Euteleostomi	ANCESTRAL SPECIES	17	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00940000155871 #10	ENSGT00420000029926	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00530000063722.a #14	ENSGT00940000170596	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b #31	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000159950
Sarcopterygii	ANCESTRAL SPECIES	12	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00940000170596	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048519	ENSGT00940000155728
Tetrapoda	ANCESTRAL SPECIES	22	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.a.b ##21	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728
Amniota	ANCESTRAL SPECIES	49	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728
Mammalia	ANCESTRAL SPECIES	70	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728
Theria	ANCESTRAL SPECIES	2	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Primates	ANCESTRAL SPECIES	6	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000165227 #28	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000165227 #28	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519
Hominidae	ANCESTRAL SPECIES	4	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000165227 #28	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519
Orangutan	MODERN SPECIES	3	RASSF8 (ENSPPYG00000004371) #7	LMNTD1 (ENSPPYG00000004370) #8	ENSPPYG00000030909 #9	KRAS (ENSPPYG00000041739) #10	ENSPPYG00000034871 #11	ETFRF1 (ENSPPYG00000004368) #12	DNAI7 (ENSPPYG00000038936) #13	ENSPPYG00000005175 #14	BCAT1 (ENSPPYG00000004365) #15	SOX5 (ENSPPYG00000004363) #16	ETNK1 (ENSPPYG00000040411) #17	C2CD5 (ENSPPYG00000004361) #18	ST8SIA1 (ENSPPYG00000004360) #19	CMAS (ENSPPYG00000004359) #20	ABCC9 (ENSPPYG00000004358) #21	KCNJ8 (ENSPPYG00000004357) #22	LDHB (ENSPPYG00000004356) #23	GYS2 (ENSPPYG00000004355) #24	SPX (ENSPPYG00000037855) #25	GOLT1B (ENSPPYG00000004353) #26	RECQL (ENSPPYG00000004352) #27	ENSPPYG00000041458 #28	PYROXD1 (ENSPPYG00000004351) #29	IAPP (ENSPPYG00000034050) #30	SLCO1A2 (ENSPPYG00000004350) #31	ENSPPYG00000037021 #32	CEP20 (ENSPPYG00000032006) #33	ENSPPYG00000034632 #34	SLCO1B1 (ENSPPYG00000004349) #35	ENSPPYG00000040296 #36	SLCO1B3 (ENSPPYG00000004348) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00940000154037.A.n.a.a
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00390000014814.a.b.a.a.b	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00940000154037.A.n.a.a
Pan	ANCESTRAL SPECIES	4	ENSGT00390000014814.a.b.a.a.b	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT00390000007831	ENSGT00950000183124.B	ENSGT00510000048550	ENSGT00390000004106
Bonobo	MODERN SPECIES	3	ENSPPAG00000041642	LMNTD1 (ENSPPAG00000019285) #8	KRAS (ENSPPAG00000038418) #10	ETFRF1 (ENSPPAG00000039750) #12	DNAI7 (ENSPPAG00000029931) #13	ENSPPAG00000030103 #14	ENSPPAG00000034604	BCAT1 (ENSPPAG00000029336) #15	ENSPPAG00000031238	SOX5 (ENSPPAG00000035103) #16	ETNK1 (ENSPPAG00000041246) #17	C2CD5 (ENSPPAG00000037476) #18	ST8SIA1 (ENSPPAG00000040964) #19	CMAS (ENSPPAG00000039714) #20	ABCC9 (ENSPPAG00000034422) #21	KCNJ8 (ENSPPAG00000040399) #22	LDHB (ENSPPAG00000033626) #23	GYS2 (ENSPPAG00000042144) #24	SPX (ENSPPAG00000029701) #25	GOLT1B (ENSPPAG00000031613) #26	RECQL (ENSPPAG00000030306) #27	PYROXD1 (ENSPPAG00000030785) #29	IAPP (ENSPPAG00000033571) #30	SLCO1A2 (ENSPPAG00000028197) #31	SLCO1B1 (ENSPPAG00000031308) #35	ENSPPAG00000014485 #36	IFNG (ENSPPAG00000042020)	IL26 (ENSPPAG00000030617)	IL22 (ENSPPAG00000027135)	MDM1 (ENSPPAG00000031903)	ENSPPAG00000000159
Chimpanzee	MODERN SPECIES	3	ENSPTRG00000048694	KRAS (ENSPTRG00000004775) #10	ETFRF1 (ENSPTRG00000042785) #12	DNAI7 (ENSPTRG00000004774) #13	IRAG2 (ENSPTRG00000004773) #14	ENSPTRG00000042522	ENSPTRG00000040566	BCAT1 (ENSPTRG00000004772) #15	ENSPTRG00000051787	SOX5 (ENSPTRG00000004770) #16	ETNK1 (ENSPTRG00000004768) #17	C2CD5 (ENSPTRG00000004767) #18	ST8SIA1 (ENSPTRG00000050648) #19	CMAS (ENSPTRG00000004765) #20	ABCC9 (ENSPTRG00000004764) #21	KCNJ8 (ENSPTRG00000004763) #22	LDHB (ENSPTRG00000004762) #23	GYS2 (ENSPTRG00000004761) #24	SPX (ENSPTRG00000004760) #25	GOLT1B (ENSPTRG00000004759) #26	RECQL (ENSPTRG00000004758) #27	PYROXD1 (ENSPTRG00000004757) #29	IAPP (ENSPTRG00000004756) #30	SLCO1A2 (ENSPTRG00000004755) #31	SLCO1B1 (ENSPTRG00000004754) #35	ENSPTRG00000004750 #36	SLCO1B3 (ENSPTRG00000044231) #37	IFNG (ENSPTRG00000005193)	IL26 (ENSPTRG00000005194)	IL22 (ENSPTRG00000005195)	MDM1 (ENSPTRG00000005196)
Human	MODERN SPECIES	3	SSPN (ENSG00000123096)	BHLHE41 (ENSG00000123095)	RASSF8 (ENSG00000123094) #7	LMNTD1 (ENSG00000152936) #8	KRAS (ENSG00000133703) #10	ETFRF1 (ENSG00000205707) #12	DNAI7 (ENSG00000118307) #13	IRAG2 (ENSG00000118308) #14	BCAT1 (ENSG00000060982) #15	SOX5 (ENSG00000134532) #16	ETNK1 (ENSG00000139163) #17	C2CD5 (ENSG00000111731) #18	ST8SIA1 (ENSG00000111728) #19	CMAS (ENSG00000111726) #20	ABCC9 (ENSG00000069431) #21	KCNJ8 (ENSG00000121361) #22	LDHB (ENSG00000111716) #23	GYS2 (ENSG00000111713) #24	SPX (ENSG00000134548) #25	GOLT1B (ENSG00000111711) #26	RECQL (ENSG00000004700) #27	PYROXD1 (ENSG00000121350) #29	IAPP (ENSG00000121351) #30	SLCO1A2 (ENSG00000084453) #31	SLCO1B1 (ENSG00000134538) #35	SLCO1B3-SLCO1B7 (ENSG00000257046)	SLCO1B3 (ENSG00000111700) #37	SLCO1C1 (ENSG00000139155) ##31	PDE3A (ENSG00000172572)	AEBP2 (ENSG00000139154)	PLEKHA5 (ENSG00000052126)
Gorilla	MODERN SPECIES	3	ENSGGOG00000036425	KRAS (ENSGGOG00000008043) #10	ETFRF1 (ENSGGOG00000008571) #12	DNAI7 (ENSGGOG00000011368) #13	ENSGGOG00000003082 #14	ENSGGOG00000027972	ENSGGOG00000026884	BCAT1 (ENSGGOG00000009816) #15	ENSGGOG00000037786	SOX5 (ENSGGOG00000016264) #16	ETNK1 (ENSGGOG00000004013) #17	C2CD5 (ENSGGOG00000013081) #18	ST8SIA1 (ENSGGOG00000001398) #19	CMAS (ENSGGOG00000015061) #20	ABCC9 (ENSGGOG00000023368) #21	KCNJ8 (ENSGGOG00000008956) #22	ENSGGOG00000015758 ##23	GYS2 (ENSGGOG00000006428) #24	SPX (ENSGGOG00000010982) #25	GOLT1B (ENSGGOG00000025543) #26	RECQL (ENSGGOG00000010985) #27	PYROXD1 (ENSGGOG00000042087) #29	ENSGGOG00000009624	IAPP (ENSGGOG00000023493) #30	SLCO1A2 (ENSGGOG00000010721) #31	SLCO1B1 (ENSGGOG00000043146) #35	WIF1 (ENSGGOG00000002585)	LEMD3 (ENSGGOG00000006729)	ENSGGOG00000010153	ENSGGOG00000022670	ENSGGOG00000036483
Gibbon	MODERN SPECIES	15	RASSF8 (ENSNLEG00000005293) #7	LMNTD1 (ENSNLEG00000005275) #8	KRAS (ENSNLEG00000027684) #10	ETFRF1 (ENSNLEG00000005260) #12	DNAI7 (ENSNLEG00000005202) #13	ENSNLEG00000005126 #14	ENSNLEG00000005199	BCAT1 (ENSNLEG00000005083) #15	ENSNLEG00000030792	SOX5 (ENSNLEG00000005036) #16	ETNK1 (ENSNLEG00000005027) #17	C2CD5 (ENSNLEG00000004994) #18	ST8SIA1 (ENSNLEG00000004978) #19	CMAS (ENSNLEG00000004937) #20	ABCC9 (ENSNLEG00000004911) #21	KCNJ8 (ENSNLEG00000004907) #22	LDHB (ENSNLEG00000004858) #23	GYS2 (ENSNLEG00000004843) #24	SPX (ENSNLEG00000033976) #25	GOLT1B (ENSNLEG00000004818) #26	RECQL (ENSNLEG00000004797) #27	PYROXD1 (ENSNLEG00000004784) #29	IAPP (ENSNLEG00000004779) #30	ENSNLEG00000032965	SLCO1A2 (ENSNLEG00000004749) #31	SLCO1B1 (ENSNLEG00000004722) #35	ENSNLEG00000030381 #36	SLCO1B3 (ENSNLEG00000004681) #37	SLCO1C1 (ENSNLEG00000004608) ##31	PDE3A (ENSNLEG00000004579)	AEBP2 (ENSNLEG00000004553)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00510000048519
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00560000078473	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00510000048519
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00510000048519
Macaca	ANCESTRAL SPECIES	6	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00510000048519	ENSGT00940000155728	ENSGT00390000014856.c
Pig-tailed macaque	MODERN SPECIES	187	BHLHE41 (ENSMNEG00000037151)	RASSF8 (ENSMNEG00000031029) #7	LMNTD1 (ENSMNEG00000039772) #8	KRAS (ENSMNEG00000045179) #10	ETFRF1 (ENSMNEG00000000006) #12	DNAI7 (ENSMNEG00000043789) #13	ENSMNEG00000041822	ENSMNEG00000028506 #14	BCAT1 (ENSMNEG00000041910) #15	SOX5 (ENSMNEG00000034960) #16	ETNK1 (ENSMNEG00000031845) #17	C2CD5 (ENSMNEG00000027964) #18	ST8SIA1 (ENSMNEG00000030673) #19	CMAS (ENSMNEG00000044740) #20	ABCC9 (ENSMNEG00000045266) #21	KCNJ8 (ENSMNEG00000031377) #22	LDHB (ENSMNEG00000032799) #23	GYS2 (ENSMNEG00000037629) #24	SPX (ENSMNEG00000019671) #25
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.a.d.a.a.b	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.a.c	ENSGT00940000155728	ENSGT00980000202150.a.a
Crab-eating macaque	MODERN SPECIES	2	RASSF8 (ENSMFAG00000001620) #7	LMNTD1 (ENSMFAG00000030035) #8	KRAS (ENSMFAG00000047411) #10	ENSMFAG00000056709	ETFRF1 (ENSMFAG00000041072) #12	DNAI7 (ENSMFAG00000032055) #13	ENSMFAG00000041885 #14	BCAT1 (ENSMFAG00000003944) #15	SOX5 (ENSMFAG00000033855) #16	ETNK1 (ENSMFAG00000056470) #17	C2CD5 (ENSMFAG00000038900) #18	ST8SIA1 (ENSMFAG00000042675) #19	ENSMFAG00000059978	CMAS (ENSMFAG00000032764) #20	ABCC9 (ENSMFAG00000041870) #21	KCNJ8 (ENSMFAG00000034423) #22	LDHB (ENSMFAG00000032247) #23	GYS2 (ENSMFAG00000002312) #24	SPX (ENSMFAG00000031485) #25	GOLT1B (ENSMFAG00000045290) #26	RECQL (ENSMFAG00000031470) #27	PYROXD1 (ENSMFAG00000000929) #29	IAPP (ENSMFAG00000041436) #30	SLCO1A2 (ENSMFAG00000039081) #31	ENSMFAG00000064582	ENSMFAG00000055893	SLCO1B3 (ENSMFAG00000037163) #37	SLCO1C1 (ENSMFAG00000032248) ##31	PDE3A (ENSMFAG00000035768)	AEBP2 (ENSMFAG00000032231)	ENSMFAG00000060482
Rhesus	MODERN SPECIES	2	ETFRF1 (ENSMMUG00000042111) #12	DNAI7 (ENSMMUG00000015377) #13	ENSMMUG00000038348	IRAG2 (ENSMMUG00000015374) #14	ENSMMUG00000065144 ##11	BCAT1 (ENSMMUG00000012223) #15	ENSMMUG00000057276	SOX5 (ENSMMUG00000020370) #16	ENSMMUG00000048030	ETNK1 (ENSMMUG00000006643) #17	C2CD5 (ENSMMUG00000006641) #18	ST8SIA1 (ENSMMUG00000003685) #19	ENSMMUG00000059535	CMAS (ENSMMUG00000020808) #20	ABCC9 (ENSMMUG00000020806) #21	KCNJ8 (ENSMMUG00000056014) #22	LDHB (ENSMMUG00000002679) #23	GYS2 (ENSMMUG00000016171) #24	SPX (ENSMMUG00000042352) #25	GOLT1B (ENSMMUG00000040133) #26	RECQL (ENSMMUG00000010857) #27	PYROXD1 (ENSMMUG00000010854) #29	IAPP (ENSMMUG00000032087) #30	SLCO1A2 (ENSMMUG00000008584) #31	SLCO1B3 (ENSMMUG00000020443) #37	SLCO1C1 (ENSMMUG00000008271) ##31	ENSMMUG00000062439	PDE3A (ENSMMUG00000008269)	ENSMMUG00000051412	ENSMMUG00000060789	AEBP2 (ENSMMUG00000016243)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b	ENSGT00510000048519
Olive baboon	MODERN SPECIES	19	ENSPANG00000043398	ENSPANG00000042041	ENSPANG00000013197 #10	ETFRF1 (ENSPANG00000044084) #12	DNAI7 (ENSPANG00000003393) #13	ENSPANG00000018182 #14	BCAT1 (ENSPANG00000013681) #15	ENSPANG00000049022	ENSPANG00000042970	SOX5 (ENSPANG00000016894) #16	ETNK1 (ENSPANG00000015390) #17	C2CD5 (ENSPANG00000021904) #18	ST8SIA1 (ENSPANG00000012259) #19	CMAS (ENSPANG00000001985) #20	ABCC9 (ENSPANG00000005518) #21	KCNJ8 (ENSPANG00000048537) #22	LDHB (ENSPANG00000003488) #23	GYS2 (ENSPANG00000005479) #24	SPX (ENSPANG00000005519) #25	GOLT1B (ENSPANG00000006690) #26	RECQL (ENSPANG00000003394) #27	PYROXD1 (ENSPANG00000020209) #29	ENSPANG00000042748	IAPP (ENSPANG00000001104) #30	SLCO1A2 (ENSPANG00000001103) #31	SLCO1B3 (ENSPANG00000013786) #37	SLCO1C1 (ENSPANG00000016196) ##31	PDE3A (ENSPANG00000003489)	ENSPANG00000037925	ENSPANG00000046807	AEBP2 (ENSPANG00000010276)
Cercopithecinae_d	ANCESTRAL SPECIES	55	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000155774.b.j	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.b ##23	ENSGT00940000153525.g.b.b.a.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.b #36	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00550000074878.`b.a.b
Sooty mangabey	MODERN SPECIES	643		LMNTD1 (ENSCATG00000031002) #8	KRAS (ENSCATG00000030021) #10	ENSCATG00000032146	DNAI7 (ENSCATG00000042312) #13	ENSCATG00000037664 #14	BCAT1 (ENSCATG00000044244) #15	ENSCATG00000045024	SOX5 (ENSCATG00000034740) #16	ETNK1 (ENSCATG00000032053) #17	C2CD5 (ENSCATG00000009084) #18	ST8SIA1 (ENSCATG00000041960) #19	ENSCATG00000038188	CMAS (ENSCATG00000013973) #20	ABCC9 (ENSCATG00000039700) #21	KCNJ8 (ENSCATG00000014719) #22	LDHB (ENSCATG00000042742) #23	GYS2 (ENSCATG00000044601) #24	SPX (ENSCATG00000025475) #25	GOLT1B (ENSCATG00000042234) #26	RECQL (ENSCATG00000036038) #27	PYROXD1 (ENSCATG00000039826) #29	SLCO1A2 (ENSCATG00000039385) #31	IAPP (ENSCATG00000029932) #30	SLCO1B3 (ENSCATG00000038666) #37	SLCO1C1 (ENSCATG00000012565) ##31	PDE3A (ENSCATG00000026399)	ENSCATG00000030441	AEBP2 (ENSCATG00000012414)	PLEKHA5 (ENSCATG00000037106)	ENSCATG00000030042
Drill	MODERN SPECIES	1657													ENSMLEG00000037204	CMAS (ENSMLEG00000028734) #20	ABCC9 (ENSMLEG00000027787) #21	KCNJ8 (ENSMLEG00000022862) #22	ENSMLEG00000003147 ##23
Vervet Monkey	MODERN SPECIES	2	LMNTD1 (ENSCSAG00000007754) #8	KRAS (ENSCSAG00000007777) #10	ETFRF1 (ENSCSAG00000007787) #12	DNAI7 (ENSCSAG00000007796) #13	ENSCSAG00000007824	IRAG2 (ENSCSAG00000007840) #14	ENSCSAG00000007850	ENSCSAG00000019243	BCAT1 (ENSCSAG00000007862) #15	SOX5 (ENSCSAG00000007872) #16	ETNK1 (ENSCSAG00000007885) #17	C2CD5 (ENSCSAG00000007900) #18	ST8SIA1 (ENSCSAG00000007905) #19	CMAS (ENSCSAG00000007912) #20	ABCC9 (ENSCSAG00000007930) #21	KCNJ8 (ENSCSAG00000007933) #22	LDHB (ENSCSAG00000007940) ##23	GYS2 (ENSCSAG00000007951) #24	SPX (ENSCSAG00000007959) #25	GOLT1B (ENSCSAG00000007966) #26	RECQL (ENSCSAG00000007974) #27	PYROXD1 (ENSCSAG00000007982) #29	IAPP (ENSCSAG00000007986) #30	SLCO1A2 (ENSCSAG00000007996) #31	SLCO1B1 (ENSCSAG00000008004) #35	ENSCSAG00000008014 #36	SLCO1B3 (ENSCSAG00000008025) #37	SLCO1C1 (ENSCSAG00000008032) ##31	PDE3A (ENSCSAG00000008069)	AEBP2 (ENSCSAG00000008085)	PLEKHA5 (ENSCSAG00000008097)
Rhinopithecus	ANCESTRAL SPECIES	65	ENSGT00940000155871 #10	ENSGT00390000001810.e #12	ENSGT00390000004708.d #13	ENSGT01030000236698	ENSGT00390000004708.c #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00500000044955.j.b	ENSGT00940000156122.g #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b.f #21	ENSGT00940000156680.b.b.e #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00900000143817	ENSGT00940000156220	ENSGT00940000165227 #28	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT01080000257336.b.e.b.a.b.a.e.a #37	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Golden snub-nosed monkey	MODERN SPECIES	949													ST8SIA1 (ENSRROG00000029263) #19	CMAS (ENSRROG00000038060) #20	ABCC9 (ENSRROG00000039015) #21	KCNJ8 (ENSRROG00000036550) #22
Black snub-nosed monkey	MODERN SPECIES	921															ABCC9 (ENSRBIG00000034754) #21	KCNJ8 (ENSRBIG00000044487) #22	ENSRBIG00000026092 ##23	GYS2 (ENSRBIG00000034309) #24	SPX (ENSRBIG00000033785) #25	GOLT1B (ENSRBIG00000035035) #26	RECQL (ENSRBIG00000034966) #27	PYROXD1 (ENSRBIG00000028819) #29	IAPP (ENSRBIG00000027592) #30	SLCO1A2 (ENSRBIG00000042598) #31	SLCO1B1 (ENSRBIG00000036035) #35	SLCO1B3 (ENSRBIG00000035321) #37	SLCO1C1 (ENSRBIG00000041153) ##31	ENSRBIG00000043614	AEBP2 (ENSRBIG00000042288)	ENSRBIG00000033011	PLEKHA5 (ENSRBIG00000029140)
Platyrrhini	ANCESTRAL SPECIES	44	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b.b ##23	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35
Cebidae	ANCESTRAL SPECIES	2	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT00390000001653	ENSGT00530000063539.b	ENSGT00730000111164	ENSGT00390000012080	ENSGT00940000154429.r
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00940000154785.A.`c	ENSGT01080000257336.b.e.b.a.b.a.f #35	ENSGT00390000001653	ENSGT00530000063539.b	ENSGT00730000111164	ENSGT00390000012080	ENSGT00940000154429.r
Capuchin	MODERN SPECIES	25		ENSCCAG00000031032	KRAS (ENSCCAG00000031963) #10	ETFRF1 (ENSCCAG00000029415) #12	DNAI7 (ENSCCAG00000022275) #13	ENSCCAG00000027617 #14	BCAT1 (ENSCCAG00000008709) #15	ENSCCAG00000033195	SOX5 (ENSCCAG00000018382) #16	ENSCCAG00000023546	ETNK1 (ENSCCAG00000033844) #17	C2CD5 (ENSCCAG00000036282) #18	ST8SIA1 (ENSCCAG00000029200) #19	CMAS (ENSCCAG00000026094) #20	ABCC9 (ENSCCAG00000021984) #21	KCNJ8 (ENSCCAG00000020882) #22	ENSCCAG00000036355 ##23	GYS2 (ENSCCAG00000029055) #24	SPX (ENSCCAG00000025465) #25	GOLT1B (ENSCCAG00000033259) #26	RECQL (ENSCCAG00000028085) #27	PYROXD1 (ENSCCAG00000027652) #29	IAPP (ENSCCAG00000020992) #30	SLCO1A2 (ENSCCAG00000027720) #31	ENSCCAG00000033442	SLCO1B1 (ENSCCAG00000032141) #35	ENSCCAG00000020147	ENSCCAG00000037892	ENSCCAG00000006745	SLC35E3 (ENSCCAG00000031394)	NUP107 (ENSCCAG00000018046)
Bolivian squirrel monkey	MODERN SPECIES	60	BHLHE41 (ENSSBOG00000021412)	RASSF8 (ENSSBOG00000021926) #7	LMNTD1 (ENSSBOG00000026881) #8	KRAS (ENSSBOG00000022477) #10	ETFRF1 (ENSSBOG00000025823) #12	DNAI7 (ENSSBOG00000028936) #13	ENSSBOG00000019545 #14	ENSSBOG00000033246	BCAT1 (ENSSBOG00000019950) #15	SOX5 (ENSSBOG00000035936) #16	ETNK1 (ENSSBOG00000032121) #17	C2CD5 (ENSSBOG00000030915) #18	ST8SIA1 (ENSSBOG00000025152) #19	CMAS (ENSSBOG00000021172) #20	ABCC9 (ENSSBOG00000021746) #21	KCNJ8 (ENSSBOG00000025235) #22	ENSSBOG00000026007 ##23	GYS2 (ENSSBOG00000034889) #24	SPX (ENSSBOG00000033488) #25	GOLT1B (ENSSBOG00000030022) #26	RECQL (ENSSBOG00000005645) #27	PYROXD1 (ENSSBOG00000021709) #29	IAPP (ENSSBOG00000032613) #30	SLCO1A2 (ENSSBOG00000035733) #31	ENSSBOG00000027037	SLCO1B1 (ENSSBOG00000027016) #35	ENSSBOG00000036231	MDM2 (ENSSBOG00000014544)	SLC35E3 (ENSSBOG00000032921)	NUP107 (ENSSBOG00000029756)	RAP1B (ENSSBOG00000023694)
Marmoset	MODERN SPECIES	21	BHLHE41 (ENSCJAG00000045144)	RASSF8 (ENSCJAG00000038818) #7	LMNTD1 (ENSCJAG00000045286) #8	KRAS (ENSCJAG00000044757) #10	ETFRF1 (ENSCJAG00000082700) #12	DNAI7 (ENSCJAG00000038718) #13	ENSCJAG00000047139 #14	BCAT1 (ENSCJAG00000044064) #15	SOX5 (ENSCJAG00000044866) #16	ETNK1 (ENSCJAG00000042185) #17	ENSCJAG00000072867	C2CD5 (ENSCJAG00000047559) #18	ST8SIA1 (ENSCJAG00000039573) #19	CMAS (ENSCJAG00000041487) #20	ABCC9 (ENSCJAG00000042358) #21	KCNJ8 (ENSCJAG00000041578) #22	ENSCJAG00000086464	ENSCJAG00000047275 ##23	GYS2 (ENSCJAG00000044223) #24	SPX (ENSCJAG00000048478) #25	GOLT1B (ENSCJAG00000044214) #26	RECQL (ENSCJAG00000044420) #27	PYROXD1 (ENSCJAG00000040053) #29	IAPP (ENSCJAG00000040116) #30	SLCO1A2 (ENSCJAG00000045935) #31	SLCO1B1 (ENSCJAG00000044381) #35	ENSCJAG00000081300	ENSCJAG00000020669	ENSCJAG00000007464	ENSCJAG00000070772	SLC35E3 (ENSCJAG00000007448)
Mas night monkey	MODERN SPECIES	1110	LMNTD1 (ENSANAG00000015391) #8	ENSANAG00000020670	KRAS (ENSANAG00000030296) #10	ENSANAG00000020002	DNAI7 (ENSANAG00000030533) #13	ENSANAG00000031949 #14	BCAT1 (ENSANAG00000024086) #15	SOX5 (ENSANAG00000035934) #16	ENSANAG00000019454	ENSANAG00000028516	ETNK1 (ENSANAG00000028253) #17	C2CD5 (ENSANAG00000029541) #18	ST8SIA1 (ENSANAG00000027332) #19	CMAS (ENSANAG00000012777) #20	ABCC9 (ENSANAG00000029123) #21	KCNJ8 (ENSANAG00000036917) #22	ENSANAG00000031606 ##23
Tarsier	MODERN SPECIES	5825														ENSTSYG00000029770 #20	ABCC9 (ENSTSYG00000001638) #21	KCNJ8 (ENSTSYG00000029794) #22	LDHB (ENSTSYG00000013759) #23	GYS2 (ENSTSYG00000013730) #24	SPX (ENSTSYG00000009237) #25	GOLT1B (ENSTSYG00000031606) #26	RECQL (ENSTSYG00000009224) #27	PYROXD1 (ENSTSYG00000003646) #29	IAPP (ENSTSYG00000012780) #30	SLCO1A2 (ENSTSYG00000012426) #31	ENSTSYG00000009981 #35
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000159950	ENSGT00940000159982
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT01030000236698	ENSGT00940000155653.a	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT01030000236698	ENSGT00940000155653.a	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Coquerels sifaka	MODERN SPECIES	213	LMNTD1 (ENSPCOG00000004145) #8	ENSPCOG00000016197	ETFRF1 (ENSPCOG00000014691) #12	DNAI7 (ENSPCOG00000023975) #13	IRAG2 (ENSPCOG00000025021) #14	BCAT1 (ENSPCOG00000018741) #15	ENSPCOG00000019414	SOX5 (ENSPCOG00000019087) #16	ENSPCOG00000022604	ETNK1 (ENSPCOG00000018996) #17	C2CD5 (ENSPCOG00000023472) #18	ST8SIA1 (ENSPCOG00000020559) #19	ENSPCOG00000019290	CMAS (ENSPCOG00000023252) #20	ENSPCOG00000015402 #21	KCNJ8 (ENSPCOG00000027509) #22	LDHB (ENSPCOG00000023697) #23	GYS2 (ENSPCOG00000027132) #24	SPX (ENSPCOG00000023009) #25	GOLT1B (ENSPCOG00000013400) #26	RECQL (ENSPCOG00000027353) #27	PYROXD1 (ENSPCOG00000014690) #29	SLCO1A2 (ENSPCOG00000021336) #31	ENSPCOG00000027316 #35	SLCO1C1 (ENSPCOG00000022799) ##31	PDE3A (ENSPCOG00000019152)
Greater bamboo lemur	MODERN SPECIES	23						ENSPSMG00000012175	ENSPSMG00000012147 #14	BCAT1 (ENSPSMG00000012050) #15	SOX5 (ENSPSMG00000011806) #16	ETNK1 (ENSPSMG00000011599) #17	C2CD5 (ENSPSMG00000011377) #18	ST8SIA1 (ENSPSMG00000010990) #19	ENSPSMG00000010977	CMAS (ENSPSMG00000010964) #20	ABCC9 (ENSPSMG00000010926) #21	KCNJ8 (ENSPSMG00000010809) #22	ENSPSMG00000010801
Mouse lemur	MODERN SPECIES	29	RASSF8 (ENSMICG00000006156) #7	LMNTD1 (ENSMICG00000038042) #8	DNAI7 (ENSMICG00000001474) #13	ETFRF1 (ENSMICG00000031339) #12	IRAG2 (ENSMICG00000030721) #14	ENSMICG00000004844 #15	ENSMICG00000036516	ENSMICG00000031363	ENSMICG00000041591	ETNK1 (ENSMICG00000009917) #17	C2CD5 (ENSMICG00000002294) #18	ST8SIA1 (ENSMICG00000002516) #19	ENSMICG00000047152	CMAS (ENSMICG00000004164) #20	ABCC9 (ENSMICG00000009833) #21	KCNJ8 (ENSMICG00000035183) #22	ENSMICG00000043089	LDHB (ENSMICG00000017183) ##23	GYS2 (ENSMICG00000017175) #24	SPX (ENSMICG00000034641) #25	GOLT1B (ENSMICG00000041496) #26	RECQL (ENSMICG00000002664) #27	PYROXD1 (ENSMICG00000043242) #29	IAPP (ENSMICG00000028352) #30	SLCO1A2 (ENSMICG00000001069) #31	ENSMICG00000014786 #35	SLCO1C1 (ENSMICG00000014567) ##31	PDE3A (ENSMICG00000006815)	ENSMICG00000034994	AEBP2 (ENSMICG00000005996)	PLEKHA5 (ENSMICG00000014157)
Bushbaby	MODERN SPECIES	172	RASSF8 (ENSOGAG00000026328) #7	ENSOGAG00000026045	ENSOGAG00000011065 #8	KRAS (ENSOGAG00000014812) #10	ETFRF1 (ENSOGAG00000014810) #12	DNAI7 (ENSOGAG00000014801) #13	IRAG2 (ENSOGAG00000014796) #14	BCAT1 (ENSOGAG00000013677) #15	SOX5 (ENSOGAG00000002524) #16	ETNK1 (ENSOGAG00000033436) #17	C2CD5 (ENSOGAG00000016517) #18	ST8SIA1 (ENSOGAG00000001971) #19	ENSOGAG00000025469	CMAS (ENSOGAG00000001973) #20	ABCC9 (ENSOGAG00000016970) #21	KCNJ8 (ENSOGAG00000031573) #22	LDHB (ENSOGAG00000004763) ##23	GYS2 (ENSOGAG00000004760) #24	SPX (ENSOGAG00000004759) #25	GOLT1B (ENSOGAG00000004756) #26	RECQL (ENSOGAG00000004754) #27	PYROXD1 (ENSOGAG00000004752) #29	IAPP (ENSOGAG00000004750) #30	SLCO1A2 (ENSOGAG00000003032) #31	ENSOGAG00000024308 #35	SLCO1C1 (ENSOGAG00000000850) ##31	PDE3A (ENSOGAG00000000846)	AEBP2 (ENSOGAG00000017202)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Tree shrew	MODERN SPECIES	919															ABCC9 (ENSTBEG00000000829) #21	KCNJ8 (ENSTBEG00000000546) #22
Glires	ANCESTRAL SPECIES	4	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Lagomorpha	ANCESTRAL SPECIES	27	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000159950	ENSGT00950000183119.b
Pika	MODERN SPECIES	5555																KCNJ8 (ENSOPRG00000016675) #22
