Acanthomorphata ANCESTRAL SPECIES 45 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Euacanthomorphacea ANCESTRAL SPECIES 32 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Percomorphaceae ANCESTRAL SPECIES 30 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Percomorphaceae_B ANCESTRAL SPECIES 24 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Eupecaria_A ANCESTRAL SPECIES 26 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Eupecaria_B ANCESTRAL SPECIES 26 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Perciformes ANCESTRAL SPECIES 17 ENSGT00950000182980.a.b.b.b ENSGT00990000206002 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Cottioidei ANCESTRAL SPECIES 36 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 ENSGT00390000000747 Lumpfish MODERN SPECIES 6 eif3s6ip (ENSCLMG00005021658) #7 SMOC2 (ENSCLMG00005021800) #8 dact2 (ENSCLMG00005021801) #9 lrrfip2 (ENSCLMG00005021816) #10 mlh1 (ENSCLMG00005021832) #11 ENSCLMG00005021838 #12 ENSCLMG00005021841 #13 HERC4 (ENSCLMG00005021848) #14 cox5b2 (ENSCLMG00005021881) #15 ENSCLMG00005021882 #16 STK32C (ENSCLMG00005021884) #17 LRRC27 (ENSCLMG00005021945) #18 PWWP2B (ENSCLMG00005021947) #19 INPP5A (ENSCLMG00005021958) #20 nkx6.2 (ENSCLMG00005021971) #21 valopa (ENSCLMG00005021972) #22 ENSCLMG00005021973 #23 ENSCLMG00005021974 #24 ENSCLMG00005021975 #25 ADGRA1 (ENSCLMG00005021978) #26 ENSCLMG00005022000 #27 ENSCLMG00005022004 #28 vox (ENSCLMG00005022005) #29 ENSCLMG00005022007 #30 dntt (ENSCLMG00005022012) #31 ENSCLMG00005022078 #32 CCNJ (ENSCLMG00005022079) #33 BTAF1 (ENSCLMG00005022092) #34 cpeb3 (ENSCLMG00005022098) #35 marchf5 (ENSCLMG00005022111) #36 ide (ENSCLMG00005022120) #37 Stickleback MODERN SPECIES 6 haao (ENSGACG00000002666) papolg (ENSGACG00000002718) ENSGACG00000002730 pex13 (ENSGACG00000002732) SANBR (ENSGACG00000002736) XPO1 (ENSGACG00000002743) pcgf6 (ENSGACG00000002779) inaa (ENSGACG00000002787) ENSGACG00000002791 #16 STK32C (ENSGACG00000002804) #17 ENSGACG00000002807 ENSGACG00000002810 PWWP2B (ENSGACG00000002816) #19 INPP5A (ENSGACG00000002820) #20 nkx6.2 (ENSGACG00000002824) #21 valopa (ENSGACG00000002828) #22 ENSGACG00000002833 #24 ENSGACG00000002838 #24 ENSGACG00000002843 #25 ADGRA1 (ENSGACG00000002848) #26 ENSGACG00000002851 ENSGACG00000002854 #28 vox (ENSGACG00000002870) #29 ENSGACG00000002875 ##29 ENSGACG00000002877 #30 dntt (ENSGACG00000002880) #31 blnk (ENSGACG00000002905) #32 CCNJ (ENSGACG00000002931) #33 BTAF1 (ENSGACG00000002936) #34 cpeb3 (ENSGACG00000002944) #35 marchf5 (ENSGACG00000002949) #36 Perciformes_a ANCESTRAL SPECIES 40 ENSGT00950000182980.a.b.b.b ENSGT00990000206002 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Pike perch MODERN SPECIES 62 calm2a (ENSSLUG00000006958) ENSSLUG00000006966 TTC7A (ENSSLUG00000006976) mcfd2 (ENSSLUG00000007002) ENSSLUG00000007008 socs5b (ENSSLUG00000007028) rhoq (ENSSLUG00000007036) mxtx1 (ENSSLUG00000007046) ENSSLUG00000007058 ENSSLUG00000007070 #16 STK32C (ENSSLUG00000007119) #17 ENSSLUG00000007193 PWWP2B (ENSSLUG00000007199) #19 INPP5A (ENSSLUG00000007233) #20 nkx6.2 (ENSSLUG00000007911) #21 valopa (ENSSLUG00000007918) #22 ENSSLUG00000007934 #24 ENSSLUG00000007938 #24 ENSSLUG00000007942 #24 ENSSLUG00000007949 #25 ADGRA1 (ENSSLUG00000007973) #26 Channel bull blenny MODERN SPECIES 6 calm2a (ENSCGOG00000009161) TTC7A (ENSCGOG00000009140) mcfd2 (ENSCGOG00000009135) ENSCGOG00000009126 socs5b (ENSCGOG00000009122) ENSCGOG00000009112 rhoq (ENSCGOG00000009097) mxtx1 (ENSCGOG00000009094) ENSCGOG00000009091 ENSCGOG00000009085 #16 STK32C (ENSCGOG00000008934) #17 ENSCGOG00000008926 #18 PWWP2B (ENSCGOG00000008924) #19 INPP5A (ENSCGOG00000008304) #20 nkx6.2 (ENSCGOG00000008283) #21 valopa (ENSCGOG00000008270) #22 CFAP46 (ENSCGOG00000008262) #24 ENSCGOG00000008256 #24 ENSCGOG00000008249 #25 ENSCGOG00000008239 ENSCGOG00000008231 ADGRA1 (ENSCGOG00000008223) #26 KNDC1 (ENSCGOG00000008214) #28 vox (ENSCGOG00000008212) #29 ENSCGOG00000008208 ENSCGOG00000008206 #30 dntt (ENSCGOG00000008120) #31 blnk (ENSCGOG00000008100) #32 ENSCGOG00000008096 CCNJ (ENSCGOG00000008091) #33 BTAF1 (ENSCGOG00000007499) #34 Eupecaria_C ANCESTRAL SPECIES 28 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Gilthead seabream MODERN SPECIES 6 TTC7A (ENSSAUG00010009599) mcfd2 (ENSSAUG00010009594) ENSSAUG00010009593 socs5b (ENSSAUG00010009591) ENSSAUG00010009589 rhoq (ENSSAUG00010009587) mxtx1 (ENSSAUG00010009584) ENSSAUG00010009582 ENSSAUG00010009574 #16 