Mammalia	ANCESTRAL SPECIES	7	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT01030000235172	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970 #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Theria	ANCESTRAL SPECIES	5	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT01030000235172	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT01030000235172	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35
Primates	ANCESTRAL SPECIES	1	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Simiiformes	ANCESTRAL SPECIES	1	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000155901.a.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.u #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Macaca	ANCESTRAL SPECIES	5	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00910000148059	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.u #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Macaca_a	ANCESTRAL SPECIES	5	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000156760 #15	ENSGT00390000000970.b.u #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00950000183087.A.a.b.b.g.e.b.b.b.b.a #24	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Rhesus	MODERN SPECIES	11	GPR149 (ENSMMUG00000056924) #7	MME (ENSMMUG00000006662) #8	STRIT1 (ENSMMUG00000060633) #9	PLCH1 (ENSMMUG00000018341) #10	C2H3orf33 (ENSMMUG00000049932) #11	SLC33A1 (ENSMMUG00000040085) #12	GMPS (ENSMMUG00000007324) #13	ENSMMUG00000062803 #14	KCNAB1 (ENSMMUG00000016968) #15	SSR3 (ENSMMUG00000016970) #16	TIPARP (ENSMMUG00000000366) #17	LEKR1 (ENSMMUG00000016495) #18	ENSMMUG00000058575 #19	CCNL1 (ENSMMUG00000016497) #20	VEPH1 (ENSMMUG00000022848) #21	PTX3 (ENSMMUG00000062582) #22	SLC66A1L (ENSMMUG00000012046) #23	ENSMMUG00000051699 #24	SHOX2 (ENSMMUG00000019030) #25	RSRC1 (ENSMMUG00000004956) #26	MLF1 (ENSMMUG00000004958) #27	GFM1 (ENSMMUG00000004961) #28	LXN (ENSMMUG00000004963) #29	RARRES1 (ENSMMUG00000014825) #30	MFSD1 (ENSMMUG00000023510) #31	SCHIP1 (ENSMMUG00000023081) #32	ENSMMUG00000064893 #33	IL12A (ENSMMUG00000023084) #34	C2H3orf80 (ENSMMUG00000059508) #35	IFT80 (ENSMMUG00000017282) #36	SMC4 (ENSMMUG00000017291) #37
Crab-eating macaque	MODERN SPECIES	11	GPR149 (ENSMFAG00000030860) #7	MME (ENSMFAG00000039633) #8	STRIT1 (ENSMFAG00000039645) #9	PLCH1 (ENSMFAG00000042166) #10	ENSMFAG00000039668	C3orf33 (ENSMFAG00000004239) #11	SLC33A1 (ENSMFAG00000057969) #12	GMPS (ENSMFAG00000039350) #13	ENSMFAG00000035446	KCNAB1 (ENSMFAG00000032077) #15	SSR3 (ENSMFAG00000065033) #16	TIPARP (ENSMFAG00000040611) #17	LEKR1 (ENSMFAG00000032575) #18	CCNL1 (ENSMFAG00000030104) #20	VEPH1 (ENSMFAG00000043410) #21	PTX3 (ENSMFAG00000040863) #22	ENSMFAG00000002259 #23	ENSMFAG00000011761 #24	SHOX2 (ENSMFAG00000029366) #25	RSRC1 (ENSMFAG00000006023) #26	MLF1 (ENSMFAG00000032723) #27	GFM1 (ENSMFAG00000035731) #28	LXN (ENSMFAG00000038453) #29	RARRES1 (ENSMFAG00000023184) #30	MFSD1 (ENSMFAG00000041451) #31	IQCJ (ENSMFAG00000045301)	SCHIP1 (ENSMFAG00000002886) #32	IL12A (ENSMFAG00000032832) #34	ENSMFAG00000063065 #35	IFT80 (ENSMFAG00000044919) #36	SMC4 (ENSMFAG00000003430) #37
Pig-tailed macaque	MODERN SPECIES	147				STRIT1 (ENSMNEG00000034812) #9	PLCH1 (ENSMNEG00000041537) #10	C3orf33 (ENSMNEG00000039740) #11	SLC33A1 (ENSMNEG00000041243) #12	GMPS (ENSMNEG00000029760) #13	ENSMNEG00000037898	ENSMNEG00000038579	KCNAB1 (ENSMNEG00000030568) #15	SSR3 (ENSMNEG00000043849) #16	TIPARP (ENSMNEG00000041085) #17	LEKR1 (ENSMNEG00000032090) #18	CCNL1 (ENSMNEG00000042991) #20	PTX3 (ENSMNEG00000032162) #22	VEPH1 (ENSMNEG00000032781) #21	ENSMNEG00000013326 #23	SHOX2 (ENSMNEG00000044817) #25	RSRC1 (ENSMNEG00000037212) #26	MLF1 (ENSMNEG00000037020) #27	LXN (ENSMNEG00000031431) #29	GFM1 (ENSMNEG00000033245) #28	RARRES1 (ENSMNEG00000039722) #30	MFSD1 (ENSMNEG00000040690) #31	IQCJ (ENSMNEG00000033302)	ENSMNEG00000039573 #32	IL12A (ENSMNEG00000044033) #34	C3orf80 (ENSMNEG00000009440) #35	IFT80 (ENSMNEG00000031375) #36	SMC4 (ENSMNEG00000033241) #37
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00910000148059	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.u #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660.e #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00950000183762	ENSGT00960000187632.b.a.a.b #33	ENSGT00390000011127 #32	ENSGT00390000016906 #34
Olive baboon	MODERN SPECIES	11	DHX36 (ENSPANG00000007914)	GPR149 (ENSPANG00000010538) #7	MME (ENSPANG00000005579) #8	STRIT1 (ENSPANG00000034540) #9	ENSPANG00000034846	PLCH1 (ENSPANG00000020169) #10	C3orf33 (ENSPANG00000011556) #11	SLC33A1 (ENSPANG00000015696) #12	GMPS (ENSPANG00000017625) #13	ENSPANG00000029453	KCNAB1 (ENSPANG00000015726) #15	ENSPANG00000006131 #16	TIPARP (ENSPANG00000007235) #17	LEKR1 (ENSPANG00000006077) #18	CCNL1 (ENSPANG00000015798) #20	PTX3 (ENSPANG00000015656) #22	VEPH1 (ENSPANG00000010193) #21	ENSPANG00000006508 #23	ENSPANG00000038418	ENSPANG00000037645	ENSPANG00000008659 ##24	SHOX2 (ENSPANG00000008663) #25	RSRC1 (ENSPANG00000013402) #26	MLF1 (ENSPANG00000017579) #27	LXN (ENSPANG00000013296) #29	GFM1 (ENSPANG00000016512) #28	RARRES1 (ENSPANG00000006228) #30	ENSPANG00000047983	MFSD1 (ENSPANG00000002800) #31	ENSPANG00000043665	IQCJ (ENSPANG00000033072)
Cercopithecinae_d	ANCESTRAL SPECIES	81	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00910000148059	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.u #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660.e #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00950000183762	ENSGT00950000183010.a.a.a.b.b.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35
Drill	MODERN SPECIES	581																PTX3 (ENSMLEG00000004048) #22	ENSMLEG00000009467 #21	ENSMLEG00000033295 #23
Sooty mangabey	MODERN SPECIES	99	STRIT1 (ENSCATG00000043299) #9	ENSCATG00000045341	PLCH1 (ENSCATG00000043865) #10	C3orf33 (ENSCATG00000030263) #11	SLC33A1 (ENSCATG00000034638) #12	GMPS (ENSCATG00000031121) #13	ENSCATG00000022003	ENSCATG00000039951	KCNAB1 (ENSCATG00000015065) #15	ENSCATG00000037986	SSR3 (ENSCATG00000044932) #16	TIPARP (ENSCATG00000030375) #17	LEKR1 (ENSCATG00000045022) #18	CCNL1 (ENSCATG00000035386) #20	VEPH1 (ENSCATG00000029319) #21	PTX3 (ENSCATG00000039761) #22	ENSCATG00000011015 #23	SHOX2 (ENSCATG00000036242) #25	RSRC1 (ENSCATG00000036643) #26	MLF1 (ENSCATG00000041224) #27	GFM1 (ENSCATG00000037622) #28	LXN (ENSCATG00000044907) #29	RARRES1 (ENSCATG00000041879) #30	MFSD1 (ENSCATG00000032129) #31	IQCJ (ENSCATG00000036638)	ENSCATG00000021185 #32	ENSCATG00000016311	IL12A (ENSCATG00000041528) #34	C3orf80 (ENSCATG00000016242) #35	IFT80 (ENSCATG00000009307) #36	SMC4 (ENSCATG00000023485) #37
Vervet Monkey	MODERN SPECIES	6	RAP2B (ENSCSAG00000018898)	ARHGEF26 (ENSCSAG00000011952)	DHX36 (ENSCSAG00000011962)	GPR149 (ENSCSAG00000011972) #7	MME (ENSCSAG00000011987) #8	ENSCSAG00000012000 #10	C3orf33 (ENSCSAG00000012008) #11	SLC33A1 (ENSCSAG00000012012) #12	GMPS (ENSCSAG00000012022) #13	KCNAB1 (ENSCSAG00000012031) #15	ENSCSAG00000012048 #16	TIPARP (ENSCSAG00000012060) #17	ENSCSAG00000012064	LEKR1 (ENSCSAG00000012071) #18	CCNL1 (ENSCSAG00000012077) #20	PTX3 (ENSCSAG00000012090) #22	VEPH1 (ENSCSAG00000012098) #21	ENSCSAG00000012112 #23	SHOX2 (ENSCSAG00000012131) #25	RSRC1 (ENSCSAG00000012145) #26	MLF1 (ENSCSAG00000012151) #27	LXN (ENSCSAG00000012154) #29	GFM1 (ENSCSAG00000012162) #28	RARRES1 (ENSCSAG00000012175) #30	MFSD1 (ENSCSAG00000012186) #31	ENSCSAG00000018896	SCHIP1 (ENSCSAG00000012193) #32	IL12A (ENSCSAG00000012218) #34	C3orf80 (ENSCSAG00000018894) #35	IFT80 (ENSCSAG00000012233) #36	SMC4 (ENSCSAG00000012248) #37
Rhinopithecus	ANCESTRAL SPECIES	257						ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.p.a #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00950000183762
Golden snub-nosed monkey	MODERN SPECIES	1252			ENSRROG00000033946	C3orf33 (ENSRROG00000033959) #11	ENSRROG00000036896	SLC33A1 (ENSRROG00000040669) #12	GMPS (ENSRROG00000035915) #13	ENSRROG00000002902	KCNAB1 (ENSRROG00000003220) #15	ENSRROG00000030984	SSR3 (ENSRROG00000037341) #16	TIPARP (ENSRROG00000041667) #17	LEKR1 (ENSRROG00000044541) #18	CCNL1 (ENSRROG00000034433) #20	VEPH1 (ENSRROG00000039187) #21	PTX3 (ENSRROG00000035614) #22
Black snub-nosed monkey	MODERN SPECIES	1014																PTX3 (ENSRBIG00000024992) #22	ENSRBIG00000038256 #21	ENSRBIG00000024419 #23	SHOX2 (ENSRBIG00000044489) #25	RSRC1 (ENSRBIG00000032161) #26	ENSRBIG00000024644	MLF1 (ENSRBIG00000038204) #27	GFM1 (ENSRBIG00000031363) #28	LXN (ENSRBIG00000040813) #29	RARRES1 (ENSRBIG00000041313) #30	MFSD1 (ENSRBIG00000044000) #31	IQCJ (ENSRBIG00000039280)	ENSRBIG00000006107	ENSRBIG00000039316	CMAS (ENSRBIG00000029767)	ST8SIA1 (ENSRBIG00000032474)
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00940000155901.a.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00390000017288.d	ENSGT00940000155058.e.b	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Hominidae	ANCESTRAL SPECIES	2	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000155901.a.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000155901.a.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Pan	ANCESTRAL SPECIES	2	ENSGT00940000166505 #9	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000154891.g.a.b.a.a	ENSGT00390000008647.e.a.a.a.b.a.a	ENSGT00390000017288.d	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000154281.m.b.a.a.b.a	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Chimpanzee	MODERN SPECIES	16	PLCH1 (ENSPTRG00000015551) #10	C3H3orf33 (ENSPTRG00000015553) #11	SLC33A1 (ENSPTRG00000015554) #12	GMPS (ENSPTRG00000015555) #13	ENSPTRG00000032585	ENSPTRG00000041304	ENSPTRG00000052355	ENSPTRG00000051749	KCNAB1 (ENSPTRG00000044809) #15	SSR3 (ENSPTRG00000048398) #16	TIPARP (ENSPTRG00000015561) #17	ENSPTRG00000040050	LEKR1 (ENSPTRG00000024220) #18	CCNL1 (ENSPTRG00000015563) #20	VEPH1 (ENSPTRG00000022665) #21	PTX3 (ENSPTRG00000015565) #22	SLC66A1L (ENSPTRG00000015566) #23	SHOX2 (ENSPTRG00000023041) #25	RSRC1 (ENSPTRG00000043498) #26	MLF1 (ENSPTRG00000015569) #27	GFM1 (ENSPTRG00000015570) #28	LXN (ENSPTRG00000015571) #29	RARRES1 (ENSPTRG00000015572) #30	MFSD1 (ENSPTRG00000022830) #31	IQCJ (ENSPTRG00000033877)	SCHIP1 (ENSPTRG00000015575) #32	IL12A (ENSPTRG00000015576) #34	ENSPTRG00000005970	C3H3orf80 (ENSPTRG00000051547) #35	IFT80 (ENSPTRG00000015578) #36	SMC4 (ENSPTRG00000015579) #37