Rabbit	MODERN SPECIES	19	LMNTD1 (ENSOCUG00000006725) #8	KRAS (ENSOCUG00000012106) #10	ETFRF1 (ENSOCUG00000012099) #12	DNAI7 (ENSOCUG00000015984) #13	IRAG2 (ENSOCUG00000015956) #14	ENSOCUG00000038101	BCAT1 (ENSOCUG00000003963) #15	SOX5 (ENSOCUG00000011479) #16	ENSOCUG00000027097	ETNK1 (ENSOCUG00000014088) #17	C2CD5 (ENSOCUG00000017163) #18	ST8SIA1 (ENSOCUG00000013134) #19	CMAS (ENSOCUG00000013129) #20	ENSOCUG00000022066	ABCC9 (ENSOCUG00000008023) #21	KCNJ8 (ENSOCUG00000008019) #22	LDHB (ENSOCUG00000022015) ##23	GYS2 (ENSOCUG00000008807) #24	SPX (ENSOCUG00000008802) #25	RECQL (ENSOCUG00000008787) #27	GOLT1B (ENSOCUG00000008797) #26	PYROXD1 (ENSOCUG00000008777) #29	ENSOCUG00000002938	SLCO1A2 (ENSOCUG00000016570) #31	ENSOCUG00000015308 #35	SLCO1C1 (ENSOCUG00000007487) ##31	PDE3A (ENSOCUG00000007479)	ENSOCUG00000012000	AEBP2 (ENSOCUG00000016677)	PLEKHA5 (ENSOCUG00000016584)	PLCZ1 (ENSOCUG00000014664)
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Myomorpha	ANCESTRAL SPECIES	15	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.b #23	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Lesser Egyptian jerboa	MODERN SPECIES	111	Stk38l (ENSJJAG00000012259)	Pde3a (ENSJJAG00000013263)	Slco1c1 (ENSJJAG00000016226) ##31	Slco1b2 (ENSJJAG00000014300) #35	ENSJJAG00000014727 #31	Iapp (ENSJJAG00000014968) #30	Pyroxd1 (ENSJJAG00000015474) #29	Recql (ENSJJAG00000017339) #27	Golt1b (ENSJJAG00000018766) #26	ENSJJAG00000019012	Gys2 (ENSJJAG00000019252) #24	St8sia1 (ENSJJAG00000019797) #19	Sult6b2 (ENSJJAG00000020085)	Cmas (ENSJJAG00000020278) #20	ENSJJAG00000020871 #21	Kcnj8 (ENSJJAG00000021363) #22	Ldhb (ENSJJAG00000021607) #23	C2cd5 (ENSJJAG00000022968) #18	Etnk1 (ENSJJAG00000007821) #17	Sox5 (ENSJJAG00000011054) #16	Bcat1 (ENSJJAG00000012001) #15	Irag2 (ENSJJAG00000012617) #14	Casc1 (ENSJJAG00000013952) #13	Etfrf1 (ENSJJAG00000015972) #12	Kras (ENSJJAG00000016513) #10	Tuba3b (ENSJJAG00000017028)	ENSJJAG00000013495	ENSJJAG00000017775 #7	ENSJJAG00000017871	Sspn (ENSJJAG00000018160)	Itpr2 (ENSJJAG00000000125)
Muroidea	ANCESTRAL SPECIES	24	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.c #31	ENSGT01080000257336.b.e.b.a.b.b.d #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Cricetinae	ANCESTRAL SPECIES	32	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.c #31	ENSGT01080000257336.b.e.b.a.b.b.d.d #31	ENSGT01080000257336.b.e.b.a.b.b.d.c #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728
Golden Hamster	MODERN SPECIES	653	ENSMAUG00000015512	ENSMAUG00000010609 #7	ENSMAUG00000020897 #8	Kras (ENSMAUG00000017232) #10	Etfrf1 (ENSMAUG00000016742) #12	Casc1 (ENSMAUG00000002903) #13	Irag2 (ENSMAUG00000019896) #14	Bcat1 (ENSMAUG00000011499) #15	Sox5 (ENSMAUG00000010173) #16	Etnk1 (ENSMAUG00000002984) #17	C2cd5 (ENSMAUG00000012466) #18	St8sia1 (ENSMAUG00000010851) #19	Sult6b2 (ENSMAUG00000015314)	Cmas (ENSMAUG00000020759) #20	Abcc9 (ENSMAUG00000022184) #21	Kcnj8 (ENSMAUG00000021678) #22	Ldhb (ENSMAUG00000008520) ##23	Gys2 (ENSMAUG00000017572) #24	Spx (ENSMAUG00000007861) #25	Golt1b (ENSMAUG00000012152) #26	Recql (ENSMAUG00000010642) #27	Pyroxd1 (ENSMAUG00000021660) #29	Iapp (ENSMAUG00000019252) #30	ENSMAUG00000021587 #31	ENSMAUG00000006842 #31	ENSMAUG00000016138 #31	Slco1b2 (ENSMAUG00000018642) #35	Slco1c1 (ENSMAUG00000014071) ##31	Pde3a (ENSMAUG00000022096)	Aebp2 (ENSMAUG00000014717)	Plekha5 (ENSMAUG00000021190)
Chinese hamster chok1gshd	MODERN SPECIES	225	Rassf8 (ENSCGRG00001000661) #7	ENSCGRG00001001500	Lmntd1 (ENSCGRG00001004513) #8	ENSCGRG00001006529 #10	ENSCGRG00001007087 #12	Casc1 (ENSCGRG00001009857) #13	Irag2 (ENSCGRG00001010745) #14	Bcat1 (ENSCGRG00001011881) #15	Sox5 (ENSCGRG00001014221) #16	Etnk1 (ENSCGRG00001015598) #17	C2cd5 (ENSCGRG00001021395) #18	St8sia1 (ENSCGRG00001000619) #19	Sult6b2 (ENSCGRG00001001663)	Cmas (ENSCGRG00001020466) #20	Abcc9 (ENSCGRG00001000558) #21	Kcnj8 (ENSCGRG00001010695) #22	Ldhb (ENSCGRG00001011147) ##23	Gys2 (ENSCGRG00001012743) #24	Spx (ENSCGRG00001014523) #25	Golt1b (ENSCGRG00001014702) #26	Recql (ENSCGRG00001015141) #27	Pyroxd1 (ENSCGRG00001015622) #29	ENSCGRG00001017742 #31	ENSCGRG00001020253 #31	Slco1b2 (ENSCGRG00001021568) #35	Slco1c1 (ENSCGRG00001023174) ##31	Pde3a (ENSCGRG00001002138)	Aebp2 (ENSCGRG00001009576)	Plekha5 (ENSCGRG00001015772)	Capza3 (ENSCGRG00001015699)	Plcz1 (ENSCGRG00001000621)
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.c #31	ENSGT01080000257336.b.e.b.a.b.b.d.a #31	ENSGT01080000257336.b.e.b.a.b.b.d.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728
Prairie vole	MODERN SPECIES	82	Rassf8 (ENSMOCG00000017540) #7	ENSMOCG00000016727	Lmntd1 (ENSMOCG00000008486) #8	Kras (ENSMOCG00000011313) #10	Etfrf1 (ENSMOCG00000000926) #12	Casc1 (ENSMOCG00000010336) #13	Irag2 (ENSMOCG00000001897) #14	Bcat1 (ENSMOCG00000018342) #15	Sox5 (ENSMOCG00000003982) #16	Etnk1 (ENSMOCG00000015568) #17	C2cd5 (ENSMOCG00000005597) #18	St8sia1 (ENSMOCG00000020160) #19	Sult6b2 (ENSMOCG00000001915)	Cmas (ENSMOCG00000021041) #20	Abcc9 (ENSMOCG00000018016) #21	Kcnj8 (ENSMOCG00000000081) #22	Ldhb (ENSMOCG00000001380) ##23	ENSMOCG00000016666	Gys2 (ENSMOCG00000000198) #24	Spx (ENSMOCG00000006172) #25	Golt1b (ENSMOCG00000019088) #26	Recql (ENSMOCG00000007093) #27	Pyroxd1 (ENSMOCG00000002670) #29	Iapp (ENSMOCG00000012346) #30	ENSMOCG00000020797 #31	ENSMOCG00000012882 #31	ENSMOCG00000015685 #31	ENSMOCG00000003164 #31	Slco1b2 (ENSMOCG00000009708) #35	Slco1c1 (ENSMOCG00000014209) ##31	Pde3a (ENSMOCG00000005904)
Northern American deer mouse	MODERN SPECIES	16	Lmntd1 (ENSPEMG00000014844) #8	Kras (ENSPEMG00000025855) #10	Etfrf1 (ENSPEMG00000023976) #12	Casc1 (ENSPEMG00000008126) #13	Irag2 (ENSPEMG00000023409) #14	Bcat1 (ENSPEMG00000023771) #15	Sox5 (ENSPEMG00000002152) #16	Etnk1 (ENSPEMG00000022752) #17	C2cd5 (ENSPEMG00000007233) #18	ENSPEMG00000026545	ENSPEMG00000001341	St8sia1 (ENSPEMG00000027967) #19	Sult6b2 (ENSPEMG00000012937)	Cmas (ENSPEMG00000015063) #20	Abcc9 (ENSPEMG00000021085) #21	Kcnj8 (ENSPEMG00000028025) #22	ENSPEMG00000016521	Ldhb (ENSPEMG00000020328) ##23	Gys2 (ENSPEMG00000020524) #24	Spx (ENSPEMG00000027728) #25	Golt1b (ENSPEMG00000029358) #26	Recql (ENSPEMG00000016418) #27	Pyroxd1 (ENSPEMG00000017109) #29	Iapp (ENSPEMG00000000249) #30	ENSPEMG00000030143 #31	ENSPEMG00000025745 #31	ENSPEMG00000028944 #31	ENSPEMG00000020815 #31	Slco1b2 (ENSPEMG00000016754) #35	Slco1c1 (ENSPEMG00000020549) ##31	Pde3a (ENSPEMG00000010560)
Murinae	ANCESTRAL SPECIES	4	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.e.b.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.b #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.b.b #31	ENSGT01080000257336.b.e.b.a.b.b.f #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Mus	ANCESTRAL SPECIES	12	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.e.b.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.b #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.b.b #31	ENSGT01080000257336.b.e.b.a.b.b.f #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Mus_A	ANCESTRAL SPECIES	7	ENSGT00950000182839.B.a.a #7	ENSGT00950000182825.B	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.e.b.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.b #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.b.b #31	ENSGT01080000257336.b.e.b.a.b.b.f #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.e.b.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.b #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.b.b #31	ENSGT01080000257336.b.e.b.a.b.b.f.a #31	ENSGT01080000257336.b.e.b.a.b.b.f.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31
Mus_C	ANCESTRAL SPECIES	29	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b.e.b.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.b #31	ENSGT01080000257336.b.e.b.a.b.b.e.a.a #31	ENSGT01080000257336.b.e.b.a.b.b.e.b.b #31	ENSGT01080000257336.b.e.b.a.b.b.f.a #31	ENSGT01080000257336.b.e.b.a.b.b.f.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31
Steppe mouse	MODERN SPECIES	3152									Etnk1 (ENSMSIG00000021958) #17	C2cd5 (ENSMSIG00000020817) #18	ENSMSIG00000020782	St8sia1 (ENSMSIG00000020772) #19	Sult6b2 (ENSMSIG00000020758)	Cmas (ENSMSIG00000020738) #20	Abcc9 (ENSMSIG00000019881) #21	Kcnj8 (ENSMSIG00000019868) #22	Ldhb (ENSMSIG00000019827) ##23	Gys2 (ENSMSIG00000019806) #24	ENSMSIG00000019767 #25	Golt1b (ENSMSIG00000019749) #26	Recql (ENSMSIG00000019632) #27	Pyroxd1 (ENSMSIG00000019613) #29	Iapp (ENSMSIG00000019607) #30	Slco1a5 (ENSMSIG00000019548) #31	Slco1a6 (ENSMSIG00000019523) #31	Gm6614 (ENSMSIG00000019429) #31	Slco1a1 (ENSMSIG00000019360) #31	Slco1a4 (ENSMSIG00000019338) #31	Gm5724 (ENSMSIG00000019292) #31	Slco1b2 (ENSMSIG00000019224) #35	Slco1c1 (ENSMSIG00000019141) ##31
spretus	MODERN SPECIES	15	Rassf8 (MGP_SPRETEiJ_G0030105) #7	MGP_SPRETEiJ_G0030104	Lmntd1 (MGP_SPRETEiJ_G0030103) #8	Kras (MGP_SPRETEiJ_G0030102) #10	Etfrf1 (MGP_SPRETEiJ_G0030101) #12	Casc1 (MGP_SPRETEiJ_G0030100) #13	Irag2 (MGP_SPRETEiJ_G0030099) #14	Bcat1 (MGP_SPRETEiJ_G0030098) #15	Sox5 (MGP_SPRETEiJ_G0030097) #16	Etnk1 (MGP_SPRETEiJ_G0030096) #17	C2cd5 (MGP_SPRETEiJ_G0030095) #18	St8sia1 (MGP_SPRETEiJ_G0030094) #19	Sult6b2 (MGP_SPRETEiJ_G0030093)	Cmas (MGP_SPRETEiJ_G0030092) #20	Abcc9 (MGP_SPRETEiJ_G0030091) #21	Kcnj8 (MGP_SPRETEiJ_G0030090) #22	Ldhb (MGP_SPRETEiJ_G0030089) ##23	Gys2 (MGP_SPRETEiJ_G0030088) #24	Spx (MGP_SPRETEiJ_G0030087) #25	Golt1b (MGP_SPRETEiJ_G0030086) #26	Recql (MGP_SPRETEiJ_G0030085) #27	Pyroxd1 (MGP_SPRETEiJ_G0030084) #29	Iapp (MGP_SPRETEiJ_G0030083) #30	MGP_SPRETEiJ_G0030082 #31	MGP_SPRETEiJ_G0030081	MGP_SPRETEiJ_G0030080 #31	Slco1a1 (MGP_SPRETEiJ_G0030079) #31	Slco1a4 (MGP_SPRETEiJ_G0030078) #31	Gm5724 (MGP_SPRETEiJ_G0030077) #31	Slco1b2 (MGP_SPRETEiJ_G0030076) #35	Slco1c1 (MGP_SPRETEiJ_G0030075) ##31
Mouse	MODERN SPECIES	15	Rassf8 (ENSMUSG00000030259) #7	Tuba3b (ENSMUSG00000067338)	Lmntd1 (ENSMUSG00000054966) #8	Kras (ENSMUSG00000030265) #10	Etfrf1 (ENSMUSG00000040370) #12	Casc1 (ENSMUSG00000043541) #13	Irag2 (ENSMUSG00000030263) #14	Bcat1 (ENSMUSG00000030268) #15	Sox5 (ENSMUSG00000041540) #16	Etnk1 (ENSMUSG00000030275) #17	C2cd5 (ENSMUSG00000030279) #18	St8sia1 (ENSMUSG00000030283) #19	Sult6b2 (ENSMUSG00000048473)	Cmas (ENSMUSG00000030282) #20	Abcc9 (ENSMUSG00000030249) #21	Kcnj8 (ENSMUSG00000030247) #22	Ldhb (ENSMUSG00000030246) ##23	Gys2 (ENSMUSG00000030244) #24	Spx (ENSMUSG00000071112) #25	Golt1b (ENSMUSG00000030245) #26	Recql (ENSMUSG00000030243) #27	Pyroxd1 (ENSMUSG00000041671) #29	Iapp (ENSMUSG00000041681) #30	Slco1a5 (ENSMUSG00000063975) #31	Slco1a6 (ENSMUSG00000079262) #31	Gm6614 (ENSMUSG00000079263) #31	Slco1a1 (ENSMUSG00000041698) #31	Slco1a4 (ENSMUSG00000030237) #31	Gm5724 (ENSMUSG00000084927) #31	Slco1b2 (ENSMUSG00000030236) #35	Slco1c1 (ENSMUSG00000030235) ##31
Ryukyu mouse	MODERN SPECIES	15	Rassf8 (MGP_CAROLIEiJ_G0029050) #7	MGP_CAROLIEiJ_G0029049	Lmntd1 (MGP_CAROLIEiJ_G0029048) #8	Kras (MGP_CAROLIEiJ_G0029047) #10	Etfrf1 (MGP_CAROLIEiJ_G0029046) #12	Casc1 (MGP_CAROLIEiJ_G0029045) #13	Irag2 (MGP_CAROLIEiJ_G0029044) #14	Bcat1 (MGP_CAROLIEiJ_G0029043) #15	Sox5 (MGP_CAROLIEiJ_G0029042) #16	Etnk1 (MGP_CAROLIEiJ_G0029041) #17	C2cd5 (MGP_CAROLIEiJ_G0029040) #18	St8sia1 (MGP_CAROLIEiJ_G0029039) #19	Sult6b2 (MGP_CAROLIEiJ_G0029038)	Cmas (MGP_CAROLIEiJ_G0029037) #20	Abcc9 (MGP_CAROLIEiJ_G0029036) #21	Kcnj8 (MGP_CAROLIEiJ_G0029035) #22	Ldhb (MGP_CAROLIEiJ_G0029034) ##23	Gys2 (MGP_CAROLIEiJ_G0029033) #24	Spx (MGP_CAROLIEiJ_G0029032) #25	Golt1b (MGP_CAROLIEiJ_G0029031) #26	Recql (MGP_CAROLIEiJ_G0029030) #27	Pyroxd1 (MGP_CAROLIEiJ_G0029029) #29	Iapp (MGP_CAROLIEiJ_G0029028) #30	Slco1a5 (MGP_CAROLIEiJ_G0029027) #31	Slco1c1 (MGP_CAROLIEiJ_G0029026) ##31	Pde3a (MGP_CAROLIEiJ_G0029025)	MGP_CAROLIEiJ_G0029024	Aebp2 (MGP_CAROLIEiJ_G0029023)	Plekha5 (MGP_CAROLIEiJ_G0029022)	MGP_CAROLIEiJ_G0029021	Capza3 (MGP_CAROLIEiJ_G0029020)
Shrew mouse	MODERN SPECIES	11	MGP_PahariEiJ_G0022811	Tuba3b (MGP_PahariEiJ_G0022810)	Lmntd1 (MGP_PahariEiJ_G0022809) #8	Kras (MGP_PahariEiJ_G0022808) #10	Etfrf1 (MGP_PahariEiJ_G0022807) #12	Casc1 (MGP_PahariEiJ_G0022806) #13	MGP_PahariEiJ_G0022805	Bcat1 (MGP_PahariEiJ_G0022804) #15	Sox5 (MGP_PahariEiJ_G0022803) #16	Etnk1 (MGP_PahariEiJ_G0022802) #17	C2cd5 (MGP_PahariEiJ_G0022801) #18	St8sia1 (MGP_PahariEiJ_G0022800) #19	Sult6b2 (MGP_PahariEiJ_G0022799)	Cmas (MGP_PahariEiJ_G0022798) #20	Abcc9 (MGP_PahariEiJ_G0022797) #21	Kcnj8 (MGP_PahariEiJ_G0022796) #22	Ldhb (MGP_PahariEiJ_G0022795) ##23	Gys2 (MGP_PahariEiJ_G0022794) #24	Spx (MGP_PahariEiJ_G0022793) #25	Golt1b (MGP_PahariEiJ_G0022792) #26	Recql (MGP_PahariEiJ_G0022791) #27	Pyroxd1 (MGP_PahariEiJ_G0022790) #29	Iapp (MGP_PahariEiJ_G0022789) #30	Slco1c1 (MGP_PahariEiJ_G0022788) ##31	Pde3a (MGP_PahariEiJ_G0022787)	MGP_PahariEiJ_G0022786	Aebp2 (MGP_PahariEiJ_G0022785)	Plekha5 (MGP_PahariEiJ_G0022784)	Capza3 (MGP_PahariEiJ_G0022783)	Plcz1 (MGP_PahariEiJ_G0022782)	MGP_PahariEiJ_G0022781
Rat	MODERN SPECIES	14	Lmntd1 (ENSRNOG00000015910) #8	ENSRNOG00000069406	Etfrf1 (ENSRNOG00000063524) #12	Dnai7 (ENSRNOG00000027630) #13	Irag2 (ENSRNOG00000029308) #14	Bcat1 (ENSRNOG00000015514) #15	AABR07062466.1 (ENSRNOG00000033855)	Sox5 (ENSRNOG00000027869) #16	ENSRNOG00000063999	Etnk1 (ENSRNOG00000014856) #17	C2cd5 (ENSRNOG00000014382) #18	St8sia1 (ENSRNOG00000014018) #19	Sult6b2 (ENSRNOG00000036959)	Cmas (ENSRNOG00000013816) #20	Abcc9 (ENSRNOG00000036960) #21	Kcnj8 (ENSRNOG00000013463) #22	Ldhb (ENSRNOG00000013000) ##23	Gys2 (ENSRNOG00000059753) #24	Spx (ENSRNOG00000053700) #25	Golt1b (ENSRNOG00000058386) #26	Recql (ENSRNOG00000012602) #27	Pyroxd1 (ENSRNOG00000012472) #29	Iapp (ENSRNOG00000012417) #30	Slco1a6 (ENSRNOG00000030894) #31	Slco1a3 (ENSRNOG00000010388) #31	Slco1a1 (ENSRNOG00000036984) #31	Slco1a4 (ENSRNOG00000047493) #31	Slco1b2 (ENSRNOG00000030538) #35	Slco1c1 (ENSRNOG00000009740) ##31	Pde3a (ENSRNOG00000025042)	Aebp2 (ENSRNOG00000008929)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1585															ENSNGAG00000007570 #21	Kcnj8 (ENSNGAG00000018290) #22	Ldhb (ENSNGAG00000014906) ##23	Gys2 (ENSNGAG00000006093) #24	Spx (ENSNGAG00000016215) #25	Golt1b (ENSNGAG00000001445) #26	ENSNGAG00000010997 #27	Pyroxd1 (ENSNGAG00000016219) #29	Iapp (ENSNGAG00000018204) #30	ENSNGAG00000014670	ENSNGAG00000020101 #31	Slco1b2 (ENSNGAG00000016183) #35	Slco1c1 (ENSNGAG00000003736) ##31	Pde3a (ENSNGAG00000017806)	ENSNGAG00000013006
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.a.d #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.a.c #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Naked mole-rat female	MODERN SPECIES	24	KRAS (ENSHGLG00000008775) #10	ENSHGLG00000042649 #12	DNAI7 (ENSHGLG00000017827) #13	LRMP (ENSHGLG00000017644) #14	ENSHGLG00000044797 #15	SOX5 (ENSHGLG00000016643) #16	ENSHGLG00000039682	ENSHGLG00000040973	ETNK1 (ENSHGLG00000011566) #17	ENSHGLG00000034168	C2CD5 (ENSHGLG00000016366) #18	ST8SIA1 (ENSHGLG00000009621) #19	ENSHGLG00000010665	CMAS (ENSHGLG00000006107) #20	ABCC9 (ENSHGLG00000014958) #21	KCNJ8 (ENSHGLG00000015650) #22	Ldhb (ENSHGLG00000044218) ##23	ENSHGLG00000034958	GYS2 (ENSHGLG00000016654) #24	ENSHGLG00000034379 #25	GOLT1B (ENSHGLG00000048680) #26	RECQL (ENSHGLG00000009712) #27	ENSHGLG00000010013 #29	ENSHGLG00000048919 #35	ENSHGLG00000017581	ENSHGLG00000011711 #31	ENSHGLG00000013677 #30	ENSHGLG00000005542 #35	SLCO1C1 (ENSHGLG00000005494) ##31	PDE3A (ENSHGLG00000009119)	AEBP2 (ENSHGLG00000017995)
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.a.d #35	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.c #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Guinea pig	MODERN SPECIES	28	SSPN (ENSCPOG00000033259)	ENSCPOG00000025122	RASSF8 (ENSCPOG00000033532) #7	KRAS (ENSCPOG00000030290) #10	ETFRF1 (ENSCPOG00000010713) #12	DNAI7 (ENSCPOG00000005699) #13	IRAG2 (ENSCPOG00000005690) #14	BCAT1 (ENSCPOG00000003203) #15	SOX5 (ENSCPOG00000015686) #16	ETNK1 (ENSCPOG00000007574) #17	C2CD5 (ENSCPOG00000002611) #18	ST8SIA1 (ENSCPOG00000037768) #19	ENSCPOG00000027285	CMAS (ENSCPOG00000000988) #20	ABCC9 (ENSCPOG00000011536) #21	KCNJ8 (ENSCPOG00000011535) #22	LDHB (ENSCPOG00000034968) ##23	GYS2 (ENSCPOG00000014642) #24	SPX (ENSCPOG00000014641) #25	GOLT1B (ENSCPOG00000034137) #26	RECQL (ENSCPOG00000024644) #27	PYROXD1 (ENSCPOG00000010730) #29	ENSCPOG00000007480 #35	ENSCPOG00000011248 #35	ENSCPOG00000009706	IAPP (ENSCPOG00000009711) #30	ENSCPOG00000030932	ENSCPOG00000026230 #35	SLCO1C1 (ENSCPOG00000005000) ##31	PDE3A (ENSCPOG00000011292)	AEBP2 (ENSCPOG00000007440)
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.a.d #35	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.c #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Long-tailed chinchilla	MODERN SPECIES	120	SSPN (ENSCLAG00000015681)	ENSCLAG00000015603	RASSF8 (ENSCLAG00000015615) #7	KRAS (ENSCLAG00000016519) #10	ETFRF1 (ENSCLAG00000016238) #12	DNAI7 (ENSCLAG00000017034) #13	IRAG2 (ENSCLAG00000015233) #14	BCAT1 (ENSCLAG00000016654) #15	SOX5 (ENSCLAG00000014641) #16	ETNK1 (ENSCLAG00000015907) #17	C2CD5 (ENSCLAG00000016952) #18	ST8SIA1 (ENSCLAG00000016736) #19	ENSCLAG00000015890	CMAS (ENSCLAG00000016228) #20	ABCC9 (ENSCLAG00000017154) #21	KCNJ8 (ENSCLAG00000016808) #22	LDHB (ENSCLAG00000016258) ##23	GYS2 (ENSCLAG00000016640) #24	SPX (ENSCLAG00000015491) #25	GOLT1B (ENSCLAG00000016474) #26	RECQL (ENSCLAG00000014618) #27	PYROXD1 (ENSCLAG00000014373) #29	ENSCLAG00000016286 #35	IAPP (ENSCLAG00000015413) #30	SLCO1A2 (ENSCLAG00000016340) #31	ENSCLAG00000016555 #35	SLCO1C1 (ENSCLAG00000016483) ##31	PDE3A (ENSCLAG00000015697)	AEBP2 (ENSCLAG00000014526)	PLEKHA5 (ENSCLAG00000015830)	CAPZA3 (ENSCLAG00000017894)
Degu	MODERN SPECIES	105	RASSF8 (ENSODEG00000010575) #7	LMNTD1 (ENSODEG00000009925) #8	KRAS (ENSODEG00000010412) #10	DNAI7 (ENSODEG00000009672) #13	IRAG2 (ENSODEG00000010644) #14	BCAT1 (ENSODEG00000009501) #15	ENSODEG00000010044	SOX5 (ENSODEG00000011773) #16	ETNK1 (ENSODEG00000011182) #17	ENSODEG00000010526	C2CD5 (ENSODEG00000010826) #18	ST8SIA1 (ENSODEG00000011649) #19	ENSODEG00000010288	ENSODEG00000019754 #20	ABCC9 (ENSODEG00000011228) #21	KCNJ8 (ENSODEG00000011130) #22	ENSODEG00000010887 ##23	GYS2 (ENSODEG00000012769) #24	SPX (ENSODEG00000010257) #25	ENSODEG00000009224 #26	RECQL (ENSODEG00000010240) #27	PYROXD1 (ENSODEG00000009681) #29	ENSODEG00000009060	Iapp (ENSODEG00000008908) #30	ENSODEG00000009392 #35	SLCO1C1 (ENSODEG00000009335) ##31	PDE3A (ENSODEG00000009924)
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b.f #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b.f #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Marmotini_b	ANCESTRAL SPECIES	57	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b.f #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Arctic ground squirrel	MODERN SPECIES	100	RASSF8 (ENSUPAG00010015858) #7	ENSUPAG00010015875 #8	KRAS (ENSUPAG00010015896) #10	ETFRF1 (ENSUPAG00010015915) #12	DNAI7 (ENSUPAG00010015919) #13	IRAG2 (ENSUPAG00010016042) #14	BCAT1 (ENSUPAG00010016309) #15	SOX5 (ENSUPAG00010016337) #16	ETNK1 (ENSUPAG00010016592) #17	ENSUPAG00010016617	C2CD5 (ENSUPAG00010016638) #18	ST8SIA1 (ENSUPAG00010017820) #19	ENSUPAG00010017832	CMAS (ENSUPAG00010017844) #20	ABCC9 (ENSUPAG00010017855) #21	KCNJ8 (ENSUPAG00010018390) #22
Squirrel	MODERN SPECIES	148	RASSF8 (ENSSTOG00000022027) #7	LMNTD1 (ENSSTOG00000005098) #8	ENSSTOG00000026226	KRAS (ENSSTOG00000009530) #10	ETFRF1 (ENSSTOG00000024945) #12	DNAI7 (ENSSTOG00000009509) #13	IRAG2 (ENSSTOG00000026727) #14	ENSSTOG00000004938 #15	SOX5 (ENSSTOG00000000100) #16	ETNK1 (ENSSTOG00000008379) #17	C2CD5 (ENSSTOG00000004906) #18	ST8SIA1 (ENSSTOG00000009654) #19	ENSSTOG00000022477	CMAS (ENSSTOG00000010303) #20	ABCC9 (ENSSTOG00000001507) #21	KCNJ8 (ENSSTOG00000001502) #22	ENSSTOG00000022058 ##23	GYS2 (ENSSTOG00000006383) #24	SPX (ENSSTOG00000006364) #25	GOLT1B (ENSSTOG00000006352) #26	RECQL (ENSSTOG00000006328) #27	PYROXD1 (ENSSTOG00000023758) #29	IAPP (ENSSTOG00000027273) #30	ENSSTOG00000003535 #31	ENSSTOG00000031927 #35	SLCO1C1 (ENSSTOG00000002270) ##31	PDE3A (ENSSTOG00000002257)	ENSSTOG00000031099	AEBP2 (ENSSTOG00000013380)	PLEKHA5 (ENSSTOG00000011009)	ENSSTOG00000031361
Alpin marmot	MODERN SPECIES	52	ENSMMMG00000018222	LMNTD1 (ENSMMMG00000018217) #8	KRAS (ENSMMMG00000018194) #10	ETFRF1 (ENSMMMG00000018182) #12	DNAI7 (ENSMMMG00000018140) #13	IRAG2 (ENSMMMG00000018125) #14	BCAT1 (ENSMMMG00000018101) #15	SOX5 (ENSMMMG00000018035) #16	ENSMMMG00000018020	ETNK1 (ENSMMMG00000017995) #17	C2CD5 (ENSMMMG00000017591) #18	ST8SIA1 (ENSMMMG00000017575) #19	ENSMMMG00000017562	CMAS (ENSMMMG00000017554) #20	ABCC9 (ENSMMMG00000016950) #21	KCNJ8 (ENSMMMG00000016941) #22	ENSMMMG00000016940	ENSMMMG00000016937 ##23	GYS2 (ENSMMMG00000016925) #24	SPX (ENSMMMG00000016909) #25	GOLT1B (ENSMMMG00000016903) #26	RECQL (ENSMMMG00000016879) #27	PYROXD1 (ENSMMMG00000016869) #29	IAPP (ENSMMMG00000016866) #30	SLCO1A2 (ENSMMMG00000016821) #31	ENSMMMG00000016797 #35	SLCO1C1 (ENSMMMG00000016753) ##31	PDE3A (ENSMMMG00000016739)	AEBP2 (ENSMMMG00000016719)	ENSMMMG00000016688	ENSMMMG00000016668
Eurasian red squirrel	MODERN SPECIES	14	RASSF8 (ENSSVLG00005013368) #7	LMNTD1 (ENSSVLG00005013266) #8	KRAS (ENSSVLG00005013177) #10	ETFRF1 (ENSSVLG00005013055) #12	DNAI7 (ENSSVLG00005012568) #13	ENSSVLG00005012187 #14	BCAT1 (ENSSVLG00005012012) #15	SOX5 (ENSSVLG00005011483) #16	ENSSVLG00005011366	ETNK1 (ENSSVLG00005011233) #17	C2CD5 (ENSSVLG00005011062) #18	ST8SIA1 (ENSSVLG00005010944) #19	ENSSVLG00005010892	CMAS (ENSSVLG00005010853) #20	ABCC9 (ENSSVLG00005022831) #21	KCNJ8 (ENSSVLG00005022746) #22	ENSSVLG00005022718 ##23	GYS2 (ENSSVLG00005022607) #24	SPX (ENSSVLG00005022543) #25	GOLT1B (ENSSVLG00005022464) #26	RECQL (ENSSVLG00005022407) #27	PYROXD1 (ENSSVLG00005022365) #29	ENSSVLG00005022328	SLCO1A2 (ENSSVLG00005022163) #31	ENSSVLG00005021498 #35	SLCO1C1 (ENSSVLG00005021232) ##31	ENSSVLG00005021192	ENSSVLG00005021157	PDE3A (ENSSVLG00005020997)	ENSSVLG00005020952	ENSSVLG00005020934
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Suina	ANCESTRAL SPECIES	4	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Chacoan peccary	MODERN SPECIES	901	BHLHE41 (ENSCWAG00000020451)	RASSF8 (ENSCWAG00000020442) #7	LMNTD1 (ENSCWAG00000020426) #8	KRAS (ENSCWAG00000020412) #10	ETFRF1 (ENSCWAG00000020390) #12	DNAI7 (ENSCWAG00000020143) #13	ENSCWAG00000019994 #14	BCAT1 (ENSCWAG00000019827) #15	SOX5 (ENSCWAG00000019638) #16	ETNK1 (ENSCWAG00000019545) #17	C2CD5 (ENSCWAG00000019218) #18	ST8SIA1 (ENSCWAG00000019183) #19	ENSCWAG00000019149	CMAS (ENSCWAG00000019111) #20	ABCC9 (ENSCWAG00000018465) #21	KCNJ8 (ENSCWAG00000018411) #22	ENSCWAG00000018403	ENSCWAG00000018379 ##23	GYS2 (ENSCWAG00000018301) #24	SPX (ENSCWAG00000018242) #25	GOLT1B (ENSCWAG00000018174) #26	RECQL (ENSCWAG00000018127) #27	PYROXD1 (ENSCWAG00000018077) #29	SLCO1A2 (ENSCWAG00000017926) #31	ENSCWAG00000017611 #35	SLCO1C1 (ENSCWAG00000017392) ##31	PDE3A (ENSCWAG00000017262)	AEBP2 (ENSCWAG00000017163)	PLEKHA5 (ENSCWAG00000016925)	CAPZA3 (ENSCWAG00000016896)	PLCZ1 (ENSCWAG00000016795)
