ANCESTRAL SPECIES	39	ENSGT00510000046499.`c.a.g.a	ENSGT00510000046499.`c.a.g.b.c	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a.`b #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000016972.b	ENSGT00950000182802.A.ab.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00510000046499.`c.a.g.a	ENSGT00510000046499.`c.a.g.b.c	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a.`b #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000016972.b	ENSGT00950000182802.A.ab.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Dingo	MODERN SPECIES	328	ENSCAFG00020024547	CBR3 (ENSCAFG00020024542)	DOP1B (ENSCAFG00020024481)	MORC3 (ENSCAFG00020024440)	CHAF1B (ENSCAFG00020024433)	CLDN14 (ENSCAFG00020024431)	SIM2 (ENSCAFG00020024427) #9	ENSCAFG00020024422 #10	ENSCAFG00020024407 #12	ENSCAFG00020024400 #13	ENSCAFG00020024394 #14	ENSCAFG00020024382 #14	VPS26C (ENSCAFG00020024376) #16	DYRK1A (ENSCAFG00020024369) #17	KCNJ6 (ENSCAFG00020024367) #18	KCNJ15 (ENSCAFG00020024361) #22	ERG (ENSCAFG00020024360) #23	ETS2 (ENSCAFG00020024353) #24	PSMG1 (ENSCAFG00020024349) #25	ENSCAFG00020024347 #26	ENSCAFG00020024338 #26	ENSCAFG00020024332	ENSCAFG00020024329 #27	GET1 (ENSCAFG00020024327) #28	LCA5L (ENSCAFG00020024326) #29	SH3BGR (ENSCAFG00020024325) #30	B3GALT5 (ENSCAFG00020024324) #31	ENSCAFG00020024323	PCP4 (ENSCAFG00020024321) #32	DSCAM (ENSCAFG00020024318) #33	BACE2 (ENSCAFG00020024310) #34
Dog	MODERN SPECIES	24	CBR1 (ENSCAFG00845027033)	CBR3 (ENSCAFG00845027234)	DOP1B (ENSCAFG00845027299)	MORC3 (ENSCAFG00845027494)	CHAF1B (ENSCAFG00845027567)	CLDN14 (ENSCAFG00845027623)	SIM2 (ENSCAFG00845027660) #9	HLCS (ENSCAFG00845027738) #10	RIPPLY3 (ENSCAFG00845027840) #12	ENSCAFG00845027926 #13	TTC3 (ENSCAFG00845028091) #14	VPS26C (ENSCAFG00845028583) #16	DYRK1A (ENSCAFG00845028759) #17	ENSCAFG00845028884	KCNJ6 (ENSCAFG00845028925) #18	KCNJ15 (ENSCAFG00845028983) #22	ERG (ENSCAFG00845029042) #23	ETS2 (ENSCAFG00845029168) #24	ENSCAFG00845029206	BRWD1 (ENSCAFG00845029268) #26	ENSCAFG00845029559	HMGN1 (ENSCAFG00845029582) #27	GET1 (ENSCAFG00845029628) #28	LCA5L (ENSCAFG00845029679) #29	SH3BGR (ENSCAFG00845029733) #30	B3GALT5 (ENSCAFG00845029783) #31	IGSF5 (ENSCAFG00845029797)	PCP4 (ENSCAFG00845029822) #32	DSCAM (ENSCAFG00845029877) #33	BACE2 (ENSCAFG00845030032) #34	FAM3B (ENSCAFG00845030073) #35
Red fox	MODERN SPECIES	245																KCNJ15 (ENSVVUG00000024488) #22	ERG (ENSVVUG00000024490) #23	ETS2 (ENSVVUG00000024499) #24	PSMG1 (ENSVVUG00000024504) #25	ENSVVUG00000024512 #26	ENSVVUG00000024600 #26	ENSVVUG00000025852	WRB (ENSVVUG00000025853) #28	LCA5L (ENSVVUG00000025854) #29	SH3BGR (ENSVVUG00000025857) #30	ENSVVUG00000025859	B3GALT5 (ENSVVUG00000025865) #31
Felidae	ANCESTRAL SPECIES	9	ENSGT00510000046499.`c.a.g.b.e.a.a	ENSGT00510000046499.`c.a.g.b.e.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.o.b #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37
Panthera	ANCESTRAL SPECIES	17	ENSGT00510000046499.`c.a.g.b.e.a.a	ENSGT00510000046499.`c.a.g.b.e.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.o.b #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.bb #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37	ENSGT00940000155207.a.b
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00510000046499.`c.a.g.b.e.a.a	ENSGT00510000046499.`c.a.g.b.e.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.o.b #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686 #37	ENSGT00940000155207.a.b
leopard	MODERN SPECIES	81	CBR3 (ENSPPRG00000009031)	DOP1B (ENSPPRG00000008905)	MORC3 (ENSPPRG00000008818)	CHAF1B (ENSPPRG00000008804)	CLDN14 (ENSPPRG00000019999)	SIM2 (ENSPPRG00000008583) #9	HLCS (ENSPPRG00000008534) #10	RIPPLY3 (ENSPPRG00000008392) #12	ENSPPRG00000008374 #13	ENSPPRG00000008294 #14	ENSPPRG00000007946 #14	ENSPPRG00000007596 #14	VPS26C (ENSPPRG00000007535) #16	DYRK1A (ENSPPRG00000007385) #17	KCNJ6 (ENSPPRG00000006638) #18	KCNJ15 (ENSPPRG00000019894) #22	ERG (ENSPPRG00000006437) #23	ETS2 (ENSPPRG00000006275) #24	PSMG1 (ENSPPRG00000006180) #25	HMGN1 (ENSPPRG00000005458) #27	GET1 (ENSPPRG00000005407) #28	LCA5L (ENSPPRG00000004820) #29	SH3BGR (ENSPPRG00000004726) #30	B3GALT5 (ENSPPRG00000004649) #31	PCP4 (ENSPPRG00000004577) #32	DSCAM (ENSPPRG00000004553) #33	BACE2 (ENSPPRG00000003944) #34	FAM3B (ENSPPRG00000003865) #35	MX1 (ENSPPRG00000003339) #37	TMPRSS2 (ENSPPRG00000002829)
lion	MODERN SPECIES	9	CBR3 (ENSPLOG00000009190)	DOP1B (ENSPLOG00000009227)	MORC3 (ENSPLOG00000009284)	CHAF1B (ENSPLOG00000009389)	CLDN14 (ENSPLOG00000009438)	SIM2 (ENSPLOG00000009477) #9	HLCS (ENSPLOG00000009617) #10	RIPPLY3 (ENSPLOG00000009670) #12	ENSPLOG00000009707 #13	ENSPLOG00000009813 #14	ENSPLOG00000009872 #14	ENSPLOG00000009977 #14	VPS26C (ENSPLOG00000010027) #16	DYRK1A (ENSPLOG00000010164) #17	KCNJ6 (ENSPLOG00000010233) #18	KCNJ15 (ENSPLOG00000010261) #22	ERG (ENSPLOG00000011044) #23	ETS2 (ENSPLOG00000011156) #24	PSMG1 (ENSPLOG00000011266) #25	BRWD1 (ENSPLOG00000011385) #26	GET1 (ENSPLOG00000011476) #28	LCA5L (ENSPLOG00000011547) #29	SH3BGR (ENSPLOG00000011642) #30	B3GALT5 (ENSPLOG00000011684) #31	PCP4 (ENSPLOG00000011697) #32	DSCAM (ENSPLOG00000011858) #33	BACE2 (ENSPLOG00000012363) #34	FAM3B (ENSPLOG00000012689) #35	MX1 (ENSPLOG00000012833) #37	TMPRSS2 (ENSPLOG00000013265)	ENSPLOG00000013356
Tiger	MODERN SPECIES	321	CBR3 (ENSPTIG00000003800)	DOP1B (ENSPTIG00000005131)	MORC3 (ENSPTIG00000007503)	CHAF1B (ENSPTIG00000009098)	ENSPTIG00000005477	SIM2 (ENSPTIG00000010539) #9	HLCS (ENSPTIG00000011329) #10	RIPPLY3 (ENSPTIG00000012747) #12	PIGP (ENSPTIG00000012877) #13	ENSPTIG00000014304 #14	ENSPTIG00000015431 #14	ENSPTIG00000016074 #14	VPS26C (ENSPTIG00000016242) #16	DYRK1A (ENSPTIG00000017042) #17	KCNJ6 (ENSPTIG00000018401) #18	KCNJ15 (ENSPTIG00000018526) #22	ERG (ENSPTIG00000019250) #23	ETS2 (ENSPTIG00000021524) #24	PSMG1 (ENSPTIG00000021655) #25	BRWD1 (ENSPTIG00000021862) #26	HMGN1 (ENSPTIG00000009429) #27	GET1 (ENSPTIG00000009749) #28	LCA5L (ENSPTIG00000010441) #29	SH3BGR (ENSPTIG00000011349) #30	B3GALT5 (ENSPTIG00000012211) #31	PCP4 (ENSPTIG00000012652) #32	DSCAM (ENSPTIG00000012935) #33	BACE2 (ENSPTIG00000015773) #34	FAM3B (ENSPTIG00000016871) #35	MX1 (ENSPTIG00000017829) #37	TMPRSS2 (ENSPTIG00000018133)
Cat	MODERN SPECIES	240	CBR3 (ENSFCAG00000035695)	DOP1B (ENSFCAG00000002935)	MORC3 (ENSFCAG00000002940)	CHAF1B (ENSFCAG00000002941)	CLDN14 (ENSFCAG00000002942)	SIM2 (ENSFCAG00000023063) #9	HLCS (ENSFCAG00000002943) #10	RIPPLY3 (ENSFCAG00000043170) #12	ENSFCAG00000038780 #13	ENSFCAG00000043461 #14	ENSFCAG00000023776 #14	ENSFCAG00000044240 #14	VPS26C (ENSFCAG00000012830) #16	DYRK1A (ENSFCAG00000024560) #17	KCNJ6 (ENSFCAG00000005152) #18	KCNJ15 (ENSFCAG00000025648) #22	ERG (ENSFCAG00000007485) #23	ETS2 (ENSFCAG00000007489) #24	ENSFCAG00000053464	PSMG1 (ENSFCAG00000038855) #25	BRWD1 (ENSFCAG00000031344) #26	ENSFCAG00000046512 #27	GET1 (ENSFCAG00000042925) #28	LCA5L (ENSFCAG00000008508) #29	SH3BGR (ENSFCAG00000004671) #30	B3GALT5 (ENSFCAG00000004673) #31	IGSF5 (ENSFCAG00000004674)	PCP4 (ENSFCAG00000035623) #32	DSCAM (ENSFCAG00000008209) #33	BACE2 (ENSFCAG00000001969) #34	FAM3B (ENSFCAG00000001970) #35
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.h	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Equus	ANCESTRAL SPECIES	42	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.h.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Donkey	MODERN SPECIES	9	ENSEASG00005006123	CBR3 (ENSEASG00005006117)	DOP1B (ENSEASG00005006113)	MORC3 (ENSEASG00005006105)	CHAF1B (ENSEASG00005006101)	CLDN14 (ENSEASG00005006099)	SIM2 (ENSEASG00005006092) #9	HLCS (ENSEASG00005006090) #10	RIPPLY3 (ENSEASG00005033801) #12	ENSEASG00005025788 #13	ENSEASG00005006084 #14	ENSEASG00005032100 #14	VPS26C (ENSEASG00005006082) #16	DYRK1A (ENSEASG00005006080) #17	KCNJ6 (ENSEASG00005006078) #18	KCNJ15 (ENSEASG00005025006) #22	ERG (ENSEASG00005006076) #23	ETS2 (ENSEASG00005006072) #24	PSMG1 (ENSEASG00005006069) #25	BRWD1 (ENSEASG00005006066) #26	HMGN1 (ENSEASG00005036575) #27	GET1 (ENSEASG00005027299) #28	LCA5L (ENSEASG00005006060) #29	SH3BGR (ENSEASG00005006056) #30	B3GALT5 (ENSEASG00005032992) #31	ENSEASG00005006052	PCP4 (ENSEASG00005028031) #32	DSCAM (ENSEASG00005006046) #33	BACE2 (ENSEASG00005006036) #34	FAM3B (ENSEASG00005029773) #35	MX2 (ENSEASG00005004002) #36
Horse	MODERN SPECIES	18	DOP1B (ENSECAG00000022735)	MORC3 (ENSECAG00000015098)	CHAF1B (ENSECAG00000056354)	CLDN14 (ENSECAG00000004403)	SIM2 (ENSECAG00000016631) #9	HLCS (ENSECAG00000012050) #10	RIPPLY3 (ENSECAG00000018917) #12	PIGP (ENSECAG00000019349) #13	TTC3 (ENSECAG00000019685) #14	ENSECAG00000003520	ENSECAG00000049180	ENSECAG00000059353 #14	VPS26C (ENSECAG00000023577) #16	DYRK1A (ENSECAG00000024965) #17	KCNJ6 (ENSECAG00000004703) #18	KCNJ15 (ENSECAG00000008811) #22	ERG (ENSECAG00000010667) #23	ETS2 (ENSECAG00000021269) #24	PSMG1 (ENSECAG00000060286) #25	BRWD1 (ENSECAG00000022262) #26	ENSECAG00000059753 #27	GET1 (ENSECAG00000007859) #28	LCA5L (ENSECAG00000008618) #29	SH3BGR (ENSECAG00000010747) #30	B3GALT5 (ENSECAG00000004805) #31	IGSF5 (ENSECAG00000012049)	PCP4 (ENSECAG00000012551) #32	DSCAM (ENSECAG00000012936) #33	BACE2 (ENSECAG00000005305) #34	FAM3B (ENSECAG00000043951) #35	MX2 (ENSECAG00000049815) #36
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.h	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36	ENSGT00940000155686 #37
Megabat	MODERN SPECIES	7455																KCNJ15 (ENSPVAG00000012847) #22
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.h	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36	ENSGT00940000155686 #37
Microbat	MODERN SPECIES	1309																KCNJ15 (ENSMLUG00000002815) #22	ERG (ENSMLUG00000009355) #23	ETS2 (ENSMLUG00000009370) #24	PSMG1 (ENSMLUG00000006122) #25	BRWD1 (ENSMLUG00000006128) #26	GET1 (ENSMLUG00000001064) #28	LCA5L (ENSMLUG00000013494) #29	ENSMLUG00000013499 #30
Greater horseshoe bat	MODERN SPECIES	11	ENSRFEG00010002528	CBR1 (ENSRFEG00010002545)	ENSRFEG00010002568	ENSRFEG00010002587	MORC3 (ENSRFEG00010002615)	CHAF1B (ENSRFEG00010002654)	CLDN14 (ENSRFEG00010002684)	SIM2 (ENSRFEG00010002703) #9	HLCS (ENSRFEG00010002742) #10	ENSRFEG00010002789 #12	PIGP (ENSRFEG00010002809) #13	TTC3 (ENSRFEG00010002881) #14	VPS26C (ENSRFEG00010002992) #16	DYRK1A (ENSRFEG00010003073) #17	KCNJ6 (ENSRFEG00010003110) #18	KCNJ15 (ENSRFEG00010003123) #22	ERG (ENSRFEG00010003217) #23	ETS2 (ENSRFEG00010003341) #24	ENSRFEG00010003371	PSMG1 (ENSRFEG00010003385) #25	ENSRFEG00010003400	BRWD1 (ENSRFEG00010003441) #26	ENSRFEG00010003531	ENSRFEG00010003567 #27	GET1 (ENSRFEG00010003643) #28	ENSRFEG00010003681 #29	ENSRFEG00010003692 #29	SH3BGR (ENSRFEG00010003716) #30	B3GALT5 (ENSRFEG00010003750) #31	ENSRFEG00010003825	PCP4 (ENSRFEG00010003849) #32
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.b #27	ENSGT00950000182802.A.ab.a.a.a.a.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Suina	ANCESTRAL SPECIES	35	ENSGT00510000046499.`c.a.b	ENSGT00510000046499.`c.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.b.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Pig	MODERN SPECIES	4	ENSSSCG00000052860	ENSSSCG00000057140	ENSSSCG00000035405	CBR3 (ENSSSCG00000012053)	DOP1B (ENSSSCG00000012054)	MORC3 (ENSSSCG00000012055)	CHAF1B (ENSSSCG00000012056)	CLDN14 (ENSSSCG00000020680)	SIM2 (ENSSSCG00000027179) #9	HLCS (ENSSSCG00000012059) #10	PIGP (ENSSSCG00000012061) #13	TTC3 (ENSSSCG00000012062) #14	VPS26C (ENSSSCG00000012063) #16	DYRK1A (ENSSSCG00000030480) #17	KCNJ6 (ENSSSCG00000012065) #18	KCNJ15 (ENSSSCG00000012066) #22	ERG (ENSSSCG00000022318) #23	ETS2 (ENSSSCG00000038948) #24	PSMG1 (ENSSSCG00000062206) #25	BRWD1 (ENSSSCG00000021042) #26	ENSSSCG00000033733 #27	ENSSSCG00000051671	GET1 (ENSSSCG00000037381) #28	LCA5L (ENSSSCG00000028122) #29	SH3BGR (ENSSSCG00000029219) #30	ENSSSCG00000050754	ENSSSCG00000038056 #31	ENSSSCG00000012071	PCP4 (ENSSSCG00000037110) #32	DSCAM (ENSSSCG00000012072) #33	ENSSSCG00000012074 #34
Chacoan peccary	MODERN SPECIES	99	ENSCWAG00000003319	ENSCWAG00000003327	CBR3 (ENSCWAG00000003335)	DOP1B (ENSCWAG00000007799)	MORC3 (ENSCWAG00000008171)	CHAF1B (ENSCWAG00000008229)	CLDN14 (ENSCWAG00000008352)	SIM2 (ENSCWAG00000008373) #9	HLCS (ENSCWAG00000008482) #10	RIPPLY3 (ENSCWAG00000008511) #12	PIGP (ENSCWAG00000008564) #13	TTC3 (ENSCWAG00000008763) #14	VPS26C (ENSCWAG00000009347) #16	DYRK1A (ENSCWAG00000009765) #17	KCNJ6 (ENSCWAG00000009839) #18	KCNJ15 (ENSCWAG00000009886) #22	ERG (ENSCWAG00000009993) #23	ETS2 (ENSCWAG00000010529) #24	PSMG1 (ENSCWAG00000010601) #25	BRWD1 (ENSCWAG00000010679) #26	ENSCWAG00000010747 #27	ENSCWAG00000010782	ENSCWAG00000010801	ENSCWAG00000010819 #29	SH3BGR (ENSCWAG00000010866) #30	B3GALT5 (ENSCWAG00000010904) #31	ENSCWAG00000010918	PCP4 (ENSCWAG00000010963) #32	DSCAM (ENSCWAG00000011010) #33	BACE2 (ENSCWAG00000011510) #34	FAM3B (ENSCWAG00000011663) #35
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00510000046499.`c.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.b #27	ENSGT00950000182802.A.ab.a.a.a.a.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Camelidae	ANCESTRAL SPECIES		ENSGT00940000153577.A	ENSGT00510000046499.`c.a	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Arabian camel	MODERN SPECIES		ENSCDRG00005003062	ENSCDRG00005003078	CBR3 (ENSCDRG00005003119)	DOP1B (ENSCDRG00005003137)	MORC3 (ENSCDRG00005003156)	CHAF1B (ENSCDRG00005003178)	CLDN14 (ENSCDRG00005003192)	SIM2 (ENSCDRG00005006306) #9	HLCS (ENSCDRG00005006543) #10	RIPPLY3 (ENSCDRG00005006597) #12	ENSCDRG00005006635 #13	TTC3 (ENSCDRG00005006786) #14	VPS26C (ENSCDRG00005006994) #16	DYRK1A (ENSCDRG00005007271) #17	KCNJ6 (ENSCDRG00005007336) #18	KCNJ15 (ENSCDRG00005007361) #22	ERG (ENSCDRG00005007389) #23	ETS2 (ENSCDRG00005007775) #24	PSMG1 (ENSCDRG00005007842) #25	BRWD1 (ENSCDRG00005007896) #26	ENSCDRG00005008049	ENSCDRG00005008082 #27	GET1 (ENSCDRG00005008195) #28	LCA5L (ENSCDRG00005008281) #29	ENSCDRG00005008380 #30	B3GALT5 (ENSCDRG00005008464) #31	ENSCDRG00005008490	PCP4 (ENSCDRG00005008560) #32	DSCAM (ENSCDRG00005008610) #33	BACE2 (ENSCDRG00005008744) #34	FAM3B (ENSCDRG00005008840) #35
Alpaca	MODERN SPECIES	2681															ENSVPAG00000002057	KCNJ15 (ENSVPAG00000002058) #22	ERG (ENSVPAG00000002060) #23	ETS2 (ENSVPAG00000002062) #24
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00510000046499.`c.a.c	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.b.a.b #27	ENSGT00950000182802.A.ab.a.a.a.a.a #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34
Pecora	ANCESTRAL SPECIES	8	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000164180	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C
Percora_a	ANCESTRAL SPECIES	7	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000164180	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C
Bovidae	ANCESTRAL SPECIES	9	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000164180	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C
Bovinae	ANCESTRAL SPECIES	6	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT01050000248068	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C
Bos	ANCESTRAL SPECIES	7	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT01050000248068	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C.e.a
Bos_a	ANCESTRAL SPECIES	5	ENSGT00510000046499.`c.a.d	ENSGT00390000016421.b.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000162990	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C.e.a	ENSGT00950000182908.C.f	ENSGT00940000160808
Domestic yak	MODERN SPECIES		CBR1 (ENSBGRG00000002778)	DOP1B (ENSBGRG00000002831)	MORC3 (ENSBGRG00000002919)	CHAF1B (ENSBGRG00000003046)	CLDN14 (ENSBGRG00000003111)	SIM2 (ENSBGRG00000003120) #9	HLCS (ENSBGRG00000003161) #10	RIPPLY3 (ENSBGRG00000003171) #12	ENSBGRG00000003202 #13	ENSBGRG00000003228 #14	ENSBGRG00000003246 #14	ENSBGRG00000003250 #14	VPS26C (ENSBGRG00000003274) #16	DYRK1A (ENSBGRG00000003329) #17	KCNJ6 (ENSBGRG00000003372) #18	KCNJ15 (ENSBGRG00000003394) #22	ERG (ENSBGRG00000003442) #23	ETS2 (ENSBGRG00000003739) #24	PIK3R4 (ENSBGRG00000003866)	COL6A6 (ENSBGRG00000003893)	COL6A5 (ENSBGRG00000003956)	CAPN7 (ENSBGRG00000004003)	SH3BP5 (ENSBGRG00000004132)	ENSBGRG00000004225	METTL6 (ENSBGRG00000004234)	EAF1 (ENSBGRG00000004328)	COLQ (ENSBGRG00000004392)	HACL1 (ENSBGRG00000004645)	ENSBGRG00000005423	ANKRD28 (ENSBGRG00000005474)	GALNT15 (ENSBGRG00000005716)
Wild yak	MODERN SPECIES	2094																KCNJ15 (ENSBMUG00000005216) #22	ERG (ENSBMUG00000005173) #23	ETS2 (ENSBMUG00000005080) #24
Bos_b	ANCESTRAL SPECIES	5	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.a #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225	ENSGT00940000155619	ENSGT00940000162990	ENSGT00940000163168	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT01050000248068	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C.e.a
Cow	MODERN SPECIES		MGC127133 (ENSBTAG00000030629)	CBR3 (ENSBTAG00000018688)	ENSBTAG00000053201	DOP1B (ENSBTAG00000014306)	MORC3 (ENSBTAG00000011876)	CHAF1B (ENSBTAG00000011880)	CLDN14 (ENSBTAG00000030585)	SIM2 (ENSBTAG00000021447) #9	HLCS (ENSBTAG00000033679) #10	RIPPLY3 (ENSBTAG00000051916) #12	PIGP (ENSBTAG00000055107) #13	TTC3 (ENSBTAG00000008167) #14	VPS26C (ENSBTAG00000004791) #16	DYRK1A (ENSBTAG00000001771) #17	KCNJ6 (ENSBTAG00000037616) #18	KCNJ15 (ENSBTAG00000000973) #22	ERG (ENSBTAG00000011001) #23	ETS2 (ENSBTAG00000009214) #24	PIK3R4 (ENSBTAG00000020787)	COL6A6 (ENSBTAG00000012837)	COL6A5 (ENSBTAG00000049122)	CAPN7 (ENSBTAG00000006479)	SH3BP5 (ENSBTAG00000023377)	ENSBTAG00000030592	METTL6 (ENSBTAG00000023375)	EAF1 (ENSBTAG00000019202)	COLQ (ENSBTAG00000051541)	COLQ (ENSBTAG00000040193)	HACL1 (ENSBTAG00000003718)	BTD (ENSBTAG00000019129)	ANKRD28 (ENSBTAG00000024815)
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005017141	ENSBIXG00005017110	ENSBIXG00005017086	ENSBIXG00005017062	MORC3 (ENSBIXG00005017041)	CHAF1B (ENSBIXG00005017024)	CLDN14 (ENSBIXG00005017009)	SIM2 (ENSBIXG00005006755) #9	HLCS (ENSBIXG00005007330) #10	RIPPLY3 (ENSBIXG00005016856) #12	ENSBIXG00005016827 #13	ENSBIXG00005016748 #14	VPS26C (ENSBIXG00005016599) #16	DYRK1A (ENSBIXG00005016433) #17	KCNJ6 (ENSBIXG00005016298) #18	KCNJ15 (ENSBIXG00005002584) #22	ERG (ENSBIXG00005016083) #23	ETS2 (ENSBIXG00005015911) #24	PIK3R4 (ENSBIXG00005015834)	COL6A6 (ENSBIXG00005002476)	COL6A5 (ENSBIXG00005015760)	ENSBIXG00005002441	CAPN7 (ENSBIXG00005015610)	SH3BP5 (ENSBIXG00005015583)	METTL6 (ENSBIXG00005015538)	EAF1 (ENSBIXG00005002299)	COLQ (ENSBIXG00005006233)	HACL1 (ENSBIXG00005015316)	BTD (ENSBIXG00005015145)	ANKRD28 (ENSBIXG00005014993)	GALNT15 (ENSBIXG00005014657)
American bison	MODERN SPECIES	2975	ENSBBBG00000006958	DOP1B (ENSBBBG00000016914)	MORC3 (ENSBBBG00000016952)	CHAF1B (ENSBBBG00000016994)	CLDN14 (ENSBBBG00000017017)	SIM2 (ENSBBBG00000017045) #9	HLCS (ENSBBBG00000004221) #10	RIPPLY3 (ENSBBBG00000017085) #12	ENSBBBG00000004231 #13	ENSBBBG00000004234 #14	ENSBBBG00000017149 #14	ENSBBBG00000004246 #14	VPS26C (ENSBBBG00000017188) #16	DYRK1A (ENSBBBG00000008301) #17	KCNJ6 (ENSBBBG00000007499) #18	KCNJ15 (ENSBBBG00000017427) #22	ERG (ENSBBBG00000017681) #23	ETS2 (ENSBBBG00000017725) #24
Caprinae	ANCESTRAL SPECIES	8	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771.f.a.b #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000016225.d	ENSGT00940000155619	ENSGT00940000164180	ENSGT00940000162990	ENSGT00940000155892	ENSGT00390000018500.b	ENSGT00940000156679	ENSGT00390000017724.a.a	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a	ENSGT00950000182908.C	ENSGT00940000160808
Goat	MODERN SPECIES		ENSCHIG00000007290	CBR3 (ENSCHIG00000021573)	DOP1B (ENSCHIG00000014635)	MORC3 (ENSCHIG00000023242)	CHAF1B (ENSCHIG00000016231)	CLDN14 (ENSCHIG00000010835)	SIM2 (ENSCHIG00000024392) #9	HLCS (ENSCHIG00000019377) #10	ENSCHIG00000004217 #12	PIGP (ENSCHIG00000002508) #13	TTC3 (ENSCHIG00000017294) #14	VPS26C (ENSCHIG00000022899) #16	DYRK1A (ENSCHIG00000026093) #17	ENSCHIG00000011651	KCNJ6 (ENSCHIG00000023184) #18	KCNJ15 (ENSCHIG00000019214) #22	ERG (ENSCHIG00000011764) #23	ETS2 (ENSCHIG00000015389) #24	ENSCHIG00000025923	COL6A6 (ENSCHIG00000018630)	ENSCHIG00000027271	COL6A5 (ENSCHIG00000010899)	CAPN7 (ENSCHIG00000022356)	SH3BP5 (ENSCHIG00000007654)	METTL6 (ENSCHIG00000021242)	EAF1 (ENSCHIG00000024831)	COLQ (ENSCHIG00000012168)	HACL1 (ENSCHIG00000013034)	BTD (ENSCHIG00000014947)	ANKRD28 (ENSCHIG00000022112)	GALNT15 (ENSCHIG00000012848)
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020014594	ENSOARG00020014679	CBR3 (ENSOARG00020014737)	DOP1B (ENSOARG00020014787)	MORC3 (ENSOARG00020015210)	CHAF1B (ENSOARG00020015283)	CLDN14 (ENSOARG00020015366)	SIM2 (ENSOARG00020015398) #9	ENSOARG00020015653 #12	ENSOARG00020015751	PIGP (ENSOARG00020015790) #13	TTC3 (ENSOARG00020015865) #14	VPS26C (ENSOARG00020016913) #16	DYRK1A (ENSOARG00020017328) #17	KCNJ6 (ENSOARG00020017811) #18	KCNJ15 (ENSOARG00020017911) #22	ERG (ENSOARG00020017961) #23	ETS2 (ENSOARG00020018270) #24	PIK3R4 (ENSOARG00020018400)	COL6A6 (ENSOARG00020018833)	COL6A5 (ENSOARG00020019139)	CAPN7 (ENSOARG00020019235)	SH3BP5 (ENSOARG00020019355)	METTL6 (ENSOARG00020019436)	EAF1 (ENSOARG00020019515)	COLQ (ENSOARG00020019567)	HACL1 (ENSOARG00020020063)	BTD (ENSOARG00020020641)	ENSOARG00020020758	ANKRD28 (ENSOARG00020020797)	ENSOARG00020021433
Siberian musk deer	MODERN SPECIES	1179																KCNJ15 (ENSMMSG00000019718) #22	ERG (ENSMMSG00000019738) #23	ETS2 (ENSMMSG00000019912) #24	PIK3R4 (ENSMMSG00000019999)	COL6A6 (ENSMMSG00000020084)	COL6A5 (ENSMMSG00000020230)	ENSMMSG00000020401	CAPN7 (ENSMMSG00000020429)	SH3BP5 (ENSMMSG00000020492)	METTL6 (ENSMMSG00000020555)	EAF1 (ENSMMSG00000020617)	COLQ (ENSMMSG00000020685)	HACL1 (ENSMMSG00000021383)	BTD (ENSMMSG00000021460)	ANKRD28 (ENSMMSG00000021499)	GALNT15 (ENSMMSG00000021671)
Yarkand deer	MODERN SPECIES	10	DOP1B (ENSCHYG00000023458)	MORC3 (ENSCHYG00000023622)	CHAF1B (ENSCHYG00000023756)	CLDN14 (ENSCHYG00000023819)	ENSCHYG00000023833	SIM2 (ENSCHYG00000023901) #9	HLCS (ENSCHYG00000024055) #10	ENSCHYG00000024121 #12	ENSCHYG00000024148 #13	TTC3 (ENSCHYG00000024217) #14	ENSCHYG00000024348	VPS26C (ENSCHYG00000007798) #16	DYRK1A (ENSCHYG00000008074) #17	KCNJ6 (ENSCHYG00000008127) #18	ENSCHYG00000008174	KCNJ15 (ENSCHYG00000008186) #22	ERG (ENSCHYG00000008261) #23	ETS2 (ENSCHYG00000008759) #24	ENSCHYG00000008930	PIK3R4 (ENSCHYG00000009005)	COL6A6 (ENSCHYG00000009757)	COL6A5 (ENSCHYG00000009969)	ENSCHYG00000010481	CAPN7 (ENSCHYG00000010535)	SH3BP5 (ENSCHYG00000010811)	METTL6 (ENSCHYG00000010912)	EAF1 (ENSCHYG00000011048)	ENSCHYG00000011089	COLQ (ENSCHYG00000011149)	HACL1 (ENSCHYG00000011632)	ENSCHYG00000014376
Cetacea	ANCESTRAL SPECIES	10	ENSGT00510000046499.`c.a.c	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00390000005732.h.b	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429.a.a #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00510000046499.`c.a.d	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00390000005732.h.b	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429.a.a #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00510000046499.`c.a.d	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00390000005732.h.b	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429.a.a #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.c #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00510000046499.`c.a.d	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00390000005732.h.b	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429.a.a #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.c #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000183178.b.a.jb.b	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00510000046499.`c.a.d	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00390000005732.h.b	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429.a.a #12	ENSGT00390000013771.c #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b.c #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000183178.b.a.jb.b	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.A.ab.a.a.a.a.a.b #27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Narwhal	MODERN SPECIES	297	CBR1 (ENSMMNG00015000275)	CBR3 (ENSMMNG00015000244)	DOP1B (ENSMMNG00015000157)	MORC3 (ENSMMNG00015004698)	CHAF1B (ENSMMNG00015004691)	ENSMMNG00015004686	CLDN14 (ENSMMNG00015004682)	SIM2 (ENSMMNG00015004676) #9	HLCS (ENSMMNG00015004663) #10	RIPPLY3 (ENSMMNG00015004658) #12	ENSMMNG00015004651 #13	TTC3 (ENSMMNG00015004584) #14	ENSMMNG00015004538 #16	DYRK1A (ENSMMNG00015004461) #17	KCNJ6 (ENSMMNG00015004422) #18	KCNJ15 (ENSMMNG00015004403) #22	ERG (ENSMMNG00015004343) #23	ETS2 (ENSMMNG00015004287) #24	ENSMMNG00015004276	PSMG1 (ENSMMNG00015004262) #25	BRWD1 (ENSMMNG00015004196) #26	ENSMMNG00015004161 #27	GET1 (ENSMMNG00015004133) #28	LCA5L (ENSMMNG00015004108) #29	SH3BGR (ENSMMNG00015004078) #30	B3GALT5 (ENSMMNG00015004063) #31	ENSMMNG00015004044	PCP4 (ENSMMNG00015004028) #32	DSCAM (ENSMMNG00015003949) #33	BACE2 (ENSMMNG00015003863) #34	FAM3B (ENSMMNG00015003809) #35
Beluga whale	MODERN SPECIES	111	SETD4 (ENSDLEG00000020189)	CBR3 (ENSDLEG00000020183)	DOPEY2 (ENSDLEG00000020149)	MORC3 (ENSDLEG00000020136)	CHAF1B (ENSDLEG00000020132)	ENSDLEG00000020128	CLDN14 (ENSDLEG00000020123)	SIM2 (ENSDLEG00000020114) #9	HLCS (ENSDLEG00000020112) #10	RIPPLY3 (ENSDLEG00000020108) #12	ENSDLEG00000020104 #13	TTC3 (ENSDLEG00000020057) #14	ENSDLEG00000020039 #16	DYRK1A (ENSDLEG00000020030) #17	KCNJ6 (ENSDLEG00000020019) #18	KCNJ15 (ENSDLEG00000020013) #22	ERG (ENSDLEG00000019992) #23	ETS2 (ENSDLEG00000019986) #24	ENSDLEG00000019984	PSMG1 (ENSDLEG00000019972) #25	ENSDLEG00000019966 #26	ENSDLEG00000017476 #26	WRB (ENSDLEG00000017158) #28	LCA5L (ENSDLEG00000017127) #29	SH3BGR (ENSDLEG00000017102) #30	B3GALT5 (ENSDLEG00000017088) #31	IGSF5 (ENSDLEG00000017082)	PCP4 (ENSDLEG00000017075) #32	DSCAM (ENSDLEG00000021237) #33	BACE2 (ENSDLEG00000021225) #34	FAM3B (ENSDLEG00000021216) #35
Vaquita	MODERN SPECIES	15	CBR1 (ENSPSNG00000002505)	CBR3 (ENSPSNG00000002524)	DOP1B (ENSPSNG00000002549)	MORC3 (ENSPSNG00000002601)	CHAF1B (ENSPSNG00000002625)	ENSPSNG00000002647	CLDN14 (ENSPSNG00000002661)	SIM2 (ENSPSNG00000002674) #9	HLCS (ENSPSNG00000002751) #10	ENSPSNG00000002780 #12	PIGP (ENSPSNG00000002811) #13	TTC3 (ENSPSNG00000002862) #14	VPS26C (ENSPSNG00000002949) #16	DYRK1A (ENSPSNG00000003052) #17	KCNJ6 (ENSPSNG00000003108) #18	KCNJ15 (ENSPSNG00000003129) #22	ERG (ENSPSNG00000003229) #23	ETS2 (ENSPSNG00000003466) #24	ENSPSNG00000003490	PSMG1 (ENSPSNG00000003503) #25	BRWD1 (ENSPSNG00000003542) #26	ENSPSNG00000003581 #27	GET1 (ENSPSNG00000003633) #28	LCA5L (ENSPSNG00000003698) #29	SH3BGR (ENSPSNG00000003727) #30	B3GALT5 (ENSPSNG00000003756) #31	ENSPSNG00000003781	PCP4 (ENSPSNG00000003804) #32	DSCAM (ENSPSNG00000003835) #33	BACE2 (ENSPSNG00000003936) #34	FAM3B (ENSPSNG00000003986) #35
Dolphin	MODERN SPECIES	6073																KCNJ15 (ENSTTRG00000015356) #22	ERG (ENSTTRG00000015358) #23
Sperm whale	MODERN SPECIES	19	ENSPCTG00005004122	ENSPCTG00005004129	ENSPCTG00005004141	ENSPCTG00005004154	MORC3 (ENSPCTG00005004169)	CHAF1B (ENSPCTG00005004962)	ENSPCTG00005004986	SIM2 (ENSPCTG00005005005) #9	HLCS (ENSPCTG00005005026) #10	RIPPLY3 (ENSPCTG00005005047) #12	ENSPCTG00005005076 #14	ENSPCTG00005005156 #14	VPS26C (ENSPCTG00005005269) #16	DYRK1A (ENSPCTG00005005555) #17	KCNJ6 (ENSPCTG00005005642) #18	KCNJ15 (ENSPCTG00005005683) #22	ENSPCTG00005005745 #23	ENSPCTG00005006052 #23	ETS2 (ENSPCTG00005006070) #24	ENSPCTG00005006121	ENSPCTG00005006137	PSMG1 (ENSPCTG00005006154) #25	BRWD1 (ENSPCTG00005006235) #26	ENSPCTG00005006378	HMGN1 (ENSPCTG00005006397) #27	WRB (ENSPCTG00005006465)	LCA5L (ENSPCTG00005006541) #29	ENSPCTG00005006556 #30	B3GALT5 (ENSPCTG00005006578) #31	ENSPCTG00005006605	PCP4 (ENSPCTG00005006627) #32
Blue whale	MODERN SPECIES	15	DOP1B (ENSBMSG00010004399)	MORC3 (ENSBMSG00010004412)	CHAF1B (ENSBMSG00010004422)	ENSBMSG00010004436	CLDN14 (ENSBMSG00010004447)	ENSBMSG00010004455	SIM2 (ENSBMSG00010004467) #9	HLCS (ENSBMSG00010004479) #10	ENSBMSG00010004502 #12	PIGP (ENSBMSG00010004522) #13	ENSBMSG00010004553 #14	ENSBMSG00010004595 #14	VPS26C (ENSBMSG00010004644) #16	DYRK1A (ENSBMSG00010004717) #17	KCNJ6 (ENSBMSG00010004842) #18	KCNJ15 (ENSBMSG00010004859) #22	ERG (ENSBMSG00010004899) #23	ETS2 (ENSBMSG00010005046) #24	PSMG1 (ENSBMSG00010005067) #25	BRWD1 (ENSBMSG00010005088) #26	ENSBMSG00010005108	ENSBMSG00010005116 #27	GET1 (ENSBMSG00010005140) #28	LCA5L (ENSBMSG00010005153) #29	ENSBMSG00010005171 #30	B3GALT5 (ENSBMSG00010005204) #31	ENSBMSG00010005220	PCP4 (ENSBMSG00010005232) #32	DSCAM (ENSBMSG00010005253) #33	BACE2 (ENSBMSG00010005328) #34	FAM3B (ENSBMSG00010005351) #35
Atlantogenata	ANCESTRAL SPECIES	110	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Xenarthra	ANCESTRAL SPECIES	1630																ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23
Armadillo	MODERN SPECIES	1917															ENSDNOG00000045578	KCNJ15 (ENSDNOG00000015726) #22	ERG (ENSDNOG00000015727) #23
Sloth	MODERN SPECIES	12104																KCNJ15 (ENSCHOG00000002844) #22
Afrotheria	ANCESTRAL SPECIES	144			ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Afrotheria_a	ANCESTRAL SPECIES	147				ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Elephant	MODERN SPECIES	513				CBR3 (ENSLAFG00000017246)	DOP1B (ENSLAFG00000017256)	MORC3 (ENSLAFG00000000689)	CHAF1B (ENSLAFG00000000692)	CLDN14 (ENSLAFG00000000859)	SIM2 (ENSLAFG00000000122) #9	HLCS (ENSLAFG00000000126) #10	PIGP (ENSLAFG00000004145) #13	ENSLAFG00000004146 #14	VPS26C (ENSLAFG00000000818) #16	DYRK1A (ENSLAFG00000000815) #17	KCNJ6 (ENSLAFG00000007238) #18	KCNJ15 (ENSLAFG00000013702) #22	ERG (ENSLAFG00000005455) #23	ETS2 (ENSLAFG00000004469) #24	PSMG1 (ENSLAFG00000015096) #25	BRWD1 (ENSLAFG00000015097) #26	GET1 (ENSLAFG00000008072) #28	LCA5L (ENSLAFG00000012558) #29	ENSLAFG00000027123 #30	ENSLAFG00000005853 #31	ENSLAFG00000026827 #31	ENSLAFG00000005039	PCP4 (ENSLAFG00000017850) #32	DSCAM (ENSLAFG00000005372) #33	BACE2 (ENSLAFG00000027997) #34	FAM3B (ENSLAFG00000005755) #35	ENSLAFG00000016541 #37
Hyrax	MODERN SPECIES	8879																KCNJ15 (ENSPCAG00000005736) #22
Marsupialia	ANCESTRAL SPECIES	23	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000157860	ENSGT00940000159353	ENSGT00390000001844.a.a	ENSGT00390000002429	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00940000156253	ENSGT00940000158923	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.D ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000157860	ENSGT00940000159353	ENSGT00390000001844.a.a	ENSGT00390000002429	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000003873	ENSGT00530000063946.a	ENSGT00940000155551.c	ENSGT00940000156294	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00940000159255	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000154497.A	ENSGT00390000010669	ENSGT01100000263796	ENSGT00940000154497.B
Diprotodontia	ANCESTRAL SPECIES	47	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000157860	ENSGT00940000159353	ENSGT00390000001844.a.a	ENSGT00390000002429	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000003873	ENSGT00530000063946.a	ENSGT00940000155551.c	ENSGT00940000156294	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00940000159255	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000154497.A	ENSGT00390000010669	ENSGT01100000263796	ENSGT00940000154497.B
Diprotodontia_a	ANCESTRAL SPECIES	44	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000157860	ENSGT00940000159353	ENSGT00390000001844.a.a	ENSGT00390000002429	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00390000003873	ENSGT00530000063946.a	ENSGT00940000155551.c	ENSGT00940000156294	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00940000159255	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000154497.A	ENSGT00390000010669	ENSGT01100000263796	ENSGT00940000154497.B
Common wonbat	MODERN SPECIES	1045	ADAMTS5 (ENSVURG00010006423)	N6AMT1 (ENSVURG00010006401)	LTN1 (ENSVURG00010005702)	RWDD2B (ENSVURG00010005635)	USP16 (ENSVURG00010005624)	CCT8 (ENSVURG00010005537)	NCAM2 (ENSVURG00010005455)	TMPRSS15 (ENSVURG00010005266)	CHODL (ENSVURG00010005219)	C21orf91 (ENSVURG00010005203)	PIGP (ENSVURG00010005196) #13	ENSVURG00010005159 #14	VPS26C (ENSVURG00010005140) #16	DYRK1A (ENSVURG00010005101) #17	KCNJ6 (ENSVURG00010005090) #18	KCNJ15 (ENSVURG00010005075) #22	ENSVURG00010005062	ERG (ENSVURG00010005031) #23	ETS2 (ENSVURG00010004972) #24	TRAPPC10 (ENSVURG00010004938)	SCAF4 (ENSVURG00010004913)	ENSVURG00010004902	TIAM1 (ENSVURG00010004803)	ENSVURG00010004777	SETD4 (ENSVURG00010004756)	ENSVURG00010004748	ENSVURG00010004739	RUNX1 (ENSVURG00010004671)	ENSVURG00010004605	RCAN1 (ENSVURG00010004550)	ENSVURG00010004544
koala	MODERN SPECIES	61	N6AMT1 (ENSPCIG00000014183)	LTN1 (ENSPCIG00000014163)	RWDD2B (ENSPCIG00000014158)	USP16 (ENSPCIG00000014149)	CCT8 (ENSPCIG00000014147)	NCAM2 (ENSPCIG00000014144)	TMPRSS15 (ENSPCIG00000010163)	CHODL (ENSPCIG00000010159)	C21orf91 (ENSPCIG00000010157)	PIGP (ENSPCIG00000010155) #13	ENSPCIG00000030735 #14	ENSPCIG00000020079 #14	VPS26C (ENSPCIG00000005411) #16	DYRK1A (ENSPCIG00000022327) #17	KCNJ6 (ENSPCIG00000009713) #18	KCNJ15 (ENSPCIG00000022948) #22	ERG (ENSPCIG00000022944) #23	ETS2 (ENSPCIG00000024682) #24	TRAPPC10 (ENSPCIG00000011933)	SCAF4 (ENSPCIG00000028183)	SOD1 (ENSPCIG00000028182)	TIAM1 (ENSPCIG00000012837)	ENSPCIG00000035108	ENSPCIG00000033544	SETD4 (ENSPCIG00000012833)	ENSPCIG00000012832	ENSPCIG00000012831	ENSPCIG00000012826	ENSPCIG00000031436	RUNX1 (ENSPCIG00000008933)	ENSPCIG00000008934
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000026424	ENSSHAG00000011746	USP16 (ENSSHAG00000011204)	RWDD2B (ENSSHAG00000007796)	ENSSHAG00000011096	ENSSHAG00000009183	TMPRSS15 (ENSSHAG00000005881)	CHODL (ENSSHAG00000005249)	ENSSHAG00000026194	ENSSHAG00000014284 #13	ENSSHAG00000013708 #14	VPS26C (ENSSHAG00000013325) #16	DYRK1A (ENSSHAG00000026536) #17	KCNJ6 (ENSSHAG00000026648) #18	ENSSHAG00000022321	KCNJ15 (ENSSHAG00000022244) #22	ERG (ENSSHAG00000008486) #23	ENSSHAG00000007055 #24	ENSSHAG00000003843	ENSSHAG00000001581	ENSSHAG00000020925	ENSSHAG00000007634	ENSSHAG00000008714	SETD4 (ENSSHAG00000008853)	ENSSHAG00000027118	RUNX1 (ENSSHAG00000014782)	ENSSHAG00000022481	RCAN1 (ENSSHAG00000016384)	KCNE1 (ENSSHAG00000031363)	C21orf140 (ENSSHAG00000016240)	ENSSHAG00000016273
Opossum	MODERN SPECIES	3	N6AMT1 (ENSMODG00000020997)	LTN1 (ENSMODG00000020996)	RWDD2B (ENSMODG00000020995)	ENSMODG00000020994	CCT8 (ENSMODG00000020993)	NCAM2 (ENSMODG00000020992)	TMPRSS15 (ENSMODG00000043290)	CHODL (ENSMODG00000037721)	C21orf91 (ENSMODG00000046101)	PIGP (ENSMODG00000044070) #13	ENSMODG00000047973	ENSMODG00000020986 #14	VPS26C (ENSMODG00000020983) #16	DYRK1A (ENSMODG00000020982) #17	KCNJ6 (ENSMODG00000020981) #18	KCNJ15 (ENSMODG00000025413) #22	ERG (ENSMODG00000020980) #23	ETS2 (ENSMODG00000020979) #24	PSMG1 (ENSMODG00000043453) #25	GRIK1 (ENSMODG00000020977)	ENSMODG00000020976	ENSMODG00000020974	BRWD1 (ENSMODG00000020973) #26	ENSMODG00000020972 ##27	WRB (ENSMODG00000040658)	LCA5L (ENSMODG00000020970) #29	SH3BGR (ENSMODG00000020969) #30	B3GALT5 (ENSMODG00000038204) #31	PCP4 (ENSMODG00000020967) #32	DSCAM (ENSMODG00000020965) #33	BACE2 (ENSMODG00000020963) #34
Platypus	MODERN SPECIES	9	ATP6V0B (ENSOANG00000009009)	DPH2 (ENSOANG00000036793)	IPO13 (ENSOANG00000003204)	ENSOANG00000048084	ST3GAL3 (ENSOANG00000051334)	KDM4A (ENSOANG00000006398)	PTPRF (ENSOANG00000006400)	HYI (ENSOANG00000006406)	ENSOANG00000041345 #12	ENSOANG00000006407 #13	ENSOANG00000040733 #14	ENSOANG00000006408 #14	VPS26C (ENSOANG00000036069) #16	DYRK1A (ENSOANG00000006412) #17	KCNJ6 (ENSOANG00000006415) #18	KCNJ15 (ENSOANG00000006416) #22	ERG (ENSOANG00000006418) #23	ETS2 (ENSOANG00000006420) #24	PSMG1 (ENSOANG00000006421) #25	BRWD1 (ENSOANG00000006422) #26	ENSOANG00000040624 ##27	GET1 (ENSOANG00000049347) #28	SH3BGR (ENSOANG00000040703) #30	ENSOANG00000006428 #31	ENSOANG00000006429	PCP4 (ENSOANG00000035160) #32	DSCAM (ENSOANG00000006430) #33	ENSOANG00000006433 #37	ENSOANG00000006437 #37	TMPRSS2 (ENSOANG00000006438)	RIPK4 (ENSOANG00000006443)
Sauria	ANCESTRAL SPECIES	2	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37
Archelosauria	ANCESTRAL SPECIES		ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Aves	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00940000164489	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947.a	ENSGT00530000064267.a #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Duck	DUPLICATION
Duck	MODERN SPECIES	1944															ENSAPLG00000015517 #18	ENSAPLG00000011759 #22
Duck	MODERN SPECIES		CBR1 (ENSAPLG00000015892)	DOP1B (ENSAPLG00000015059)	MORC3 (ENSAPLG00000014621)	CHAF1B (ENSAPLG00000014150)	CLDN14 (ENSAPLG00000011573)	SIM2 (ENSAPLG00000014050) #9	HLCS (ENSAPLG00000013775) #10	RIPPLY3 (ENSAPLG00000019819) #12	PIGP (ENSAPLG00000022878) #13	ENSAPLG00000019136 #14	ENSAPLG00000028063 #14	ENSAPLG00000012209 #14	VPS26C (ENSAPLG00000011951) #16	DYRK1A (ENSAPLG00000011621) #17	ENSAPLG00000028827 #18	ENSAPLG00000027981 #22	ENSAPLG00000015271 #23	ENSAPLG00000024773 #24	ENSAPLG00000017761	ENSAPLG00000014951 #25	ENSAPLG00000014570 #26	ENSAPLG00000030604 ##27	GET1 (ENSAPLG00000023365) #28	ENSAPLG00000021983 #29	ENSAPLG00000018874 #30	ENSAPLG00000019280 #31	ENSAPLG00000014415	ENSAPLG00000030900 #32	ENSAPLG00000022017 #33	ENSAPLG00000028806 #34	TMEM47 (ENSAPLG00000007982)
Pink-footed goose	MODERN SPECIES	92	CLIC6 (ENSABRG00000005383)	RUNX1 (ENSABRG00000005392)	SETD4 (ENSABRG00000005444)	CBR1 (ENSABRG00000005488)	DOP1B (ENSABRG00000005760)	MORC3 (ENSABRG00000007044)	CHAF1B (ENSABRG00000007176)	CLDN14 (ENSABRG00000007223)	SIM2 (ENSABRG00000007227) #9	HLCS (ENSABRG00000007232) #10	PIGP (ENSABRG00000007271) #13	VPS26C (ENSABRG00000007303) #16	DYRK1A (ENSABRG00000007369) #17	KCNJ6 (ENSABRG00000007507) #18	ENSABRG00000007532	KCNJ15 (ENSABRG00000007567) #22	ERG (ENSABRG00000007601) #23	ETS2 (ENSABRG00000007653) #24	PSMG1 (ENSABRG00000007673) #25	BRWD1 (ENSABRG00000007702) #26	ENSABRG00000007815 ##27	GET1 (ENSABRG00000007894) #28	LCA5L (ENSABRG00000007911) #29	SH3BGR (ENSABRG00000007927) #30	B3GALT5 (ENSABRG00000007941) #31	IGSF5 (ENSABRG00000007955)	PCP4 (ENSABRG00000007977) #32	DSCAM (ENSABRG00000008016) #33	BACE2 (ENSABRG00000008215) #34	FAM3B (ENSABRG00000008237) #35	MX2 (ENSABRG00000008287) #36
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000163266 #36	ENSGT00940000155207.a.b
Japanese quail	MODERN SPECIES		RUNX1 (ENSCJPG00005007547)	SETD4 (ENSCJPG00005007565)	CBR1 (ENSCJPG00005007568)	DOP1B (ENSCJPG00005007582)	MORC3 (ENSCJPG00005007588)	CHAF1B (ENSCJPG00005007599)	CLDN14 (ENSCJPG00005007818)	SIM2 (ENSCJPG00005007820) #9	HLCS (ENSCJPG00005007836) #10	PIGP (ENSCJPG00005007837) #13	TTC3 (ENSCJPG00005007838) #14	VPS26C (ENSCJPG00005007843) #16	DYRK1A (ENSCJPG00005007871) #17	ENSCJPG00005007872	KCNJ6 (ENSCJPG00005007874) #18	KCNJ15 (ENSCJPG00005007938) #22	ERG (ENSCJPG00005007939) #23	ETS2 (ENSCJPG00005007967) #24	PSMG1 (ENSCJPG00005007970) #25	BRWD1 (ENSCJPG00005007977) #26	ENSCJPG00005008183 ##27	GET1 (ENSCJPG00005008185) #28	LCA5L (ENSCJPG00005008251) #29	SH3BGR (ENSCJPG00005008263) #30	B3GALT5 (ENSCJPG00005008266) #31	IGSF5 (ENSCJPG00005008268)	PCP4 (ENSCJPG00005008270) #32	DSCAM (ENSCJPG00005008335) #33	ENSCJPG00005008648	BACE2 (ENSCJPG00005008649) #34	FAM3B (ENSCJPG00005008650) #35
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000164201	ENSGT00940000155207.a.b
Turkey	MODERN SPECIES		ENSMGAG00000014535	CBR1 (ENSMGAG00000014541)	SETD4 (ENSMGAG00000014542)	DOP1B (ENSMGAG00000014540)	CHAF1B (ENSMGAG00000014544)	CLDN14 (ENSMGAG00000014543)	SIM2 (ENSMGAG00000014545) #9	HLCS (ENSMGAG00000014546) #10	RIPPLY3 (ENSMGAG00000019709) #12	PIGP (ENSMGAG00000022533) #13	ENSMGAG00000018948 #14	ENSMGAG00000014549 #14	VPS26C (ENSMGAG00000014550) #16	DYRK1A (ENSMGAG00000014551) #17	KCNJ6 (ENSMGAG00000014552) #18	KCNJ15 (ENSMGAG00000016167) #22	ERG (ENSMGAG00000014553) #23	ETS2 (ENSMGAG00000014554) #24	PSMG1 (ENSMGAG00000014555) #25	BRWD1 (ENSMGAG00000014556) #26	GET1 (ENSMGAG00000014558) #28	LCA5L (ENSMGAG00000014559) #29	SH3BGR (ENSMGAG00000014561) #30	B3GALT5 (ENSMGAG00000022407) #31	IGSF5 (ENSMGAG00000014560)	DSCAM (ENSMGAG00000014563) #33	ENSMGAG00000016169	ENSMGAG00000014569	ENSMGAG00000020084	ENSMGAG00000014568	ENSMGAG00000014566
Chicken	MODERN SPECIES		RUNX1 (ENSGALG00010012917)	SETD4 (ENSGALG00010012925)	CBR3 (ENSGALG00010012964)	DOP1B (ENSGALG00010012993)	MORC4 (ENSGALG00010013037)	CHAF1B (ENSGALG00010013082)	CLDN14 (ENSGALG00010013096)	SIM2 (ENSGALG00010013099) #9	HLCS (ENSGALG00010013104) #10	RIPPLY3 (ENSGALG00010013109) #12	PIGP (ENSGALG00010013114) #13	TTC3 (ENSGALG00010013135) #14	DSCR3 (ENSGALG00010013168) #16	DYRK1A (ENSGALG00010013181) #17	KCNJ6 (ENSGALG00010013205) #18	KCNJ15 (ENSGALG00010013304) #22	ERG (ENSGALG00010013330) #23	ETS2 (ENSGALG00010013349) #24	PSMG1 (ENSGALG00010013375) #25	BRWD1 (ENSGALG00010014738) #26	HMGN1 (ENSGALG00010013391) ##27	WRB (ENSGALG00010013413) #28	LCA5L (ENSGALG00010013449) #29	SH3BGR (ENSGALG00010013457) #30	B3GALT5 (ENSGALG00010013492) #31	IGSF5 (ENSGALG00010013504)	PCP4 (ENSGALG00010013549) #32	DSCAM (ENSGALG00010013589) #33	BACE2 (ENSGALG00010013650) #34	FAM3B (ENSGALG00010013758) #35	ENSGALG00010013778
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Golden eagle	MODERN SPECIES	23	RUNX1 (ENSACCG00020006243)	SETD4 (ENSACCG00020006251)	CBR1 (ENSACCG00020006262)	ENSACCG00020006276	DOP1B (ENSACCG00020006295)	MORC3 (ENSACCG00020006368)	CHAF1B (ENSACCG00020006425)	CLDN14 (ENSACCG00020006442)	SIM2 (ENSACCG00020006453) #9	HLCS (ENSACCG00020006470) #10	PIGP (ENSACCG00020006482) #13	TTC3 (ENSACCG00020006500) #14	VPS26C (ENSACCG00020006549) #16	DYRK1A (ENSACCG00020006581) #17	KCNJ6 (ENSACCG00020006608) #18	KCNJ15 (ENSACCG00020006619) #22	ERG (ENSACCG00020006656) #23	ETS2 (ENSACCG00020006692) #24	PSMG1 (ENSACCG00020006704) #25	BRWD1 (ENSACCG00020006729) #26	ENSACCG00020006775 ##27	GET1 (ENSACCG00020006786) #28	LCA5L (ENSACCG00020006800) #29	SH3BGR (ENSACCG00020006813) #30	B3GALT5 (ENSACCG00020006827) #31	IGSF5 (ENSACCG00020006845)	PCP4 (ENSACCG00020006869) #32	DSCAM (ENSACCG00020007031) #33	BACE2 (ENSACCG00020007183) #34	FAM3B (ENSACCG00020007233) #35	MX1 (ENSACCG00020007248) #37
Kakapo	MODERN SPECIES	11	CBR1 (ENSSHBG00005017687)	DOP1B (ENSSHBG00005017708)	MORC3 (ENSSHBG00005017750)	CHAF1B (ENSSHBG00005017896)	CLDN14 (ENSSHBG00005017898)	SIM2 (ENSSHBG00005017903) #9	HLCS (ENSSHBG00005017906) #10	PIGP (ENSSHBG00005017917) #13	ENSSHBG00005017924 #14	ENSSHBG00005017936	ENSSHBG00005017941 #14	ENSSHBG00005017947 #14	VPS26C (ENSSHBG00005017954) #16	DYRK1A (ENSSHBG00005017956) #17	KCNJ6 (ENSSHBG00005017962) #18	KCNJ15 (ENSSHBG00005017964) #22	ERG (ENSSHBG00005017966) #23	ETS2 (ENSSHBG00005017977) #24	PSMG1 (ENSSHBG00005017979) #25	BRWD1 (ENSSHBG00005018061) #26	ENSSHBG00005019123 ##27	ENSSHBG00005019126	SH3BGR (ENSSHBG00005019130) #30	B3GALT5 (ENSSHBG00005019133) #31	PCP4 (ENSSHBG00005019137) #32	DSCAM (ENSSHBG00005019146) #33	BACE2 (ENSSHBG00005019201) #34	FAM3B (ENSSHBG00005019204) #35	MX1 (ENSSHBG00005019205) #37	TMPRSS2 (ENSSHBG00005019207)	RIPK4 (ENSSHBG00005019208)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000159255.t	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000159255.s	ENSGT00940000159255.t	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000159255.s	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960.e #10	ENSGT00390000002960.f #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00940000159602	ENSGT00940000159255.s	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960.e #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.d #37	ENSGT00940000155207.a.b
Zebra finch	MODERN SPECIES		ENSTGUG00000028584	RUNX1 (ENSTGUG00000026657)	SETD4 (ENSTGUG00000004731)	CBR1 (ENSTGUG00000019381)	DOP1B (ENSTGUG00000004760)	MORC3 (ENSTGUG00000004803)	CHAF1B (ENSTGUG00000004832)	CLDN14 (ENSTGUG00000004853)	SIM2 (ENSTGUG00000004856) #9	HLCS (ENSTGUG00000005220) #10	PIGP (ENSTGUG00000025829) #13	TTC3 (ENSTGUG00000004895) #14	VPS26C (ENSTGUG00000027285) #16	DYRK1A (ENSTGUG00000004960) #17	KCNJ6 (ENSTGUG00000004993) #18	KCNJ15 (ENSTGUG00000004997) #22	ERG (ENSTGUG00000004998) #23	ETS2 (ENSTGUG00000005028) #24	PSMG1 (ENSTGUG00000005059) #25	BRWD1 (ENSTGUG00000005062) #26	HMGN1 (ENSTGUG00000005112) ##27	GET1 (ENSTGUG00000005116) #28	SH3BGR (ENSTGUG00000005133) #30	ENSTGUG00000005124 #29	B3GALT5 (ENSTGUG00000005144) #31	ENSTGUG00000021600	PCP4 (ENSTGUG00000005150) #32	BACE2 (ENSTGUG00000005268) #34	FAM3B (ENSTGUG00000005255) #35	MX1 (ENSTGUG00000005326) #37	TMPRSS2 (ENSTGUG00000005348)
Common canary	MODERN SPECIES	11	PCP4 (ENSSCAG00000010888) #32	IGSF5 (ENSSCAG00000010884)	SETD4 (ENSSCAG00000010875)	CBR1 (ENSSCAG00000010872)	KCNE1 (ENSSCAG00000010868)	RCAN1 (ENSSCAG00000010862)	ENSSCAG00000010856	ENSSCAG00000010846 #10	ENSSCAG00000010840	PIGP (ENSSCAG00000010835) #13	ENSSCAG00000010829 #14	ENSSCAG00000010806 #14	VPS26C (ENSSCAG00000010780) #16	DYRK1A (ENSSCAG00000010775) #17	KCNJ6 (ENSSCAG00000010773) #18	KCNJ15 (ENSSCAG00000010771) #22	ERG (ENSSCAG00000010759) #23	ETS2 (ENSSCAG00000010751) #24	PSMG1 (ENSSCAG00000010748) #25	ENSSCAG00000010735 #26	ENSSCAG00000010730 #26	GET1 (ENSSCAG00000010727) #28	ENSSCAG00000010724 #29	SH3BGR (ENSSCAG00000010721) #30	B3GALT5 (ENSSCAG00000010720) #31	ENSSCAG00000010716	ENSSCAG00000010713	ENSSCAG00000010696 #10	SIM2 (ENSSCAG00000010649) #9	CLDN14 (ENSSCAG00000010639)	CHAF1B (ENSSCAG00000010633)
Medium ground finch	MODERN SPECIES	270																KCNJ15 (ENSGFOG00000013963) #22	ENSGFOG00000013964	ERG (ENSGFOG00000013965) #23	ETS2 (ENSGFOG00000013968) #24	PSMG1 (ENSGFOG00000013970) #25	ENSGFOG00000013974 #26	ENSGFOG00000013978 #26	ENSGFOG00000006602	GET1 (ENSGFOG00000006644) #28	SH3BGR (ENSGFOG00000006653) #30
Flycatcher	MODERN SPECIES		ENSFALG00000028649	SETD4 (ENSFALG00000010408)	CBR1 (ENSFALG00000024508)	DOP1B (ENSFALG00000010414)	MORC3 (ENSFALG00000010420)	CHAF1B (ENSFALG00000010423)	SIM2 (ENSFALG00000005247) #9	HLCS (ENSFALG00000005235) #10	PIGP (ENSFALG00000005214) #13	ENSFALG00000026035	ENSFALG00000023874 #14	ENSFALG00000005183 #14	VPS26C (ENSFALG00000005166) #16	DYRK1A (ENSFALG00000024758) #17	KCNJ6 (ENSFALG00000023707) #18	KCNJ15 (ENSFALG00000025214) #22	ERG (ENSFALG00000005094) #23	ETS2 (ENSFALG00000026706) #24	ENSFALG00000026279	PSMG1 (ENSFALG00000005056) #25	BRWD1 (ENSFALG00000005039) #26	GET1 (ENSFALG00000028042) #28	ENSFALG00000005019 #29	SH3BGR (ENSFALG00000005014) #30	B3GALT5 (ENSFALG00000005008) #31	IGSF5 (ENSFALG00000005004)	PCP4 (ENSFALG00000025034) #32	DSCAM (ENSFALG00000004983) #33	BACE2 (ENSFALG00000029036) #34	FAM3B (ENSFALG00000002111) #35	MX1 (ENSFALG00000002094) #37
Great tit	MODERN SPECIES		ENSPMJG00000009413	SETD4 (ENSPMJG00000009427)	CBR1 (ENSPMJG00000009428)	DOP1B (ENSPMJG00000009429)	MORC3 (ENSPMJG00000009450)	CHAF1B (ENSPMJG00000009451)	CLDN14 (ENSPMJG00000009452)	SIM2 (ENSPMJG00000009456) #9	HLCS (ENSPMJG00000009520) #10	ENSPMJG00000009522 #12	PIGP (ENSPMJG00000009524) #13	TTC3 (ENSPMJG00000009526) #14	VPS26C (ENSPMJG00000009544) #16	DYRK1A (ENSPMJG00000009547) #17	KCNJ6 (ENSPMJG00000009621) #18	KCNJ15 (ENSPMJG00000009690) #22	ERG (ENSPMJG00000009699) #23	ETS2 (ENSPMJG00000009822) #24	PSMG1 (ENSPMJG00000009827) #25	BRWD1 (ENSPMJG00000009831) #26	ENSPMJG00000010236 ##27	GET1 (ENSPMJG00000010237) #28	SH3BGR (ENSPMJG00000010241) #30	B3GALT5 (ENSPMJG00000010307) #31	IGSF5 (ENSPMJG00000010309)	PCP4 (ENSPMJG00000010310) #32	DSCAM (ENSPMJG00000010433) #33	BACE2 (ENSPMJG00000010499) #34	MX1 (ENSPMJG00000010501) #37	TMPRSS2 (ENSPMJG00000010504)	RIPK4 (ENSPMJG00000010510)