STK32C (ENSSAUG00010008986) #17 LRRC27 (ENSSAUG00010008974) #18 PWWP2B (ENSSAUG00010008973) #19 INPP5A (ENSSAUG00010008928) #20 nkx6.2 (ENSSAUG00010008921) #21 ENSSAUG00010008918 valopa (ENSSAUG00010008916) #22 ENSSAUG00010008913 #24 ENSSAUG00010008909 #24 ENSSAUG00010008899 #25 ADGRA1 (ENSSAUG00010008894) #26 KNDC1 (ENSSAUG00010008882) #28 vox (ENSSAUG00010008879) #29 ENSSAUG00010008878 ##29 ENSSAUG00010008875 #30 dntt (ENSSAUG00010008857) #31 blnk (ENSSAUG00010008848) #32 ENSSAUG00010008845 CCNJ (ENSSAUG00010008843) #33 BTAF1 (ENSSAUG00010004978) #34 cpeb3 (ENSSAUG00010004913) #35 marchf5 (ENSSAUG00010004891) #36 Eupercaria_incertae_sedis ANCESTRAL SPECIES 32 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 European seabass MODERN SPECIES 1 si:ch211-93n23.7 (ENSDLAG00005029780) TTC7A (ENSDLAG00005009409) mcfd2 (ENSDLAG00005026903) ENSDLAG00005009428 socs5b (ENSDLAG00005032498) ENSDLAG00005009438 ENSDLAG00005009441 ENSDLAG00005009445 ENSDLAG00005009450 ENSDLAG00005009455 #16 STK32C (ENSDLAG00005009501) #17 ENSDLAG00005010271 PWWP2B (ENSDLAG00005010295) #19 INPP5A (ENSDLAG00005029925) #20 nkx6.2 (ENSDLAG00005010508) #21 valopa (ENSDLAG00005010514) #22 CFAP46 (ENSDLAG00005010550) #24 ENSDLAG00005030523 #25 ADGRA1 (ENSDLAG00005010601) #26 KNDC1 (ENSDLAG00005010811) #28 vox (ENSDLAG00005010862) #29 ENSDLAG00005032121 ##29 ENSDLAG00005033621 #30 dntt (ENSDLAG00005010884) #31 blnk (ENSDLAG00005011223) #32 ENSDLAG00005011261 ENSDLAG00005011266 #33 BTAF1 (ENSDLAG00005011308) #34 cpeb3 (ENSDLAG00005031540) #35 IDE (ENSDLAG00005012101) #37 marchf5 (ENSDLAG00005012046) #36 Large yellow croaker MODERN SPECIES 2 TTC7A (ENSLCRG00005008446) ENSLCRG00005008452 mcfd2 (ENSLCRG00005008454) ENSLCRG00005008455 socs5b (ENSLCRG00005008456) ENSLCRG00005008457 rhoq (ENSLCRG00005008460) mxtx1 (ENSLCRG00005008465) tmem254 (ENSLCRG00005008467) ENSLCRG00005008469 #16 STK32C (ENSLCRG00005008477) #17 ENSLCRG00005008493 PWWP2B (ENSLCRG00005008494) #19 INPP5A (ENSLCRG00005008504) #20 nkx6.2 (ENSLCRG00005008864) #21 valopa (ENSLCRG00005008865) #22 ENSLCRG00005008866 #24 ENSLCRG00005008867 #24 ENSLCRG00005008868 #25 ADGRA1 (ENSLCRG00005008872) #26 KNDC1 (ENSLCRG00005009137) #28 vox (ENSLCRG00005009145) #29 ENSLCRG00005009147 ##29 ENSLCRG00005009148 #30 dntt (ENSLCRG00005009153) #31 blnk (ENSLCRG00005009158) #32 ENSLCRG00005009170 CCNJ (ENSLCRG00005000078) #33 BTAF1 (ENSLCRG00005000304) #34 cpeb3 (ENSLCRG00005003544) #35 marchf5 (ENSLCRG00005003726) #36 Ballan wrasse MODERN SPECIES 161 si:ch211-93n23.7 (ENSLBEG00000010293) TTC7A (ENSLBEG00000009868) mcfd2 (ENSLBEG00000009660) PROP1 (ENSLBEG00000009650) socs5b (ENSLBEG00000009632) rhoq (ENSLBEG00000009597) mxtx1 (ENSLBEG00000009575) tmem254 (ENSLBEG00000009547) ENSLBEG00000009458 #16 STK32C (ENSLBEG00000009387) #17 ENSLBEG00000009354 ENSLBEG00000009335 PWWP2B (ENSLBEG00000009309) #19 INPP5A (ENSLBEG00000009250) #20 nkx6.2 (ENSLBEG00000009205) #21 valopa (ENSLBEG00000009165) #22 ENSLBEG00000009108 #24 ENSLBEG00000009064 #25 Tetraodontidae ANCESTRAL SPECIES 48 ENSGT00950000182980.a.b.b.b ENSGT00990000206002 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 ENSGT00390000000747 Fugu MODERN SPECIES 16 ENSTRUG00000024614 ENSTRUG00000023610 TTC7A (ENSTRUG00000008737) mcfd2 (ENSTRUG00000009161) ENSTRUG00000009191 socs5b (ENSTRUG00000022095) rhoq (ENSTRUG00000024700) mxtx1 (ENSTRUG00000009443) ENSTRUG00000029306 ENSTRUG00000009534 #16 STK32C (ENSTRUG00000033196) #17 ENSTRUG00000032270 #18 PWWP2B (ENSTRUG00000009585) #19 INPP5A (ENSTRUG00000009619) #20 nkx6.2 (ENSTRUG00000010013) #21 valopa (ENSTRUG00000010077) #22 ENSTRUG00000030286 #24 ENSTRUG00000031713 #25 ADGRA1 (ENSTRUG00000010484) #26 ENSTRUG00000031127 #28 vox (ENSTRUG00000010857) #29 ENSTRUG00000010892 #30 ENSTRUG00000031503 ENSTRUG00000028209 dntt (ENSTRUG00000010905) #31 ENSTRUG00000028294 #32 ENSTRUG00000021277 CCNJ (ENSTRUG00000011249) #33 BTAF1 (ENSTRUG00000005368) #34 cpeb3 (ENSTRUG00000011309) #35 marchf5 (ENSTRUG00000027284) #36 Tetraodon MODERN SPECIES 26 calm2a (ENSTNIG00000017098) ENSTNIG00000000458 ENSTNIG00000017097 mcfd2 (ENSTNIG00000017096) ENSTNIG00000017095 socs5b (ENSTNIG00000017094) rhoq (ENSTNIG00000017093) mxtx1 (ENSTNIG00000017092) tmem254 (ENSTNIG00000017091) ENSTNIG00000017090 #16 STK32C (ENSTNIG00000017089) #17 ENSTNIG00000000261 #18 PWWP2B (ENSTNIG00000017088) #19 INPP5A (ENSTNIG00000017087) #20 nkx6.2 (ENSTNIG00000017086) #21 valopa (ENSTNIG00000017085) #22 