Vertebrata ANCESTRAL SPECIES 148 ENSGT00390000005678 ENSGT01100000263515 #22 ENSGT00940000158458 #23 Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 66 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00940000163876 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885 ENSGT00390000000087 ENSGT00390000002918.a.a ENSGT00390000000022.a ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a ENSGT00940000165626 ENSGT00940000160939 Euteleostomi ANCESTRAL SPECIES 320 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 ENSGT00940000160939 Sarcopterygii ANCESTRAL SPECIES 309 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 Tetrapoda ANCESTRAL SPECIES 53 ENSGT00390000014091 ENSGT01020000230401.b.b ENSGT00940000155364 ENSGT00940000155577 ENSGT00940000157834 ENSGT00390000015189 ENSGT00940000158383 ENSGT00390000012037 ENSGT00940000156606 ENSGT00940000159318 ENSGT00940000155280 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 Amniota ANCESTRAL SPECIES 121 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 Mammalia ANCESTRAL SPECIES 43 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000160374 ENSGT00940000155267 ENSGT00510000049125 ENSGT00550000075071 ENSGT00390000002628 ENSGT00940000156278 Theria ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 Eutheria ANCESTRAL SPECIES 23 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 ENSGT00940000159920 #36 Boreoeutheria ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 Euarchontoglires ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Primates ANCESTRAL SPECIES 11 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 Haplorrhini ANCESTRAL SPECIES 24 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 Simiiformes ANCESTRAL SPECIES 19 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000162207 Platyrrhini ANCESTRAL SPECIES 32 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.j.b.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Cebidae ANCESTRAL SPECIES 16 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.j.b.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207.d ENSGT00940000164974 #32 ENSGT00940000162207.c ENSGT00940000163349 #33 ENSGT00940000156666 #34 Cebidae_a ANCESTRAL SPECIES 15 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.j.b.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207.d ENSGT00940000164974 #32 ENSGT00940000162207.c ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Bolivian squirrel monkey MODERN SPECIES 71 ENSSBOG00000012975 #7 FAHD1 (ENSSBOG00000033711) #8 HAGH (ENSSBOG00000027026) #9 IGFALS (ENSSBOG00000033879) #10 NUBP2 (ENSSBOG00000000048) #11 SPSB3 (ENSSBOG00000031939) #12 EME2 (ENSSBOG00000031994) #13 MRPS34 (ENSSBOG00000022248) #14 NME3 (ENSSBOG00000035930) #15 MAPK8IP3 (ENSSBOG00000032195) #16 JPT2 (ENSSBOG00000021481) #17 CRAMP1 (ENSSBOG00000032950) #18 TMEM204 (ENSSBOG00000023717) #19 IFT140 (ENSSBOG00000021449) #20 TELO2 (ENSSBOG00000031314) #21 PTX4 (ENSSBOG00000024401) #22 CLCN7 (ENSSBOG00000021371) #23 CCDC154 (ENSSBOG00000033270) #24 UQCC4 (ENSSBOG00000018977) #25 UNKL (ENSSBOG00000031173) #26 GNPTG (ENSSBOG00000023025) #27 TSR3 (ENSSBOG00000020595) #28 BAIAP3 (ENSSBOG00000018805) #29 ENSSBOG00000028070 #30 ENSSBOG00000009155 #31 ENSSBOG00000025605 #32 TPSG1 (ENSSBOG00000020761) #33 CACNA1H (ENSSBOG00000019467) #34 C1QTNF8 (ENSSBOG00000031870) #35 SOX8 (ENSSBOG00000032429) #36 LMF1 (ENSSBOG00000031806) #37 Capuchin MODERN SPECIES 444 MEIOB (ENSCCAG00000025134) #7 FAHD1 (ENSCCAG00000027433) #8 HAGH (ENSCCAG00000024223) #9 IGFALS (ENSCCAG00000024463) #10 NUBP2 (ENSCCAG00000024752) #11 SPSB3 (ENSCCAG00000028227) #12 EME2 (ENSCCAG00000027956) #13 MRPS34 (ENSCCAG00000021752) #14 NME3 (ENSCCAG00000035080) #15 MAPK8IP3 (ENSCCAG00000026687) #16 JPT2 (ENSCCAG00000025880) #17 CRAMP1 (ENSCCAG00000022072) #18 TMEM204 (ENSCCAG00000022468) #19 IFT140 (ENSCCAG00000019829) #20 TELO2 (ENSCCAG00000023349) #21 PTX4 (ENSCCAG00000014809) #22 CLCN7 (ENSCCAG00000020383) #23 CCDC154 (ENSCCAG00000036580) #24 C16orf91 (ENSCCAG00000036104) #25 UNKL (ENSCCAG00000022808) #26 GNPTG (ENSCCAG00000033363) #27 TSR3 (ENSCCAG00000034922) #28 BAIAP3 (ENSCCAG00000014999) #29 ENSCCAG00000009138 ##30 ENSCCAG00000036726 #31 ENSCCAG00000026358 ENSCCAG00000029560 TPSG1 (ENSCCAG00000026315) #33 CACNA1H (ENSCCAG00000023719) #34 C1QTNF8 (ENSCCAG00000031548) #35 SOX8 (ENSCCAG00000024300) #36 Marmoset MODERN SPECIES 3 AMDHD2 (ENSCJAG00000014876) PDPK1 (ENSCJAG00000014801) KCTD5 (ENSCJAG00000042757) PRSS27 (ENSCJAG00000074570) ENSCJAG00000014767 #7 FAHD1 (ENSCJAG00000014764) #8 HAGH (ENSCJAG00000014745) #9 MRPS34 (ENSCJAG00000014694) #14 NME3 (ENSCJAG00000014687) #15 MAPK8IP3 (ENSCJAG00000053951) #16 ENSCJAG00000014626 #17 CRAMP1 (ENSCJAG00000014596) #18 TMEM204 (ENSCJAG00000014588) #19 IFT140 (ENSCJAG00000014532) #20 TELO2 (ENSCJAG00000014499) #21 PTX4 (ENSCJAG00000014497) #22 CLCN7 (ENSCJAG00000014423) #23 CCDC154 (ENSCJAG00000014379) #24 PERCC1 (ENSCJAG00000038190) UQCC4 (ENSCJAG00000014406) #25 UNKL (ENSCJAG00000013151) #26 GNPTG (ENSCJAG00000013166) #27 TSR3 (ENSCJAG00000013185) #28 BAIAP3 (ENSCJAG00000013194) #29 UBE2I (ENSCJAG00000043035) #30 ENSCJAG00000013282 TPSG1 (ENSCJAG00000013318) #33 CACNA1H (ENSCJAG00000013323) #34 C1QTNF8 (ENSCJAG00000002657) #35 SSTR5 (ENSCJAG00000002659) SOX8 (ENSCJAG00000073860) #36 Mas night monkey MODERN SPECIES 1162 ENSANAG00000033819 #7 ENSANAG00000034768 #8 HAGH (ENSANAG00000020735) #9 ENSANAG00000019351 #8 IGFALS (ENSANAG00000026151) #10 NUBP2 (ENSANAG00000026789) #11 SPSB3 (ENSANAG00000028700) #12 MAPK8IP3 (ENSANAG00000035325) #16 MRPS34 (ENSANAG00000021904) #14 NME3 (ENSANAG00000023706) #15 JPT2 (ENSANAG00000026079) #17 CRAMP1 (ENSANAG00000027271) #18 IFT140 (ENSANAG00000033226) #20 TMEM204 (ENSANAG00000034748) #19 TELO2 (ENSANAG00000035480) #21 PTX4 (ENSANAG00000035628) #22 CLCN7 (ENSANAG00000037591) #23 CCDC154 (ENSANAG00000020546) #24 UQCC4 (ENSANAG00000021620) #25 UNKL (ENSANAG00000021942) #26 GNPTG (ENSANAG00000021857) #27 TSR3 (ENSANAG00000023143) #28 BAIAP3 (ENSANAG00000026454) #29 ENSANAG00000019349 #30 ADI1 (ENSANAG00000023261) RNASEH1 (ENSANAG00000024055) ENSANAG00000025380 COLEC11 (ENSANAG00000027990) ALLC (ENSANAG00000031020) DCDC2C (ENSANAG00000030597) SOX11 (ENSANAG00000019575) Catarrhini ANCESTRAL SPECIES 11 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 Cercopithecidae ANCESTRAL SPECIES 8 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 Cercopithecinae ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 Cercopithecinae_a ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.e.b #31 ENSGT00940000158868.e.a #31 ENSGT00940000158868.f #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 Macaca ANCESTRAL SPECIES 8 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.e.b #31 ENSGT00940000158868.e.a #31 ENSGT00940000158868.f #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 Pig-tailed macaque MODERN SPECIES 124 ENSMNEG00000004327 #7 FAHD1 (ENSMNEG00000042967) #8 HAGH (ENSMNEG00000044613) #9 IGFALS (ENSMNEG00000032413) #10 NUBP2 (ENSMNEG00000042575) #11 SPSB3 (ENSMNEG00000043847) #12 EME2 (ENSMNEG00000028998) #13 MRPS34 (ENSMNEG00000040928) #14 NME3 (ENSMNEG00000016858) #15 MAPK8IP3 (ENSMNEG00000034470) #16 JPT2 (ENSMNEG00000034006) #17 CRAMP1 (ENSMNEG00000032283) #18 IFT140 (ENSMNEG00000001208) #20 TMEM204 (ENSMNEG00000029407) #19 TELO2 (ENSMNEG00000030153) #21 PTX4 (ENSMNEG00000003932) #22 CLCN7 (ENSMNEG00000032889) #23 CCDC154 (ENSMNEG00000041464) #24 PERCC1 (ENSMNEG00000002629) UQCC4 (ENSMNEG00000032053) #25 UNKL (ENSMNEG00000036131) #26 GNPTG (ENSMNEG00000038413) #27 TSR3 (ENSMNEG00000038392) #28 BAIAP3 (ENSMNEG00000028463) #29 UBE2I (ENSMNEG00000041643) #30 ENSMNEG00000044556 TPSD1 (ENSMNEG00000029318) ENSMNEG00000039038 #32 TPSG1 (ENSMNEG00000043978) #33 CACNA1H (ENSMNEG00000036229) #34 C1QTNF8 (ENSMNEG00000045208) #35 Macaca_a ANCESTRAL SPECIES 25 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.a.a.a.b.b.b.a ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.e.b #31 ENSGT00940000158868.e.a #31 ENSGT00940000158868.f #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 Rhesus MODERN SPECIES 12 HAGH (ENSMMUG00000000737) #9 IGFALS (ENSMMUG00000018598) #10 NUBP2 (ENSMMUG00000018597) #11 SPSB3 (ENSMMUG00000060350) #12 EME2 (ENSMMUG00000060835) #13 MRPS34 (ENSMMUG00000018594) #14 NME3 (ENSMMUG00000003857) #15 MAPK8IP3 (ENSMMUG00000017496) #16 JPT2 (ENSMMUG00000000979) #17 ENSMMUG00000059063 CRAMP1 (ENSMMUG00000000978) #18 TMEM204 (ENSMMUG00000062198) #19 IFT140 (ENSMMUG00000000044) #20 TELO2 (ENSMMUG00000008119) #21 ENSMMUG00000050070 PTX4 (ENSMMUG00000062229) #22 CCDC154 (ENSMMUG00000021102) #24 CLCN7 (ENSMMUG00000021518) #23 ENSMMUG00000061546 UNKL (ENSMMUG00000012440) #26 GNPTG (ENSMMUG00000012439) #27 TSR3 (ENSMMUG00000006428) #28 UBE2I (ENSMMUG00000044277) #30 ENSMMUG00000050892 #31 ENSMMUG00000047001 #31 ENSMMUG00000043574 #31 ENSMMUG00000063334 ENSMMUG00000053253 TPSD1 (ENSMMUG00000003108) ENSMMUG00000015103 #32 TPSG1 (ENSMMUG00000000392) #33 Crab-eating macaque MODERN SPECIES 12 FAHD1 (ENSMFAG00000037024) #8 HAGH (ENSMFAG00000004030) #9 IGFALS (ENSMFAG00000042039) #10 SPSB3 (ENSMFAG00000031888) #12 NUBP2 (ENSMFAG00000037059) #11 EME2 (ENSMFAG00000026250) #13 MRPS34 (ENSMFAG00000046146) #14 MAPK8IP3 (ENSMFAG00000037276) #16 ENSMFAG00000060156 JPT2 (ENSMFAG00000033861) #17 CRAMP1 (ENSMFAG00000002985) #18 TMEM204 (ENSMFAG00000032333) #19 IFT140 (ENSMFAG00000038575) #20 TELO2 (ENSMFAG00000037116) #21 ENSMFAG00000058884 PTX4 (ENSMFAG00000031460) #22 CCDC154 (ENSMFAG00000000761) #24 CLCN7 (ENSMFAG00000031886) #23 ENSMFAG00000059912 #25 ENSMFAG00000064676 #26 GNPTG (ENSMFAG00000031980) #27 TSR3 (ENSMFAG00000031171) #28 BAIAP3 (ENSMFAG00000001912) #29 UBE2I (ENSMFAG00000044410) #30 ENSMFAG00000054924 #31 ENSMFAG00000065039 #31 ENSMFAG00000043936 #31 ENSMFAG00000056548 ENSMFAG00000043887 ENSMFAG00000043035 #32 TPSG1 (ENSMFAG00000035519) #33 Cercopithecinae_b ANCESTRAL SPECIES 5 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.e.b #31 ENSGT00940000158868.e.a #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 Olive baboon MODERN SPECIES 9 ENSPANG00000034551 #7 FAHD1 (ENSPANG00000015411) #8 HAGH (ENSPANG00000000459) #9 IGFALS (ENSPANG00000005022) #10 NUBP2 (ENSPANG00000017597) #11 SPSB3 (ENSPANG00000018349) #12 EME2 (ENSPANG00000015752) #13 MRPS34 (ENSPANG00000020905) #14 NME3 (ENSPANG00000017598) #15 MAPK8IP3 (ENSPANG00000018354) #16 JPT2 (ENSPANG00000016521) #17 CRAMP1 (ENSPANG00000017496) #18 IFT140 (ENSPANG00000018206) #20 TMEM204 (ENSPANG00000018087) #19 TELO2 (ENSPANG00000026315) #21 PTX4 (ENSPANG00000021087) #22 CLCN7 (ENSPANG00000019552) #23 CCDC154 (ENSPANG00000019550) #24 UQCC4 (ENSPANG00000021088) #25 UNKL (ENSPANG00000015754) #26 GNPTG (ENSPANG00000016391) #27 TSR3 (ENSPANG00000006419) #28 UBE2I (ENSPANG00000030254) #30 ENSPANG00000017868 #31 ENSPANG00000017869 #31 ENSPANG00000043739 #31 Cercopithecinae_d ANCESTRAL SPECIES 65 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.e.a #31 ENSGT00940000163159.b.a ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 Sooty mangabey MODERN SPECIES 104 ENSCATG00000013960 #7 FAHD1 (ENSCATG00000024626) #8 HAGH (ENSCATG00000031808) #9 IGFALS (ENSCATG00000038603) #10 NUBP2 (ENSCATG00000032660) #11 SPSB3 (ENSCATG00000014492) #12 EME2 (ENSCATG00000034726) #13 MRPS34 (ENSCATG00000017392) #14 NME3 (ENSCATG00000031446) #15 MAPK8IP3 (ENSCATG00000037988) #16 JPT2 (ENSCATG00000039325) #17 CRAMP1 (ENSCATG00000039680) #18 IFT140 (ENSCATG00000035856) #20 TMEM204 (ENSCATG00000041448) #19 TELO2 (ENSCATG00000031718) #21 PTX4 (ENSCATG00000041551) #22 CLCN7 (ENSCATG00000013101) #23 CCDC154 (ENSCATG00000039677) #24 PERCC1 (ENSCATG00000014112) UQCC4 (ENSCATG00000017665) #25 UNKL (ENSCATG00000033183) #26 GNPTG (ENSCATG00000040204) #27 TSR3 (ENSCATG00000002510) #28 BAIAP3 (ENSCATG00000044317) #29 UBE2I (ENSCATG00000038133) #30 ENSCATG00000035675 #31 ENSCATG00000037735 TPSD1 (ENSCATG00000038349) ENSCATG00000036021 #32 TPSG1 (ENSCATG00000037946) #33 CACNA1H (ENSCATG00000037439) #34 Drill MODERN SPECIES 1516 ENSMLEG00000035652 #7 FAHD1 (ENSMLEG00000026819) #8 HAGH (ENSMLEG00000042252) #9 IGFALS (ENSMLEG00000040910) #10 NUBP2 (ENSMLEG00000028983) #11 SPSB3 (ENSMLEG00000032836) #12 EME2 (ENSMLEG00000044276) #13 MRPS34 (ENSMLEG00000028354) #14 ENSMLEG00000038547 #15 MAPK8IP3 (ENSMLEG00000034940) #16 JPT2 (ENSMLEG00000030463) #17 CRAMP1 (ENSMLEG00000040080) #18 TMEM204 (ENSMLEG00000040932) #19 IFT140 (ENSMLEG00000035964) #20 TELO2 (ENSMLEG00000035497) #21 PTX4 (ENSMLEG00000042635) #22 CLCN7 (ENSMLEG00000027830) #23 CCDC154 (ENSMLEG00000005828) #24 UQCC4 (ENSMLEG00000035865) #25 UNKL (ENSMLEG00000037946) #26 GNPTG (ENSMLEG00000035838) #27 TSR3 (ENSMLEG00000030991) #28 BAIAP3 (ENSMLEG00000043092) #29 UBE2I (ENSMLEG00000037403) #30 TPSD1 (ENSMLEG00000040956) ENSMLEG00000037488 #32 TPSG1 (ENSMLEG00000041326) #33 CACNA1H (ENSMLEG00000024043) #34 C1QTNF8 (ENSMLEG00000036555) #35 SSTR5 (ENSMLEG00000042124) SOX8 (ENSMLEG00000038862) #36 Vervet Monkey MODERN SPECIES 24 ENSCSAG00000011268 #7 FAHD1 (ENSCSAG00000018842) #8 HAGH (ENSCSAG00000011337) #9 IGFALS (ENSCSAG00000011362) #10 NUBP2 (ENSCSAG00000011369) #11 SPSB3 (ENSCSAG00000011396) #12 EME2 (ENSCSAG00000011426) #13 MRPS34 (ENSCSAG00000011443) #14 NME3 (ENSCSAG00000011458) #15 MAPK8IP3 (ENSCSAG00000011484) #16 JPT2 (ENSCSAG00000011502) #17 CRAMP1 (ENSCSAG00000011519) #18 TMEM204 (ENSCSAG00000011531) #19 IFT140 (ENSCSAG00000011558) #20 TELO2 (ENSCSAG00000011579) #21 PTX4 (ENSCSAG00000011586) #22 CLCN7 (ENSCSAG00000011607) #23 CCDC154 (ENSCSAG00000011633) #24 UQCC4 (ENSCSAG00000011651) #25 UNKL (ENSCSAG00000011709) #26 GNPTG (ENSCSAG00000011737) #27 TSR3 (ENSCSAG00000011742) #28 BAIAP3 (ENSCSAG00000011761) #29 UBE2I (ENSCSAG00000011775) #30 ENSCSAG00000011780 TPSD1 (ENSCSAG00000011820) ENSCSAG00000011838 #32 TPSG1 (ENSCSAG00000011847) #33 CACNA1H (ENSCSAG00000011870) #34 C1QTNF8 (ENSCSAG00000011883) #35 SSTR5 (ENSCSAG00000018841) Rhinopithecus ANCESTRAL SPECIES 14 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 ENSGT00940000160265 ENSGT00940000159920 #36 Black snub-nosed monkey MODERN SPECIES 1929 HS3ST6 (ENSRBIG00000044265) ENSRBIG00000030178 #7 HAGH (ENSRBIG00000034228) #9 IGFALS (ENSRBIG00000037270) #10 NUBP2 (ENSRBIG00000031416) #11 SPSB3 (ENSRBIG00000039428) #12 EME2 (ENSRBIG00000032429) #13 MRPS34 (ENSRBIG00000030707) #14 NME3 (ENSRBIG00000031631) #15 MAPK8IP3 (ENSRBIG00000044410) #16 JPT2 (ENSRBIG00000041459) #17 CRAMP1 (ENSRBIG00000031863) #18 TMEM204 (ENSRBIG00000033674) #19 IFT140 (ENSRBIG00000040322) #20 TELO2 (ENSRBIG00000038822) #21 PTX4 (ENSRBIG00000027792) #22 CLCN7 (ENSRBIG00000039539) #23 CCDC154 (ENSRBIG00000040319) #24 UQCC4 (ENSRBIG00000038097) #25 UNKL (ENSRBIG00000040235) #26 GNPTG (ENSRBIG00000034109) #27 TSR3 (ENSRBIG00000043958) #28 BAIAP3 (ENSRBIG00000031600) #29 UBE2I (ENSRBIG00000013186) #30 ENSRBIG00000044236 #32 TPSG1 (ENSRBIG00000041776) #33 CACNA1H (ENSRBIG00000028318) #34 C1QTNF8 (ENSRBIG00000036447) #35 SSTR5 (ENSRBIG00000035056) SOX8 (ENSRBIG00000040054) #36 LMF1 (ENSRBIG00000037476) #37 Golden snub-nosed monkey MODERN SPECIES 2643 ENSRROG00000023184 #7 FAHD1 (ENSRROG00000033003) #8 HAGH (ENSRROG00000032851) #9 IGFALS (ENSRROG00000042451) #10 NUBP2 (ENSRROG00000045209) #11 SPSB3 (ENSRROG00000044609) #12 EME2 (ENSRROG00000043980) #13 MRPS34 (ENSRROG00000028689) #14 ENSRROG00000035949 #15 MAPK8IP3 (ENSRROG00000045499) #16 JPT2 (ENSRROG00000025417) #17 CRAMP1 (ENSRROG00000043453) #18 TMEM204 (ENSRROG00000043665) #19 IFT140 (ENSRROG00000015287) #20 TELO2 (ENSRROG00000028637) #21 PTX4 (ENSRROG00000043040) #22 CLCN7 (ENSRROG00000041929) #23 CCDC154 (ENSRROG00000044225) #24 UQCC4 (ENSRROG00000041801) #25 UNKL (ENSRROG00000029341) #26 GNPTG (ENSRROG00000035086) #27 TSR3 (ENSRROG00000042532) #28 BAIAP3 (ENSRROG00000031004) #29 UBE2I (ENSRROG00000044039) #30 TPSD1 (ENSRROG00000043542) ENSRROG00000035736 #32 TPSG1 (ENSRROG00000026922) #33 CACNA1H (ENSRROG00000008261) #34 C1QTNF8 (ENSRROG00000035549) #35 SSTR5 (ENSRROG00000034422) SOX8 (ENSRROG00000038995) #36 Hominoidea ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452.m #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Hominidae ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452.m #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 24 ENSGT00390000001723 #7 ENSGT00940000160452.m #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Gorilla MODERN SPECIES 7 ENSGGOG00000012261 #7 FAHD1 (ENSGGOG00000024697) #8 HAGH (ENSGGOG00000012252) #9 IGFALS (ENSGGOG00000006268) #10 NUBP2 (ENSGGOG00000006254) #11 SPSB3 (ENSGGOG00000006245) #12 EME2 (ENSGGOG00000006238) #13 MRPS34 (ENSGGOG00000006234) #14 NME3 (ENSGGOG00000006229) #15 MAPK8IP3 (ENSGGOG00000006208) #16 JPT2 (ENSGGOG00000006200) #17 CRAMP1 (ENSGGOG00000006181) #18 TMEM204 (ENSGGOG00000005903) #19 IFT140 (ENSGGOG00000005889) #20 TELO2 (ENSGGOG00000005878) #21 PTX4 (ENSGGOG00000005872) #22 ENSGGOG00000014942 #23 CCDC154 (ENSGGOG00000014932) #24 PERCC1 (ENSGGOG00000014929) UQCC4 (ENSGGOG00000036674) #25 UNKL (ENSGGOG00000014915) #26 ENSGGOG00000040860 GNPTG (ENSGGOG00000016320) #27 TSR3 (ENSGGOG00000011679) #28 BAIAP3 (ENSGGOG00000011646) #29 UBE2I (ENSGGOG00000042163) #30 TPSD1 (ENSGGOG00000014066) TPSG1 (ENSGGOG00000014055) #33 CACNA1H (ENSGGOG00000014033) #34 C1QTNF8 (ENSGGOG00000027309) #35 ENSGGOG00000041631 Homo/Pan group ANCESTRAL SPECIES 23 ENSGT00390000001723 #7 ENSGT00940000160452.m #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000165532 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 Human MODERN SPECIES 7 MEIOB (ENSG00000162039) #7 FAHD1 (ENSG00000180185) #8 HAGH (ENSG00000063854) #9 IGFALS (ENSG00000099769) #10 NUBP2 (ENSG00000095906) #11 SPSB3 (ENSG00000162032) #12 EME2 (ENSG00000197774) #13 MRPS34 (ENSG00000074071) #14 NME3 (ENSG00000103024) #15 MAPK8IP3 (ENSG00000138834) #16 JPT2 (ENSG00000206053) #17 CRAMP1 (ENSG00000007545) #18 TMEM204 (ENSG00000131634) #19 IFT140 (ENSG00000187535) #20 TELO2 (ENSG00000100726) #21 PTX4 (ENSG00000251692) #22 CLCN7 (ENSG00000103249) #23 CCDC154 (ENSG00000197599) #24 PERCC1 (ENSG00000284395) UQCC4 (ENSG00000174109) #25 UNKL (ENSG00000059145) #26 GNPTG (ENSG00000090581) #27 TSR3 (ENSG00000007520) #28 BAIAP3 (ENSG00000007516) #29 UBE2I (ENSG00000103275) #30 TPSD1 (ENSG00000095917) TPSAB1 (ENSG00000172236) #32 TPSB2 (ENSG00000197253) #32 TPSG1 (ENSG00000116176) #33 CACNA1H (ENSG00000196557) #34 C1QTNF8 (ENSG00000184471) #35 Pan ANCESTRAL SPECIES 28 ENSGT00390000001723 #7 ENSGT00940000160452.m #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000164974 #32 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00940000163090 #35 ENSGT00940000160265 Chimpanzee MODERN SPECIES 7 MEIOB (ENSPTRG00000007612) #7 FAHD1 (ENSPTRG00000046890) #8 HAGH (ENSPTRG00000007611) #9 IGFALS (ENSPTRG00000007610) #10 NUBP2 (ENSPTRG00000007609) #11 SPSB3 (ENSPTRG00000007608) #12 EME2 (ENSPTRG00000007607) #13 MRPS34 (ENSPTRG00000007606) #14 NME3 (ENSPTRG00000007605) #15 MAPK8IP3 (ENSPTRG00000007603) #16 JPT2 (ENSPTRG00000034459) #17 CRAMP1 (ENSPTRG00000007602) #18 TMEM204 (ENSPTRG00000031314) #19 IFT140 (ENSPTRG00000007600) #20 TELO2 (ENSPTRG00000007596) #21 PTX4 (ENSPTRG00000007595) #22 CLCN7 (ENSPTRG00000007594) #23 CCDC154 (ENSPTRG00000023886) #24 PERCC1 (ENSPTRG00000052156) UQCC4 (ENSPTRG00000007592) #25 UNKL (ENSPTRG00000007591) #26 ENSPTRG00000049802 GNPTG (ENSPTRG00000007590) #27 TSR3 (ENSPTRG00000007589) #28 BAIAP3 (ENSPTRG00000007588) #29 UBE2I (ENSPTRG00000007587) #30 TPSB2 (ENSPTRG00000007584) #32 TPSG1 (ENSPTRG00000052026) #33 CACNA1H (ENSPTRG00000007580) #34 C1QTNF8 (ENSPTRG00000007577) #35 SSTR5 (ENSPTRG00000044619) Bonobo MODERN SPECIES 7 ENSPPAG00000031640 HS3ST6 (ENSPPAG00000029952) ENSPPAG00000032337 #7 IGFALS (ENSPPAG00000025910) #10 ENSPPAG00000029613 #11 SPSB3 (ENSPPAG00000023101) #12 EME2 (ENSPPAG00000035754) #13 MRPS34 (ENSPPAG00000033749) #14 NME3 (ENSPPAG00000030073) #15 MAPK8IP3 (ENSPPAG00000034790) #16 JPT2 (ENSPPAG00000034952) #17 CRAMP1 (ENSPPAG00000036103) #18 TMEM204 (ENSPPAG00000033773) #19 IFT140 (ENSPPAG00000041233) #20 TELO2 (ENSPPAG00000031847) #21 PTX4 (ENSPPAG00000012282) #22 CLCN7 (ENSPPAG00000035677) #23 CCDC154 (ENSPPAG00000039800) #24 PERCC1 (ENSPPAG00000011265) UQCC4 (ENSPPAG00000035290) #25 UNKL (ENSPPAG00000043365) #26 ENSPPAG00000032844 GNPTG (ENSPPAG00000040528) #27 ENSPPAG00000032379 #28 BAIAP3 (ENSPPAG00000029908) #29 UBE2I (ENSPPAG00000011896) #30 ENSPPAG00000042671 #32 TPSD1 (ENSPPAG00000040532) TPSG1 (ENSPPAG00000037940) #33 CACNA1H (ENSPPAG00000034389) #34 C1QTNF8 (ENSPPAG00000030379) #35 Orangutan MODERN SPECIES 7 ENSPPYG00000006968 #7 FAHD1 (ENSPPYG00000037970) #8 HAGH (ENSPPYG00000006966) #9 IGFALS (ENSPPYG00000006965) #10 ENSPPYG00000006964 #11 SPSB3 (ENSPPYG00000006963) #12 EME2 (ENSPPYG00000035411) #13 MRPS34 (ENSPPYG00000006962) #14 NME3 (ENSPPYG00000032952) #15 MAPK8IP3 (ENSPPYG00000006960) #16 JPT2 (ENSPPYG00000006959) #17 CRAMP1 (ENSPPYG00000006958) #18 TMEM204 (ENSPPYG00000006957) #19 IFT140 (ENSPPYG00000006956) #20 TELO2 (ENSPPYG00000006955) #21 PTX4 (ENSPPYG00000035702) #22 CLCN7 (ENSPPYG00000006954) #23 CCDC154 (ENSPPYG00000006953) #24 PERCC1 (ENSPPYG00000006952) UQCC4 (ENSPPYG00000006951) #25 UNKL (ENSPPYG00000006950) #26 GNPTG (ENSPPYG00000006949) #27 TSR3 (ENSPPYG00000034811) #28 ENSPPYG00000035138 #30 TPSD1 (ENSPPYG00000006943) ENSPPYG00000007748 #32 TPSG1 (ENSPPYG00000006942) #33 CACNA1H (ENSPPYG00000006941) #34 C1QTNF8 (ENSPPYG00000006940) #35 SSTR5 (ENSPPYG00000006939) SOX8 (ENSPPYG00000006937) #36 Gibbon MODERN SPECIES 8 ENSNLEG00000008811 #7 FAHD1 (ENSNLEG00000008809) #8 ENSNLEG00000008791 #9 ENSNLEG00000030061 NUBP2 (ENSNLEG00000008782) #11 SPSB3 (ENSNLEG00000031220) #12 EME2 (ENSNLEG00000008769) #13 MRPS34 (ENSNLEG00000008766) #14 NME3 (ENSNLEG00000008754) #15 MAPK8IP3 (ENSNLEG00000026706) #16 ENSNLEG00000029033 CRAMP1 (ENSNLEG00000008491) #18 IFT140 (ENSNLEG00000008705) #20 TMEM204 (ENSNLEG00000008742) #19 TELO2 (ENSNLEG00000008667) #21 ENSNLEG00000028593 #22 ENSNLEG00000008654 #23 CCDC154 (ENSNLEG00000008642) #24 ENSNLEG00000030883 UQCC4 (ENSNLEG00000034051) #25 UNKL (ENSNLEG00000008624) #26 ENSNLEG00000008616 #27 ENSNLEG00000029520 #28 BAIAP3 (ENSNLEG00000008558) #29 UBE2I (ENSNLEG00000008525) #30 ENSNLEG00000008523 #33 ENSNLEG00000030455 #34 ENSNLEG00000008522 #35 ENSNLEG00000031104 SOX8 (ENSNLEG00000008488) #36 LMF1 (ENSNLEG00000008453) #37 Tarsier MODERN SPECIES 6596 HS3ST6 (ENSTSYG00000026580) ENSTSYG00000007030 #7 FAHD1 (ENSTSYG00000007002) #8 HAGH (ENSTSYG00000006985) #9 IGFALS (ENSTSYG00000034727) #10 NUBP2 (ENSTSYG00000033549) #11 SPSB3 (ENSTSYG00000033584) #12 EME2 (ENSTSYG00000030413) #13 MRPS34 (ENSTSYG00000031660) #14 MAPK8IP3 (ENSTSYG00000025647) #16 JPT2 (ENSTSYG00000002923) #17 CRAMP1 (ENSTSYG00000002901) #18 TMEM204 (ENSTSYG00000006646) #19 IFT140 (ENSTSYG00000006588) #20 TELO2 (ENSTSYG00000014612) #21 PTX4 (ENSTSYG00000033919) #22 CLCN7 (ENSTSYG00000033315) #23 CCDC154 (ENSTSYG00000036155) #24 CUNH16orf91 (ENSTSYG00000030140) #25 UNKL (ENSTSYG00000033619) #26 ENSTSYG00000026873 TSR3 (ENSTSYG00000026081) #28 BAIAP3 (ENSTSYG00000029544) #29 UBE2I (ENSTSYG00000028221) #30 ENSTSYG00000034985 Strepsirrhini ANCESTRAL SPECIES 24 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B Lemuriformes ANCESTRAL SPECIES 27 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.k.a #30 ENSGT00940000158868 #31 ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B Mouse lemur MODERN SPECIES 8 ENSMICG00000037918 ENSMICG00000011322 #7 FAHD1 (ENSMICG00000002137) #8 HAGH (ENSMICG00000002132) #9 IGFALS (ENSMICG00000002129) #10 NUBP2 (ENSMICG00000002126) #11 SPSB3 (ENSMICG00000002122) #12 MRPS34 (ENSMICG00000031095) #14 NME3 (ENSMICG00000030545) #15 MAPK8IP3 (ENSMICG00000002091) #16 JPT2 (ENSMICG00000026714) #17 CRAMP1 (ENSMICG00000014094) #18 TMEM204 (ENSMICG00000042845) #19 IFT140 (ENSMICG00000014051) #20 TELO2 (ENSMICG00000000220) #21 PTX4 (ENSMICG00000000217) #22 CLCN7 (ENSMICG00000013205) #23 CCDC154 (ENSMICG00000013192) #24 UQCC4 (ENSMICG00000047600) #25 UNKL (ENSMICG00000007141) #26 GNPTG (ENSMICG00000047931) #27 TSR3 (ENSMICG00000045072) #28 BAIAP3 (ENSMICG00000031314) #29 UBE2I (ENSMICG00000030413) #30 ENSMICG00000004987 ENSMICG00000006833 TPSG1 (ENSMICG00000045902) #33 CACNA1H (ENSMICG00000027405) #34 TEKT4 (ENSMICG00000037206) C1QTNF8 (ENSMICG00000005932) #35 SOX8 (ENSMICG00000011516) #36 Lemuriformes_a ANCESTRAL SPECIES 23 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652.i #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00940000169717 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.k.a #30 ENSGT00940000158868 #31 ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00550000076453 Coquerels sifaka MODERN SPECIES 384 ENSPCOG00000002540 #7 FAHD1 (ENSPCOG00000007621) #8 HAGH (ENSPCOG00000026794) #9 IGFALS (ENSPCOG00000012687) #10 NUBP2 (ENSPCOG00000018600) #11 SPSB3 (ENSPCOG00000015385) #12 EME2 (ENSPCOG00000021099) #13 MRPS34 (ENSPCOG00000026798) #14 NME3 (ENSPCOG00000019193) #15 MAPK8IP3 (ENSPCOG00000021523) #16 ENSPCOG00000028105 #17 CRAMP1 (ENSPCOG00000004847) #18 TMEM204 (ENSPCOG00000027514) #19 IFT140 (ENSPCOG00000023133) #20 TELO2 (ENSPCOG00000022795) #21 PTX4 (ENSPCOG00000025173) #22 CLCN7 (ENSPCOG00000023505) #23 CCDC154 (ENSPCOG00000027402) #24 PERCC1 (ENSPCOG00000019562) UQCC4 (ENSPCOG00000017870) #25 UNKL (ENSPCOG00000017889) #26 ENSPCOG00000005384 GNPTG (ENSPCOG00000015436) #27 TSR3 (ENSPCOG00000027967) #28 BAIAP3 (ENSPCOG00000021367) #29 ENSPCOG00000021941 #30 ENSPCOG00000021989 ENSPCOG00000004340 #33 ENSPCOG00000021145 #33 CACNA1H (ENSPCOG00000024375) #34 TEKT4 (ENSPCOG00000012465) Greater bamboo lemur MODERN SPECIES 390 FAHD1 (ENSPSMG00000024285) #8 HAGH (ENSPSMG00000024311) #9 ENSPSMG00000024318 IGFALS (ENSPSMG00000024321) #10 NUBP2 (ENSPSMG00000024328) #11 SPSB3 (ENSPSMG00000024361) #12 EME2 (ENSPSMG00000024369) #13 MRPS34 (ENSPSMG00000024379) #14 NME3 (ENSPSMG00000024387) #15 MAPK8IP3 (ENSPSMG00000024595) #16 JPT2 (ENSPSMG00000024685) #17 CRAMP1 (ENSPSMG00000024711) #18 IFT140 (ENSPSMG00000024730) #20 TMEM204 (ENSPSMG00000024736) #19 TELO2 (ENSPSMG00000024784) #21 PTX4 (ENSPSMG00000024796) #22 CLCN7 (ENSPSMG00000024837) #23 CCDC154 (ENSPSMG00000024847) #24 UQCC4 (ENSPSMG00000024850) #25 UNKL (ENSPSMG00000024857) #26 ENSPSMG00000024860 TSR3 (ENSPSMG00000024865) #28 ENSPSMG00000024876 UBE2I (ENSPSMG00000024884) #30 ENSPSMG00000024893 #31 Bushbaby MODERN SPECIES 159 HS3ST6 (ENSOGAG00000010083) FAHD1 (ENSOGAG00000012662) #8 HAGH (ENSOGAG00000012660) #9 IGFALS (ENSOGAG00000012659) #10 NUBP2 (ENSOGAG00000012655) #11 SPSB3 (ENSOGAG00000027372) #12 EME2 (ENSOGAG00000012649) #13 MRPS34 (ENSOGAG00000012647) #14 NME3 (ENSOGAG00000026071) #15 MAPK8IP3 (ENSOGAG00000012639) #16 CRAMP1 (ENSOGAG00000001253) #18 TMEM204 (ENSOGAG00000001249) #19 JPT2 (ENSOGAG00000012638) #17 IFT140 (ENSOGAG00000001245) #20 TELO2 (ENSOGAG00000004371) #21 PTX4 (ENSOGAG00000032762) #22 CLCN7 (ENSOGAG00000004362) #23 CCDC154 (ENSOGAG00000001438) #24 UQCC4 (ENSOGAG00000029437) #25 UNKL (ENSOGAG00000027777) #26 GNPTG (ENSOGAG00000001435) #27 TSR3 (ENSOGAG00000001433) #28 UBE2I (ENSOGAG00000001428) #30 ENSOGAG00000032629 #31 ENSOGAG00000012923 ENSOGAG00000032452 TPSG1 (ENSOGAG00000012919) #33 CACNA1H (ENSOGAG00000012907) #34 BAIAP3 (ENSOGAG00000001430) #29 TEKT4 (ENSOGAG00000025332) C1QTNF8 (ENSOGAG00000009850) #35 Euarchontoglires_A ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Tree shrew MODERN SPECIES 3531 PTX4 (ENSTBEG00000008879) #22 Glires ANCESTRAL SPECIES 11 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Lagomorpha ANCESTRAL SPECIES 288 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 Pika MODERN SPECIES 3444 ENSOPRG00000014984 #22 GNPTG (ENSOPRG00000014967) #27 TSR3 (ENSOPRG00000014954) #28 BAIAP3 (ENSOPRG00000014899) #29 Rabbit MODERN SPECIES 804 ENSOCUG00000035472 CRAMP1 (ENSOCUG00000004975) #18 TMEM204 (ENSOCUG00000001136) #19 IFT140 (ENSOCUG00000024268) #20 TELO2 (ENSOCUG00000000521) #21 PTX4 (ENSOCUG00000027299) #22 Rodentia ANCESTRAL SPECIES 11 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Rodentia_B ANCESTRAL SPECIES 15 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Kangaroo rat MODERN SPECIES 333 Msrb1 (ENSDORG00000025189) Hs3st6 (ENSDORG00000023206) Meiob (ENSDORG00000012742) #7 Hagh (ENSDORG00000009673) #9 Igfals (ENSDORG00000009672) #10 Nubp2 (ENSDORG00000009670) #11 Spsb3 (ENSDORG00000009668) #12 ENSDORG00000027160 #13 ENSDORG00000009659 #16 ENSDORG00000026402 #16 Jpt2 (ENSDORG00000025742) #17 Cramp1 (ENSDORG00000013715) #18 Ift140 (ENSDORG00000004166) #20 Tmem204 (ENSDORG00000028876) #19 Telo2 (ENSDORG00000004164) #21 Ptx4 (ENSDORG00000000363) #22 Clcn7 (ENSDORG00000009312) #23 Ccdc154 (ENSDORG00000009310) #24 Unkl (ENSDORG00000015663) #26 Gnptg (ENSDORG00000015662) #27 ENSDORG00000008458 #28 Baiap3 (ENSDORG00000008452) #29 Ube2i (ENSDORG00000023979) #30 Prss29 (ENSDORG00000029349) ENSDORG00000014822 Cacna1h (ENSDORG00000014816) #34 Tekt4 (ENSDORG00000024604) Sox8 (ENSDORG00000025495) #36 Gng13 (ENSDORG00000024959) ENSDORG00000029298 Rpusd1 (ENSDORG00000026656) Myomorpha ANCESTRAL SPECIES 17 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000163349 #33 Muroidea ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.j ENSGT00940000163349 #33 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.j ENSGT00940000163349 #33 Cricetidae ANCESTRAL SPECIES ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.j ENSGT00940000163349 #33 ENSGT00940000156666 #34 Cricetinae ANCESTRAL SPECIES ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.j ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00950000182894.B Golden Hamster MODERN SPECIES 733 Fahd1 (ENSMAUG00000008227) #8 Hagh (ENSMAUG00000012144) #9 Igfals (ENSMAUG00000021813) #10 Nubp2 (ENSMAUG00000006099) #11 Spsb3 (ENSMAUG00000011949) #12 Eme2 (ENSMAUG00000008967) #13 Mrps34 (ENSMAUG00000015906) #14 Nme3 (ENSMAUG00000008485) #15 Mapk8ip3 (ENSMAUG00000010859) #16 ENSMAUG00000007417 Jpt2 (ENSMAUG00000005592) #17 Cramp1 (ENSMAUG00000019364) #18 ENSMAUG00000022190 #20 Tmem204 (ENSMAUG00000008010) #19 ENSMAUG00000022008 #20 Ptx4 (ENSMAUG00000017221) #22 Clcn7 (ENSMAUG00000021954) #23 Ccdc154 (ENSMAUG00000021304) #24 Uqcc4 (ENSMAUG00000002041) #25 Unkl (ENSMAUG00000016281) #26 Gnptg (ENSMAUG00000011816) #27 Tsr3 (ENSMAUG00000019859) #28 Baiap3 (ENSMAUG00000009623) #29 Ube2i (ENSMAUG00000019217) #30 Prss34 (ENSMAUG00000007393) #31 Prss29 (ENSMAUG00000012631) Tpsg1 (ENSMAUG00000013328) #33 ENSMAUG00000017437 #34 Tekt4 (ENSMAUG00000008990) Sstr5 (ENSMAUG00000007403) Sox8 (ENSMAUG00000013294) #36 Chinese hamster chok1gshd MODERN SPECIES 229 Meiob (ENSCGRG00001024640) #7 Fahd1 (ENSCGRG00001013933) #8 Hagh (ENSCGRG00001014522) #9 Igfals (ENSCGRG00001023230) #10 Nubp2 (ENSCGRG00001024233) #11 Spsb3 (ENSCGRG00001017880) #12 Eme2 (ENSCGRG00001014405) #13 Mrps34 (ENSCGRG00001023318) #14 Nme3 (ENSCGRG00001024438) #15 Mapk8ip3 (ENSCGRG00001009625) #16 Jpt2 (ENSCGRG00001023398) #17 Cramp1 (ENSCGRG00001024738) #18 Ift140 (ENSCGRG00001020155) #20 Tmem204 (ENSCGRG00001023413) #19 Telo2 (ENSCGRG00001024725) #21 Ptx4 (ENSCGRG00001018707) #22 Clcn7 (ENSCGRG00001022791) #23 Ccdc154 (ENSCGRG00001021301) #24 ENSCGRG00001008639 Uqcc4 (ENSCGRG00001011218) #25 Unkl (ENSCGRG00001014153) #26 Gnptg (ENSCGRG00001018591) #27 Tsr3 (ENSCGRG00001021799) #28 Baiap3 (ENSCGRG00001011930) #29 ENSCGRG00001021777 #30 Prss34 (ENSCGRG00001017246) #31 Prss28 (ENSCGRG00001017156) Prss29 (ENSCGRG00001007493) Tpsb2 (ENSCGRG00001005899) Tpsg1 (ENSCGRG00001011942) #33 Cacna1h (ENSCGRG00001019517) #34 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207.j ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00950000182894.B Northern American deer mouse MODERN SPECIES 21 ENSPEMG00000025128 #7 ENSPEMG00000013732 #8 Hagh (ENSPEMG00000010566) #9 Igfals (ENSPEMG00000008578) #10 Nubp2 (ENSPEMG00000010441) #11 Spsb3 (ENSPEMG00000016895) #12 Eme2 (ENSPEMG00000001093) #13 Mrps34 (ENSPEMG00000005957) #14 Nme3 (ENSPEMG00000018639) #15 Mapk8ip3 (ENSPEMG00000011936) #16 Jpt2 (ENSPEMG00000017546) #17 Cramp1 (ENSPEMG00000007023) #18 Tmem204 (ENSPEMG00000027984) #19 Ift140 (ENSPEMG00000014706) #20 Telo2 (ENSPEMG00000017007) #21 Ptx4 (ENSPEMG00000012407) #22 Clcn7 (ENSPEMG00000016398) #23 Ccdc154 (ENSPEMG00000006684) #24 Percc1 (ENSPEMG00000028044) Uqcc4 (ENSPEMG00000025335) #25 Unkl (ENSPEMG00000008937) #26 ENSPEMG00000028821 ENSPEMG00000031212 Tsr3 (ENSPEMG00000005763) #28 Baiap3 (ENSPEMG00000017470) #29 Ube2i (ENSPEMG00000009076) #30 Prss34 (ENSPEMG00000015146) #31 Prss29 (ENSPEMG00000014382) ENSPEMG00000030592 Tpsg1 (ENSPEMG00000007929) #33 Cacna1h (ENSPEMG00000012136) #34 Prairie vole MODERN SPECIES 15 Fahd1 (ENSMOCG00000001032) #8 Hagh (ENSMOCG00000020674) #9 Igfals (ENSMOCG00000013702) #10 Nubp2 (ENSMOCG00000003091) #11 Spsb3 (ENSMOCG00000000734) #12 Eme2 (ENSMOCG00000019621) #13 Mrps34 (ENSMOCG00000004274) #14 ENSMOCG00000003271 #15 Mapk8ip3 (ENSMOCG00000018334) #16 Jpt2 (ENSMOCG00000022903) #17 Cramp1 (ENSMOCG00000015569) #18 ENSMOCG00000011625 #20 Tmem204 (ENSMOCG00000010004) #19 ENSMOCG00000014894 #20 Telo2 (ENSMOCG00000022271) #21 Ptx4 (ENSMOCG00000016016) #22 Clcn7 (ENSMOCG00000012551) #23 Ccdc154 (ENSMOCG00000008134) #24 Uqcc4 (ENSMOCG00000014311) #25 Unkl (ENSMOCG00000011424) #26 Gnptg (ENSMOCG00000003323) #27 Tsr3 (ENSMOCG00000020216) #28 Baiap3 (ENSMOCG00000013309) #29 ENSMOCG00000003971 #30 Prss34 (ENSMOCG00000014541) #31 Prss29 (ENSMOCG00000013632) Tpsg1 (ENSMOCG00000005651) #33 Cacna1h (ENSMOCG00000018501) #34 Tekt4 (ENSMOCG00000021268) Sstr5 (ENSMOCG00000009060) Sox8 (ENSMOCG00000016165) #36 Murinae ANCESTRAL SPECIES 7 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.k #26 ENSGT00910000147428 ENSGT00940000158822.l #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.x #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.i Mus ANCESTRAL SPECIES 21 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.k #26 ENSGT00910000147428 ENSGT00940000158822.l #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.x #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.i Mus_A ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652.r #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.k #26 ENSGT00910000147428 ENSGT00940000158822.l #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.x.