Bonobo	MODERN SPECIES	16	ENSPPAG00000037955	PLCH1 (ENSPPAG00000015015) #10	C3orf33 (ENSPPAG00000040302) #11	SLC33A1 (ENSPPAG00000028834) #12	GMPS (ENSPPAG00000042787) #13	ENSPPAG00000031281	ENSPPAG00000008889	ENSPPAG00000031413	KCNAB1 (ENSPPAG00000030046) #15	SSR3 (ENSPPAG00000034664) #16	TIPARP (ENSPPAG00000029528) #17	ENSPPAG00000033599	LEKR1 (ENSPPAG00000028869) #18	CCNL1 (ENSPPAG00000033713) #20	VEPH1 (ENSPPAG00000034788) #21	PTX3 (ENSPPAG00000035181) #22	SHOX2 (ENSPPAG00000022372) #25	RSRC1 (ENSPPAG00000034990) #26	MLF1 (ENSPPAG00000027183) #27	GFM1 (ENSPPAG00000033881) #28	LXN (ENSPPAG00000040496) #29	ENSPPAG00000043634 #30	MFSD1 (ENSPPAG00000028522) #31	ENSPPAG00000044100	ENSPPAG00000030192 #32	IL12A (ENSPPAG00000038366) #34	C3orf80 (ENSPPAG00000028260) #35	IFT80 (ENSPPAG00000041744) #36	SMC4 (ENSPPAG00000042464) #37	ENSPPAG00000030473	KPNA4 (ENSPPAG00000003969)
Human	MODERN SPECIES	15	ARHGEF26 (ENSG00000114790)	DHX36 (ENSG00000174953)	GPR149 (ENSG00000174948) #7	MME (ENSG00000196549) #8	STRIT1 (ENSG00000240045) #9	PLCH1 (ENSG00000114805) #10	C3orf33 (ENSG00000174928) #11	SLC33A1 (ENSG00000169359) #12	GMPS (ENSG00000163655) #13	KCNAB1 (ENSG00000169282) #15	SSR3 (ENSG00000114850) #16	TIPARP (ENSG00000163659) #17	LEKR1 (ENSG00000197980) #18	CCNL1 (ENSG00000163660) #20	VEPH1 (ENSG00000197415) #21	PTX3 (ENSG00000163661) #22	SHOX2 (ENSG00000168779) #25	RSRC1 (ENSG00000174891) #26	MLF1 (ENSG00000178053) #27	GFM1 (ENSG00000168827) #28	LXN (ENSG00000079257) #29	RARRES1 (ENSG00000118849) #30	MFSD1 (ENSG00000118855) #31	IQCJ-SCHIP1 (ENSG00000283154)	IQCJ (ENSG00000214216)	SCHIP1 (ENSG00000151967) #32	IL12A (ENSG00000168811) #34	C3orf80 (ENSG00000180044) #35	IFT80 (ENSG00000068885) #36	SMC4 (ENSG00000113810) #37	TRIM59 (ENSG00000213186)
Gorilla	MODERN SPECIES	16	PLCH1 (ENSGGOG00000009552) #10	ENSGGOG00000039947	ENSGGOG00000038553	C3orf33 (ENSGGOG00000024967) #11	SLC33A1 (ENSGGOG00000013029) #12	GMPS (ENSGGOG00000017082) #13	ENSGGOG00000041405	ENSGGOG00000024916	KCNAB1 (ENSGGOG00000007488) #15	ENSGGOG00000023817	SSR3 (ENSGGOG00000024038) #16	TIPARP (ENSGGOG00000026270) #17	LEKR1 (ENSGGOG00000025297) #18	CCNL1 (ENSGGOG00000006249) #20	VEPH1 (ENSGGOG00000034894) #21	PTX3 (ENSGGOG00000015338) #22	ENSGGOG00000028322 #23	SHOX2 (ENSGGOG00000011637) #25	RSRC1 (ENSGGOG00000042322) #26	MLF1 (ENSGGOG00000022629) #27	GFM1 (ENSGGOG00000003085) #28	LXN (ENSGGOG00000003092) #29	RARRES1 (ENSGGOG00000011629) #30	MFSD1 (ENSGGOG00000024126) #31	ENSGGOG00000003898	IQCJ-SCHIP1 (ENSGGOG00000009987) #32	IL12A (ENSGGOG00000006828) #34	ENSGGOG00000037834	C3orf80 (ENSGGOG00000043723) #35	IFT80 (ENSGGOG00000039200) #36	SMC4 (ENSGGOG00000013735) #37
Orangutan	MODERN SPECIES	16	DHX36 (ENSPPYG00000014222)	GPR149 (ENSPPYG00000014223) #7	MME (ENSPPYG00000014224) #8	STRIT1 (ENSPPYG00000039457) #9	PLCH1 (ENSPPYG00000014225) #10	C3orf33 (ENSPPYG00000014227) #11	SLC33A1 (ENSPPYG00000014228) #12	GMPS (ENSPPYG00000014229) #13	KCNAB1 (ENSPPYG00000014232) #15	SSR3 (ENSPPYG00000014233) #16	TIPARP (ENSPPYG00000014234) #17	ENSPPYG00000032921	LEKR1 (ENSPPYG00000014236) #18	CCNL1 (ENSPPYG00000014237) #20	VEPH1 (ENSPPYG00000014238) #21	PTX3 (ENSPPYG00000014239) #22	ENSPPYG00000040849 #23	SHOX2 (ENSPPYG00000032262) #25	RSRC1 (ENSPPYG00000014242) #26	MLF1 (ENSPPYG00000037889) #27	GFM1 (ENSPPYG00000014244) #28	LXN (ENSPPYG00000014245) #29	RARRES1 (ENSPPYG00000014246) #30	MFSD1 (ENSPPYG00000014247) #31	ENSPPYG00000014249	ENSPPYG00000014252 #32	IL12A (ENSPPYG00000014253) #34	C3orf80 (ENSPPYG00000014254) #35	IFT80 (ENSPPYG00000014255) #36	SMC4 (ENSPPYG00000014256) #37	TRIM59 (ENSPPYG00000034374)
Gibbon	MODERN SPECIES	1	STRIT1 (ENSNLEG00000028242) #9	ENSNLEG00000030011	PLCH1 (ENSNLEG00000003776) #10	C3orf33 (ENSNLEG00000032487) #11	SLC33A1 (ENSNLEG00000031523) #12	GMPS (ENSNLEG00000003856) #13	ENSNLEG00000034563	KCNAB1 (ENSNLEG00000028736) #15	ENSNLEG00000029311	SSR3 (ENSNLEG00000003961) #16	TIPARP (ENSNLEG00000003977) #17	ENSNLEG00000028927	LEKR1 (ENSNLEG00000003993) #18	CCNL1 (ENSNLEG00000003998) #20	VEPH1 (ENSNLEG00000004031) #21	PTX3 (ENSNLEG00000004099) #22	ENSNLEG00000004110 #23	SHOX2 (ENSNLEG00000004124) #25	RSRC1 (ENSNLEG00000004137) #26	MLF1 (ENSNLEG00000004153) #27	GFM1 (ENSNLEG00000004176) #28	LXN (ENSNLEG00000033843) #29	ENSNLEG00000004243 #30	MFSD1 (ENSNLEG00000004249) #31	ENSNLEG00000030545	ENSNLEG00000004345 #32	ENSNLEG00000004371 #34	C3orf80 (ENSNLEG00000034275) #35	IFT80 (ENSNLEG00000004380) #36	SMC4 (ENSNLEG00000004457) #37	ENSNLEG00000029782
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591.d #13	ENSGT00940000156760 #15	ENSGT00390000000970.b.n.a.a #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251.b #26	ENSGT00730000111251.a #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00910000145701.a	ENSGT00390000011127 #32	ENSGT00390000016906 #34
Cebidae	ANCESTRAL SPECIES	22	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591.d #13	ENSGT00940000156760 #15	ENSGT00390000000970.b.n.a.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251.b #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00910000145701.a	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00440000033499 #36
Marmoset	MODERN SPECIES	8	STRIT1 (ENSCJAG00000042341) #9	ENSCJAG00000073626	ENSCJAG00000072151	ENSCJAG00000078846	PLCH1 (ENSCJAG00000000917) #10	C3orf33 (ENSCJAG00000000910) #11	SLC33A1 (ENSCJAG00000000902) #12	GMPS (ENSCJAG00000000863) #13	ENSCJAG00000001100	ENSCJAG00000065233	KCNAB1 (ENSCJAG00000004577) #15	ENSCJAG00000045770 #16	TIPARP (ENSCJAG00000004657) #17	LEKR1 (ENSCJAG00000004676) #18	CCNL1 (ENSCJAG00000004692) #20	PTX3 (ENSCJAG00000004771) #22	VEPH1 (ENSCJAG00000004747) #21	ENSCJAG00000043693 #23	ENSCJAG00000022309	ENSCJAG00000084466	SHOX2 (ENSCJAG00000073951) #25	ENSCJAG00000072338	RSRC1 (ENSCJAG00000036696) #26	MLF1 (ENSCJAG00000000352) #27	LXN (ENSCJAG00000000386) #29	GFM1 (ENSCJAG00000000363) #28	RARRES1 (ENSCJAG00000000389) #30	ENSCJAG00000055310	MFSD1 (ENSCJAG00000000395) #31	IQCJ (ENSCJAG00000000412)	ENSCJAG00000071072
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591.d #13	ENSGT00940000156760 #15	ENSGT00390000000970.b.n.a.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000163939 #23	ENSGT00940000154287.b #25	ENSGT00730000111251.b #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00910000145701.a	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00440000033499 #36	ENSGT00900000141094.g #37
Bolivian squirrel monkey	MODERN SPECIES	54	ENSSBOG00000014186	GPR149 (ENSSBOG00000019206) #7	MME (ENSSBOG00000016144) #8	ENSSBOG00000028023	STRIT1 (ENSSBOG00000010194) #9	ENSSBOG00000005590	PLCH1 (ENSSBOG00000035699) #10	C3orf33 (ENSSBOG00000022745) #11	SLC33A1 (ENSSBOG00000022127) #12	GMPS (ENSSBOG00000033046) #13	KCNAB1 (ENSSBOG00000022593) #15	ENSSBOG00000036066 #16	TIPARP (ENSSBOG00000030511) #17	LEKR1 (ENSSBOG00000035709) #18	CCNL1 (ENSSBOG00000035767) #20	PTX3 (ENSSBOG00000030163) #22	VEPH1 (ENSSBOG00000027631) #21	ENSSBOG00000021272 #23	SHOX2 (ENSSBOG00000035166) #25	RSRC1 (ENSSBOG00000027990) #26	MLF1 (ENSSBOG00000024403) #27	LXN (ENSSBOG00000034211) #29	GFM1 (ENSSBOG00000023252) #28	RARRES1 (ENSSBOG00000032081) #30	ENSSBOG00000026376	MFSD1 (ENSSBOG00000031153) #31	IQCJ (ENSSBOG00000013244)	ENSSBOG00000031233	ENSSBOG00000021868 #32	IL12A (ENSSBOG00000034138) #34	ENSSBOG00000032637
Capuchin	MODERN SPECIES	270														LEKR1 (ENSCCAG00000024625) #18	CCNL1 (ENSCCAG00000004737) #20	PTX3 (ENSCCAG00000017300) #22	VEPH1 (ENSCCAG00000024053) #21	ENSCCAG00000000022	SHOX2 (ENSCCAG00000026119) #25	RSRC1 (ENSCCAG00000032077) #26	MLF1 (ENSCCAG00000028078) #27	LXN (ENSCCAG00000020030) #29	GFM1 (ENSCCAG00000025561) #28	RARRES1 (ENSCCAG00000032647) #30	MFSD1 (ENSCCAG00000038095) #31	IQCJ (ENSCCAG00000030767)	ENSCCAG00000024648	ENSCCAG00000028195 #32	IL12A (ENSCCAG00000034876) #34
Mas night monkey	MODERN SPECIES	400				STRIT1 (ENSANAG00000035345) #9	ENSANAG00000026678	PLCH1 (ENSANAG00000037829) #10	C3orf33 (ENSANAG00000037818) #11	SLC33A1 (ENSANAG00000036331) #12	ENSANAG00000036394 #13	KCNAB1 (ENSANAG00000032104) #15	ENSANAG00000025983 #16	TIPARP (ENSANAG00000036588) #17	LEKR1 (ENSANAG00000025264) #18	CCNL1 (ENSANAG00000035618) #20	ENSANAG00000037179	PTX3 (ENSANAG00000021902) #22	VEPH1 (ENSANAG00000020731) #21	ENSANAG00000036049	SHOX2 (ENSANAG00000013863) #25	ENSANAG00000029278 #26	MLF1 (ENSANAG00000026540) #27	LXN (ENSANAG00000024771) #29	GFM1 (ENSANAG00000035983) #28	RARRES1 (ENSANAG00000027312) #30	MFSD1 (ENSANAG00000024294) #31	ENSANAG00000025825	ENSANAG00000021265	ENSANAG00000021216	ENSANAG00000018582	ENSANAG00000000056 #32	IL12A (ENSANAG00000028740) #34
Tarsier	MODERN SPECIES	6829																PTX3 (ENSTSYG00000006774) #22	ENSTSYG00000025715 #21
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Lemuriformes	ANCESTRAL SPECIES	30	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Mouse lemur	MODERN SPECIES		MECOM (ENSMICG00000049200)	GOLIM4 (ENSMICG00000048403)	ENSMICG00000048463	SERPINI1 (ENSMICG00000049293)	ENSMICG00000049445	WDR49 (ENSMICG00000048888)	SERPINI2 (ENSMICG00000049123)	ZBBX (ENSMICG00000049374)	ENSMICG00000049058	BCHE (ENSMICG00000049075)	SLITRK3 (ENSMICG00000049548)	SI (ENSMICG00000049323)	ENSMICG00000048943	ENSMICG00000048227 #18	CCNL1 (ENSMICG00000049517) #20	PTX3 (ENSMICG00000049341) #22	VEPH1 (ENSMICG00000049487) #21	ENSMICG00000049190	ENSMICG00000049353 #23	ENSMICG00000049516	SHOX2 (ENSMICG00000049132) #25	ENSMICG00000049450	ENSMICG00000048785 #26	MLF1 (ENSMICG00000048928) #27	LXN (ENSMICG00000049388) #29	GFM1 (ENSMICG00000049086) #28	RARRES1 (ENSMICG00000049120) #30	MFSD1 (ENSMICG00000049472) #31	IQCJ (ENSMICG00000049562)	ENSMICG00000049157 #32	IL12A (ENSMICG00000049316) #34
Lemuriformes_a	ANCESTRAL SPECIES	77	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34
Coquerels sifaka	MODERN SPECIES	274	ENSPCOG00000022566	ARHGEF26 (ENSPCOG00000012536)	ENSPCOG00000011695	GPR149 (ENSPCOG00000027399) #7	MME (ENSPCOG00000013543) #8	STRIT1 (ENSPCOG00000015379) #9	PLCH1 (ENSPCOG00000028591) #10	C3orf33 (ENSPCOG00000007724) #11	SLC33A1 (ENSPCOG00000021978) #12	GMPS (ENSPCOG00000024460) #13	KCNAB1 (ENSPCOG00000013343) #15	SSR3 (ENSPCOG00000017371) #16	TIPARP (ENSPCOG00000018471) #17	LEKR1 (ENSPCOG00000008154) #18	CCNL1 (ENSPCOG00000015763) #20	PTX3 (ENSPCOG00000024857) #22	VEPH1 (ENSPCOG00000018922) #21	ENSPCOG00000001436	SHOX2 (ENSPCOG00000028731) #25	RSRC1 (ENSPCOG00000024048) #26	MLF1 (ENSPCOG00000024606) #27	LXN (ENSPCOG00000027480) #29	GFM1 (ENSPCOG00000022259) #28	RARRES1 (ENSPCOG00000028694) #30	MFSD1 (ENSPCOG00000017381) #31	IQCJ (ENSPCOG00000015167)	ENSPCOG00000002157 #32	IL12A (ENSPCOG00000019947) #34