African ostrich	MODERN SPECIES	769														DYRK1A (ENSSCUG00000011910) #17	KCNJ6 (ENSSCUG00000011913) #18	KCNJ15 (ENSSCUG00000011919) #22	ERG (ENSSCUG00000011922) #23	ETS2 (ENSSCUG00000011923) #24	PSMG1 (ENSSCUG00000011926) #25	ENSSCUG00000011927 #26	ENSSCUG00000011932 #26	GET1 (ENSSCUG00000011935) #28	LCA5L (ENSSCUG00000011937) #29	SH3BGR (ENSSCUG00000011939) #30	B3GALT5 (ENSSCUG00000011940) #31	ENSSCUG00000011943	PCP4 (ENSSCUG00000011946) #32	DSCAM (ENSSCUG00000011964) #33	BACE2 (ENSSCUG00000012025) #34	FAM3B (ENSSCUG00000012033) #35	MX1 (ENSSCUG00000012037) #37
Australian saltwater crocodile	MODERN SPECIES	27	RCAN1 (ENSCPRG00005015274)	RUNX1 (ENSCPRG00005015282)	SETD4 (ENSCPRG00005015289)	CBR1 (ENSCPRG00005015294)	DOP1B (ENSCPRG00005015322)	MORC3 (ENSCPRG00005015696)	CHAF1B (ENSCPRG00005015702)	CLDN14 (ENSCPRG00005015707)	SIM2 (ENSCPRG00005015715) #9	HLCS (ENSCPRG00005015723) #10	PIGP (ENSCPRG00005015731) #13	ENSCPRG00005015735 #14	VPS26C (ENSCPRG00005015739) #16	DYRK1A (ENSCPRG00005015754) #17	KCNJ6 (ENSCPRG00005015758) #18	KCNJ15 (ENSCPRG00005015763) #22	ERG (ENSCPRG00005015767) #23	ETS2 (ENSCPRG00005015772) #24	PSMG1 (ENSCPRG00005015780) #25	BRWD1 (ENSCPRG00005015859) #26	ENSCPRG00005016019	ENSCPRG00005016020	LCA5L (ENSCPRG00005016022) #29	ENSCPRG00005016025 #30	ENSCPRG00005016026 #30	B3GALT5 (ENSCPRG00005016029) #31	PCP4 (ENSCPRG00005016038) #32	DSCAM (ENSCPRG00005016058) #33	BACE2 (ENSCPRG00005016096) #34	FAM3B (ENSCPRG00005016105) #35	ENSCPRG00005016122 #37
Cryptodira	ANCESTRAL SPECIES		ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Emydidae	ANCESTRAL SPECIES	28	ENSGT00940000159255	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	10	ENSTMTG00000016684	ENSTMTG00000016619	ENSTMTG00000016601	ENSTMTG00000016514	ENSTMTG00000016456	ENSTMTG00000016429	ENSTMTG00000016409	ENSTMTG00000016364 #9	ENSTMTG00000016329 #10	ENSTMTG00000016311 #13	ENSTMTG00000016296 #14	ENSTMTG00000016281 #14	ENSTMTG00000016249 #16	ENSTMTG00000016213 #17	ENSTMTG00000016204 #18	ENSTMTG00000016192 #22	ENSTMTG00000015909 #23	ENSTMTG00000015878 #24	ENSTMTG00000015865 #25	ENSTMTG00000015854	ENSTMTG00000015835 #26	ENSTMTG00000015816 ##27	ENSTMTG00000015810 #28	ENSTMTG00000015795 #29	ENSTMTG00000015787 #30	ENSTMTG00000015776 #32	ENSTMTG00000015467 #33	ENSTMTG00000015422 #34	ENSTMTG00000015411 #35	ENSTMTG00000015076 #37	ENSTMTG00000015041 #37
Three-toed box turtle	MODERN SPECIES	11	ENSTMTG00000022340	ENSTMTG00000022334	ENSTMTG00000022330	ENSTMTG00000022213	ENSTMTG00000022139	ENSTMTG00000022128	ENSTMTG00000022125	ENSTMTG00000022119 #9	ENSTMTG00000022111 #10	ENSTMTG00000022101 #13	ENSTMTG00000022098 #14	ENSTMTG00000022091 #14	ENSTMTG00000022082 #16	ENSTMTG00000022077 #17	ENSTMTG00000022076 #18	ENSTMTG00000022073 #22	ENSTMTG00000022067 #23	ENSTMTG00000022062 #24	ENSTMTG00000022059 #25	ENSTMTG00000021797 #26	ENSTMTG00000021738 #28	ENSTMTG00000021734 #29	ENSTMTG00000021729 #30	ENSTMTG00000021726 #32	ENSTMTG00000021646 #33	ENSTMTG00000021626 #34	ENSTMTG00000021619 #35	ENSTMTG00000021585 #37	ENSTMTG00000021576 #37	ENSTMTG00000021573 #37	ENSTMTG00000021559
painted turtle	MODERN SPECIES	2389														DYRK1A (ENSCPBG00000012395) #17	KCNJ6 (ENSCPBG00000012397) #18	KCNJ15 (ENSCPBG00000012399) #22	ERG (ENSCPBG00000012403) #23	ETS2 (ENSCPBG00000012415) #24	PSMG1 (ENSCPBG00000012418) #25	BRWD1 (ENSCPBG00000012420) #26	ENSCPBG00000012425	GET1 (ENSCPBG00000012428) #28	LCA5L (ENSCPBG00000012429) #29	SH3BGR (ENSCPBG00000012430) #30	B3GALT5 (ENSCPBG00000012433) #31	IGSF5 (ENSCPBG00000012436)	PCP4 (ENSCPBG00000012442) #32	DSCAM (ENSCPBG00000012456) #33	BACE2 (ENSCPBG00000012845) #34	FAM3B (ENSCPBG00000012846) #35	ENSCPBG00000012848 #37
Testudinidae	ANCESTRAL SPECIES		ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c.f #37	ENSGT00940000155686.c.e #37	ENSGT00940000155686.d.b #37	ENSGT00940000155686.d.a #37
Abingdon island giant tortoise	MODERN SPECIES	1147																KCNJ15 (ENSCABG00000012919) #22	ERG (ENSCABG00000012926) #23
Goode s thornscrub tortoise	MODERN SPECIES		RUNX1 (ENSGEVG00005003432)	SETD4 (ENSGEVG00005003420)	CBR1 (ENSGEVG00005003410)	DOP1B (ENSGEVG00005003352)	MORC3 (ENSGEVG00005003292)	CHAF1B (ENSGEVG00005003264)	CLDN14 (ENSGEVG00005003252)	SIM2 (ENSGEVG00005003239) #9	HLCS (ENSGEVG00005003229) #10	ENSGEVG00005003219 #12	PIGP (ENSGEVG00005003209) #13	TTC3 (ENSGEVG00005003139) #14	VPS26C (ENSGEVG00005003088) #16	DYRK1A (ENSGEVG00005003065) #17	KCNJ6 (ENSGEVG00005003053) #18	KCNJ15 (ENSGEVG00005003045) #22	ERG (ENSGEVG00005002947) #23	ETS2 (ENSGEVG00005002886) #24	PSMG1 (ENSGEVG00005002870) #25	BRWD1 (ENSGEVG00005002258) #26	GET1 (ENSGEVG00005001943) #28	LCA5L (ENSGEVG00005001928) #29	SH3BGR (ENSGEVG00005001914) #30	B3GALT5 (ENSGEVG00005001907) #31	PCP4 (ENSGEVG00005001894) #32	DSCAM (ENSGEVG00005001860) #33	BACE2 (ENSGEVG00005001818) #34	FAM3B (ENSGEVG00005001801) #35	ENSGEVG00005001700 #37	ENSGEVG00005001600 #37	ENSGEVG00005001562 #37
Chinese turtle	MODERN SPECIES	174																KCNJ15 (ENSPSIG00000009303) #22	ERG (ENSPSIG00000008476) #23	ETS2 (ENSPSIG00000007985) #24	PSMG1 (ENSPSIG00000007201) #25	BRWD1 (ENSPSIG00000005903) #26	ENSPSIG00000005890	GET1 (ENSPSIG00000005886) #28	ENSPSIG00000015793 #29	ENSPSIG00000001133	ENSPSIG00000015750 #29	SH3BGR (ENSPSIG00000015636) #30	ENSPSIG00000015622 #31
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00940000159255	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000159255	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964.c #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37	ENSGT00940000164201	ENSGT00940000155686.d #37
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000159255	ENSGT00990000212550	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964.c #31	ENSGT00940000160964.d #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.e #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00940000165905	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964.c #31	ENSGT00940000160964.d #31	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c.a #37	ENSGT00940000155207.a.b	ENSGT00940000159908
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.e #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00950000182802.D ##27	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.e #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000185720	ENSGT00950000183107.a.b.a #26	ENSGT00940000165905	ENSGT00560000077266.b #29
Eastern brown snake	MODERN SPECIES	14	CBR1 (ENSPTXG00000000339)	DOP1B (ENSPTXG00000000252)	MORC3 (ENSPTXG00000000231)	CHAF1B (ENSPTXG00000000200)	ENSPTXG00000000176	ENSPTXG00000000168	SIM2 (ENSPTXG00000000149) #9	HLCS (ENSPTXG00000000119) #10	PIGP (ENSPTXG00000000100) #13	ENSPTXG00000000065 #14	ENSPTXG00000012354 #14	VPS26C (ENSPTXG00000012353) #16	ENSPTXG00000012351	DYRK1A (ENSPTXG00000012350) #17	KCNJ6 (ENSPTXG00000012349) #18	KCNJ15 (ENSPTXG00000012347) #22	ERG (ENSPTXG00000012344) #23	ETS2 (ENSPTXG00000012342) #24	BRWD1 (ENSPTXG00000005904) #26	ENSPTXG00000005903 ##27	ENSPTXG00000005902	ENSPTXG00000005901 #29
Mainland tiger snake	MODERN SPECIES	7	RUNX1 (ENSNSUG00000017781)	SETD4 (ENSNSUG00000017783)	CBR1 (ENSNSUG00000017784)	ENSNSUG00000017785	ENSNSUG00000017786	MORC3 (ENSNSUG00000017787)	CHAF1B (ENSNSUG00000017788)	CLDN14 (ENSNSUG00000017790)	SIM2 (ENSNSUG00000017806) #9	HLCS (ENSNSUG00000017807) #10	PIGP (ENSNSUG00000017820) #13	ENSNSUG00000017821 #14	VPS26C (ENSNSUG00000017824) #16	DYRK1A (ENSNSUG00000017825) #17	KCNJ6 (ENSNSUG00000017826) #18	KCNJ15 (ENSNSUG00000017828) #22	ERG (ENSNSUG00000017833) #23	ETS2 (ENSNSUG00000017856) #24	ENSNSUG00000017857	BRWD1 (ENSNSUG00000017858) #26	ENSNSUG00000017859 ##27	ENSNSUG00000017860	ENSNSUG00000017861 #29
Blue-lipped sea krait	MODERN SPECIES	17																KCNJ15 (ENSLLTG00000000622) #22	ERG (ENSLLTG00000000638) #23
Indian cobra	MODERN SPECIES	4	SETD4 (ENSNNAG00000005083)	CBR1 (ENSNNAG00000005065)	ENSNNAG00000005054	ENSNNAG00000004999	MORC3 (ENSNNAG00000004969)	CHAF1B (ENSNNAG00000004860)	CLDN14 (ENSNNAG00000004849)	SIM2 (ENSNNAG00000004801) #9	HLCS (ENSNNAG00000004191) #10	ENSNNAG00000004128	PIGP (ENSNNAG00000004114) #13	ENSNNAG00000015490 #14	VPS26C (ENSNNAG00000015478) #16	DYRK1A (ENSNNAG00000015401) #17	KCNJ6 (ENSNNAG00000015386) #18	KCNJ15 (ENSNNAG00000015348) #22	ERG (ENSNNAG00000015103) #23	ETS2 (ENSNNAG00000015067) #24	ENSNNAG00000015057	ENSNNAG00000015024 #26	ENSNNAG00000015010 #26	ENSNNAG00000014992 ##27	GET1 (ENSNNAG00000014983) #28	LCA5L (ENSNNAG00000014964) #29	SH3BGR (ENSNNAG00000014946) #30	ENSNNAG00000014931 #31	ENSNNAG00000014920 #31	PCP4 (ENSNNAG00000014905) #32	DSCAM (ENSNNAG00000014616) #33	BACE2 (ENSNNAG00000014576) #34	FAM3B (ENSNNAG00000014550) #35
Lizard	MODERN SPECIES	2	ENSACAG00000012615	CHAF1B (ENSACAG00000012679)	CLDN14 (ENSACAG00000012761)	SIM2 (ENSACAG00000008765) #9	ENSACAG00000035582	ENSACAG00000034650	HLCS (ENSACAG00000008830) #10	PIGP (ENSACAG00000008861) #13	ENSACAG00000027720 #14	ENSACAG00000035690 #14	VPS26C (ENSACAG00000009090) #16	ENSACAG00000039859	DYRK1A (ENSACAG00000009116) #17	KCNJ6 (ENSACAG00000009168) #18	ENSACAG00000041054	KCNJ15 (ENSACAG00000036984) #22	ERG (ENSACAG00000009199) #23	ETS2 (ENSACAG00000009269) #24	ENSACAG00000045094	ENSACAG00000041068	BRWD1 (ENSACAG00000005460) #26	GET1 (ENSACAG00000005451) #28	LCA5L (ENSACAG00000005442) #29	SH3BGR (ENSACAG00000005419) #30	ENSACAG00000037146	ENSACAG00000005416 #31	ENSACAG00000037008 #31	ENSACAG00000005415 #31	ENSACAG00000028616	ENSACAG00000036222	ENSACAG00000042918
Laterata	ANCESTRAL SPECIES		ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.hb	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000160964.c #31	ENSGT00940000163947	ENSGT00940000163238	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.c #37	ENSGT00940000155686.d #37
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000020886	DOP1B (ENSPMRG00000020895)	ENSPMRG00000020916	MORC3 (ENSPMRG00000020919)	CHAF1B (ENSPMRG00000020932)	CLDN14 (ENSPMRG00000020960)	SIM2 (ENSPMRG00000020967) #9	HLCS (ENSPMRG00000020975) #10	ENSPMRG00000020980	PIGP (ENSPMRG00000020985) #13	ENSPMRG00000021012 #14	VPS26C (ENSPMRG00000021026) #16	ENSPMRG00000021032	DYRK1A (ENSPMRG00000021041) #17	KCNJ6 (ENSPMRG00000021055) #18	KCNJ15 (ENSPMRG00000021059) #22	ERG (ENSPMRG00000021074) #23	ETS2 (ENSPMRG00000021097) #24	BRWD1 (ENSPMRG00000021108) #26	GET1 (ENSPMRG00000021140) #28	LCA5L (ENSPMRG00000021152) #29	SH3BGR (ENSPMRG00000021165) #30	B3GALT5 (ENSPMRG00000021171) #31	ENSPMRG00000021172	ENSPMRG00000021180	PCP4 (ENSPMRG00000021191) #32	DSCAM (ENSPMRG00000021325) #33	BACE2 (ENSPMRG00000021807) #34	FAM3B (ENSPMRG00000021816) #35	MX1 (ENSPMRG00000021831) #37	TMPRSS2 (ENSPMRG00000021850)
Argentine black and white tegu	MODERN SPECIES		RUNX1 (ENSSMRG00000023016)	CBR1 (ENSSMRG00000023011)	DOP1B (ENSSMRG00000023010)	SETD4 (ENSSMRG00000023009)	MORC3 (ENSSMRG00000023008)	CHAF1B (ENSSMRG00000023007)	CLDN14 (ENSSMRG00000023006)	SIM2 (ENSSMRG00000023005) #9	HLCS (ENSSMRG00000023004) #10	PIGP (ENSSMRG00000023003) #13	TTC3 (ENSSMRG00000023002) #14	VPS26C (ENSSMRG00000023001) #16	DYRK1A (ENSSMRG00000023000) #17	KCNJ6 (ENSSMRG00000022999) #18	ENSSMRG00000022998	KCNJ15 (ENSSMRG00000022997) #22	ERG (ENSSMRG00000022995) #23	ETS2 (ENSSMRG00000022993) #24	BRWD1 (ENSSMRG00000022992) #26	ENSSMRG00000022983	ENSSMRG00000022982	LCA5L (ENSSMRG00000022981) #29	SH3BGR (ENSSMRG00000022980) #30	ENSSMRG00000022979	B3GALT5 (ENSSMRG00000022978) #31	ENSSMRG00000022977	PCP4 (ENSSMRG00000022976) #32	DSCAM (ENSSMRG00000022942) #33	BACE2 (ENSSMRG00000022940) #34	FAM3B (ENSSMRG00000022939) #35	ENSSMRG00000022938 #37
tuatara	MODERN SPECIES	746	NOTCH2 (ENSSPUG00000000062)	HMGCS2 (ENSSPUG00000000080)	PHGDH (ENSSPUG00000000175)	ENSSPUG00000000396	ENSSPUG00000000416	PRKAB2 (ENSSPUG00000000426)	ENSSPUG00000000433	SIM2 (ENSSPUG00000000454) #9	ENSSPUG00000000498 #10	ENSSPUG00000000519 #10	PIGP (ENSSPUG00000000596) #13	ENSSPUG00000000603 #14	VPS26C (ENSSPUG00000000615) #16	DYRK1A (ENSSPUG00000000621) #17	KCNJ6 (ENSSPUG00000000631) #18	KCNJ15 (ENSSPUG00000000634) #22	ERG (ENSSPUG00000000653) #23	ETS2 (ENSSPUG00000000684) #24
Anura	ANCESTRAL SPECIES	60	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000160495	ENSGT00550000074968	ENSGT00940000161312	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00950000185616	ENSGT00950000182802.D ##27	ENSGT00940000165905	ENSGT00940000159847 #30	ENSGT00940000160964 #31	ENSGT00940000163947	ENSGT01090000260929	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155686.b #37
Frog	MODERN SPECIES	2	morc3.3 (ENSXETG00000039431)	ENSXETG00000040756	ENSXETG00000038435	morc3 (ENSXETG00000013012)	chaf1b (ENSXETG00000013014)	cldn14 (ENSXETG00000013019)	sim2 (ENSXETG00000013022) #9	hlcs (ENSXETG00000013028) #10	ripply3 (ENSXETG00000013030) #12	pigp (ENSXETG00000038791) #13	ttc3 (ENSXETG00000032375) #14	vps26c (ENSXETG00000013035) #16	KCNJ6 (ENSXETG00000049042) #18	dyrk1a (ENSXETG00000013037) #17	ENSXETG00000039779	kcnj15 (ENSXETG00000023556) #22	erg (ENSXETG00000023717) #23	ets2 (ENSXETG00000023724) #24	psmg1 (ENSXETG00000023735) #25	brwd1 (ENSXETG00000023728) #26	ENSXETG00000040818	hmgn1 (ENSXETG00000025097) ##27	get1 (ENSXETG00000023739)	sh3bgr (ENSXETG00000042349) #30	ENSXETG00000047345 #31	b3galt5.2 (ENSXETG00000045829) #31	b3galt5.3 (ENSXETG00000044184) #31	ENSXETG00000042777 #31	b3galt5.4 (ENSXETG00000044775) #31	ENSXETG00000006113 #31	b3galt5l (ENSXETG00000006123) #31
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000007454	ENSLLEG00000007381	DOP1B (ENSLLEG00000007163)	MORC3 (ENSLLEG00000006594)	CHAF1B (ENSLLEG00000006476)	CLDN14 (ENSLLEG00000006458)	SIM2 (ENSLLEG00000006059) #9	HLCS (ENSLLEG00000005886) #10	RIPPLY3 (ENSLLEG00000005842) #12	PIGP (ENSLLEG00000005797) #13	ENSLLEG00000005745	VPS26C (ENSLLEG00000005680) #16	DYRK1A (ENSLLEG00000005534) #17	KCNJ6 (ENSLLEG00000005482) #18	ENSLLEG00000005458	KCNJ15 (ENSLLEG00000005430) #22	ERG (ENSLLEG00000005244) #23	ENSLLEG00000005212	ENSLLEG00000005201	ETS2 (ENSLLEG00000005173) #24	PSMG1 (ENSLLEG00000005143) #25	BRWD1 (ENSLLEG00000005021) #26	ENSLLEG00000004967	ENSLLEG00000004942 ##27	ENSLLEG00000004920	ENSLLEG00000004876	SH3BGR (ENSLLEG00000003820) #30	ENSLLEG00000003815 #31	ENSLLEG00000003809 #31	ENSLLEG00000003795	ENSLLEG00000003788
Coelacanth	MODERN SPECIES	1033																KCNJ15 (ENSLACG00000002317) #22	ERG (ENSLACG00000003340) #23	ETS2 (ENSLACG00000010068) #24	PSMG1 (ENSLACG00000011558) #25	BRWD1 (ENSLACG00000011920) #26	GET1 (ENSLACG00000022345) #28	LCA5L (ENSLACG00000013344) #29	SH3BGR (ENSLACG00000013667) #30	ENSLACG00000013973 #31
Actinopterygii	ANCESTRAL SPECIES	5	ENSGT00940000164443.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00950000183107.a.b.a #26	ENSGT00390000008610.a.b.a.a.b #28	ENSGT00560000077266.b #29	ENSGT00940000159847 #30	ENSGT00940000165615	ENSGT00940000163947	ENSGT00530000064267 #32	ENSGT00940000154678.a.a #33	ENSGT00940000159548 #34	ENSGT00950000183004.a.b.a.b #35	ENSGT00940000155207.a.b	ENSGT00670000098061
Neopterygii	ANCESTRAL SPECIES	54	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408 #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00530000063516.a.a	ENSGT00530000063516.a.b	ENSGT00940000158413	ENSGT00390000012877	ENSGT01030000234582.f.a.b	ENSGT01030000234582.e.b	ENSGT00530000063947.C	ENSGT00940000159975
Osteoglossocephalai	ANCESTRAL SPECIES	7	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00530000063516.a.a.a.a	ENSGT00530000063516.a.b	ENSGT00940000158413	ENSGT00390000012877	ENSGT01030000234582.f.a.b	ENSGT01030000234582.e.b	ENSGT00530000063947.C.d	ENSGT00940000159975
Clupeocephala	ANCESTRAL SPECIES	49	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000157189.c	ENSGT00940000156765.a.b	ENSGT00940000159359	ENSGT01030000234517.F	ENSGT00950000183181.B.b.l.a	ENSGT00940000156649.c.b	ENSGT00940000164937.a.b
Otomorpha	ANCESTRAL SPECIES	25	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000157189.c	ENSGT00940000156765.a.b	ENSGT00390000017608.k.b	ENSGT00940000159359	ENSGT01030000234517.F	ENSGT00950000183181.B.b.l.a	ENSGT00940000156649.c.b
Otophysi	ANCESTRAL SPECIES	70	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00940000180111	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000157189.c	ENSGT00940000156765.a.b	ENSGT00940000159359	ENSGT01030000234517.F	ENSGT00950000183181.B.b.l.a
Characiphysae	ANCESTRAL SPECIES	46	ENSGT00940000158592	ENSGT00940000180111	ENSGT00800000125277.d	ENSGT00800000125277.c	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657
Channel catfish	MODERN SPECIES	7	ENSIPUG00000007746	ENSIPUG00000007789	ENSIPUG00000007885	ENSIPUG00000007900	tiprl (ENSIPUG00000007913)	mina (ENSIPUG00000007936)	ENSIPUG00000007972	sim2 (ENSIPUG00000008018) #9	hlcs (ENSIPUG00000008042) #10	ripply3 (ENSIPUG00000008071) #12	PIGP (ENSIPUG00000008079) #13	ENSIPUG00000008117 #14	vps26c (ENSIPUG00000008327) #16	dyrk1aa (ENSIPUG00000008410) #17	kcnj6 (ENSIPUG00000008432) #18	Kcnj15 (ENSIPUG00000008442) #22	erg (ENSIPUG00000008460) #23	ETS2 (ENSIPUG00000008530)	psmg1 (ENSIPUG00000008576) #25	mpzl1 (ENSIPUG00000008636)	klhl35 (ENSIPUG00000008679)	LRRC32 (ENSIPUG00000008695)	emsy (ENSIPUG00000008712)	ENSIPUG00000008766	ENSIPUG00000008791	wdr45 (ENSIPUG00000008804)	stc (ENSIPUG00000008855)	zcchc9 (ENSIPUG00000008877)	atg10 (ENSIPUG00000008886)	ENSIPUG00000008898	tmem167a (ENSIPUG00000008918)
Characiphysae_b	ANCESTRAL SPECIES	19	ENSGT00940000158592	ENSGT00800000125277.d	ENSGT00940000180111	ENSGT00800000125277.c	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000155956.c	ENSGT00450000040326	ENSGT00940000166267.b.a	ENSGT00940000154981.bb.b	ENSGT00940000154174.fb.a	ENSGT01050000244891.B	ENSGT00940000155336.g.b
Characoidei	ANCESTRAL SPECIES	11	ENSGT00940000158592	ENSGT00800000125277.d	ENSGT00940000180111	ENSGT00800000125277.c	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000155956.c	ENSGT00450000040326	ENSGT00940000166267.b.a	ENSGT00940000154981.bb.b	ENSGT00940000154174.fb.a	ENSGT01050000244891.B	ENSGT00940000155336.g.b
Red-bellied piranha	MODERN SPECIES	18	alcama (ENSPNAG00000018660)	CBLB (ENSPNAG00000018530)	BBX (ENSPNAG00000018457)	ENSPNAG00000018442	ENSPNAG00000003525	ENSPNAG00000018391	tiprl (ENSPNAG00000018377)	riox2 (ENSPNAG00000018338)	ENSPNAG00000018308	SIM2 (ENSPNAG00000018297) #9	HLCS (ENSPNAG00000018258) #10	ripply3 (ENSPNAG00000018235) #12	pigp (ENSPNAG00000018225) #13	ENSPNAG00000018205 #14	KCNJ6 (ENSPNAG00000018070) #18	KCNJ15 (ENSPNAG00000018049) #22	erg (ENSPNAG00000018042) #23	ETS2 (ENSPNAG00000017941) #24	psmg1 (ENSPNAG00000017877) #25	mpzl1l (ENSPNAG00000017863)	KLHL35 (ENSPNAG00000017843)	ENSPNAG00000017835	emsy (ENSPNAG00000017816)	NHLRC3 (ENSPNAG00000017798)	ilk (ENSPNAG00000017788)	timm10b (ENSPNAG00000017701)	mtnr1bb (ENSPNAG00000017693)	FAT3 (ENSPNAG00000003491)	ENSPNAG00000017606	kpna7 (ENSPNAG00000017566)	TYR (ENSPNAG00000017526)
Mexicana tetra	MODERN SPECIES	12	BBX (ENSAMXG00000017656)	ENSAMXG00000036098	ENSAMXG00000039297	ENSAMXG00000041458	tiprl (ENSAMXG00000008934)	riox2 (ENSAMXG00000037571)	ENSAMXG00000040837	SIM2 (ENSAMXG00000039957) #9	HLCS (ENSAMXG00000008888) #10	ripply3 (ENSAMXG00000029707) #12	pigp (ENSAMXG00000030804) #13	TTC3 (ENSAMXG00000008866) #14	vps26c (ENSAMXG00000008854) #16	dyrk1aa (ENSAMXG00000008849) #17	KCNJ6 (ENSAMXG00000008848) #18	KCNJ15 (ENSAMXG00000008845) #22	erg (ENSAMXG00000008838) #23	ETS2 (ENSAMXG00000032582) #24	ENSAMXG00000041254	psmg1 (ENSAMXG00000041801) #25	mpzl1l (ENSAMXG00000029433)	KLHL35 (ENSAMXG00000008827)	ENSAMXG00000009270	emsy (ENSAMXG00000008821)	NHLRC3 (ENSAMXG00000008814)	ilk (ENSAMXG00000008797)	timm10b (ENSAMXG00000035994)	mtnr1bb (ENSAMXG00000008783)	FAT3 (ENSAMXG00000008769)	ENSAMXG00000031523	kpna7 (ENSAMXG00000008758)
Electric eel	MODERN SPECIES	272			ENSEEEG00000012584	ENSEEEG00000012583	tiprl (ENSEEEG00000012580)	riox2 (ENSEEEG00000012579)	ENSEEEG00000012578	SIM2 (ENSEEEG00000012576) #9	HLCS (ENSEEEG00000012575) #10	ripply3 (ENSEEEG00000012574) #12	pigp (ENSEEEG00000012573) #13	ENSEEEG00000012572 #14	vps26c (ENSEEEG00000012571) #16	dyrk1aa (ENSEEEG00000012449) #17	KCNJ6 (ENSEEEG00000012448) #18	KCNJ15 (ENSEEEG00000012447) #22	erg (ENSEEEG00000012446) #23	ETS2 (ENSEEEG00000012445) #24	psmg1 (ENSEEEG00000012444) #25	mpzl1l (ENSEEEG00000012443)	KLHL35 (ENSEEEG00000012442)	ENSEEEG00000012441	NHLRC3 (ENSEEEG00000012439)	ilk (ENSEEEG00000012435)	timm10b (ENSEEEG00000012433)	mtnr1bb (ENSEEEG00000012430)	FAT3 (ENSEEEG00000012301)	CHORDC1 (ENSEEEG00000012264)	kpna7 (ENSEEEG00000012262)	TYR (ENSEEEG00000012190)	grm5a (ENSEEEG00000012181)
Cyprinoidei	ANCESTRAL SPECIES	137																ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000167160	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000170277	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000157189.c	ENSGT00940000156765.a.b	ENSGT00940000159359	ENSGT01030000234517.F	ENSGT00950000183181.B.b.l.a	ENSGT00530000063811.B.b	ENSGT00940000158044.b
Cyprininae	ANCESTRAL SPECIES	1147															ENSGT01080000257365.b.a.b.a.a.f.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662.g.b #23
Goldfish	MODERN SPECIES	28	ENSCARG00000041495	ENSCARG00000041474	ENSCARG00000041462	ENSCARG00000041430	vaspa (ENSCARG00000041404)	ENSCARG00000041255	emsy (ENSCARG00000041238)	ENSCARG00000041198 #10	ENSCARG00000041179 #9	ENSCARG00000041116	tiprl (ENSCARG00000041090)	HLCS (ENSCARG00000041072) #10	dyrk1aa (ENSCARG00000040952) #17	ENSCARG00000040934	KCNJ6 (ENSCARG00000040905) #18	KCNJ15 (ENSCARG00000040897) #22	erg (ENSCARG00000040878) #23	BMP10 (ENSCARG00000040845)	npffr1l3 (ENSCARG00000040833)	ENSCARG00000040828	smad4a (ENSCARG00000040718)	rfx3 (ENSCARG00000040635)	glis3 (ENSCARG00000040610)	ENSCARG00000040600	ENSCARG00000040324	wu:fb59d01 (ENSCARG00000040302)	ENSCARG00000040264	ENSCARG00000040249	ENSCARG00000040007	ENSCARG00000036543	tdgf1 (ENSCARG00000036444)
Cyprininae_a	ANCESTRAL SPECIES	840															ENSGT01080000257365.b.a.b.a.a.f.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662.g.b #23
Common carp reference	MODERN SPECIES	32									ENSCCRG00000048138	ENSCCRG00000031698 #14	dyrk1aa (ENSCCRG00000008212) #17	ENSCCRG00000073723 #9	ripply3 (ENSCCRG00000031695) #12	ENSCCRG00000042405 #18	erg (ENSCCRG00000034863) #23	KCNJ15 (ENSCCRG00000052917) #22	ets2 (ENSCCRG00000048007)	mpzl1l (ENSCCRG00000014154)	ENSCCRG00000014187	ENSCCRG00000018264	emsy (ENSCCRG00000009945)	vaspa (ENSCCRG00000082689)	ENSCCRG00000072512	ENSCCRG00000080391	ENSCCRG00000064876	ENSCCRG00000075108	ENSCCRG00000058451	ENSCCRG00000035795	npffr1l3 (ENSCCRG00000016302)	ENSCCRG00000056292	smad4a (ENSCCRG00000013106)
Golden-line barbel	MODERN SPECIES	1456																KCNJ15 (ENSSGRG00000040843) #22	ENSSGRG00000040842	ENSSGRG00000040841 #23	nppc (ENSSGRG00000040839)	b3gnt7 (ENSSGRG00000040838)	ARMC9 (ENSSGRG00000040675)	polr2h (ENSSGRG00000040670)
Zebrafish	MODERN SPECIES	1							tiprl (ENSDARG00000032353)	riox2 (ENSDARG00000036359)	ENSDARG00000039934 #10	dyrk1aa (ENSDARG00000063570) #17	vps26c (ENSDARG00000075650) #16	ENSDARG00000086075 #14	pigp (ENSDARG00000038805) #13	ripply3 (ENSDARG00000036974) #12	KCNJ6 (ENSDARG00000058985) #18	KCNJ15 (ENSDARG00000058988) #22	erg (ENSDARG00000077304) #23	ets2 (ENSDARG00000103980)	psmg1 (ENSDARG00000040620) #25	mpzl1l (ENSDARG00000059048)	ENSDARG00000063577	ENSDARG00000040621	emsy (ENSDARG00000059059)	NHLRC3 (ENSDARG00000102127)	akt2l (ENSDARG00000103612)	vaspa (ENSDARG00000099690)	ENSDARG00000100197	ENSDARG00000074914	si:ch1073-303d10.1 (ENSDARG00000103006)	FAM222A (ENSDARG00000087585)	ENSDARG00000087910
Clupeiformes	ANCESTRAL SPECIES	163	ENSGT00940000164443.a.a.a	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.b #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008657	ENSGT00940000156765.a.b
Atlantic herring	MODERN SPECIES	24	JAKMIP2 (ENSCHAG00000008691)	alcama (ENSCHAG00000008774)	CBLB (ENSCHAG00000009316)	BBX (ENSCHAG00000009644)	ENSCHAG00000009653	riox2 (ENSCHAG00000009660)	ENSCHAG00000009670	SIM2 (ENSCHAG00000009712) #9	HLCS (ENSCHAG00000009755) #10	pigp (ENSCHAG00000009894) #13	ENSCHAG00000009915 #14	vps26c (ENSCHAG00000010069) #16	KCNJ6 (ENSCHAG00000010166) #18	ENSCHAG00000010192	ENSCHAG00000010248	KCNJ15 (ENSCHAG00000010257) #22	erg (ENSCHAG00000010272) #23	ENSCHAG00000010448	ENSCHAG00000010565	ETS2 (ENSCHAG00000010591) #24	psmg1 (ENSCHAG00000010603) #25	emsy (ENSCHAG00000010628)	ENSCHAG00000010724	vaspa (ENSCHAG00000010755)	NHLRC3 (ENSCHAG00000010837)	ENSCHAG00000010857	ENSCHAG00000010872	NHLRC3 (ENSCHAG00000010902)	mpzl1l (ENSCHAG00000010908)	ENSCHAG00000010917	ENSCHAG00000010951
Denticle herring	MODERN SPECIES	16	KCNK4 (ENSDCDG00000027405)	RD3 (ENSDCDG00000027407)	STX5 (ENSDCDG00000027408)	ENSDCDG00000027412	tiprl (ENSDCDG00000027414)	riox2 (ENSDCDG00000027416)	ENSDCDG00000027418	SIM2 (ENSDCDG00000027420) #9	HLCS (ENSDCDG00000027435) #10	ripply3 (ENSDCDG00000027450) #12	pigp (ENSDCDG00000027451) #13	TTC3 (ENSDCDG00000027458) #14	vps26c (ENSDCDG00000027468) #16	DYRK1A (ENSDCDG00000027478) #17	KCNJ6 (ENSDCDG00000027568) #18	KCNJ15 (ENSDCDG00000027569) #22	erg (ENSDCDG00000027574) #23	ETS2 (ENSDCDG00000027578) #24	psmg1 (ENSDCDG00000027580) #25	mpzl1l (ENSDCDG00000027581)	KLHL35 (ENSDCDG00000013949)	ENSDCDG00000013969	emsy (ENSDCDG00000014034)	NHLRC3 (ENSDCDG00000014103)	vaspa (ENSDCDG00000014129)	ENSDCDG00000014397	coro6 (ENSDCDG00000017359)	ncbp3 (ENSDCDG00000017405)	zgc:152891 (ENSDCDG00000017429)	asl (ENSDCDG00000017466)	ca4c (ENSDCDG00000017905)
Euteleosteomorpha	ANCESTRAL SPECIES	251		ENSGT00940000158592	ENSGT00800000125277	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960.d #10	ENSGT00390000002960.c.a #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25
Acanthomorphata	ANCESTRAL SPECIES	344											ENSGT00390000000083.b	ENSGT00940000159985 #9	ENSGT00390000002960.d #10	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22
Euacanthomorphacea	ANCESTRAL SPECIES	174											ENSGT00390000000083.b	ENSGT00940000159985 #9	ENSGT00390000002960.d #10	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22
Percomorphaceae	ANCESTRAL SPECIES	124										ENSGT01100000263543.d.b	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00950000185259	ENSGT00410000025800
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000154593.a.a.g.a	ENSGT00940000154593.a.a.g.b	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000172841	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00390000012178	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00950000185259	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00390000012905.d	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000154593.a.a.g.b	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000172841	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00390000012178	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00950000185259	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00390000012905.d	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000157328.C	ENSGT00940000159577	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00950000185259	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00390000012905.d	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00950000185259	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000163509.b	ENSGT00940000154593.a.a.h.c.a	ENSGT00940000154593.a.a.h.c.b
Oryzias_b	ANCESTRAL SPECIES	13	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00950000185259	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h.c.a	ENSGT00940000154593.a.a.h.c.b	ENSGT00940000154593.a.a.h.d
Indian medaka	MODERN SPECIES	4	ap2b1 (ENSOMEG00000002625)	mks1 (ENSOMEG00000002644)	zw10 (ENSOMEG00000002657)	ENSOMEG00000002678	tbl2 (ENSOMEG00000002689)	mybbp1a (ENSOMEG00000002701)	ENSOMEG00000000051	ENSOMEG00000002718 #25	ENSOMEG00000000053	slc37a2 (ENSOMEG00000002775)	pou2f3 (ENSOMEG00000002799)	ENSOMEG00000002805	ENSOMEG00000002824	ppm1e (ENSOMEG00000002835)	SMG8 (ENSOMEG00000002847)	KCNJ15 (ENSOMEG00000002852) #22	vps26c (ENSOMEG00000002857) #16	ENSOMEG00000002873 #14	ENSOMEG00000002879	rabgef1 (ENSOMEG00000002888)	KCNJ6 (ENSOMEG00000002894) #18	kctd7 (ENSOMEG00000002906)	pgk1 (ENSOMEG00000002934)	cox7b (ENSOMEG00000000739)	pgrmc1 (ENSOMEG00000002957)	rab24 (ENSOMEG00000002976)	ENSOMEG00000002994	fgfr4 (ENSOMEG00000003036)	ENSOMEG00000003044	znf346 (ENSOMEG00000003054)	zgc:56585 (ENSOMEG00000003062)
Javanese ricefish	MODERN SPECIES	5	HEPACAM (ENSOJAG00000004591)	ap2b1 (ENSOJAG00000004766)	mks1 (ENSOJAG00000005025)	zw10 (ENSOJAG00000005116)	ENSOJAG00000005311	ENSOJAG00000005323	ENSOJAG00000005423	ENSOJAG00000005432 #25	ENSOJAG00000005480	ENSOJAG00000005693	pou2f3 (ENSOJAG00000008034)	TRIM37 (ENSOJAG00000008065)	ppm1e (ENSOJAG00000008124)	ENSOJAG00000008133	SMG8 (ENSOJAG00000008152)	KCNJ15 (ENSOJAG00000008158) #22	vps26c (ENSOJAG00000008163) #16	ENSOJAG00000008235 #14	ENSOJAG00000008391	rabgef1 (ENSOJAG00000008665)	KCNJ6 (ENSOJAG00000008695) #18	kctd7 (ENSOJAG00000008717)	pgk1 (ENSOJAG00000008736)	cox7b (ENSOJAG00000009103)	pgrmc1 (ENSOJAG00000009125)	rab24 (ENSOJAG00000009149)	ENSOJAG00000009192	ENSOJAG00000009910	zgc:56585 (ENSOJAG00000009928)	zgc:56585 (ENSOJAG00000009968)	LARP1 (ENSOJAG00000010017)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000163509.b	ENSGT00510000047299.c
Chinese medaka	MODERN SPECIES	1004	ENSOSIG00000021626	HEPACAM (ENSOSIG00000021637)	ap2b1 (ENSOSIG00000021672)	mks1 (ENSOSIG00000021690)	zw10 (ENSOSIG00000021769)	ENSOSIG00000021824	tbl2 (ENSOSIG00000021829)	mybbp1a (ENSOSIG00000021837)	ENSOSIG00000021842	psmg1 (ENSOSIG00000021847) #25	slc37a2 (ENSOSIG00000021985)	pou2f3 (ENSOSIG00000022576)	TRIM37 (ENSOSIG00000022601)	ppm1e (ENSOSIG00000022620)	SMG8 (ENSOSIG00000022631)	KCNJ15 (ENSOSIG00000022633) #22	vps26c (ENSOSIG00000022639) #16	ENSOSIG00000022642 #14	ENSOSIG00000022647	tuba1a (ENSOSIG00000022661)	rabgef1 (ENSOSIG00000022680)	KCNJ6 (ENSOSIG00000022685) #18	kctd7 (ENSOSIG00000022687)	pgk1 (ENSOSIG00000022715)	ENSOSIG00000022752	pgrmc1 (ENSOSIG00000022754)	rab24 (ENSOSIG00000022756)	ENSOSIG00000022759	fgfr4 (ENSOSIG00000023405)
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000014485	ap2b1 (ENSORLG00000014475)	mks1 (ENSORLG00000014432)	zw10 (ENSORLG00000014405)	ENSORLG00000014376	tbl2 (ENSORLG00000014368)	mybbp1a (ENSORLG00000014339)	ENSORLG00000025339	psmg1 (ENSORLG00000014314) #25	ENSORLG00000014302	slc37a2 (ENSORLG00000014295)	pou2f3 (ENSORLG00000014257)	TRIM37 (ENSORLG00000025211)	ppm1e (ENSORLG00000014237)	SMG8 (ENSORLG00000014233)	KCNJ15 (ENSORLG00000014220) #22	vps26c (ENSORLG00000014211) #16	ENSORLG00000014175 #14	ENSORLG00000023169	ENSORLG00000028803	rabgef1 (ENSORLG00000014114)	KCNJ6 (ENSORLG00000014092) #18	kctd7 (ENSORLG00000025544)	ENSORLG00000027601	pgk1 (ENSORLG00000014063)	ENSORLG00000023765	pgrmc1 (ENSORLG00000014011)	rab24 (ENSORLG00000013997)	ENSORLG00000025209	fgfr4 (ENSORLG00000013964)	znf346 (ENSORLG00000013862)
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00940000157328.C	ENSGT00940000159577	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00940000169096	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206	ENSGT01100000263551.a.a
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000157328.C	ENSGT00940000159577	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00940000169096	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206	ENSGT00940000164327.a
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00940000159577	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00770000121794	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884
Poecilia	ANCESTRAL SPECIES	7	ENSGT00940000159577	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00770000121794	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884
NAME_6	ANCESTRAL SPECIES	408											ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00770000121794	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884
Amazon molly	MODERN SPECIES	1033								KCNJ6 (ENSPFOG00000006037) #18	rabgef1 (ENSPFOG00000006049)	ENSPFOG00000024247	ENSPFOG00000024150	ENSPFOG00000006109 #14	ENSPFOG00000024511	ENSPFOG00000022532 #14	vps26c (ENSPFOG00000006424) #16	KCNJ15 (ENSPFOG00000020768) #22	SMG8 (ENSPFOG00000006556)
Sailfin molly	MODERN SPECIES	2598															vps26c (ENSPLAG00000007357) #16	KCNJ15 (ENSPLAG00000007317) #22
Guppy	MODERN SPECIES	3	faxdc2 (ENSPREG00000005694)	LARP1 (ENSPREG00000005726)	ENSPREG00000005777	znf346 (ENSPREG00000005815)	fgfr4 (ENSPREG00000005849)	ENSPREG00000005935	RAB24 (ENSPREG00000005950)	pgrmc1 (ENSPREG00000005966)	ENSPREG00000005977	pgk1 (ENSPREG00000006004)	kctd7 (ENSPREG00000006056)	KCNJ6 (ENSPREG00000006069) #18	ENSPREG00000006084	rabgef1 (ENSPREG00000006095)	SMG8 (ENSPREG00000006106)	KCNJ15 (ENSPREG00000006123) #22	ppm1e (ENSPREG00000006141)
Platyfish	MODERN SPECIES	2	znf346 (ENSXMAG00000026755)	ENSXMAG00000024510	ENSXMAG00000021935	fgfr4 (ENSXMAG00000018788)	ENSXMAG00000021180	ENSXMAG00000021433	ENSXMAG00000018877	rab24 (ENSXMAG00000018893)	pgrmc1 (ENSXMAG00000018924)	ENSXMAG00000024451	pgk1 (ENSXMAG00000018938)	kctd7 (ENSXMAG00000024238)	KCNJ6 (ENSXMAG00000019733) #18	rabgef1 (ENSXMAG00000006632)	vps26c (ENSXMAG00000002913) #16	KCNJ15 (ENSXMAG00000009041) #22	SMG8 (ENSXMAG00000009027)	ppm1e (ENSXMAG00000028674)	nipal4 (ENSXMAG00000026271)	gria1b (ENSXMAG00000014975)	ENSXMAG00000026647	ncf1 (ENSXMAG00000014979)	st6gal1 (ENSXMAG00000015022)	ENSXMAG00000029638	gjb7 (ENSXMAG00000015041)	ENSXMAG00000015045	ENSXMAG00000015048	ENSXMAG00000027018	zgc:77151 (ENSXMAG00000015652)	DBN1 (ENSXMAG00000015647)	ENSXMAG00000015643
NAME_4	ANCESTRAL SPECIES	12	ENSGT00940000159577.d	ENSGT00940000154593.a.a.h	ENSGT00940000159101	ENSGT00940000165564	ENSGT00940000155027.c.b	ENSGT00910000144316	ENSGT00940000160619	ENSGT00390000012178	ENSGT00940000169781	ENSGT00390000008820.f	ENSGT00940000161327	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000154540.a	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000018533	ENSGT00940000157884	ENSGT00410000025800	ENSGT00940000157627	ENSGT00940000158657	ENSGT00500000044966	ENSGT00500000044950 #25	ENSGT00940000169096	ENSGT00390000017457	ENSGT00390000013836	ENSGT00940000153253.b.a	ENSGT00390000016427	ENSGT00510000047471	ENSGT00940000155206	ENSGT00940000164327.a
Mummichog	MODERN SPECIES	2468	ENSFHEG00000020321	znf346 (ENSFHEG00000020328)	fgfr4 (ENSFHEG00000020422)	ENSFHEG00000020479	rab24 (ENSFHEG00000000609)	pgrmc1 (ENSFHEG00000020510)	pgrmc1 (ENSFHEG00000020516)	ENSFHEG00000020521	pgrmc1 (ENSFHEG00000020543)	pgk1 (ENSFHEG00000020602)	kctd7 (ENSFHEG00000020633)	KCNJ6 (ENSFHEG00000020638) #18	rabgef1 (ENSFHEG00000020649)	ENSFHEG00000020672 #14	vps26c (ENSFHEG00000020717) #16	KCNJ15 (ENSFHEG00000020723) #22	SMG8 (ENSFHEG00000020755)	ppm1e (ENSFHEG00000020757)	TRIM37 (ENSFHEG00000020775)	pou2f3 (ENSFHEG00000020809)	slc37a2 (ENSFHEG00000020900)	ENSFHEG00000020912	ENSFHEG00000020918 #25	ENSFHEG00000020928	mybbp1a (ENSFHEG00000020943)	tbl2 (ENSFHEG00000020963)	ENSFHEG00000020973	zw10 (ENSFHEG00000020984)	ENSFHEG00000021001	mks1 (ENSFHEG00000021260)	ap2b1 (ENSFHEG00000021342)
Sheepshead minnow	MODERN SPECIES	883							ENSCVAG00000005155	rab24 (ENSCVAG00000005169)	pgrmc1 (ENSCVAG00000005199)	cox7b (ENSCVAG00000005215)	pgk1 (ENSCVAG00000005272)	kctd7 (ENSCVAG00000005280)	KCNJ6 (ENSCVAG00000005290) #18	rabgef1 (ENSCVAG00000005312)	vps26c (ENSCVAG00000005343) #16	KCNJ15 (ENSCVAG00000005354) #22	SMG8 (ENSCVAG00000000667)	ppm1e (ENSCVAG00000005378)	TRIM37 (ENSCVAG00000000978)
Aplocheiloidei	ANCESTRAL SPECIES	101					ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00940000169096	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h	ENSGT00940000159577	ENSGT00940000157328.C
Mangrove rivulus	MODERN SPECIES	50	SEC24A (ENSKMAG00000019623)	camlg (ENSKMAG00000019591)	ddx46 (ENSKMAG00000019510)	zgc:77058 (ENSKMAG00000019468)	ENSKMAG00000019446	tbl2 (ENSKMAG00000019419)	ENSKMAG00000019392	ENSKMAG00000019381	psmg1 (ENSKMAG00000019365) #25	ENSKMAG00000019350	slc37a2 (ENSKMAG00000019302)	pou2f3 (ENSKMAG00000019274)	TRIM37 (ENSKMAG00000019240)	ppm1e (ENSKMAG00000019210)	SMG8 (ENSKMAG00000019188)	KCNJ15 (ENSKMAG00000019169) #22	vps26c (ENSKMAG00000019141) #16	ENSKMAG00000018992 #14	rabgef1 (ENSKMAG00000018929)	KCNJ6 (ENSKMAG00000018905) #18	kctd7 (ENSKMAG00000018882)	pgk1 (ENSKMAG00000018847)	cox7b (ENSKMAG00000018830)	pgrmc1 (ENSKMAG00000018815)	rab24 (ENSKMAG00000018779)	ENSKMAG00000018731	ENSKMAG00000018693	fgfr4 (ENSKMAG00000018622)	znf346 (ENSKMAG00000018586)	zgc:56585 (ENSKMAG00000018562)	LARP1 (ENSKMAG00000018468)
Turquoise killifish	MODERN SPECIES	1620	CENPV (ENSNFUG00015006440)	ENSNFUG00015006430	ENSNFUG00015006419	TBL2 (ENSNFUG00015006342)	MYBBP1A (ENSNFUG00015006284)	ENSNFUG00015006265	ENSNFUG00015006264	PSMG1 (ENSNFUG00015006255) #25	CCDC15 (ENSNFUG00015006245)	SLC37A2 (ENSNFUG00015005607)	pou2f3 (ENSNFUG00015005486)	ENSNFUG00015005476	TRIM37 (ENSNFUG00015005434)	PPM1E (ENSNFUG00015005409)	SMG8 (ENSNFUG00015005402)	KCNJ15 (ENSNFUG00015005398) #22	DSCR3 (ENSNFUG00015005374) #16	DZIP3 (ENSNFUG00015005358) #14	ENSNFUG00015005350	ENSNFUG00015005347	ENSNFUG00015005317	ENSNFUG00015005311	ENSNFUG00015005308	GABRQ (ENSNFUG00015005087)	TMLHE (ENSNFUG00015005038)	MPP1 (ENSNFUG00015005016)	VAMP2 (ENSNFUG00015004991)	PCOLCE (ENSNFUG00015004929)	tmem88a (ENSNFUG00015004898)	KDM6BB (ENSNFUG00015004887)	ENSNFUG00015004876
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Pomacentridae	ANCESTRAL SPECIES	57	ENSGT01100000263551.a.a	ENSGT00510000047471	ENSGT00940000155206	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a	ENSGT00940000159577	ENSGT00940000157328.C
Pomacentridae_A	ANCESTRAL SPECIES	85	ENSGT00940000155206	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000154616.b	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a	ENSGT00940000159577	ENSGT00940000157328.C
Amphiprion	ANCESTRAL SPECIES	172	ENSGT01100000263551.a.a	ENSGT00510000047471	ENSGT00940000155206	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564
Clown anemonefish	MODERN SPECIES	2816													ENSAOCG00000019282	ENSAOCG00000001375	SMG8 (ENSAOCG00000019221)	KCNJ15 (ENSAOCG00000019189) #22	vps26c (ENSAOCG00000019180) #16
Orange clownfish	MODERN SPECIES	6	mks1 (ENSAPEG00000021223)	ap2b1 (ENSAPEG00000021276)	zw10 (ENSAPEG00000021393)	ENSAPEG00000021438 ##18	ENSAPEG00000021447	tbl2 (ENSAPEG00000021459)	mybbp1a (ENSAPEG00000021477)	ENSAPEG00000021504	psmg1 (ENSAPEG00000021511) #25	ENSAPEG00000021528	slc37a2 (ENSAPEG00000021560)	pou2f3 (ENSAPEG00000021617)	ENSAPEG00000021641	ppm1e (ENSAPEG00000021664)	SMG8 (ENSAPEG00000021735)	KCNJ15 (ENSAPEG00000021754) #22	vps26c (ENSAPEG00000021759) #16	ENSAPEG00000021771 #14	rabgef1 (ENSAPEG00000021819)	KCNJ6 (ENSAPEG00000021868) #18	kctd7 (ENSAPEG00000021895)	pgk1 (ENSAPEG00000021905)	cox7b (ENSAPEG00000021932)	pgrmc1 (ENSAPEG00000021939)	rab24 (ENSAPEG00000021960)	ENSAPEG00000022004	fgfr4 (ENSAPEG00000022043)	znf346 (ENSAPEG00000022103)	zgc:56585 (ENSAPEG00000022122)	zgc:56585 (ENSAPEG00000022207)	LARP1 (ENSAPEG00000022246)
Spiny chromis	MODERN SPECIES	2961																KCNJ15 (ENSAPOG00000020558) #22	vps26c (ENSAPOG00000020550) #16
Bicolor damselfish	MODERN SPECIES	659	mks1 (ENSSPAG00000022521)	ap2b1 (ENSSPAG00000022491)	zw10 (ENSSPAG00000022475)	ENSSPAG00000022472 ##18	ENSSPAG00000022461	tbl2 (ENSSPAG00000022458)	mybbp1a (ENSSPAG00000022453)	ENSSPAG00000022449	psmg1 (ENSSPAG00000022441) #25	ENSSPAG00000022431	slc37a2 (ENSSPAG00000022406)	pou2f3 (ENSSPAG00000022386)	TRIM37 (ENSSPAG00000022363)	ppm1e (ENSSPAG00000022351)	SMG8 (ENSSPAG00000022345)	ENSSPAG00000022339 #22	vps26c (ENSSPAG00000022322) #16
Cichlidae	ANCESTRAL SPECIES	4	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.h.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.h.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h.a.b	ENSGT00940000154593.a.a.g.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h.a.b	ENSGT00940000154593.a.a.g.b
Burton s mouthbrooder	MODERN SPECIES	323	ap2b1 (ENSHBUG00000019245)	mks1 (ENSHBUG00000019267)	zw10 (ENSHBUG00000019283)	ENSHBUG00000019293 ##18	ENSHBUG00000019299	tbl2 (ENSHBUG00000019311)	mybbp1a (ENSHBUG00000019328)	ENSHBUG00000019340	psmg1 (ENSHBUG00000019379) #25	ENSHBUG00000019384	slc37a2 (ENSHBUG00000019485)	pou2f3 (ENSHBUG00000019553)	TRIM37 (ENSHBUG00000019626)	ppm1e (ENSHBUG00000019641)	SMG8 (ENSHBUG00000019651)	KCNJ15 (ENSHBUG00000019662) #22	vps26c (ENSHBUG00000019698) #16	ENSHBUG00000000584 #14	rabgef1 (ENSHBUG00000019767)	KCNJ6 (ENSHBUG00000019794) #18	kctd7 (ENSHBUG00000019817)	pgk1 (ENSHBUG00000019864)	ENSHBUG00000019883	pgrmc1 (ENSHBUG00000019896)	rab24 (ENSHBUG00000019911)	ENSHBUG00000019925	fgfr4 (ENSHBUG00000020002)	znf346 (ENSHBUG00000020017)	ENSHBUG00000020030	zgc:56585 (ENSHBUG00000020036)	zgc:56585 (ENSHBUG00000020052)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000172841	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h.a.b	ENSGT00940000154593.a.a.g.b
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT01080000257342.G.a.b.d.b.b.b.b.a	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.h.a.b	ENSGT00940000154593.a.a.h.a.a	ENSGT00940000154593.a.a.h.b
Zebra mbuna	MODERN SPECIES	1092	mks1 (ENSMZEG00005010023)	zw10 (ENSMZEG00005010010)	ENSMZEG00005010000 ##18	ENSMZEG00005009987	tbl2 (ENSMZEG00005009976)	ENSMZEG00005009963	ENSMZEG00005009959	ENSMZEG00005009955	psmg1 (ENSMZEG00005009949) #25	ENSMZEG00005009945	slc37a2 (ENSMZEG00005009885)	pou2f3 (ENSMZEG00005009866)	TRIM37 (ENSMZEG00005009850)	ppm1e (ENSMZEG00005009842)	SMG8 (ENSMZEG00005009830)	KCNJ15 (ENSMZEG00005009827) #22	vps26c (ENSMZEG00005009816) #16	ENSMZEG00005009790 #14	rabgef1 (ENSMZEG00005009766)	KCNJ6 (ENSMZEG00005009749) #18	kctd7 (ENSMZEG00005009731)	pgk1 (ENSMZEG00005009698)	ENSMZEG00005009680	pgrmc1 (ENSMZEG00005009668)	rab24 (ENSMZEG00005009622)	ENSMZEG00005009548	fgfr4 (ENSMZEG00005009478)	ENSMZEG00005009455	znf346 (ENSMZEG00005009446)	ENSMZEG00005009436	zgc:56585 (ENSMZEG00005009429)
Eastern happy	MODERN SPECIES	1	mks1 (ENSACLG00000021218)	zw10 (ENSACLG00000021186)	ENSACLG00000021177 ##18	ENSACLG00000021138	tbl2 (ENSACLG00000021118)	ENSACLG00000021108	mybbp1a (ENSACLG00000016878)	ENSACLG00000016739	ENSACLG00000016703 #25	ENSACLG00000016682	slc37a2 (ENSACLG00000016565)	pou2f3 (ENSACLG00000016532)	TRIM37 (ENSACLG00000016442)	ppm1e (ENSACLG00000016422)	SMG8 (ENSACLG00000016396)	KCNJ15 (ENSACLG00000016385) #22	vps26c (ENSACLG00000016356) #16	ENSACLG00000016216 #14	rabgef1 (ENSACLG00000016138)	KCNJ6 (ENSACLG00000016108) #18	kctd7 (ENSACLG00000016087)	pgk1 (ENSACLG00000016012)	ENSACLG00000015986	pgrmc1 (ENSACLG00000015951)	rab24 (ENSACLG00000015924)	ENSACLG00000015768	fgfr4 (ENSACLG00000015658)	znf346 (ENSACLG00000015637)	ENSACLG00000015594	zgc:56585 (ENSACLG00000015566)	ENSACLG00000015552
P. nyererei	MODERN SPECIES	514		ap2b1 (ENSPNYG00000009344)	mks1 (ENSPNYG00000009138)	zw10 (ENSPNYG00000009110)	ENSPNYG00000009077	tbl2 (ENSPNYG00000009058)	mybbp1a (ENSPNYG00000009002)	ENSPNYG00000008989	psmg1 (ENSPNYG00000008960) #25	slc37a2 (ENSPNYG00000008880)	pou2f3 (ENSPNYG00000008767)	ENSPNYG00000008733	TRIM37 (ENSPNYG00000008710)	ppm1e (ENSPNYG00000008696)	SMG8 (ENSPNYG00000008677)	KCNJ15 (ENSPNYG00000008663) #22	vps26c (ENSPNYG00000008637) #16	ENSPNYG00000008555 #14	rabgef1 (ENSPNYG00000008516)	KCNJ6 (ENSPNYG00000008496) #18	kctd7 (ENSPNYG00000008471)	ENSPNYG00000008434	pgk1 (ENSPNYG00000008400)	cox7b (ENSPNYG00000008378)	pgrmc1 (ENSPNYG00000008356)	rab24 (ENSPNYG00000008334)	ENSPNYG00000008305	ENSPNYG00000008272	fgfr4 (ENSPNYG00000008189)	znf346 (ENSPNYG00000008154)	zgc:56585 (ENSPNYG00000008139)
Lyretail cichlid	MODERN SPECIES	297	styxl1 (ENSNBRG00000010624)	HEPACAM (ENSNBRG00000010553)	ap2b1 (ENSNBRG00000010453)	mks1 (ENSNBRG00000010253)	zw10 (ENSNBRG00000010068)	ENSNBRG00000010034 ##18	tbl2 (ENSNBRG00000010024)	mybbp1a (ENSNBRG00000009979)	ENSNBRG00000009966	psmg1 (ENSNBRG00000009960) #25	ENSNBRG00000009924	pou2f3 (ENSNBRG00000009898)	ENSNBRG00000009879	ppm1e (ENSNBRG00000009839)	SMG8 (ENSNBRG00000009823)	KCNJ15 (ENSNBRG00000009808) #22	vps26c (ENSNBRG00000009784) #16	ENSNBRG00000009727 #14	rabgef1 (ENSNBRG00000009706)	KCNJ6 (ENSNBRG00000009687) #18	kctd7 (ENSNBRG00000009669)	ENSNBRG00000009649	ENSNBRG00000009638	pgrmc1 (ENSNBRG00000009630)	rab24 (ENSNBRG00000009555)	ENSNBRG00000009523	ENSNBRG00000009502	ENSNBRG00000009477	fgfr4 (ENSNBRG00000009440)	znf346 (ENSNBRG00000009412)	ENSNBRG00000009293
Midas cichlid	MODERN SPECIES	741		ap2b1 (ENSACIG00000015329)	mks1 (ENSACIG00000015391)	zw10 (ENSACIG00000015626)	ENSACIG00000015698 ##18	ENSACIG00000015865	ENSACIG00000015984	psmg1 (ENSACIG00000015995) #25	ENSACIG00000016042	ENSACIG00000016064	pou2f3 (ENSACIG00000016115)	ENSACIG00000016135	ENSACIG00000016144	ppm1e (ENSACIG00000016155)	SMG8 (ENSACIG00000016203)	KCNJ15 (ENSACIG00000016214) #22	vps26c (ENSACIG00000016228) #16	ENSACIG00000016249 #14	rabgef1 (ENSACIG00000016299)	KCNJ6 (ENSACIG00000016319) #18	kctd7 (ENSACIG00000016328)
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564
Tetraodontidae	ANCESTRAL SPECIES	6	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00940000169096	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00390000006721	ENSGT00950000182953.C.d	ENSGT00940000157692	ENSGT00940000165810	ENSGT00940000164917.d	ENSGT00390000009786	ENSGT00940000157213	ENSGT00940000157053.u.a	ENSGT00940000160014	ENSGT00940000157342.c.b	ENSGT00940000159087	ENSGT00940000164327.a	ENSGT00390000016584.c	ENSGT00940000164078.a.b.b	ENSGT00940000155097
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002405	pim1 (ENSTNIG00000002404)	ENSTNIG00000002403	ENSTNIG00000002400	ENSTNIG00000002399	ENSTNIG00000002398	ENSTNIG00000002396	ENSTNIG00000002395	ENSTNIG00000002394	arrdc2 (ENSTNIG00000002392)	sox17 (ENSTNIG00000002391)	sp5a (ENSTNIG00000002389)	mipa (ENSTNIG00000002388)	ENSTNIG00000002387	ENSTNIG00000002386	KCNJ15 (ENSTNIG00000002385) #22	ENSTNIG00000002384	sars1 (ENSTNIG00000002383)	ENSTNIG00000000133	ENSTNIG00000002382	glt8d2 (ENSTNIG00000003326)	ENSTNIG00000002380	ENSTNIG00000002379	ENSTNIG00000002378	ENSTNIG00000002377	ENSTNIG00000002376	ENSTNIG00000002375	ENSTNIG00000002374	ENSTNIG00000002368	siah1 (ENSTNIG00000002367)	n4bp1 (ENSTNIG00000002366)
Tetraodon	MODERN SPECIES	22	ENSTNIG00000007643	ENSTNIG00000000185 #14	vps26c (ENSTNIG00000007644) #16	ap2b1 (ENSTNIG00000007645)	mks1 (ENSTNIG00000007646)	zw10 (ENSTNIG00000007647)	ENSTNIG00000007648	tbl2 (ENSTNIG00000007649)	mybbp1a (ENSTNIG00000007650)	ENSTNIG00000007651 #25	ENSTNIG00000007652	pou2f3 (ENSTNIG00000007653)	TRIM37 (ENSTNIG00000007654)	ppm1e (ENSTNIG00000007655)	SMG8 (ENSTNIG00000007656)	KCNJ15 (ENSTNIG00000000371) #22	mat2b (ENSTNIG00000007657)	slc23a1 (ENSTNIG00000007658)	ENSTNIG00000007659	ENSTNIG00000007660	zgc:110540 (ENSTNIG00000007661)	pfdn1 (ENSTNIG00000007662)	ttc1 (ENSTNIG00000007663)	st6gal1 (ENSTNIG00000007664)	ncf1 (ENSTNIG00000007665)	gria1b (ENSTNIG00000007666)	nipal4 (ENSTNIG00000007667)	ENSTNIG00000001227	cdx1b (ENSTNIG00000000119)	ENSTNIG00000007668	taf9 (ENSTNIG00000007669)
Fugu	MODERN SPECIES	6	ap2b1 (ENSTRUG00000007072)	mks1 (ENSTRUG00000007554)	zw10 (ENSTRUG00000007890)	ENSTRUG00000028414 ##18	ENSTRUG00000020908	mybbp1a (ENSTRUG00000008378)	ENSTRUG00000021589	psmg1 (ENSTRUG00000002277) #25	ENSTRUG00000025505	ENSTRUG00000026313	slc37a2 (ENSTRUG00000002787)	pou2f3 (ENSTRUG00000008839)	TRIM37 (ENSTRUG00000008970)	ppm1e (ENSTRUG00000029181)	SMG8 (ENSTRUG00000009229)	KCNJ15 (ENSTRUG00000009300) #22	mat2b (ENSTRUG00000027322)	slc23a1 (ENSTRUG00000009428)	ENSTRUG00000023113	ENSTRUG00000009765	zgc:110540 (ENSTRUG00000025389)	pfdn1 (ENSTRUG00000029501)	ttc1 (ENSTRUG00000024638)	st6gal1 (ENSTRUG00000000554)	ncf1 (ENSTRUG00000000592)	gria1b (ENSTRUG00000000702)	nipal4 (ENSTRUG00000000906)	ins (ENSTRUG00000030504)	ENSTRUG00000024080	cdx1b (ENSTRUG00000026850)	ENSTRUG00000028162
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564