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.i Mus_B ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652.r #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.k #26 ENSGT00910000147428 ENSGT00940000158822.l #26 ENSGT00510000048359 #27 ENSGT00390000014665.b #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.x.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.i Mouse MODERN SPECIES 8 Meiob (ENSMUSG00000024155) #7 Hagh (ENSMUSG00000024158) #9 Fahd1 (ENSMUSG00000045316) #8 Igfals (ENSMUSG00000046070) #10 Nubp2 (ENSMUSG00000039183) #11 Spsb3 (ENSMUSG00000024160) #12 Eme2 (ENSMUSG00000073436) #13 Mapk8ip3 (ENSMUSG00000024163) #16 Mrps34 (ENSMUSG00000038880) #14 Nme3 (ENSMUSG00000073435) #15 Jpt2 (ENSMUSG00000024165) #17 Cramp1 (ENSMUSG00000038002) #18 Ift140 (ENSMUSG00000024169) #20 Tmem204 (ENSMUSG00000024168) #19 Telo2 (ENSMUSG00000024170) #21 Ptx4 (ENSMUSG00000044172) #22 Clcn7 (ENSMUSG00000036636) #23 Ccdc154 (ENSMUSG00000059562) #24 Percc1 (ENSMUSG00000114245) Uqcc4 (ENSMUSG00000067722) #25 Unkl (ENSMUSG00000015127) #26 Gnptg (ENSMUSG00000035521) #27 Tsr3 (ENSMUSG00000015126) #28 Baiap3 (ENSMUSG00000047507) #29 Ube2i (ENSMUSG00000015120) #30 Prss34 (ENSMUSG00000056399) #31 Prss28 (ENSMUSG00000024171) Prss29 (ENSMUSG00000034039) Tpsab1 (ENSMUSG00000024173) Tpsb2 (ENSMUSG00000033825) Tpsg1 (ENSMUSG00000033200) #33 Mus_C ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652.q.b #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822.k #26 ENSGT00910000147428 ENSGT00940000158822.l #26 ENSGT00510000048359 #27 ENSGT00390000014665.b #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.x.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000163159.b.b ENSGT00940000162207.i ENSGT00940000162207.j spretus MODERN SPECIES 8 MGP_SPRETEiJ_G0022117 Ndufb10 (MGP_SPRETEiJ_G0022118) MGP_SPRETEiJ_G0022119 Igfals (MGP_SPRETEiJ_G0022120) #10 Nubp2 (MGP_SPRETEiJ_G0022121) #11 Spsb3 (MGP_SPRETEiJ_G0022122) #12 MGP_SPRETEiJ_G0022123 Mapk8ip3 (MGP_SPRETEiJ_G0022124) #16 Mrps34 (MGP_SPRETEiJ_G0022125) #14 Nme3 (MGP_SPRETEiJ_G0022126) #15 Jpt2 (MGP_SPRETEiJ_G0022127) #17 Cramp1 (MGP_SPRETEiJ_G0022128) #18 Ift140 (MGP_SPRETEiJ_G0022129) #20 Tmem204 (MGP_SPRETEiJ_G0022130) #19 Telo2 (MGP_SPRETEiJ_G0022131) #21 Ptx4 (MGP_SPRETEiJ_G0022132) #22 Clcn7 (MGP_SPRETEiJ_G0022133) #23 Ccdc154 (MGP_SPRETEiJ_G0022134) #24 Uqcc4 (MGP_SPRETEiJ_G0022135) #25 Unkl (MGP_SPRETEiJ_G0022136) #26 MGP_SPRETEiJ_G0022137 #26 Gnptg (MGP_SPRETEiJ_G0022138) #27 Tsr3 (MGP_SPRETEiJ_G0022139) #28 Baiap3 (MGP_SPRETEiJ_G0022140) #29 Ube2i (MGP_SPRETEiJ_G0022141) #30 Prss34 (MGP_SPRETEiJ_G0022142) #31 Prss28 (MGP_SPRETEiJ_G0022143) Prss29 (MGP_SPRETEiJ_G0022144) Tpsab1 (MGP_SPRETEiJ_G0022145) Tpsb2 (MGP_SPRETEiJ_G0022146) Tpsg1 (MGP_SPRETEiJ_G0022147) #33 Steppe mouse MODERN SPECIES 3126 Meiob (ENSMSIG00000008345) #7 Fahd1 (ENSMSIG00000008407) #8 Hagh (ENSMSIG00000008421) #9 Igfals (ENSMSIG00000008467) #10 Nubp2 (ENSMSIG00000008482) #11 ENSMSIG00000008500 #12 Eme2 (ENSMSIG00000008685) #13 Mrps34 (ENSMSIG00000008733) #14 Nme3 (ENSMSIG00000008746) #15 Mapk8ip3 (ENSMSIG00000008777) #16 ENSMSIG00000010638 #17 Cramp1 (ENSMSIG00000010664) #18 Ift140 (ENSMSIG00000010724) #20 Tmem204 (ENSMSIG00000010873) #19 Telo2 (ENSMSIG00000010889) #21 Ptx4 (ENSMSIG00000010971) #22 Clcn7 (ENSMSIG00000011010) #23 Ccdc154 (ENSMSIG00000011172) #24 ENSMSIG00000011275 #25 Unkl (ENSMSIG00000011290) #26 ENSMSIG00000011382 Gnptg (ENSMSIG00000011397) #27 ENSMSIG00000011425 #28 Baiap3 (ENSMSIG00000011451) #29 Ube2i (ENSMSIG00000012009) #30 Prss34 (ENSMSIG00000012219) #31 Prss28 (ENSMSIG00000012265) Prss29 (ENSMSIG00000012288) Tpsab1 (ENSMSIG00000012313) Tpsb2 (ENSMSIG00000012330) Tpsg1 (ENSMSIG00000012348) #33 Ryukyu mouse MODERN SPECIES 8 Meiob (MGP_CAROLIEiJ_G0021206) #7 Hagh (MGP_CAROLIEiJ_G0021207) #9 Fahd1 (MGP_CAROLIEiJ_G0021208) #8 Igfals (MGP_CAROLIEiJ_G0021209) #10 Nubp2 (MGP_CAROLIEiJ_G0021210) #11 MGP_CAROLIEiJ_G0021211 #12 Eme2 (MGP_CAROLIEiJ_G0021212) #13 Mapk8ip3 (MGP_CAROLIEiJ_G0021213) #16 Mrps34 (MGP_CAROLIEiJ_G0021214) #14 Nme3 (MGP_CAROLIEiJ_G0021215) #15 MGP_CAROLIEiJ_G0021216 #17 Cramp1 (MGP_CAROLIEiJ_G0021217) #18 Ift140 (MGP_CAROLIEiJ_G0021218) #20 Tmem204 (MGP_CAROLIEiJ_G0021219) #19 Telo2 (MGP_CAROLIEiJ_G0021220) #21 Ptx4 (MGP_CAROLIEiJ_G0021221) #22 Clcn7 (MGP_CAROLIEiJ_G0021222) #23 Ccdc154 (MGP_CAROLIEiJ_G0021223) #24 Uqcc4 (MGP_CAROLIEiJ_G0021224) #25 Unkl (MGP_CAROLIEiJ_G0021225) #26 MGP_CAROLIEiJ_G0021226 #26 Gnptg (MGP_CAROLIEiJ_G0021227) #27 Tsr3 (MGP_CAROLIEiJ_G0021228) #28 Baiap3 (MGP_CAROLIEiJ_G0021229) #29 Ube2i (MGP_CAROLIEiJ_G0021230) #30 Prss34 (MGP_CAROLIEiJ_G0021231) #31 Prss28 (MGP_CAROLIEiJ_G0021232) Prss29 (MGP_CAROLIEiJ_G0021233) Tpsab1 (MGP_CAROLIEiJ_G0021234) Tpsb2 (MGP_CAROLIEiJ_G0021235) Tpsg1 (MGP_CAROLIEiJ_G0021236) #33 Shrew mouse MODERN SPECIES 13 Hagh (MGP_PahariEiJ_G0023524) #9 Fahd1 (MGP_PahariEiJ_G0023525) #8 Igfals (MGP_PahariEiJ_G0023526) #10 Nubp2 (MGP_PahariEiJ_G0023527) #11 MGP_PahariEiJ_G0023528 #12 Eme2 (MGP_PahariEiJ_G0023529) #13 Mapk8ip3 (MGP_PahariEiJ_G0023530) #16 Mrps34 (MGP_PahariEiJ_G0023531) #14 Nme3 (MGP_PahariEiJ_G0023532) #15 MGP_PahariEiJ_G0023533 #17 MGP_PahariEiJ_G0023534 #17 Cramp1 (MGP_PahariEiJ_G0023535) #18 Ift140 (MGP_PahariEiJ_G0023536) #20 Tmem204 (MGP_PahariEiJ_G0023537) #19 Telo2 (MGP_PahariEiJ_G0023538) #21 Ptx4 (MGP_PahariEiJ_G0023539) #22 Clcn7 (MGP_PahariEiJ_G0023540) #23 Ccdc154 (MGP_PahariEiJ_G0023541) #24 Uqcc4 (MGP_PahariEiJ_G0023542) #25 Unkl (MGP_PahariEiJ_G0023543) #26 MGP_PahariEiJ_G0023544 #26 Gnptg (MGP_PahariEiJ_G0023545) #27 Tsr3 (MGP_PahariEiJ_G0023546) #28 Baiap3 (MGP_PahariEiJ_G0023547) #29 Ube2i (MGP_PahariEiJ_G0023548) #30 Prss34 (MGP_PahariEiJ_G0023549) #31 Prss28 (MGP_PahariEiJ_G0023550) Prss29 (MGP_PahariEiJ_G0023551) Tpsab1 (MGP_PahariEiJ_G0023552) MGP_PahariEiJ_G0023553 Tpsg1 (MGP_PahariEiJ_G0023554) #33 Rat MODERN SPECIES 1 Meiob (ENSRNOG00000014711) #7 Fahd1 (ENSRNOG00000014727) #8 Hagh (ENSRNOG00000014743) #9 Igfals (ENSRNOG00000015061) #10 Nubp2 (ENSRNOG00000015090) #11 Spsb3 (ENSRNOG00000015300) #12 Eme2 (ENSRNOG00000024867) #13 Mrps34 (ENSRNOG00000015479) #14 Nme3 (ENSRNOG00000015749) #15 Mapk8ip3 (ENSRNOG00000033568) #16 Jpt2 (ENSRNOG00000024661) #17 Cramp1 (ENSRNOG00000024635) #18 Ift140 (ENSRNOG00000016545) #20 Tmem204 (ENSRNOG00000016494) #19 Telo2 (ENSRNOG00000016774) #21 Ptx4 (ENSRNOG00000060934) #22 Clcn7 (ENSRNOG00000016976) #23 Ccdc154 (ENSRNOG00000030541) #24 Percc1 (ENSRNOG00000065484) Snrpc-ps3 (ENSRNOG00000017586) Uqcc4 (ENSRNOG00000029415) #25 Unkl (ENSRNOG00000054605) #26 Gnptg (ENSRNOG00000024455) #27 Tsr3 (ENSRNOG00000017858) #28 Baiap3 (ENSRNOG00000017893) #29 Ube2i (ENSRNOG00000066579) #30 Prss34 (ENSRNOG00000018466) #31 Prss28l-ps1 (ENSRNOG00000058976) Prss29 (ENSRNOG00000039405) RGD1559662 (ENSRNOG00000028926) Tpsab1 (ENSRNOG00000024181) Lesser Egyptian jerboa MODERN SPECIES 47 Meiob (ENSJJAG00000020956) #7 Fahd1 (ENSJJAG00000012552) #8 ENSJJAG00000018924 #9 Igfals (ENSJJAG00000014391) #10 Nubp2 (ENSJJAG00000010092) #11 Spsb3 (ENSJJAG00000005206) #12 Eme2 (ENSJJAG00000022042) #13 Mrps34 (ENSJJAG00000016768) #14 Nme3 (ENSJJAG00000014938) #15 Mapk8ip3 (ENSJJAG00000012043) #16 ENSJJAG00000022922 #17 Cramp1 (ENSJJAG00000019556) #18 Tmem204 (ENSJJAG00000016676) #19 Ift140 (ENSJJAG00000015483) #20 Telo2 (ENSJJAG00000019914) #21 Ptx4 (ENSJJAG00000023455) #22 Clcn7 (ENSJJAG00000022469) #23 Ccdc154 (ENSJJAG00000000910) #24 Uqcc4 (ENSJJAG00000004240) #25 Unkl (ENSJJAG00000011047) #26 Gnptg (ENSJJAG00000015582) #27 Tsr3 (ENSJJAG00000017912) #28 Baiap3 (ENSJJAG00000014083) #29 ENSJJAG00000019500 #30 Prss28 (ENSJJAG00000008115) Prss29 (ENSJJAG00000006993) ENSJJAG00000023979 ENSJJAG00000015444 #33 Cacna1h (ENSJJAG00000010593) #34 Tekt4 (ENSJJAG00000009657) Sstr5 (ENSJJAG00000012224) Rodentia_A ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000003597 #7 FAHD1 (ENSHGLG00000041252) #8 HAGH (ENSHGLG00000003923) #9 IGFALS (ENSHGLG00000004496) #10 NUBP2 (ENSHGLG00000004842) #11 SPSB3 (ENSHGLG00000001146) #12 EME2 (ENSHGLG00000038718) #13 MRPS34 (ENSHGLG00000001213) #14 NME3 (ENSHGLG00000001237) #15 MAPK8IP3 (ENSHGLG00000001589) #16 JPT2 (ENSHGLG00000046712) #17 CRAMP1 (ENSHGLG00000001969) #18 TMEM204 (ENSHGLG00000032434) #19 IFT140 (ENSHGLG00000002078) #20 ENSHGLG00000047108 #21 ENSHGLG00000002228 #22 ENSHGLG00000037724 ENSHGLG00000047283 ENSHGLG00000009422 ENSHGLG00000013734 ENSHGLG00000010841 MRPL40 (ENSHGLG00000039126) C22orf39 (ENSHGLG00000035091) ENSHGLG00000014850 CDC45 (ENSHGLG00000015159) CLDN5 (ENSHGLG00000046656) ENSHGLG00000015729 SEPTIN5 (ENSHGLG00000013741) GP1BB (ENSHGLG00000016759) TBX1 (ENSHGLG00000016334) GNB1L (ENSHGLG00000016380) Hystricomorpha_a ANCESTRAL SPECIES 2 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b.e ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000160265 ENSGT00940000159920 #36 Hystricomorpha_b ANCESTRAL SPECIES 1 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b.e ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000160265 ENSGT00940000159920 #36 Long-tailed chinchilla MODERN SPECIES 149 HS3ST6 (ENSCLAG00000011879) ENSCLAG00000012822 #7 HAGH (ENSCLAG00000013689) #9 IGFALS (ENSCLAG00000014739) #10 NUBP2 (ENSCLAG00000015595) #11 SPSB3 (ENSCLAG00000013801) #12 EME2 (ENSCLAG00000015876) #13 MRPS34 (ENSCLAG00000015224) #14 NME3 (ENSCLAG00000015018) #15 MAPK8IP3 (ENSCLAG00000014643) #16 JPT2 (ENSCLAG00000014793) #17 CRAMP1 (ENSCLAG00000013881) #18 IFT140 (ENSCLAG00000013535) #20 TMEM204 (ENSCLAG00000015782) #19 TELO2 (ENSCLAG00000012862) #21 PTX4 (ENSCLAG00000015124) #22 CLCN7 (ENSCLAG00000014385) #23 CCDC154 (ENSCLAG00000013674) #24 UQCC4 (ENSCLAG00000016079) #25 UNKL (ENSCLAG00000015420) #26 GNPTG (ENSCLAG00000012982) #27 TSR3 (ENSCLAG00000013022) #28 BAIAP3 (ENSCLAG00000014438) #29 UBE2I (ENSCLAG00000015675) #30 ENSCLAG00000015166 #31 ENSCLAG00000013087 #31 ENSCLAG00000013616 ENSCLAG00000014024 CACNA1H (ENSCLAG00000013993) #34 TEKT4 (ENSCLAG00000015231) SSTR5 (ENSCLAG00000016379) Degu MODERN SPECIES 62 ENSODEG00000013846 #7 FAHD1 (ENSODEG00000020210) #8 HAGH (ENSODEG00000014503) #9 IGFALS (ENSODEG00000014585) #10 NUBP2 (ENSODEG00000014655) #11 SPSB3 (ENSODEG00000014798) #12 EME2 (ENSODEG00000015003) #13 MRPS34 (ENSODEG00000015453) #14 NME3 (ENSODEG00000015019) #15 MAPK8IP3 (ENSODEG00000016004) #16 JPT2 (ENSODEG00000016076) #17 CRAMP1 (ENSODEG00000014456) #18 IFT140 (ENSODEG00000015652) #20 TMEM204 (ENSODEG00000015065) #19 TELO2 (ENSODEG00000014830) #21 PTX4 (ENSODEG00000014551) #22 CLCN7 (ENSODEG00000014485) #23 CCDC154 (ENSODEG00000015378) #24 ENSODEG00000020180 UQCC4 (ENSODEG00000014612) #25 UNKL (ENSODEG00000017747) #26 GNPTG (ENSODEG00000015470) #27 TSR3 (ENSODEG00000014546) #28 BAIAP3 (ENSODEG00000015393) #29 ENSODEG00000016190 #30 ENSODEG00000015581 #31 ENSODEG00000015365 ENSODEG00000014697 ENSODEG00000014982 CACNA1H (ENSODEG00000015460) #34 TEKT4 (ENSODEG00000015302) Guinea pig MODERN SPECIES 4 HS3ST6 (ENSCPOG00000014346) ENSCPOG00000001543 #7 HAGH (ENSCPOG00000024438) #9 IGFALS (ENSCPOG00000033322) #10 NUBP2 (ENSCPOG00000008071) #11 SPSB3 (ENSCPOG00000026170) #12 EME2 (ENSCPOG00000032066) #13 MRPS34 (ENSCPOG00000005379) #14 NME3 (ENSCPOG00000035161) #15 MAPK8IP3 (ENSCPOG00000005354) #16 JPT2 (ENSCPOG00000032923) #17 CRAMP1 (ENSCPOG00000005336) #18 TMEM204 (ENSCPOG00000030328) #19 IFT140 (ENSCPOG00000003314) #20 TELO2 (ENSCPOG00000003304) #21 PTX4 (ENSCPOG00000007357) #22 CLCN7 (ENSCPOG00000012975) #23 CCDC154 (ENSCPOG00000012968) #24 UQCC4 (ENSCPOG00000031653) #25 UNKL (ENSCPOG00000011846) #26 GNPTG (ENSCPOG00000014046) #27 TSR3 (ENSCPOG00000010452) #28 BAIAP3 (ENSCPOG00000010436) #29 UBE2I (ENSCPOG00000035983) #30 ENSCPOG00000014280 #31 ENSCPOG00000033354 ENSCPOG00000030620 ENSCPOG00000037807 ENSCPOG00000038978 ENSCPOG00000040644 ENSCPOG00000033452 Sciuridae ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00910000147428 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B Marmotini ANCESTRAL SPECIES 3 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.m.b #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000163090 #35 Alpin marmot MODERN SPECIES 28 HS3ST6 (ENSMMMG00000011071) ENSMMMG00000011082 #7 FAHD1 (ENSMMMG00000011106) #8 HAGH (ENSMMMG00000011110) #9 IGFALS (ENSMMMG00000011124) #10 NUBP2 (ENSMMMG00000011128) #11 SPSB3 (ENSMMMG00000011143) #12 EME2 (ENSMMMG00000011151) #13 MRPS34 (ENSMMMG00000011168) #14 MAPK8IP3 (ENSMMMG00000011208) #16 JPT2 (ENSMMMG00000015507) #17 CRAMP1 (ENSMMMG00000015511) #18 IFT140 (ENSMMMG00000015580) #20 TMEM204 (ENSMMMG00000015619) #19 TELO2 (ENSMMMG00000015629) #21 PTX4 (ENSMMMG00000015680) #22 CLCN7 (ENSMMMG00000015689) #23 CCDC154 (ENSMMMG00000015727) #24 PERCC1 (ENSMMMG00000015837) UQCC4 (ENSMMMG00000015846) #25 UNKL (ENSMMMG00000015853) #26 TSR3 (ENSMMMG00000015912) #28 ENSMMMG00000015922 #29 ENSMMMG00000015930 ENSMMMG00000015935 #30 ENSMMMG00000015984 #31 ENSMMMG00000016343 ENSMMMG00000016356 ENSMMMG00000016915 ENSMMMG00000017657 ENSMMMG00000017663 #34 Marmotini_b ANCESTRAL SPECIES 1 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.m.b #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.b ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000163090 #35 Squirrel MODERN SPECIES 294 ENSSTOG00000020433 #7 HAGH (ENSSTOG00000009109) #9 IGFALS (ENSSTOG00000027057) #10 NUBP2 (ENSSTOG00000026670) #11 SPSB3 (ENSSTOG00000021171) #12 EME2 (ENSSTOG00000000961) #13 MRPS34 (ENSSTOG00000021586) #14 NME3 (ENSSTOG00000028986) #15 MAPK8IP3 (ENSSTOG00000003734) #16 JPT2 (ENSSTOG00000003729) #17 ENSSTOG00000025346 CRAMP1 (ENSSTOG00000003675) #18 IFT140 (ENSSTOG00000003636) #20 TMEM204 (ENSSTOG00000021652) #19 TELO2 (ENSSTOG00000003610) #21 PTX4 (ENSSTOG00000003603) #22 CLCN7 (ENSSTOG00000023676) #23 CCDC154 (ENSSTOG00000003540) #24 UQCC4 (ENSSTOG00000003515) #25 UNKL (ENSSTOG00000003487) #26 GNPTG (ENSSTOG00000019834) #27 TSR3 (ENSSTOG00000015781) #28 BAIAP3 (ENSSTOG00000015767) #29 Ube2i (ENSSTOG00000010233) #30 ENSSTOG00000024974 #31 ENSSTOG00000000724 ENSSTOG00000003188 ENSSTOG00000033557 ENSSTOG00000028353 #34 ENSSTOG00000022453 #34 Eurasian red squirrel MODERN SPECIES 9 HS3ST6 (ENSSVLG00005019256) ENSSVLG00005019191 #7 ENSSVLG00005019134 #8 HAGH (ENSSVLG00005018908) #9 IGFALS (ENSSVLG00005018848) #10 NUBP2 (ENSSVLG00005018731) #11 EME2 (ENSSVLG00005018557) #13 MRPS34 (ENSSVLG00005018518) #14 NME3 (ENSSVLG00005018434) #15 MAPK8IP3 (ENSSVLG00005018319) #16 JPT2 (ENSSVLG00005018232) #17 CRAMP1 (ENSSVLG00005018001) #18 TMEM204 (ENSSVLG00005017964) #19 IFT140 (ENSSVLG00005017909) #20 TELO2 (ENSSVLG00005017874) #21 PTX4 (ENSSVLG00005017820) #22 CLCN7 (ENSSVLG00005017491) #23 CCDC154 (ENSSVLG00005017302) #24 PERCC1 (ENSSVLG00005017276) UQCC4 (ENSSVLG00005017225) #25 UNKL (ENSSVLG00005017152) #26 ENSSVLG00005024973 GNPTG (ENSSVLG00005024947) #27 TSR3 (ENSSVLG00005024904) #28 UBE2I (ENSSVLG00005024408) #30 ENSSVLG00005024075 ENSSVLG00005023883 CACNA1H (ENSSVLG00005023660) #34 TEKT4 (ENSSVLG00005023591) C1QTNF8 (ENSSVLG00005023545) #35 SSTR5 (ENSSVLG00005023526) Laurasiatheria ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Laurasiatheria_a ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Artiodactyla ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Suina ANCESTRAL SPECIES 28 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A.db #20 ENSGT00390000015528 #19 ENSGT00940000153417.A.eb #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 Pig MODERN SPECIES 11 ENSSSCG00000025711 #7 ENSSSCG00000008012 #9 FAHD1 (ENSSSCG00000039715) #8 IGFALS (ENSSSCG00000008013) #10 NUBP2 (ENSSSCG00000008014) #11 SPSB3 (ENSSSCG00000039024) #12 EME2 (ENSSSCG00000021467) #13 MRPS34 (ENSSSCG00000008016) #14 NME3 (ENSSSCG00000008017) #15 MAPK8IP3 (ENSSSCG00000008018) #16 JPT2 (ENSSSCG00000008019) #17 CRAMP1 (ENSSSCG00000008026) #18 IFT140 (ENSSSCG00000008020) #20 TMEM204 (ENSSSCG00000008021) #19 TELO2 (ENSSSCG00000008022) #21 PTX4 (ENSSSCG00000037262) #22 CLCN7 (ENSSSCG00000008024) #23 CCDC154 (ENSSSCG00000028139) #24 PERCC1 (ENSSSCG00000048138) UQCC4 (ENSSSCG00000038882) #25 UNKL (ENSSSCG00000022963) #26 GNPTG (ENSSSCG00000008031) #27 ENSSSCG00000063096 TSR3 (ENSSSCG00000008030) #28 BAIAP3 (ENSSSCG00000008029) #29 ENSSSCG00000021560 #30 ENSSSCG00000008032 #31 ENSSSCG00000035337 ENSSSCG00000021222 CACNA1H (ENSSSCG00000034266) #34 TEKT4 (ENSSSCG00000032076) Artiodactyla_a ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Artiodactyla_b ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Pecora ANCESTRAL SPECIES 10 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Percora_a ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Bovidae ANCESTRAL SPECIES 11 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Bovinae ANCESTRAL SPECIES 7 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00960000190820 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 Bos ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00960000190820 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.ob.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207.y ENSGT00940000162207.z ENSGT00940000156666 #34 Bos_a ANCESTRAL SPECIES 13 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00960000190820 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.ob.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207.y ENSGT00940000162207.z ENSGT00940000156666 #34 Domestic yak MODERN SPECIES 18 ENSBGRG00000026058 #7 FAHD1 (ENSBGRG00000026099) #8 HAGH (ENSBGRG00000026102) #9 IGFALS (ENSBGRG00000026120) #10 NUBP2 (ENSBGRG00000026125) #11 SPSB3 (ENSBGRG00000026135) #12 EME2 (ENSBGRG00000026143) #13 MRPS34 (ENSBGRG00000026152) #14 NME3 (ENSBGRG00000026159) #15 ENSBGRG00000026167 #16 JPT2 (ENSBGRG00000026177) #17 CRAMP1 (ENSBGRG00000026195) #18 ENSBGRG00000026261 #20 TMEM204 (ENSBGRG00000026263) #19 TELO2 (ENSBGRG00000026295) #21 PTX4 (ENSBGRG00000026360) #22 CLCN7 (ENSBGRG00000026391) #23 CCDC154 (ENSBGRG00000026436) #24 PERCC1 (ENSBGRG00000026443) UQCC4 (ENSBGRG00000026446) #25 UNKL (ENSBGRG00000026455) #26 ENSBGRG00000026477 ENSBGRG00000026483 #27 TSR3 (ENSBGRG00000026507) #28 BAIAP3 (ENSBGRG00000026523) #29 ENSBGRG00000026529 #30 ENSBGRG00000026541 #31 ENSBGRG00000026570 ENSBGRG00000026579 #31 ENSBGRG00000026590 CACNA1H (ENSBGRG00000026596) #34 Bos_b ANCESTRAL SPECIES 6 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00960000190820 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.ob.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207.y ENSGT00940000162207.z ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Cow MODERN SPECIES 17 FAHD1 (ENSBTAG00000033015) #8 HAGH (ENSBTAG00000019998) #9 IGFALS (ENSBTAG00000033299) #10 NUBP2 (ENSBTAG00000016561) #11 SPSB3 (ENSBTAG00000016558) #12 EME2 (ENSBTAG00000016553) #13 MRPS34 (ENSBTAG00000026415) #14 NME3 (ENSBTAG00000016552) #15 ENSBTAG00000052060 MAPK8IP3 (ENSBTAG00000002211) #16 JPT2 (ENSBTAG00000002209) #17 CRAMP1 (ENSBTAG00000002202) #18 TMEM204 (ENSBTAG00000007246) #19 IFT140 (ENSBTAG00000007245) #20 TELO2 (ENSBTAG00000019086) #21 PTX4 (ENSBTAG00000005148) #22 CLCN7 (ENSBTAG00000015889) #23 CCDC154 (ENSBTAG00000000568) #24 UQCC4 (ENSBTAG00000033395) #25 UNKL (ENSBTAG00000014126) #26 ENSBTAG00000051573 TSR3 (ENSBTAG00000014101) #28 BAIAP3 (ENSBTAG00000014100) #29 UBE2I (ENSBTAG00000038866) ENSBTAG00000046965 #31 ENSBTAG00000046722 #31 TPSB2 (ENSBTAG00000007325) ENSBTAG00000016520 CACNA1H (ENSBTAG00000026461) #34 ENSBTAG00000053940 ENSBTAG00000049617 Hybrid Bos Indicus MODERN SPECIES 17 FAHD1 (ENSBIXG00005029225) #8 HAGH (ENSBIXG00005029215) #9 IGFALS (ENSBIXG00005001646) #10 EME2 (ENSBIXG00005029199) #13 SPSB3 (ENSBIXG00005001778) #12 ENSBIXG00005001802 #14 NME3 (ENSBIXG00005005200) #15 MAPK8IP3 (ENSBIXG00005029132) #16 ENSBIXG00005029057 JPT2 (ENSBIXG00005005130) #17 ENSBIXG00005029033 CRAMP1 (ENSBIXG00005029023) #18 IFT140 (ENSBIXG00005002075) #20 TMEM204 (ENSBIXG00005002103) #19 TELO2 (ENSBIXG00005005091) #21 PTX4 (ENSBIXG00005002161) #22 CLCN7 (ENSBIXG00005028927) #23 CCDC154 (ENSBIXG00005004984) #24 UQCC4 (ENSBIXG00005028709) #25 UNKL (ENSBIXG00005028682) #26 TSR3 (ENSBIXG00005002420) #28 BAIAP3 (ENSBIXG00005006545) #29 ENSBIXG00005002428 #30 ENSBIXG00005002470 #31 ENSBIXG00005028187 #31 ENSBIXG00005028176 ENSBIXG00005028167 CACNA1H (ENSBIXG00005004842) #34 ENSBIXG00005028087 TEKT4 (ENSBIXG00005028080) C1QTNF8 (ENSBIXG00005028070) #35 American bison MODERN SPECIES 1609 PTX4 (ENSBBBG00000015630) #22 CLCN7 (ENSBBBG00000003900) #23 CCDC154 (ENSBBBG00000015603) #24 UNKL (ENSBBBG00000015583) #26 ENSBBBG00000008589 TSR3 (ENSBBBG00000015548) #28 BAIAP3 (ENSBBBG00000015516) #29 UBE2I (ENSBBBG00000003818) #30 Caprinae ANCESTRAL SPECIES 7 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B ENSGT00940000163090 #35 Goat MODERN SPECIES 17 HS3ST6 (ENSCHIG00000019888) ENSCHIG00000013357 #7 FAHD1 (ENSCHIG00000007917) #8 HAGH (ENSCHIG00000022722) #9 IGFALS (ENSCHIG00000005524) #10 NUBP2 (ENSCHIG00000024194) #11 SPSB3 (ENSCHIG00000024292) #12 MRPS34 (ENSCHIG00000026940) #14 NME3 (ENSCHIG00000020916) #15 MAPK8IP3 (ENSCHIG00000020649) #16 JPT2 (ENSCHIG00000009778) #17 CRAMP1 (ENSCHIG00000001484) #18 TMEM204 (ENSCHIG00000008739) #19 IFT140 (ENSCHIG00000017137) #20 TELO2 (ENSCHIG00000012866) #21 PTX4 (ENSCHIG00000010150) #22 CLCN7 (ENSCHIG00000016124) #23 CCDC154 (ENSCHIG00000013668) #24 UQCC4 (ENSCHIG00000017912) #25 UNKL (ENSCHIG00000025940) #26 GNPTG (ENSCHIG00000012080) #27 TSR3 (ENSCHIG00000016515) #28 BAIAP3 (ENSCHIG00000015762) #29 UBE2I (ENSCHIG00000017670) #30 ENSCHIG00000013659 ENSCHIG00000025068 CACNA1H (ENSCHIG00000018000) #34 ENSCHIG00000025112 TEKT4 (ENSCHIG00000023465) C1QTNF8 (ENSCHIG00000019568) #35 SSTR5 (ENSCHIG00000005253) Rambouillet Sheep MODERN SPECIES 16 ENSOARG00020026311 #7 FAHD1 (ENSOARG00020026309) #8 HAGH (ENSOARG00020026306) #9 IGFALS (ENSOARG00020026302) #10 NUBP2 (ENSOARG00020026299) #11 SPSB3 (ENSOARG00020026298) #12 EME2 (ENSOARG00020026295) #13 MRPS34 (ENSOARG00020026293) #14 NME3 (ENSOARG00020026291) #15 MAPK8IP3 (ENSOARG00020026283) #16 JPT2 (ENSOARG00020026280) #17 CRAMP1 (ENSOARG00020026270) #18 TMEM204 (ENSOARG00020026266) #19 IFT140 (ENSOARG00020026264) #20 TELO2 (ENSOARG00020026262) #21 PTX4 (ENSOARG00020026260) #22 CLCN7 (ENSOARG00020026257) #23 CCDC154 (ENSOARG00020026252) #24 PERCC1 (ENSOARG00020026249) UQCC4 (ENSOARG00020026247) #25 UNKL (ENSOARG00020026245) #26 ENSOARG00020026244 TSR3 (ENSOARG00020026242) #28 BAIAP3 (ENSOARG00020026237) #29 UBE2I (ENSOARG00020026231) #30 ENSOARG00020026229 #31 TPSB2 (ENSOARG00020026227) ENSOARG00020026225 CACNA1H (ENSOARG00020022237) #34 TEKT4 (ENSOARG00020021344) C1QTNF8 (ENSOARG00020021299) #35 Siberian musk deer MODERN SPECIES FAHD1 (ENSMMSG00000001429) #8 HAGH (ENSMMSG00000001440) #9 IGFALS (ENSMMSG00000001466) #10 NUBP2 (ENSMMSG00000001476) #11 SPSB3 (ENSMMSG00000001495) #12 EME2 (ENSMMSG00000001510) #13 ENSMMSG00000001526 #14 NME3 (ENSMMSG00000001535) #15 MAPK8IP3 (ENSMMSG00000001572) #16 ENSMMSG00000001612 JPT2 (ENSMMSG00000001637) #17 CRAMP1 (ENSMMSG00000001672) #18 IFT140 (ENSMMSG00000001736) #20 TMEM204 (ENSMMSG00000001793) #19 TELO2 (ENSMMSG00000001817) #21 PTX4 (ENSMMSG00000001845) #22 CLCN7 (ENSMMSG00000001887) #23 CCDC154 (ENSMMSG00000002000) #24 PERCC1 (ENSMMSG00000002030) ENSMMSG00000002044 #25 UNKL (ENSMMSG00000002072) #26 GNPTG (ENSMMSG00000002130) #27 TSR3 (ENSMMSG00000002150) #28 BAIAP3 (ENSMMSG00000002183) #29 ENSMMSG00000002225 #30 ENSMMSG00000002259 #31 ENSMMSG00000002486 #31 ENSMMSG00000002565 CACNA1H (ENSMMSG00000002593) #34 ENSMMSG00000002668 TEKT4 (ENSMMSG00000002686) Yarkand deer MODERN SPECIES 1 HAGH (ENSCHYG00000002161) #9 IGFALS (ENSCHYG00000002142) #10 NUBP2 (ENSCHYG00000002104) #11 ENSCHYG00000002081 #12 ENSCHYG00000002065 #13 MRPS34 (ENSCHYG00000002055) #14 NME3 (ENSCHYG00000002029) #15 ENSCHYG00000002013 #16 ENSCHYG00000002004 #16 ENSCHYG00000001980 #17 CRAMP1 (ENSCHYG00000001817) #18 ENSCHYG00000001757 #20 ENSCHYG00000001737 #19 ENSCHYG00000001722 #20 TELO2 (ENSCHYG00000001588) #21 PTX4 (ENSCHYG00000001547) #22 CLCN7 (ENSCHYG00000001248) #23 CCDC154 (ENSCHYG00000001172) #24 PERCC1 (ENSCHYG00000001151) UQCC4 (ENSCHYG00000001141) #25 UNKL (ENSCHYG00000001093) #26 GNPTG (ENSCHYG00000000992) #27 TSR3 (ENSCHYG00000000981) #28 BAIAP3 (ENSCHYG00000000754) #29 ENSCHYG00000000686 #30 ENSCHYG00000024353 #31 ENSCHYG00000023827 #31 ENSCHYG00000023719 ENSCHYG00000023502 CACNA1H (ENSCHYG00000023074) #34 TEKT4 (ENSCHYG00000022987) Cetacea ANCESTRAL SPECIES 3 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000164974 #32 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B Odontoceti ANCESTRAL SPECIES 3 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000164974 #32 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000164974 #32 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000163009 ENSGT00940000164974 #32 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000163009 ENSGT00940000164974 #32 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B Narwhal MODERN SPECIES 299 ENSMMNG00015003718 #7 FAHD1 (ENSMMNG00015003677) #8 HAGH (ENSMMNG00015003649) #9 IGFALS (ENSMMNG00015003621) #10 NUBP2 (ENSMMNG00015003598) #11 SPSB3 (ENSMMNG00015003567) #12 ENSMMNG00015003543 MRPS34 (ENSMMNG00015003531) #14 NME3 (ENSMMNG00015003514) #15 ENSMMNG00015003486 #16 JPT2 (ENSMMNG00015003456) #17 CRAMP1 (ENSMMNG00015003411) #18 TMEM204 (ENSMMNG00015003375) #19 IFT140 (ENSMMNG00015003282) #20 TELO2 (ENSMMNG00015003226) #21 PTX4 (ENSMMNG00015003188) #22 CLCN7 (ENSMMNG00015003119) #23 CCDC154 (ENSMMNG00015003052) #24 PERCC1 (ENSMMNG00015003027) UQCC4 (ENSMMNG00015003011) #25 UNKL (ENSMMNG00015002979) #26 GNPTG (ENSMMNG00015002928) #27 TSR3 (ENSMMNG00015002901) #28 BAIAP3 (ENSMMNG00015002823) #29 UBE2I (ENSMMNG00015002771) #30 ENSMMNG00015002740 ENSMMNG00015002721 #32 ENSMMNG00015002706 #32 CACNA1H (ENSMMNG00015002661) #34 ENSMMNG00015002626 TEKT4 (ENSMMNG00015002606) Beluga whale MODERN SPECIES 48 HS3ST6 (ENSDLEG00000007636) MEIOB (ENSDLEG00000007627) #7 FAHD1 (ENSDLEG00000007618) #8 HAGH (ENSDLEG00000007559) #9 IGFALS (ENSDLEG00000007530) #10 ENSDLEG00000007525 #11 SPSB3 (ENSDLEG00000007517) #12 MRPS34 (ENSDLEG00000007513) #14 NME3 (ENSDLEG00000007506) #15 MAPK8IP3 (ENSDLEG00000007432) #16 JPT2 (ENSDLEG00000007393) #17 CRAMP1 (ENSDLEG00000007347) #18 TMEM204 (ENSDLEG00000007342) #19 IFT140 (ENSDLEG00000007323) #20 TELO2 (ENSDLEG00000007302) #21 PTX4 (ENSDLEG00000007294) #22 CLCN7 (ENSDLEG00000007278) #23 PERCC1 (ENSDLEG00000007267) CUNH16orf91 (ENSDLEG00000007246) #25 UNKL (ENSDLEG00000007219) #26 GNPTG (ENSDLEG00000007174) #27 TSR3 (ENSDLEG00000007161) #28 BAIAP3 (ENSDLEG00000007093) #29 UBE2I (ENSDLEG00000007079) #30 ENSDLEG00000007070 ENSDLEG00000007061 ENSDLEG00000007050 CACNA1H (ENSDLEG00000005946) #34 ENSDLEG00000005754 TEKT4 (ENSDLEG00000005732) C1QTNF8 (ENSDLEG00000005720) #35 Dolphin MODERN SPECIES 3201 TMEM204 (ENSTTRG00000011999) #19 IFT140 (ENSTTRG00000011998) #20 TELO2 (ENSTTRG00000011997) #21 PTX4 (ENSTTRG00000011996) #22 CLCN7 (ENSTTRG00000011995) #23 CCDC154 (ENSTTRG00000011993) #24 ENSTTRG00000011990 #25 ENSTTRG00000011985 #26 GNPTG (ENSTTRG00000011982) #27 TSR3 (ENSTTRG00000011979) #28 BAIAP3 (ENSTTRG00000011958) #29 UBE2I (ENSTTRG00000011952) #30 Camelidae ANCESTRAL SPECIES 33 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.g.b #31 ENSGT00940000158868.g.a #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00950000182894.B ENSGT00940000163090 #35 Arabian camel MODERN SPECIES 41 ENSCDRG00005012343 #7 FAHD1 (ENSCDRG00005012307) #8 HAGH (ENSCDRG00005012164) #9 IGFALS (ENSCDRG00005012131) #10 NUBP2 (ENSCDRG00005012000) #11 SPSB3 (ENSCDRG00005011937) #12 EME2 (ENSCDRG00005011861) #13 MRPS34 (ENSCDRG00005011817) #14 NME3 (ENSCDRG00005011755) #15 MAPK8IP3 (ENSCDRG00005011576) #16 JPT2 (ENSCDRG00005011470) #17 CRAMP1 (ENSCDRG00005011383) #18 TMEM204 (ENSCDRG00005011342) #19 IFT140 (ENSCDRG00005010873) #20 TELO2 (ENSCDRG00005010691) #21 PTX4 (ENSCDRG00005010607) #22 CLCN7 (ENSCDRG00005010187) #23 CCDC154 (ENSCDRG00005010003) #24 PERCC1 (ENSCDRG00005009982) UQCC4 (ENSCDRG00005009947) #25 UNKL (ENSCDRG00005009857) #26 GNPTG (ENSCDRG00005009569) #27 TSR3 (ENSCDRG00005009515) #28 BAIAP3 (ENSCDRG00005008932) #29 UBE2I (ENSCDRG00005015631) #30 ENSCDRG00005015591 #31 ENSCDRG00005014740 #31 ENSCDRG00005014672 ENSCDRG00005014560 ENSCDRG00005014416 ENSCDRG00005014209 Laurasiatheria_b ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Carnivora ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Caniformia ANCESTRAL SPECIES 8 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000155138.f ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 ENSGT00950000182894.B Caniformia_b ANCESTRAL SPECIES 7 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000155138.f ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 Ursidae ANCESTRAL SPECIES 3 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000155138.f ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 Ursus ANCESTRAL SPECIES 9 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT01100000263714 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 American black bear MODERN SPECIES 20 FAHD1 (ENSUAMG00000013331) #8 HAGH (ENSUAMG00000013330) #9 IGFALS (ENSUAMG00000013329) #10 NUBP2 (ENSUAMG00000013327) #11 SPSB3 (ENSUAMG00000013326) #12 EME2 (ENSUAMG00000013324) #13 MRPS34 (ENSUAMG00000013323) #14 NME3 (ENSUAMG00000013321) #15 MAPK8IP3 (ENSUAMG00000013316) #16 JPT2 (ENSUAMG00000013315) #17 CRAMP1 (ENSUAMG00000013313) #18 TMEM204 (ENSUAMG00000013309) #19 IFT140 (ENSUAMG00000013306) #20 TELO2 (ENSUAMG00000013302) #21 PTX4 (ENSUAMG00000013300) #22 CLCN7 (ENSUAMG00000013295) #23 CCDC154 (ENSUAMG00000013288) #24 UQCC4 (ENSUAMG00000013285) #25 ENSUAMG00000013279 #26 GNPTG (ENSUAMG00000013274) #27 TSR3 (ENSUAMG00000013272) #28 UBE2I (ENSUAMG00000013240) #30 ENSUAMG00000013236 #30 ENSUAMG00000013123 #31 ENSUAMG00000013116 ENSUAMG00000012985 CACNA1H (ENSUAMG00000012808) #34 ENSUAMG00000012781 TEKT4 (ENSUAMG00000012778) C1QTNF8 (ENSUAMG00000012775) #35 Polar bear MODERN SPECIES 200 RPS2 (ENSUMAG00000022123) NDUFB10 (ENSUMAG00000022118) RPL3L (ENSUMAG00000022104) ENSUMAG00000022090 ENSUMAG00000022070 #7 FAHD1 (ENSUMAG00000022065) #8 HAGH (ENSUMAG00000022061) #9 NUBP2 (ENSUMAG00000022054) #11 SPSB3 (ENSUMAG00000022049) #12 MAPK8IP3 (ENSUMAG00000021776) #16 