Pig	MODERN SPECIES	13	LMNTD1 (ENSSSCG00000027144) #8	KRAS (ENSSSCG00000026969) #10	ETFRF1 (ENSSSCG00000033843) #12	DNAI7 (ENSSSCG00000040550) #13	ENSSSCG00000000563 #14	BCAT1 (ENSSSCG00000029163) #15	SOX5 (ENSSSCG00000000567) #16	ENSSSCG00000051791	ETNK1 (ENSSSCG00000039397) #17	C2CD5 (ENSSSCG00000000570) #18	ENSSSCG00000043201	ST8SIA1 (ENSSSCG00000031329) #19	ENSSSCG00000026594	CMAS (ENSSSCG00000034733) #20	ABCC9 (ENSSSCG00000000571) #21	KCNJ8 (ENSSSCG00000000573) #22	ENSSSCG00000038537	ENSSSCG00000000576 ##23	GYS2 (ENSSSCG00000000577) #24	SPX (ENSSSCG00000032123) #25	GOLT1B (ENSSSCG00000000579) #26	RECQL (ENSSSCG00000000580) #27	PYROXD1 (ENSSSCG00000000583) #29	ENSSSCG00000000582	SLCO1A2 (ENSSSCG00000000584) #31	ENSSSCG00000021998 #35	SLCO1C1 (ENSSSCG00000000585) ##31	PDE3A (ENSSSCG00000028662)	ENSSSCG00000045136	AEBP2 (ENSSSCG00000000587)	PLEKHA5 (ENSSSCG00000000588)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000155541.A	ENSGT00950000183119.b
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00940000159157.h	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000155541.A	ENSGT00950000183119.b
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00940000159157.h	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000155541.A	ENSGT00950000183119.b
Dolphin	MODERN SPECIES	77															ABCC9 (ENSTTRG00000017220) #21	KCNJ8 (ENSTTRG00000017218) #22
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00940000159157.h.a	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000155541.A	ENSGT00950000183119.b
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00940000159157.h.a	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000155541.A	ENSGT00950000183119.b
Narwhal	MODERN SPECIES	313	ETFRF1 (ENSMMNG00015016654) #12	DNAI7 (ENSMMNG00015016543) #13	ENSMMNG00015016354 #14	BCAT1 (ENSMMNG00015016154) #15	SOX5 (ENSMMNG00015015755) #16	ENSMMNG00015015600	ENSMMNG00015015589	ETNK1 (ENSMMNG00015015575) #17	ENSMMNG00015015522	C2CD5 (ENSMMNG00015015426) #18	ST8SIA1 (ENSMMNG00015015355) #19	ENSMMNG00015015346	ENSMMNG00015015332	CMAS (ENSMMNG00015015260) #20	ABCC9 (ENSMMNG00015015210) #21	KCNJ8 (ENSMMNG00015015180) #22	ENSMMNG00015015169 ##23	GYS2 (ENSMMNG00015015153) #24	SPX (ENSMMNG00015015132) #25	GOLT1B (ENSMMNG00015015109) #26	RECQL (ENSMMNG00015015079) #27	PYROXD1 (ENSMMNG00015015055) #29	ENSMMNG00015015042 #30	SLCO1A2 (ENSMMNG00015015027) #31	ENSMMNG00015015002 #35	SLCO1C1 (ENSMMNG00015014959) ##31	PDE3A (ENSMMNG00015014912)	ENSMMNG00015014878	ENSMMNG00015014869	AEBP2 (ENSMMNG00015014840)	ENSMMNG00015014818
Beluga whale	MODERN SPECIES	23	LMNTD1 (ENSDLEG00000009367) #8	ENSDLEG00000009332 #10	ETFRF1 (ENSDLEG00000009294) #12	DNAI7 (ENSDLEG00000009247) #13	IRAG2 (ENSDLEG00000009161) #14	BCAT1 (ENSDLEG00000009143) #15	SOX5 (ENSDLEG00000008971) #16	ENSDLEG00000008908	ENSDLEG00000008898	ETNK1 (ENSDLEG00000008827) #17	C2CD5 (ENSDLEG00000008392) #18	ST8SIA1 (ENSDLEG00000008301) #19	ENSDLEG00000002913	CMAS (ENSDLEG00000002810) #20	ABCC9 (ENSDLEG00000002785) #21	KCNJ8 (ENSDLEG00000002776) #22	LDHB (ENSDLEG00000002771) ##23	GYS2 (ENSDLEG00000002738) #24	ENSDLEG00000002731 #25	GOLT1B (ENSDLEG00000002726) #26	RECQL (ENSDLEG00000002715) #27	PYROXD1 (ENSDLEG00000002705) #29	ENSDLEG00000002676 #30	SLCO1A2 (ENSDLEG00000002660) #31	ENSDLEG00000002643 #35	SLCO1C1 (ENSDLEG00000002612) ##31	PDE3A (ENSDLEG00000002600)	AEBP2 (ENSDLEG00000002563)	COMMD7 (ENSDLEG00000002552)	PLEKHA5 (ENSDLEG00000002451)	MRFAP1L1 (ENSDLEG00000002428)
Vaquita	MODERN SPECIES	1	ETFRF1 (ENSPSNG00000007433) #12	DNAI7 (ENSPSNG00000007486) #13	ENSPSNG00000007613 #14	BCAT1 (ENSPSNG00000008000) #15	SOX5 (ENSPSNG00000008185) #16	SH3BGRL2 (ENSPSNG00000008477)	ENSPSNG00000008505	ETNK1 (ENSPSNG00000008531) #17	ENSPSNG00000008610	C2CD5 (ENSPSNG00000008702) #18	ST8SIA1 (ENSPSNG00000008830) #19	ENSPSNG00000008876	ENSPSNG00000008896	CMAS (ENSPSNG00000008934) #20	ABCC9 (ENSPSNG00000009009) #21	ENSPSNG00000009115 #22	ENSPSNG00000009127 ##23	GYS2 (ENSPSNG00000009168) #24	ENSPSNG00000009281 #25	GOLT1B (ENSPSNG00000009388) #26	RECQL (ENSPSNG00000009558) #27	PYROXD1 (ENSPSNG00000009598) #29	ENSPSNG00000009678 #30	SLCO1A2 (ENSPSNG00000009729) #31	ENSPSNG00000009973 #35	SLCO1C1 (ENSPSNG00000010173) ##31	PDE3A (ENSPSNG00000010466)	AEBP2 (ENSPSNG00000010697)	PLEKHA5 (ENSPSNG00000011110)	ENSPSNG00000011273	MRFAP1L1 (ENSPSNG00000004166)
Sperm whale	MODERN SPECIES	17	KRAS (ENSPCTG00005019457) #10	ETFRF1 (ENSPCTG00005019366) #12	CASC1 (ENSPCTG00005018863) #13	LRMP (ENSPCTG00005018385) #14	BCAT1 (ENSPCTG00005018026) #15	ENSPCTG00005017984	SOX5 (ENSPCTG00005017662) #16	ENSPCTG00005017626	ENSPCTG00005017598	ETNK1 (ENSPCTG00005017509) #17	ENSPCTG00005017475	C2CD5 (ENSPCTG00005017129) #18	ST8SIA1 (ENSPCTG00005017030) #19	CMAS (ENSPCTG00005016960) #20	ABCC9 (ENSPCTG00005015979) #21	KCNJ8 (ENSPCTG00005015904) #22	LDHB (ENSPCTG00005015827) ##23	GYS2 (ENSPCTG00005015623) #24	SPX (ENSPCTG00005015506) #25	GOLT1B (ENSPCTG00005015363) #26	RECQL (ENSPCTG00005015278) #27	PYROXD1 (ENSPCTG00005015198) #29	ENSPCTG00005015135	SLCO1A2 (ENSPCTG00005014803) #31	ENSPCTG00005014634 #35	SLCO1C1 (ENSPCTG00005014285) ##31	ENSPCTG00005014253	PDE3A (ENSPCTG00005014024)	AEBP2 (ENSPCTG00005013775)	ENSPCTG00005013693	PLEKHA5 (ENSPCTG00005013346)
Blue whale	MODERN SPECIES	1	RASSF8 (ENSBMSG00010011482) #7	ENSBMSG00010011471	KRAS (ENSBMSG00010011390) #10	ETFRF1 (ENSBMSG00010011375) #12	DNAI7 (ENSBMSG00010011160) #13	ENSBMSG00010011021 #14	BCAT1 (ENSBMSG00010008970) #15	SOX5 (ENSBMSG00010008849) #16	ENSBMSG00010008806	ETNK1 (ENSBMSG00010008756) #17	C2CD5 (ENSBMSG00010008399) #18	ST8SIA1 (ENSBMSG00010008290) #19	ENSBMSG00010008282	CMAS (ENSBMSG00010008269) #20	ABCC9 (ENSBMSG00010008195) #21	KCNJ8 (ENSBMSG00010008158) #22	ENSBMSG00010008151 ##23	GYS2 (ENSBMSG00010008130) #24	SPX (ENSBMSG00010008118) #25	ENSBMSG00010008107 #26	RECQL (ENSBMSG00010008090) #27	PYROXD1 (ENSBMSG00010008080) #29	ENSBMSG00010008069	ENSBMSG00010008064	SLCO1A2 (ENSBMSG00010008040) #31	ENSBMSG00010007994 #35	SLCO1C1 (ENSBMSG00010007964) ##31	PDE3A (ENSBMSG00010007943)	ENSBMSG00010007926	AEBP2 (ENSBMSG00010007892)	PLEKHA5 (ENSBMSG00010007809)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.g #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a.o #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.m ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.g #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Bos	ANCESTRAL SPECIES	2	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a.o #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.m ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.g #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Bos_a	ANCESTRAL SPECIES	3	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a.o #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.m ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.h.a.b #26	ENSGT00390000014507.a.g #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Domestic yak	MODERN SPECIES	24	ENSBGRG00000001511	DNAI7 (ENSBGRG00000001323) #13	IRAG2 (ENSBGRG00000001276) #14	ENSBGRG00000001086 #15	SOX5 (ENSBGRG00000000530) #16	ENSBGRG00000000454	ETNK1 (ENSBGRG00000000417) #17	C2CD5 (ENSBGRG00000000306) #18	ENSBGRG00000003697	ENSBGRG00000003680	ENSBGRG00000003669	ST8SIA1 (ENSBGRG00000003643) #19	ENSBGRG00000003609	CMAS (ENSBGRG00000003597) #20	ABCC9 (ENSBGRG00000003543) #21	KCNJ8 (ENSBGRG00000003524) #22	ENSBGRG00000003482 ##23	GYS2 (ENSBGRG00000003443) #24	SPX (ENSBGRG00000003414) #25	GOLT1B (ENSBGRG00000003380) #26	RECQL (ENSBGRG00000003337) #27	PYROXD1 (ENSBGRG00000003299) #29	ENSBGRG00000003285	SLCO1A2 (ENSBGRG00000003238) #31	ENSBGRG00000003165 #35	SLCO1C1 (ENSBGRG00000003132) ##31	PDE3A (ENSBGRG00000003042)	ENSBGRG00000003028	ENSBGRG00000003019	AEBP2 (ENSBGRG00000002969)	PLEKHA5 (ENSBGRG00000002854)
Wild yak	MODERN SPECIES	547	ENSBMUG00000005188	ENSBMUG00000005169	YRDC (ENSBMUG00000005165)	ENSBMUG00000005151	MTF1 (ENSBMUG00000005144)	INPP5B (ENSBMUG00000005113)	SF3A3 (ENSBMUG00000004990)	FHL3 (ENSBMUG00000004966)	UTP11 (ENSBMUG00000004947)	RRAGC (ENSBMUG00000004925)	ENSBMUG00000004917	ST8SIA1 (ENSBMUG00000004913) #19	ENSBMUG00000004904	CMAS (ENSBMUG00000004876) #20	ABCC9 (ENSBMUG00000004814) #21	KCNJ8 (ENSBMUG00000004645) #22	ENSBMUG00000004639 ##23	GYS2 (ENSBMUG00000004253) #24	ENSBMUG00000003816	ENSBMUG00000003792	GOLT1B (ENSBMUG00000003768) #26	RECQL (ENSBMUG00000003712) #27	PYROXD1 (ENSBMUG00000003683) #29	ENSBMUG00000003655	SLCO1A2 (ENSBMUG00000003614) #31	ENSBMUG00000003566 #35	SLCO1C1 (ENSBMUG00000003527) ##31	PDE3A (ENSBMUG00000003446)	AEBP2 (ENSBMUG00000003397)	PLEKHA5 (ENSBMUG00000003331)
Bos_b	ANCESTRAL SPECIES	22	ENSGT00910000144343 #8	ENSGT00530000063539.b.lb.a	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a.o #15	ENSGT00940000156122 #16	ENSGT00940000154152.d.b.h.a.b	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.m ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.g #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005029563 #8	ENSBIXG00005029548	KRAS (ENSBIXG00005029534) #10	ETFRF1 (ENSBIXG00005029501) #12	DNAI7 (ENSBIXG00005029450) #13	IRAG2 (ENSBIXG00005029377) #14	ENSBIXG00005029312 #15	ENSBIXG00005007855	SOX5 (ENSBIXG00005007922) #16	ETNK1 (ENSBIXG00005007986) #17	C2CD5 (ENSBIXG00005008163) #18	ST8SIA1 (ENSBIXG00005008238) #19	ENSBIXG00005008258	CMAS (ENSBIXG00005008273) #20	ABCC9 (ENSBIXG00005005898) #21	KCNJ8 (ENSBIXG00005005900) #22	ENSBIXG00005000172 ##23	GYS2 (ENSBIXG00005008369) #24	SPX (ENSBIXG00005008381) #25	GOLT1B (ENSBIXG00005000177) #26	RECQL (ENSBIXG00005008417) #27	PYROXD1 (ENSBIXG00005008427) #29	ENSBIXG00005008439	ENSBIXG00005008449	SLCO1A2 (ENSBIXG00005008465) #31	ENSBIXG00005008487 #35	SLCO1C1 (ENSBIXG00005008517) ##31	ENSBIXG00005008530	PDE3A (ENSBIXG00005008578)	ENSBIXG00005008594	AEBP2 (ENSBIXG00005000239)
Cow	MODERN SPECIES	24	LMNTD1 (ENSBTAG00000000749) #8	ENSBTAG00000055210	KRAS (ENSBTAG00000009778) #10	ETFRF1 (ENSBTAG00000026624) #12	DNAI7 (ENSBTAG00000002972) #13	IRAG2 (ENSBTAG00000019711) #14	BCAT1 (ENSBTAG00000013825) #15	SOX5 (ENSBTAG00000022360) #16	ENSBTAG00000004109	ETNK1 (ENSBTAG00000005833) #17	C2CD5 (ENSBTAG00000001673) #18	ST8SIA1 (ENSBTAG00000000593) #19	ENSBTAG00000026611	CMAS (ENSBTAG00000010136) #20	ABCC9 (ENSBTAG00000019294) #21	KCNJ8 (ENSBTAG00000002551) #22	LDHB (ENSBTAG00000019603) ##23	GYS2 (ENSBTAG00000013333) #24	SPX (ENSBTAG00000053951) #25	GOLT1B (ENSBTAG00000000379) #26	RECQL (ENSBTAG00000021083) #27	PYROXD1 (ENSBTAG00000021078) #29	IAPP (ENSBTAG00000010530) #30	SLCO1A2 (ENSBTAG00000003282) #31	SLCO1B3 (ENSBTAG00000022329) #35	SLCO1C1 (ENSBTAG00000019602) ##31	PDE3A (ENSBTAG00000017260)	ENSBTAG00000050454	AEBP2 (ENSBTAG00000010818)	PLEKHA5 (ENSBTAG00000017571)	CAPZA3 (ENSBTAG00000013207)
American bison	MODERN SPECIES	3284	ENSBBBG00000010575 #8	ENSBBBG00000010578	KRAS (ENSBBBG00000010586) #10	ENSBBBG00000001854	DNAI7 (ENSBBBG00000001867) #13	IRAG2 (ENSBBBG00000010696) #14	ENSBBBG00000010741 #15	SOX5 (ENSBBBG00000010795) #16	ETNK1 (ENSBBBG00000010821) #17	C2CD5 (ENSBBBG00000011064) #18	ENSBBBG00000011091	ST8SIA1 (ENSBBBG00000011097) #19	ENSBBBG00000011102	CMAS (ENSBBBG00000011109) #20	ABCC9 (ENSBBBG00000002026) #21	KCNJ8 (ENSBBBG00000011200) #22	ENSBBBG00000011210 ##23	GYS2 (ENSBBBG00000007541) #24	SPX (ENSBBBG00000011238) #25	GOLT1B (ENSBBBG00000011257) #26	RECQL (ENSBBBG00000011291) #27	PYROXD1 (ENSBBBG00000011307) #29	ENSBBBG00000011315	SLCO1A2 (ENSBBBG00000011337) #31	ENSBBBG00000011351 #35	SLCO1C1 (ENSBBBG00000011379) ##31	PDE3A (ENSBBBG00000002016)	AEBP2 (ENSBBBG00000002084)	PLEKHA5 (ENSBBBG00000011510)	CAPZA3 (ENSBBBG00000008490)	PLCZ1 (ENSBBBG00000011547)
Caprinae	ANCESTRAL SPECIES		ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a.k ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a.h.a.b #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00940000169914	ENSGT00510000048519
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020003591	KRAS (ENSOARG00020003619) #10	ENSOARG00020003693	CASC1 (ENSOARG00020003767) #13	IRAG2 (ENSOARG00020004466) #14	BCAT1 (ENSOARG00020004542) #15	ENSOARG00020004905 #13	SOX5 (ENSOARG00020004965) #16	ETNK1 (ENSOARG00020005297) #17	C2CD5 (ENSOARG00020005387) #18	ST8SIA1 (ENSOARG00020006095) #19	ENSOARG00020006121	CMAS (ENSOARG00020006141) #20	ABCC9 (ENSOARG00020006172) #21	ENSOARG00020006234	KCNJ8 (ENSOARG00020006255) #22	ENSOARG00020006271 ##23	GYS2 (ENSOARG00020006324) #24	SPX (ENSOARG00020006489) #25	ENSOARG00020000106 #26	RECQL (ENSOARG00020000191) #27	PYROXD1 (ENSOARG00020000359) #29	ENSOARG00020000389	SLCO1A2 (ENSOARG00020000409) #31	ENSOARG00020000442 #35	SLCO1C1 (ENSOARG00020000522) ##31	PDE3A (ENSOARG00020000569)	ENSOARG00020000628	AEBP2 (ENSOARG00020000679)	ENSOARG00020000783	PLEKHA5 (ENSOARG00020000915)
Goat	MODERN SPECIES	24	KRAS (ENSCHIG00000026575) #10	ETFRF1 (ENSCHIG00000023135) #12	DNAI7 (ENSCHIG00000016268) #13	IRAG2 (ENSCHIG00000006732) #14	ENSCHIG00000000786	BCAT1 (ENSCHIG00000025125) #15	SOX5 (ENSCHIG00000026249) #16	ENSCHIG00000003098	ETNK1 (ENSCHIG00000010576) #17	C2CD5 (ENSCHIG00000011005) #18	ENSCHIG00000010485	ST8SIA1 (ENSCHIG00000022129) #19	ENSCHIG00000015874	CMAS (ENSCHIG00000003246) #20	ABCC9 (ENSCHIG00000026713) #21	KCNJ8 (ENSCHIG00000023544) #22	ENSCHIG00000010543 ##23	GYS2 (ENSCHIG00000020166) #24	SPX (ENSCHIG00000014173) #25	ENSCHIG00000026904 #26	RECQL (ENSCHIG00000024281) #27	PYROXD1 (ENSCHIG00000020769) #29	SLCO1A2 (ENSCHIG00000018048) #31	IAPP (ENSCHIG00000014669) #30	ENSCHIG00000006897 #35	SLCO1C1 (ENSCHIG00000025928) ##31	PDE3A (ENSCHIG00000025590)	ENSCHIG00000025977	ENSCHIG00000016818	AEBP2 (ENSCHIG00000025547)	PLEKHA5 (ENSCHIG00000022500)
Siberian musk deer	MODERN SPECIES	1250	LMNTD1 (ENSMMSG00000023821) #8	ENSMMSG00000023815	KRAS (ENSMMSG00000023808) #10	ETFRF1 (ENSMMSG00000023803) #12	DNAI7 (ENSMMSG00000023707) #13	IRAG2 (ENSMMSG00000023682) #14	BCAT1 (ENSMMSG00000023666) #15	ENSMMSG00000023659	SOX5 (ENSMMSG00000023587) #16	ETNK1 (ENSMMSG00000023565) #17	C2CD5 (ENSMMSG00000023482) #18	ST8SIA1 (ENSMMSG00000023452) #19	ENSMMSG00000023442	CMAS (ENSMMSG00000023434) #20	ABCC9 (ENSMMSG00000023417) #21	KCNJ8 (ENSMMSG00000023397) #22	ENSMMSG00000023385 ##23	GYS2 (ENSMMSG00000023372) #24	SPX (ENSMMSG00000023361) #25	GOLT1B (ENSMMSG00000023349) #26	RECQL (ENSMMSG00000023332) #27	PYROXD1 (ENSMMSG00000023323) #29	IAPP (ENSMMSG00000023315) #30	SLCO1A2 (ENSMMSG00000023288) #31	ENSMMSG00000023253 #35	SLCO1C1 (ENSMMSG00000023215) ##31	PDE3A (ENSMMSG00000023193)	ENSMMSG00000023176	ENSMMSG00000023170	AEBP2 (ENSMMSG00000023141)	ENSMMSG00000022620
Yarkand deer	MODERN SPECIES	14	ENSCHYG00000012342	KRAS (ENSCHYG00000012381) #10	ENSCHYG00000012493	DNAI7 (ENSCHYG00000012592) #13	IRAG2 (ENSCHYG00000013072) #14	BCAT1 (ENSCHYG00000013194) #15	ENSCHYG00000013570	ENSCHYG00000013698	SOX5 (ENSCHYG00000013787) #16	ETNK1 (ENSCHYG00000014267) #17	C2CD5 (ENSCHYG00000014543) #18	ST8SIA1 (ENSCHYG00000015995) #19	ENSCHYG00000016113	CMAS (ENSCHYG00000016199) #20	ABCC9 (ENSCHYG00000016336) #21	KCNJ8 (ENSCHYG00000017377) #22	ENSCHYG00000017410 ##23	GYS2 (ENSCHYG00000017490) #24	ENSCHYG00000017860 #25	GOLT1B (ENSCHYG00000018024) #26	RECQL (ENSCHYG00000018305) #27	PYROXD1 (ENSCHYG00000018415) #29	ENSCHYG00000018573	SLCO1A2 (ENSCHYG00000018650) #31	ENSCHYG00000018778 #35	SLCO1C1 (ENSCHYG00000019051) ##31	PDE3A (ENSCHYG00000019381)	ENSCHYG00000019562	AEBP2 (ENSCHYG00000019669)	ENSCHYG00000020110	CAPZA3 (ENSCHYG00000021079)
Camelidae	ANCESTRAL SPECIES	17	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00940000173162	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Arabian camel	MODERN SPECIES	27	BHLHE41 (ENSCDRG00005009146)	RASSF8 (ENSCDRG00005009008) #7	LMNTD1 (ENSCDRG00005020127) #8	KRAS (ENSCDRG00005020107) #10	ETFRF1 (ENSCDRG00005020089) #12	DNAI7 (ENSCDRG00005020024) #13	ENSCDRG00005019915 #14	BCAT1 (ENSCDRG00005019573) #15	SOX5 (ENSCDRG00005019208) #16	ETNK1 (ENSCDRG00005019130) #17	C2CD5 (ENSCDRG00005018969) #18	ST8SIA1 (ENSCDRG00005018909) #19	ENSCDRG00005018878	CMAS (ENSCDRG00005018843) #20	ABCC9 (ENSCDRG00005018701) #21	KCNJ8 (ENSCDRG00005018658) #22	ENSCDRG00005018635 ##23	GYS2 (ENSCDRG00005018625) #24	ENSCDRG00005018598	GOLT1B (ENSCDRG00005018507) #26	RECQL (ENSCDRG00005018445) #27	PYROXD1 (ENSCDRG00005018382) #29	IAPP (ENSCDRG00005018365) #30	SLCO1A2 (ENSCDRG00005018304) #31	ENSCDRG00005018230 #35	SLCO1C1 (ENSCDRG00005018188) ##31	PDE3A (ENSCDRG00005018118)	AEBP2 (ENSCDRG00005017999)	PLEKHA5 (ENSCDRG00005016906)	ENSCDRG00005016780	CAPZA3 (ENSCDRG00005016771)
Alpaca	MODERN SPECIES	119												C2CD5 (ENSVPAG00000007558) #18	ST8SIA1 (ENSVPAG00000007556) #19	CMAS (ENSVPAG00000007554) #20	ABCC9 (ENSVPAG00000007552) #21	KCNJ8 (ENSVPAG00000007551) #22	ENSVPAG00000007550 ##23	GYS2 (ENSVPAG00000007549) #24	GOLT1B (ENSVPAG00000007548) #26	RECQL (ENSVPAG00000007546) #27	PYROXD1 (ENSVPAG00000007545) #29
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Carnivora	ANCESTRAL SPECIES	3	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b	ENSGT00940000154651.j.a.b.a.b.a	ENSGT00940000154651.j.a.b.a.b.b.a	ENSGT00940000154651.j.a.b.a.a.a.a	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Caniformia	ANCESTRAL SPECIES	19	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a	ENSGT00940000154651.j.a.b.a.b.b.a.a	ENSGT00940000154651.j.a.b.b	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT01030000234874
Canidae	ANCESTRAL SPECIES	8	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00940000160340.c.c.b.b	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.c.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a	ENSGT00950000185078	ENSGT00940000154651.j.a.a	ENSGT00940000154651.j.a.b.a.a.b	ENSGT00940000154651.j.a.b.a.b.b.a.b	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00940000160340.c.c.b.b	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.c.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a	ENSGT00950000185078.a	ENSGT00940000154651.j.a.a	ENSGT00940000154651.j.a.b.a.a.b	ENSGT00940000154191.i.b.o.a.a	ENSGT00940000154651.j.a.b.a.b.b.a.b.a	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00390000014894 #29	ENSGT00940000155120.lb.a.b.a
Dog	MODERN SPECIES	19	LMNTD1 (ENSCAFG00845026629) #8	KRAS (ENSCAFG00845026771) #10	ETFRF1 (ENSCAFG00845012920) #12	DNAI7 (ENSCAFG00845013037) #13	LRMP (ENSCAFG00845013359) #14	ENSCAFG00845013478	BCAT1 (ENSCAFG00845013534) #15	SOX5 (ENSCAFG00845013678) #16	ENSCAFG00845013792	ETNK1 (ENSCAFG00845013814) #17	C2CD5 (ENSCAFG00845013960) #18	ST8SIA1 (ENSCAFG00845014219) #19	ENSCAFG00845014274	CMAS (ENSCAFG00845014299) #20	ABCC9 (ENSCAFG00845014429) #21	KCNJ8 (ENSCAFG00845014663) #22	LDHB (ENSCAFG00845014696) ##23	GYS2 (ENSCAFG00845014730) #24	SPX (ENSCAFG00845014813) #26	RECQL (ENSCAFG00845014911) #27	ENSCAFG00845014941	ENSCAFG00845014954	ENSCAFG00845014977	ENSCAFG00845014995	ENSCAFG00845015010	ENSCAFG00845015062	ENSCAFG00845015086	ENSCAFG00845015116	ENSCAFG00845015151	ENSCAFG00845015167	ENSCAFG00845015202
Dingo	MODERN SPECIES	295	ETFRF1 (ENSCAFG00020012787) #12	DNAI7 (ENSCAFG00020012784) #13	IRAG2 (ENSCAFG00020012771) #14	ENSCAFG00020012764	BCAT1 (ENSCAFG00020012762) #15	ENSCAFG00020012732 #16	ENSCAFG00020012707 #16	ENSCAFG00020012702	ETNK1 (ENSCAFG00020012685) #17	C2CD5 (ENSCAFG00020012652) #18	ENSCAFG00020012638	ST8SIA1 (ENSCAFG00020012635) #19	ENSCAFG00020012631	CMAS (ENSCAFG00020012628) #20	ABCC9 (ENSCAFG00020008129) #21	KCNJ8 (ENSCAFG00020007921) #22	ENSCAFG00020007914 ##23	GYS2 (ENSCAFG00020007893) #24	SPX (ENSCAFG00020007887) #25	GOLT1B (ENSCAFG00020007884) #26	RECQL (ENSCAFG00020007872) #27	ENSCAFG00020007859	ENSCAFG00020007855	ENSCAFG00020007847	ENSCAFG00020007827	ENSCAFG00020007816	ENSCAFG00020007805	ENSCAFG00020007798	ENSCAFG00020007794	ENSCAFG00020007774	ENSCAFG00020007757 #29
Red fox	MODERN SPECIES	18	LMNTD1 (ENSVVUG00000030344) #8	ENSVVUG00000030345 #10	ETFRF1 (ENSVVUG00000030346) #12	DNAI7 (ENSVVUG00000030347) #13	IRAG2 (ENSVVUG00000030348) #14	ENSVVUG00000030351	BCAT1 (ENSVVUG00000030352) #15	SOX5 (ENSVVUG00000000151) #16	ENSVVUG00000000296	ETNK1 (ENSVVUG00000000469) #17	C2CD5 (ENSVVUG00000000688) #18	ST8SIA1 (ENSVVUG00000000809) #19	ENSVVUG00000000816	CMAS (ENSVVUG00000000839) #20	ABCC9 (ENSVVUG00000000871) #21	KCNJ8 (ENSVVUG00000001060) #22	ENSVVUG00000001066 ##23	GYS2 (ENSVVUG00000001073) #24	SPX (ENSVVUG00000001077) #25	GOLT1B (ENSVVUG00000001090) #26	RECQL (ENSVVUG00000001101) #27	ENSVVUG00000001133	ENSVVUG00000001142	ENSVVUG00000001160	ENSVVUG00000001166	ENSVVUG00000001181	ENSVVUG00000001191	ENSVVUG00000001196	ENSVVUG00000001218	ENSVVUG00000001237	ENSVVUG00000001243
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.a.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a	ENSGT00940000154651.j.a.b.a.b.b.a.a	ENSGT00940000154651.j.a.b.b	ENSGT00940000154651.j.a.b.a.a.a.a	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628
Mustelinae	ANCESTRAL SPECIES	93	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a.b #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.a.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a.c.a	ENSGT00940000162982	ENSGT00730000111305	ENSGT00390000018491	ENSGT00940000154471.a.b.a.b	ENSGT00940000155765	ENSGT00940000155504	ENSGT00390000013709.b	ENSGT00940000158677	ENSGT00940000158899
American mink	MODERN SPECIES	96	RASSF8 (ENSNVIG00000001234) #7	LMNTD1 (ENSNVIG00000001215) #8	RASK (ENSNVIG00000001175) #10	ETFRF1 (ENSNVIG00000001147) #12	DNAI7 (ENSNVIG00000000988) #13	IRAG2 (ENSNVIG00000000935) #14	Q68DQ7 (ENSNVIG00000000861) #15	SOX5 (ENSNVIG00000000784) #16	ENSNVIG00000000776	ETNK1 (ENSNVIG00000000767) #17	C2CD5 (ENSNVIG00000000073) #18	ST8SIA1 (ENSNVIG00000020524) #19	ENSNVIG00000020517	CMAS (ENSNVIG00000020500) #20	ABCC9 (ENSNVIG00000020358) #21	IRK8 (ENSNVIG00000020347) #22	ENSNVIG00000020311 ##23	GYS2 (ENSNVIG00000020281) #24	SPX (ENSNVIG00000020259) #25	GOT1B (ENSNVIG00000020237) #26	RECQL (ENSNVIG00000020208) #27	ENSNVIG00000020200	ENSNVIG00000020194	ETFBKMT (ENSNVIG00000020182)	AMN1 (ENSNVIG00000020130)
Ferret	MODERN SPECIES	327															ABCC9 (ENSMPUG00000000167) #21	KCNJ8 (ENSMPUG00000000170) #22	ENSMPUG00000018807	ENSMPUG00000000171	ENSMPUG00000000172 ##23	GYS2 (ENSMPUG00000000192) #24	SPX (ENSMPUG00000000196) #25	GOLT1B (ENSMPUG00000000198) #26	RECQL (ENSMPUG00000000202) #27	ENSMPUG00000000207	ETFBKMT (ENSMPUG00000000211)	AMN1 (ENSMPUG00000000213)	RESF1 (ENSMPUG00000000215)	BICD1 (ENSMPUG00000000217)	FGD4 (ENSMPUG00000000219)	DNM1L (ENSMPUG00000000222)	YARS2 (ENSMPUG00000000223)
Ursidae	ANCESTRAL SPECIES	25	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.a.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a.a.a.a.a	ENSGT00940000154651.j.a.b.a.b.b.a.a.d	ENSGT00940000154651.j.a.b.a.b.b.b.a.a.a.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00940000154651.j.a.b.a.b.a	ENSGT00940000154651.j.a.b.a.b.b.a.b	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.a.a.a	ENSGT00390000014894 #29	ENSGT00510000048671 #30
Ursus	ANCESTRAL SPECIES	155	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000185059	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h.a.b ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b.a.a.a.a.a	ENSGT00940000154651.j.a.b.a.b.b.b.a.a.a.a.b	ENSGT00940000154651.j.a.b.b
American black bear	MODERN SPECIES	7086																KCNJ8 (ENSUAMG00000024143) #22	ENSUAMG00000024145