Ballan wrasse	MODERN SPECIES	148	mks1 (ENSLBEG00000008290)	zw10 (ENSLBEG00000008247)	ENSLBEG00000008224 ##18	ENSLBEG00000008165	tbl2 (ENSLBEG00000008058)	mybbp1a (ENSLBEG00000008013)	ENSLBEG00000007983	psmg1 (ENSLBEG00000007954) #25	ENSLBEG00000007932	slc37a2 (ENSLBEG00000007869)	pou2f3 (ENSLBEG00000007831)	ENSLBEG00000007787	ENSLBEG00000007757	ppm1e (ENSLBEG00000007717)	SMG8 (ENSLBEG00000007673)	KCNJ15 (ENSLBEG00000007635) #22	vps26c (ENSLBEG00000007584) #16	ENSLBEG00000007463 #14	rabgef1 (ENSLBEG00000007387)	KCNJ6 (ENSLBEG00000007359) #18	kctd7 (ENSLBEG00000007321)	pgk1 (ENSLBEG00000007228)	cox7b (ENSLBEG00000007198)	pgrmc1 (ENSLBEG00000007183)	rab24 (ENSLBEG00000007159)	ENSLBEG00000007108
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811.c	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00390000007635	ENSGT00950000182787.E.d.e.a	ENSGT00940000163584.b.a.a
Gilthead seabream	MODERN SPECIES	4	HLCS (ENSSAUG00010002151) #10	ENSSAUG00010002168	ENSSAUG00010002171	ENSSAUG00010002172	smfn (ENSSAUG00010002209)	ENSSAUG00010002488	mybbp1a (ENSSAUG00010002523)	ENSSAUG00010002762	psmg1 (ENSSAUG00010002764) #25	ENSSAUG00010002767	slc37a2 (ENSSAUG00010002963)	pou2f3 (ENSSAUG00010006413)	TRIM37 (ENSSAUG00010006420)	ppm1e (ENSSAUG00010006422)	SMG8 (ENSSAUG00010006424)	KCNJ15 (ENSSAUG00010006425) #22	vps26c (ENSSAUG00010006427) #16	ENSSAUG00010006432 #14	rabgef1 (ENSSAUG00010006436)	KCNJ6 (ENSSAUG00010006437) #18	kctd7 (ENSSAUG00010006438)	myl10 (ENSSAUG00010006440)	pgk1 (ENSSAUG00010006442)	ENSSAUG00010006458	pgrmc1 (ENSSAUG00010006459)	rab24 (ENSSAUG00010006461)	ENSSAUG00010006467	fgfr4 (ENSSAUG00010006650)	znf346 (ENSSAUG00010019862)	ENSSAUG00010019868	ENSSAUG00010001674
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811.c	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00390000007635	ENSGT00950000182787.E.d.e.a	ENSGT00940000163584.b.a.a
European seabass	MODERN SPECIES	4	ENSDLAG00005011842	ENSDLAG00005012011	ENSDLAG00005012326 ##18	ENSDLAG00005012370	ENSDLAG00005012388	ENSDLAG00005012402	ENSDLAG00005026439	ENSDLAG00005028665	ENSDLAG00005029079	ENSDLAG00005012785	ENSDLAG00005012833	ENSDLAG00005014749	ENSDLAG00005014792	ENSDLAG00005014895	ENSDLAG00005014900	ENSDLAG00005031281 #22	ENSDLAG00005014909 #16	ENSDLAG00005028496	ENSDLAG00005014945 #14	ENSDLAG00005015008	ENSDLAG00005015039	ENSDLAG00005028375	ENSDLAG00005023891	ENSDLAG00005032692	ENSDLAG00005023967	pgrmc1 (ENSDLAG00005030065)	ENSDLAG00005026939	ENSDLAG00005015293	ENSDLAG00005023977	ENSDLAG00005032907	ENSDLAG00005026783
Large yellow croaker	MODERN SPECIES	493	ap2b1 (ENSLCRG00005015672)	mks1 (ENSLCRG00005015722)	zw10 (ENSLCRG00005016257)	ENSLCRG00005016261 ##18	ENSLCRG00005016263	tbl2 (ENSLCRG00005016265)	mybbp1a (ENSLCRG00005016266)	ENSLCRG00005016271	psmg1 (ENSLCRG00005016273) #25	ENSLCRG00005016275	slc37a2 (ENSLCRG00005016276)	pou2f3 (ENSLCRG00005016304)	TRIM37 (ENSLCRG00005016312)	ppm1e (ENSLCRG00005016314)	SMG8 (ENSLCRG00005016315)	KCNJ15 (ENSLCRG00005016316) #22	vps26c (ENSLCRG00005016317) #16	ENSLCRG00005016320 #14	rabgef1 (ENSLCRG00005016321)	KCNJ6 (ENSLCRG00005016323) #18	kctd7 (ENSLCRG00005016324)	myl10 (ENSLCRG00005016326)	pgk1 (ENSLCRG00005016327)	COX7B2 (ENSLCRG00005016385)	pgrmc1 (ENSLCRG00005016388)	rab24 (ENSLCRG00005016390)	ENSLCRG00005016406	fgfr4 (ENSLCRG00005017458)	znf346 (ENSLCRG00005023021)	ENSLCRG00005023023	ENSLCRG00005023026
Perciformes	ANCESTRAL SPECIES	26	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C.f #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000160014	ENSGT00940000157053.u.a	ENSGT00390000007635	ENSGT00950000182787.E.d.e.a
Cottioidei	ANCESTRAL SPECIES	70										ENSGT00940000159536	ENSGT00940000157695	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a
Stickleback	MODERN SPECIES	7	ENSGACG00000020856	foxred1 (ENSGACG00000020857)	FCHSD2 (ENSGACG00000020858)	ENSGACG00000020859	ENSGACG00000020860	AQP11 (ENSGACG00000020861)	ENSGACG00000020862	vps26c (ENSGACG00000020863) #16	pdlim4 (ENSGACG00000020864)	p4ha2 (ENSGACG00000020865)	pou2f3 (ENSGACG00000020866)	TRIM37 (ENSGACG00000020867)	ENSGACG00000020868	ppm1e (ENSGACG00000020869)	SMG8 (ENSGACG00000020870)	KCNJ15 (ENSGACG00000020871) #22	ENSGACG00000020872	ENSGACG00000020873	slc22a21 (ENSGACG00000020874)	slc22a4 (ENSGACG00000020875)	irf1b (ENSGACG00000020876)	ENSGACG00000020877	fnip1 (ENSGACG00000020878)	ENSGACG00000020879	fstl4 (ENSGACG00000020880)	ENSGACG00000020881	ENSGACG00000020882	vdac1 (ENSGACG00000020883)	skp1 (ENSGACG00000020884)	PPP2CA (ENSGACG00000020885)	ENSGACG00000020886
Lumpfish	MODERN SPECIES	5	fnip1 (ENSCLMG00005016249)	ENSCLMG00005015350	irf1b (ENSCLMG00005015340)	ENSCLMG00005015310	ENSCLMG00005015300	slc22a21 (ENSCLMG00005015272)	ENSCLMG00005015125	ENSCLMG00005015119	ppm1e (ENSCLMG00005015116)	TRIM37 (ENSCLMG00005014874)	ENSCLMG00005014872	pou2f3 (ENSCLMG00005014864)	p4ha2 (ENSCLMG00005010316)	pdlim4 (ENSCLMG00005010270)	SMG8 (ENSCLMG00005010268)	KCNJ15 (ENSCLMG00005010266) #22	vps26c (ENSCLMG00005010264) #16	ENSCLMG00005010262	ENSCLMG00005010255	AQP11 (ENSCLMG00005010253)	ENSCLMG00005010245	FCHSD2 (ENSCLMG00005010240)	foxred1 (ENSCLMG00005010236)	STIM1 (ENSCLMG00005008968)	dub (ENSCLMG00005008964)	guca1d (ENSCLMG00005008963)	alg8 (ENSCLMG00005008959)	ccdc90b (ENSCLMG00005008957)	pcf11 (ENSCLMG00005008955)	ncbp3 (ENSCLMG00005008952)	ENSCLMG00005008948
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C.f #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000165564	ENSGT00940000160014	ENSGT00940000157053.u.a	ENSGT00390000007635	ENSGT00950000182787.E.d.e.a	ENSGT00940000163584.b.a.a
Channel bull blenny	MODERN SPECIES	5	zw10 (ENSCGOG00000019455)	ENSCGOG00000019445 ##18	ENSCGOG00000019443	tbl2 (ENSCGOG00000019439)	mybbp1a (ENSCGOG00000019416)	ENSCGOG00000019412	slc37a2 (ENSCGOG00000019408)	pou2f3 (ENSCGOG00000019405)	ENSCGOG00000019404	psmg1 (ENSCGOG00000019396) #25	ENSCGOG00000019389	slc37a2 (ENSCGOG00000018592)	pou2f3 (ENSCGOG00000018587)	TRIM37 (ENSCGOG00000018570)	SMG8 (ENSCGOG00000018565)	KCNJ15 (ENSCGOG00000018564) #22	vps26c (ENSCGOG00000018532) #16	ENSCGOG00000018520 #14	rabgef1 (ENSCGOG00000018516)	KCNJ6 (ENSCGOG00000018515) #18	kctd7 (ENSCGOG00000018512)	pgk1 (ENSCGOG00000017929)	cox7b (ENSCGOG00000017916)	pgrmc1 (ENSCGOG00000017909)	ENSCGOG00000017908	ENSCGOG00000017902	rab24 (ENSCGOG00000017888)	fgfr4 (ENSCGOG00000017726)	ncf1 (ENSCGOG00000017688)	st6gal1 (ENSCGOG00000017685)	ENSCGOG00000017683
Pike perch	MODERN SPECIES	22	ap2b1 (ENSSLUG00000014074)	mks1 (ENSSLUG00000014530)	zw10 (ENSSLUG00000015128)	ENSSLUG00000015284 ##18	ENSSLUG00000015293	tbl2 (ENSSLUG00000015309)	mybbp1a (ENSSLUG00000015365)	ENSSLUG00000015496	psmg1 (ENSSLUG00000015503) #25	ENSSLUG00000015511	slc37a2 (ENSSLUG00000015656)	pou2f3 (ENSSLUG00000016985)	TRIM37 (ENSSLUG00000017094)	ppm1e (ENSSLUG00000017858)	SMG8 (ENSSLUG00000017861)	KCNJ15 (ENSSLUG00000017864) #22	vps26c (ENSSLUG00000017868) #16	ENSSLUG00000017882 #14	rabgef1 (ENSSLUG00000017897)	KCNJ6 (ENSSLUG00000017903) #18	kctd7 (ENSSLUG00000017910)	pgk1 (ENSSLUG00000017922)	cox7b (ENSSLUG00000017974)	pgrmc1 (ENSSLUG00000017978)	rab24 (ENSSLUG00000017981)	ENSSLUG00000017984	fgfr4 (ENSSLUG00000018660)	znf346 (ENSSLUG00000025002)	ENSSLUG00000025006	ENSSLUG00000025027	zgc:77151 (ENSSLUG00000025042)
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Seriola	ANCESTRAL SPECIES	2	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT01080000257338.A.a.b	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00940000161811	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.b	ENSGT00940000154593.a.a.g.a
Greater amberjack	MODERN SPECIES	139	mks1 (ENSSDUG00000002303)	zw10 (ENSSDUG00000002280)	ENSSDUG00000002251 ##18	ENSSDUG00000002228	tbl2 (ENSSDUG00000002217)	mybbp1a (ENSSDUG00000002189)	ENSSDUG00000002170	ENSSDUG00000002165	psmg1 (ENSSDUG00000002153) #25	ENSSDUG00000002141	slc37a2 (ENSSDUG00000002097)	pou2f3 (ENSSDUG00000002026)	TRIM37 (ENSSDUG00000001973)	ppm1e (ENSSDUG00000001923)	SMG8 (ENSSDUG00000001902)	KCNJ15 (ENSSDUG00000001880) #22	vps26c (ENSSDUG00000001851) #16	ENSSDUG00000001780 #14	rabgef1 (ENSSDUG00000001735)	KCNJ6 (ENSSDUG00000001720) #18	kctd7 (ENSSDUG00000001705)	ENSSDUG00000001684	myl10 (ENSSDUG00000000713)	pgk1 (ENSSDUG00000000641)	ENSSDUG00000000622	pgrmc1 (ENSSDUG00000000598)	rab24 (ENSSDUG00000000585)	ENSSDUG00000000556	fgfr4 (ENSSDUG00000000486)	znf346 (ENSSDUG00000000468)	zgc:56585 (ENSSDUG00000000406)
Yellowtail amberjack	MODERN SPECIES	2907														ppm1e (ENSSLDG00000015886)	SMG8 (ENSSLDG00000015922)	ENSSLDG00000015948 #22	vps26c (ENSSLDG00000015964) #16	ENSSLDG00000016004 #14	rabgef1 (ENSSLDG00000016060)	KCNJ6 (ENSSLDG00000016099) #18	kctd7 (ENSSLDG00000016117)	myl10 (ENSSLDG00000016138)	pgk1 (ENSSLDG00000016181)	ENSSLDG00000016222	pgrmc1 (ENSSLDG00000016239)	rab24 (ENSSLDG00000016258)	ENSSLDG00000016314	fgfr4 (ENSSLDG00000016377)	ENSSLDG00000016408	znf346 (ENSSLDG00000016433)	zgc:56585 (ENSSLDG00000016446)
Barramundi perch	MODERN SPECIES	94	mks1 (ENSLCAG00010010727)	zw10 (ENSLCAG00010010794)	ENSLCAG00010011134	ENSLCAG00010011139 ##18	ENSLCAG00010011144	tbl2 (ENSLCAG00010011146)	mybbp1a (ENSLCAG00010011152)	ENSLCAG00010011161	psmg1 (ENSLCAG00010011164) #25	ENSLCAG00010011166	slc37a2 (ENSLCAG00010011229)	pou2f3 (ENSLCAG00010011509)	TRIM37 (ENSLCAG00010011559)	ppm1e (ENSLCAG00010011761)	SMG8 (ENSLCAG00010011765)	KCNJ15 (ENSLCAG00010011767) #22	vps26c (ENSLCAG00010011776) #16	ENSLCAG00010011813 #14	rabgef1 (ENSLCAG00010011821)	KCNJ6 (ENSLCAG00010011830) #18	kctd7 (ENSLCAG00010011837)	myl10 (ENSLCAG00010011844)	pgk1 (ENSLCAG00010011897)	ENSLCAG00010012055	pgrmc1 (ENSLCAG00010012064)	rab24 (ENSLCAG00010012072)	ENSLCAG00010012089	fgfr4 (ENSLCAG00010012180)	ENSLCAG00010012356	znf346 (ENSLCAG00010012362)	zgc:56585 (ENSLCAG00010012369)
Pleuronectoidei	ANCESTRAL SPECIES	23	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT01080000257365.b.a.a.a ##18	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00940000169781	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154593.a.a.g.a	ENSGT00940000154593.a.a.h	ENSGT00940000159577
Tongue sole	MODERN SPECIES	10	ap2b1 (ENSCSEG00000008961)	mks1 (ENSCSEG00000008865)	zw10 (ENSCSEG00000008835)	ENSCSEG00000008822 ##18	ENSCSEG00000008809	tbl2 (ENSCSEG00000019845)	mybbp1a (ENSCSEG00000019839)	ENSCSEG00000019837	psmg1 (ENSCSEG00000019830) #25	ENSCSEG00000019824	slc37a2 (ENSCSEG00000019804)	pou2f3 (ENSCSEG00000019794)	TRIM37 (ENSCSEG00000019771)	ppm1e (ENSCSEG00000019766)	SMG8 (ENSCSEG00000019761)	KCNJ15 (ENSCSEG00000019759) #22	vps26c (ENSCSEG00000019752) #16	ntm (ENSCSEG00000019736)	lim2.1 (ENSCSEG00000019623)	ENSCSEG00000019619	bsx (ENSCSEG00000019615)	hspa8 (ENSCSEG00000019608)	ENSCSEG00000019604	ENSCSEG00000019597	h2ax1 (ENSCSEG00000019590)	ENSCSEG00000019585	hyou1 (ENSCSEG00000019559)	vps11 (ENSCSEG00000019544)	BBX (ENSCSEG00000019500)	dlg2 (ENSCSEG00000019415)	ENSCSEG00000019369
Anabantaria	ANCESTRAL SPECIES	13	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154735.d.a.b	ENSGT00950000182952.A.a	ENSGT00940000165884
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000019785	ENSMAMG00000019786	ENSMAMG00000019819	ENSMAMG00000019827	ENSMAMG00000019832	ENSMAMG00000019842	ENSMAMG00000019847	ENSMAMG00000019861	ENSMAMG00000019866 #25	ENSMAMG00000019885	ENSMAMG00000019901	ENSMAMG00000019924	ENSMAMG00000019933	ENSMAMG00000019940	ENSMAMG00000019948	ENSMAMG00000019964 #22	ENSMAMG00000019970 #16	ENSMAMG00000019991 #14	ENSMAMG00000020012	ENSMAMG00000020023 #18	ENSMAMG00000020030	pgk1 (ENSMAMG00000020038)	ENSMAMG00000020065	pgrmc1 (ENSMAMG00000027786)	ENSMAMG00000025511	fgfr4 (ENSMAMG00000020112)	ENSMAMG00000027410	ENSMAMG00000020142	ENSMAMG00000020163	ENSMAMG00000000343	ENSMAMG00000000366
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT01100000263551.a.a	ENSGT00940000155206	ENSGT00510000047471	ENSGT00390000016427	ENSGT00940000153253.b.a	ENSGT00390000013836	ENSGT00390000017457	ENSGT00390000012905.d	ENSGT00500000044950 #25	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00950000183064.b #16	ENSGT00940000154465.C #14	ENSGT00940000154540.a	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00940000161327	ENSGT00390000008820.f	ENSGT00390000012178	ENSGT00940000160619	ENSGT00910000144316	ENSGT00940000155027.c.b	ENSGT00940000165564	ENSGT00940000159101	ENSGT00940000154735.d.a.b	ENSGT00950000182952.A.a	ENSGT00940000165884
Climbing perch	MODERN SPECIES	5	ENSATEG00000022238	ENSATEG00000022259	ENSATEG00000022323	ENSATEG00000022336	ENSATEG00000022350	ENSATEG00000022360	ENSATEG00000022367	ENSATEG00000022387	ENSATEG00000022391 #25	ENSATEG00000022407	ENSATEG00000022424	ENSATEG00000022457	ENSATEG00000022470	ENSATEG00000022492	ENSATEG00000022511	ENSATEG00000022527 #22	ENSATEG00000022532 #16	ENSATEG00000022551 #14	ENSATEG00000022578	ENSATEG00000022589 #18	ENSATEG00000025853	ENSATEG00000022615	ENSATEG00000022626	ENSATEG00000022637	RAB24 (ENSATEG00000022646)	ENSATEG00000022677	ENSATEG00000022718	ENSATEG00000022775	znf346 (ENSATEG00000025320)	ENSATEG00000022784	ENSATEG00000022795
Siamese fighting fish	MODERN SPECIES	5	ENSBSLG00000012670	ap2b1 (ENSBSLG00000013356)	mks1 (ENSBSLG00000013914)	zw10 (ENSBSLG00000014993)	ENSBSLG00000015589	tbl2 (ENSBSLG00000015601)	mybbp1a (ENSBSLG00000015640)	ENSBSLG00000015822	psmg1 (ENSBSLG00000016609) #25	ENSBSLG00000016645	slc37a2 (ENSBSLG00000016816)	pou2f3 (ENSBSLG00000017521)	TRIM37 (ENSBSLG00000017571)	ppm1e (ENSBSLG00000017810)	SMG8 (ENSBSLG00000017828)	ENSBSLG00000017838 #22	vps26c (ENSBSLG00000017850) #16	ENSBSLG00000017883 #14	rabgef1 (ENSBSLG00000017942)	KCNJ6 (ENSBSLG00000017962) #18	kctd7 (ENSBSLG00000018159)	pgk1 (ENSBSLG00000018315)	ENSBSLG00000018202	pgrmc1 (ENSBSLG00000018383)	rab24 (ENSBSLG00000018391)	ENSBSLG00000018463	fgfr4 (ENSBSLG00000019692)	znf346 (ENSBSLG00000002270)	hnrnpaba (ENSBSLG00000002315)	btg4 (ENSBSLG00000002371)	slc25a14 (ENSBSLG00000002413)
Tiger tail seahorse	MODERN SPECIES	37	rbm41 (ENSHCOG00000009614)	cldn2 (ENSHCOG00000009627)	CLIP2 (ENSHCOG00000009815)	GTF2IRD1 (ENSHCOG00000009976)	dtx2 (ENSHCOG00000009988)	tmem132e (ENSHCOG00000010022)	rad51d (ENSHCOG00000000315)	lig3 (ENSHCOG00000010086)	ENSHCOG00000010100	tmem248 (ENSHCOG00000010130)	DOC2B (ENSHCOG00000010176)	castor2 (ENSHCOG00000010211)	ENSHCOG00000010232	ppm1e (ENSHCOG00000010415)	SMG8 (ENSHCOG00000010432)	KCNJ15 (ENSHCOG00000010438) #22	vps26c (ENSHCOG00000010462) #16	ENSHCOG00000010473 #14	rabgef1 (ENSHCOG00000000328)	KCNJ6 (ENSHCOG00000010531) #18	kctd7 (ENSHCOG00000010553)	pgrmc1 (ENSHCOG00000010562)	rab24 (ENSHCOG00000010591)	ENSHCOG00000010651	fgfr4 (ENSHCOG00000010690)	znf346 (ENSHCOG00000010725)	zgc:56585 (ENSHCOG00000010741)	LARP1 (ENSHCOG00000010786)	faxdc2 (ENSHCOG00000010796)	macroh2a1 (ENSHCOG00000010820)	pitx1 (ENSHCOG00000010831)
Pinecone sodierfish	MODERN SPECIES	5	HEPACAM (ENSMMDG00005016167)	kctd7 (ENSMMDG00005016170)	rabgef1 (ENSMMDG00005016182)	TRIM37 (ENSMMDG00005016332)	ppm1e (ENSMMDG00005016364)	SMG8 (ENSMMDG00005016374)	ETS2 (ENSMMDG00005016375) #24	ENSMMDG00005016377	ENSMMDG00005016378	psmg1 (ENSMMDG00005005990) #25	ENSMMDG00005005995	slc37a2 (ENSMMDG00005006064)	pou2f3 (ENSMMDG00005008821)	DYRK1A (ENSMMDG00005008835) #17	KCNJ6 (ENSMMDG00005008857) #18	KCNJ15 (ENSMMDG00005008861) #22	vps26c (ENSMMDG00005008868) #16	ENSMMDG00005008879 #14	HLCS (ENSMMDG00005008881) #10	SIM2 (ENSMMDG00005008890) #9	riox2 (ENSMMDG00005008911)	tiprl (ENSMMDG00005008915)	ska2 (ENSMMDG00005008919)	ENSMMDG00005008926	ENSMMDG00005008928	ENSMMDG00005008938	arl3l2 (ENSMMDG00005008953)	ENSMMDG00005008958	ENSMMDG00005008977	ENSMMDG00005009291	ENSMMDG00005009294
Cod	MODERN SPECIES	20	ENSGMOG00000022737	ENSGMOG00000037100 ##18	ENSGMOG00000013193	ENSGMOG00000013180	ENSGMOG00000024837	ENSGMOG00000004139	ENSGMOG00000011822	ENSGMOG00000027042	ENSGMOG00000025309	ENSGMOG00000019365	ENSGMOG00000022983	ENSGMOG00000019362 #25	ENSGMOG00000019356	ENSGMOG00000000005	ENSGMOG00000000007 #18	ENSGMOG00000019748 #22	ENSGMOG00000000006	ENSGMOG00000016026	SIM2 (ENSGMOG00000016053) #9	HLCS (ENSGMOG00000016088) #10	ENSGMOG00000033327 #14	VPS26C (ENSGMOG00000008657) #16	ENSGMOG00000023801	ENSGMOG00000035671	ENSGMOG00000028683	ENSGMOG00000036518	ENSGMOG00000027907	ENSGMOG00000033496	ENSGMOG00000031862	ENSGMOG00000030030	ENSGMOG00000018628
Protacanthopterygii	ANCESTRAL SPECIES	51	ENSGT00390000018533	ENSGT00940000164942.a.a	ENSGT00940000153253.b.a	ENSGT00940000155974	ENSGT00390000013836	ENSGT00390000002172.A.a.e	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960.c.a #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a.g	ENSGT00390000015063	ENSGT00530000063743.b	ENSGT00530000063156.a.a.a	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00550000074975	ENSGT00390000006344
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	733								ENSGT00940000160816.b	ENSGT00940000159985.h.a #9	ENSGT00390000002960.c.b #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C.d #14	ENSGT00940000157408.a.a.b #17	ENSGT01080000257365.b.a.b.a.a.d.b.a #18	ENSGT00990000203615.b.a.a.a.b.c #22	ENSGT00940000160662.i #23	ENSGT00940000160202.a #24
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00510000046704.a.i	ENSGT00390000018533.f	ENSGT00940000159010.f	ENSGT00940000153253.b.a.c	ENSGT00940000155974.d	ENSGT00390000013836.g	ENSGT00390000002172.A.a.e.a	ENSGT00940000160816.a.a	ENSGT00940000159985.h.a #9	ENSGT00390000002960.c.b #10	ENSGT00730000111429.f #12	ENSGT00390000013771 #13	ENSGT00940000154465.C.d #14	ENSGT00940000157408.a.a.b #17	ENSGT01080000257365.b.a.b.a.a.d.b.a #18	ENSGT00990000203615.b.a.a.a.b.c #22	ENSGT00940000160662.i #23	ENSGT00940000160202.a #24	ENSGT00500000044950.f #25	ENSGT00390000005003.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000015063.a	ENSGT00530000063743.b.g	ENSGT00530000063156.a.a.a.f	ENSGT00990000211464	ENSGT00940000155838.f.e	ENSGT00940000155772.a.b.b	ENSGT00550000074975.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A.e
Salmo	ANCESTRAL SPECIES	17	ENSGT00940000164883.d	ENSGT00510000046704.a.i	ENSGT00390000018533.f	ENSGT00940000159010.f	ENSGT00940000153253.b.a.c	ENSGT00390000013836.g	ENSGT00390000002172.A.a.e.a	ENSGT00940000160816.a.a	ENSGT00940000159985.h.a #9	ENSGT00390000002960.c.b #10	ENSGT00730000111429.f #12	ENSGT00390000013771 #13	ENSGT00940000154465.C.d #14	ENSGT00940000157408.a.a.b #17	ENSGT01080000257365.b.a.b.a.a.d.b.a #18	ENSGT00990000203615.b.a.a.a.b.c #22	ENSGT00940000160662.i #23	ENSGT00940000160202.a #24	ENSGT00500000044950.f #25	ENSGT00390000005003.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000015063.a	ENSGT00530000063743.b.g	ENSGT00530000063156.a.a.a.f	ENSGT00990000211464	ENSGT00940000155838.f.e	ENSGT00940000155772.a.b.b	ENSGT00550000074975.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A.e
River trout	MODERN SPECIES	10	ENSSTUG00000017028	ENSSTUG00000017043	ENSSTUG00000017059	tbl2 (ENSSTUG00000017080)	bcl7ba (ENSSTUG00000017104)	ENSSTUG00000017123	ENSSTUG00000017140	SIM2 (ENSSTUG00000017151) #9	ENSSTUG00000017222 #10	ENSSTUG00000017225	ripply3 (ENSSTUG00000017228) #12	pigp (ENSSTUG00000017244) #13	ENSSTUG00000017261 #14	dyrk1aa (ENSSTUG00000017345) #17	KCNJ6 (ENSSTUG00000017528) #18	KCNJ15 (ENSSTUG00000017533) #22	erg (ENSSTUG00000017547) #23	ETS2 (ENSSTUG00000017608) #24	psmg1 (ENSSTUG00000017636) #25	prkrip1 (ENSSTUG00000017664)	ENSSTUG00000017674	nup88 (ENSSTUG00000017702)	rabep1 (ENSSTUG00000018241)	derl2 (ENSSTUG00000019576)	ENSSTUG00000019603	ENSSTUG00000002545	CBL (ENSSTUG00000002677)	ENSSTUG00000002719	polr2j (ENSSTUG00000002725)	alkbh4 (ENSSTUG00000002733)	lrwd1 (ENSSTUG00000002753)
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000005636	ENSSSAG00000005629	tmem120aa (ENSSSAG00000005659)	ENSSSAG00000088276	ENSSSAG00000005602	ENSSSAG00000005595	ENSSSAG00000005587	ENSSSAG00000104737	SIM2 (ENSSSAG00000005292) #9	HLCS (ENSSSAG00000066242) #10	ripply3 (ENSSSAG00000084247) #12	pigp (ENSSSAG00000066233) #13	TTC3 (ENSSSAG00000066200) #14	dyrk1aa (ENSSSAG00000066148) #17	KCNJ6 (ENSSSAG00000066125) #18	KCNJ15 (ENSSSAG00000119335) #22	erg (ENSSSAG00000066099) #23	ets2 (ENSSSAG00000066085) #24	psmg1 (ENSSSAG00000066079) #25	ENSSSAG00000094599	vps37d (ENSSSAG00000066075)	nup88 (ENSSSAG00000065275)	rabep1 (ENSSSAG00000064694)	derl2 (ENSSSAG00000007893)	ENSSSAG00000009879	ENSSSAG00000064621	ENSSSAG00000007934	polr2j (ENSSSAG00000064585)	alkbh4 (ENSSSAG00000064584)	lrwd1 (ENSSSAG00000064546)	orai2 (ENSSSAG00000064297)
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000164883.d	ENSGT00510000046704.a.i	ENSGT00390000018533.f	ENSGT00940000159010.f	ENSGT00940000153253.b.a.c	ENSGT00940000155974.d	ENSGT00390000013836.g	ENSGT00390000002172.A.a.e.a	ENSGT00940000160816.a.a	ENSGT00940000159985.h.a #9	ENSGT00390000002960.c.b #10	ENSGT00730000111429.f #12	ENSGT00390000013771 #13	ENSGT00940000157408.a.a.b #17	ENSGT01080000257365.b.a.b.a.a.d.b.a #18	ENSGT00990000203615.b.a.a.a.b.c #22	ENSGT00940000160662.i #23	ENSGT00940000160202.a #24	ENSGT00500000044950.f #25	ENSGT00390000005003.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000015063.a	ENSGT00530000063743.b.g	ENSGT00530000063156.a.a.a.f	ENSGT00990000211464	ENSGT00940000155838.f.e	ENSGT00940000155772.a.b.b	ENSGT00550000074975.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A.e
Rainbow trout	MODERN SPECIES	1	styxl1 (ENSOMYG00000013269)	ENSOMYG00000065420	ENSOMYG00000013307	ENSOMYG00000013345	ENSOMYG00000063636	ENSOMYG00000013370	ENSOMYG00000013395	ENSOMYG00000013410	ENSOMYG00000013444	SIM2 (ENSOMYG00000013464) #9	ENSOMYG00000013470 #10	pigp (ENSOMYG00000013487) #13	DYRK1A (ENSOMYG00000013578) #17	ENSOMYG00000014067	KCNJ6 (ENSOMYG00000014074) #18	KCNJ15 (ENSOMYG00000014092) #22	erg (ENSOMYG00000014143) #23	ETS2 (ENSOMYG00000014204) #24	ENSOMYG00000048904	psmg1 (ENSOMYG00000014245) #25	ENSOMYG00000014279	nup88 (ENSOMYG00000056910)	rabep1 (ENSOMYG00000014394)	derl2 (ENSOMYG00000016490)	ENSOMYG00000016499	ENSOMYG00000016513	ENSOMYG00000016597	alkbh4 (ENSOMYG00000016622)	lrwd1 (ENSOMYG00000016633)	bckdk (ENSOMYG00000016689)	orai2 (ENSOMYG00000016752)
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000164883.d	ENSGT00510000046704.a.i	ENSGT00390000018533.f	ENSGT00940000159010.f	ENSGT00940000153253.b.a.c	ENSGT00940000155974.d	ENSGT00390000013836.g	ENSGT00390000002172.A.a.e.a	ENSGT00940000160816.a.a	ENSGT00940000159985.h.a #9	ENSGT00390000002960.c.b #10	ENSGT00730000111429.f #12	ENSGT00390000013771 #13	ENSGT00940000157408.a.a.b #17	ENSGT01080000257365.b.a.b.a.a.d.b.a #18	ENSGT00990000203615.b.a.a.a.b.c #22	ENSGT00940000160662.i #23	ENSGT00940000160202.a #24	ENSGT00500000044950.f #25	ENSGT00390000005003.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000015063.a	ENSGT00530000063743.b.g	ENSGT00530000063156.a.a.a.f	ENSGT00940000155838.f.e	ENSGT00940000155772.a.b.b	ENSGT00550000074975.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A.e	ENSGT00390000015354.c.b.b.n
Chinook salmon	MODERN SPECIES	23	ENSOTSG00005032393	SMG8 (ENSOTSG00005032394)	ENSOTSG00005032396	ENSOTSG00005032399	nsun5 (ENSOTSG00005032400)	tbl2 (ENSOTSG00005032401)	bcl7ba (ENSOTSG00005032402)	ENSOTSG00005032404	ENSOTSG00005032405	SIM2 (ENSOTSG00005032406) #9	ENSOTSG00005032411 #10	RIPPLY3 (ENSOTSG00005032412) #12	pigp (ENSOTSG00005032414) #13	DYRK1A (ENSOTSG00005032419) #17	KCNJ6 (ENSOTSG00005032984) #18	KCNJ15 (ENSOTSG00005032985) #22	erg (ENSOTSG00005032986) #23	ETS2 (ENSOTSG00005032991) #24	psmg1 (ENSOTSG00005032994) #25	prkrip1 (ENSOTSG00005032995)	ENSOTSG00005032996	nup88 (ENSOTSG00005032997)	rabep1 (ENSOTSG00005033007)	derl2 (ENSOTSG00005037969)	ENSOTSG00005037974	CBL (ENSOTSG00005037978)	polr2j (ENSOTSG00005037980)	alkbh4 (ENSOTSG00005037981)	lrwd1 (ENSOTSG00005037985)	bckdk (ENSOTSG00005038000)	orai2 (ENSOTSG00005038015)
Coho salmon	MODERN SPECIES	20	ENSOKIG00005047885	SMG8 (ENSOKIG00005047878)	tmem120aa (ENSOKIG00005047825)	ENSOKIG00005047805	ENSOKIG00005047784	tbl2 (ENSOKIG00005047729)	bcl7ba (ENSOKIG00005047722)	ENSOKIG00005047712	SIM2 (ENSOKIG00005047681) #9	ENSOKIG00005047666 #10	RIPPLY3 (ENSOKIG00005047661) #12	pigp (ENSOKIG00005047655) #13	DYRK1A (ENSOKIG00005047500) #17	KCNJ6 (ENSOKIG00005047467) #18	erg (ENSOKIG00005047415) #23	KCNJ15 (ENSOKIG00005047399) #22	ETS2 (ENSOKIG00005047385) #24	psmg1 (ENSOKIG00005047368) #25	ENSOKIG00005047363	ENSOKIG00005047346	rabep1 (ENSOKIG00005046844)	derl2 (ENSOKIG00005046807)	mis12 (ENSOKIG00005046787)	ENSOKIG00005046744	CBL (ENSOKIG00005046732)	alkbh4 (ENSOKIG00005046728)	lrwd1 (ENSOKIG00005046697)	bckdk (ENSOKIG00005046583)	orai2 (ENSOKIG00005046569)	pex12 (ENSOKIG00005046564)	ap2b1 (ENSOKIG00005046506)
Huchen	MODERN SPECIES	789									pigp (ENSHHUG00000034996) #13	ENSHHUG00000035027 #14	ENSHHUG00000035051 #14	ENSHHUG00000035078	dyrk1aa (ENSHHUG00000035085) #17	KCNJ6 (ENSHHUG00000035147) #18	ENSHHUG00000035153	KCNJ15 (ENSHHUG00000035155) #22	erg (ENSHHUG00000035161) #23	ETS2 (ENSHHUG00000035203) #24	ENSHHUG00000035213	ENSHHUG00000035217
Salmoninae	ANCESTRAL SPECIES	121									ENSGT00940000160816.a.b	ENSGT00940000159985.h.b #9	ENSGT00390000002960.c.a #10	ENSGT00940000154465.C.c #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a.a #17	ENSGT01080000257365.b.a.b.a.a.d.b.b #18	ENSGT00990000203615.b.a.a.a.b.d #22	ENSGT00940000160662.j #23	ENSGT00940000160202.b #24	ENSGT00940000162556.E.b.a	ENSGT00500000044950.e #25	ENSGT00940000153392.b.b	ENSGT00390000005003.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000015063.b	ENSGT00530000063743.b.h	ENSGT00530000063156.a.a.a.e	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f.f	ENSGT00940000155772.a.b.a	ENSGT00550000074975.c
Salmoninae_a	ANCESTRAL SPECIES	55	ENSGT00510000046704.a.j	ENSGT00390000018533.e	ENSGT00940000164942.a.a	ENSGT00940000153253.b.a.d	ENSGT00940000155974.c	ENSGT00390000013836.h	ENSGT00390000002172.A.a.e.b	ENSGT00940000160816.a.b	ENSGT00940000159985.h.b #9	ENSGT00390000002960.c.a #10	ENSGT00730000111429.e #12	ENSGT00940000154465.C.c #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a.a #17	ENSGT01080000257365.b.a.b.a.a.d.b.b #18	ENSGT00990000203615.b.a.a.a.b.d #22	ENSGT00940000160662.j #23	ENSGT00990000214320	ENSGT00940000160202.b #24	ENSGT00940000162556.E.b.a	ENSGT00500000044950.e #25	ENSGT00940000153392.b.b	ENSGT00390000005003.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000015063.b	ENSGT00530000063743.b.h	ENSGT00530000063156.a.a.a.e	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f.f	ENSGT00940000155772.a.b.a
Oncorhynchus	ANCESTRAL SPECIES	21	ENSGT00510000046704.a.j	ENSGT00390000018533.e	ENSGT00940000164942.a.a	ENSGT00940000153253.b.a.d	ENSGT00940000155974.c	ENSGT00390000013836.h	ENSGT00390000002172.A.a.e.b	ENSGT00940000160816.a.b	ENSGT00940000159985.h.b #9	ENSGT00390000002960.c.a #10	ENSGT00730000111429.e #12	ENSGT00940000154465.C.c #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a.a #17	ENSGT01080000257365.b.a.b.a.a.d.b.b #18	ENSGT00990000203615.b.a.a.a.b.d #22	ENSGT00940000160662.j #23	ENSGT00990000214320	ENSGT00940000160202.b #24	ENSGT00940000162556.E.b.a	ENSGT00390000005003.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000015063.b	ENSGT00530000063743.b.h	ENSGT00530000063156.a.a.a.e	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f.f	ENSGT00940000155772.a.b.a	ENSGT00550000074975.c	ENSGT01030000234646.A.f
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000032196	ENSOMYG00000032191	ENSOMYG00000032173	nsun5 (ENSOMYG00000032158)	ENSOMYG00000032143	ENSOMYG00000032125	ENSOMYG00000032100	SIM2 (ENSOMYG00000032063) #9	HLCS (ENSOMYG00000031960) #10	ripply3 (ENSOMYG00000032054) #12	TTC3 (ENSOMYG00000031842) #14	ENSOMYG00000049970	vps26c (ENSOMYG00000031736) #16	dyrk1aa (ENSOMYG00000043768) #17	KCNJ6 (ENSOMYG00000043759) #18	KCNJ15 (ENSOMYG00000043754) #22	erg (ENSOMYG00000043702) #23	ENSOMYG00000063452	ETS2 (ENSOMYG00000043650) #24	ENSOMYG00000043637	prkrip1 (ENSOMYG00000043628)	ENSOMYG00000068435	ENSOMYG00000057641	ENSOMYG00000071326	nup88 (ENSOMYG00000043591)	rabep1 (ENSOMYG00000042021)	derl2 (ENSOMYG00000041904)	ENSOMYG00000072278	mis12 (ENSOMYG00000041903)	RNF26 (ENSOMYG00000041897)	ENSOMYG00000041892
Oncorhynchus_a	ANCESTRAL SPECIES	19	ENSGT00510000046704.a.j	ENSGT00390000018533.e	ENSGT00940000164942.a.a	ENSGT00940000153253.b.a.d	ENSGT00940000155974.c	ENSGT00390000013836.h	ENSGT00390000002172.A.a.e.b	ENSGT00940000160816.a.b	ENSGT00940000159985.h.b #9	ENSGT00390000002960.c.a #10	ENSGT00990000211738	ENSGT00940000154465.C.c #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a.a #17	ENSGT01080000257365.b.a.b.a.a.d.b.b #18	ENSGT00990000203615.b.a.a.a.b.d #22	ENSGT00940000160662.j #23	ENSGT00940000160202.b #24	ENSGT00940000162556.E.b.a	ENSGT00390000005003.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000015063.b	ENSGT00530000063743.b.h	ENSGT00530000063156.a.a.a.e	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f.f	ENSGT00940000155772.a.b.a	ENSGT00550000074975.c	ENSGT01030000234646.A.f	ENSGT00390000015354.c.b.b.m
Chinook salmon	MODERN SPECIES	33	SMG8 (ENSOTSG00005004926)	YPEL2 (ENSOTSG00005004924)	ENSOTSG00005004921	nsun5 (ENSOTSG00005004913)	tbl2 (ENSOTSG00005004912)	bcl7ba (ENSOTSG00005004910)	ENSOTSG00005004904	ENSOTSG00005004898	ENSOTSG00005004896 #9	HLCS (ENSOTSG00005004467) #10	ENSOTSG00005004465	TTC3 (ENSOTSG00005004463) #14	vps26c (ENSOTSG00005004461) #16	dyrk1aa (ENSOTSG00005004245) #17	KCNJ6 (ENSOTSG00005004240) #18	KCNJ15 (ENSOTSG00005004238) #22	erg (ENSOTSG00005004219) #23	ETS2 (ENSOTSG00005004214) #24	ENSOTSG00005004211	prkrip1 (ENSOTSG00005004209)	ENSOTSG00005004205	nup88 (ENSOTSG00005003673)	rabep1 (ENSOTSG00005001604)	derl2 (ENSOTSG00005001593)	mis12 (ENSOTSG00005001592)	RNF26 (ENSOTSG00005001591)	ENSOTSG00005001589	CBL (ENSOTSG00005001585)	polr2j (ENSOTSG00005001540)	bckdk (ENSOTSG00005000935)	orai2 (ENSOTSG00005000791)
Coho salmon	MODERN SPECIES	26	styxl1 (ENSOKIG00005043943)	ENSOKIG00005043912	SMG8 (ENSOKIG00005043903)	ENSOKIG00005043854	ENSOKIG00005043835	nsun5 (ENSOKIG00005043788)	TBL2 (ENSOKIG00005043774)	ENSOKIG00005043765	ENSOKIG00005043693	ENSOKIG00005043648 #9	HLCS (ENSOKIG00005043384) #10	TTC3 (ENSOKIG00005043287) #14	vps26c (ENSOKIG00005043181) #16	dyrk1aa (ENSOKIG00005042915) #17	KCNJ6 (ENSOKIG00005042876) #18	KCNJ15 (ENSOKIG00005042856) #22	erg (ENSOKIG00005042693) #23	ETS2 (ENSOKIG00005042612) #24	ENSOKIG00005042596	prkrip1 (ENSOKIG00005042589)	ENSOKIG00005042580	nup88 (ENSOKIG00005042485)	rabep1 (ENSOKIG00005042024)	derl2 (ENSOKIG00005041967)	mis12 (ENSOKIG00005041960)	RNF26 (ENSOKIG00005041950)	ENSOKIG00005041822	CBL (ENSOKIG00005041759)	polr2j (ENSOKIG00005041720)	bckdk (ENSOKIG00005041203)	orai2 (ENSOKIG00005041171)
Salmo	ANCESTRAL SPECIES	44	ENSGT00390000018533.e	ENSGT00940000164942.a.a	ENSGT00940000153253.b.a.d	ENSGT00940000155974.c	ENSGT00390000013836.h	ENSGT00390000002172.A.a.e.b	ENSGT00940000160816.a.b	ENSGT00940000159985.h.b #9	ENSGT00390000002960.c.a #10	ENSGT00730000111429.e #12	ENSGT00990000211738	ENSGT00940000154465.C.c #14	ENSGT00950000183064.b #16	ENSGT00940000157408.a.a.a #17	ENSGT01080000257365.b.a.b.a.a.d.b.b #18	ENSGT00990000203615.b.a.a.a.b.d #22	ENSGT00940000160662.j #23	ENSGT00990000214320	ENSGT00940000160202.b #24	ENSGT00940000162556.E.b.a	ENSGT00500000044950.e #25	ENSGT00940000153392.b.b	ENSGT00390000005003.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000015063.b	ENSGT00530000063743.b.h	ENSGT00530000063156.a.a.a.e	ENSGT00390000018665	ENSGT00390000016584.c	ENSGT00940000155838.f.f	ENSGT00940000155772.a.b.a
Atlantic salmon	MODERN SPECIES	4	styxl1 (ENSSSAG00000069573)	ENSSSAG00000069575	ENSSSAG00000069581	nsun5 (ENSSSAG00000069601)	ENSSSAG00000069607	ENSSSAG00000098468	ENSSSAG00000069618	SIM2 (ENSSSAG00000069632) #9	HLCS (ENSSSAG00000069647) #10	ripply3 (ENSSSAG00000069651) #12	ENSSSAG00000069655	TTC3 (ENSSSAG00000069669) #14	vps26c (ENSSSAG00000069718) #16	dyrk1aa (ENSSSAG00000006561) #17	KCNJ6 (ENSSSAG00000006713) #18	KCNJ15 (ENSSSAG00000086710) #22	erg (ENSSSAG00000006737) #23	ENSSSAG00000006940	ETS2 (ENSSSAG00000006718) #24	ENSSSAG00000006943	ENSSSAG00000118721	prkrip1 (ENSSSAG00000101653)	ENSSSAG00000097025	nup88 (ENSSSAG00000006973)	rabep1 (ENSSSAG00000007026)	ENSSSAG00000101415	mis12 (ENSSSAG00000113565)	RNF26 (ENSSSAG00000098393)	ENSSSAG00000007911	CBL (ENSSSAG00000096673)	RPB11 (ENSSSAG00000007950)
River trout	MODERN SPECIES	6	ENSSTUG00000028468	nsun5 (ENSSTUG00000028505)	tbl2 (ENSSTUG00000028585)	bcl7ba (ENSSTUG00000028596)	ENSSTUG00000028608	ENSSTUG00000028649	SIM2 (ENSSTUG00000028666) #9	HLCS (ENSSTUG00000028683) #10	ripply3 (ENSSTUG00000028749) #12	ENSSTUG00000028763	TTC3 (ENSSTUG00000028776) #14	vps26c (ENSSTUG00000028910) #16	dyrk1aa (ENSSTUG00000029066) #17	ENSSTUG00000029137	KCNJ6 (ENSSTUG00000029139) #18	KCNJ15 (ENSSTUG00000029152) #22	erg (ENSSTUG00000029169) #23	ETS2 (ENSSTUG00000029506) #24	ENSSTUG00000029551	ENSSTUG00000029562	psmg1 (ENSSTUG00000029573) #25	upk3b (ENSSTUG00000029589)	prkrip1 (ENSSTUG00000029609)	ENSSTUG00000029616	nup88 (ENSSTUG00000029633)	rabep1 (ENSSTUG00000029838)	derl2 (ENSSTUG00000031462)	mis12 (ENSSTUG00000031493)	ENSSTUG00000031511	ENSSTUG00000031526	CBL (ENSSTUG00000002617)
Huchen	MODERN SPECIES	60										HLCS (ENSHHUG00000031534) #10	ENSHHUG00000031536 #12	TTC3 (ENSHHUG00000031554) #14	vps26c (ENSHHUG00000031585) #16	dyrk1aa (ENSHHUG00000031598) #17	KCNJ6 (ENSHHUG00000031636) #18	KCNJ15 (ENSHHUG00000031639) #22	erg (ENSHHUG00000031645) #23	ETS2 (ENSHHUG00000031717) #24	ENSHHUG00000031741	psmg1 (ENSHHUG00000031748) #25	upk3b (ENSHHUG00000031761)	prkrip1 (ENSHHUG00000031779)	ENSHHUG00000031791	nup88 (ENSHHUG00000031800)	rabep1 (ENSHHUG00000031884)	derl2 (ENSHHUG00000031974)	mis12 (ENSHHUG00000032155)	RNF26 (ENSHHUG00000032157)	ENSHHUG00000032162	CBL (ENSHHUG00000032213)	polr2j (ENSHHUG00000032225)
Northern pike	MODERN SPECIES	6	ENSELUG00000034190	POM121 (ENSELUG00000014032)	nsun5 (ENSELUG00000013971)	tbl2 (ENSELUG00000013953)	bcl7ba (ENSELUG00000013922)	ENSELUG00000013903	SIM2 (ENSELUG00000013832) #9	HLCS (ENSELUG00000013780) #10	ripply3 (ENSELUG00000013761) #12	pigp (ENSELUG00000026253) #13	tcn2 (ENSELUG00000001103)	TTC3 (ENSELUG00000013660) #14	vps26c (ENSELUG00000013599) #16	dyrk1aa (ENSELUG00000013555) #17	KCNJ6 (ENSELUG00000013515) #18	KCNJ15 (ENSELUG00000013494) #22	erg (ENSELUG00000013480) #23	ETS2 (ENSELUG00000013434) #24	psmg1 (ENSELUG00000000488) #25	prkrip1 (ENSELUG00000013385)	ENSELUG00000013349	nup88 (ENSELUG00000013334)	rabep1 (ENSELUG00000013265)	derl2 (ENSELUG00000013097)	mis12 (ENSELUG00000013031)	RNF26 (ENSELUG00000013018)	ENSELUG00000012996	CBL (ENSELUG00000012919)	polr2j (ENSELUG00000012822)	alkbh4 (ENSELUG00000012802)	lrwd1 (ENSELUG00000012779)
Osteoglossiformes	ANCESTRAL SPECIES	31	ENSGT00940000156881.g	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00990000205422	ENSGT00390000006659	ENSGT00390000000083.b	ENSGT00940000160816	ENSGT00940000159985 #9	ENSGT00390000002960 #10	ENSGT00730000111429 #12	ENSGT00390000013771 #13	ENSGT00940000154465.C #14	ENSGT00950000183064.b #16	ENSGT00940000157408.b #17	ENSGT01080000257365.b.a.b.a.a #18	ENSGT00990000203615.b.a.a.a.b #22	ENSGT00940000160662 #23	ENSGT00940000160202 #24	ENSGT00500000044950 #25	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00530000063516.a.a.a.a	ENSGT00530000063516.a.b	ENSGT00940000158413	ENSGT00390000012877	ENSGT01030000234582.f.a.b	ENSGT01030000234582.e.b	ENSGT00530000063947.C.d	ENSGT00940000159975
Asian bonytongue	MODERN SPECIES	19	BBX (ENSSFOG00015012659)	ENSSFOG00015012740	ENSSFOG00015012751	tiprl (ENSSFOG00015012758)	riox2 (ENSSFOG00015012784)	ENSSFOG00015012805	ENSSFOG00015012879	SIM2 (ENSSFOG00015012955) #9	HLCS (ENSSFOG00015012983) #10	ripply3 (ENSSFOG00015033184) #12	pigp (ENSSFOG00015013022) #13	TTC3 (ENSSFOG00015013080) #14	vps26c (ENSSFOG00015013211) #16	dyrk1ab (ENSSFOG00015013261) #17	KCNJ6 (ENSSFOG00015013297) #18	KCNJ15 (ENSSFOG00015013312) #22	erg (ENSSFOG00015013330) #23	ETS2 (ENSSFOG00015013427) #24	psmg1 (ENSSFOG00015013469) #25	mpzl1l (ENSSFOG00015013481)	KLHL35 (ENSSFOG00015013497)	ENSSFOG00015032933	ENSSFOG00015013526	emsy (ENSSFOG00015013573)	thap12a (ENSSFOG00015013691)	ENSSFOG00015013705	wnt11 (ENSSFOG00015013752)	ENSSFOG00015029037	uvrag (ENSSFOG00015013774)	dgat2 (ENSSFOG00015013813)	mogat2 (ENSSFOG00015013832)
P. kingsleyae	MODERN SPECIES	350										ripply3 (ENSPKIG00000014381) #12	pigp (ENSPKIG00000014365) #13	TTC3 (ENSPKIG00000014318) #14	vps26c (ENSPKIG00000014271) #16	KCNJ6 (ENSPKIG00000014251) #18	DYRK1A (ENSPKIG00000014213) #17	KCNJ15 (ENSPKIG00000014182) #22	erg (ENSPKIG00000014132) #23	ETS2 (ENSPKIG00000014093) #24	ENSPKIG00000014078	psmg1 (ENSPKIG00000014060) #25	mpzl1l (ENSPKIG00000014033)	KLHL35 (ENSPKIG00000014013)	ENSPKIG00000014002	emsy (ENSPKIG00000013871)	thap12a (ENSPKIG00000013809)	ENSPKIG00000013780	wnt11 (ENSPKIG00000013749)	ENSPKIG00000013735	uvrag (ENSPKIG00000013651)	dgat2 (ENSPKIG00000013591)	mogat2 (ENSPKIG00000013578)
Spotted gar	MODERN SPECIES	669	CBLB (ENSLOCG00000005184)	BBX (ENSLOCG00000005165)	ENSLOCG00000005147	ENSLOCG00000005120	tiprl (ENSLOCG00000005101)	riox2 (ENSLOCG00000005079)	ENSLOCG00000005069	SIM2 (ENSLOCG00000005059) #9	HLCS (ENSLOCG00000005030) #10	ripply3 (ENSLOCG00000005009) #12	pigp (ENSLOCG00000004992) #13	TTC3 (ENSLOCG00000004974) #14	vps26c (ENSLOCG00000004966) #16	dyrk1ab (ENSLOCG00000004953) #17	KCNJ6 (ENSLOCG00000004938) #18	KCNJ15 (ENSLOCG00000018193) #22	erg (ENSLOCG00000004920) #23	ETS2 (ENSLOCG00000004903) #24	psmg1 (ENSLOCG00000004889) #25	mpzl1l (ENSLOCG00000004876)	KLHL35 (ENSLOCG00000004856)	ENSLOCG00000004838	emsy (ENSLOCG00000004825)	thap12b (ENSLOCG00000004788)	ENSLOCG00000004777	wnt11 (ENSLOCG00000004765)	uvrag (ENSLOCG00000004748)	dgat2 (ENSLOCG00000004729)	mogat2 (ENSLOCG00000004715)	MAP6 (ENSLOCG00000004684)	ENSLOCG00000004670
Reedfish	MODERN SPECIES	12	zmynd19 (ENSECRG00000007830)	alcama (ENSECRG00000007807)	CBLB (ENSECRG00000007773)	BBX (ENSECRG00000007730)	tiprl (ENSECRG00000007709)	riox2 (ENSECRG00000007683)	ENSECRG00000007654	SIM2 (ENSECRG00000007634) #9	HLCS (ENSECRG00000007622) #10	ENSECRG00000007608	pigp (ENSECRG00000007599) #13	ENSECRG00000007576 #14	vps26c (ENSECRG00000007541) #16	dyrk1ab (ENSECRG00000007487) #17	KCNJ6 (ENSECRG00000007465) #18	KCNJ15 (ENSECRG00000007456) #22	erg (ENSECRG00000007416) #23	ETS2 (ENSECRG00000007384) #24	psmg1 (ENSECRG00000007374) #25	BRWD1 (ENSECRG00000007330) #26	ENSECRG00000007315	get1 (ENSECRG00000007303)	sh3bgr (ENSECRG00000007282) #30	ENSECRG00000007261	pcp4a (ENSECRG00000007251) #32	DSCAM (ENSECRG00000007139) #33	bace2 (ENSECRG00000007072) #34	FAM3B (ENSECRG00000007065) #35	TMPRSS2 (ENSECRG00000006779)	ATM (ENSECRG00000006745)	ENSECRG00000006723
Elephant shark	MODERN SPECIES	1740										ENSCMIG00000003472 #14	ENSCMIG00000003468 #14	ENSCMIG00000003458 #14	vps26c (ENSCMIG00000003446) #16	dyrk1ab (ENSCMIG00000003327) #17	KCNJ6 (ENSCMIG00000003281) #18	KCNJ15 (ENSCMIG00000003262) #22	erg (ENSCMIG00000003220) #23	ETS2 (ENSCMIG00000003195) #24	ENSCMIG00000003192 #25	ENSCMIG00000001977 #26	ENSCMIG00000001320
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.b #22
Hagfish	MODERN SPECIES	34	ppp2r1ba (ENSEBUG00000002361)	u2af1 (ENSEBUG00000002608)	ENSEBUG00000008478	ENSEBUG00000005275	ENSEBUG00000003351	ENSEBUG00000001834	ENSEBUG00000015422	ENSEBUG00000009392	ENSEBUG00000002435	ENSEBUG00000015567 #24	ENSEBUG00000014783	ENSEBUG00000007390	ENSEBUG00000003624	ENSEBUG00000013244	ENSEBUG00000014346	KCNJ15 (ENSEBUG00000012573) #22	ENSEBUG00000017055	ENSEBUG00000003438	ENSEBUG00000011042	ENSEBUG00000009319	ENSEBUG00000007846	ZPR1 (ENSEBUG00000001448)	TOMM40L (ENSEBUG00000001614)	ENSEBUG00000000599	ENSEBUG00000001442
Lamprey	MODERN SPECIES	85																ENSPMAG00000002271 #22	ENSPMAG00000002270	flrt3 (ENSPMAG00000002268)	crnkl1 (ENSPMAG00000002250)	ENSPMAG00000002247	ENSPMAG00000009988	ENSPMAG00000002243	ENSPMAG00000002228	ENSPMAG00000002200	sars2 (ENSPMAG00000002160)	ENSPMAG00000002158	mcm5 (ENSPMAG00000002132)	ENSPMAG00000002121
Vertebrata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Sarcopterygii	ANCESTRAL SPECIES	312				ENSGT01030000234540.C	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22
Tetrapoda	ANCESTRAL SPECIES	94				ENSGT00940000155795	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00390000011582	ENSGT00390000009272	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00390000003894	ENSGT00390000009529	ENSGT00940000160966	ENSGT00940000164842
Amniota	ANCESTRAL SPECIES	55		ENSGT00940000155795	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000154757	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00550000075099	ENSGT00390000011582	ENSGT00390000009272	ENSGT00390000008714.a	ENSGT00390000003894	ENSGT00390000009529	ENSGT00940000160966
Mammalia	ANCESTRAL SPECIES	97	ENSGT01030000234540.B.a.a.a.a	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b	ENSGT01030000234540.B.a.a.a.b.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000162973	ENSGT00940000161240	ENSGT00940000164339	ENSGT00940000158895.c.a	ENSGT00940000158895.c.b
Platypus	MODERN SPECIES	88	ENSOANG00000020663	ENSOANG00000019718	ENSOANG00000037103	ENSOANG00000031496	ENSOANG00000045163	VANGL2 (ENSOANG00000046213)	NCSTN (ENSOANG00000003388)	COPA (ENSOANG00000038210)	ENSOANG00000002881	ENSOANG00000041758	ENSOANG00000044202	CASQ1 (ENSOANG00000043988)	ATP1A2 (ENSOANG00000048435)	IGSF8 (ENSOANG00000037056)	KCNJ9 (ENSOANG00000039350) ##18	KCNJ10 (ENSOANG00000045748) ##22	ENSOANG00000008440	ENSOANG00000038622	ENSOANG00000041895	ENSOANG00000042932	ENSOANG00000041963	TAGLN2 (ENSOANG00000037012)	CFAP45 (ENSOANG00000015279)	VSIG8 (ENSOANG00000047790)	ENSOANG00000039159	ITLN1 (ENSOANG00000050751)	DUSP23 (ENSOANG00000037317)	ENSOANG00000042086	ENSOANG00000047984	CADM3 (ENSOANG00000040428)	ENSOANG00000005485
Theria	ANCESTRAL SPECIES	3	ENSGT01030000234540.B.a.a.a.b.b.a	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163654	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A
Marsupialia	ANCESTRAL SPECIES	3	ENSGT01030000234540.B.a.a.a.b.b.a.a.a	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b.a	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163654	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b.a	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b.g.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.a	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163654	ENSGT00940000162870
Diprotodontia	ANCESTRAL SPECIES	30	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b.a	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b.g.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.a	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163654	ENSGT00940000162870
Diprotodontia_a	ANCESTRAL SPECIES	28	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b.a	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b.g.a	ENSGT01100000263515.a.b.a.b.b.h.b.g.b	ENSGT00940000159272.B.y	ENSGT00940000159272.B.z	ENSGT01100000263515.a.b.a.b.b.h.a.a	ENSGT00940000163973
Common wonbat	MODERN SPECIES	1070	ENSVURG00010001911	ENSVURG00010001994	VANGL2 (ENSVURG00010002013)	NHLH1 (ENSVURG00010002027)	NCSTN (ENSVURG00010002039)	COPA (ENSVURG00010002074)	ENSVURG00010002119	ENSVURG00010002144	PEA15 (ENSVURG00010002176)	ENSVURG00010002187	ENSVURG00010002197	ATP1A4 (ENSVURG00010002214)	ATP1A2 (ENSVURG00010002235)	IGSF8 (ENSVURG00010002261)	KCNJ9 (ENSVURG00010002274) ##18	KCNJ10 (ENSVURG00010002293) ##22	PIGM (ENSVURG00010002300)	ENSVURG00010002305	IGSF9 (ENSVURG00010002314)	TAGLN2 (ENSVURG00010002337)	CFAP45 (ENSVURG00010002351)	VSIG8 (ENSVURG00010002373)	SLAMF8 (ENSVURG00010002381)	ENSVURG00010002392	DUSP23 (ENSVURG00010002433)	CRP (ENSVURG00010002451)	ENSVURG00010002472	ENSVURG00010002492	ENSVURG00010002501	OR10J1 (ENSVURG00010002506)	OR10J4 (ENSVURG00010002513)
koala	MODERN SPECIES	379	ENSPCIG00000005840	ENSPCIG00000005846	ENSPCIG00000005847	VANGL2 (ENSPCIG00000027245)	NHLH1 (ENSPCIG00000027242)	NCSTN (ENSPCIG00000027237)	COPA (ENSPCIG00000027223)	PEX19 (ENSPCIG00000027213)	ENSPCIG00000027207	PEA15 (ENSPCIG00000027204)	CASQ1 (ENSPCIG00000027196)	ATP1A4 (ENSPCIG00000027191)	ATP1A2 (ENSPCIG00000027179)	IGSF8 (ENSPCIG00000027172)	KCNJ9 (ENSPCIG00000027169) ##18	ENSPCIG00000031921 ##22	PIGM (ENSPCIG00000027165)	ENSPCIG00000027161	IGSF9 (ENSPCIG00000027106)
Wallaby	MODERN SPECIES	12993																KCNJ10 (ENSMEUG00000004062) ##22	ENSMEUG00000004029
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000005337	ENSSHAG00000005862	ENSSHAG00000029961	ENSSHAG00000002637	ENSSHAG00000004544	VANGL2 (ENSSHAG00000005676)	NHLH1 (ENSSHAG00000026357)	NCSTN (ENSSHAG00000006763)	COPA (ENSSHAG00000006995)	ENSSHAG00000007538	PEA15 (ENSSHAG00000032167)	CASQ1 (ENSSHAG00000008276)	ATP1A4 (ENSSHAG00000029666)	ENSSHAG00000009196	IGSF8 (ENSSHAG00000009735)	ENSSHAG00000028824 ##22	PIGM (ENSSHAG00000025008)	ENSSHAG00000028223 ##18	ENSSHAG00000010826	IGSF9 (ENSSHAG00000011017)	TAGLN2 (ENSSHAG00000021986)	CFAP45 (ENSSHAG00000011462)	VSIG8 (ENSSHAG00000011914)	SLAMF8 (ENSSHAG00000012172)	ENSSHAG00000030943	ENSSHAG00000032205	CRP (ENSSHAG00000032180)	ENSSHAG00000024036	OR10J1 (ENSSHAG00000002709)	OR10J4 (ENSSHAG00000030278)	ENSSHAG00000001073
Opossum	MODERN SPECIES	1	ENSMODG00000049937	ENSMODG00000028202	ENSMODG00000009405	ENSMODG00000009452	ENSMODG00000028303	VANGL2 (ENSMODG00000009466)	NCSTN (ENSMODG00000009496)	COPA (ENSMODG00000009549)	PEX19 (ENSMODG00000009571)	ENSMODG00000009621	PEA15 (ENSMODG00000009629)	CASQ1 (ENSMODG00000009644)	ATP1A2 (ENSMODG00000009958)	ENSMODG00000009976	KCNJ9 (ENSMODG00000009988) ##18	KCNJ10 (ENSMODG00000024584) ##22	PIGM (ENSMODG00000009991)	ENSMODG00000010009	IGSF9 (ENSMODG00000010024)	TAGLN2 (ENSMODG00000048991)	CFAP45 (ENSMODG00000010039)	VSIG8 (ENSMODG00000010046)	SLAMF8 (ENSMODG00000010050)	DUSP23 (ENSMODG00000010053)	ENSMODG00000010057	ENSMODG00000037938	ENSMODG00000041605	APCS (ENSMODG00000038936)	OR10J1 (ENSMODG00000049391)	OR10J4 (ENSMODG00000042252)	ENSMODG00000044389
Eutheria	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163654
Boreoeutheria	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Laurasiatheria	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Common shrew	MODERN SPECIES	13405																KCNJ10 (ENSSARG00000000517) ##22
Hedgehog	MODERN SPECIES	11749																KCNJ10 (ENSEEUG00000007513) ##22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Artiodactyla	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT00860000136134.a	ENSGT00940000169892	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973
Suina	ANCESTRAL SPECIES	8	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b.b	ENSGT00860000136134.a	ENSGT01100000263515.a.b.a.b.b.h.b.a	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973
Chacoan peccary	MODERN SPECIES	139	SLAMF1 (ENSCWAG00000010626)	CD84 (ENSCWAG00000010075)	ENSCWAG00000010006	VANGL2 (ENSCWAG00000009946)	NHLH1 (ENSCWAG00000009928)	NCSTN (ENSCWAG00000009817)	COPA (ENSCWAG00000009731)	PEX19 (ENSCWAG00000009664)	DCAF8 (ENSCWAG00000009541)	PEA15 (ENSCWAG00000009481)	ENSCWAG00000009453	ATP1A4 (ENSCWAG00000009229)	ATP1A2 (ENSCWAG00000008877)	IGSF8 (ENSCWAG00000008813)	KCNJ9 (ENSCWAG00000008781) ##18	KCNJ10 (ENSCWAG00000008771) ##22	PIGM (ENSCWAG00000008752)	SLAMF9 (ENSCWAG00000008674)	IGSF9 (ENSCWAG00000008204)	TAGLN2 (ENSCWAG00000008118)	CFAP45 (ENSCWAG00000007904)	VSIG8 (ENSCWAG00000007824)	SLAMF8 (ENSCWAG00000007725)	DUSP23 (ENSCWAG00000016731)	CRP (ENSCWAG00000016701)	ENSCWAG00000016674	ENSCWAG00000016650	APCS (ENSCWAG00000016624)	OR10J1 (ENSCWAG00000016572)	ENSCWAG00000016524	ENSCWAG00000016513