ENSTNIG00000000187 #24 ENSTNIG00000017084 #25 ENSTNIG00000017083 ADGRA1 (ENSTNIG00000017082) #26 KNDC1 (ENSTNIG00000017081) #28 vox (ENSTNIG00000001621) #29 ENSTNIG00000017080 #30 ENSTNIG00000017079 dntt (ENSTNIG00000017078) #31 blnk (ENSTNIG00000001501) #32 tiprl (ENSTNIG00000014243) PPP1R14A (ENSTNIG00000014242) ENSTNIG00000014241 tfap2b (ENSTNIG00000014240) tfap2b (ENSTNIG00000014239) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Anabantaria ANCESTRAL SPECIES 17 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Anabantoidei ANCESTRAL SPECIES 17 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 ENSGT00390000000747 Climbing perch MODERN SPECIES 6 si:ch211-93n23.7 (ENSATEG00000009420) TTC7A (ENSATEG00000009434) mcfd2 (ENSATEG00000009468) ENSATEG00000009486 socs5b (ENSATEG00000009505) ENSATEG00000009510 ENSATEG00000009520 ENSATEG00000009533 ENSATEG00000009538 #16 ENSATEG00000009581 STK32C (ENSATEG00000009593) #17 ENSATEG00000009604 PWWP2B (ENSATEG00000009620) #19 INPP5A (ENSATEG00000009627) #20 nkx6.2 (ENSATEG00000028200) #21 valopa (ENSATEG00000009727) #22 ENSATEG00000010016 #24 ENSATEG00000010081 #25 ADGRA1 (ENSATEG00000010152) #26 ENSATEG00000025346 #28 ENSATEG00000028993 #28 vox (ENSATEG00000028903) #29 ENSATEG00000010339 dntt (ENSATEG00000010373) #31 blnk (ENSATEG00000010409) #32 ENSATEG00000010449 ENSATEG00000010453 #33 BTAF1 (ENSATEG00000010510) #34 cpeb3 (ENSATEG00000010649) #35 marchf5 (ENSATEG00000010690) #36 ENSATEG00000025422 Siamese fighting fish MODERN SPECIES 6 ENSBSLG00000021077 calm2a (ENSBSLG00000021159) TTC7A (ENSBSLG00000021328) mcfd2 (ENSBSLG00000021690) ENSBSLG00000021713 socs5b (ENSBSLG00000021738) rhoq (ENSBSLG00000021750) mxtx1 (ENSBSLG00000021776) ENSBSLG00000021787 ENSBSLG00000021800 #16 STK32C (ENSBSLG00000021835) #17 ENSBSLG00000021937 PWWP2B (ENSBSLG00000021951) #19 INPP5A (ENSBSLG00000021972) #20 nkx6.2 (ENSBSLG00000022009) #21 valopa (ENSBSLG00000022018) #22 ENSBSLG00000022061 ENSBSLG00000022194 #24 ENSBSLG00000022199 #24 ENSBSLG00000022203 #25 ENSBSLG00000022215 #26 ENSBSLG00000022229 #28 ENSBSLG00000022244 #28 vox (ENSBSLG00000022246) #29 vox (ENSBSLG00000022251) #29 ENSBSLG00000002274 #30 dntt (ENSBSLG00000002392) #31 blnk (ENSBSLG00000002470) #32 ENSBSLG00000002535 CCNJ (ENSBSLG00000002548) #33 BTAF1 (ENSBSLG00000002717) #34 Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 6 calm2a (ENSMAMG00000010998) si:ch211-93n23.7 (ENSMAMG00000011013) TTC7A (ENSMAMG00000011025) mcfd2 (ENSMAMG00000011042) ENSMAMG00000011055 socs5b (ENSMAMG00000011056) ENSMAMG00000027941 ENSMAMG00000011075 ENSMAMG00000011092 ENSMAMG00000011112 #16 STK32C (ENSMAMG00000011136) #17 ENSMAMG00000011167 PWWP2B (ENSMAMG00000011185) #19 INPP5A (ENSMAMG00000011199) #20 nkx6.2 (ENSMAMG00000026922) #21 ENSMAMG00000011294 #22 ENSMAMG00000024517 #24 ENSMAMG00000027819 #24 ENSMAMG00000012497 #24 ENSMAMG00000012514 #25 ENSMAMG00000012538 ENSMAMG00000012543 ADGRA1 (ENSMAMG00000012554) #26 KNDC1 (ENSMAMG00000012563) #28 vox (ENSMAMG00000012590) #29 ENSMAMG00000026979 ##29 ENSMAMG00000012605 #30 dntt (ENSMAMG00000012615) #31 blnk (ENSMAMG00000012653) #32 ENSMAMG00000012688 ENSMAMG00000012696 #33 Zig-zag eel MODERN SPECIES 54 ENSMAMG00000018378 #22 Carangaria ANCESTRAL SPECIES 19 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Pleuronectoidei ANCESTRAL SPECIES 28 ENSGT00940000167711.a.b ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 ENSGT00390000000747 Turbot MODERN SPECIES 6 ENSSMAG00000015375 ENSSMAG00000023870 ENSSMAG00000015338 ENSSMAG00000015262 mcfd2 (ENSSMAG00000026884) ENSSMAG00000015240 socs5b (ENSSMAG00000015236) ENSSMAG00000032665 ENSSMAG00000015185 ENSSMAG00000029523 ENSSMAG00000015139 #16 STK32C (ENSSMAG00000015069) #17 PWWP2B (ENSSMAG00000015035) #19 INPP5A (ENSSMAG00000014975) #20 nkx6.2 (ENSSMAG00000035901) #21 valopa (ENSSMAG00000014945) #22 ENSSMAG00000014810 #24 ENSSMAG00000014747 #25 ENSSMAG00000014683 #26 KNDC1 (ENSSMAG00000014581) #28 vox (ENSSMAG00000014574) #29 ENSSMAG00000014568 #30 dntt (ENSSMAG00000014542) #31 blnk (ENSSMAG00000014278) #32 ENSSMAG00000014259 ENSSMAG00000014232 #33 BTAF1 (ENSSMAG00000014035) #34 cpeb3 (ENSSMAG00000013924) #35 marchf5 (ENSSMAG00000013888) #36 ide (ENSSMAG00000013822) #37 kmo (ENSSMAG00000013784) Tongue sole MODERN SPECIES 3 ikzf1 (ENSCSEG00000008620) vwc2 (ENSCSEG00000009963) MOCOS (ENSCSEG00000009978) zgc:110045 (ENSCSEG00000010020) si:ch211-117n7.7 (ENSCSEG00000010068) tm9sf3 (ENSCSEG00000010093) prdx3 (ENSCSEG00000010149) sfxn4 (ENSCSEG00000010159) dennd10 (ENSCSEG00000010175) vox (ENSCSEG00000010208) #29 ENSCSEG00000010212 KNDC1 (ENSCSEG00000010219) #28 ADGRA1 (ENSCSEG00000010321) #26 ENSCSEG00000010432 #25 ENSCSEG00000010456 #24 valopa (ENSCSEG00000010484) #22 nkx6.2 (ENSCSEG00000010490) #21 INPP5A (ENSCSEG00000010496) #20 PWWP2B (ENSCSEG00000010521) #19 STK32C (ENSCSEG00000010530) #17 ENSCSEG00000010547 #16 tmem254 (ENSCSEG00000010559) mxtx1 (ENSCSEG00000010567) rhoq (ENSCSEG00000010572) socs5b (ENSCSEG00000010578) prorsd1 (ENSCSEG00000010585) usp54a (ENSCSEG00000010597) ENSCSEG00000010648 ENSCSEG00000010689 mad2l1bp (ENSCSEG00000010706) mgme1 (ENSCSEG00000010715) Carangaria_A ANCESTRAL SPECIES 31 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Seriola ANCESTRAL SPECIES 14 ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00390000013481.c.b.b.d ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000170679 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Greater amberjack MODERN SPECIES 30 ENSSDUG00000000341 TTC7A (ENSSDUG00000000264) mcfd2 (ENSSDUG00000000233) ENSSDUG00000000218 socs5b (ENSSDUG00000000213) ENSSDUG00000000164 rhoq (ENSSDUG00000000093) mxtx1 (ENSSDUG00000020571) ENSSDUG00000020551 ENSSDUG00000020529 #16 STK32C (ENSSDUG00000020492) #17 ENSSDUG00000020451 PWWP2B (ENSSDUG00000020437) #19 INPP5A (ENSSDUG00000020408) #20 nkx6.2 (ENSSDUG00000020400) #21 valopa (ENSSDUG00000020386) #22 ENSSDUG00000020270 #24 ENSSDUG00000020219 #25 ADGRA1 (ENSSDUG00000020182) #26 KNDC1 (ENSSDUG00000020142) #28 vox (ENSSDUG00000020133) #29 ENSSDUG00000020122 ##29 ENSSDUG00000020119 #30 dntt (ENSSDUG00000019989) #31 blnk (ENSSDUG00000019940) #32 ENSSDUG00000019928 CCNJ (ENSSDUG00000019912) #33 BTAF1 (ENSSDUG00000019837) #34 cpeb3 (ENSSDUG00000019766) #35 marchf5 (ENSSDUG00000019714) #36 ide (ENSSDUG00000019622) #37 Yellowtail amberjack MODERN SPECIES 3109 si:ch211-93n23.7 (ENSSLDG00000000731) TTC7A (ENSSLDG00000000654) mcfd2 (ENSSLDG00000000632) ENSSLDG00000000608 socs5b (ENSSLDG00000000598) ENSSLDG00000000354 rhoq (ENSSLDG00000000306) mxtx1 (ENSSLDG00000000243) ENSSLDG00000000212 ENSSLDG00000000123 #16 STK32C (ENSSLDG00000021935) #17 ENSSLDG00000021920 PWWP2B (ENSSLDG00000021915) #19 INPP5A (ENSSLDG00000021836) #20 nkx6.2 (ENSSLDG00000021824) #21 valopa (ENSSLDG00000021805) #22 ENSSLDG00000021778 #24 ENSSLDG00000021755 #25 ADGRA1 (ENSSLDG00000021741) #26 ENSSLDG00000021735 #28 vox (ENSSLDG00000021724) #29 ENSSLDG00000021719 ##29 ENSSLDG00000021711 #30 dntt (ENSSLDG00000021672) #31 ENSSLDG00000021663 ENSSLDG00000021654 #32 ENSSLDG00000021646 CCNJ (ENSSLDG00000021633) #33 BTAF1 (ENSSLDG00000021505) #34 cpeb3 (ENSSLDG00000021438) #35 marchf5 (ENSSLDG00000021414) #36 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 412 valopa (ENSLCAG00010000719) #22 ENSLCAG00010000708 ENSLCAG00010000703 #24 ENSLCAG00010000653 #24 ENSLCAG00010000636 #25 ADGRA1 (ENSLCAG00010000600) #26 ENSLCAG00010000577 #28 Barramundi perch MODERN SPECIES 1789 ENSLCAG00010020082 #22 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Oryzias ANCESTRAL SPECIES 6 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000154866.B.a ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 ENSGT00940000153577.A ENSGT00510000046499.f ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.k.a #37 Oryzias_b ANCESTRAL SPECIES 49 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000154866.B.a ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 ENSGT00940000153577.A ENSGT00510000046499.f ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.k.a #37 ENSGT00940000157736 Indian medaka MODERN SPECIES 27 RIN2 (ENSOMEG00000001939) ENSOMEG00000001925 pcca (ENSOMEG00000001912) ENSOMEG00000001896 ENSOMEG00000000998 CDT1 (ENSOMEG00000001880) ENSOMEG00000001859 cbr1 (ENSOMEG00000001847) mxtx1 (ENSOMEG00000001842) ENSOMEG00000001836 ENSOMEG00000000665 #16 STK32C (ENSOMEG00000001824) #17 PWWP2B (ENSOMEG00000001817) #19 INPP5A (ENSOMEG00000001808) #20 nkx6.2 (ENSOMEG00000001792) #21 valopa (ENSOMEG00000001785) #22 ENSOMEG00000001777 ENSOMEG00000001767 #24 ENSOMEG00000001759 #25 ENSOMEG00000001748 #26 ENSOMEG00000001733 #28 vox (ENSOMEG00000001730) #29 ENSOMEG00000001729 #30 dntt (ENSOMEG00000001723) #31 ENSOMEG00000001709 ENSOMEG00000001703 macroh2a2 (ENSOMEG00000001698) GBF1 (ENSOMEG00000001687) GBF1 (ENSOMEG00000001669) pitx3 (ENSOMEG00000001662) hspa12a (ENSOMEG00000001644) Javanese ricefish MODERN SPECIES 6 