Polar bear	MODERN SPECIES	182	RASSF8 (ENSUMAG00000003293) #7	KRAS (ENSUMAG00000003274) #10	ETFRF1 (ENSUMAG00000003271) #12	DNAI7 (ENSUMAG00000003217) #13	IRAG2 (ENSUMAG00000003170) #14	BCAT1 (ENSUMAG00000003124) #15	ENSUMAG00000003043 #16	ENSUMAG00000002956 #16	ENSUMAG00000002938	ETNK1 (ENSUMAG00000002922) #17	C2CD5 (ENSUMAG00000001993) #18	ST8SIA1 (ENSUMAG00000001743) #19	ENSUMAG00000001739	CMAS (ENSUMAG00000001709) #20	ABCC9 (ENSUMAG00000001657) #21	KCNJ8 (ENSUMAG00000001648) #22	ENSUMAG00000001639	ENSUMAG00000001629 ##23	GYS2 (ENSUMAG00000001564) #24	SPX (ENSUMAG00000001540) #25	GOLT1B (ENSUMAG00000001530) #26	RECQL (ENSUMAG00000001523) #27	ENSUMAG00000001515	ENSUMAG00000001506	ENSUMAG00000001482	ENSUMAG00000001473	ENSUMAG00000001459
Giant Panda	MODERN SPECIES	7	SSPN (ENSAMEG00000011902)	BHLHE41 (ENSAMEG00000030378)	RASSF8 (ENSAMEG00000011910) #7	ENSAMEG00000007529 #10	ETFRF1 (ENSAMEG00000030820) #12	DNAI7 (ENSAMEG00000007559) #13	IRAG2 (ENSAMEG00000007590) #14	BCAT1 (ENSAMEG00000007615) #15	SOX5 (ENSAMEG00000007732) #16	ETNK1 (ENSAMEG00000007754) #17	C2CD5 (ENSAMEG00000007770) #18	ST8SIA1 (ENSAMEG00000007885) #19	ENSAMEG00000007911	CMAS (ENSAMEG00000007936) #20	ABCC9 (ENSAMEG00000016153) #21	KCNJ8 (ENSAMEG00000027736) #22	ENSAMEG00000016175 ##23	GYS2 (ENSAMEG00000016198) #24	SPX (ENSAMEG00000016229) #25	GOLT1B (ENSAMEG00000016231) #26	RECQL (ENSAMEG00000016233) #27	ENSAMEG00000025559	ENSAMEG00000031273	ENSAMEG00000025590	ENSAMEG00000028332	ENSAMEG00000025966	ENSAMEG00000026976	ENSAMEG00000026078	ENSAMEG00000029068	PYROXD1 (ENSAMEG00000000886) #29	IAPP (ENSAMEG00000000901) #30
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b	ENSGT00940000154651.j.a.b.a.b.a.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.a.a.b	ENSGT00390000009405.b.n.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00940000154651.j.a.b.a.a.b	ENSGT00940000154651.j.a.a.a	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.b.a
Panthera	ANCESTRAL SPECIES		ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00390000006621.p.b	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b	ENSGT00940000154651.j.a.b.a.b.a.a.a.a.a	ENSGT00940000154651.j.a.b.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.a.a.b	ENSGT00390000009405.b.n.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00940000154651.j.a.b.a.a.b	ENSGT00940000154651.j.a.a.a	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.b.a
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00390000006621.p.b	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00940000154651.j.a.b.a.b.b.b	ENSGT00940000154651.j.a.b.a.b.a.a.a.a.a	ENSGT00940000154651.j.a.b.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.a.a.b	ENSGT00390000009405.b.n.a.b	ENSGT00940000154651.j.a.b.b	ENSGT00940000154651.j.a.b.a.a.b	ENSGT00940000154651.j.a.a.a	ENSGT00940000154651.j.a.b.a.a.a.b	ENSGT00940000154651.j.a.b.a.b.b.a
leopard	MODERN SPECIES	22	ENSPPRG00000021326	KRAS (ENSPPRG00000007389) #10	ETFRF1 (ENSPPRG00000008544) #12	DNAI7 (ENSPPRG00000009751) #13	IRAG2 (ENSPPRG00000011474) #14	BCAT1 (ENSPPRG00000014007) #15	ENSPPRG00000015924	ENSPPRG00000024478 #16	ETNK1 (ENSPPRG00000023960) #17	C2CD5 (ENSPPRG00000003405) #18	ENSPPRG00000021807	ST8SIA1 (ENSPPRG00000003913) #19	ENSPPRG00000004010	CMAS (ENSPPRG00000004115) #20	ABCC9 (ENSPPRG00000007122) #21	KCNJ8 (ENSPPRG00000007195) #22	ENSPPRG00000007295 ##23	GYS2 (ENSPPRG00000007651) #24	SPX (ENSPPRG00000007920) #25	GOLT1B (ENSPPRG00000010001) #26	RECQL (ENSPPRG00000010371) #27	ENSPPRG00000010399	ENSPPRG00000022127	ENSPPRG00000011457	ENSPPRG00000022168	ENSPPRG00000011625	PYROXD1 (ENSPPRG00000011988) #29	ENSPPRG00000012868	IAPP (ENSPPRG00000012980) #30	SLCO1A2 (ENSPPRG00000013348) #31	ENSPPRG00000021826 #35
lion	MODERN SPECIES	7	BHLHE41 (ENSPLOG00000013781)	RASSF8 (ENSPLOG00000013701) #7	LMNTD1 (ENSPLOG00000013503) #8	KRAS (ENSPLOG00000013375) #10	ETFRF1 (ENSPLOG00000013319) #12	DNAI7 (ENSPLOG00000012922) #13	IRAG2 (ENSPLOG00000012818) #14	BCAT1 (ENSPLOG00000012638) #15	SOX5 (ENSPLOG00000012174) #16	ETNK1 (ENSPLOG00000012031) #17	C2CD5 (ENSPLOG00000011822) #18	ST8SIA1 (ENSPLOG00000011708) #19	ENSPLOG00000011632	CMAS (ENSPLOG00000011579) #20	ABCC9 (ENSPLOG00000010955) #21	KCNJ8 (ENSPLOG00000010861) #22	ENSPLOG00000010845 ##23	GYS2 (ENSPLOG00000010733) #24	SPX (ENSPLOG00000003971) #25	GOLT1B (ENSPLOG00000003943) #26	RECQL (ENSPLOG00000003912) #27	ENSPLOG00000003901	ENSPLOG00000003892	ENSPLOG00000003885	ENSPLOG00000003878	ENSPLOG00000003870	ENSPLOG00000003862	ENSPLOG00000003856	ENSPLOG00000003842	ENSPLOG00000003832	ENSPLOG00000003824
Tiger	MODERN SPECIES	195									ETNK1 (ENSPTIG00000005035) #17	C2CD5 (ENSPTIG00000005651) #18	ENSPTIG00000010057	ST8SIA1 (ENSPTIG00000005896) #19	ENSPTIG00000006008	CMAS (ENSPTIG00000006449) #20	ABCC9 (ENSPTIG00000006749) #21	KCNJ8 (ENSPTIG00000007885) #22	ENSPTIG00000008118 ##23	GYS2 (ENSPTIG00000008157) #24	SPX (ENSPTIG00000008301) #25	GOLT1B (ENSPTIG00000008388) #26	RECQL (ENSPTIG00000008593) #27	ENSPTIG00000010078
Cat	MODERN SPECIES	238	BHLHE41 (ENSFCAG00000042690)	RASSF8 (ENSFCAG00000028575) #7	LMNTD1 (ENSFCAG00000027228) #8	KRAS (ENSFCAG00000026808) #10	ETFRF1 (ENSFCAG00000036819) #12	DNAI7 (ENSFCAG00000030767) #13	IRAG2 (ENSFCAG00000027350) #14	BCAT1 (ENSFCAG00000008611) #15	SOX5 (ENSFCAG00000002051) #16	ETNK1 (ENSFCAG00000022622) #17	C2CD5 (ENSFCAG00000025410) #18	ST8SIA1 (ENSFCAG00000037857) #19	ENSFCAG00000022267	CMAS (ENSFCAG00000009874) #20	ABCC9 (ENSFCAG00000012523) #21	KCNJ8 (ENSFCAG00000025909) #22	ENSFCAG00000034803 ##23	GYS2 (ENSFCAG00000012636) #24	SPX (ENSFCAG00000012633) #25	GOLT1B (ENSFCAG00000028655) #26	RECQL (ENSFCAG00000030888) #27	ENSFCAG00000050945	ENSFCAG00000052828	ENSFCAG00000050113	ENSFCAG00000050373	ENSFCAG00000039925	ENSFCAG00000047717	ENSFCAG00000047507	ENSFCAG00000050524	ENSFCAG00000053503	ENSFCAG00000047559
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01000000216593	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728
Equus	ANCESTRAL SPECIES	16	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.b.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00960000189679	ENSGT01000000216593	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728
Horse	DUPLICATION
Horse	DUPLICATION
Horse	MODERN SPECIES	348												ENSECAG00000030575 #19	ENSECAG00000039253	ENSECAG00000033675 #20	ENSECAG00000033731 #21	ENSECAG00000032937 #22
Horse	MODERN SPECIES	27	RASSF8 (ENSECAG00000022648) #7	ENSECAG00000044737	ENSECAG00000054536	LMNTD1 (ENSECAG00000021424) #8	KRAS (ENSECAG00000019522) #10	ETFRF1 (ENSECAG00000028314) #12	DNAI7 (ENSECAG00000015808) #13	IRAG2 (ENSECAG00000009290) #14	BCAT1 (ENSECAG00000020973) #15	SOX5 (ENSECAG00000013978) #16	ETNK1 (ENSECAG00000007231) #17	ENSECAG00000056222	C2CD5 (ENSECAG00000020692) #18	ENSECAG00000028949	ENSECAG00000027792	KCNJ8 (ENSECAG00000016950) #22	LDHB (ENSECAG00000011331) ##23	GYS2 (ENSECAG00000014649) #24	GOLT1B (ENSECAG00000014013) #26	PYROXD1 (ENSECAG00000023975) #29	RECQL (ENSECAG00000024762) #27	ENSECAG00000056186	SLCO1A2 (ENSECAG00000017481) #31	ENSECAG00000013008 #35	SLCO1C1 (ENSECAG00000019552) ##31	PDE3A (ENSECAG00000016360)	AEBP2 (ENSECAG00000012977)	PLEKHA5 (ENSECAG00000022236)	PLCZ1 (ENSECAG00000011373)	ENSECAG00000038825	ENSECAG00000050021
Horse	MODERN SPECIES	399												ENSECAG00000039501 #19	ENSECAG00000034759	ENSECAG00000030640 #20	ABCC9 (ENSECAG00000036801) #21	ENSECAG00000029386 #22
Donkey	MODERN SPECIES	28	BHLHE41 (ENSEASG00005032416)	RASSF8 (ENSEASG00005013894) #7	LMNTD1 (ENSEASG00005013897) #8	ENSEASG00005013898 #10	ETFRF1 (ENSEASG00005033483) #12	DNAI7 (ENSEASG00005013908) #13	ENSEASG00005025148 #14	BCAT1 (ENSEASG00005013924) #15	SOX5 (ENSEASG00005013931) #16	ETNK1 (ENSEASG00005013939) #17	C2CD5 (ENSEASG00005013950) #18	ST8SIA1 (ENSEASG00005032892) #19	ENSEASG00005013966	CMAS (ENSEASG00005013969) #20	ABCC9 (ENSEASG00005013981) #21	KCNJ8 (ENSEASG00005031838) #22	ENSEASG00005014007 ##23	GYS2 (ENSEASG00005014013) #24	SPX (ENSEASG00005030033) #25	GOLT1B (ENSEASG00005014022) #26	RECQL (ENSEASG00005014041) #27	PYROXD1 (ENSEASG00005014140) #29	ENSEASG00005033601	IAPP (ENSEASG00005037873) #30	SLCO1A2 (ENSEASG00005014144) #31	ENSEASG00005014146 #35	SLCO1C1 (ENSEASG00005014151) ##31	PDE3A (ENSEASG00005014159)	AEBP2 (ENSEASG00005014175)	PLEKHA5 (ENSEASG00005014242)	CAPZA3 (ENSEASG00005014578)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950	ENSGT00940000159982
Megabat	MODERN SPECIES	244															ABCC9 (ENSPVAG00000002464) #21	KCNJ8 (ENSPVAG00000002463) #22	LDHB (ENSPVAG00000002462) ##23	GYS2 (ENSPVAG00000002461) #24	SPX (ENSPVAG00000002459) #25	GOLT1B (ENSPVAG00000002458) #26	RECQL (ENSPVAG00000002457) #27	PYROXD1 (ENSPVAG00000002453) #29
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950	ENSGT00940000159982
Greater horseshoe bat	MODERN SPECIES	1	BHLHE41 (ENSRFEG00010001889)	RASSF8 (ENSRFEG00010001871) #7	ETFRF1 (ENSRFEG00010001789) #12	DNAI7 (ENSRFEG00010001662) #13	ENSRFEG00010001489 #14	BCAT1 (ENSRFEG00010001433) #15	SOX5 (ENSRFEG00010001299) #16	ENSRFEG00010001226	ENSRFEG00010001212	ETNK1 (ENSRFEG00010001194) #17	C2CD5 (ENSRFEG00010000717) #18	ST8SIA1 (ENSRFEG00010000498) #19	ENSRFEG00010000442	CMAS (ENSRFEG00010000404) #20	ABCC9 (ENSRFEG00010020339) #21	KCNJ8 (ENSRFEG00010020299) #22	ENSRFEG00010020256 ##23	GYS2 (ENSRFEG00010020225) #24	SPX (ENSRFEG00010020162) #25	GOLT1B (ENSRFEG00010020107) #26	RECQL (ENSRFEG00010020058) #27	PYROXD1 (ENSRFEG00010020011) #29	SLCO1A2 (ENSRFEG00010019968) #31	ENSRFEG00010019819 #35	SLCO1C1 (ENSRFEG00010019523) ##31	ENSRFEG00010019498	PDE3A (ENSRFEG00010019378)	AEBP2 (ENSRFEG00010019343)	PLEKHA5 (ENSRFEG00010019135)	CAPZA3 (ENSRFEG00010019079)	PLCZ1 (ENSRFEG00010018936)
Microbat	MODERN SPECIES	1015	DNAI7 (ENSMLUG00000012468) #13	IRAG2 (ENSMLUG00000012457) #14	ENSMLUG00000014372	BCAT1 (ENSMLUG00000012644) #15	ENSMLUG00000013055 #16	ENSMLUG00000008708	ETNK1 (ENSMLUG00000008294) #17	C2CD5 (ENSMLUG00000011534) #18	ST8SIA1 (ENSMLUG00000010849) #19	ENSMLUG00000026447	ENSMLUG00000023916	ENSMLUG00000023021 #20	ENSMLUG00000029786	ENSMLUG00000026352	ABCC9 (ENSMLUG00000005056) #21	KCNJ8 (ENSMLUG00000005051) #22	ENSMLUG00000012155 ##23	GYS2 (ENSMLUG00000005755) #24	SPX (ENSMLUG00000005750) #25	GOLT1B (ENSMLUG00000005747) #26	RECQL (ENSMLUG00000005741) #27	PYROXD1 (ENSMLUG00000006295) #29	SLCO1A2 (ENSMLUG00000010868) #31	ENSMLUG00000017241 #35	SLCO1C1 (ENSMLUG00000017235) ##31	PDE3A (ENSMLUG00000017228)	AEBP2 (ENSMLUG00000006293)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00990000203615.a.a.b #22
Hedgehog	MODERN SPECIES	15503																KCNJ8 (ENSEEUG00000011551) #22
Common shrew	MODERN SPECIES	9414																KCNJ8 (ENSSARG00000010493) #22
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Xenarthra	ANCESTRAL SPECIES	346											ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.g.a ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29
Armadillo	MODERN SPECIES	518										ETNK1 (ENSDNOG00000019833) #17	C2CD5 (ENSDNOG00000012791) #18	ST8SIA1 (ENSDNOG00000013900) #19	ENSDNOG00000035815	CMAS (ENSDNOG00000005107) #20	ABCC9 (ENSDNOG00000016213) #21	KCNJ8 (ENSDNOG00000000450) #22	ENSDNOG00000013620 ##23	GYS2 (ENSDNOG00000013598) #24	GOLT1B (ENSDNOG00000013576) #26	RECQL (ENSDNOG00000013557) #27	PYROXD1 (ENSDNOG00000004330) #29
Afrotheria	ANCESTRAL SPECIES	56	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950	ENSGT00940000159982
Tenrec	MODERN SPECIES	12820																KCNJ8 (ENSETEG00000009805) #22
Afrotheria_a	ANCESTRAL SPECIES	53	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525.h ##23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950	ENSGT00940000159982
Elephant	MODERN SPECIES	196	ENSLAFG00000030711	RASSF8 (ENSLAFG00000026594) #7	LMNTD1 (ENSLAFG00000004100) #8	KRAS (ENSLAFG00000029239) #10	ETFRF1 (ENSLAFG00000008272) #12	DNAI7 (ENSLAFG00000012438) #13	IRAG2 (ENSLAFG00000012434) #14	BCAT1 (ENSLAFG00000017969) #15	SOX5 (ENSLAFG00000014616) #16	ETNK1 (ENSLAFG00000015898) #17	C2CD5 (ENSLAFG00000022820) #18	ST8SIA1 (ENSLAFG00000010423) #19	ENSLAFG00000030225	CMAS (ENSLAFG00000005720) #20	ABCC9 (ENSLAFG00000004848) #21	KCNJ8 (ENSLAFG00000031038) #22	LDHB (ENSLAFG00000000972) ##23	GYS2 (ENSLAFG00000000969) #24	SPX (ENSLAFG00000000967) #25	GOLT1B (ENSLAFG00000000965) #26	RECQL (ENSLAFG00000000963) #27	PYROXD1 (ENSLAFG00000000962) #29	SLCO1A2 (ENSLAFG00000012557) #31	ENSLAFG00000028736 #35	SLCO1C1 (ENSLAFG00000012246) ##31	PDE3A (ENSLAFG00000012240)	ENSLAFG00000031963	AEBP2 (ENSLAFG00000020685)	PLEKHA5 (ENSLAFG00000014304)	CAPZA3 (ENSLAFG00000027445)	PIK3C2G (ENSLAFG00000014264)
Hyrax	MODERN SPECIES	9443																KCNJ8 (ENSPCAG00000001464) #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00390000009210	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.b #35	ENSGT01080000257336.b.e.b.a.b.a.a.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00390000009210	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.b #35	ENSGT01080000257336.b.e.b.a.b.a.a.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00390000009210	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.b #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00940000155871 #10	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00390000009210	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a.b #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00950000183119.b	ENSGT00940000159950
koala	MODERN SPECIES	56							SOX5 (ENSPCIG00000024345) #16	ENSPCIG00000012207	ETNK1 (ENSPCIG00000012197) #17	C2CD5 (ENSPCIG00000012183) #18	ST8SIA1 (ENSPCIG00000033645) #19	CMAS (ENSPCIG00000022419) #20	ENSPCIG00000032875 #21	ENSPCIG00000022423 #21	ENSPCIG00000033240	KCNJ8 (ENSPCIG00000022441) #22	ENSPCIG00000022443 #23	GYS2 (ENSPCIG00000022444) #24	ENSPCIG00000022447 #25	GOLT1B (ENSPCIG00000022450) #26	RECQL (ENSPCIG00000022452) #27	PYROXD1 (ENSPCIG00000022456) #29	IAPP (ENSPCIG00000007795) #30	SLCO1A2 (ENSPCIG00000007799) #31	ENSPCIG00000009735 #35	SLCO1C1 (ENSPCIG00000016395) ##31	PDE3A (ENSPCIG00000016398)	AEBP2 (ENSPCIG00000021259)	PLEKHA5 (ENSPCIG00000013167)	ENSPCIG00000021235	CAPZA3 (ENSPCIG00000021232)
Common wonbat	MODERN SPECIES	1064	SMC1A (ENSVURG00010015442)	ENSVURG00010015454	BHLHE41 (ENSVURG00010015466)	RASSF8 (ENSVURG00010015473) #7	KRAS (ENSVURG00010015490) #10	ETFRF1 (ENSVURG00010015499) #12	DNAI7 (ENSVURG00010015507) #13	BCAT1 (ENSVURG00010015554) #15	SOX5 (ENSVURG00010016055) #16	ENSVURG00010016116	ETNK1 (ENSVURG00010016127) #17	C2CD5 (ENSVURG00010016161) #18	ST8SIA1 (ENSVURG00010016229) #19	CMAS (ENSVURG00010016240) #20	ABCC9 (ENSVURG00010016276) #21	KCNJ8 (ENSVURG00010016410) #22	LDHB (ENSVURG00010016421) #23	GYS2 (ENSVURG00010016441) #24	ENSVURG00010016461 #25	GOLT1B (ENSVURG00010016474) #26	RECQL (ENSVURG00010016484) #27	PYROXD1 (ENSVURG00010016502) #29	ENSVURG00010016537	SLCO1A2 (ENSVURG00010016568) #31	ENSVURG00010016769 #35	SLCO1C1 (ENSVURG00010016901) ##31	PDE3A (ENSVURG00010016911)	AEBP2 (ENSVURG00010016921)	PLEKHA5 (ENSVURG00010016942)	ENSVURG00010017008	CAPZA3 (ENSVURG00010017010)
Wallaby	MODERN SPECIES	13270																KCNJ8 (ENSMEUG00000011703) #22
Tasmanian devil	MODERN SPECIES	4	SSPN (ENSSHAG00000028577)	BHLHE41 (ENSSHAG00000028369)	RASSF8 (ENSSHAG00000012373) #7	ENSSHAG00000009195 #8	KRAS (ENSSHAG00000006631) #10	DNAI7 (ENSSHAG00000005318) #13	IRAG2 (ENSSHAG00000004469) #14	BCAT1 (ENSSHAG00000002407) #15	SOX5 (ENSSHAG00000032245) #16	ENSSHAG00000028766	ETNK1 (ENSSHAG00000024329) #17	C2CD5 (ENSSHAG00000026240) #18	ST8SIA1 (ENSSHAG00000025650) #19	CMAS (ENSSHAG00000013887) #20	ABCC9 (ENSSHAG00000014330) #21	KCNJ8 (ENSSHAG00000015085) #22	LDHB (ENSSHAG00000015400) #23	GYS2 (ENSSHAG00000015521) #24	ENSSHAG00000024034 #25	GOLT1B (ENSSHAG00000021470) #26	ENSSHAG00000015815 #27	PYROXD1 (ENSSHAG00000015889) #29	ENSSHAG00000021856	ENSSHAG00000016183 #31	ENSSHAG00000016378 #35	ENSSHAG00000016628 #35	ENSSHAG00000016858 ##31	ENSSHAG00000028604	PDE3A (ENSSHAG00000017145)	ENSSHAG00000017500	ENSSHAG00000017579
Opossum	MODERN SPECIES	7	ENSMODG00000017456 #8	KRAS (ENSMODG00000017458) #10	ETFRF1 (ENSMODG00000017460) #12	DNAI7 (ENSMODG00000017466) #13	IRAG2 (ENSMODG00000017472) #14	BCAT1 (ENSMODG00000017691) #15	SOX5 (ENSMODG00000017704) #16	ENSMODG00000036706	ENSMODG00000024904	ETNK1 (ENSMODG00000017711) #17	C2CD5 (ENSMODG00000017718) #18	ST8SIA1 (ENSMODG00000017726) #19	ENSMODG00000049680	CMAS (ENSMODG00000017742) #20	ABCC9 (ENSMODG00000017771) #21	KCNJ8 (ENSMODG00000049086) #22	ENSMODG00000045049	LDHB (ENSMODG00000017786) #23	GYS2 (ENSMODG00000017796) #24	SPX (ENSMODG00000039580) #25	GOLT1B (ENSMODG00000040274) #26	ENSMODG00000017805 #27	PYROXD1 (ENSMODG00000017811) #29	ENSMODG00000047730 #30	SLCO1A2 (ENSMODG00000017821) #31	ENSMODG00000036527 #35	ENSMODG00000017829 #35	ENSMODG00000050540 #35	SLCO1C1 (ENSMODG00000043571) ##31	PDE3A (ENSMODG00000017859)	ENSMODG00000029684
Platypus	MODERN SPECIES	11	SSPN (ENSOANG00000045085)	ENSOANG00000040055	RASSF8 (ENSOANG00000046756) #7	ENSOANG00000043766 #8	KRAS (ENSOANG00000037990) #10	ETFRF1 (ENSOANG00000012351) #12	ENSOANG00000045289 #13	ENSOANG00000038600 #14	BCAT1 (ENSOANG00000013411) #15	SOX5 (ENSOANG00000042173) #16	ETNK1 (ENSOANG00000041921) #17	C2CD5 (ENSOANG00000031241) #18	ST8SIA1 (ENSOANG00000047410) #19	CMAS (ENSOANG00000011047) #20	ABCC9 (ENSOANG00000045837) #21	KCNJ8 (ENSOANG00000010537) #22	LDHB (ENSOANG00000010493) #23	ENSOANG00000030957	GYS2 (ENSOANG00000049261) #24	GOLT1B (ENSOANG00000049456) #26	RECQL (ENSOANG00000002400) #27	ENSOANG00000046266	ENSOANG00000036961	ENSOANG00000029748	MGP (ENSOANG00000040820)	ENSOANG00000020846	ENSOANG00000046600	ENSOANG00000039657	ENSOANG00000049602	ENSOANG00000045245	EPS8 (ENSOANG00000045443)
Sauria	ANCESTRAL SPECIES	4	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT00910000148264	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00940000167397.b	ENSGT00390000002793
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E	ENSGT00940000159247	ENSGT00710000106806	ENSGT00390000006837	ENSGT00390000005903
Episquamata	ANCESTRAL SPECIES	3	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00940000160828.a	ENSGT00940000160828.b	ENSGT00390000008767.d	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00950000185347	ENSGT00940000166365	ENSGT00530000064424
Toxicofera	ANCESTRAL SPECIES	7	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00950000185347	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E	ENSGT00940000159247	ENSGT00710000106806
Elapidae	ANCESTRAL SPECIES	6	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b.q.a #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00950000185347	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E	ENSGT00940000159247	ENSGT00710000106806
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b.q.a #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00950000185347	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E	ENSGT00940000159247	ENSGT00710000106806
Acanthophiinae	ANCESTRAL SPECIES		ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00390000006233.c.b.x	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b.r #21	ENSGT00940000156680.b.b.q.a #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00950000185347	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E	ENSGT00940000159247	ENSGT00710000106806
Eastern brown snake	MODERN SPECIES		SLCO1A2 (ENSPTXG00000002540) #31	IAPP (ENSPTXG00000002539) #30	PYROXD1 (ENSPTXG00000002536) #29	RECQL (ENSPTXG00000001978) #27	GOLT1B (ENSPTXG00000001972) #26	BCAT1 (ENSPTXG00000001970) #15	SOX5 (ENSPTXG00000001706) #16	ETNK1 (ENSPTXG00000001704) #17	C2CD5 (ENSPTXG00000001695) #18	ST8SIA1 (ENSPTXG00000001689) #19	ENSPTXG00000001676	ENSPTXG00000001635	CMAS (ENSPTXG00000001620) #20	ENSPTXG00000000282 #21	ENSPTXG00000000138 #21	KCNJ8 (ENSPTXG00000000128) #22	LDHB (ENSPTXG00000000083) #23	GYS2 (ENSPTXG00000000026) #24	IRAG2 (ENSPTXG00000000010) #14	DNAI7 (ENSPTXG00000000009) #13	ETFRF1 (ENSPTXG00000000008) #12	KRAS (ENSPTXG00000000007) #10	PROSER2 (ENSPTXG00000000006)	ECHDC3 (ENSPTXG00000000005)	USP6NL (ENSPTXG00000000004)	CELF2 (ENSPTXG00000000003)	GATA3 (ENSPTXG00000000002)
Mainland tiger snake	MODERN SPECIES	98	ENSNSUG00000002005 #35	SLCO1A2 (ENSNSUG00000002010) #31	IAPP (ENSNSUG00000002015) #30	PYROXD1 (ENSNSUG00000002017) #29	RECQL (ENSNSUG00000002023) #27	GOLT1B (ENSNSUG00000002178) #26	BCAT1 (ENSNSUG00000002183) #15	SOX5 (ENSNSUG00000002195) #16	ETNK1 (ENSNSUG00000002341) #17	C2CD5 (ENSNSUG00000002348) #18	ST8SIA1 (ENSNSUG00000003190) #19	ENSNSUG00000003191	ENSNSUG00000003195	ENSNSUG00000003212	ENSNSUG00000003213 #21	KCNJ8 (ENSNSUG00000003215) #22	LDHB (ENSNSUG00000003217) #23	ENSNSUG00000003221	GYS2 (ENSNSUG00000003222) #24	DNAI7 (ENSNSUG00000003224) #13	ETFRF1 (ENSNSUG00000003238) #12	KRAS (ENSNSUG00000003239) #10	PROSER2 (ENSNSUG00000003240)	ECHDC3 (ENSNSUG00000003242)	ENSNSUG00000003243	ENSNSUG00000003245	CELF2 (ENSNSUG00000003254)
Blue-lipped sea krait	MODERN SPECIES	10148																KCNJ8 (ENSLLTG00000014646) #22
Indian cobra	MODERN SPECIES	6	IAPP (ENSNNAG00000005070) #30	PYROXD1 (ENSNNAG00000005088) #29	RECQL (ENSNNAG00000005143) #27	GOLT1B (ENSNNAG00000005189) #26	BCAT1 (ENSNNAG00000005200) #15	SOX5 (ENSNNAG00000005245) #16	ENSNNAG00000005454	ETNK1 (ENSNNAG00000005465) #17	ENSNNAG00000005512	ENSNNAG00000005524	ST8SIA1 (ENSNNAG00000005538) #19	ENSNNAG00000005572	ENSNNAG00000005635	ENSNNAG00000005651 #21	ENSNNAG00000005664 #21	KCNJ8 (ENSNNAG00000005747) #22	LDHB (ENSNNAG00000005766) #23	ENSNNAG00000005791	GYS2 (ENSNNAG00000005810) #24	ENSNNAG00000005881 #14	DNAI7 (ENSNNAG00000005967) #13	ETFRF1 (ENSNNAG00000006027) #12	ENSNNAG00000006042 #10	ENSNNAG00000006053 #10	PROSER2 (ENSNNAG00000006066)	ECHDC3 (ENSNNAG00000006078)	ENSNNAG00000006098	ENSNNAG00000006139	CELF2 (ENSNNAG00000006183)	GATA3 (ENSNNAG00000006620)	TAF3 (ENSNNAG00000006639)
Lizard	MODERN SPECIES	4	IAPP (ENSACAG00000017440) #30	PYROXD1 (ENSACAG00000015356) #29	GOLT1B (ENSACAG00000017380) #26	BCAT1 (ENSACAG00000017352) #15	ENSACAG00000036186	SOX5 (ENSACAG00000017320) #16	ENSACAG00000040751	ETNK1 (ENSACAG00000017304) #17	C2CD5 (ENSACAG00000017277) #18	ST8SIA1 (ENSACAG00000017264) #19	ENSACAG00000017259	CMAS (ENSACAG00000017240) #20	ENSACAG00000039898 #21	ENSACAG00000040728	ENSACAG00000017139 #21	KCNJ8 (ENSACAG00000017132) #22	ENSACAG00000038918 #23	ENSACAG00000017089 #23	ENSACAG00000017086	GYS2 (ENSACAG00000017029) #24	SPX (ENSACAG00000040090) #25	ENSACAG00000016972 #13	PROSER2 (ENSACAG00000038065)	ECHDC3 (ENSACAG00000037804)	ENSACAG00000042478	USP6NL (ENSACAG00000007776)	CELF2 (ENSACAG00000007661)	ENSACAG00000042152	ENSACAG00000044487	ENSACAG00000035065	ENSACAG00000037524