Pig	MODERN SPECIES	12	SLAMF1 (ENSSSCG00000006380)	CD84 (ENSSSCG00000006381)	SLAMF6 (ENSSSCG00000006382)	VANGL2 (ENSSSCG00000006383)	NHLH1 (ENSSSCG00000006384)	NCSTN (ENSSSCG00000006385)	COPA (ENSSSCG00000006386)	PEX19 (ENSSSCG00000023091)	DCAF8 (ENSSSCG00000006388)	PEA15 (ENSSSCG00000032164)	CASQ1 (ENSSSCG00000006390)	ATP1A4 (ENSSSCG00000054190)	ATP1A2 (ENSSSCG00000006391)	IGSF8 (ENSSSCG00000006392)	KCNJ9 (ENSSSCG00000006393) ##18	KCNJ10 (ENSSSCG00000031858) ##22	SLAMF9 (ENSSSCG00000056276)	IGSF9 (ENSSSCG00000006396)	ENSSSCG00000006395	CFAP45 (ENSSSCG00000006394)	VSIG8 (ENSSSCG00000006399)	SLAMF8 (ENSSSCG00000006398)	FCRL6 (ENSSSCG00000006397)	DUSP23 (ENSSSCG00000033585)	ENSSSCG00000060222	CRP (ENSSSCG00000006403)	ENSSSCG00000054109	APCS (ENSSSCG00000037268)	OR10J5 (ENSSSCG00000058791)	OR10J1 (ENSSSCG00000024008)	OR10J4 (ENSSSCG00000029064)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT00860000136134.a	ENSGT00940000169892	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973
Camelidae	ANCESTRAL SPECIES	6	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT00860000136134.a	ENSGT00940000163968	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A	ENSGT00860000136134.b	ENSGT00390000006372	ENSGT00940000159779
Arabian camel	MODERN SPECIES	13	CD84 (ENSCDRG00005014243)	ENSCDRG00005014186	VANGL2 (ENSCDRG00005014096)	NHLH1 (ENSCDRG00005014066)	NCSTN (ENSCDRG00005013763)	COPA (ENSCDRG00005012848)	PEX19 (ENSCDRG00005012698)	DCAF8 (ENSCDRG00005012589)	ENSCDRG00005012578	PEA15 (ENSCDRG00005012512)	CASQ1 (ENSCDRG00005012452)	ATP1A4 (ENSCDRG00005012203)	ATP1A2 (ENSCDRG00005011929)	IGSF8 (ENSCDRG00005011871)	KCNJ9 (ENSCDRG00005011835) ##18	ENSCDRG00005011795 ##22	SLAMF9 (ENSCDRG00005011759)	IGSF9 (ENSCDRG00005011409)	TAGLN2 (ENSCDRG00005011277)	CFAP45 (ENSCDRG00005011122)	VSIG8 (ENSCDRG00005011035)	SLAMF8 (ENSCDRG00005010977)	ENSCDRG00005010919	DUSP23 (ENSCDRG00005010892)	ENSCDRG00005010794	ENSCDRG00005010739	FCER1A (ENSCDRG00005010660)	ENSCDRG00005010626	ENSCDRG00005010582	ACKR1 (ENSCDRG00005010530)	CADM3 (ENSCDRG00005010368)
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT00860000136134.a	ENSGT00940000169892	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973
Cetacea	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.f	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT00860000136134.a	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000163968	ENSGT00940000162870
Blue whale	MODERN SPECIES		SLAMF1 (ENSBMSG00010004498)	CD84 (ENSBMSG00010004346)	SLAMF6 (ENSBMSG00010004273)	VANGL2 (ENSBMSG00010004258)	NHLH1 (ENSBMSG00010004254)	NCSTN (ENSBMSG00010004238)	COPA (ENSBMSG00010004220)	PEX19 (ENSBMSG00010004209)	PEA15 (ENSBMSG00010004198)	DCAF8 (ENSBMSG00010004164)	CASQ1 (ENSBMSG00010004131)	ATP1A4 (ENSBMSG00010004094)	ATP1A2 (ENSBMSG00010004045)	IGSF8 (ENSBMSG00010004031)	KCNJ9 (ENSBMSG00010004026) ##18	ENSBMSG00010004017 ##22	IGSF9 (ENSBMSG00010004001)	TAGLN2 (ENSBMSG00010003989)	CFAP45 (ENSBMSG00010003982)	VSIG8 (ENSBMSG00010003973)	SLAMF8 (ENSBMSG00010003959)	DUSP23 (ENSBMSG00010003926)	ENSBMSG00010003919	CRP (ENSBMSG00010003910)	ENSBMSG00010003896	OR10J3 (ENSBMSG00010003881)	FCER1A (ENSBMSG00010003865)	ENSBMSG00010003852	ACKR1 (ENSBMSG00010003846)	CADM3 (ENSBMSG00010003820)	ENSBMSG00010003801
Odontoceti	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.f	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Sperm whale	MODERN SPECIES	15	CD48 (ENSPCTG00005001646)	SLAMF1 (ENSPCTG00005001667)	CD84 (ENSPCTG00005001690)	SLAMF6 (ENSPCTG00005001730)	VANGL2 (ENSPCTG00005001769)	NHLH1 (ENSPCTG00005001785)	NCSTN (ENSPCTG00005001806)	COPA (ENSPCTG00005001916)	PEX19 (ENSPCTG00005002201)	DCAF8 (ENSPCTG00005002235)	PEA15 (ENSPCTG00005002277)	ENSPCTG00005002292	ATP1A2 (ENSPCTG00005002328)	IGSF8 (ENSPCTG00005002378)	KCNJ9 (ENSPCTG00005002389) ##18	ENSPCTG00005002406 ##22	CFAP45 (ENSPCTG00005002458)	VSIG8 (ENSPCTG00005002489)	SLAMF8 (ENSPCTG00005002506)	DUSP23 (ENSPCTG00005002559)	CRP (ENSPCTG00005002569)	ENSPCTG00005002583	APCS (ENSPCTG00005002592)	ENSPCTG00005002613	ENSPCTG00005002622	OR10J3 (ENSPCTG00005002639)	FCER1A (ENSPCTG00005002651)	ENSPCTG00005002662	ACKR1 (ENSPCTG00005002668)	CADM3 (ENSPCTG00005002690)	ENSPCTG00005002719
Odontoceti_a	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.f	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372
Dolphin	MODERN SPECIES	1286				VANGL2 (ENSTTRG00000001841)	NHLH1 (ENSTTRG00000001840)	NCSTN (ENSTTRG00000001839)	COPA (ENSTTRG00000001838)	PEX19 (ENSTTRG00000001837)	DCAF8 (ENSTTRG00000001836)	PEA15 (ENSTTRG00000001834)	CASQ1 (ENSTTRG00000001832)	ATP1A4 (ENSTTRG00000001830)	ATP1A2 (ENSTTRG00000001826)	ENSTTRG00000001825	KCNJ9 (ENSTTRG00000001824) ##18	KCNJ10 (ENSTTRG00000001823) ##22	PIGM (ENSTTRG00000001822)	SLAMF9 (ENSTTRG00000001820)	IGSF9 (ENSTTRG00000001816)	TAGLN2 (ENSTTRG00000001814)	CFAP45 (ENSTTRG00000001811)	VSIG8 (ENSTTRG00000001806)	SLAMF8 (ENSTTRG00000001802)	FCRL6 (ENSTTRG00000001796)	DUSP23 (ENSTTRG00000001792)
Odontoceti_b	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.f	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372	ENSGT00940000159779
Vaquita	MODERN SPECIES		CD48 (ENSPSNG00000007736)	CD84 (ENSPSNG00000007221)	SLAMF6 (ENSPSNG00000007039)	VANGL2 (ENSPSNG00000006972)	NHLH1 (ENSPSNG00000006949)	NCSTN (ENSPSNG00000006871)	COPA (ENSPSNG00000006757)	PEX19 (ENSPSNG00000006703)	DCAF8 (ENSPSNG00000006671)	PEA15 (ENSPSNG00000006605)	CASQ1 (ENSPSNG00000006557)	ENSPSNG00000006503	ATP1A2 (ENSPSNG00000006326)	IGSF8 (ENSPSNG00000006251)	KCNJ9 (ENSPSNG00000006225) ##18	ENSPSNG00000004867 ##22	PIGM (ENSPSNG00000004852)	IGSF9 (ENSPSNG00000004742)	ENSPSNG00000004669	CFAP45 (ENSPSNG00000004612)	VSIG8 (ENSPSNG00000004567)	SLAMF8 (ENSPSNG00000004532)	DUSP23 (ENSPSNG00000004441)	ENSPSNG00000004365	FCER1A (ENSPSNG00000004310)	ACKR1 (ENSPSNG00000004282)	CADM3 (ENSPSNG00000004231)	ENSPSNG00000004192	SPTA1 (ENSPSNG00000004105)	ENSPSNG00000004080	OR10K2 (ENSPSNG00000004071)
Monodontidae	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.f	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372	ENSGT00940000159779
Beluga whale	MODERN SPECIES	69	ENSDLEG00000013903	VANGL2 (ENSDLEG00000013884)	NHLH1 (ENSDLEG00000013875)	NCSTN (ENSDLEG00000013787)	COPA (ENSDLEG00000013742)	PEX19 (ENSDLEG00000013728)	DCAF8 (ENSDLEG00000013688)	PEA15 (ENSDLEG00000013677)	CASQ1 (ENSDLEG00000013665)	ENSDLEG00000013623	ATP1A2 (ENSDLEG00000013584)	IGSF8 (ENSDLEG00000013569)	KCNJ9 (ENSDLEG00000013552) ##18	ENSDLEG00000013536	ENSDLEG00000013525	KCNJ10 (ENSDLEG00000013520) ##22	PIGM (ENSDLEG00000013517)	SLAMF9 (ENSDLEG00000013501)	IGSF9 (ENSDLEG00000013172)	TAGLN2 (ENSDLEG00000013111)	CFAP45 (ENSDLEG00000012985)	VSIG8 (ENSDLEG00000012956)	SLAMF8 (ENSDLEG00000012945)	ENSDLEG00000012937	DUSP23 (ENSDLEG00000012930)	CRP (ENSDLEG00000012922)	ENSDLEG00000012913	OR10J3 (ENSDLEG00000012609)	FCER1A (ENSDLEG00000012546)	ACKR1 (ENSDLEG00000012535)	CADM3 (ENSDLEG00000012524)
Narwhal	MODERN SPECIES	304	SLAMF6 (ENSMMNG00015006272)	VANGL2 (ENSMMNG00015006293)	NHLH1 (ENSMMNG00015006304)	NCSTN (ENSMMNG00015006332)	COPA (ENSMMNG00015006396)	PEX19 (ENSMMNG00015006423)	DCAF8 (ENSMMNG00015006457)	PEA15 (ENSMMNG00015006493)	CASQ1 (ENSMMNG00015006517)	ENSMMNG00015006546	ENSMMNG00015006573	ATP1A2 (ENSMMNG00015006635)	IGSF8 (ENSMMNG00015006711)	KCNJ9 (ENSMMNG00015006736) ##18	ENSMMNG00015006748	ENSMMNG00015006763 ##22	PIGM (ENSMMNG00015006781)	IGSF9 (ENSMMNG00015006847)	ENSMMNG00015006924	CFAP45 (ENSMMNG00015006950)	ENSMMNG00015006980	VSIG8 (ENSMMNG00015006991)	SLAMF8 (ENSMMNG00015007077)	DUSP23 (ENSMMNG00015007102)	ENSMMNG00015007120	ENSMMNG00015007145	ENSMMNG00015007164	OR10J3 (ENSMMNG00015007198)	FCER1A (ENSMMNG00015007254)	ACKR1 (ENSMMNG00015007285)	CADM3 (ENSMMNG00015007305)
Pecora	ANCESTRAL SPECIES	2	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000169892	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113
Yarkand deer	MODERN SPECIES	12	CD48 (ENSCHYG00000010705)	SLAMF1 (ENSCHYG00000010781)	ENSCHYG00000010884	VANGL2 (ENSCHYG00000011176)	NHLH1 (ENSCHYG00000011250)	NCSTN (ENSCHYG00000011288)	COPA (ENSCHYG00000011615)	PEX19 (ENSCHYG00000012257)	DCAF8 (ENSCHYG00000012441)	PEA15 (ENSCHYG00000012533)	CASQ1 (ENSCHYG00000012589)	ATP1A4 (ENSCHYG00000012705)	IGSF8 (ENSCHYG00000013238)	KCNJ9 (ENSCHYG00000013360) ##18	ENSCHYG00000013386	ENSCHYG00000013430 ##22	PIGM (ENSCHYG00000013484)	SLAMF9 (ENSCHYG00000013521)	IGSF9 (ENSCHYG00000013599)	ENSCHYG00000014020	CFAP45 (ENSCHYG00000014106)	VSIG8 (ENSCHYG00000014335)	SLAMF8 (ENSCHYG00000014485)	FCRL6 (ENSCHYG00000014572)	CRP (ENSCHYG00000014795)	ENSCHYG00000014886	ENSCHYG00000014929	APCS (ENSCHYG00000015004)	OR10J5 (ENSCHYG00000015044)	OR10J1 (ENSCHYG00000015068)	ENSCHYG00000015115
Percora_a	ANCESTRAL SPECIES	1	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Siberian musk deer	MODERN SPECIES	1202	SLAMF1 (ENSMMSG00000021747)	CD84 (ENSMMSG00000021783)	ENSMMSG00000021857	VANGL2 (ENSMMSG00000021907)	NHLH1 (ENSMMSG00000021925)	NCSTN (ENSMMSG00000021937)	COPA (ENSMMSG00000022003)	PEX19 (ENSMMSG00000022261)	DCAF8 (ENSMMSG00000022274)	PEA15 (ENSMMSG00000022299)	CASQ1 (ENSMMSG00000022317)	ATP1A4 (ENSMMSG00000022343)	ATP1A2 (ENSMMSG00000022405)	IGSF8 (ENSMMSG00000022434)	KCNJ9 (ENSMMSG00000022446) ##18	ENSMMSG00000022453 ##22	PIGM (ENSMMSG00000022464)	SLAMF9 (ENSMMSG00000022472)	IGSF9 (ENSMMSG00000022490)	ENSMMSG00000022522	CFAP45 (ENSMMSG00000022539)	VSIG8 (ENSMMSG00000022583)	SLAMF8 (ENSMMSG00000022599)	FCRL6 (ENSMMSG00000022621)	DUSP23 (ENSMMSG00000022636)	CRP (ENSMMSG00000022649)	APCS (ENSMMSG00000022674)	OR10J5 (ENSMMSG00000017905)	OR10J1 (ENSMMSG00000017920)	ENSMMSG00000017939	OR10J3 (ENSMMSG00000017973)
Bovidae	ANCESTRAL SPECIES	1	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Bovinae	ANCESTRAL SPECIES	1	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
American bison	MODERN SPECIES	3157	ENSBBBG00000020600	ENSBBBG00000020656	VANGL2 (ENSBBBG00000020686)	NHLH1 (ENSBBBG00000020690)	NCSTN (ENSBBBG00000020706)	COPA (ENSBBBG00000020835)	PEX19 (ENSBBBG00000020850)	DCAF8 (ENSBBBG00000020895)	PEA15 (ENSBBBG00000020908)	CASQ1 (ENSBBBG00000020931)	ATP1A4 (ENSBBBG00000020982)	ATP1A2 (ENSBBBG00000021037)	IGSF8 (ENSBBBG00000021074)	KCNJ9 (ENSBBBG00000008179) ##18	ENSBBBG00000021084	KCNJ10 (ENSBBBG00000021092) ##22	PIGM (ENSBBBG00000007328)	SLAMF9 (ENSBBBG00000021116)	IGSF9 (ENSBBBG00000021170)	ENSBBBG00000021186	CFAP45 (ENSBBBG00000021204)	VSIG8 (ENSBBBG00000007017)	ENSBBBG00000021221	ENSBBBG00000021226	DUSP23 (ENSBBBG00000021239)	CRP (ENSBBBG00000005680)	APCS (ENSBBBG00000021254)	OR10J5 (ENSBBBG00000005683)	OR10J1 (ENSBBBG00000005685)	ENSBBBG00000021266	OR10J3 (ENSBBBG00000021271)
Bos	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451.g	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Bos_b	ANCESTRAL SPECIES	1	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.b.a.b.a.b.a.b.a	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451.g	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00960000190682	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113
Hybrid Bos Indicus	MODERN SPECIES	22	ENSBIXG00005018113	ENSBIXG00005018088	VANGL2 (ENSBIXG00005018079)	NHLH1 (ENSBIXG00005018063)	NCSTN (ENSBIXG00005007052)	ENSBIXG00005017997	PEX19 (ENSBIXG00005017952)	DCAF8 (ENSBIXG00005017894)	ATP1A2 (ENSBIXG00005006363)	ENSBIXG00005017726	PEA15 (ENSBIXG00005017709)	CASQ1 (ENSBIXG00005002872)	ATP1A4 (ENSBIXG00005017644)	KCNJ9 (ENSBIXG00005017542) ##18	IGSF8 (ENSBIXG00005002843)	KCNJ10 (ENSBIXG00005017473) ##22	ENSBIXG00005017448	PIGM (ENSBIXG00005017436)	SLAMF9 (ENSBIXG00005017409)	IGSF9 (ENSBIXG00005017383)	ENSBIXG00005017333	CFAP45 (ENSBIXG00005017272)	VSIG8 (ENSBIXG00005007559)	SLAMF8 (ENSBIXG00005017188)	FCRL6 (ENSBIXG00005017159)	DUSP23 (ENSBIXG00005006864)	ENSBIXG00005017121	CRP (ENSBIXG00005017082)	APCS (ENSBIXG00005017069)	OR10J5 (ENSBIXG00005017053)	OR10J1 (ENSBIXG00005017037)
Cow	MODERN SPECIES	22	ENSBTAG00000051438	CD84 (ENSBTAG00000019033)	SLAMF6 (ENSBTAG00000014368)	ENSBTAG00000015741	VANGL2 (ENSBTAG00000006560)	NCSTN (ENSBTAG00000004334)	COPA (ENSBTAG00000004333)	PEX19 (ENSBTAG00000007537)	DCAF8 (ENSBTAG00000005796)	PEA15 (ENSBTAG00000005793)	CASQ1 (ENSBTAG00000020223)	ATP1A4 (ENSBTAG00000038523)	ATP1A2 (ENSBTAG00000010551)	IGSF8 (ENSBTAG00000009982)	KCNJ9 (ENSBTAG00000024507) ##18	KCNJ10 (ENSBTAG00000002414) ##22	ENSBTAG00000052815	PIGM (ENSBTAG00000002419)	SLAMF9 (ENSBTAG00000007241)	IGSF9 (ENSBTAG00000001481)	TAGLN2 (ENSBTAG00000002068)	CFAP45 (ENSBTAG00000018487)	VSIG8 (ENSBTAG00000010670)	SLAMF8 (ENSBTAG00000016698)	FCRL6 (ENSBTAG00000017786)	DUSP23 (ENSBTAG00000004776)	CRP (ENSBTAG00000013907)	APCS (ENSBTAG00000019616)	OR10J5 (ENSBTAG00000019038)	OR10J1 (ENSBTAG00000054704)	OR10J4 (ENSBTAG00000019618)
Bos_a	ANCESTRAL SPECIES	27	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451.g	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00960000190682	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Domestic yak	MODERN SPECIES	22	ENSBGRG00000000226	ENSBGRG00000000219	VANGL2 (ENSBGRG00000000209)	NHLH1 (ENSBGRG00000000190)	NCSTN (ENSBGRG00000017046)	ENSBGRG00000015754	PEX19 (ENSBGRG00000015679)	DCAF8 (ENSBGRG00000015515)	PEA15 (ENSBGRG00000015431)	CASQ1 (ENSBGRG00000015278)	ATP1A4 (ENSBGRG00000014914)	ATP1A2 (ENSBGRG00000014422)	IGSF8 (ENSBGRG00000014336)	KCNJ9 (ENSBGRG00000014272) ##18	ENSBGRG00000014217	ENSBGRG00000014154 ##22	PIGM (ENSBGRG00000014127)	SLAMF9 (ENSBGRG00000014099)	IGSF9 (ENSBGRG00000013549)	TAGLN2 (ENSBGRG00000013398)	CFAP45 (ENSBGRG00000013191)	VSIG8 (ENSBGRG00000013076)	SLAMF8 (ENSBGRG00000012927)	FCRL6 (ENSBGRG00000012845)	DUSP23 (ENSBGRG00000012802)	CRP (ENSBGRG00000012746)	APCS (ENSBGRG00000012713)	OR10J5 (ENSBGRG00000012702)	OR10J1 (ENSBGRG00000012668)	OR10J4 (ENSBGRG00000012658)	ENSBGRG00000012593
Wild yak	MODERN SPECIES	1577	ENSBMUG00000013514	ENSBMUG00000013492	VANGL2 (ENSBMUG00000013478)	NHLH1 (ENSBMUG00000013460)	NCSTN (ENSBMUG00000013434)	COPA (ENSBMUG00000013396)	PEX19 (ENSBMUG00000013324)	DCAF8 (ENSBMUG00000013304)	PEA15 (ENSBMUG00000013240)	CASQ1 (ENSBMUG00000013224)	ATP1A4 (ENSBMUG00000013197)	ATP1A2 (ENSBMUG00000013176)	IGSF8 (ENSBMUG00000013132)	KCNJ9 (ENSBMUG00000013117) ##18	ENSBMUG00000013094	ENSBMUG00000013082 ##22	PIGM (ENSBMUG00000013064)
Caprinae	ANCESTRAL SPECIES	2	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230.d	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.g.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Goat	MODERN SPECIES	22	SLAMF1 (ENSCHIG00000009511)	CD84 (ENSCHIG00000020076)	ENSCHIG00000024954	VANGL2 (ENSCHIG00000015925)	NHLH1 (ENSCHIG00000012209)	NCSTN (ENSCHIG00000027206)	COPA (ENSCHIG00000015090)	PEX19 (ENSCHIG00000013347)	DCAF8 (ENSCHIG00000021038)	ENSCHIG00000024136	CASQ1 (ENSCHIG00000006481)	ATP1A4 (ENSCHIG00000024568)	ATP1A2 (ENSCHIG00000026690)	IGSF8 (ENSCHIG00000010633)	KCNJ9 (ENSCHIG00000019813) ##18	KCNJ10 (ENSCHIG00000001309) ##22	PIGM (ENSCHIG00000006611)	SLAMF9 (ENSCHIG00000021051)	IGSF9 (ENSCHIG00000016643)	ENSCHIG00000027263	CFAP45 (ENSCHIG00000016971)	VSIG8 (ENSCHIG00000015221)	SLAMF8 (ENSCHIG00000017503)	ENSCHIG00000026962	DUSP23 (ENSCHIG00000014450)	CRP (ENSCHIG00000015232)	APCS (ENSCHIG00000026603)	OR10J5 (ENSCHIG00000005144)	ENSCHIG00000011325	ENSCHIG00000017998	OR10J3 (ENSCHIG00000023434)
Rambouillet Sheep	MODERN SPECIES		SLAMF1 (ENSOARG00020016678)	ENSOARG00020016648	ENSOARG00020016635	ENSOARG00020016590	ENSOARG00020016265	VANGL2 (ENSOARG00020016183)	NCSTN (ENSOARG00020016078)	COPA (ENSOARG00020015719)	PEX19 (ENSOARG00020015654)	DCAF8 (ENSOARG00020015535)	ENSOARG00020015426	CASQ1 (ENSOARG00020015333)	ATP1A2 (ENSOARG00020012599)	IGSF8 (ENSOARG00020012420)	KCNJ9 (ENSOARG00020012322) ##18	ENSOARG00020012253 ##22	PIGM (ENSOARG00020012224)	SLAMF9 (ENSOARG00020012175)	IGSF9 (ENSOARG00020011725)	TAGLN2 (ENSOARG00020011575)	CFAP45 (ENSOARG00020011195)	VSIG8 (ENSOARG00020011063)	FCRL6 (ENSOARG00020009962)	DUSP23 (ENSOARG00020009880)	CRP (ENSOARG00020009837)	ENSOARG00020009752	ENSOARG00020009707	ENSOARG00020009667	OR10J1 (ENSOARG00020009631)	OR10J4 (ENSOARG00020009614)	ENSOARG00020009605
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Carnivora	ANCESTRAL SPECIES	14	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Caniformia	ANCESTRAL SPECIES	10	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Mustelinae	ANCESTRAL SPECIES	23	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A
Ferret	MODERN SPECIES	385	SLAMF1 (ENSMPUG00000014155)	CD84 (ENSMPUG00000014153)	ENSMPUG00000014124	VANGL2 (ENSMPUG00000014115)	NHLH1 (ENSMPUG00000019473)	NCSTN (ENSMPUG00000014107)	COPA (ENSMPUG00000013955)	PEX19 (ENSMPUG00000013953)	DCAF8 (ENSMPUG00000013949)	PEA15 (ENSMPUG00000013933)	CASQ1 (ENSMPUG00000013930)	ATP1A4 (ENSMPUG00000013901)	ATP1A2 (ENSMPUG00000013193)	IGSF8 (ENSMPUG00000013188)	KCNJ9 (ENSMPUG00000013180) ##18	KCNJ10 (ENSMPUG00000019472) ##22	SLAMF9 (ENSMPUG00000013175)	ENSMPUG00000019471	IGSF9 (ENSMPUG00000013170)	ENSMPUG00000013160	CFAP45 (ENSMPUG00000013148)	VSIG8 (ENSMPUG00000013132)	SLAMF8 (ENSMPUG00000013124)	CRP (ENSMPUG00000013109)	APCS (ENSMPUG00000013103)	OR10J1 (ENSMPUG00000019470)	OR10J4 (ENSMPUG00000019469)	ENSMPUG00000019468	OR10J3 (ENSMPUG00000019467)	ENSMPUG00000013100	ENSMPUG00000019466
American mink	MODERN SPECIES	260	CD48 (ENSNVIG00000000982)	SLAMF1 (ENSNVIG00000000955)	CD84 (ENSNVIG00000000870)	ENSNVIG00000000854	VANGL2 (ENSNVIG00000000843)	NHLH1 (ENSNVIG00000000835)	NCSTN (ENSNVIG00000000782)	COPA (ENSNVIG00000000650)	E9PBB3 (ENSNVIG00000000594)	DCAF8 (ENSNVIG00000000533)	PEA15 (ENSNVIG00000000508)	ENSNVIG00000000494	ATP1A4 (ENSNVIG00000000458)	ATP1A2 (ENSNVIG00000000411)	IGSF8 (ENSNVIG00000000372)	ENSNVIG00000000363 ##22	SLAMF9 (ENSNVIG00000000354)	IGSF9 (ENSNVIG00000000270)	ENSNVIG00000000250	CFAP45 (ENSNVIG00000000220)	VSIG8 (ENSNVIG00000000205)	SLAMF8 (ENSNVIG00000000175)	ENSNVIG00000000171	ENSNVIG00000000167	APCS (ENSNVIG00000000162)	OR10J5 (ENSNVIG00000000158)	OR10J1 (ENSNVIG00000000153)	OR10J4 (ENSNVIG00000000142)	ENSNVIG00000000136	OR10J3 (ENSNVIG00000000132)	FCER1A (ENSNVIG00000000084)
Ursidae	ANCESTRAL SPECIES	4	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000163654
Giant Panda	MODERN SPECIES	18	ENSAMEG00000014087	SLAMF7 (ENSAMEG00000014088)	ENSAMEG00000014105	SLAMF1 (ENSAMEG00000014106)	ENSAMEG00000014133	VANGL2 (ENSAMEG00000024426)	NHLH1 (ENSAMEG00000018487)	NCSTN (ENSAMEG00000014176)	COPA (ENSAMEG00000014216)	PEX19 (ENSAMEG00000028645)	DCAF8 (ENSAMEG00000014293)	PEA15 (ENSAMEG00000014346)	ENSAMEG00000014164	ATP1A2 (ENSAMEG00000013987)	ENSAMEG00000013980	ENSAMEG00000023557 ##22	ENSAMEG00000013971	IGSF9 (ENSAMEG00000013950)	ENSAMEG00000013938	CFAP45 (ENSAMEG00000009487)	VSIG8 (ENSAMEG00000009481)	SLAMF8 (ENSAMEG00000009477)	FCRL6 (ENSAMEG00000009469)	ENSAMEG00000030785	CRP (ENSAMEG00000024961)	ENSAMEG00000015684	APCS (ENSAMEG00000024563)	ENSAMEG00000019527	OR10J4 (ENSAMEG00000015694)	FCER1A (ENSAMEG00000004132)	ENSAMEG00000018629
Ursus	ANCESTRAL SPECIES	112	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00860000136134.a	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b
American black bear	MODERN SPECIES	290															KCNJ9 (ENSUAMG00000012183) ##18	KCNJ10 (ENSUAMG00000012181) ##22	PIGM (ENSUAMG00000012180)	SLAMF9 (ENSUAMG00000012178)	ENSUAMG00000012175	ENSUAMG00000012174	TAGLN2 (ENSUAMG00000012172)	CFAP45 (ENSUAMG00000012168)	VSIG8 (ENSUAMG00000012164)	SLAMF8 (ENSUAMG00000012163)	ENSUAMG00000012161	DUSP23 (ENSUAMG00000012160)	CRP (ENSUAMG00000012159)
Polar bear	MODERN SPECIES	226	CD48 (ENSUMAG00000000250)	SLAMF1 (ENSUMAG00000000287)	CD84 (ENSUMAG00000000293)	ENSUMAG00000000317	VANGL2 (ENSUMAG00000000362)	NCSTN (ENSUMAG00000000489)	COPA (ENSUMAG00000000502)	PEX19 (ENSUMAG00000000514)	DCAF8 (ENSUMAG00000000545)	ENSUMAG00000000703	PEA15 (ENSUMAG00000000717)	CASQ1 (ENSUMAG00000000727)	ATP1A4 (ENSUMAG00000000818)	ATP1A2 (ENSUMAG00000001114)	IGSF8 (ENSUMAG00000001297)	ENSUMAG00000001341 ##22	SLAMF9 (ENSUMAG00000001377)	ENSUMAG00000001419	ENSUMAG00000001465	TAGLN2 (ENSUMAG00000001472)	CFAP45 (ENSUMAG00000001486)	VSIG8 (ENSUMAG00000001569)	SLAMF8 (ENSUMAG00000001576)	FCRL6 (ENSUMAG00000001583)	ENSUMAG00000001588	ENSUMAG00000001644	APCS (ENSUMAG00000001661)	OR10J5 (ENSUMAG00000001706)	OR10J4 (ENSUMAG00000001718)	ENSUMAG00000001730	ENSUMAG00000001741
Canidae	ANCESTRAL SPECIES	36	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444.a	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870
Red fox	MODERN SPECIES	219	CD48 (ENSVVUG00000016006)	SLAMF1 (ENSVVUG00000016019)	CD84 (ENSVVUG00000016029)	ENSVVUG00000016036	VANGL2 (ENSVVUG00000016054)	NHLH1 (ENSVVUG00000016092)	NCSTN (ENSVVUG00000016095)	COPA (ENSVVUG00000016104)	PEX19 (ENSVVUG00000016118)	DCAF8 (ENSVVUG00000016128)	PEA15 (ENSVVUG00000016136)	CASQ1 (ENSVVUG00000016139)	ATP1A4 (ENSVVUG00000016182)	IGSF8 (ENSVVUG00000016245)	KCNJ9 (ENSVVUG00000016255) ##18	KCNJ10 (ENSVVUG00000016261) ##22	PIGM (ENSVVUG00000016270)	SLAMF9 (ENSVVUG00000016282)	ENSVVUG00000016286	ENSVVUG00000016298	TAGLN2 (ENSVVUG00000016302)	CFAP45 (ENSVVUG00000016307)	VSIG8 (ENSVVUG00000016314)	SLAMF8 (ENSVVUG00000016330)	ENSVVUG00000016335	DUSP23 (ENSVVUG00000016337)	CRP (ENSVVUG00000016340)	ENSVVUG00000016344	ENSVVUG00000016358	ENSVVUG00000016363	ENSVVUG00000016370
Canis_lupus	ANCESTRAL SPECIES	33	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00980000203141	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444.a	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00940000159272.B	ENSGT00940000165113	ENSGT00940000163968	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A
Dog	MODERN SPECIES	31	SLAMF1 (ENSCAFG00845030320)	CD84 (ENSCAFG00845030390)	ENSCAFG00845030449	VANGL2 (ENSCAFG00845030473)	NHLH1 (ENSCAFG00845030493)	NCSTN (ENSCAFG00845030514)	COPA (ENSCAFG00845030600)	PEX19 (ENSCAFG00845030621)	DCAF8 (ENSCAFG00845030652)	ENSCAFG00845030669	PEA15 (ENSCAFG00845030704)	ENSCAFG00845030715	ATP1A4 (ENSCAFG00845030760)	IGSF8 (ENSCAFG00845030820)	KCNJ9 (ENSCAFG00845030853) ##18	KCNJ10 (ENSCAFG00845030876) ##22	PIGM (ENSCAFG00845030888)	SLAMF9 (ENSCAFG00845030895)	IGSF9 (ENSCAFG00845030923)	TAGLN2 (ENSCAFG00845030944)	CFAP45 (ENSCAFG00845030963)	VSIG8 (ENSCAFG00845030977)	SLAMF8 (ENSCAFG00845030981)	FCRL6 (ENSCAFG00845030986)	DUSP23 (ENSCAFG00845030988)	CRP (ENSCAFG00845030990)	OR10J14 (ENSCAFG00845030993)	OR10J5 (ENSCAFG00845030996)	OR10J4 (ENSCAFG00845015233)	ENSCAFG00845015260	FCER1A (ENSCAFG00845015284)
Dingo	MODERN SPECIES	275	SLAMF1 (ENSCAFG00020000318)	CD84 (ENSCAFG00020000119)	VANGL2 (ENSCAFG00020020062)	NHLH1 (ENSCAFG00020020059)	NCSTN (ENSCAFG00020020039)	COPA (ENSCAFG00020020033)	PEX19 (ENSCAFG00020020025)	DCAF8 (ENSCAFG00020020020)	ENSCAFG00020020019	PEA15 (ENSCAFG00020020017)	CASQ1 (ENSCAFG00020019977)	ATP1A4 (ENSCAFG00020019849)	ATP1A2 (ENSCAFG00020019829)	IGSF8 (ENSCAFG00020019825)	KCNJ9 (ENSCAFG00020019821) ##18	KCNJ10 (ENSCAFG00020019817) ##22	PIGM (ENSCAFG00020019816)	SLAMF9 (ENSCAFG00020019812)	IGSF9 (ENSCAFG00020019761)	TAGLN2 (ENSCAFG00020019746)	CFAP45 (ENSCAFG00020019737)	VSIG8 (ENSCAFG00020019727)	ENSCAFG00020019724	ENSCAFG00020019722	DUSP23 (ENSCAFG00020019718)	CRP (ENSCAFG00020019716)	ENSCAFG00020019714	ENSCAFG00020019709	ENSCAFG00020019705	OR10J5 (ENSCAFG00020019704)	FCER1A (ENSCAFG00020019698)
Felidae	ANCESTRAL SPECIES	11	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000162870
Cat	MODERN SPECIES	248	CD48 (ENSFCAG00000046778)	SLAMF1 (ENSFCAG00000003932)	CD84 (ENSFCAG00000003931)	SLAMF6 (ENSFCAG00000037467)	VANGL2 (ENSFCAG00000003929)	NHLH1 (ENSFCAG00000040632)	NCSTN (ENSFCAG00000003928)	COPA (ENSFCAG00000003927)	PEX19 (ENSFCAG00000003926)	DCAF8 (ENSFCAG00000003925)	PEA15 (ENSFCAG00000003924)	CASQ1 (ENSFCAG00000003923)	ATP1A4 (ENSFCAG00000005397)	IGSF8 (ENSFCAG00000003922)	KCNJ9 (ENSFCAG00000015120) ##18	KCNJ10 (ENSFCAG00000043392) ##22	PIGM (ENSFCAG00000008535)	IGSF9 (ENSFCAG00000031301)	TAGLN2 (ENSFCAG00000016255)	CFAP45 (ENSFCAG00000008529)	VSIG8 (ENSFCAG00000008527)	SLAMF8 (ENSFCAG00000008526)	FCRL6 (ENSFCAG00000027611)	DUSP23 (ENSFCAG00000044162)	ENSFCAG00000031034	CRP (ENSFCAG00000029168)	APCS (ENSFCAG00000010503)	OR10J4 (ENSFCAG00000023747)	ENSFCAG00000023051	OR10J3 (ENSFCAG00000029247)	FCER1A (ENSFCAG00000015276)
Panthera	ANCESTRAL SPECIES	32	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00950000183030.m.a.a.b.b.a.b.b.a.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000163654
Tiger	MODERN SPECIES	582														ENSPTIG00000008746	ATP1A2 (ENSPTIG00000008674)	ENSPTIG00000008635 ##22
Panthera_a	ANCESTRAL SPECIES	42	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00950000183030.m.a.a.b.b.a.b.b.a.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT00860000136134.a	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
lion	MODERN SPECIES	17	CD84 (ENSPLOG00000016860)	ENSPLOG00000016985	ENSPLOG00000017013	VANGL2 (ENSPLOG00000017034)	NHLH1 (ENSPLOG00000017093)	NCSTN (ENSPLOG00000017121)	COPA (ENSPLOG00000017328)	PEX19 (ENSPLOG00000018162)	DCAF8 (ENSPLOG00000018207)	PEA15 (ENSPLOG00000018230)	CASQ1 (ENSPLOG00000018283)	ATP1A4 (ENSPLOG00000018403)	ATP1A2 (ENSPLOG00000018633)	IGSF8 (ENSPLOG00000018991)	KCNJ9 (ENSPLOG00000019025) ##18	KCNJ10 (ENSPLOG00000019063) ##22	PIGM (ENSPLOG00000019076)	IGSF9 (ENSPLOG00000019097)	TAGLN2 (ENSPLOG00000019161)	CFAP45 (ENSPLOG00000019212)	VSIG8 (ENSPLOG00000019353)	SLAMF8 (ENSPLOG00000019412)	FCRL6 (ENSPLOG00000019509)	DUSP23 (ENSPLOG00000019652)	ENSPLOG00000019670	APCS (ENSPLOG00000019684)	OR10J5 (ENSPLOG00000019721)	OR10J1 (ENSPLOG00000019739)	OR10J4 (ENSPLOG00000019760)	ENSPLOG00000019790	FCER1A (ENSPLOG00000019860)
leopard	MODERN SPECIES	151	SLAMF1 (ENSPPRG00000002242)	CD84 (ENSPPRG00000003122)	ENSPPRG00000016542	VANGL2 (ENSPPRG00000003734)	NHLH1 (ENSPPRG00000016593)	NCSTN (ENSPPRG00000005450)	COPA (ENSPPRG00000006408)	PEX19 (ENSPPRG00000006491)	DCAF8 (ENSPPRG00000007508)	PEA15 (ENSPPRG00000007830)	CASQ1 (ENSPPRG00000008086)	ATP1A4 (ENSPPRG00000008985)	ATP1A2 (ENSPPRG00000009924)	IGSF8 (ENSPPRG00000010316)	KCNJ9 (ENSPPRG00000010763) ##18	ENSPPRG00000010796 ##22	IGSF9 (ENSPPRG00000014348)	TAGLN2 (ENSPPRG00000015772)	CFAP45 (ENSPPRG00000017256)	VSIG8 (ENSPPRG00000018099)	SLAMF8 (ENSPPRG00000019672)	ENSPPRG00000019982	DUSP23 (ENSPPRG00000022051)	CRP (ENSPPRG00000017530)	OR10J5 (ENSPPRG00000017550)	OR10J1 (ENSPPRG00000017571)	OR10J4 (ENSPPRG00000024602)	ENSPPRG00000017606	ENSPPRG00000017645	ENSPPRG00000023825	ACKR1 (ENSPPRG00000023790)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Chiroptera	ANCESTRAL SPECIES	70	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000163011	ENSGT00940000161240
Microchiroptera	ANCESTRAL SPECIES	22	ENSGT01030000234540.B.a.a.a.b.b.a	ENSGT01030000234540.A.a.b	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000163011	ENSGT00940000161240
Greater horseshoe bat	MODERN SPECIES	14	CD48 (ENSRFEG00010017142)	SLAMF1 (ENSRFEG00010017290)	CD84 (ENSRFEG00010017339)	ENSRFEG00010017614	ENSRFEG00010017644	VANGL2 (ENSRFEG00010017655)	NCSTN (ENSRFEG00010017685)	COPA (ENSRFEG00010017786)	PEX19 (ENSRFEG00010018882)	DCAF8 (ENSRFEG00010018914)	PEA15 (ENSRFEG00010018961)	CASQ1 (ENSRFEG00010019015)	ATP1A2 (ENSRFEG00010019151)	IGSF8 (ENSRFEG00010019196)	KCNJ9 (ENSRFEG00010019225) ##18	KCNJ10 (ENSRFEG00010019242) ##22	PIGM (ENSRFEG00010019250)	SLAMF9 (ENSRFEG00010019266)	IGSF9 (ENSRFEG00010019302)	TAGLN2 (ENSRFEG00010019400)	CFAP45 (ENSRFEG00010019459)	VSIG8 (ENSRFEG00010019604)	DUSP23 (ENSRFEG00010020089)	FCER1A (ENSRFEG00010020109)	ACKR1 (ENSRFEG00010020121)	CADM3 (ENSRFEG00010020150)	SPTA1 (ENSRFEG00010020243)	CD1E (ENSRFEG00010020314)	CD1B (ENSRFEG00010020359)	CD1C (ENSRFEG00010020380)	ENSRFEG00010020419
Microbat	MODERN SPECIES	1127	BTG2 (ENSMLUG00000005972)	SLAMF7 (ENSMLUG00000005966)	ENSMLUG00000014217	SLAMF1 (ENSMLUG00000014214)	CD84 (ENSMLUG00000002828)	ENSMLUG00000002817	VANGL2 (ENSMLUG00000002804)	NCSTN (ENSMLUG00000001333)	COPA (ENSMLUG00000001304)	DCAF8 (ENSMLUG00000001281)	PEA15 (ENSMLUG00000001275)	CASQ1 (ENSMLUG00000001266)	ENSMLUG00000001256	IGSF8 (ENSMLUG00000028383)	KCNJ9 (ENSMLUG00000001233) ##18	KCNJ10 (ENSMLUG00000001230) ##22	PIGM (ENSMLUG00000001228)	SLAMF9 (ENSMLUG00000023838)	IGSF9 (ENSMLUG00000024953)	ENSMLUG00000026228	CFAP45 (ENSMLUG00000006282)	VSIG8 (ENSMLUG00000006280)	SLAMF8 (ENSMLUG00000014725)	DUSP23 (ENSMLUG00000016146)	ENSMLUG00000026505	OR10J3 (ENSMLUG00000009746)	FCER1A (ENSMLUG00000009715)	ENSMLUG00000009704	ACKR1 (ENSMLUG00000024152)	CADM3 (ENSMLUG00000009639)	OR6K6 (ENSMLUG00000002553)
Megabat	MODERN SPECIES	1046					VANGL2 (ENSPVAG00000007988)	NHLH1 (ENSPVAG00000007987)	NCSTN (ENSPVAG00000007986)	COPA (ENSPVAG00000007985)	PEX19 (ENSPVAG00000007984)	DCAF8 (ENSPVAG00000007982)	CASQ1 (ENSPVAG00000007981)	ATP1A4 (ENSPVAG00000007976)	ATP1A2 (ENSPVAG00000007973)	ENSPVAG00000007971	KCNJ9 (ENSPVAG00000007969) ##18	KCNJ10 (ENSPVAG00000007965) ##22	PIGM (ENSPVAG00000007964)
Equus	ANCESTRAL SPECIES	3	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Donkey	MODERN SPECIES	17	SLAMF1 (ENSEASG00005002409)	CD84 (ENSEASG00005002413)	SLAMF6 (ENSEASG00005002420)	VANGL2 (ENSEASG00005002424)	NHLH1 (ENSEASG00005030018)	NCSTN (ENSEASG00005002431)	COPA (ENSEASG00005002440)	PEX19 (ENSEASG00005002453)	DCAF8 (ENSEASG00005002491)	PEA15 (ENSEASG00005002499)	CASQ1 (ENSEASG00005002508)	ATP1A4 (ENSEASG00005002539)	ATP1A2 (ENSEASG00005002641)	IGSF8 (ENSEASG00005003188)	KCNJ9 (ENSEASG00005003190) ##18	KCNJ10 (ENSEASG00005029215) ##22	PIGM (ENSEASG00005003195)	ENSEASG00005003200	SLAMF9 (ENSEASG00005003205)	IGSF9 (ENSEASG00005003211)	TAGLN2 (ENSEASG00005003221)	CFAP45 (ENSEASG00005003225)	VSIG8 (ENSEASG00005003234)	SLAMF8 (ENSEASG00005003238)	FCRL6 (ENSEASG00005033326)	DUSP23 (ENSEASG00005027029)	CRP (ENSEASG00005033075)	APCS (ENSEASG00005003250)	OR10J5 (ENSEASG00005003258)	OR10J1 (ENSEASG00005003259)	OR10J4 (ENSEASG00005003261)
Horse	MODERN SPECIES	26	SLAMF1 (ENSECAG00000014369)	CD84 (ENSECAG00000020491)	SLAMF6 (ENSECAG00000021098)	VANGL2 (ENSECAG00000021594)	NHLH1 (ENSECAG00000004612)	NCSTN (ENSECAG00000009183)	COPA (ENSECAG00000021818)	PEX19 (ENSECAG00000053736)	DCAF8 (ENSECAG00000007978)	PEA15 (ENSECAG00000019187)	CASQ1 (ENSECAG00000019807)	ATP1A4 (ENSECAG00000024542)	ATP1A2 (ENSECAG00000024827)	IGSF8 (ENSECAG00000022195)	KCNJ9 (ENSECAG00000030879) ##18	KCNJ10 (ENSECAG00000058067) ##22	PIGM (ENSECAG00000058392)	SLAMF9 (ENSECAG00000022218)	IGSF9 (ENSECAG00000023765)	CFAP45 (ENSECAG00000014880)	TAGLN2 (ENSECAG00000010107)	SLAMF8 (ENSECAG00000023720)	FCRL6 (ENSECAG00000024610)	CRP (ENSECAG00000024874)	DUSP23 (ENSECAG00000024776)	ENSECAG00000046419	ENSECAG00000051429	OR10J1 (ENSECAG00000040571)	OR10J4 (ENSECAG00000054331)	OR10J2 (ENSECAG00000034321)	OR10J7 (ENSECAG00000005575)
Euarchontoglires	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Tree shrew	MODERN SPECIES	8323																KCNJ10 (ENSTBEG00000006913) ##22	PIGM (ENSTBEG00000006731)	SLAMF9 (ENSTBEG00000006493)
Glires	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Rabbit	MODERN SPECIES	4	CD84 (ENSOCUG00000009311)	ENSOCUG00000026792	ENSOCUG00000038841	VANGL2 (ENSOCUG00000016671)	NHLH1 (ENSOCUG00000022024)	NCSTN (ENSOCUG00000014503)	COPA (ENSOCUG00000014479)	PEX19 (ENSOCUG00000014473)	DCAF8 (ENSOCUG00000017692)	PEA15 (ENSOCUG00000017688)	CASQ1 (ENSOCUG00000009959)	ATP1A4 (ENSOCUG00000029185)	ATP1A2 (ENSOCUG00000017667)	IGSF8 (ENSOCUG00000023058)	KCNJ9 (ENSOCUG00000038517) ##18	KCNJ10 (ENSOCUG00000011928) ##22	PIGM (ENSOCUG00000015291)	ENSOCUG00000027503	SLAMF9 (ENSOCUG00000002366)	IGSF9 (ENSOCUG00000002356)	TAGLN2 (ENSOCUG00000022296)	CFAP45 (ENSOCUG00000002349)	VSIG8 (ENSOCUG00000002342)	SLAMF8 (ENSOCUG00000002338)	ENSOCUG00000021578	DUSP23 (ENSOCUG00000015831)	CRP (ENSOCUG00000004702)	APCS (ENSOCUG00000014365)	OR10J5 (ENSOCUG00000011962)	ENSOCUG00000021322	OR10J1 (ENSOCUG00000000350)
Rodentia	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Rodentia_B	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870
Kangaroo rat	MODERN SPECIES	450	Slamf1 (ENSDORG00000007764)	ENSDORG00000013951	Vangl2 (ENSDORG00000009607)	Nhlh1 (ENSDORG00000003184)	Ncstn (ENSDORG00000003182)	Copa (ENSDORG00000003178)	Pex19 (ENSDORG00000003177)	Dcaf8 (ENSDORG00000025872)	Pea15a (ENSDORG00000025879)	Casq1 (ENSDORG00000013062)	ENSDORG00000026888	ENSDORG00000023846	Atp1a2 (ENSDORG00000025124)	Igsf8 (ENSDORG00000007975)	Kcnj9 (ENSDORG00000026272) ##18	Kcnj10 (ENSDORG00000011681) ##22	Pigm (ENSDORG00000011680)	Igsf9 (ENSDORG00000010846)	Tagln2 (ENSDORG00000010844)	Cfap45 (ENSDORG00000010843)	Vsig8 (ENSDORG00000009694)	Slamf8 (ENSDORG00000003126)	Dusp23 (ENSDORG00000025635)	Crp (ENSDORG00000003120)	Apcs (ENSDORG00000005557)	ENSDORG00000008016	ENSDORG00000026308	ENSDORG00000006655	Ackr1 (ENSDORG00000007815)	Cadm3 (ENSDORG00000007812)	ENSDORG00000025844
Myomorpha	ANCESTRAL SPECIES	16	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870
Lesser Egyptian jerboa	MODERN SPECIES	199	Cd48 (ENSJJAG00000000979)	Slamf1 (ENSJJAG00000000565)	Cd84 (ENSJJAG00000022708)	Vangl2 (ENSJJAG00000020626)	Nhlh1 (ENSJJAG00000012911)	Ncstn (ENSJJAG00000020273)	Copa (ENSJJAG00000023590)	Pex19 (ENSJJAG00000022158)	Dcaf8 (ENSJJAG00000018554)	ENSJJAG00000022629	Casq1 (ENSJJAG00000022031)	Atp1a4 (ENSJJAG00000018895)	Atp1a2 (ENSJJAG00000017505)	Igsf8 (ENSJJAG00000009719)	Kcnj9 (ENSJJAG00000000650) ##18	Kcnj10 (ENSJJAG00000000220) ##22	Pigm (ENSJJAG00000013216)	Slamf9 (ENSJJAG00000017960)	Igsf9 (ENSJJAG00000016571)	Tagln2 (ENSJJAG00000013181)	Cfap45 (ENSJJAG00000012021)	Vsig8 (ENSJJAG00000011307)	Slamf8 (ENSJJAG00000010665)	Dusp23 (ENSJJAG00000009910)	Crp (ENSJJAG00000003997)	Apcs (ENSJJAG00000013862)	ENSJJAG00000013735	Fcer1a (ENSJJAG00000003143)	Ackr1 (ENSJJAG00000022885)	Cadm3 (ENSJJAG00000022014)	Aim2 (ENSJJAG00000019224)
Muroidea	ANCESTRAL SPECIES	9	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870
Upper Galilee mountains blind mole rat	MODERN SPECIES	1119	Cd48 (ENSNGAG00000010509)	Slamf1 (ENSNGAG00000014702)	ENSNGAG00000009193	Slamf6 (ENSNGAG00000020830)	Vangl2 (ENSNGAG00000011084)	Nhlh1 (ENSNGAG00000017587)	Ncstn (ENSNGAG00000022047)	Copa (ENSNGAG00000014690)	Pex19 (ENSNGAG00000021061)	Dcaf8 (ENSNGAG00000015830)	Pea15a (ENSNGAG00000008317)	Casq1 (ENSNGAG00000011364)	Atp1a2 (ENSNGAG00000018905)	Igsf8 (ENSNGAG00000016168)	Kcnj9 (ENSNGAG00000020566) ##18	Kcnj10 (ENSNGAG00000020981) ##22	Igsf9 (ENSNGAG00000014249)	Tagln2 (ENSNGAG00000000484)	Cfap45 (ENSNGAG00000001181)	Vsig8 (ENSNGAG00000008436)	Slamf8 (ENSNGAG00000018862)	Dusp23 (ENSNGAG00000000743)	Crp (ENSNGAG00000020190)	Fcer1a (ENSNGAG00000013961)	ENSNGAG00000000474	ENSNGAG00000000729	Ackr1 (ENSNGAG00000001707)	Cadm3 (ENSNGAG00000005609)	Aim2 (ENSNGAG00000017033)	ENSNGAG00000019400	ENSNGAG00000011188
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870.c
Cricetidae	ANCESTRAL SPECIES	13	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870.c
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870.c	ENSGT00940000162870.d
Northern American deer mouse	MODERN SPECIES	2	ENSPEMG00000007943	Slamf6 (ENSPEMG00000018569)	Vangl2 (ENSPEMG00000009191)	ENSPEMG00000028575	Nhlh1 (ENSPEMG00000003780)	Ncstn (ENSPEMG00000012185)	ENSPEMG00000010800	Pex19 (ENSPEMG00000011399)	Dcaf8 (ENSPEMG00000006936)	Pea15a (ENSPEMG00000030852)	Casq1 (ENSPEMG00000011466)	Atp1a4 (ENSPEMG00000000606)	Atp1a2 (ENSPEMG00000013238)	Igsf8 (ENSPEMG00000017176)	Kcnj9 (ENSPEMG00000014733) ##18	Kcnj10 (ENSPEMG00000028152) ##22	Pigm (ENSPEMG00000004635)	Slamf9 (ENSPEMG00000009321)	Igsf9 (ENSPEMG00000011335)	Tagln2 (ENSPEMG00000010399)	Cfap45 (ENSPEMG00000016692)	Vsig8 (ENSPEMG00000009137)	Slamf8 (ENSPEMG00000015798)	Dusp23 (ENSPEMG00000011195)	Crp (ENSPEMG00000024726)	Apcs (ENSPEMG00000017741)	Or10j5 (ENSPEMG00000001889)	ENSPEMG00000002551	ENSPEMG00000014050	Or10j3 (ENSPEMG00000029514)	Or10j3b (ENSPEMG00000024812)
Prairie vole	MODERN SPECIES	118	Slamf1 (ENSMOCG00000018192)	Cd84 (ENSMOCG00000001691)	Slamf6 (ENSMOCG00000008006)	Vangl2 (ENSMOCG00000021350)	Nhlh1 (ENSMOCG00000003124)	Ncstn (ENSMOCG00000003397)	Copa (ENSMOCG00000001697)	Pex19 (ENSMOCG00000000332)	Dcaf8 (ENSMOCG00000014874)	Pea15a (ENSMOCG00000013796)	Casq1 (ENSMOCG00000003428)	Atp1a4 (ENSMOCG00000016552)	Atp1a2 (ENSMOCG00000001569)	Igsf8 (ENSMOCG00000007929)	Kcnj9 (ENSMOCG00000017119) ##18	Kcnj10 (ENSMOCG00000015793) ##22	Pigm (ENSMOCG00000001955)	Slamf9 (ENSMOCG00000014177)	Igsf9 (ENSMOCG00000000988)	Tagln2 (ENSMOCG00000014146)	Cfap45 (ENSMOCG00000008042)	Vsig8 (ENSMOCG00000016054)	Slamf8 (ENSMOCG00000008354)	Dusp23 (ENSMOCG00000021329)	Crp (ENSMOCG00000021079)	Apcs (ENSMOCG00000015189)	Or10j5 (ENSMOCG00000002391)	ENSMOCG00000002640	Fcer1a (ENSMOCG00000017859)	ENSMOCG00000015105	Ackr1 (ENSMOCG00000014680)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870.c
Chinese hamster chok1gshd	MODERN SPECIES	2	Slamf1 (ENSCGRG00001024974)	Cd84 (ENSCGRG00001024659)	Slamf6 (ENSCGRG00001020856)	Vangl2 (ENSCGRG00001012948)	Nhlh1 (ENSCGRG00001002828)	Ncstn (ENSCGRG00001011290)	Copa (ENSCGRG00001024070)	PEX19 (ENSCGRG00001024356)	Dcaf8 (ENSCGRG00001005377)	PEA15 (ENSCGRG00001024826)	Casq1 (ENSCGRG00001022123)	Atp1a4 (ENSCGRG00001019614)	Atp1a2 (ENSCGRG00001009182)	Igsf8 (ENSCGRG00001018298)	Kcnj9 (ENSCGRG00001000969) ##18	Kcnj10 (ENSCGRG00001003433) ##22	Pigm (ENSCGRG00001004342)	Slamf9 (ENSCGRG00001018988)	Igsf9 (ENSCGRG00001020689)	ENSCGRG00001018057	Cfap45 (ENSCGRG00001013630)	Vsig8 (ENSCGRG00001023265)	Slamf8 (ENSCGRG00001019455)	ENSCGRG00001025048	Dusp23 (ENSCGRG00001025037)	Crp (ENSCGRG00001024968)	Apcs (ENSCGRG00001024627)	Or10j5 (ENSCGRG00001002194)	ENSCGRG00001012364	ENSCGRG00001012248	ENSCGRG00001012729
Golden Hamster	MODERN SPECIES	697	Cd48 (ENSMAUG00000003096)	Slamf1 (ENSMAUG00000001268)	Cd84 (ENSMAUG00000001029)	Slamf6 (ENSMAUG00000000334)	Nhlh1 (ENSMAUG00000001351)	Ncstn (ENSMAUG00000019880)	Copa (ENSMAUG00000009587)	Pex19 (ENSMAUG00000008866)	Dcaf8 (ENSMAUG00000007971)	Pea15a (ENSMAUG00000002640)	Casq1 (ENSMAUG00000001557)	Atp1a4 (ENSMAUG00000013532)	Atp1a2 (ENSMAUG00000009483)	Igsf8 (ENSMAUG00000005168)	Kcnj9 (ENSMAUG00000004618) ##18	Kcnj10 (ENSMAUG00000003384) ##22	Pigm (ENSMAUG00000002040)	Slamf9 (ENSMAUG00000002531)	Igsf9 (ENSMAUG00000016697)	Tagln2 (ENSMAUG00000015755)	Cfap45 (ENSMAUG00000014684)	Vsig8 (ENSMAUG00000013550)	Slamf8 (ENSMAUG00000013303)	Fcrl6 (ENSMAUG00000012715)	Dusp23 (ENSMAUG00000012353)	Crp (ENSMAUG00000012308)	Apcs (ENSMAUG00000011083)	Or10j5 (ENSMAUG00000001340)	ENSMAUG00000018501	Fcer1a (ENSMAUG00000016317)	ENSMAUG00000015197
Murinae	ANCESTRAL SPECIES	11	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163654.d	ENSGT00940000163654.c	ENSGT00940000162870.c
Mus	ANCESTRAL SPECIES	5	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163654.d	ENSGT00940000163654.c	ENSGT00940000162870.c
Mus_A	ANCESTRAL SPECIES	5	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163654.d	ENSGT00940000163654.c	ENSGT00940000162870.c
Mus_B	ANCESTRAL SPECIES	7	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163654.d	ENSGT00940000163654.c	ENSGT00940000162870.c
Mus_C	ANCESTRAL SPECIES	1	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.D.gb	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163654.d	ENSGT00940000163654.c	ENSGT00940000162870.c
Steppe mouse	MODERN SPECIES	2796	Cd84 (ENSMSIG00000007368)	ENSMSIG00000007449	Slamf6 (ENSMSIG00000007456)	Vangl2 (ENSMSIG00000007506)	Nhlh1 (ENSMSIG00000007585)	Ncstn (ENSMSIG00000007600)	Copa (ENSMSIG00000007673)	Pex19 (ENSMSIG00000007845)	Dcaf8 (ENSMSIG00000007890)	Pea15a (ENSMSIG00000007925)	Casq1 (ENSMSIG00000007938)	Atp1a4 (ENSMSIG00000007957)	Atp1a2 (ENSMSIG00000008038)	Igsf8 (ENSMSIG00000008092)	Kcnj9 (ENSMSIG00000008117) ##18	Kcnj10 (ENSMSIG00000008133) ##22	Pigm (ENSMSIG00000008141)	Slamf9 (ENSMSIG00000008147)	Igsf9 (ENSMSIG00000008196)	Tagln2 (ENSMSIG00000008348)	Cfap45 (ENSMSIG00000008381)	Vsig8 (ENSMSIG00000008400)	Slamf8 (ENSMSIG00000008459)	Fcrl6 (ENSMSIG00000008473)
spretus	MODERN SPECIES		Slamf7 (MGP_SPRETEiJ_G0015682)	Cd48 (MGP_SPRETEiJ_G0015683)	Cd84 (MGP_SPRETEiJ_G0015684)	Slamf6 (MGP_SPRETEiJ_G0015685)	Vangl2 (MGP_SPRETEiJ_G0015686)	Nhlh1 (MGP_SPRETEiJ_G0015687)	Ncstn (MGP_SPRETEiJ_G0015688)	Copa (MGP_SPRETEiJ_G0015689)	Pex19 (MGP_SPRETEiJ_G0015690)	Dcaf8 (MGP_SPRETEiJ_G0015691)	Pea15a (MGP_SPRETEiJ_G0015692)	Casq1 (MGP_SPRETEiJ_G0015693)	Atp1a4 (MGP_SPRETEiJ_G0015694)	Atp1a2 (MGP_SPRETEiJ_G0015696)	Kcnj9 (MGP_SPRETEiJ_G0015697) ##18	Kcnj10 (MGP_SPRETEiJ_G0015698) ##22	Pigm (MGP_SPRETEiJ_G0015699)	Slamf9 (MGP_SPRETEiJ_G0015700)	Igsf9 (MGP_SPRETEiJ_G0015701)	Tagln2 (MGP_SPRETEiJ_G0015702)	Cfap45 (MGP_SPRETEiJ_G0015703)	Vsig8 (MGP_SPRETEiJ_G0015704)	Slamf8 (MGP_SPRETEiJ_G0015705)	Fcrl6 (MGP_SPRETEiJ_G0015706)	Dusp23 (MGP_SPRETEiJ_G0015707)	Crp (MGP_SPRETEiJ_G0015708)	Apcs (MGP_SPRETEiJ_G0015709)	Or10j5 (MGP_SPRETEiJ_G0015710)	Or10j27 (MGP_SPRETEiJ_G0015711)	Or10j7 (MGP_SPRETEiJ_G0015712)	MGP_SPRETEiJ_G0015713
Mouse	MODERN SPECIES		Slamf1 (ENSMUSG00000015316)	Cd84 (ENSMUSG00000038147)	Slamf6 (ENSMUSG00000015314)	Vangl2 (ENSMUSG00000026556)	Nhlh1 (ENSMUSG00000051251)	Ncstn (ENSMUSG00000003458)	Copa (ENSMUSG00000026553)	Pex19 (ENSMUSG00000003464)	Dcaf8 (ENSMUSG00000026554)	Pea15a (ENSMUSG00000013698)	Casq1 (ENSMUSG00000007122)	Atp1a4 (ENSMUSG00000007107)	Igsf8 (ENSMUSG00000038034)	Atp1a2 (ENSMUSG00000007097)	Kcnj9 (ENSMUSG00000038026) ##18	Kcnj10 (ENSMUSG00000044708) ##22	Pigm (ENSMUSG00000050229)	Slamf9 (ENSMUSG00000026548)	Igsf9 (ENSMUSG00000037995)	Tagln2 (ENSMUSG00000026547)	Cfap45 (ENSMUSG00000026546)	Vsig8 (ENSMUSG00000049598)	Slamf8 (ENSMUSG00000053318)	Fcrl6 (ENSMUSG00000070504)	Dusp23 (ENSMUSG00000026544)	Crp (ENSMUSG00000037942)	Apcs (ENSMUSG00000026542)	Or10j5 (ENSMUSG00000037924)	Or10j27 (ENSMUSG00000062527)	Or10j7 (ENSMUSG00000058981)	Or10j3 (ENSMUSG00000046643)
Ryukyu mouse	MODERN SPECIES		Slamf1 (MGP_CAROLIEiJ_G0014879)	Cd84 (MGP_CAROLIEiJ_G0014880)	Slamf6 (MGP_CAROLIEiJ_G0014881)	Vangl2 (MGP_CAROLIEiJ_G0014882)	Nhlh1 (MGP_CAROLIEiJ_G0014883)	Ncstn (MGP_CAROLIEiJ_G0014884)	Copa (MGP_CAROLIEiJ_G0014885)	Pex19 (MGP_CAROLIEiJ_G0014886)	Dcaf8 (MGP_CAROLIEiJ_G0014887)	Pea15a (MGP_CAROLIEiJ_G0014888)	Casq1 (MGP_CAROLIEiJ_G0014889)	Atp1a4 (MGP_CAROLIEiJ_G0014890)	Igsf8 (MGP_CAROLIEiJ_G0014891)	Atp1a2 (MGP_CAROLIEiJ_G0014892)	Kcnj9 (MGP_CAROLIEiJ_G0014893) ##18	Kcnj10 (MGP_CAROLIEiJ_G0014894) ##22	Pigm (MGP_CAROLIEiJ_G0014895)	MGP_CAROLIEiJ_G0014896	Igsf9 (MGP_CAROLIEiJ_G0014897)	Tagln2 (MGP_CAROLIEiJ_G0014898)	Cfap45 (MGP_CAROLIEiJ_G0014899)	Vsig8 (MGP_CAROLIEiJ_G0014900)	Slamf8 (MGP_CAROLIEiJ_G0014901)	Fcrl6 (MGP_CAROLIEiJ_G0014902)	Dusp23 (MGP_CAROLIEiJ_G0014903)	Crp (MGP_CAROLIEiJ_G0014904)	Apcs (MGP_CAROLIEiJ_G0014905)	Or10j5 (MGP_CAROLIEiJ_G0014906)	Or10j27 (MGP_CAROLIEiJ_G0014907)	Or10j7 (MGP_CAROLIEiJ_G0014908)	Or10j3 (MGP_CAROLIEiJ_G0014909)
Shrew mouse	MODERN SPECIES	18	Slamf1 (MGP_PahariEiJ_G0028116)	MGP_PahariEiJ_G0028117	Slamf6 (MGP_PahariEiJ_G0028118)	Vangl2 (MGP_PahariEiJ_G0028119)	Nhlh1 (MGP_PahariEiJ_G0028120)	Ncstn (MGP_PahariEiJ_G0028121)	Copa (MGP_PahariEiJ_G0028122)	Pex19 (MGP_PahariEiJ_G0028123)	Dcaf8 (MGP_PahariEiJ_G0028124)	Pea15a (MGP_PahariEiJ_G0028125)	Casq1 (MGP_PahariEiJ_G0028126)	Atp1a4 (MGP_PahariEiJ_G0028127)	Igsf8 (MGP_PahariEiJ_G0028128)	Atp1a2 (MGP_PahariEiJ_G0028129)	Kcnj9 (MGP_PahariEiJ_G0028130) ##18	Kcnj10 (MGP_PahariEiJ_G0028131) ##22	Pigm (MGP_PahariEiJ_G0028132)	Slamf9 (MGP_PahariEiJ_G0028133)	Igsf9 (MGP_PahariEiJ_G0028134)	Tagln2 (MGP_PahariEiJ_G0028135)	Cfap45 (MGP_PahariEiJ_G0028136)	Vsig8 (MGP_PahariEiJ_G0028137)	Slamf8 (MGP_PahariEiJ_G0028138)	MGP_PahariEiJ_G0028139	Dusp23 (MGP_PahariEiJ_G0028140)	Crp (MGP_PahariEiJ_G0028141)	Apcs (MGP_PahariEiJ_G0028142)	Or10j5 (MGP_PahariEiJ_G0028143)	Or10j27 (MGP_PahariEiJ_G0028145)	Or10j7 (MGP_PahariEiJ_G0028146)	Or10j3b (MGP_PahariEiJ_G0028147)
Rat	MODERN SPECIES	4	Slamf1 (ENSRNOG00000059073)	Cd84 (ENSRNOG00000022884)	Slamf6 (ENSRNOG00000038286)	Vangl2 (ENSRNOG00000004889)	Nhlh1 (ENSRNOG00000005166)	Ncstn (ENSRNOG00000005355)	Copa (ENSRNOG00000006247)	LOC102548286 (ENSRNOG00000057116)	Dcaf8 (ENSRNOG00000006785)	Pea15 (ENSRNOG00000046996)	Casq1 (ENSRNOG00000006930)	Atp1a4 (ENSRNOG00000032378)	Atp1a2 (ENSRNOG00000007290)	Igsf8 (ENSRNOG00000007604)	Kcnj9 (ENSRNOG00000007645) ##18	Kcnj10 (ENSRNOG00000068444) ##22	Pigm (ENSRNOG00000007735)	Slamf9 (ENSRNOG00000008045)	Igsf9 (ENSRNOG00000008054)	Tagln2 (ENSRNOG00000008301)	Cfap45 (ENSRNOG00000008492)	Vsig8 (ENSRNOG00000008668)	Slamf8 (ENSRNOG00000008736)	Fcrl6 (ENSRNOG00000000055)	Dusp23 (ENSRNOG00000022143)	Crp (ENSRNOG00000000053)	LOC108348980 (ENSRNOG00000028939)	Apcs (ENSRNOG00000009086)	Or10j5 (ENSRNOG00000009141)	Or10j7 (ENSRNOG00000064078)	Or10j27 (ENSRNOG00000064146)
Rodentia_A	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000162870.e.a	ENSGT00940000163654
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000165113	ENSGT00940000163968	ENSGT00940000163654	ENSGT00940000162870.e.b
Guinea pig	MODERN SPECIES	56	SLAMF1 (ENSCPOG00000002925)	CD84 (ENSCPOG00000008701)	ENSCPOG00000006924	VANGL2 (ENSCPOG00000010224)	NHLH1 (ENSCPOG00000021596)	NCSTN (ENSCPOG00000014923)	COPA (ENSCPOG00000014917)	PEX19 (ENSCPOG00000014916)	DCAF8 (ENSCPOG00000014915)	PEA15 (ENSCPOG00000032455)	CASQ1 (ENSCPOG00000014914)	ATP1A4 (ENSCPOG00000032779)	ATP1A2 (ENSCPOG00000014903)	IGSF8 (ENSCPOG00000024002)	KCNJ9 (ENSCPOG00000023593) ##18	KCNJ10 (ENSCPOG00000039801) ##22	PIGM (ENSCPOG00000003787)	SLAMF9 (ENSCPOG00000007992)	IGSF9 (ENSCPOG00000004460)	TAGLN2 (ENSCPOG00000027416)	CFAP45 (ENSCPOG00000004457)	VSIG8 (ENSCPOG00000003207)	SLAMF8 (ENSCPOG00000036904)	ENSCPOG00000020521	DUSP23 (ENSCPOG00000034085)	CRP (ENSCPOG00000013154)	APCS (ENSCPOG00000009766)	OR10J4 (ENSCPOG00000025720)	ENSCPOG00000023288	ENSCPOG00000032628	OR10J3 (ENSCPOG00000037408)
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000162870.e.a	ENSGT01050000244808.A.b.a.b	ENSGT00940000159272.A	ENSGT01100000263515.a.b.a.b.b.h.a.a	ENSGT00390000006372	ENSGT00940000159779
Long-tailed chinchilla	MODERN SPECIES	175	SLAMF1 (ENSCLAG00000015725)	CD84 (ENSCLAG00000011978)	ENSCLAG00000013256	VANGL2 (ENSCLAG00000015673)	NHLH1 (ENSCLAG00000016448)	NCSTN (ENSCLAG00000016809)	COPA (ENSCLAG00000017268)	PEX19 (ENSCLAG00000017075)	DCAF8 (ENSCLAG00000014765)	PEA15 (ENSCLAG00000016388)	CASQ1 (ENSCLAG00000016275)	ATP1A4 (ENSCLAG00000012810)	ATP1A2 (ENSCLAG00000012804)	IGSF8 (ENSCLAG00000011758)	KCNJ9 (ENSCLAG00000012616) ##18	KCNJ10 (ENSCLAG00000017311) ##22	PIGM (ENSCLAG00000017954)	SLAMF9 (ENSCLAG00000014897)	IGSF9 (ENSCLAG00000013469)	TAGLN2 (ENSCLAG00000015785)	CFAP45 (ENSCLAG00000013119)	VSIG8 (ENSCLAG00000015894)	SLAMF8 (ENSCLAG00000014996)	DUSP23 (ENSCLAG00000013049)	APCS (ENSCLAG00000013265)	OR10J3 (ENSCLAG00000017924)	FCER1A (ENSCLAG00000013176)	ENSCLAG00000017841	ENSCLAG00000013233	ACKR1 (ENSCLAG00000012793)	CADM3 (ENSCLAG00000011984)
Degu	MODERN SPECIES	157	ENSODEG00000019372 ##27	VANGL2 (ENSODEG00000007301)	NHLH1 (ENSODEG00000007624)	NCSTN (ENSODEG00000007729)	COPA (ENSODEG00000007358)	ENSODEG00000019505	PEX19 (ENSODEG00000008129)	DCAF8 (ENSODEG00000008873)	ENSODEG00000008689	PEA15 (ENSODEG00000008919)	CASQ1 (ENSODEG00000007881)	ATP1A4 (ENSODEG00000009334)	ATP1A2 (ENSODEG00000009923)	IGSF8 (ENSODEG00000011607)	KCNJ9 (ENSODEG00000009424) ##18	KCNJ10 (ENSODEG00000008231) ##22	PIGM (ENSODEG00000019551)	SLAMF9 (ENSODEG00000008986)	IGSF9 (ENSODEG00000008294)	CFAP45 (ENSODEG00000009032)	VSIG8 (ENSODEG00000008970)	SLAMF8 (ENSODEG00000007757)	DUSP23 (ENSODEG00000008041)	ENSODEG00000008105	APCS (ENSODEG00000007873)	ENSODEG00000008155	ENSODEG00000019581	ENSODEG00000011465	ENSODEG00000010881	ENSODEG00000008544	ACKR1 (ENSODEG00000009370)