ENSOJAG00000015517 SLC24A3 (ENSOJAG00000015537) RIN2 (ENSOJAG00000015841) ENSOJAG00000015870 pcca (ENSOJAG00000015899) CDT1 (ENSOJAG00000018238) ENSOJAG00000018262 cbr1 (ENSOJAG00000018300) mxtx1 (ENSOJAG00000018319) tmem254 (ENSOJAG00000018330) ENSOJAG00000018344 #16 STK32C (ENSOJAG00000018392) #17 PWWP2B (ENSOJAG00000018710) #19 INPP5A (ENSOJAG00000018734) #20 nkx6.2 (ENSOJAG00000018968) #21 valopa (ENSOJAG00000018981) #22 ENSOJAG00000019031 #24 ENSOJAG00000005117 #24 ENSOJAG00000005135 #25 ADGRA1 (ENSOJAG00000005149) #26 ENSOJAG00000005165 #28 vox (ENSOJAG00000005173) #29 ENSOJAG00000005184 #30 dntt (ENSOJAG00000005201) #31 blnk (ENSOJAG00000005236) #32 ENSOJAG00000005271 CCNJ (ENSOJAG00000005276) #33 cpeb3 (ENSOJAG00000006321) #35 marchf5 (ENSOJAG00000006507) #36 ide (ENSOJAG00000006576) #37 cdc42ep3 (ENSOJAG00000007125) Oryzias_a ANCESTRAL SPECIES 4 ENSGT00390000007683 ENSGT00990000204611.d ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000154866.B.a ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 ENSGT00940000153577.A ENSGT00940000182531 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.k.a #37 Chinese medaka MODERN SPECIES 1329 RNF166 (ENSOSIG00000009927) cyp17a1 (ENSOSIG00000009662) borcs7 (ENSOSIG00000009658) ENSOSIG00000009656 ENSOSIG00000009426 RIN2 (ENSOSIG00000009424) ENSOSIG00000009423 pcca (ENSOSIG00000009007) PIEZO1 (ENSOSIG00000008364) ENSOSIG00000008353 ENSOSIG00000008352 #16 STK32C (ENSOSIG00000008351) #17 PWWP2B (ENSOSIG00000008350) #19 INPP5A (ENSOSIG00000008316) #20 nkx6.2 (ENSOSIG00000008305) #21 valopa (ENSOSIG00000008303) #22 ENSOSIG00000008301 ENSOSIG00000008298 #25 ADGRA1 (ENSOSIG00000008297) #26 ENSOSIG00000008294 #28 vox (ENSOSIG00000008292) #29 ENSOSIG00000008289 #30 Japanese Medaka HdrR MODERN SPECIES 6 PIEZO1 (ENSORLG00000000402) ENSORLG00000029276 CDT1 (ENSORLG00000000411) SETD4 (ENSORLG00000000434) ENSORLG00000029693 ENSORLG00000027490 cbr1 (ENSORLG00000000452) mxtx1 (ENSORLG00000000457) ENSORLG00000025443 ENSORLG00000000468 #16 STK32C (ENSORLG00000000480) #17 ENSORLG00000023918 PWWP2B (ENSORLG00000000489) #19 INPP5A (ENSORLG00000000540) #20 nkx6.2 (ENSORLG00000026825) #21 valopa (ENSORLG00000000556) #22 ENSORLG00000022977 #24 ENSORLG00000029700 ENSORLG00000000601 #25 ENSORLG00000030623 ADGRA1 (ENSORLG00000000620) #26 ENSORLG00000024250 #28 vox (ENSORLG00000000633) #29 ENSORLG00000024036 #30 dntt (ENSORLG00000000644) #31 ENSORLG00000029694 blnk (ENSORLG00000000661) #32 ENSORLG00000000665 ENSORLG00000000674 #33 BTAF1 (ENSORLG00000000700) #34 cpeb3 (ENSORLG00000000726) #35 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 NAME_4 ANCESTRAL SPECIES 58 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 ENSGT00390000000747 ENSGT01100000263502.A.a.b Sheepshead minnow MODERN SPECIES 520 INPP5A (ENSCVAG00000008169) #20 nkx6.2 (ENSCVAG00000008201) #21 valopa (ENSCVAG00000008251) #22 jag1b (ENSCVAG00000008444) BTBD3 (ENSCVAG00000000242) sptlc3 (ENSCVAG00000008555) ism1 (ENSCVAG00000008572) tasp1 (ENSCVAG00000008744) Mummichog MODERN SPECIES 2195 ENSFHEG00000020652 calm2a (ENSFHEG00000020657) TTC7A (ENSFHEG00000020687) mcfd2 (ENSFHEG00000020700) ENSFHEG00000020714 socs5b (ENSFHEG00000020721) rhoq (ENSFHEG00000020742) mxtx1 (ENSFHEG00000020765) ENSFHEG00000020772 ENSFHEG00000020811 #16 STK32C (ENSFHEG00000020845) #17 ENSFHEG00000020866 #18 PWWP2B (ENSFHEG00000020873) #19 INPP5A (ENSFHEG00000000519) #20 nkx6.2 (ENSFHEG00000020909) #21 valopa (ENSFHEG00000020929) #22 ENSFHEG00000020944 #24 ENSFHEG00000020954 #24 ENSFHEG00000020960 #25 ADGRA1 (ENSFHEG00000021011) #26 ENSFHEG00000021021 #28 vox (ENSFHEG00000021027) #29 ENSFHEG00000021033 #30 dntt (ENSFHEG00000021138) #31 blnk (ENSFHEG00000021156) #32 ENSFHEG00000021174 #33 BTAF1 (ENSFHEG00000021288) #34 cpeb3 (ENSFHEG00000021371) #35 marchf5 (ENSFHEG00000021388) #36 ide (ENSFHEG00000021532) #37 kmo (ENSFHEG00000021606) Poeciliinae ANCESTRAL SPECIES 16 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Poecilia ANCESTRAL SPECIES 11 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 NAME_6 ANCESTRAL SPECIES 203 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 Amazon molly MODERN SPECIES 449 rhoq (ENSPFOG00000004834) ENSPFOG00000004918 tmem254 (ENSPFOG00000004937) ENSPFOG00000005014 #16 ENSPFOG00000005146 STK32C (ENSPFOG00000005239) #17 ENSPFOG00000024408 #18 PWWP2B (ENSPFOG00000005628) #19 INPP5A (ENSPFOG00000005662) #20 nkx6.2 (ENSPFOG00000005993) #21 INPP5A (ENSPFOG00000006039) #20 nkx6.2 (ENSPFOG00000006051) #21 valopa (ENSPFOG00000006068) #22 ENSPFOG00000022798 #24 ENSPFOG00000006137 #24 ENSPFOG00000006396 #25 ENSPFOG00000006646 #26 KNDC1 (ENSPFOG00000007111) #28 vox (ENSPFOG00000007396) #29 ENSPFOG00000020031 #30 Sailfin molly MODERN SPECIES 2785 valopa (ENSPLAG00000007621) #22 Guppy MODERN SPECIES 445 ENSPREG00000010681 calm2a (ENSPREG00000010724) TTC7A (ENSPREG00000010741) ENSPREG00000010761 mcfd2 (ENSPREG00000010773) ENSPREG00000010783 socs5b (ENSPREG00000010792) rhoq (ENSPREG00000010809) ENSPREG00000010831 tmem254 (ENSPREG00000010846) ENSPREG00000010867 #16 STK32C (ENSPREG00000010915) #17 ENSPREG00000010951 #18 PWWP2B (ENSPREG00000010970) #19 nkx6.2 (ENSPREG00000010999) #21 valopa (ENSPREG00000011010) #22 ENSPREG00000011030 #24 ENSPREG00000011069 ENSPREG00000011098 ENSPREG00000011122 slc22a15 (ENSPREG00000011151) ENSPREG00000011177 kif11 (ENSPREG00000011297) EGR2 (ENSPREG00000011993) adob (ENSPREG00000012002) foxg1d (ENSPREG00000012020) slc30a6 (ENSPREG00000012044) sult6b1 (ENSPREG00000012075) ENSPREG00000012118 EML6 (ENSPREG00000012147) ENSPREG00000012218 Platyfish MODERN SPECIES 14 ENSXMAG00000007473 calm2a (ENSXMAG00000007477) TTC7A (ENSXMAG00000007479) mcfd2 (ENSXMAG00000007510) ENSXMAG00000007514 socs5b (ENSXMAG00000019827) rhoq (ENSXMAG00000007515) mxtx1 (ENSXMAG00000007518) ENSXMAG00000007521 ENSXMAG00000007525 #16 STK32C (ENSXMAG00000007528) #17 ENSXMAG00000028891 #18 PWWP2B (ENSXMAG00000007540) #19 INPP5A (ENSXMAG00000007542) #20 nkx6.2 (ENSXMAG00000007554) #21 valopa (ENSXMAG00000029737) #22 ENSXMAG00000007566 #24 ENSXMAG00000017068 #25 ADGRA1 (ENSXMAG00000007574) #26 KNDC1 (ENSXMAG00000007589) #28 vox (ENSXMAG00000007597) #29 ENSXMAG00000019828 #30 dntt (ENSXMAG00000007601) #31 blnk (ENSXMAG00000025725) #32 CCNJ (ENSXMAG00000007625) #33 ENSXMAG00000025492 cpeb3 (ENSXMAG00000007652) #35 marchf5 (ENSXMAG00000007675) #36 ENSXMAG00000009019 ENSXMAG00000009048 EML4 (ENSXMAG00000009050) Aplocheiloidei ANCESTRAL SPECIES 230 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 Mangrove rivulus MODERN SPECIES 222 INPP5A (ENSKMAG00000015822) #20 nkx6.2 (ENSKMAG00000015807) #21 valopa (ENSKMAG00000015793) #22 ENSKMAG00000015766 #24 ENSKMAG00000015745 #25 ADGRA1 (ENSKMAG00000015735) #26 KNDC1 (ENSKMAG00000015708) #28 vox (ENSKMAG00000015693) #29 ENSKMAG00000015689 #30 dntt (ENSKMAG00000015664) #31 Turquoise killifish MODERN SPECIES 1012 valopa (ENSNFUG00015011975) #22 Ovalentaria_B ANCESTRAL SPECIES 25 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Pomacentridae ANCESTRAL SPECIES 36 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Pomacentridae_A ANCESTRAL SPECIES 41 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 555 ENSAPOG00000020675 #22 ENSAPOG00000020645 #24 ENSAPOG00000020625 #24 ENSAPOG00000020556 #25 Spiny chromis MODERN SPECIES 3179 valopa (ENSAPOG00000005266) #22 Amphiprion ANCESTRAL SPECIES 47 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000162292 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000177920 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 Clown anemonefish MODERN SPECIES 1703 nkx6.2 (ENSAOCG00000006772) #21 valopa (ENSAOCG00000006757) #22 ENSAOCG00000000333 #24 ENSAOCG00000006729 #24 ENSAOCG00000006691 #25 ADGRA1 (ENSAOCG00000000323) #26 ENSAOCG00000006654 #28 ENSAOCG00000006638 #28 Orange clownfish MODERN SPECIES 12 calm2a (ENSAPEG00000006472) si:ch211-93n23.7 (ENSAPEG00000006439) TTC7A (ENSAPEG00000006408) mcfd2 (ENSAPEG00000006376) ENSAPEG00000006362 socs5b (ENSAPEG00000006338) rhoq (ENSAPEG00000006311) mxtx1 (ENSAPEG00000006288) tmem254 (ENSAPEG00000006280) ENSAPEG00000006236 #16 STK32C (ENSAPEG00000006194) #17 ENSAPEG00000006153 #18 PWWP2B (ENSAPEG00000006145) #19 INPP5A (ENSAPEG00000006102) #20 nkx6.2 (ENSAPEG00000006080) #21 valopa (ENSAPEG00000006064) #22 ENSAPEG00000006047 #24 ENSAPEG00000005996 #24 ENSAPEG00000005962 #25 ENSAPEG00000005860 ADGRA1 (ENSAPEG00000005838) #26 ENSAPEG00000005822 #28 vox (ENSAPEG00000005806) #29 ENSAPEG00000005784 ##29 ENSAPEG00000005778 #30 dntt (ENSAPEG00000005646) #31 blnk (ENSAPEG00000005568) #32 ENSAPEG00000005536 CCNJ (ENSAPEG00000005522) #33 BTAF1 (ENSAPEG00000005376) #34 cpeb3 (ENSAPEG00000005329) #35 Bicolor damselfish MODERN SPECIES 1621 valopa (ENSSPAG00000015356) #22 ENSSPAG00000015322 #24 Cichlidae ANCESTRAL SPECIES 13 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780 #37 Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.p #37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.p #37 Haplochromini ANCESTRAL SPECIES 10 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000165215.b ##29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.p #37 Burton s mouthbrooder MODERN SPECIES 481 calm2a (ENSHBUG00000008419) si:ch211-93n23.7 (ENSHBUG00000000209) TTC7A (ENSHBUG00000008456) mcfd2 (ENSHBUG00000008473) ENSHBUG00000008480 socs5b (ENSHBUG00000008489) rhoq (ENSHBUG00000008514) ENSHBUG00000008528 ENSHBUG00000008541 ENSHBUG00000008604 #16 STK32C (ENSHBUG00000008646) #17 ENSHBUG00000008653 #18 PWWP2B (ENSHBUG00000000215) #19 INPP5A (ENSHBUG00000008724) #20 nkx6.2 (ENSHBUG00000008756) #21 valopa (ENSHBUG00000008799) #22 Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000164759 #30 ENSGT00940000158584 #31 ENSGT00940000155715 #32 ENSGT00940000160595.a.a ENSGT00940000156981 #33 ENSGT00940000157500 #34 ENSGT00940000158949 #35 ENSGT00390000009948.c #36 ENSGT00940000155780.p #37 ENSGT00940000155780.o #37 P. nyererei MODERN SPECIES 357 ENSPNYG00000006335 ENSPNYG00000006295 calm2a (ENSPNYG00000006272) si:ch211-93n23.7 (ENSPNYG00000006257) TTC7A (ENSPNYG00000006096) mcfd2 (ENSPNYG00000006022) ENSPNYG00000006008 socs5b (ENSPNYG00000005996) rhoq (ENSPNYG00000005981) ENSPNYG00000005967 ENSPNYG00000005941 #16 STK32C (ENSPNYG00000005894) #17 PWWP2B (ENSPNYG00000005877) #19 INPP5A (ENSPNYG00000005824) #20 nkx6.2 (ENSPNYG00000005795) #21 valopa (ENSPNYG00000005773) #22 ENSPNYG00000005725 #24 ENSPNYG00000005676 #25 ADGRA1 (ENSPNYG00000005639) #26 ENSPNYG00000005624 #28 vox (ENSPNYG00000005586) #29 ENSPNYG00000005561 #30 dntt (ENSPNYG00000005503) #31 ENSPNYG00000005468 #32 ENSPNYG00000005457 CCNJ (ENSPNYG00000005440) #33 BTAF1 (ENSPNYG00000005349) #34 cpeb3 (ENSPNYG00000005300) #35 marchf5 (ENSPNYG00000005261) #36 ide (ENSPNYG00000005074) #37 kmo (ENSPNYG00000005012) Haplochromini_B ANCESTRAL SPECIES 59 ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 ENSGT00940000154141.B ENSGT00940000165391 ENSGT00940000164285.a ENSGT00940000155970 ENSGT00940000154537.lb ENSGT00390000016042 ENSGT00600000084626 #16 ENSGT00940000160573 #17 ENSGT00390000007203 #18 ENSGT00940000160735 #19 ENSGT00390000015226.d #20 ENSGT00940000161547 #21 ENSGT01030000234549.a.b #22 ENSGT00570000079216 #24 ENSGT00940000164278 #25 ENSGT00940000160175.b #26 ENSGT00390000011408 #28 ENSGT00940000165215.a #29 ENSGT00940000177959 ENSGT00940000165707 ENSGT00950000183206.a.b.a.a.b.d ENSGT00940000159804 ENSGT01020000230360.c.b.a.b.b.d.b.b ENSGT00940000157686 ENSGT00940000153635.A ENSGT00940000158592 ENSGT00940000159359 ENSGT00940000156765.a.b Eastern happy MODERN SPECIES 4 si:ch211-93n23.7 (ENSACLG00000016569) TTC7A (ENSACLG00000016632) mcfd2 (ENSACLG00000016947) ENSACLG00000016952 socs5b (ENSACLG00000016971) rhoq (ENSACLG00000016986) ENSACLG00000017012 ENSACLG00000017026 ENSACLG00000017033 #16 STK32C (ENSACLG00000017108) #17 ENSACLG00000017200 LRRC27 (ENSACLG00000017210) #18 PWWP2B (ENSACLG00000017264) #19 INPP5A (ENSACLG00000017291) #20 nkx6.2 (ENSACLG00000017440) #21 valopa (ENSACLG00000017468) #22 CFAP46 (ENSACLG00000017504) #24 ENSACLG00000017665 #25 ENSACLG00000017692 ENSACLG00000017709 ENSACLG00000017723 #26 KNDC1 (ENSACLG00000017774) #28 vox (ENSACLG00000017850) #29 vent (ENSACLG00000017858) ENSACLG00000017879 #30 ENSACLG00000017891 dntt (ENSACLG00000017957) #31 ENSACLG00000018158 #32 ENSACLG00000018295 CCNJ (ENSACLG00000018307) #33 BTAF1 (ENSACLG00000018336) #34 Zebra mbuna MODERN SPECIES 1095 calm2a (ENSMZEG00005018099) si:ch211-93n23.7 (ENSMZEG00005018098) TTC7A (ENSMZEG00005018070) mcfd2 (ENSMZEG00005018060) ENSMZEG00005018057 socs5b (ENSMZEG00005018055) rhoq (ENSMZEG00005018052) ENSMZEG00005018050 ENSMZEG00005018049 ENSMZEG00005018046 #16 STK32C (ENSMZEG00005018031) #17 LRRC27 (ENSMZEG00005018023) #18 PWWP2B (ENSMZEG00005018021) #19 INPP5A (ENSMZEG00005018019) #20 nkx6.2 (ENSMZEG00005018013) #21 valopa (ENSMZEG00005012467) #22 ENSMZEG00005012435 ENSMZEG00005012425 ENSMZEG00005012412 ENSMZEG00005012402 ENSMZEG00005012395 ENSMZEG00005012386 ENSMZEG00005012379 ENSMZEG00005012374 ENSMZEG00005012358 #24 ENSMZEG00005012342 #25 ENSMZEG00005012324 #26 ENSMZEG00005012308 #28 ENSMZEG00005012305 #28 vox (ENSMZEG00005012301) #29 vent (ENSMZEG00005012295) Lyretail cichlid MODERN SPECIES 349 ENSNBRG00000019453 calm2a (ENSNBRG00000019426) si:ch211-93n23.7 (ENSNBRG00000019404) TTC7A (ENSNBRG00000019362) mcfd2 (ENSNBRG00000019344) ENSNBRG00000019331 socs5b (ENSNBRG00000019321) rhoq (ENSNBRG00000019299) ENSNBRG00000019284 ENSNBRG00000019266 ENSNBRG00000019239 #16 STK32C (ENSNBRG00000019203) #17 PWWP2B (ENSNBRG00000019188) #19 INPP5A (ENSNBRG00000019130) #20 nkx6.2 (ENSNBRG00000019104) #21 valopa (ENSNBRG00000018880) #22 ENSNBRG00000018710 #24 ENSNBRG00000018663 #25 ADGRA1 (ENSNBRG00000018642) #26 ENSNBRG00000018628 #28 ENSNBRG00000018619 ##29 ENSNBRG00000018600 #30 ENSNBRG00000018593 #30 dntt (ENSNBRG00000018516) #31 ENSNBRG00000018484 #32 ENSNBRG00000018479 CCNJ (ENSNBRG00000018463) #33 BTAF1 (ENSNBRG00000018377) #34 cpeb3 (ENSNBRG00000018343) #35 marchf5 (ENSNBRG00000018316) #36 ide (ENSNBRG00000018270) #37 Nile tilapia MODERN SPECIES 4 ENSONIG00000036065 ##29 vox (ENSONIG00000014851) #29 ENSONIG00000014855 #28 ENSONIG00000014860 #26 ENSONIG00000014863 #25 zgc:162816 (ENSONIG00000034617) ENSONIG00000022337 LRRC27 (ENSONIG00000030055) #18 PWWP2B (ENSONIG00000034603) #19 INPP5A (ENSONIG00000007492) #20 ENSONIG00000021280 ENSONIG00000033984 nkx6.2 (ENSONIG00000029020) #21 ENSONIG00000034911 ENSONIG00000039179 valopa (ENSONIG00000007484) #22 ENSONIG00000007480 #24 ENSONIG00000007473 #24 STK32C (ENSONIG00000007502) #17 ENSONIG00000007510 #16 ENSONIG00000042662 ENSONIG00000039859 ENSONIG00000036340 ENSONIG00000037366 ENSONIG00000032600 ENSONIG00000032248 rhoq (ENSONIG00000003044) ENSONIG00000042326 ENSONIG00000036965 ENSONIG00000030620 socs5b (ENSONIG00000020613) Midas cichlid MODERN SPECIES 989 ENSACIG00000014437 calm2a (ENSACIG00000014472) si:ch211-93n23.7 (ENSACIG00000015301) TTC7A (ENSACIG00000015319) mcfd2 (ENSACIG00000015394) ENSACIG00000015406 rhoq (ENSACIG00000015449) ENSACIG00000015464 tmem254 (ENSACIG00000015480) ENSACIG00000015519 #16 ENSACIG00000015553 STK32C (ENSACIG00000015592) #17 PWWP2B (ENSACIG00000015619) #19 INPP5A (ENSACIG00000015636) #20 nkx6.2 (ENSACIG00000015666) #21 valopa (ENSACIG00000015704) #22 ENSACIG00000015959 #24 ENSACIG00000016011 #25 Tiger tail seahorse MODERN SPECIES 312 ENSHCOG00000006353 TTC7A (ENSHCOG00000006324) ENSHCOG00000006192 haao (ENSHCOG00000006185) ENSHCOG00000006175 socs5b (ENSHCOG00000006168) ENSHCOG00000006164 rhoq (ENSHCOG00000006151) mxtx1 (ENSHCOG00000006137) ENSHCOG00000006124 ENSHCOG00000006113 #16 STK32C (ENSHCOG00000006092) #17 PWWP2B (ENSHCOG00000006074) #19 INPP5A (ENSHCOG00000006054) #20 nkx6.2 (ENSHCOG00000006009) #21 valopa (ENSHCOG00000005999) #22 ENSHCOG00000005988 #24 ENSHCOG00000005951 #25 ADGRA1 (ENSHCOG00000005931) #26 ENSHCOG00000005916 #28 vox (ENSHCOG00000005907) #29 ENSHCOG00000005890 #30 dntt (ENSHCOG00000005887) #31 ENSHCOG00000005860 #32 ENSHCOG00000005851 CCNJ (ENSHCOG00000005843) #33 BTAF1 (ENSHCOG00000005812) #34 cpeb3 (ENSHCOG00000005747) #35 marchf5 (ENSHCOG00000005713) #36 ENSHCOG00000005693 ide (ENSHCOG00000005681) #37 Pinecone sodierfish MODERN SPECIES 6 calm2a (ENSMMDG00005021233) si:ch211-93n23.7 (ENSMMDG00005021220) TTC7A (ENSMMDG00005021216) mcfd2 (ENSMMDG00005021213) ENSMMDG00005021212 socs5b (ENSMMDG00005021211) rhoq (ENSMMDG00005021207) mxtx1 (ENSMMDG00005021204) tmem254 (ENSMMDG00005021203) ENSMMDG00005021198 #16 STK32C (ENSMMDG00005021182) #17 LRRC27 (ENSMMDG00005021176) #18 PWWP2B (ENSMMDG00005021175) #19 INPP5A (ENSMMDG00005020875) #20 nkx6.2 (ENSMMDG00005020858) #21 valopa (ENSMMDG00005020837) #22 ENSMMDG00005020834 #24 ENSMMDG00005020830 #25 ADGRA1 (ENSMMDG00005020626) #26 ENSMMDG00005020597 #28 vox (ENSMMDG00005020596) #29 ENSMMDG00005020593 ##29 ENSMMDG00005020592 #30 dntt (ENSMMDG00005020116) #31 ENSMMDG00005020089 ENSMMDG00005020085 #32 ENSMMDG00005020082 CCNJ (ENSMMDG00005020076) #33 BTAF1 (ENSMMDG00005017880) #34 cpeb3 (ENSMMDG00005017732) #35 marchf5 (ENSMMDG00005017709) #36 Cod MODERN SPECIES 6 ENSGMOG00000006917 calm2a (ENSGMOG00000035072) ENSGMOG00000023737 TTC7A (ENSGMOG00000029809) ENSGMOG00000006867 mcfd2 (ENSGMOG00000026763) ENSGMOG00000006852 ENSGMOG00000029837 ENSGMOG00000023749 ENSGMOG00000001725 ENSGMOG00000001694 #16 STK32C (ENSGMOG00000001734) #17 ENSGMOG00000036145 PWWP2B (ENSGMOG00000001770) #19 nkx6.2 (ENSGMOG00000033363) #21 valopa (ENSGMOG00000009622) #22 ENSGMOG00000035697 #24 ENSGMOG00000017488 #24 ENSGMOG00000036116 ENSGMOG00000024400 ENSGMOG00000029682 ENSGMOG00000024120 ENSGMOG00000029967 ENSGMOG00000024618 ENSGMOG00000024349 #25 ENSGMOG00000033324 ENSGMOG00000026971 ADGRA1 (ENSGMOG00000035007) #26 ENSGMOG00000029976 #28 ENSGMOG00000035229 #28 vox (ENSGMOG00000007231) #29