JPT2 (ENSUMAG00000021688) #17 CRAMP1 (ENSUMAG00000021635) #18 TMEM204 (ENSUMAG00000021614) #19 IFT140 (ENSUMAG00000021605) #20 TELO2 (ENSUMAG00000021492) #21 PTX4 (ENSUMAG00000021453) #22 CLCN7 (ENSUMAG00000021373) #23 ENSUMAG00000021354 #25 ENSUMAG00000021347 #28 GNPTG (ENSUMAG00000021320) #27 ENSUMAG00000021305 #30 ENSUMAG00000021302 #30 ENSUMAG00000021227 #31 ENSUMAG00000021206 ENSUMAG00000021203 ENSUMAG00000021198 #34 C1QTNF8 (ENSUMAG00000021194) #35 ENSUMAG00000021190 #36 LMF1 (ENSUMAG00000021188) #37 GNG13 (ENSUMAG00000021183) ENSUMAG00000021177 Mustelinae ANCESTRAL SPECIES 15 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00550000076453 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 ENSGT00940000159920 #36 American mink MODERN SPECIES 111 C9J0S1 (ENSNVIG00000022084) #7 FAHD1 (ENSNVIG00000022077) #8 ENSNVIG00000022054 #9 IGFALS (ENSNVIG00000022037) #10 NUBP2 (ENSNVIG00000022036) #11 SPSB3 (ENSNVIG00000022024) #12 EME2 (ENSNVIG00000022005) #13 MRPS34 (ENSNVIG00000021989) #14 ENSNVIG00000021975 #15 MAPK8IP3 (ENSNVIG00000019434) #16 JPT2 (ENSNVIG00000019338) #17 CRAMP1 (ENSNVIG00000019268) #18 TM204 (ENSNVIG00000019228) #19 IFT140 (ENSNVIG00000019190) #20 TELO2 (ENSNVIG00000019150) #21 PTX4 (ENSNVIG00000019142) #22 CLCN7 (ENSNVIG00000019024) #23 CCDC154 (ENSNVIG00000018991) #24 UQCC4 (ENSNVIG00000018965) #25 UNKL (ENSNVIG00000018903) #26 GNPTG (ENSNVIG00000018874) #27 TSR3 (ENSNVIG00000018868) #28 BAIAP3 (ENSNVIG00000018645) #29 UBE2I (ENSNVIG00000018606) #30 ENSNVIG00000018382 ENSNVIG00000018349 CACNA1H (ENSNVIG00000016544) #34 ENSNVIG00000016480 TEKT4 (ENSNVIG00000016420) SSTR5 (ENSNVIG00000016374) SOX8 (ENSNVIG00000016342) #36 Canidae ANCESTRAL SPECIES 3 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.db.a #30 ENSGT00940000158868.h #31 ENSGT00940000155138.f ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Canis_lupus ANCESTRAL SPECIES 2 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.db.a #30 ENSGT00390000016475.o ENSGT00940000158868.h #31 ENSGT00940000162207 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Dog MODERN SPECIES 34 HS3ST6 (ENSCAFG00845018590) ENSCAFG00845018651 #7 HAGH (ENSCAFG00845018825) #9 FAHD1 (ENSCAFG00845019076) #8 IGFALS (ENSCAFG00845019117) #10 NUBP2 (ENSCAFG00845019149) #11 SPSB3 (ENSCAFG00845019224) #12 ENSCAFG00845019435 #13 MRPS34 (ENSCAFG00845019497) #14 MAPK8IP3 (ENSCAFG00845019811) #16 JPT2 (ENSCAFG00845020882) #17 CRAMP1 (ENSCAFG00845020921) #18 IFT140 (ENSCAFG00845021074) #20 ENSCAFG00845021199 #19 TELO2 (ENSCAFG00845021282) #21 PTX4 (ENSCAFG00845021394) #22 CLCN7 (ENSCAFG00845021512) #23 CCDC154 (ENSCAFG00845022050) #24 PERCC1 (ENSCAFG00845022143) ENSCAFG00845022174 #28 C6H16orf91 (ENSCAFG00845022262) #25 UNKL (ENSCAFG00845022286) #26 ENSCAFG00845022697 ENSCAFG00845022755 #31 ENSCAFG00845022862 CACNA1H (ENSCAFG00845023354) #34 ENSCAFG00845024542 ENSCAFG00845024614 ENSCAFG00845024643 SSTR5 (ENSCAFG00845024735) SOX8 (ENSCAFG00845024796) #36 Dingo MODERN SPECIES 172 HS3ST6 (ENSCAFG00020000329) ENSCAFG00020000382 #7 FAHD1 (ENSCAFG00020000583) #8 HAGH (ENSCAFG00020000595) #9 IGFALS (ENSCAFG00020000602) #10 NUBP2 (ENSCAFG00020000610) #11 SPSB3 (ENSCAFG00020000616) #12 EME2 (ENSCAFG00020000621) #13 MRPS34 (ENSCAFG00020000675) #14 MAPK8IP3 (ENSCAFG00020000709) #16 JPT2 (ENSCAFG00020000738) #17 CRAMP1 (ENSCAFG00020000788) #18 IFT140 (ENSCAFG00020001129) #20 TMEM204 (ENSCAFG00020001166) #19 TELO2 (ENSCAFG00020001179) #21 PTX4 (ENSCAFG00020001191) #22 CLCN7 (ENSCAFG00020001216) #23 CCDC154 (ENSCAFG00020001227) #24 UQCC4 (ENSCAFG00020001278) #25 UNKL (ENSCAFG00020001284) #26 GNPTG (ENSCAFG00020001337) #27 TSR3 (ENSCAFG00020001344) #28 BAIAP3 (ENSCAFG00020001352) #29 ENSCAFG00020001370 #30 ENSCAFG00020001407 ENSCAFG00020001432 #31 ENSCAFG00020001442 CACNA1H (ENSCAFG00020002134) #34 ENSCAFG00020008579 TEKT4 (ENSCAFG00020008580) SSTR5 (ENSCAFG00020008586) Red fox MODERN SPECIES 200 RPL3L (ENSVVUG00000009805) MSRB1 (ENSVVUG00000009825) HS3ST6 (ENSVVUG00000009829) MEIOB (ENSVVUG00000009837) #7 FAHD1 (ENSVVUG00000009934) #8 HAGH (ENSVVUG00000009937) #9 IGFALS (ENSVVUG00000009953) #10 NUBP2 (ENSVVUG00000009958) #11 SPSB3 (ENSVVUG00000009994) #12 MRPS34 (ENSVVUG00000010000) #14 MAPK8IP3 (ENSVVUG00000010026) #16 JPT2 (ENSVVUG00000010820) #18 IFT140 (ENSVVUG00000010908) #20 TMEM204 (ENSVVUG00000010997) #19 TELO2 (ENSVVUG00000011008) #21 PTX4 (ENSVVUG00000011033) #22 CLCN7 (ENSVVUG00000011067) #23 CCDC154 (ENSVVUG00000011157) #24 TSR3 (ENSVVUG00000011174) #28 UNKL (ENSVVUG00000011182) #26 GNPTG (ENSVVUG00000011194) #27 BAIAP3 (ENSVVUG00000011214) #29 ENSVVUG00000011291 #30 ENSVVUG00000011321 #31 ENSVVUG00000011324 ENSVVUG00000011326 CACNA1H (ENSVVUG00000011333) #34 ENSVVUG00000011368 TEKT4 (ENSVVUG00000011371) ENSVVUG00000011376 SOX8 (ENSVVUG00000011383) #36 Felidae ANCESTRAL SPECIES 25 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.m #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000163159.a.b ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 Panthera ANCESTRAL SPECIES 29 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.m #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000163159.a.b Tiger MODERN SPECIES 590 ENSPTIG00000010284 NDUFB10 (ENSPTIG00000009910) RPL3L (ENSPTIG00000009722) MSRB1 (ENSPTIG00000009446) HS3ST6 (ENSPTIG00000009671) ENSPTIG00000009036 #7 FAHD1 (ENSPTIG00000009011) #8 HAGH (ENSPTIG00000008853) #9 NUBP2 (ENSPTIG00000008814) #11 EME2 (ENSPTIG00000008505) #13 MAPK8IP3 (ENSPTIG00000007779) #16 JPT2 (ENSPTIG00000007704) #17 TMEM204 (ENSPTIG00000006591) #19 IFT140 (ENSPTIG00000005835) #20 TELO2 (ENSPTIG00000005753) #21 PTX4 (ENSPTIG00000005448) #22 CLCN7 (ENSPTIG00000005037) #23 UNKL (ENSPTIG00000000863) #26 TSR3 (ENSPTIG00000000359) #28 UBE2I (ENSPTIG00000021666) #30 ENSPTIG00000021646 #31 ENSPTIG00000021566 #31 Panthera_a ANCESTRAL SPECIES 31 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822.m #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163159.b.a ENSGT00940000163159.a.b lion MODERN SPECIES 16 ENSPLOG00000014482 #7 FAHD1 (ENSPLOG00000014422) #8 HAGH (ENSPLOG00000014311) #9 IGFALS (ENSPLOG00000014256) #10 NUBP2 (ENSPLOG00000014050) #11 SPSB3 (ENSPLOG00000013972) #12 EME2 (ENSPLOG00000013867) #13 MRPS34 (ENSPLOG00000013830) #14 NME3 (ENSPLOG00000013752) #15 MAPK8IP3 (ENSPLOG00000012791) #16 JPT2 (ENSPLOG00000012622) #17 CRAMP1 (ENSPLOG00000011890) #18 TMEM204 (ENSPLOG00000011810) #19 IFT140 (ENSPLOG00000011769) #20 TELO2 (ENSPLOG00000011575) #21 PTX4 (ENSPLOG00000011504) #22 CLCN7 (ENSPLOG00000011352) #23 CCDC154 (ENSPLOG00000011307) #24 PERCC1 (ENSPLOG00000011277) UQCC4 (ENSPLOG00000011247) #25 ENSPLOG00000018710 #26 ENSPLOG00000018640 #26 GNPTG (ENSPLOG00000018526) #27 TSR3 (ENSPLOG00000018457) #28 BAIAP3 (ENSPLOG00000016379) #29 UBE2I (ENSPLOG00000016088) #30 ENSPLOG00000015498 #31 ENSPLOG00000014879 #31 ENSPLOG00000014402 ENSPLOG00000014312 leopard MODERN SPECIES 53 ENSPPRG00000011909 #7 FAHD1 (ENSPPRG00000012078) #8 HAGH (ENSPPRG00000012875) #9 IGFALS (ENSPPRG00000013707) #10 NUBP2 (ENSPPRG00000017030) #11 SPSB3 (ENSPPRG00000018726) #12 EME2 (ENSPPRG00000020258) #13 MRPS34 (ENSPPRG00000021470) #14 ENSPPRG00000021662 #15 MAPK8IP3 (ENSPPRG00000001108) #16 JPT2 (ENSPPRG00000001951) #17 CRAMP1 (ENSPPRG00000003952) #18 TMEM204 (ENSPPRG00000004432) #19 IFT140 (ENSPPRG00000005374) #20 TELO2 (ENSPPRG00000006967) #21 PTX4 (ENSPPRG00000009473) #22 CLCN7 (ENSPPRG00000012073) #23 CCDC154 (ENSPPRG00000013178) #24 PERCC1 (ENSPPRG00000013524) UQCC4 (ENSPPRG00000013700) #25 UNKL (ENSPPRG00000018472) #26 GNPTG (ENSPPRG00000022265) #27 ENSPPRG00000022569 TSR3 (ENSPPRG00000023265) #28 BAIAP3 (ENSPPRG00000010898) #29 UBE2I (ENSPPRG00000012596) #30 ENSPPRG00000012866 #31 ENSPPRG00000013046 #31 Cat MODERN SPECIES 247 MEIOB (ENSFCAG00000011733) #7 FAHD1 (ENSFCAG00000031483) #8 HAGH (ENSFCAG00000011731) #9 IGFALS (ENSFCAG00000040872) #10 NUBP2 (ENSFCAG00000024659) #11 SPSB3 (ENSFCAG00000011730) #12 EME2 (ENSFCAG00000011728) #13 MRPS34 (ENSFCAG00000022788) #14 NME3 (ENSFCAG00000046405) #15 MAPK8IP3 (ENSFCAG00000011724) #16 JPT2 (ENSFCAG00000034589) #17 CRAMP1 (ENSFCAG00000011852) #18 IFT140 (ENSFCAG00000010653) #20 TMEM204 (ENSFCAG00000033771) #19 TELO2 (ENSFCAG00000010652) #21 PTX4 (ENSFCAG00000043223) #22 CLCN7 (ENSFCAG00000010650) #23 CCDC154 (ENSFCAG00000010649) #24 PERCC1 (ENSFCAG00000043313) UQCC4 (ENSFCAG00000040994) #25 UNKL (ENSFCAG00000010643) #26 ENSFCAG00000049219 GNPTG (ENSFCAG00000010641) #27 TSR3 (ENSFCAG00000029607) #28 UBE2I (ENSFCAG00000027291) #30 ENSFCAG00000050454 #31 ENSFCAG00000047634 ENSFCAG00000004650 CACNA1H (ENSFCAG00000018843) #34 ENSFCAG00000053055 ENSFCAG00000039363 Laurasiatheria_c ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 ENSGT00950000182894.B Equus ANCESTRAL SPECIES 32 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000162207 ENSGT00940000163349 #33 ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00550000076453 ENSGT00950000182894.B Horse MODERN SPECIES 4 ENSECAG00000057961 FAHD1 (ENSECAG00000004353) #8 HAGH (ENSECAG00000005471) #9 IGFALS (ENSECAG00000039211) #10 NUBP2 (ENSECAG00000012545) #11 SPSB3 (ENSECAG00000013413) #12 EME2 (ENSECAG00000016045) #13 MRPS34 (ENSECAG00000016370) #14 NME3 (ENSECAG00000038477) #15 MAPK8IP3 (ENSECAG00000016379) #16 JPT2 (ENSECAG00000026941) #17 CRAMP1 (ENSECAG00000023299) #18 IFT140 (ENSECAG00000009031) #20 TMEM204 (ENSECAG00000015576) #19 TELO2 (ENSECAG00000017413) #21 PTX4 (ENSECAG00000023063) #22 CLCN7 (ENSECAG00000023236) #23 CCDC154 (ENSECAG00000009445) #24 PERCC1 (ENSECAG00000043201) ENSECAG00000054454 #25 UNKL (ENSECAG00000010641) #26 GNPTG (ENSECAG00000011390) #27 TSR3 (ENSECAG00000013501) #28 BAIAP3 (ENSECAG00000014225) #29 UBE2I (ENSECAG00000015831) #30 ENSECAG00000017238 TPSG1 (ENSECAG00000021470) #33 CACNA1H (ENSECAG00000022241) #34 ENSECAG00000028918 TEKT4 (ENSECAG00000014654) C1QTNF8 (ENSECAG00000030694) #35 Donkey MODERN SPECIES 5 HAGH (ENSEASG00005004592) #9 IGFALS (ENSEASG00005004586) #10 NUBP2 (ENSEASG00005035230) #11 SPSB3 (ENSEASG00005026398) #12 ENSEASG00005025437 #13 ENSEASG00005025961 #14 NME3 (ENSEASG00005035536) #15 ENSEASG00005001955 #16 ENSEASG00005034484 #16 ENSEASG00005038396 #16 JPT2 (ENSEASG00005025904) #17 CRAMP1 (ENSEASG00005001568) #18 TMEM204 (ENSEASG00005001516) #19 IFT140 (ENSEASG00005001221) #20 TELO2 (ENSEASG00005000596) #21 PTX4 (ENSEASG00005036837) #22 CLCN7 (ENSEASG00005000520) #23 CCDC154 (ENSEASG00005000415) #24 PERCC1 (ENSEASG00005027506) ENSEASG00005034982 #25 UNKL (ENSEASG00005000274) #26 ENSEASG00005000258 #27 TSR3 (ENSEASG00005000250) #28 ENSEASG00005000233 #29 UBE2I (ENSEASG00005000142) #30 ENSEASG00005000111 TPSG1 (ENSEASG00005035742) #33 CACNA1H (ENSEASG00005018512) #34 ENSEASG00005030738 ENSEASG00005038132 ENSEASG00005018505 Chiroptera ANCESTRAL SPECIES 12 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000156666.g #34 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 ENSGT00940000159920 #36 ENSGT00530000063702.b #37 Microchiroptera ANCESTRAL SPECIES 17 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868.h #31 ENSGT00940000156666.g #34 ENSGT00950000182894.B ENSGT00940000163090 #35 ENSGT00940000160265 ENSGT00940000159920 #36 ENSGT00530000063702.b #37 Microbat MODERN SPECIES 1269 ENSMLUG00000000791 #7 FAHD1 (ENSMLUG00000000789) #8 HAGH (ENSMLUG00000000782) #9 IGFALS (ENSMLUG00000000776) #10 NUBP2 (ENSMLUG00000000768) #11 SPSB3 (ENSMLUG00000028814) #12 EME2 (ENSMLUG00000000758) #13 MRPS34 (ENSMLUG00000028772) #14 NME3 (ENSMLUG00000000754) #15 MAPK8IP3 (ENSMLUG00000000736) #16 JPT2 (ENSMLUG00000000730) #17 CRAMP1 (ENSMLUG00000000709) #18 TMEM204 (ENSMLUG00000010040) #19 IFT140 (ENSMLUG00000009987) #20 TELO2 (ENSMLUG00000011527) #21 PTX4 (ENSMLUG00000011561) #22 CLCN7 (ENSMLUG00000011575) #23 CCDC154 (ENSMLUG00000011607) #24 Greater horseshoe bat MODERN SPECIES 47 HS3ST6 (ENSRFEG00010020816) ENSRFEG00010020743 #7 FAHD1 (ENSRFEG00010020709) #8 HAGH (ENSRFEG00010020660) #9 IGFALS (ENSRFEG00010020626) #10 NUBP2 (ENSRFEG00010020577) #11 SPSB3 (ENSRFEG00010020550) #12 EME2 (ENSRFEG00010020532) #13 MRPS34 (ENSRFEG00010020489) #14 MAPK8IP3 (ENSRFEG00010020345) #16 JPT2 (ENSRFEG00010020239) #17 CRAMP1 (ENSRFEG00010020192) #18 TMEM204 (ENSRFEG00010020163) #19 IFT140 (ENSRFEG00010020088) #20 TELO2 (ENSRFEG00010020015) #21 PTX4 (ENSRFEG00010019992) #22 CLCN7 (ENSRFEG00010019806) #23 CCDC154 (ENSRFEG00010019563) #24 UQCC4 (ENSRFEG00010019421) #25 UNKL (ENSRFEG00010019360) #26 GNPTG (ENSRFEG00010019317) #27 TSR3 (ENSRFEG00010019277) #28 BAIAP3 (ENSRFEG00010019213) #29 UBE2I (ENSRFEG00010019169) #30 ENSRFEG00010019105 #31 ENSRFEG00010019082 ENSRFEG00010019023 ENSRFEG00010018680 ENSRFEG00010018612 CACNA1H (ENSRFEG00010018539) #34 TEKT4 (ENSRFEG00010018476) Megabat MODERN SPECIES 3528 HS3ST6 (ENSPVAG00000016696) ENSPVAG00000016695 #7 HAGH (ENSPVAG00000016691) #9 NUBP2 (ENSPVAG00000016689) #11 SPSB3 (ENSPVAG00000016687) #12 EME2 (ENSPVAG00000016683) #13 MRPS34 (ENSPVAG00000016682) #14 NME3 (ENSPVAG00000016681) #15 MAPK8IP3 (ENSPVAG00000016674) #16 JPT2 (ENSPVAG00000016673) #17 CRAMP1 (ENSPVAG00000016669) #18 ENSPVAG00000016665 TMEM204 (ENSPVAG00000016663) #19 IFT140 (ENSPVAG00000016662) #20 TELO2 (ENSPVAG00000016661) #21 PTX4 (ENSPVAG00000016660) #22 CLCN7 (ENSPVAG00000016657) #23 CCDC154 (ENSPVAG00000016655) #24 ENSPVAG00000016651 #25 ENSPVAG00000016649 #26 GNPTG (ENSPVAG00000016648) #27 TSR3 (ENSPVAG00000016647) #28 BAIAP3 (ENSPVAG00000016645) #29 Eulipotyphla ANCESTRAL SPECIES ENSGT01100000263515.a.a #22 Common shrew MODERN SPECIES 4890 ENSSARG00000010750 #22 Atlantogenata ANCESTRAL SPECIES 32 ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 Afrotheria ANCESTRAL SPECIES 30 ENSGT00510000047678 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 Afrotheria_a ANCESTRAL SPECIES 29 ENSGT00510000047678 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00530000063937.b #13 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 Hyrax MODERN SPECIES 22 ENSPCAG00000017071 #21 PTX4 (ENSPCAG00000017070) #22 CLCN7 (ENSPCAG00000017068) #23 ENSPCAG00000017066 #24 ENSPCAG00000017062 ENSPCAG00000017060 #26 ENSPCAG00000017058 #27 Elephant MODERN SPECIES 442 RPL3L (ENSLAFG00000016587) ENSLAFG00000016584 #20 HS3ST6 (ENSLAFG00000001051) ENSLAFG00000008142 #7 FAHD1 (ENSLAFG00000008141) #8 HAGH (ENSLAFG00000032140) #9 SPSB3 (ENSLAFG00000028630) #12 ENSLAFG00000023334 MRPS34 (ENSLAFG00000022475) #14 MAPK8IP3 (ENSLAFG00000028194) #16 JPT2 (ENSLAFG00000016324) #17 CRAMP1 (ENSLAFG00000020604) #18 ENSLAFG00000003286 #20 TMEM204 (ENSLAFG00000017196) #19 TELO2 (ENSLAFG00000003284) #21 PTX4 (ENSLAFG00000012669) #22 CLCN7 (ENSLAFG00000003618) #23 ENSLAFG00000004047 #24 UQCC4 (ENSLAFG00000026451) #25 UNKL (ENSLAFG00000018262) #26 GNPTG (ENSLAFG00000010446) #27 TSR3 (ENSLAFG00000026304) #28 BAIAP3 (ENSLAFG00000007230) #29 UBE2I (ENSLAFG00000018318) #30 ENSLAFG00000031398 #31 ENSLAFG00000007069 ENSLAFG00000027170 CACNA1H (ENSLAFG00000029595) #34 TEKT4 (ENSLAFG00000028197) SSTR5 (ENSLAFG00000010648) SOX8 (ENSLAFG00000010824) #36 Tenrec MODERN SPECIES 6101 ENSETEG00000002866 #22 ENSETEG00000002862 Marsupialia ANCESTRAL SPECIES 6 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a #30 ENSGT00940000158868 #31 ENSGT00940000162207.lb.a ENSGT00940000162207.mb ENSGT00940000162207.lb.b ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B Marsupialia_b ANCESTRAL SPECIES 11 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.rb.b #30 ENSGT00940000158868 #31 ENSGT00940000162207.lb.a ENSGT00940000162207.mb ENSGT00940000162207.lb.b ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B Diprotodontia ANCESTRAL SPECIES 19 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.rb.b #30 ENSGT00940000158868 #31 ENSGT00940000162207.lb.a ENSGT00940000162207.mb ENSGT00940000162207.lb.b ENSGT00940000156666 #34 ENSGT00960000187025 ENSGT00950000182894.B Diprotodontia_a ANCESTRAL SPECIES 21 ENSGT00940000154768.B ENSGT00390000001723 #7 ENSGT00940000160452 #8 ENSGT00940000159176 #9 ENSGT00940000160824 #10 ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.b #12 ENSGT00390000008964 #14 ENSGT00940000161283 #15 ENSGT00940000153496.a.a #16 ENSGT00390000007652 #17 ENSGT00390000003337 #18 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00510000049652 #25 ENSGT00940000158822 #26 ENSGT00510000048359 #27 ENSGT00390000014665 #28 ENSGT00730000110939.a #29 ENSGT00550000075088.a.a.rb.b #30 ENSGT00940000162162.b.a.a.b.a ENSGT00940000158868 #31 ENSGT00940000162207.lb.a ENSGT00940000162207.mb ENSGT00940000162207.lb.b ENSGT00940000156666 #34 ENSGT00960000187025 Common wonbat MODERN SPECIES 1009 MSRB1 (ENSVURG00010010897) ENSVURG00010010904 ENSVURG00010010911 #7 HAGH (ENSVURG00010010956) #9 FAHD1 (ENSVURG00010011002) #8 IGFALS (ENSVURG00010011011) #10 NUBP2 (ENSVURG00010011022) #11 SPSB3 (ENSVURG00010011033) #12 MRPS34 (ENSVURG00010011039) #14 NME3 (ENSVURG00010011044) #15 MAPK8IP3 (ENSVURG00010011078) #16 CRAMP1 (ENSVURG00010011179) #18 IFT140 (ENSVURG00010011205) #20 TMEM204 (ENSVURG00010011226) #19 TELO2 (ENSVURG00010011232) #21 PTX4 (ENSVURG00010011243) #22 CLCN7 (ENSVURG00010011261) #23 ENSVURG00010011295 ENSVURG00010011316 #25 UNKL (ENSVURG00010011333) #26 GNPTG (ENSVURG00010011357) #27 TSR3 (ENSVURG00010011369) #28 BAIAP3 (ENSVURG00010011383) #29 UBE2I (ENSVURG00010011439) #30 ENSVURG00010011474 ENSVURG00010011524 #31 ENSVURG00010011970 ENSVURG00010011978 CACNA1H (ENSVURG00010012158) #34 TEKT4 (ENSVURG00010015184) ENSVURG00010015205 #35 koala MODERN SPECIES 116 HS3ST6 (ENSPCIG00000017369) ENSPCIG00000017363 #7 FAHD1 (ENSPCIG00000017360) #8 HAGH (ENSPCIG00000017282) #9 IGFALS (ENSPCIG00000017281) #10 NUBP2 (ENSPCIG00000017280) #11 SPSB3 (ENSPCIG00000017279) #12 MRPS34 (ENSPCIG00000017278) #14 NME3 (ENSPCIG00000017277) #15 MAPK8IP3 (ENSPCIG00000017276) #16 JPT2 (ENSPCIG00000017275) #17 CRAMP1 (ENSPCIG00000017274) #18 TMEM204 (ENSPCIG00000017273) #19 ENSPCIG00000017270 #20 TELO2 (ENSPCIG00000017263) #21 PTX4 (ENSPCIG00000017260) #22 CLCN7 (ENSPCIG00000015643) #23 ENSPCIG00000031234 #24 ENSPCIG00000015640 #25 UNKL (ENSPCIG00000015633) #26 GNPTG (ENSPCIG00000015631) #27 TSR3 (ENSPCIG00000015629) #28 BAIAP3 (ENSPCIG00000015622) #29 UBE2I (ENSPCIG00000015620) #30 ENSPCIG00000015617 ENSPCIG00000036953 ENSPCIG00000026546 ENSPCIG00000026547 ENSPCIG00000036999 #31 ENSPCIG00000032535 ENSPCIG00000036431 Wallaby MODERN SPECIES 7575 TMEM204 (ENSMEUG00000015619) #19 IFT140 (ENSMEUG00000015593) #20 TELO2 (ENSMEUG00000015571) #21 ENSMEUG00000015563 #22 Opossum MODERN SPECIES 5 HS3ST6 (ENSMODG00000016042) ENSMODG00000016106 #7 FAHD1 (ENSMODG00000016110) #8 ENSMODG00000016115 #9 IGFALS (ENSMODG00000016108) #10 NUBP2 (ENSMODG00000016119) #11 SPSB3 (ENSMODG00000016123) #12 ENSMODG00000016134 #15 MAPK8IP3 (ENSMODG00000016149) #16 JPT2 (ENSMODG00000016153) #17 CRAMP1 (ENSMODG00000016154) #18 TMEM204 (ENSMODG00000016163) #19 IFT140 (ENSMODG00000016160) #20 TELO2 (ENSMODG00000016164) #21 ENSMODG00000016174 ENSMODG00000016175 #22 CLCN7 (ENSMODG00000016179) #23 ENSMODG00000016183 #24 ENSMODG00000016185 #25 UNKL (ENSMODG00000016188) #26 GNPTG (ENSMODG00000016192) #27 TSR3 (ENSMODG00000016193) #28 BAIAP3 (ENSMODG00000016195) #29 UBE2I (ENSMODG00000016199) #30 ENSMODG00000016201 ENSMODG00000042536 ENSMODG00000016208 ENSMODG00000047196 #31 ENSMODG00000016952 ENSMODG00000016945 ENSMODG00000049394 Sauria ANCESTRAL SPECIES 42 ENSGT00940000159318 ENSGT00940000155280 ENSGT00940000160872 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00940000162979 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Archelosauria ANCESTRAL SPECIES 12 ENSGT00390000014091 ENSGT00940000163050.o.b ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00390000017673.a ENSGT00940000157696 ENSGT00940000162979 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Archosauria ANCESTRAL SPECIES 8 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000163050.o.b.a ENSGT00940000163050.o.b.b ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Aves ANCESTRAL SPECIES 11 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000163050.o.b.a ENSGT00940000163050.o.b.b ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Neognathae ANCESTRAL SPECIES 10 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00940000163677.a.b.b.n ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Galloanserae ANCESTRAL SPECIES 9 ENSGT00940000155577 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Anatidae ANCESTRAL SPECIES 7 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000163050.o.b.a ENSGT00940000163050.o.b.b ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 Pink-footed goose MODERN SPECIES 61 ADCY9 (ENSABRG00000022849) CREBBP (ENSABRG00000022846) TRAP1 (ENSABRG00000022845) SLX4 (ENSABRG00000022843) ENSABRG00000022842 HMOX2 (ENSABRG00000022841) CDIP1 (ENSABRG00000022840) UBALD1 (ENSABRG00000022838) MGRN1 (ENSABRG00000022837) NUDT16L1 (ENSABRG00000022836) NAA60 (ENSABRG00000022834) INTS15 (ENSABRG00000022832) ENSABRG00000022831 DNASE1L2 (ENSABRG00000022830) ECI1 (ENSABRG00000022829) PTX4 (ENSABRG00000022828) #22 CLCN7 (ENSABRG00000022824) #23 ENSABRG00000022823 LUC7L (ENSABRG00000022820) FAM234A (ENSABRG00000022813) RGS11 (ENSABRG00000022807) ARHGDIG (ENSABRG00000022804) PDIA2 (ENSABRG00000022802) AXIN1 (ENSABRG00000022795) MRPL28 (ENSABRG00000022794) PGAP6 (ENSABRG00000022791) ENSABRG00000022723 HBZ (ENSABRG00000022690) NPRL3 (ENSABRG00000022687) MPG (ENSABRG00000022686) RHBDF1 (ENSABRG00000022684) Duck MODERN SPECIES 6 ENSAPLG00000023899 ENSAPLG00000017631 ADCY9 (ENSAPLG00000015325) CREBBP (ENSAPLG00000015596) ENSAPLG00000027970 TRAP1 (ENSAPLG00000016060) SLX4 (ENSAPLG00000029433) ENSAPLG00000030815 HMOX2 (ENSAPLG00000002475) CDIP1 (ENSAPLG00000029972) NAA60 (ENSAPLG00000008720) INTS15 (ENSAPLG00000008674) ENSAPLG00000021029 DNASE1L2 (ENSAPLG00000008612) ENSAPLG00000008466 PTX4 (ENSAPLG00000024719) #22 CLCN7 (ENSAPLG00000007385) #23 LUC7L (ENSAPLG00000007050) FAM234A (ENSAPLG00000006890) ENSAPLG00000027758 ARHGDIG (ENSAPLG00000004065) PDIA2 (ENSAPLG00000006378) AXIN1 (ENSAPLG00000006260) MRPL28 (ENSAPLG00000006257) PGAP6 (ENSAPLG00000006045) ENSAPLG00000016406 HBZ (ENSAPLG00000005686) NPRL3 (ENSAPLG00000005274) MPG (ENSAPLG00000005267) RHBDF1 (ENSAPLG00000004575) ENSAPLG00000018296 Phasianidae ANCESTRAL SPECIES 10 ENSGT00940000155577.d ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT01020000230627.b ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 Phasianidae_b ANCESTRAL SPECIES 10 ENSGT00940000155577.d ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00940000170883 ENSGT00390000015916 Turkey MODERN SPECIES 7 ENSMGAG00000008758 ENSMGAG00000008823 ENSMGAG00000008803 ENSMGAG00000008793 ENSMGAG00000008833 ENSMGAG00000008848 ENSMGAG00000008924 ENSMGAG00000008858 ENSMGAG00000008900 ENSMGAG00000020388 ENSMGAG00000008960 ENSMGAG00000008986 #23 ENSMGAG00000009109 ENSMGAG00000020915 ENSMGAG00000009080 ENSMGAG00000009077 #22 ENSMGAG00000009159 ENSMGAG00000009153 ENSMGAG00000009163 UBALD1 (ENSMGAG00000020082) ENSMGAG00000009203 ENSMGAG00000009193 ENSMGAG00000017839 ENSMGAG00000009212 ENSMGAG00000009239 ENSMGAG00000009287 ENSMGAG00000021780 ENSMGAG00000009286 ENSMGAG00000020907 ENSMGAG00000009342 ENSMGAG00000022193 Neognathae_b ANCESTRAL SPECIES 12 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00940000163677.a.b.b.n ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 Passeriformes ANCESTRAL SPECIES 11 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h.b ENSGT00940000163677.a.b.b.n ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 Great tit MODERN SPECIES 5 TRAP1 (ENSPMJG00000010191) SLX4 (ENSPMJG00000010192) ENSPMJG00000010193 ENSPMJG00000010194 HMOX2 (ENSPMJG00000010195) CDIP1 (ENSPMJG00000010196) ENSPMJG00000010197 MGRN1 (ENSPMJG00000010199) NUDT16L1 (ENSPMJG00000010200) NAA60 (ENSPMJG00000010201) INTS15 (ENSPMJG00000010202) ENSPMJG00000010203 DNASE1 (ENSPMJG00000010204) DNASE1L2 (ENSPMJG00000010207) ECI1 (ENSPMJG00000010209) ENSPMJG00000010213 #22 CLCN7 (ENSPMJG00000010214) #23 LUC7L (ENSPMJG00000010216) FAM234A (ENSPMJG00000010218) RGS11 (ENSPMJG00000010219) ARHGDIG (ENSPMJG00000010220) PDIA2 (ENSPMJG00000010221) AXIN1 (ENSPMJG00000010223) MRPL28 (ENSPMJG00000010225) PGAP6 (ENSPMJG00000010226) ENSPMJG00000010231 ENSPMJG00000010233 HBZ (ENSPMJG00000010234) NPRL3 (ENSPMJG00000010235) MPG (ENSPMJG00000010265) RHBDF1 (ENSPMJG00000010270) Passeriformes_d ANCESTRAL SPECIES 11 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h.b ENSGT00940000163677.a.b.b.n ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859.b ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 Passeriformes_g ANCESTRAL SPECIES 12 ENSGT00940000157834 ENSGT00940000155577 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859.b ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 Passeroidea ANCESTRAL SPECIES 11 ENSGT00940000157834 ENSGT00940000155577 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859.b ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 Zebra finch MODERN SPECIES 5 SRL (ENSTGUG00000003951) ADCY9 (ENSTGUG00000003956) CREBBP (ENSTGUG00000003971) TRAP1 (ENSTGUG00000004037) SLX4 (ENSTGUG00000029145) HMOX2 (ENSTGUG00000023074) CDIP1 (ENSTGUG00000020033) UBALD1 (ENSTGUG00000004120) MGRN1 (ENSTGUG00000004130) NUDT16L1 (ENSTGUG00000004158) NAA60 (ENSTGUG00000004161) INTS15 (ENSTGUG00000004170) DNASE1 (ENSTGUG00000004177) DNASE1L2 (ENSTGUG00000023350) ECI1 (ENSTGUG00000004207) PTX4 (ENSTGUG00000022894) #22 CLCN7 (ENSTGUG00000004211) #23 PERCC1 (ENSTGUG00000004253) LUC7L (ENSTGUG00000004254) FAM234A (ENSTGUG00000004271) RGS11 (ENSTGUG00000004285) ARHGDIG (ENSTGUG00000027762) PDIA2 (ENSTGUG00000025588) AXIN1 (ENSTGUG00000004338) MRPL28 (ENSTGUG00000026234) PGAP6 (ENSTGUG00000004355) HBAA (ENSTGUG00000004372) HBAD (ENSTGUG00000004381) HBAP (ENSTGUG00000004395) NPRL3 (ENSTGUG00000004402) MPG (ENSTGUG00000004423) Common canary MODERN SPECIES 17 ADCY9 (ENSSCAG00000012535) CREBBP (ENSSCAG00000012506) TRAP1 (ENSSCAG00000012494) SLX4 (ENSSCAG00000012484) ENSSCAG00000012479 ENSSCAG00000012476 HMOX2 (ENSSCAG00000012471) CDIP1 (ENSSCAG00000012467) UBALD1 (ENSSCAG00000012464) MGRN1 (ENSSCAG00000012451) NUDT16L1 (ENSSCAG00000012445) NAA60 (ENSSCAG00000012441) DNASE1 (ENSSCAG00000012437) DNASE1L2 (ENSSCAG00000012421) ECI1 (ENSSCAG00000012419) ENSSCAG00000012418 #22 CLCN7 (ENSSCAG00000012210) #23 LUC7L (ENSSCAG00000012170) FAM234A (ENSSCAG00000012162) RGS11 (ENSSCAG00000012139) ARHGDIG (ENSSCAG00000012130) PDIA2 (ENSSCAG00000012118) AXIN1 (ENSSCAG00000012109) PGAP6 (ENSSCAG00000012105) ENSSCAG00000012102 ENSSCAG00000012099 HBZ (ENSSCAG00000012087) NPRL3 (ENSSCAG00000012076) MPG (ENSSCAG00000012069) RHBDF1 (ENSSCAG00000012050) SNRNP25 (ENSSCAG00000012038) Flycatcher MODERN SPECIES 5 CREBBP (ENSFALG00000004322) TRAP1 (ENSFALG00000004288) SLX4 (ENSFALG00000004265) ENSFALG00000027737 HMOX2 (ENSFALG00000004256) ENSFALG00000028543 CDIP1 (ENSFALG00000023450) UBALD1 (ENSFALG00000004245) MGRN1 (ENSFALG00000004243) NUDT16L1 (ENSFALG00000004240) ENSFALG00000027518 ENSFALG00000004230 ENSFALG00000004220 ENSFALG00000004209 ENSFALG00000004202 ENSFALG00000028773 #22 ENSFALG00000004168 #23 ENSFALG00000004146 ENSFALG00000024341 FAM234A (ENSFALG00000004134) RGS11 (ENSFALG00000004130) ARHGDIG (ENSFALG00000026512) ENSFALG00000026602 ENSFALG00000004121 AXIN1 (ENSFALG00000004110) MRPL28 (ENSFALG00000027058) PGAP6 (ENSFALG00000004098) ENSFALG00000024955 ENSFALG00000028867 ENSFALG00000025122 HBZ (ENSFALG00000004085) Neognathae_c ANCESTRAL SPECIES 14 ENSGT00940000155577 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000153104.h ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 Kakapo MODERN SPECIES 21 ADCY9 (ENSSHBG00005003602) CREBBP (ENSSHBG00005003497) TRAP1 (ENSSHBG00005003443) SLX4 (ENSSHBG00005003410) ENSSHBG00005003390 HMOX2 (ENSSHBG00005003381) CDIP1 (ENSSHBG00005003369) UBALD1 (ENSSHBG00005003354) MGRN1 (ENSSHBG00005003270) NUDT16L1 (ENSSHBG00005003244) NAA60 (ENSSHBG00005003231) INTS15 (ENSSHBG00005003219) DNASE1 (ENSSHBG00005003190) DNASE1L2 (ENSSHBG00005003149) ECI1 (ENSSHBG00005003129) PTX4 (ENSSHBG00005003114) #22 CLCN7 (ENSSHBG00005002882) #23 PERCC1 (ENSSHBG00005002806) LUC7L (ENSSHBG00005002771) FAM234A (ENSSHBG00005002733) RGS11 (ENSSHBG00005002700) ARHGDIG (ENSSHBG00005002666) PDIA2 (ENSSHBG00005002618) AXIN1 (ENSSHBG00005002571) MRPL28 (ENSSHBG00005002547) PGAP6 (ENSSHBG00005002495) ENSSHBG00005002456 ENSSHBG00005002441 HBZ (ENSSHBG00005002424) NPRL3 (ENSSHBG00005002397) MPG (ENSSHBG00005002363) Golden eagle MODERN SPECIES 17 ADCY9 (ENSACCG00020015094) CREBBP (ENSACCG00020015040) TRAP1 (ENSACCG00020014498) SLX4 (ENSACCG00020013908) ENSACCG00020013850 HMOX2 (ENSACCG00020013832) CDIP1 (ENSACCG00020013819) UBALD1 (ENSACCG00020013792) MGRN1 (ENSACCG00020013776) NUDT16L1 (ENSACCG00020013749) NAA60 (ENSACCG00020013711) INTS15 (ENSACCG00020013684) DNASE1 (ENSACCG00020013665) DNASE1L2 (ENSACCG00020013638) ECI1 (ENSACCG00020013609) PTX4 (ENSACCG00020013594) #22 CLCN7 (ENSACCG00020013565) #23 PERCC1 (ENSACCG00020013545) LUC7L (ENSACCG00020013518) FAM234A (ENSACCG00020013482) RGS11 (ENSACCG00020013455) ARHGDIG (ENSACCG00020013431) PDIA2 (ENSACCG00020013412) AXIN1 (ENSACCG00020013395) MRPL28 (ENSACCG00020013380) PGAP6 (ENSACCG00020013363) ENSACCG00020013348 ENSACCG00020013324 HBZ (ENSACCG00020013308) NPRL3 (ENSACCG00020013284) MPG (ENSACCG00020013257) Australian saltwater crocodile MODERN SPECIES 42 CREBBP (ENSCPRG00005002873) TRAP1 (ENSCPRG00005002925) SLX4 (ENSCPRG00005003152) ENSCPRG00005003170 ENSCPRG00005003186 HMOX2 (ENSCPRG00005003192) CDIP1 (ENSCPRG00005003195) UBALD1 (ENSCPRG00005003202) MGRN1 (ENSCPRG00005003210) ENSCPRG00005003248 NUDT16L1 (ENSCPRG00005003249) NAA60 (ENSCPRG00005003250) INTS15 (ENSCPRG00005003256) DNASE1L2 (ENSCPRG00005003263) ECI1 (ENSCPRG00005003269) PTX4 (ENSCPRG00005003274) #22 CLCN7 (ENSCPRG00005003281) #23 LUC7L (ENSCPRG00005003291) FAM234A (ENSCPRG00005003298) RGS11 (ENSCPRG00005003311) ARHGDIG (ENSCPRG00005003321) PDIA2 (ENSCPRG00005003327) AXIN1 (ENSCPRG00005003352) HBZ (ENSCPRG00005003462) NPRL3 (ENSCPRG00005003465) RBFOX1 (ENSCPRG00005003493) TMEM114 (ENSCPRG00005003530) METTL22 (ENSCPRG00005003534) ABAT (ENSCPRG00005003537) TMEM186 (ENSCPRG00005003540) PMM2 (ENSCPRG00005003541) Cryptodira ANCESTRAL SPECIES 12 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00940000163050.o.b ENSGT00390000017673.a ENSGT00940000157696 ENSGT00940000162979 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00940000162979 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r.a ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00990000212922 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916.c Emydidae ANCESTRAL SPECIES 17 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r.a ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000155004 ENSGT00940000159027 ENSGT00390000015579.a.a.a ENSGT00940000160755 ENSGT00940000157864 Three-toed box turtle MODERN SPECIES 37 HMOX2 (ENSTMTG00000002906) CDIP1 (ENSTMTG00000002902) UBALD1 (ENSTMTG00000002895) MGRN1 (ENSTMTG00000002882) ENSTMTG00000002873 NUDT16L1 (ENSTMTG00000002867) NAA60 (ENSTMTG00000002857) INTS15 (ENSTMTG00000002854) DNASE1 (ENSTMTG00000002851) DNASE1L2 (ENSTMTG00000002844) ECI1 (ENSTMTG00000002841) PTX4 (ENSTMTG00000002832) #22 CLCN7 (ENSTMTG00000002818) #23 PERCC1 (ENSTMTG00000002814) LUC7L (ENSTMTG00000002807) FAM234A (ENSTMTG00000002800) RGS11 (ENSTMTG00000002775) ARHGDIG (ENSTMTG00000002735) PDIA2 (ENSTMTG00000002717) AXIN1 (ENSTMTG00000002708) MRPL28 (ENSTMTG00000002702) PGAP6 (ENSTMTG00000002698) ENSTMTG00000002694 ENSTMTG00000002687 HBZ (ENSTMTG00000002682) NPRL3 (ENSTMTG00000002674) MPG (ENSTMTG00000002666) painted turtle MODERN SPECIES 1992 PTX4 (ENSCPBG00000002509) #22 Testudinidae ANCESTRAL SPECIES 13 ENSGT00940000155364 ENSGT01020000230401.b.b ENSGT00390000014091 ENSGT00390000017673.a ENSGT00940000157696 ENSGT00940000162979 ENSGT00390000008825.a ENSGT00390000009925.a ENSGT00940000164514.a ENSGT00390000016224.j.b ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b.q ENSGT00950000182846.b.r.a ENSGT00390000005678 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00950000183213.a.a.b ENSGT00530000063694.a ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000161859 ENSGT00940000156947 ENSGT00390000017359 ENSGT00940000160060 ENSGT00990000212922 ENSGT00940000154590 