Greater bamboo lemur	MODERN SPECIES	448	DHX36 (ENSPSMG00000003457)	GPR149 (ENSPSMG00000003410) #7	MME (ENSPSMG00000003300) #8	STRIT1 (ENSPSMG00000003191) #9	PLCH1 (ENSPSMG00000003152) #10	C3orf33 (ENSPSMG00000003083) #11	ENSPSMG00000003046 #12	GMPS (ENSPSMG00000003004) #13	ENSPSMG00000002894	KCNAB1 (ENSPSMG00000002464) #15	SSR3 (ENSPSMG00000002232) #16	TIPARP (ENSPSMG00000002213) #17	ENSPSMG00000002207	LEKR1 (ENSPSMG00000002201) #18	CCNL1 (ENSPSMG00000002156) #20	PTX3 (ENSPSMG00000002124) #22	VEPH1 (ENSPSMG00000002055) #21	ENSPSMG00000002005	SHOX2 (ENSPSMG00000001995) #25
Bushbaby	MODERN SPECIES	191	ARHGEF26 (ENSOGAG00000011252)	DHX36 (ENSOGAG00000011256)	GPR149 (ENSOGAG00000011263) #7	MME (ENSOGAG00000010918) #8	PLCH1 (ENSOGAG00000031120) #10	C3orf33 (ENSOGAG00000014996) #11	SLC33A1 (ENSOGAG00000008518) #12	GMPS (ENSOGAG00000008523) #13	ENSOGAG00000028827	KCNAB1 (ENSOGAG00000010587) #15	SSR3 (ENSOGAG00000010589) #16	TIPARP (ENSOGAG00000003455) #17	ENSOGAG00000016012 #18	CCNL1 (ENSOGAG00000011592) #20	VEPH1 (ENSOGAG00000007526) #21	PTX3 (ENSOGAG00000007529) #22	SHOX2 (ENSOGAG00000008288) #25	ENSOGAG00000008290	ENSOGAG00000025716	MLF1 (ENSOGAG00000008294) #27	GFM1 (ENSOGAG00000008298) #28	RARRES1 (ENSOGAG00000008313) #30	MFSD1 (ENSOGAG00000014711) #31	ENSOGAG00000026335	ENSOGAG00000009312 #32	IL12A (ENSOGAG00000013000) #34	ENSOGAG00000025939	IFT80 (ENSOGAG00000010032) #36	SMC4 (ENSOGAG00000010034) #37	ENSOGAG00000026112	GRID2 (ENSOGAG00000004937)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Tree shrew	MODERN SPECIES	3128														CCNL1 (ENSTBEG00000007980) #20	VEPH1 (ENSTBEG00000008938) #21	PTX3 (ENSTBEG00000002138) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT01080000259023	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Rabbit	MODERN SPECIES	5	ENSOCUG00000029864	PLCH1 (ENSOCUG00000009260) #10	C3orf33 (ENSOCUG00000017756) #11	SLC33A1 (ENSOCUG00000001478) #12	GMPS (ENSOCUG00000001480) #13	ENSOCUG00000002317	ENSOCUG00000002314	KCNAB1 (ENSOCUG00000007885) #15	ENSOCUG00000011704	SSR3 (ENSOCUG00000007898) #16	TIPARP (ENSOCUG00000014910) #17	LEKR1 (ENSOCUG00000011073) #18	ENSOCUG00000034465	CCNL1 (ENSOCUG00000003451) #20	VEPH1 (ENSOCUG00000010133) #21	PTX3 (ENSOCUG00000010142) #22	ENSOCUG00000035608	SHOX2 (ENSOCUG00000029123) #25	RSRC1 (ENSOCUG00000030494) #26	MLF1 (ENSOCUG00000013549) #27	GFM1 (ENSOCUG00000013561) #28	LXN (ENSOCUG00000024041) #29	RARRES1 (ENSOCUG00000029263) #30	ENSOCUG00000026179	MFSD1 (ENSOCUG00000001272) #31	ENSOCUG00000023648	IQCJ (ENSOCUG00000022809)	ENSOCUG00000011278 #32	IL12A (ENSOCUG00000010149) #34	ENSOCUG00000031459	ENSOCUG00000033720
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Myomorpha	ANCESTRAL SPECIES	38	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Muroidea	ANCESTRAL SPECIES	44	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Murinae	ANCESTRAL SPECIES	5	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j.d	ENSGT00940000160473.j.c.a	ENSGT00940000160473.j.c.b	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Mus	ANCESTRAL SPECIES	7	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j.d.a	ENSGT00940000160473.j.c.a	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j.d.a	ENSGT00940000160473.j.c.a	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j.d.a	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Mouse	MODERN SPECIES	12	Gmps (ENSMUSG00000027823) #13	Vmn2r1 (ENSMUSG00000027824)	Vmn2r2 (ENSMUSG00000043897)	Vmn2r3 (ENSMUSG00000091572)	Vmn2r128 (ENSMUSG00000091967)	Vmn2r4 (ENSMUSG00000092049)	Vmn2r5 (ENSMUSG00000068999)	Vmn2r6 (ENSMUSG00000090581)	Vmn2r7 (ENSMUSG00000062200)	Kcnab1 (ENSMUSG00000027827) #15	Ssr3 (ENSMUSG00000027828) #16	Tiparp (ENSMUSG00000034640) #17	Lekr1 (ENSMUSG00000074579) #18	Ccnl1 (ENSMUSG00000027829) #20	Veph1 (ENSMUSG00000027831) #21	Ptx3 (ENSMUSG00000027832) #22	Shox2 (ENSMUSG00000027833) #25	Rsrc1 (ENSMUSG00000034544) #26	Mlf1 (ENSMUSG00000048416) #27	Gfm1 (ENSMUSG00000027774) #28	Lxn (ENSMUSG00000047557) #29	Rarres1 (ENSMUSG00000049404) #30	Mfsd1 (ENSMUSG00000027775) #31	Iqcj (ENSMUSG00000051777)	Iqschfp (ENSMUSG00000102422)	Schip1 (ENSMUSG00000027777) #32	Il12a (ENSMUSG00000027776) #34	1110032F04Rik (ENSMUSG00000046999) #35	Ift80 (ENSMUSG00000027778) #36	Smc4 (ENSMUSG00000034349) #37	Trim59 (ENSMUSG00000034317)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j.d.a	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Steppe mouse	MODERN SPECIES	3367																Ptx3 (ENSMSIG00000025194) #22	ENSMSIG00000025177	Shox2 (ENSMSIG00000025154) #25	Rsrc1 (ENSMSIG00000025037) #26	Mlf1 (ENSMSIG00000025018) #27	Lxn (ENSMSIG00000025005) #29	Gfm1 (ENSMSIG00000024997) #28	Rarres1 (ENSMSIG00000024983) #30	Mfsd1 (ENSMSIG00000024948) #31	ENSMSIG00000024939	ENSMSIG00000024873	ENSMSIG00000024849	ENSMSIG00000024823	Schip1 (ENSMSIG00000024744) #32	Il12a (ENSMSIG00000024713) #34	ENSMSIG00000024708
spretus	MODERN SPECIES	12	Plch1 (MGP_SPRETEiJ_G0025975) #10	E130311K13Rik (MGP_SPRETEiJ_G0025976) #11	Slc33a1 (MGP_SPRETEiJ_G0025977) #12	MGP_SPRETEiJ_G0025978 #13	MGP_SPRETEiJ_G0025979	MGP_SPRETEiJ_G0025980	MGP_SPRETEiJ_G0025981	MGP_SPRETEiJ_G0025982	MGP_SPRETEiJ_G0025983	Kcnab1 (MGP_SPRETEiJ_G0025984) #15	Ssr3 (MGP_SPRETEiJ_G0025985) #16	Tiparp (MGP_SPRETEiJ_G0025986) #17	MGP_SPRETEiJ_G0025987	Ccnl1 (MGP_SPRETEiJ_G0025988) #20	Veph1 (MGP_SPRETEiJ_G0025989) #21	Ptx3 (MGP_SPRETEiJ_G0025990) #22	Shox2 (MGP_SPRETEiJ_G0025991) #25	Rsrc1 (MGP_SPRETEiJ_G0025992) #26	Mlf1 (MGP_SPRETEiJ_G0025993) #27	Gfm1 (MGP_SPRETEiJ_G0025994) #28	Lxn (MGP_SPRETEiJ_G0025995) #29	Rarres1 (MGP_SPRETEiJ_G0025996) #30	Mfsd1 (MGP_SPRETEiJ_G0025997) #31	Iqcj (MGP_SPRETEiJ_G0025998)	MGP_SPRETEiJ_G0025999 #32	MGP_SPRETEiJ_G0026000 #32	Il12a (MGP_SPRETEiJ_G0026001) #34	MGP_SPRETEiJ_G0026002	1110032F04Rik (MGP_SPRETEiJ_G0026003) #35	Ift80 (MGP_SPRETEiJ_G0026004) #36	Smc4 (MGP_SPRETEiJ_G0026005) #37
Ryukyu mouse	MODERN SPECIES	12	Gpr149 (MGP_CAROLIEiJ_G0025033) #7	Mme (MGP_CAROLIEiJ_G0025034) #8	Plch1 (MGP_CAROLIEiJ_G0025035) #10	MGP_CAROLIEiJ_G0025036 #11	Slc33a1 (MGP_CAROLIEiJ_G0025037) #12	Gmps (MGP_CAROLIEiJ_G0025038) #13	MGP_CAROLIEiJ_G0025039	Vmn2r1 (MGP_CAROLIEiJ_G0025040)	MGP_CAROLIEiJ_G0025041	Kcnab1 (MGP_CAROLIEiJ_G0025042) #15	Ssr3 (MGP_CAROLIEiJ_G0025043) #16	Tiparp (MGP_CAROLIEiJ_G0025044) #17	MGP_CAROLIEiJ_G0025045	Ccnl1 (MGP_CAROLIEiJ_G0025046) #20	Veph1 (MGP_CAROLIEiJ_G0025047) #21	Ptx3 (MGP_CAROLIEiJ_G0025048) #22	Shox2 (MGP_CAROLIEiJ_G0025049) #25	Rsrc1 (MGP_CAROLIEiJ_G0025050) #26	Mlf1 (MGP_CAROLIEiJ_G0025051) #27	Gfm1 (MGP_CAROLIEiJ_G0025052) #28	Lxn (MGP_CAROLIEiJ_G0025053) #29	Rarres1 (MGP_CAROLIEiJ_G0025054) #30	Mfsd1 (MGP_CAROLIEiJ_G0025055) #31	Iqcj (MGP_CAROLIEiJ_G0025056)	MGP_CAROLIEiJ_G0025057 #32	MGP_CAROLIEiJ_G0025058 #32	Il12a (MGP_CAROLIEiJ_G0025059) #34	MGP_CAROLIEiJ_G0025060	1110032F04Rik (MGP_CAROLIEiJ_G0025061) #35	Ift80 (MGP_CAROLIEiJ_G0025062) #36	Smc4 (MGP_CAROLIEiJ_G0025063) #37
Shrew mouse	MODERN SPECIES	17	Dhx36 (MGP_PahariEiJ_G0026476)	Gpr149 (MGP_PahariEiJ_G0026477) #7	Mme (MGP_PahariEiJ_G0026478) #8	Plch1 (MGP_PahariEiJ_G0026479) #10	E130311K13Rik (MGP_PahariEiJ_G0026480) #11	Slc33a1 (MGP_PahariEiJ_G0026481) #12	Gmps (MGP_PahariEiJ_G0026482) #13	Vmn2r1 (MGP_PahariEiJ_G0026483)	MGP_PahariEiJ_G0026484	Kcnab1 (MGP_PahariEiJ_G0026485) #15	Ssr3 (MGP_PahariEiJ_G0026486) #16	Tiparp (MGP_PahariEiJ_G0026487) #17	MGP_PahariEiJ_G0026488	Ccnl1 (MGP_PahariEiJ_G0026489) #20	Veph1 (MGP_PahariEiJ_G0026490) #21	Ptx3 (MGP_PahariEiJ_G0026491) #22	Shox2 (MGP_PahariEiJ_G0026492) #25	Rsrc1 (MGP_PahariEiJ_G0026493) #26	Mlf1 (MGP_PahariEiJ_G0026494) #27	Gfm1 (MGP_PahariEiJ_G0026495) #28	Lxn (MGP_PahariEiJ_G0026496) #29	Rarres1 (MGP_PahariEiJ_G0026497) #30	Mfsd1 (MGP_PahariEiJ_G0026498) #31	MGP_PahariEiJ_G0001977	Iqcj (MGP_PahariEiJ_G0026499)	MGP_PahariEiJ_G0026500 #32	MGP_PahariEiJ_G0026501 #32	Il12a (MGP_PahariEiJ_G0026502) #34	MGP_PahariEiJ_G0026503	1110032F04Rik (MGP_PahariEiJ_G0026504) #35	Ift80 (MGP_PahariEiJ_G0026505) #36
Rat	MODERN SPECIES	11	Gmps (ENSRNOG00000051151) #13	Vom2r44 (ENSRNOG00000030104)	Vom2r45 (ENSRNOG00000064237)	Vom2r46 (ENSRNOG00000068452)	ENSRNOG00000064787	LOC120100835 (ENSRNOG00000066617)	AABR07010333.1 (ENSRNOG00000031248)	Vom2r47 (ENSRNOG00000028345)	Kcnab1 (ENSRNOG00000056697) #15	Ssr3 (ENSRNOG00000011148) #16	Tiparp (ENSRNOG00000011238) #17	Lekr1 (ENSRNOG00000031247) #18	Ccnl1 (ENSRNOG00000011586) #20	Veph1 (ENSRNOG00000012427) #21	ENSRNOG00000069471	Ptx3 (ENSRNOG00000012280) #22	Shox2 (ENSRNOG00000012478) #25	Rsrc1 (ENSRNOG00000062777) #26	Mlf1 (ENSRNOG00000012827) #27	Gfm1 (ENSRNOG00000012873) #28	Lxn (ENSRNOG00000013572) #29	Rarres1 (ENSRNOG00000037853) #30	Mfsd1 (ENSRNOG00000013790) #31	ENSRNOG00000066920	Schip1 (ENSRNOG00000009276) #32	Il12a (ENSRNOG00000009468) #34	LOC100362176 (ENSRNOG00000009803) #35	Ift80 (ENSRNOG00000009808) #36	Smc4 (ENSRNOG00000010274) #37	Trim59 (ENSRNOG00000010515)	Kpna4 (ENSRNOG00000010768)
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00940000168816	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Golden Hamster	MODERN SPECIES	694	Arhgef26 (ENSMAUG00000020238)	Dhx36 (ENSMAUG00000000158)	Gpr149 (ENSMAUG00000002545) #7	Mme (ENSMAUG00000005415) #8	ENSMAUG00000010321	Plch1 (ENSMAUG00000015272) #10	E130311K13Rik (ENSMAUG00000016143) #11	Slc33a1 (ENSMAUG00000007872) #12	Gmps (ENSMAUG00000009597) #13	Kcnab1 (ENSMAUG00000008327) #15	Ssr3 (ENSMAUG00000012131) #16	Tiparp (ENSMAUG00000013170) #17	ENSMAUG00000008702	Ccnl1 (ENSMAUG00000010127) #20	Veph1 (ENSMAUG00000011592) #21	Ptx3 (ENSMAUG00000013157) #22	Shox2 (ENSMAUG00000010791) #25	Rsrc1 (ENSMAUG00000012551) #26	ENSMAUG00000014811 #27	Gfm1 (ENSMAUG00000000611) #28	Lxn (ENSMAUG00000005608) #29	ENSMAUG00000010396 #30	Mfsd1 (ENSMAUG00000011768) #31