Naked mole-rat female	MODERN SPECIES	20	CD84 (ENSHGLG00000018167)	ENSHGLG00000040731	ENSHGLG00000044874	VANGL2 (ENSHGLG00000015020)	NHLH1 (ENSHGLG00000020397)	NCSTN (ENSHGLG00000007191)	COPA (ENSHGLG00000011307)	PEX19 (ENSHGLG00000006365)	DCAF8 (ENSHGLG00000009593)	PEA15 (ENSHGLG00000049375)	CASQ1 (ENSHGLG00000036911)	ATP1A4 (ENSHGLG00000018340)	ATP1A2 (ENSHGLG00000015210)	IGSF8 (ENSHGLG00000017599)	KCNJ9 (ENSHGLG00000015357) ##18	KCNJ10 (ENSHGLG00000035959) ##22	PIGM (ENSHGLG00000020908)	SLAMF9 (ENSHGLG00000014754)	IGSF9 (ENSHGLG00000014869)	ENSHGLG00000006396	CFAP45 (ENSHGLG00000007235)	VSIG8 (ENSHGLG00000008875)	SLAMF8 (ENSHGLG00000041257)	DUSP23 (ENSHGLG00000037025)	ENSHGLG00000047194	CRP (ENSHGLG00000015003)	APCS (ENSHGLG00000047260)	OR10J4 (ENSHGLG00000020816)	ENSHGLG00000040096	ENSHGLG00000043592	FCER1A (ENSHGLG00000007498)
Sciuridae	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Marmotini	ANCESTRAL SPECIES	65	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Marmotini_b	ANCESTRAL SPECIES	83	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Arctic ground squirrel	MODERN SPECIES	374	CD48 (ENSUPAG00010011461)	SLAMF1 (ENSUPAG00010011451)	CD84 (ENSUPAG00010011366)	VANGL2 (ENSUPAG00010011323)	NHLH1 (ENSUPAG00010011320)	NCSTN (ENSUPAG00010011309)	COPA (ENSUPAG00010011242)	PEX19 (ENSUPAG00010011225)	DCAF8 (ENSUPAG00010011203)	ENSUPAG00010011200	PEA15 (ENSUPAG00010011194)	CASQ1 (ENSUPAG00010011189)	ATP1A4 (ENSUPAG00010011137)	IGSF8 (ENSUPAG00010011130)	KCNJ9 (ENSUPAG00010011126) ##18	KCNJ10 (ENSUPAG00010011125) ##22	PIGM (ENSUPAG00010011124)	SLAMF9 (ENSUPAG00010011119)	IGSF9 (ENSUPAG00010011102)	TAGLN2 (ENSUPAG00010011095)	CFAP45 (ENSUPAG00010011087)	VSIG8 (ENSUPAG00010011083)	SLAMF8 (ENSUPAG00010011080)	ENSUPAG00010011076	DUSP23 (ENSUPAG00010011070)	CRP (ENSUPAG00010011065)	APCS (ENSUPAG00010011064)	OR10J5 (ENSUPAG00010011055)	OR10J1 (ENSUPAG00010011051)	OR10J4 (ENSUPAG00010011048)	ENSUPAG00010011042
Squirrel	MODERN SPECIES	340	CD48 (ENSSTOG00000007252)	SLAMF1 (ENSSTOG00000007237)	CD84 (ENSSTOG00000007218)	VANGL2 (ENSSTOG00000002465)	NHLH1 (ENSSTOG00000027988)	NCSTN (ENSSTOG00000008815)	COPA (ENSSTOG00000008757)	PEX19 (ENSSTOG00000008743)	DCAF8 (ENSSTOG00000007593)	PEA15 (ENSSTOG00000007575)	CASQ1 (ENSSTOG00000027089)	ATP1A4 (ENSSTOG00000007516)	ATP1A2 (ENSSTOG00000007480)	IGSF8 (ENSSTOG00000025797)	KCNJ9 (ENSSTOG00000022007) ##18	KCNJ10 (ENSSTOG00000014095) ##22	PIGM (ENSSTOG00000021767)	SLAMF9 (ENSSTOG00000007452)	IGSF9 (ENSSTOG00000027707)	TAGLN2 (ENSSTOG00000028012)	CFAP45 (ENSSTOG00000007432)	VSIG8 (ENSSTOG00000007410)	SLAMF8 (ENSSTOG00000007395)	CRP (ENSSTOG00000024783)	APCS (ENSSTOG00000022183)	OR10J5 (ENSSTOG00000004580)	OR10J1 (ENSSTOG00000004574)	OR10J4 (ENSSTOG00000021702)	OR10J3 (ENSSTOG00000004564)	ENSSTOG00000014023	ENSSTOG00000004550
Alpin marmot	MODERN SPECIES	29	SLAMF1 (ENSMMMG00000022205)	CD84 (ENSMMMG00000022217)	ENSMMMG00000022219	VANGL2 (ENSMMMG00000022221)	NHLH1 (ENSMMMG00000022244)	NCSTN (ENSMMMG00000022245)	COPA (ENSMMMG00000022255)	PEX19 (ENSMMMG00000022272)	DCAF8 (ENSMMMG00000022285)	PEA15 (ENSMMMG00000022310)	CASQ1 (ENSMMMG00000022314)	ENSMMMG00000022329	ATP1A2 (ENSMMMG00000022340)	IGSF8 (ENSMMMG00000022358)	KCNJ9 (ENSMMMG00000022367) ##18	KCNJ10 (ENSMMMG00000022374) ##22	PIGM (ENSMMMG00000022376)	SLAMF9 (ENSMMMG00000022379)	IGSF9 (ENSMMMG00000022380)	TAGLN2 (ENSMMMG00000022397)	CFAP45 (ENSMMMG00000022400)	VSIG8 (ENSMMMG00000022406)	SLAMF8 (ENSMMMG00000022412)	ENSMMMG00000022417	DUSP23 (ENSMMMG00000022422)	CRP (ENSMMMG00000022433)	APCS (ENSMMMG00000022435)	OR10J5 (ENSMMMG00000022442)	OR10J1 (ENSMMMG00000022465)	OR10J4 (ENSMMMG00000022466)	ENSMMMG00000022473
Eurasian red squirrel	MODERN SPECIES		CD84 (ENSSVLG00005008696)	ENSSVLG00005008589	ENSSVLG00005008554	VANGL2 (ENSSVLG00005008513)	NHLH1 (ENSSVLG00005008496)	NCSTN (ENSSVLG00005008466)	COPA (ENSSVLG00005008406)	PEX19 (ENSSVLG00005008343)	DCAF8 (ENSSVLG00005008308)	ENSSVLG00005008261	CASQ1 (ENSSVLG00005008157)	ATP1A4 (ENSSVLG00005008010)	ATP1A2 (ENSSVLG00005007734)	IGSF8 (ENSSVLG00005007653)	KCNJ9 (ENSSVLG00005007621) ##18	ENSSVLG00005007587 ##22	SLAMF9 (ENSSVLG00005007532)	IGSF9 (ENSSVLG00005007334)	TAGLN2 (ENSSVLG00005007297)	CFAP45 (ENSSVLG00005007226)	ENSSVLG00005007193	VSIG8 (ENSSVLG00005007137)	ENSSVLG00005007083	DUSP23 (ENSSVLG00005007049)	CRP (ENSSVLG00005007022)	APCS (ENSSVLG00005006996)	OR10J5 (ENSSVLG00005006978)	OR10J1 (ENSSVLG00005006957)	OR10J4 (ENSSVLG00005006948)	ENSSVLG00005006925	ENSSVLG00005006907
Primates	ANCESTRAL SPECIES	7	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113
Strepsirrhini	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000165113	ENSGT00940000163968
Bushbaby	MODERN SPECIES	206	ENSOGAG00000015922	SLAMF1 (ENSOGAG00000015919)	CD84 (ENSOGAG00000002169)	SLAMF6 (ENSOGAG00000002168)	VANGL2 (ENSOGAG00000034760)	NHLH1 (ENSOGAG00000010592)	NCSTN (ENSOGAG00000001515)	COPA (ENSOGAG00000010585)	PEX19 (ENSOGAG00000024548)	DCAF8 (ENSOGAG00000011349)	PEA15 (ENSOGAG00000011348)	CASQ1 (ENSOGAG00000027222)	ATP1A2 (ENSOGAG00000011343)	IGSF8 (ENSOGAG00000024229)	KCNJ9 (ENSOGAG00000026356) ##18	KCNJ10 (ENSOGAG00000000856) ##22	PIGM (ENSOGAG00000030907)	SLAMF9 (ENSOGAG00000013177)	IGSF9 (ENSOGAG00000034181)	TAGLN2 (ENSOGAG00000028515)	CFAP45 (ENSOGAG00000010704)	VSIG8 (ENSOGAG00000010701)	SLAMF8 (ENSOGAG00000010698)	DUSP23 (ENSOGAG00000010691)	CRP (ENSOGAG00000010689)	ENSOGAG00000015384	APCS (ENSOGAG00000001034)	ENSOGAG00000029779	OR10J5 (ENSOGAG00000034929)	OR10J1 (ENSOGAG00000030157)	OR10J4 (ENSOGAG00000032393)
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Mouse lemur	MODERN SPECIES	11	CD48 (ENSMICG00000027704)	SLAMF1 (ENSMICG00000029784)	CD84 (ENSMICG00000012049)	SLAMF6 (ENSMICG00000038306)	VANGL2 (ENSMICG00000014019)	NHLH1 (ENSMICG00000012700)	NCSTN (ENSMICG00000014005)	COPA (ENSMICG00000013972)	PEX19 (ENSMICG00000042952)	DCAF8 (ENSMICG00000008012)	PEA15 (ENSMICG00000007999)	CASQ1 (ENSMICG00000007986)	ATP1A2 (ENSMICG00000007914)	IGSF8 (ENSMICG00000047269)	KCNJ9 (ENSMICG00000028846) ##18	ENSMICG00000043093 ##22	SLAMF9 (ENSMICG00000011363)	IGSF9 (ENSMICG00000011340)	ENSMICG00000032549	CFAP45 (ENSMICG00000015529)	SLAMF8 (ENSMICG00000047756)	DUSP23 (ENSMICG00000031321)	ENSMICG00000026470	OR10J5 (ENSMICG00000036914)	APCS (ENSMICG00000046846)	ENSMICG00000037456	FCER1A (ENSMICG00000011252)	ENSMICG00000032934	ACKR1 (ENSMICG00000028836)	CADM3 (ENSMICG00000011231)	AIM2 (ENSMICG00000014429)
Lemuriformes_a	ANCESTRAL SPECIES	57	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Coquerels sifaka	MODERN SPECIES	877	PRDM13 (ENSPCOG00000017811)	MCHR2 (ENSPCOG00000016672)	SIM1 (ENSPCOG00000026795)	ENSPCOG00000022080	NHLH1 (ENSPCOG00000008958)	NCSTN (ENSPCOG00000003818)	COPA (ENSPCOG00000015889)	PEX19 (ENSPCOG00000023210)	DCAF8 (ENSPCOG00000020516)	PEA15 (ENSPCOG00000023116)	CASQ1 (ENSPCOG00000013800)	ATP1A4 (ENSPCOG00000015025)	ATP1A2 (ENSPCOG00000028575)	IGSF8 (ENSPCOG00000015734)	KCNJ9 (ENSPCOG00000017373) ##18	ENSPCOG00000020119 ##22	SLAMF9 (ENSPCOG00000026453)	IGSF9 (ENSPCOG00000015618)	TAGLN2 (ENSPCOG00000020750)	CFAP45 (ENSPCOG00000022408)	VSIG8 (ENSPCOG00000006884)	SLAMF8 (ENSPCOG00000006445)	DUSP23 (ENSPCOG00000016262)	CRP (ENSPCOG00000013443)	ENSPCOG00000000116	APCS (ENSPCOG00000014740)	ENSPCOG00000011342	FCER1A (ENSPCOG00000019274)	ACKR1 (ENSPCOG00000009330)	CADM3 (ENSPCOG00000014604)	AIM2 (ENSPCOG00000000060)
Greater bamboo lemur	MODERN SPECIES	638	CD84 (ENSPSMG00000021531)	SLAMF6 (ENSPSMG00000021556)	VANGL2 (ENSPSMG00000021572)	NHLH1 (ENSPSMG00000021577)	NCSTN (ENSPSMG00000021616)	COPA (ENSPSMG00000021825)	ENSPSMG00000021983	PEX19 (ENSPSMG00000022006)	DCAF8 (ENSPSMG00000022059)	PEA15 (ENSPSMG00000022075)	CASQ1 (ENSPSMG00000022077)	ATP1A4 (ENSPSMG00000022149)	ATP1A2 (ENSPSMG00000022288)	IGSF8 (ENSPSMG00000022321)	KCNJ9 (ENSPSMG00000022323) ##18	ENSPSMG00000022325 ##22	SLAMF9 (ENSPSMG00000022335)	IGSF9 (ENSPSMG00000022381)	ENSPSMG00000022394	TAGLN2 (ENSPSMG00000022403)	CFAP45 (ENSPSMG00000022439)	VSIG8 (ENSPSMG00000022459)	SLAMF8 (ENSPSMG00000022463)	DUSP23 (ENSPSMG00000022468)
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Tarsier	MODERN SPECIES	4532	SLAMF1 (ENSTSYG00000010510)	CD84 (ENSTSYG00000011736)	SLAMF6 (ENSTSYG00000001419)	VANGL2 (ENSTSYG00000033305)	NHLH1 (ENSTSYG00000000582)	NCSTN (ENSTSYG00000012373)	COPA (ENSTSYG00000012370)	PEX19 (ENSTSYG00000011512)	DCAF8 (ENSTSYG00000007684)	PEA15 (ENSTSYG00000033263)	CASQ1 (ENSTSYG00000028369)	ATP1A4 (ENSTSYG00000003885)	ATP1A2 (ENSTSYG00000029846)	IGSF8 (ENSTSYG00000034054)	KCNJ9 (ENSTSYG00000030756) ##18	ENSTSYG00000003781 ##22	IGSF9 (ENSTSYG00000029345)	TAGLN2 (ENSTSYG00000001645)	CFAP45 (ENSTSYG00000002364)	VSIG8 (ENSTSYG00000031273)	SLAMF8 (ENSTSYG00000004746)	ENSTSYG00000000556	DUSP23 (ENSTSYG00000029394)	CRP (ENSTSYG00000012775)
Simiiformes	ANCESTRAL SPECIES	8	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000163968	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Cebidae	ANCESTRAL SPECIES	12	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT01100000263515.a.b.a.b.b.h.a.b.a	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372	ENSGT00940000159779
Bolivian squirrel monkey	MODERN SPECIES	136	SLAMF1 (ENSSBOG00000036205)	ENSSBOG00000023711	CD84 (ENSSBOG00000020634)	SLAMF6 (ENSSBOG00000019937)	VANGL2 (ENSSBOG00000025302)	NHLH1 (ENSSBOG00000019765)	NCSTN (ENSSBOG00000034466)	COPA (ENSSBOG00000033697)	PEX19 (ENSSBOG00000024569)	DCAF8 (ENSSBOG00000027086)	PEA15 (ENSSBOG00000024119)	CASQ1 (ENSSBOG00000033165)	ATP1A2 (ENSSBOG00000026209)	IGSF8 (ENSSBOG00000021162)	KCNJ9 (ENSSBOG00000036068) ##18	ENSSBOG00000029266 ##22	SLAMF9 (ENSSBOG00000020320)	IGSF9 (ENSSBOG00000024421)	TAGLN2 (ENSSBOG00000032060)	CFAP45 (ENSSBOG00000008535)	VSIG8 (ENSSBOG00000028536)	SLAMF8 (ENSSBOG00000026112)	FCRL6 (ENSSBOG00000035509)	DUSP23 (ENSSBOG00000028584)	CRP (ENSSBOG00000009126)	APCS (ENSSBOG00000032545)	ENSSBOG00000024023	ENSSBOG00000014650	FCER1A (ENSSBOG00000028978)	ACKR1 (ENSSBOG00000026604)	CADM3 (ENSSBOG00000022549)
Capuchin	MODERN SPECIES	313	CD84 (ENSCCAG00000035641)	SLAMF6 (ENSCCAG00000029555)	ENSCCAG00000000052	VANGL2 (ENSCCAG00000034605)	NHLH1 (ENSCCAG00000018247)	NCSTN (ENSCCAG00000026884)	COPA (ENSCCAG00000035922)	PEX19 (ENSCCAG00000029027)	DCAF8 (ENSCCAG00000029192)	PEA15 (ENSCCAG00000035896)	CASQ1 (ENSCCAG00000035822)	ATP1A4 (ENSCCAG00000037154)	ATP1A2 (ENSCCAG00000035348)	IGSF8 (ENSCCAG00000034717)	KCNJ9 (ENSCCAG00000028171) ##18	ENSCCAG00000036022 ##22	SLAMF9 (ENSCCAG00000030969)	IGSF9 (ENSCCAG00000037504)	ENSCCAG00000035859	CFAP45 (ENSCCAG00000037549)	VSIG8 (ENSCCAG00000025741)	SLAMF8 (ENSCCAG00000034074)	FCRL6 (ENSCCAG00000023320)	DUSP23 (ENSCCAG00000021134)	CRP (ENSCCAG00000022081)	APCS (ENSCCAG00000019709)	OR10J5 (ENSCCAG00000028466)	OR10J3 (ENSCCAG00000034990)	FCER1A (ENSCCAG00000034456)	ACKR1 (ENSCCAG00000021032)	CADM3 (ENSCCAG00000033767)
Marmoset	MODERN SPECIES	9	ENSCJAG00000070646	CD84 (ENSCJAG00000005734)	SLAMF6 (ENSCJAG00000080867)	ENSCJAG00000069817	VANGL2 (ENSCJAG00000005758)	NCSTN (ENSCJAG00000005777)	COPA (ENSCJAG00000005837)	PEX19 (ENSCJAG00000005879)	DCAF8 (ENSCJAG00000005913)	PEA15 (ENSCJAG00000082639)	CASQ1 (ENSCJAG00000073940)	ENSCJAG00000079945	IGSF8 (ENSCJAG00000041164)	KCNJ9 (ENSCJAG00000006092) ##18	ENSCJAG00000074194	ENSCJAG00000044098 ##22	ATP1A2 (ENSCJAG00000006022)	SLAMF9 (ENSCJAG00000006099)	IGSF9 (ENSCJAG00000006107)	TAGLN2 (ENSCJAG00000006156)	CFAP45 (ENSCJAG00000006175)	VSIG8 (ENSCJAG00000006224)	SLAMF8 (ENSCJAG00000006239)	DUSP23 (ENSCJAG00000080143)	CRP (ENSCJAG00000006271)	APCS (ENSCJAG00000006279)	ENSCJAG00000052551	OR10J1 (ENSCJAG00000022039)	OR10J3 (ENSCJAG00000061455)	FCER1A (ENSCJAG00000006292)	ACKR1 (ENSCJAG00000006303)
Mas night monkey	MODERN SPECIES	1180	CD84 (ENSANAG00000027748)	SLAMF6 (ENSANAG00000030397)	VANGL2 (ENSANAG00000025927)	NHLH1 (ENSANAG00000019487)	NCSTN (ENSANAG00000035070)	COPA (ENSANAG00000023326)	ENSANAG00000010196	PEX19 (ENSANAG00000023353)	ENSANAG00000026536	ENSANAG00000035568	PEA15 (ENSANAG00000034320)	CASQ1 (ENSANAG00000036861)	ATP1A2 (ENSANAG00000034710)	IGSF8 (ENSANAG00000028885)	KCNJ9 (ENSANAG00000025048) ##18	ENSANAG00000001403 ##22	SLAMF9 (ENSANAG00000032660)	IGSF9 (ENSANAG00000029906)	TAGLN2 (ENSANAG00000034482)	CFAP45 (ENSANAG00000022146)	SLAMF8 (ENSANAG00000028983)	FCRL6 (ENSANAG00000030620)	ENSANAG00000036469	CRP (ENSANAG00000030906)	APCS (ENSANAG00000025821)	ENSANAG00000030797	ENSANAG00000025018	OR10J3 (ENSANAG00000032701)	FCER1A (ENSANAG00000006240)	ACKR1 (ENSANAG00000022852)	CADM3 (ENSANAG00000024662)
Catarrhini	ANCESTRAL SPECIES	10	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Hominoidea	ANCESTRAL SPECIES	7	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Gibbon	MODERN SPECIES	2	SLAMF6 (ENSNLEG00000013641)	ENSNLEG00000013639	NHLH1 (ENSNLEG00000013637)	NCSTN (ENSNLEG00000013620)	COPA (ENSNLEG00000026886)	ENSNLEG00000029023	PEX19 (ENSNLEG00000026787)	DCAF8 (ENSNLEG00000013532)	PEA15 (ENSNLEG00000013504)	ENSNLEG00000030215	ENSNLEG00000013499	ATP1A4 (ENSNLEG00000013431)	ATP1A2 (ENSNLEG00000028357)	IGSF8 (ENSNLEG00000013416)	ENSNLEG00000029263 ##18	ENSNLEG00000030285 ##22	PIGM (ENSNLEG00000013425)	ENSNLEG00000013423	IGSF9 (ENSNLEG00000013353)	ENSNLEG00000013350	CFAP45 (ENSNLEG00000013296)	ENSNLEG00000013290	ENSNLEG00000035894	SLAMF8 (ENSNLEG00000013286)	FCRL6 (ENSNLEG00000013276)	DUSP23 (ENSNLEG00000013271)	CRP (ENSNLEG00000013261)	APCS (ENSNLEG00000013249)	OR10J5 (ENSNLEG00000019159)	OR10J1 (ENSNLEG00000019158)	ENSNLEG00000034423
Hominidae	ANCESTRAL SPECIES	6	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Orangutan	MODERN SPECIES		ENSPPYG00000000628	CD84 (ENSPPYG00000000629)	SLAMF6 (ENSPPYG00000000630)	VANGL2 (ENSPPYG00000000631)	NHLH1 (ENSPPYG00000000632)	NCSTN (ENSPPYG00000000633)	COPA (ENSPPYG00000000634)	PEX19 (ENSPPYG00000000636)	DCAF8 (ENSPPYG00000000637)	PEA15 (ENSPPYG00000000638)	CASQ1 (ENSPPYG00000000639)	ATP1A4 (ENSPPYG00000000640)	ATP1A2 (ENSPPYG00000000641)	IGSF8 (ENSPPYG00000000642)	KCNJ9 (ENSPPYG00000000643) ##18	ENSPPYG00000035270 ##22	ENSPPYG00000000646	IGSF9 (ENSPPYG00000000647)	ENSPPYG00000000648	CFAP45 (ENSPPYG00000000650)	VSIG8 (ENSPPYG00000000651)	SLAMF8 (ENSPPYG00000000652)	FCRL6 (ENSPPYG00000000653)	DUSP23 (ENSPPYG00000000654)	CRP (ENSPPYG00000000655)	APCS (ENSPPYG00000000657)	OR10J5 (ENSPPYG00000000658)	FCER1A (ENSPPYG00000000660)	ACKR1 (ENSPPYG00000000662)	CADM3 (ENSPPYG00000000663)	AIM2 (ENSPPYG00000000664)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000154319.u.a.c.b	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00910000147448	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163968	ENSGT00940000163654
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000154319.u.a.c.b	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00910000147448	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163654	ENSGT00940000162870
Human	MODERN SPECIES		SLAMF6 (ENSG00000162739)	VANGL2 (ENSG00000162738)	NHLH1 (ENSG00000171786)	NCSTN (ENSG00000162736)	COPA (ENSG00000122218)	PEX19 (ENSG00000162735)	ENSG00000258465	DCAF8 (ENSG00000132716)	PEA15 (ENSG00000162734)	CASQ1 (ENSG00000143318)	ATP1A4 (ENSG00000132681)	ATP1A2 (ENSG00000018625)	IGSF8 (ENSG00000162729)	KCNJ9 (ENSG00000162728) ##18	PIGM (ENSG00000143315)	KCNJ10 (ENSG00000177807) ##22	SLAMF9 (ENSG00000162723)	IGSF9 (ENSG00000085552)	TAGLN2 (ENSG00000158710)	CFAP45 (ENSG00000213085)	VSIG8 (ENSG00000243284)	SLAMF8 (ENSG00000158714)	FCRL6 (ENSG00000181036)	DUSP23 (ENSG00000158716)	CRP (ENSG00000132693)	APCS (ENSG00000132703)	OR10J5 (ENSG00000184155)	OR10J1 (ENSG00000196184)	OR10J4 (ENSG00000249730)	OR10J3 (ENSG00000196266)	FCER1A (ENSG00000179639)
Pan	ANCESTRAL SPECIES		ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000154319.u.a.c.b	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00950000185781	ENSGT00910000147448	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163654	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372
Bonobo	MODERN SPECIES		SLAMF6 (ENSPPAG00000036502)	VANGL2 (ENSPPAG00000018476)	NHLH1 (ENSPPAG00000002987)	NCSTN (ENSPPAG00000032693)	ENSPPAG00000022285	COPA (ENSPPAG00000028679)	PEX19 (ENSPPAG00000038673)	DCAF8 (ENSPPAG00000008803)	ENSPPAG00000027731	PEA15 (ENSPPAG00000029002)	CASQ1 (ENSPPAG00000032076)	ATP1A4 (ENSPPAG00000028678)	ATP1A2 (ENSPPAG00000034264)	IGSF8 (ENSPPAG00000000240)	KCNJ9 (ENSPPAG00000034813) ##18	ENSPPAG00000038045 ##22	SLAMF9 (ENSPPAG00000033923)	IGSF9 (ENSPPAG00000038120)	ENSPPAG00000033877	CFAP45 (ENSPPAG00000034778)	VSIG8 (ENSPPAG00000037705)	DUSP23 (ENSPPAG00000034723)	ENSPPAG00000031805	APCS (ENSPPAG00000041630)	OR10J5 (ENSPPAG00000019195)	ENSPPAG00000039398	OR10J3 (ENSPPAG00000018051)	FCER1A (ENSPPAG00000027915)	ACKR1 (ENSPPAG00000032471)	CADM3 (ENSPPAG00000043482)	AIM2 (ENSPPAG00000036780)
Chimpanzee	MODERN SPECIES		VANGL2 (ENSPTRG00000001552)	NHLH1 (ENSPTRG00000045092)	NCSTN (ENSPTRG00000001550)	ENSPTRG00000049673	COPA (ENSPTRG00000001549)	PEX19 (ENSPTRG00000001548)	DCAF8 (ENSPTRG00000001546)	ENSPTRG00000047170	ENSPTRG00000047511	PEA15 (ENSPTRG00000001545)	CASQ1 (ENSPTRG00000001544)	ATP1A4 (ENSPTRG00000001542)	ATP1A2 (ENSPTRG00000048477)	IGSF8 (ENSPTRG00000001539)	KCNJ9 (ENSPTRG00000001538) ##18	ENSPTRG00000048956 ##22	SLAMF9 (ENSPTRG00000001535)	IGSF9 (ENSPTRG00000023194)	TAGLN2 (ENSPTRG00000001533)	CFAP45 (ENSPTRG00000034223)	VSIG8 (ENSPTRG00000001531)	SLAMF8 (ENSPTRG00000001530)	FCRL6 (ENSPTRG00000001529)	DUSP23 (ENSPTRG00000001528)	CRP (ENSPTRG00000001527)	APCS (ENSPTRG00000001525)	OR10J5 (ENSPTRG00000001522)	ENSPTRG00000045894	FCER1A (ENSPTRG00000001523)	ACKR1 (ENSPTRG00000001521)	CADM3 (ENSPTRG00000001520)
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES		IFI16 (ENSGGOG00000006123)	AIM2 (ENSGGOG00000006135)	CADM3 (ENSGGOG00000005133)	ACKR1 (ENSGGOG00000005139)	FCER1A (ENSGGOG00000021999)	OR10J3 (ENSGGOG00000003857)	ENSGGOG00000037710	ENSGGOG00000038043	OR10J1 (ENSGGOG00000040483)	OR10J5 (ENSGGOG00000003035)	APCS (ENSGGOG00000001492)	CRP (ENSGGOG00000025795)	DUSP23 (ENSGGOG00000014958)	ENSGGOG00000042828	ENSGGOG00000039506 ##22	ENSGGOG00000025860 ##22	PIGM (ENSGGOG00000028160)	KCNJ9 (ENSGGOG00000025489) ##18	IGSF8 (ENSGGOG00000004944)	ATP1A2 (ENSGGOG00000004949)	ATP1A4 (ENSGGOG00000013011)	CASQ1 (ENSGGOG00000014642)	PEA15 (ENSGGOG00000013024)	ENSGGOG00000036406	DCAF8 (ENSGGOG00000013028)	ENSGGOG00000041014	ENSGGOG00000037038	COPA (ENSGGOG00000003503)	ENSGGOG00000038132	NCSTN (ENSGGOG00000003518)	NHLH1 (ENSGGOG00000015736)
Gorilla	MODERN SPECIES		NCSTN (ENSGGOG00000003518)	ENSGGOG00000038132	COPA (ENSGGOG00000003503)	ENSGGOG00000037038	ENSGGOG00000041014	DCAF8 (ENSGGOG00000013028)	ENSGGOG00000036406	PEA15 (ENSGGOG00000013024)	CASQ1 (ENSGGOG00000014642)	ATP1A4 (ENSGGOG00000013011)	ATP1A2 (ENSGGOG00000004949)	IGSF8 (ENSGGOG00000004944)	KCNJ9 (ENSGGOG00000025489) ##18	PIGM (ENSGGOG00000028160)	ENSGGOG00000025860 ##22	ENSGGOG00000039506 ##22	ENSGGOG00000042828	DUSP23 (ENSGGOG00000014958)	CRP (ENSGGOG00000025795)	APCS (ENSGGOG00000001492)	OR10J5 (ENSGGOG00000003035)	OR10J1 (ENSGGOG00000040483)	ENSGGOG00000038043	ENSGGOG00000037710	OR10J3 (ENSGGOG00000003857)	FCER1A (ENSGGOG00000021999)	ACKR1 (ENSGGOG00000005139)	CADM3 (ENSGGOG00000005133)	AIM2 (ENSGGOG00000006135)	IFI16 (ENSGGOG00000006123)	PYDC5 (ENSGGOG00000040558)
Cercopithecidae	ANCESTRAL SPECIES	22	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Rhinopithecus	ANCESTRAL SPECIES	169	ENSGT01030000234540.A.a.b	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B
Black snub-nosed monkey	MODERN SPECIES	2638	CD48 (ENSRBIG00000033502)	SLAMF1 (ENSRBIG00000034311)	CD84 (ENSRBIG00000042095)	SLAMF6 (ENSRBIG00000042952)	VANGL2 (ENSRBIG00000029461)	NHLH1 (ENSRBIG00000017350)	NCSTN (ENSRBIG00000031701)	COPA (ENSRBIG00000029308)	PEX19 (ENSRBIG00000043955)	DCAF8 (ENSRBIG00000042492)	PEA15 (ENSRBIG00000035032)	CASQ1 (ENSRBIG00000036913)	ATP1A4 (ENSRBIG00000028949)	IGSF8 (ENSRBIG00000038288)	KCNJ9 (ENSRBIG00000034910) ##18	ENSRBIG00000026750 ##22	SLAMF9 (ENSRBIG00000029033)	IGSF9 (ENSRBIG00000036697)	TAGLN2 (ENSRBIG00000040928)	CFAP45 (ENSRBIG00000027659)	VSIG8 (ENSRBIG00000044934)	SLAMF8 (ENSRBIG00000041941)	FCRL6 (ENSRBIG00000017071)	DUSP23 (ENSRBIG00000027685)	CRP (ENSRBIG00000040716)
Golden snub-nosed monkey	MODERN SPECIES	907	SLAMF1 (ENSRROG00000038292)	CD84 (ENSRROG00000029813)	SLAMF6 (ENSRROG00000038821)	VANGL2 (ENSRROG00000045553)	NHLH1 (ENSRROG00000025371)	NCSTN (ENSRROG00000032813)	COPA (ENSRROG00000008744)	PEX19 (ENSRROG00000042032)	DCAF8 (ENSRROG00000044853)	PEA15 (ENSRROG00000035953)	CASQ1 (ENSRROG00000043167)	ATP1A4 (ENSRROG00000034817)	ATP1A2 (ENSRROG00000033472)	IGSF8 (ENSRROG00000036784)	KCNJ9 (ENSRROG00000045425) ##18	ENSRROG00000042383 ##22	SLAMF9 (ENSRROG00000032805)	IGSF9 (ENSRROG00000041941)	TAGLN2 (ENSRROG00000040627)	CFAP45 (ENSRROG00000032010)	VSIG8 (ENSRROG00000036238)	SLAMF8 (ENSRROG00000030911)	FCRL6 (ENSRROG00000040864)	DUSP23 (ENSRROG00000037492)	CRP (ENSRROG00000044933)	APCS (ENSRROG00000037754)	OR10J5 (ENSRROG00000034634)
Cercopithecinae	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Vervet Monkey	MODERN SPECIES	12	SLAMF1 (ENSCSAG00000002591)	CD84 (ENSCSAG00000002586)	SLAMF6 (ENSCSAG00000002582)	VANGL2 (ENSCSAG00000002577)	NHLH1 (ENSCSAG00000000087)	NCSTN (ENSCSAG00000002572)	COPA (ENSCSAG00000002563)	PEX19 (ENSCSAG00000002557)	DCAF8 (ENSCSAG00000002554)	PEA15 (ENSCSAG00000002551)	CASQ1 (ENSCSAG00000002548)	ATP1A4 (ENSCSAG00000002543)	ATP1A2 (ENSCSAG00000002527)	IGSF8 (ENSCSAG00000002518)	KCNJ9 (ENSCSAG00000002515) ##18	KCNJ10 (ENSCSAG00000000085) ##22	PIGM (ENSCSAG00000000083)	SLAMF9 (ENSCSAG00000002512)	IGSF9 (ENSCSAG00000002507)	TAGLN2 (ENSCSAG00000002493)	ENSCSAG00000000081	CFAP45 (ENSCSAG00000002489)	VSIG8 (ENSCSAG00000002485)	SLAMF8 (ENSCSAG00000002478)	FCRL6 (ENSCSAG00000002469)	DUSP23 (ENSCSAG00000002463)	CRP (ENSCSAG00000002458)	APCS (ENSCSAG00000002457)	FCER1A (ENSCSAG00000002450)	ACKR1 (ENSCSAG00000000079)	CADM3 (ENSCSAG00000002448)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372
Olive baboon	MODERN SPECIES		CD48 (ENSPANG00000016675)	SLAMF1 (ENSPANG00000035298)	CD84 (ENSPANG00000024052)	SLAMF6 (ENSPANG00000004246)	VANGL2 (ENSPANG00000030817)	NHLH1 (ENSPANG00000011970)	NCSTN (ENSPANG00000003878)	COPA (ENSPANG00000005347)	PEX19 (ENSPANG00000010231)	DCAF8 (ENSPANG00000016333)	PEA15 (ENSPANG00000008809)	CASQ1 (ENSPANG00000005566)	ATP1A2 (ENSPANG00000013865)	IGSF8 (ENSPANG00000008350)	KCNJ9 (ENSPANG00000002430) ##18	ENSPANG00000035209 ##22	SLAMF9 (ENSPANG00000022213)	IGSF9 (ENSPANG00000014850)	TAGLN2 (ENSPANG00000029669)	CFAP45 (ENSPANG00000025935)	VSIG8 (ENSPANG00000022722)	SLAMF8 (ENSPANG00000011200)	FCRL6 (ENSPANG00000003626)	DUSP23 (ENSPANG00000030858)	CRP (ENSPANG00000016772)	ENSPANG00000037377	ENSPANG00000043887	FCER1A (ENSPANG00000020302)	ENSPANG00000019563	AIM2 (ENSPANG00000022416)	PYHIN1 (ENSPANG00000024682)
Cercopithecinae_d	ANCESTRAL SPECIES	33	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372
Sooty mangabey	MODERN SPECIES	144	SLAMF1 (ENSCATG00000043147)	CD84 (ENSCATG00000045140)	SLAMF6 (ENSCATG00000029325)	VANGL2 (ENSCATG00000030524)	NHLH1 (ENSCATG00000019382)	NCSTN (ENSCATG00000036360)	COPA (ENSCATG00000015423)	PEX19 (ENSCATG00000036619)	DCAF8 (ENSCATG00000030370)	PEA15 (ENSCATG00000042517)	CASQ1 (ENSCATG00000031877)	ATP1A4 (ENSCATG00000036266)	ATP1A2 (ENSCATG00000043418)	IGSF8 (ENSCATG00000031759)	KCNJ9 (ENSCATG00000025946) ##18	ENSCATG00000040133 ##22	SLAMF9 (ENSCATG00000016332)	IGSF9 (ENSCATG00000036216)	TAGLN2 (ENSCATG00000037697)	CFAP45 (ENSCATG00000042643)	VSIG8 (ENSCATG00000044066)	SLAMF8 (ENSCATG00000044031)	FCRL6 (ENSCATG00000036471)	DUSP23 (ENSCATG00000038538)	CRP (ENSCATG00000032411)	APCS (ENSCATG00000030832)	OR10J5 (ENSCATG00000038110)	OR10J1 (ENSCATG00000038190)
Drill	MODERN SPECIES	1687		SLAMF6 (ENSMLEG00000037139)	VANGL2 (ENSMLEG00000000080)	NHLH1 (ENSMLEG00000023370)	NCSTN (ENSMLEG00000031499)	COPA (ENSMLEG00000031866)	PEX19 (ENSMLEG00000031157)	DCAF8 (ENSMLEG00000027596)	PEA15 (ENSMLEG00000004778)	ENSMLEG00000039695	ENSMLEG00000039063	ATP1A4 (ENSMLEG00000034980)	ATP1A2 (ENSMLEG00000028315)	IGSF8 (ENSMLEG00000039495)	KCNJ9 (ENSMLEG00000033418) ##18	ENSMLEG00000041424 ##22	SLAMF9 (ENSMLEG00000001751)	IGSF9 (ENSMLEG00000004555)	TAGLN2 (ENSMLEG00000038384)	CFAP45 (ENSMLEG00000036314)	VSIG8 (ENSMLEG00000030964)	SLAMF8 (ENSMLEG00000041380)	FCRL6 (ENSMLEG00000035007)	DUSP23 (ENSMLEG00000030550)	CRP (ENSMLEG00000036486)
Macaca	ANCESTRAL SPECIES		ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000162870	ENSGT01050000244808.A.b.a.b
Macaca_a	ANCESTRAL SPECIES		ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00910000147448	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT00390000005534.b.b.c.b.a.a.b.a.b	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886.`b.a	ENSGT00940000170471.A.b.b.a.a	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b.b	ENSGT01050000244808.A.b.a.b	ENSGT00390000006372
Crab-eating macaque	MODERN SPECIES		CD84 (ENSMFAG00000032304)	SLAMF6 (ENSMFAG00000032557)	VANGL2 (ENSMFAG00000033897)	NHLH1 (ENSMFAG00000064079)	NCSTN (ENSMFAG00000003392)	COPA (ENSMFAG00000031873)	PEX19 (ENSMFAG00000041851)	DCAF8 (ENSMFAG00000040517)	PEA15 (ENSMFAG00000033624)	ENSMFAG00000061041	ENSMFAG00000036087	ATP1A4 (ENSMFAG00000031296)	ENSMFAG00000057290	IGSF8 (ENSMFAG00000036621)	ENSMFAG00000030757 ##18	KCNJ10 (ENSMFAG00000052965) ##22	PIGM (ENSMFAG00000055275)	ENSMFAG00000063512	SLAMF9 (ENSMFAG00000044181)	IGSF9 (ENSMFAG00000000704)	TAGLN2 (ENSMFAG00000040025)	ENSMFAG00000056485	CFAP45 (ENSMFAG00000041889)	VSIG8 (ENSMFAG00000003273)	SLAMF8 (ENSMFAG00000044324)	FCRL6 (ENSMFAG00000039265)	DUSP23 (ENSMFAG00000043752)	CRP (ENSMFAG00000041764)	APCS (ENSMFAG00000057662)	FCER1A (ENSMFAG00000059830)	ACKR1 (ENSMFAG00000050751)
Rhesus	MODERN SPECIES		SLAMF1 (ENSMMUG00000015809)	CD84 (ENSMMUG00000015470)	SLAMF6 (ENSMMUG00000015601)	VANGL2 (ENSMMUG00000020295)	NCSTN (ENSMMUG00000021856)	NHLH1 (ENSMMUG00000021865)	COPA (ENSMMUG00000021854)	DCAF8 (ENSMMUG00000017841)	PEA15 (ENSMMUG00000017838)	ENSMMUG00000061573	CASQ1 (ENSMMUG00000056833)	ATP1A2 (ENSMMUG00000017833)	IGSF8 (ENSMMUG00000031542)	KCNJ9 (ENSMMUG00000054510) ##18	ENSMMUG00000054927	KCNJ10 (ENSMMUG00000046470) ##22	PIGM (ENSMMUG00000047089)	ENSMMUG00000052181	SLAMF9 (ENSMMUG00000004707)	IGSF9 (ENSMMUG00000004706)	TAGLN2 (ENSMMUG00000040609)	ENSMMUG00000052448	CFAP45 (ENSMMUG00000011342)	VSIG8 (ENSMMUG00000011340)	SLAMF8 (ENSMMUG00000011338)	FCRL6 (ENSMMUG00000011335)	DUSP23 (ENSMMUG00000018444)	CRP (ENSMMUG00000008922)	APCS (ENSMMUG00000006685)	ENSMMUG00000053632	FCER1A (ENSMMUG00000013428)
Pig-tailed macaque	MODERN SPECIES	262	SLAMF1 (ENSMNEG00000036395)	CD84 (ENSMNEG00000039625)	SLAMF6 (ENSMNEG00000043020)	VANGL2 (ENSMNEG00000030653)	NHLH1 (ENSMNEG00000014520)	NCSTN (ENSMNEG00000043103)	COPA (ENSMNEG00000028029)	PEX19 (ENSMNEG00000041680)	DCAF8 (ENSMNEG00000045420)	PEA15 (ENSMNEG00000041353)	CASQ1 (ENSMNEG00000028911)	ATP1A4 (ENSMNEG00000032619)	ATP1A2 (ENSMNEG00000035806)	IGSF8 (ENSMNEG00000026454)	KCNJ9 (ENSMNEG00000044649) ##18	ENSMNEG00000033308 ##22	SLAMF9 (ENSMNEG00000031100)	IGSF9 (ENSMNEG00000012260)	TAGLN2 (ENSMNEG00000045054)	CFAP45 (ENSMNEG00000001599)	VSIG8 (ENSMNEG00000034921)	SLAMF8 (ENSMNEG00000031798)	FCRL6 (ENSMNEG00000039197)	DUSP23 (ENSMNEG00000042678)	CRP (ENSMNEG00000043011)	APCS (ENSMNEG00000042779)	OR10J5 (ENSMNEG00000037423)	OR10J1 (ENSMNEG00000032157)	OR10J3 (ENSMNEG00000042318)	FCER1A (ENSMNEG00000017791)	ACKR1 (ENSMNEG00000005830)
Atlantogenata	ANCESTRAL SPECIES	15	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163654	ENSGT00940000162870
Xenarthra	ANCESTRAL SPECIES	15	ENSGT01030000234540.A.a.b	ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174
Armadillo	MODERN SPECIES	494	SLAMF1 (ENSDNOG00000019813)	ENSDNOG00000033740	CD84 (ENSDNOG00000030743)	ENSDNOG00000016959	VANGL2 (ENSDNOG00000037928)	NHLH1 (ENSDNOG00000038600)	NCSTN (ENSDNOG00000039551)	COPA (ENSDNOG00000014960)	PEX19 (ENSDNOG00000033874)	DCAF8 (ENSDNOG00000014951)	PEA15 (ENSDNOG00000014937)	CASQ1 (ENSDNOG00000014919)	ATP1A2 (ENSDNOG00000035584)	IGSF8 (ENSDNOG00000043453)	KCNJ9 (ENSDNOG00000004058) ##18	KCNJ10 (ENSDNOG00000005200) ##22	PIGM (ENSDNOG00000005206)	SLAMF9 (ENSDNOG00000046357)	IGSF9 (ENSDNOG00000006352)	TAGLN2 (ENSDNOG00000046136)	CFAP45 (ENSDNOG00000006341)
Afrotheria	ANCESTRAL SPECIES	87			ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163654	ENSGT00940000162870
Afrotheria_a	ANCESTRAL SPECIES	89			ENSGT01030000234540.D	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT00390000012496.b	ENSGT00940000162622	ENSGT00390000014633	ENSGT00940000155451	ENSGT00390000010993	ENSGT00950000182900.D.d.a	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000162378	ENSGT00940000159936	ENSGT00940000161314	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00390000017728	ENSGT01030000234540.B.a.a.a.b.a.b	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174	ENSGT00940000161712	ENSGT01030000234540.C	ENSGT01050000244808.A.a	ENSGT00940000161329	ENSGT01100000263515.a.b.a.b.b.h.b	ENSGT01100000263515.a.b.a.b.b.h.a.b	ENSGT00940000159272.B	ENSGT00940000163973	ENSGT00940000163654	ENSGT00940000162870
Elephant	MODERN SPECIES	325	SLAMF7 (ENSLAFG00000005102)	ENSLAFG00000005100	SLAMF1 (ENSLAFG00000008307)	CD84 (ENSLAFG00000031769)	VANGL2 (ENSLAFG00000022574)	NHLH1 (ENSLAFG00000011163)	NCSTN (ENSLAFG00000011160)	COPA (ENSLAFG00000011150)	PEX19 (ENSLAFG00000008556)	DCAF8 (ENSLAFG00000005658)	PEA15 (ENSLAFG00000022152)	CASQ1 (ENSLAFG00000006462)	ATP1A4 (ENSLAFG00000000495)	ATP1A2 (ENSLAFG00000000490)	IGSF8 (ENSLAFG00000000487)	KCNJ10 (ENSLAFG00000022248) ##22	PIGM (ENSLAFG00000000484)	SLAMF9 (ENSLAFG00000023241)	IGSF9 (ENSLAFG00000030174)	TAGLN2 (ENSLAFG00000020779)	CFAP45 (ENSLAFG00000004137)	VSIG8 (ENSLAFG00000007599)	SLAMF8 (ENSLAFG00000001163)	ENSLAFG00000026692	DUSP23 (ENSLAFG00000014105)	CRP (ENSLAFG00000029698)	APCS (ENSLAFG00000030778)	OR10J5 (ENSLAFG00000021971)	OR10J1 (ENSLAFG00000014770)	ENSLAFG00000031436	ENSLAFG00000025733
Sauria	ANCESTRAL SPECIES	60									ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000154757	ENSGT01020000230438.B.a.b	ENSGT01020000230438.B.b.b.a.j	ENSGT01020000230438.A.a.a.b	ENSGT01020000230438.A.a.a.a	ENSGT00390000010337.A	ENSGT00990000204431	ENSGT00950000182952.E	ENSGT00950000182904.a.a.b	ENSGT00390000003568	ENSGT00950000183007.a.a.b.eb	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083
Archelosauria	ANCESTRAL SPECIES	39	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000154757	ENSGT01020000230438.A.a.a.b	ENSGT01020000230438.A.a.a.a	ENSGT00390000010337.A	ENSGT00990000204431	ENSGT00950000182952.E	ENSGT00950000182904.a.a.b	ENSGT01030000235778	ENSGT00390000003568	ENSGT00950000183007.a.a.b.eb	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411
Cryptodira	ANCESTRAL SPECIES	20	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000154757.mb	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00390000011582	ENSGT00390000009272.r	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000156794	ENSGT00940000154412.B.a
Testudinoidea	ANCESTRAL SPECIES	17	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT01050000244808.D.fb.a.b	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00940000159186.fb	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00390000011582	ENSGT00390000009272.r	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000156794	ENSGT00940000154412.B.a	ENSGT00940000158641
Testudinidae	ANCESTRAL SPECIES	3							ENSGT01050000244808.D.fb.a.a	ENSGT01050000244808.D.fb.a.b	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00940000159186.fb	ENSGT00960000192506	ENSGT00940000161394	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00390000011582	ENSGT00390000009272.r	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000156794	ENSGT00940000154412.B.a	ENSGT00940000158641
Goode s thornscrub tortoise	MODERN SPECIES	16	NDUFS2 (ENSGEVG00005014172)	FCER1G (ENSGEVG00005014145)	ENSGEVG00005014086	ENSGEVG00005014020	ENSGEVG00005013670	ENSGEVG00005013564	ENSGEVG00005013497	ENSGEVG00005013462	PEX19 (ENSGEVG00005013421)	ENSGEVG00005013345	PEA15 (ENSGEVG00005013304)	CASQ1 (ENSGEVG00005013090)	ATP1A2 (ENSGEVG00005012712)	IGSF8 (ENSGEVG00005012513)	KCNJ9 (ENSGEVG00005012473) ##18	KCNJ10 (ENSGEVG00005012452) ##22	ENSGEVG00005012439	ENSGEVG00005012406	ENSGEVG00005012307	ENSGEVG00005012353	TSTD1 (ENSGEVG00005012275)	USF1 (ENSGEVG00005012245)	ARHGAP30 (ENSGEVG00005011976)	NECTIN4 (ENSGEVG00005011864)	ENSGEVG00005011800	ENSGEVG00005019330	KLHDC9 (ENSGEVG00005019304)	PFDN2 (ENSGEVG00005019297)	NIT1 (ENSGEVG00005019292)	DEDD (ENSGEVG00005019287)	GABPB2 (ENSGEVG00005019277)
Abingdon island giant tortoise	MODERN SPECIES	1944						ENSCABG00000013109	ENSCABG00000013113	PEX19 (ENSCABG00000013114)	ENSCABG00000013116	PEA15 (ENSCABG00000013120)	CASQ1 (ENSCABG00000013124)	ATP1A2 (ENSCABG00000013152)	ENSCABG00000013358	IGSF8 (ENSCABG00000013367)	KCNJ9 (ENSCABG00000013397) ##18	KCNJ10 (ENSCABG00000013398) ##22	ENSCABG00000013399	F11R (ENSCABG00000013400)	ENSCABG00000013401	TSTD1 (ENSCABG00000013403)
Emydidae	ANCESTRAL SPECIES	18	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT01050000244808.D.fb.a.b	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00940000159186.fb	ENSGT00940000161394	ENSGT00940000156392.b	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00390000011582	ENSGT00390000009272.r	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000156794	ENSGT00940000154412.B.a	ENSGT00940000158641
Three-toed box turtle	MODERN SPECIES	168								ENSTMTG00000010205	PEX19 (ENSTMTG00000010489)	ENSTMTG00000010524	ENSTMTG00000010725	CASQ1 (ENSTMTG00000010738)	ATP1A2 (ENSTMTG00000011221)	IGSF8 (ENSTMTG00000015999)	KCNJ9 (ENSTMTG00000016155) ##18	KCNJ10 (ENSTMTG00000016171) ##22	ENSTMTG00000016184
painted turtle	MODERN SPECIES	738	B4GALT3 (ENSCPBG00000009254)	ENSCPBG00000009250	ADAMTS4 (ENSCPBG00000009246)	NDUFS2 (ENSCPBG00000009243)	ENSCPBG00000009238	ENSCPBG00000009229	ENSCPBG00000009226	ENSCPBG00000009220	PEX19 (ENSCPBG00000009213)	ENSCPBG00000009206	PEA15 (ENSCPBG00000009203)	CASQ1 (ENSCPBG00000009200)	ATP1A2 (ENSCPBG00000009198)	IGSF8 (ENSCPBG00000009194)	KCNJ9 (ENSCPBG00000009190) ##18	KCNJ10 (ENSCPBG00000009188) ##22	ENSCPBG00000009186	ENSCPBG00000009184	ENSCPBG00000009182	F11R (ENSCPBG00000009178)	ENSCPBG00000009174	ENSCPBG00000009171	ENSCPBG00000009167	USF1 (ENSCPBG00000009165)	ARHGAP30 (ENSCPBG00000009161)	NECTIN4 (ENSCPBG00000009148)	ENSCPBG00000009137	ENSCPBG00000009117	KLHDC9 (ENSCPBG00000009108)	PFDN2 (ENSCPBG00000009101)	NIT1 (ENSCPBG00000009095)
Chinese turtle	MODERN SPECIES	480							SSR2 (ENSPSIG00000005367)	ENSPSIG00000005129	ENSPSIG00000004538	PEA15 (ENSPSIG00000004518)	CASQ1 (ENSPSIG00000004266)	ATP1A2 (ENSPSIG00000011512)	IGSF8 (ENSPSIG00000011401)	KCNJ9 (ENSPSIG00000011233) ##18	ENSPSIG00000000747	KCNJ10 (ENSPSIG00000000737) ##22	ENSPSIG00000010450	ENSPSIG00000010442	ENSPSIG00000010363	F11R (ENSPSIG00000009531)	ENSPSIG00000009202	TSTD1 (ENSPSIG00000008713)	ENSPSIG00000008677	USF1 (ENSPSIG00000008116)	NECTIN4 (ENSPSIG00000007516)	ENSPSIG00000007508	ENSPSIG00000007156	ENSPSIG00000006921	ENSPSIG00000006911	NDUFS2 (ENSPSIG00000006065)	ADAMTS4 (ENSPSIG00000005745)
Archosauria	ANCESTRAL SPECIES	49	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000008714.a
Aves	ANCESTRAL SPECIES	36	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000262565	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000161521	ENSGT00940000159364.q	ENSGT00390000008281	ENSGT00940000154716	ENSGT00950000183212.C
African ostrich	MODERN SPECIES	128	ENSSCUG00000001465	CFAP126 (ENSSCUG00000001469)	SDHC (ENSSCUG00000001472)	MPZ (ENSSCUG00000001473)	NR1I3 (ENSSCUG00000001475)	USP21 (ENSSCUG00000001479)	PPOX (ENSSCUG00000001485)	B4GALT3 (ENSSCUG00000001492)	NDUFS2 (ENSSCUG00000001504)	ENSSCUG00000001513	ENSSCUG00000001518	PEA15 (ENSSCUG00000001522)	CASQ1 (ENSSCUG00000001531)	ATP1A2 (ENSSCUG00000001550)	KCNJ9 (ENSSCUG00000001591) ##18	KCNJ10 (ENSSCUG00000001593) ##22	F11R (ENSSCUG00000001595)	USF1 (ENSSCUG00000001600)	NECTIN4 (ENSSCUG00000001605)	ENSSCUG00000001607	ENSSCUG00000001608	NIT1 (ENSSCUG00000001609)	DEDD (ENSSCUG00000001610)	S100A10 (ENSSCUG00000001612)	THEM4 (ENSSCUG00000001616)	TDRKH (ENSSCUG00000001620)	MRPL9 (ENSSCUG00000001621)	SNX27 (ENSSCUG00000001623)	TUFT1 (ENSSCUG00000001627)	ENSSCUG00000001628	CGN (ENSSCUG00000001630)
Neognathae	ANCESTRAL SPECIES	36	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000262565	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00960000190443	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000161521	ENSGT00940000159364.q	ENSGT00390000008281	ENSGT00940000154716.g
Galloanserae	ANCESTRAL SPECIES	57										ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00960000190443
Anatidae	ANCESTRAL SPECIES	162															ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186
Pink-footed goose	MODERN SPECIES	704															KCNJ9 (ENSABRG00000019170) ##18	KCNJ10 (ENSABRG00000019166) ##22	ENSABRG00000019161	F11R (ENSABRG00000019151)
Duck	MODERN SPECIES	2054																KCNJ10 (ENSAPLG00000021273) ##22	ENSAPLG00000025167
Phasianidae	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Turkey	MODERN SPECIES	1108																ENSMGAG00000016172 ##22	USF1 (ENSMGAG00000003219)	ENSMGAG00000019952	NECTIN4 (ENSMGAG00000017622)
Neognathae_b	ANCESTRAL SPECIES	34	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00960000190443	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000161521	ENSGT00940000159364.q	ENSGT00390000008281	ENSGT00940000154716.g
Neognathae_c	ANCESTRAL SPECIES	36	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000155545.a	ENSGT00390000008744	ENSGT00940000158549	ENSGT00940000164842	ENSGT00940000160966	ENSGT00390000009529	ENSGT01090000260265	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00960000190443	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000161521	ENSGT00940000159364.q	ENSGT00390000008281	ENSGT00940000154716.g	ENSGT00950000183212.C
Golden eagle	DUPLICATION
Golden eagle	MODERN SPECIES	25	UFC1 (ENSACCG00020009099)	USP21 (ENSACCG00020009111)	PPOX (ENSACCG00020009141)	B4GALT3 (ENSACCG00020009161)	ENSACCG00020009181	ADAMTS4 (ENSACCG00020009251)	NDUFS2 (ENSACCG00020009389)	ENSACCG00020009434	ENSACCG00020009443	PEX19 (ENSACCG00020009457)	ENSACCG00020009475	PEA15 (ENSACCG00020009491)	CASQ1 (ENSACCG00020009508)	ATP1A2 (ENSACCG00020009524)	KCNJ9 (ENSACCG00020009545) ##18	ENSACCG00020009552 ##22	ENSACCG00020009562 ##22	F11R (ENSACCG00020009590)	USF1 (ENSACCG00020009623)	ARHGAP30 (ENSACCG00020009675)	ENSACCG00020009701	NECTIN4 (ENSACCG00020009721)	ENSACCG00020009736	ENSACCG00020009758	NIT1 (ENSACCG00020009774)	PFDN2 (ENSACCG00020009785)	DEDD (ENSACCG00020009795)	S100A10 (ENSACCG00020009802)	THEM4 (ENSACCG00020009822)	RORC (ENSACCG00020009840)	TDRKH (ENSACCG00020000374)
Golden eagle	MODERN SPECIES	25	USP21 (ENSACCG00020009111)	PPOX (ENSACCG00020009141)	B4GALT3 (ENSACCG00020009161)	ENSACCG00020009181	ADAMTS4 (ENSACCG00020009251)	NDUFS2 (ENSACCG00020009389)	ENSACCG00020009434	ENSACCG00020009443	PEX19 (ENSACCG00020009457)	ENSACCG00020009475	PEA15 (ENSACCG00020009491)	CASQ1 (ENSACCG00020009508)	ATP1A2 (ENSACCG00020009524)	KCNJ9 (ENSACCG00020009545) ##18	ENSACCG00020009552 ##22	ENSACCG00020009562 ##22	F11R (ENSACCG00020009590)	USF1 (ENSACCG00020009623)	ARHGAP30 (ENSACCG00020009675)	ENSACCG00020009701	NECTIN4 (ENSACCG00020009721)	ENSACCG00020009736	ENSACCG00020009758	NIT1 (ENSACCG00020009774)	PFDN2 (ENSACCG00020009785)	DEDD (ENSACCG00020009795)	S100A10 (ENSACCG00020009802)	THEM4 (ENSACCG00020009822)	RORC (ENSACCG00020009840)	TDRKH (ENSACCG00020000374)	MRPL9 (ENSACCG00020000392)
Passeriformes	ANCESTRAL SPECIES	51											ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00390000008281	ENSGT00940000154716.f.b	ENSGT00940000154716.f.a	ENSGT00950000183212.C	ENSGT00940000161521	ENSGT00940000159364.q
Great tit	MODERN SPECIES	116																KCNJ10 (ENSPMJG00000002037) ##22
Passeriformes_d	ANCESTRAL SPECIES	26	ENSGT01090000260003.a.b.b.a.a.a.b.b	ENSGT00390000005131	ENSGT00940000159779	ENSGT00390000006372	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT01100000263515.a.b.a.b.b.h.e.b.a	ENSGT00940000161329	ENSGT00940000160444	ENSGT00940000158886	ENSGT00730000111174.a	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000161521	ENSGT00940000159364.q.a.a	ENSGT00390000008281	ENSGT00940000154716.f.b	ENSGT00940000154716.f.a	ENSGT00950000183212.C
Flycatcher	MODERN SPECIES	233																ENSFALG00000025338 ##22	F11R (ENSFALG00000023236)	ENSFALG00000003435	ENSFALG00000025235	ENSFALG00000003427
Passeriformes_g	ANCESTRAL SPECIES	27	ENSGT00940000155413	ENSGT01090000260003.a.b.b.a.a.a.b.b	ENSGT00390000005131	ENSGT00940000159779	ENSGT00390000006372	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT01100000263515.a.b.a.b.b.h.e.b.a	ENSGT00940000161329	ENSGT00940000160444	ENSGT00940000158886	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099.k	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000160047	ENSGT00940000159364.q.a.a	ENSGT00390000008281	ENSGT00940000154716.f.b	ENSGT00940000154716.f.a	ENSGT00950000183212.C	ENSGT00390000002799
Passeroidea	ANCESTRAL SPECIES	28	ENSGT00940000155413	ENSGT01090000260003.a.b.b.a.a.a.b.b	ENSGT00390000005131	ENSGT00940000159779	ENSGT00390000006372	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT01100000263515.a.b.a.b.b.h.e.b.a	ENSGT00940000161329	ENSGT00940000160444	ENSGT00940000158886	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00940000159936	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT00390000009272.q	ENSGT00550000075099.k	ENSGT00390000009272.r	ENSGT00390000008714.a	ENSGT00940000154197	ENSGT00940000159364.q.a.a	ENSGT00390000008281	ENSGT00940000154716.f.b	ENSGT00940000154716.f.a	ENSGT00950000183212.C	ENSGT00390000002799
Zebra finch	MODERN SPECIES	18	ENSA (ENSTGUG00000022038)	MCL1 (ENSTGUG00000022286)	GLMP (ENSTGUG00000019667)	CADM3 (ENSTGUG00000021756)	ACKR1 (ENSTGUG00000025315)	ENSTGUG00000016438	DUSP23 (ENSTGUG00000016440)	ENSTGUG00000020691	IGSF9 (ENSTGUG00000026729)	TAGLN2 (ENSTGUG00000027715)	PEX19 (ENSTGUG00000029746)	ENSTGUG00000027613	PEA15 (ENSTGUG00000028006)	ATP1A2 (ENSTGUG00000027873)	KCNJ9 (ENSTGUG00000000586) ##18	KCNJ10 (ENSTGUG00000020285) ##22	F11R (ENSTGUG00000019634)	USF1 (ENSTGUG00000019311)	ARHGAP30 (ENSTGUG00000023219)	ENSTGUG00000028866	ENSTGUG00000027626	ENSTGUG00000025300	ENSTGUG00000021807	ENSTGUG00000028568	ENSTGUG00000025716	ENSTGUG00000026768	ENSTGUG00000022695	ENSTGUG00000021225	ENSTGUG00000024765	ENSTGUG00000020684	SNX27 (ENSTGUG00000004407)
Common canary	MODERN SPECIES	601																KCNJ10 (ENSSCAG00000001837) ##22
Medium ground finch	MODERN SPECIES	459															KCNJ9 (ENSGFOG00000009105) ##18	KCNJ10 (ENSGFOG00000009098) ##22	ENSGFOG00000009094	ENSGFOG00000009088
Lepidosauria	ANCESTRAL SPECIES	120				ENSGT00940000160963	ENSGT00940000162271	ENSGT00940000158350	ENSGT00950000185615	ENSGT00440000034367	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000154757	ENSGT00950000183007.a.a.b.eb	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b
tuatara	MODERN SPECIES	1242	BBS1 (ENSSPUG00000008555)	DPP3 (ENSSPUG00000008593)	ENSSPUG00000008615	ENSSPUG00000008620	ENSSPUG00000008632	DRAP1 (ENSSPUG00000008663)	ENSSPUG00000008683	ENSSPUG00000008692	PEX19 (ENSSPUG00000008704)	ENSSPUG00000008724	ENSSPUG00000008738	CASQ1 (ENSSPUG00000008752)	ATP1A2 (ENSSPUG00000008768)	IGSF8 (ENSSPUG00000008852)	KCNJ9 (ENSSPUG00000008937) ##18	KCNJ10 (ENSSPUG00000008948) ##22	ITLN1 (ENSSPUG00000008959)	F11R (ENSSPUG00000008978)	TSTD1 (ENSSPUG00000009030)	USF1 (ENSSPUG00000009059)	ARHGAP30 (ENSSPUG00000009090)	ENSSPUG00000009100	NECTIN4 (ENSSPUG00000009112)	ENSSPUG00000009152	ENSSPUG00000009163	SF3B2 (ENSSPUG00000009198)	ENSSPUG00000009365	ENSSPUG00000009379	SART1 (ENSSPUG00000009399)	EIF1AD (ENSSPUG00000009425)	BANF1 (ENSSPUG00000009439)
Episquamata	ANCESTRAL SPECIES	17	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000162271	ENSGT00940000158350	ENSGT00440000034367	ENSGT00950000185615	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT01030000234540.B.b.b	ENSGT00950000183112.b.b.a	ENSGT00940000161215	ENSGT00940000165753	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893
Laterata	ANCESTRAL SPECIES	35	ENSGT00940000159724	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000162271	ENSGT00940000158350	ENSGT00950000185615	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT01030000234540.B.b.b	ENSGT00950000183112.b.b.a	ENSGT00940000161215	ENSGT00940000165753	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000020489	ENSPMRG00000020479	ENSPMRG00000020464	ENSPMRG00000020459	ETV3 (ENSPMRG00000020453)	ETV3L (ENSPMRG00000020421)	ARHGEF11 (ENSPMRG00000020342)	PEX19 (ENSPMRG00000020317)	ENSPMRG00000020309	PEA15 (ENSPMRG00000020306)	CASQ1 (ENSPMRG00000020298)	ATP1A2 (ENSPMRG00000020275)	IGSF8 (ENSPMRG00000020263)	ENSPMRG00000020257	KCNJ9 (ENSPMRG00000020253) ##18	KCNJ10 (ENSPMRG00000020248) ##22	KIRREL1 (ENSPMRG00000020238)	ENSPMRG00000020235	ENSPMRG00000020232	CRABP2 (ENSPMRG00000020225)	ENSPMRG00000020216	ENSPMRG00000020214	HDGF (ENSPMRG00000020210)	PRCC (ENSPMRG00000020202)	ENSPMRG00000020198	INSRR (ENSPMRG00000020188)	ENSPMRG00000020177	NTRK1 (ENSPMRG00000020172)
Toxicofera	ANCESTRAL SPECIES	27	ENSGT00940000159724	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000162271	ENSGT00940000158350	ENSGT00440000034367	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT00950000183112.b.b.a	ENSGT00950000186203	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893	ENSGT00390000018360	ENSGT00500000045038
Elapidae	ANCESTRAL SPECIES	25	ENSGT00940000159724	ENSGT00960000189327	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000158350	ENSGT00440000034367	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT00950000186203	ENSGT00950000183112.b.b.a	ENSGT00940000161215	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893	ENSGT00390000018360
Indian cobra	MODERN SPECIES	17	ISG20L2 (ENSNNAG00000014333)	ENSNNAG00000014352	METTL25B (ENSNNAG00000014375)	MRPL24 (ENSNNAG00000014387)	ETV3 (ENSNNAG00000014408)	ARHGEF11 (ENSNNAG00000014477)	LRRC71 (ENSNNAG00000015656)	PEX19 (ENSNNAG00000015677)	ENSNNAG00000015717	PEA15 (ENSNNAG00000015745)	CASQ1 (ENSNNAG00000015756)	ATP1A2 (ENSNNAG00000015779)	ENSNNAG00000015796	IGSF8 (ENSNNAG00000015805)	KCNJ9 (ENSNNAG00000015815) ##18	KCNJ10 (ENSNNAG00000015824) ##22	KIRREL1 (ENSNNAG00000015845)	ENSNNAG00000015945	ENSNNAG00000015963	ENSNNAG00000015975	ENSNNAG00000015985	BOLA1 (ENSNNAG00000015987)	SV2A (ENSNNAG00000016009)	SF3B4 (ENSNNAG00000016086)	MTMR11 (ENSNNAG00000016103)	OTUD7B (ENSNNAG00000016147)	VPS45 (ENSNNAG00000016162)	PLEKHO1 (ENSNNAG00000016181)	ANP32E (ENSNNAG00000016195)	APH1A (ENSNNAG00000016205)	CA14 (ENSNNAG00000016244)
Elapidae_a	ANCESTRAL SPECIES	51	ENSGT00940000159724	ENSGT00960000189327	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000158350	ENSGT00440000034367	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT00950000183112.b.b.a	ENSGT00950000186203	ENSGT00940000161215	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028.k	ENSGT00550000075028.l	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893
Blue-lipped sea krait	MODERN SPECIES	3056	ENSLLTG00000014315	METTL25B (ENSLLTG00000014319)	MRPL24 (ENSLLTG00000014324)	ETV3 (ENSLLTG00000014327)	ARHGEF11 (ENSLLTG00000014363)	LRRC71 (ENSLLTG00000015226)	PEX19 (ENSLLTG00000015236)	ENSLLTG00000015245	PEA15 (ENSLLTG00000015255)	CASQ1 (ENSLLTG00000015259)	ATP1A2 (ENSLLTG00000015261)	ENSLLTG00000015268	IGSF8 (ENSLLTG00000015275)	ENSLLTG00000015282	KCNJ9 (ENSLLTG00000015287) ##18	KCNJ10 (ENSLLTG00000015290) ##22	KIRREL1 (ENSLLTG00000015298)	ENSLLTG00000015303	ENSLLTG00000015306	ENSLLTG00000015308	BOLA1 (ENSLLTG00000015310)	SV2A (ENSLLTG00000015313)	SF3B4 (ENSLLTG00000015318)	MTMR11 (ENSLLTG00000015323)	OTUD7B (ENSLLTG00000015336)