ENSGT00940000165231.b ENSGT00940000158623 ENSGT00390000015916.c Goode s thornscrub tortoise MODERN SPECIES 1 TRAP1 (ENSGEVG00005006290) SLX4 (ENSGEVG00005006903) ENSGEVG00005006930 ENSGEVG00005006942 HMOX2 (ENSGEVG00005006981) CDIP1 (ENSGEVG00005007006) UBALD1 (ENSGEVG00005007022) MGRN1 (ENSGEVG00005007044) ENSGEVG00005007087 NUDT16L1 (ENSGEVG00005007111) NAA60 (ENSGEVG00005007137) INTS15 (ENSGEVG00005007165) DNASE1 (ENSGEVG00005007183) DNASE1L2 (ENSGEVG00005007217) ECI1 (ENSGEVG00005007248) PTX4 (ENSGEVG00005007266) #22 CLCN7 (ENSGEVG00005007308) #23 PERCC1 (ENSGEVG00005007388) LUC7L (ENSGEVG00005007405) FAM234A (ENSGEVG00005007429) RGS11 (ENSGEVG00005007468) ARHGDIG (ENSGEVG00005007585) PDIA2 (ENSGEVG00005007638) AXIN1 (ENSGEVG00005007757) MRPL28 (ENSGEVG00005007777) PGAP6 (ENSGEVG00005007817) ENSGEVG00005007900 ENSGEVG00005007992 HBZ (ENSGEVG00005008020) NPRL3 (ENSGEVG00005008047) MPG (ENSGEVG00005008082) Abingdon island giant tortoise MODERN SPECIES 810 SLX4 (ENSCABG00000016942) ENSCABG00000016938 HMOX2 (ENSCABG00000016934) CDIP1 (ENSCABG00000016932) ENSCABG00000016928 UBALD1 (ENSCABG00000016923) MGRN1 (ENSCABG00000016914) ENSCABG00000016908 NUDT16L1 (ENSCABG00000016906) NAA60 (ENSCABG00000016904) INTS15 (ENSCABG00000016903) DNASE1 (ENSCABG00000016901) ENSCABG00000016898 ENSCABG00000016893 ECI1 (ENSCABG00000016882) PTX4 (ENSCABG00000016880) #22 CLCN7 (ENSCABG00000016631) #23 ENSCABG00000016623 ENSCABG00000016620 FAM234A (ENSCABG00000016617) RGS11 (ENSCABG00000016611) ARHGDIG (ENSCABG00000016569) PDIA2 (ENSCABG00000016548) AXIN1 (ENSCABG00000016542) MRPL28 (ENSCABG00000016539) PGAP6 (ENSCABG00000016533) ENSCABG00000016530 ENSCABG00000016527 ENSCABG00000016524 HBZ (ENSCABG00000016522) ENSCABG00000016484 Chinese turtle MODERN SPECIES 1646 TRAP1 (ENSPSIG00000006020) SLX4 (ENSPSIG00000006006) ENSPSIG00000006001 ENSPSIG00000005840 HMOX2 (ENSPSIG00000005571) CDIP1 (ENSPSIG00000005565) ENSPSIG00000017986 UBALD1 (ENSPSIG00000017931) MGRN1 (ENSPSIG00000017579) ENSPSIG00000017578 NUDT16L1 (ENSPSIG00000017573) NAA60 (ENSPSIG00000017315) INTS15 (ENSPSIG00000017057) DNASE1L2 (ENSPSIG00000016213) ECI1 (ENSPSIG00000015551) PTX4 (ENSPSIG00000015547) #22 CLCN7 (ENSPSIG00000013909) #23 Lepidosauria ANCESTRAL SPECIES 259 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 Episquamata ANCESTRAL SPECIES 8 ENSGT00390000004428.b ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00390000000111.b.b ENSGT00940000155421.b.e.a ENSGT00390000007773 ENSGT00940000160271 ENSGT00940000155366.a ENSGT00390000009447 ENSGT00390000016020 ENSGT00390000018542.b ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000016224.j.b ENSGT00940000164514.a ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000160872 ENSGT00940000155280 ENSGT00940000156606 Toxicofera ANCESTRAL SPECIES 14 ENSGT00390000004428.b ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00390000000111.b.b ENSGT00940000155421.b.e.a ENSGT00390000007773 ENSGT00940000160271 ENSGT00940000155366.a ENSGT00390000009447 ENSGT00390000016020 ENSGT00390000018542.b ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00940000164514.a ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000155280 ENSGT00940000159318 ENSGT00940000156606 ENSGT00390000012037 Elapidae ANCESTRAL SPECIES 43 ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000155280 ENSGT00940000159328 ENSGT00940000159318 ENSGT00940000156606 ENSGT00390000012037 Elapidae_a ANCESTRAL SPECIES 90 ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000155280 ENSGT00940000156606 ENSGT00940000159318 ENSGT00390000012037 ENSGT00940000158383 Acanthophiinae ANCESTRAL SPECIES 85 ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000155280 ENSGT00940000159328 ENSGT00940000159318 ENSGT00940000156606 ENSGT00390000012037 Mainland tiger snake MODERN SPECIES 193 DEXI (ENSNSUG00000000181) CLEC16A (ENSNSUG00000000193) SOCS1 (ENSNSUG00000000214) NDE1 (ENSNSUG00000000223) ENSNSUG00000000304 ENSNSUG00000000321 CEP20 (ENSNSUG00000000326) ABCC1 (ENSNSUG00000000340) LITAF (ENSNSUG00000000497) SNN (ENSNSUG00000000499) ENSNSUG00000000501 ENSNSUG00000001025 ENSNSUG00000002283 ENSNSUG00000002296 BFAR (ENSNSUG00000002301) PTX4 (ENSNSUG00000002303) #22 CLCN7 (ENSNSUG00000002313) #23 PARN (ENSNSUG00000003690) ECI1 (ENSNSUG00000003737) DNASE1L2 (ENSNSUG00000003738) DNASE1 (ENSNSUG00000003741) INTS15 (ENSNSUG00000003743) ENSNSUG00000003764 ENSNSUG00000003765 MGRN1 (ENSNSUG00000003768) CDIP1 (ENSNSUG00000003775) HMOX2 (ENSNSUG00000003784) DNAJA3 (ENSNSUG00000003786) ENSNSUG00000003797 VASN (ENSNSUG00000003799) CORO7 (ENSNSUG00000003801) Eastern brown snake MODERN SPECIES 24 NUBP1 (ENSPTXG00000003104) ##11 TVP23A (ENSPTXG00000003108) ENSPTXG00000003112 CLEC16A (ENSPTXG00000003119) ENSPTXG00000003144 ENSPTXG00000003147 ABCC1 (ENSPTXG00000003208) LITAF (ENSPTXG00000012800) SNN (ENSPTXG00000012801) TXNDC11 (ENSPTXG00000012803) ENSPTXG00000012804 ENSPTXG00000012805 ENSPTXG00000012939 ENSPTXG00000012941 BFAR (ENSPTXG00000012942) PTX4 (ENSPTXG00000012945) #22 CLCN7 (ENSPTXG00000012948) #23 PARN (ENSPTXG00000012950) ECI1 (ENSPTXG00000012951) ENSPTXG00000012952 DNASE1 (ENSPTXG00000012953) INTS15 (ENSPTXG00000012954) NAA60 (ENSPTXG00000012956) MGRN1 (ENSPTXG00000012957) CDIP1 (ENSPTXG00000012958) HMOX2 (ENSPTXG00000012959) DNAJA3 (ENSPTXG00000012960) CORO7 (ENSPTXG00000012961) VASN (ENSPTXG00000012962) PAM16 (ENSPTXG00000012963) GLIS2 (ENSPTXG00000012964) Blue-lipped sea krait MODERN SPECIES 2157 MYH11 (ENSLLTG00000003547) ENSLLTG00000010113 ABCC1 (ENSLLTG00000010074) LITAF (ENSLLTG00000010049) SNN (ENSLLTG00000010039) ENSLLTG00000010030 TXNDC11 (ENSLLTG00000010014) ZC3H7A (ENSLLTG00000009953) ENSLLTG00000009936 ENSLLTG00000009908 BFAR (ENSLLTG00000009894) PTX4 (ENSLLTG00000009887) #22 CLCN7 (ENSLLTG00000009848) #23 PARN (ENSLLTG00000009818) ECI1 (ENSLLTG00000009808) DNASE1L2 (ENSLLTG00000009775) INTS15 (ENSLLTG00000009748) NAA60 (ENSLLTG00000009722) MGRN1 (ENSLLTG00000009666) CDIP1 (ENSLLTG00000009642) HMOX2 (ENSLLTG00000009625) DNAJA3 (ENSLLTG00000009594) Lizard MODERN SPECIES 1296 ENSACAG00000005509 ENSACAG00000005331 ENSACAG00000005265 ENSACAG00000005239 ENSACAG00000027048 #22 ENSACAG00000005029 #23 ENSACAG00000004973 ECI1 (ENSACAG00000040492) ENSACAG00000000546 ENSACAG00000004892 ENSACAG00000004874 ENSACAG00000040599 ENSACAG00000004772 Laterata ANCESTRAL SPECIES 22 ENSGT00390000004428.b ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00390000000111.b.b ENSGT00940000155421.b.e.a ENSGT00390000007773 ENSGT00940000160271 ENSGT00940000155366.a ENSGT00390000009447 ENSGT00390000016020 ENSGT00390000018542.b ENSGT00940000157803.a ENSGT00390000005386 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000153167.A.b ENSGT00390000005678 ENSGT00950000182846.b.r ENSGT00950000182846.b.q ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000016224.j.b ENSGT00940000164514.a ENSGT00390000009925.a ENSGT00940000157696 ENSGT00390000017673.a ENSGT00940000160872 ENSGT00940000155280 ENSGT00940000156606 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 5 CIITA (ENSPMRG00000013012) DEXI (ENSPMRG00000012999) CLEC16A (ENSPMRG00000012985) SOCS1 (ENSPMRG00000012979) NDE1 (ENSPMRG00000012971) MYH11 (ENSPMRG00000012884) CEP20 (ENSPMRG00000012867) ABCC1 (ENSPMRG00000012816) LITAF (ENSPMRG00000012805) SNN (ENSPMRG00000012802) TXNDC11 (ENSPMRG00000012797) ZC3H7A (ENSPMRG00000012786) ENSPMRG00000012779 ENSPMRG00000012777 BFAR (ENSPMRG00000023027) ENSPMRG00000023022 #22 CLCN7 (ENSPMRG00000023016) #23 ENSPMRG00000023011 PARN (ENSPMRG00000023002) ENSPMRG00000022996 ECI1 (ENSPMRG00000022991) ENSPMRG00000022975 ENSPMRG00000022958 ENSPMRG00000022939 ENSPMRG00000022932 ARPC1B (ENSPMRG00000022924) PDAP1 (ENSPMRG00000022918) BUD31 (ENSPMRG00000022912) PTCD1 (ENSPMRG00000022910) CPSF4 (ENSPMRG00000022904) ENSPMRG00000022899 Common wall lizard MODERN SPECIES 262 ENSPMRG00000022178 #22 Argentine black and white tegu MODERN SPECIES 132 NDE1 (ENSSMRG00000001797) ENSSMRG00000001800 ENSSMRG00000001859 CEP20 (ENSSMRG00000001866) ABCC1 (ENSSMRG00000001876) LITAF (ENSSMRG00000001914) SNN (ENSSMRG00000001919) TXNDC11 (ENSSMRG00000001923) ENSSMRG00000001932 ZC3H7A (ENSSMRG00000001935) ENSSMRG00000001967 ENSSMRG00000001969 BFAR (ENSSMRG00000001970) PTX4 (ENSSMRG00000001972) #22 CLCN7 (ENSSMRG00000001977) #23 PARN (ENSSMRG00000002079) ECI1 (ENSSMRG00000003660) DNASE1L2 (ENSSMRG00000003723) DNASE1 (ENSSMRG00000003729) ENSSMRG00000003733 INTS15 (ENSSMRG00000003735) NAA60 (ENSSMRG00000003755) NUDT16L1 (ENSSMRG00000003756) ENSSMRG00000003764 MGRN1 (ENSSMRG00000003772) ENSSMRG00000003818 ENSSMRG00000003822 HMOX2 (ENSSMRG00000003827) NMRAL1 (ENSSMRG00000003876) Anura ANCESTRAL SPECIES 172 ENSGT00530000064671 ENSGT00940000160651 ENSGT00940000158109 ENSGT00940000160173 ENSGT00390000013319 ENSGT00940000153820.b.b ENSGT00950000182933.B.a ENSGT00940000158310 ENSGT00940000171636 ENSGT00390000007164 ENSGT00940000156435 ENSGT00940000158857 ENSGT00940000153578.B ENSGT00940000164817 ENSGT00940000160832 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 Frog MODERN SPECIES 9 t2r52 (ENSXETG00000030742) cfap70 (ENSXETG00000024528) mss51 (ENSXETG00000009165) ENSXETG00000046559 ENSXETG00000046484 septin12 (ENSXETG00000009151) ENSXETG00000038167 XB5962511 [provisional:galr2] (ENSXETG00000009147) ENSXETG00000039114 rogdi (ENSXETG00000009143) glyr1 (ENSXETG00000009139) ubn1 (ENSXETG00000009138) ppl (ENSXETG00000009137) ENSXETG00000034088 sec14l1 (ENSXETG00000009129) ptx4 (ENSXETG00000034815) #22 clcn7 (ENSXETG00000009124) #23 XB940087 [provisional] (ENSXETG00000047329) wdr90 (ENSXETG00000003627) rhot2 (ENSXETG00000003628) RHBDL1 (ENSXETG00000046324) linc02867 (ENSXETG00000033286) stub1 (ENSXETG00000032697) tuba8 (ENSXETG00000012120) XB5729975 (ENSXETG00000012121) XB5729975 [provisional] (ENSXETG00000041450) pgap6 (ENSXETG00000012131) ENSXETG00000040928 rgs9 (ENSXETG00000034304) ENSXETG00000042818 arhgdig (ENSXETG00000012139) Leishan spiny toad MODERN SPECIES 10 MSS51 (ENSLLEG00000027375) ENSLLEG00000027320 ENSLLEG00000027259 ENSLLEG00000027217 ENSLLEG00000027180 ENSLLEG00000027167 ENSLLEG00000027131 ROGDI (ENSLLEG00000027076) GLYR1 (ENSLLEG00000026130) UBN1 (ENSLLEG00000025751) PPL (ENSLLEG00000025498) ENSLLEG00000025460 ENSLLEG00000025305 SEC14L5 (ENSLLEG00000025176) ENSLLEG00000025141 PTX4 (ENSLLEG00000025074) #22 CLCN7 (ENSLLEG00000024792) #23 PERCC1 (ENSLLEG00000024761) ENSLLEG00000024733 PGAP6 (ENSLLEG00000024562) ENSLLEG00000024515 RGS11 (ENSLLEG00000023987) ENSLLEG00000023438 AXIN1 (ENSLLEG00000023214) ENSLLEG00000022618 MPRIP (ENSLLEG00000021300) PLD6 (ENSLLEG00000021204) ENSLLEG00000021182 FLCN (ENSLLEG00000021041) COPS3 (ENSLLEG00000019687) NT5M (ENSLLEG00000019503) Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 11 ENSGT00940000163942 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000174128.B ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000156687.f.a ENSGT00940000156687.f.b ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00960000186761 ENSGT00940000157023 ENSGT00940000158681 ENSGT00940000164162 ENSGT00940000163043 ENSGT01080000257869 Elephant shark MODERN SPECIES 1486 ENSCMIG00000001393 ENSCMIG00000001178 ENSCMIG00000001004 PLCH1 (ENSCMIG00000000888) C3orf33 (ENSCMIG00000000870) slc33a1 (ENSCMIG00000000865) gmps (ENSCMIG00000000610) ENSCMIG00000000536 ENSCMIG00000000520 kcnab1a (ENSCMIG00000000504) ssr3 (ENSCMIG00000000446) TIPARP (ENSCMIG00000000432) LEKR1 (ENSCMIG00000000416) ccnl1a (ENSCMIG00000000360) ENSCMIG00000000199 PTX3 (ENSCMIG00000000188) ##22 veph1 (ENSCMIG00000000184) ENSCMIG00000018939 ENSCMIG00000018936 ENSCMIG00000018935 ENSCMIG00000018928 serpini1 (ENSCMIG00000018919) pdcd10b (ENSCMIG00000018918) ENSCMIG00000018916 ENSCMIG00000018914 SERPINI2 (ENSCMIG00000018911) ENSCMIG00000018909 ENSCMIG00000018906 BCHE (ENSCMIG00000018903) SLITRK3 (ENSCMIG00000018901) ENSCMIG00000018706 Euteleostomi ANCESTRAL SPECIES 7 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT00940000174128.B ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000164637 ENSGT00550000076432 ENSGT00390000010165 ENSGT00400000023987 ENSGT00730000111059 ENSGT00940000160734 ENSGT00940000163776.b ENSGT00390000015823 ENSGT00940000156687.f.a ENSGT00390000015980 ENSGT00940000156687.f.b ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000167407 Sarcopterygii ANCESTRAL SPECIES 5 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 988 ENSLACG00000001621 ##22 ENSLACG00000001954 ENSLACG00000003983 SHOX2 (ENSLACG00000008464) RSRC1 (ENSLACG00000008594) MLF1 (ENSLACG00000011870) GFM1 (ENSLACG00000012295) LXN (ENSLACG00000012472) RARRES1 (ENSLACG00000012626) MFSD1 (ENSLACG00000012993) ENSLACG00000013345 IQCJ (ENSLACG00000013503) Coelacanth MODERN SPECIES 642 RNF167 (ENSLACG00000001927) SLC25A11 (ENSLACG00000003297) TM4SF5 (ENSLACG00000004214) dnajc3b (ENSLACG00000004843) ENSLACG00000005131 ENSLACG00000005328 PLD2 (ENSLACG00000006510) PAQR9 (ENSLACG00000007014) ZMYND15 (ENSLACG00000007167) tmem88b (ENSLACG00000007410) ENSLACG00000007636 ##22 NAA38 (ENSLACG00000007757) CYB5D1 (ENSLACG00000007826) CHD3 (ENSLACG00000008031) ENSLACG00000008813 KCNAB3 (ENSLACG00000009253) TRAPPC1 (ENSLACG00000009874) GUCY2D (ENSLACG00000010494) ENSLACG00000010774 ##12 ENSLACG00000011107 ENSLACG00000011205 grk1b (ENSLACG00000011283) ENSLACG00000011485 POLR2A (ENSLACG00000012071) ENSLACG00000012419 ENSLACG00000012482 Tetrapoda ANCESTRAL SPECIES 12 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 Amniota ANCESTRAL SPECIES 13 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Sauria ANCESTRAL SPECIES 9 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Archelosauria ANCESTRAL SPECIES 11 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Archosauria ANCESTRAL SPECIES 10 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 Aves ANCESTRAL SPECIES 13 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 Neognathae ANCESTRAL SPECIES 9 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 Galloanserae ANCESTRAL SPECIES 16 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Anatidae ANCESTRAL SPECIES 31 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Duck MODERN SPECIES 27 P2RY1 (ENSAPLG00000001615) RAP2B (ENSAPLG00000022231) ARHGEF26 (ENSAPLG00000012467) DHX36 (ENSAPLG00000012597) GPR149 (ENSAPLG00000013026) MME (ENSAPLG00000013114) PLCH1 (ENSAPLG00000014302) C3orf33 (ENSAPLG00000015160) SLC33A1 (ENSAPLG00000018174) GMPS (ENSAPLG00000011347) KCNAB1 (ENSAPLG00000011083) SSR3 (ENSAPLG00000010825) TIPARP (ENSAPLG00000010788) LEKR1 (ENSAPLG00000010703) CCNL1 (ENSAPLG00000010427) PTX3 (ENSAPLG00000004626) ##22 VEPH1 (ENSAPLG00000004613) ENSAPLG00000004823 SHOX2 (ENSAPLG00000028948) RSRC1 (ENSAPLG00000004783) MLF1 (ENSAPLG00000005007) LXN (ENSAPLG00000005337) GFM1 (ENSAPLG00000005022) RARRES1 (ENSAPLG00000005432) MFSD1 (ENSAPLG00000005507) SCHIP1 (ENSAPLG00000006069) IL12A (ENSAPLG00000006147) ENSAPLG00000006160 IFT80 (ENSAPLG00000006299) SMC4 (ENSAPLG00000006895) TRIM59 (ENSAPLG00000001715) Pink-footed goose MODERN SPECIES 97 ARHGEF26 (ENSABRG00000019762) DHX36 (ENSABRG00000019769) GPR149 (ENSABRG00000019773) MME (ENSABRG00000019778) PLCH1 (ENSABRG00000019784) C3orf33 (ENSABRG00000019787) SLC33A1 (ENSABRG00000019790) GMPS (ENSABRG00000019797) ENSABRG00000019823 KCNAB1 (ENSABRG00000000815) SSR3 (ENSABRG00000000872) TIPARP (ENSABRG00000000888) LEKR1 (ENSABRG00000000923) CCNL1 (ENSABRG00000001075) VEPH1 (ENSABRG00000001126) PTX3 (ENSABRG00000001205) ##22 ENSABRG00000001255 RSRC1 (ENSABRG00000001329) MLF1 (ENSABRG00000001346) GFM1 (ENSABRG00000001459) LXN (ENSABRG00000002995) RARRES1 (ENSABRG00000003005) MFSD1 (ENSABRG00000003028) SCHIP1 (ENSABRG00000003131) IL12A (ENSABRG00000003178) ENSABRG00000003240 IFT80 (ENSABRG00000003279) SMC4 (ENSABRG00000003484) TRIM59 (ENSABRG00000004931) KPNA4 (ENSABRG00000004942) ARL14 (ENSABRG00000004986) Phasianidae ANCESTRAL SPECIES 9 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.a ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Japanese quail MODERN SPECIES 27 RAP2B (ENSCJPG00005018144) ARHGEF26 (ENSCJPG00005018143) DHX36 (ENSCJPG00005018141) GPR149 (ENSCJPG00005018139) MME (ENSCJPG00005018136) PLCH1 (ENSCJPG00005018132) C3orf33 (ENSCJPG00005018129) SLC33A1 (ENSCJPG00005018128) GMPS (ENSCJPG00005018125) KCNAB1 (ENSCJPG00005018122) SSR3 (ENSCJPG00005018121) TIPARP (ENSCJPG00005018120) LEKR1 (ENSCJPG00005018118) CCNL1 (ENSCJPG00005018116) ENSCJPG00005018114 PTX3 (ENSCJPG00005018113) ##22 ENSCJPG00005018112 ENSCJPG00005018111 SHOX2 (ENSCJPG00005018108) RSRC1 (ENSCJPG00005018107) MLF1 (ENSCJPG00005018106) LXN (ENSCJPG00005018105) GFM1 (ENSCJPG00005018104) RARRES1 (ENSCJPG00005018102) MFSD1 (ENSCJPG00005018100) IQCJ (ENSCJPG00005018096) SCHIP1 (ENSCJPG00005018091) IL12A (ENSCJPG00005018088) ENSCJPG00005018087 IFT80 (ENSCJPG00005018084) SMC4 (ENSCJPG00005018081) Phasianidae_b ANCESTRAL SPECIES 12 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.a ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Turkey MODERN SPECIES 2 P2RY1 (ENSMGAG00000016075) RAP2B (ENSMGAG00000010860) ARHGEF26 (ENSMGAG00000010835) DHX36 (ENSMGAG00000010853) GPR149 (ENSMGAG00000010831) MME (ENSMGAG00000010779) PLCH1 (ENSMGAG00000010755) C3orf33 (ENSMGAG00000010753) SLC33A1 (ENSMGAG00000010750) GMPS (ENSMGAG00000010733) KCNAB1 (ENSMGAG00000010715) SSR3 (ENSMGAG00000010707) TIPARP (ENSMGAG00000010699) ENSMGAG00000010696 CCNL1 (ENSMGAG00000010679) PTX3 (ENSMGAG00000010676) ##22 VEPH1 (ENSMGAG00000010670) ENSMGAG00000022083 SHOX2 (ENSMGAG00000021833) RSRC1 (ENSMGAG00000010633) MLF1 (ENSMGAG00000010656) LXN (ENSMGAG00000018871) GFM1 (ENSMGAG00000010641) RARRES1 (ENSMGAG00000022097) MFSD1 (ENSMGAG00000010610) IQCJ (ENSMGAG00000010607) SCHIP1 (ENSMGAG00000010603) IL12A (ENSMGAG00000010602) ENSMGAG00000018415 IFT80 (ENSMGAG00000010578) SMC4 (ENSMGAG00000010547) Chicken MODERN SPECIES 38 RAP2B (ENSGALG00010001535) ENSGALG00010001493 ARHGEF26 (ENSGALG00010001469) DHX36 (ENSGALG00010001462) GPR149 (ENSGALG00010001450) MME (ENSGALG00010001385) PLCH1 (ENSGALG00010001333) C3orf33 (ENSGALG00010001070) SLC33A1 (ENSGALG00010001066) GMPS (ENSGALG00010001301) KCNAB1 (ENSGALG00010001520) SSR3 (ENSGALG00010001505) TIPARP (ENSGALG00010001499) LEKR1 (ENSGALG00010001497) CCNL1 (ENSGALG00010001495) PTX3 (ENSGALG00010001230) ##22 VEPH1 (ENSGALG00010001226) ENSGALG00010001218 ENSGALG00010001217 SHOX2 (ENSGALG00010001216) RSRC1 (ENSGALG00010001206) MLF1 (ENSGALG00010001192) LXN (ENSGALG00010001190) GFM1 (ENSGALG00010001187) RARRES1 (ENSGALG00010001183) MFSD1 (ENSGALG00010001181) IL12A (ENSGALG00010001176) ENSGALG00010001174 IFT80 (ENSGALG00010001173) SMC4 (ENSGALG00010001167) TRIM59 (ENSGALG00010001166) Neognathae_b ANCESTRAL SPECIES 11 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Neognathae_c ANCESTRAL SPECIES 13 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Golden eagle MODERN SPECIES 1 ARHGEF26 (ENSACCG00020000809) DHX36 (ENSACCG00020000846) GPR149 (ENSACCG00020000890) MME (ENSACCG00020000944) ENSACCG00020001003 PLCH1 (ENSACCG00020001034) C3orf33 (ENSACCG00020001078) SLC33A1 (ENSACCG00020001098) GMPS (ENSACCG00020001127) KCNAB1 (ENSACCG00020001172) SSR3 (ENSACCG00020001198) TIPARP (ENSACCG00020001217) LEKR1 (ENSACCG00020001243) CCNL1 (ENSACCG00020001281) VEPH1 (ENSACCG00020001324) PTX3 (ENSACCG00020001339) ##22 ENSACCG00020001370 SHOX2 (ENSACCG00020001394) ENSACCG00020001412 ENSACCG00020001466 GFM1 (ENSACCG00020001505) LXN (ENSACCG00020001533) RARRES1 (ENSACCG00020001547) MFSD1 (ENSACCG00020001561) ENSACCG00020001581 IQCJ (ENSACCG00020001596) SCHIP1 (ENSACCG00020001618) ENSACCG00020001643 IFT80 (ENSACCG00020001677) SMC4 (ENSACCG00020001716) TRIM59 (ENSACCG00020001752) Kakapo MODERN SPECIES 25 ARHGEF26 (ENSSHBG00005020959) DHX36 (ENSSHBG00005000678) GPR149 (ENSSHBG00005010320) MME (ENSSHBG00005010463) PLCH1 (ENSSHBG00005011414) ENSSHBG00005012368 SLC33A1 (ENSSHBG00005012393) GMPS (ENSSHBG00005012419) KCNAB1 (ENSSHBG00005012470) SSR3 (ENSSHBG00005012521) TIPARP (ENSSHBG00005012534) ENSSHBG00005012567 ENSSHBG00005012578 CCNL1 (ENSSHBG00005012596) VEPH1 (ENSSHBG00005012620) PTX3 (ENSSHBG00005012656) ##22 ENSSHBG00005012664 SHOX2 (ENSSHBG00005012685) RSRC1 (ENSSHBG00005012704) MLF1 (ENSSHBG00005012720) GFM1 (ENSSHBG00005012747) LXN (ENSSHBG00005012782) RARRES1 (ENSSHBG00005012796) MFSD1 (ENSSHBG00005012818) SCHIP1 (ENSSHBG00005012841) IL12A (ENSSHBG00005012858) ENSSHBG00005012887 IFT80 (ENSSHBG00005012978) SMC4 (ENSSHBG00005013003) TRIM59 (ENSSHBG00005013041) KPNA4 (ENSSHBG00005013053) Passeriformes ANCESTRAL SPECIES 9 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00960000189716 ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Passeriformes_d ANCESTRAL SPECIES 10 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00960000189716 ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 Passeriformes_g ANCESTRAL SPECIES 11 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000165917 ENSGT01050000244891.C.c.a ENSGT00940000162138 Passeroidea ANCESTRAL SPECIES 13 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000165917 ENSGT01050000244891.C.c.a ENSGT00940000162138 Zebra finch MODERN SPECIES 31 RAP2B (ENSTGUG00000018897) ARHGEF26 (ENSTGUG00000011330) DHX36 (ENSTGUG00000011317) GPR149 (ENSTGUG00000011327) ENSTGUG00000028744 MME (ENSTGUG00000011304) PLCH1 (ENSTGUG00000011275) C3orf33 (ENSTGUG00000019088) SLC33A1 (ENSTGUG00000011271) GMPS (ENSTGUG00000011256) KCNAB1 (ENSTGUG00000011253) SSR3 (ENSTGUG00000011245) TIPARP (ENSTGUG00000017448) LEKR1 (ENSTGUG00000011239) CCNL1 (ENSTGUG00000011231) PTX3 (ENSTGUG00000011229) ##22 VEPH1 (ENSTGUG00000011225) SHOX2 (ENSTGUG00000011221) ENSTGUG00000028427 ENSTGUG00000021027 RSRC1 (ENSTGUG00000011212) MLF1 (ENSTGUG00000011211) GFM1 (ENSTGUG00000028908) RARRES1 (ENSTGUG00000011202) MFSD1 (ENSTGUG00000011199) SCHIP1 (ENSTGUG00000011194) ENSTGUG00000024135 ENSTGUG00000011184 SMC4 (ENSTGUG00000011171) ENSTGUG00000011169 KPNA4 (ENSTGUG00000011158) Common canary MODERN SPECIES 10 MBNL1 (ENSSCAG00000008785) P2RY1 (ENSSCAG00000008798) ARHGEF26 (ENSSCAG00000008816) DHX36 (ENSSCAG00000008892) MME (ENSSCAG00000008911) PLCH1 (ENSSCAG00000008936) C3orf33 (ENSSCAG00000008985) SLC33A1 (ENSSCAG00000009014) GMPS (ENSSCAG00000009120) KCNAB1 (ENSSCAG00000009142) SSR3 (ENSSCAG00000009147) TIPARP (ENSSCAG00000009150) LEKR1 (ENSSCAG00000009161) CCNL1 (ENSSCAG00000009169) VEPH1 (ENSSCAG00000009174) PTX3 (ENSSCAG00000009186) ##22 ENSSCAG00000009194 ENSSCAG00000009201 ENSSCAG00000009210 GFM1 (ENSSCAG00000009269) LXN (ENSSCAG00000009605) RARRES1 (ENSSCAG00000009619) MFSD1 (ENSSCAG00000009628) IQCJ (ENSSCAG00000009635) SCHIP1 (ENSSCAG00000009640) ENSSCAG00000009644 IFT80 (ENSSCAG00000009649) SMC4 (ENSSCAG00000009655) KPNA4 (ENSSCAG00000009661) ARL14 (ENSSCAG00000009672) B3GALNT1 (ENSSCAG00000009681) Medium ground finch MODERN SPECIES 12 ENSGFOG00000000274 RAP2B (ENSGFOG00000000269) ARHGEF26 (ENSGFOG00000000262) DHX36 (ENSGFOG00000000241) GPR149 (ENSGFOG00000000220) MME (ENSGFOG00000000194) PLCH1 (ENSGFOG00000000177) C3orf33 (ENSGFOG00000013072) SLC33A1 (ENSGFOG00000013063) GMPS (ENSGFOG00000013032) KCNAB1 (ENSGFOG00000013021) SSR3 (ENSGFOG00000013018) TIPARP (ENSGFOG00000013011) LEKR1 (ENSGFOG00000013001) CCNL1 (ENSGFOG00000012965) PTX3 (ENSGFOG00000012963) ##22 VEPH1 (ENSGFOG00000012933) ENSGFOG00000012925 MLF1 (ENSGFOG00000012919) GFM1 (ENSGFOG00000012913) ENSGFOG00000012911 RARRES1 (ENSGFOG00000012908) MFSD1 (ENSGFOG00000012904) SCHIP1 (ENSGFOG00000012901) ENSGFOG00000012894 IFT80 (ENSGFOG00000012884) SMC4 (ENSGFOG00000012874) KPNA4 (ENSGFOG00000012863) ARL14 (ENSGFOG00000012860) B3GALNT1 (ENSGFOG00000012854) PPM1L (ENSGFOG00000012851) Flycatcher MODERN SPECIES 28 RAP2B (ENSFALG00000014478) ARHGEF26 (ENSFALG00000005061) DHX36 (ENSFALG00000005045) GPR149 (ENSFALG00000005032) MME (ENSFALG00000004943) PLCH1 (ENSFALG00000004898) C3orf33 (ENSFALG00000028770) SLC33A1 (ENSFALG00000004880) GMPS (ENSFALG00000004855) KCNAB1 (ENSFALG00000004804) SSR3 (ENSFALG00000004786) TIPARP (ENSFALG00000004781) ENSFALG00000027016 LEKR1 (ENSFALG00000004778) CCNL1 (ENSFALG00000004760) PTX3 (ENSFALG00000024281) ##22 VEPH1 (ENSFALG00000004742) ENSFALG00000024357 ENSFALG00000026953 ENSFALG00000025231 SHOX2 (ENSFALG00000004733) ENSFALG00000025108 ENSFALG00000026779 MLF1 (ENSFALG00000027970) LXN (ENSFALG00000007627) ENSFALG00000024359 GFM1 (ENSFALG00000007619) RARRES1 (ENSFALG00000007637) MFSD1 (ENSFALG00000007649) ENSFALG00000025480 SCHIP1 (ENSFALG00000027148) Great tit MODERN SPECIES 29 RAP2B (ENSPMJG00000006998) ARHGEF26 (ENSPMJG00000006839) DHX36 (ENSPMJG00000006774) GPR149 (ENSPMJG00000006770) MME (ENSPMJG00000006763) PLCH1 (ENSPMJG00000006754) C3orf33 (ENSPMJG00000006750) SLC33A1 (ENSPMJG00000006748) GMPS (ENSPMJG00000006742) ENSPMJG00000006735 KCNAB1 (ENSPMJG00000006726) SSR3 (ENSPMJG00000006717) TIPARP (ENSPMJG00000006715) LEKR1 (ENSPMJG00000006710) CCNL1 (ENSPMJG00000006580) PTX3 (ENSPMJG00000006575) ##22 VEPH1 (ENSPMJG00000006562) SHOX2 (ENSPMJG00000006476) ENSPMJG00000006475 ENSPMJG00000006474 MLF1 (ENSPMJG00000006472) GFM1 (ENSPMJG00000005877) RARRES1 (ENSPMJG00000005861) MFSD1 (ENSPMJG00000005854) SCHIP1 (ENSPMJG00000005846) ENSPMJG00000005842 IFT80 (ENSPMJG00000005826) SMC4 (ENSPMJG00000005816) KPNA4 (ENSPMJG00000005799) ARL14 (ENSPMJG00000005798) B3GALNT1 (ENSPMJG00000005796) African ostrich MODERN SPECIES 390 MME (ENSSCUG00000002517) PLCH1 (ENSSCUG00000002520) C3orf33 (ENSSCUG00000002525) SLC33A1 (ENSSCUG00000002533) GMPS (ENSSCUG00000002543) SSR3 (ENSSCUG00000002556) TIPARP (ENSSCUG00000002559) ENSSCUG00000002561 LEKR1 (ENSSCUG00000002565) CCNL1 (ENSSCUG00000002573) VEPH1 (ENSSCUG00000002582) PTX3 (ENSSCUG00000002584) ##22 ENSSCUG00000002586 ENSSCUG00000002589 MLF1 (ENSSCUG00000002592) GFM1 (ENSSCUG00000002605) LXN (ENSSCUG00000002613) RARRES1 (ENSSCUG00000002614) MFSD1 (ENSSCUG00000002617) ENSSCUG00000002623 IQCJ (ENSSCUG00000002626) SCHIP1 (ENSSCUG00000002628) ENSSCUG00000002635 IFT80 (ENSSCUG00000002640) SMC4 (ENSSCUG00000002651) TRIM59 (ENSSCUG00000002657) KPNA4 (ENSSCUG00000002661) Australian saltwater crocodile MODERN SPECIES 30 ARHGEF26 (ENSCPRG00005007023) DHX36 (ENSCPRG00005007029) GPR149 (ENSCPRG00005007044) MME (ENSCPRG00005007060) PLCH1 (ENSCPRG00005007105) C3orf33 (ENSCPRG00005007249) SLC33A1 (ENSCPRG00005007251) GMPS (ENSCPRG00005007269) KCNAB1 (ENSCPRG00005007460) SSR3 (ENSCPRG00005007494) TIPARP (ENSCPRG00005007501) ENSCPRG00005007521 LEKR1 (ENSCPRG00005007525) CCNL1 (ENSCPRG00005007539) VEPH1 (ENSCPRG00005007546) PTX3 (ENSCPRG00005007560) ##22 ENSCPRG00005007569 SHOX2 (ENSCPRG00005007578) RSRC1 (ENSCPRG00005007591) MLF1 (ENSCPRG00005007594) GFM1 (ENSCPRG00005007644) LXN (ENSCPRG00005008070) RARRES1 (ENSCPRG00005008125) MFSD1 (ENSCPRG00005008138) ENSCPRG00005008146 IFT80 (ENSCPRG00005008173) SMC4 (ENSCPRG00005008221) TRIM59 (ENSCPRG00005008255) KPNA4 (ENSCPRG00005008257) SPTSSB (ENSCPRG00005008271) ENSCPRG00005008276 Cryptodira ANCESTRAL SPECIES 16 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Testudinoidea ANCESTRAL SPECIES 9 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Emydidae ANCESTRAL SPECIES 3 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Three-toed box turtle MODERN SPECIES 32 DHX36 (ENSTMTG00000002945) GPR149 (ENSTMTG00000002963) MME (ENSTMTG00000002970) ENSTMTG00000002984 PLCH1 (ENSTMTG00000003000) C3orf33 (ENSTMTG00000003126) SLC33A1 (ENSTMTG00000003141) GMPS (ENSTMTG00000003156) ENSTMTG00000003217 KCNAB1 (ENSTMTG00000003735) SSR3 (ENSTMTG00000003756) TIPARP (ENSTMTG00000003776) ENSTMTG00000003797 LEKR1 (ENSTMTG00000003806) CCNL1 (ENSTMTG00000003843) PTX3 (ENSTMTG00000003870) ##22 ENSTMTG00000003885 ENSTMTG00000003903 SHOX2 (ENSTMTG00000003924) MLF1 (ENSTMTG00000003966) GFM1 (ENSTMTG00000003990) LXN (ENSTMTG00000004020) RARRES1 (ENSTMTG00000004037) MFSD1 (ENSTMTG00000004077) ENSTMTG00000004407 IQCJ (ENSTMTG00000004429) SCHIP1 (ENSTMTG00000004452) ENSTMTG00000004469 C3orf80 (ENSTMTG00000004495) IFT80 (ENSTMTG00000004514) SMC4 (ENSTMTG00000004834) painted turtle MODERN SPECIES 2423 ADAM20 (ENSCPBG00000018787) DHX36 (ENSCPBG00000018783) GPR149 (ENSCPBG00000018780) MME (ENSCPBG00000018771) PLCH1 (ENSCPBG00000018581) C3orf33 (ENSCPBG00000018534) SLC33A1 (ENSCPBG00000018529) GMPS (ENSCPBG00000018525) ENSCPBG00000018447 ENSCPBG00000018435 KCNAB1 (ENSCPBG00000018428) SSR3 (ENSCPBG00000018423) TIPARP (ENSCPBG00000018420) LEKR1 (ENSCPBG00000018407) CCNL1 (ENSCPBG00000018400) PTX3 (ENSCPBG00000018395) ##22 VEPH1 (ENSCPBG00000018387) ENSCPBG00000018381 SHOX2 (ENSCPBG00000018375) ENSCPBG00000018373 MLF1 (ENSCPBG00000018371) LXN (ENSCPBG00000018369) GFM1 (ENSCPBG00000018367) RARRES1 (ENSCPBG00000018365) MFSD1 (ENSCPBG00000018364) ENSCPBG00000018363 IQCJ (ENSCPBG00000018360) SCHIP1 (ENSCPBG00000018357) IL12A (ENSCPBG00000018354) ENSCPBG00000018352 ENSCPBG00000018350 Testudinidae ANCESTRAL SPECIES 7 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 Abingdon island giant tortoise MODERN SPECIES 2326 SSR3 (ENSCABG00000003116) TIPARP (ENSCABG00000003114) ENSCABG00000003112 LEKR1 (ENSCABG00000003106) CCNL1 (ENSCABG00000003101) PTX3 (ENSCABG00000003097) ##22 ENSCABG00000003094 ENSCABG00000003070 SHOX2 (ENSCABG00000003057) MLF1 (ENSCABG00000003050) LXN (ENSCABG00000003048) GFM1 (ENSCABG00000003037) RARRES1 (ENSCABG00000003033) MFSD1 (ENSCABG00000003029) ENSCABG00000003027 Goode s thornscrub tortoise MODERN SPECIES 23 DHX36 (ENSGEVG00005008060) GPR149 (ENSGEVG00005008015) MME (ENSGEVG00005007888) ENSGEVG00005007858 PLCH1 (ENSGEVG00005007682) C3orf33 (ENSGEVG00005007608) SLC33A1 (ENSGEVG00005007570) GMPS (ENSGEVG00005007539) ENSGEVG00005007450 KCNAB1 (ENSGEVG00005007345) SSR3 (ENSGEVG00005007317) TIPARP (ENSGEVG00005007304) ENSGEVG00005007292 LEKR1 (ENSGEVG00005007259) CCNL1 (ENSGEVG00005007228) PTX3 (ENSGEVG00005007195) ##22 ENSGEVG00005007163 ENSGEVG00005007142 SHOX2 (ENSGEVG00005007084) ENSGEVG00005007057 MLF1 (ENSGEVG00005007034) LXN (ENSGEVG00005007005) GFM1 (ENSGEVG00005006041) RARRES1 (ENSGEVG00005005686) MFSD1 (ENSGEVG00005005642) ENSGEVG00005005621 SCHIP1 (ENSGEVG00005005599) C3orf80 (ENSGEVG00005005582) IFT80 (ENSGEVG00005005518) SMC4 (ENSGEVG00005005315) TRIM59 (ENSGEVG00005005294) Chinese turtle MODERN SPECIES 1130 ENSPSIG00000000971 MME (ENSPSIG00000010434) PLCH1 (ENSPSIG00000008812) C3orf33 (ENSPSIG00000008805) SLC33A1 (ENSPSIG00000008579) GMPS (ENSPSIG00000007196) ENSPSIG00000007102 KCNAB1 (ENSPSIG00000005640) SSR3 (ENSPSIG00000005346) TIPARP (ENSPSIG00000005160) ENSPSIG00000005143 ENSPSIG00000005121 LEKR1 (ENSPSIG00000005103) CCNL1 (ENSPSIG00000004759) ENSPSIG00000004707 PTX3 (ENSPSIG00000004651) ##22 VEPH1 (ENSPSIG00000004402) ENSPSIG00000004391 SHOX2 (ENSPSIG00000004319) RSRC1 (ENSPSIG00000004221) MLF1 (ENSPSIG00000014172) ENSPSIG00000000965 LXN (ENSPSIG00000014166) GFM1 (ENSPSIG00000012567) RARRES1 (ENSPSIG00000012393) MFSD1 (ENSPSIG00000011507) ENSPSIG00000000959 IQCJ (ENSPSIG00000011445) SCHIP1 (ENSPSIG00000010688) ENSPSIG00000010637 IFT80 (ENSPSIG00000009951) Lepidosauria ANCESTRAL SPECIES 12 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000156745 ENSGT00950000183207.b.c.b ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000156745 ENSGT00950000183207.b.c.b ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Elapidae ANCESTRAL SPECIES 4 ENSGT00950000183207.b.c.b.c.b ENSGT00950000183207.b.c.b.d ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183207.b.c.b.c.b ENSGT00950000183207.b.c.b.d ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00950000183207.b.c.b.c.b ENSGT00950000183207.b.c.b.d ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Mainland tiger snake MODERN SPECIES ENSNSUG00000018570 ENSNSUG00000018572 ENSNSUG00000018573 PLCH1 (ENSNSUG00000018574) C3orf33 (ENSNSUG00000018576) ENSNSUG00000018578 SLC33A1 (ENSNSUG00000018579) GMPS (ENSNSUG00000018581) ENSNSUG00000018586 KCNAB1 (ENSNSUG00000018814) SSR3 (ENSNSUG00000018817) TIPARP (ENSNSUG00000018818) ENSNSUG00000018819 ENSNSUG00000018820 CCNL1 (ENSNSUG00000018821) PTX3 (ENSNSUG00000018823) ##22 ENSNSUG00000018824 ENSNSUG00000018825 SHOX2 (ENSNSUG00000018826) MLF1 (ENSNSUG00000018827) GFM1 (ENSNSUG00000018828) LXN (ENSNSUG00000018958) RARRES1 (ENSNSUG00000018959) MFSD1 (ENSNSUG00000000024) IQCJ (ENSNSUG00000000772) ENSNSUG00000000781 SCHIP1 (ENSNSUG00000000788) C3orf80 (ENSNSUG00000000791) IFT80 (ENSNSUG00000000805) SMC4 (ENSNSUG00000001042) TRIM59 (ENSNSUG00000001049) Eastern