Chinese hamster chok1gshd	MODERN SPECIES	352	ENSCGRG00001021700	Plch1 (ENSCGRG00001000217) #10	E130311K13Rik (ENSCGRG00001024290) #11	Slc33a1 (ENSCGRG00001018761) #12	Gmps (ENSCGRG00001018772) #13	Vmn2r1 (ENSCGRG00001023200)	ENSCGRG00001017013	ENSCGRG00001005615	Kcnab1 (ENSCGRG00001005457) #15	Ssr3 (ENSCGRG00001019723) #16	Tiparp (ENSCGRG00001011123) #17	ENSCGRG00001018287	ENSCGRG00001012986 #18	Ccnl1 (ENSCGRG00001000165) #20	ENSCGRG00001019867	Ptx3 (ENSCGRG00001000361) #22	Veph1 (ENSCGRG00001013806) #21	Shox2 (ENSCGRG00001011092) #25	ENSCGRG00001004798 #26	ENSCGRG00001016799	Lxn (ENSCGRG00001022023) #29	GFM1 (ENSCGRG00001022095) #28	Rarres1 (ENSCGRG00001019406) #30	Mfsd1 (ENSCGRG00001015422) #31	ENSCGRG00001016644	Schip1 (ENSCGRG00001023430) #32	Il12a (ENSCGRG00001009859) #34	ENSCGRG00001021940	1110032F04Rik (ENSCGRG00001003309) #35	Ift80 (ENSCGRG00001016127) #36	Trim59 (ENSCGRG00001007406)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473.i	ENSGT00940000160473.j	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Northern American deer mouse	MODERN SPECIES	19	Strit1 (ENSPEMG00000012153)	Plch1 (ENSPEMG00000003317) #10	E130311K13Rik (ENSPEMG00000024310) #11	Slc33a1 (ENSPEMG00000011599) #12	Gmps (ENSPEMG00000009799) #13	Vmn2r1 (ENSPEMG00000000138)	ENSPEMG00000005018	ENSPEMG00000003936	Kcnab1 (ENSPEMG00000020802) #15	Ssr3 (ENSPEMG00000008767) #16	Tiparp (ENSPEMG00000014866) #17	ENSPEMG00000016123	ENSPEMG00000027465 #18	Ccnl1 (ENSPEMG00000000691) #20	Veph1 (ENSPEMG00000020957) #21	Ptx3 (ENSPEMG00000029412) #22	Shox2 (ENSPEMG00000024952) #25	ENSPEMG00000010988 #26	Mlf1 (ENSPEMG00000014175) #27	Gfm1 (ENSPEMG00000008942) #28	Lxn (ENSPEMG00000013211) #29	Rarres1 (ENSPEMG00000020322) #30	Mfsd1 (ENSPEMG00000022685) #31	ENSPEMG00000027419	Schip1 (ENSPEMG00000022541) #32	Il12a (ENSPEMG00000016462) #34	1110032F04Rik (ENSPEMG00000029770) #35	Ift80 (ENSPEMG00000016207) #36	Smc4 (ENSPEMG00000009281) #37	Trim59 (ENSPEMG00000027017)	Kpna4 (ENSPEMG00000021777)
Prairie vole	MODERN SPECIES		Mme (ENSMOCG00000019325) #8	ENSMOCG00000013919	ENSMOCG00000013101	Plch1 (ENSMOCG00000021300) #10	E130311K13Rik (ENSMOCG00000022255) #11	Slc33a1 (ENSMOCG00000015778) #12	Gmps (ENSMOCG00000021456) #13	Vmn2r1 (ENSMOCG00000016363)	ENSMOCG00000018463	Kcnab1 (ENSMOCG00000006596) #15	Ssr3 (ENSMOCG00000000580) #16	Tiparp (ENSMOCG00000011217) #17	ENSMOCG00000001595	Ccnl1 (ENSMOCG00000020951) #20	Veph1 (ENSMOCG00000021347) #21	Ptx3 (ENSMOCG00000022316) #22	Shox2 (ENSMOCG00000018618) #25	Rsrc1 (ENSMOCG00000021372) #26	Mlf1 (ENSMOCG00000018934) #27	Gfm1 (ENSMOCG00000000465) #28	Lxn (ENSMOCG00000011862) #29	Rarres1 (ENSMOCG00000016080) #30	Mfsd1 (ENSMOCG00000007444) #31	Schip1 (ENSMOCG00000005163) #32	Il12a (ENSMOCG00000006247) #34	ENSMOCG00000022387	1110032F04Rik (ENSMOCG00000008342) #35	Ift80 (ENSMOCG00000011935) #36	Smc4 (ENSMOCG00000020908) #37	ENSMOCG00000019030	Kpna4 (ENSMOCG00000022257)
Upper Galilee mountains blind mole rat	MODERN SPECIES	991										Kcnab1 (ENSNGAG00000012290) #15	Ssr3 (ENSNGAG00000001726) #16	Tiparp (ENSNGAG00000024372) #17	ENSNGAG00000014628	Ccnl1 (ENSNGAG00000017562) #20	Veph1 (ENSNGAG00000023607) #21	Ptx3 (ENSNGAG00000019190) #22	Shox2 (ENSNGAG00000021490) #25	Rsrc1 (ENSNGAG00000009486) #26	Mlf1 (ENSNGAG00000005441) #27	Gfm1 (ENSNGAG00000012375) #28	Lxn (ENSNGAG00000023491) #29	Rarres1 (ENSNGAG00000021830) #30	Mfsd1 (ENSNGAG00000023897) #31	Iqcj (ENSNGAG00000023171)
Lesser Egyptian jerboa	MODERN SPECIES	47							Kcnab1 (ENSJJAG00000018614) #15	Ssr3 (ENSJJAG00000017278) #16	Tiparp (ENSJJAG00000014369) #17	ENSJJAG00000003128	ENSJJAG00000016465	ENSJJAG00000017620	ENSJJAG00000021019	Ccnl1 (ENSJJAG00000023702) #20	ENSJJAG00000011566	Ptx3 (ENSJJAG00000022554) #22	Veph1 (ENSJJAG00000014528) #21	ENSJJAG00000016473	ENSJJAG00000014616	Shox2 (ENSJJAG00000014041) #25	ENSJJAG00000013277	Rsrc1 (ENSJJAG00000013815) #26	Mlf1 (ENSJJAG00000016680) #27	Lxn (ENSJJAG00000013889) #29	Gfm1 (ENSJJAG00000016447) #28	Rarres1 (ENSJJAG00000020808) #30	Mfsd1 (ENSJJAG00000018648) #31	Iqcj (ENSJJAG00000011023)	ENSJJAG00000019081 #32	Il12a (ENSJJAG00000012071) #34	1110032F04Rik (ENSJJAG00000010657) #35
Kangaroo rat	MODERN SPECIES	349	Arhgef26 (ENSDORG00000004847)	Dhx36 (ENSDORG00000004848)	Mme (ENSDORG00000005785) #8	Plch1 (ENSDORG00000009727) #10	E130311K13Rik (ENSDORG00000023719) #11	Slc33a1 (ENSDORG00000013954) #12	Gmps (ENSDORG00000014996) #13	ENSDORG00000001855	ENSDORG00000029512	Kcnab1 (ENSDORG00000000796) #15	ENSDORG00000024089 #16	Tiparp (ENSDORG00000013554) #17	ENSDORG00000023530	Ccnl1 (ENSDORG00000008224) #20	Veph1 (ENSDORG00000014560) #21	Ptx3 (ENSDORG00000014563) #22	Shox2 (ENSDORG00000006033) #25	ENSDORG00000014162 #26	Mlf1 (ENSDORG00000014164) #27	Gfm1 (ENSDORG00000014165) #28	Lxn (ENSDORG00000014168) #29	ENSDORG00000026605 #30	Mfsd1 (ENSDORG00000001805) #31	Iqcj (ENSDORG00000028467)	Schip1 (ENSDORG00000004328) #32	ENSDORG00000026572	Ift80 (ENSDORG00000002083) #36	Smc4 (ENSDORG00000002090) #37	Trim59 (ENSDORG00000002094)	Kpna4 (ENSDORG00000026803)	Ppm1l (ENSDORG00000029270)
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01030000234590.A.b.a.b.b	ENSGT00940000155866	ENSGT00390000015458
Marmotini	ANCESTRAL SPECIES	25	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT01030000235172	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01030000234590.A.b.a.b.b	ENSGT00940000155866	ENSGT00390000015458
Marmotini_b	ANCESTRAL SPECIES	46	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT01100000265011	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT01030000234590.A.b.b	ENSGT01030000234590.A.b.a.b.a	ENSGT01030000234590.A.b.a.b.b	ENSGT00940000155866	ENSGT00390000015458
Arctic ground squirrel	MODERN SPECIES	111	ENSUPAG00010006817	PLCH1 (ENSUPAG00010006835) #10	ENSUPAG00010007178	C3orf33 (ENSUPAG00010007194) #11	SLC33A1 (ENSUPAG00010007214) #12	GMPS (ENSUPAG00010007230) #13	ENSUPAG00010007272	KCNAB1 (ENSUPAG00010007381) #15	SSR3 (ENSUPAG00010007397) #16	ENSUPAG00010007423	TIPARP (ENSUPAG00010007433) #17	ENSUPAG00010007447	LEKR1 (ENSUPAG00010007452) #18	CCNL1 (ENSUPAG00010007457) #20	VEPH1 (ENSUPAG00010007462) #21	PTX3 (ENSUPAG00010007477) #22	SHOX2 (ENSUPAG00010007482) #25	RSRC1 (ENSUPAG00010007492) #26	MLF1 (ENSUPAG00010007820) #27	GFM1 (ENSUPAG00010007852) #28	LXN (ENSUPAG00010007947) #29	RARRES1 (ENSUPAG00010007963) #30	MFSD1 (ENSUPAG00010007976) #31	ENSUPAG00010007997
Squirrel	MODERN SPECIES	119	GPR149 (ENSSTOG00000003946) #7	MME (ENSSTOG00000000081) #8	ENSSTOG00000030767	PLCH1 (ENSSTOG00000000090) #10	C3orf33 (ENSSTOG00000027383) #11	SLC33A1 (ENSSTOG00000000095) #12	GMPS (ENSSTOG00000026541) #13	ENSSTOG00000011094	KCNAB1 (ENSSTOG00000025723) #15	SSR3 (ENSSTOG00000013773) #16	TIPARP (ENSSTOG00000027682) #17	ENSSTOG00000031297	LEKR1 (ENSSTOG00000026813) #18	CCNL1 (ENSSTOG00000011805) #20	VEPH1 (ENSSTOG00000014695) #21	PTX3 (ENSSTOG00000023681) #22	SHOX2 (ENSSTOG00000010121) #25	RSRC1 (ENSSTOG00000021591) #26	ENSSTOG00000004812	MLF1 (ENSSTOG00000010142) #27	GFM1 (ENSSTOG00000010150) #28	LXN (ENSSTOG00000010168) #29	RARRES1 (ENSSTOG00000010175) #30	MFSD1 (ENSSTOG00000010188) #31	ENSSTOG00000026854	ENSSTOG00000014607 #32	IL12A (ENSSTOG00000014615) #34	TM4SF4 (ENSSTOG00000010877)	TM4SF1 (ENSSTOG00000025707)	TM4SF18 (ENSSTOG00000026073)	ENSSTOG00000002890
Alpin marmot	MODERN SPECIES	19	PLCH1 (ENSMMMG00000015750) #10	C3orf33 (ENSMMMG00000015801) #11	SLC33A1 (ENSMMMG00000015806) #12	ENSMMMG00000015821	GMPS (ENSMMMG00000015827) #13	ENSMMMG00000015856	KCNAB1 (ENSMMMG00000015897) #15	SSR3 (ENSMMMG00000015908) #16	ENSMMMG00000015911	TIPARP (ENSMMMG00000015913) #17	ENSMMMG00000015928	ENSMMMG00000015936 #18	CCNL1 (ENSMMMG00000015946) #20	ENSMMMG00000015953	VEPH1 (ENSMMMG00000015959) #21	ENSMMMG00000015978 #22	RSRC1 (ENSMMMG00000016000) #26	MLF1 (ENSMMMG00000016176) #27	GFM1 (ENSMMMG00000016194) #28	LXN (ENSMMMG00000016210) #29	RARRES1 (ENSMMMG00000016234) #30	MFSD1 (ENSMMMG00000016249) #31	ENSMMMG00000016261	ENSMMMG00000016266	SCHIP1 (ENSMMMG00000016272) #32	IL12A (ENSMMMG00000016274) #34	TM4SF4 (ENSMMMG00000016284)	TM4SF1 (ENSMMMG00000016291)	TM4SF18 (ENSMMMG00000016299)	CP (ENSMMMG00000016360)	HPS3 (ENSMMMG00000016598)
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005006949	MME (ENSSVLG00005006865) #8	STRIT1 (ENSSVLG00005006829) #9	PLCH1 (ENSSVLG00005006514) #10	ENSSVLG00005006455	C3orf33 (ENSSVLG00005006407) #11	SLC33A1 (ENSSVLG00005006332) #12	GMPS (ENSSVLG00005006221) #13	ENSSVLG00005006157	KCNAB1 (ENSSVLG00005005761) #15	ENSSVLG00005005598 #16	TIPARP (ENSSVLG00005005579) #17	LEKR1 (ENSSVLG00005005558) #18	CCNL1 (ENSSVLG00005005434) #20	ENSSVLG00005005378	PTX3 (ENSSVLG00005005353) #22	VEPH1 (ENSSVLG00005005203) #21	SHOX2 (ENSSVLG00005005099) #25	RSRC1 (ENSSVLG00005005040) #26	MLF1 (ENSSVLG00005004886) #27	LXN (ENSSVLG00005004800) #29	GFM1 (ENSSVLG00005015861) #28	RARRES1 (ENSSVLG00005015785) #30	MFSD1 (ENSSVLG00005015449) #31	ENSSVLG00005015377	ENSSVLG00005015250	ENSSVLG00005014764 #32	IL12A (ENSSVLG00005014635) #34	TM4SF4 (ENSSVLG00005014565)	TM4SF1 (ENSSVLG00005014530)	TM4SF18 (ENSSVLG00005014461)
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499.b #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000019192 #11	SLC33A1 (ENSHGLG00000042989) #12	ENSHGLG00000019482 #13	ENSHGLG00000019405	ENSHGLG00000039018	KCNAB1 (ENSHGLG00000019332) #15	SSR3 (ENSHGLG00000037144) #16	ENSHGLG00000020605	ENSHGLG00000010960 #17	ENSHGLG00000034810	ENSHGLG00000045711	ENSHGLG00000011740	ENSHGLG00000011933 #20	ENSHGLG00000012347	ENSHGLG00000045178	PTX3 (ENSHGLG00000012461) #22	ENSHGLG00000012178 #21	ENSHGLG00000046633	ENSHGLG00000012718	SHOX2 (ENSHGLG00000012846) #25	ENSHGLG00000018168	ENSHGLG00000044928	ENSHGLG00000039235	RSRC1 (ENSHGLG00000018148) #26	MLF1 (ENSHGLG00000016829) #27	ENSHGLG00000000559	LXN (ENSHGLG00000033224) #29	GFM1 (ENSHGLG00000016855) #28	RARRES1 (ENSHGLG00000049842) #30	MFSD1 (ENSHGLG00000016907) #31	ENSHGLG00000021053
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499.b #36	ENSGT00900000141094 #37	ENSGT00940000160146.C	ENSGT01050000244891.C.c.a
Guinea pig	MODERN SPECIES	8	MME (ENSCPOG00000007994) #8	STRIT1 (ENSCPOG00000037602) #9	PLCH1 (ENSCPOG00000004751) #10	ENSCPOG00000040284	C3orf33 (ENSCPOG00000035789) #11	SLC33A1 (ENSCPOG00000005212) #12	GMPS (ENSCPOG00000011574) #13	ENSCPOG00000011335	ENSCPOG00000033396	KCNAB1 (ENSCPOG00000004890) #15	SSR3 (ENSCPOG00000037065) #16	TIPARP (ENSCPOG00000000345) #17	ENSCPOG00000025111	ENSCPOG00000031670 #20	VEPH1 (ENSCPOG00000010480) #21	PTX3 (ENSCPOG00000037636) #22	SHOX2 (ENSCPOG00000038435) #25	RSRC1 (ENSCPOG00000000876) #26	MLF1 (ENSCPOG00000000426) #27	GFM1 (ENSCPOG00000001194) #28	LXN (ENSCPOG00000001197) #29	RARRES1 (ENSCPOG00000037396) #30	MFSD1 (ENSCPOG00000015291) #31	ENSCPOG00000015295	SCHIP1 (ENSCPOG00000003961) #32	Il12a (ENSCPOG00000000016) #34	ENSCPOG00000026743 #36	SMC4 (ENSCPOG00000006130) #37	TRIM59 (ENSCPOG00000006122)	KPNA4 (ENSCPOG00000010671)	ARL14 (ENSCPOG00000010678)
