Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00390000015050	ENSGT00940000157541 #7	ENSGT00530000063686.a.b #8	ENSGT00530000063686.a.a #9	ENSGT00940000157201 #10	ENSGT00390000012204 #11	ENSGT00940000154533.b.d #12	ENSGT00940000154714 #13	ENSGT00950000182837.b.b #14	ENSGT00940000157055 #15	ENSGT00940000155515.a.b.b #16	ENSGT00930000150980.a #18	ENSGT00390000009987 #19	ENSGT00390000010523.c.b #20	ENSGT00940000158904 #21	ENSGT01080000257365.b.a.a.b.a #22	ENSGT00950000183038.a.b.b.b #26	ENSGT00390000001718 #27	ENSGT00940000159241 #28	ENSGT01090000260082.d.a.a.a.b #29	ENSGT00530000063734.a #30	ENSGT00940000158842 #31	ENSGT00940000160160 #32	ENSGT00940000161094	ENSGT00940000153988.A #33	ENSGT00940000155773.b #34	ENSGT00940000154574.d #35	ENSGT00940000155655.B #36	ENSGT00940000157230 #37	ENSGT00940000155359	ENSGT00530000063836.a
Equus	ANCESTRAL SPECIES	18	ENSGT00390000015050	ENSGT00940000157541 #7	ENSGT00530000063686.a.b #8	ENSGT00530000063686.a.a #9	ENSGT00940000157201 #10	ENSGT00390000012204 #11	ENSGT00940000154533.b.d #12	ENSGT00940000154714 #13	ENSGT00950000182837.b.b #14	ENSGT00940000157055 #15	ENSGT00940000155515.a.b.b #16	ENSGT00930000150980.a #18	ENSGT00390000009987 #19	ENSGT00390000010523.c.b #20	ENSGT00940000158904 #21	ENSGT01080000257365.b.a.a.b.a #22	ENSGT00950000183038.a.b.b.b #26	ENSGT00390000001718 #27	ENSGT00940000159241 #28	ENSGT01090000260082.d.a.a.a.b #29	ENSGT00530000063734.a #30	ENSGT00940000158842 #31	ENSGT00940000160160 #32	ENSGT00940000153988.A #33	ENSGT00940000155773.b #34	ENSGT00940000154574.d #35	ENSGT00940000155655.B #36	ENSGT00940000157230 #37	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Horse	MODERN SPECIES	9	RND3 (ENSECAG00000021310) #7	RBM43 (ENSECAG00000000566) #8	NMI (ENSECAG00000006801) #9	TNFAIP6 (ENSECAG00000012104) #10	RIF1 (ENSECAG00000012679) #11	NEB (ENSECAG00000020638) #12	ARL5A (ENSECAG00000023672) #13	CACNB4 (ENSECAG00000056636) #14	STAM2 (ENSECAG00000021355) #15	FMNL2 (ENSECAG00000011111) #16	ENSECAG00000001048 #17	PRPF40A (ENSECAG00000009113) #18	ARL6IP6 (ENSECAG00000007580) #19	RPRM (ENSECAG00000001246) #20	GALNT13 (ENSECAG00000007821) #21	KCNJ3 (ENSECAG00000001276) #22	ENSECAG00000046581 #23	ENSECAG00000002256 #24	ENSECAG00000058726 #25	NR4A2 (ENSECAG00000014232) #26	GPD2 (ENSECAG00000018290) #27	GALNT5 (ENSECAG00000012388) #28	ERMN (ENSECAG00000017073) #29	CYTIP (ENSECAG00000017457) #30	ACVR1C (ENSECAG00000019682) #31	ACVR1 (ENSECAG00000018902) #32	CCDC148 (ENSECAG00000003553) #33	PKP4 (ENSECAG00000014290) #34	DAPL1 (ENSECAG00000015671) #35	TANC1 (ENSECAG00000018415) #36	WDSUB1 (ENSECAG00000001100) #37
Donkey	MODERN SPECIES	24	RND3 (ENSEASG00005038021) #7	RBM43 (ENSEASG00005033269) #8	NMI (ENSEASG00005023440) #9	TNFAIP6 (ENSEASG00005023439) #10	RIF1 (ENSEASG00005023434) #11	ENSEASG00005038507 #12	ENSEASG00005023364 #12	ARL5A (ENSEASG00005023347) #13	CACNB4 (ENSEASG00005023346) #14	STAM2 (ENSEASG00005023344) #15	FMNL2 (ENSEASG00005023341) #16	PRPF40A (ENSEASG00005023328) #18	ARL6IP6 (ENSEASG00005023320) #19	RPRM (ENSEASG00005023316) #20	GALNT13 (ENSEASG00005023315) #21	KCNJ3 (ENSEASG00005023313) #22	NR4A2 (ENSEASG00005023310) #26	GPD2 (ENSEASG00005023309) #27	GALNT5 (ENSEASG00005023306) #28	ERMN (ENSEASG00005026686) #29	ENSEASG00005029587 #30	ACVR1C (ENSEASG00005023296) #31	ACVR1 (ENSEASG00005023294) #32	CCDC148 (ENSEASG00005023292) #33	PKP4 (ENSEASG00005023266) #34	DAPL1 (ENSEASG00005023258) #35	TANC1 (ENSEASG00005023239) #36	WDSUB1 (ENSEASG00005023237) #37	BAZ2B (ENSEASG00005023209)	MARCHF7 (ENSEASG00005023165)	CD302 (ENSEASG00005025575)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00390000015050	ENSGT00940000157541 #7	ENSGT00530000063686.a.b #8	ENSGT00530000063686.a.a #9	ENSGT00940000157201 #10	ENSGT00390000012204 #11	ENSGT00940000154533.b.d #12	ENSGT00940000154714 #13	ENSGT00950000182837.b.b #14	ENSGT00940000157055 #15	ENSGT00940000155515.a.b.b #16	ENSGT00930000150980.a #18	ENSGT00390000009987 #19	ENSGT00390000010523.c.b #20	ENSGT00940000158904 #21	ENSGT01080000257365.b.a.a.b.a #22	ENSGT00950000183038.a.b.b.b #26	ENSGT00390000001718 #27	ENSGT00940000159241 #28	ENSGT01090000260082.d.a.a.a.b #29	ENSGT00530000063734.a #30	ENSGT00940000158842 #31	ENSGT00940000160160 #32	ENSGT00940000161094	ENSGT00940000153988.A #33	ENSGT00940000155773.b #34	ENSGT00940000154574.d #35	ENSGT00940000155655.B #36	ENSGT00940000157230 #37	ENSGT00940000155359	ENSGT00530000063836.a
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00390000015050	ENSGT00940000157541 #7	ENSGT00530000063686.a.b #8	ENSGT00530000063686.a.a #9	ENSGT00940000157201 #10	ENSGT00390000012204 #11	ENSGT00940000154533.b.d #12	ENSGT00940000154714 #13	ENSGT00950000182837.b.b #14	ENSGT00940000157055 #15	ENSGT00940000155515.a.b.b #16	ENSGT00930000150980.a #18	ENSGT00390000009987 #19	ENSGT00390000010523.c.b #20	ENSGT00940000158904 #21	ENSGT01080000257365.b.a.a.b.a #22	ENSGT00950000183038.a.b.b.b #26	ENSGT00390000001718 #27	ENSGT00940000159241 #28	ENSGT01090000260082.d.a.a.a.b #29	ENSGT00530000063734.a #30	ENSGT00940000158842 #31	ENSGT00940000160160 #32	ENSGT00940000161094	ENSGT00940000153988.A #33	ENSGT00940000155773.b #34	ENSGT00940000154574.d #35	ENSGT00940000155655.B #36	ENSGT00940000157230 #37	ENSGT00940000155359	ENSGT00530000063836.a
Microbat	MODERN SPECIES	1026							ARL5A (ENSMLUG00000003458) #13	CACNB4 (ENSMLUG00000003465) #14	STAM2 (ENSMLUG00000003477) #15	FMNL2 (ENSMLUG00000014867) #16	PRPF40A (ENSMLUG00000014881) #18	ARL6IP6 (ENSMLUG00000023268) #19	ENSMLUG00000030388	RPRM (ENSMLUG00000022854) #20	GALNT13 (ENSMLUG00000015972) #21	KCNJ3 (ENSMLUG00000010559) #22	ENSMLUG00000029954	ENSMLUG00000025509	NR4A2 (ENSMLUG00000008683) #26	GPD2 (ENSMLUG00000001655) #27	GALNT5 (ENSMLUG00000003542) #28	ENSMLUG00000003547 #29	CYTIP (ENSMLUG00000002426) #30	ACVR1C (ENSMLUG00000002433) #31	ACVR1 (ENSMLUG00000010119) #32
Greater horseshoe bat	MODERN SPECIES	26	ENSRFEG00010005006	RND3 (ENSRFEG00010005000) #7	RBM43 (ENSRFEG00010004990) #8	NMI (ENSRFEG00010004983) #9	TNFAIP6 (ENSRFEG00010004979) #10	RIF1 (ENSRFEG00010004943) #11	NEB (ENSRFEG00010003197) #12	ARL5A (ENSRFEG00010001991) #13	CACNB4 (ENSRFEG00010001762) #14	STAM2 (ENSRFEG00010001637) #15	FMNL2 (ENSRFEG00010001562) #16	PRPF40A (ENSRFEG00010001279) #18	ARL6IP6 (ENSRFEG00010001173) #19	RPRM (ENSRFEG00010001141) #20	GALNT13 (ENSRFEG00010001100) #21	KCNJ3 (ENSRFEG00010001072) #22	NR4A2 (ENSRFEG00010001043) #26	GPD2 (ENSRFEG00010001004) #27	GALNT5 (ENSRFEG00010000968) #28	ERMN (ENSRFEG00010000944) #29	CYTIP (ENSRFEG00010000916) #30	ACVR1C (ENSRFEG00010000861) #31	ACVR1 (ENSRFEG00010000822) #32	UPP2 (ENSRFEG00010000790)	CCDC148 (ENSRFEG00010000691) #33	ENSRFEG00010000642	PKP4 (ENSRFEG00010000530) #34	DAPL1 (ENSRFEG00010000436) #35	TANC1 (ENSRFEG00010000352) #36	WDSUB1 (ENSRFEG00010000284) #37	BAZ2B (ENSRFEG00010006183)
Megabat	MODERN SPECIES	1082															GALNT13 (ENSPVAG00000004568) #21	KCNJ3 (ENSPVAG00000004569) #22