brown snake MODERN SPECIES 29 ENSPTXG00000013569 ENSPTXG00000013568 PLCH1 (ENSPTXG00000013567) C3orf33 (ENSPTXG00000013565) SLC33A1 (ENSPTXG00000013564) GMPS (ENSPTXG00000013562) ENSPTXG00000013560 KCNAB1 (ENSPTXG00000013558) SSR3 (ENSPTXG00000013556) TIPARP (ENSPTXG00000013554) ENSPTXG00000013553 ENSPTXG00000013552 CCNL1 (ENSPTXG00000013550) PTX3 (ENSPTXG00000013549) ##22 ENSPTXG00000013548 ENSPTXG00000013547 SHOX2 (ENSPTXG00000013546) RSRC1 (ENSPTXG00000013543) ENSPTXG00000013541 MLF1 (ENSPTXG00000013537) LXN (ENSPTXG00000013535) GFM1 (ENSPTXG00000013531) ENSPTXG00000013529 ENSPTXG00000013526 MFSD1 (ENSPTXG00000013515) IQCJ (ENSPTXG00000013512) SCHIP1 (ENSPTXG00000013510) ENSPTXG00000013508 C3orf80 (ENSPTXG00000013507) Blue-lipped sea krait MODERN SPECIES 1762 PTX3 (ENSLLTG00000010633) ##22 Indian cobra MODERN SPECIES 3 ENSNNAG00000003480 ENSNNAG00000003501 ENSNNAG00000003510 PLCH1 (ENSNNAG00000003522) C3orf33 (ENSNNAG00000003552) SLC33A1 (ENSNNAG00000003569) GMPS (ENSNNAG00000003593) ENSNNAG00000003654 ENSNNAG00000003709 KCNAB1 (ENSNNAG00000003738) SSR3 (ENSNNAG00000003750) TIPARP (ENSNNAG00000003776) ENSNNAG00000003789 ENSNNAG00000003816 CCNL1 (ENSNNAG00000003834) PTX3 (ENSNNAG00000003894) ##22 ENSNNAG00000003910 ENSNNAG00000003943 SHOX2 (ENSNNAG00000003957) RSRC1 (ENSNNAG00000004026) MLF1 (ENSNNAG00000004056) GFM1 (ENSNNAG00000004122) ENSNNAG00000004206 MFSD1 (ENSNNAG00000004274) SCHIP1 (ENSNNAG00000004365) ENSNNAG00000004441 C3orf80 (ENSNNAG00000004538) IFT80 (ENSNNAG00000004559) SMC4 (ENSNNAG00000004718) TRIM59 (ENSNNAG00000004832) KPNA4 (ENSNNAG00000004848) Lizard MODERN SPECIES 2 C3orf33 (ENSACAG00000039040) SLC33A1 (ENSACAG00000000483) GMPS (ENSACAG00000000556) ENSACAG00000000779 ENSACAG00000036237 ENSACAG00000029010 ENSACAG00000045220 KCNAB1 (ENSACAG00000000831) ENSACAG00000028304 SSR3 (ENSACAG00000040361) TIPARP (ENSACAG00000001488) LEKR1 (ENSACAG00000023624) CCNL1 (ENSACAG00000001547) ENSACAG00000044882 ENSACAG00000039237 PTX3 (ENSACAG00000039556) ##22 ENSACAG00000045474 ENSACAG00000028952 SHOX2 (ENSACAG00000006789) ENSACAG00000036741 MLF1 (ENSACAG00000028925) LXN (ENSACAG00000006914) GFM1 (ENSACAG00000006829) ENSACAG00000026823 MFSD1 (ENSACAG00000006932) IQCJ (ENSACAG00000027417) ENSACAG00000045197 SCHIP1 (ENSACAG00000006975) ENSACAG00000028736 IFT80 (ENSACAG00000007008) SMC4 (ENSACAG00000007074) Laterata ANCESTRAL SPECIES ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00950000183207.b.c.b ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Common wall lizard MODERN SPECIES 13 GPR149 (ENSPMRG00000009850) MME (ENSPMRG00000009855) ENSPMRG00000009866 ENSPMRG00000009875 PLCH1 (ENSPMRG00000009890) C3orf33 (ENSPMRG00000009919) SLC33A1 (ENSPMRG00000009920) GMPS (ENSPMRG00000009928) ENSPMRG00000009953 KCNAB1 (ENSPMRG00000009966) ENSPMRG00000009983 SSR3 (ENSPMRG00000009989) TIPARP (ENSPMRG00000009998) LEKR1 (ENSPMRG00000010016) VEPH1 (ENSPMRG00000010035) PTX3 (ENSPMRG00000010050) ##22 ENSPMRG00000003905 ENSPMRG00000003907 SHOX2 (ENSPMRG00000003913) RSRC1 (ENSPMRG00000003920) MLF1 (ENSPMRG00000003927) GFM1 (ENSPMRG00000003943) LXN (ENSPMRG00000004000) RARRES1 (ENSPMRG00000004007) MFSD1 (ENSPMRG00000004029) IQCJ (ENSPMRG00000004054) SCHIP1 (ENSPMRG00000004067) ENSPMRG00000004080 ENSPMRG00000004091 C3orf80 (ENSPMRG00000004118) IFT80 (ENSPMRG00000004126) Argentine black and white tegu MODERN SPECIES 21 GPR149 (ENSSMRG00000003478) MME (ENSSMRG00000003452) ENSSMRG00000003439 ENSSMRG00000003436 PLCH1 (ENSSMRG00000003423) C3orf33 (ENSSMRG00000003415) SLC33A1 (ENSSMRG00000003412) GMPS (ENSSMRG00000003393) ENSSMRG00000002028 KCNAB1 (ENSSMRG00000001682) SSR3 (ENSSMRG00000001650) TIPARP (ENSSMRG00000001646) ENSSMRG00000001629 LEKR1 (ENSSMRG00000001605) CCNL1 (ENSSMRG00000001583) PTX3 (ENSSMRG00000001575) ##22 VEPH1 (ENSSMRG00000001521) SHOX2 (ENSSMRG00000001482) RSRC1 (ENSSMRG00000001470) MLF1 (ENSSMRG00000001439) LXN (ENSSMRG00000001436) GFM1 (ENSSMRG00000001422) RARRES1 (ENSSMRG00000001415) MFSD1 (ENSSMRG00000000773) IQCJ (ENSSMRG00000000758) SCHIP1 (ENSSMRG00000000735) ENSSMRG00000000702 ENSSMRG00000000618 C3orf80 (ENSSMRG00000000610) IFT80 (ENSSMRG00000000555) SMC4 (ENSSMRG00000000502) tuatara MODERN SPECIES 1215 MME (ENSSPUG00000015405) ENSSPUG00000015438 PLCH1 (ENSSPUG00000015450) C3orf33 (ENSSPUG00000015495) SLC33A1 (ENSSPUG00000015504) ENSSPUG00000015523 ENSSPUG00000015567 KCNAB1 (ENSSPUG00000015736) SSR3 (ENSSPUG00000015748) TIPARP (ENSSPUG00000015764) LEKR1 (ENSSPUG00000015780) CCNL1 (ENSSPUG00000015793) VEPH1 (ENSSPUG00000015803) PTX3 (ENSSPUG00000015818) ##22 ENSSPUG00000015823 Mammalia ANCESTRAL SPECIES 7 ENSGT00390000003715 ENSGT00940000156745 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Theria ANCESTRAL SPECIES 5 ENSGT00940000156745 ENSGT00940000166505 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Opossum MODERN SPECIES 6 RAP2B (ENSMODG00000024599) ARHGEF26 (ENSMODG00000015830) DHX36 (ENSMODG00000015820) GPR149 (ENSMODG00000015808) MME (ENSMODG00000015805) PLCH1 (ENSMODG00000015790) SLC33A1 (ENSMODG00000015775) GMPS (ENSMODG00000015770) VN2R653 (ENSMODG00000015766) KCNAB1 (ENSMODG00000015758) SSR3 (ENSMODG00000015747) TIPARP (ENSMODG00000015744) LEKR1 (ENSMODG00000015743) CCNL1 (ENSMODG00000015703) ENSMODG00000024619 PTX3 (ENSMODG00000015690) ##22 VEPH1 (ENSMODG00000015689) SHOX2 (ENSMODG00000048794) RSRC1 (ENSMODG00000015684) MLF1 (ENSMODG00000015680) LXN (ENSMODG00000015677) GFM1 (ENSMODG00000015673) ENSMODG00000038088 IFT80 (ENSMODG00000016334) ENSMODG00000016488 ENSMODG00000027514 ENSMODG00000016325 ENSMODG00000048403 ENSMODG00000016324 ENSMODG00000018630 KPNA4 (ENSMODG00000016320) Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Diprotodontia ANCESTRAL SPECIES 17 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000162903.f.b Diprotodontia_a ANCESTRAL SPECIES 19 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Common wonbat MODERN SPECIES 1046 DHX36 (ENSVURG00010017291) GPR149 (ENSVURG00010017273) MME (ENSVURG00010017187) ENSVURG00010017174 PLCH1 (ENSVURG00010017004) ENSVURG00010016972 SLC33A1 (ENSVURG00010016955) GMPS (ENSVURG00010016941) ENSVURG00010016928 KCNAB1 (ENSVURG00010016914) SSR3 (ENSVURG00010016903) TIPARP (ENSVURG00010016896) ENSVURG00010016886 ENSVURG00010016876 CCNL1 (ENSVURG00010016857) PTX3 (ENSVURG00010016844) ##22 VEPH1 (ENSVURG00010016819) SHOX2 (ENSVURG00010016800) RSRC1 (ENSVURG00010016788) MLF1 (ENSVURG00010016775) ENSVURG00010016763 GFM1 (ENSVURG00010016730) RARRES1 (ENSVURG00010016715) MFSD1 (ENSVURG00010016698) ENSVURG00010016688 IQCJ (ENSVURG00010016672) ENSVURG00010016645 IL12A (ENSVURG00010016620) ENSVURG00010016584 C3orf80 (ENSVURG00010016571) IFT80 (ENSVURG00010016526) koala MODERN SPECIES 33 DHX36 (ENSPCIG00000000045) GPR149 (ENSPCIG00000000044) MME (ENSPCIG00000000041) PLCH1 (ENSPCIG00000000039) C3orf33 (ENSPCIG00000000038) SLC33A1 (ENSPCIG00000000037) GMPS (ENSPCIG00000000036) ENSPCIG00000000035 ENSPCIG00000037318 KCNAB1 (ENSPCIG00000003598) ENSPCIG00000003630 TIPARP (ENSPCIG00000003641) ENSPCIG00000003648 ENSPCIG00000031903 ENSPCIG00000003670 PTX3 (ENSPCIG00000036781) ##22 VEPH1 (ENSPCIG00000003684) SHOX2 (ENSPCIG00000001160) RSRC1 (ENSPCIG00000032999) MLF1 (ENSPCIG00000020160) LXN (ENSPCIG00000022681) GFM1 (ENSPCIG00000020195) RARRES1 (ENSPCIG00000000244) MFSD1 (ENSPCIG00000004651) ENSPCIG00000005197 ENSPCIG00000033482 ENSPCIG00000000154 IL12A (ENSPCIG00000007582) ENSPCIG00000007589 IFT80 (ENSPCIG00000028664) SMC4 (ENSPCIG00000028662) Wallaby MODERN SPECIES 6842 VEPH1 (ENSMEUG00000011998) PTX3 (ENSMEUG00000012019) ##22 Tasmanian devil MODERN SPECIES 2 DHX36 (ENSSHAG00000016292) GPR149 (ENSSHAG00000029857) MME (ENSSHAG00000013418) STRIT1 (ENSSHAG00000031937) PLCH1 (ENSSHAG00000012063) ENSSHAG00000028439 SLC33A1 (ENSSHAG00000029855) GMPS (ENSSHAG00000010345) ENSSHAG00000009677 KCNAB1 (ENSSHAG00000004797) SSR3 (ENSSHAG00000023585) TIPARP (ENSSHAG00000028913) ENSSHAG00000026588 CCNL1 (ENSSHAG00000018819) VEPH1 (ENSSHAG00000018730) PTX3 (ENSSHAG00000032216) ##22 ENSSHAG00000025260 RSRC1 (ENSSHAG00000021746) MLF1 (ENSSHAG00000017825) GFM1 (ENSSHAG00000017772) LXN (ENSSHAG00000023262) ENSSHAG00000025059 MFSD1 (ENSSHAG00000031081) ENSSHAG00000028509 ENSSHAG00000023699 IL12A (ENSSHAG00000004838) ENSSHAG00000021892 C3orf80 (ENSSHAG00000026896) IFT80 (ENSSHAG00000017271) SMC4 (ENSSHAG00000017214) ENSSHAG00000024143 Eutheria ANCESTRAL SPECIES 5 ENSGT00940000156745 ENSGT00940000166505 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 Primates ANCESTRAL SPECIES 1 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 Simiiformes ANCESTRAL SPECIES 1 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000155901.a.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000155901.a.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000155901.a.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Pan ANCESTRAL SPECIES 2 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000154891.g.a.b.a.a ENSGT00390000008647.e.a.a.a.b.a.a ENSGT00390000017288.d ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000154281.m.b.a.a.b.a ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Chimpanzee MODERN SPECIES 16 PLCH1 (ENSPTRG00000015551) C3H3orf33 (ENSPTRG00000015553) SLC33A1 (ENSPTRG00000015554) GMPS (ENSPTRG00000015555) ENSPTRG00000032585 ENSPTRG00000041304 ENSPTRG00000052355 ENSPTRG00000051749 KCNAB1 (ENSPTRG00000044809) SSR3 (ENSPTRG00000048398) TIPARP (ENSPTRG00000015561) ENSPTRG00000040050 LEKR1 (ENSPTRG00000024220) CCNL1 (ENSPTRG00000015563) VEPH1 (ENSPTRG00000022665) PTX3 (ENSPTRG00000015565) ##22 SLC66A1L (ENSPTRG00000015566) SHOX2 (ENSPTRG00000023041) RSRC1 (ENSPTRG00000043498) MLF1 (ENSPTRG00000015569) GFM1 (ENSPTRG00000015570) LXN (ENSPTRG00000015571) RARRES1 (ENSPTRG00000015572) MFSD1 (ENSPTRG00000022830) IQCJ (ENSPTRG00000033877) SCHIP1 (ENSPTRG00000015575) IL12A (ENSPTRG00000015576) ENSPTRG00000005970 C3H3orf80 (ENSPTRG00000051547) IFT80 (ENSPTRG00000015578) SMC4 (ENSPTRG00000015579) Bonobo MODERN SPECIES 16 ENSPPAG00000037955 PLCH1 (ENSPPAG00000015015) C3orf33 (ENSPPAG00000040302) SLC33A1 (ENSPPAG00000028834) GMPS (ENSPPAG00000042787) ENSPPAG00000031281 ENSPPAG00000008889 ENSPPAG00000031413 KCNAB1 (ENSPPAG00000030046) SSR3 (ENSPPAG00000034664) TIPARP (ENSPPAG00000029528) ENSPPAG00000033599 LEKR1 (ENSPPAG00000028869) CCNL1 (ENSPPAG00000033713) VEPH1 (ENSPPAG00000034788) PTX3 (ENSPPAG00000035181) ##22 SHOX2 (ENSPPAG00000022372) RSRC1 (ENSPPAG00000034990) MLF1 (ENSPPAG00000027183) GFM1 (ENSPPAG00000033881) LXN (ENSPPAG00000040496) ENSPPAG00000043634 MFSD1 (ENSPPAG00000028522) ENSPPAG00000044100 ENSPPAG00000030192 IL12A (ENSPPAG00000038366) C3orf80 (ENSPPAG00000028260) IFT80 (ENSPPAG00000041744) SMC4 (ENSPPAG00000042464) ENSPPAG00000030473 KPNA4 (ENSPPAG00000003969) Human MODERN SPECIES 15 ARHGEF26 (ENSG00000114790) DHX36 (ENSG00000174953) GPR149 (ENSG00000174948) MME (ENSG00000196549) STRIT1 (ENSG00000240045) PLCH1 (ENSG00000114805) C3orf33 (ENSG00000174928) SLC33A1 (ENSG00000169359) GMPS (ENSG00000163655) KCNAB1 (ENSG00000169282) SSR3 (ENSG00000114850) TIPARP (ENSG00000163659) LEKR1 (ENSG00000197980) CCNL1 (ENSG00000163660) VEPH1 (ENSG00000197415) PTX3 (ENSG00000163661) ##22 SHOX2 (ENSG00000168779) RSRC1 (ENSG00000174891) MLF1 (ENSG00000178053) GFM1 (ENSG00000168827) LXN (ENSG00000079257) RARRES1 (ENSG00000118849) MFSD1 (ENSG00000118855) IQCJ-SCHIP1 (ENSG00000283154) IQCJ (ENSG00000214216) SCHIP1 (ENSG00000151967) IL12A (ENSG00000168811) C3orf80 (ENSG00000180044) IFT80 (ENSG00000068885) SMC4 (ENSG00000113810) TRIM59 (ENSG00000213186) Gorilla MODERN SPECIES 16 PLCH1 (ENSGGOG00000009552) ENSGGOG00000039947 ENSGGOG00000038553 C3orf33 (ENSGGOG00000024967) SLC33A1 (ENSGGOG00000013029) GMPS (ENSGGOG00000017082) ENSGGOG00000041405 ENSGGOG00000024916 KCNAB1 (ENSGGOG00000007488) ENSGGOG00000023817 SSR3 (ENSGGOG00000024038) TIPARP (ENSGGOG00000026270) LEKR1 (ENSGGOG00000025297) CCNL1 (ENSGGOG00000006249) VEPH1 (ENSGGOG00000034894) PTX3 (ENSGGOG00000015338) ##22 ENSGGOG00000028322 SHOX2 (ENSGGOG00000011637) RSRC1 (ENSGGOG00000042322) MLF1 (ENSGGOG00000022629) GFM1 (ENSGGOG00000003085) LXN (ENSGGOG00000003092) RARRES1 (ENSGGOG00000011629) MFSD1 (ENSGGOG00000024126) ENSGGOG00000003898 IQCJ-SCHIP1 (ENSGGOG00000009987) IL12A (ENSGGOG00000006828) ENSGGOG00000037834 C3orf80 (ENSGGOG00000043723) IFT80 (ENSGGOG00000039200) SMC4 (ENSGGOG00000013735) Orangutan MODERN SPECIES 16 DHX36 (ENSPPYG00000014222) GPR149 (ENSPPYG00000014223) MME (ENSPPYG00000014224) STRIT1 (ENSPPYG00000039457) PLCH1 (ENSPPYG00000014225) C3orf33 (ENSPPYG00000014227) SLC33A1 (ENSPPYG00000014228) GMPS (ENSPPYG00000014229) KCNAB1 (ENSPPYG00000014232) SSR3 (ENSPPYG00000014233) TIPARP (ENSPPYG00000014234) ENSPPYG00000032921 LEKR1 (ENSPPYG00000014236) CCNL1 (ENSPPYG00000014237) VEPH1 (ENSPPYG00000014238) PTX3 (ENSPPYG00000014239) ##22 ENSPPYG00000040849 SHOX2 (ENSPPYG00000032262) RSRC1 (ENSPPYG00000014242) MLF1 (ENSPPYG00000037889) GFM1 (ENSPPYG00000014244) LXN (ENSPPYG00000014245) RARRES1 (ENSPPYG00000014246) MFSD1 (ENSPPYG00000014247) ENSPPYG00000014249 ENSPPYG00000014252 IL12A (ENSPPYG00000014253) C3orf80 (ENSPPYG00000014254) IFT80 (ENSPPYG00000014255) SMC4 (ENSPPYG00000014256) TRIM59 (ENSPPYG00000034374) Gibbon MODERN SPECIES 1 STRIT1 (ENSNLEG00000028242) ENSNLEG00000030011 PLCH1 (ENSNLEG00000003776) C3orf33 (ENSNLEG00000032487) SLC33A1 (ENSNLEG00000031523) GMPS (ENSNLEG00000003856) ENSNLEG00000034563 KCNAB1 (ENSNLEG00000028736) ENSNLEG00000029311 SSR3 (ENSNLEG00000003961) TIPARP (ENSNLEG00000003977) ENSNLEG00000028927 LEKR1 (ENSNLEG00000003993) CCNL1 (ENSNLEG00000003998) VEPH1 (ENSNLEG00000004031) PTX3 (ENSNLEG00000004099) ##22 ENSNLEG00000004110 SHOX2 (ENSNLEG00000004124) RSRC1 (ENSNLEG00000004137) MLF1 (ENSNLEG00000004153) GFM1 (ENSNLEG00000004176) LXN (ENSNLEG00000033843) ENSNLEG00000004243 MFSD1 (ENSNLEG00000004249) ENSNLEG00000030545 ENSNLEG00000004345 ENSNLEG00000004371 C3orf80 (ENSNLEG00000034275) IFT80 (ENSNLEG00000004380) SMC4 (ENSNLEG00000004457) ENSNLEG00000029782 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000155901.a.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b.u ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Macaca ANCESTRAL SPECIES 5 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00910000148059 ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b.u ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Pig-tailed macaque MODERN SPECIES 147 STRIT1 (ENSMNEG00000034812) PLCH1 (ENSMNEG00000041537) C3orf33 (ENSMNEG00000039740) SLC33A1 (ENSMNEG00000041243) GMPS (ENSMNEG00000029760) ENSMNEG00000037898 ENSMNEG00000038579 KCNAB1 (ENSMNEG00000030568) SSR3 (ENSMNEG00000043849) TIPARP (ENSMNEG00000041085) LEKR1 (ENSMNEG00000032090) CCNL1 (ENSMNEG00000042991) PTX3 (ENSMNEG00000032162) ##22 VEPH1 (ENSMNEG00000032781) ENSMNEG00000013326 SHOX2 (ENSMNEG00000044817) RSRC1 (ENSMNEG00000037212) MLF1 (ENSMNEG00000037020) LXN (ENSMNEG00000031431) GFM1 (ENSMNEG00000033245) RARRES1 (ENSMNEG00000039722) MFSD1 (ENSMNEG00000040690) IQCJ (ENSMNEG00000033302) ENSMNEG00000039573 IL12A (ENSMNEG00000044033) C3orf80 (ENSMNEG00000009440) IFT80 (ENSMNEG00000031375) SMC4 (ENSMNEG00000033241) Macaca_a ANCESTRAL SPECIES 5 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000156760 ENSGT00390000000970.b.u ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00950000183087.A.a.b.b.g.e.b.b.b.b.a ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 Crab-eating macaque MODERN SPECIES 11 GPR149 (ENSMFAG00000030860) MME (ENSMFAG00000039633) STRIT1 (ENSMFAG00000039645) PLCH1 (ENSMFAG00000042166) ENSMFAG00000039668 C3orf33 (ENSMFAG00000004239) SLC33A1 (ENSMFAG00000057969) GMPS (ENSMFAG00000039350) ENSMFAG00000035446 KCNAB1 (ENSMFAG00000032077) SSR3 (ENSMFAG00000065033) TIPARP (ENSMFAG00000040611) LEKR1 (ENSMFAG00000032575) CCNL1 (ENSMFAG00000030104) VEPH1 (ENSMFAG00000043410) PTX3 (ENSMFAG00000040863) ##22 ENSMFAG00000002259 ENSMFAG00000011761 SHOX2 (ENSMFAG00000029366) RSRC1 (ENSMFAG00000006023) MLF1 (ENSMFAG00000032723) GFM1 (ENSMFAG00000035731) LXN (ENSMFAG00000038453) RARRES1 (ENSMFAG00000023184) MFSD1 (ENSMFAG00000041451) IQCJ (ENSMFAG00000045301) SCHIP1 (ENSMFAG00000002886) IL12A (ENSMFAG00000032832) ENSMFAG00000063065 IFT80 (ENSMFAG00000044919) SMC4 (ENSMFAG00000003430) Rhesus MODERN SPECIES 11 GPR149 (ENSMMUG00000056924) MME (ENSMMUG00000006662) STRIT1 (ENSMMUG00000060633) PLCH1 (ENSMMUG00000018341) C2H3orf33 (ENSMMUG00000049932) SLC33A1 (ENSMMUG00000040085) GMPS (ENSMMUG00000007324) ENSMMUG00000062803 KCNAB1 (ENSMMUG00000016968) SSR3 (ENSMMUG00000016970) TIPARP (ENSMMUG00000000366) LEKR1 (ENSMMUG00000016495) ENSMMUG00000058575 CCNL1 (ENSMMUG00000016497) VEPH1 (ENSMMUG00000022848) PTX3 (ENSMMUG00000062582) ##22 SLC66A1L (ENSMMUG00000012046) ENSMMUG00000051699 SHOX2 (ENSMMUG00000019030) RSRC1 (ENSMMUG00000004956) MLF1 (ENSMMUG00000004958) GFM1 (ENSMMUG00000004961) LXN (ENSMMUG00000004963) RARRES1 (ENSMMUG00000014825) MFSD1 (ENSMMUG00000023510) SCHIP1 (ENSMMUG00000023081) ENSMMUG00000064893 IL12A (ENSMMUG00000023084) C2H3orf80 (ENSMMUG00000059508) IFT80 (ENSMMUG00000017282) SMC4 (ENSMMUG00000017291) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00910000148059 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b.u ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.e ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00950000183762 ENSGT00960000187632.b.a.a.b ENSGT00390000011127 ENSGT00390000016906 Olive baboon MODERN SPECIES 11 DHX36 (ENSPANG00000007914) GPR149 (ENSPANG00000010538) MME (ENSPANG00000005579) STRIT1 (ENSPANG00000034540) ENSPANG00000034846 PLCH1 (ENSPANG00000020169) C3orf33 (ENSPANG00000011556) SLC33A1 (ENSPANG00000015696) GMPS (ENSPANG00000017625) ENSPANG00000029453 KCNAB1 (ENSPANG00000015726) ENSPANG00000006131 TIPARP (ENSPANG00000007235) LEKR1 (ENSPANG00000006077) CCNL1 (ENSPANG00000015798) PTX3 (ENSPANG00000015656) ##22 VEPH1 (ENSPANG00000010193) ENSPANG00000006508 ENSPANG00000038418 ENSPANG00000037645 ENSPANG00000008659 SHOX2 (ENSPANG00000008663) RSRC1 (ENSPANG00000013402) MLF1 (ENSPANG00000017579) LXN (ENSPANG00000013296) GFM1 (ENSPANG00000016512) RARRES1 (ENSPANG00000006228) ENSPANG00000047983 MFSD1 (ENSPANG00000002800) ENSPANG00000043665 IQCJ (ENSPANG00000033072) Cercopithecinae_d ANCESTRAL SPECIES 81 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00910000148059 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b.u ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.e ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00950000183762 ENSGT00950000183010.a.a.a.b.b.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 Drill MODERN SPECIES 581 PTX3 (ENSMLEG00000004048) ##22 ENSMLEG00000009467 ENSMLEG00000033295 Sooty mangabey MODERN SPECIES 99 STRIT1 (ENSCATG00000043299) ENSCATG00000045341 PLCH1 (ENSCATG00000043865) C3orf33 (ENSCATG00000030263) SLC33A1 (ENSCATG00000034638) GMPS (ENSCATG00000031121) ENSCATG00000022003 ENSCATG00000039951 KCNAB1 (ENSCATG00000015065) ENSCATG00000037986 SSR3 (ENSCATG00000044932) TIPARP (ENSCATG00000030375) LEKR1 (ENSCATG00000045022) CCNL1 (ENSCATG00000035386) VEPH1 (ENSCATG00000029319) PTX3 (ENSCATG00000039761) ##22 ENSCATG00000011015 SHOX2 (ENSCATG00000036242) RSRC1 (ENSCATG00000036643) MLF1 (ENSCATG00000041224) GFM1 (ENSCATG00000037622) LXN (ENSCATG00000044907) RARRES1 (ENSCATG00000041879) MFSD1 (ENSCATG00000032129) IQCJ (ENSCATG00000036638) ENSCATG00000021185 ENSCATG00000016311 IL12A (ENSCATG00000041528) C3orf80 (ENSCATG00000016242) IFT80 (ENSCATG00000009307) SMC4 (ENSCATG00000023485) Vervet Monkey MODERN SPECIES 6 RAP2B (ENSCSAG00000018898) ARHGEF26 (ENSCSAG00000011952) DHX36 (ENSCSAG00000011962) GPR149 (ENSCSAG00000011972) MME (ENSCSAG00000011987) ENSCSAG00000012000 C3orf33 (ENSCSAG00000012008) SLC33A1 (ENSCSAG00000012012) GMPS (ENSCSAG00000012022) KCNAB1 (ENSCSAG00000012031) ENSCSAG00000012048 TIPARP (ENSCSAG00000012060) ENSCSAG00000012064 LEKR1 (ENSCSAG00000012071) CCNL1 (ENSCSAG00000012077) PTX3 (ENSCSAG00000012090) ##22 VEPH1 (ENSCSAG00000012098) ENSCSAG00000012112 SHOX2 (ENSCSAG00000012131) RSRC1 (ENSCSAG00000012145) MLF1 (ENSCSAG00000012151) LXN (ENSCSAG00000012154) GFM1 (ENSCSAG00000012162) RARRES1 (ENSCSAG00000012175) MFSD1 (ENSCSAG00000012186) ENSCSAG00000018896 SCHIP1 (ENSCSAG00000012193) IL12A (ENSCSAG00000012218) C3orf80 (ENSCSAG00000018894) IFT80 (ENSCSAG00000012233) SMC4 (ENSCSAG00000012248) Rhinopithecus ANCESTRAL SPECIES 257 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00390000017288.d ENSGT00940000155058.e.b ENSGT00940000156760 ENSGT00390000000970.b.p.a ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00950000183762 Golden snub-nosed monkey MODERN SPECIES 1252 ENSRROG00000033946 C3orf33 (ENSRROG00000033959) ENSRROG00000036896 SLC33A1 (ENSRROG00000040669) GMPS (ENSRROG00000035915) ENSRROG00000002902 KCNAB1 (ENSRROG00000003220) ENSRROG00000030984 SSR3 (ENSRROG00000037341) TIPARP (ENSRROG00000041667) LEKR1 (ENSRROG00000044541) CCNL1 (ENSRROG00000034433) VEPH1 (ENSRROG00000039187) PTX3 (ENSRROG00000035614) ##22 Black snub-nosed monkey MODERN SPECIES 1014 PTX3 (ENSRBIG00000024992) ##22 ENSRBIG00000038256 ENSRBIG00000024419 SHOX2 (ENSRBIG00000044489) RSRC1 (ENSRBIG00000032161) ENSRBIG00000024644 MLF1 (ENSRBIG00000038204) GFM1 (ENSRBIG00000031363) LXN (ENSRBIG00000040813) RARRES1 (ENSRBIG00000041313) MFSD1 (ENSRBIG00000044000) IQCJ (ENSRBIG00000039280) ENSRBIG00000006107 ENSRBIG00000039316 CMAS (ENSRBIG00000029767) ST8SIA1 (ENSRBIG00000032474) Platyrrhini ANCESTRAL SPECIES 22 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.a.b.c.a ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591.d ENSGT00940000156760 ENSGT00390000000970.b.n.a.a ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251.b ENSGT00730000111251.a ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00910000145701.a ENSGT00390000011127 ENSGT00390000016906 Cebidae ANCESTRAL SPECIES 22 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.a.b.c.a ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591.d ENSGT00940000156760 ENSGT00390000000970.b.n.a.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251.b ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00910000145701.a ENSGT00390000011127 ENSGT00390000016906 ENSGT00440000033499 Marmoset MODERN SPECIES 8 STRIT1 (ENSCJAG00000042341) ENSCJAG00000073626 ENSCJAG00000072151 ENSCJAG00000078846 PLCH1 (ENSCJAG00000000917) C3orf33 (ENSCJAG00000000910) SLC33A1 (ENSCJAG00000000902) GMPS (ENSCJAG00000000863) ENSCJAG00000001100 ENSCJAG00000065233 KCNAB1 (ENSCJAG00000004577) ENSCJAG00000045770 TIPARP (ENSCJAG00000004657) LEKR1 (ENSCJAG00000004676) CCNL1 (ENSCJAG00000004692) PTX3 (ENSCJAG00000004771) ##22 VEPH1 (ENSCJAG00000004747) ENSCJAG00000043693 ENSCJAG00000022309 ENSCJAG00000084466 SHOX2 (ENSCJAG00000073951) ENSCJAG00000072338 RSRC1 (ENSCJAG00000036696) MLF1 (ENSCJAG00000000352) LXN (ENSCJAG00000000386) GFM1 (ENSCJAG00000000363) RARRES1 (ENSCJAG00000000389) ENSCJAG00000055310 MFSD1 (ENSCJAG00000000395) IQCJ (ENSCJAG00000000412) ENSCJAG00000071072 Cebidae_a ANCESTRAL SPECIES 12 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000153773.a.a.b.c.a ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591.d ENSGT00940000156760 ENSGT00390000000970.b.n.a.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251.b ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00910000145701.a ENSGT00390000011127 ENSGT00390000016906 ENSGT00440000033499 ENSGT00900000141094.g Bolivian squirrel monkey MODERN SPECIES 54 ENSSBOG00000014186 GPR149 (ENSSBOG00000019206) MME (ENSSBOG00000016144) ENSSBOG00000028023 STRIT1 (ENSSBOG00000010194) ENSSBOG00000005590 PLCH1 (ENSSBOG00000035699) C3orf33 (ENSSBOG00000022745) SLC33A1 (ENSSBOG00000022127) GMPS (ENSSBOG00000033046) KCNAB1 (ENSSBOG00000022593) ENSSBOG00000036066 TIPARP (ENSSBOG00000030511) LEKR1 (ENSSBOG00000035709) CCNL1 (ENSSBOG00000035767) PTX3 (ENSSBOG00000030163) ##22 VEPH1 (ENSSBOG00000027631) ENSSBOG00000021272 SHOX2 (ENSSBOG00000035166) RSRC1 (ENSSBOG00000027990) MLF1 (ENSSBOG00000024403) LXN (ENSSBOG00000034211) GFM1 (ENSSBOG00000023252) RARRES1 (ENSSBOG00000032081) ENSSBOG00000026376 MFSD1 (ENSSBOG00000031153) IQCJ (ENSSBOG00000013244) ENSSBOG00000031233 ENSSBOG00000021868 IL12A (ENSSBOG00000034138) ENSSBOG00000032637 Capuchin MODERN SPECIES 270 LEKR1 (ENSCCAG00000024625) CCNL1 (ENSCCAG00000004737) PTX3 (ENSCCAG00000017300) ##22 VEPH1 (ENSCCAG00000024053) ENSCCAG00000000022 SHOX2 (ENSCCAG00000026119) RSRC1 (ENSCCAG00000032077) MLF1 (ENSCCAG00000028078) LXN (ENSCCAG00000020030) GFM1 (ENSCCAG00000025561) RARRES1 (ENSCCAG00000032647) MFSD1 (ENSCCAG00000038095) IQCJ (ENSCCAG00000030767) ENSCCAG00000024648 ENSCCAG00000028195 IL12A (ENSCCAG00000034876) Mas night monkey MODERN SPECIES 400 STRIT1 (ENSANAG00000035345) ENSANAG00000026678 PLCH1 (ENSANAG00000037829) C3orf33 (ENSANAG00000037818) SLC33A1 (ENSANAG00000036331) ENSANAG00000036394 KCNAB1 (ENSANAG00000032104) ENSANAG00000025983 TIPARP (ENSANAG00000036588) LEKR1 (ENSANAG00000025264) CCNL1 (ENSANAG00000035618) ENSANAG00000037179 PTX3 (ENSANAG00000021902) ##22 VEPH1 (ENSANAG00000020731) ENSANAG00000036049 SHOX2 (ENSANAG00000013863) ENSANAG00000029278 MLF1 (ENSANAG00000026540) LXN (ENSANAG00000024771) GFM1 (ENSANAG00000035983) RARRES1 (ENSANAG00000027312) MFSD1 (ENSANAG00000024294) ENSANAG00000025825 ENSANAG00000021265 ENSANAG00000021216 ENSANAG00000018582 ENSANAG00000000056 IL12A (ENSANAG00000028740) Tarsier MODERN SPECIES 6829 PTX3 (ENSTSYG00000006774) ##22 ENSTSYG00000025715 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Lemuriformes ANCESTRAL SPECIES 30 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Mouse lemur MODERN SPECIES MECOM (ENSMICG00000049200) GOLIM4 (ENSMICG00000048403) ENSMICG00000048463 SERPINI1 (ENSMICG00000049293) ENSMICG00000049445 WDR49 (ENSMICG00000048888) SERPINI2 (ENSMICG00000049123) ZBBX (ENSMICG00000049374) ENSMICG00000049058 BCHE (ENSMICG00000049075) SLITRK3 (ENSMICG00000049548) SI (ENSMICG00000049323) ENSMICG00000048943 ENSMICG00000048227 CCNL1 (ENSMICG00000049517) PTX3 (ENSMICG00000049341) ##22 VEPH1 (ENSMICG00000049487) ENSMICG00000049190 ENSMICG00000049353 ENSMICG00000049516 SHOX2 (ENSMICG00000049132) ENSMICG00000049450 ENSMICG00000048785 MLF1 (ENSMICG00000048928) LXN (ENSMICG00000049388) GFM1 (ENSMICG00000049086) RARRES1 (ENSMICG00000049120) MFSD1 (ENSMICG00000049472) IQCJ (ENSMICG00000049562) ENSMICG00000049157 IL12A (ENSMICG00000049316) Lemuriformes_a ANCESTRAL SPECIES 77 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 Coquerels sifaka MODERN SPECIES 274 ENSPCOG00000022566 ARHGEF26 (ENSPCOG00000012536) ENSPCOG00000011695 GPR149 (ENSPCOG00000027399) MME (ENSPCOG00000013543) STRIT1 (ENSPCOG00000015379) PLCH1 (ENSPCOG00000028591) C3orf33 (ENSPCOG00000007724) SLC33A1 (ENSPCOG00000021978) GMPS (ENSPCOG00000024460) KCNAB1 (ENSPCOG00000013343) SSR3 (ENSPCOG00000017371) TIPARP (ENSPCOG00000018471) LEKR1 (ENSPCOG00000008154) CCNL1 (ENSPCOG00000015763) PTX3 (ENSPCOG00000024857) ##22 VEPH1 (ENSPCOG00000018922) ENSPCOG00000001436 SHOX2 (ENSPCOG00000028731) RSRC1 (ENSPCOG00000024048) MLF1 (ENSPCOG00000024606) LXN (ENSPCOG00000027480) GFM1 (ENSPCOG00000022259) RARRES1 (ENSPCOG00000028694) MFSD1 (ENSPCOG00000017381) IQCJ (ENSPCOG00000015167) ENSPCOG00000002157 IL12A (ENSPCOG00000019947) Greater bamboo lemur MODERN SPECIES 448 DHX36 (ENSPSMG00000003457) GPR149 (ENSPSMG00000003410) MME (ENSPSMG00000003300) STRIT1 (ENSPSMG00000003191) PLCH1 (ENSPSMG00000003152) C3orf33 (ENSPSMG00000003083) ENSPSMG00000003046 GMPS (ENSPSMG00000003004) ENSPSMG00000002894 KCNAB1 (ENSPSMG00000002464) SSR3 (ENSPSMG00000002232) TIPARP (ENSPSMG00000002213) ENSPSMG00000002207 LEKR1 (ENSPSMG00000002201) CCNL1 (ENSPSMG00000002156) PTX3 (ENSPSMG00000002124) ##22 VEPH1 (ENSPSMG00000002055) ENSPSMG00000002005 SHOX2 (ENSPSMG00000001995) Bushbaby MODERN SPECIES 191 ARHGEF26 (ENSOGAG00000011252) DHX36 (ENSOGAG00000011256) GPR149 (ENSOGAG00000011263) MME (ENSOGAG00000010918) PLCH1 (ENSOGAG00000031120) C3orf33 (ENSOGAG00000014996) SLC33A1 (ENSOGAG00000008518) GMPS (ENSOGAG00000008523) ENSOGAG00000028827 KCNAB1 (ENSOGAG00000010587) SSR3 (ENSOGAG00000010589) TIPARP (ENSOGAG00000003455) ENSOGAG00000016012 CCNL1 (ENSOGAG00000011592) VEPH1 (ENSOGAG00000007526) PTX3 (ENSOGAG00000007529) ##22 SHOX2 (ENSOGAG00000008288) ENSOGAG00000008290 ENSOGAG00000025716 MLF1 (ENSOGAG00000008294) GFM1 (ENSOGAG00000008298) RARRES1 (ENSOGAG00000008313) MFSD1 (ENSOGAG00000014711) ENSOGAG00000026335 ENSOGAG00000009312 IL12A (ENSOGAG00000013000) ENSOGAG00000025939 IFT80 (ENSOGAG00000010032) SMC4 (ENSOGAG00000010034) ENSOGAG00000026112 GRID2 (ENSOGAG00000004937) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Tree shrew MODERN SPECIES 3128 CCNL1 (ENSTBEG00000007980) VEPH1 (ENSTBEG00000008938) PTX3 (ENSTBEG00000002138) ##22 Glires ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Lagomorpha ANCESTRAL SPECIES 6 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT01080000259023 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00440000033499 ENSGT00900000141094 Rabbit MODERN SPECIES 5 ENSOCUG00000029864 PLCH1 (ENSOCUG00000009260) C3orf33 (ENSOCUG00000017756) SLC33A1 (ENSOCUG00000001478) GMPS (ENSOCUG00000001480) ENSOCUG00000002317 ENSOCUG00000002314 KCNAB1 (ENSOCUG00000007885) ENSOCUG00000011704 SSR3 (ENSOCUG00000007898) TIPARP (ENSOCUG00000014910) LEKR1 (ENSOCUG00000011073) ENSOCUG00000034465 CCNL1 (ENSOCUG00000003451) VEPH1 (ENSOCUG00000010133) PTX3 (ENSOCUG00000010142) ##22 ENSOCUG00000035608 SHOX2 (ENSOCUG00000029123) RSRC1 (ENSOCUG00000030494) MLF1 (ENSOCUG00000013549) GFM1 (ENSOCUG00000013561) LXN (ENSOCUG00000024041) RARRES1 (ENSOCUG00000029263) ENSOCUG00000026179 MFSD1 (ENSOCUG00000001272) ENSOCUG00000023648 IQCJ (ENSOCUG00000022809) ENSOCUG00000011278 IL12A (ENSOCUG00000010149) ENSOCUG00000031459 ENSOCUG00000033720 Rodentia ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Myomorpha ANCESTRAL SPECIES 38 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Muroidea ANCESTRAL SPECIES 44 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Murinae ANCESTRAL SPECIES 5 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j.d ENSGT00940000160473.j.c.a ENSGT00940000160473.j.c.b ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Mus ANCESTRAL SPECIES 7 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j.d.a ENSGT00940000160473.j.c.a ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j.d.a ENSGT00940000160473.j.c.a ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Mus_B ANCESTRAL SPECIES 8 ENSGT00390000003715 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j.d.a ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Mouse MODERN SPECIES 12 Gmps (ENSMUSG00000027823) Vmn2r1 (ENSMUSG00000027824) Vmn2r2 (ENSMUSG00000043897) Vmn2r3 (ENSMUSG00000091572) Vmn2r128 (ENSMUSG00000091967) Vmn2r4 (ENSMUSG00000092049) Vmn2r5 (ENSMUSG00000068999) Vmn2r6 (ENSMUSG00000090581) Vmn2r7 (ENSMUSG00000062200) Kcnab1 (ENSMUSG00000027827) Ssr3 (ENSMUSG00000027828) Tiparp (ENSMUSG00000034640) Lekr1 (ENSMUSG00000074579) Ccnl1 (ENSMUSG00000027829) Veph1 (ENSMUSG00000027831) Ptx3 (ENSMUSG00000027832) ##22 Shox2 (ENSMUSG00000027833) Rsrc1 (ENSMUSG00000034544) Mlf1 (ENSMUSG00000048416) Gfm1 (ENSMUSG00000027774) Lxn (ENSMUSG00000047557) Rarres1 (ENSMUSG00000049404) Mfsd1 (ENSMUSG00000027775) Iqcj (ENSMUSG00000051777) Iqschfp (ENSMUSG00000102422) Schip1 (ENSMUSG00000027777) Il12a (ENSMUSG00000027776) 1110032F04Rik (ENSMUSG00000046999) Ift80 (ENSMUSG00000027778) Smc4 (ENSMUSG00000034349) Trim59 (ENSMUSG00000034317) Mus_C ANCESTRAL SPECIES 6 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j.d.a ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Steppe mouse MODERN SPECIES 3367 Ptx3 (ENSMSIG00000025194) ##22 ENSMSIG00000025177 Shox2 (ENSMSIG00000025154) Rsrc1 (ENSMSIG00000025037) Mlf1 (ENSMSIG00000025018) Lxn (ENSMSIG00000025005) Gfm1 (ENSMSIG00000024997) Rarres1 (ENSMSIG00000024983) Mfsd1 (ENSMSIG00000024948) ENSMSIG00000024939 ENSMSIG00000024873 ENSMSIG00000024849 ENSMSIG00000024823 Schip1 (ENSMSIG00000024744) Il12a (ENSMSIG00000024713) ENSMSIG00000024708 spretus MODERN SPECIES 12 Plch1 (MGP_SPRETEiJ_G0025975) E130311K13Rik (MGP_SPRETEiJ_G0025976) Slc33a1 (MGP_SPRETEiJ_G0025977) MGP_SPRETEiJ_G0025978 MGP_SPRETEiJ_G0025979 MGP_SPRETEiJ_G0025980 MGP_SPRETEiJ_G0025981 MGP_SPRETEiJ_G0025982 MGP_SPRETEiJ_G0025983 Kcnab1 (MGP_SPRETEiJ_G0025984) Ssr3 (MGP_SPRETEiJ_G0025985) Tiparp (MGP_SPRETEiJ_G0025986) MGP_SPRETEiJ_G0025987 Ccnl1 (MGP_SPRETEiJ_G0025988) Veph1 (MGP_SPRETEiJ_G0025989) Ptx3 (MGP_SPRETEiJ_G0025990) ##22 Shox2 (MGP_SPRETEiJ_G0025991) Rsrc1 (MGP_SPRETEiJ_G0025992) Mlf1 (MGP_SPRETEiJ_G0025993) Gfm1 (MGP_SPRETEiJ_G0025994) Lxn (MGP_SPRETEiJ_G0025995) Rarres1 (MGP_SPRETEiJ_G0025996) Mfsd1 (MGP_SPRETEiJ_G0025997) Iqcj (MGP_SPRETEiJ_G0025998) MGP_SPRETEiJ_G0025999 MGP_SPRETEiJ_G0026000 Il12a (MGP_SPRETEiJ_G0026001) MGP_SPRETEiJ_G0026002 1110032F04Rik (MGP_SPRETEiJ_G0026003) Ift80 (MGP_SPRETEiJ_G0026004) Smc4 (MGP_SPRETEiJ_G0026005) Ryukyu mouse MODERN SPECIES 12 Gpr149 (MGP_CAROLIEiJ_G0025033) Mme (MGP_CAROLIEiJ_G0025034) Plch1 (MGP_CAROLIEiJ_G0025035) MGP_CAROLIEiJ_G0025036 Slc33a1 (MGP_CAROLIEiJ_G0025037) Gmps (MGP_CAROLIEiJ_G0025038) MGP_CAROLIEiJ_G0025039 Vmn2r1 (MGP_CAROLIEiJ_G0025040) MGP_CAROLIEiJ_G0025041 Kcnab1 (MGP_CAROLIEiJ_G0025042) Ssr3 (MGP_CAROLIEiJ_G0025043) Tiparp (MGP_CAROLIEiJ_G0025044) MGP_CAROLIEiJ_G0025045 Ccnl1 (MGP_CAROLIEiJ_G0025046) Veph1 (MGP_CAROLIEiJ_G0025047) Ptx3 (MGP_CAROLIEiJ_G0025048) ##22 Shox2 (MGP_CAROLIEiJ_G0025049) Rsrc1 (MGP_CAROLIEiJ_G0025050) Mlf1 (MGP_CAROLIEiJ_G0025051) Gfm1 (MGP_CAROLIEiJ_G0025052) Lxn (MGP_CAROLIEiJ_G0025053) Rarres1 (MGP_CAROLIEiJ_G0025054) Mfsd1 (MGP_CAROLIEiJ_G0025055) Iqcj (MGP_CAROLIEiJ_G0025056) MGP_CAROLIEiJ_G0025057 MGP_CAROLIEiJ_G0025058 Il12a (MGP_CAROLIEiJ_G0025059) MGP_CAROLIEiJ_G0025060 1110032F04Rik (MGP_CAROLIEiJ_G0025061) Ift80 (MGP_CAROLIEiJ_G0025062) Smc4 (MGP_CAROLIEiJ_G0025063) Shrew mouse MODERN SPECIES 17 Dhx36 (MGP_PahariEiJ_G0026476) Gpr149 (MGP_PahariEiJ_G0026477) Mme (MGP_PahariEiJ_G0026478) Plch1 (MGP_PahariEiJ_G0026479) E130311K13Rik (MGP_PahariEiJ_G0026480) Slc33a1 (MGP_PahariEiJ_G0026481) Gmps (MGP_PahariEiJ_G0026482) Vmn2r1 (MGP_PahariEiJ_G0026483) MGP_PahariEiJ_G0026484 Kcnab1 (MGP_PahariEiJ_G0026485) Ssr3 (MGP_PahariEiJ_G0026486) Tiparp (MGP_PahariEiJ_G0026487) MGP_PahariEiJ_G0026488 Ccnl1 (MGP_PahariEiJ_G0026489) Veph1 (MGP_PahariEiJ_G0026490) Ptx3 (MGP_PahariEiJ_G0026491) ##22 Shox2 (MGP_PahariEiJ_G0026492) Rsrc1 (MGP_PahariEiJ_G0026493) Mlf1 (MGP_PahariEiJ_G0026494) Gfm1 (MGP_PahariEiJ_G0026495) Lxn (MGP_PahariEiJ_G0026496) Rarres1 (MGP_PahariEiJ_G0026497) Mfsd1 (MGP_PahariEiJ_G0026498) MGP_PahariEiJ_G0001977 Iqcj (MGP_PahariEiJ_G0026499) MGP_PahariEiJ_G0026500 MGP_PahariEiJ_G0026501 Il12a (MGP_PahariEiJ_G0026502) MGP_PahariEiJ_G0026503 1110032F04Rik (MGP_PahariEiJ_G0026504) Ift80 (MGP_PahariEiJ_G0026505) Rat MODERN SPECIES 11 Gmps (ENSRNOG00000051151) Vom2r44 (ENSRNOG00000030104) Vom2r45 (ENSRNOG00000064237) Vom2r46 (ENSRNOG00000068452) ENSRNOG00000064787 LOC120100835 (ENSRNOG00000066617) AABR07010333.1 (ENSRNOG00000031248) Vom2r47 (ENSRNOG00000028345) Kcnab1 (ENSRNOG00000056697) Ssr3 (ENSRNOG00000011148) Tiparp (ENSRNOG00000011238) Lekr1 (ENSRNOG00000031247) Ccnl1 (ENSRNOG00000011586) Veph1 (ENSRNOG00000012427) ENSRNOG00000069471 Ptx3 (ENSRNOG00000012280) ##22 Shox2 (ENSRNOG00000012478) Rsrc1 (ENSRNOG00000062777) Mlf1 (ENSRNOG00000012827) Gfm1 (ENSRNOG00000012873) Lxn (ENSRNOG00000013572) Rarres1 (ENSRNOG00000037853) Mfsd1 (ENSRNOG00000013790) ENSRNOG00000066920 Schip1 (ENSRNOG00000009276) Il12a (ENSRNOG00000009468) LOC100362176 (ENSRNOG00000009803) Ift80 (ENSRNOG00000009808) Smc4 (ENSRNOG00000010274) Trim59 (ENSRNOG00000010515) Kpna4 (ENSRNOG00000010768) Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Cricetinae ANCESTRAL SPECIES 13 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00940000168816 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Golden Hamster MODERN SPECIES 694 Arhgef26 (ENSMAUG00000020238) Dhx36 (ENSMAUG00000000158) Gpr149 (ENSMAUG00000002545) Mme (ENSMAUG00000005415) ENSMAUG00000010321 Plch1 (ENSMAUG00000015272) E130311K13Rik (ENSMAUG00000016143) Slc33a1 (ENSMAUG00000007872) Gmps (ENSMAUG00000009597) Kcnab1 (ENSMAUG00000008327) Ssr3 (ENSMAUG00000012131) Tiparp (ENSMAUG00000013170) ENSMAUG00000008702 Ccnl1 (ENSMAUG00000010127) Veph1 (ENSMAUG00000011592) Ptx3 (ENSMAUG00000013157) ##22 Shox2 (ENSMAUG00000010791) Rsrc1 (ENSMAUG00000012551) ENSMAUG00000014811 Gfm1 (ENSMAUG00000000611) Lxn (ENSMAUG00000005608) ENSMAUG00000010396 Mfsd1 (ENSMAUG00000011768) Chinese hamster chok1gshd MODERN SPECIES 352 ENSCGRG00001021700 Plch1 (ENSCGRG00001000217) E130311K13Rik (ENSCGRG00001024290) Slc33a1 (ENSCGRG00001018761) Gmps (ENSCGRG00001018772) Vmn2r1 (ENSCGRG00001023200) ENSCGRG00001017013 ENSCGRG00001005615 Kcnab1 (ENSCGRG00001005457) Ssr3 (ENSCGRG00001019723) Tiparp (ENSCGRG00001011123) ENSCGRG00001018287 ENSCGRG00001012986 Ccnl1 (ENSCGRG00001000165) ENSCGRG00001019867 Ptx3 (ENSCGRG00001000361) ##22 Veph1 (ENSCGRG00001013806) Shox2 (ENSCGRG00001011092) ENSCGRG00001004798 ENSCGRG00001016799 Lxn (ENSCGRG00001022023) GFM1 (ENSCGRG00001022095) Rarres1 (ENSCGRG00001019406) Mfsd1 (ENSCGRG00001015422) ENSCGRG00001016644 Schip1 (ENSCGRG00001023430) Il12a (ENSCGRG00001009859) ENSCGRG00001021940 1110032F04Rik (ENSCGRG00001003309) Ift80 (ENSCGRG00001016127) Trim59 (ENSCGRG00001007406) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473.i ENSGT00940000160473.j ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Northern American deer mouse MODERN SPECIES 19 Strit1 (ENSPEMG00000012153) Plch1 (ENSPEMG00000003317) E130311K13Rik (ENSPEMG00000024310) Slc33a1 (ENSPEMG00000011599) Gmps (ENSPEMG00000009799) Vmn2r1 (ENSPEMG00000000138) ENSPEMG00000005018 ENSPEMG00000003936 Kcnab1 (ENSPEMG00000020802) Ssr3 (ENSPEMG00000008767) Tiparp (ENSPEMG00000014866) ENSPEMG00000016123 ENSPEMG00000027465 Ccnl1 (ENSPEMG00000000691) Veph1 (ENSPEMG00000020957) Ptx3 (ENSPEMG00000029412) ##22 Shox2 (ENSPEMG00000024952) ENSPEMG00000010988 Mlf1 (ENSPEMG00000014175) Gfm1 (ENSPEMG00000008942) Lxn (ENSPEMG00000013211) Rarres1 (ENSPEMG00000020322) Mfsd1 (ENSPEMG00000022685) ENSPEMG00000027419 Schip1 (ENSPEMG00000022541) Il12a (ENSPEMG00000016462) 1110032F04Rik (ENSPEMG00000029770) Ift80 (ENSPEMG00000016207) Smc4 (ENSPEMG00000009281) Trim59 (ENSPEMG00000027017) Kpna4 (ENSPEMG00000021777) Prairie vole MODERN SPECIES Mme (ENSMOCG00000019325) ENSMOCG00000013919 ENSMOCG00000013101 Plch1 (ENSMOCG00000021300) E130311K13Rik (ENSMOCG00000022255) Slc33a1 (ENSMOCG00000015778) Gmps (ENSMOCG00000021456) Vmn2r1 (ENSMOCG00000016363) ENSMOCG00000018463 Kcnab1 (ENSMOCG00000006596) Ssr3 (ENSMOCG00000000580) Tiparp (ENSMOCG00000011217) ENSMOCG00000001595 Ccnl1 (ENSMOCG00000020951) Veph1 (ENSMOCG00000021347) Ptx3 (ENSMOCG00000022316) ##22 Shox2 (ENSMOCG00000018618) Rsrc1 (ENSMOCG00000021372) Mlf1 (ENSMOCG00000018934) Gfm1 (ENSMOCG00000000465) Lxn (ENSMOCG00000011862) Rarres1 (ENSMOCG00000016080) Mfsd1 (ENSMOCG00000007444) Schip1 (ENSMOCG00000005163) Il12a (ENSMOCG00000006247) ENSMOCG00000022387 1110032F04Rik (ENSMOCG00000008342) Ift80 (ENSMOCG00000011935) Smc4 (ENSMOCG00000020908) ENSMOCG00000019030 Kpna4 (ENSMOCG00000022257) Upper Galilee mountains blind mole rat MODERN SPECIES 991 Kcnab1 (ENSNGAG00000012290) Ssr3 (ENSNGAG00000001726) Tiparp (ENSNGAG00000024372) ENSNGAG00000014628 Ccnl1 (ENSNGAG00000017562) Veph1 (ENSNGAG00000023607) Ptx3 (ENSNGAG00000019190) ##22 Shox2 (ENSNGAG00000021490) Rsrc1 (ENSNGAG00000009486) Mlf1 (ENSNGAG00000005441) Gfm1 (ENSNGAG00000012375) Lxn (ENSNGAG00000023491) Rarres1 (ENSNGAG00000021830) Mfsd1 (ENSNGAG00000023897) Iqcj (ENSNGAG00000023171) Lesser Egyptian jerboa MODERN SPECIES 47 Kcnab1 (ENSJJAG00000018614) Ssr3 (ENSJJAG00000017278) Tiparp (ENSJJAG00000014369) ENSJJAG00000003128 ENSJJAG00000016465 ENSJJAG00000017620 ENSJJAG00000021019 Ccnl1 (ENSJJAG00000023702) ENSJJAG00000011566 Ptx3 (ENSJJAG00000022554) ##22 Veph1 (ENSJJAG00000014528) ENSJJAG00000016473 ENSJJAG00000014616 Shox2 (ENSJJAG00000014041) ENSJJAG00000013277 Rsrc1 (ENSJJAG00000013815) Mlf1 (ENSJJAG00000016680) Lxn (ENSJJAG00000013889) Gfm1 (ENSJJAG00000016447) Rarres1 (ENSJJAG00000020808) Mfsd1 (ENSJJAG00000018648) Iqcj (ENSJJAG00000011023) ENSJJAG00000019081 Il12a (ENSJJAG00000012071) 1110032F04Rik (ENSJJAG00000010657) Kangaroo rat MODERN SPECIES 349 Arhgef26 (ENSDORG00000004847) Dhx36 (ENSDORG00000004848) Mme (ENSDORG00000005785) Plch1 (ENSDORG00000009727) E130311K13Rik (ENSDORG00000023719) Slc33a1 (ENSDORG00000013954) Gmps (ENSDORG00000014996) ENSDORG00000001855 ENSDORG00000029512 Kcnab1 (ENSDORG00000000796) ENSDORG00000024089 Tiparp (ENSDORG00000013554) ENSDORG00000023530 Ccnl1 (ENSDORG00000008224) Veph1 (ENSDORG00000014560) Ptx3 (ENSDORG00000014563) ##22 Shox2 (ENSDORG00000006033) ENSDORG00000014162 Mlf1 (ENSDORG00000014164) Gfm1 (ENSDORG00000014165) Lxn (ENSDORG00000014168) ENSDORG00000026605 Mfsd1 (ENSDORG00000001805) Iqcj (ENSDORG00000028467) Schip1 (ENSDORG00000004328) ENSDORG00000026572 Ift80 (ENSDORG00000002083) Smc4 (ENSDORG00000002090) Trim59 (ENSDORG00000002094) Kpna4 (ENSDORG00000026803) Ppm1l (ENSDORG00000029270) Rodentia_A ANCESTRAL SPECIES 5 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Sciuridae ANCESTRAL SPECIES 26 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT01030000234590.A.b.b ENSGT01030000234590.A.b.a.b.a ENSGT01030000234590.A.b.a.b.b ENSGT00940000155866 ENSGT00390000015458 Marmotini ANCESTRAL SPECIES 25 ENSGT00940000156745 ENSGT01100000265011 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT01030000234590.A.b.b ENSGT01030000234590.A.b.a.b.a ENSGT01030000234590.A.b.a.b.b ENSGT00940000155866 ENSGT00390000015458 Marmotini_b ANCESTRAL SPECIES 46 ENSGT00390000003715 ENSGT00940000156745 ENSGT01100000265011 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT01030000234590.A.b.b ENSGT01030000234590.A.b.a.b.a ENSGT01030000234590.A.b.a.b.b ENSGT00940000155866 ENSGT00390000015458 Arctic ground squirrel MODERN SPECIES 111 ENSUPAG00010006817 PLCH1 (ENSUPAG00010006835) ENSUPAG00010007178 C3orf33 (ENSUPAG00010007194) SLC33A1 (ENSUPAG00010007214) GMPS (ENSUPAG00010007230) ENSUPAG00010007272 KCNAB1 (ENSUPAG00010007381) SSR3 (ENSUPAG00010007397) ENSUPAG00010007423 TIPARP (ENSUPAG00010007433) ENSUPAG00010007447 LEKR1 (ENSUPAG00010007452) CCNL1 (ENSUPAG00010007457) VEPH1 (ENSUPAG00010007462) PTX3 (ENSUPAG00010007477) ##22 SHOX2 (ENSUPAG00010007482) RSRC1 (ENSUPAG00010007492) MLF1 (ENSUPAG00010007820) GFM1 (ENSUPAG00010007852) LXN (ENSUPAG00010007947) RARRES1 (ENSUPAG00010007963) MFSD1 (ENSUPAG00010007976) ENSUPAG00010007997 Squirrel MODERN SPECIES 119 GPR149 (ENSSTOG00000003946) MME (ENSSTOG00000000081) ENSSTOG00000030767 PLCH1 (ENSSTOG00000000090) C3orf33 (ENSSTOG00000027383) SLC33A1 (ENSSTOG00000000095) GMPS (ENSSTOG00000026541) ENSSTOG00000011094 KCNAB1 (ENSSTOG00000025723) SSR3 (ENSSTOG00000013773) TIPARP (ENSSTOG00000027682) ENSSTOG00000031297 LEKR1 (ENSSTOG00000026813) CCNL1 (ENSSTOG00000011805) VEPH1 (ENSSTOG00000014695) PTX3 (ENSSTOG00000023681) ##22 SHOX2 (ENSSTOG00000010121) RSRC1 (ENSSTOG00000021591) ENSSTOG00000004812 MLF1 (ENSSTOG00000010142) GFM1 (ENSSTOG00000010150) LXN (ENSSTOG00000010168) RARRES1 (ENSSTOG00000010175) MFSD1 (ENSSTOG00000010188) ENSSTOG00000026854 ENSSTOG00000014607 IL12A (ENSSTOG00000014615) TM4SF4 (ENSSTOG00000010877) TM4SF1 (ENSSTOG00000025707) TM4SF18 (ENSSTOG00000026073) ENSSTOG00000002890 Alpin marmot MODERN SPECIES 19 PLCH1 (ENSMMMG00000015750) C3orf33 (ENSMMMG00000015801) SLC33A1 (ENSMMMG00000015806) ENSMMMG00000015821 GMPS (ENSMMMG00000015827) ENSMMMG00000015856 KCNAB1 (ENSMMMG00000015897) SSR3 (ENSMMMG00000015908) ENSMMMG00000015911 TIPARP (ENSMMMG00000015913) ENSMMMG00000015928 ENSMMMG00000015936 CCNL1 (ENSMMMG00000015946) ENSMMMG00000015953 VEPH1 (ENSMMMG00000015959) ENSMMMG00000015978 ##22 RSRC1 (ENSMMMG00000016000) MLF1 (ENSMMMG00000016176) GFM1 (ENSMMMG00000016194) LXN (ENSMMMG00000016210) RARRES1 (ENSMMMG00000016234) MFSD1 (ENSMMMG00000016249) ENSMMMG00000016261 ENSMMMG00000016266 SCHIP1 (ENSMMMG00000016272) IL12A (ENSMMMG00000016274) TM4SF4 (ENSMMMG00000016284) TM4SF1 (ENSMMMG00000016291) TM4SF18 (ENSMMMG00000016299) CP (ENSMMMG00000016360) HPS3 (ENSMMMG00000016598) Eurasian red squirrel MODERN SPECIES 1 ENSSVLG00005006949 MME (ENSSVLG00005006865) STRIT1 (ENSSVLG00005006829) PLCH1 (ENSSVLG00005006514) ENSSVLG00005006455 C3orf33 (ENSSVLG00005006407) SLC33A1 (ENSSVLG00005006332) GMPS (ENSSVLG00005006221) ENSSVLG00005006157 KCNAB1 (ENSSVLG00005005761) ENSSVLG00005005598 TIPARP (ENSSVLG00005005579) LEKR1 (ENSSVLG00005005558) CCNL1 (ENSSVLG00005005434) ENSSVLG00005005378 PTX3 (ENSSVLG00005005353) ##22 VEPH1 (ENSSVLG00005005203) SHOX2 (ENSSVLG00005005099) RSRC1 (ENSSVLG00005005040) MLF1 (ENSSVLG00005004886) LXN (ENSSVLG00005004800) GFM1 (ENSSVLG00005015861) RARRES1 (ENSSVLG00005015785) MFSD1 (ENSSVLG00005015449) ENSSVLG00005015377 ENSSVLG00005015250 ENSSVLG00005014764 IL12A (ENSSVLG00005014635) TM4SF4 (ENSSVLG00005014565) TM4SF1 (ENSSVLG00005014530) TM4SF18 (ENSSVLG00005014461) Hystricomorpha ANCESTRAL SPECIES 6 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499.b ENSGT00900000141094 ENSGT00940000160146.C Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000019192 SLC33A1 (ENSHGLG00000042989) ENSHGLG00000019482 ENSHGLG00000019405 ENSHGLG00000039018 KCNAB1 (ENSHGLG00000019332) SSR3 (ENSHGLG00000037144) ENSHGLG00000020605 ENSHGLG00000010960 ENSHGLG00000034810 ENSHGLG00000045711 ENSHGLG00000011740 ENSHGLG00000011933 ENSHGLG00000012347 ENSHGLG00000045178 PTX3 (ENSHGLG00000012461) ##22 ENSHGLG00000012178 ENSHGLG00000046633 ENSHGLG00000012718 SHOX2 (ENSHGLG00000012846) ENSHGLG00000018168 ENSHGLG00000044928 ENSHGLG00000039235 RSRC1 (ENSHGLG00000018148) MLF1 (ENSHGLG00000016829) ENSHGLG00000000559 LXN (ENSHGLG00000033224) GFM1 (ENSHGLG00000016855) RARRES1 (ENSHGLG00000049842) MFSD1 (ENSHGLG00000016907) ENSHGLG00000021053 Hystricomorpha_a ANCESTRAL SPECIES 4 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499.b ENSGT00900000141094 ENSGT00940000160146.C ENSGT01050000244891.C.c.a Guinea pig MODERN SPECIES 8 MME (ENSCPOG00000007994) STRIT1 (ENSCPOG00000037602) PLCH1 (ENSCPOG00000004751) ENSCPOG00000040284 C3orf33 (ENSCPOG00000035789) SLC33A1 (ENSCPOG00000005212) GMPS (ENSCPOG00000011574) ENSCPOG00000011335 ENSCPOG00000033396 KCNAB1 (ENSCPOG00000004890) SSR3 (ENSCPOG00000037065) TIPARP (ENSCPOG00000000345) ENSCPOG00000025111 ENSCPOG00000031670 VEPH1 (ENSCPOG00000010480) PTX3 (ENSCPOG00000037636) ##22 SHOX2 (ENSCPOG00000038435) RSRC1 (ENSCPOG00000000876) MLF1 (ENSCPOG00000000426) GFM1 (ENSCPOG00000001194) LXN (ENSCPOG00000001197) RARRES1 (ENSCPOG00000037396) MFSD1 (ENSCPOG00000015291) ENSCPOG00000015295 SCHIP1 (ENSCPOG00000003961) Il12a (ENSCPOG00000000016) ENSCPOG00000026743 SMC4 (ENSCPOG00000006130) TRIM59 (ENSCPOG00000006122) KPNA4 (ENSCPOG00000010671) ARL14 (ENSCPOG00000010678) Hystricomorpha_b ANCESTRAL SPECIES 9 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499.b ENSGT00900000141094 ENSGT00940000160146.C ENSGT01050000244891.C.c.a ENSGT00940000157030 Long-tailed chinchilla MODERN SPECIES 155 GPR149 (ENSCLAG00000004034) MME (ENSCLAG00000001839) ENSCLAG00000002045 PLCH1 (ENSCLAG00000002471) C3orf33 (ENSCLAG00000004358) SLC33A1 (ENSCLAG00000007266) GMPS (ENSCLAG00000007499) ENSCLAG00000012602 KCNAB1 (ENSCLAG00000012692) SSR3 (ENSCLAG00000002284) TIPARP (ENSCLAG00000002423) ENSCLAG00000002596 ENSCLAG00000002747 ENSCLAG00000002842 VEPH1 (ENSCLAG00000003443) PTX3 (ENSCLAG00000003570) ##22 SHOX2 (ENSCLAG00000003167) RSRC1 (ENSCLAG00000003542) MLF1 (ENSCLAG00000002260) GFM1 (ENSCLAG00000002503) LXN (ENSCLAG00000002640) RARRES1 (ENSCLAG00000002310) MFSD1 (ENSCLAG00000002835) ENSCLAG00000003229 ENSCLAG00000004456 IFT80 (ENSCLAG00000004781) SMC4 (ENSCLAG00000002256) TRIM59 (ENSCLAG00000017476) KPNA4 (ENSCLAG00000002716) PPM1L (ENSCLAG00000002821) B3GALNT1 (ENSCLAG00000002991) Degu MODERN SPECIES 156 ENSODEG00000004144 ENSODEG00000019143 SLC33A1 (ENSODEG00000004913) GMPS (ENSODEG00000005062) ENSODEG00000005195 ENSODEG00000005266 ENSODEG00000006147 KCNAB1 (ENSODEG00000006185) SSR3 (ENSODEG00000006236) TIPARP (ENSODEG00000003454) ENSODEG00000003611 CCNL1 (ENSODEG00000003645) ENSODEG00000019034 ENSODEG00000003686 VEPH1 (ENSODEG00000003728) PTX3 (ENSODEG00000003883) ##22 SHOX2 (ENSODEG00000003934) RSRC1 (ENSODEG00000003974) MLF1 (ENSODEG00000004264) ENSODEG00000004275 GFM1 (ENSODEG00000004316) LXN (ENSODEG00000004470) RARRES1 (ENSODEG00000004496) ENSODEG00000003386 MFSD1 (ENSODEG00000003463) ENSODEG00000003705 ENSODEG00000003766 ENSODEG00000003786 IQCJ (ENSODEG00000003870) ENSODEG00000019016 ENSODEG00000004394 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Eulipotyphla ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.a ##22 Hedgehog MODERN SPECIES 16297 ENSEEUG00000007561 ##22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Suina ANCESTRAL SPECIES 1 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Chacoan peccary MODERN SPECIES 944 DHX36 (ENSCWAG00000019200) GPR149 (ENSCWAG00000019481) MME (ENSCWAG00000019525) STRIT1 (ENSCWAG00000019605) ENSCWAG00000019615 PLCH1 (ENSCWAG00000019684) C3orf33 (ENSCWAG00000020351) SLC33A1 (ENSCWAG00000020377) GMPS (ENSCWAG00000020402) KCNAB1 (ENSCWAG00000020534) SSR3 (ENSCWAG00000021071) TIPARP (ENSCWAG00000021084) LEKR1 (ENSCWAG00000021096) CCNL1 (ENSCWAG00000021119) VEPH1 (ENSCWAG00000021141) PTX3 (ENSCWAG00000021153) ##22 SHOX2 (ENSCWAG00000021164) RSRC1 (ENSCWAG00000004465) MLF1 (ENSCWAG00000004549) GFM1 (ENSCWAG00000005248) LXN (ENSCWAG00000005330) RARRES1 (ENSCWAG00000005368) ENSCWAG00000005382 MFSD1 (ENSCWAG00000005417) ENSCWAG00000005569 IQCJ (ENSCWAG00000005599) ENSCWAG00000005648 IL12A (ENSCWAG00000005770) C3orf80 (ENSCWAG00000005889) IFT80 (ENSCWAG00000005901) ENSCWAG00000006029 Pig MODERN SPECIES 4 DHX36 (ENSSSCG00000024916) GPR149 (ENSSSCG00000023582) MME (ENSSSCG00000011723) STRIT1 (ENSSSCG00000057007) PLCH1 (ENSSSCG00000026718) SLC33A1 (ENSSSCG00000025316) GMPS (ENSSSCG00000028855) ENSSSCG00000011724 KCNAB1 (ENSSSCG00000025810) ENSSSCG00000047110 SSR3 (ENSSSCG00000030567) TIPARP (ENSSSCG00000027646) LEKR1 (ENSSSCG00000026579) CCNL1 (ENSSSCG00000029352) VEPH1 (ENSSSCG00000011726) PTX3 (ENSSSCG00000011727) ##22 SHOX2 (ENSSSCG00000025238) RSRC1 (ENSSSCG00000027556) MLF1 (ENSSSCG00000059095) ENSSSCG00000047511 GFM1 (ENSSSCG00000025651) LXN (ENSSSCG00000020984) RARRES1 (ENSSSCG00000028623) MFSD1 (ENSSSCG00000026018) ENSSSCG00000022054 IQCJ (ENSSSCG00000011728) ENSSSCG00000011729 ENSSSCG00000059448 IL12A (ENSSSCG00000011730) C3orf80 (ENSSSCG00000035935) IFT80 (ENSSSCG00000011733) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Cetacea ANCESTRAL SPECIES 10 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00730000111029.h ENSGT00940000156760 ENSGT00940000154586.g.a ENSGT00390000000970.b.f ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000172218 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00940000154586.g.a ENSGT00390000000970.b.f ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000165902 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000172218 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00940000154586.g.a ENSGT00390000000970.b.f ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000165902 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Dolphin MODERN SPECIES 2587 VEPH1 (ENSTTRG00000014612) PTX3 (ENSTTRG00000014615) ##22 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000172218 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00940000154586.g.a ENSGT00390000000970.b.f ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000165902 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Monodontidae ANCESTRAL SPECIES 23 ENSGT00550000075103.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000172218 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b.f ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Narwhal MODERN SPECIES 297 ENSMMNG00015003103 MME (ENSMMNG00015003033) STRIT1 (ENSMMNG00015002983) ENSMMNG00015002967 ENSMMNG00015002948 PLCH1 (ENSMMNG00015002782) C3orf33 (ENSMMNG00015002700) SLC33A1 (ENSMMNG00015002672) GMPS (ENSMMNG00015002623) ENSMMNG00015002576 KCNAB1 (ENSMMNG00015002282) ENSMMNG00015002141 TIPARP (ENSMMNG00015002122) LEKR1 (ENSMMNG00015002068) CCNL1 (ENSMMNG00015002007) PTX3 (ENSMMNG00015001964) ##22 VEPH1 (ENSMMNG00015001888) SHOX2 (ENSMMNG00015001781) RSRC1 (ENSMMNG00015001723) MLF1 (ENSMMNG00015001539) GFM1 (ENSMMNG00015001384) ENSMMNG00015001295 MFSD1 (ENSMMNG00015001202) IQCJ (ENSMMNG00015001145) ENSMMNG00015001033 IL12A (ENSMMNG00015000911) ENSMMNG00015000856 C3orf80 (ENSMMNG00015000836) IFT80 (ENSMMNG00015000800) SMC4 (ENSMMNG00015000670) TRIM59 (ENSMMNG00015000625) Beluga whale MODERN SPECIES 111 ENSDLEG00000011673 ENSDLEG00000011623 ENSDLEG00000011607 PLCH1 (ENSDLEG00000011538) SLC33A1 (ENSDLEG00000011505) GMPS (ENSDLEG00000011386) KCNAB1 (ENSDLEG00000011333) SSR3 (ENSDLEG00000011325) TIPARP (ENSDLEG00000011316) ENSDLEG00000011306 ENSDLEG00000011300 ENSDLEG00000011286 CCNL1 (ENSDLEG00000011260) PTX3 (ENSDLEG00000011229) ##22 VEPH1 (ENSDLEG00000011200) SHOX2 (ENSDLEG00000011172) ENSDLEG00000011145 MLF1 (ENSDLEG00000011124) LXN (ENSDLEG00000011104) GFM1 (ENSDLEG00000011079) RARRES1 (ENSDLEG00000011063) MFSD1 (ENSDLEG00000010979) IQCJ (ENSDLEG00000010968) ENSDLEG00000010942 IL12A (ENSDLEG00000010922) ENSDLEG00000010905 C3orf80 (ENSDLEG00000010897) IFT80 (ENSDLEG00000010858) SMC4 (ENSDLEG00000010806) Vaquita MODERN SPECIES 15 STRIT1 (ENSPSNG00000018071) PLCH1 (ENSPSNG00000018233) ENSPSNG00000018941 C3orf33 (ENSPSNG00000018983) SLC33A1 (ENSPSNG00000019036) GMPS (ENSPSNG00000019139) ENSPSNG00000019296 KCNAB1 (ENSPSNG00000019449) ENSPSNG00000000110 SSR3 (ENSPSNG00000000147) TIPARP (ENSPSNG00000000170) LEKR1 (ENSPSNG00000000223) ENSPSNG00000000259 CCNL1 (ENSPSNG00000000286) VEPH1 (ENSPSNG00000000364) PTX3 (ENSPSNG00000000445) ##22 ENSPSNG00000000457 SHOX2 (ENSPSNG00000000501) RSRC1 (ENSPSNG00000000561) MLF1 (ENSPSNG00000000637) GFM1 (ENSPSNG00000000706) LXN (ENSPSNG00000000748) RARRES1 (ENSPSNG00000000775) MFSD1 (ENSPSNG00000000817) IQCJ (ENSPSNG00000000860) ENSPSNG00000000914 IL12A (ENSPSNG00000001025) C3orf80 (ENSPSNG00000001048) IFT80 (ENSPSNG00000001070) SMC4 (ENSPSNG00000001142) TRIM59 (ENSPSNG00000001252) Sperm whale MODERN SPECIES PLCH1 (ENSPCTG00005002793) ENSPCTG00005002938 C1H3orf33 (ENSPCTG00005002945) SLC33A1 (ENSPCTG00005002962) GMPS (ENSPCTG00005003000) ENSPCTG00005003035 ENSPCTG00005003068 KCNAB1 (ENSPCTG00005003144) ENSPCTG00005003569 SSR3 (ENSPCTG00005003579) TIPARP (ENSPCTG00005003592) LEKR1 (ENSPCTG00005003617) ENSPCTG00005003638 CCNL1 (ENSPCTG00005003663) VEPH1 (ENSPCTG00005003733) PTX3 (ENSPCTG00005003765) ##22 ENSPCTG00005003773 SHOX2 (ENSPCTG00005003800) RSRC1 (ENSPCTG00005003830) MLF1 (ENSPCTG00005003880) GFM1 (ENSPCTG00005003953) LXN (ENSPCTG00005003994) LXN (ENSPCTG00005004011) MFSD1 (ENSPCTG00005004030) IQCJ (ENSPCTG00005004063) ENSPCTG00005004096 IL12A (ENSPCTG00005004147) ENSPCTG00005004164 ENSPCTG00005004183 C1H3orf80 (ENSPCTG00005004196) IFT80 (ENSPCTG00005000214) Blue whale MODERN SPECIES 15 STRIT1 (ENSBMSG00010002387) PLCH1 (ENSBMSG00010002496) ENSBMSG00010003115 C3orf33 (ENSBMSG00010003125) SLC33A1 (ENSBMSG00010003142) GMPS (ENSBMSG00010003175) ENSBMSG00010003213 ENSBMSG00010003257 KCNAB1 (ENSBMSG00010003309) ENSBMSG00010003383 ENSBMSG00010003398 TIPARP (ENSBMSG00010003410) LEKR1 (ENSBMSG00010003429) CCNL1 (ENSBMSG00010003451) VEPH1 (ENSBMSG00010003516) PTX3 (ENSBMSG00010003568) ##22 ENSBMSG00010003577 SHOX2 (ENSBMSG00010003594) RSRC1 (ENSBMSG00010003618) ENSBMSG00010003662 GFM1 (ENSBMSG00010003975) LXN (ENSBMSG00010003995) RARRES1 (ENSBMSG00010004015) ENSBMSG00010004038 ENSBMSG00010004091 ENSBMSG00010004107 IQCJ (ENSBMSG00010004126) ENSBMSG00010004177 IL12A (ENSBMSG00010004549) ENSBMSG00010004653 ENSBMSG00010004671 Pecora ANCESTRAL SPECIES 8 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Percora_a ANCESTRAL SPECIES 7 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Bovidae ANCESTRAL SPECIES 9 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Caprinae ANCESTRAL SPECIES 8 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00950000182995.e.a.a.a.fb.a.b ENSGT00940000156760 ENSGT00390000000970.b.g ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Rambouillet Sheep MODERN SPECIES DHX36 (ENSOARG00020002569) GPR149 (ENSOARG00020002480) MME (ENSOARG00020002391) STRIT1 (ENSOARG00020002364) PLCH1 (ENSOARG00020002177) C3orf33 (ENSOARG00020002111) SLC33A1 (ENSOARG00020002067) GMPS (ENSOARG00020001873) ENSOARG00020001823 KCNAB1 (ENSOARG00020001172) SSR3 (ENSOARG00020001079) TIPARP (ENSOARG00020001069) ENSOARG00020001059 LEKR1 (ENSOARG00020001026) CCNL1 (ENSOARG00020000976) PTX3 (ENSOARG00020000946) ##22 VEPH1 (ENSOARG00020000860) SHOX2 (ENSOARG00020000755) RSRC1 (ENSOARG00020000715) MLF1 (ENSOARG00020000362) LXN (ENSOARG00020000302) GFM1 (ENSOARG00020000197) RARRES1 (ENSOARG00020000163) ENSOARG00020006018 MFSD1 (ENSOARG00020005861) ENSOARG00020005844 ENSOARG00020005692 IL12A (ENSOARG00020005615) C3orf80 (ENSOARG00020005601) ENSOARG00020005593 IFT80 (ENSOARG00020005544) Goat MODERN SPECIES ENSCHIG00000017243 MME (ENSCHIG00000018324) PLCH1 (ENSCHIG00000024716) ENSCHIG00000011194 C3orf33 (ENSCHIG00000025795) SLC33A1 (ENSCHIG00000013645) GMPS (ENSCHIG00000022844) ENSCHIG00000020039 ENSCHIG00000025482 KCNAB1 (ENSCHIG00000023684) SSR3 (ENSCHIG00000012338) TIPARP (ENSCHIG00000018721) ENSCHIG00000023809 ENSCHIG00000010147 CCNL1 (ENSCHIG00000015405) PTX3 (ENSCHIG00000012523) ##22 VEPH1 (ENSCHIG00000027071) SHOX2 (ENSCHIG00000016128) ENSCHIG00000011968 MLF1 (ENSCHIG00000018923) LXN (ENSCHIG00000026258) GFM1 (ENSCHIG00000015220) RARRES1 (ENSCHIG00000020798) MFSD1 (ENSCHIG00000025210) ENSCHIG00000014424 IQCJ (ENSCHIG00000021729) SCHIP1 (ENSCHIG00000004169) ENSCHIG00000018805 IL12A (ENSCHIG00000022793) ENSCHIG00000009835 ENSCHIG00000021362 Bovinae ANCESTRAL SPECIES 6 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Bos ANCESTRAL SPECIES 7 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT01080000259023 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Bos_a ANCESTRAL SPECIES 5 ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 ENSGT00940000166505 ENSGT01080000259023 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 Domestic yak MODERN SPECIES MME (ENSBGRG00000009643) STRIT1 (ENSBGRG00000009547) ENSBGRG00000009536 PLCH1 (ENSBGRG00000007957) C3orf33 (ENSBGRG00000007709) ENSBGRG00000007689 SLC33A1 (ENSBGRG00000007545) GMPS (ENSBGRG00000007144) ENSBGRG00000017938 KCNAB1 (ENSBGRG00000017121) SSR3 (ENSBGRG00000016835) TIPARP (ENSBGRG00000016750) ENSBGRG00000016728 LEKR1 (ENSBGRG00000016645) CCNL1 (ENSBGRG00000016437) PTX3 (ENSBGRG00000016322) ##22 VEPH1 (ENSBGRG00000016007) SHOX2 (ENSBGRG00000015647) ENSBGRG00000015623 RSRC1 (ENSBGRG00000015425) MLF1 (ENSBGRG00000014908) LXN (ENSBGRG00000014790) GFM1 (ENSBGRG00000014469) RARRES1 (ENSBGRG00000014425) MFSD1 (ENSBGRG00000014081) ENSBGRG00000014047 ENSBGRG00000014031 ENSBGRG00000013519 IL12A (ENSBGRG00000013416) ENSBGRG00000013199 C3orf80 (ENSBGRG00000013162) Wild yak MODERN SPECIES 2397 VEPH1 (ENSBMUG00000011199) PTX3 (ENSBMUG00000011240) ##22 Bos_b ANCESTRAL SPECIES 5 ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 ENSGT01080000259023 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Cow MODERN SPECIES ARHGEF26 (ENSBTAG00000013439) DHX36 (ENSBTAG00000006142) GPR149 (ENSBTAG00000006147) ENSBTAG00000024623 MME (ENSBTAG00000002075) PLCH1 (ENSBTAG00000008307) C1H3orf33 (ENSBTAG00000005203) SLC33A1 (ENSBTAG00000014318) GMPS (ENSBTAG00000013013) KCNAB1 (ENSBTAG00000018465) SSR3 (ENSBTAG00000018471) TIPARP (ENSBTAG00000012120) ENSBTAG00000050129 ENSBTAG00000018009 CCNL1 (ENSBTAG00000003851) PTX3 (ENSBTAG00000009012) ##22 VEPH1 (ENSBTAG00000024643) SHOX2 (ENSBTAG00000005230) RSRC1 (ENSBTAG00000031561) MLF1 (ENSBTAG00000004126) LXN (ENSBTAG00000009336) GFM1 (ENSBTAG00000027795) RARRES1 (ENSBTAG00000014713) MFSD1 (ENSBTAG00000009263) ENSBTAG00000038395 IQCJ (ENSBTAG00000003135) SCHIP1 (ENSBTAG00000014960) IL12A (ENSBTAG00000015150) ENSBTAG00000052570 C1H3orf80 (ENSBTAG00000047247) IFT80 (ENSBTAG00000031572) Hybrid Bos Indicus MODERN SPECIES MME (ENSBIXG00005010777) ENSBIXG00005010857 PLCH1 (ENSBIXG00005011013) C3orf33 (ENSBIXG00005001018) SLC33A1 (ENSBIXG00005011151) ENSBIXG00005011169 GMPS (ENSBIXG00005011224) ENSBIXG00005011267 KCNAB1 (ENSBIXG00005011415) SSR3 (ENSBIXG00005001116) ENSBIXG00005001118 TIPARP (ENSBIXG00005011554) LEKR1 (ENSBIXG00005011662) CCNL1 (ENSBIXG00005011760) ENSBIXG00005011803 PTX3 (ENSBIXG00005011820) ##22 VEPH1 (ENSBIXG00005011960) SHOX2 (ENSBIXG00005012090) ENSBIXG00005012116 ENSBIXG00005012125 RSRC1 (ENSBIXG00005012173) MLF1 (ENSBIXG00005012285) LXN (ENSBIXG00005000391) GFM1 (ENSBIXG00005012325) RARRES1 (ENSBIXG00005012340) MFSD1 (ENSBIXG00005001318) ENSBIXG00005012384 ENSBIXG00005012400 ENSBIXG00005012541 IL12A (ENSBIXG00005001392) ENSBIXG00005012707 American bison MODERN SPECIES 3059 BMERB1 (ENSBBBG00000015983) MPV17L (ENSBBBG00000016011) PDXDC1 (ENSBBBG00000016102) NTAN1 (ENSBBBG00000016129) RRN3 (ENSBBBG00000016180) ENSBBBG00000007260 ENSBBBG00000016195 PLA2G10 (ENSBBBG00000016218) BFAR (ENSBBBG00000016242) ENSBBBG00000016268 KCNAB1 (ENSBBBG00000016370) SSR3 (ENSBBBG00000016407) TIPARP (ENSBBBG00000016433) LEKR1 (ENSBBBG00000016473) CCNL1 (ENSBBBG00000007697) PTX3 (ENSBBBG00000016521) ##22 VEPH1 (ENSBBBG00000000755) SHOX2 (ENSBBBG00000004093) RSRC1 (ENSBBBG00000016710) MLF1 (ENSBBBG00000016820) ENSBBBG00000016835 GFM1 (ENSBBBG00000016884) RARRES1 (ENSBBBG00000007038) MFSD1 (ENSBBBG00000016915) ENSBBBG00000016927 IQCJ (ENSBBBG00000006892) SCHIP1 (ENSBBBG00000017002) IL12A (ENSBBBG00000017024) C3orf80 (ENSBBBG00000004213) IFT80 (ENSBBBG00000017101) SMC4 (ENSBBBG00000017274) Siberian musk deer MODERN SPECIES 1182 ENSMMSG00000011343 CCNL1 (ENSMMSG00000011205) ENSMMSG00000011178 PTX3 (ENSMMSG00000011155) ##22 VEPH1 (ENSMMSG00000011108) SHOX2 (ENSMMSG00000011069) RSRC1 (ENSMMSG00000011042) MLF1 (ENSMMSG00000010771) LXN (ENSMMSG00000010700) GFM1 (ENSMMSG00000010573) RARRES1 (ENSMMSG00000010545) MFSD1 (ENSMMSG00000010205) ENSMMSG00000010154 IQCJ (ENSMMSG00000010113) ENSMMSG00000009957 IL12A (ENSMMSG00000009883) ENSMMSG00000009838 C3orf80 (ENSMMSG00000009824) IFT80 (ENSMMSG00000009699) Yarkand deer MODERN SPECIES 10 ARHGEF26 (ENSCHYG00000007452) DHX36 (ENSCHYG00000007110) GPR149 (ENSCHYG00000007062) MME (ENSCHYG00000006865) ENSCHYG00000006823 PLCH1 (ENSCHYG00000006524) C3orf33 (ENSCHYG00000006450) SLC33A1 (ENSCHYG00000006374) ENSCHYG00000006350 GMPS (ENSCHYG00000006185) KCNAB1 (ENSCHYG00000005549) SSR3 (ENSCHYG00000005427) TIPARP (ENSCHYG00000005381) LEKR1 (ENSCHYG00000005267) CCNL1 (ENSCHYG00000005169) PTX3 (ENSCHYG00000019896) ##22 VEPH1 (ENSCHYG00000019688) SHOX2 (ENSCHYG00000019538) RSRC1 (ENSCHYG00000019368) MLF1 (ENSCHYG00000018977) GFM1 (ENSCHYG00000018556) RARRES1 (ENSCHYG00000018389) MFSD1 (ENSCHYG00000017875) ENSCHYG00000017805 IQCJ (ENSCHYG00000017742) ENSCHYG00000017273 IL12A (ENSCHYG00000017138) ENSCHYG00000016946 ENSCHYG00000016898 C3orf80 (ENSCHYG00000016866) IFT80 (ENSCHYG00000016614) Camelidae ANCESTRAL SPECIES ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00440000033499 Arabian camel MODERN SPECIES ARHGEF26 (ENSCDRG00005000067) DHX36 (ENSCDRG00005000096) GPR149 (ENSCDRG00005000230) MME (ENSCDRG00005000270) STRIT1 (ENSCDRG00005000324) PLCH1 (ENSCDRG00005000373) C3orf33 (ENSCDRG00005000461) SLC33A1 (ENSCDRG00005000479) GMPS (ENSCDRG00005000518) KCNAB1 (ENSCDRG00005000711) SSR3 (ENSCDRG00005001758) TIPARP (ENSCDRG00005001771) LEKR1 (ENSCDRG00005001799) CCNL1 (ENSCDRG00005001866) VEPH1 (ENSCDRG00005001946) PTX3 (ENSCDRG00005002009) ##22 ENSCDRG00005002025 SHOX2 (ENSCDRG00005002041) RSRC1 (ENSCDRG00005002140) MLF1 (ENSCDRG00005002182) GFM1 (ENSCDRG00005002271) LXN (ENSCDRG00005002303) RARRES1 (ENSCDRG00005002318) MFSD1 (ENSCDRG00005002341) ENSCDRG00005002572 IQCJ (ENSCDRG00005002586) ENSCDRG00005002633 IL12A (ENSCDRG00005002981) ENSCDRG00005003063 ENSCDRG00005003086 IFT80 (ENSCDRG00005003106) Alpaca MODERN SPECIES 2648 VEPH1 (ENSVPAG00000010429) PTX3 (ENSVPAG00000010431) ##22 RSRC1 (ENSVPAG00000010432) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Equus ANCESTRAL SPECIES 78 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b.e ENSGT00530000063813.a ENSGT00390000011700.d Donkey MODERN SPECIES 25 TRIM59 (ENSEASG00005034852) SMC4 (ENSEASG00005019735) IFT80 (ENSEASG00005019604) C3orf80 (ENSEASG00005019594) ENSEASG00005019592 IL12A (ENSEASG00005019588) ENSEASG00005019584 IQCJ (ENSEASG00005033866) ENSEASG00005019578 ENSEASG00005012411 