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499.b #36	ENSGT00900000141094 #37	ENSGT00940000160146.C	ENSGT01050000244891.C.c.a	ENSGT00940000157030
Long-tailed chinchilla	MODERN SPECIES	155	GPR149 (ENSCLAG00000004034) #7	MME (ENSCLAG00000001839) #8	ENSCLAG00000002045	PLCH1 (ENSCLAG00000002471) #10	C3orf33 (ENSCLAG00000004358) #11	SLC33A1 (ENSCLAG00000007266) #12	GMPS (ENSCLAG00000007499) #13	ENSCLAG00000012602	KCNAB1 (ENSCLAG00000012692) #15	SSR3 (ENSCLAG00000002284) #16	TIPARP (ENSCLAG00000002423) #17	ENSCLAG00000002596	ENSCLAG00000002747 #18	ENSCLAG00000002842 #20	VEPH1 (ENSCLAG00000003443) #21	PTX3 (ENSCLAG00000003570) #22	SHOX2 (ENSCLAG00000003167) #25	RSRC1 (ENSCLAG00000003542) #26	MLF1 (ENSCLAG00000002260) #27	GFM1 (ENSCLAG00000002503) #28	LXN (ENSCLAG00000002640) #29	RARRES1 (ENSCLAG00000002310) #30	MFSD1 (ENSCLAG00000002835) #31	ENSCLAG00000003229 #32	ENSCLAG00000004456 #34	IFT80 (ENSCLAG00000004781) #36	SMC4 (ENSCLAG00000002256) #37	TRIM59 (ENSCLAG00000017476)	KPNA4 (ENSCLAG00000002716)	PPM1L (ENSCLAG00000002821)	B3GALNT1 (ENSCLAG00000002991)
Degu	MODERN SPECIES	156	ENSODEG00000004144 #10	ENSODEG00000019143	SLC33A1 (ENSODEG00000004913) #12	GMPS (ENSODEG00000005062) #13	ENSODEG00000005195	ENSODEG00000005266	ENSODEG00000006147	KCNAB1 (ENSODEG00000006185) #15	SSR3 (ENSODEG00000006236) #16	TIPARP (ENSODEG00000003454) #17	ENSODEG00000003611	CCNL1 (ENSODEG00000003645) #20	ENSODEG00000019034	ENSODEG00000003686	VEPH1 (ENSODEG00000003728) #21	PTX3 (ENSODEG00000003883) #22	SHOX2 (ENSODEG00000003934) #25	RSRC1 (ENSODEG00000003974) #26	MLF1 (ENSODEG00000004264) #27	ENSODEG00000004275	GFM1 (ENSODEG00000004316) #28	LXN (ENSODEG00000004470) #29	RARRES1 (ENSODEG00000004496) #30	ENSODEG00000003386	MFSD1 (ENSODEG00000003463) #31	ENSODEG00000003705	ENSODEG00000003766	ENSODEG00000003786	IQCJ (ENSODEG00000003870)	ENSODEG00000019016	ENSODEG00000004394 #32
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01100000263515.a.b.a.a #22
Hedgehog	MODERN SPECIES	16297																ENSEEUG00000007561 #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Suina	ANCESTRAL SPECIES	1	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Chacoan peccary	MODERN SPECIES	944	DHX36 (ENSCWAG00000019200)	GPR149 (ENSCWAG00000019481) #7	MME (ENSCWAG00000019525) #8	STRIT1 (ENSCWAG00000019605) #9	ENSCWAG00000019615	PLCH1 (ENSCWAG00000019684) #10	C3orf33 (ENSCWAG00000020351) #11	SLC33A1 (ENSCWAG00000020377) #12	GMPS (ENSCWAG00000020402) #13	KCNAB1 (ENSCWAG00000020534) #15	SSR3 (ENSCWAG00000021071) #16	TIPARP (ENSCWAG00000021084) #17	LEKR1 (ENSCWAG00000021096) #18	CCNL1 (ENSCWAG00000021119) #20	VEPH1 (ENSCWAG00000021141) #21	PTX3 (ENSCWAG00000021153) #22	SHOX2 (ENSCWAG00000021164) #25	RSRC1 (ENSCWAG00000004465) #26	MLF1 (ENSCWAG00000004549) #27	GFM1 (ENSCWAG00000005248) #28	LXN (ENSCWAG00000005330) #29	RARRES1 (ENSCWAG00000005368) #30	ENSCWAG00000005382	MFSD1 (ENSCWAG00000005417) #31	ENSCWAG00000005569	IQCJ (ENSCWAG00000005599)	ENSCWAG00000005648 #32	IL12A (ENSCWAG00000005770) #34	C3orf80 (ENSCWAG00000005889) #35	IFT80 (ENSCWAG00000005901) #36	ENSCWAG00000006029
Pig	MODERN SPECIES	4	DHX36 (ENSSSCG00000024916)	GPR149 (ENSSSCG00000023582) #7	MME (ENSSSCG00000011723) #8	STRIT1 (ENSSSCG00000057007) #9	PLCH1 (ENSSSCG00000026718) #10	SLC33A1 (ENSSSCG00000025316) #12	GMPS (ENSSSCG00000028855) #13	ENSSSCG00000011724	KCNAB1 (ENSSSCG00000025810) #15	ENSSSCG00000047110	SSR3 (ENSSSCG00000030567) #16	TIPARP (ENSSSCG00000027646) #17	LEKR1 (ENSSSCG00000026579) #18	CCNL1 (ENSSSCG00000029352) #20	VEPH1 (ENSSSCG00000011726) #21	PTX3 (ENSSSCG00000011727) #22	SHOX2 (ENSSSCG00000025238) #25	RSRC1 (ENSSSCG00000027556) #26	MLF1 (ENSSSCG00000059095) #27	ENSSSCG00000047511	GFM1 (ENSSSCG00000025651) #28	LXN (ENSSSCG00000020984) #29	RARRES1 (ENSSSCG00000028623) #30	MFSD1 (ENSSSCG00000026018) #31	ENSSSCG00000022054	IQCJ (ENSSSCG00000011728)	ENSSSCG00000011729 #32	ENSSSCG00000059448	IL12A (ENSSSCG00000011730) #34	C3orf80 (ENSSSCG00000035935) #35	IFT80 (ENSSSCG00000011733) #36
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00730000111029.h	ENSGT00940000156760 #15	ENSGT00940000154586.g.a	ENSGT00390000000970.b.f #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000172218	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00940000154586.g.a	ENSGT00390000000970.b.f #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000165902	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000172218	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00940000154586.g.a	ENSGT00390000000970.b.f #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000165902	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Dolphin	MODERN SPECIES	2587															VEPH1 (ENSTTRG00000014612) #21	PTX3 (ENSTTRG00000014615) #22
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000172218	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00940000154586.g.a	ENSGT00390000000970.b.f #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000165902	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00550000075103.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000172218	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b.f #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Narwhal	MODERN SPECIES	297	ENSMMNG00015003103	MME (ENSMMNG00015003033) #8	STRIT1 (ENSMMNG00015002983) #9	ENSMMNG00015002967	ENSMMNG00015002948	PLCH1 (ENSMMNG00015002782) #10	C3orf33 (ENSMMNG00015002700) #11	SLC33A1 (ENSMMNG00015002672) #12	GMPS (ENSMMNG00015002623) #13	ENSMMNG00015002576	KCNAB1 (ENSMMNG00015002282) #15	ENSMMNG00015002141 #16	TIPARP (ENSMMNG00015002122) #17	LEKR1 (ENSMMNG00015002068) #18	CCNL1 (ENSMMNG00015002007) #20	PTX3 (ENSMMNG00015001964) #22	VEPH1 (ENSMMNG00015001888) #21	SHOX2 (ENSMMNG00015001781) #25	RSRC1 (ENSMMNG00015001723) #26	MLF1 (ENSMMNG00015001539) #27	GFM1 (ENSMMNG00015001384) #28	ENSMMNG00015001295 #30	MFSD1 (ENSMMNG00015001202) #31	IQCJ (ENSMMNG00015001145)	ENSMMNG00015001033 #32	IL12A (ENSMMNG00015000911) #34	ENSMMNG00015000856	C3orf80 (ENSMMNG00015000836) #35	IFT80 (ENSMMNG00015000800) #36	SMC4 (ENSMMNG00015000670) #37	TRIM59 (ENSMMNG00015000625)
Beluga whale	MODERN SPECIES	111			ENSDLEG00000011673	ENSDLEG00000011623	ENSDLEG00000011607	PLCH1 (ENSDLEG00000011538) #10	SLC33A1 (ENSDLEG00000011505) #12	GMPS (ENSDLEG00000011386) #13	KCNAB1 (ENSDLEG00000011333) #15	SSR3 (ENSDLEG00000011325) #16	TIPARP (ENSDLEG00000011316) #17	ENSDLEG00000011306	ENSDLEG00000011300	ENSDLEG00000011286 #18	CCNL1 (ENSDLEG00000011260) #20	PTX3 (ENSDLEG00000011229) #22	VEPH1 (ENSDLEG00000011200) #21	SHOX2 (ENSDLEG00000011172) #25	ENSDLEG00000011145	MLF1 (ENSDLEG00000011124) #27	LXN (ENSDLEG00000011104) #29	GFM1 (ENSDLEG00000011079) #28	RARRES1 (ENSDLEG00000011063) #30	MFSD1 (ENSDLEG00000010979) #31	IQCJ (ENSDLEG00000010968)	ENSDLEG00000010942 #32	IL12A (ENSDLEG00000010922) #34	ENSDLEG00000010905	C3orf80 (ENSDLEG00000010897) #35	IFT80 (ENSDLEG00000010858) #36	SMC4 (ENSDLEG00000010806) #37
Vaquita	MODERN SPECIES	15	STRIT1 (ENSPSNG00000018071) #9	PLCH1 (ENSPSNG00000018233) #10	ENSPSNG00000018941	C3orf33 (ENSPSNG00000018983) #11	SLC33A1 (ENSPSNG00000019036) #12	GMPS (ENSPSNG00000019139) #13	ENSPSNG00000019296	KCNAB1 (ENSPSNG00000019449) #15	ENSPSNG00000000110	SSR3 (ENSPSNG00000000147) #16	TIPARP (ENSPSNG00000000170) #17	LEKR1 (ENSPSNG00000000223) #18	ENSPSNG00000000259	CCNL1 (ENSPSNG00000000286) #20	VEPH1 (ENSPSNG00000000364) #21	PTX3 (ENSPSNG00000000445) #22	ENSPSNG00000000457	SHOX2 (ENSPSNG00000000501) #25	RSRC1 (ENSPSNG00000000561) #26	MLF1 (ENSPSNG00000000637) #27	GFM1 (ENSPSNG00000000706) #28	LXN (ENSPSNG00000000748) #29	RARRES1 (ENSPSNG00000000775) #30	MFSD1 (ENSPSNG00000000817) #31	IQCJ (ENSPSNG00000000860)	ENSPSNG00000000914 #32	IL12A (ENSPSNG00000001025) #34	C3orf80 (ENSPSNG00000001048) #35	IFT80 (ENSPSNG00000001070) #36	SMC4 (ENSPSNG00000001142) #37	TRIM59 (ENSPSNG00000001252)
Sperm whale	MODERN SPECIES		PLCH1 (ENSPCTG00005002793) #10	ENSPCTG00005002938	C1H3orf33 (ENSPCTG00005002945) #11	SLC33A1 (ENSPCTG00005002962) #12	GMPS (ENSPCTG00005003000) #13	ENSPCTG00005003035	ENSPCTG00005003068	KCNAB1 (ENSPCTG00005003144) #15	ENSPCTG00005003569	SSR3 (ENSPCTG00005003579) #16	TIPARP (ENSPCTG00005003592) #17	LEKR1 (ENSPCTG00005003617) #18	ENSPCTG00005003638	CCNL1 (ENSPCTG00005003663) #20	VEPH1 (ENSPCTG00005003733) #21	PTX3 (ENSPCTG00005003765) #22	ENSPCTG00005003773	SHOX2 (ENSPCTG00005003800) #25	RSRC1 (ENSPCTG00005003830) #26	MLF1 (ENSPCTG00005003880) #27	GFM1 (ENSPCTG00005003953) #28	LXN (ENSPCTG00005003994) #29	LXN (ENSPCTG00005004011) #30	MFSD1 (ENSPCTG00005004030) #31	IQCJ (ENSPCTG00005004063)	ENSPCTG00005004096 #32	IL12A (ENSPCTG00005004147) #34	ENSPCTG00005004164	ENSPCTG00005004183	C1H3orf80 (ENSPCTG00005004196) #35	IFT80 (ENSPCTG00005000214) #36
Blue whale	MODERN SPECIES	15	STRIT1 (ENSBMSG00010002387) #9	PLCH1 (ENSBMSG00010002496) #10	ENSBMSG00010003115	C3orf33 (ENSBMSG00010003125) #11	SLC33A1 (ENSBMSG00010003142) #12	GMPS (ENSBMSG00010003175) #13	ENSBMSG00010003213	ENSBMSG00010003257	KCNAB1 (ENSBMSG00010003309) #15	ENSBMSG00010003383	ENSBMSG00010003398 #16	TIPARP (ENSBMSG00010003410) #17	LEKR1 (ENSBMSG00010003429) #18	CCNL1 (ENSBMSG00010003451) #20	VEPH1 (ENSBMSG00010003516) #21	PTX3 (ENSBMSG00010003568) #22	ENSBMSG00010003577	SHOX2 (ENSBMSG00010003594) #25	RSRC1 (ENSBMSG00010003618) #26	ENSBMSG00010003662 #27	GFM1 (ENSBMSG00010003975) #28	LXN (ENSBMSG00010003995) #29	RARRES1 (ENSBMSG00010004015) #30	ENSBMSG00010004038 #31	ENSBMSG00010004091	ENSBMSG00010004107	IQCJ (ENSBMSG00010004126)	ENSBMSG00010004177 #32	IL12A (ENSBMSG00010004549) #34	ENSBMSG00010004653	ENSBMSG00010004671