Laterata	ANCESTRAL SPECIES	6	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000204711	ENSGT00410000026259	ENSGT00970000198077	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000023612 #31	IAPP (ENSPMRG00000023627) #30	PYROXD1 (ENSPMRG00000023628) #29	RECQL (ENSPMRG00000023632) #27	GOLT1B (ENSPMRG00000023640) #26	BCAT1 (ENSPMRG00000023648) #15	SOX5 (ENSPMRG00000023658) #16	ENSPMRG00000023665	ETNK1 (ENSPMRG00000023668) #17	C2CD5 (ENSPMRG00000023696) #18	ENSPMRG00000023736	ST8SIA1 (ENSPMRG00000023738) #19	ENSPMRG00000023742	CMAS (ENSPMRG00000023745) #20	ABCC9 (ENSPMRG00000023784) #21	KCNJ8 (ENSPMRG00000023828) #22	LDHB (ENSPMRG00000023829) #23	ENSPMRG00000023831	GYS2 (ENSPMRG00000023832) #24	SPX (ENSPMRG00000023835) #25	IRAG2 (ENSPMRG00000023839) #14	ENSPMRG00000023842 #10	ENSPMRG00000023848	ETFRF1 (ENSPMRG00000023849) #12	ENSPMRG00000023850	ENSPMRG00000023851	ECHDC3 (ENSPMRG00000023852)	USP6NL (ENSPMRG00000023855)	ENSPMRG00000023856	CELF2 (ENSPMRG00000012885)	ENSPMRG00000012912
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000006363 #35	SLCO1A2 (ENSSMRG00000006624) #31	IAPP (ENSSMRG00000006632) #30	PYROXD1 (ENSSMRG00000006638) #29	RECQL (ENSSMRG00000006658) #27	GOLT1B (ENSSMRG00000006667) #26	BCAT1 (ENSSMRG00000006678) #15	ENSSMRG00000006690	SOX5 (ENSSMRG00000006744) #16	ETNK1 (ENSSMRG00000006775) #17	C2CD5 (ENSSMRG00000006791) #18	ST8SIA1 (ENSSMRG00000006824) #19	ENSSMRG00000006832	CMAS (ENSSMRG00000006846) #20	ABCC9 (ENSSMRG00000006859) #21	KCNJ8 (ENSSMRG00000006916) #22	LDHB (ENSSMRG00000006917) #23	GYS2 (ENSSMRG00000006963) #24	SPX (ENSSMRG00000006975) #25	IRAG2 (ENSSMRG00000006977) #14	DNAI7 (ENSSMRG00000006979) #13	ETFRF1 (ENSSMRG00000006986) #12	KRAS (ENSSMRG00000006993) #10	PROSER2 (ENSSMRG00000007011)	ECHDC3 (ENSSMRG00000007015)	USP6NL (ENSSMRG00000007038)	CELF2 (ENSSMRG00000007088)	ENSSMRG00000007119	GATA3 (ENSSMRG00000007132)	TAF3 (ENSSMRG00000007170)	ATP5F1C (ENSSMRG00000007172)
tuatara	MODERN SPECIES	1190	PDE3A (ENSSPUG00000018552)	SLCO1C1 (ENSSPUG00000018559) ##31	ENSSPUG00000018565 #35	SLCO1A2 (ENSSPUG00000018574) #31	IAPP (ENSSPUG00000018597) #30	PYROXD1 (ENSSPUG00000018604) #29	RECQL (ENSSPUG00000018613) #27	BCAT1 (ENSSPUG00000018626) #15	SOX5 (ENSSPUG00000018638) #16	ETNK1 (ENSSPUG00000018649) #17	C2CD5 (ENSSPUG00000018657) #18	ST8SIA1 (ENSSPUG00000018662) #19	ENSSPUG00000018667	CMAS (ENSSPUG00000018674) #20	ABCC9 (ENSSPUG00000018683) #21	KCNJ8 (ENSSPUG00000018690) #22	LDHB (ENSSPUG00000018692) #23	ENSSPUG00000018696	GYS2 (ENSSPUG00000018699) #24	SPX (ENSSPUG00000018708) #25	IRAG2 (ENSSPUG00000018711) #14	DNAI7 (ENSSPUG00000018744) #13	ETFRF1 (ENSSPUG00000018785) #12	KRAS (ENSSPUG00000018789) #10	ENSSPUG00000018793	ECHDC3 (ENSSPUG00000018805)	ENSSPUG00000018821	ENSSPUG00000018822	ENSSPUG00000018825	ENSSPUG00000018828	CELF2 (ENSSPUG00000018833)
Archelosauria	ANCESTRAL SPECIES	3	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b
Archosauria	ANCESTRAL SPECIES	4	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Aves	ANCESTRAL SPECIES	1	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Neognathae	ANCESTRAL SPECIES	3	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Galloanserae	ANCESTRAL SPECIES	3	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000206817	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Anatidae	ANCESTRAL SPECIES	8	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00990000206817	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Pink-footed goose	MODERN SPECIES	344												ST8SIA1 (ENSABRG00000019415) #19	ENSABRG00000019411	CMAS (ENSABRG00000019409) #20	ABCC9 (ENSABRG00000019405) #21	KCNJ8 (ENSABRG00000019404) #22	LDHB (ENSABRG00000019401) #23
Duck	MODERN SPECIES		ENSAPLG00000004396 #35	SLCO1A2 (ENSAPLG00000003909) #31	IAPP (ENSAPLG00000003888) #30	PYROXD1 (ENSAPLG00000003575) #29	RECQL (ENSAPLG00000003404) #27	GOLT1B (ENSAPLG00000003388) #26	BCAT1 (ENSAPLG00000003259) #15	SOX5 (ENSAPLG00000003238) #16	ETNK1 (ENSAPLG00000003084) #17	C2CD5 (ENSAPLG00000002815) #18	ST8SIA1 (ENSAPLG00000023759) #19	ENSAPLG00000002767	ENSAPLG00000023735	CMAS (ENSAPLG00000016908) #20	ABCC9 (ENSAPLG00000016445) #21	KCNJ8 (ENSAPLG00000016438) #22	LDHB (ENSAPLG00000016403) #23	ENSAPLG00000026669	GYS2 (ENSAPLG00000016252) #24	SPX (ENSAPLG00000016220) #25	IRAG2 (ENSAPLG00000016181) #14	DNAI7 (ENSAPLG00000015977) #13	ETFRF1 (ENSAPLG00000015974) #12	KRAS (ENSAPLG00000015953) #10	ENSAPLG00000028893	RASSF8 (ENSAPLG00000024358) #7	BHLHE41 (ENSAPLG00000023232)	SSPN (ENSAPLG00000022486)	ITPR2 (ENSAPLG00000014956)	INTS13 (ENSAPLG00000007349)	FGFR1OP2 (ENSAPLG00000007905)
Phasianidae	ANCESTRAL SPECIES		ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT01100000263564.b	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00390000014557
Phasianidae_b	ANCESTRAL SPECIES		ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT01100000263564.b	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00390000014557
Chicken	MODERN SPECIES		SLCO1A2 (ENSGALG00010011668) #31	IAPP (ENSGALG00010011680) #30	PYROXD1 (ENSGALG00010013802) #29	RECQL (ENSGALG00010013867) #27	GOLT1B (ENSGALG00010014045) #26	BCAT1 (ENSGALG00010015306) #15	SOX5 (ENSGALG00010014120) #16	ENSGALG00010014391	ETNK1 (ENSGALG00010014515) #17	C2CD5 (ENSGALG00010014626) #18	ST8SIA1 (ENSGALG00010014713) #19	C3AR1L (ENSGALG00010014821)	ENSGALG00010014870	CMAS (ENSGALG00010011573) #20	ABCC9 (ENSGALG00010013156) #21	KCNJ8 (ENSGALG00010013173) #22	LDHB (ENSGALG00010013184) #23	GYS2 (ENSGALG00010013201) #24	SPX (ENSGALG00010013963) #25	IRAG2 (ENSGALG00010014019) #14	DNAI7 (ENSGALG00010014154) #13	ETFRF1 (ENSGALG00010014213) #12	KRAS (ENSGALG00010014246) #10	RASSF8 (ENSGALG00010014328) #7	BHLHE41 (ENSGALG00010014338)	SSPN (ENSGALG00010014361)	ITPR2 (ENSGALG00010014477)	ENSGALG00010014697	INTS13 (ENSGALG00010014728)	FGFR1OP2 (ENSGALG00010014748)	TM7SF3 (ENSGALG00010014839)
Turkey	MODERN SPECIES		BCL2L14 (ENSMGAG00000013852)	ETV6 (ENSMGAG00000013849)	ENSMGAG00000013843	ENSMGAG00000013840	PKDREJ (ENSMGAG00000021590)	CDPF1 (ENSMGAG00000017520)	PPARA (ENSMGAG00000013838)	WNT7B (ENSMGAG00000013837)	ETNK1 (ENSMGAG00000013647) #17	C2CD5 (ENSMGAG00000013649) #18	ST8SIA1 (ENSMGAG00000013671) #19	ENSMGAG00000013670	ENSMGAG00000013669	CMAS (ENSMGAG00000013666) #20	ABCC9 (ENSMGAG00000013655) #21	KCNJ8 (ENSMGAG00000013654) #22	LDHB (ENSMGAG00000013702) #23	GYS2 (ENSMGAG00000013698) #24	ENSMGAG00000018603	SPX (ENSMGAG00000013697) #25	IRAG2 (ENSMGAG00000013692) #14	DNAI7 (ENSMGAG00000013688) #13	ETFRF1 (ENSMGAG00000022020) #12	KRAS (ENSMGAG00000013673) #10	ENSMGAG00000020387	ENSMGAG00000013685 #7	SSPN (ENSMGAG00000013734)	ITPR2 (ENSMGAG00000013722)	INTS13 (ENSMGAG00000013714)	FGFR1OP2 (ENSMGAG00000013712)	TM7SF3 (ENSMGAG00000013710)
Japanese quail	MODERN SPECIES		SLCO1A2 (ENSCJPG00005003106) #31	IAPP (ENSCJPG00005003113) #30	PYROXD1 (ENSCJPG00005003115) #29	RECQL (ENSCJPG00005003124) #27	GOLT1B (ENSCJPG00005003126) #26	BCAT1 (ENSCJPG00005003144) #15	SOX5 (ENSCJPG00005003158) #16	ETNK1 (ENSCJPG00005003187) #17	C2CD5 (ENSCJPG00005003196) #18	ST8SIA1 (ENSCJPG00005003209) #19	ENSCJPG00005003211	C3AR1 (ENSCJPG00005003216)	ENSCJPG00005003219	CMAS (ENSCJPG00005003221) #20	ABCC9 (ENSCJPG00005003226) #21	KCNJ8 (ENSCJPG00005003236) #22	LDHB (ENSCJPG00005003238) #23	GYS2 (ENSCJPG00005003244) #24	SPX (ENSCJPG00005003246) #25	ENSCJPG00005003254 #14	DNAI7 (ENSCJPG00005003259) #13	ETFRF1 (ENSCJPG00005003264) #12	KRAS (ENSCJPG00005003266) #10	RASSF8 (ENSCJPG00005003275) #7	BHLHE41 (ENSCJPG00005003277)	SSPN (ENSCJPG00005003282)	ITPR2 (ENSCJPG00005003455)	ENSCJPG00005014196	INTS13 (ENSCJPG00005014197)	FGFR1OP2 (ENSCJPG00005014198)	TM7SF3 (ENSCJPG00005014199)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000153185.a.a.a	ENSGT00390000006760	ENSGT00390000012980.a	ENSGT00390000013715	ENSGT01030000235072	ENSGT00940000156720	ENSGT00950000182973.a.c.b	ENSGT00940000159340	ENSGT00390000009978	ENSGT00940000157871	ENSGT00940000156876	ENSGT00730000111328	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00510000047981.c	ENSGT00530000063825.A.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000153185.a.a.a	ENSGT00390000006760	ENSGT00390000012980.a	ENSGT00390000013715	ENSGT01030000235072	ENSGT00940000156720	ENSGT00950000182973.a.c.b	ENSGT00940000159340	ENSGT00390000009978	ENSGT00940000157871	ENSGT00940000156876	ENSGT00730000111328	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00510000047981.c	ENSGT00530000063825.A.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000153185.a.a.a	ENSGT00390000006760	ENSGT00390000012980.a	ENSGT00390000013715	ENSGT01030000235072	ENSGT00940000156720	ENSGT00950000182973.a.c.b	ENSGT00940000159340	ENSGT00390000009978	ENSGT00940000157871	ENSGT00940000156876	ENSGT00730000111328	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00510000047981.c	ENSGT00530000063825.A.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000153185.a.a.a	ENSGT00390000006760	ENSGT00390000012980.a	ENSGT00390000013715	ENSGT01030000235072	ENSGT00940000156720	ENSGT00950000182973.a.c.b	ENSGT00940000159340	ENSGT00390000009978	ENSGT00940000157871	ENSGT00940000156876	ENSGT00730000111328	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00510000047981.c	ENSGT00530000063825.A.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793
Common canary	MODERN SPECIES	26	SCUBE1 (ENSSCAG00000008411)	TTLL12 (ENSSCAG00000008561)	TSPO (ENSSCAG00000008659)	MCAT (ENSSCAG00000008662)	ENSSCAG00000008665	TTLL1 (ENSSCAG00000008671)	PACSIN2 (ENSSCAG00000008688)	YBX3 (ENSSCAG00000008708)	SYCE3 (ENSSCAG00000008716)	STYK1 (ENSSCAG00000008718)	GABARAPL1 (ENSSCAG00000008719)	TMEM52B (ENSSCAG00000008721)	ENSSCAG00000008728	CMAS (ENSSCAG00000008739) #20	ABCC9 (ENSSCAG00000008765) #21	KCNJ8 (ENSSCAG00000008826) #22	LDHB (ENSSCAG00000008831) #23	GYS2 (ENSSCAG00000008867) #24	SPX (ENSSCAG00000009153) #25	IRAG2 (ENSSCAG00000009163) #14	A4GALT (ENSSCAG00000009175)	ENSSCAG00000009188	CYB5R3 (ENSSCAG00000009199)	REP15 (ENSSCAG00000009208)	PPFIBP1 (ENSSCAG00000009235)	BMAL2 (ENSSCAG00000009281)	STK38L (ENSSCAG00000009318)	MED21 (ENSSCAG00000009334)	TM7SF3 (ENSSCAG00000009337)	FGFR1OP2 (ENSSCAG00000009342)	INTS13 (ENSSCAG00000009349)
Zebra finch	MODERN SPECIES	11	TTLL12 (ENSTGUG00000012025)	TSPO (ENSTGUG00000012033)	MCAT (ENSTGUG00000021072)	ENSTGUG00000022797	TTLL1 (ENSTGUG00000012037)	PACSIN2 (ENSTGUG00000012038)	SYCE3 (ENSTGUG00000020816)	YBX3 (ENSTGUG00000012047)	STYK1 (ENSTGUG00000012052)	ENSTGUG00000020496	GABARAPL1 (ENSTGUG00000029032)	TMEM52B (ENSTGUG00000025131)	ENSTGUG00000012060	CMAS (ENSTGUG00000012063) #20	ABCC9 (ENSTGUG00000012068) #21	KCNJ8 (ENSTGUG00000027226) #22	LDHB (ENSTGUG00000025396) #23	GYS2 (ENSTGUG00000012106) #24	SPX (ENSTGUG00000012121) #25	IRAG2 (ENSTGUG00000012124) #14	ENSTGUG00000026261	ENSTGUG00000020648	ENSTGUG00000012140	CYB5R3 (ENSTGUG00000012143)	PPFIBP1 (ENSTGUG00000012151)	ENSTGUG00000021374	REP15 (ENSTGUG00000012162)	BMAL2 (ENSTGUG00000012163)	STK38L (ENSTGUG00000012169)	MED21 (ENSTGUG00000024373)	TM7SF3 (ENSTGUG00000012183)
Medium ground finch	MODERN SPECIES	272									YBX3 (ENSGFOG00000007275)	SYCE3 (ENSGFOG00000007268)	STYK1 (ENSGFOG00000007261)	GABARAPL1 (ENSGFOG00000007258)	ENSGFOG00000007251	CMAS (ENSGFOG00000007245) #20	ABCC9 (ENSGFOG00000007221) #21	KCNJ8 (ENSGFOG00000007215) #22	LDHB (ENSGFOG00000007206) #23	GYS2 (ENSGFOG00000007167) #24	SPX (ENSGFOG00000007153) #25	A4GALT (ENSGFOG00000007145)	ENSGFOG00000007136	CYB5R3 (ENSGFOG00000007127)	PPFIBP1 (ENSGFOG00000006783)
Flycatcher	MODERN SPECIES	10	MPPED1 (ENSFALG00000026432)	SCUBE1 (ENSFALG00000006655)	TTLL12 (ENSFALG00000006664)	TSPO (ENSFALG00000023447)	ENSFALG00000027054	TTLL1 (ENSFALG00000006685)	PACSIN2 (ENSFALG00000006688)	ENSFALG00000029019	ENSFALG00000025259	ENSFALG00000003654	ENSFALG00000003648	ENSFALG00000003642	ENSFALG00000003622	CMAS (ENSFALG00000003601) #20	ABCC9 (ENSFALG00000003583) #21	KCNJ8 (ENSFALG00000027140) #22	LDHB (ENSFALG00000024585) #23	GYS2 (ENSFALG00000003557) #24	SPX (ENSFALG00000003552) #25	ENSFALG00000025294 #14	ENSFALG00000015090	ENSFALG00000003966	ENSFALG00000025784	ENSFALG00000003959	ENSFALG00000023994	ENSFALG00000003955	ENSFALG00000015072	BMAL2 (ENSFALG00000003942)	STK38L (ENSFALG00000003933)	MED21 (ENSFALG00000003930)	TM7SF3 (ENSFALG00000003926)
Great tit	MODERN SPECIES	10	UCN3 (ENSPMJG00000013089)	ENSPMJG00000013090	NET1 (ENSPMJG00000013092)	CALML3 (ENSPMJG00000013093)	ENSPMJG00000013094	ENSPMJG00000013096	GDI2 (ENSPMJG00000013097)	ANKRD16 (ENSPMJG00000013098)	FBH1 (ENSPMJG00000013099)	ENSPMJG00000013100	ENSPMJG00000013102	TMEM52B (ENSPMJG00000013103)	ENSPMJG00000013104	CMAS (ENSPMJG00000013105) #20	ABCC9 (ENSPMJG00000013107) #21	KCNJ8 (ENSPMJG00000013108) #22	LDHB (ENSPMJG00000013110) #23	GYS2 (ENSPMJG00000013111) #24	SPX (ENSPMJG00000013112) #25	ENSPMJG00000013114 #14	ENSPMJG00000013116	LRGUK (ENSPMJG00000000056)	EXOC4 (ENSPMJG00000000141)	CHCHD3 (ENSPMJG00000000288)	ENSPMJG00000000320	PLXNA4 (ENSPMJG00000000353)	ENSPMJG00000000439	MKLN1 (ENSPMJG00000000489)	ENSPMJG00000000578	ENSPMJG00000000585	ENSPMJG00000000590
Neognathae_c	ANCESTRAL SPECIES		ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Kakapo	MODERN SPECIES	20	ENSSHBG00005002118 #35	ENSSHBG00005002066 #35	SLCO1A2 (ENSSHBG00005002004) #31	IAPP (ENSSHBG00005001970) #30	PYROXD1 (ENSSHBG00005001947) #29	RECQL (ENSSHBG00005001928) #27	GOLT1B (ENSSHBG00005001895) #26	BCAT1 (ENSSHBG00005001829) #15	SOX5 (ENSSHBG00005001677) #16	ETNK1 (ENSSHBG00005001630) #17	C2CD5 (ENSSHBG00005001558) #18	ST8SIA1 (ENSSHBG00005001485) #19	ENSSHBG00005001424	CMAS (ENSSHBG00005000671) #20	ABCC9 (ENSSHBG00005015154) #21	KCNJ8 (ENSSHBG00005014701) #22	LDHB (ENSSHBG00005014687) #23	GYS2 (ENSSHBG00005014671) #24	SPX (ENSSHBG00005014662) #25	IRAG2 (ENSSHBG00005014648) #14	DNAI7 (ENSSHBG00005014618) #13	ETFRF1 (ENSSHBG00005014601) #12	KRAS (ENSSHBG00005014594) #10	ENSSHBG00005014584 #8	RASSF8 (ENSSHBG00005014578) #7	BHLHE41 (ENSSHBG00005014564)	SSPN (ENSSHBG00005014543)	ITPR2 (ENSSHBG00005013963)	INTS13 (ENSSHBG00005013819)	FGFR1OP2 (ENSSHBG00005013801)	TM7SF3 (ENSSHBG00005013789)
Golden eagle	MODERN SPECIES	8	SLCO1A2 (ENSACCG00020006654) #31	IAPP (ENSACCG00020006668) #30	PYROXD1 (ENSACCG00020006684) #29	RECQL (ENSACCG00020006712) #27	GOLT1B (ENSACCG00020006755) #26	BCAT1 (ENSACCG00020006774) #15	ENSACCG00020006787	SOX5 (ENSACCG00020006911) #16	ETNK1 (ENSACCG00020006980) #17	C2CD5 (ENSACCG00020007378) #18	ST8SIA1 (ENSACCG00020007686) #19	ENSACCG00020007699	CMAS (ENSACCG00020007715) #20	ENSACCG00020007731 #21	ENSACCG00020007791 #21	KCNJ8 (ENSACCG00020007883) #22	LDHB (ENSACCG00020007895) #23	GYS2 (ENSACCG00020007913) #24	SPX (ENSACCG00020007933) #25	IRAG2 (ENSACCG00020007953) #14	DNAI7 (ENSACCG00020007983) #13	ETFRF1 (ENSACCG00020008012) #12	KRAS (ENSACCG00020008023) #10	RASSF8 (ENSACCG00020008036) #7	BHLHE41 (ENSACCG00020008046)	SSPN (ENSACCG00020008052)	ITPR2 (ENSACCG00020014160)	INTS13 (ENSACCG00020016853)	FGFR1OP2 (ENSACCG00020016860)	PRMT8 (ENSACCG00020016863)	CRACR2A (ENSACCG00020016865)
African ostrich	MODERN SPECIES	260								BCAT1 (ENSSCUG00000005048) #15	SOX5 (ENSSCUG00000005050) #16	ETNK1 (ENSSCUG00000005056) #17	C2CD5 (ENSSCUG00000005072) #18	ST8SIA1 (ENSSCUG00000005118) #19	ENSSCUG00000005121	CMAS (ENSSCUG00000005124) #20	ABCC9 (ENSSCUG00000005127) #21	KCNJ8 (ENSSCUG00000005138) #22	LDHB (ENSSCUG00000005139) #23	GYS2 (ENSSCUG00000005140) #24	SPX (ENSSCUG00000005142) #25	IRAG2 (ENSSCUG00000005144) #14	DNAI7 (ENSSCUG00000005147) #13	KRAS (ENSSCUG00000005149) #10	ETFRF1 (ENSSCUG00000005150) #12	ENSSCUG00000005152 #8	RASSF8 (ENSSCUG00000005155) #7	ENSSCUG00000005157	SSPN (ENSSCUG00000005159)	ITPR2 (ENSSCUG00000005165)
Australian saltwater crocodile	MODERN SPECIES	49	ENSCPRG00005012154 #35	ENSCPRG00005012093 #35	SLCO1A2 (ENSCPRG00005012034) #31	IAPP (ENSCPRG00005012001) #30	PYROXD1 (ENSCPRG00005011997) #29	RECQL (ENSCPRG00005011981) #27	GOLT1B (ENSCPRG00005011974) #26	BCAT1 (ENSCPRG00005011965) #15	SOX5 (ENSCPRG00005011849) #16	ETNK1 (ENSCPRG00005011720) #17	C2CD5 (ENSCPRG00005011714) #18	ST8SIA1 (ENSCPRG00005011672) #19	ENSCPRG00005011622	CMAS (ENSCPRG00005011614) #20	ABCC9 (ENSCPRG00005011566) #21	KCNJ8 (ENSCPRG00005011543) #22	ENSCPRG00005011538	LDHB (ENSCPRG00005011537) #23	GYS2 (ENSCPRG00005011527) #24	SPX (ENSCPRG00005011505) #25	IRAG2 (ENSCPRG00005011495) #14	ETFRF1 (ENSCPRG00005011491) #12	DNAI7 (ENSCPRG00005011487) #13	KRAS (ENSCPRG00005011484) #10	ENSCPRG00005011471 #8	RASSF8 (ENSCPRG00005011432) #7	SSPN (ENSCPRG00005011416)	ITPR2 (ENSCPRG00005005714)	INTS13 (ENSCPRG00005004880)	FGFR1OP2 (ENSCPRG00005004865)	TM7SF3 (ENSCPRG00005004854)
Cryptodira	ANCESTRAL SPECIES	10	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00910000144343 #8	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Emydidae	ANCESTRAL SPECIES	5	ENSGT01080000257336.b.e.b.a.b.a.k #35	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
painted turtle	MODERN SPECIES	15	SLCO1A2 (ENSCPBG00000009085) #31	IAPP (ENSCPBG00000009092) #30	PYROXD1 (ENSCPBG00000009098) #29	RECQL (ENSCPBG00000009109) #27	GOLT1B (ENSCPBG00000009123) #26	BCAT1 (ENSCPBG00000009138) #15	ENSCPBG00000009160	SOX5 (ENSCPBG00000009163) #16	ENSCPBG00000009175	ETNK1 (ENSCPBG00000009181) #17	C2CD5 (ENSCPBG00000009193) #18	ST8SIA1 (ENSCPBG00000009230) #19	ENSCPBG00000009233	CMAS (ENSCPBG00000009236) #20	ABCC9 (ENSCPBG00000009242) #21	KCNJ8 (ENSCPBG00000009263) #22	LDHB (ENSCPBG00000009265) #23	ENSCPBG00000009269	GYS2 (ENSCPBG00000009271) #24	SPX (ENSCPBG00000009274) #25	IRAG2 (ENSCPBG00000009279) #14	DNAI7 (ENSCPBG00000009284) #13	ETFRF1 (ENSCPBG00000009287) #12	KRAS (ENSCPBG00000009289) #10	ENSCPBG00000009291	ENSCPBG00000009295 #8	RASSF8 (ENSCPBG00000009305) #7	BHLHE41 (ENSCPBG00000009309)	SSPN (ENSCPBG00000009310)	ITPR2 (ENSCPBG00000009996)	ENSCPBG00000023088
Three-toed box turtle	MODERN SPECIES	49	ENSTMTG00000003759 #35	SLCO1A2 (ENSTMTG00000003820) #31	ENSTMTG00000003947	PYROXD1 (ENSTMTG00000003962) #29	RECQL (ENSTMTG00000003996) #27	GOLT1B (ENSTMTG00000004023) #26	BCAT1 (ENSTMTG00000004038) #15	ENSTMTG00000004061	SOX5 (ENSTMTG00000004075) #16	ETNK1 (ENSTMTG00000004118) #17	C2CD5 (ENSTMTG00000004124) #18	ST8SIA1 (ENSTMTG00000004233) #19	ENSTMTG00000004264	CMAS (ENSTMTG00000009171) #20	ABCC9 (ENSTMTG00000009590) #21	KCNJ8 (ENSTMTG00000014419) #22	LDHB (ENSTMTG00000014427) #23	ENSTMTG00000014437	GYS2 (ENSTMTG00000014457) #24	SPX (ENSTMTG00000014479) #25	IRAG2 (ENSTMTG00000014503) #14	DNAI7 (ENSTMTG00000014548) #13	ETFRF1 (ENSTMTG00000014627) #12	KRAS (ENSTMTG00000014635) #10	RASSF8 (ENSTMTG00000014655) #7	ENSTMTG00000014670	SSPN (ENSTMTG00000014686)	ITPR2 (ENSTMTG00000015648)	INTS13 (ENSTMTG00000022606)	ENSTMTG00000022613	FGFR1OP2 (ENSTMTG00000022615)
Testudinidae	ANCESTRAL SPECIES	14	ENSGT01080000257336.b.e.b.a.b.a.l #35	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT00510000048671 #30	ENSGT00960000189679	ENSGT00390000014894 #29	ENSGT00940000157013 #27	ENSGT00390000014507.a #26	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00530000063722.a #14	ENSGT00390000004708 #13	ENSGT00390000001810 #12	ENSGT00940000155871 #10	ENSGT00950000182839.B.a.a #7	ENSGT00940000161014	ENSGT00390000007747	ENSGT00940000156039	ENSGT00390000002793	ENSGT00390000018003.b	ENSGT00390000008702
Abingdon island giant tortoise	MODERN SPECIES	2036								SOX5 (ENSCABG00000020183) #16	ENSCABG00000020179	ETNK1 (ENSCABG00000020175) #17	C2CD5 (ENSCABG00000019686) #18	ST8SIA1 (ENSCABG00000019678) #19	ENSCABG00000019677	CMAS (ENSCABG00000019653) #20	ABCC9 (ENSCABG00000019634) #21	KCNJ8 (ENSCABG00000019625) #22	LDHB (ENSCABG00000019623) #23
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005006294 #35	ENSGEVG00005005993 #35	SLCO1A2 (ENSGEVG00005005774) #31	ENSGEVG00005005724	PYROXD1 (ENSGEVG00005005696) #29	RECQL (ENSGEVG00005005660) #27	GOLT1B (ENSGEVG00005005636) #26	BCAT1 (ENSGEVG00005005555) #15	SOX5 (ENSGEVG00005005384) #16	ETNK1 (ENSGEVG00005005331) #17	C2CD5 (ENSGEVG00005003996) #18	ST8SIA1 (ENSGEVG00005003765) #19	ENSGEVG00005003723	CMAS (ENSGEVG00005003696) #20	ABCC9 (ENSGEVG00005003614) #21	KCNJ8 (ENSGEVG00005003588) #22	LDHB (ENSGEVG00005003582) #23	ENSGEVG00005003576	GYS2 (ENSGEVG00005003564) #24	SPX (ENSGEVG00005003557) #25	IRAG2 (ENSGEVG00005003531) #14	DNAI7 (ENSGEVG00005003509) #13	ETFRF1 (ENSGEVG00005003501) #12	KRAS (ENSGEVG00005003488) #10	RASSF8 (ENSGEVG00005003481) #7	BHLHE41 (ENSGEVG00005003472)	SSPN (ENSGEVG00005003444)	ITPR2 (ENSGEVG00005002806)	INTS13 (ENSGEVG00005002456)	FGFR1OP2 (ENSGEVG00005002446)	TM7SF3 (ENSGEVG00005002419)
Chinese turtle	MODERN SPECIES	947	ENSPSIG00000003223 #35	ENSPSIG00000003174 #35	SLCO1A2 (ENSPSIG00000003149) #31	IAPP (ENSPSIG00000003145) #30	PYROXD1 (ENSPSIG00000003028) #29	RECQL (ENSPSIG00000002979) #27	GOLT1B (ENSPSIG00000002967) #26	BCAT1 (ENSPSIG00000002845) #15	SOX5 (ENSPSIG00000002789) #16	ETNK1 (ENSPSIG00000002786) #17	C2CD5 (ENSPSIG00000002682) #18	ST8SIA1 (ENSPSIG00000002676) #19	ENSPSIG00000002667	CMAS (ENSPSIG00000002654) #20	ABCC9 (ENSPSIG00000002589) #21	KCNJ8 (ENSPSIG00000002574) #22
Anura	ANCESTRAL SPECIES	84	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a #7	ENSGT00910000144343 #8	ENSGT00390000001810 #12	ENSGT00390000004708 #13	ENSGT00530000063722.a #14	ENSGT00390000009532.A.d.a #15	ENSGT00940000156122 #16	ENSGT00950000182939.b.a.b #17	ENSGT00390000000212 #18	ENSGT01030000234535.D #19	ENSGT00940000163137	ENSGT00390000004237 #20	ENSGT00940000156680.b.a.b ##21	ENSGT00990000203615.a.a.b #22	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.b.a.b.b #31	ENSGT01080000257336.b.e.b.a.b.a #35	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728.b	ENSGT00940000159982	ENSGT00940000153908.a
Frog	MODERN SPECIES	3	ENSXETG00000044035	strap (ENSXETG00000022527)	dera (ENSXETG00000043295)	SLC15A5 (ENSXETG00000043766)	mgst1 (ENSXETG00000043021)	lmo3 (ENSXETG00000045186)	pik3c2g (ENSXETG00000045201)	PLEKHA5 (ENSXETG00000049398)	aebp2 (ENSXETG00000042588)	ENSXETG00000043639	PDE3A (ENSXETG00000048782)	slco1c1 (ENSXETG00000048328) ##31	slco1b3 (ENSXETG00000012089) #35	slco1a2 (ENSXETG00000000896) ##21	cmas (ENSXETG00000047246) #20	kcnj8 (ENSXETG00000049204) #22	kiss2 (ENSXETG00000034273)	golt1b (ENSXETG00000047518) #26	recql (ENSXETG00000013524) #27	pyroxd1 (ENSXETG00000044644) #29	iapp (ENSXETG00000042033) #30	sult6b1l (ENSXETG00000036121)	c2cd5 (ENSXETG00000048325) #18	ETNK1 (ENSXETG00000042522) #17	sox5 (ENSXETG00000026458) #16	ENSXETG00000044512	ENSXETG00000047798	ENSXETG00000049280	bcat1 (ENSXETG00000048484) #15	irag2 (ENSXETG00000030622) #14	dnai7 (ENSXETG00000048107) #13
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000013095	ETNK1 (ENSLLEG00000013009) #17	C2CD5 (ENSLLEG00000012142) #18	ST8SIA1 (ENSLLEG00000012081) #19	ENSLLEG00000012075	ENSLLEG00000012019	ENSLLEG00000011971	CMAS (ENSLLEG00000011902) #20	ENSLLEG00000011881	ENSLLEG00000011869	ENSLLEG00000011853	ENSLLEG00000011841	ENSLLEG00000011827	ENSLLEG00000011667 ##21	ENSLLEG00000011610	KCNJ8 (ENSLLEG00000011571) #22	ENSLLEG00000011547	GYS2 (ENSLLEG00000011382) #24	SPX (ENSLLEG00000011140) #25	RECQL (ENSLLEG00000011013) #27	PYROXD1 (ENSLLEG00000010858) #29	ENSLLEG00000010832	IAPP (ENSLLEG00000010771) #30	ENSLLEG00000010746	ENSLLEG00000010698	SLCO1A2 (ENSLLEG00000010581) #31	ENSLLEG00000010029 #35	ENSLLEG00000009935	ENSLLEG00000009894	ENSLLEG00000009870	ENSLLEG00000009829