ENSEASG00005026558 TIPARP (ENSEASG00005012401) LEKR1 (ENSEASG00005012389) CCNL1 (ENSEASG00005012383) VEPH1 (ENSEASG00005012366) PTX3 (ENSEASG00005026603) ##22 SHOX2 (ENSEASG00005012352) RSRC1 (ENSEASG00005030784) MLF1 (ENSEASG00005012340) GFM1 (ENSEASG00005029932) LXN (ENSEASG00005028111) RARRES1 (ENSEASG00005033961) ENSEASG00005026105 ENSEASG00005018669 ENSEASG00005037509 ENSEASG00005026850 NMD3 (ENSEASG00005018672) SPTSSB (ENSEASG00005029208) OTOL1 (ENSEASG00005018674) ENSEASG00005018675 SI (ENSEASG00005020052) Horse MODERN SPECIES 10 KCNAB1 (ENSECAG00000006802) ENSECAG00000059269 SSR3 (ENSECAG00000023239) TIPARP (ENSECAG00000024048) ENSECAG00000045368 ENSECAG00000006496 CCNL1 (ENSECAG00000008851) VEPH1 (ENSECAG00000010484) PTX3 (ENSECAG00000038866) ##22 SHOX2 (ENSECAG00000015571) RSRC1 (ENSECAG00000032191) MLF1 (ENSECAG00000016503) ENSECAG00000051675 ENSECAG00000052824 ENSECAG00000045693 ENSECAG00000059152 ENSECAG00000050043 ENSECAG00000044078 ENSECAG00000059240 ENSECAG00000045896 ARL14 (ENSECAG00000007772) ENSECAG00000056203 KPNA4 (ENSECAG00000023235) TRIM59 (ENSECAG00000007762) Chiroptera ANCESTRAL SPECIES 13 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Megabat MODERN SPECIES 3079 VEPH1 (ENSPVAG00000014534) PTX3 (ENSPVAG00000014535) ##22 Microchiroptera ANCESTRAL SPECIES 11 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Microbat MODERN SPECIES 1007 DHX36 (ENSMLUG00000002318) GPR149 (ENSMLUG00000012000) MME (ENSMLUG00000014941) ENSMLUG00000027166 ENSMLUG00000005520 C3orf33 (ENSMLUG00000026622) SLC33A1 (ENSMLUG00000001019) ENSMLUG00000024763 GMPS (ENSMLUG00000015442) KCNAB1 (ENSMLUG00000015462) SSR3 (ENSMLUG00000015478) ENSMLUG00000009885 TIPARP (ENSMLUG00000006995) LEKR1 (ENSMLUG00000012119) CCNL1 (ENSMLUG00000015049) PTX3 (ENSMLUG00000000487) ##22 VEPH1 (ENSMLUG00000000477) SHOX2 (ENSMLUG00000024898) MLF1 (ENSMLUG00000000447) LXN (ENSMLUG00000000462) GFM1 (ENSMLUG00000000452) RARRES1 (ENSMLUG00000000467) MFSD1 (ENSMLUG00000001574) ENSMLUG00000016328 IQCJ (ENSMLUG00000029191) SCHIP1 (ENSMLUG00000028779) IL12A (ENSMLUG00000014101) ENSMLUG00000028009 ENSMLUG00000025073 Greater horseshoe bat MODERN SPECIES 11 RAP2B (ENSRFEG00010005627) ARHGEF26 (ENSRFEG00010005586) DHX36 (ENSRFEG00010005520) GPR149 (ENSRFEG00010005464) MME (ENSRFEG00010005413) STRIT1 (ENSRFEG00010005386) PLCH1 (ENSRFEG00010005294) SLC33A1 (ENSRFEG00010005239) GMPS (ENSRFEG00010005175) ENSRFEG00010005149 KCNAB1 (ENSRFEG00010005060) SSR3 (ENSRFEG00010005041) TIPARP (ENSRFEG00010005035) LEKR1 (ENSRFEG00010005022) CCNL1 (ENSRFEG00010004998) PTX3 (ENSRFEG00010004987) ##22 VEPH1 (ENSRFEG00010004933) SHOX2 (ENSRFEG00010003974) RSRC1 (ENSRFEG00010003927) MLF1 (ENSRFEG00010003832) LXN (ENSRFEG00010003785) GFM1 (ENSRFEG00010003742) RARRES1 (ENSRFEG00010003709) MFSD1 (ENSRFEG00010003647) ENSRFEG00010003605 ENSRFEG00010003578 IQCJ (ENSRFEG00010003545) ENSRFEG00010003468 IL12A (ENSRFEG00010003390) ENSRFEG00010003324 C3orf80 (ENSRFEG00010003281) Carnivora ANCESTRAL SPECIES 10 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 Felidae ANCESTRAL SPECIES 9 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Panthera ANCESTRAL SPECIES 12 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 Tiger MODERN SPECIES 242 P2RY1 (ENSPTIG00000002203) ARHGEF26 (ENSPTIG00000021954) DHX36 (ENSPTIG00000018478) GPR149 (ENSPTIG00000017502) MME (ENSPTIG00000016196) STRIT1 (ENSPTIG00000010401) PLCH1 (ENSPTIG00000015618) C3orf33 (ENSPTIG00000014993) SLC33A1 (ENSPTIG00000014526) GMPS (ENSPTIG00000012623) KCNAB1 (ENSPTIG00000018164) SSR3 (ENSPTIG00000016314) TIPARP (ENSPTIG00000014258) LEKR1 (ENSPTIG00000013039) CCNL1 (ENSPTIG00000011507) PTX3 (ENSPTIG00000011127) ##22 VEPH1 (ENSPTIG00000007873) ENSPTIG00000007545 SHOX2 (ENSPTIG00000002610) RSRC1 (ENSPTIG00000017358) MLF1 (ENSPTIG00000014178) LXN (ENSPTIG00000013811) GFM1 (ENSPTIG00000012416) RARRES1 (ENSPTIG00000012044) MFSD1 (ENSPTIG00000004131) IQCJ (ENSPTIG00000000535) ENSPTIG00000021983 SCHIP1 (ENSPTIG00000021584) IL12A (ENSPTIG00000019184) IFT80 (ENSPTIG00000017853) SMC4 (ENSPTIG00000009501) Panthera_a ANCESTRAL SPECIES 17 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000167272 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 leopard MODERN SPECIES 5 ARHGEF26 (ENSPPRG00000003558) DHX36 (ENSPPRG00000002879) GPR149 (ENSPPRG00000023313) MME (ENSPPRG00000023388) STRIT1 (ENSPPRG00000023798) PLCH1 (ENSPPRG00000023905) C3orf33 (ENSPPRG00000024803) SLC33A1 (ENSPPRG00000024861) GMPS (ENSPPRG00000024889) KCNAB1 (ENSPPRG00000024997) SSR3 (ENSPPRG00000018310) TIPARP (ENSPPRG00000017076) LEKR1 (ENSPPRG00000016442) CCNL1 (ENSPPRG00000015223) VEPH1 (ENSPPRG00000014553) PTX3 (ENSPPRG00000013280) ##22 ENSPPRG00000013159 SHOX2 (ENSPPRG00000012987) RSRC1 (ENSPPRG00000012590) ENSPPRG00000010610 MLF1 (ENSPPRG00000010057) GFM1 (ENSPPRG00000009281) LXN (ENSPPRG00000008785) RARRES1 (ENSPPRG00000008712) MFSD1 (ENSPPRG00000008502) IQCJ (ENSPPRG00000007765) ENSPPRG00000007336 ENSPPRG00000006249 IL12A (ENSPPRG00000005897) ENSPPRG00000005383 C3orf80 (ENSPPRG00000021909) lion MODERN SPECIES 9 ARHGEF26 (ENSPLOG00000009339) DHX36 (ENSPLOG00000009521) GPR149 (ENSPLOG00000009781) MME (ENSPLOG00000009835) STRIT1 (ENSPLOG00000009947) PLCH1 (ENSPLOG00000010097) C3orf33 (ENSPLOG00000010806) SLC33A1 (ENSPLOG00000010862) GMPS (ENSPLOG00000010967) KCNAB1 (ENSPLOG00000011367) SSR3 (ENSPLOG00000012356) TIPARP (ENSPLOG00000012424) LEKR1 (ENSPLOG00000012490) CCNL1 (ENSPLOG00000012698) VEPH1 (ENSPLOG00000012921) PTX3 (ENSPLOG00000013109) ##22 SHOX2 (ENSPLOG00000013339) RSRC1 (ENSPLOG00000013528) ENSPLOG00000013628 MLF1 (ENSPLOG00000013649) GFM1 (ENSPLOG00000013707) LXN (ENSPLOG00000013849) RARRES1 (ENSPLOG00000014023) MFSD1 (ENSPLOG00000014116) ENSPLOG00000014403 IQCJ (ENSPLOG00000014473) ENSPLOG00000014648 ENSPLOG00000015276 IL12A (ENSPLOG00000015377) ENSPLOG00000015446 C3orf80 (ENSPLOG00000015469) Cat MODERN SPECIES 240 ARHGEF26 (ENSFCAG00000028110) DHX36 (ENSFCAG00000004860) GPR149 (ENSFCAG00000004861) MME (ENSFCAG00000004615) STRIT1 (ENSFCAG00000046459) PLCH1 (ENSFCAG00000012834) CC2H3orf33 (ENSFCAG00000044100) SLC33A1 (ENSFCAG00000027140) GMPS (ENSFCAG00000025327) KCNAB1 (ENSFCAG00000005945) SSR3 (ENSFCAG00000028606) TIPARP (ENSFCAG00000013314) LEKR1 (ENSFCAG00000025717) CCNL1 (ENSFCAG00000005138) ENSFCAG00000047506 PTX3 (ENSFCAG00000003464) ##22 VEPH1 (ENSFCAG00000015589) SHOX2 (ENSFCAG00000037357) ENSFCAG00000051036 RSRC1 (ENSFCAG00000013290) MLF1 (ENSFCAG00000022176) LXN (ENSFCAG00000013292) GFM1 (ENSFCAG00000013291) ENSFCAG00000053294 RARRES1 (ENSFCAG00000046780) MFSD1 (ENSFCAG00000025464) ENSFCAG00000007832 ENSFCAG00000035937 ENSFCAG00000026679 IL12A (ENSFCAG00000011130) ENSFCAG00000047334 Caniformia ANCESTRAL SPECIES ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00720000110080 ENSGT00390000005823 Canidae ANCESTRAL SPECIES 24 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.a.a ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00550000074851 ENSGT00940000159619.a Canis_lupus ANCESTRAL SPECIES 27 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.a.a ENSGT00390000000970.a.b.a ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00550000074851 ENSGT00940000159619.a Dog MODERN SPECIES 15 DHX36 (ENSCAFG00845020573) GPR149 (ENSCAFG00845020850) MME (ENSCAFG00845020957) STRIT1 (ENSCAFG00845021186) PLCH1 (ENSCAFG00845021263) ENSCAFG00845021471 C3orf33 (ENSCAFG00845021566) SLC33A1 (ENSCAFG00845021734) GMPS (ENSCAFG00845021930) KCNAB1 (ENSCAFG00845022469) ENSCAFG00845023016 TIPARP (ENSCAFG00845023055) LEKR1 (ENSCAFG00845023191) CCNL1 (ENSCAFG00845023534) VEPH1 (ENSCAFG00845023758) ENSCAFG00845024115 ##22 SHOX2 (ENSCAFG00845024168) RSRC1 (ENSCAFG00845024332) MLF1 (ENSCAFG00845024615) GFM1 (ENSCAFG00845024782) LXN (ENSCAFG00845024952) ENSCAFG00845025008 OPA1 (ENSCAFG00845025222) HES1 (ENSCAFG00845025905) Dingo MODERN SPECIES 115 DHX36 (ENSCAFG00020004966) GPR149 (ENSCAFG00020005372) ENSCAFG00020005378 ENSCAFG00020005383 PLCH1 (ENSCAFG00020005412) C3orf33 (ENSCAFG00020005555) SLC33A1 (ENSCAFG00020005560) GMPS (ENSCAFG00020005568) KCNAB1 (ENSCAFG00020005593) ENSCAFG00020005601 ENSCAFG00020005606 TIPARP (ENSCAFG00020005619) ENSCAFG00020005632 LEKR1 (ENSCAFG00020005636) CCNL1 (ENSCAFG00020005656) ENSCAFG00020005804 ##22 ENSCAFG00020005806 SHOX2 (ENSCAFG00020005811) RSRC1 (ENSCAFG00020005818) ENSCAFG00020005828 GFM1 (ENSCAFG00020005878) LXN (ENSCAFG00020007353) RARRES1 (ENSCAFG00020007356) OPA1 (ENSCAFG00020007538) ENSCAFG00020011672 ASB12 (ENSCAFG00020011674) ARHGEF9 (ENSCAFG00020011678) Red fox MODERN SPECIES 56 CD36 (ENSVVUG00000019582) SEMA3C (ENSVVUG00000019617) ENSVVUG00000019629 HGF (ENSVVUG00000019636) CACNA2D1 (ENSVVUG00000019647) PCLO (ENSVVUG00000019718) ENSVVUG00000019825 SLC33A1 (ENSVVUG00000019826) GMPS (ENSVVUG00000019829) KCNAB1 (ENSVVUG00000019840) ENSVVUG00000019852 TIPARP (ENSVVUG00000019862) LEKR1 (ENSVVUG00000019882) CCNL1 (ENSVVUG00000019906) ENSVVUG00000020028 ENSVVUG00000020034 ##22 ENSVVUG00000020036 SHOX2 (ENSVVUG00000020055) ENSVVUG00000020061 ENSVVUG00000020068 MLF1 (ENSVVUG00000020071) GFM1 (ENSVVUG00000020091) LXN (ENSVVUG00000020273) ENSVVUG00000020274 OPA1 (ENSVVUG00000020418) HES1 (ENSVVUG00000025249) Caniformia_b ANCESTRAL SPECIES ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Mustelinae ANCESTRAL SPECIES 59 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 ENSGT00390000007739.e American mink MODERN SPECIES 228 KCNAB1 (ENSNVIG00000018556) SSR3 (ENSNVIG00000018782) TIPARP (ENSNVIG00000018807) LEKR1 (ENSNVIG00000018848) CCNL1 (ENSNVIG00000018919) VEPH1 (ENSNVIG00000018973) PTX3 (ENSNVIG00000019067) ##22 SHOX2 (ENSNVIG00000019086) RSRC1 (ENSNVIG00000019133) MLF1 (ENSNVIG00000019251) GFM1 (ENSNVIG00000019403) ENSNVIG00000019454 RARRES1 (ENSNVIG00000019465) MFSD1 (ENSNVIG00000019471) ENSNVIG00000019488 Ferret MODERN SPECIES 211 DHX36 (ENSMPUG00000002723) GPR149 (ENSMPUG00000002729) ENSMPUG00000002741 MME (ENSMPUG00000002746) PLCH1 (ENSMPUG00000002757) C3orf33 (ENSMPUG00000002773) SLC33A1 (ENSMPUG00000002776) GMPS (ENSMPUG00000002781) ENSMPUG00000002788 KCNAB1 (ENSMPUG00000002795) SSR3 (ENSMPUG00000002806) TIPARP (ENSMPUG00000002811) ENSMPUG00000002816 CCNL1 (ENSMPUG00000002825) VEPH1 (ENSMPUG00000002831) PTX3 (ENSMPUG00000002835) ##22 SHOX2 (ENSMPUG00000002839) RSRC1 (ENSMPUG00000002851) MLF1 (ENSMPUG00000002854) GFM1 (ENSMPUG00000002859) LXN (ENSMPUG00000002863) RARRES1 (ENSMPUG00000002867) MFSD1 (ENSMPUG00000002871) ENSMPUG00000002880 IQCJ (ENSMPUG00000002883) ENSMPUG00000002888 SCHIP1 (ENSMPUG00000002891) ENSMPUG00000002894 IL12A (ENSMPUG00000002896) ENSMPUG00000002900 ENSMPUG00000002908 Ursidae ANCESTRAL SPECIES 1 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745.d ENSGT00940000166505 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Ursus ANCESTRAL SPECIES 14 ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745.d ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00440000033499 ENSGT00900000141094 American black bear MODERN SPECIES 5085 PTX3 (ENSUAMG00000008222) ##22 ENSUAMG00000008223 Polar bear MODERN SPECIES 112 DHX36 (ENSUMAG00000011908) GPR149 (ENSUMAG00000011899) ENSUMAG00000011884 ENSUMAG00000011878 ENSUMAG00000011864 PLCH1 (ENSUMAG00000011780) C3orf33 (ENSUMAG00000011751) SLC33A1 (ENSUMAG00000011735) GMPS (ENSUMAG00000011640) KCNAB1 (ENSUMAG00000011542) SSR3 (ENSUMAG00000011504) TIPARP (ENSUMAG00000011453) ENSUMAG00000011444 ENSUMAG00000011399 CCNL1 (ENSUMAG00000011392) ENSUMAG00000011385 ##22 VEPH1 (ENSUMAG00000011364) ENSUMAG00000011328 RSRC1 (ENSUMAG00000011315) MLF1 (ENSUMAG00000011284) LXN (ENSUMAG00000011274) GFM1 (ENSUMAG00000011268) RARRES1 (ENSUMAG00000011267) ENSUMAG00000011265 MFSD1 (ENSUMAG00000011253) IQCJ (ENSUMAG00000011226) SCHIP1 (ENSUMAG00000011209) IL12A (ENSUMAG00000011206) ENSUMAG00000011202 IFT80 (ENSUMAG00000011195) ENSUMAG00000011157 Giant Panda MODERN SPECIES ARHGEF26 (ENSAMEG00000011755) DHX36 (ENSAMEG00000011721) GPR149 (ENSAMEG00000011712) MME (ENSAMEG00000001740) STRIT1 (ENSAMEG00000024481) PLCH1 (ENSAMEG00000002608) C3orf33 (ENSAMEG00000024093) SLC33A1 (ENSAMEG00000002592) GMPS (ENSAMEG00000002551) KCNAB1 (ENSAMEG00000003137) SSR3 (ENSAMEG00000030214) ENSAMEG00000018879 TIPARP (ENSAMEG00000003118) LEKR1 (ENSAMEG00000003113) CCNL1 (ENSAMEG00000003092) PTX3 (ENSAMEG00000013511) ##22 VEPH1 (ENSAMEG00000003085) SHOX2 (ENSAMEG00000013513) RSRC1 (ENSAMEG00000029988) MLF1 (ENSAMEG00000013527) LXN (ENSAMEG00000013580) GFM1 (ENSAMEG00000013542) RARRES1 (ENSAMEG00000013589) MFSD1 (ENSAMEG00000013606) ENSAMEG00000030171 IQCJ (ENSAMEG00000013634) ENSAMEG00000014596 ENSAMEG00000003144 ENSAMEG00000031019 C3orf80 (ENSAMEG00000030959) IFT80 (ENSAMEG00000002218) Atlantogenata ANCESTRAL SPECIES 45 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00650000094113 ENSGT00390000005823 ENSGT00440000033499 Xenarthra ANCESTRAL SPECIES 142 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00530000063813.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b Sloth MODERN SPECIES 13202 ENSCHOG00000006284 ##22 Armadillo MODERN SPECIES 1154 C3orf33 (ENSDNOG00000031969) SLC33A1 (ENSDNOG00000045008) ENSDNOG00000040652 GMPS (ENSDNOG00000017772) ENSDNOG00000019348 ENSDNOG00000038913 KCNAB1 (ENSDNOG00000000745) ENSDNOG00000000752 ENSDNOG00000048811 TIPARP (ENSDNOG00000006676) ENSDNOG00000046381 ENSDNOG00000031446 ENSDNOG00000039650 CCNL1 (ENSDNOG00000009325) ENSDNOG00000031998 PTX3 (ENSDNOG00000036438) ##22 VEPH1 (ENSDNOG00000015818) ENSDNOG00000009228 SHOX2 (ENSDNOG00000000888) ENSDNOG00000031677 MLF1 (ENSDNOG00000008671) LXN (ENSDNOG00000039413) ENSDNOG00000016385 RARRES1 (ENSDNOG00000016391) ENSDNOG00000038632 MFSD1 (ENSDNOG00000005048) ENSDNOG00000033357 Afrotheria ANCESTRAL SPECIES 59 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Afrotheria_a ANCESTRAL SPECIES 57 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970.b ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000154287.b ENSGT00940000164641 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.b ENSGT00530000063813.a ENSGT00390000011700 ENSGT01030000234621.C.b ENSGT00390000000847 ENSGT00390000011127 ENSGT00390000016906 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000160146.C Elephant MODERN SPECIES 383 ENSLAFG00000011446 DHX36 (ENSLAFG00000015342) GPR149 (ENSLAFG00000015353) MME (ENSLAFG00000015397) PLCH1 (ENSLAFG00000001248) C3orf33 (ENSLAFG00000015059) SLC33A1 (ENSLAFG00000015062) GMPS (ENSLAFG00000012230) ENSLAFG00000010095 KCNAB1 (ENSLAFG00000014751) SSR3 (ENSLAFG00000014757) TIPARP (ENSLAFG00000008210) ENSLAFG00000029018 ENSLAFG00000014510 CCNL1 (ENSLAFG00000007715) PTX3 (ENSLAFG00000011043) ##22 VEPH1 (ENSLAFG00000011038) ENSLAFG00000000904 SHOX2 (ENSLAFG00000017816) ENSLAFG00000017819 MLF1 (ENSLAFG00000010939) LXN (ENSLAFG00000010951) GFM1 (ENSLAFG00000010945) RARRES1 (ENSLAFG00000010960) MFSD1 (ENSLAFG00000008125) ENSLAFG00000025702 IQCJ (ENSLAFG00000020769) SCHIP1 (ENSLAFG00000018474) IL12A (ENSLAFG00000001089) IFT80 (ENSLAFG00000017096) SMC4 (ENSLAFG00000017104) Hyrax MODERN SPECIES 6858 VEPH1 (ENSPCAG00000003214) PTX3 (ENSPCAG00000003280) ##22 Tenrec MODERN SPECIES 5482 ENSETEG00000007633 ##22 Platypus MODERN SPECIES ENSOANG00000050093 B3GNT5 (ENSOANG00000009184) RFC4 (ENSOANG00000048018) EIF4A2 (ENSOANG00000042142) ENSOANG00000043705 ENSOANG00000042947 ENSOANG00000036092 AHSG (ENSOANG00000046335) FARSB (ENSOANG00000015387) SGPP2 (ENSOANG00000001427) ENSOANG00000046117 PAX3 (ENSOANG00000007096) EPHA4 (ENSOANG00000010961) CCNL1 (ENSOANG00000014356) VEPH1 (ENSOANG00000046560) PTX3 (ENSOANG00000047492) ##22 ENSOANG00000022394 SHOX2 (ENSOANG00000049436) RSRC1 (ENSOANG00000020697) MLF1 (ENSOANG00000049528) GFM1 (ENSOANG00000021192) LXN (ENSOANG00000009904) ENSOANG00000022160 MFSD1 (ENSOANG00000008987) ENSOANG00000050117 IQCJ (ENSOANG00000021066) ENSOANG00000008700 ENSOANG00000002081 ENSOANG00000039342 IFT80 (ENSOANG00000029045) SMC4 (ENSOANG00000010917) Anura ANCESTRAL SPECIES 13 ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368.md ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000154287.b ENSGT00730000111251 ENSGT00390000005023.b ENSGT00550000074911 ENSGT00530000063813.a ENSGT00390000011700 ENSGT00390000011127 ENSGT00720000110080 ENSGT00390000005823 ENSGT00440000033499 ENSGT00900000141094 ENSGT00940000165917 ENSGT01050000244891.C.c.a Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000010956 ENSLLEG00000012287 ENSLLEG00000012374 KCNAB1 (ENSLLEG00000012432) ENSLLEG00000012674 SSR3 (ENSLLEG00000012692) ENSLLEG00000012737 TIPARP (ENSLLEG00000012757) LEKR1 (ENSLLEG00000012851) ENSLLEG00000013369 CCNL1 (ENSLLEG00000013395) ENSLLEG00000013711 ENSLLEG00000013793 VEPH1 (ENSLLEG00000013813) ENSLLEG00000013896 PTX3 (ENSLLEG00000013934) ##22 ENSLLEG00000014008 ENSLLEG00000014042 ENSLLEG00000014088 SHOX2 (ENSLLEG00000014111) RSRC1 (ENSLLEG00000014180) ENSLLEG00000014298 MLF1 (ENSLLEG00000014355) GFM1 (ENSLLEG00000014596) RARRES1 (ENSLLEG00000015433) MFSD1 (ENSLLEG00000015577) ENSLLEG00000015934 SCHIP1 (ENSLLEG00000015992) ENSLLEG00000016213 ENSLLEG00000016250 C3orf80 (ENSLLEG00000016308) Frog MODERN SPECIES 5 plch1 (ENSXETG00000007772) ENSXETG00000045875 ENSXETG00000012312 pomp (ENSXETG00000012306) gmps (ENSXETG00000033049) ENSXETG00000012284 vn2r1p (ENSXETG00000027720) kcnab1 (ENSXETG00000012263) ssr3 (ENSXETG00000027723) tiparp (ENSXETG00000012260) ENSXETG00000041898 ccnl1 (ENSXETG00000012250) ENSXETG00000012256 ENSXETG00000040523 lekr1 (ENSXETG00000030130) ptx3 (ENSXETG00000012244) ##22 veph1 (ENSXETG00000012240) slc66a1l (ENSXETG00000031055) shox2 (ENSXETG00000014058) rsrc1 (ENSXETG00000014059) mlf1 (ENSXETG00000047308) gfm1 (ENSXETG00000032551) ENSXETG00000042867 rarres1 (ENSXETG00000014097) mfsd1 (ENSXETG00000031203) schip1 (ENSXETG00000008715) ENSXETG00000034413 c3orf80 (ENSXETG00000046656) ift80 (ENSXETG00000008716) smc4 (ENSXETG00000008717) trim59 (ENSXETG00000030125) Actinopterygii ANCESTRAL SPECIES 10 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000164154 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT00940000174128.B ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000164637 ENSGT00940000156687.f.a ENSGT00390000015980 ENSGT00940000156687.f.b ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000178700 ENSGT00980000200350 Reedfish MODERN SPECIES 10 ENSECRG00000010565 PLCH1 (ENSECRG00000010521) c18h3orf33 (ENSECRG00000010494) slc33a1 (ENSECRG00000010484) gmps (ENSECRG00000010464) ENSECRG00000010428 ENSECRG00000010407 gale (ENSECRG00000010399) kcnab1a (ENSECRG00000010388) ssr3 (ENSECRG00000010382) TIPARP (ENSECRG00000010375) ENSECRG00000010373 LEKR1 (ENSECRG00000010372) ccnl1a (ENSECRG00000010360) ENSECRG00000010331 PTX3 (ENSECRG00000010311) ##22 veph1 (ENSECRG00000010298) ENSECRG00000010278 ENSECRG00000010255 ENSECRG00000010234 ENSECRG00000010223 ENSECRG00000007906 serpini1 (ENSECRG00000007616) pdcd10b (ENSECRG00000007601) WDR49 (ENSECRG00000007581) ENSECRG00000007571 ENSECRG00000007564 ENSECRG00000007533 SLITRK3 (ENSECRG00000007522) ENSECRG00000007518 otol1b (ENSECRG00000007493) Neopterygii ANCESTRAL SPECIES 17 ENSGT01050000244874.a.a.b ENSGT01100000263565.b.a.a.b ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT01100000263565.b.b ENSGT00940000160473 ENSGT00940000156760 ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000178700 ENSGT00980000200350 Osteoglossocephalai ANCESTRAL SPECIES 12 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000157023 ENSGT00940000157637.a Clupeocephala ANCESTRAL SPECIES 10 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00960000186767 ENSGT00940000163043 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 58 ENSGT00940000166814 ENSGT00940000162782 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000162647 ENSGT00940000159135.g ENSGT01100000263515.a.b.a.a.c ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000164637.ab ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b Otophysi ANCESTRAL SPECIES 204 ENSGT00940000166814 ENSGT00940000162782 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000159135.g ENSGT00390000018660 ENSGT01100000263515.a.b.a.a.c ##22 Characiphysae ANCESTRAL SPECIES 84 ENSGT00940000162782 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000159135.g ENSGT00940000162060.c ENSGT00390000018660 ENSGT01100000263515.a.b.a.a.c ##22 Channel catfish MODERN SPECIES 23 ENSIPUG00000014877 ENSIPUG00000014894 ENSIPUG00000014909 plch1 (ENSIPUG00000014937) c4h3orf33 (ENSIPUG00000014991) slc33a1 (ENSIPUG00000015034) gmps (ENSIPUG00000015059) ENSIPUG00000015178 Kcnab1 (ENSIPUG00000015241) ssr3 (ENSIPUG00000015293) tiparp (ENSIPUG00000015335) ENSIPUG00000015355 ccnl1 (ENSIPUG00000015420) ENSIPUG00000015472 veph1 (ENSIPUG00000015485) ptx3 (ENSIPUG00000015521) ##22 pepd (ENSIPUG00000015536) CHST8 (ENSIPUG00000015627) ENSIPUG00000015640 tuba1a (ENSIPUG00000015665) nedd4a (ENSIPUG00000015687) PRTG (ENSIPUG00000015757) Pygo1 (ENSIPUG00000015820) DYX1C1 (ENSIPUG00000015841) ENSIPUG00000015930 ccpg1 (ENSIPUG00000015938) pigb (ENSIPUG00000015958) ENSIPUG00000015974 rab27a (ENSIPUG00000015989) UNC13C (ENSIPUG00000016019) onecut1 (ENSIPUG00000016078) Characiphysae_b ANCESTRAL SPECIES 85 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000159135.g ENSGT00940000162060.c ENSGT00390000018660 ENSGT01100000263515.a.b.a.a.c ##22 ENSGT00990000204162 ENSGT01100000263564.a ENSGT00950000183181.B.b.l.b ENSGT00940000156649.c.a ENSGT00940000156649.d Characoidei ANCESTRAL SPECIES 98 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000165173 ENSGT00940000159135.g ENSGT00940000162060.c ENSGT00390000018660 ENSGT01100000263515.a.b.a.a.c ##22 ENSGT00990000204162 ENSGT01100000263564.a ENSGT00950000183181.B.b.l.b ENSGT00940000156649.c.a ENSGT00940000156649.d Red-bellied piranha MODERN SPECIES 253 ENSPNAG00000007110 ENSPNAG00000014373 PLCH1 (ENSPNAG00000014356) c18h3orf33 (ENSPNAG00000003076) slc33a1 (ENSPNAG00000004861) gmps (ENSPNAG00000014256) ENSPNAG00000014211 ENSPNAG00000014187 KCNAB1 (ENSPNAG00000014158) ssr3 (ENSPNAG00000014010) tiparp (ENSPNAG00000013979) ENSPNAG00000013954 ccnl1a (ENSPNAG00000013922) ENSPNAG00000013878 veph1 (ENSPNAG00000013868) PTX3 (ENSPNAG00000013831) ##22 Mexicana tetra MODERN SPECIES 9 ENSAMXG00000041414 ENSAMXG00000020169 ENSAMXG00000020182 PLCH1 (ENSAMXG00000020205) c18h3orf33 (ENSAMXG00000040372) slc33a1 (ENSAMXG00000035355) gmps (ENSAMXG00000029474) ENSAMXG00000030419 kcnab1a (ENSAMXG00000043084) ssr3 (ENSAMXG00000034367) TIPARP (ENSAMXG00000033452) ENSAMXG00000037577 ccnl1a (ENSAMXG00000010800) ENSAMXG00000010827 ENSAMXG00000038923 PTX3 (ENSAMXG00000041282) ##22 veph1 (ENSAMXG00000010844) ENSAMXG00000037258 ENSAMXG00000025906 ENSAMXG00000040836 ENSAMXG00000007963 ENSAMXG00000037758 ENSAMXG00000029267 ENSAMXG00000007423 SERF2 (ENSAMXG00000007428) zgc:162879 (ENSAMXG00000007430) sema4ba (ENSAMXG00000037313) znf710a (ENSAMXG00000007435) idh2 (ENSAMXG00000007438) ENSAMXG00000025198 RASGRF1 (ENSAMXG00000017015) Electric eel MODERN SPECIES 605 tiparp (ENSEEEG00000015727) ENSEEEG00000015728 ENSEEEG00000015729 ccnl1a (ENSEEEG00000015731) ENSEEEG00000015847 veph1 (ENSEEEG00000015853) ENSEEEG00000015863 ##22 ENSEEEG00000015866 C5AR1 (ENSEEEG00000015867) ENSEEEG00000015868 ENSEEEG00000015870 Cyprinoidei ANCESTRAL SPECIES 110 ENSGT00940000155481 ENSGT00940000160511.b ENSGT00940000161226.a ENSGT00940000156831 ENSGT00390000002172.A.a.f ENSGT00390000003912 ENSGT00390000011725.d.ab ENSGT00940000159135.g ENSGT01100000263515.a.b.a.a.c ##22 ENSGT00390000018660 ENSGT00940000156517 ENSGT01070000253972.a ENSGT00390000001015.d ENSGT00940000158052.a.h ENSGT00940000158201 ENSGT00940000160889 ENSGT00530000068221 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l.a.b ENSGT00940000156765.a.a ENSGT00940000157189.d ENSGT00920000149201 ENSGT00510000048522.i.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 78 ENSGT00980000198620 ENSGT00940000156933.d.a.a.a ENSGT00950000183204.a.b ENSGT00940000158183.a ENSGT00940000155492.a.b.i.b ENSGT00940000159713.j ENSGT01060000248588.a.d.a.h.a.b ENSGT00940000155481.b ENSGT00940000160511.b.e ENSGT00940000161226.a.a ENSGT00940000156831.d ENSGT00390000002172.A.a.f.b ENSGT00940000159135.g.b ENSGT00940000169328.a.a ENSGT00390000018660.i ENSGT01100000263515.a.b.a.a.c.a ##22 ENSGT00940000156517.`b ENSGT00390000001015.d ENSGT00940000158052.a.h.a.a ENSGT00940000158201.d.a ENSGT00940000160889.b ENSGT00530000068221 ENSGT00940000160889.a ENSGT00550000075063 ENSGT00940000161006.o ENSGT00940000160678.a.x.b.b ENSGT00390000017608.l.b ENSGT00940000161006.p ENSGT00940000160678.a.x.b.a ENSGT00390000017608.l.a.b ENSGT00940000156765.a.a.a Cyprininae_a ANCESTRAL SPECIES 156 ENSGT00980000198620 ENSGT00940000156933.d.a.a.a ENSGT00950000183204.a.b ENSGT00940000158183.a ENSGT00940000155492.a.b.i.b ENSGT00940000159713.j ENSGT01060000248588.a.d.a.h.a.b ENSGT00940000155481.b ENSGT00940000160511.b.e ENSGT00940000161226.a.a ENSGT00940000156831.d ENSGT00390000002172.A.a.f.b ENSGT00940000159135.g.b ENSGT00940000169328.a.a ENSGT00390000018660.i ENSGT01100000263515.a.b.a.a.c.a ##22 ENSGT00940000156517.`b ENSGT00390000001015.d ENSGT00940000158052.a.h.a.a ENSGT00940000158201.d.a ENSGT00940000160889.b ENSGT00530000068221 ENSGT00550000075063 ENSGT00940000161006.o ENSGT00940000160678.a.x.b.b ENSGT00390000017608.l.b ENSGT00940000161006.p ENSGT00940000160678.a.x.b.a ENSGT00390000017608.l.a.b ENSGT00940000156765.a.a.a ENSGT00940000157189.d.e Golden-line barbel MODERN SPECIES 875 ARHGAP42 (ENSSGRG00000018384) pgr (ENSSGRG00000020002) rnf7 (ENSSGRG00000020026) grk7b (ENSSGRG00000020030) fzd9b (ENSSGRG00000020032) baz1b (ENSSGRG00000020045) bcl7bb (ENSSGRG00000020434) ENSSGRG00000020435 ccnl1a (ENSSGRG00000020436) ENSSGRG00000020441 veph1 (ENSSGRG00000020442) PTX3 (ENSSGRG00000020443) ##22 Common carp reference MODERN SPECIES 19 ENSCCRG00000015117 ENSCCRG00000042497 ENSCCRG00000053243 ENSCCRG00000064318 cntn5 (ENSCCRG00000079597) ENSCCRG00000056117 pgr (ENSCCRG00000006098) ENSCCRG00000006081 rnf7 (ENSCCRG00000006076) grk7b (ENSCCRG00000070678) fzd9b (ENSCCRG00000077839) baz1b (ENSCCRG00000044255) bcl7bb (ENSCCRG00000040600) ccnl1a (ENSCCRG00000075281) veph1 (ENSCCRG00000071982) PTX3 (ENSCCRG00000031111) ##22 trip12 (ENSCCRG00000019568) fbxo36a (ENSCCRG00000055346) ENSCCRG00000004709 ENSCCRG00000047310 ENSCCRG00000031948 ENSCCRG00000056227 polr2i (ENSCCRG00000024088) pglyrp5 (ENSCCRG00000024093) ENSCCRG00000024096 ENSCCRG00000013664 ENSCCRG00000048415 akt2 (ENSCCRG00000064843) ccnp (ENSCCRG00000031964) si:ch211-132b12.7 (ENSCCRG00000072976) si:ch211-132b12.2 (ENSCCRG00000068621) Goldfish MODERN SPECIES 9 ABCC8 (ENSCARG00000031971) mob2b (ENSCARG00000031798) DUSP8 (ENSCARG00000031775) cntn5 (ENSCARG00000031654) ENSCARG00000031091 pgr (ENSCARG00000031039) ENSCARG00000030951 rnf7 (ENSCARG00000030925) grk7b (ENSCARG00000030913) fzd9b (ENSCARG00000030902) baz1b (ENSCARG00000030772) bcl7bb (ENSCARG00000030736) ccnl1a (ENSCARG00000030487) ENSCARG00000030457 ENSCARG00000030449 PTX3 (ENSCARG00000030440) ##22 veph1 (ENSCARG00000030366) trip12 (ENSCARG00000017830) fbxo36a (ENSCARG00000017379) ENSCARG00000017351 RASA2 (ENSCARG00000016710) ENSCARG00000016675 polr2i (ENSCARG00000016656) pglyrp5 (ENSCARG00000016631) ENSCARG00000016625 SNRPD2 (ENSCARG00000016613) VASP (ENSCARG00000013338) akt2 (ENSCARG00000013319) ccnp (ENSCARG00000013308) si:ch211-132b12.2 (ENSCARG00000013230) si:ch211-132b12.7 (ENSCARG00000013201) Cyprininae ANCESTRAL SPECIES 30 ENSGT00390000013374.b ENSGT00730000111174 ENSGT00940000155492.a.b.i.a ENSGT00940000159713.i ENSGT01060000248588.a.d.a.h.a.a ENSGT00940000155481.a ENSGT00940000160511.b.f ENSGT00940000161226.a.b ENSGT00940000156831.c ENSGT00390000002172.A.a.f.a ENSGT00390000003912 ENSGT00390000011725.d.ab ENSGT00940000159135.g.a ENSGT00940000168131 ENSGT00390000018660.j ENSGT01100000263515.a.b.a.a.c.b ##22 ENSGT00940000156517.ab ENSGT01070000253972.a ENSGT00940000158052.a.h.a.b ENSGT00940000158201.c Goldfish MODERN SPECIES 37 tbrg1 (ENSCARG00000068814) cfap45 (ENSCARG00000068870) ENSCARG00000068890 pgr (ENSCARG00000068944) ENSCARG00000068981 rnf7 (ENSCARG00000069001) ENSCARG00000069007 fzd9b (ENSCARG00000069015) baz1b (ENSCARG00000069049) bcl7bb (ENSCARG00000069207) tsen34 (ENSCARG00000069209) selenot1b (ENSCARG00000069211) ccnl1a (ENSCARG00000069231) ankrd67 (ENSCARG00000069293) veph1 (ENSCARG00000069300) PTX3 (ENSCARG00000069343) ##22 ENSCARG00000069350 trip12 (ENSCARG00000054246) ENSCARG00000061780 RASA2 (ENSCARG00000061827) KIFC3 (ENSCARG00000062826) wt1b (ENSCARG00000063375) prrg4 (ENSCARG00000063582) QSER1 (ENSCARG00000063600) depdc7a (ENSCARG00000063648) cstf3 (ENSCARG00000063741) rpl35a (ENSCARG00000065008) abcc5 (ENSCARG00000065054) rnpepl1 (ENSCARG00000065448) DVL3 (ENSCARG00000065565) ap2m1b (ENSCARG00000065829) Cyprininae_a ANCESTRAL SPECIES 105 ENSGT00390000007968 ENSGT00940000158183.b ENSGT00940000155492.a.b.i.a ENSGT00940000159713.i ENSGT01060000248588.a.d.a.g ENSGT01060000248588.a.d.a.h.a.a ENSGT00940000155481.a ENSGT00940000160511.b.f ENSGT00940000161226.a.b ENSGT00940000156831.c ENSGT00390000002172.A.a.f.a ENSGT00390000003912 ENSGT00390000011725.d.ab ENSGT00940000159135.g.a ENSGT00390000018660.j ENSGT01100000263515.a.b.a.a.c.b ##22 ENSGT00940000156517.ab ENSGT01070000253972.a ENSGT00940000158052.a.h.a.b ENSGT00940000158201.c ENSGT00940000160889.a Common carp reference MODERN SPECIES 9 DDX6 (ENSCCRG00000057038) ENSCCRG00000074196 ENSCCRG00000033634 ttc36 (ENSCCRG00000009731) cntn5 (ENSCCRG00000076564) ENSCCRG00000043716 pgr (ENSCCRG00000002719) ENSCCRG00000076134 ENSCCRG00000006172 rnf7 (ENSCCRG00000064216) fzd9b (ENSCCRG00000074535) baz1b (ENSCCRG00000040577) bcl7bb (ENSCCRG00000079634) tsen34 (ENSCCRG00000028614) ccnl1a (ENSCCRG00000028624) PTX3 (ENSCCRG00000041317) ##22 veph1 (ENSCCRG00000029195) trip12 (ENSCCRG00000032976) ENSCCRG00000072235 ENSCCRG00000047292 ENSCCRG00000039131 ENSCCRG00000078527 ENSCCRG00000048362 pglyrp5 (ENSCCRG00000053377) ENSCCRG00000072335 snrpd2 (ENSCCRG00000053937) ENSCCRG00000074765 akt2 (ENSCCRG00000063888) si:ch211-132b12.7 (ENSCCRG00000076333) chrna5 (ENSCCRG00000022999) zgc:101040 (ENSCCRG00000055176) Golden-line barbel MODERN SPECIES 620 ENSSGRG00000040202 pgr (ENSSGRG00000040217) ENSSGRG00000040224 rnf7 (ENSSGRG00000040225) grk7b (ENSSGRG00000040230) fzd9b (ENSSGRG00000040242) fzd9b (ENSSGRG00000040244) baz1b (ENSSGRG00000040247) bcl7bb (ENSSGRG00000040276) tsen34 (ENSSGRG00000040279) selenot1b (ENSSGRG00000040282) ccnl1a (ENSSGRG00000040288) ENSSGRG00000040576 veph1 (ENSSGRG00000040577) PTX3 (ENSSGRG00000040578) ##22 trip12 (ENSSGRG00000040627) ENSSGRG00000042806 RASA2 (ENSSGRG00000042820) ENSSGRG00000043794 polr2i (ENSSGRG00000043795) pglyrp5 (ENSSGRG00000043801) FOXG1 (ENSSGRG00000043802) SNRPD2 (ENSSGRG00000043803) ENSSGRG00000043804 akt2 (ENSSGRG00000043820) ccnp (ENSSGRG00000044599) si:ch211-132b12.7 (ENSSGRG00000044600) chrna5 (ENSSGRG00000044606) ENSSGRG00000044607 sema6dl (ENSSGRG00000044623) Zebrafish MODERN SPECIES 9 NECTIN1 (ENSDARG00000086034) ttc36 (ENSDARG00000011693) cntn5 (ENSDARG00000021584) ARHGAP42 (ENSDARG00000010654) pgr (ENSDARG00000035966) ENSDARG00000067730 rnf7 (ENSDARG00000055524) grk7b (ENSDARG00000055534) fzd9b (ENSDARG00000014673) baz1b (ENSDARG00000102832) bcl7bb (ENSDARG00000040396) tsen34 (ENSDARG00000061370) selenot1b (ENSDARG00000027595) ccnl1a (ENSDARG00000055124) ankrd67 (ENSDARG00000068274) PTX3 (ENSDARG00000068275) ##22 veph1 (ENSDARG00000031095) trip12 (ENSDARG00000061397) fbxo36a (ENSDARG00000010662) ENSDARG00000100607 RASA2 (ENSDARG00000078775) ENSDARG00000076050 ENSDARG00000094126 polr2i (ENSDARG00000040443) pglyrp5 (ENSDARG00000068382) foxg1c (ENSDARG00000068380) snrpd2 (ENSDARG00000040440) ENSDARG00000017105 akt2 (ENSDARG00000011219) ccnp (ENSDARG00000055250) si:ch211-132b12.7 (ENSDARG00000068374) Clupeiformes ANCESTRAL SPECIES 59 ENSGT01100000263565.b.a.b.b.b ENSGT00940000163991 ENSGT00940000166814 ENSGT00940000162782 ENSGT00940000165453 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135.g ENSGT01100000263515.a.b.a.a.c ##22 ENSGT00390000018660 ENSGT00940000163939 ENSGT00940000164637.ab ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B Denticle herring MODERN SPECIES 10 ENSDCDG00000024141 ENSDCDG00000024132 ENSDCDG00000024028 ENSDCDG00000024005 ENSDCDG00000024000 PLCH1 (ENSDCDG00000023888) c18h3orf33 (ENSDCDG00000023877) slc33a1 (ENSDCDG00000023875) gmps (ENSDCDG00000023193) ENSDCDG00000033970 KCNAB1 (ENSDCDG00000033942) ssr3 (ENSDCDG00000033934) tiparp (ENSDCDG00000033932) LEKR1 (ENSDCDG00000033925) ccnl1a (ENSDCDG00000033814) PTX3 (ENSDCDG00000033807) ##22 veph1 (ENSDCDG00000033800) ENSDCDG00000033799 ENSDCDG00000033794 ENSDCDG00000033791 serpini1 (ENSDCDG00000033787) pdcd10a (ENSDCDG00000033772) ENSDCDG00000033768 WDR49 (ENSDCDG00000033761) ENSDCDG00000033755 ENSDCDG00000031418 SLITRK3 (ENSDCDG00000031263) ENSDCDG00000031261 ENSDCDG00000031259 fam168a (ENSDCDG00000031256) P2RY6 (ENSDCDG00000031254) Atlantic herring MODERN SPECIES 25 ENSCHAG00000017278 ENSCHAG00000017041 ENSCHAG00000016846 ENSCHAG00000016606 PLCH1 (ENSCHAG00000016341) c18h3orf33 (ENSCHAG00000016303) slc33a1 (ENSCHAG00000016285) gmps (ENSCHAG00000016061) ENSCHAG00000015878 KCNAB1 (ENSCHAG00000014685) ssr3 (ENSCHAG00000014611) tiparp (ENSCHAG00000014600) ENSCHAG00000014573 ccnl1a (ENSCHAG00000014435) ENSCHAG00000014413 PTX3 (ENSCHAG00000014406) ##22 veph1 (ENSCHAG00000014331) ENSCHAG00000014320 golim4a (ENSCHAG00000014307) ENSCHAG00000014263 serpini1 (ENSCHAG00000014217) pdcd10a (ENSCHAG00000014129) ENSCHAG00000014097 SERPINI2 (ENSCHAG00000014081) ENSCHAG00000014069 ENSCHAG00000004555 SLITRK3 (ENSCHAG00000004141) ENSCHAG00000004117 ENSCHAG00000004109 ENSCHAG00000004101 ENSCHAG00000004063 Otomorpha ANCESTRAL SPECIES 518 ENSGT00940000163715.a ENSGT00940000159135.h ENSGT01100000263515.a.b.a.a.d ##22 ENSGT00940000164637.