Pecora	ANCESTRAL SPECIES	8	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Percora_a	ANCESTRAL SPECIES	7	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00950000182995.e.a.a.a.fb.a.b	ENSGT00940000156760 #15	ENSGT00390000000970.b.g #16	ENSGT00940000155368 #17	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Rambouillet Sheep	MODERN SPECIES		DHX36 (ENSOARG00020002569)	GPR149 (ENSOARG00020002480) #7	MME (ENSOARG00020002391) #8	STRIT1 (ENSOARG00020002364) #9	PLCH1 (ENSOARG00020002177) #10	C3orf33 (ENSOARG00020002111) #11	SLC33A1 (ENSOARG00020002067) #12	GMPS (ENSOARG00020001873) #13	ENSOARG00020001823	KCNAB1 (ENSOARG00020001172) #15	SSR3 (ENSOARG00020001079) #16	TIPARP (ENSOARG00020001069) #17	ENSOARG00020001059	LEKR1 (ENSOARG00020001026) #18	CCNL1 (ENSOARG00020000976) #20	PTX3 (ENSOARG00020000946) #22	VEPH1 (ENSOARG00020000860) #21	SHOX2 (ENSOARG00020000755) #25	RSRC1 (ENSOARG00020000715) #26	MLF1 (ENSOARG00020000362) #27	LXN (ENSOARG00020000302) #29	GFM1 (ENSOARG00020000197) #28	RARRES1 (ENSOARG00020000163) #30	ENSOARG00020006018	MFSD1 (ENSOARG00020005861) #31	ENSOARG00020005844	ENSOARG00020005692 #32	IL12A (ENSOARG00020005615) #34	C3orf80 (ENSOARG00020005601) #35	ENSOARG00020005593	IFT80 (ENSOARG00020005544) #36
Goat	MODERN SPECIES		ENSCHIG00000017243	MME (ENSCHIG00000018324) #8	PLCH1 (ENSCHIG00000024716) #10	ENSCHIG00000011194	C3orf33 (ENSCHIG00000025795) #11	SLC33A1 (ENSCHIG00000013645) #12	GMPS (ENSCHIG00000022844) #13	ENSCHIG00000020039	ENSCHIG00000025482	KCNAB1 (ENSCHIG00000023684) #15	SSR3 (ENSCHIG00000012338) #16	TIPARP (ENSCHIG00000018721) #17	ENSCHIG00000023809	ENSCHIG00000010147 #18	CCNL1 (ENSCHIG00000015405) #20	PTX3 (ENSCHIG00000012523) #22	VEPH1 (ENSCHIG00000027071) #21	SHOX2 (ENSCHIG00000016128) #25	ENSCHIG00000011968	MLF1 (ENSCHIG00000018923) #27	LXN (ENSCHIG00000026258) #29	GFM1 (ENSCHIG00000015220) #28	RARRES1 (ENSCHIG00000020798) #30	MFSD1 (ENSCHIG00000025210) #31	ENSCHIG00000014424	IQCJ (ENSCHIG00000021729)	SCHIP1 (ENSCHIG00000004169) #32	ENSCHIG00000018805	IL12A (ENSCHIG00000022793) #34	ENSCHIG00000009835	ENSCHIG00000021362
Bovinae	ANCESTRAL SPECIES	6	ENSGT00390000003715 #7	ENSGT00390000013771.f.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Bos	ANCESTRAL SPECIES	7	ENSGT00390000003715 #7	ENSGT00390000013771.f.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT01080000259023	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00390000013771.f.a.b	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT01080000259023	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37
Domestic yak	MODERN SPECIES		MME (ENSBGRG00000009643) #8	STRIT1 (ENSBGRG00000009547) #9	ENSBGRG00000009536	PLCH1 (ENSBGRG00000007957) #10	C3orf33 (ENSBGRG00000007709) #11	ENSBGRG00000007689	SLC33A1 (ENSBGRG00000007545) #12	GMPS (ENSBGRG00000007144) #13	ENSBGRG00000017938	KCNAB1 (ENSBGRG00000017121) #15	SSR3 (ENSBGRG00000016835) #16	TIPARP (ENSBGRG00000016750) #17	ENSBGRG00000016728	LEKR1 (ENSBGRG00000016645) #18	CCNL1 (ENSBGRG00000016437) #20	PTX3 (ENSBGRG00000016322) #22	VEPH1 (ENSBGRG00000016007) #21	SHOX2 (ENSBGRG00000015647) #25	ENSBGRG00000015623	RSRC1 (ENSBGRG00000015425) #26	MLF1 (ENSBGRG00000014908) #27	LXN (ENSBGRG00000014790) #29	GFM1 (ENSBGRG00000014469) #28	RARRES1 (ENSBGRG00000014425) #30	MFSD1 (ENSBGRG00000014081) #31	ENSBGRG00000014047	ENSBGRG00000014031	ENSBGRG00000013519 #32	IL12A (ENSBGRG00000013416) #34	ENSBGRG00000013199	C3orf80 (ENSBGRG00000013162) #35
Wild yak	MODERN SPECIES	2397															VEPH1 (ENSBMUG00000011199) #21	PTX3 (ENSBMUG00000011240) #22
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00390000013771.f.a.b	ENSGT00940000156745 #8	ENSGT01080000259023	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Cow	MODERN SPECIES		ARHGEF26 (ENSBTAG00000013439)	DHX36 (ENSBTAG00000006142)	GPR149 (ENSBTAG00000006147) #7	ENSBTAG00000024623	MME (ENSBTAG00000002075) #8	PLCH1 (ENSBTAG00000008307) #10	C1H3orf33 (ENSBTAG00000005203) #11	SLC33A1 (ENSBTAG00000014318) #12	GMPS (ENSBTAG00000013013) #13	KCNAB1 (ENSBTAG00000018465) #15	SSR3 (ENSBTAG00000018471) #16	TIPARP (ENSBTAG00000012120) #17	ENSBTAG00000050129	ENSBTAG00000018009 #18	CCNL1 (ENSBTAG00000003851) #20	PTX3 (ENSBTAG00000009012) #22	VEPH1 (ENSBTAG00000024643) #21	SHOX2 (ENSBTAG00000005230) #25	RSRC1 (ENSBTAG00000031561) #26	MLF1 (ENSBTAG00000004126) #27	LXN (ENSBTAG00000009336) #29	GFM1 (ENSBTAG00000027795) #28	RARRES1 (ENSBTAG00000014713) #30	MFSD1 (ENSBTAG00000009263) #31	ENSBTAG00000038395	IQCJ (ENSBTAG00000003135)	SCHIP1 (ENSBTAG00000014960) #32	IL12A (ENSBTAG00000015150) #34	ENSBTAG00000052570	C1H3orf80 (ENSBTAG00000047247) #35	IFT80 (ENSBTAG00000031572) #36
Hybrid Bos Indicus	MODERN SPECIES		MME (ENSBIXG00005010777) #8	ENSBIXG00005010857	PLCH1 (ENSBIXG00005011013) #10	C3orf33 (ENSBIXG00005001018) #11	SLC33A1 (ENSBIXG00005011151) #12	ENSBIXG00005011169	GMPS (ENSBIXG00005011224) #13	ENSBIXG00005011267	KCNAB1 (ENSBIXG00005011415) #15	SSR3 (ENSBIXG00005001116) #16	ENSBIXG00005001118	TIPARP (ENSBIXG00005011554) #17	LEKR1 (ENSBIXG00005011662) #18	CCNL1 (ENSBIXG00005011760) #20	ENSBIXG00005011803	PTX3 (ENSBIXG00005011820) #22	VEPH1 (ENSBIXG00005011960) #21	SHOX2 (ENSBIXG00005012090) #25	ENSBIXG00005012116	ENSBIXG00005012125	RSRC1 (ENSBIXG00005012173) #26	MLF1 (ENSBIXG00005012285) #27	LXN (ENSBIXG00005000391) #29	GFM1 (ENSBIXG00005012325) #28	RARRES1 (ENSBIXG00005012340) #30	MFSD1 (ENSBIXG00005001318) #31	ENSBIXG00005012384	ENSBIXG00005012400	ENSBIXG00005012541 #32	IL12A (ENSBIXG00005001392) #34	ENSBIXG00005012707
American bison	MODERN SPECIES	3059	BMERB1 (ENSBBBG00000015983)	MPV17L (ENSBBBG00000016011)	PDXDC1 (ENSBBBG00000016102)	NTAN1 (ENSBBBG00000016129)	RRN3 (ENSBBBG00000016180)	ENSBBBG00000007260	ENSBBBG00000016195	PLA2G10 (ENSBBBG00000016218)	BFAR (ENSBBBG00000016242)	ENSBBBG00000016268	KCNAB1 (ENSBBBG00000016370) #15	SSR3 (ENSBBBG00000016407) #16	TIPARP (ENSBBBG00000016433) #17	LEKR1 (ENSBBBG00000016473) #18	CCNL1 (ENSBBBG00000007697) #20	PTX3 (ENSBBBG00000016521) #22	VEPH1 (ENSBBBG00000000755) #21	SHOX2 (ENSBBBG00000004093) #25	RSRC1 (ENSBBBG00000016710) #26	MLF1 (ENSBBBG00000016820) #27	ENSBBBG00000016835 #29	GFM1 (ENSBBBG00000016884) #28	RARRES1 (ENSBBBG00000007038) #30	MFSD1 (ENSBBBG00000016915) #31	ENSBBBG00000016927	IQCJ (ENSBBBG00000006892)	SCHIP1 (ENSBBBG00000017002) #32	IL12A (ENSBBBG00000017024) #34	C3orf80 (ENSBBBG00000004213) #35	IFT80 (ENSBBBG00000017101) #36	SMC4 (ENSBBBG00000017274) #37
Siberian musk deer	MODERN SPECIES	1182													ENSMMSG00000011343 #18	CCNL1 (ENSMMSG00000011205) #20	ENSMMSG00000011178	PTX3 (ENSMMSG00000011155) #22	VEPH1 (ENSMMSG00000011108) #21	SHOX2 (ENSMMSG00000011069) #25	RSRC1 (ENSMMSG00000011042) #26	MLF1 (ENSMMSG00000010771) #27	LXN (ENSMMSG00000010700) #29	GFM1 (ENSMMSG00000010573) #28	RARRES1 (ENSMMSG00000010545) #30	MFSD1 (ENSMMSG00000010205) #31	ENSMMSG00000010154	IQCJ (ENSMMSG00000010113)	ENSMMSG00000009957 #32	IL12A (ENSMMSG00000009883) #34	ENSMMSG00000009838	C3orf80 (ENSMMSG00000009824) #35	IFT80 (ENSMMSG00000009699) #36
Yarkand deer	MODERN SPECIES	10	ARHGEF26 (ENSCHYG00000007452)	DHX36 (ENSCHYG00000007110)	GPR149 (ENSCHYG00000007062) #7	MME (ENSCHYG00000006865) #8	ENSCHYG00000006823	PLCH1 (ENSCHYG00000006524) #10	C3orf33 (ENSCHYG00000006450) #11	SLC33A1 (ENSCHYG00000006374) #12	ENSCHYG00000006350	GMPS (ENSCHYG00000006185) #13	KCNAB1 (ENSCHYG00000005549) #15	SSR3 (ENSCHYG00000005427) #16	TIPARP (ENSCHYG00000005381) #17	LEKR1 (ENSCHYG00000005267) #18	CCNL1 (ENSCHYG00000005169) #20	PTX3 (ENSCHYG00000019896) #22	VEPH1 (ENSCHYG00000019688) #21	SHOX2 (ENSCHYG00000019538) #25	RSRC1 (ENSCHYG00000019368) #26	MLF1 (ENSCHYG00000018977) #27	GFM1 (ENSCHYG00000018556) #28	RARRES1 (ENSCHYG00000018389) #30	MFSD1 (ENSCHYG00000017875) #31	ENSCHYG00000017805	IQCJ (ENSCHYG00000017742)	ENSCHYG00000017273 #32	IL12A (ENSCHYG00000017138) #34	ENSCHYG00000016946	ENSCHYG00000016898	C3orf80 (ENSCHYG00000016866) #35	IFT80 (ENSCHYG00000016614) #36
Camelidae	ANCESTRAL SPECIES		ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00440000033499 #36
Arabian camel	MODERN SPECIES		ARHGEF26 (ENSCDRG00005000067)	DHX36 (ENSCDRG00005000096)	GPR149 (ENSCDRG00005000230) #7	MME (ENSCDRG00005000270) #8	STRIT1 (ENSCDRG00005000324) #9	PLCH1 (ENSCDRG00005000373) #10	C3orf33 (ENSCDRG00005000461) #11	SLC33A1 (ENSCDRG00005000479) #12	GMPS (ENSCDRG00005000518) #13	KCNAB1 (ENSCDRG00005000711) #15	SSR3 (ENSCDRG00005001758) #16	TIPARP (ENSCDRG00005001771) #17	LEKR1 (ENSCDRG00005001799) #18	CCNL1 (ENSCDRG00005001866) #20	VEPH1 (ENSCDRG00005001946) #21	PTX3 (ENSCDRG00005002009) #22	ENSCDRG00005002025	SHOX2 (ENSCDRG00005002041) #25	RSRC1 (ENSCDRG00005002140) #26	MLF1 (ENSCDRG00005002182) #27	GFM1 (ENSCDRG00005002271) #28	LXN (ENSCDRG00005002303) #29	RARRES1 (ENSCDRG00005002318) #30	MFSD1 (ENSCDRG00005002341) #31	ENSCDRG00005002572	IQCJ (ENSCDRG00005002586)	ENSCDRG00005002633 #32	IL12A (ENSCDRG00005002981) #34	ENSCDRG00005003063	ENSCDRG00005003086	IFT80 (ENSCDRG00005003106) #36
Alpaca	MODERN SPECIES	2648															VEPH1 (ENSVPAG00000010429) #21	PTX3 (ENSVPAG00000010431) #22	RSRC1 (ENSVPAG00000010432) #26
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Equus	ANCESTRAL SPECIES	78										ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b.e #29	ENSGT00530000063813.a #30	ENSGT00390000011700.d #31
Donkey	MODERN SPECIES	25	TRIM59 (ENSEASG00005034852)	SMC4 (ENSEASG00005019735) #37	IFT80 (ENSEASG00005019604) #36	C3orf80 (ENSEASG00005019594) #35	ENSEASG00005019592	IL12A (ENSEASG00005019588) #34	ENSEASG00005019584 #32	IQCJ (ENSEASG00005033866)	ENSEASG00005019578 #31	ENSEASG00005012411 #15	ENSEASG00005026558 #16	TIPARP (ENSEASG00005012401) #17	LEKR1 (ENSEASG00005012389) #18	CCNL1 (ENSEASG00005012383) #20	VEPH1 (ENSEASG00005012366) #21	PTX3 (ENSEASG00005026603) #22	SHOX2 (ENSEASG00005012352) #25	RSRC1 (ENSEASG00005030784) #26	MLF1 (ENSEASG00005012340) #27	GFM1 (ENSEASG00005029932) #28	LXN (ENSEASG00005028111) #29	RARRES1 (ENSEASG00005033961) #30	ENSEASG00005026105 #31	ENSEASG00005018669	ENSEASG00005037509	ENSEASG00005026850	NMD3 (ENSEASG00005018672)	SPTSSB (ENSEASG00005029208)	OTOL1 (ENSEASG00005018674)	ENSEASG00005018675	SI (ENSEASG00005020052)
Horse	MODERN SPECIES	10								KCNAB1 (ENSECAG00000006802) #15	ENSECAG00000059269	SSR3 (ENSECAG00000023239) #16	TIPARP (ENSECAG00000024048) #17	ENSECAG00000045368	ENSECAG00000006496 #18	CCNL1 (ENSECAG00000008851) #20	VEPH1 (ENSECAG00000010484) #21	PTX3 (ENSECAG00000038866) #22	SHOX2 (ENSECAG00000015571) #25	RSRC1 (ENSECAG00000032191) #26	MLF1 (ENSECAG00000016503) #27	ENSECAG00000051675 #28	ENSECAG00000052824	ENSECAG00000045693	ENSECAG00000059152	ENSECAG00000050043	ENSECAG00000044078	ENSECAG00000059240	ENSECAG00000045896	ARL14 (ENSECAG00000007772)	ENSECAG00000056203	KPNA4 (ENSECAG00000023235)	TRIM59 (ENSECAG00000007762)