Acanthophiinae	ANCESTRAL SPECIES	51	ENSGT00940000157619	ENSGT00940000159724	ENSGT00530000063745.a	ENSGT00390000014542	ENSGT00940000160963	ENSGT00940000158350	ENSGT00950000185615	ENSGT00390000010993	ENSGT00950000182900.D	ENSGT00390000000230	ENSGT00390000019377.a	ENSGT00940000159936	ENSGT01030000235556	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000155795	ENSGT00950000183112.b.b.a	ENSGT00950000186203	ENSGT00940000161215	ENSGT00510000048165	ENSGT00950000182940.b.a.b	ENSGT00870000136537	ENSGT00940000160276	ENSGT00940000159172	ENSGT00550000075028.l	ENSGT00530000063760.b	ENSGT00950000182907.a.a	ENSGT00390000002049.c.a	ENSGT00940000156893	ENSGT00390000018360
Eastern brown snake	MODERN SPECIES	133	ENSPTXG00000008805	METTL25B (ENSPTXG00000008806)	MRPL24 (ENSPTXG00000008809)	ETV3 (ENSPTXG00000008811)	ARHGEF11 (ENSPTXG00000008828)	ENSPTXG00000009163	ENSPTXG00000009166	PEX19 (ENSPTXG00000009170)	ENSPTXG00000009309	PEA15 (ENSPTXG00000009312)	ENSPTXG00000009313	ENSPTXG00000009317	ATP1A2 (ENSPTXG00000009335)	IGSF8 (ENSPTXG00000009576)	KCNJ9 (ENSPTXG00000009578) ##18	KCNJ10 (ENSPTXG00000009579) ##22	KIRREL1 (ENSPTXG00000009587)	ENSPTXG00000009596	ENSPTXG00000009601	ENSPTXG00000009602	ENSPTXG00000009604	BOLA1 (ENSPTXG00000009606)	SV2A (ENSPTXG00000009608)	SF3B4 (ENSPTXG00000009609)	MTMR11 (ENSPTXG00000009610)	OTUD7B (ENSPTXG00000009611)	VPS45 (ENSPTXG00000009612)	PLEKHO1 (ENSPTXG00000009613)	ANP32E (ENSPTXG00000009614)	ENSPTXG00000009615	CA14 (ENSPTXG00000009616)
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	1169																ENSNSUG00000008703 ##22
Mainland tiger snake	MODERN SPECIES	1168																ENSNSUG00000008701 ##22
Anura	ANCESTRAL SPECIES	83	ENSGT00940000160917	ENSGT00940000154947	ENSGT00940000154743.A.b	ENSGT00390000008859.b.c	ENSGT00900000141074	ENSGT00980000200493	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00940000164105	ENSGT00940000159088	ENSGT00940000160132	ENSGT00940000161314	ENSGT01080000257365.b.a.b.b ##18	ENSGT00990000203615.b.a.a.a.a ##22	ENSGT00940000159186	ENSGT00940000161394	ENSGT00940000157083	ENSGT00940000161411	ENSGT00940000157535	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT01010000229668
Frog	MODERN SPECIES	8	ENSXETG00000044582	hcn3 (ENSXETG00000017651)	pklr (ENSXETG00000013164)	fdps (ENSXETG00000040625)	ENSXETG00000041042	ENSXETG00000042098	ASH1L (ENSXETG00000048706)	dap3 (ENSXETG00000021441)	ENSXETG00000044089	msto1 (ENSXETG00000021439)	gon4l (ENSXETG00000021434)	syt11 (ENSXETG00000040089)	rit1 (ENSXETG00000012434)	XB5942349 [provisional:igsf8] (ENSXETG00000042336)	KCNJ9 (ENSXETG00000023557) ##18	kcnj10 (ENSXETG00000019842) ##22	f11r (ENSXETG00000047213)	usf1 (ENSXETG00000043784)	arhgap30 (ENSXETG00000019195)	NECTIN4 (ENSXETG00000047220)	ENSXETG00000049406	atp6v1al (ENSXETG00000048997)	ENSXETG00000049320	ENSXETG00000042103	ENSXETG00000048612	ENSXETG00000048213	ENSXETG00000042293	ENSXETG00000045719	pcgf1 (ENSXETG00000042648)
Leishan spiny toad	MODERN SPECIES	4	ENSLLEG00000016636	CLK2 (ENSLLEG00000016536)	ENSLLEG00000016054	PKLR (ENSLLEG00000015194)	FDPS (ENSLLEG00000015089)	RUSC1 (ENSLLEG00000014810)	ASH1L (ENSLLEG00000014671)	DAP3 (ENSLLEG00000014541)	MSTO1 (ENSLLEG00000014423)	SYT11 (ENSLLEG00000014291)	ENSLLEG00000013959	RIT1 (ENSLLEG00000013907)	ENSLLEG00000013882	IGSF8 (ENSLLEG00000013822)	KCNJ9 (ENSLLEG00000013674) ##18	KCNJ10 (ENSLLEG00000013630) ##22	ENSLLEG00000013537	ENSLLEG00000012875	ENSLLEG00000012822	DAAM1 (ENSLLEG00000012355)	ENSLLEG00000012279	UNC79 (ENSLLEG00000011997)	ASB2 (ENSLLEG00000011838)	ENSLLEG00000011823	PPP4R3A (ENSLLEG00000011256)	TC2N (ENSLLEG00000011079)	ENSLLEG00000011059	FBLN5 (ENSLLEG00000010940)	ENSLLEG00000010859	ENSLLEG00000010823	CPSF2 (ENSLLEG00000010714)
Coelacanth	MODERN SPECIES	738													ENSLACG00000022303	IGSF8 (ENSLACG00000015060)	KCNJ9 (ENSLACG00000014687) ##18	KCNJ10 (ENSLACG00000013883) ##22	ENSLACG00000013416	EIF3F (ENSLACG00000013140)	CFAP126 (ENSLACG00000022447)	SDHC (ENSLACG00000012901)	MPZ (ENSLACG00000012390)	NR1I3 (ENSLACG00000009851)	ENSLACG00000009555	TOMM40L (ENSLACG00000008779)	UFC1 (ENSLACG00000007373)	ENSLACG00000006258	ENSLACG00000005181	ppox (ENSLACG00000003882)	zgc:77880 (ENSLACG00000003072)	ADAMTS4 (ENSLACG00000002039)
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES	874															ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a ##22
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Cod	MODERN SPECIES	8	six7 (ENSGMOG00000009723)	b4gat1 (ENSGMOG00000009731)	nit1 (ENSGMOG00000009736)	pfdn2 (ENSGMOG00000024138)	ENSGMOG00000009747	ENSGMOG00000026430	ENSGMOG00000035973	ENSGMOG00000032768	ENSGMOG00000012148	prkd4 (ENSGMOG00000026702)	ENSGMOG00000012145	ENSGMOG00000012134	sf3b2 (ENSGMOG00000012131)	capn1 (ENSGMOG00000012126)	pnp5a (ENSGMOG00000002870)	ENSGMOG00000031716 ##22	ENSGMOG00000025520	ENSGMOG00000033725	ENSGMOG00000035997	ENSGMOG00000023217	ENSGMOG00000033215	ENSGMOG00000031402	ENSGMOG00000031887	ENSGMOG00000026609	ENSGMOG00000012881	ENSGMOG00000029094	f13a1b (ENSGMOG00000012890)	ENSGMOG00000031268	ENSGMOG00000027818	tex261 (ENSGMOG00000016945)	ENSGMOG00000024528
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Tiger tail seahorse	MODERN SPECIES	506	polr2b (ENSHCOG00000013588)	igfbp7 (ENSHCOG00000013565)	COX18 (ENSHCOG00000013555)	selenot2 (ENSHCOG00000013542)	rnf4 (ENSHCOG00000013524)	sqstm1 (ENSHCOG00000013492)	ENSHCOG00000013454	ENSHCOG00000000845	ENSHCOG00000013405	rnf130 (ENSHCOG00000013401)	F2RL3 (ENSHCOG00000013396)	exosc3 (ENSHCOG00000013389)	ENSHCOG00000000581	ENSHCOG00000013223	EBF4 (ENSHCOG00000013199)	KCNJ10 (ENSHCOG00000012863) ##22	ENSHCOG00000012821	ENSHCOG00000012806	ENSHCOG00000012781	sgms2b (ENSHCOG00000012755)	aimp1b (ENSHCOG00000000370)	ENSHCOG00000012693	ENSHCOG00000012673	ENSHCOG00000012670	wdr55 (ENSHCOG00000012660)	ENSHCOG00000012642	actn3a (ENSHCOG00000012609)	rbm14b (ENSHCOG00000012571)	ccs (ENSHCOG00000012499)	GAL3ST3 (ENSHCOG00000012476)	ENSHCOG00000012455
Otomorpha	ANCESTRAL SPECIES	831															ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22
Otophysi	ANCESTRAL SPECIES	3	ENSGT00390000005235	ENSGT00500000045074	ENSGT00390000018395	ENSGT00390000012355.A.b	ENSGT01030000234576.D.a.a.b.a.a.b.a.a	ENSGT01100000263495.A.a.b.b.a.a.a.b	ENSGT00940000161411	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.a	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000157535.m.b	ENSGT00980000199858	ENSGT00390000014633	ENSGT01100000263538.A.a.a.b.a.d	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22	ENSGT00940000162075.a.b	ENSGT00390000004964	ENSGT01050000244939.a.a.b.a.a	ENSGT00390000016277.b	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b	ENSGT00980000199825	ENSGT00950000182977.B.b.a.d.c.a	ENSGT00950000182977.B.b.a.d.c.b	ENSGT00940000160141	ENSGT00390000004859.d	ENSGT00390000004859.c	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f	ENSGT00950000183014.f.b.b.a.b.b
Characiphysae	ANCESTRAL SPECIES	34	ENSGT00500000045074	ENSGT00390000018395	ENSGT00390000012355.A.b	ENSGT01030000234576.D.a.a.b.a.a.b.a.a	ENSGT01100000263495.A.a.b.b.a.a.a.b	ENSGT00940000161411	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.a	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000157535.m.b	ENSGT00980000199858	ENSGT00390000014633	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263538.A.a.a.b.a.d	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22	ENSGT00940000162075.a.b	ENSGT00390000004964	ENSGT01050000244939.a.a.b.a.a	ENSGT00390000016277.b	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b	ENSGT00980000199825	ENSGT00950000182977.B.b.a.d.c.a	ENSGT00950000182977.B.b.a.d.c.b	ENSGT00940000160141	ENSGT00390000004859.d	ENSGT00390000004859.c	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f	ENSGT00950000183014.f.b.b.a.b.b
Channel catfish	MODERN SPECIES	12	TPM4 (ENSIPUG00000006687)	rab8a (ENSIPUG00000006761)	CIB3 (ENSIPUG00000006864)	sugp1 (ENSIPUG00000006883)	mau2 (ENSIPUG00000006952)	GATAD2A (ENSIPUG00000007020)	ndufa13 (ENSIPUG00000007031)	YJEFN3 (ENSIPUG00000007059)	CIRBP (ENSIPUG00000007089)	midn (ENSIPUG00000007122)	ENSIPUG00000007136	stk11 (ENSIPUG00000007147)	ENSIPUG00000007173	ENSIPUG00000007177	PNP (ENSIPUG00000007195)	KCNJ10 (ENSIPUG00000007237) ##22	foxl2b (ENSIPUG00000007251)	nop9 (ENSIPUG00000007265)	TGM1 (ENSIPUG00000007280)	abhd4 (ENSIPUG00000007310)	ENSIPUG00000007352	ENSIPUG00000007402	ENSIPUG00000007442	ENSIPUG00000007465	ENSIPUG00000007490	ENSIPUG00000007510	ENSIPUG00000007532	ENSIPUG00000007542	ENSIPUG00000007569	ENSIPUG00000007599	pigrl3.5 (ENSIPUG00000007605)
Characiphysae_b	ANCESTRAL SPECIES	57	ENSGT00410000028808	ENSGT00720000108823	ENSGT00390000005235	ENSGT00500000045074	ENSGT00390000018395	ENSGT00390000012355.A.b	ENSGT01100000263495.A.a.b.b.a.a.a.b	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000157535.m.b	ENSGT00980000199858	ENSGT00390000014633	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263538.A.a.a.b.a.d	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22	ENSGT00940000162075.a.b	ENSGT00390000004964	ENSGT01050000244939.a.a.b.a.a	ENSGT00390000016277.b	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b	ENSGT00980000199825	ENSGT00950000182977.B.b.a.d.c.a	ENSGT00950000182977.B.b.a.d.c.b
Electric eel	MODERN SPECIES	987															pnp5b (ENSEEEG00000020428)	KCNJ10 (ENSEEEG00000020434) ##22	foxl2b (ENSEEEG00000020447)	ENSEEEG00000020448	TGM1 (ENSEEEG00000020454)	abhd4 (ENSEEEG00000020641)	dad1 (ENSEEEG00000020643)	ENSEEEG00000020648	ENSEEEG00000020650	ENSEEEG00000020651	epc1b (ENSEEEG00000020658)
Characoidei	ANCESTRAL SPECIES	45	ENSGT00410000028808	ENSGT00720000108823	ENSGT00390000005235	ENSGT00500000045074	ENSGT00390000018395	ENSGT00390000012355.A.b	ENSGT01100000263495.A.a.b.b.a.a.a.b	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000157535.m.b	ENSGT00980000199858	ENSGT00390000014633	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263538.A.a.a.b.a.d	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22	ENSGT00940000162075.a.b	ENSGT00390000004964	ENSGT01050000244939.a.a.b.a.a	ENSGT00390000016277.b	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b	ENSGT00980000199825	ENSGT00950000182977.B.b.a.d.c.a	ENSGT00950000182977.B.b.a.d.c.b
Mexicana tetra	MODERN SPECIES	8	ENSAMXG00000013557	ENSAMXG00000041981	ENSAMXG00000035704	si:ch211-155e24.3 (ENSAMXG00000029989)	ENSAMXG00000037677	ENSAMXG00000039910	ENSAMXG00000042743	fcer1gl (ENSAMXG00000032245)	NCSTN (ENSAMXG00000037882)	ENSAMXG00000030697	ENSAMXG00000013492	ENSAMXG00000041969	ENSAMXG00000031676	pnp5b (ENSAMXG00000035060)	ENSAMXG00000038330	KCNJ10 (ENSAMXG00000018055) ##22	foxl2b (ENSAMXG00000018076)	ENSAMXG00000043022	TGM1 (ENSAMXG00000033868)	abhd4 (ENSAMXG00000040865)	dad1 (ENSAMXG00000041545)	ENSAMXG00000034304	ENSAMXG00000037234	ENSAMXG00000014005	ENSAMXG00000039322	ENSAMXG00000044095	ENSAMXG00000033632	LPL (ENSAMXG00000002796)	TPM4 (ENSAMXG00000032280)	RAB8A (ENSAMXG00000002853)	CIB3 (ENSAMXG00000038031)
Red-bellied piranha	MODERN SPECIES	48	ISYNA1 (ENSPNAG00000027668)	ENSPNAG00000027672	ENSPNAG00000027685	ENSPNAG00000027701	ENSPNAG00000027738	ENSPNAG00000027768	ENSPNAG00000027788	si:ch211-155e24.3 (ENSPNAG00000004259)	ENSPNAG00000006215	fcer1gl (ENSPNAG00000027840)	NCSTN (ENSPNAG00000027859)	ENSPNAG00000027916	ENSPNAG00000006154	ENSPNAG00000027942	pnp5b (ENSPNAG00000027947)	KCNJ10 (ENSPNAG00000004298) ##22	foxl2b (ENSPNAG00000028070)	ENSPNAG00000028084	TGM1 (ENSPNAG00000028129)	abhd4 (ENSPNAG00000028146)	dad1 (ENSPNAG00000028161)	ENSPNAG00000006158	ENSPNAG00000028193	ENSPNAG00000028217	ENSPNAG00000028235	ENSPNAG00000028249	ENSPNAG00000006074	ENSPNAG00000028277	ENSPNAG00000028301	ENSPNAG00000005682	ENSPNAG00000028341
Cyprinoidei	ANCESTRAL SPECIES	114	ENSGT00720000108823	ENSGT00390000005235	ENSGT00500000045074	ENSGT00390000018395	ENSGT00390000012355.A.b	ENSGT01030000234576.D.a.a.b.a.a.b.a.a	ENSGT01100000263495.A.a.b.b.a.a.a.b	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.a	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000157535.m.b	ENSGT00980000199858.a	ENSGT00390000014633	ENSGT01100000263538.A.a.a.b.a.d.e	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a ##22	ENSGT00940000162075.a.b	ENSGT00390000004964	ENSGT00940000154799	ENSGT00640000091492.a.c	ENSGT00940000155006.f	ENSGT00940000158052.a.g	ENSGT01030000234767.b.a	ENSGT00640000091492.a.d	ENSGT00940000157047.m.a.a	ENSGT00530000063698.a.b.d	ENSGT00940000155020.u.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	699										ENSGT00390000018395.b	ENSGT00390000012355.A.b	ENSGT01100000263495.A.a.b.b.a.a.a.b.a.b	ENSGT00940000165396.B.t.b	ENSGT00940000157535.m.b.d	ENSGT00950000182991.A.b.a.b	ENSGT00990000203615.b.a.a.a.a.g.a.a.a ##22	ENSGT00940000162075.a.b.d	ENSGT00390000004964	ENSGT00940000154799.q.b	ENSGT00640000091492.a.d.f	ENSGT00940000157047.m.a.a.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	19	sf3a2 (ENSCARG00000007972)	plekhj1 (ENSCARG00000007964)	ISYNA1 (ENSCARG00000007917)	ENSCARG00000007901	ENSCARG00000007894	ENSCARG00000007884	ENSCARG00000007876	ENSCARG00000007868	ENSCARG00000007855	ENSCARG00000007840	ENSCARG00000007831	NCSTN (ENSCARG00000007359)	ENSCARG00000007304	ENSCARG00000007292	pnp5b (ENSCARG00000007281)	KCNJ10 (ENSCARG00000007275) ##22	ENSCARG00000007260	ENSCARG00000007249	vapal (ENSCARG00000007221)	APCDD1 (ENSCARG00000007204)	epb41l3b (ENSCARG00000007110)	ENSCARG00000007076	ENSCARG00000007069	ENSCARG00000007061	ENSCARG00000007057	PTPRM (ENSCARG00000005097)	stk11 (ENSCARG00000004911)	CBARP (ENSCARG00000004889)	ENSCARG00000004875	ENSCARG00000004872	cirbpa (ENSCARG00000004858)
Goldfish	MODERN SPECIES	6	ENSCARG00000007242	MPZL2 (ENSCARG00000007246)	ENSCARG00000007252	ENSCARG00000007264	ENSCARG00000007273	SIK3 (ENSCARG00000007316)	ENSCARG00000007997	SIDT2 (ENSCARG00000008051)	ENSCARG00000008780	ENSCARG00000008783	socs9 (ENSCARG00000008790)	paf1 (ENSCARG00000008815)	SAMD4B (ENSCARG00000009041)	psma6l (ENSCARG00000009158)	otx5 (ENSCARG00000009175)	KCNJ10 (ENSCARG00000009181) ##22	ENSCARG00000009184	PSMD2 (ENSCARG00000009206)	ENSCARG00000009654	fam131ab (ENSCARG00000010546)	ENSCARG00000010557	clcn2b (ENSCARG00000010723)	chdB (ENSCARG00000014282)	ENSCARG00000014320	ENSCARG00000014327	MSANTD4 (ENSCARG00000014334)	aasdhppt (ENSCARG00000014340)	GUCY1A2 (ENSCARG00000014350)	cwf19l2 (ENSCARG00000014362)	ENSCARG00000014417	ENSCARG00000014420
Cyprininae_a	ANCESTRAL SPECIES	59	ENSGT00940000153487.b.a.s.b.a	ENSGT00950000183103.d.b.a.a.j	ENSGT00940000164500.a.a.b	ENSGT00940000164500.a.b	ENSGT00720000108823.l	ENSGT00390000005235.g	ENSGT00390000018395.b	ENSGT00390000012355.A.b	ENSGT01100000263495.A.a.b.b.a.a.a.b.a.b	ENSGT00940000165396.B.t.b	ENSGT00940000157535.m.b.d	ENSGT00980000199858.a	ENSGT00390000014633.a.b	ENSGT01100000263538.A.a.a.b.a.d.e.a	ENSGT00950000182991.A.b.a.b	ENSGT00990000203615.b.a.a.a.a.g.a.a.a ##22	ENSGT00940000162075.a.b.d	ENSGT00390000004964	ENSGT00940000154799.q.b	ENSGT00640000091492.a.d.f	ENSGT00940000157047.m.a.a.b	ENSGT00940000155020.u.b.d	ENSGT00940000158050	ENSGT00510000049027.d.b	ENSGT01090000260029.a.b.b.b.a.a.b.b.a.b.b.b.a.b.a.a.a
Common carp reference	MODERN SPECIES	29	ENSCCRG00000020966	plekhj1 (ENSCCRG00000064151)	sf3a2 (ENSCCRG00000040628)	ENSCCRG00000062737	ENSCCRG00000026464	ENSCCRG00000069403	ENSCCRG00000082820	ENSCCRG00000071475	fcer1gl (ENSCCRG00000040516)	ENSCCRG00000034048	ENSCCRG00000082382	ENSCCRG00000072399	ENSCCRG00000059281	ENSCCRG00000060441	pnp5b (ENSCCRG00000063003)	ENSCCRG00000033962 ##22	foxl2b (ENSCCRG00000055086)	ENSCCRG00000012247	ENSCCRG00000075565	vapal (ENSCCRG00000005246)	ENSCCRG00000082718	epb41l3b (ENSCCRG00000005264)	ENSCCRG00000064811	ENSCCRG00000035358	ENSCCRG00000063644	ENSCCRG00000056413	ENSCCRG00000072730	ENSCCRG00000051541	ENSCCRG00000081706	ENSCCRG00000067913	ENSCCRG00000069672
Cyprininae	ANCESTRAL SPECIES	366	ENSGT00940000164500.a.a.a	ENSGT00720000108823.k.a	ENSGT00390000005235	ENSGT00500000045074	ENSGT00390000018395.a	ENSGT01100000263495.A.a.b.b.a.a.a.b.a.a	ENSGT00940000165396.B.t.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000165396.B.s	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000157535.m.b.c	ENSGT00980000199858.a	ENSGT00390000014633.a.a	ENSGT01100000263538.A.a.a.b.a.d.e	ENSGT00950000182991.A.b.a.a	ENSGT00990000203615.b.a.a.a.a.g.a.a.b ##22	ENSGT00940000162075.a.b.c	ENSGT00940000154799.q.a	ENSGT00640000091492.a.d.e	ENSGT00940000157047.m.a.a.a	ENSGT00530000063698.a.b.d	ENSGT00940000155020.u.b.c
Cyprininae_a	ANCESTRAL SPECIES	347	ENSGT00940000164500.a.a.a	ENSGT00720000108823.k.a	ENSGT00390000005235.h	ENSGT00500000045074	ENSGT00390000018395.a	ENSGT01100000263495.A.a.b.b.a.a.a.b.a.a	ENSGT00940000165396.B.t.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000165396.B.s	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000157535.m.b.c	ENSGT00980000199858.b	ENSGT00390000014633.a.a	ENSGT01100000263538.A.a.a.b.a.d.e.b	ENSGT00950000182991.A.b.a.a	ENSGT00990000203615.b.a.a.a.a.g.a.a.b ##22	ENSGT00940000162075.a.b.c	ENSGT00940000154799.q.a	ENSGT00640000091492.a.d.e	ENSGT00940000157047.m.a.a.a	ENSGT00530000063698.a.b.d	ENSGT00940000155020.u.b.c
Common carp reference	MODERN SPECIES	21	pias4b (ENSCCRG00000020596)	ENSCCRG00000029100	ENSCCRG00000063966	ENSCCRG00000064800	sf3a2 (ENSCCRG00000070094)	plekhj1 (ENSCCRG00000040625)	tpgs1 (ENSCCRG00000062131)	ENSCCRG00000040609	ENSCCRG00000069822	ENSCCRG00000040566	si:ch211-155e24.3 (ENSCCRG00000066415)	ENSCCRG00000042353	ENSCCRG00000054097	ENSCCRG00000058515	pnp5b (ENSCCRG00000065090)	ENSCCRG00000062639 ##22	foxl2b (ENSCCRG00000060357)	vapal (ENSCCRG00000003536)	ENSCCRG00000002708	epb41l3b (ENSCCRG00000054187)	ENSCCRG00000068972	ENSCCRG00000081571	ENSCCRG00000056436	ENSCCRG00000081779	ENSCCRG00000059936	ENSCCRG00000078780	ENSCCRG00000071613	ENSCCRG00000081485	ENSCCRG00000055222	ENSCCRG00000033301	ENSCCRG00000078008
Zebrafish	MODERN SPECIES	11	ENSDARG00000067815	ENSDARG00000095024	sf3a2 (ENSDARG00000021107)	plekhj1 (ENSDARG00000025593)	tpgs1 (ENSDARG00000027547)	ENSDARG00000038476	ENSDARG00000092766	ENSDARG00000079930	ENSDARG00000074846	si:ch211-155e24.3 (ENSDARG00000105127)	ENSDARG00000103148	fcer1gl (ENSDARG00000104077)	ENSDARG00000103284	ENSDARG00000100199	pnp5b (ENSDARG00000099802)	KCNJ10 (ENSDARG00000105022) ##22	foxl2b (ENSDARG00000068417)	ENSDARG00000078442	vapal (ENSDARG00000115862)	ENSDARG00000115672	APCDD1 (ENSDARG00000098203)	epb41l3b (ENSDARG00000019917)	ENSDARG00000116727	ENSDARG00000067817	PTPRS (ENSDARG00000110940)	cirbpa (ENSDARG00000103672)	ENSDARG00000090544	MAU2 (ENSDARG00000042056)	ENSDARG00000075936	ENSDARG00000089172	stk11 (ENSDARG00000046074)
Clupeiformes	DUPLICATION
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	888															ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.g.a.a.c.a ##22
Atlantic herring	MODERN SPECIES	17	ENSCHAG00000013150	ENSCHAG00000013157	PLPP2 (ENSCHAG00000002687)	theg (ENSCHAG00000002760)	ENSCHAG00000002786	ENSCHAG00000002821	ENSCHAG00000002929	ENSCHAG00000002947	ENSCHAG00000003033	ENSCHAG00000003059	shda (ENSCHAG00000003089)	ENSCHAG00000003125	ENSCHAG00000003192	pnp5b (ENSCHAG00000003233)	EIF4E1B (ENSCHAG00000003377)	KCNJ10 (ENSCHAG00000003393) ##22	ENSCHAG00000003468	ENSCHAG00000003489	ENSCHAG00000003518	ENSCHAG00000003544	ENSCHAG00000003559	ENSCHAG00000003584	ENSCHAG00000003596	ENSCHAG00000003603	ENSCHAG00000003644	ENSCHAG00000003655	ENSCHAG00000003667	ENSCHAG00000003699	HCN2 (ENSCHAG00000003730)	rnf126 (ENSCHAG00000003947)	SUGP1 (ENSCHAG00000003995)
Denticle herring	MODERN SPECIES	14	ENSDCDG00000034219	ENSDCDG00000034215	ENSDCDG00000034206	ENSDCDG00000034202	ENSDCDG00000034200	cdc34b (ENSDCDG00000034198)	gna11b (ENSDCDG00000034196)	tle5 (ENSDCDG00000034194)	tle2c (ENSDCDG00000034192)	PLPP2 (ENSDCDG00000034189)	ENSDCDG00000034187	shda (ENSDCDG00000034184)	yju2 (ENSDCDG00000034182)	ENSDCDG00000034177	ENSDCDG00000034050	KCNJ10 (ENSDCDG00000034043) ##22	ENSDCDG00000034041	ENSDCDG00000034039	ENSDCDG00000034037	ENSDCDG00000034036	ENSDCDG00000034033	kirrel1b (ENSDCDG00000034013)	cadm3 (ENSDCDG00000033919)	sdhc (ENSDCDG00000033909)	atp1a2a (ENSDCDG00000032318)	mpz (ENSDCDG00000032267)	ENSDCDG00000031940	zgc:152670 (ENSDCDG00000031918)	ENSDCDG00000031914	PIP4P1 (ENSDCDG00000031912)	dnaaf6 (ENSDCDG00000031907)
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a.c.b ##22
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	121														cxcl19 (ENSDCDG00000029023)	ENSDCDG00000029020	KCNJ10 (ENSDCDG00000029018) ##22	ENSDCDG00000029009	ENSDCDG00000029007	ENSDCDG00000029004	ENSDCDG00000029002
Denticle herring	MODERN SPECIES		ENSDCDG00000000161	ENSDCDG00000000386	ENSDCDG00000000608	sgms2b (ENSDCDG00000000613)	ENSDCDG00000000617	ENSDCDG00000000622	zgc:172075 (ENSDCDG00000000628)	ENSDCDG00000000631	ENSDCDG00000000636	ENSDCDG00000000640	ENSDCDG00000000644	ENSDCDG00000000648	ENSDCDG00000000653	cxcl19 (ENSDCDG00000000658)	ENSDCDG00000000663	KCNJ10 (ENSDCDG00000000671) ##22	ENSDCDG00000000678	ENSDCDG00000000683	DLG4 (ENSDCDG00000000719)
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.a.d ##22
Atlantic herring	MODERN SPECIES	9	rbm14b (ENSCHAG00000015737)	ccs (ENSCHAG00000015754)	prkd4 (ENSCHAG00000015775)	ENSCHAG00000015807	ENSCHAG00000015973	sf3b2 (ENSCHAG00000016005)	ENSCHAG00000017184	capn1 (ENSCHAG00000017230)	ENSCHAG00000018225	pnp5a (ENSCHAG00000018274)	ENSCHAG00000018348	pnp5a (ENSCHAG00000018385)	ENSCHAG00000018416	ENSCHAG00000018449	ENSCHAG00000018482	KCNJ10 (ENSCHAG00000018490) ##22	ENSCHAG00000018510	ENSCHAG00000018523	ENSCHAG00000018530	ENSCHAG00000018543	ENSCHAG00000018551	ENSCHAG00000018580	ENSCHAG00000018588	ENSCHAG00000018610	ENSCHAG00000018636	ENSCHAG00000018675	ENSCHAG00000018701	ENSCHAG00000018765	ENSCHAG00000018792	ENSCHAG00000018799	ENSCHAG00000018846
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22
Otomorpha	ANCESTRAL SPECIES	13	ENSGT00950000182923.A	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT00940000153968.a.b.b.b	ENSGT00940000157436.a	ENSGT00940000159785	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00940000156472.c	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22	ENSGT01030000235097	ENSGT01030000234994	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.f.a.a	ENSGT00950000182966.C.b.b	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT01100000263473.a.b.h.b	ENSGT01100000263473.b.a.a.a	ENSGT00940000159208.B	ENSGT00940000154807.a.a	ENSGT00940000154896.l	ENSGT00940000158906.i
Otophysi	ANCESTRAL SPECIES	9	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000153968.a.b.b.b	ENSGT00940000157436.a	ENSGT00940000159785	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a.j	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00940000156472.c	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22	ENSGT01030000235097	ENSGT01030000234994	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.f.a.a	ENSGT00950000182966.C.b.b	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT01100000263473.a.b.h.b	ENSGT01100000263473.b.a.a.a.b	ENSGT01100000263473.a.b.g.a.a.b.b.a.b.b	ENSGT00940000155044.A.d	ENSGT00940000164143.a.a	ENSGT00950000183116.b.a.a.b.b
Characiphysae	ANCESTRAL SPECIES	45	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000153968.a.b.b.b	ENSGT00940000157436.a	ENSGT00940000159785	ENSGT00990000210819	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a.j	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00940000156472.c	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22
Channel catfish	MODERN SPECIES	26	sf3b2 (ENSIPUG00000009383)	ENSIPUG00000009402	ENSIPUG00000009417	ENSIPUG00000009429	ENSIPUG00000009440	ENSIPUG00000009467	ENSIPUG00000009474	ENSIPUG00000009496	ENSIPUG00000009559	ENSIPUG00000009727	ENSIPUG00000009781	ENSIPUG00000009876	ENSIPUG00000009893	capn1 (ENSIPUG00000009909)	pnp5a (ENSIPUG00000010116)	kcnj10 (ENSIPUG00000010159) ##22	ENSIPUG00000010182	ENSIPUG00000010204	ENSIPUG00000010209	ENSIPUG00000010226	ENSIPUG00000010238	ENSIPUG00000010260	ENSIPUG00000010276	ENSIPUG00000010301	ENSIPUG00000010458	ENSIPUG00000010478	ENSIPUG00000010487	ENSIPUG00000010502	ENSIPUG00000010511	ENSIPUG00000010515	vangl2 (ENSIPUG00000010524)
Characiphysae_b	ANCESTRAL SPECIES	59	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000153968.a.b.b.b	ENSGT00940000157436.a	ENSGT00940000159785	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a.j	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00940000156472.c	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22
Characoidei	ANCESTRAL SPECIES	153	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000153968.a.b.b.b	ENSGT00940000157436.a	ENSGT00940000159785	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a.j	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00940000156472.c	ENSGT01090000260030.a.a.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b	ENSGT01030000235604.b.b
Mexicana tetra	MODERN SPECIES	7	GAL3ST3 (ENSAMXG00000029950)	actn3b (ENSAMXG00000021492)	rbm14b (ENSAMXG00000031225)	ccs (ENSAMXG00000004945)	prkd4 (ENSAMXG00000004948)	ENSAMXG00000038894	ENSAMXG00000036654	PACS1 (ENSAMXG00000007895)	ENSAMXG00000043563	sf3b2 (ENSAMXG00000007929)	capn1 (ENSAMXG00000007948)	dusp19b (ENSAMXG00000007960)	ENSAMXG00000007973	pnp5a (ENSAMXG00000007985)	ENSAMXG00000042574	KCNJ10 (ENSAMXG00000039870) ##22	ENSAMXG00000036409	ENSAMXG00000036277	ENSAMXG00000039272	ENSAMXG00000008032	ENSAMXG00000043992	EFCAB14 (ENSAMXG00000041820)	ZNF830 (ENSAMXG00000032927)	ENSAMXG00000008607	ENSAMXG00000008655	rpe65a (ENSAMXG00000008745)	RNF11 (ENSAMXG00000036992)	ENSAMXG00000008928	ABCF3 (ENSAMXG00000008937)	polr2d (ENSAMXG00000008954)	ENSAMXG00000033815
Red-bellied piranha	MODERN SPECIES	345	zgc:101810 (ENSPNAG00000011976)	ENSPNAG00000005870	GAL3ST3 (ENSPNAG00000002008)	actn3b (ENSPNAG00000011909)	rbm14b (ENSPNAG00000001977)	ccs (ENSPNAG00000001972)	prkd4 (ENSPNAG00000011849)	ENSPNAG00000001947	PACS1 (ENSPNAG00000011787)	sf3b2 (ENSPNAG00000001891)	capn1 (ENSPNAG00000011699)	ENSPNAG00000011685	dusp19b (ENSPNAG00000001865)	ENSPNAG00000011660	pnp5a (ENSPNAG00000011640)	KCNJ10 (ENSPNAG00000001834) ##22	ENSPNAG00000001824	ENSPNAG00000001812	ENSPNAG00000011532	ENSPNAG00000011514	ENSPNAG00000001762	ENSPNAG00000001759	ENSPNAG00000011451	ENSPNAG00000001735	ENSPNAG00000001727
Electric eel	MODERN SPECIES	423	b4gat1 (ENSEEEG00000015755)	six7 (ENSEEEG00000015754)	zgc:101810 (ENSEEEG00000015748)	ENSEEEG00000015745	GAL3ST3 (ENSEEEG00000015742)	actn3b (ENSEEEG00000013785)	rbm14b (ENSEEEG00000013703)	ccs (ENSEEEG00000013693)	prkd4 (ENSEEEG00000013692)	ENSEEEG00000013682	ENSEEEG00000013681	sf3b2 (ENSEEEG00000013571)	capn1 (ENSEEEG00000013161)	dusp19b (ENSEEEG00000013146)	pnp5a (ENSEEEG00000013141)	KCNJ10 (ENSEEEG00000013138) ##22
Cyprinoidei	ANCESTRAL SPECIES	191														ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.a.b ##22	ENSGT00940000166094	ENSGT00940000162700.f	ENSGT00950000183089.c.a.m.a.b	ENSGT01100000263559.B	ENSGT01060000248528.b.n	ENSGT01100000263474.a.b.a.b.a.d	ENSGT00950000183089.c.a.m.a.a	ENSGT01100000263559.A.db	ENSGT01060000248528.b.m.b	ENSGT01020000230360.c.b.a.a.a.a.a.d.i	ENSGT00940000156472.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	405	ENSGT00940000157679.g	ENSGT00940000165710.b	ENSGT00940000165968.a	ENSGT00940000165459.a.a.a.b	ENSGT00950000182923.A.ab.a	ENSGT00940000153968.a.b.b.b.j.a	ENSGT00940000157436.a.a	ENSGT00950000183024.a.a.a.h	ENSGT00940000166677.b	ENSGT00950000183209.a.j.h.b	ENSGT00390000006734.a.b	ENSGT00940000159147.b.b.i	ENSGT00950000182991.A.b.b.s	ENSGT00940000156472.c.e.a	ENSGT00950000182991.A.b.b.r.a.a.a	ENSGT00990000203615.b.a.a.a.a.g.a.b.a ##22
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	47	pfdn2 (ENSCARG00000001666)	b4gat1 (ENSCARG00000001664)	six7 (ENSCARG00000001660)	ENSCARG00000001657	GAL3ST3 (ENSCARG00000001652)	actn3b (ENSCARG00000001178)	rbm14b (ENSCARG00000001102)	prkd4 (ENSCARG00000001079)	ENSCARG00000001043	PACS1 (ENSCARG00000000961)	sf3b2 (ENSCARG00000000880)	capn1 (ENSCARG00000000738)	dusp19b (ENSCARG00000000703)	ENSCARG00000000692	pnp5a (ENSCARG00000000667)	KCNJ10 (ENSCARG00000000657) ##22	ENSCARG00000000648	ENSCARG00000000634	nelfa (ENSCARG00000000601)	faah2b (ENSCARG00000000573)	btr09 (ENSCARG00000000561)	TESK1 (ENSCARG00000000555)	pik3c3 (ENSCARG00000000443)	MSMP (ENSCARG00000000363)	rgp1 (ENSCARG00000000352)	GBA2 (ENSCARG00000000302)	calb2b (ENSCARG00000000217)	cmtr2 (ENSCARG00000029123)	ENSCARG00000029110	otub1b (ENSCARG00000029053)	cskmt (ENSCARG00000029009)
Goldfish	MODERN SPECIES	47	nitr5 (ENSCARG00000001658)	nitr5 (ENSCARG00000001654)	ENSCARG00000001648	ENSCARG00000001645	ENSCARG00000001641	ENSCARG00000001635	ENSCARG00000001633	ENSCARG00000001630	nitr3a (ENSCARG00000001611)	nitr8 (ENSCARG00000001601)	sf3b2 (ENSCARG00000001328)	capn1 (ENSCARG00000001183)	dusp19b (ENSCARG00000001167)	ENSCARG00000001164	pnp5a (ENSCARG00000001162)	KCNJ10 (ENSCARG00000001159) ##22	ENSCARG00000001151	ENSCARG00000001147	ENSCARG00000001146	ENSCARG00000001143	ENSCARG00000001141	ENSCARG00000001135	ENSCARG00000001127	ENSCARG00000001123	ENSCARG00000001115	slc12a10.3 (ENSCARG00000001087)	slc12a10.3 (ENSCARG00000001046)	cbln11 (ENSCARG00000001032)	ENSCARG00000001026	ENSCARG00000001020	ENSCARG00000001016
Cyprininae_a	ANCESTRAL SPECIES	229	ENSGT00940000157679.h	ENSGT00940000165710.a.a.a	ENSGT00940000165968.a	ENSGT00940000165459.a.a.a.b	ENSGT00950000182923.A.ab.a	ENSGT00940000153968.a.b.b.b.j.a	ENSGT00940000157436.a.a	ENSGT00950000183024.a.a.a.h	ENSGT00940000166677.b	ENSGT00950000183209.a.j.h.b	ENSGT00390000006734.a.b	ENSGT00940000159147.b.b.i	ENSGT00950000182991.A.b.b.s	ENSGT00940000156472.c.e.a	ENSGT00950000182991.A.b.b.r.a.a.a	ENSGT00990000203615.b.a.a.a.a.g.a.b.a ##22
Golden-line barbel	MODERN SPECIES	1496													sf3b2 (ENSSGRG00000014906)	capn1 (ENSSGRG00000014909)	ENSSGRG00000015558	KCNJ10 (ENSSGRG00000015559) ##22	ENSSGRG00000015560	ENSSGRG00000015562	ENSSGRG00000015563
Common carp reference	MODERN SPECIES		AADAT (ENSCCRG00000059925)	mfap3l (ENSCCRG00000069492)	CLCN3 (ENSCCRG00000027200)	b4gat1 (ENSCCRG00000027190)	zgc:101810 (ENSCCRG00000048389)	ENSCCRG00000082846	actn3b (ENSCCRG00000047390)	rbm14b (ENSCCRG00000047280)	prkd4 (ENSCCRG00000047278)	ENSCCRG00000075328	ENSCCRG00000060679	sf3b2 (ENSCCRG00000034663)	capn1 (ENSCCRG00000005160)	ENSCCRG00000056358	pnp5a (ENSCCRG00000061402)	ENSCCRG00000015316 ##22	ENSCCRG00000064436	ENSCCRG00000066987	ENSCCRG00000078728	ENSCCRG00000079165	ENSCCRG00000015735	ENSCCRG00000052853	ENSCCRG00000080209	ENSCCRG00000036718	ENSCCRG00000061125	ENSCCRG00000052857	ENSCCRG00000059935	ENSCCRG00000062915	ENSCCRG00000042282	ENSCCRG00000080118	ENSCCRG00000071115
Cyprininae	ANCESTRAL SPECIES	550	ENSGT00940000165710.a.b	ENSGT00940000165968.b	ENSGT00940000165459.a.a.a.a.b	ENSGT00950000182923.A.ab.b	ENSGT00940000153968.a.b.b.b.j.b	ENSGT00940000157436.a.b	ENSGT00940000159785	ENSGT00990000210819	ENSGT00950000183024.a.a.a.g	ENSGT00940000166677.a	ENSGT00950000183209.a.j.h.a	ENSGT00390000006734.a.a	ENSGT00940000159147.b.b.j	ENSGT00940000156472.c.e.b	ENSGT00950000182991.A.b.b.r.b	ENSGT00990000203615.b.a.a.a.a.g.a.b.b ##22	ENSGT00940000166094	ENSGT00940000162700.f.d.b.b	ENSGT00950000183089.c.a.m.a.b.a.a
Goldfish	MODERN SPECIES	230	six7 (ENSCARG00000027887)	zgc:101810 (ENSCARG00000027897)	ENSCARG00000027919	GAL3ST3 (ENSCARG00000027940)	actn3b (ENSCARG00000027969)	rbm14b (ENSCARG00000028271)	CCS (ENSCARG00000028294)	prkd4 (ENSCARG00000028317)	ENSCARG00000028379	ENSCARG00000028394	PACS1 (ENSCARG00000028515)	sf3b2 (ENSCARG00000029356)	capn1 (ENSCARG00000029890)	dusp19b (ENSCARG00000030422)	pnp5a (ENSCARG00000030434)	KCNJ10 (ENSCARG00000057256) ##22	ENSCARG00000057286	zgc:110425 (ENSCARG00000057335)	ENSCARG00000057370	ENSCARG00000057396	ENSCARG00000057444	ENSCARG00000057458	ENSCARG00000057491	ENSCARG00000057501	ENSCARG00000057510	ENSCARG00000057533	ENSCARG00000057537	ENSCARG00000057554	vangl2 (ENSCARG00000057567)	ENSCARG00000057612	MYADM (ENSCARG00000057899)
Cyprininae_a	ANCESTRAL SPECIES	287	ENSGT00550000075099	ENSGT00390000009272.ab.b	ENSGT00940000157679.g	ENSGT00940000165710.b	ENSGT00940000165968.b	ENSGT00940000165459.a.a.a.a.b	ENSGT00950000182923.A.ab.b	ENSGT00940000153968.a.b.b.b.j.b	ENSGT00940000157436.a.b	ENSGT00950000183024.a.a.a.g	ENSGT00940000166677.a	ENSGT00950000183209.a.j.h.a	ENSGT00390000006734.a.a	ENSGT00940000156472.c.f	ENSGT00950000182991.A.b.b.r.a.b	ENSGT00990000203615.b.a.a.a.a.g.a.b.b ##22	ENSGT00940000166094	ENSGT00940000162700.f.d.b.b	ENSGT00950000183089.c.a.m.a.b.a.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	2896																KCNJ10 (ENSSGRG00000004226) ##22
Golden-line barbel	MODERN SPECIES	1358											ENSSGRG00000012044	PACS1 (ENSSGRG00000012042)	sf3b2 (ENSSGRG00000012039)	dusp19b (ENSSGRG00000012037)	pnp5a (ENSSGRG00000012007)	KCNJ10 (ENSSGRG00000012006) ##22	zgc:110425 (ENSSGRG00000012004)	ENSSGRG00000011985	ENSSGRG00000011982	ENSSGRG00000011981	ENSSGRG00000011968	ENSSGRG00000011958	ENSSGRG00000011955	ENSSGRG00000011943	ENSSGRG00000011942
Common carp reference	MODERN SPECIES	6	nit1 (ENSCCRG00000032023)	pfdn2 (ENSCCRG00000074233)	b4gat1 (ENSCCRG00000032012)	six7 (ENSCCRG00000056555)	zgc:101810 (ENSCCRG00000080188)	ENSCCRG00000079158	actn3b (ENSCCRG00000055221)	ENSCCRG00000081983	rbm14b (ENSCCRG00000081232)	prkd4 (ENSCCRG00000029898)	ENSCCRG00000029905	ENSCCRG00000033377	sf3b2 (ENSCCRG00000047391)	ENSCCRG00000069133	pnp5a (ENSCCRG00000068442)	ENSCCRG00000056250 ##22	ENSCCRG00000078463	ENSCCRG00000007795	zgc:110425 (ENSCCRG00000067301)	ENSCCRG00000052910	ENSCCRG00000015314	ENSCCRG00000039075	ENSCCRG00000066013	ENSCCRG00000008867	ENSCCRG00000039049	ENSCCRG00000039037	ENSCCRG00000055951	ENSCCRG00000057050	ENSCCRG00000079141	ENSCCRG00000059945	ENSCCRG00000063714
Zebrafish	MODERN SPECIES	22	ENSDARG00000111661	b4gat1 (ENSDARG00000077583)	six7 (ENSDARG00000070107)	zgc:101810 (ENSDARG00000004658)	ENSDARG00000070100	GAL3ST3 (ENSDARG00000073728)	ccs (ENSDARG00000092003)	actn3b (ENSDARG00000001431)	rbm14b (ENSDARG00000103834)	CCS (ENSDARG00000116246)	ENSDARG00000113916	prkd4 (ENSDARG00000104153)	sf3b2 (ENSDARG00000018049)	capn1 (ENSDARG00000045199)	pnp5a (ENSDARG00000078619)	KCNJ10 (ENSDARG00000090815) ##22	ENSDARG00000105438	ENSDARG00000074818	zgc:110425 (ENSDARG00000058479)	ENSDARG00000105444	ENSDARG00000105359	zgc:112234 (ENSDARG00000105507)	hist1h2a2 (ENSDARG00000103015)	ENSDARG00000105409	zgc:112234 (ENSDARG00000105393)	zgc:154164 (ENSDARG00000105355)	ENSDARG00000074012	ENSDARG00000098595	ENSDARG00000105484	zgc:112234 (ENSDARG00000105483)	ENSDARG00000105366
Clupeocephala	ANCESTRAL SPECIES	56	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000168521	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000234994	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a	ENSGT00950000182966.C.b.b	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT00940000154311.a.a.a.b	ENSGT00940000164143.a.a	ENSGT00950000183116.b.a.a.b.b	ENSGT00940000164143.a.b	ENSGT00940000177672
Euteleosteomorpha	ANCESTRAL SPECIES	28	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000234994	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a	ENSGT00950000182966.C.b.b	ENSGT01050000246201	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT00940000154311.a.a.a.b	ENSGT00940000163520.A.a.a.a.a.a.b	ENSGT00940000164143.a.a	ENSGT00950000183116.b.a.a.b.b
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968.c.a	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b.o	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a.a.b	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b	ENSGT00940000162700.e.a.a.a.b.b.b.b	ENSGT00500000044904.a.b.g.b	ENSGT00940000163711.a	ENSGT01000000215856.a	ENSGT00940000162700.e.a.a.a.a.a	ENSGT01030000234540.C.j	ENSGT01030000234540.C.i	ENSGT01030000234994	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.l.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	569			ENSGT01030000234540.C.i.a.a.a.a	ENSGT01100000263489.a.a.b.b.f.c.a.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT00940000161979.A.a.b	ENSGT00940000177672	ENSGT00940000164143.a.b.m	ENSGT00950000182966.C.a.o	ENSGT00950000182966.C.b.b.c	ENSGT00950000183024.a.a.a.e	ENSGT00940000166677.c	ENSGT00950000183209.a.a.b.d.a	ENSGT00390000006734.a.c	ENSGT00940000159147.b.b.e	ENSGT00950000182991.A.b.b.b.a	ENSGT00990000203615.b.a.a.a.a.g.b.a.a ##22	ENSGT01050000244808.D.d	ENSGT00940000163711.a.f	ENSGT01000000215856.b.a
Huchen	MODERN SPECIES	526	ENSHHUG00000039890	ENSHHUG00000039894	ENSHHUG00000039902	ENSHHUG00000039908	ENSHHUG00000039914	ENSHHUG00000039917	ENSHHUG00000039920	ltb4r (ENSHHUG00000039936)	ENSHHUG00000039940	prkd4 (ENSHHUG00000039949)	ENSHHUG00000039970	PACS1 (ENSHHUG00000040019)	sf3b2 (ENSHHUG00000040049)	capn1 (ENSHHUG00000040091)	pnp5a (ENSHHUG00000040365)	KCNJ10 (ENSHHUG00000040370) ##22	ENSHHUG00000040372	ENSHHUG00000040383	ENSHHUG00000040393
Salmoninae_a	ANCESTRAL SPECIES	20	ENSGT01100000263489.a.a.b.b.f.c.a.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.a.a	ENSGT00940000177672	ENSGT00940000164143.a.b.m	ENSGT00950000183116.b.a.a.b.b	ENSGT00950000182966.C.a.p.b	ENSGT00950000182966.C.a.o	ENSGT00950000182966.C.b.b.c	ENSGT00950000183024.a.a.a.e	ENSGT00940000166677.c	ENSGT00950000183209.a.a.b.d.a	ENSGT00390000006734.a.c	ENSGT00940000159147.b.b.e	ENSGT00950000182991.A.b.b.b.a	ENSGT01030000234599.a.b.c.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.a ##22	ENSGT01050000244808.D.d	ENSGT00940000163711.a.f	ENSGT00940000156907.p.b.b.c.b	ENSGT00950000182872.f.b.b.r	ENSGT01030000234599.a.b.d.b.a.b	ENSGT01030000234599.a.b.d.a.b.a	ENSGT00510000051759.b	ENSGT00940000165312.h	ENSGT00940000166741	ENSGT00940000156397.a.b.a	ENSGT01010000223553.a	ENSGT00940000167415.c	ENSGT01040000240385.A.a.a.a.b	ENSGT01040000240385.A.a.b.b.e.b	ENSGT01040000240400.c.b.b.b.b
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT01030000234540.C.i.a.b	ENSGT01100000263489.a.a.b.b.f.c.a.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.a.a	ENSGT00940000164143.a.b.m	ENSGT00950000183116.b.a.a.b.b	ENSGT00950000182966.C.a.p.b	ENSGT00950000182966.C.a.o	ENSGT00950000182966.C.b.b.c	ENSGT00950000183024.a.a.a.e	ENSGT00940000166677.c	ENSGT00950000183209.a.a.b.d.a	ENSGT00390000006734.a.c	ENSGT00940000159147.b.b.e	ENSGT00950000182991.A.b.b.b.a	ENSGT01030000234599.a.b.c.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.a ##22	ENSGT01050000244808.D.d	ENSGT00940000163711.a.f	ENSGT00940000156907.p.b.b.d	ENSGT00950000182872.f.b.b.r	ENSGT01030000234599.a.b.d.b.a.b	ENSGT01030000234599.a.b.d.a.b.a	ENSGT00510000051759.b	ENSGT00940000165312.h	ENSGT01030000234599.a.b.c.b.a.b	ENSGT00940000166741	ENSGT00940000156397.a.b.a	ENSGT01010000223553.a	ENSGT00940000167415.c	ENSGT01040000240385.A.a.b.b.e.b	ENSGT01040000240400.c.b.b.b.b
Rainbow trout	MODERN SPECIES	13	zg57 (ENSOMYG00000024322)	ENSOMYG00000075593	ENSOMYG00000073043	ENSOMYG00000024294	ENSOMYG00000024281	ENSOMYG00000057680	ENSOMYG00000024275	ENSOMYG00000024247	ENSOMYG00000024236	prkd4 (ENSOMYG00000024218)	ENSOMYG00000024166	ENSOMYG00000024101	sf3b2 (ENSOMYG00000023346)	capn1 (ENSOMYG00000018375)	pnp5a (ENSOMYG00000018118)	ENSOMYG00000018095 ##22	ENSOMYG00000018092	ENSOMYG00000053993	ENSOMYG00000024534	ENSOMYG00000053308	ENSOMYG00000061775	ENSOMYG00000018069	ENSOMYG00000018027	ENSOMYG00000017964	ENSOMYG00000017928	ENSOMYG00000061648	ENSOMYG00000017845	ENSOMYG00000054277	znf219 (ENSOMYG00000017788)	ENSOMYG00000017776	btr12 (ENSOMYG00000017751)
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT01030000234540.C.i.a.a.b.b	ENSGT01100000263489.a.a.b.b.f.c.a.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.a.a	ENSGT00940000164143.a.b.m	ENSGT00950000183116.b.a.a.b.b	ENSGT00950000182966.C.a.p.b	ENSGT00950000182966.C.a.o	ENSGT00950000182966.C.b.b.c	ENSGT00950000183024.a.a.a.e	ENSGT00940000166677.c	ENSGT00950000183209.a.a.b.d.a	ENSGT00390000006734.a.c	ENSGT00940000159147.b.b.e	ENSGT00950000182991.A.b.b.b.a	ENSGT01030000234599.a.b.c.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.a ##22	ENSGT01050000244808.D.d	ENSGT00940000163711.a.f	ENSGT00940000156907.p.b.b.d	ENSGT00950000182872.f.b.b.r	ENSGT01030000234599.a.b.d.b.a.b	ENSGT01030000234599.a.b.d.a.b.a	ENSGT00510000051759.b	ENSGT00940000165312.h	ENSGT01030000234599.a.b.c.b.a.b	ENSGT00940000166741	ENSGT00940000156397.a.b.a	ENSGT00940000167415.c	ENSGT01040000240385.A.a.b.b.e.b	ENSGT01040000240400.c.b.b.b.b	ENSGT01040000240400.c.b.b.a.a.a
Chinook salmon	MODERN SPECIES	6	GAL3ST3 (ENSOTSG00005046181)	CCS (ENSOTSG00005046179)	rbm14b (ENSOTSG00005046177)	actn3a (ENSOTSG00005045054)	MYADM (ENSOTSG00005045052)	ENSOTSG00005044873	vangl2 (ENSOTSG00005044870)	ENSOTSG00005044868	ENSOTSG00005044864	ENSOTSG00005044862	ENSOTSG00005044861	sf3b2 (ENSOTSG00005044604)	capn1 (ENSOTSG00005044201)	pnp5a (ENSOTSG00005044198)	ENSOTSG00005044197	KCNJ10 (ENSOTSG00005044196) ##22	ENSOTSG00005044195	ENSOTSG00005044194	ENSOTSG00005044193	ENSOTSG00005044192	ENSOTSG00005044191	ndrg2 (ENSOTSG00005044190)	ENSOTSG00005044186	ENSOTSG00005044185	ENSOTSG00005044184	ENSOTSG00005044183	ENSOTSG00005044182	ENSOTSG00005044181	znf219 (ENSOTSG00005044179)	btr12 (ENSOTSG00005044178)	ENSOTSG00005044176
Coho salmon	MODERN SPECIES	29	ENSOKIG00005006847	ENSOKIG00005006835	ENSOKIG00005006827	ENSOKIG00005006821	ENSOKIG00005006814	ENSOKIG00005006800	ENSOKIG00005006797	ENSOKIG00005006790	prkd4 (ENSOKIG00005006772)	ENSOKIG00005006641	PACS1 (ENSOKIG00005006435)	sf3b2 (ENSOKIG00005005460)	capn1 (ENSOKIG00005004995)	pnp5a (ENSOKIG00005004927)	ENSOKIG00005004917	KCNJ10 (ENSOKIG00005004908) ##22	ENSOKIG00005004893	ENSOKIG00005004885	ENSOKIG00005004878	ENSOKIG00005004870	ENSOKIG00005004862	ndrg2 (ENSOKIG00005004845)	ENSOKIG00005004814	ENSOKIG00005004781	ENSOKIG00005004760	ENSOKIG00005004746	znf219 (ENSOKIG00005004736)	ENSOKIG00005004717	ENSOKIG00005004712	btr12 (ENSOKIG00005004682)	ENSOKIG00005004667
Salmo	ANCESTRAL SPECIES	25	ENSGT01100000263489.a.a.b.b.f.c.a.a.b.b.a.b.a.a.a.a.a.b.a.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.a.a	ENSGT00940000177672	ENSGT00940000164143.a.b.m	ENSGT00950000183116.b.a.a.b.b	ENSGT00950000182966.C.a.p.b	ENSGT00950000182966.C.a.o	ENSGT00950000182966.C.b.b.c	ENSGT00950000183024.a.a.a.e	ENSGT00940000166677.c	ENSGT00950000183209.a.a.b.d.a	ENSGT00390000006734.a.c	ENSGT00940000159147.b.b.e	ENSGT00950000182991.A.b.b.b.a	ENSGT01030000234599.a.b.c.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.a ##22	ENSGT00940000156907.p.b.b.c.b	ENSGT00950000182872.f.b.b.r	ENSGT01030000234599.a.b.d.b.a.b	ENSGT01030000234599.a.b.d.a.b.a	ENSGT00510000051759.b	ENSGT00940000158460.n.a.a	ENSGT00940000166741	ENSGT00940000156397.a.b.a	ENSGT01010000223553.a	ENSGT00940000167415.c	ENSGT01040000240385.A.a.a.a.b	ENSGT01040000240385.A.a.b.b.e.b	ENSGT01040000240400.c.b.b.a.a.a	ENSGT01040000240385.H.g.e.b	ENSGT01030000234592.A.a.a.a.a
River trout	MODERN SPECIES	38	ENSSTUG00000001098	ENSSTUG00000001110	ENSSTUG00000001114	ENSSTUG00000001419	ENSSTUG00000001430	cbln11 (ENSSTUG00000001434)	ltb4r (ENSSTUG00000001436)	LTB4R (ENSSTUG00000001440)	ENSSTUG00000001445	prkd4 (ENSSTUG00000001455)	ENSSTUG00000001465	PACS1 (ENSSTUG00000001502)	sf3b2 (ENSSTUG00000001631)	capn1 (ENSSTUG00000002281)	pnp5a (ENSSTUG00000005987)	KCNJ10 (ENSSTUG00000006044) ##22	ENSSTUG00000006049	ENSSTUG00000006052	ENSSTUG00000006061	ENSSTUG00000006079	ndrg2 (ENSSTUG00000006097)	ENSSTUG00000006236	ENSSTUG00000006243	ENSSTUG00000006273	ENSSTUG00000006285	ENSSTUG00000006312	ENSSTUG00000006316	ENSSTUG00000006331	znf219 (ENSSTUG00000006341)	ENSSTUG00000006360	btr12 (ENSSTUG00000006372)
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000090905	ENSSSAG00000048787	ENSSSAG00000048780	ENSSSAG00000048776	ENSSSAG00000048772	ENSSSAG00000112885	ENSSSAG00000111188	prkd4 (ENSSSAG00000048719)	ENSSSAG00000058067	ENSSSAG00000121847	sf3b2 (ENSSSAG00000045050)	CAN1 (ENSSSAG00000039784)	ENSSSAG00000110129	pnp5a (ENSSSAG00000038936)	ENSSSAG00000038748	ENSSSAG00000038496 ##22	ENSSSAG00000117878	ENSSSAG00000037924	ENSSSAG00000094690	ENSSSAG00000037801	ENSSSAG00000072737	ENSSSAG00000116548	ENSSSAG00000072224	ENSSSAG00000072208	ENSSSAG00000072194	ENSSSAG00000072205	ENSSSAG00000097548	ENSSSAG00000072183	znf219 (ENSSSAG00000072190)	ENSSSAG00000099010	btr12 (ENSSSAG00000072167)
Salmoninae	ANCESTRAL SPECIES	429	ENSGT00940000164143.a.a	ENSGT00940000163520.A.a.a.a.a.a.b.d	ENSGT00940000154311.a.a.a.b.i.a	ENSGT01100000263538.A.a.a.a.l.b.b.b.b.b	ENSGT00940000158837.h	ENSGT01100000263538.A.a.a.a.l.b.b.b.a	ENSGT00950000182966.C.a.p.a	ENSGT00950000182966.C.b.b.d	ENSGT00950000183024.a.a.a.f	ENSGT00940000166677.d	ENSGT00950000183209.a.a.b.d.b	ENSGT00950000183209.a.a.a	ENSGT00390000006734.a.d	ENSGT00940000159147.b.b.f	ENSGT00950000182991.A.b.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b.f	ENSGT01030000234540.C.i.b.a	ENSGT01030000234994.i	ENSGT00390000012496.b.h.b	ENSGT00940000158350.c
Salmoninae_a	ANCESTRAL SPECIES	34	ENSGT00940000154807.a.b.a.a.c	ENSGT00940000164143.a.b.n	ENSGT00940000164143.a.a	ENSGT00940000154311.a.a.a.b.i.b	ENSGT01100000263538.A.a.a.a.l.b.b.a.a.a	ENSGT00940000158837.h.b.a	ENSGT01100000263538.A.a.a.a.l.b.b.b.a	ENSGT01050000246201	ENSGT00950000182966.C.b.b.d	ENSGT00950000183024.a.a.a.f	ENSGT00940000166677.d	ENSGT00950000183209.a.a.a	ENSGT00390000006734.a.d	ENSGT00940000159147.b.b.f	ENSGT00950000182991.A.b.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b.f	ENSGT00990000204141.B.a.a	ENSGT01030000234540.C.i.b.b	ENSGT01030000234994.i	ENSGT00390000012496.b.h.b	ENSGT00940000158350.c	ENSGT01030000234540.C.i.a.b	ENSGT01030000234994.j	ENSGT00390000012496.b.h.a	ENSGT00940000158350.d	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.l.a.a	ENSGT00940000153968.a.b.b.b.o.a	ENSGT00940000157436.a.d.a	ENSGT00940000159785.g
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT00940000164143.a.b.n	ENSGT00940000164143.a.a	ENSGT00940000163520.A.a.a.a.a.a.b.d	ENSGT00940000154311.a.a.a.b.i.a	ENSGT01100000263538.A.a.a.a.l.b.b.b.b.b	ENSGT00940000158837.h.a	ENSGT01100000263538.A.a.a.a.l.b.b.a.b	ENSGT01050000246201	ENSGT00950000182966.C.b.b.d	ENSGT00950000183024.a.a.a.f	ENSGT00940000166677.d	ENSGT00950000183209.a.a.a	ENSGT00390000006734.a.d	ENSGT00940000159147.b.b.f	ENSGT00950000182991.A.b.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b.f	ENSGT00990000204141.B.a.a	ENSGT01030000234540.C.i.b.b	ENSGT01030000234994.i	ENSGT00390000012496.b.h.b	ENSGT00940000158350.c	ENSGT00950000182933.C.j.e	ENSGT01100000263538.A.a.a.a.l.a.a	ENSGT00940000153968.a.b.b.b.o.a	ENSGT00940000157436.a.d.a	ENSGT00940000159785.g	ENSGT00950000182923.A.ib.b.b	ENSGT00940000165459.a.a.a.h	ENSGT00940000165968.c.b	ENSGT00940000165710.f
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000055622	ENSOMYG00000058438	ENSOMYG00000013964	ENSOMYG00000016080	ENSOMYG00000013976	ENSOMYG00000064081	ltb4r (ENSOMYG00000059121)	ENSOMYG00000013988	prkd4 (ENSOMYG00000014003)	ENSOMYG00000014050	ENSOMYG00000066805	ENSOMYG00000069095	sf3b2 (ENSOMYG00000014895)	capn1 (ENSOMYG00000014849)	pnp5a (ENSOMYG00000014781)	ENSOMYG00000014764 ##22	ENSOMYG00000075799	ENSOMYG00000014750	ENSOMYG00000049698	ENSOMYG00000014638	ENSOMYG00000055619	ENSOMYG00000075495	ENSOMYG00000052004	ENSOMYG00000048922	ENSOMYG00000067314	ENSOMYG00000014540	ENSOMYG00000014508	vangl2 (ENSOMYG00000073893)	ENSOMYG00000014254	ENSOMYG00000060891	ENSOMYG00000062931
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT00940000154807.a.b.a.a.c	ENSGT00940000164143.a.b.n	ENSGT00940000164143.a.a	ENSGT00940000163520.A.a.a.a.a.a.b.d	ENSGT00940000154311.a.a.a.b.i.a	ENSGT01100000263538.A.a.a.a.l.b.b.b.b.b	ENSGT00940000158837.h.a	ENSGT01050000246201	ENSGT00950000182966.C.b.b.d	ENSGT00950000183024.a.a.a.f	ENSGT00940000166677.d	ENSGT00950000183209.a.a.a	ENSGT00390000006734.a.d	ENSGT00940000159147.b.b.f	ENSGT00950000182991.A.b.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b.f	ENSGT00990000204141.B.a.a	ENSGT01030000234540.C.i.b.b	ENSGT01030000234994.i	ENSGT00390000012496.b.h.b	ENSGT00940000158350.c	ENSGT00950000182933.C.j.e	ENSGT01100000263538.A.a.a.a.l.a.a	ENSGT00940000153968.a.b.b.b.o.a	ENSGT00940000157436.a.d.a	ENSGT00940000159785.g	ENSGT00950000182923.A.ib.b.b	ENSGT00940000165459.a.a.a.h	ENSGT00940000165968.c.b	ENSGT00940000165710.f