Coelacanth	MODERN SPECIES	704															ABCC9 (ENSLACG00000001982) #21	KCNJ8 (ENSLACG00000006799) #22	LDHB (ENSLACG00000008558) #23	kiss2 (ENSLACG00000008990)	GYS2 (ENSLACG00000009666) #24	GOLT1B (ENSLACG00000011135) #26	RECQL (ENSLACG00000011482) #27	PYROXD1 (ENSLACG00000011847) #29	IAPP (ENSLACG00000012440) #30	ENSLACG00000012665 #35	ENSLACG00000013015	SLCO1A2 (ENSLACG00000013613) #31	PDE3A (ENSLACG00000014353)
Actinopterygii	ANCESTRAL SPECIES	239															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000153525 #23	ENSGT00540000073481	ENSGT00390000018612.a.b #24	ENSGT00390000012501 #25	ENSGT00390000014507.a #26	ENSGT00940000157013 #27	ENSGT00390000014894 #29	ENSGT00510000048671 #30	ENSGT01080000257336.b.e.a.a ##31	ENSGT01080000257336.b.e.b.a.a ##31	ENSGT00940000156628	ENSGT00510000048519	ENSGT00940000155728	ENSGT00940000159950	ENSGT00940000159982
Neopterygii	ANCESTRAL SPECIES	654															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Osteoglossocephalai	ANCESTRAL SPECIES	740															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Osteoglossiformes	ANCESTRAL SPECIES	78	ENSGT00940000157529.h	ENSGT00940000158636.c	ENSGT00530000063554.b	ENSGT00940000158792	ENSGT00530000063868.b	ENSGT01100000263537.b.a.b	ENSGT00390000013052	ENSGT00810000125439.B.c.a.a	ENSGT00950000182818.B	ENSGT00950000183093.A.a	ENSGT00940000164657	ENSGT00940000157255.c.a	ENSGT00940000158319	ENSGT01020000230394.e.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237 #20	ENSGT00390000006791	ENSGT00950000183194.b	ENSGT00950000183194.a.a.i	ENSGT00940000160061	ENSGT00940000162970	ENSGT00940000162446	ENSGT00940000154795.ub	ENSGT00950000182931.B.a.a.k	ENSGT00950000182956.b.b.a.b	ENSGT00940000166088	ENSGT00940000159852.a	ENSGT00940000159852.b.a	ENSGT00390000013709.b.j	ENSGT00940000157097
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	11	PRICKLE1 (ENSSFOG00015005176)	ADAMTS20 (ENSSFOG00015005220)	pus7l (ENSSFOG00015005598)	IRAK4 (ENSSFOG00015005625)	ENSSFOG00015033023	twf1b (ENSSFOG00015005694)	TMEM117 (ENSSFOG00015005744)	NELL2 (ENSSFOG00015005776)	prl2 (ENSSFOG00015005864)	ENSSFOG00015024380	szl (ENSSFOG00015005882)	NUAK1 (ENSSFOG00015026223)	appl2 (ENSSFOG00015005927)	PLXNB2 (ENSSFOG00015006002)	abcc9 (ENSSFOG00015006097) #21	kcnj8 (ENSSFOG00015030193) #22	ENSSFOG00015031487	SHISAL1 (ENSSFOG00015027702)	parvg (ENSSFOG00015006274)	parvb (ENSSFOG00015006300)	ENSSFOG00015006352	ENSSFOG00015006409	SRPK2 (ENSSFOG00015006488)	ENSSFOG00015006532	TEAD4 (ENSSFOG00015006612)	ENSSFOG00015026228	ENSSFOG00015006686	cdkn1bb (ENSSFOG00015006705)	pparaa (ENSSFOG00015026702)	WNT7B (ENSSFOG00015006751)	fbln1 (ENSSFOG00015006783)
Asian bonytongue	MODERN SPECIES	20	ENSSFOG00015001714	tmem263 (ENSSFOG00015029590)	tnnt2c (ENSSFOG00015001731)	si:ch73-62b13.1 (ENSSFOG00015001750)	ENSSFOG00015001755	zgc:153031 (ENSSFOG00015001770)	cry1b (ENSSFOG00015001818)	btbd11a (ENSSFOG00015001877)	apex1 (ENSSFOG00015001948)	ENSSFOG00015030362	mlc1 (ENSSFOG00015001979)	si:ch211-214j24.10 (ENSSFOG00015001996)	ENSSFOG00015029875	drc1 (ENSSFOG00015032400)	TUBGCP6 (ENSSFOG00015002033)	kcnj8 (ENSSFOG00015002076) #22	cmasa (ENSSFOG00015002083) #20	ENSSFOG00015002124	shisal1a (ENSSFOG00015002136)	PARVB (ENSSFOG00015002167)	rint1 (ENSSFOG00015002236)	pus7 (ENSSFOG00015002315)	ENSSFOG00015002398	ADCK2 (ENSSFOG00015002418)	DENND2A (ENSSFOG00015002425)	ENSSFOG00015002449	mrps35 (ENSSFOG00015027347)	cdkn1bb (ENSSFOG00015002466)	ENSSFOG00015033244	yars2 (ENSSFOG00015002490)	cdpf1 (ENSSFOG00015002515)
P. kingsleyae	MODERN SPECIES	44	pus7l (ENSPKIG00000023027)	IRAK4 (ENSPKIG00000023007)	twf1b (ENSPKIG00000022975)	ENSPKIG00000022949	TMEM117 (ENSPKIG00000022930)	NELL2 (ENSPKIG00000022842)	prl2 (ENSPKIG00000022777)	DBX2 (ENSPKIG00000022766)	szl (ENSPKIG00000022750)	NUAK1 (ENSPKIG00000022728)	appl2 (ENSPKIG00000022606)	PLXNB2 (ENSPKIG00000022462)	ENSPKIG00000022401	ENSPKIG00000022389 ##21	ENSPKIG00000022376	kcnj8 (ENSPKIG00000022366) #22	SHISAL1 (ENSPKIG00000022343)	parvg (ENSPKIG00000022272)	parvb (ENSPKIG00000022188)	hdac10 (ENSPKIG00000022112)	ENSPKIG00000022081	ENSPKIG00000022012	SRPK2 (ENSPKIG00000021935)	DENND2A (ENSPKIG00000021835)	TEAD4 (ENSPKIG00000021791)	cdkn1bb (ENSPKIG00000021775)	yars2 (ENSPKIG00000021759)	PPARA (ENSPKIG00000021739)	ENSPKIG00000021726	WNT7B (ENSPKIG00000021706)	fbln1 (ENSPKIG00000021644)
Clupeocephala	ANCESTRAL SPECIES	501												ENSGT00940000157255.d	ENSGT00940000157255.c.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Otomorpha	ANCESTRAL SPECIES	258	ENSGT00940000155067.a	ENSGT00940000156246.c.b	ENSGT01050000244882.b.d	ENSGT00390000003444	ENSGT00940000154738.a.r	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Clupeiformes	ANCESTRAL SPECIES	32	ENSGT00940000154738.a.r	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00810000125439.B.c.a	ENSGT00950000182818.B.c	ENSGT00940000157255.c.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237 #20	ENSGT00940000162970	ENSGT01030000235320	ENSGT00940000156878.i.b.b	ENSGT00940000153772.A	ENSGT00500000045001	ENSGT00390000015968	ENSGT00940000156375	ENSGT00940000157129.f.a	ENSGT00940000155834.i.a	ENSGT00390000001775.B	ENSGT00390000011492.a	ENSGT00390000007134	ENSGT00940000154045.a	ENSGT00390000003057
Atlantic herring	MODERN SPECIES	7	PTPRO (ENSCHAG00000014426)	si:cabz01085950.1 (ENSCHAG00000015370)	ENSCHAG00000015395	lhfpl3 (ENSCHAG00000017020)	orc5 (ENSCHAG00000017056)	guca1a (ENSCHAG00000017174)	ENSCHAG00000017197	hcls1 (ENSCHAG00000017216)	llph (ENSCHAG00000017286)	ENSCHAG00000017301	ENSCHAG00000017306	plxnb2a.1 (ENSCHAG00000017316)	ENSCHAG00000018199	ENSCHAG00000018216 ##21	abcc9 (ENSCHAG00000018288) #21	kcnj8 (ENSCHAG00000018873) #22	cmasa (ENSCHAG00000018948) #20	shisal1a (ENSCHAG00000019055)	ENSCHAG00000019064	smfn (ENSCHAG00000019135)	ARF5 (ENSCHAG00000019154)	gcc1 (ENSCHAG00000019231)	ENSCHAG00000019252	ENSCHAG00000019265	ENSCHAG00000019276	DDX24 (ENSCHAG00000019326)	lta4h (ENSCHAG00000001018)	elk3 (ENSCHAG00000001649)	cdk17 (ENSCHAG00000001697)	ENSCHAG00000001742	ENSCHAG00000001756
Denticle herring	MODERN SPECIES	6	yaf2 (ENSDCDG00000034919)	zcrb1 (ENSDCDG00000034921)	pphln1 (ENSDCDG00000034925)	prickle1b (ENSDCDG00000034932)	pus7l (ENSDCDG00000034937)	twf1b (ENSDCDG00000034941)	NELL2 (ENSDCDG00000034970)	prl2 (ENSDCDG00000035022)	ENSDCDG00000035029	PLXNB2 (ENSDCDG00000035117)	NELL2 (ENSDCDG00000035315)	prl2 (ENSDCDG00000035399)	ENSDCDG00000035401	PLXNB2 (ENSDCDG00000035409)	abcc9 (ENSDCDG00000035428) #21	kcnj8 (ENSDCDG00000035469) #22	cmasa (ENSDCDG00000035472) #20	shisal1a (ENSDCDG00000035479)	ENSDCDG00000035480	ENSDCDG00000035481	arf5 (ENSDCDG00000035484)	gcc1 (ENSDCDG00000035491)	ENSDCDG00000035494	ENSDCDG00000035498	ENSDCDG00000035501	ENSDCDG00000035502	lta4h (ENSDCDG00000035506)	elk3 (ENSDCDG00000035515)	cdk17 (ENSDCDG00000035537)	phyh (ENSDCDG00000035599)	ucmaa (ENSDCDG00000035602)
Otophysi	ANCESTRAL SPECIES	59	ENSGT00530000063347.B	ENSGT00940000159926	ENSGT00390000018647	ENSGT00390000003444	ENSGT00940000154738.a.r	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.i #20	ENSGT00940000156566	ENSGT00940000157480	ENSGT00390000015216	ENSGT00940000156619	ENSGT00510000047764	ENSGT00940000155472.a.b.a.a	ENSGT00940000153588.a.a.a	ENSGT00940000159122.h	ENSGT00390000004697	ENSGT00940000164581.A.a.b	ENSGT00530000063472.a	ENSGT00940000158632	ENSGT00940000155580.b.a.b	ENSGT00940000158225.i.a
Cyprinoidei	ANCESTRAL SPECIES	28	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00810000125439.B.c.a	ENSGT00950000182818.B.c	ENSGT00940000157255.c.b	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.i #20	ENSGT01100000263519.A.b.b.a.a	ENSGT00940000153272.a.b.d	ENSGT00940000153272.a.b.c	ENSGT00940000156443	ENSGT01020000230346.B	ENSGT01070000253775.a.d.a.b.a	ENSGT00940000159484	ENSGT00940000157206	ENSGT00390000016897.c	ENSGT00940000155977.e	ENSGT00390000006086	ENSGT00390000004852.a.b	ENSGT00390000006835	ENSGT01050000244850.B
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	2	ENSGT00940000154738.a.r.a	ENSGT00940000155419.c.b.a	ENSGT00940000155915.b.b	ENSGT00950000183062.a.a.b.b.a.d	ENSGT00940000156242.c.b.b	ENSGT00390000013995.b.b.k.a.a.b	ENSGT00730000111061.i.a	ENSGT00390000016228.a.a.a	ENSGT00940000157529.i.b.b	ENSGT00530000063868.b.l.d.a	ENSGT00810000125439.B.c.a.e	ENSGT00950000182818.B.c.c	ENSGT00940000157255.c.b.l	ENSGT01020000230394.e.a.a.a.a.b.d	ENSGT00940000156680.b.e #21	ENSGT00990000203615.a.a.b.c #22	ENSGT00390000004237.i.d #20	ENSGT00390000006791.`b.b	ENSGT01100000263519.A.b.b.a.a	ENSGT00940000153272.a.b.d.f	ENSGT00940000153272.a.b.c.f	ENSGT00940000156443.p	ENSGT01020000230346.B.p	ENSGT01070000253775.a.d.a.b.a.b	ENSGT00940000159484.m	ENSGT00940000157206.k	ENSGT00390000016897.c.a	ENSGT00940000155977.e.a	ENSGT00390000006086.i	ENSGT00390000004852.a.a	ENSGT00390000006835.p
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	33	lum (ENSCARG00000004448)	kera (ENSCARG00000004434)	ENSCARG00000004421	epyc (ENSCARG00000004404)	si:dkeyp-38g8.5 (ENSCARG00000004388)	atp2b1a (ENSCARG00000002553)	mest (ENSCARG00000002255)	copg2 (ENSCARG00000002139)	ucn3l (ENSCARG00000002113)	si:dkey-117n7.5 (ENSCARG00000002095)	ENSCARG00000002056	LRGUK (ENSCARG00000002033)	exoc4 (ENSCARG00000001692)	chchd3a (ENSCARG00000001618)	plxna4 (ENSCARG00000001440)	kcnj8 (ENSCARG00000001393) #22	cmasa (ENSCARG00000001371) #20	shisal1a (ENSCARG00000001363)	akr1b1.1 (ENSCARG00000001243)	akr1b1.2 (ENSCARG00000001158)	prdm4 (ENSCARG00000001117)	psmc2 (ENSCARG00000001101)	slc26a5 (ENSCARG00000001039)	tspan33a (ENSCARG00000001001)	smo (ENSCARG00000000953)	cax1 (ENSCARG00000000928)	klhdc10 (ENSCARG00000000915)	zc3hc1 (ENSCARG00000000902)	ube2h (ENSCARG00000000889)	nrf1 (ENSCARG00000000850)	ENSCARG00000000813
Goldfish	MODERN SPECIES	33	tcp11l2 (ENSCARG00000011435)	pkp2 (ENSCARG00000011469)	ENSCARG00000011486	pdzrn4 (ENSCARG00000011492)	gxylt1b (ENSCARG00000011502)	yaf2 (ENSCARG00000011519)	zcrb1 (ENSCARG00000011524)	pphln1 (ENSCARG00000011543)	prickle1b (ENSCARG00000011561)	twf1b (ENSCARG00000011567)	NELL2 (ENSCARG00000011776)	prl2 (ENSCARG00000016359)	ENSCARG00000016374	PLXNB2 (ENSCARG00000002540)	abcc9 (ENSCARG00000002932) #21	kcnj8 (ENSCARG00000003319) #22	ENSCARG00000003330	cmasa (ENSCARG00000003338) #20	shisal1a (ENSCARG00000003357)	akr1b1.1 (ENSCARG00000003372)	akr1b1.2 (ENSCARG00000003406)	prdm4 (ENSCARG00000003416)	psmc2 (ENSCARG00000003421)	slc26a5 (ENSCARG00000003552)	tspan33a (ENSCARG00000006672)	smo (ENSCARG00000006685)	cax1 (ENSCARG00000006742)	klhdc10 (ENSCARG00000006764)	zc3hc1 (ENSCARG00000006771)	ENSCARG00000006786	nrf1 (ENSCARG00000006810)
Cyprininae_a	ANCESTRAL SPECIES	213	ENSGT00940000154738.a.r.a	ENSGT00940000155419.c.b.a	ENSGT00940000155915.b.b	ENSGT00950000183062.a.a.b.b.a.d	ENSGT00940000156242.c.b.b	ENSGT00390000013995.b.b.k.a.a.b	ENSGT00730000111061.i.a	ENSGT00390000016228.a.a.a	ENSGT00940000157529.i.b.b	ENSGT00530000063868.b.l.d.a	ENSGT00810000125439.B.c.a.e	ENSGT00950000182818.B.c.c	ENSGT00940000157255.c.b.l	ENSGT01020000230394.e.a.a.a.a.b.d	ENSGT00940000156680.b.e #21	ENSGT00990000203615.a.a.b.c #22	ENSGT00390000004237.i.d #20	ENSGT00390000006791.`b.b	ENSGT01100000263519.A.b.b.a.a	ENSGT00940000153272.a.b.d.f	ENSGT00940000153272.a.b.c.f	ENSGT00940000156443.p	ENSGT01020000230346.B.p	ENSGT01070000253775.a.d.a.b.a.b	ENSGT00940000159484.m	ENSGT00940000157206.k	ENSGT00390000016897.c.a	ENSGT00940000155977.e.a	ENSGT00390000006086.i	ENSGT00390000004852.a.b.l
Golden-line barbel	MODERN SPECIES	89	nrcama (ENSSGRG00000045487)	cntn1b (ENSSGRG00000050186)	pdzrn4 (ENSSGRG00000050690)	gxylt1b (ENSSGRG00000050691)	yaf2 (ENSSGRG00000050692)	zcrb1 (ENSSGRG00000050693)	pphln1 (ENSSGRG00000050694)	prickle1b (ENSSGRG00000050696)	pus7l (ENSSGRG00000050699)	twf1b (ENSSGRG00000050700)	NELL2 (ENSSGRG00000050712)	prl2 (ENSSGRG00000051121)	ENSSGRG00000051123	PLXNB2 (ENSSGRG00000051135)	abcc9 (ENSSGRG00000051582) #21	kcnj8 (ENSSGRG00000052521) #22	cmasa (ENSSGRG00000052523) #20	shisal1a (ENSSGRG00000052525)	ENSSGRG00000052527	akr1b1.1 (ENSSGRG00000052529)	akr1b1.2 (ENSSGRG00000052544)	psmc2 (ENSSGRG00000052715)	slc26a5 (ENSSGRG00000052717)	tspan33a (ENSSGRG00000052718)	smo (ENSSGRG00000052719)	cax1 (ENSSGRG00000052721)	klhdc10 (ENSSGRG00000052727)	zc3hc1 (ENSSGRG00000052729)
Common carp reference	MODERN SPECIES	8	ENSCCRG00000040957	nrcama (ENSCCRG00000022642)	cntn1b (ENSCCRG00000019823)	pdzrn4 (ENSCCRG00000076324)	gxylt1b (ENSCCRG00000022249)	yaf2 (ENSCCRG00000055663)	zcrb1 (ENSCCRG00000052279)	PPHLN1 (ENSCCRG00000052277)	prickle1b (ENSCCRG00000017147)	twf1b (ENSCCRG00000051869)	ENSCCRG00000069855	prl2 (ENSCCRG00000079802)	ENSCCRG00000025435	ENSCCRG00000021367	abcc9 (ENSCCRG00000021241) #21	kcnj8 (ENSCCRG00000021232) #22	cmasa (ENSCCRG00000067108) #20	shisal1a (ENSCCRG00000069623)	si:dkey-14k9.3 (ENSCCRG00000065755)	akr1b1.1 (ENSCCRG00000016111)	akr1b1.2 (ENSCCRG00000001707)	prdm4 (ENSCCRG00000001714)	psmc2 (ENSCCRG00000062590)	slc26a5 (ENSCCRG00000001767)	tspan33a (ENSCCRG00000017834)	smo (ENSCCRG00000017052)	cax1 (ENSCCRG00000017004)	klhdc10 (ENSCCRG00000035052)	zc3hc1 (ENSCCRG00000035035)	ube2h (ENSCCRG00000054601)	nrf1 (ENSCCRG00000016935)
Cyprininae	ANCESTRAL SPECIES	44	ENSGT00940000156242.c.b.a	ENSGT00390000013995.b.b.k.a.b	ENSGT00730000111061.j	ENSGT00390000013995.b.b.k.a.a.a	ENSGT00730000111061.i.b	ENSGT00390000016228.a.a.b	ENSGT00940000157529.i.b.a	ENSGT00530000063554.b	ENSGT00530000063868.b.l.d.b	ENSGT00810000125439.B.c.a.f	ENSGT00950000182818.B.c.d	ENSGT00940000157255.c.b.k	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b.c	ENSGT00940000156680.b.f #21	ENSGT00990000203615.a.a.b.d #22	ENSGT00390000004237.i.c #20	ENSGT00390000006791.`b.a	ENSGT00940000153272.a.b.d.e	ENSGT00940000153272.a.b.c.e	ENSGT00940000156443.o	ENSGT01020000230346.B.o	ENSGT01070000253775.a.d.a.b.a.a	ENSGT00940000159484.n	ENSGT00940000157206.l	ENSGT00390000016897.c.b	ENSGT00940000155977.e.b	ENSGT00390000006086.j	ENSGT00390000004852.a.b	ENSGT00390000006835.o	ENSGT01050000244850.B.bc.b
Cyprininae_a	ANCESTRAL SPECIES	123	ENSGT00940000155915.b.a	ENSGT00950000183062.a.a.b.b.a.c	ENSGT00940000156242.c.b.a	ENSGT00390000013995.b.b.k.a.a.a	ENSGT00730000111061.i.b	ENSGT00390000016228.a.a.b	ENSGT00940000157529.i.b.a	ENSGT00530000063554.b	ENSGT00530000063868.b.l.d.b	ENSGT00810000125439.B.c.a.f	ENSGT00950000182818.B.c.d	ENSGT00940000157255.c.b.k	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b.c	ENSGT00940000156680.b.f #21	ENSGT00990000203615.a.a.b.d #22	ENSGT00390000004237.i.c #20	ENSGT00390000006791.`b.a	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00940000153272.a.b.d.e	ENSGT00940000153272.a.b.c.e	ENSGT00940000156443.o	ENSGT01020000230346.B.o	ENSGT01070000253775.a.d.a.b.a.a	ENSGT00940000159484.n	ENSGT00940000157206.l	ENSGT00390000016897.c.b	ENSGT00940000155977.e.b	ENSGT00390000006086.j	ENSGT00390000004852.a.b.k.b	ENSGT00390000004852.a.b.k.a
Golden-line barbel	MODERN SPECIES		nrcama (ENSSGRG00000000923)	cntn1b (ENSSGRG00000000926)	pdzrn4 (ENSSGRG00000001329)	pphln1 (ENSSGRG00000001340)	gxylt1b (ENSSGRG00000001353)	yaf2 (ENSSGRG00000001358)	prickle1b (ENSSGRG00000001360)	pus7l (ENSSGRG00000001367)	twf1b (ENSSGRG00000001399)	NELL2 (ENSSGRG00000001888)	prl2 (ENSSGRG00000004889)	ENSSGRG00000004892	ENSSGRG00000004895	PLXNB2 (ENSSGRG00000004903)	abcc9 (ENSSGRG00000005158) #21	kcnj8 (ENSSGRG00000010274) #22	ENSSGRG00000010277	cmasa (ENSSGRG00000010280) #20	shisal1a (ENSSGRG00000010295)	ENSSGRG00000010296	akr1b1.1 (ENSSGRG00000010298)	ENSSGRG00000010299	prdm4 (ENSSGRG00000010302)	psmc2 (ENSSGRG00000010303)	slc26a5 (ENSSGRG00000010340)	tspan33a (ENSSGRG00000012080)	cax1 (ENSSGRG00000012093)	klhdc10 (ENSSGRG00000012279)	zc3hc1 (ENSSGRG00000012375)	ube2h (ENSSGRG00000012435)	nrf1 (ENSSGRG00000012475)
Common carp reference	MODERN SPECIES	36	nrcama (ENSCCRG00000021202)	pdzrn4 (ENSCCRG00000059716)	gxylt1b (ENSCCRG00000051852)	yaf2 (ENSCCRG00000064961)	zcrb1 (ENSCCRG00000051853)	PPHLN1 (ENSCCRG00000051854)	prickle1b (ENSCCRG00000051855)	pus7l (ENSCCRG00000051866)	ENSCCRG00000054579	prl2 (ENSCCRG00000021328)	ENSCCRG00000058042	ENSCCRG00000076109	ENSCCRG00000017189	ENSCCRG00000016731	abcc9 (ENSCCRG00000012185) #21	kcnj8 (ENSCCRG00000012123) #22	cmasa (ENSCCRG00000011787) #20	shisal1a (ENSCCRG00000058971)	akr1b1.1 (ENSCCRG00000059631)	akr1b1.2 (ENSCCRG00000063182)	prdm4 (ENSCCRG00000060676)	psmc2 (ENSCCRG00000073289)	tspan33a (ENSCCRG00000002258)	smo (ENSCCRG00000002259)	ENSCCRG00000017868	klhdc10 (ENSCCRG00000002278)	zc3hc1 (ENSCCRG00000002284)	ube2h (ENSCCRG00000074080)	nrf1 (ENSCCRG00000016988)	ENSCCRG00000002556	plxna4 (ENSCCRG00000081083)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	21	kiss2 (ENSCARG00000010604)	ldhba (ENSCARG00000010612) #23	slc25a3a (ENSCARG00000010629)	tmpoa (ENSCARG00000010673)	strap (ENSCARG00000010722)	ETNK1 (ENSCARG00000010762) #17	sox5 (ENSCARG00000010956) #16	dnai7 (ENSCARG00000014490) #13	lrmp (ENSCARG00000014512) #14	bcat1 (ENSCARG00000014583) #15	igf1 (ENSCARG00000016190)	ENSCARG00000016249	parpbp (ENSCARG00000016253)	nup37 (ENSCARG00000016266)	ENSCARG00000016320	kcnj8 (ENSCARG00000016331) #22	cmasa (ENSCARG00000016343) #20	ENSCARG00000016358	ENSCARG00000016397	ENSCARG00000016414	ENSCARG00000016417	ENSCARG00000016423	ENSCARG00000016432	ENSCARG00000016443	ENSCARG00000016460	syt10 (ENSCARG00000016475)	ENSCARG00000016547	stab2 (ENSCARG00000017453)	wnt16 (ENSCARG00000021589)	CPED1 (ENSCARG00000021598)	ing3 (ENSCARG00000021616)
Goldfish	MODERN SPECIES	21	tspan11 (ENSCARG00000013521)	ENSCARG00000013540	ENSCARG00000013543	fnta (ENSCARG00000013547)	gstp1.2 (ENSCARG00000013579)	trpc3 (ENSCARG00000013595)	ENSCARG00000013695	trim35-27 (ENSCARG00000013699)	adra2da (ENSCARG00000013723)	ENSCARG00000013729	prl2 (ENSCARG00000013736)	NUAK1 (ENSCARG00000013746)	ENSCARG00000013749	PLXNB2 (ENSCARG00000013911)	abcc9 (ENSCARG00000015857) #21	kcnj8 (ENSCARG00000016544) #22	shisal1a (ENSCARG00000016557)	akr1b1.1 (ENSCARG00000016575)	prdm4 (ENSCARG00000016676)	psmc2 (ENSCARG00000016887)	slc26a5 (ENSCARG00000016972)	tspan33a (ENSCARG00000017685)	smo (ENSCARG00000017709)	klhdc10 (ENSCARG00000017818)	zc3hc1 (ENSCARG00000017929)	ube2h (ENSCARG00000017940)	nrf1 (ENSCARG00000017975)	plxna4 (ENSCARG00000018105)	chchd3a (ENSCARG00000018422)	exoc4 (ENSCARG00000018494)	ucn3l (ENSCARG00000052082)
Zebrafish	MODERN SPECIES	19	prickle1b (ENSDARG00000045694)	ENSDARG00000109403	ENSDARG00000113738	ENSDARG00000093588	pus7l (ENSDARG00000069780)	twf1b (ENSDARG00000011661)	NELL2 (ENSDARG00000062797)	prl2 (ENSDARG00000018744)	NUAK1 (ENSDARG00000020086)	plxnb2a.1 (ENSDARG00000003811)	ENSDARG00000094799	plxnb2a.2 (ENSDARG00000077090)	plxnb2a.3 (ENSDARG00000079892)	abcc9 (ENSDARG00000015985) #21	ENSDARG00000112970	kcnj8 (ENSDARG00000045589) #22	cmasa (ENSDARG00000057334) #20	shisal1a (ENSDARG00000045594)	si:dkey-14k9.3 (ENSDARG00000045595)	akr1b1.1 (ENSDARG00000006215)	akr1b1.2 (ENSDARG00000045598)	prdm4 (ENSDARG00000017366)	psmc2 (ENSDARG00000020101)	slc26a5 (ENSDARG00000022424)	tspan33a (ENSDARG00000004497)	smo (ENSDARG00000002952)	cax1 (ENSDARG00000045601)	klhdc10 (ENSDARG00000007764)	zc3hc1 (ENSDARG00000062651)	ube2h (ENSDARG00000000019)	nrf1 (ENSDARG00000000018)
Characiphysae	ANCESTRAL SPECIES	112	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00810000125439.B.c.a	ENSGT00950000182818.B.c	ENSGT00940000157255.c.b	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.i #20
Channel catfish	MODERN SPECIES	10	SCYL2 (ENSIPUG00000007023)	ENSIPUG00000006978	si:ch211-244b2.4 (ENSIPUG00000006970)	ST8SIA1 (ENSIPUG00000006940) #19	tnni1d (ENSIPUG00000006896)	ENSIPUG00000006879	Trhde (ENSIPUG00000006726)	Twf1 (ENSIPUG00000006667)	ENSIPUG00000006650	NELL2 (ENSIPUG00000006599)	prl2 (ENSIPUG00000006580)	nuak1 (ENSIPUG00000006548)	ENSIPUG00000006529	plxnb2a.1 (ENSIPUG00000006412)	abcc9 (ENSIPUG00000006065) #21	Kcnj8 (ENSIPUG00000006033) #22	cmasa (ENSIPUG00000006011) #20	ENSIPUG00000005999	shisal1a (ENSIPUG00000005983)	ENSIPUG00000005956	ENSIPUG00000005927	ENSIPUG00000005924	si:ch211-214j24.10 (ENSIPUG00000005916)	osgep (ENSIPUG00000005824)	apex1 (ENSIPUG00000005799)	ENSIPUG00000005775	ENSIPUG00000005755	ENSIPUG00000005744	MAPK11 (ENSIPUG00000005670)	mapk12b (ENSIPUG00000005633)	rpap3 (ENSIPUG00000005618)
Characiphysae_b	ANCESTRAL SPECIES	31	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00810000125439.B.c.a	ENSGT00950000182818.B.c	ENSGT00940000157255.c.b	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.i #20	ENSGT00390000006791	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT01070000254199	ENSGT00390000009992	ENSGT00940000153744.B	ENSGT00530000063540.b	ENSGT00940000165434	ENSGT00390000005508.a.b	ENSGT00940000164836	ENSGT00940000160790	ENSGT00940000156189.a.b	ENSGT00940000156749	ENSGT00390000010948	ENSGT00940000157098
Characoidei	ANCESTRAL SPECIES	260				ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a	ENSGT00730000111061	ENSGT00390000016228.a.a	ENSGT00940000157529.i.b	ENSGT00530000063554.b	ENSGT00810000125439.B.c.a	ENSGT00950000182818.B.c	ENSGT00940000157255.c.b	ENSGT00940000180254	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.i #20	ENSGT00390000006791	ENSGT01100000263533.b.b.b.a.b.a.b
Red-bellied piranha	MODERN SPECIES	308			gxylt1b (ENSPNAG00000024005)	yaf2 (ENSPNAG00000005797)	zcrb1 (ENSPNAG00000023955)	pphln1 (ENSPNAG00000023896)	prickle1b (ENSPNAG00000023827)	pus7l (ENSPNAG00000023742)	twf1b (ENSPNAG00000023729)	NELL2 (ENSPNAG00000023701)	prl2 (ENSPNAG00000023619)	NUAK1 (ENSPNAG00000023611)	ENSPNAG00000023598	plxnb2a.1 (ENSPNAG00000023590)	abcc9 (ENSPNAG00000003774) #21	kcnj8 (ENSPNAG00000023456) #22
Mexicana tetra	MODERN SPECIES	22	gxylt1b (ENSAMXG00000016560)	yaf2 (ENSAMXG00000036088)	zcrb1 (ENSAMXG00000033790)	pphln1 (ENSAMXG00000016566)	prickle1b (ENSAMXG00000016570)	pus7l (ENSAMXG00000016571)	twf1b (ENSAMXG00000032910)	ENSAMXG00000041325	NELL2 (ENSAMXG00000016579)	prl2 (ENSAMXG00000043504)	NUAK1 (ENSAMXG00000037988)	ENSAMXG00000037561	plxnb2a.1 (ENSAMXG00000019507)	ENSAMXG00000030722	abcc9 (ENSAMXG00000019554) #21	kcnj8 (ENSAMXG00000019562) #22	cmasa (ENSAMXG00000042802) #20	shisal1a (ENSAMXG00000033946)	ENSAMXG00000033252	tmem168a (ENSAMXG00000040874)	ifrd1 (ENSAMXG00000020926)	dock4b (ENSAMXG00000020829)	LRRN3 (ENSAMXG00000025297)	tnni4a (ENSAMXG00000038183)	CALD1 (ENSAMXG00000020776)	tnnt2e (ENSAMXG00000020761)	ENSAMXG00000038902	phyh (ENSAMXG00000003955)	ENSAMXG00000029918	mcm10 (ENSAMXG00000003979)	pparaa (ENSAMXG00000034838)
Electric eel	MODERN SPECIES	583											trip12 (ENSEEEG00000000974)	ENSEEEG00000003266	RASA2 (ENSEEEG00000003280)	plxnb2a.1 (ENSEEEG00000003409)	abcc9 (ENSEEEG00000003616) #21	kcnj8 (ENSEEEG00000003619) #22	cmasa (ENSEEEG00000003622) #20