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Megabat	MODERN SPECIES	3079															VEPH1 (ENSPVAG00000014534) #21	PTX3 (ENSPVAG00000014535) #22
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Microbat	MODERN SPECIES	1007	DHX36 (ENSMLUG00000002318)	GPR149 (ENSMLUG00000012000) #7	MME (ENSMLUG00000014941) #8	ENSMLUG00000027166	ENSMLUG00000005520 #10	C3orf33 (ENSMLUG00000026622) #11	SLC33A1 (ENSMLUG00000001019) #12	ENSMLUG00000024763	GMPS (ENSMLUG00000015442) #13	KCNAB1 (ENSMLUG00000015462) #15	SSR3 (ENSMLUG00000015478) #16	ENSMLUG00000009885	TIPARP (ENSMLUG00000006995) #17	LEKR1 (ENSMLUG00000012119) #18	CCNL1 (ENSMLUG00000015049) #20	PTX3 (ENSMLUG00000000487) #22	VEPH1 (ENSMLUG00000000477) #21	SHOX2 (ENSMLUG00000024898) #25	MLF1 (ENSMLUG00000000447) #27	LXN (ENSMLUG00000000462) #29	GFM1 (ENSMLUG00000000452) #28	RARRES1 (ENSMLUG00000000467) #30	MFSD1 (ENSMLUG00000001574) #31	ENSMLUG00000016328	IQCJ (ENSMLUG00000029191)	SCHIP1 (ENSMLUG00000028779) #32	IL12A (ENSMLUG00000014101) #34	ENSMLUG00000028009	ENSMLUG00000025073
Greater horseshoe bat	MODERN SPECIES	11	RAP2B (ENSRFEG00010005627)	ARHGEF26 (ENSRFEG00010005586)	DHX36 (ENSRFEG00010005520)	GPR149 (ENSRFEG00010005464) #7	MME (ENSRFEG00010005413) #8	STRIT1 (ENSRFEG00010005386) #9	PLCH1 (ENSRFEG00010005294) #10	SLC33A1 (ENSRFEG00010005239) #12	GMPS (ENSRFEG00010005175) #13	ENSRFEG00010005149	KCNAB1 (ENSRFEG00010005060) #15	SSR3 (ENSRFEG00010005041) #16	TIPARP (ENSRFEG00010005035) #17	LEKR1 (ENSRFEG00010005022) #18	CCNL1 (ENSRFEG00010004998) #20	PTX3 (ENSRFEG00010004987) #22	VEPH1 (ENSRFEG00010004933) #21	SHOX2 (ENSRFEG00010003974) #25	RSRC1 (ENSRFEG00010003927) #26	MLF1 (ENSRFEG00010003832) #27	LXN (ENSRFEG00010003785) #29	GFM1 (ENSRFEG00010003742) #28	RARRES1 (ENSRFEG00010003709) #30	MFSD1 (ENSRFEG00010003647) #31	ENSRFEG00010003605	ENSRFEG00010003578	IQCJ (ENSRFEG00010003545)	ENSRFEG00010003468 #32	IL12A (ENSRFEG00010003390) #34	ENSRFEG00010003324	C3orf80 (ENSRFEG00010003281) #35
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Panthera	ANCESTRAL SPECIES	12	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
Tiger	MODERN SPECIES	242	P2RY1 (ENSPTIG00000002203)	ARHGEF26 (ENSPTIG00000021954)	DHX36 (ENSPTIG00000018478)	GPR149 (ENSPTIG00000017502) #7	MME (ENSPTIG00000016196) #8	STRIT1 (ENSPTIG00000010401) #9	PLCH1 (ENSPTIG00000015618) #10	C3orf33 (ENSPTIG00000014993) #11	SLC33A1 (ENSPTIG00000014526) #12	GMPS (ENSPTIG00000012623) #13	KCNAB1 (ENSPTIG00000018164) #15	SSR3 (ENSPTIG00000016314) #16	TIPARP (ENSPTIG00000014258) #17	LEKR1 (ENSPTIG00000013039) #18	CCNL1 (ENSPTIG00000011507) #20	PTX3 (ENSPTIG00000011127) #22	VEPH1 (ENSPTIG00000007873) #21	ENSPTIG00000007545	SHOX2 (ENSPTIG00000002610) #25	RSRC1 (ENSPTIG00000017358) #26	MLF1 (ENSPTIG00000014178) #27	LXN (ENSPTIG00000013811) #29	GFM1 (ENSPTIG00000012416) #28	RARRES1 (ENSPTIG00000012044) #30	MFSD1 (ENSPTIG00000004131) #31	IQCJ (ENSPTIG00000000535)	ENSPTIG00000021983	SCHIP1 (ENSPTIG00000021584) #32	IL12A (ENSPTIG00000019184) #34	IFT80 (ENSPTIG00000017853) #36	SMC4 (ENSPTIG00000009501) #37
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000167272	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35
leopard	MODERN SPECIES	5	ARHGEF26 (ENSPPRG00000003558)	DHX36 (ENSPPRG00000002879)	GPR149 (ENSPPRG00000023313) #7	MME (ENSPPRG00000023388) #8	STRIT1 (ENSPPRG00000023798) #9	PLCH1 (ENSPPRG00000023905) #10	C3orf33 (ENSPPRG00000024803) #11	SLC33A1 (ENSPPRG00000024861) #12	GMPS (ENSPPRG00000024889) #13	KCNAB1 (ENSPPRG00000024997) #15	SSR3 (ENSPPRG00000018310) #16	TIPARP (ENSPPRG00000017076) #17	LEKR1 (ENSPPRG00000016442) #18	CCNL1 (ENSPPRG00000015223) #20	VEPH1 (ENSPPRG00000014553) #21	PTX3 (ENSPPRG00000013280) #22	ENSPPRG00000013159	SHOX2 (ENSPPRG00000012987) #25	RSRC1 (ENSPPRG00000012590) #26	ENSPPRG00000010610	MLF1 (ENSPPRG00000010057) #27	GFM1 (ENSPPRG00000009281) #28	LXN (ENSPPRG00000008785) #29	RARRES1 (ENSPPRG00000008712) #30	MFSD1 (ENSPPRG00000008502) #31	IQCJ (ENSPPRG00000007765)	ENSPPRG00000007336 #32	ENSPPRG00000006249	IL12A (ENSPPRG00000005897) #34	ENSPPRG00000005383	C3orf80 (ENSPPRG00000021909) #35
lion	MODERN SPECIES	9	ARHGEF26 (ENSPLOG00000009339)	DHX36 (ENSPLOG00000009521)	GPR149 (ENSPLOG00000009781) #7	MME (ENSPLOG00000009835) #8	STRIT1 (ENSPLOG00000009947) #9	PLCH1 (ENSPLOG00000010097) #10	C3orf33 (ENSPLOG00000010806) #11	SLC33A1 (ENSPLOG00000010862) #12	GMPS (ENSPLOG00000010967) #13	KCNAB1 (ENSPLOG00000011367) #15	SSR3 (ENSPLOG00000012356) #16	TIPARP (ENSPLOG00000012424) #17	LEKR1 (ENSPLOG00000012490) #18	CCNL1 (ENSPLOG00000012698) #20	VEPH1 (ENSPLOG00000012921) #21	PTX3 (ENSPLOG00000013109) #22	SHOX2 (ENSPLOG00000013339) #25	RSRC1 (ENSPLOG00000013528) #26	ENSPLOG00000013628	MLF1 (ENSPLOG00000013649) #27	GFM1 (ENSPLOG00000013707) #28	LXN (ENSPLOG00000013849) #29	RARRES1 (ENSPLOG00000014023) #30	MFSD1 (ENSPLOG00000014116) #31	ENSPLOG00000014403	IQCJ (ENSPLOG00000014473)	ENSPLOG00000014648 #32	ENSPLOG00000015276	IL12A (ENSPLOG00000015377) #34	ENSPLOG00000015446	C3orf80 (ENSPLOG00000015469) #35
Cat	MODERN SPECIES	240	ARHGEF26 (ENSFCAG00000028110)	DHX36 (ENSFCAG00000004860)	GPR149 (ENSFCAG00000004861) #7	MME (ENSFCAG00000004615) #8	STRIT1 (ENSFCAG00000046459) #9	PLCH1 (ENSFCAG00000012834) #10	CC2H3orf33 (ENSFCAG00000044100) #11	SLC33A1 (ENSFCAG00000027140) #12	GMPS (ENSFCAG00000025327) #13	KCNAB1 (ENSFCAG00000005945) #15	SSR3 (ENSFCAG00000028606) #16	TIPARP (ENSFCAG00000013314) #17	LEKR1 (ENSFCAG00000025717) #18	CCNL1 (ENSFCAG00000005138) #20	ENSFCAG00000047506	PTX3 (ENSFCAG00000003464) #22	VEPH1 (ENSFCAG00000015589) #21	SHOX2 (ENSFCAG00000037357) #25	ENSFCAG00000051036	RSRC1 (ENSFCAG00000013290) #26	MLF1 (ENSFCAG00000022176) #27	LXN (ENSFCAG00000013292) #29	GFM1 (ENSFCAG00000013291) #28	ENSFCAG00000053294	RARRES1 (ENSFCAG00000046780) #30	MFSD1 (ENSFCAG00000025464) #31	ENSFCAG00000007832	ENSFCAG00000035937	ENSFCAG00000026679 #32	IL12A (ENSFCAG00000011130) #34	ENSFCAG00000047334
Caniformia	ANCESTRAL SPECIES		ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00720000110080	ENSGT00390000005823 #35
Canidae	ANCESTRAL SPECIES	24	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.a.a ##16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00550000074851	ENSGT00940000159619.a
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.a.a ##16	ENSGT00390000000970.a.b.a ##16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000178902	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00550000074851	ENSGT00940000159619.a
Dog	MODERN SPECIES	15	DHX36 (ENSCAFG00845020573)	GPR149 (ENSCAFG00845020850) #7	MME (ENSCAFG00845020957) #8	STRIT1 (ENSCAFG00845021186) #9	PLCH1 (ENSCAFG00845021263) #10	ENSCAFG00845021471	C3orf33 (ENSCAFG00845021566) #11	SLC33A1 (ENSCAFG00845021734) #12	GMPS (ENSCAFG00845021930) #13	KCNAB1 (ENSCAFG00845022469) #15	ENSCAFG00845023016 ##16	TIPARP (ENSCAFG00845023055) #17	LEKR1 (ENSCAFG00845023191) #18	CCNL1 (ENSCAFG00845023534) #20	VEPH1 (ENSCAFG00845023758) #21	ENSCAFG00845024115 #22	SHOX2 (ENSCAFG00845024168) #25	RSRC1 (ENSCAFG00845024332) #26	MLF1 (ENSCAFG00845024615) #27	GFM1 (ENSCAFG00845024782) #28	LXN (ENSCAFG00845024952) #29	ENSCAFG00845025008 #30	OPA1 (ENSCAFG00845025222)	HES1 (ENSCAFG00845025905)
Dingo	MODERN SPECIES	115	DHX36 (ENSCAFG00020004966)	GPR149 (ENSCAFG00020005372) #7	ENSCAFG00020005378 #8	ENSCAFG00020005383 #8	PLCH1 (ENSCAFG00020005412) #10	C3orf33 (ENSCAFG00020005555) #11	SLC33A1 (ENSCAFG00020005560) #12	GMPS (ENSCAFG00020005568) #13	KCNAB1 (ENSCAFG00020005593) #15	ENSCAFG00020005601	ENSCAFG00020005606 ##16	TIPARP (ENSCAFG00020005619) #17	ENSCAFG00020005632	LEKR1 (ENSCAFG00020005636) #18	CCNL1 (ENSCAFG00020005656) #20	ENSCAFG00020005804 #22	ENSCAFG00020005806	SHOX2 (ENSCAFG00020005811) #25	RSRC1 (ENSCAFG00020005818) #26	ENSCAFG00020005828	GFM1 (ENSCAFG00020005878) #28	LXN (ENSCAFG00020007353) #29	RARRES1 (ENSCAFG00020007356) #30	OPA1 (ENSCAFG00020007538)	ENSCAFG00020011672	ASB12 (ENSCAFG00020011674)	ARHGEF9 (ENSCAFG00020011678)
Red fox	MODERN SPECIES	56	CD36 (ENSVVUG00000019582)	SEMA3C (ENSVVUG00000019617)	ENSVVUG00000019629	HGF (ENSVVUG00000019636)	CACNA2D1 (ENSVVUG00000019647)	PCLO (ENSVVUG00000019718)	ENSVVUG00000019825 #11	SLC33A1 (ENSVVUG00000019826) #12	GMPS (ENSVVUG00000019829) #13	KCNAB1 (ENSVVUG00000019840) #15	ENSVVUG00000019852 ##16	TIPARP (ENSVVUG00000019862) #17	LEKR1 (ENSVVUG00000019882) #18	CCNL1 (ENSVVUG00000019906) #20	ENSVVUG00000020028 #21	ENSVVUG00000020034 #22	ENSVVUG00000020036 #21	SHOX2 (ENSVVUG00000020055) #25	ENSVVUG00000020061	ENSVVUG00000020068	MLF1 (ENSVVUG00000020071) #27	GFM1 (ENSVVUG00000020091) #28	LXN (ENSVVUG00000020273) #29	ENSVVUG00000020274 #30	OPA1 (ENSVVUG00000020418)	HES1 (ENSVVUG00000025249)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Mustelinae	ANCESTRAL SPECIES	59	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT00390000018660 #21	ENSGT01100000263515.a.b.a.a #22	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00390000007739.e
American mink	MODERN SPECIES	228										KCNAB1 (ENSNVIG00000018556) #15	SSR3 (ENSNVIG00000018782) #16	TIPARP (ENSNVIG00000018807) #17	LEKR1 (ENSNVIG00000018848) #18	CCNL1 (ENSNVIG00000018919) #20	VEPH1 (ENSNVIG00000018973) #21	PTX3 (ENSNVIG00000019067) #22	SHOX2 (ENSNVIG00000019086) #25	RSRC1 (ENSNVIG00000019133) #26	MLF1 (ENSNVIG00000019251) #27	GFM1 (ENSNVIG00000019403) #28	ENSNVIG00000019454 #29	RARRES1 (ENSNVIG00000019465) #30	MFSD1 (ENSNVIG00000019471) #31	ENSNVIG00000019488
Ferret	MODERN SPECIES	211	DHX36 (ENSMPUG00000002723)	GPR149 (ENSMPUG00000002729) #7	ENSMPUG00000002741	MME (ENSMPUG00000002746) #8	PLCH1 (ENSMPUG00000002757) #10	C3orf33 (ENSMPUG00000002773) #11	SLC33A1 (ENSMPUG00000002776) #12	GMPS (ENSMPUG00000002781) #13	ENSMPUG00000002788	KCNAB1 (ENSMPUG00000002795) #15	SSR3 (ENSMPUG00000002806) #16	TIPARP (ENSMPUG00000002811) #17	ENSMPUG00000002816 #18	CCNL1 (ENSMPUG00000002825) #20	VEPH1 (ENSMPUG00000002831) #21	PTX3 (ENSMPUG00000002835) #22	SHOX2 (ENSMPUG00000002839) #25	RSRC1 (ENSMPUG00000002851) #26	MLF1 (ENSMPUG00000002854) #27	GFM1 (ENSMPUG00000002859) #28	LXN (ENSMPUG00000002863) #29	RARRES1 (ENSMPUG00000002867) #30	MFSD1 (ENSMPUG00000002871) #31	ENSMPUG00000002880	IQCJ (ENSMPUG00000002883)	ENSMPUG00000002888	SCHIP1 (ENSMPUG00000002891) #32	ENSMPUG00000002894	IL12A (ENSMPUG00000002896) #34	ENSMPUG00000002900	ENSMPUG00000002908