Chinook salmon	MODERN SPECIES	1	ENSOTSG00005007694	ENSOTSG00005007691	ENSOTSG00005007378	pik3c3 (ENSOTSG00005007373)	ENSOTSG00005007371	rgp1 (ENSOTSG00005007365)	GBA2 (ENSOTSG00005007241)	ADISSP (ENSOTSG00005007229)	vax2 (ENSOTSG00005007228)	ENSOTSG00005007227	tex261 (ENSOTSG00005007226)	f13a1b (ENSOTSG00005006425)	ENSOTSG00005006422	ENSOTSG00005006412	ENSOTSG00005006408	KCNJ10 (ENSOTSG00005006406) ##22	ENSOTSG00005006405	ENSOTSG00005006404	ENSOTSG00005006402	ENSOTSG00005006401	ENSOTSG00005006399	ENSOTSG00005006392	rps6kc1 (ENSOTSG00005006383)	intu (ENSOTSG00005006382)	ino80b (ENSOTSG00005006381)	AADAT (ENSOTSG00005006351)	mfap3l (ENSOTSG00005006346)	CLCN3 (ENSOTSG00005006277)	nit1 (ENSOTSG00005006267)	pfdn2 (ENSOTSG00005006263)	b4gat1 (ENSOTSG00005006260)
Coho salmon	MODERN SPECIES	7	ENSOKIG00005035276	ENSOKIG00005035284	ltb4r (ENSOKIG00005035317)	ENSOKIG00005035330	ENSOKIG00005035342	prkd4 (ENSOKIG00005035367)	ENSOKIG00005035470	ENSOKIG00005036051	ENSOKIG00005036063	ENSOKIG00005036065	sf3b2 (ENSOKIG00005036088)	capn1 (ENSOKIG00005036234)	ENSOKIG00005036832	ENSOKIG00005036859	pnp5a (ENSOKIG00005036885)	KCNJ10 (ENSOKIG00005037127) ##22	ENSOKIG00005037159	ENSOKIG00005037191	ENSOKIG00005037204	ENSOKIG00005037223	ENSOKIG00005037251	ENSOKIG00005037276	ENSOKIG00005037317	ENSOKIG00005037343	ENSOKIG00005037396	ENSOKIG00005037414	ENSOKIG00005037450	ENSOKIG00005037483	ENSOKIG00005037558	vangl2 (ENSOKIG00005037567)	ENSOKIG00005037674
Salmo	ANCESTRAL SPECIES	51	ENSGT00940000154368.s.k	ENSGT00950000182872.f.b.b.q	ENSGT00940000156907.p.b.b.c.a	ENSGT00940000154807.a.b.a.a.c	ENSGT01060000248575.D.c.b.b.a.m.b.a.b.a	ENSGT00940000164143.a.b.n	ENSGT00940000164143.a.a	ENSGT00950000182966.C.a.p.a	ENSGT00950000182966.C.b.b.d	ENSGT00950000183024.a.a.a.f	ENSGT00940000166677.d	ENSGT00950000183209.a.a.b.d.b	ENSGT00390000006734.a.d	ENSGT00940000159147.b.b.f	ENSGT00950000182991.A.b.b.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.a.b ##22	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.b.f	ENSGT01030000234540.C.i.b.b.a	ENSGT01030000234540.C.i.b.a	ENSGT01030000234994.i	ENSGT01030000234540.B.a	ENSGT00390000012496.b.h.b	ENSGT00940000158350.c	ENSGT01100000263538.A.a.a.a.l.a.a	ENSGT00940000153968.a.b.b.b.o.a	ENSGT00940000157436.a.d.a	ENSGT00940000159785.g	ENSGT00950000182923.A.ib.b.b	ENSGT00940000165459.a.a.a.h	ENSGT00940000165968.c.b	ENSGT00940000165710.f
River trout	MODERN SPECIES	35	ENSSTUG00000022947	ENSSTUG00000022940	ENSSTUG00000022928	ENSSTUG00000022908	ENSSTUG00000022901	ENSSTUG00000022886	ENSSTUG00000022820	ltb4r (ENSSTUG00000022805)	ENSSTUG00000022794	prkd4 (ENSSTUG00000022719)	ENSSTUG00000022658	ENSSTUG00000022632	sf3b2 (ENSSTUG00000022480)	capn1 (ENSSTUG00000021107)	pnp5a (ENSSTUG00000021033)	KCNJ10 (ENSSTUG00000021018) ##22	ENSSTUG00000021014	ENSSTUG00000020936	ENSSTUG00000020904	ENSSTUG00000020884	ENSSTUG00000020876	ENSSTUG00000020871	ENSSTUG00000020851	ENSSTUG00000020841	ENSSTUG00000020836	ENSSTUG00000020828	ENSSTUG00000020704	ENSSTUG00000020672	ENSSTUG00000020630	ENSSTUG00000020617	ENSSTUG00000020605
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000089139	ENSSSAG00000090095	ENSSSAG00000052418	ENSSSAG00000052427	ENSSSAG00000086857	ENSSSAG00000116163	ENSSSAG00000070404	ENSSSAG00000121289	ENSSSAG00000070401	ENSSSAG00000096385	prkd4 (ENSSSAG00000068088)	ENSSSAG00000047234	ENSSSAG00000116929	sf3b2 (ENSSSAG00000054283)	CAN1 (ENSSSAG00000043405)	ENSSSAG00000043119 ##22	pnp5a (ENSSSAG00000121780)	ENSSSAG00000043109	ENSSSAG00000043093	ENSSSAG00000099803	ENSSSAG00000117828	ENSSSAG00000055625	ENSSSAG00000055608	ENSSSAG00000055277	ENSSSAG00000099201	ENSSSAG00000117614	ENSSSAG00000104088	ENSSSAG00000113171	ENSSSAG00000115150	ACTN3 (ENSSSAG00000039561)	ENSSSAG00000054562
Huchen	MODERN SPECIES	2715													sf3b2 (ENSHHUG00000049630)	capn1 (ENSHHUG00000047962)	pnp5a (ENSHHUG00000047946)	KCNJ10 (ENSHHUG00000047940) ##22
Northern pike	MODERN SPECIES	23	ENSELUG00000030760	ENSELUG00000031106	ENSELUG00000005249	ENSELUG00000030107	ENSELUG00000004841	ENSELUG00000005043	ENSELUG00000027561	ENSELUG00000032800	ENSELUG00000024849	prkd4 (ENSELUG00000005316)	ENSELUG00000005406	PACS1 (ENSELUG00000027042)	sf3b2 (ENSELUG00000005586)	capn1 (ENSELUG00000005739)	pnp5a (ENSELUG00000005873)	KCNJ10 (ENSELUG00000005931) ##22	ENSELUG00000006096	ENSELUG00000027858	ENSELUG00000006150	ENSELUG00000027030	ENSELUG00000005001	ENSELUG00000006205	ENSELUG00000006236	ENSELUG00000000197	vangl2 (ENSELUG00000006271)	ENSELUG00000006411	MYADM (ENSELUG00000006475)	ltb4r2a (ENSELUG00000006489)	ENSELUG00000006524	ltb4r (ENSELUG00000006557)	slc12a10.1 (ENSELUG00000007246)
Protacanthopterygii	ANCESTRAL SPECIES	32	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000161304.a.b.b	ENSGT00940000156073.c.a.b	ENSGT00940000154327.a	ENSGT00390000001523	ENSGT01020000230412.A.c.b.c.b	ENSGT00950000182991.A.b.b.a	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22
Salmoninae	ANCESTRAL SPECIES	111	ENSGT00940000164530.c	ENSGT00940000155404.i.a.d.a	ENSGT00940000157375.d.d	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a	ENSGT00390000000566.cb	ENSGT00940000159936.c	ENSGT01030000234556.a.b.b.a	ENSGT00940000157783.j	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a.a	ENSGT01080000257365.b.a.b.b.b ##18	ENSGT00950000183073.a.a.a.gc	ENSGT00940000166891.b.a	ENSGT00940000154653.fb.a.a	ENSGT00950000183208.B.f.b.b	ENSGT00950000183208.B.f.b.a.a	ENSGT00950000182860.a.a.b.a.a.d
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT00940000155404.i.a.d.a	ENSGT00940000157375.d.d	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000166147.e	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a	ENSGT00390000000566.cb	ENSGT00940000159936.c	ENSGT01030000234556.a.b.b.a	ENSGT00940000157783.j	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a.a	ENSGT01080000257365.b.a.b.b.b ##18	ENSGT00950000183073.a.a.a.gc	ENSGT00940000166891.b.a	ENSGT00940000154653.fb.a.a	ENSGT00950000183208.B.f.b.b	ENSGT00950000183208.B.f.b.a.a	ENSGT00950000183116.b.a.a.b.a.b.o.b
Salmo	ANCESTRAL SPECIES	5	ENSGT00940000156845.nc.b	ENSGT00940000164530.c	ENSGT00940000155404.i.a.d.a	ENSGT00940000157375.d.d	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a	ENSGT00390000000566.cb	ENSGT00940000159936.c	ENSGT01030000234556.a.b.b.a	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a.a	ENSGT01080000257365.b.a.b.b.b ##18	ENSGT00950000183073.a.a.a.gc	ENSGT00940000166891.b.a	ENSGT00940000154653.fb.a.a	ENSGT00950000183208.B.f.b.b	ENSGT00950000183208.B.f.b.a.a	ENSGT00950000183116.b.a.a.b.a.b.o.b	ENSGT00950000182860.a.a.b.a.a.d
River trout	DUPLICATION
River trout	MODERN SPECIES	24	ENSSTUG00000007201	arhgef18a (ENSSTUG00000007211)	sppl2 (ENSSTUG00000007325)	lsm7 (ENSSTUG00000007668)	DAPK3 (ENSSTUG00000007714)	ENSSTUG00000007777	ENSSTUG00000007789	ENSSTUG00000007812	prkci (ENSSTUG00000007919)	SKIL (ENSSTUG00000009992)	SHISAL2A (ENSSTUG00000010001)	ENSSTUG00000010004	slc1a7a (ENSSTUG00000010011)	ENSSTUG00000010065	KCNJ10 (ENSSTUG00000010077) ##22	KCNJ10 (ENSSTUG00000010093) ##22	kirrel1b (ENSSTUG00000010119)	cadm3 (ENSSTUG00000010238)	sdhc (ENSSTUG00000010455)	atp1a2a (ENSSTUG00000010539)	mpz (ENSSTUG00000012518)	ENSSTUG00000012573	PIP4P1 (ENSSTUG00000012588)	KCNJ9 (ENSSTUG00000012603) ##18	eif3f (ENSSTUG00000012623)	ENSSTUG00000012841	SVIL (ENSSTUG00000012955)	ENSSTUG00000014528	ZEB1 (ENSSTUG00000014535)	ENSSTUG00000014541	ARHGAP12 (ENSSTUG00000014574)
River trout	MODERN SPECIES	24	insra (ENSSTUG00000006907)	ENSSTUG00000007201	arhgef18a (ENSSTUG00000007211)	sppl2 (ENSSTUG00000007325)	lsm7 (ENSSTUG00000007668)	DAPK3 (ENSSTUG00000007714)	ENSSTUG00000007777	ENSSTUG00000007789	ENSSTUG00000007812	prkci (ENSSTUG00000007919)	SKIL (ENSSTUG00000009992)	SHISAL2A (ENSSTUG00000010001)	ENSSTUG00000010004	slc1a7a (ENSSTUG00000010011)	ENSSTUG00000010065	KCNJ10 (ENSSTUG00000010077) ##22	KCNJ10 (ENSSTUG00000010093) ##22	kirrel1b (ENSSTUG00000010119)	cadm3 (ENSSTUG00000010238)	sdhc (ENSSTUG00000010455)	atp1a2a (ENSSTUG00000010539)	mpz (ENSSTUG00000012518)	ENSSTUG00000012573	PIP4P1 (ENSSTUG00000012588)	KCNJ9 (ENSSTUG00000012603) ##18	eif3f (ENSSTUG00000012623)	ENSSTUG00000012841	SVIL (ENSSTUG00000012955)	ENSSTUG00000014528	ZEB1 (ENSSTUG00000014535)	ENSSTUG00000014541
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000046454	mfsd14a2 (ENSSSAG00000045290)	insra (ENSSSAG00000041161)	arhgef18a (ENSSSAG00000040945)	sppl2 (ENSSSAG00000040696)	ENSSSAG00000096514	ENSSSAG00000040414	ENSSSAG00000116265	phc3 (ENSSSAG00000040282)	prkci (ENSSSAG00000009136)	ENSSSAG00000110903	ENSSSAG00000008713	ENSSSAG00000121333	ENSSSAG00000008079	ENSSSAG00000008027	ENSSSAG00000008002 ##22	kirrel1b (ENSSSAG00000007375)	ENSSSAG00000107492	ENSSSAG00000111806	cadm3 (ENSSSAG00000081635)	ENSSSAG00000088262	sdhc (ENSSSAG00000081633)	atp1a2a (ENSSSAG00000081598)	ENSSSAG00000081557	ENSSSAG00000081554 ##18	ENSSSAG00000081552	ENSSSAG00000081550	ENSSSAG00000081469	ZEB1 (ENSSSAG00000049587)	ENSSSAG00000049771	KIF5B (ENSSSAG00000058578)
Oncorhynchus	ANCESTRAL SPECIES	11	ENSGT00940000164530.d.b	ENSGT00940000155404.i.a.d.a	ENSGT00940000157375.d.d	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a	ENSGT00390000000566.cb	ENSGT00940000159936.c	ENSGT01030000234556.a.b.b.a	ENSGT00940000157783.j	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a.a	ENSGT01080000257365.b.a.b.b.b ##18	ENSGT00950000183073.a.a.a.gc	ENSGT00940000166891.b.a	ENSGT00940000154653.fb.a.a	ENSGT00950000183208.B.f.b.a.a	ENSGT00950000183116.b.a.a.b.a.b.o.b	ENSGT00950000182860.a.a.b.a.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	24	ENSGT00940000164530.d.b	ENSGT00940000155404.i.a.d.a	ENSGT00940000157375.d.d	ENSGT00940000158753.h	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b ##22	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a	ENSGT00390000000566.cb	ENSGT00940000159936.c	ENSGT01030000234556.a.b.b.a	ENSGT00940000157783.j	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a.a	ENSGT01080000257365.b.a.b.b.b ##18	ENSGT00950000183073.a.a.a.gc	ENSGT00940000166891.b.a	ENSGT00940000154653.fb.a.a	ENSGT00950000183208.B.f.b.a.a	ENSGT00950000183116.b.a.a.b.a.b.o.b	ENSGT00950000182860.a.a.b.a.a.d
Chinook salmon	MODERN SPECIES	20	ENSOTSG00005013380	ENSOTSG00005013371	ENSOTSG00005013370	insra (ENSOTSG00005012927)	arhgef18a (ENSOTSG00005012924)	ENSOTSG00005012923	lsm7 (ENSOTSG00005012920)	ENSOTSG00005012919	ENSOTSG00005012918	ENSOTSG00005012916	prkci (ENSOTSG00005009959)	ENSOTSG00005009953	SHISAL2A (ENSOTSG00005009952)	slc1a7a (ENSOTSG00005009951)	ENSOTSG00005009950	KCNJ10 (ENSOTSG00005009949) ##22	kirrel1b (ENSOTSG00005009843)	cadm3 (ENSOTSG00005009837)	sdhc (ENSOTSG00005009834)	ENSOTSG00005009832	atp1a2a (ENSOTSG00005007964)	mpz (ENSOTSG00005007949)	lig1 (ENSOTSG00005007948)	ENSOTSG00005007947	PIP4P1 (ENSOTSG00005007946)	KCNJ9 (ENSOTSG00005007945) ##18	eif3f (ENSOTSG00005007125)	ENSOTSG00005007115	SVIL (ENSOTSG00005004104)	ZEB1 (ENSOTSG00005004054)	cbln10 (ENSOTSG00005004053)
Coho salmon	MODERN SPECIES	19	ENSOKIG00005047609	INSR (ENSOKIG00005047213)	arhgef18a (ENSOKIG00005047139)	ENSOKIG00005047124	lsm7 (ENSOKIG00005047106)	DAPK3 (ENSOKIG00005047035)	ENSOKIG00005047009	ENSOKIG00005046995	ENSOKIG00005046986	ENSOKIG00005046981	prkci (ENSOKIG00005045540)	ENSOKIG00005045456	SHISAL2A (ENSOKIG00005045449)	SLC1A7 (ENSOKIG00005045439)	ENSOKIG00005045432	KCNJ10 (ENSOKIG00005045421) ##22	kirrel1b (ENSOKIG00005045019)	ENSOKIG00005044975	cadm3 (ENSOKIG00005044936)	sdhc (ENSOKIG00005044903)	ENSOKIG00005044898	atp1a2a (ENSOKIG00005044610)	mpz (ENSOKIG00005044559)	lig1 (ENSOKIG00005044511)	ENSOKIG00005044487	PIP4P1 (ENSOKIG00005044474)	KCNJ9 (ENSOKIG00005044463) ##18	EIF3F (ENSOKIG00005044410)	ENSOKIG00005044393	SVIL (ENSOKIG00005042167)	ZEB1 (ENSOKIG00005041846)
Rainbow trout	MODERN SPECIES	20	insra (ENSOMYG00000039979)	arhgef18a (ENSOMYG00000040765)	sppl2 (ENSOMYG00000040811)	ENSOMYG00000040895	ENSOMYG00000040917	ENSOMYG00000040952	ENSOMYG00000062954	ENSOMYG00000040963	ENSOMYG00000063043	prkci (ENSOMYG00000041129)	ENSOMYG00000042548	ENSOMYG00000063979	ENSOMYG00000072104	ENSOMYG00000042596	ENSOMYG00000042653	ENSOMYG00000042661 ##22	kirrel1b (ENSOMYG00000042702)	ENSOMYG00000074730	ENSOMYG00000065412	cadm3 (ENSOMYG00000073423)	ENSOMYG00000042771	sdhc (ENSOMYG00000042774)	atp1a2a (ENSOMYG00000042865)	mpz (ENSOMYG00000043249)	ENSOMYG00000043259	ENSOMYG00000043276	ENSOMYG00000043298 ##18	ENSOMYG00000043341	ENSOMYG00000050987	ENSOMYG00000043884	ENSOMYG00000059840
Huchen	MODERN SPECIES	94	ENSHHUG00000050599	mfsd14a2 (ENSHHUG00000050575)	insra (ENSHHUG00000050183)	arhgef18a (ENSHHUG00000050150)	sppl2 (ENSHHUG00000050122)	lsm7 (ENSHHUG00000050071)	DAPK3 (ENSHHUG00000050062)	ENSHHUG00000050052	ENSHHUG00000050045	ENSHHUG00000050034	prkci (ENSHHUG00000049789)	SKIL (ENSHHUG00000049776)	ENSHHUG00000049772	slc1a7a (ENSHHUG00000049761)	ENSHHUG00000049754	KCNJ10 (ENSHHUG00000049749) ##22	kirrel1b (ENSHHUG00000049679)	ENSHHUG00000049675	cadm3 (ENSHHUG00000049642)	sdhc (ENSHHUG00000049633)	atp1a2a (ENSHHUG00000048616)	mpz (ENSHHUG00000048615)	ENSHHUG00000048613	ENSHHUG00000048608	ERFL (ENSHHUG00000048600)	PIP4P1 (ENSHHUG00000048591)	KCNJ9 (ENSHHUG00000048582) ##18	eif3f (ENSHHUG00000048540)	ENSHHUG00000048535	SVIL (ENSHHUG00000048242)
Northern pike	MODERN SPECIES	2	ENSELUG00000013373	ENSELUG00000028866	ENSELUG00000013275	prkci (ENSELUG00000013218)	ENSELUG00000013131	gpr160 (ENSELUG00000013084)	nadkb (ENSELUG00000013005)	SHISAL2A (ENSELUG00000012967)	slc1a7a (ENSELUG00000012954)	scp2a (ENSELUG00000012894)	czib (ENSELUG00000029080)	uck2 (ENSELUG00000012833)	ENSELUG00000012855	ENSELUG00000012783	ENSELUG00000012756	KCNJ10 (ENSELUG00000012705) ##22	ENSELUG00000012641	ENSELUG00000001262	ENSELUG00000012587	ENSELUG00000012547	kirrel1b (ENSELUG00000012509)	cadm3 (ENSELUG00000012396)	sdhc (ENSELUG00000012276)	atp1a2a (ENSELUG00000001123)	mpz (ENSELUG00000012164)	lig1 (ENSELUG00000012136)	ENSELUG00000012069	PIP4P1 (ENSELUG00000012051)	dnaaf6 (ENSELUG00000012022)	KCNJ9 (ENSELUG00000012004) ##18	eif3f (ENSELUG00000011987)
Acanthomorphata	ANCESTRAL SPECIES	50	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES	17	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b	ENSGT00940000163711.a	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.b.b
Percomorphaceae	ANCESTRAL SPECIES	18	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b	ENSGT00940000163711.a	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00940000178350	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.b.b
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT01030000235161	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.b	ENSGT01090000260029.a.a.a.a.a.a.a.a
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203774	ENSGT01030000234540.C	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b
Atherinomorphae	ANCESTRAL SPECIES	22	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a.d	ENSGT00940000163711.a.a.b	ENSGT01030000235219	ENSGT00940000158388	ENSGT01050000244843.c.a.b.a.a.b.a.b	ENSGT01050000244843.c.b.a.b	ENSGT00940000177359	ENSGT00940000157094	ENSGT00940000164076.a.a	ENSGT00940000162034	ENSGT00940000160883.b	ENSGT00940000165991	ENSGT00940000164592	ENSGT00940000153284.a.mc.a	ENSGT00940000153904.b
Cyprinodontiformes	ANCESTRAL SPECIES	22	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a.d	ENSGT00940000163711.a.a.b	ENSGT01030000235219	ENSGT00990000203754	ENSGT00940000158388	ENSGT01050000244843.c.a.b.a.a.b.a.b	ENSGT01050000244843.c.b.a.b	ENSGT00940000177359	ENSGT00940000157094	ENSGT00940000164076.a.a	ENSGT00940000162034	ENSGT00940000160883.b	ENSGT00940000165991	ENSGT00940000164592	ENSGT00940000153284.a.mc.a
Aplocheiloidei	ANCESTRAL SPECIES	55	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22
Mangrove rivulus	MODERN SPECIES	344						GAL3ST3 (ENSKMAG00000020470)	ccs (ENSKMAG00000020453)	rbm14b (ENSKMAG00000020444)	actn3a (ENSKMAG00000020367)	prkd4 (ENSKMAG00000020294)	ENSKMAG00000020253	pacs1a (ENSKMAG00000020214)	sf3b2 (ENSKMAG00000020181)	capn1 (ENSKMAG00000020121)	pnp5a (ENSKMAG00000020103)	KCNJ10 (ENSKMAG00000020083) ##22
Turquoise killifish	MODERN SPECIES	1613	zgc:101810 (ENSNFUG00015020996)	ENSNFUG00015020993	GAL3ST3 (ENSNFUG00015020989)	GAL3ST3 (ENSNFUG00015020988)	GAL3ST3 (ENSNFUG00015020987)	GAL3ST3 (ENSNFUG00015020986)	ENSNFUG00015020985	ccs (ENSNFUG00015020981)	RBM14B (ENSNFUG00015020979)	actn3b (ENSNFUG00015020890)	ENSNFUG00015020568	pacs1a (ENSNFUG00015020166)	sf3b2 (ENSNFUG00015019959)	capn1 (ENSNFUG00015011424)	pnp5a (ENSNFUG00015010830)	KCNJ10 (ENSNFUG00015010812) ##22	ENSNFUG00015010798	ankrd46b (ENSNFUG00015010792)	COL4A6 (ENSNFUG00015010735)	COL4A5 (ENSNFUG00015010565)	GC2 (ENSNFUG00015010538)	gc2 (ENSNFUG00015008610)	RASL11A (ENSNFUG00015008485)	ENSNFUG00015008331	arhgap36 (ENSNFUG00015008307)	ENSNFUG00015008300	cited1 (ENSNFUG00015008291)	ENSNFUG00015008287	HDAC8 (ENSNFUG00015008243)	ENSNFUG00015007313	leap2 (ENSNFUG00015007170)
Cyprinodontoidei	ANCESTRAL SPECIES	21	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A.nb	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a.d.b	ENSGT00940000163711.a.a.b	ENSGT01030000235219.c	ENSGT00940000158388	ENSGT01050000244843.c.a.b.a.a.b.a.b	ENSGT01050000244843.c.b.a.b	ENSGT00940000177359	ENSGT00940000157094	ENSGT00940000164076.a.a	ENSGT00940000162034	ENSGT00940000160883.b	ENSGT00940000165991	ENSGT00940000164592	ENSGT00940000153284.a.mc.a	ENSGT00940000153904.b
NAME_4	ANCESTRAL SPECIES	115	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A.ob	ENSGT00950000182923.A.nb	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a.d.b
Mummichog	MODERN SPECIES	311	six7 (ENSFHEG00000021424)	ENSFHEG00000021409	zgc:101810 (ENSFHEG00000021396)	ENSFHEG00000021332	GAL3ST3 (ENSFHEG00000021326)	GAL3ST3 (ENSFHEG00000021308)	ccs (ENSFHEG00000021301)	rbm14b (ENSFHEG00000021265)	actn3a (ENSFHEG00000021252)	prkd4 (ENSFHEG00000021187)	ENSFHEG00000021142	pacs1a (ENSFHEG00000021051)	sf3b2 (ENSFHEG00000020968)	capn1 (ENSFHEG00000020951)	pnp5a (ENSFHEG00000020893)	KCNJ10 (ENSFHEG00000020859) ##22
Sheepshead minnow	MODERN SPECIES	1484																KCNJ10 (ENSCVAG00000005593) ##22	ENSCVAG00000005568
Poeciliinae	ANCESTRAL SPECIES	21	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A.nb	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000235219.c	ENSGT00940000162700.e.a.a.b.b	ENSGT01030000235161.c.b	ENSGT00940000162700.e.a.a.b.a.a.d.b	ENSGT00940000163711.a.a.b.o	ENSGT00940000162700.e.a.a.b.a.a.d.a.a.a	ENSGT00940000177485.b
Poecilia	ANCESTRAL SPECIES	32	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A.nb	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000235219.c	ENSGT00940000162700.e.a.a.b.a.a.d.b	ENSGT00940000163711.a.a.b.o.b.b.b	ENSGT00940000164913	ENSGT01030000235161.c.a.a	ENSGT00730000113581.b.a	ENSGT01030000235161.c.b	ENSGT00940000163711.a.a.b.p	ENSGT00940000163711.a.a.b.o.a.a	ENSGT00990000203754.a	ENSGT00940000163711.a.a.b.o.a.b	ENSGT00940000162700.e.a.a.b.a.a.d.a.a.a	ENSGT00940000177485.b
NAME_6	ANCESTRAL SPECIES	76	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968.e	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A.nb	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a.d.b	ENSGT00940000163711.a.a.b.o.b.b.b	ENSGT00940000164913	ENSGT01030000235161.c.a.a	ENSGT00730000113581.b.a
Amazon molly	MODERN SPECIES	399	pfdn2 (ENSPFOG00000004074)	b4gat1 (ENSPFOG00000004055)	six7 (ENSPFOG00000004034)	zgc:101810 (ENSPFOG00000003975)	ENSPFOG00000003784	GAL3ST3 (ENSPFOG00000003743)	ccs (ENSPFOG00000003644)	rbm14b (ENSPFOG00000003614)	actn3a (ENSPFOG00000021803)	prkd4 (ENSPFOG00000003603)	ENSPFOG00000003372	pacs1a (ENSPFOG00000002864)	sf3b2 (ENSPFOG00000002552)	capn1 (ENSPFOG00000001254)	pnp5a (ENSPFOG00000000669)	KCNJ10 (ENSPFOG00000000630) ##22	ENSPFOG00000000606	ENSPFOG00000000591	ENSPFOG00000023142	zgc:158659 (ENSPFOG00000000426)	ENSPFOG00000022926	ENSPFOG00000022323	ENSPFOG00000000410	ENSPFOG00000022777	ENSPFOG00000021797	ENSPFOG00000023400	ENSPFOG00000000405
Sailfin molly	MODERN SPECIES	1932														capn1 (ENSPLAG00000011249)	pnp5a (ENSPLAG00000011265)	KCNJ10 (ENSPLAG00000011353) ##22	ENSPLAG00000011368	ENSPLAG00000011385	ENSPLAG00000011397	ENSPLAG00000011430
Guppy	MODERN SPECIES	444	six7 (ENSPREG00000003088)	zgc:101810 (ENSPREG00000003066)	ENSPREG00000003057	GAL3ST3 (ENSPREG00000003048)	ENSPREG00000003041	ccs (ENSPREG00000003024)	rbm14b (ENSPREG00000003013)	actn3a (ENSPREG00000002956)	prkd4 (ENSPREG00000002903)	ENSPREG00000002830	ENSPREG00000002814	pacs1a (ENSPREG00000002707)	sf3b2 (ENSPREG00000002665)	capn1 (ENSPREG00000002609)	pnp5a (ENSPREG00000002577)	KCNJ10 (ENSPREG00000002561) ##22	ENSPREG00000002538	ENSPREG00000002505	ENSPREG00000002495	ENSPREG00000002482	ENSPREG00000002466	zgc:158659 (ENSPREG00000002333)	ENSPREG00000002316	ENSPREG00000002298	ENSPREG00000002263	ENSPREG00000002241	ENSPREG00000002228	ENSPREG00000002207	ENSPREG00000002180	ENSPREG00000002149	ENSPREG00000002113
Platyfish	MODERN SPECIES	5	pfdn2 (ENSXMAG00000014699)	b4gat1 (ENSXMAG00000014705)	six7 (ENSXMAG00000022592)	zgc:101810 (ENSXMAG00000013931)	ENSXMAG00000001929	GAL3ST3 (ENSXMAG00000008379)	ccs (ENSXMAG00000008380)	rbm14b (ENSXMAG00000008390)	actn3a (ENSXMAG00000008394)	prkd4 (ENSXMAG00000008438)	ENSXMAG00000002672	pacs1a (ENSXMAG00000008449)	sf3b2 (ENSXMAG00000008467)	capn1 (ENSXMAG00000008475)	pnp5a (ENSXMAG00000008542)	KCNJ10 (ENSXMAG00000008555) ##22	ENSXMAG00000028128	ENSXMAG00000024237	zgc:158659 (ENSXMAG00000008573)	ENSXMAG00000008613	ENSXMAG00000025666	ENSXMAG00000022789	ENSXMAG00000023524	ENSXMAG00000025317	ENSXMAG00000027536	ENSXMAG00000021259	ENSXMAG00000027611	ENSXMAG00000024966	ENSXMAG00000029504	ENSXMAG00000029953	ENSXMAG00000029556
Oryzias	ANCESTRAL SPECIES	29	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000158388	ENSGT00940000163711.a.a.b	ENSGT00390000018904	ENSGT00940000158132.m.a.b	ENSGT00940000165121.b	ENSGT00950000183068.a.a.a.b	ENSGT00940000159429	ENSGT00940000164406	ENSGT01060000248564.b.a.b.b.b.a	ENSGT00950000182962.a.b.a.c	ENSGT01050000244937.a.b.a.a	ENSGT00940000163852.c.a.a.c	ENSGT00940000160459	ENSGT01070000253816.a.a.a.d	ENSGT00940000153763.a
Oryzias_b	ANCESTRAL SPECIES	18	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00990000203754.c.d	ENSGT00940000158388	ENSGT00940000163711.a.a.b	ENSGT01040000240385.A.a.a.b	ENSGT00390000018904	ENSGT00940000158132.m.a.b	ENSGT00940000165121.b	ENSGT00950000183068.a.a.a.b	ENSGT00940000159429	ENSGT00940000164406	ENSGT01060000248564.b.a.b.b.b.a	ENSGT00950000182962.a.b.a.c	ENSGT01050000244937.a.b.a.a	ENSGT00940000163852.c.a.a.c	ENSGT00940000160459
Indian medaka	MODERN SPECIES	19	pfdn2 (ENSOMEG00000016806)	b4gat1 (ENSOMEG00000016819)	six7 (ENSOMEG00000016849)	zgc:101810 (ENSOMEG00000016898)	ENSOMEG00000016929	GAL3ST3 (ENSOMEG00000016944)	ccs (ENSOMEG00000016980)	rbm14b (ENSOMEG00000000910)	actn3a (ENSOMEG00000017089)	prkd4 (ENSOMEG00000017159)	ENSOMEG00000017223	pacs1a (ENSOMEG00000017404)	sf3b2 (ENSOMEG00000017480)	capn1 (ENSOMEG00000017575)	pnp5a (ENSOMEG00000017606)	KCNJ10 (ENSOMEG00000017634) ##22	ENSOMEG00000017659	ENSOMEG00000017677	ENSOMEG00000017693	ENSOMEG00000017716	tmem185 (ENSOMEG00000017753)	ENSOMEG00000017798	ENSOMEG00000017821	vbp1 (ENSOMEG00000017845)	RAB39B (ENSOMEG00000017881)	zgc:162171 (ENSOMEG00000017903)	ENSOMEG00000018197	ENSOMEG00000018275	zgc:92429 (ENSOMEG00000018307)	ENSOMEG00000018638	ENSOMEG00000018707
Javanese ricefish	MODERN SPECIES	9	nit1 (ENSOJAG00000018594)	pfdn2 (ENSOJAG00000018586)	b4gat1 (ENSOJAG00000018579)	six7 (ENSOJAG00000018564)	zgc:101810 (ENSOJAG00000018489)	ENSOJAG00000018419	GAL3ST3 (ENSOJAG00000018398)	ccs (ENSOJAG00000018350)	rbm14b (ENSOJAG00000018327)	prkd4 (ENSOJAG00000017344)	ENSOJAG00000017195	pacs1a (ENSOJAG00000016750)	sf3b2 (ENSOJAG00000016538)	capn1 (ENSOJAG00000010776)	pnp5a (ENSOJAG00000010087)	KCNJ10 (ENSOJAG00000010046) ##22	ENSOJAG00000010021	ENSOJAG00000010011	ENSOJAG00000009988	ENSOJAG00000009938	ENSOJAG00000009891	ENSOJAG00000009811	tmem185 (ENSOJAG00000009774)	ENSOJAG00000009765	ENSOJAG00000009757	ENSOJAG00000009744	vbp1 (ENSOJAG00000009734)	RAB39B (ENSOJAG00000009719)	zgc:162171 (ENSOJAG00000009711)	ENSOJAG00000009494	zgc:92429 (ENSOJAG00000009449)
Oryzias_a	ANCESTRAL SPECIES	33	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000158388	ENSGT00390000018904	ENSGT00940000158132.m.a.b	ENSGT00940000165121.b	ENSGT00950000183068.a.a.a.b	ENSGT00940000159429	ENSGT00940000164406	ENSGT01060000248564.b.a.b.b.b.a	ENSGT00950000182962.a.b.a.c	ENSGT01050000244937.a.b.a.a	ENSGT00940000163852.c.a.a.c	ENSGT00940000160459	ENSGT01070000253816.a.a.a.d	ENSGT00940000153763.a	ENSGT00940000159479.`c.b
Japanese Medaka HdrR	MODERN SPECIES	9	six7 (ENSORLG00000007974)	zgc:101810 (ENSORLG00000008004)	ENSORLG00000021943	ENSORLG00000008010	GAL3ST3 (ENSORLG00000008014)	ccs (ENSORLG00000008041)	rbm14b (ENSORLG00000008051)	actn3a (ENSORLG00000008067)	prkd4 (ENSORLG00000008092)	ENSORLG00000008133	pacs1a (ENSORLG00000008177)	ENSORLG00000028122	sf3b2 (ENSORLG00000008235)	capn1 (ENSORLG00000008280)	pnp5a (ENSORLG00000008292)	ENSORLG00000024246 ##22	tmem185 (ENSORLG00000008310)	vbp1 (ENSORLG00000008340)	ENSORLG00000008345	zgc:162171 (ENSORLG00000024840)	ENSORLG00000026347	zgc:92429 (ENSORLG00000008366)	ENSORLG00000008408	ENSORLG00000008422	ENSORLG00000002160	zgc:109889 (ENSORLG00000008438)	htr2cl1 (ENSORLG00000008442)	ENSORLG00000008474	ENSORLG00000008481	ccnb3 (ENSORLG00000008493)	tnfsf10l (ENSORLG00000008504)
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203774	ENSGT01030000234540.C	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b
Cichlidae	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203774.a.b	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT01090000260411	ENSGT00940000164143.a.a	ENSGT00940000164143.a.b	ENSGT00650000094959	ENSGT00940000154807.a.b.a.a.f	ENSGT00940000156907.p.b.b.a.a	ENSGT00950000182872.f.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	18	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203863.a	ENSGT00940000163711.a.a.b.v.b	ENSGT01060000248671.a.a	ENSGT00990000203863.b.b	ENSGT00990000203774.b.a.a	ENSGT00990000203774.a.b	ENSGT01030000234540.C	ENSGT00940000172777.d	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.b.c	ENSGT01100000263538.A.a.a.a.j.a.b.g.a	ENSGT01100000263538.A.a.a.a.j.b.a
Nile tilapia	MODERN SPECIES	15	pfdn2 (ENSONIG00000034079)	b4gat1 (ENSONIG00000013022)	six7 (ENSONIG00000040567)	zgc:101810 (ENSONIG00000013025)	ENSONIG00000013028	gal3st3 (ENSONIG00000013030)	ccs (ENSONIG00000013032)	rbm14b (ENSONIG00000037508)	actn3a (ENSONIG00000013037)	prkd4 (ENSONIG00000013046)	ENSONIG00000013051	pacs1a (ENSONIG00000013060)	sf3b2 (ENSONIG00000013068)	capn1 (ENSONIG00000013071)	pnp5a (ENSONIG00000013085)	KCNJ10 (ENSONIG00000013089) ##22	ENSONIG00000013956	ENSONIG00000037631	ENSONIG00000037405	ENSONIG00000012993	ENSONIG00000033059	ENSONIG00000039540	ENSONIG00000037861	ENSONIG00000039923	ENSONIG00000038010	ENSONIG00000027898	ENSONIG00000041786	ENSONIG00000000232	ENSONIG00000009150	ENSONIG00000035525	ENSONIG00000031108
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	23	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203863.a	ENSGT00940000163711.a.a.b.v.b	ENSGT01060000248671.a.a	ENSGT00990000203863.b.b
Haplochromini	ANCESTRAL SPECIES	44	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203863.a	ENSGT00940000163711.a.a.b.v.b	ENSGT01060000248671.a.a	ENSGT00990000203863.b.b
Haplochromini_A	ANCESTRAL SPECIES	47	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00990000203863.a	ENSGT00940000163711.a.a.b.v.b	ENSGT01060000248671.a.a	ENSGT00990000203863.b.b	ENSGT00940000163711.a.a.a	ENSGT01080000257693	ENSGT00940000163711.a.a.b.w	ENSGT00940000162700.e.a.a.b.a.b.a.b	ENSGT01060000248671.b.b
Haplochromini_B	ANCESTRAL SPECIES	60	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22
Zebra mbuna	MODERN SPECIES	1106	pfdn2 (ENSMZEG00005020872)	b4gat1 (ENSMZEG00005020868)	six7 (ENSMZEG00005020866)	zgc:101810 (ENSMZEG00005020862)	ENSMZEG00005020857	GAL3ST3 (ENSMZEG00005020850)	ccs (ENSMZEG00005020842)	rbm14b (ENSMZEG00005020834)	actn3a (ENSMZEG00005020827)	prkd4 (ENSMZEG00005020818)	ENSMZEG00005020804	pacs1a (ENSMZEG00005020795)	sf3b2 (ENSMZEG00005020789)	capn1 (ENSMZEG00005020785)	pnp5a (ENSMZEG00005020781)	KCNJ10 (ENSMZEG00005020777) ##22	ENSMZEG00005020774	ENSMZEG00005020771	ENSMZEG00005020766	ENSMZEG00005020760	ENSMZEG00005020756	ENSMZEG00005020752	ENSMZEG00005020746	ENSMZEG00005020741	ENSMZEG00005020732	ENSMZEG00005020728	ENSMZEG00005020724	ENSMZEG00005020707	ENSMZEG00005020698	ENSMZEG00005020691	ENSMZEG00005020690
Eastern happy	MODERN SPECIES	15	pfdn2 (ENSACLG00000014200)	b4gat1 (ENSACLG00000014208)	six7 (ENSACLG00000014217)	zgc:101810 (ENSACLG00000014228)	ENSACLG00000014263	GAL3ST3 (ENSACLG00000014305)	ccs (ENSACLG00000014314)	rbm14b (ENSACLG00000014355)	actn3a (ENSACLG00000014436)	prkd4 (ENSACLG00000014527)	ENSACLG00000014646	pacs1a (ENSACLG00000014719)	sf3b2 (ENSACLG00000014771)	capn1 (ENSACLG00000014931)	pnp5a (ENSACLG00000015046)	KCNJ10 (ENSACLG00000015078) ##22	ENSACLG00000015130	ENSACLG00000015147	ENSACLG00000015161	ENSACLG00000015172	ENSACLG00000015182	ENSACLG00000015197	ENSACLG00000015300	ENSACLG00000015316	ENSACLG00000015336	ENSACLG00000015388	ENSACLG00000015395	ENSACLG00000015405	ENSACLG00000015424	ENSACLG00000015435	ENSACLG00000015453
P. nyererei	MODERN SPECIES	630	six7 (ENSPNYG00000023617)	ENSPNYG00000023615	ENSPNYG00000023611	GAL3ST3 (ENSPNYG00000023610)	ccs (ENSPNYG00000023608)	rbm14b (ENSPNYG00000023605)	actn3a (ENSPNYG00000023603)	prkd4 (ENSPNYG00000023600)	ENSPNYG00000023599	ENSPNYG00000023597	sf3b2 (ENSPNYG00000023594)	capn1 (ENSPNYG00000023590)	ENSPNYG00000023589	pnp5a (ENSPNYG00000023588)	ENSPNYG00000023587	KCNJ10 (ENSPNYG00000023586) ##22	ENSPNYG00000023584
Burton s mouthbrooder	MODERN SPECIES	717	pfdn2 (ENSHBUG00000016585)	b4gat1 (ENSHBUG00000001052)	six7 (ENSHBUG00000000488)	zgc:101810 (ENSHBUG00000016646)	ENSHBUG00000016665	GAL3ST3 (ENSHBUG00000016676)	ccs (ENSHBUG00000016724)	rbm14b (ENSHBUG00000016754)	actn3a (ENSHBUG00000016884)	prkd4 (ENSHBUG00000000500)	ENSHBUG00000017061	pacs1a (ENSHBUG00000017202)	sf3b2 (ENSHBUG00000017349)	capn1 (ENSHBUG00000017437)	pnp5a (ENSHBUG00000017455)	KCNJ10 (ENSHBUG00000017489) ##22
Lyretail cichlid	MODERN SPECIES	431	pfdn2 (ENSNBRG00000003557)	b4gat1 (ENSNBRG00000003545)	six7 (ENSNBRG00000003526)	zgc:101810 (ENSNBRG00000003501)	ENSNBRG00000003454	GAL3ST3 (ENSNBRG00000003442)	ccs (ENSNBRG00000003408)	rbm14b (ENSNBRG00000003378)	actn3a (ENSNBRG00000002956)	prkd4 (ENSNBRG00000002865)	ENSNBRG00000002815	ENSNBRG00000002793	pacs1a (ENSNBRG00000002735)	capn1 (ENSNBRG00000002677)	pnp5a (ENSNBRG00000002661)	KCNJ10 (ENSNBRG00000002634) ##22
Midas cichlid	MODERN SPECIES	120	pfdn2 (ENSACIG00000000182)	b4gat1 (ENSACIG00000000268)	six7 (ENSACIG00000000285)	zgc:101810 (ENSACIG00000000300)	ENSACIG00000000320	GAL3ST3 (ENSACIG00000000351)	ccs (ENSACIG00000000359)	rbm14b (ENSACIG00000000381)	actn3a (ENSACIG00000000398)	prkd4 (ENSACIG00000000474)	ENSACIG00000000529	pacs1a (ENSACIG00000000566)	sf3b2 (ENSACIG00000000624)	capn1 (ENSACIG00000000734)	pnp5a (ENSACIG00000000784)	KCNJ10 (ENSACIG00000000812) ##22
Pomacentridae	ANCESTRAL SPECIES	37	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT00990000203774	ENSGT01030000234540.C	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b.c	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000164143.b
Pomacentridae_A	ANCESTRAL SPECIES	43	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT00990000203774	ENSGT01030000234540.C	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b.c	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000164143.b
Amphiprion	ANCESTRAL SPECIES	50	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000163711.a.a.b.x	ENSGT00940000162700.e.a.a.b.b	ENSGT00990000203774	ENSGT01030000234540.C	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b.c	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000164143.b
Orange clownfish	MODERN SPECIES	15	pfdn2 (ENSAPEG00000003409)	b4gat1 (ENSAPEG00000003401)	six7 (ENSAPEG00000003377)	zgc:101810 (ENSAPEG00000003352)	ENSAPEG00000003295	GAL3ST3 (ENSAPEG00000003242)	ccs (ENSAPEG00000003203)	rbm14b (ENSAPEG00000003161)	actn3a (ENSAPEG00000003098)	prkd4 (ENSAPEG00000003015)	ENSAPEG00000002920	pacs1a (ENSAPEG00000002874)	sf3b2 (ENSAPEG00000002762)	capn1 (ENSAPEG00000002654)	pnp5a (ENSAPEG00000002617)	KCNJ10 (ENSAPEG00000002539) ##22	ENSAPEG00000002518	ENSAPEG00000002481	ENSAPEG00000002448	ENSAPEG00000002440	ENSAPEG00000002430	ENSAPEG00000002411	ENSAPEG00000002386	vangl2 (ENSAPEG00000002354)	ENSAPEG00000002207	MYADM (ENSAPEG00000002187)	ENSAPEG00000002163	ENSAPEG00000002150	ENSAPEG00000002121	ENSAPEG00000002107	ltb4r2a (ENSAPEG00000002049)
Clown anemonefish	MODERN SPECIES	1265																KCNJ10 (ENSAOCG00000015608) ##22	ENSAOCG00000015634	ENSAOCG00000015663	ENSAOCG00000015683	ENSAOCG00000015705	ENSAOCG00000015755	ENSAOCG00000015779	ENSAOCG00000015790	ENSAOCG00000015811	ENSAOCG00000015826	ENSAOCG00000015871	vangl2 (ENSAOCG00000015926)	ENSAOCG00000016047	MYADM (ENSAOCG00000016060)	ENSAOCG00000016082	ENSAOCG00000016099
Spiny chromis	MODERN SPECIES	2794															pnp5a (ENSAPOG00000010443)	KCNJ10 (ENSAPOG00000010457) ##22
Bicolor damselfish	MODERN SPECIES	1448													sf3b2 (ENSSPAG00000004406)	capn1 (ENSSPAG00000004318)	pnp5a (ENSSPAG00000004303)	KCNJ10 (ENSSPAG00000004180) ##22	ENSSPAG00000004147	ENSSPAG00000004132	ENSSPAG00000004109	ENSSPAG00000004089	ENSSPAG00000004070
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.b	ENSGT01030000235161	ENSGT00940000162700.e.a.a.b.a.a	ENSGT00940000163711.a.a.b	ENSGT01030000235219	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT01080000257464	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.a.b
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000235219	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT00990000203863	ENSGT00940000162700.e.a.a.b.a.a	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT01030000235161	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.b.a
Carangaria	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01090000260384	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a
Carangaria_A	ANCESTRAL SPECIES	26	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000235219	ENSGT00940000163711.a.a.b.a.b	ENSGT01080000257540	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a
Seriola	ANCESTRAL SPECIES	24	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01030000235219	ENSGT00940000163711.a.a.b.a.b	ENSGT01080000257540	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.a.b.b	ENSGT01100000263538.A.a.a.a.j.b.b	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260059.b.e.a
Yellowtail amberjack	MODERN SPECIES	3268	b4gat1 (ENSSLDG00000006316)	six7 (ENSSLDG00000006326)	zgc:101810 (ENSSLDG00000006345)	ENSSLDG00000006388	GAL3ST3 (ENSSLDG00000006436)	ccs (ENSSLDG00000006446)	rbm14b (ENSSLDG00000006472)	actn3a (ENSSLDG00000006492)	prkd4 (ENSSLDG00000006554)	ENSSLDG00000006593	pacs1a (ENSSLDG00000006649)	ENSSLDG00000006810	sf3b2 (ENSSLDG00000006838)	capn1 (ENSSLDG00000006919)	pnp5a (ENSSLDG00000006989)	KCNJ10 (ENSSLDG00000007010) ##22	ENSSLDG00000007041	ENSSLDG00000007075	ENSSLDG00000007093	ENSSLDG00000007127	ENSSLDG00000007167	ENSSLDG00000007177	ENSSLDG00000007196	vangl2 (ENSSLDG00000007219)
Greater amberjack	MODERN SPECIES	153	pfdn2 (ENSSDUG00000007866)	b4gat1 (ENSSDUG00000007878)	six7 (ENSSDUG00000007885)	zgc:101810 (ENSSDUG00000007897)	ENSSDUG00000007919	GAL3ST3 (ENSSDUG00000007937)	ccs (ENSSDUG00000007950)	rbm14b (ENSSDUG00000007975)	actn3a (ENSSDUG00000007995)	prkd4 (ENSSDUG00000008079)	ENSSDUG00000008130	pacs1a (ENSSDUG00000008434)	sf3b2 (ENSSDUG00000008499)	capn1 (ENSSDUG00000008549)	pnp5a (ENSSDUG00000008615)	KCNJ10 (ENSSDUG00000008655) ##22	ENSSDUG00000008753	ENSSDUG00000008789	ENSSDUG00000008805	ENSSDUG00000008826	ENSSDUG00000008846	ENSSDUG00000008858	ENSSDUG00000008871	ENSSDUG00000008889
Barramundi perch	MODERN SPECIES	13	b4gat1 (ENSLCAG00010013260)	six7 (ENSLCAG00010013259)	zgc:101810 (ENSLCAG00010013253)	ENSLCAG00010013246	GAL3ST3 (ENSLCAG00010013244)	ccs (ENSLCAG00010013243)	rbm14b (ENSLCAG00010013241)	actn3a (ENSLCAG00010010843)	prkd4 (ENSLCAG00010010411)	ENSLCAG00010010402	pacs1a (ENSLCAG00010010391)	ENSLCAG00010010383	sf3b2 (ENSLCAG00010010182)	capn1 (ENSLCAG00010009827)	pnp5a (ENSLCAG00010009772)	KCNJ10 (ENSLCAG00010009770) ##22	ENSLCAG00010009769	ENSLCAG00010009767	ENSLCAG00010009765	ENSLCAG00010009763	ENSLCAG00010009761	ENSLCAG00010009757	ENSLCAG00010009754
Pleuronectoidei	ANCESTRAL SPECIES	17	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00990000203754	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT00940000155044.A	ENSGT00940000154311.a.a.a.b.d	ENSGT00950000183116.b.a.a.b.a.a.a	ENSGT00940000163520.A.a.a.a.a.a.b	ENSGT00940000164143.a.a	ENSGT00940000164143.a.b	ENSGT00650000094959	ENSGT00940000154807.a.b.a.a.f	ENSGT00940000156907.p.b.b.a.a	ENSGT00950000182872.f.b.b
Tongue sole	MODERN SPECIES		pfdn2 (ENSCSEG00000000410)	b4gat1 (ENSCSEG00000000407)	six7 (ENSCSEG00000000406)	zgc:101810 (ENSCSEG00000000395)	ENSCSEG00000000381	ENSCSEG00000000375	GAL3ST3 (ENSCSEG00000000373)	ccs (ENSCSEG00000000363)	rbm14b (ENSCSEG00000000357)	actn3a (ENSCSEG00000000345)	ENSCSEG00000000254	pacs1a (ENSCSEG00000000243)	sf3b2 (ENSCSEG00000000230)	capn1 (ENSCSEG00000000221)	ENSCSEG00000000218	KCNJ10 (ENSCSEG00000000216) ##22	vangl2 (ENSCSEG00000000214)	ENSCSEG00000000199	MYADM (ENSCSEG00000000196)	ENSCSEG00000020077	ltb4r2a (ENSCSEG00000020074)	ENSCSEG00000020071	ENSCSEG00000020065	ENSCSEG00000020062	slc12a10.3 (ENSCSEG00000020043)	ENSCSEG00000020041	ENSCSEG00000019784	ENSCSEG00000019779	hnrnpc (ENSCSEG00000019769)	ndrg2 (ENSCSEG00000019755)	SORCS2 (ENSCSEG00000019732)
Turbot	MODERN SPECIES	11	b4gat1 (ENSSMAG00000004639)	six7 (ENSSMAG00000004630)	zgc:101810 (ENSSMAG00000004590)	ENSSMAG00000026342	ENSSMAG00000004578	ENSSMAG00000023653	ENSSMAG00000004544	ENSSMAG00000004522	ENSSMAG00000004446	prkd4 (ENSSMAG00000004260)	ENSSMAG00000004202	ENSSMAG00000004134	sf3b2 (ENSSMAG00000004079)	capn1 (ENSSMAG00000004016)	pnp5a (ENSSMAG00000003982)	ENSSMAG00000003945 ##22	ENSSMAG00000003919	ENSSMAG00000022071	ENSSMAG00000022497	ENSSMAG00000003903	ENSSMAG00000003893	ENSSMAG00000030651	vangl2 (ENSSMAG00000003850)	ENSSMAG00000003613	ENSSMAG00000022830	ENSSMAG00000034018	ENSSMAG00000003569	ENSSMAG00000003545	ENSSMAG00000003537	ENSSMAG00000003479	ENSSMAG00000003453
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT01030000235219	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT00990000203863	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.b	ENSGT01030000235161	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.b.a
Zig-zag eel	MODERN SPECIES	9	pfdn2 (ENSMAMG00000014535)	b4gat1 (ENSMAMG00000014519)	six7 (ENSMAMG00000014514)	zgc:101810 (ENSMAMG00000014497)	ENSMAMG00000014447	ENSMAMG00000025456	ENSMAMG00000028192	ENSMAMG00000014394	ENSMAMG00000014306	prkd4 (ENSMAMG00000014218)	ENSMAMG00000014167	ENSMAMG00000014119	sf3b2 (ENSMAMG00000014103)	capn1 (ENSMAMG00000014037)	pnp5a (ENSMAMG00000024803)	ENSMAMG00000027847 ##22	ENSMAMG00000027240	ENSMAMG00000014005	ENSMAMG00000025464	ENSMAMG00000026144	ENSMAMG00000013926	ENSMAMG00000013912	ENSMAMG00000013826	ENSMAMG00000013893	ENSMAMG00000013776	ENSMAMG00000013789	ENSMAMG00000013808	ENSMAMG00000013844	ENSMAMG00000013979	ENSMAMG00000028595	ENSMAMG00000013745
Anabantoidei	ANCESTRAL SPECIES	24	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT01030000235219.a
Siamese fighting fish	MODERN SPECIES	10	pfdn2 (ENSBSLG00000013427)	b4gat1 (ENSBSLG00000013412)	six7 (ENSBSLG00000013396)	zgc:101810 (ENSBSLG00000013360)	ENSBSLG00000013159	GAL3ST3 (ENSBSLG00000012628)	ccs (ENSBSLG00000012608)	rbm14b (ENSBSLG00000012600)	actn3a (ENSBSLG00000010888)	prkd4 (ENSBSLG00000009504)	ENSBSLG00000009355	pacs1a (ENSBSLG00000009006)	sf3b2 (ENSBSLG00000007887)	capn1 (ENSBSLG00000006925)	pnp5a (ENSBSLG00000006552)	KCNJ10 (ENSBSLG00000006457) ##22	ENSBSLG00000006341	ENSBSLG00000005888	ENSBSLG00000005880	ENSBSLG00000005877	ENSBSLG00000005868	ENSBSLG00000005856	ENSBSLG00000005850	ENSBSLG00000005840	ENSBSLG00000005837	ENSBSLG00000005829	ENSBSLG00000005823	ENSBSLG00000005815	ENSBSLG00000005687	ENSBSLG00000005639	ENSBSLG00000005624
Climbing perch	MODERN SPECIES	9	nit1 (ENSATEG00000028512)	pfdn2 (ENSATEG00000002845)	b4gat1 (ENSATEG00000002878)	six7 (ENSATEG00000002891)	zgc:101810 (ENSATEG00000002917)	ENSATEG00000002961	ENSATEG00000029953	ccs (ENSATEG00000002992)	ENSATEG00000003034	actn3b (ENSATEG00000003073)	prkd4 (ENSATEG00000003186)	ENSATEG00000003311	ENSATEG00000003380	capn1 (ENSATEG00000003444)	pnp5a (ENSATEG00000003537)	ENSATEG00000029416 ##22	ENSATEG00000028044	ENSATEG00000029798	ENSATEG00000027123	ENSATEG00000025834	ENSATEG00000003747	ENSATEG00000028345	ENSATEG00000004163	ENSATEG00000003843	ENSATEG00000003893	ENSATEG00000003922	ENSATEG00000003941	ENSATEG00000028505	ENSATEG00000027025	ENSATEG00000025544	ENSATEG00000004008
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT01090000260384	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT01080000257464	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a
Tetraodontidae	ANCESTRAL SPECIES	89	ENSGT00940000153763.b	ENSGT00550000075099	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22
Tetraodon	MODERN SPECIES	26	six7 (ENSTNIG00000003656)	zgc:101810 (ENSTNIG00000003657)	ENSTNIG00000003658	GAL3ST3 (ENSTNIG00000006842)	ccs (ENSTNIG00000006843)	rbm14b (ENSTNIG00000006844)	actn3a (ENSTNIG00000006845)	prkd4 (ENSTNIG00000006846)	ENSTNIG00000006847	ENSTNIG00000000206	ENSTNIG00000000991	pacs1a (ENSTNIG00000007442)	sf3b2 (ENSTNIG00000007441)	capn1 (ENSTNIG00000007440)	pnp5a (ENSTNIG00000007439)	KCNJ10 (ENSTNIG00000007438) ##22	ENSTNIG00000007437	ENSTNIG00000007436	vangl2 (ENSTNIG00000007435)	vangl2 (ENSTNIG00000007434)	ENSTNIG00000007433	ltb4r2a (ENSTNIG00000007432)	ltb4r (ENSTNIG00000007431)	ENSTNIG00000007430	ENSTNIG00000007429	ENSTNIG00000007428	ENSTNIG00000007427	ndrg2 (ENSTNIG00000007426)	ENSTNIG00000007425	ENSTNIG00000007424	ENSTNIG00000007423
Fugu	MODERN SPECIES	20	pfdn2 (ENSTRUG00000004520)	b4gat1 (ENSTRUG00000024415)	six7 (ENSTRUG00000004681)	zgc:101810 (ENSTRUG00000004812)	GAL3ST3 (ENSTRUG00000005535)	ENSTRUG00000033331	GAL3ST3 (ENSTRUG00000030175)	ccs (ENSTRUG00000005597)	rbm14b (ENSTRUG00000005716)	actn3a (ENSTRUG00000005731)	ENSTRUG00000006750	pacs1a (ENSTRUG00000007211)	sf3b2 (ENSTRUG00000007611)	capn1 (ENSTRUG00000008157)	pnp5a (ENSTRUG00000008618)	KCNJ10 (ENSTRUG00000008764) ##22	ENSTRUG00000009011	ENSTRUG00000029328	ENSTRUG00000031779	ENSTRUG00000030157	ENSTRUG00000029417	ENSTRUG00000032122	ENSTRUG00000030364	vangl2 (ENSTRUG00000000640)	ENSTRUG00000000678	MYADM (ENSTRUG00000029959)	MYADM (ENSTRUG00000001626)	ltb4r2a (ENSTRUG00000000913)	ENSTRUG00000023688	ENSTRUG00000027550	ENSTRUG00000001328
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT01090000260384	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT01080000257464	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.b	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.a	ENSGT01090000260384	ENSGT00940000163711.a.a.b	ENSGT00940000162700.e.a.a.b.a.b	ENSGT01060000248671	ENSGT01080000257464	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.b
Eupecaria_C	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.b.g	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.r	ENSGT01090000260051.b.b.ec	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.b.b	ENSGT00940000154311.a.a.a.b.d	ENSGT00940000163520.A.a.a.a.a.a.b	ENSGT00940000164143.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.a.b.g	ENSGT01030000234540.C	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.r	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000164143.b	ENSGT00940000155044.A	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.b.b	ENSGT00940000154311.a.a.a.b.d	ENSGT01090000260411
European seabass	MODERN SPECIES	16	nit1 (ENSDLAG00005032561)	pfdn2 (ENSDLAG00005012707)	b4gat1 (ENSDLAG00005026963)	six7 (ENSDLAG00005012732)	zgc:101810 (ENSDLAG00005012752)	ENSDLAG00005012805	ENSDLAG00005012832	ENSDLAG00005012857	ENSDLAG00005033942	ENSDLAG00005015267	prkd4 (ENSDLAG00005014689)	ENSDLAG00005015144	sf3b2 (ENSDLAG00005017565)	capn1 (ENSDLAG00005017924)	pnp5a (ENSDLAG00005018758)	ENSDLAG00005018771 ##22	ENSDLAG00005027969
Large yellow croaker	MODERN SPECIES	485	pfdn2 (ENSLCRG00005014176)	b4gat1 (ENSLCRG00005014180)	six7 (ENSLCRG00005014183)	zgc:101810 (ENSLCRG00005014185)	ENSLCRG00005014212	GAL3ST3 (ENSLCRG00005014214)	ccs (ENSLCRG00005014215)	rbm14b (ENSLCRG00005014217)	actn3a (ENSLCRG00005014242)	prkd4 (ENSLCRG00005017350)	ENSLCRG00005017380	pacs1a (ENSLCRG00005017421)	sf3b2 (ENSLCRG00005017603)	capn1 (ENSLCRG00005017658)	pnp5a (ENSLCRG00005020720)	KCNJ10 (ENSLCRG00005020721) ##22	ENSLCRG00005020723	ENSLCRG00005020724	ENSLCRG00005020726	ENSLCRG00005020727	ENSLCRG00005020728	ENSLCRG00005020729	ENSLCRG00005020730	ENSLCRG00005020731	ENSLCRG00005020732	vangl2 (ENSLCRG00005020733)	ENSLCRG00005020739	MYADM (ENSLCRG00005020764)	ENSLCRG00005020765	ENSLCRG00005020766	ENSLCRG00005020767
Gilthead seabream	MODERN SPECIES	1	nit1 (ENSSAUG00010011379)	pfdn2 (ENSSAUG00010011378)	b4gat1 (ENSSAUG00010011377)	six7 (ENSSAUG00010011375)	zgc:101810 (ENSSAUG00010011368)	ENSSAUG00010011364	ccs (ENSSAUG00010011360)	rbm14b (ENSSAUG00010011358)	GAL3ST3 (ENSSAUG00010011356)	actn3a (ENSSAUG00010011208)	prkd4 (ENSSAUG00010010308)	ENSSAUG00010010230	sf3b2 (ENSSAUG00010009025)	capn1 (ENSSAUG00010007897)	pacs1a (ENSSAUG00010007625)	KCNJ10 (ENSSAUG00010007619) ##22	ENSSAUG00010007618	ENSSAUG00010007616	ENSSAUG00010007613	ENSSAUG00010007612	ENSSAUG00010007611	ENSSAUG00010007606	ENSSAUG00010007604	ENSSAUG00010007596	ENSSAUG00010007594	ENSSAUG00010007591	ENSSAUG00010007585	ENSSAUG00010007583	ENSSAUG00010007578	ENSSAUG00010007573	ENSSAUG00010007569
Perciformes	ANCESTRAL SPECIES	19	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a.f	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.b	ENSGT01060000248671	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.b	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a
Cottioidei	ANCESTRAL SPECIES	20	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a.f	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT01090000260029.a.a.a.a.a.a.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000155044.A	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.b.b.g.a	ENSGT00940000154311.a.a.a.b.d	ENSGT00940000164143.a.a
Lumpfish	MODERN SPECIES	9	pfdn2 (ENSCLMG00005013449)	b4gat1 (ENSCLMG00005013447)	six7 (ENSCLMG00005013446)	zgc:101810 (ENSCLMG00005013422)	ENSCLMG00005013419	GAL3ST3 (ENSCLMG00005013418)	ccs (ENSCLMG00005013416)	rbm14b (ENSCLMG00005013414)	actn3a (ENSCLMG00005013079)	prkd4 (ENSCLMG00005013076)	ENSCLMG00005012692	pacs1a (ENSCLMG00005012684)	sf3b2 (ENSCLMG00005011758)	capn1 (ENSCLMG00005011508)	pnp5a (ENSCLMG00005011501)	KCNJ10 (ENSCLMG00005011499) ##22	ENSCLMG00005011496	ENSCLMG00005011493	ENSCLMG00005011492	ENSCLMG00005011490	ENSCLMG00005011489	ENSCLMG00005011488	ENSCLMG00005011487	ENSCLMG00005011486	ENSCLMG00005011485	ENSCLMG00005011484	ENSCLMG00005011482	trpc5a (ENSCLMG00005011470)	cnpy3 (ENSCLMG00005011468)	dachb (ENSCLMG00005011466)	ENSCLMG00005011465