Euteleosteomorpha	ANCESTRAL SPECIES	529															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Acanthomorphata	ANCESTRAL SPECIES	415														ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Euacanthomorphacea	ANCESTRAL SPECIES	214														ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005020465	ENSMMDG00005020462	kics2 (ENSMMDG00005020461)	srgap1b (ENSMMDG00005016922)	AVPR1A (ENSMMDG00005016844)	ENSMMDG00005016829	ENSMMDG00005016820	CD9 (ENSMMDG00005016814)	cwf19l1 (ENSMMDG00005016808)	dmtf1 (ENSMMDG00005016652)	tmem243b (ENSMMDG00005016646)	meig1 (ENSMMDG00005016642)	dclre1c (ENSMMDG00005016641)	plxnb2a.1 (ENSMMDG00005016350)	abcc9 (ENSMMDG00005015623) #21	kcnj8 (ENSMMDG00005015602) #22	ENSMMDG00005015601	ovch1 (ENSMMDG00005015598)	ENSMMDG00005015593	stab2 (ENSMMDG00005015349)	ENSMMDG00005015334	wnt16 (ENSMMDG00005015331)	ing3 (ENSMMDG00005015329)	tspan12 (ENSMMDG00005015326)	kcnd2 (ENSMMDG00005015324)	FLNC (ENSMMDG00005015121)	sco2 (ENSMMDG00005015102)	ncaph2 (ENSMMDG00005015098)	socs2 (ENSMMDG00005015094)	cradd (ENSMMDG00005015092)	PTPRO (ENSMMDG00005014901)
Percomorphaceae	ANCESTRAL SPECIES	35															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Tiger tail seahorse	MODERN SPECIES	472	usp44 (ENSHCOG00000003761)	metap2b (ENSHCOG00000003805)	vezt (ENSHCOG00000003894)	ENSHCOG00000003911	ndufa12 (ENSHCOG00000003937)	rab3ip (ENSHCOG00000003946)	ENSHCOG00000003958	UPF2 (ENSHCOG00000004025)	slc35e3 (ENSHCOG00000004052)	nup107 (ENSHCOG00000004073)	mdm2 (ENSHCOG00000004090)	plxnb2a.1 (ENSHCOG00000004130)	abcc9 (ENSHCOG00000004171) #21	ENSHCOG00000004184	ECHDC3 (ENSHCOG00000004203)	kcnj8 (ENSHCOG00000004274) #22	ENSHCOG00000000114	gata3 (ENSHCOG00000004304)	acot15 (ENSHCOG00000004322)	CD9 (ENSHCOG00000004354)	cwf19l1 (ENSHCOG00000004362)	dmtf1 (ENSHCOG00000004386)	tmem243b (ENSHCOG00000004408)	ENSHCOG00000004416	ENSHCOG00000004420	ENSHCOG00000004431	ENSHCOG00000004454	kcnd2 (ENSHCOG00000004507)	tspan12 (ENSHCOG00000004531)	cct2 (ENSHCOG00000004567)	nots (ENSHCOG00000004940)
Percomorphaceae_B	ANCESTRAL SPECIES	21															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Ovalentaria	ANCESTRAL SPECIES	22	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Ovalentaria_B	ANCESTRAL SPECIES	23	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Pomacentridae	ANCESTRAL SPECIES	110	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Pomacentridae_A	ANCESTRAL SPECIES	146	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926
Amphiprion	ANCESTRAL SPECIES	178	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926
Orange clownfish	MODERN SPECIES	13	AVPR1A (ENSAPEG00000019349)	srgap1b (ENSAPEG00000019261)	kics2 (ENSAPEG00000019215)	TMEM19 (ENSAPEG00000019203)	rab3ip (ENSAPEG00000019183)	ENSAPEG00000019166	UPF2 (ENSAPEG00000019084)	slc35e3 (ENSAPEG00000019019)	nup107 (ENSAPEG00000018999)	mdm2 (ENSAPEG00000018985)	plxnb2a.1 (ENSAPEG00000018883)	ENSAPEG00000018796	ENSAPEG00000018765	ENSAPEG00000018762	abcc9 (ENSAPEG00000018647) #21	kcnj8 (ENSAPEG00000018547) #22	ENSAPEG00000018509	ECHDC3 (ENSAPEG00000018489)	lrig3 (ENSAPEG00000018412)	zgc:165507 (ENSAPEG00000018391)	ENSAPEG00000018364	ETV6 (ENSAPEG00000018322)	si:ch73-252i11.1 (ENSAPEG00000018306)	TIMP3 (ENSAPEG00000018282)	SYN3 (ENSAPEG00000018221)	si:cabz01085950.1 (ENSAPEG00000018205)	ENSAPEG00000018194	zgc:194209 (ENSAPEG00000018113)	gnsa (ENSAPEG00000018053)	TBC1D30 (ENSAPEG00000018002)	prkcq (ENSAPEG00000017949)
Clown anemonefish	MODERN SPECIES	2090													ENSAOCG00000014061	ENSAOCG00000014165	abcc9 (ENSAOCG00000014285) #21	kcnj8 (ENSAOCG00000014300) #22	ENSAOCG00000014314	ECHDC3 (ENSAOCG00000000932)
Spiny chromis	MODERN SPECIES	44	ENSAPOG00000022861	ENSAPOG00000022847	DHX57 (ENSAPOG00000022824)	morn2 (ENSAPOG00000022743)	ENSAPOG00000022710	AHCYL2 (ENSAPOG00000022534)	tmem209 (ENSAPOG00000022461)	prdm4 (ENSAPOG00000022415)	ASCL4 (ENSAPOG00000000754)	ENSAPOG00000022387	plxnb2a.1 (ENSAPOG00000022360)	ENSAPOG00000022234	ENSAPOG00000022174	ENSAPOG00000022065	abcc9 (ENSAPOG00000022028) #21	kcnj8 (ENSAPOG00000021753) #22	ENSAPOG00000021721
Bicolor damselfish	MODERN SPECIES	1003													ENSSPAG00000018258	ENSSPAG00000018207	abcc9 (ENSSPAG00000017953) #21	kcnj8 (ENSSPAG00000017893) #22	ENSSPAG00000017879	ECHDC3 (ENSSPAG00000017840)	ENSSPAG00000017830	usp6nl (ENSSPAG00000017732)
Cichlidae	ANCESTRAL SPECIES	119													ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926
Midas cichlid	MODERN SPECIES	1067												plxnb2a.1 (ENSACIG00000005115)	ENSACIG00000005607	ENSACIG00000005635	abcc9 (ENSACIG00000005700) #21	kcnj8 (ENSACIG00000005778) #22	ECHDC3 (ENSACIG00000005850)	ENSACIG00000005875
Pseudocrenilabrinae	ANCESTRAL SPECIES	21	ENSGT00940000159226	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00940000159247	ENSGT00940000155461.A	ENSGT00940000156715.p	ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000178523	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT01010000222336.b.a.b.a.l	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.dc.b	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.b.a.a.b.b	ENSGT00940000158153.a
Nile tilapia	MODERN SPECIES	8	prkcq (ENSONIG00000017904)	ENSONIG00000034072	SFMBT2 (ENSONIG00000017905)	tmem110l (ENSONIG00000034372)	ITIH5 (ENSONIG00000017909)	itih2 (ENSONIG00000017917)	kin (ENSONIG00000028327)	atp5f1c (ENSONIG00000017924)	gata3 (ENSONIG00000017925)	celf2 (ENSONIG00000017931)	usp6nl (ENSONIG00000017936)	plxnb2a.1 (ENSONIG00000017938)	ENSONIG00000040588	ENSONIG00000034949	abcc9 (ENSONIG00000017957) #21	kcnj8 (ENSONIG00000017976) #22	ENSONIG00000021220	ECHDC3 (ENSONIG00000017977)	ENSONIG00000009935	AVPR1A (ENSONIG00000017980)	srgap1b (ENSONIG00000017981)	kics2 (ENSONIG00000017985)	TMEM19 (ENSONIG00000017986)	rab3ip (ENSONIG00000017988)	ENSONIG00000041699	UPF2 (ENSONIG00000017991)	slc35e3 (ENSONIG00000017996)	nup107 (ENSONIG00000017999)	ENSONIG00000039071	ENSONIG00000029533	ENSONIG00000018013
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.p	ENSGT00390000006837	ENSGT00940000159247	ENSGT00940000155461.A	ENSGT00940000156715.o	ENSGT00940000156715.p	ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000178523	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT01010000222336.b.a.b.a.l	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT00980000199477	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.b.a.a.b.b	ENSGT00940000158153.a
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.p	ENSGT00390000006837	ENSGT00940000159247	ENSGT00940000155461.A	ENSGT00940000156715.o	ENSGT00940000156715.p	ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000178523	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT01010000222336.b.a.b.a.l	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT00980000199477	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT00940000166983.c.b	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.b.a.a.b.b
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.p	ENSGT00390000006837	ENSGT00940000159247	ENSGT00940000155461.A	ENSGT00940000156715.o	ENSGT00940000156715.p	ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000178523	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT01010000222336.b.a.b.a.l	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT00980000199477	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT00940000166983.c.b	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.b.a.a.b.b
Haplochromini_B	ANCESTRAL SPECIES	11	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.p	ENSGT00390000006837	ENSGT00940000159247	ENSGT00940000155461.A	ENSGT00940000156715.o	ENSGT00940000156715.p	ENSGT01020000230394.e.a.a.a.a.b	ENSGT01090000260030.b	ENSGT00940000178523	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT01010000222336.b.a.b.a.l	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT00980000199477	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b.ec	ENSGT00510000050227	ENSGT01060000248528.b.we.b
Eastern happy	MODERN SPECIES	8	gata3 (ENSACLG00000013948)	ENSACLG00000013942	ENSACLG00000013940	ENSACLG00000013872	ENSACLG00000013805	celf2 (ENSACLG00000013768)	usp6nl (ENSACLG00000013656)	ENSACLG00000013651	plxnb2a.1 (ENSACLG00000013581)	ENSACLG00000013574	ENSACLG00000013571	ENSACLG00000013561	ENSACLG00000013231	ENSACLG00000013226	abcc9 (ENSACLG00000013149) #21	kcnj8 (ENSACLG00000013111) #22	ENSACLG00000013105	ECHDC3 (ENSACLG00000013007)	ENSACLG00000012999	AVPR1A (ENSACLG00000012998)	srgap1b (ENSACLG00000012950)	kics2 (ENSACLG00000012925)	TMEM19 (ENSACLG00000012863)	rab3ip (ENSACLG00000012765)	ENSACLG00000012756	UPF2 (ENSACLG00000012696)	slc35e3 (ENSACLG00000012666)	nup107 (ENSACLG00000012617)	mdm2 (ENSACLG00000012579)	ENSACLG00000012530	ENSACLG00000012505
Zebra mbuna	MODERN SPECIES	1099	tmem110l (ENSMZEG00005021724)	ITIH5 (ENSMZEG00005021717)	itih2 (ENSMZEG00005021711)	kin (ENSMZEG00005021704)	atp5f1c (ENSMZEG00005021697)	gata3 (ENSMZEG00005021692)	ENSMZEG00005021690	ENSMZEG00005021680	celf2 (ENSMZEG00005021669)	ENSMZEG00005021661	usp6nl (ENSMZEG00005021658)	plxnb2a.1 (ENSMZEG00005021653)	ENSMZEG00005021639	ENSMZEG00005021636	abcc9 (ENSMZEG00005021629) #21	kcnj8 (ENSMZEG00005021624) #22	ENSMZEG00005021623	ECHDC3 (ENSMZEG00005021622)	ENSMZEG00005021621	AVPR1A (ENSMZEG00005021618)	srgap1b (ENSMZEG00005021614)	kics2 (ENSMZEG00005021612)	TMEM19 (ENSMZEG00005021609)	rab3ip (ENSMZEG00005021604)	ENSMZEG00005021602	UPF2 (ENSMZEG00005021595)	slc35e3 (ENSMZEG00005021588)	nup107 (ENSMZEG00005021563)	mdm2 (ENSMZEG00005021557)	ENSMZEG00005021554	ENSMZEG00005021551
P. nyererei	MODERN SPECIES	585												plxnb2a.1 (ENSPNYG00000016459)	ENSPNYG00000016609	ENSPNYG00000016697	abcc9 (ENSPNYG00000016754) #21	kcnj8 (ENSPNYG00000016839) #22	ENSPNYG00000016857	ECHDC3 (ENSPNYG00000016868)	ENSPNYG00000016886	AVPR1A (ENSPNYG00000016901)	srgap1b (ENSPNYG00000016917)	kics2 (ENSPNYG00000016975)	TMEM19 (ENSPNYG00000016997)	rab3ip (ENSPNYG00000017032)	ENSPNYG00000017066	UPF2 (ENSPNYG00000017096)	slc35e3 (ENSPNYG00000017174)	nup107 (ENSPNYG00000017227)	mdm2 (ENSPNYG00000017315)
Burton s mouthbrooder	MODERN SPECIES	309	SFMBT2 (ENSHBUG00000005308)	tmem110l (ENSHBUG00000005270)	ITIH5 (ENSHBUG00000005241)	itih2 (ENSHBUG00000005228)	kin (ENSHBUG00000005203)	atp5f1c (ENSHBUG00000005140)	gata3 (ENSHBUG00000005096)	celf2 (ENSHBUG00000005058)	usp6nl (ENSHBUG00000004915)	plxnb2a.1 (ENSHBUG00000004857)	ENSHBUG00000004783	ENSHBUG00000004771	ENSHBUG00000004752	ENSHBUG00000004698	abcc9 (ENSHBUG00000004659) #21	kcnj8 (ENSHBUG00000004559) #22	ENSHBUG00000004536	ECHDC3 (ENSHBUG00000004520)	ENSHBUG00000004499	AVPR1A (ENSHBUG00000004487)	srgap1b (ENSHBUG00000004470)	kics2 (ENSHBUG00000004380)	TMEM19 (ENSHBUG00000004362)	rab3ip (ENSHBUG00000004329)	ENSHBUG00000004270	UPF2 (ENSHBUG00000004249)	slc35e3 (ENSHBUG00000004159)	nup107 (ENSHBUG00000004127)	mdm2 (ENSHBUG00000004102)	ENSHBUG00000004085	ENSHBUG00000004058
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	291	SFMBT2 (ENSNBRG00000012576)	tmem110l (ENSNBRG00000012624)	ITIH5 (ENSNBRG00000012643)	itih2 (ENSNBRG00000012689)	kin (ENSNBRG00000012732)	atp5f1c (ENSNBRG00000012754)	gata3 (ENSNBRG00000012777)	ENSNBRG00000012802	celf2 (ENSNBRG00000012818)	ENSNBRG00000012867	usp6nl (ENSNBRG00000012887)	plxnb2a.1 (ENSNBRG00000012921)	ENSNBRG00000013065	ENSNBRG00000013097	abcc9 (ENSNBRG00000013120) #21	kcnj8 (ENSNBRG00000013212) #22	ECHDC3 (ENSNBRG00000013230)	acot15 (ENSNBRG00000013263)	AVPR1A (ENSNBRG00000013319)	srgap1b (ENSNBRG00000013523)	kics2 (ENSNBRG00000013555)	TMEM19 (ENSNBRG00000013564)	rab3ip (ENSNBRG00000013590)	ENSNBRG00000013615	UPF2 (ENSNBRG00000013629)	slc35e3 (ENSNBRG00000013679)	nup107 (ENSNBRG00000013724)	mdm2 (ENSNBRG00000013973)	ENSNBRG00000014005	ENSNBRG00000014015	ENSNBRG00000014026
Lyretail cichlid	MODERN SPECIES	305																ENSNBRG00000007443 #22	MOB2 (ENSNBRG00000007415)	dusp8a (ENSNBRG00000007404)	PTPN5 (ENSNBRG00000007374)	ENSNBRG00000007349	OSBPL5 (ENSNBRG00000007302)	phlda2 (ENSNBRG00000007287)	nap1l4a (ENSNBRG00000007252)	th (ENSNBRG00000007209)	igf2b (ENSNBRG00000007203)	mrpl23 (ENSNBRG00000007183)	ENSNBRG00000007151	CPT1A (ENSNBRG00000007101)	ENSNBRG00000007083	ENSNBRG00000007079	spty2d1 (ENSNBRG00000007070)
Atherinomorphae	ANCESTRAL SPECIES	21	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Oryzias	ANCESTRAL SPECIES	20	ENSGT00940000156003.l.b	ENSGT00390000002796	ENSGT00940000157659	ENSGT00940000158094	ENSGT00910000145367	ENSGT00940000157502	ENSGT00440000039984.b	ENSGT00940000158420	ENSGT00940000159226	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT00730000111164	ENSGT00530000064318	ENSGT01010000222533	ENSGT00940000157998	ENSGT00390000017998	ENSGT00390000009583
Oryzias_b	ANCESTRAL SPECIES	19	ENSGT00940000156003.l.b	ENSGT00390000002796	ENSGT00940000157659	ENSGT00940000158094	ENSGT00910000145367	ENSGT00940000157502	ENSGT00440000039984.b	ENSGT00940000158420	ENSGT00940000159226	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT00730000111164	ENSGT00530000064318	ENSGT01010000222533	ENSGT00940000157998	ENSGT00390000017998	ENSGT00390000009583
Javanese ricefish	MODERN SPECIES	15	creb3l2 (ENSOJAG00000022612)	ENSOJAG00000021975	ENSOJAG00000021962	RASSF3 (ENSOJAG00000021951)	zgc:194209 (ENSOJAG00000021938)	gnsa (ENSOJAG00000021645)	TBC1D30 (ENSOJAG00000021626)	prkcq (ENSOJAG00000021262)	ENSOJAG00000021224	SFMBT2 (ENSOJAG00000021102)	tmem110l (ENSOJAG00000021076)	ITIH5 (ENSOJAG00000021070)	plxnb2a.1 (ENSOJAG00000020869)	ENSOJAG00000020852	ENSOJAG00000020846	kcnj8 (ENSOJAG00000020546) #22	ECHDC3 (ENSOJAG00000020533)	usp6nl (ENSOJAG00000020493)	celf2 (ENSOJAG00000019695)	ENSOJAG00000019587	gata3 (ENSOJAG00000019564)	atp5f1c (ENSOJAG00000019545)	kin (ENSOJAG00000019515)	itih2 (ENSOJAG00000019321)	ENSOJAG00000019292	nup107 (ENSOJAG00000018602)	slc35e3 (ENSOJAG00000018494)	UPF2 (ENSOJAG00000018451)	ENSOJAG00000018427	rab3ip (ENSOJAG00000018180)	TMEM19 (ENSOJAG00000018145)
Indian medaka	MODERN SPECIES	2	DGKI (ENSOMEG00000023790)	ENSOMEG00000023771	RASSF3 (ENSOMEG00000023764)	zgc:194209 (ENSOMEG00000023753)	gnsa (ENSOMEG00000023748)	TBC1D30 (ENSOMEG00000000637)	prkcq (ENSOMEG00000023735)	ENSOMEG00000023729	SFMBT2 (ENSOMEG00000023721)	tmem110l (ENSOMEG00000023709)	ITIH5 (ENSOMEG00000023705)	ENSOMEG00000023695	ENSOMEG00000023692	ENSOMEG00000023687	abcc9 (ENSOMEG00000023674) #21	kcnj8 (ENSOMEG00000023632) #22	ECHDC3 (ENSOMEG00000023622)	usp6nl (ENSOMEG00000023616)	celf2 (ENSOMEG00000023599)	ENSOMEG00000023554	gata3 (ENSOMEG00000023544)	ENSOMEG00000023531	atp5f1c (ENSOMEG00000023526)	kin (ENSOMEG00000023512)	itih2 (ENSOMEG00000023499)	mdm2 (ENSOMEG00000023474)	nup107 (ENSOMEG00000023461)	slc35e3 (ENSOMEG00000023442)	UPF2 (ENSOMEG00000023420)	ENSOMEG00000023391	rab3ip (ENSOMEG00000023380)
Oryzias_a	ANCESTRAL SPECIES	15	ENSGT00940000156003.l.b	ENSGT00390000002796	ENSGT00940000157659	ENSGT00940000158094	ENSGT00910000145367	ENSGT00940000157502	ENSGT00440000039984.b	ENSGT00940000158420	ENSGT00940000159226	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT00730000111164	ENSGT00530000064318	ENSGT01010000222533	ENSGT00940000157998	ENSGT00390000017998	ENSGT00390000009583
Chinese medaka	MODERN SPECIES	470											SFMBT2 (ENSOSIG00000016446)	tmem110l (ENSOSIG00000016448)	ITIH5 (ENSOSIG00000016457)	ENSOSIG00000016808	abcc9 (ENSOSIG00000016856) #21	kcnj8 (ENSOSIG00000017954) #22	ECHDC3 (ENSOSIG00000017958)	usp6nl (ENSOSIG00000017984)	celf2 (ENSOSIG00000018124)	gata3 (ENSOSIG00000018681)	atp5f1c (ENSOSIG00000018703)	kin (ENSOSIG00000018709)	itih2 (ENSOSIG00000018718)	mdm2 (ENSOSIG00000018726)	nup107 (ENSOSIG00000018730)	slc35e3 (ENSOSIG00000018826)	UPF2 (ENSOSIG00000018828)	ENSOSIG00000018832	rab3ip (ENSOSIG00000018850)	TMEM19 (ENSOSIG00000019118)	kics2 (ENSOSIG00000019120)
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	MODERN SPECIES	15	ENSORLG00000022537	ENSORLG00000023711	ENSORLG00000016795	RASSF3 (ENSORLG00000022235)	zgc:194209 (ENSORLG00000016812)	gnsa (ENSORLG00000016835)	TBC1D30 (ENSORLG00000016842)	prkcq (ENSORLG00000016894)	SFMBT2 (ENSORLG00000016910)	tmem110l (ENSORLG00000016913)	ITIH5 (ENSORLG00000016940)	ENSORLG00000028191	ENSORLG00000017004	ENSORLG00000024270	abcc9 (ENSORLG00000017071) #21	kcnj8 (ENSORLG00000017094) #22	ECHDC3 (ENSORLG00000017099)	usp6nl (ENSORLG00000017104)	celf2 (ENSORLG00000017111)	gata3 (ENSORLG00000017122)	atp5f1c (ENSORLG00000017134)	kin (ENSORLG00000017143)	itih2 (ENSORLG00000017154)	ENSORLG00000029073	mdm2 (ENSORLG00000017163)	nup107 (ENSORLG00000017179)	slc35e3 (ENSORLG00000017184)	UPF2 (ENSORLG00000017189)	ENSORLG00000017191	rab3ip (ENSORLG00000017196)	TMEM19 (ENSORLG00000017212)
Japanese Medaka HdrR	MODERN SPECIES	20	WASHC4 (ENSORLG00000016434)	cnot2 (ENSORLG00000016454)	ENSORLG00000029076	lrrc10 (ENSORLG00000016459)	bscl2 (ENSORLG00000016461)	fnbp4 (ENSORLG00000016483)	ENSORLG00000016495	tmem17 (ENSORLG00000016503)	SLC15A5 (ENSORLG00000016508)	ccdc34 (ENSORLG00000022605)	RAB19 (ENSORLG00000016519)	hdhd5 (ENSORLG00000016523)	ccdc77 (ENSORLG00000027582)	ush1c (ENSORLG00000016541)	abcc8 (ENSORLG00000016552)	ENSORLG00000028767 #22	mob2a (ENSORLG00000025111)	dusp8a (ENSORLG00000023597)	ENSORLG00000021785	ENSORLG00000027067	ENSORLG00000029761	ENSORLG00000028466	ENSORLG00000026283	ENSORLG00000025658	ENSORLG00000022493	ENSORLG00000029831	ENSORLG00000027452	ENSORLG00000025467	ENSORLG00000023418	OSBPL5 (ENSORLG00000015578)	ENSORLG00000026646
Cyprinodontiformes	ANCESTRAL SPECIES	19	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000154308.A.b.b.b.b.a.a	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247.n	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Aplocheiloidei	ANCESTRAL SPECIES	14	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000154308.A.b.b.b.b.a.a	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247.n	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Turquoise killifish	MODERN SPECIES	1610	ENSNFUG00015023903	AVPR1A (ENSNFUG00015023914)	ENSNFUG00015023927	SRGAP2B (ENSNFUG00015023962)	C4H12ORF66 (ENSNFUG00015024142)	TMEM19 (ENSNFUG00015024146)	RAB3IP (ENSNFUG00015024155)	ENSNFUG00015024236	UPF2 (ENSNFUG00015024237)	SLC35E3 (ENSNFUG00015024240)	NUP107 (ENSNFUG00015024242)	MDM2 (ENSNFUG00015024280)	ENSNFUG00015024312	ENSNFUG00015024314	abcc9 (ENSNFUG00015024329) #21	ENSNFUG00015024505 #22	ECHDC3 (ENSNFUG00015024507)	ENSNFUG00015024511	celf2 (ENSNFUG00015024532)	ENSNFUG00015024747	HS3ST3L (ENSNFUG00015024750)	Nfu_g_1_011725 (ENSNFUG00015024751)	Nfu_g_1_011611 (ENSNFUG00015024754)	ENSNFUG00015024776	ENSNFUG00015004665	GATA3 (ENSNFUG00015004669)	ENSNFUG00015004675	ATP5C1 (ENSNFUG00015004689)	kin (ENSNFUG00015004767)	itih2 (ENSNFUG00015005010)	ITIH5 (ENSNFUG00015005085)
Cyprinodontoidei	ANCESTRAL SPECIES	20	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000154308.A.b.b.b.b.a.a	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247.n	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945.e	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000156375	ENSGT00940000163529
Poeciliinae	ANCESTRAL SPECIES	41	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000154308.A.b.b.b.b.a.a	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000163149.a.b.d	ENSGT00940000159247.n	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945.e	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000156375
Poecilia	ANCESTRAL SPECIES	75												ENSGT01100000263567.a.a.d.b.l	ENSGT00950000183089.c.a.k.b.b.k.a.a.b	ENSGT00940000154308.A.b.b.b.b.a.a	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000163149.a.b.d	ENSGT00940000159247.n	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945.e	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000156375
NAME_6	ANCESTRAL SPECIES	469															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715
Amazon molly	MODERN SPECIES	621	TMEM19 (ENSPFOG00000017010)	rab3ip (ENSPFOG00000017048)	ENSPFOG00000017111	UPF2 (ENSPFOG00000017118)	slc35e3 (ENSPFOG00000017180)	nup107 (ENSPFOG00000017201)	mdm2 (ENSPFOG00000017322)	plxnb2a.1 (ENSPFOG00000017368)	ENSPFOG00000021675	ENSPFOG00000023258	ENSPFOG00000017621	ENSPFOG00000017623	ENSPFOG00000022652	ENSPFOG00000017626	abcc9 (ENSPFOG00000017642) #21	kcnj8 (ENSPFOG00000017849) #22	ENSPFOG00000020877	ECHDC3 (ENSPFOG00000017859)	usp6nl (ENSPFOG00000017875)
Sailfin molly	MODERN SPECIES	1816															abcc9 (ENSPLAG00000014498) #21	kcnj8 (ENSPLAG00000014411) #22	ENSPLAG00000014354	ECHDC3 (ENSPLAG00000014228)	usp6nl (ENSPLAG00000014218)
Guppy	MODERN SPECIES	54										ENSPREG00000007644	ENSPREG00000007639	ENSPREG00000007622	ENSPREG00000007613	ENSPREG00000007598	abcc9 (ENSPREG00000007527) #21	kcnj8 (ENSPREG00000007500) #22	ECHDC3 (ENSPREG00000007487)
Platyfish	MODERN SPECIES	8	mdm2 (ENSXMAG00000017276)	ENSXMAG00000017300	ENSXMAG00000026142	ENSXMAG00000025482	ENSXMAG00000021142	ENSXMAG00000028754	ENSXMAG00000022479	ENSXMAG00000028843	ENSXMAG00000027977	ENSXMAG00000029272	ENSXMAG00000026562	ENSXMAG00000021409	ENSXMAG00000010363	ENSXMAG00000023094	abcc9 (ENSXMAG00000017404) #21	kcnj8 (ENSXMAG00000017494) #22	ECHDC3 (ENSXMAG00000017527)	usp6nl (ENSXMAG00000017536)	ENSXMAG00000006462	lsm8 (ENSXMAG00000025919)	grip1 (ENSXMAG00000006468)	cand1 (ENSXMAG00000006499)	ENSXMAG00000006539	ENSXMAG00000006542	ENSXMAG00000006543	ENSXMAG00000026633	ifng1 (ENSXMAG00000023329)	dyrk2 (ENSXMAG00000006546)	ENSXMAG00000006556	ENSXMAG00000023120	ENSXMAG00000024337
NAME_4	ANCESTRAL SPECIES	401															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A
Mummichog	MODERN SPECIES	2373	FLNC (ENSFHEG00000011850)	socs2 (ENSFHEG00000011710)	cradd (ENSFHEG00000011703)	PTPRO (ENSFHEG00000011691)	C11orf98 (ENSFHEG00000011600)	ENSFHEG00000011576	ENSFHEG00000011562	lrp6 (ENSFHEG00000011540)	tbk1 (ENSFHEG00000011458)	gpr19 (ENSFHEG00000011211)	crebl2 (ENSFHEG00000011204)	dusp16 (ENSFHEG00000011183)	eps8a (ENSFHEG00000011150)	ENSFHEG00000011028	abcc9 (ENSFHEG00000010958) #21	kcnj8 (ENSFHEG00000010619) #22	ENSFHEG00000010609	ECHDC3 (ENSFHEG00000010605)	usp6nl (ENSFHEG00000010575)	celf2 (ENSFHEG00000010537)
Sheepshead minnow	MODERN SPECIES	487													PTPRO (ENSCVAG00000004673)	ENSCVAG00000004508	abcc9 (ENSCVAG00000004500) #21	ENSCVAG00000004425 #22	ECHDC3 (ENSCVAG00000004419)	usp6nl (ENSCVAG00000004407)	celf2 (ENSCVAG00000004383)
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420
Anabantaria	ANCESTRAL SPECIES	21	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Anabantoidei	ANCESTRAL SPECIES	21	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000020647	RASSF3 (ENSBSLG00000020651)	gnsa (ENSBSLG00000021265)	TBC1D30 (ENSBSLG00000021783)	prkcq (ENSBSLG00000021973)	SFMBT2 (ENSBSLG00000022028)	tmem110l (ENSBSLG00000022179)	ITIH5 (ENSBSLG00000022187)	itih2 (ENSBSLG00000022197)	kin (ENSBSLG00000022253)	atp5f1c (ENSBSLG00000022302)	gata3 (ENSBSLG00000022349)	celf2 (ENSBSLG00000022453)	usp6nl (ENSBSLG00000022892)	ECHDC3 (ENSBSLG00000023268)	kcnj8 (ENSBSLG00000023462) #22	plxnb2a.1 (ENSBSLG00000023535)	mdm2 (ENSBSLG00000023797)	nup107 (ENSBSLG00000023808)	slc35e3 (ENSBSLG00000023891)	UPF2 (ENSBSLG00000023925)	ENSBSLG00000023972	rab3ip (ENSBSLG00000023978)	TMEM19 (ENSBSLG00000024016)	kics2 (ENSBSLG00000024024)	srgap1b (ENSBSLG00000024083)	AVPR1A (ENSBSLG00000024678)	ENSBSLG00000024679	ENSBSLG00000024686	ENSBSLG00000024703	ENSBSLG00000024707