Ursidae	ANCESTRAL SPECIES	1	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745.d #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Ursus	ANCESTRAL SPECIES	14	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745.d #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00440000033499 #36	ENSGT00900000141094 #37
American black bear	MODERN SPECIES	5085																PTX3 (ENSUAMG00000008222) #22	ENSUAMG00000008223 #21
Polar bear	MODERN SPECIES	112	DHX36 (ENSUMAG00000011908)	GPR149 (ENSUMAG00000011899) #7	ENSUMAG00000011884 #8	ENSUMAG00000011878 #8	ENSUMAG00000011864	PLCH1 (ENSUMAG00000011780) #10	C3orf33 (ENSUMAG00000011751) #11	SLC33A1 (ENSUMAG00000011735) #12	GMPS (ENSUMAG00000011640) #13	KCNAB1 (ENSUMAG00000011542) #15	SSR3 (ENSUMAG00000011504) #16	TIPARP (ENSUMAG00000011453) #17	ENSUMAG00000011444	ENSUMAG00000011399 #18	CCNL1 (ENSUMAG00000011392) #20	ENSUMAG00000011385 #22	VEPH1 (ENSUMAG00000011364) #21	ENSUMAG00000011328 #25	RSRC1 (ENSUMAG00000011315) #26	MLF1 (ENSUMAG00000011284) #27	LXN (ENSUMAG00000011274) #29	GFM1 (ENSUMAG00000011268) #28	RARRES1 (ENSUMAG00000011267) #30	ENSUMAG00000011265	MFSD1 (ENSUMAG00000011253) #31	IQCJ (ENSUMAG00000011226)	SCHIP1 (ENSUMAG00000011209) #32	IL12A (ENSUMAG00000011206) #34	ENSUMAG00000011202	IFT80 (ENSUMAG00000011195) #36	ENSUMAG00000011157
Giant Panda	MODERN SPECIES		ARHGEF26 (ENSAMEG00000011755)	DHX36 (ENSAMEG00000011721)	GPR149 (ENSAMEG00000011712) #7	MME (ENSAMEG00000001740) #8	STRIT1 (ENSAMEG00000024481) #9	PLCH1 (ENSAMEG00000002608) #10	C3orf33 (ENSAMEG00000024093) #11	SLC33A1 (ENSAMEG00000002592) #12	GMPS (ENSAMEG00000002551) #13	KCNAB1 (ENSAMEG00000003137) #15	SSR3 (ENSAMEG00000030214) #16	ENSAMEG00000018879	TIPARP (ENSAMEG00000003118) #17	LEKR1 (ENSAMEG00000003113) #18	CCNL1 (ENSAMEG00000003092) #20	PTX3 (ENSAMEG00000013511) #22	VEPH1 (ENSAMEG00000003085) #21	SHOX2 (ENSAMEG00000013513) #25	RSRC1 (ENSAMEG00000029988) #26	MLF1 (ENSAMEG00000013527) #27	LXN (ENSAMEG00000013580) #29	GFM1 (ENSAMEG00000013542) #28	RARRES1 (ENSAMEG00000013589) #30	MFSD1 (ENSAMEG00000013606) #31	ENSAMEG00000030171	IQCJ (ENSAMEG00000013634)	ENSAMEG00000014596 #32	ENSAMEG00000003144 #34	ENSAMEG00000031019	C3orf80 (ENSAMEG00000030959) #35	IFT80 (ENSAMEG00000002218) #36
Atlantogenata	ANCESTRAL SPECIES	45	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00940000164641	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Xenarthra	ANCESTRAL SPECIES	142					ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00940000164641	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b
Sloth	MODERN SPECIES	13202																ENSCHOG00000006284 #22
Armadillo	MODERN SPECIES	1154	C3orf33 (ENSDNOG00000031969) #11	SLC33A1 (ENSDNOG00000045008) #12	ENSDNOG00000040652	GMPS (ENSDNOG00000017772) #13	ENSDNOG00000019348	ENSDNOG00000038913	KCNAB1 (ENSDNOG00000000745) #15	ENSDNOG00000000752 #16	ENSDNOG00000048811	TIPARP (ENSDNOG00000006676) #17	ENSDNOG00000046381	ENSDNOG00000031446	ENSDNOG00000039650 #18	CCNL1 (ENSDNOG00000009325) #20	ENSDNOG00000031998	PTX3 (ENSDNOG00000036438) #22	VEPH1 (ENSDNOG00000015818) #21	ENSDNOG00000009228	SHOX2 (ENSDNOG00000000888) #25	ENSDNOG00000031677	MLF1 (ENSDNOG00000008671) #27	LXN (ENSDNOG00000039413) #29	ENSDNOG00000016385 #28	RARRES1 (ENSDNOG00000016391) #30	ENSDNOG00000038632	MFSD1 (ENSDNOG00000005048) #31	ENSDNOG00000033357
Afrotheria	ANCESTRAL SPECIES	59	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00940000164641	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Afrotheria_a	ANCESTRAL SPECIES	57	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000165173	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00940000164641	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000160146.C
Elephant	MODERN SPECIES	383	ENSLAFG00000011446	DHX36 (ENSLAFG00000015342)	GPR149 (ENSLAFG00000015353) #7	MME (ENSLAFG00000015397) #8	PLCH1 (ENSLAFG00000001248) #10	C3orf33 (ENSLAFG00000015059) #11	SLC33A1 (ENSLAFG00000015062) #12	GMPS (ENSLAFG00000012230) #13	ENSLAFG00000010095	KCNAB1 (ENSLAFG00000014751) #15	SSR3 (ENSLAFG00000014757) #16	TIPARP (ENSLAFG00000008210) #17	ENSLAFG00000029018	ENSLAFG00000014510 #18	CCNL1 (ENSLAFG00000007715) #20	PTX3 (ENSLAFG00000011043) #22	VEPH1 (ENSLAFG00000011038) #21	ENSLAFG00000000904	SHOX2 (ENSLAFG00000017816) #25	ENSLAFG00000017819	MLF1 (ENSLAFG00000010939) #27	LXN (ENSLAFG00000010951) #29	GFM1 (ENSLAFG00000010945) #28	RARRES1 (ENSLAFG00000010960) #30	MFSD1 (ENSLAFG00000008125) #31	ENSLAFG00000025702	IQCJ (ENSLAFG00000020769)	SCHIP1 (ENSLAFG00000018474) #32	IL12A (ENSLAFG00000001089) #34	IFT80 (ENSLAFG00000017096) #36	SMC4 (ENSLAFG00000017104) #37
Hyrax	MODERN SPECIES	6858															VEPH1 (ENSPCAG00000003214) #21	PTX3 (ENSPCAG00000003280) #22
Tenrec	MODERN SPECIES	5482																ENSETEG00000007633 #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Opossum	MODERN SPECIES	6	RAP2B (ENSMODG00000024599)	ARHGEF26 (ENSMODG00000015830)	DHX36 (ENSMODG00000015820)	GPR149 (ENSMODG00000015808) #7	MME (ENSMODG00000015805) #8	PLCH1 (ENSMODG00000015790) #10	SLC33A1 (ENSMODG00000015775) #12	GMPS (ENSMODG00000015770) #13	VN2R653 (ENSMODG00000015766)	KCNAB1 (ENSMODG00000015758) #15	SSR3 (ENSMODG00000015747) #16	TIPARP (ENSMODG00000015744) #17	LEKR1 (ENSMODG00000015743) #18	CCNL1 (ENSMODG00000015703) #20	ENSMODG00000024619	PTX3 (ENSMODG00000015690) #22	VEPH1 (ENSMODG00000015689) #21	SHOX2 (ENSMODG00000048794) #25	RSRC1 (ENSMODG00000015684) #26	MLF1 (ENSMODG00000015680) #27	LXN (ENSMODG00000015677) #29	GFM1 (ENSMODG00000015673) #28	ENSMODG00000038088	IFT80 (ENSMODG00000016334) #36	ENSMODG00000016488 #37	ENSMODG00000027514	ENSMODG00000016325	ENSMODG00000048403	ENSMODG00000016324	ENSMODG00000018630	KPNA4 (ENSMODG00000016320)
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000166505 #9	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00550000074911 #28	ENSGT00530000063813.b #29	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36	ENSGT00900000141094 #37	ENSGT00940000162903.f.b
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715 #7	ENSGT00940000156745 #8	ENSGT00940000157185 #10	ENSGT00390000004493 #11	ENSGT00940000154019.a #12	ENSGT00390000006591 #13	ENSGT00940000160473	ENSGT00940000156760 #15	ENSGT00390000000970.b #16	ENSGT00940000155368 #17	ENSGT00940000164154	ENSGT00940000162647 #18	ENSGT00940000159135 #20	ENSGT01100000263515.a.b.a.a #22	ENSGT00390000018660 #21	ENSGT00940000154287.b #25	ENSGT00730000111251 #26	ENSGT00390000005023.b #27	ENSGT00530000063813.b #29	ENSGT00550000074911 #28	ENSGT00530000063813.a #30	ENSGT00390000011700 #31	ENSGT01030000234621.C.b	ENSGT00390000000847	ENSGT00390000011127 #32	ENSGT00390000016906 #34	ENSGT00650000094113	ENSGT00390000005823 #35	ENSGT00440000033499 #36
Common wonbat	MODERN SPECIES	1046	DHX36 (ENSVURG00010017291)	GPR149 (ENSVURG00010017273) #7	MME (ENSVURG00010017187) #8	ENSVURG00010017174	PLCH1 (ENSVURG00010017004) #10	ENSVURG00010016972 #11	SLC33A1 (ENSVURG00010016955) #12	GMPS (ENSVURG00010016941) #13	ENSVURG00010016928	KCNAB1 (ENSVURG00010016914) #15	SSR3 (ENSVURG00010016903) #16	TIPARP (ENSVURG00010016896) #17	ENSVURG00010016886	ENSVURG00010016876 #18	CCNL1 (ENSVURG00010016857) #20	PTX3 (ENSVURG00010016844) #22	VEPH1 (ENSVURG00010016819) #21	SHOX2 (ENSVURG00010016800) #25	RSRC1 (ENSVURG00010016788) #26	MLF1 (ENSVURG00010016775) #27	ENSVURG00010016763 #29	GFM1 (ENSVURG00010016730) #28	RARRES1 (ENSVURG00010016715) #30	MFSD1 (ENSVURG00010016698) #31	ENSVURG00010016688	IQCJ (ENSVURG00010016672)	ENSVURG00010016645 #32	IL12A (ENSVURG00010016620) #34	ENSVURG00010016584	C3orf80 (ENSVURG00010016571) #35	IFT80 (ENSVURG00010016526) #36
koala	MODERN SPECIES	33	DHX36 (ENSPCIG00000000045)	GPR149 (ENSPCIG00000000044) #7	MME (ENSPCIG00000000041) #8	PLCH1 (ENSPCIG00000000039) #10	C3orf33 (ENSPCIG00000000038) #11	SLC33A1 (ENSPCIG00000000037) #12	GMPS (ENSPCIG00000000036) #13	ENSPCIG00000000035	ENSPCIG00000037318	KCNAB1 (ENSPCIG00000003598) #15	ENSPCIG00000003630 ##16	TIPARP (ENSPCIG00000003641) #17	ENSPCIG00000003648	ENSPCIG00000031903 #18	ENSPCIG00000003670 #20	PTX3 (ENSPCIG00000036781) #22	VEPH1 (ENSPCIG00000003684) #21	SHOX2 (ENSPCIG00000001160) #25	RSRC1 (ENSPCIG00000032999) #26	MLF1 (ENSPCIG00000020160) #27	LXN (ENSPCIG00000022681) #29	GFM1 (ENSPCIG00000020195) #28	RARRES1 (ENSPCIG00000000244) #30	MFSD1 (ENSPCIG00000004651) #31	ENSPCIG00000005197	ENSPCIG00000033482	ENSPCIG00000000154 #32	IL12A (ENSPCIG00000007582) #34	ENSPCIG00000007589	IFT80 (ENSPCIG00000028664) #36	SMC4 (ENSPCIG00000028662) #37
Wallaby	MODERN SPECIES	6842															VEPH1 (ENSMEUG00000011998) #21	PTX3 (ENSMEUG00000012019) #22
Tasmanian devil	MODERN SPECIES	2	DHX36 (ENSSHAG00000016292)	GPR149 (ENSSHAG00000029857) #7	MME (ENSSHAG00000013418) #8	STRIT1 (ENSSHAG00000031937) #9	PLCH1 (ENSSHAG00000012063) #10	ENSSHAG00000028439 #11	SLC33A1 (ENSSHAG00000029855) #12	GMPS (ENSSHAG00000010345) #13	ENSSHAG00000009677	KCNAB1 (ENSSHAG00000004797) #15	SSR3 (ENSSHAG00000023585) #16	TIPARP (ENSSHAG00000028913) #17	ENSSHAG00000026588 #18	CCNL1 (ENSSHAG00000018819) #20	VEPH1 (ENSSHAG00000018730) #21	PTX3 (ENSSHAG00000032216) #22	ENSSHAG00000025260 #25	RSRC1 (ENSSHAG00000021746) #26	MLF1 (ENSSHAG00000017825) #27	GFM1 (ENSSHAG00000017772) #28	LXN (ENSSHAG00000023262) #29	ENSSHAG00000025059 #30	MFSD1 (ENSSHAG00000031081) #31	ENSSHAG00000028509	ENSSHAG00000023699 #32	IL12A (ENSSHAG00000004838) #34	ENSSHAG00000021892	C3orf80 (ENSSHAG00000026896) #35	IFT80 (ENSSHAG00000017271) #36	SMC4 (ENSSHAG00000017214) #37	ENSSHAG00000024143
Platypus	MODERN SPECIES		ENSOANG00000050093	B3GNT5 (ENSOANG00000009184)	RFC4 (ENSOANG00000048018)	EIF4A2 (ENSOANG00000042142)	ENSOANG00000043705	ENSOANG00000042947	ENSOANG00000036092	AHSG (ENSOANG00000046335)	FARSB (ENSOANG00000015387)	SGPP2 (ENSOANG00000001427)	ENSOANG00000046117	PAX3 (ENSOANG00000007096)	EPHA4 (ENSOANG00000010961)	CCNL1 (ENSOANG00000014356) #20	VEPH1 (ENSOANG00000046560) #21	PTX3 (ENSOANG00000047492) #22	ENSOANG00000022394 #23	SHOX2 (ENSOANG00000049436) #25	RSRC1 (ENSOANG00000020697) #26	MLF1 (ENSOANG00000049528) #27	GFM1 (ENSOANG00000021192) #28	LXN (ENSOANG00000009904) #29	ENSOANG00000022160 #30	MFSD1 (ENSOANG00000008987) #31	ENSOANG00000050117	IQCJ (ENSOANG00000021066)	ENSOANG00000008700 #32	ENSOANG00000002081 #34	ENSOANG00000039342	IFT80 (ENSOANG00000029045) #36	SMC4 (ENSOANG00000010917) #37