Stickleback	MODERN SPECIES	7	nit1 (ENSGACG00000019044)	pfdn2 (ENSGACG00000019042)	b4gat1 (ENSGACG00000019040)	six7 (ENSGACG00000019038)	zgc:101810 (ENSGACG00000019031)	GAL3ST3 (ENSGACG00000019030)	ccs (ENSGACG00000019029)	rbm14b (ENSGACG00000019028)	actn3a (ENSGACG00000019023)	ENSGACG00000019022	ENSGACG00000019021	pacs1a (ENSGACG00000019019)	sf3b2 (ENSGACG00000019012)	capn1 (ENSGACG00000018991)	pnp5a (ENSGACG00000018988)	KCNJ10 (ENSGACG00000018986) ##22	ENSGACG00000018984	vangl2 (ENSGACG00000018982)	ENSGACG00000018980	MYADM (ENSGACG00000018979)	ENSGACG00000018978	ENSGACG00000018977	ENSGACG00000018976	ENSGACG00000018975	ENSGACG00000018974	ENSGACG00000018973	ENSGACG00000018972	ENSGACG00000018971	ENSGACG00000018970	ENSGACG00000018965	ltb4r2a (ENSGACG00000018963)
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00390000009272	ENSGT00940000157679	ENSGT00940000165710	ENSGT00940000165968	ENSGT00940000165459.a.a.a	ENSGT00950000182923.A	ENSGT00940000159785	ENSGT00940000157436.a.f	ENSGT00940000153968.a.b.b.b	ENSGT00950000183024.a.a.a	ENSGT00940000166677	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00940000159147.b.b	ENSGT00950000182991.A.b.b	ENSGT00990000203615.b.a.a.a.a.g.b ##22	ENSGT00940000162700.e.a.a.b.b	ENSGT01060000248671	ENSGT01000000214670	ENSGT00940000172777	ENSGT00390000012496.b.h	ENSGT00940000158350	ENSGT00950000182933.C.j	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a	ENSGT01100000263538.A.a.a.a.j.a.b	ENSGT01100000263538.A.a.a.a.j.b.a	ENSGT01090000260029.a.a.a.a.a.a.a.a	ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.b	ENSGT00950000182966.C.b.b	ENSGT00950000182966.C.a	ENSGT00940000164143.b
Pike perch	MODERN SPECIES	19	pfdn2 (ENSSLUG00000013295)	b4gat1 (ENSSLUG00000013289)	six7 (ENSSLUG00000013280)	zgc:101810 (ENSSLUG00000013269)	ENSSLUG00000013261	GAL3ST3 (ENSSLUG00000013258)	ccs (ENSSLUG00000013255)	rbm14b (ENSSLUG00000013253)	actn3a (ENSSLUG00000006804)	prkd4 (ENSSLUG00000006448)	ENSSLUG00000006413	pacs1a (ENSSLUG00000006117)	sf3b2 (ENSSLUG00000005688)	capn1 (ENSSLUG00000002854)	pnp5a (ENSSLUG00000002729)	KCNJ10 (ENSSLUG00000002718) ##22	ENSSLUG00000002714	ENSSLUG00000002709	ENSSLUG00000002706	ENSSLUG00000002701	ENSSLUG00000002697	ENSSLUG00000002687	ENSSLUG00000002683	ENSSLUG00000002681	ENSSLUG00000002680	ENSSLUG00000002675	vangl2 (ENSSLUG00000002668)	ENSSLUG00000002512	MYADM (ENSSLUG00000002469)	ENSSLUG00000002461	ENSSLUG00000002455
Channel bull blenny	MODERN SPECIES	9	pfdn2 (ENSCGOG00000017139)	b4gat1 (ENSCGOG00000017150)	six7 (ENSCGOG00000017151)	zgc:101810 (ENSCGOG00000017156)	ENSCGOG00000017265	GAL3ST3 (ENSCGOG00000017275)	CCS (ENSCGOG00000017281)	ENSCGOG00000017302	CCS (ENSCGOG00000017304)	rbm14b (ENSCGOG00000017305)	actn3a (ENSCGOG00000017330)	prkd4 (ENSCGOG00000018717)	sf3b2 (ENSCGOG00000018731)	capn1 (ENSCGOG00000018983)	pnp5a (ENSCGOG00000019900)	KCNJ10 (ENSCGOG00000019904) ##22	ENSCGOG00000019905	ENSCGOG00000019912	ENSCGOG00000019914	ENSCGOG00000019916	ENSCGOG00000019919	ENSCGOG00000019920	ENSCGOG00000019922	vangl2 (ENSCGOG00000019923)	ENSCGOG00000019950	MYADM (ENSCGOG00000020071)	ENSCGOG00000020074	ENSCGOG00000020078	ENSCGOG00000020079	ENSCGOG00000020083	ENSCGOG00000020086
Ballan wrasse	MODERN SPECIES	144	pfdn2 (ENSLBEG00000028004)	b4gat1 (ENSLBEG00000027994)	six7 (ENSLBEG00000027988)	zgc:101810 (ENSLBEG00000027977)	ENSLBEG00000027965	GAL3ST3 (ENSLBEG00000027959)	ccs (ENSLBEG00000027942)	rbm14b (ENSLBEG00000027934)	actn3a (ENSLBEG00000027897)	prkd4 (ENSLBEG00000027849)	ENSLBEG00000027828	pacs1a (ENSLBEG00000027801)	sf3b2 (ENSLBEG00000027739)	capn1 (ENSLBEG00000027694)	pnp5a (ENSLBEG00000027667)	KCNJ10 (ENSLBEG00000027655) ##22	ENSLBEG00000027622
Pinecone sodierfish	MODERN SPECIES	9	pfdn2 (ENSMMDG00005008598)	b4gat1 (ENSMMDG00005008595)	six7 (ENSMMDG00005008594)	zgc:101810 (ENSMMDG00005008591)	ENSMMDG00005008588	GAL3ST3 (ENSMMDG00005008586)	ccs (ENSMMDG00005008530)	rbm14b (ENSMMDG00005008524)	actn3a (ENSMMDG00005008518)	prkd4 (ENSMMDG00005005020)	ENSMMDG00005004965	pacs1a (ENSMMDG00005004939)	sf3b2 (ENSMMDG00005003189)	capn1 (ENSMMDG00005003116)	pnp5a (ENSMMDG00005003098)	KCNJ10 (ENSMMDG00005003082) ##22	ENSMMDG00005003074	ENSMMDG00005003065	ENSMMDG00005003056	ENSMMDG00005003049	vangl2 (ENSMMDG00005003042)	ENSMMDG00005002971	MYADM (ENSMMDG00005002951)	ENSMMDG00005002945	ENSMMDG00005002939	ENSMMDG00005002934	ENSMMDG00005002932	ENSMMDG00005002920	ltb4r2a (ENSMMDG00005002860)	ltb4r (ENSMMDG00005002725)	ENSMMDG00005002692
Clupeocephala	ANCESTRAL SPECIES	803															ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22
Euteleosteomorpha	ANCESTRAL SPECIES	594															ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b	ENSGT00940000163239	ENSGT00940000154801.o.a
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b	ENSGT00940000177440	ENSGT00940000163239
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Carangaria	ANCESTRAL SPECIES	5	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000176960	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b
Tongue sole	MODERN SPECIES	12	dnaaf11 (ENSCSEG00000007000)	KCNQ3 (ENSCSEG00000006974)	ENSCSEG00000006969	ENSCSEG00000006955	cldn15la (ENSCSEG00000006915)	saga (ENSCSEG00000006746)	ENSCSEG00000006730	ENSCSEG00000006725	ENSCSEG00000006713	DUSP28 (ENSCSEG00000006706)	ENSCSEG00000006696	VCPIP1 (ENSCSEG00000006691)	fam49ba (ENSCSEG00000006682)	ptmab (ENSCSEG00000006674)	ENSCSEG00000006670	KCNJ10 (ENSCSEG00000006610) ##22	ENSCSEG00000006584	arhgap12a (ENSCSEG00000006471)	ENSCSEG00000006456	KIF5B (ENSCSEG00000006440)	ENSCSEG00000006418	ENSCSEG00000006380	ENSCSEG00000006366	pold3 (ENSCSEG00000021727)	ENSCSEG00000021700	ZEB1 (ENSCSEG00000021695)	ENSCSEG00000021689	ENSCSEG00000021683	SVIL (ENSCSEG00000021682)	ENSCSEG00000021681	ENSCSEG00000021680
Turbot	MODERN SPECIES	19	ENSSMAG00000010262	ENSSMAG00000010172	ENSSMAG00000010143	ENSSMAG00000010125	ENSSMAG00000010083	ENSSMAG00000010061	ENSSMAG00000010048	ENSSMAG00000037269	ENSSMAG00000009609	ENSSMAG00000009889	ENSSMAG00000034051	ENSSMAG00000009685	ENSSMAG00000035840	ENSSMAG00000031705	ENSSMAG00000009576	ENSSMAG00000035014 ##22	ENSSMAG00000028486	ENSSMAG00000027893	ENSSMAG00000009538	kirrel1b (ENSSMAG00000009515)	cadm3 (ENSSMAG00000009450)	sdhc (ENSSMAG00000023076)	ENSSMAG00000009428	atp1a2a (ENSSMAG00000009388)	mpz (ENSSMAG00000009360)	lig1 (ENSSMAG00000009327)	ENSSMAG00000026302	ENSSMAG00000033170	dnaaf6 (ENSSMAG00000009284)	ENSSMAG00000009260	ENSSMAG00000009225
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Seriola	ANCESTRAL SPECIES	45	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT00940000165396.A.b	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT00940000164868.C.d	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01010000222685
Yellowtail amberjack	MODERN SPECIES	3075	ltb4r2b (ENSSLDG00000007844)	NFATC4 (ENSSLDG00000007946)	MYADM (ENSSLDG00000007992)	pex19 (ENSSLDG00000008011)	copa (ENSSLDG00000008062)	NCSTN (ENSSLDG00000008204)	VANGL2 (ENSSLDG00000008246)	ENSSLDG00000008280	ENSSLDG00000008296	tesk2 (ENSSLDG00000008317)	ENSSLDG00000008365	ENSSLDG00000008377	ENSSLDG00000008384	ENSSLDG00000008393	ENSSLDG00000008410	KCNJ10 (ENSSLDG00000008436) ##22	ENSSLDG00000008452	ENSSLDG00000008482	ENSSLDG00000008500	ENSSLDG00000008523	ctsk (ENSSLDG00000009094)	ENSSLDG00000012071
Greater amberjack	MODERN SPECIES	99	ltb4r2b (ENSSDUG00000006318)	NFATC4 (ENSSDUG00000006277)	MYADM (ENSSDUG00000006255)	pex19 (ENSSDUG00000006233)	copa (ENSSDUG00000006110)	NCSTN (ENSSDUG00000006032)	VANGL2 (ENSSDUG00000006009)	ENSSDUG00000005983	tesk2 (ENSSDUG00000005961)	ENSSDUG00000005947	ENSSDUG00000005920	ENSSDUG00000005915	ENSSDUG00000005904	ENSSDUG00000005897	ENSSDUG00000005889	KCNJ10 (ENSSDUG00000005868) ##22	ENSSDUG00000005850	ENSSDUG00000005837	ENSSDUG00000005825
Barramundi perch	MODERN SPECIES	74	pex19 (ENSLCAG00010000769)	copa (ENSLCAG00010000829)	NCSTN (ENSLCAG00010000954)	VANGL2 (ENSLCAG00010001103)	ENSLCAG00010001106	ENSLCAG00010001111	ENSLCAG00010001119	tesk2 (ENSLCAG00010001128)	ENSLCAG00010001139	ENSLCAG00010001150	ENSLCAG00010001159	ENSLCAG00010001170	ENSLCAG00010001174	ENSLCAG00010001178	ENSLCAG00010001181	KCNJ10 (ENSLCAG00010001182) ##22	ENSLCAG00010001186	ENSLCAG00010001195	ENSLCAG00010001201	ENSLCAG00010001270	kirrel1b (ENSLCAG00010001485)	cadm3 (ENSLCAG00010001501)	sdhc (ENSLCAG00010001506)	atp1a2a (ENSLCAG00010001574)	mpz (ENSLCAG00010002218)	lig1 (ENSLCAG00010002307)	ENSLCAG00010002689	PIP4P1 (ENSLCAG00010002693)	dnaaf6 (ENSLCAG00010002697)	ENSLCAG00010002702	eif3f (ENSLCAG00010002705)
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01030000234576.D.a.a.b.a.a.a.a.b	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01010000222685	ENSGT01030000234540.A.a.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Zig-zag eel	MODERN SPECIES	8	ltb4r2b (ENSMAMG00000026521)	ENSMAMG00000008379	ENSMAMG00000008398	ENSMAMG00000025273	ENSMAMG00000008430	ENSMAMG00000008544	ENSMAMG00000008580	ENSMAMG00000008612	ENSMAMG00000008622	ENSMAMG00000027948	ENSMAMG00000008645	ENSMAMG00000008677	ENSMAMG00000024735	ENSMAMG00000024605	ENSMAMG00000008735	ENSMAMG00000008743 ##22	ENSMAMG00000025500	ENSMAMG00000026615	ENSMAMG00000028224	ENSMAMG00000024750	ENSMAMG00000026006	ENSMAMG00000025861	ENSMAMG00000028065	ENSMAMG00000008799	ENSMAMG00000008839	ENSMAMG00000028342	ENSMAMG00000026099	ENSMAMG00000028017	kirrel1b (ENSMAMG00000008854)	cadm3 (ENSMAMG00000024760)	sdhc (ENSMAMG00000008930)
Anabantoidei	ANCESTRAL SPECIES	27	ENSGT00940000159760	ENSGT00940000158506	ENSGT01100000263533.b.b.a.a.a.a.a.b	ENSGT01100000263491.b	ENSGT00390000011144	ENSGT00390000006307	ENSGT00950000182910.a.b.a	ENSGT00940000156056.B.c.a	ENSGT00940000156387	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.b.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00980000202098	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b	ENSGT01010000222336.a.a.a.a.a.b.a.b
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000023632	ENSBSLG00000023633	ENSBSLG00000023644	ENSBSLG00000023645	ENSBSLG00000023653	tmie (ENSBSLG00000023661)	pth1r (ENSBSLG00000023679)	myl13 (ENSBSLG00000023835)	CRHR2 (ENSBSLG00000023968)	aqp1a.1 (ENSBSLG00000024418)	thoc1 (ENSBSLG00000024487)	usp14 (ENSBSLG00000024713)	rock1 (ENSBSLG00000025119)	ENSBSLG00000025250	pnp5b (ENSBSLG00000025252)	KCNJ10 (ENSBSLG00000025254) ##22	ENSBSLG00000025256	ENSBSLG00000025260	ENSBSLG00000025261	ENSBSLG00000025263	ENSBSLG00000004923	ENSBSLG00000005596	ENSBSLG00000005659	ENSBSLG00000005685	ENSBSLG00000005694	ENSBSLG00000005742	kirrel1b (ENSBSLG00000006766)	cadm3 (ENSBSLG00000007779)	sdhc (ENSBSLG00000007903)	atp1a2a (ENSBSLG00000008493)	mpz (ENSBSLG00000016448)
Climbing perch	MODERN SPECIES	8	ENSATEG00000014586	KCNQ3 (ENSATEG00000014606)	dnaaf11 (ENSATEG00000014639)	ENSATEG00000014666	tmem71 (ENSATEG00000014810)	ift57 (ENSATEG00000014831)	cavin4a (ENSATEG00000026765)	ENSATEG00000014887	slc39a6 (ENSATEG00000014926)	ENSATEG00000014951	ENSATEG00000014968	ENSATEG00000014981	ENSATEG00000014684	ENSATEG00000026899	ENSATEG00000015010	ENSATEG00000015037 ##22	ENSATEG00000026694	ENSATEG00000015151	ENSATEG00000015119	ENSATEG00000015166	kirrel1b (ENSATEG00000015184)	cadm3 (ENSATEG00000015232)	sdhc (ENSATEG00000015268)	atp1a2a (ENSATEG00000015436)	mpz (ENSATEG00000029547)	lig1 (ENSATEG00000015524)	ENSATEG00000015537	ENSATEG00000015551	ENSATEG00000015585	ENSATEG00000015621	ENSATEG00000015635 ##18
Eupercaria	ANCESTRAL SPECIES	24	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000176960	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Tetraodontidae	ANCESTRAL SPECIES	325																ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000155795.e
Fugu	MODERN SPECIES	14	CSNK1G2 (ENSTRUG00000004935)	mrpl37 (ENSTRUG00000004786)	ACOT11 (ENSTRUG00000004460)	ENSTRUG00000026300	ENSTRUG00000029715	ENSTRUG00000030372	ENSTRUG00000030217	dusp12 (ENSTRUG00000004164)	ENSTRUG00000022667	ENSTRUG00000023760	ENSTRUG00000031670	ENSTRUG00000033080	ENSTRUG00000028695	ENSTRUG00000030971	ENSTRUG00000027008	KCNJ10 (ENSTRUG00000001706) ##22	ENSTRUG00000026098	ENSTRUG00000028263	ENSTRUG00000031442	kirrel1b (ENSTRUG00000001963)	ENSTRUG00000028896	ENSTRUG00000009544	ENSTRUG00000026398	ENSTRUG00000032144	ENSTRUG00000033093	ENSTRUG00000029144	ENSTRUG00000033073	ENSTRUG00000025981	ENSTRUG00000028005	ENSTRUG00000009732	ENSTRUG00000023555
Tetraodon	MODERN SPECIES	26	GMEB2 (ENSTNIG00000002528)	uxt (ENSTNIG00000002529)	ELK1 (ENSTNIG00000002530)	lamb2 (ENSTNIG00000002532)	ENSTNIG00000003188	ENSTNIG00000002533	reep3b (ENSTNIG00000003517)	rab3gap1 (ENSTNIG00000005890)	ccdc57 (ENSTNIG00000005891)	slc16a3b (ENSTNIG00000003785)	tfam (ENSTNIG00000003786)	ipmkb (ENSTNIG00000003787)	ENSTNIG00000006081	ENSTNIG00000000216	ca10a (ENSTNIG00000006082)	KCNJ10 (ENSTNIG00000006226) ##22	tppp2 (ENSTNIG00000006227)	ENSTNIG00000006228	ENSTNIG00000003230	rhot1b (ENSTNIG00000003231)	ENSTNIG00000003232	tefm (ENSTNIG00000003233)	suz12b (ENSTNIG00000003234)	utp6 (ENSTNIG00000003235)	rab11fip4b (ENSTNIG00000003236)	ENSTNIG00000001660	ENSTNIG00000004178	ENSTNIG00000004177	znf207b (ENSTNIG00000003722)	rhbdl3 (ENSTNIG00000003721)	vegfc (ENSTNIG00000003882)
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000176960	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	418	NFATC4 (ENSLBEG00000004588)	MYADM (ENSLBEG00000004568)	pex19 (ENSLBEG00000004557)	copa (ENSLBEG00000004473)	NCSTN (ENSLBEG00000004425)	VANGL2 (ENSLBEG00000004381)	ENSLBEG00000004350	ENSLBEG00000004319	ENSLBEG00000004306	tesk2 (ENSLBEG00000004269)	ENSLBEG00000004241	ENSLBEG00000004223	ENSLBEG00000004201	ENSLBEG00000004180	ENSLBEG00000004139	KCNJ10 (ENSLBEG00000004107) ##22	ENSLBEG00000004086
Ballan wrasse	MODERN SPECIES	4796																KCNJ10 (ENSLBEG00000008030) ##22
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000176960	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Eupecaria_C	ANCESTRAL SPECIES	26	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01010000222685	ENSGT01030000234540.A.a.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b
Gilthead seabream	MODERN SPECIES	13	NFATC4 (ENSSAUG00010015004)	MYADM (ENSSAUG00010015002)	pex19 (ENSSAUG00010014999)	copa (ENSSAUG00010014431)	NCSTN (ENSSAUG00010011028)	VANGL2 (ENSSAUG00010010990)	ENSSAUG00010010988	ENSSAUG00010010983	ENSSAUG00010010981	tesk2 (ENSSAUG00010010977)	ENSSAUG00010010975	ENSSAUG00010010974	ENSSAUG00010010973	ENSSAUG00010010972	pnp5b (ENSSAUG00010010968)	KCNJ10 (ENSSAUG00010010965) ##22	ENSSAUG00010010963	ENSSAUG00010010961	ENSSAUG00010010958	ENSSAUG00010010957	ENSSAUG00010010956	ENSSAUG00010010955	kirrel1b (ENSSAUG00010009017)	cadm3 (ENSSAUG00010008993)	SDHC (ENSSAUG00010008991)	atp1a2a (ENSSAUG00010007626)	mpz (ENSSAUG00010007608)	lig1 (ENSSAUG00010007574)	ENSSAUG00010007522	PIP4P1 (ENSSAUG00010007517)	dnaaf6 (ENSSAUG00010007515)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	30	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000176960	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Large yellow croaker	MODERN SPECIES	1	ENSLCRG00005007584	sdr39u1 (ENSLCRG00005007581)	ltb4r2b (ENSLCRG00005007580)	ENSLCRG00005007576	MYADM (ENSLCRG00005007573)	pex19 (ENSLCRG00005007570)	copa (ENSLCRG00005003808)	NCSTN (ENSLCRG00005006224)	VANGL2 (ENSLCRG00005003763)	ENSLCRG00005003759	ENSLCRG00005003758	tesk2 (ENSLCRG00005003757)	ENSLCRG00005003755	ENSLCRG00005003752	ENSLCRG00005003744	KCNJ10 (ENSLCRG00005003743) ##22	ENSLCRG00005003742	ENSLCRG00005003728	ENSLCRG00005003725	ENSLCRG00005003722	ENSLCRG00005003719	ENSLCRG00005003716	ENSLCRG00005003713	kirrel1b (ENSLCRG00005002327)	cadm3 (ENSLCRG00005002311)	sdhc (ENSLCRG00005002308)	atp1a2a (ENSLCRG00005002072)	mpz (ENSLCRG00005002012)	lig1 (ENSLCRG00005001631)	ENSLCRG00005001554	PIP4P1 (ENSLCRG00005001484)
European seabass	MODERN SPECIES		ltb4r2b (ENSDLAG00005003304)	ENSDLAG00005003381	ENSDLAG00005032072	ENSDLAG00005003458	ENSDLAG00005003560	ENSDLAG00005004669	ENSDLAG00005033199	ENSDLAG00005005472	ENSDLAG00005005481	ENSDLAG00005030495	ENSDLAG00005005496	ENSDLAG00005005533	ENSDLAG00005005563	ENSDLAG00005028631	ENSDLAG00005005597	ENSDLAG00005005612 ##22	ENSDLAG00005034895	ENSDLAG00005034674	ENSDLAG00005030729	ENSDLAG00005005623	kirrel1b (ENSDLAG00005005673)	cadm3 (ENSDLAG00005033644)	SDHC (ENSDLAG00005006491)	atp1a2a (ENSDLAG00005006548)	mpz (ENSDLAG00005027465)	lig1 (ENSDLAG00005007329)	ENSDLAG00005008805	ENSDLAG00005026490	ENSDLAG00005031915	dnaaf6 (ENSDLAG00005008905)	ENSDLAG00005008912
Perciformes	ANCESTRAL SPECIES	5	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01030000234576.D.a.a.b.a.a.a.a.b	ENSGT00950000182774.b.a.b.a.b.a.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b	ENSGT00940000154653
Cottioidei	ANCESTRAL SPECIES	22	ENSGT00940000164586.h	ENSGT00390000017614.e.b	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000165396.B	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000155795.e	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000154653	ENSGT01010000222336.a.a.a.a.a.a	ENSGT00950000183208.B.f.b	ENSGT00940000160228.i.b
Lumpfish	MODERN SPECIES	8	ENSCLMG00005013230	pex19 (ENSCLMG00005013234)	copa (ENSCLMG00005013251)	NCSTN (ENSCLMG00005013297)	VANGL2 (ENSCLMG00005014276)	ENSCLMG00005014278	ENSCLMG00005014279	ENSCLMG00005014280	tesk2 (ENSCLMG00005014283)	si:ch211-155e24.3 (ENSCLMG00005014442)	ENSCLMG00005014444	ENSCLMG00005014445	ENSCLMG00005014447	ENSCLMG00005014448	ENSCLMG00005014449	KCNJ10 (ENSCLMG00005014451) ##22	ENSCLMG00005014453	ENSCLMG00005014454	KIRREL1 (ENSCLMG00005014458)	KCNJ9 (ENSCLMG00005014460) ##18	eif3f (ENSCLMG00005014462)	ENSCLMG00005014506	dnaaf6 (ENSCLMG00005014507)	PIP4P1 (ENSCLMG00005014508)	ENSCLMG00005014511	lig1 (ENSCLMG00005014513)	cadm3 (ENSCLMG00005014514)	SVIL (ENSCLMG00005014519)	ENSCLMG00005015559	ENSCLMG00005015567	ENSCLMG00005015569
Stickleback	MODERN SPECIES	2	apol1 (ENSGACG00000017779)	ENSGACG00000017778	ENSGACG00000017777	hnrnpc (ENSGACG00000017772)	ENSGACG00000017770	pex19 (ENSGACG00000017762)	copa (ENSGACG00000017751)	NCSTN (ENSGACG00000017738)	VANGL2 (ENSGACG00000017730)	ENSGACG00000017724	tesk2 (ENSGACG00000017719)	ENSGACG00000017718	ENSGACG00000017716	ENSGACG00000017713	ENSGACG00000017710	KCNJ10 (ENSGACG00000017705) ##22	ENSGACG00000017703	ENSGACG00000017701	ENSGACG00000017700	kirrel1b (ENSGACG00000017696)	ENSGACG00000017693	ENSGACG00000017688	sdhc (ENSGACG00000017685)	atp1a2a (ENSGACG00000017683)	mpz (ENSGACG00000017682)	lig1 (ENSGACG00000017679)	PIP4P1 (ENSGACG00000017675)	ENSGACG00000017674	dnaaf6 (ENSGACG00000017672)	eif3f (ENSGACG00000017667)	KCNJ9 (ENSGACG00000017665) ##18
Perciformes_a	ANCESTRAL SPECIES	17	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT01100000263505.a	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT00950000182774.b.a.b.a.b.a.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT01010000222685	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Channel bull blenny	MODERN SPECIES	8	sdr39u1 (ENSCGOG00000024598)	ltb4r2b (ENSCGOG00000024597)	MYADM (ENSCGOG00000024596)	pex19 (ENSCGOG00000024595)	copa (ENSCGOG00000024549)	NCSTN (ENSCGOG00000024502)	VANGL2 (ENSCGOG00000024489)	ENSCGOG00000024488	ENSCGOG00000024486	ENSCGOG00000024484	tesk2 (ENSCGOG00000024480)	ENSCGOG00000024479	ENSCGOG00000024478	ENSCGOG00000024473	pnp5b (ENSCGOG00000024472)	KCNJ10 (ENSCGOG00000024471) ##22	ENSCGOG00000024470	ENSCGOG00000024469	kirrel1b (ENSCGOG00000024439)	cadm3 (ENSCGOG00000024430)	sdhc (ENSCGOG00000024427)	ENSCGOG00000024425	atp1a2a (ENSCGOG00000021903)	mpz (ENSCGOG00000021664)	lig1 (ENSCGOG00000021149)	ENSCGOG00000021113	ENSCGOG00000021111	SVIL (ENSCGOG00000020676)	ENSCGOG00000020655	ENSCGOG00000020654	ENSCGOG00000020643
Pike perch	MODERN SPECIES	144	ENSSLUG00000019249	MYADM (ENSSLUG00000019257)	pex19 (ENSSLUG00000019260)	copa (ENSSLUG00000019279)	NCSTN (ENSSLUG00000019384)	VANGL2 (ENSSLUG00000020604)	ENSSLUG00000020606	ENSSLUG00000020608	ENSSLUG00000020609	ENSSLUG00000020612	ENSSLUG00000020613	tesk2 (ENSSLUG00000020621)	ENSSLUG00000020669	ENSSLUG00000020671	ENSSLUG00000020676	KCNJ10 (ENSSLUG00000020679) ##22	ENSSLUG00000020683	ENSSLUG00000020691	ENSSLUG00000020693	ENSSLUG00000020695	ENSSLUG00000020698	ENSSLUG00000020711	ENSSLUG00000020718	ENSSLUG00000020721	ENSSLUG00000020725	ENSSLUG00000020727	ENSSLUG00000020728
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT00990000204129	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Pomacentridae	ANCESTRAL SPECIES	46	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263520.a.a.a.a.a	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Pomacentridae_A	ANCESTRAL SPECIES	63	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936.e	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Amphiprion	ANCESTRAL SPECIES	188													ENSGT00940000165396.B	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936.e	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Orange clownfish	MODERN SPECIES	1	hnrnpc (ENSAPEG00000019962)	ENSAPEG00000019930	CNTNAP2 (ENSAPEG00000019871)	ccr12a (ENSAPEG00000019860)	xkr4 (ENSAPEG00000019846)	ENSAPEG00000019828	ENSAPEG00000019814	tmem68 (ENSAPEG00000019805)	ENSAPEG00000019723	ENSAPEG00000019703	ENSAPEG00000019672	ENSAPEG00000019653	ENSAPEG00000019645	ENSAPEG00000019627	ENSAPEG00000019590	KCNJ10 (ENSAPEG00000019579) ##22	ENSAPEG00000019543	ENSAPEG00000019525	kirrel1b (ENSAPEG00000019479)	cadm3 (ENSAPEG00000019452)	sdhc (ENSAPEG00000019420)	ENSAPEG00000019410	atp1a2a (ENSAPEG00000019376)	mpz (ENSAPEG00000019357)	lig1 (ENSAPEG00000019333)	ENSAPEG00000019280	PIP4P1 (ENSAPEG00000019242)	dnaaf6 (ENSAPEG00000019198)	ENSAPEG00000019133	eif3f (ENSAPEG00000019096)	KCNJ9 (ENSAPEG00000019063) ##18
Clown anemonefish	MODERN SPECIES	3631						ENSAOCG00000000391	ENSAOCG00000007313	npr3 (ENSAOCG00000007348)	ENSAOCG00000007354	ENSAOCG00000007424	golph3a (ENSAOCG00000002624)	ENSAOCG00000007468	ENSAOCG00000000406	ENSAOCG00000007502	ENSAOCG00000007537	KCNJ10 (ENSAOCG00000007561) ##22	ENSAOCG00000007580	ENSAOCG00000007607	KIRREL1 (ENSAOCG00000007659)
Spiny chromis	MODERN SPECIES	3099																KCNJ10 (ENSAPOG00000010593) ##22
Bicolor damselfish	MODERN SPECIES	2463															ENSSPAG00000008913	KCNJ10 (ENSSPAG00000008949) ##22	ENSSPAG00000009016	ENSSPAG00000009024
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129	ENSGT01030000234540.A.a.a	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00950000182933.C.i.f.b	ENSGT00950000182933.C.i.e	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000203939.A	ENSGT01030000234540.A.a.a	ENSGT00990000204129.e	ENSGT00960000186782.B	ENSGT01050000246120	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a	ENSGT01030000234576.D.a.a.b.a.a.a.a.b	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129.f	ENSGT01030000234540.A.a.a	ENSGT00990000204129.e	ENSGT00960000186782.B	ENSGT00960000186782.A	ENSGT00990000203939.D	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00950000182933.C.i.f.b	ENSGT00950000182933.C.i.e	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000204129.f	ENSGT00960000186782.D	ENSGT00960000186782.C	ENSGT00990000204129.e	ENSGT00960000186782.B	ENSGT00960000186782.A	ENSGT00990000203939.D	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A
Burton s mouthbrooder	MODERN SPECIES	291	MYADM (ENSHBUG00000000194)	MYADM (ENSHBUG00000007498)	pex19 (ENSHBUG00000007510)	copa (ENSHBUG00000007578)	NCSTN (ENSHBUG00000007596)	VANGL2 (ENSHBUG00000007617)	ENSHBUG00000007624	ENSHBUG00000007633	tesk2 (ENSHBUG00000007669)	ENSHBUG00000007677	ENSHBUG00000007686	ENSHBUG00000007700	ENSHBUG00000007721	ENSHBUG00000007730	pnp5b (ENSHBUG00000007743)	KCNJ10 (ENSHBUG00000007794) ##22	ENSHBUG00000007823	ENSHBUG00000007832	ENSHBUG00000007848	ENSHBUG00000007863	ENSHBUG00000007876	ENSHBUG00000007890	kirrel1b (ENSHBUG00000007979)	cadm3 (ENSHBUG00000007996)	sdhc (ENSHBUG00000008013)	atp1a2a (ENSHBUG00000008041)	mpz (ENSHBUG00000008072)	lig1 (ENSHBUG00000008096)	ENSHBUG00000008146	PIP4P1 (ENSHBUG00000008177)	dnaaf6 (ENSHBUG00000008223)
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00950000182933.C.i.f.b	ENSGT00950000182933.C.i.e	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01030000234576.D.a.a.b.a.a.a.a.b	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000203939.A.a.a	ENSGT00990000204129.f	ENSGT00960000186782.D	ENSGT00960000186782.C	ENSGT00990000204129.e	ENSGT00960000186782.B	ENSGT00960000186782.A	ENSGT00990000203939.D	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00940000160923	ENSGT00950000182933.C.i.f.a	ENSGT00950000182933.C.i.f.b	ENSGT00950000182933.C.i.e	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00990000203939.A.a.a	ENSGT00990000204129.f	ENSGT00960000186782.D	ENSGT00960000186782.C	ENSGT00990000204129.e	ENSGT00960000186782.B	ENSGT00960000186782.A	ENSGT00990000203939.D	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000177717	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783
Eastern happy	MODERN SPECIES	9	MYADM (ENSACLG00000005274)	MYADM (ENSACLG00000004971)	pex19 (ENSACLG00000004954)	copa (ENSACLG00000004865)	NCSTN (ENSACLG00000004838)	VANGL2 (ENSACLG00000004803)	ENSACLG00000004785	ENSACLG00000004749	tesk2 (ENSACLG00000004697)	ENSACLG00000004663	ENSACLG00000004653	ENSACLG00000004626	ENSACLG00000004599	ENSACLG00000004584	pnp5b (ENSACLG00000004552)	KCNJ10 (ENSACLG00000004501) ##22	ENSACLG00000004455	ENSACLG00000004267	ENSACLG00000004251	ENSACLG00000004229	ENSACLG00000004214	ENSACLG00000004201	ENSACLG00000004187	ENSACLG00000004170	ENSACLG00000004161	kirrel1b (ENSACLG00000004102)	cadm3 (ENSACLG00000004047)	sdhc (ENSACLG00000004035)	ENSACLG00000004026	atp1a2a (ENSACLG00000003985)	mpz (ENSACLG00000003936)
Zebra mbuna	MODERN SPECIES	1100	MYADM (ENSMZEG00005024173)	MYADM (ENSMZEG00005024172)	MYADM (ENSMZEG00005024170)	pex19 (ENSMZEG00005024168)	copa (ENSMZEG00005024158)	NCSTN (ENSMZEG00005024154)	VANGL2 (ENSMZEG00005024151)	ENSMZEG00005024149	ENSMZEG00005024147	tesk2 (ENSMZEG00005024143)	si:ch211-155e24.3 (ENSMZEG00005024140)	ENSMZEG00005024139	ENSMZEG00005024138	ENSMZEG00005024136	ENSMZEG00005024134	KCNJ10 (ENSMZEG00005024132) ##22	ENSMZEG00005024130	ENSMZEG00005024129	ENSMZEG00005024128	ENSMZEG00005024126	ENSMZEG00005024125	ENSMZEG00005024123	ENSMZEG00005024122	ENSMZEG00005024121	ENSMZEG00005024120	ENSMZEG00005024118	kirrel1b (ENSMZEG00005024113)	cadm3 (ENSMZEG00005024109)	sdhc (ENSMZEG00005024106)	ENSMZEG00005024103	atp1a2a (ENSMZEG00005024097)
P. nyererei	MODERN SPECIES	326	MYADM (ENSPNYG00000003033)	MYADM (ENSPNYG00000003020)	pex19 (ENSPNYG00000003013)	copa (ENSPNYG00000002912)	NCSTN (ENSPNYG00000002863)	VANGL2 (ENSPNYG00000002826)	ENSPNYG00000002817	ENSPNYG00000002801	ENSPNYG00000002792	tesk2 (ENSPNYG00000002774)	ENSPNYG00000002759	ENSPNYG00000002753	ENSPNYG00000002741	ENSPNYG00000002699	pnp5b (ENSPNYG00000002678)	KCNJ10 (ENSPNYG00000002654) ##22	ENSPNYG00000002642	ENSPNYG00000002597	ENSPNYG00000002569	ENSPNYG00000002537	ENSPNYG00000002513	ENSPNYG00000002476	ENSPNYG00000002435	ENSPNYG00000002406	ENSPNYG00000002392	ENSPNYG00000002375	ENSPNYG00000002319	kirrel1b (ENSPNYG00000002262)	cadm3 (ENSPNYG00000002205)	sdhc (ENSPNYG00000002194)	atp1a2a (ENSPNYG00000002116)
Lyretail cichlid	MODERN SPECIES	313	ENSNBRG00000016207	MYADM (ENSNBRG00000016226)	pex19 (ENSNBRG00000016240)	MYADM (ENSNBRG00000016259)	copa (ENSNBRG00000016300)	NCSTN (ENSNBRG00000016410)	VANGL2 (ENSNBRG00000016443)	ENSNBRG00000016463	ENSNBRG00000016477	tesk2 (ENSNBRG00000016488)	ENSNBRG00000016514	ENSNBRG00000016526	ENSNBRG00000016532	ENSNBRG00000016571	pnp5b (ENSNBRG00000016699)	KCNJ10 (ENSNBRG00000016722) ##22	ENSNBRG00000016820	ENSNBRG00000016858	ENSNBRG00000016872	ENSNBRG00000016889	ENSNBRG00000016904	ENSNBRG00000016925	kirrel1b (ENSNBRG00000016949)	cadm3 (ENSNBRG00000017073)	sdhc (ENSNBRG00000017235)	atp1a2a (ENSNBRG00000017270)	mpz (ENSNBRG00000017351)	lig1 (ENSNBRG00000017375)	ENSNBRG00000017409	PIP4P1 (ENSNBRG00000017419)	ENSNBRG00000017439
Nile tilapia	MODERN SPECIES	9	ENSONIG00000032915	MYADM (ENSONIG00000038598)	MYADM (ENSONIG00000020989)	pex19 (ENSONIG00000015183)	copa (ENSONIG00000015174)	NCSTN (ENSONIG00000015170)	VANGL2 (ENSONIG00000033892)	ENSONIG00000015162	ENSONIG00000039259	tesk2 (ENSONIG00000015160)	ENSONIG00000028540	ENSONIG00000034843	ENSONIG00000035876	ENSONIG00000041892	pnp5b (ENSONIG00000015154)	KCNJ10 (ENSONIG00000015152) ##22	ENSONIG00000042053	ENSONIG00000037856	ENSONIG00000037997	ENSONIG00000015150	ENSONIG00000037502	ENSONIG00000037007	ENSONIG00000015151	ENSONIG00000027848	ENSONIG00000015149	ENSONIG00000032132	ENSONIG00000031912	kirrel1b (ENSONIG00000015138)	cadm3 (ENSONIG00000015137)	sdhc (ENSONIG00000031393)	atp1a2a (ENSONIG00000015107)
Midas cichlid	MODERN SPECIES	772	ENSACIG00000012754	sdr39u1 (ENSACIG00000012791)	ENSACIG00000012886	ENSACIG00000012915	MYADM (ENSACIG00000012947)	pex19 (ENSACIG00000012968)	copa (ENSACIG00000013021)	NCSTN (ENSACIG00000013106)	VANGL2 (ENSACIG00000013162)	ENSACIG00000013180	ENSACIG00000013191	tesk2 (ENSACIG00000013226)	ENSACIG00000013290	ENSACIG00000013309	pnp5b (ENSACIG00000013425)	KCNJ10 (ENSACIG00000014062) ##22	ENSACIG00000014121	ENSACIG00000014132	ENSACIG00000014156	ENSACIG00000014167	ENSACIG00000014188	kirrel1b (ENSACIG00000014241)	cadm3 (ENSACIG00000014408)	sdhc (ENSACIG00000014478)	atp1a2a (ENSACIG00000014707)	mpz (ENSACIG00000014772)	lig1 (ENSACIG00000014952)	ENSACIG00000014993	PIP4P1 (ENSACIG00000015010)	dnaaf6 (ENSACIG00000015028)	ENSACIG00000015053
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01030000234540.A.a.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00990000208298	ENSGT00940000159936	ENSGT00940000177717	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Oryzias	ANCESTRAL SPECIES	25	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01100000264828	ENSGT01060000249239	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT00940000177717	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Oryzias_b	ANCESTRAL SPECIES	28	ENSGT00390000006103	ENSGT00390000000337	ENSGT00940000154642.d	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT00940000161411	ENSGT00940000164807.E.a.b	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01100000264828	ENSGT01060000249239	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT00940000177717	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Indian medaka	MODERN SPECIES	1	ltb4r2b (ENSOMEG00000022914)	ENSOMEG00000022968	MYADM (ENSOMEG00000022990)	pex19 (ENSOMEG00000023000)	copa (ENSOMEG00000023019)	NCSTN (ENSOMEG00000000633)	ENSOMEG00000023638	ENSOMEG00000023644	ENSOMEG00000023651	ENSOMEG00000023662	ENSOMEG00000023665	ENSOMEG00000023669	ENSOMEG00000023671	pnp5b (ENSOMEG00000023676)	ENSOMEG00000023680	KCNJ10 (ENSOMEG00000023690) ##22	ENSOMEG00000023699	ENSOMEG00000023706	kirrel1b (ENSOMEG00000023714)	cadm3 (ENSOMEG00000023724)	sdhc (ENSOMEG00000023730)	atp1a2a (ENSOMEG00000023736)	mpz (ENSOMEG00000023742)	ENSOMEG00000023754	ENSOMEG00000023762	PIP4P1 (ENSOMEG00000023765)	dnaaf6 (ENSOMEG00000000746)	ENSOMEG00000023775	eif3f (ENSOMEG00000023782)	KCNJ9 (ENSOMEG00000023788) ##18	ENSOMEG00000023794
Javanese ricefish	MODERN SPECIES	8	ENSOJAG00000003231	armc8 (ENSOJAG00000003372)	rab5b (ENSOJAG00000004045)	lcmt2 (ENSOJAG00000004082)	crygs1 (ENSOJAG00000004187)	tbccd1 (ENSOJAG00000004328)	satb2 (ENSOJAG00000004485)	PLCL1 (ENSOJAG00000004658)	ENSOJAG00000004685	ENSOJAG00000004721	ENSOJAG00000004746	ENSOJAG00000004770	ENSOJAG00000004816	ENSOJAG00000004866	pnp5b (ENSOJAG00000004883)	KCNJ10 (ENSOJAG00000004904) ##22	ENSOJAG00000004932	ENSOJAG00000004964	kirrel1b (ENSOJAG00000005035)	cadm3 (ENSOJAG00000005224)	sdhc (ENSOJAG00000005251)	atp1a2a (ENSOJAG00000005506)	ENSOJAG00000008043	mpz (ENSOJAG00000008075)	lig1 (ENSOJAG00000008289)	ENSOJAG00000009940	PIP4P1 (ENSOJAG00000009952)	dnaaf6 (ENSOJAG00000009986)	ENSOJAG00000010015	eif3f (ENSOJAG00000010041)	KCNJ9 (ENSOJAG00000010246) ##18
Oryzias_a	ANCESTRAL SPECIES	25	ENSGT00940000154642.d	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT01100000264828	ENSGT01060000249239	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18	ENSGT00940000166891.b
Japanese Medaka HdrR	MODERN SPECIES	8	DNAH10 (ENSORLG00000002971)	ltb4r2b (ENSORLG00000024384)	ENSORLG00000002953	MYADM (ENSORLG00000023190)	pex19 (ENSORLG00000002946)	copa (ENSORLG00000002857)	NCSTN (ENSORLG00000002927)	VANGL2 (ENSORLG00000030586)	ENSORLG00000021878	tesk2 (ENSORLG00000002769)	ENSORLG00000029343	ENSORLG00000002751	ENSORLG00000028674	ENSORLG00000002746	pnp5b (ENSORLG00000002737)	KCNJ10 (ENSORLG00000002717) ##22	ENSORLG00000025232	ENSORLG00000028256	kirrel1b (ENSORLG00000002699)	cadm3 (ENSORLG00000022548)	sdhc (ENSORLG00000002673)	atp1a2a (ENSORLG00000002639)	ENSORLG00000022616	mpz (ENSORLG00000002561)	ENSORLG00000024861	ENSORLG00000027353	ENSORLG00000026721	lig1 (ENSORLG00000002549)	ENSORLG00000027496	ENSORLG00000023923	dnaaf6 (ENSORLG00000002494)
Chinese medaka	MODERN SPECIES	2338																ENSOSIG00000004372 ##22
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562	ENSGT01030000234540.A.a.a	ENSGT01000000214758	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00990000208298	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Aplocheiloidei	ANCESTRAL SPECIES	11	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT01100000263505.a	ENSGT00940000165396.B	ENSGT01100000263491.a.b.a.a.a.a.b.q.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562	ENSGT01030000234540.A.a.a	ENSGT01000000214758	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a	ENSGT01080000257365.b.a.b.b ##18
Mangrove rivulus	MODERN SPECIES	17	ltb4r2b (ENSKMAG00000017871)	NFATC4 (ENSKMAG00000017844)	MYADM (ENSKMAG00000017828)	pex19 (ENSKMAG00000017817)	copa (ENSKMAG00000017706)	NCSTN (ENSKMAG00000017658)	VANGL2 (ENSKMAG00000017619)	ENSKMAG00000017585	ENSKMAG00000017573	tesk2 (ENSKMAG00000017550)	ENSKMAG00000017535	ENSKMAG00000017519	ENSKMAG00000017502	ENSKMAG00000017478	ENSKMAG00000017454	KCNJ10 (ENSKMAG00000017421) ##22	ENSKMAG00000017405	ENSKMAG00000017396	ENSKMAG00000017378	kirrel1b (ENSKMAG00000017335)	cadm3 (ENSKMAG00000017272)	sdhc (ENSKMAG00000017170)	atp1a2a (ENSKMAG00000017108)	mpz (ENSKMAG00000017080)	lig1 (ENSKMAG00000017040)	PIP4P1 (ENSKMAG00000017014)	dnaaf6 (ENSKMAG00000016996)	eif3f (ENSKMAG00000016965)	ENSKMAG00000016952	KCNJ9 (ENSKMAG00000016933) ##18	ENSKMAG00000016907
Turquoise killifish	MODERN SPECIES	1618	SDR39U1 (ENSNFUG00015022751)	ltb4r2b (ENSNFUG00015022749)	ENSNFUG00015022742	MYADM (ENSNFUG00015022739)	pex19 (ENSNFUG00015022710)	copa (ENSNFUG00015022082)	NCSTN (ENSNFUG00015021428)	VANGL2 (ENSNFUG00015021393)	ENSNFUG00015021373	Nfu_g_1_013066 (ENSNFUG00015021370)	TESK2 (ENSNFUG00015021343)	CU984580.1 (ENSNFUG00015021337)	ENSNFUG00015021336	ENSNFUG00015021333	ENSNFUG00015021330	KCNJ10 (ENSNFUG00015021327) ##22	ENSNFUG00015021324	ENSNFUG00015021323	ENSNFUG00015021320	ENSNFUG00015021319	kirrel1b (ENSNFUG00015021298)	ENSNFUG00015021296	ENSNFUG00015021293	CADM3 (ENSNFUG00015021288)	sdhc (ENSNFUG00015021258)	atp1a2a (ENSNFUG00015021204)	mpz (ENSNFUG00015021181)	lig1 (ENSNFUG00015020384)	ENSNFUG00015020349	TMEM55B (ENSNFUG00015020343)	dnaaf6 (ENSNFUG00015020337)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a.m	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562	ENSGT01030000234540.A.a.a	ENSGT01000000214758.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00990000208298	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a.m	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562.b	ENSGT01030000234540.A.a.a	ENSGT01000000214758.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00990000208298	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Poecilia	ANCESTRAL SPECIES	16	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263556.a.a.q.c.a	ENSGT01100000263505.b.b.a.a.a.b.e.b	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562.a	ENSGT01030000234540.A.a.a	ENSGT01000000214758.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00990000208298	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
NAME_6	ANCESTRAL SPECIES	129			ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562.a	ENSGT01030000234540.A.a.a	ENSGT01000000214758.a	ENSGT00940000155795.e	ENSGT00940000159779	ENSGT00390000000566	ENSGT00940000159936	ENSGT01030000234556.a.b.b	ENSGT00940000157783	ENSGT00940000167541	ENSGT00940000163212.A	ENSGT00390000003680.a.a.a	ENSGT00390000015219	ENSGT00530000063666.b.db	ENSGT00950000183073.a.a.a
Sailfin molly	MODERN SPECIES	1252										ENSPLAG00000005615	ENSPLAG00000005593	tesk2 (ENSPLAG00000005568)	ENSPLAG00000005556	ENSPLAG00000005546	pnp5b (ENSPLAG00000005528)	KCNJ10 (ENSPLAG00000005513) ##22	ENSPLAG00000005483
Amazon molly	MODERN SPECIES	297	KLF6 (ENSPFOG00000012096)	FZD8 (ENSPFOG00000019972)	CCNY (ENSPFOG00000012118)	NFATC4 (ENSPFOG00000012167)	MYADM (ENSPFOG00000019973)	pex19 (ENSPFOG00000012201)	copa (ENSPFOG00000012212)	ENSPFOG00000012361	VANGL2 (ENSPFOG00000012366)	ENSPFOG00000012455	ENSPFOG00000023496	tesk2 (ENSPFOG00000012556)	ENSPFOG00000012598	ENSPFOG00000012629	pnp5b (ENSPFOG00000012665)	KCNJ10 (ENSPFOG00000012718) ##22	ENSPFOG00000022023	ENSPFOG00000012749	ENSPFOG00000012752	kirrel1b (ENSPFOG00000012758)	cadm3 (ENSPFOG00000012891)	sdhc (ENSPFOG00000012919)	atp1a2a (ENSPFOG00000012970)	mpz (ENSPFOG00000021818)	ENSPFOG00000013438	ENSPFOG00000013649	PIP4P1 (ENSPFOG00000013656)	dnaaf6 (ENSPFOG00000023693)	ENSPFOG00000013703	eif3f (ENSPFOG00000013707)	ENSPFOG00000023826
Guppy	MODERN SPECIES	447	ltb4r2b (ENSPREG00000001252)	ENSPREG00000001232	ENSPREG00000001199	MYADM (ENSPREG00000001182)	pex19 (ENSPREG00000001153)	copa (ENSPREG00000001029)	NCSTN (ENSPREG00000001005)	VANGL2 (ENSPREG00000000964)	ENSPREG00000000936	ENSPREG00000000918	tesk2 (ENSPREG00000000903)	ENSPREG00000000875	ENSPREG00000000853	ENSPREG00000000828	pnp5b (ENSPREG00000000811)	KCNJ10 (ENSPREG00000000784) ##22	ENSPREG00000000757	ENSPREG00000000740	kirrel1b (ENSPREG00000000675)	cadm3 (ENSPREG00000000659)	sdhc (ENSPREG00000000623)	ENSPREG00000020205	atp1a2a (ENSPREG00000020143)	mpz (ENSPREG00000020111)	lig1 (ENSPREG00000020070)	ENSPREG00000020057	PIP4P1 (ENSPREG00000020042)	dnaaf6 (ENSPREG00000020033)	ENSPREG00000020015	eif3f (ENSPREG00000020003)	KCNJ9 (ENSPREG00000019973) ##18
Platyfish	MODERN SPECIES	20	ENSXMAG00000024703	MYADM (ENSXMAG00000020034)	pex19 (ENSXMAG00000005441)	copa (ENSXMAG00000005462)	NCSTN (ENSXMAG00000005522)	VANGL2 (ENSXMAG00000005572)	ENSXMAG00000026803	ENSXMAG00000026944	ENSXMAG00000005609	tesk2 (ENSXMAG00000005610)	ENSXMAG00000023714	ENSXMAG00000005641	ENSXMAG00000022527	ENSXMAG00000022092	pnp5b (ENSXMAG00000005645)	KCNJ10 (ENSXMAG00000024720) ##22	ENSXMAG00000026486	ENSXMAG00000022377	ENSXMAG00000022009	ENSXMAG00000024359	ENSXMAG00000025092	ENSXMAG00000027009	kirrel1b (ENSXMAG00000005665)	cadm3 (ENSXMAG00000005675)	sdhc (ENSXMAG00000005689)	atp1a2a (ENSXMAG00000005698)	mpz (ENSXMAG00000005799)	lig1 (ENSXMAG00000005804)	PIP4P1 (ENSXMAG00000029154)	dnaaf6 (ENSXMAG00000027222)	eif3f (ENSXMAG00000024749)
NAME_4	ANCESTRAL SPECIES	211	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b.g	ENSGT00940000174764	ENSGT00940000157535.m.b	ENSGT01100000263491.a.b.a.b.a.b	ENSGT00940000158765	ENSGT00940000165396.B	ENSGT01100000263505.b.b.a.b.a.b.a.m	ENSGT01100000263556.a.a.q.c.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.h ##22	ENSGT00940000174562
Sheepshead minnow	MODERN SPECIES	1281										tesk2 (ENSCVAG00000006468)	ENSCVAG00000006482	ENSCVAG00000006485	ENSCVAG00000006489	ENSCVAG00000006494	pnp5b (ENSCVAG00000006496)	KCNJ10 (ENSCVAG00000006503) ##22	ENSCVAG00000006526
Mummichog	MODERN SPECIES	428	ENSFHEG00000004677	MYADM (ENSFHEG00000004647)	pex19 (ENSFHEG00000004638)	copa (ENSFHEG00000004619)	NCSTN (ENSFHEG00000000119)	VANGL2 (ENSFHEG00000004497)	ENSFHEG00000004467	ENSFHEG00000004455	ENSFHEG00000004447	ENSFHEG00000004436	tesk2 (ENSFHEG00000004426)	ENSFHEG00000004344	ENSFHEG00000000109	ENSFHEG00000004326	ENSFHEG00000004315	KCNJ10 (ENSFHEG00000004310) ##22	ENSFHEG00000004293	ENSFHEG00000004281	ENSFHEG00000004268
Tiger tail seahorse	MODERN SPECIES	423	ENSHCOG00000011719	KIF5B (ENSHCOG00000011728)	pold3 (ENSHCOG00000011738)	ENSHCOG00000012013	ENSHCOG00000012024	ENSHCOG00000012029	ENSHCOG00000012040	ENSHCOG00000012184	sdr39u1 (ENSHCOG00000012211)	ENSHCOG00000012231	parp2 (ENSHCOG00000012275)	ENSHCOG00000012323	hnrnpc (ENSHCOG00000012333)	ENSHCOG00000012350	pnp5b (ENSHCOG00000012359)	KCNJ10 (ENSHCOG00000012370) ##22	ENSHCOG00000012378	KLHL10 (ENSHCOG00000012420)	KLHL10 (ENSHCOG00000012444)	KLHL10 (ENSHCOG00000012465)	KLHL10 (ENSHCOG00000012498)	KLHL10 (ENSHCOG00000012518)	KLHL10 (ENSHCOG00000012539)	kirrel1b (ENSHCOG00000012580)	ENSHCOG00000012595	cadm3 (ENSHCOG00000012677)	sdhc (ENSHCOG00000012696)	atp1a2a (ENSHCOG00000012734)	mpz (ENSHCOG00000012750)	lig1 (ENSHCOG00000012824)	ENSHCOG00000012914
Pinecone sodierfish	MODERN SPECIES	8	sdr39u1 (ENSMMDG00005023634)	ltb4r2b (ENSMMDG00005023636)	ENSMMDG00005023641	MYADM (ENSMMDG00005023643)	pex19 (ENSMMDG00005023644)	copa (ENSMMDG00005023646)	NCSTN (ENSMMDG00005012188)	VANGL2 (ENSMMDG00005013750)	ENSMMDG00005013754	ENSMMDG00005013755	ENSMMDG00005013757	ENSMMDG00005013758	ENSMMDG00005013762	ENSMMDG00005013764	ENSMMDG00005013775	KCNJ10 (ENSMMDG00005013777) ##22	ENSMMDG00005013781	ENSMMDG00005013788	ENSMMDG00005013792	ENSMMDG00005013794	ENSMMDG00005013796	ENSMMDG00005013802	ENSMMDG00005013808	ENSMMDG00005013810	kirrel1b (ENSMMDG00005013816)	cadm3 (ENSMMDG00005013832)	sdhc (ENSMMDG00005014077)	atp1a2a (ENSMMDG00005014111)	mpz (ENSMMDG00005015287)	ENSMMDG00005015364	ENSMMDG00005017362
Cod	DUPLICATION
Cod	MODERN SPECIES	21	sdr39u1 (ENSGMOG00000010885)	ltb4r2b (ENSGMOG00000010896)	ENSGMOG00000025373	ENSGMOG00000020117	ENSGMOG00000018632	ENSGMOG00000018593	ENSGMOG00000018566	ENSGMOG00000018551	ENSGMOG00000034805	ENSGMOG00000018531	ENSGMOG00000031815	ENSGMOG00000027783	ENSGMOG00000026533	ENSGMOG00000018506	ENSGMOG00000012123	ENSGMOG00000012121 ##22	ENSGMOG00000022941	ENSGMOG00000023324	ENSGMOG00000035848	ENSGMOG00000022448	ENSGMOG00000025397	ENSGMOG00000024875	ENSGMOG00000013289	ENSGMOG00000008152	ENSGMOG00000000536	ENSGMOG00000013992	ENSGMOG00000014041	ENSGMOG00000014082	ENSGMOG00000002104	ENSGMOG00000014218	ENSGMOG00000016516
Cod	MODERN SPECIES	7	sae1 (ENSGMOG00000001497)	ENSGMOG00000024801	ENSGMOG00000031550	pak4 (ENSGMOG00000006194)	ENSGMOG00000013711	hif1al (ENSGMOG00000003074)	ENSGMOG00000029407	ENSGMOG00000007947	ENSGMOG00000007941	ENSGMOG00000007927	ENSGMOG00000007919	ENSGMOG00000007905	ENSGMOG00000001980	ENSGMOG00000002004	ENSGMOG00000002021	ENSGMOG00000010651 ##22	ENSGMOG00000026592	ENSGMOG00000034807	ENSGMOG00000009578	ENSGMOG00000001843	ENSGMOG00000009571	ENSGMOG00000002489	ENSGMOG00000029203	ENSGMOG00000002444	ENSGMOG00000002499	ENSGMOG00000035385	ENSGMOG00000033815	rpl35a (ENSGMOG00000001870)	rnpepl1 (ENSGMOG00000001874)	ENSGMOG00000034465	ap2m1b (ENSGMOG00000001915)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	541													ENSGT00940000157535.m.b	ENSGT01100000263556.a.a.q.d.bb.a	ENSGT00950000182991.A.b.a	ENSGT00990000203615.b.a.a.a.a.i ##22
P. kingsleyae	MODERN SPECIES	435	lig1 (ENSPKIG00000016081)	mpz (ENSPKIG00000016043)	atp1a2a (ENSPKIG00000015984)	sdhc (ENSPKIG00000015959)	ENSPKIG00000015942	cadm3 (ENSPKIG00000015887)	KIRREL1 (ENSPKIG00000015802)	ENSPKIG00000015761	ENSPKIG00000015737	ENSPKIG00000015721	ENSPKIG00000015682	ENSPKIG00000015591	ENSPKIG00000015575	ENSPKIG00000015546	pnp5a (ENSPKIG00000015502)	KCNJ10 (ENSPKIG00000015445) ##22
Asian bonytongue	MODERN SPECIES		ENSSFOG00015013321	lig1 (ENSSFOG00015013283)	mpz (ENSSFOG00015027813)	atp1a2a (ENSSFOG00015013176)	sdhc (ENSSFOG00015024289)	cadm3 (ENSSFOG00015032256)	KIRREL1 (ENSSFOG00015013085)	ENSSFOG00015028331	ENSSFOG00015013016	ENSSFOG00015013001	ENSSFOG00015012988	ENSSFOG00015030836	ENSSFOG00015029872	ENSSFOG00015012911	pnp5b (ENSSFOG00015012858)	KCNJ10 (ENSSFOG00015029171) ##22	vangl2 (ENSSFOG00015012720)	NCSTN (ENSSFOG00015012689)	copa (ENSSFOG00015012569)	pex19 (ENSSFOG00015012542)	MYADM (ENSSFOG00015012530)	ENSSFOG00015012503	ltb4r2b (ENSSFOG00015012493)	ENSSFOG00015012481	parp2 (ENSSFOG00015012443)	ENSSFOG00015012393	sdr39u1 (ENSSFOG00015012372)	zgc:66427 (ENSSFOG00015027016)	ENSSFOG00015027509	ENSSFOG00015012174	apol1 (ENSSFOG00015029392)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.a.a.j ##22
Asian bonytongue	MODERN SPECIES	18	STOX2 (ENSSFOG00015016321)	rwdd (ENSSFOG00015016340)	enpp6 (ENSSFOG00015016299)	irf2 (ENSSFOG00015016268)	ENSSFOG00015016228	snx25 (ENSSFOG00015016180)	zgc:153146 (ENSSFOG00015016159)	zgc:77880 (ENSSFOG00015016117)	PIP4P1 (ENSSFOG00015026379)	KIRREL1 (ENSSFOG00015016073)	ndufs2 (ENSSFOG00015016033)	ENSSFOG00015016020	ENSSFOG00015015991	ENSSFOG00015015958	ENSSFOG00015026520	KCNJ10 (ENSSFOG00015015941) ##22	OTULIN (ENSSFOG00015015927)	otulina (ENSSFOG00015025439)	POU6F2 (ENSSFOG00015015897)	vps41 (ENSSFOG00015015870)	SFRP4 (ENSSFOG00015015826)	ENSSFOG00015015807	RNF182 (ENSSFOG00015015797)	hyi (ENSSFOG00015015784)	SZT2 (ENSSFOG00015015645)	garem (ENSSFOG00015015612)	ncf2 (ENSSFOG00015015549)	zgc:109982 (ENSSFOG00015015521)	med8 (ENSSFOG00015015491)	CLDN18 (ENSSFOG00015015473)	sox14 (ENSSFOG00015015459)
Reedfish	MODERN SPECIES	7	ndufa3 (ENSECRG00000016125)	zgc:158689 (ENSECRG00000015876)	ENSECRG00000015806	ENSECRG00000015782	KCNJ14 (ENSECRG00000015425)	ENSECRG00000015356	ENSECRG00000014957	si:ch211-120k19.1 (ENSECRG00000014836)	rpl18 (ENSECRG00000014717)	ENSECRG00000014658	ENSECRG00000014637	CADM3 (ENSECRG00000014605)	sdhc (ENSECRG00000014575)	mpz (ENSECRG00000014498)	mpz (ENSECRG00000014403)	ENSECRG00000014359 ##22	serpina10a (ENSECRG00000014338)	atxn3 (ENSECRG00000014279)	UNC79 (ENSECRG00000014088)	tmem251 (ENSECRG00000014030)	ubr7 (ENSECRG00000013985)	btbd7 (ENSECRG00000013948)	ENSECRG00000013930	ERH (ENSECRG00000013887)	ASB2 (ENSECRG00000013858)	GPX2 (ENSECRG00000013843)	rab15 (ENSECRG00000013824)	fntb (ENSECRG00000013798)	max (ENSECRG00000013780)	ENSECRG00000013762	fut8a (ENSECRG00000013741)
Elephant shark	MODERN SPECIES	2194																ENSCMIG00000001446 ##22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Lamprey	MODERN SPECIES	3048																ENSPMAG00000001171 ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Reedfish	MODERN SPECIES	3	mtm1 (ENSECRG00000018762)	trpc5a (ENSECRG00000018722)	alg13 (ENSECRG00000018665)	cnpy3 (ENSECRG00000018640)	ENSECRG00000018610	ENSECRG00000018573	PAK3 (ENSECRG00000018293)	kif4 (ENSECRG00000018160)	ammecr1 (ENSECRG00000018108)	TMEM164 (ENSECRG00000018088)	F8 (ENSECRG00000018034)	fundc2 (ENSECRG00000018006)	CMC4 (ENSECRG00000017992)	BRCC3 (ENSECRG00000017936)	ENSECRG00000016245	ENSECRG00000016123 ##22	GABRA3 (ENSECRG00000015831)	ENSECRG00000015735	ENSECRG00000015708	ENSECRG00000015693	mpp1 (ENSECRG00000015659)	dkc1 (ENSECRG00000015571)	ENSECRG00000015513	WDR44 (ENSECRG00000015455)	klhl13 (ENSECRG00000015324)	ENSECRG00000015281	slc6a14 (ENSECRG00000015197)	slc6a14 (ENSECRG00000015088)	agtr2 (ENSECRG00000014980)	slc6a14 (ENSECRG00000014801)	agtr2 (ENSECRG00000014762)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00990000203615.b.a.a.b ##22
Golden-line barbel	MODERN SPECIES	2114														ENSSGRG00000016410	pnp5b (ENSSGRG00000016412)	ENSSGRG00000016414 ##22	foxl2b (ENSSGRG00000016415)	ENSSGRG00000016416
Ciona	ANCESTRAL SPECIES	1249																ENSGT00990000203615.b.a.a #22	ENSGT01060000248594.d.b
Ciona intestinalis	MODERN SPECIES	8	ENSCING00000013518	ENSCING00000013517	ENSCING00000018386	erf2 (ENSCING00000005070)	ENSCING00000005076	ENSCING00000021194	ENSCING00000022997	ENSCING00000005086	ENSCING00000020805	ENSCING00000013516	ENSCING00000013515	ENSCING00000005090	ENSCING00000020147	ENSCING00000005092	ENSCING00000013512	ENSCING00000005094 #22	ENSCING00000020241	ENSCING00000005096	ENSCING00000013511	ENSCING00000021775	ENSCING00000005097	ENSCING00000020532	ENSCING00000020963	ENSCING00000005105	ENSCING00000005106	ENSCING00000013509	ENSCING00000020994	ENSCING00000016392	ENSCING00000015439	ENSCING00000021914	ENSCING00000013506