Climbing perch	MODERN SPECIES	14	ENSATEG00000021330	ENSATEG00000021343	ENSATEG00000021364	ENSATEG00000021393	ENSATEG00000021579	ENSATEG00000021603	TMEM19 (ENSATEG00000025494)	ENSATEG00000021626	ENSATEG00000021663	ENSATEG00000021677	ENSATEG00000021692	ENSATEG00000021708	ENSATEG00000021756	plxnb2a.1 (ENSATEG00000021767)	ENSATEG00000021820 #21	kcnj8 (ENSATEG00000021871) #22	ENSATEG00000021889	usp6nl (ENSATEG00000021901)	celf2 (ENSATEG00000021942)	gata3 (ENSATEG00000022001)	atp5f1c (ENSATEG00000022006)	kin (ENSATEG00000022023)	itih2 (ENSATEG00000022044)	ITIH5 (ENSATEG00000022065)	tmem110l (ENSATEG00000022074)	SFMBT2 (ENSATEG00000022088)	prkcq (ENSATEG00000022118)	TBC1D30 (ENSATEG00000022181)	gnsa (ENSATEG00000022252)	zgc:194209 (ENSATEG00000022279)	RASSF3 (ENSATEG00000025571)
Zig-zag eel	MODERN SPECIES	15	ENSMAMG00000018549	ENSMAMG00000018515	ENSMAMG00000018490	ENSMAMG00000018441	ENSMAMG00000027641	ENSMAMG00000018406	ENSMAMG00000018384	ENSMAMG00000018367	ENSMAMG00000018350	ENSMAMG00000018276	ENSMAMG00000018226	ENSMAMG00000018168	ENSMAMG00000018156	plxnb2a.1 (ENSMAMG00000018067)	ENSMAMG00000017986 #21	kcnj8 (ENSMAMG00000017974) #22	ENSMAMG00000017969	usp6nl (ENSMAMG00000017943)	celf2 (ENSMAMG00000017876)	gata3 (ENSMAMG00000017856)	atp5f1c (ENSMAMG00000017829)	kin (ENSMAMG00000017791)	itih2 (ENSMAMG00000017776)	ITIH5 (ENSMAMG00000017761)	tmem110l (ENSMAMG00000017744)	SFMBT2 (ENSMAMG00000017712)	prkcq (ENSMAMG00000017681)	TBC1D30 (ENSMAMG00000017674)	gnsa (ENSMAMG00000017645)	zgc:194209 (ENSMAMG00000017617)	RASSF3 (ENSMAMG00000026100)
Carangaria	ANCESTRAL SPECIES	22	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420
Carangaria_A	ANCESTRAL SPECIES	21	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00970000193381.a.b.a.a.b.b.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420
Seriola	ANCESTRAL SPECIES	9	ENSGT00530000063817.b.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000154709.a.a	ENSGT00940000158899	ENSGT01050000244951.a.b.a.b.b.c	ENSGT00940000153962.b	ENSGT00940000155394.i.a	ENSGT00390000000406	ENSGT00940000156120.a	ENSGT00390000013067.l.l	ENSGT00950000182959.a.b.b.a	ENSGT00950000182959.a.a	ENSGT00940000153222.a.a	ENSGT00940000157479	ENSGT01050000244900.a.a.a.a.b.bb	ENSGT00940000166093	ENSGT00940000158804
Greater amberjack	MODERN SPECIES	60	MTERF2 (ENSSDUG00000016802)	ENSSDUG00000016804	acot14 (ENSSDUG00000016832)	AVPR1A (ENSSDUG00000016871)	srgap1b (ENSSDUG00000017062)	kics2 (ENSSDUG00000017120)	TMEM19 (ENSSDUG00000017135)	rab3ip (ENSSDUG00000017171)	ENSSDUG00000017218	UPF2 (ENSSDUG00000017244)	slc35e3 (ENSSDUG00000017364)	nup107 (ENSSDUG00000017402)	mdm2 (ENSSDUG00000017495)	plxnb2a.1 (ENSSDUG00000017517)	abcc9 (ENSSDUG00000017622) #21	kcnj8 (ENSSDUG00000017965) #22	syt10 (ENSSDUG00000018002)	ENSSDUG00000018031	cyb5r3 (ENSSDUG00000018106)	syt1a (ENSSDUG00000018131)	pawr (ENSSDUG00000018156)	ppp1r12a (ENSSDUG00000018184)	rps16 (ENSSDUG00000018274)	myf6 (ENSSDUG00000018309)	myf5 (ENSSDUG00000018287)	lin7a (ENSSDUG00000018320)	ACSS3 (ENSSDUG00000018359)	ppfia2 (ENSSDUG00000018476)	ENSSDUG00000018657	foxm1 (ENSSDUG00000018732)	rhno1 (ENSSDUG00000018757)
Yellowtail amberjack	MODERN SPECIES	2835						kics2 (ENSSLDG00000017050)	TMEM19 (ENSSLDG00000017011)	rab3ip (ENSSLDG00000016943)	ENSSLDG00000016908	UPF2 (ENSSLDG00000016866)	slc35e3 (ENSSLDG00000016840)	nup107 (ENSSLDG00000016797)	mdm2 (ENSSLDG00000016771)	plxnb2a.1 (ENSSLDG00000016700)	abcc9 (ENSSLDG00000016593) #21	kcnj8 (ENSSLDG00000016562) #22	tnnt2c (ENSSLDG00000016544)	syt10 (ENSSLDG00000016524)	ENSSLDG00000016502
Barramundi perch	MODERN SPECIES	154														plxnb2a.1 (ENSLCAG00010008486)	abcc9 (ENSLCAG00010008635) #21	kcnj8 (ENSLCAG00010008696) #22	ENSLCAG00010008699	ECHDC3 (ENSLCAG00010008701)	usp6nl (ENSLCAG00010008710)	celf2 (ENSLCAG00010008876)	ENSLCAG00010009366	gata3 (ENSLCAG00010009371)	atp5f1c (ENSLCAG00010009386)	kin (ENSLCAG00010009423)	itih2 (ENSLCAG00010009548)	ITIH5 (ENSLCAG00010009906)	tmem110l (ENSLCAG00010009910)	SFMBT2 (ENSLCAG00010009921)	prkcq (ENSLCAG00010009934)	TBC1D30 (ENSLCAG00010009961)	gnsa (ENSLCAG00010009984)
Pleuronectoidei	ANCESTRAL SPECIES	16	ENSGT00940000155083.b.a.b	ENSGT00390000018424	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Turbot	MODERN SPECIES	11	ENSSMAG00000024403	ENSSMAG00000010132	ENSSMAG00000010163	ENSSMAG00000022874	ENSSMAG00000010229	ENSSMAG00000010317	ENSSMAG00000010335	ENSSMAG00000007580	ENSSMAG00000007611	ENSSMAG00000007637	ENSSMAG00000007894	ENSSMAG00000007926	ENSSMAG00000008011	plxnb2a.1 (ENSSMAG00000008066)	ENSSMAG00000008733 #21	kcnj8 (ENSSMAG00000008819) #22	ENSSMAG00000008832	usp6nl (ENSSMAG00000008867)	celf2 (ENSSMAG00000008925)	gata3 (ENSSMAG00000006639)	ENSSMAG00000026319	atp5f1c (ENSSMAG00000006630)	kin (ENSSMAG00000006582)	itih2 (ENSSMAG00000006504)	ITIH5 (ENSSMAG00000006453)	tmem110l (ENSSMAG00000006411)	SFMBT2 (ENSSMAG00000006339)	prkcq (ENSSMAG00000006284)	TBC1D30 (ENSSMAG00000006172)	gnsa (ENSSMAG00000006110)	zgc:194209 (ENSSMAG00000006080)
Tongue sole	MODERN SPECIES	18	ENSCSEG00000003630	ovch1 (ENSCSEG00000003609)	ENSCSEG00000003598	svopl (ENSCSEG00000003571)	ENSCSEG00000003562	ENSCSEG00000003555	ENSCSEG00000003549	rab3ip (ENSCSEG00000003533)	ENSCSEG00000003529	UPF2 (ENSCSEG00000003520)	ENSCSEG00000003517	nup107 (ENSCSEG00000003449)	mdm2 (ENSCSEG00000003433)	plxnb2a.1 (ENSCSEG00000003408)	abcc9 (ENSCSEG00000003388) #21	kcnj8 (ENSCSEG00000003368) #22	ECHDC3 (ENSCSEG00000003360)	usp6nl (ENSCSEG00000003353)	celf2 (ENSCSEG00000003342)	ipo8 (ENSCSEG00000003320)	ENSCSEG00000003316	TMTC1 (ENSCSEG00000003289)	nfybb (ENSCSEG00000003273)	ENSCSEG00000003268	mkln1 (ENSCSEG00000003253)	plekha5 (ENSCSEG00000003239)	aebp2 (ENSCSEG00000003233)	ndufa5 (ENSCSEG00000003227)	sult4a1 (ENSCSEG00000003217)	MPPED1 (ENSCSEG00000003212)	scube1 (ENSCSEG00000003187)
Eupercaria	ANCESTRAL SPECIES	21	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00390000012080	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Tetraodontidae	ANCESTRAL SPECIES	17	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247.j	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00940000157502	ENSGT00940000158094
Fugu	MODERN SPECIES	9	cpm (ENSTRUG00000004809)	dmtf1 (ENSTRUG00000005215)	cwf19l1 (ENSTRUG00000005661)	AVPR1A (ENSTRUG00000006025)	srgap1b (ENSTRUG00000006228)	kics2 (ENSTRUG00000023921)	TMEM19 (ENSTRUG00000006898)	rab3ip (ENSTRUG00000007115)	ENSTRUG00000032028	UPF2 (ENSTRUG00000007519)	slc35e3 (ENSTRUG00000007693)	nup107 (ENSTRUG00000007803)	mdm2 (ENSTRUG00000008338)	plxnb2a.1 (ENSTRUG00000008707)	abcc9 (ENSTRUG00000009219) #21	kcnj8 (ENSTRUG00000009953) #22	usp6nl (ENSTRUG00000025157)	celf2 (ENSTRUG00000010147)	gata3 (ENSTRUG00000010450)	atp5f1c (ENSTRUG00000010586)	kin (ENSTRUG00000010720)	itih2 (ENSTRUG00000010807)	ITIH5 (ENSTRUG00000011222)	tmem110l (ENSTRUG00000011728)	SFMBT2 (ENSTRUG00000011786)	prkcq (ENSTRUG00000011933)	TBC1D30 (ENSTRUG00000012364)	gnsa (ENSTRUG00000012451)	RASSF3 (ENSTRUG00000012661)	creb3l2 (ENSTRUG00000013114)	ssbp1 (ENSTRUG00000013183)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000010326	pum3 (ENSTNIG00000010325)	KCNV2 (ENSTNIG00000010324)	cables1 (ENSTNIG00000010323)	vldlr (ENSTNIG00000010322)	ENSTNIG00000007214	spp1 (ENSTNIG00000000575)	ENSTNIG00000007213	lrsam1 (ENSTNIG00000007212)	ndor1 (ENSTNIG00000007211)	ntmt1 (ENSTNIG00000007210)	ier5l (ENSTNIG00000007209)	ptpa (ENSTNIG00000007208)	crata (ENSTNIG00000007207)	abcc9 (ENSTNIG00000006479) #21	kcnj8 (ENSTNIG00000006480) #22	ECHDC3 (ENSTNIG00000001958)	ENSTNIG00000006482	ENSTNIG00000001329	ENSTNIG00000006484	ENSTNIG00000006485	cand1 (ENSTNIG00000006486)	rab21 (ENSTNIG00000002501)	ENSTNIG00000002500	PTPRR (ENSTNIG00000002499)	ptprb (ENSTNIG00000002498)	KCNMB4 (ENSTNIG00000002497)	CNOT2 (ENSTNIG00000002496)	ENSTNIG00000002495	ENSTNIG00000002494	KCNA5 (ENSTNIG00000000276)
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00390000012080	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Ballan wrasse	MODERN SPECIES	1480															ENSLBEG00000010652	kcnj8 (ENSLBEG00000010673) #22	ECHDC3 (ENSLBEG00000010693)	usp6nl (ENSLBEG00000010731)
Eupecaria_B	ANCESTRAL SPECIES	21	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00390000012080	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Perciformes	ANCESTRAL SPECIES	18	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Cottioidei	ANCESTRAL SPECIES	19								ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00390000012080	ENSGT00530000063539.b	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502	ENSGT00910000145367
Stickleback	MODERN SPECIES	83				ENSGACG00000001067	ENSGACG00000001068	ENSGACG00000001071	rab3ip (ENSGACG00000001074)	ENSGACG00000001077	ENSGACG00000001079	UPF2 (ENSGACG00000001080)	slc35e3 (ENSGACG00000001086)	nup107 (ENSGACG00000001088)	mdm2 (ENSGACG00000001095)	PLXNB2 (ENSGACG00000001099)	abcc9 (ENSGACG00000001102) #21	kcnj8 (ENSGACG00000001115) #22	ECHDC3 (ENSGACG00000001116)	usp6nl (ENSGACG00000001122)	ENSGACG00000001126
Lumpfish	MODERN SPECIES	15	kics2 (ENSCLMG00005010708)	srgap1b (ENSCLMG00005010711)	AVPR1A (ENSCLMG00005010772)	cwf19l1 (ENSCLMG00005010775)	dmtf1 (ENSCLMG00005011373)	cpm (ENSCLMG00005011376)	ENSCLMG00005011377	TRHDE (ENSCLMG00005011378)	ENSCLMG00005011380	UPF2 (ENSCLMG00005011383)	slc35e3 (ENSCLMG00005011425)	plxnb2a.1 (ENSCLMG00005011439)	mdm2 (ENSCLMG00005011698)	nup107 (ENSCLMG00005011707)	abcc9 (ENSCLMG00005012703) #21	kcnj8 (ENSCLMG00005013661) #22	ECHDC3 (ENSCLMG00005013662)	usp6nl (ENSCLMG00005013664)	ENSCLMG00005014238	celf2 (ENSCLMG00005014242)	ENSCLMG00005014247	ENSCLMG00005014248	ENSCLMG00005014250	SFMBT2 (ENSCLMG00005014257)	ENSCLMG00005014286	ENSCLMG00005014287	ENSCLMG00005014289	creb3l2 (ENSCLMG00005014294)	ssbp1 (ENSCLMG00005014295)	acot15 (ENSCLMG00005014296)	CD9 (ENSCLMG00005014342)
Perciformes_a	ANCESTRAL SPECIES	19															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000157502
Pike perch	MODERN SPECIES	158															abcc9 (ENSSLUG00000018578) #21	kcnj8 (ENSSLUG00000018526) #22	ECHDC3 (ENSSLUG00000018518)	ENSSLUG00000018514	usp6nl (ENSSLUG00000018170)	celf2 (ENSSLUG00000017887)	gata3 (ENSSLUG00000017863)	atp5f1c (ENSSLUG00000017860)	kin (ENSSLUG00000017854)	itih2 (ENSSLUG00000015967)	ITIH5 (ENSSLUG00000015825)	tmem110l (ENSSLUG00000015813)	SFMBT2 (ENSSLUG00000015720)
Channel bull blenny	MODERN SPECIES	15															abcc9 (ENSCGOG00000008457) #21	kcnj8 (ENSCGOG00000013288) #22	ECHDC3 (ENSCGOG00000013290)	usp6nl (ENSCGOG00000013294)	celf2 (ENSCGOG00000013480)	gata3 (ENSCGOG00000015657)	atp5f1c (ENSCGOG00000015708)	kin (ENSCGOG00000015866)	itih2 (ENSCGOG00000015963)	ITIH5 (ENSCGOG00000016017)	tmem110l (ENSCGOG00000016032)	SFMBT2 (ENSCGOG00000016039)	prkcq (ENSCGOG00000016167)	TBC1D30 (ENSCGOG00000018496)	gnsa (ENSCGOG00000018524)	zgc:194209 (ENSCGOG00000018955)	RASSF3 (ENSCGOG00000018958)
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00940000158580	ENSGT00940000156016	ENSGT00940000156000	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00390000017998	ENSGT00940000157998	ENSGT01010000222533	ENSGT00530000064318	ENSGT00730000111164	ENSGT00530000063539.b	ENSGT00390000012080	ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Gilthead seabream	MODERN SPECIES	5	ENSSAUG00010024245	kics2 (ENSSAUG00010024244)	ENSSAUG00010024241	ENSSAUG00010024238	ENSSAUG00010024235	TMEM19 (ENSSAUG00010024234)	rab3ip (ENSSAUG00010024207)	ENSSAUG00010024205	UPF2 (ENSSAUG00010024201)	slc35e3 (ENSSAUG00010024198)	mdm2 (ENSSAUG00010024196)	nup107 (ENSSAUG00010023670)	plxnb2a.1 (ENSSAUG00010023233)	ENSSAUG00010023218	abcc9 (ENSSAUG00010023046) #21	kcnj8 (ENSSAUG00010023037) #22	ECHDC3 (ENSSAUG00010023036)	usp6nl (ENSSAUG00010022932)	celf2 (ENSSAUG00010022688)	gata3 (ENSSAUG00010022683)	ATP5C1 (ENSSAUG00010022681)	kin (ENSSAUG00010022665)	itih2 (ENSSAUG00010022594)	ITIH5 (ENSSAUG00010022587)	tmem110l (ENSSAUG00010022584)	ENSSAUG00010022513	prkcq (ENSSAUG00010020355)	ENSSAUG00010020309	TBC1D30 (ENSSAUG00010020117)	gnsa (ENSSAUG00010019933)	zgc:194209 (ENSSAUG00010019920)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	22														ENSGT01020000230394.e.a.a.a.a.b	ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.A	ENSGT01000000221329	ENSGT00940000159247	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000153920.a.a	ENSGT00940000158123	ENSGT00940000157638	ENSGT00940000159226	ENSGT00940000158420	ENSGT00440000039984.b
Large yellow croaker	MODERN SPECIES	491	sult4a1 (ENSLCRG00005019741)	pnpla3 (ENSLCRG00005019740)	SNX4 (ENSLCRG00005019469)	ttll12 (ENSLCRG00005019210)	dennd5b (ENSLCRG00005016739)	sinhcaf (ENSLCRG00005016701)	ENSLCRG00005016700	caprin2 (ENSLCRG00005016699)	ipo8 (ENSLCRG00005015809)	ENSLCRG00005015791	TMTC1 (ENSLCRG00005015790)	cwf19l1 (ENSLCRG00005015777)	dmtf1 (ENSLCRG00005015770)	plxnb2a.1 (ENSLCRG00005014791)	abcc9 (ENSLCRG00005014707) #21	kcnj8 (ENSLCRG00005014691) #22	ECHDC3 (ENSLCRG00005014689)	usp6nl (ENSLCRG00005013940)	celf2 (ENSLCRG00005013785)	ENSLCRG00005013779	gata3 (ENSLCRG00005013777)	atp5f1c (ENSLCRG00005013675)	atp5f1c (ENSLCRG00005013666)	kin (ENSLCRG00005013649)	itih2 (ENSLCRG00005013585)	ITIH5 (ENSLCRG00005013580)	tmem110l (ENSLCRG00005013578)	SFMBT2 (ENSLCRG00005013572)	prkcq (ENSLCRG00005013511)	TBC1D30 (ENSLCRG00005013499)	gnsa (ENSLCRG00005011348)
European seabass	MODERN SPECIES	23	kin (ENSDLAG00005025075)	atp5f1c (ENSDLAG00005025077)	gata3 (ENSDLAG00005025080)	celf2 (ENSDLAG00005025094)	ENSDLAG00005025153	usp6nl (ENSDLAG00005025162)	amdhd1 (ENSDLAG00005033135)	SNRPF (ENSDLAG00005002310)	ntn4 (ENSDLAG00005002354)	USP44 (ENSDLAG00005002944)	ENSDLAG00005003114	ENSDLAG00005031000	ENSDLAG00005005286	plxnb2a.1 (ENSDLAG00005005409)	ENSDLAG00005009668 #21	kcnj8 (ENSDLAG00005032834) #22	ENSDLAG00005015170	ENSDLAG00005015186	ENSDLAG00005015250	ENSDLAG00005015264	ENSDLAG00005015897	ENSDLAG00005015759	ENSDLAG00005015784	ENSDLAG00005017574	ENSDLAG00005017590	ENSDLAG00005017694	ENSDLAG00005031031	ENSDLAG00005017733	ENSDLAG00005017723	ENSDLAG00005031535	ENSDLAG00005030796
Cod	MODERN SPECIES	17	ENSGMOG00000037146	ENSGMOG00000024971	ENSGMOG00000030025	ENSGMOG00000004515	ENSGMOG00000023088	ENSGMOG00000033668	ENSGMOG00000013965	ENSGMOG00000013948	ENSGMOG00000036571	ENSGMOG00000013933	ENSGMOG00000034305	ENSGMOG00000036441	ENSGMOG00000028228	plxnb2a.1 (ENSGMOG00000022577)	ENSGMOG00000001244 #21	kcnj8 (ENSGMOG00000001304) #22	ENSGMOG00000001315	ENSGMOG00000032922	ENSGMOG00000036050	msrb3 (ENSGMOG00000031722)	ENSGMOG00000013710	wif1 (ENSGMOG00000022185)	dera (ENSGMOG00000014648)	arhgef39 (ENSGMOG00000033472)	ENSGMOG00000034569	ENSGMOG00000023322	rergla (ENSGMOG00000026331)	ENSGMOG00000036833	ENSGMOG00000001666	mkrn1 (ENSGMOG00000001685)	ENSGMOG00000032371
Protacanthopterygii	ANCESTRAL SPECIES	23															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT01100000263519.A.b.b.a.a.c	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248862	ENSGT00940000158014	ENSGT00940000171263	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a	ENSGT00440000039564.b
Salmoninae	ANCESTRAL SPECIES	94															ENSGT00940000156680.b #21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.q.b #20	ENSGT00940000162287.A.i.a.d.b.b	ENSGT00530000063540.b.d.a	ENSGT00940000153744.B	ENSGT00390000009992.c.b.b	ENSGT00940000171263.a	ENSGT00510000047886.b.j	ENSGT00940000171263.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622.e.b.b	ENSGT00940000153362.a.i	ENSGT00440000039564.b.c	ENSGT00940000165334
Huchen	DUPLICATION
Huchen	MODERN SPECIES	5749															ENSHHUG00000033564 #21	kcnj8 (ENSHHUG00000033556) #22	ENSHHUG00000033543 #20
Huchen	MODERN SPECIES	8180																kcnj8 (ENSHHUG00000002533) #22	ENSHHUG00000002553 #20
Salmoninae_a	ANCESTRAL SPECIES	145											ENSGT00940000157255.d	ENSGT00940000157255.c.b	ENSGT00940000163520.A.a.a.a.a.b.a	ENSGT01020000230394.e.a.a.a.a.b.t.a.a.b	ENSGT00940000156680.a.b ##21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.q.b #20	ENSGT00940000162287.A.i.a.d.b.b	ENSGT00530000063540.b.d.a	ENSGT00940000153744.B	ENSGT00390000009992.c.b.a	ENSGT00940000157713	ENSGT00390000009992.c.a	ENSGT01100000263519.D.d	ENSGT01060000248862	ENSGT00940000158014.d.b.a.a	ENSGT00940000153216.a.a.c.a.o	ENSGT00940000153216.a.a.c.a.p	ENSGT00940000171263.a	ENSGT00510000047886.b.j.b.b	ENSGT00940000154980
Salmo	ANCESTRAL SPECIES	358															ENSGT00940000156680.a.b ##21	ENSGT00990000203615.a.a.b #22	ENSGT00390000004237.q.a.a.c #20	ENSGT01100000263520.a.a.a.b.a.a.a.a
River trout	DUPLICATION
River trout	MODERN SPECIES	34								prl2 (ENSSTUG00000042124)	ENSSTUG00000042157	ENSSTUG00000042198	ENSSTUG00000042318	ENSSTUG00000042339	NUAK1 (ENSSTUG00000042347)	ENSSTUG00000042375	abcc9 (ENSSTUG00000042569) ##21	kcnj8 (ENSSTUG00000044242) #22	CMAS (ENSSTUG00000044262) #20	zgc:113625 (ENSSTUG00000044316)	ENSSTUG00000044328	ENSSTUG00000044337	ENSSTUG00000044349	ENSSTUG00000044360	ENSSTUG00000044366	ENSSTUG00000044371	ENSSTUG00000044378	apex1 (ENSSTUG00000044403)	osgep (ENSSTUG00000044418)	si:ch211-214j24.10 (ENSSTUG00000044474)	ENSSTUG00000044486	ENSSTUG00000044496	nav3 (ENSSTUG00000044541)
River trout	MODERN SPECIES	38													ENSSTUG00000009528	ENSSTUG00000009466	abcc9 (ENSSTUG00000003505) ##21	kcnj8 (ENSSTUG00000003251) #22	CMAS (ENSSTUG00000003185) #20	ENSSTUG00000003175	ENSSTUG00000003164	ENSSTUG00000003157	ENSSTUG00000003115	ENSSTUG00000003103	apex1 (ENSSTUG00000003069)	osgep (ENSSTUG00000002951)	si:ch211-214j24.10 (ENSSTUG00000002937)	ENSSTUG00000002915	ENSSTUG00000002906	ctrb.3 (ENSSTUG00000002899)	ENSSTUG00000002884	nav3 (ENSSTUG00000002461)	ENSSTUG00000002433
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	75										ENSGT00950000183052.a.a.b.a.d	ENSGT00940000154446.a.g.a	ENSGT00940000157255.c.b	ENSGT00940000163520.A.a.a.a.a.b.a	ENSGT01020000230394.e.a.a.a.a.b.t.a.a.b	ENSGT00940000156680.a.b.a ##21	ENSGT00990000203615.a.a.b.m #22	ENSGT00390000004237.q.a.a #20	ENSGT01100000263520.a.a.a.b.a.a.a.a	ENSGT01100000263519.E.b.b.d.a.a	ENSGT00940000162287.A.i.a.d.b.b	ENSGT00530000063540.b.d.a	ENSGT00940000153744.B	ENSGT00390000009992.d	ENSGT01100000263519.D.c.a.a	ENSGT00940000158014.d.b.a.a.b	ENSGT00940000153216.a.a.c.a.o	ENSGT00940000153216.a.a.c.a.p	ENSGT00940000171263.a	ENSGT00510000047886.b.j.b.b.b	ENSGT00510000047886.b.j.b.a	ENSGT00940000171263.b
Oncorhynchus_a	ANCESTRAL SPECIES	183											ENSGT00940000154446.a.g.a	ENSGT00940000157255.c.b	ENSGT00940000163520.A.a.a.a.a.b.a	ENSGT01020000230394.e.a.a.a.a.b.t.a.a.b	ENSGT00940000156680.a.b.a ##21	ENSGT00990000203615.a.a.b.m #22	ENSGT00940000162287.A.i.a.d.b.b	ENSGT00530000063540.b.d.a	ENSGT00940000153744.B	ENSGT00390000009992.d	ENSGT01100000263519.D.c.a.a	ENSGT00940000158014.d.b.a.a.b	ENSGT00940000153216.a.a.c.a.o	ENSGT00940000153216.a.a.c.a.p
Chinook salmon	MODERN SPECIES	1360																kcnj8 (ENSOTSG00005019854) #22	ENSOTSG00005019852
Coho salmon	MODERN SPECIES	37	ENSOKIG00005036607	prickle1b (ENSOKIG00005036564)	pus7l (ENSOKIG00005036550)	twf1b (ENSOKIG00005036462)	ENSOKIG00005035974	prl2 (ENSOKIG00005035892)	ENSOKIG00005035885	ENSOKIG00005035880	ENSOKIG00005035874	ENSOKIG00005035866	NUAK1 (ENSOKIG00005035850)	ENSOKIG00005035817	ENSOKIG00005034790	ENSOKIG00005034745	abcc9 (ENSOKIG00005033970) ##21	kcnj8 (ENSOKIG00005033899) #22	ENSOKIG00005033810 #20	ENSOKIG00005033736	ENSOKIG00005033693	apex1 (ENSOKIG00005033650)	osgep (ENSOKIG00005033540)	si:ch211-214j24.10 (ENSOKIG00005033523)	ENSOKIG00005033504	ctrb.3 (ENSOKIG00005033487)	ENSOKIG00005033445	NAV3 (ENSOKIG00005033208)	ENSOKIG00005033187	ENSOKIG00005033130	ENSOKIG00005033110	e2f7 (ENSOKIG00005033100)	ENSOKIG00005033065
Rainbow trout	MODERN SPECIES	6	PPHLN1 (ENSOMYG00000026959)	prickle1b (ENSOMYG00000056836)	ENSOMYG00000028261	ENSOMYG00000071281	pus7l (ENSOMYG00000011660)	twf1b (ENSOMYG00000011680)	ENSOMYG00000052430	prl2 (ENSOMYG00000054147)	ENSOMYG00000026722	ENSOMYG00000049543	ENSOMYG00000026626	ENSOMYG00000026596	ENSOMYG00000026533	ENSOMYG00000073010	abcc9 (ENSOMYG00000026375) ##21	kcnj8 (ENSOMYG00000055945) #22	ENSOMYG00000053614 #20	ENSOMYG00000026243 #20	ENSOMYG00000067909	ENSOMYG00000047993	ENSOMYG00000068365	ENSOMYG00000068066	ENSOMYG00000010336	ENSOMYG00000010281	ENSOMYG00000011074	ENSOMYG00000063776	apex1 (ENSOMYG00000010104)	ENSOMYG00000010671	si:ch211-214j24.10 (ENSOMYG00000010488)	ENSOMYG00000010475	ENSOMYG00000010470
Oncorhynchus	ANCESTRAL SPECIES	569																ENSGT00990000203615.a.a.b.n #22	ENSGT00390000004237.q.b #20
Rainbow trout	MODERN SPECIES	13	ENSOMYG00000061621	prl2 (ENSOMYG00000058902)	ENSOMYG00000052171	ENSOMYG00000064925	ENSOMYG00000053963	ENSOMYG00000063057	ENSOMYG00000074206	ENSOMYG00000055066	ENSOMYG00000039125	ENSOMYG00000074251	ENSOMYG00000065311	ENSOMYG00000056876	ENSOMYG00000060346	abcc9 (ENSOMYG00000065922) ##21	ENSOMYG00000026470	kcnj8 (ENSOMYG00000074443) #22	cmas (ENSOMYG00000017288) #20	ENSOMYG00000063798	ENSOMYG00000072886	ENSOMYG00000055878	ENSOMYG00000066497	ENSOMYG00000011198	ENSOMYG00000010319	ENSOMYG00000023445	ENSOMYG00000038717	apex1 (ENSOMYG00000010983)	ENSOMYG00000009902	ENSOMYG00000024892	ENSOMYG00000055294	ENSOMYG00000009759	ENSOMYG00000073282
Oncorhynchus_a	ANCESTRAL SPECIES	401																ENSGT00990000203615.a.a.b.n #22	ENSGT00390000004237.q.a.a #20	ENSGT01100000263520.a.a.a.b.a.a.a.a	ENSGT01100000263519.E.b.b.d.a.a
Coho salmon	MODERN SPECIES	639																ENSOKIG00005041342 #22	ENSOKIG00005041372 #20	ENSOKIG00005041406
Northern pike	MODERN SPECIES	22	ENSELUG00000020741	ENSELUG00000033332	ENSELUG00000020829	yaf2 (ENSELUG00000020855)	zcrb1 (ENSELUG00000020877)	pphln1 (ENSELUG00000020926)	prickle1b (ENSELUG00000021012)	twf1b (ENSELUG00000021059)	NELL2 (ENSELUG00000021157)	ENSELUG00000021469	ENSELUG00000034512	prl2 (ENSELUG00000021206)	ENSELUG00000021236	plxnb2a.1 (ENSELUG00000021310)	abcc9 (ENSELUG00000021423) #21	kcnj8 (ENSELUG00000001154) #22	cmasa (ENSELUG00000021496) #20	ENSELUG00000021180	ENSELUG00000021502	ENSELUG00000028336	ENSELUG00000021680	ENSELUG00000030213	ENSELUG00000029254	apex1 (ENSELUG00000021706)	osgep (ENSELUG00000021807)	si:ch211-214j24.10 (ENSELUG00000021832)	ENSELUG00000034654	ENSELUG00000021866	nav3 (ENSELUG00000022160)	ENSELUG00000021903	KCNJ1 (ENSELUG00000000947) ##22
Reedfish	MODERN SPECIES		msrb3 (ENSECRG00000000954)	lemd3 (ENSECRG00000000912)	wif1 (ENSECRG00000000885)	vhll (ENSECRG00000000866)	ENSECRG00000000849	cand1 (ENSECRG00000000821)	ENSECRG00000000800	grip1 (ENSECRG00000000764)	ENSECRG00000000744	HELB (ENSECRG00000000722)	IRAK3 (ENSECRG00000000693)	tmbim4 (ENSECRG00000000669)	ENSECRG00000000660	slco1f2 (ENSECRG00000000637) ##31	abcc9 (ENSECRG00000000506) #21	kcnj8 (ENSECRG00000008332) #22	ldhba (ENSECRG00000008319) #23	ENSECRG00000008298	gys2 (ENSECRG00000008276) #24	SPX (ENSECRG00000008257) #25	golt1bb (ENSECRG00000008243) #26	recql (ENSECRG00000008205) #27	pyroxd1 (ENSECRG00000008181) #29	IAPP (ENSECRG00000008171) #30	cmasa (ENSECRG00000008155) #20	ENSECRG00000008145	ENSECRG00000008112	ENSECRG00000008101	ENSECRG00000008092	ENSECRG00000008058	tmem230b (ENSECRG00000008048)