`b ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a.a Clupeiformes ANCESTRAL SPECIES 371 ENSGT00950000182988.a.a.b.n ENSGT00940000163715.a ENSGT00940000159135.h ENSGT01100000263515.a.b.a.a.d ##22 ENSGT00940000164637.`b ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a.a ENSGT00940000160221.d ENSGT00390000018319.a.b.b.b.a.b ENSGT00950000182964.a.b.b.b ENSGT01100000263497.E.a.b ENSGT00940000159915.b.i.a Atlantic herring MODERN SPECIES 14 ENSCHAG00000014531 ENSCHAG00000014429 ENSCHAG00000014423 ENSCHAG00000014411 ing5b (ENSCHAG00000014235) ENSCHAG00000014230 ENSCHAG00000014201 ENSCHAG00000014192 ENSCHAG00000014182 ing5b (ENSCHAG00000014114) PAK2 (ENSCHAG00000013452) klhl6 (ENSCHAG00000013398) CCNL1 (ENSCHAG00000013290) PTX3 (ENSCHAG00000013136) ##22 golim4b (ENSCHAG00000013086) pdcd10b (ENSCHAG00000013033) SLITRK3 (ENSCHAG00000013024) NRDC (ENSCHAG00000007762) ENSCHAG00000007586 ENSCHAG00000007555 ENSCHAG00000007487 ENSCHAG00000007458 ENSCHAG00000007447 ENSCHAG00000007428 gadd45bb (ENSCHAG00000007413) gng7 (ENSCHAG00000007393) DIRAS1 (ENSCHAG00000007383) yme1l1b (ENSCHAG00000005394) ENSCHAG00000005345 Denticle herring MODERN SPECIES 14 clul1 (ENSDCDG00000000792) ENSDCDG00000000790 colec12 (ENSDCDG00000000787) stam (ENSDCDG00000000772) tmem236 (ENSDCDG00000000766) cacnb2b (ENSDCDG00000000753) ENSDCDG00000000740 mrc1b (ENSDCDG00000000602) ENSDCDG00000000542 MYADM (ENSDCDG00000000536) ENSDCDG00000000534 ENSDCDG00000000363 NFATC4 (ENSDCDG00000029970) ltb4r2b (ENSDCDG00000029966) ltb4r2b (ENSDCDG00000029965) PTX3 (ENSDCDG00000029963) ##22 ENSDCDG00000029962 golim4b (ENSDCDG00000029960) pdcd10b (ENSDCDG00000029954) SLITRK3 (ENSDCDG00000029952) NRDC (ENSDCDG00000029105) FAM163A (ENSDCDG00000029080) ENSDCDG00000029078 ENSDCDG00000029075 ENSDCDG00000029073 ENSDCDG00000029071 ENSDCDG00000029067 ENSDCDG00000029066 ENSDCDG00000029065 ENSDCDG00000029061 ENSDCDG00000029058 Otophysi ANCESTRAL SPECIES 393 ENSGT00940000163715.a ENSGT00940000159135.h ENSGT01100000263515.a.b.a.a.d ##22 ENSGT00940000164637.`b ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a.a Cyprinoidei ANCESTRAL SPECIES 1 ENSGT00950000182988.a.a.a ENSGT00940000163715.a ENSGT00940000159135.h ENSGT01100000263515.a.b.a.a.d ##22 ENSGT00940000164637.`b ENSGT00390000017913.q.a ENSGT00390000017913.q.b ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a.a ENSGT00940000154611.ad.a ENSGT00940000163581.f.b ENSGT00940000160221.d ENSGT00390000018319.a.b.b.b.a.b ENSGT00950000182964.a.b.b.a.b.b ENSGT01100000263497.E.a.b ENSGT00940000159915.b.i.b ENSGT00940000167061 ENSGT00940000164644 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 127 ENSGT00940000158159.j.a ENSGT00950000182988.a.a.a.a ENSGT00940000163715.a.a ENSGT00940000159135.h.a ENSGT01100000263515.a.b.a.a.d.a ##22 ENSGT00940000164637.`b.a ENSGT00390000017913.q.a ENSGT00940000158681.b.a ENSGT00940000155026.c.b ENSGT00940000159228.b.a.a ENSGT00940000154611.ad.a.l.b ENSGT00940000163581.f.b.g.a ENSGT00940000160221.d.b ENSGT00390000018319.a.b.b.b.a.b.e.b ENSGT00950000182964.a.b.b.a.b.b.b ENSGT01100000263497.E.a.b.c ENSGT00940000159915.b.i.b.a ENSGT00940000167061.h ENSGT00940000164644.e ENSGT00940000155528.s.b.a Goldfish MODERN SPECIES 19 ENSCARG00000017538 ENSCARG00000017549 ENSCARG00000017552 ENSCARG00000017555 ENSCARG00000017561 ENSCARG00000017566 ENSCARG00000017574 ENSCARG00000017580 ENSCARG00000017585 ENSCARG00000017589 ENSCARG00000017603 ing5b (ENSCARG00000017611) pak2a (ENSCARG00000017628) klhl6 (ENSCARG00000017658) CCNL1 (ENSCARG00000017696) PTX3 (ENSCARG00000017845) ##22 golim4b (ENSCARG00000017859) PDCD10 (ENSCARG00000017896) SLITRK3 (ENSCARG00000018009) NRDC (ENSCARG00000018106) ENSCARG00000019019 ENSCARG00000019029 ENSCARG00000019041 ENSCARG00000019055 gadd45bb (ENSCARG00000019078) gng7 (ENSCARG00000019088) diras1b (ENSCARG00000019099) zgc:101744 (ENSCARG00000019104) slc1a8b (ENSCARG00000019111) elavl1a (ENSCARG00000019141) tspan37 (ENSCARG00000019207) Cyprininae_a ANCESTRAL SPECIES 145 ENSGT00940000158159.j.a ENSGT00950000182988.a.a.a.a ENSGT00940000163715.a.a ENSGT00940000159135.h.a ENSGT01100000263515.a.b.a.a.d.a ##22 ENSGT00940000164637.`b.a ENSGT00390000017913.q.a ENSGT00940000158681.b.a ENSGT00940000155026.c.b ENSGT00940000159228.b.a.a ENSGT00940000154611.ad.a.l.b ENSGT00940000163581.f.b.g.a ENSGT00940000160221.d.b ENSGT00390000018319.a.b.b.b.a.b.e.b ENSGT00950000182964.a.b.b.a.b.b.b ENSGT01100000263497.E.a.b.c ENSGT00940000159915.b.i.b.a ENSGT00940000167061.h ENSGT00940000164644.e ENSGT00940000155528.s.b.a Common carp reference MODERN SPECIES 29 ENSCCRG00000000907 ENSCCRG00000056803 ENSCCRG00000022012 ENSCCRG00000014988 ENSCCRG00000016901 ENSCCRG00000078299 ENSCCRG00000059322 ENSCCRG00000077347 ENSCCRG00000074519 ENSCCRG00000067236 ENSCCRG00000062603 ing5b (ENSCCRG00000016909) pak2a (ENSCCRG00000016950) klhl6 (ENSCCRG00000000589) ENSCCRG00000023322 ENSCCRG00000023384 ##22 golim4b (ENSCCRG00000000650) ENSCCRG00000023399 ENSCCRG00000062600 ENSCCRG00000031954 ENSCCRG00000082258 ENSCCRG00000023681 ENSCCRG00000030873 ENSCCRG00000073635 ENSCCRG00000023669 gadd45bb (ENSCCRG00000023668) diras1b (ENSCCRG00000059768) zgc:101744 (ENSCCRG00000075285) slc1a8b (ENSCCRG00000030305) elavl1a (ENSCCRG00000058173) tspan37 (ENSCCRG00000030291) Golden-line barbel MODERN SPECIES 140 ENSSGRG00000031822 ENSSGRG00000031824 ENSSGRG00000031826 ENSSGRG00000031827 ENSSGRG00000031829 ENSSGRG00000031830 ENSSGRG00000031831 ENSSGRG00000031832 ENSSGRG00000031833 ENSSGRG00000031834 ENSSGRG00000031835 ing5b (ENSSGRG00000031836) pak2a (ENSSGRG00000031842) klhl6 (ENSSGRG00000032106) CCNL1 (ENSSGRG00000032107) PTX3 (ENSSGRG00000032140) ##22 golim4b (ENSSGRG00000032141) ENSSGRG00000032145 SLITRK3 (ENSSGRG00000032159) NRDC (ENSSGRG00000032169) ENSSGRG00000032306 ENSSGRG00000032308 ENSSGRG00000032309 ENSSGRG00000032310 ENSSGRG00000032311 gadd45bb (ENSSGRG00000032312) gng7 (ENSSGRG00000032313) diras1b (ENSSGRG00000032314) zgc:101744 (ENSSGRG00000032315) slc1a8b (ENSSGRG00000032322) elavl1a (ENSSGRG00000032628) Cyprininae ANCESTRAL SPECIES 71 ENSGT00830000128446.a.d.i.a.b.a.a.a ENSGT01030000234557.A.f.i.a.b.a.b.a ENSGT01030000234557.B.x.a.a.a ENSGT01030000234557.A.f.i.a.b.b.a.b ENSGT01030000234557.A.f.h.b.a.a.a.a.b.b.a.a.a ENSGT01030000234557.B.x.a.a.b ENSGT01030000234557.A.f.i.b.a.a.a.a.a.a.a ENSGT01030000234557.A.f.h.b.b.b ENSGT01030000234557.A.f.h.b.b.a ENSGT01030000234557.A.f.i.b.a.a.b ENSGT00940000158159.j.b ENSGT00950000182988.a.a.a.b ENSGT00940000164826 ENSGT00940000163715.a.b ENSGT00940000159135.h.b ENSGT01100000263515.a.b.a.a.d.b ##22 ENSGT00940000164637.`b.b ENSGT00390000017913.q.b ENSGT00940000158681.b.b ENSGT00940000155026.c.a ENSGT00940000154611.ad.a.l.a ENSGT00940000163581.f.b.h ENSGT00940000160221.d.a ENSGT00390000018319.a.b.b.b.a.b.f ENSGT00950000182964.a.b.b.a.b.b.a ENSGT01100000263497.E.a.b.d ENSGT00940000159915.b.i.b.b ENSGT00940000167061.g ENSGT00940000164644.f ENSGT00940000155528.s.b.b ENSGT00940000154954.ob.b Goldfish DUPLICATION Goldfish MODERN SPECIES 11 ENSCARG00000017980 ENSCARG00000018026 NRDC (ENSCARG00000018138) SLITRK3 (ENSCARG00000019551) ENSCARG00000019555 pdcd10b (ENSCARG00000019563) golim4b (ENSCARG00000019623) PTX3 (ENSCARG00000019650) ##22 CCNL1 (ENSCARG00000019673) klhl6 (ENSCARG00000019807) ing5b (ENSCARG00000019818) pak2a (ENSCARG00000019860) ENSCARG00000019938 klhl6 (ENSCARG00000019942) CCNL1 (ENSCARG00000019965) PTX3 (ENSCARG00000020012) ##22 golim4b (ENSCARG00000020023) pdcd10b (ENSCARG00000020036) gpr160 (ENSCARG00000020058) nadkb (ENSCARG00000020082) sec62 (ENSCARG00000020197) samd7 (ENSCARG00000020227) apoda.2 (ENSCARG00000020240) ENSCARG00000020312 MYADM (ENSCARG00000020499) ENSCARG00000020506 NFATC4 (ENSCARG00000020515) ltb4r2b (ENSCARG00000000130) ENSCARG00000000193 parp2 (ENSCARG00000000317) zgc:66427 (ENSCARG00000000372) Goldfish MODERN SPECIES 11 apoda.2 (ENSCARG00000020240) samd7 (ENSCARG00000020227) sec62 (ENSCARG00000020197) nadkb (ENSCARG00000020082) gpr160 (ENSCARG00000020058) pdcd10b (ENSCARG00000020036) golim4b (ENSCARG00000020023) PTX3 (ENSCARG00000020012) ##22 CCNL1 (ENSCARG00000019965) klhl6 (ENSCARG00000019942) ENSCARG00000019938 pak2a (ENSCARG00000019860) ing5b (ENSCARG00000019818) klhl6 (ENSCARG00000019807) CCNL1 (ENSCARG00000019673) PTX3 (ENSCARG00000019650) ##22 golim4b (ENSCARG00000019623) pdcd10b (ENSCARG00000019563) ENSCARG00000019555 SLITRK3 (ENSCARG00000019551) NRDC (ENSCARG00000018138) ENSCARG00000018026 ENSCARG00000017980 ENSCARG00000017949 ENSCARG00000017919 CARTPT (ENSCARG00000017906) gadd45bb (ENSCARG00000017888) gng7 (ENSCARG00000017876) diras1b (ENSCARG00000017869) zgc:101744 (ENSCARG00000017852) slc1a8b (ENSCARG00000017832) Cyprininae_a ANCESTRAL SPECIES 84 ENSGT01030000234557.A.f.i.b.a.a.a.a.a.b.b ENSGT00830000128446.a.d.i.b.a.b.a.b ENSGT01030000235051.b.a.a.a ENSGT01030000234557.A.f.i.b.a.a.b ENSGT01030000234557.A.f.h.b.b.a ENSGT00940000158159.j.b ENSGT00950000182988.a.a.a.b ENSGT00940000163715.a.b ENSGT00940000159135.h.b ENSGT01100000263515.a.b.a.a.d.b ##22 ENSGT00940000164637.`b.b ENSGT00390000017913.q.b ENSGT00940000158681.b.b ENSGT00940000155026.c.a ENSGT00940000154611.ad.a.l.a ENSGT00940000163581.f.b.h ENSGT00940000160221.d.a ENSGT00390000018319.a.b.b.b.a.b.f ENSGT00950000182964.a.b.b.a.b.b.a ENSGT01100000263497.E.a.b.d ENSGT00940000159915.b.i.b.b ENSGT00940000167061.g ENSGT00940000164644.f ENSGT00940000155528.s.b.b ENSGT00940000154954.ob.b Golden-line barbel MODERN SPECIES 20 ENSSGRG00000035619 ENSSGRG00000035620 ENSSGRG00000035621 ENSSGRG00000035622 ENSSGRG00000035623 ENSSGRG00000035624 ENSSGRG00000035625 ENSSGRG00000035627 ENSSGRG00000035628 ENSSGRG00000035630 ENSSGRG00000035632 ing5b (ENSSGRG00000035633) pak2a (ENSSGRG00000035652) KLHL6 (ENSSGRG00000035955) CCNL1 (ENSSGRG00000035969) PTX3 (ENSSGRG00000036003) ##22 golim4b (ENSSGRG00000036007) pdcd10b (ENSSGRG00000036011) SLITRK3 (ENSSGRG00000036279) NRDC (ENSSGRG00000036303) ENSSGRG00000036723 ENSSGRG00000036728 ENSSGRG00000036736 ENSSGRG00000036738 CARTPT (ENSSGRG00000036739) gadd45bb (ENSSGRG00000036740) gng7 (ENSSGRG00000036741) diras1b (ENSSGRG00000036742) zgc:101744 (ENSSGRG00000036745) slc1a8b (ENSSGRG00000036746) elavl1a (ENSSGRG00000036750) Common carp reference MODERN SPECIES 21 ENSCCRG00000066576 ENSCCRG00000072570 ENSCCRG00000062406 ENSCCRG00000037872 ENSCCRG00000016710 ENSCCRG00000068473 ENSCCRG00000000512 ENSCCRG00000058816 ENSCCRG00000060834 ENSCCRG00000000542 ENSCCRG00000000534 ing5b (ENSCCRG00000000550) pak2a (ENSCCRG00000000567) klhl6 (ENSCCRG00000061397) ENSCCRG00000000611 ENSCCRG00000077842 ##22 golim4b (ENSCCRG00000023387) pdcd10b (ENSCCRG00000000667) ENSCCRG00000074192 ENSCCRG00000010964 ENSCCRG00000059440 ENSCCRG00000080447 ENSCCRG00000057365 gadd45bb (ENSCCRG00000073247) ENSCCRG00000062703 diras1b (ENSCCRG00000071669) zgc:101744 (ENSCCRG00000029818) slc1a8b (ENSCCRG00000029815) elavl1a (ENSCCRG00000067682) pex19 (ENSCCRG00000029800) copa (ENSCCRG00000029759) Zebrafish MODERN SPECIES 11 ENSDARG00000079242 ENSDARG00000078427 ENSDARG00000114269 ENSDARG00000077036 ENSDARG00000115145 ENSDARG00000087496 ENSDARG00000099587 ENSDARG00000101803 ENSDARG00000102259 ENSDARG00000105228 ing5b (ENSDARG00000068175) pak2a (ENSDARG00000068177) ENSDARG00000114484 klhl6 (ENSDARG00000026990) ccnl1b (ENSDARG00000012140) PTX3 (ENSDARG00000079515) ##22 golim4b (ENSDARG00000014545) ENSDARG00000111952 pdcd10b (ENSDARG00000012591) SLITRK3 (ENSDARG00000074739) NRDC (ENSDARG00000019596) ENSDARG00000077470 ENSDARG00000060315 ifi44c1 (ENSDARG00000092883) ifi44c2 (ENSDARG00000060322) ENSDARG00000060326 CARTPT (ENSDARG00000104363) gadd45bb (ENSDARG00000013576) gng7 (ENSDARG00000038693) diras1b (ENSDARG00000009372) zgc:101744 (ENSDARG00000038694) Characiphysae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.a.d ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.a.d ##22 Characoidei ANCESTRAL SPECIES 366 ENSGT00950000182988.a.a.a ENSGT00940000164826 ENSGT01100000263515.a.b.a.a.d ##22 ENSGT00390000017913 ENSGT00940000158681.b ENSGT00940000155026.c ENSGT00940000159228.b.a.a Red-bellied piranha MODERN SPECIES 749 zgc:101744 (ENSPNAG00000014099) diras1b (ENSPNAG00000014073) gng7 (ENSPNAG00000014056) GADD45B (ENSPNAG00000003011) ENSPNAG00000014040 ENSPNAG00000014029 ifi44c2 (ENSPNAG00000013999) ENSPNAG00000013977 ENSPNAG00000013960 ENSPNAG00000013943 ENSPNAG00000013933 ing5b (ENSPNAG00000002989) pak2a (ENSPNAG00000013893) ENSPNAG00000013860 PTX3 (ENSPNAG00000013839) ##22 pdcd10b (ENSPNAG00000002961) Mexicana tetra MODERN SPECIES 251 ENSAMXG00000033021 diras1b (ENSAMXG00000043039) gng7 (ENSAMXG00000006408) ENSAMXG00000043110 CARTPT (ENSAMXG00000035479) ENSAMXG00000033838 ENSAMXG00000030877 ENSAMXG00000031541 ENSAMXG00000006431 ENSAMXG00000039115 ing5b (ENSAMXG00000036583) ENSAMXG00000035432 pak2a (ENSAMXG00000006438) ENSAMXG00000006439 PTX3 (ENSAMXG00000042263) ##22 pdcd10b (ENSAMXG00000006445) SLITRK3 (ENSAMXG00000025728) NRDC (ENSAMXG00000006456) ENSAMXG00000031883 SMARCD3 (ENSAMXG00000000303) abcf2a (ENSAMXG00000000301) faim2a (ENSAMXG00000042797) ttc19 (ENSAMXG00000039249) ENSAMXG00000041212 Euteleosteomorpha ANCESTRAL SPECIES 66 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000167407 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000013989.b Protacanthopterygii ANCESTRAL SPECIES 51 ENSGT00940000162782 ENSGT00940000165453 ENSGT01030000235172 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000175614 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.k.b ENSGT00390000018660.k.a ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000158681.a ENSGT00390000013989.b ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.k.b ENSGT00940000153798.B.k.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 44 ENSGT00940000163991.cb.b.b.b ENSGT00940000166814 ENSGT00940000165453.f ENSGT01030000235172.a.a ENSGT00940000157185.c.a ENSGT00390000004493 ENSGT00940000154019.a.e.b.a ENSGT00940000154019.a.e.a ENSGT00390000006591.q.a ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b.b ENSGT00390000000970.g ENSGT00940000155368.g.b.b ENSGT00940000159135.e.b ENSGT01100000263515.a.b.a.a.e ##22 ENSGT00390000018660.k.a ENSGT00940000163939.d ENSGT00940000164637.y ENSGT00390000015980.e ENSGT00940000158168.m ENSGT00390000017913.`b.a.a ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a.c ENSGT00940000157637.a.c ENSGT00390000005140.a.p.a ENSGT01030000234621.C.a.b.c ENSGT00940000153798.B.k.b ENSGT00940000160350.i ENSGT01030000234621.C.a.a.b.m Salmoninae_a ANCESTRAL SPECIES 56 ENSGT00940000163991.cb.b.b.b.b ENSGT00940000163991.cb.b.b.a.b.b ENSGT00940000166814 ENSGT00940000165453.f ENSGT01030000235172.a.a ENSGT00940000157185.c.a ENSGT00390000004493 ENSGT00940000154019.a.e.b.a.a ENSGT00390000006591.q.a ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970.g ENSGT00940000155368.g.b.b ENSGT00940000159135.e.b ENSGT00940000159135.f ENSGT01100000263515.a.b.a.a.e ##22 ENSGT00390000018660.k.a ENSGT00940000163939.d ENSGT00940000164637.y ENSGT00390000015980.e ENSGT00940000158168.m ENSGT00390000017913.`b.a.a ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a.c ENSGT00940000157637.a.c ENSGT00390000012340.h.a ENSGT00390000005140.a.p.a ENSGT01030000234621.C.a.b.c ENSGT00940000153798.B.k.b ENSGT00940000160350.i Salmo ANCESTRAL SPECIES 68 ENSGT00940000163991.cb.a.a.a.a.a ENSGT00940000163991.cb.a.a.a.b ENSGT00940000163991.cb.b.a.a.a ENSGT00940000163991.cb.b.b.b.a ENSGT00940000166814 ENSGT00940000165453.f ENSGT00940000157185.c.a ENSGT00390000004493 ENSGT00940000154019.a.e.b.a.a ENSGT00390000006591.q.a ENSGT00940000160473 ENSGT00940000156760.e.b.b ENSGT00390000000970.g ENSGT00940000155368.g.b.b ENSGT00940000159135.e.b ENSGT01100000263515.a.b.a.a.e ##22 ENSGT00390000018660.k.a ENSGT00940000163939.d ENSGT00940000164637.y ENSGT00390000015980.e ENSGT00940000158168.m ENSGT00390000017913.`b.a.a ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a.c ENSGT00940000157637.a.c ENSGT00390000012340.h.a ENSGT00390000005140.a.p.a ENSGT01030000234621.C.a.b.c ENSGT00940000153798.B.k.b ENSGT00940000160350.i River trout MODERN SPECIES 4 olfcu1 (ENSSTUG00000032931) ENSSTUG00000032914 PLCH1 (ENSSTUG00000032901) ENSSTUG00000032880 slc33a1 (ENSSTUG00000032866) gmps (ENSSTUG00000032702) ENSSTUG00000032691 kcnab1a (ENSSTUG00000032680) ssr3 (ENSSTUG00000032661) tiparp (ENSSTUG00000032658) ENSSTUG00000032652 ENSSTUG00000032641 ENSSTUG00000032633 ENSSTUG00000032630 ccnl1a (ENSSTUG00000032525) PTX3 (ENSSTUG00000032489) ##22 veph1 (ENSSTUG00000032474) ENSSTUG00000032464 ENSSTUG00000032421 ENSSTUG00000032402 ENSSTUG00000032380 ENSSTUG00000024848 ENSSTUG00000024304 glod4 (ENSSTUG00000024278) ENSSTUG00000024255 P2RY6 (ENSSTUG00000024244) ENSSTUG00000024238 relt (ENSSTUG00000024230) P2RY2 (ENSSTUG00000024219) ENSSTUG00000024197 ENSSTUG00000024110 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000111539 ENSSSAG00000120572 ENSSSAG00000057354 ENSSSAG00000069170 ENSSSAG00000069182 PLCH1 (ENSSSAG00000120376) ENSSSAG00000088493 c18h3orf33 (ENSSSAG00000069197) slc33a1 (ENSSSAG00000120200) gmps (ENSSSAG00000053700) ENSSSAG00000069209 KCNAB1 (ENSSSAG00000091393) ssr3 (ENSSSAG00000064882) tiparp (ENSSSAG00000068880) ENSSSAG00000068573 ENSSSAG00000092865 ##22 ENSSSAG00000068542 ENSSSAG00000081861 ENSSSAG00000068529 ENSSSAG00000068532 ENSSSAG00000068526 pdcd10a (ENSSSAG00000068498) ENSSSAG00000100476 ENSSSAG00000085561 ENSSSAG00000115384 ENSSSAG00000057876 ENSSSAG00000083043 ENSSSAG00000064152 ENSSSAG00000100135 ENSSSAG00000097274 ENSSSAG00000054738 Oncorhynchus ANCESTRAL SPECIES 115 ENSGT01100000263515.a.b.a.a.e ##22 ENSGT00390000018660.k.a ENSGT00940000163939.c.b ENSGT00940000164637.y ENSGT00940000158168.m ENSGT00390000017913.`b.a.a ENSGT00940000164162 ENSGT00940000158681.a.c ENSGT00940000157637.a.c ENSGT00390000012340.h.a ENSGT00390000005140.a.p.a.b ENSGT01030000234621.C.a.b.c ENSGT00940000153798.B.k.b ENSGT00940000160350.i ENSGT01030000234621.C.a.a.b.m ENSGT00510000046732.A.d.c.a.b Oncorhynchus_a ANCESTRAL SPECIES 335 ENSGT00390000018660.k.a ENSGT01100000263515.a.b.a.a.e ##22 ENSGT00940000163939.c.b ENSGT00940000164637.z.a ENSGT00940000158168.m Coho salmon MODERN SPECIES 9 ccnl1a (ENSOKIG00005004382) ENTPD1 (ENSOKIG00005004543) ENSOKIG00005004591 ENSOKIG00005004599 ENSOKIG00005004643 CHAC2 (ENSOKIG00005004650) ube2d1b (ENSOKIG00005004658) ENSOKIG00005004683 ENSOKIG00005004698 SLITRK3 (ENSOKIG00005004702) ENSOKIG00005004709 ENSOKIG00005004751 ENSOKIG00005004754 ENSOKIG00005004772 VEPH1 (ENSOKIG00005004779) PTX3 (ENSOKIG00005004794) ##22 ENSOKIG00005004803 ENSOKIG00005004816 PDCD10 (ENSOKIG00005004828) PPP2R3A (ENSOKIG00005004946) ENSOKIG00005005549 nceh1a (ENSOKIG00005005565) pccb (ENSOKIG00005005619) STAG1 (ENSOKIG00005006133) ENSOKIG00005008360 ENSOKIG00005008369 ENSOKIG00005008395 ENSOKIG00005008433 ENSOKIG00005008604 ENSOKIG00005008610 ENSOKIG00005008626 Chinook salmon MODERN SPECIES 3065 PTX3 (ENSOTSG00005041070) ##22 Rainbow trout MODERN SPECIES 16 ENSOMYG00000050079 ENSOMYG00000052563 ENSOMYG00000065879 ENSOMYG00000061393 TREH (ENSOMYG00000053286) DDX6 (ENSOMYG00000065010) CXCR5 (ENSOMYG00000036494) ENSOMYG00000064448 bcl9l (ENSOMYG00000052418) cdon (ENSOMYG00000048040) ENSOMYG00000071830 prdm10 (ENSOMYG00000067058) ENSOMYG00000064356 ENSOMYG00000048679 ENSOMYG00000017256 ENSOMYG00000018061 ##22 ENSOMYG00000017227 ENSOMYG00000018042 ENSOMYG00000050638 serpini1 (ENSOMYG00000073649) pdcd10a (ENSOMYG00000068806) ENSOMYG00000050160 ENSOMYG00000053587 ENSOMYG00000049318 ENSOMYG00000059813 ENSOMYG00000065298 ENSOMYG00000077643 ENSOMYG00000067286 ENSOMYG00000040679 ENSOMYG00000041433 ENSOMYG00000069326 Huchen MODERN SPECIES 2257 ENSHHUG00000046623 PTX3 (ENSHHUG00000046608) ##22 veph1 (ENSHHUG00000046578) ENSHHUG00000046575 ENSHHUG00000046567 ENSHHUG00000046560 Salmoninae ANCESTRAL SPECIES 441 ENSGT00940000156760.e.b.a ENSGT00390000000970.h ENSGT00940000155368.g.b.a ENSGT00940000162647 ENSGT01030000235461 ENSGT00940000159135.e.a ENSGT01100000263515.a.b.a.a.f ##22 ENSGT00390000018660.k.b ENSGT00940000163939.c.a ENSGT00940000164637.z.b ENSGT00390000015980.f ENSGT00940000158168.n ENSGT00390000017913.`b.a.b ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000158681.a.d ENSGT00940000157637.a.d ENSGT00390000005140.a.p.b ENSGT01030000234621.C.a.b.d ENSGT00940000153798.B.k.a.a ENSGT00940000160350.j ENSGT01030000234621.C.a.a.b.n Huchen MODERN SPECIES 7335 PTX3 (ENSHHUG00000019093) ##22 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000162782.k.a.b.b.a ENSGT00940000162782.k.a.a ENSGT00940000162782.k.a.b.a ENSGT00940000165453.e ENSGT01030000235172.a.b ENSGT00940000157185.c.b ENSGT00940000154019.a.e.b.b ENSGT00390000006591.q.b ENSGT00940000163711.b.d ENSGT00940000156760.e.b.a ENSGT00390000000970.h ENSGT00940000155368.g.b.a ENSGT00940000162647 ENSGT01030000235461 ENSGT00940000159135.e.a ENSGT01100000263515.a.b.a.a.f ##22 ENSGT00390000018660.k.b ENSGT00940000163939.c.a ENSGT00940000164637.z.b ENSGT00390000015980.f ENSGT00940000158168.n ENSGT00390000017913.`b.a.b ENSGT00940000160751 ENSGT00940000158681.a.d ENSGT00940000157637.a.d ENSGT00390000005140.a.p.b ENSGT01030000234621.C.a.b.d ENSGT00940000153798.B.k.a.a ENSGT00940000160350.j ENSGT01030000234621.C.a.a.b.n ENSGT00510000046732.A.d.d Oncorhynchus ANCESTRAL SPECIES 14 ENSGT01100000263565.b.a.b.b.b.z.b.a ENSGT01100000263565.b.a.b.b.b.z.a ENSGT00940000162782.k.a.b.b.a ENSGT00940000162782.k.a.a.a ENSGT00940000162782.k.a.a.b ENSGT00940000162782.k.a.b.a ENSGT00940000165453.e ENSGT00940000157185.c.b ENSGT00940000154019.a.e.b.b ENSGT00390000006591.q.b ENSGT00940000163711.b.d ENSGT00390000000970.h ENSGT00940000155368.g.b.a ENSGT01100000264189 ENSGT00940000159135.f ENSGT01100000263515.a.b.a.a.f ##22 ENSGT00390000018660.k.b ENSGT00940000163939.c.a ENSGT00940000164637.z.b ENSGT00390000015980.f ENSGT00940000158168.n ENSGT00390000017913.`b.a.b ENSGT00940000160751 ENSGT00940000158681.a.d ENSGT00940000157637.a.d ENSGT00390000005140.a.p.a.a.a ENSGT01030000234621.C.a.b.d ENSGT00940000153798.B.k.a.a ENSGT00940000160350.j ENSGT01030000234621.C.a.a.b.n ENSGT00510000046732.A.d.d Oncorhynchus_a ANCESTRAL SPECIES 67 ENSGT01100000263565.b.a.b.b.b.z.a ENSGT01100000263565.b.a.b.b.b.z.b.b ENSGT00940000162782.k.b ENSGT00940000162782.k.a.a.a ENSGT00940000162782.k.a.a.b ENSGT00940000162782.k.a.b.a ENSGT00940000165453.e ENSGT00940000157185.c.b ENSGT00940000154019.a.e.b.b ENSGT00390000006591.q.b ENSGT00940000163711.b.d ENSGT00390000000970.h ENSGT00940000155368.g.b.a ENSGT01100000264189 ENSGT00940000159135.f ENSGT01100000263515.a.b.a.a.f ##22 ENSGT00390000018660.k.b ENSGT00940000163939.c.a ENSGT00940000164637.z.b ENSGT00390000015980.f ENSGT00940000158168.n ENSGT00390000017913.`b.a.b ENSGT00940000160751 ENSGT00940000158681.a.d ENSGT00390000005140.a.p.a.a.a ENSGT01030000234621.C.a.b.d ENSGT00940000153798.B.k.a.b ENSGT00940000153798.B.k.a.a ENSGT00940000160350.j ENSGT01030000234621.C.a.a.b.n ENSGT00510000046732.A.d.d Chinook salmon MODERN SPECIES 2923 ENSOTSG00005045383 dab1a (ENSOTSG00005045384) PTX3 (ENSOTSG00005045385) ##22 ENSOTSG00005045387 ENSOTSG00005045388 ENSOTSG00005045391 ENSOTSG00005045392 ENSOTSG00005045395 serpini1 (ENSOTSG00005045397) pdcd10a (ENSOTSG00005045398) WDR49 (ENSOTSG00005045412) dusp1 (ENSOTSG00005045413) nat15 (ENSOTSG00005045414) ENSOTSG00005045415 Coho salmon MODERN SPECIES 6 ENSOKIG00005037596 ENSOKIG00005037546 ENSOKIG00005037408 ENSOKIG00005037386 olfcq3 (ENSOKIG00005037186) ENSOKIG00005037147 PLCH1 (ENSOKIG00005035283) slc33a1 (ENSOKIG00005035049) ENSOKIG00005035032 gmps (ENSOKIG00005034709) ENSOKIG00005034661 ssr3 (ENSOKIG00005034626) TIPARP (ENSOKIG00005034619) ENSOKIG00005034609 CCNL1 (ENSOKIG00005034490) PTX3 (ENSOKIG00005034478) ##22 veph1 (ENSOKIG00005034444) ENSOKIG00005034432 ENSOKIG00005034396 ENSOKIG00005034366 ENSOKIG00005034349 serpini1 (ENSOKIG00005034333) pdcd10a (ENSOKIG00005034270) WDR49 (ENSOKIG00005034254) ENSOKIG00005034241 SLITRK3 (ENSOKIG00005034226) ENSOKIG00005034221 ENSOKIG00005017643 P2RY6 (ENSOKIG00005017626) ENSOKIG00005017615 ARHGEF17 (ENSOKIG00005017556) Rainbow trout MODERN SPECIES 19 ENSOMYG00000042599 PLCH1 (ENSOMYG00000042590) slc33a1 (ENSOMYG00000041790) gmps (ENSOMYG00000041845) ENSOMYG00000042557 ENSOMYG00000065407 ENSOMYG00000042567 kcnab1a (ENSOMYG00000056647) ssr3 (ENSOMYG00000041781) tiparp (ENSOMYG00000041777) ENSOMYG00000068394 ENSOMYG00000074757 ENSOMYG00000041775 ENSOMYG00000041747 ENSOMYG00000055378 PTX3 (ENSOMYG00000041693) ##22 ENSOMYG00000073677 ENSOMYG00000041711 ENSOMYG00000041721 ENSOMYG00000070997 serpini1 (ENSOMYG00000028083) pdcd10a (ENSOMYG00000041678) WDR49 (ENSOMYG00000075748) ENSOMYG00000077174 ENSOMYG00000037246 ENSOMYG00000037249 ENSOMYG00000059371 ENSOMYG00000041644 P2RY6 (ENSOMYG00000041638) ENSOMYG00000041633 relt (ENSOMYG00000052883) Salmo ANCESTRAL SPECIES 7 ENSGT00940000162782.k.a.a.c ENSGT00940000162782.k.a.b.b.a ENSGT00940000162782.k.a.a.d ENSGT00940000162782.k.a.b.a ENSGT00940000165453.e ENSGT00940000157185.c.b ENSGT00940000154019.a.e.b.b ENSGT00390000006591.q.b ENSGT00940000163711.b.d ENSGT00940000156760.e.b.a ENSGT00390000000970.h ENSGT00940000155368.g.b.a ENSGT00940000162647 ENSGT01030000235461 ENSGT00940000159135.e.a ENSGT01100000263515.a.b.a.a.f ##22 ENSGT00390000018660.k.b ENSGT00940000163939.c.a ENSGT00940000164637.z.b ENSGT00390000015980.f ENSGT00940000158168.n ENSGT00390000017913.`b.a.b ENSGT00940000171284 ENSGT00940000158681.a.d ENSGT00940000157637.a.d ENSGT00390000005140.a.p.b ENSGT01030000234621.C.a.b.d ENSGT00940000153798.B.k.a.a ENSGT00940000160350.j ENSGT01030000234621.C.a.a.b.n ENSGT00940000163454.a.b River trout MODERN SPECIES 18 ENSSTUG00000005968 ENSSTUG00000005870 ENSSTUG00000005745 ENSSTUG00000005727 ENSSTUG00000005436 ENSSTUG00000005376 PLCH1 (ENSSTUG00000005353) slc33a1 (ENSSTUG00000005330) gmps (ENSSTUG00000004555) ENSSTUG00000004380 KCNAB1 (ENSSTUG00000003840) ssr3 (ENSSTUG00000003797) tiparp (ENSSTUG00000003778) ENSSTUG00000031190 ccnl1a (ENSSTUG00000030830) PTX3 (ENSSTUG00000030821) ##22 veph1 (ENSSTUG00000030740) ENSSTUG00000030729 ENSSTUG00000030718 ENSSTUG00000030713 serpini1 (ENSSTUG00000030672) ENSSTUG00000030658 ENSSTUG00000030632 ENSSTUG00000030625 SLITRK3 (ENSSTUG00000030621) ENSSTUG00000030571 ENSSTUG00000030534 P2RY6 (ENSSTUG00000030529) ARHGEF17 (ENSSTUG00000030450) relt (ENSSTUG00000030431) P2RY2 (ENSSTUG00000030427) Atlantic salmon MODERN SPECIES 12 ENSSSAG00000103266 ENSSSAG00000086477 ENSSSAG00000067527 ENSSSAG00000067517 PLCH1 (ENSSSAG00000117478) ENSSSAG00000117834 slc33a1 (ENSSSAG00000110382) gmps (ENSSSAG00000064976) ENSSSAG00000065079 KCNAB1 (ENSSSAG00000121470) ssr3 (ENSSSAG00000068881) tiparp (ENSSSAG00000064878) ENSSSAG00000064866 ENSSSAG00000064825 ENSSSAG00000064762 PTX3 (ENSSSAG00000088405) ##22 ENSSSAG00000085048 ENSSSAG00000064807 ENSSSAG00000064803 ENSSSAG00000086101 neus (ENSSSAG00000064781) pdcd10a (ENSSSAG00000064765) WDR49 (ENSSSAG00000064639) ENSSSAG00000106508 ENSSSAG00000119050 ENSSSAG00000064704 ENSSSAG00000114560 P2RY6 (ENSSSAG00000064689) ENSSSAG00000064666 relt (ENSSSAG00000113482) ENSSSAG00000096657 Northern pike MODERN SPECIES olfcu1 (ENSELUG00000011382) olfcq3 (ENSELUG00000011328) ENSELUG00000011279 ENSELUG00000008970 PLCH1 (ENSELUG00000008909) c18h3orf33 (ENSELUG00000025667) ENSELUG00000027243 slc33a1 (ENSELUG00000008801) gmps (ENSELUG00000008772) ENSELUG00000008754 KCNAB1 (ENSELUG00000000328) ssr3 (ENSELUG00000024805) tiparp (ENSELUG00000008647) ENSELUG00000000325 ccnl1a (ENSELUG00000008590) PTX3 (ENSELUG00000008512) ##22 veph1 (ENSELUG00000008539) ENSELUG00000008503 ENSELUG00000008467 ENSELUG00000008268 serpini1 (ENSELUG00000008391) pdcd10 (ENSELUG00000030314) WDR49 (ENSELUG00000008135) ENSELUG00000008097 ENSELUG00000029664 ENSELUG00000028182 ENSELUG00000010273 ENSELUG00000001137 SLITRK3 (ENSELUG00000028790) ENSELUG00000028242 ENSELUG00000033472 Acanthomorphata ANCESTRAL SPECIES 37 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00940000167407 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a Cod MODERN SPECIES 7 ENSGMOG00000036534 ENSGMOG00000008806 bace2 (ENSGMOG00000008848) ENSGMOG00000008875 ENSGMOG00000035807 vmp1 (ENSGMOG00000008975) ENSGMOG00000008987 rps6kb1b (ENSGMOG00000008995) slc33a1 (ENSGMOG00000009015) gmps (ENSGMOG00000009029) ENSGMOG00000009045 KCNAB1 (ENSGMOG00000009066) ssr3 (ENSGMOG00000009082) tiparp (ENSGMOG00000034698) ENSGMOG00000009099 PTX3 (ENSGMOG00000025297) ##22 ENSGMOG00000009109 ENSGMOG00000027732 ENSGMOG00000030358 ENSGMOG00000009158 ENSGMOG00000007093 ENSGMOG00000016151 ENSGMOG00000004207 ENSGMOG00000015041 ENSGMOG00000014938 ENSGMOG00000029739 pdcd10a (ENSGMOG00000000725) ENSGMOG00000000710 ENSGMOG00000028393 ENSGMOG00000008516 ENSGMOG00000036591 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a Pinecone sodierfish MODERN SPECIES 4 ATM (ENSMMDG00005012316) ENSMMDG00005013525 vmp1 (ENSMMDG00005013529) tubd1 (ENSMMDG00005013533) RPS6KB1 (ENSMMDG00005013554) slc33a1 (ENSMMDG00005016008) gmps (ENSMMDG00005016018) ENSMMDG00005017131 kcnab1a (ENSMMDG00005017454) ssr3 (ENSMMDG00005017456) TIPARP (ENSMMDG00005017457) ENSMMDG00005017459 ENSMMDG00005017461 ccnl1a (ENSMMDG00005017462) veph1 (ENSMMDG00005017493) PTX3 (ENSMMDG00005017497) ##22 ENSMMDG00005017513 ENSMMDG00005017514 ENSMMDG00005017516 ENSMMDG00005017519 serpini1 (ENSMMDG00005017521) pdcd10a (ENSMMDG00005017522) ENSMMDG00005017529 ENSMMDG00005017531 ENSMMDG00005017534 ENSMMDG00005017537 ENSMMDG00005017541 SLITRK3 (ENSMMDG00005017546) ENSMMDG00005017557 scn2b (ENSMMDG00005017663) SCN4B (ENSMMDG00005017668) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b Tiger tail seahorse MODERN SPECIES 111 ENSHCOG00000011572 ENSHCOG00000011601 ENSHCOG00000011606 vmp1 (ENSHCOG00000011637) tubd1 (ENSHCOG00000011655) rps6kb1b (ENSHCOG00000011708) slc33a1 (ENSHCOG00000011734) gmps (ENSHCOG00000011768) ENSHCOG00000011815 kcnab1a (ENSHCOG00000011840) KCNAB1 (ENSHCOG00000011865) ssr3 (ENSHCOG00000011884) TIPARP (ENSHCOG00000011891) ENSHCOG00000011900 ccnl1a (ENSHCOG00000011929) PTX3 (ENSHCOG00000011996) ##22 veph1 (ENSHCOG00000012032) ENSHCOG00000012043 ENSHCOG00000012055 serpini1 (ENSHCOG00000012118) pdcd10a (ENSHCOG00000012152) ENSHCOG00000012174 ENSHCOG00000012186 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Tetraodontidae ANCESTRAL SPECIES 42 ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591.p ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000157637.a.n.b ENSGT00940000158681.a ENSGT00940000157637.a.n.a ENSGT00940000157637.a.m ENSGT01030000234556.b.b.b Tetraodon MODERN SPECIES 26 wdr26b (ENSTNIG00000018614) fez2b (ENSTNIG00000018615) esrrgb (ENSTNIG00000017713) st8sia2 (ENSTNIG00000018616) ENSTNIG00000018617 ppp1r3ca (ENSTNIG00000018618) ENSTNIG00000018656 cdk9 (ENSTNIG00000018657) ENSTNIG00000018680 adob (ENSTNIG00000018681) EGR2 (ENSTNIG00000018682) kif11 (ENSTNIG00000018683) slc22a15 (ENSTNIG00000018684) ENSTNIG00000018685 cyp26c1 (ENSTNIG00000018686) PTX3 (ENSTNIG00000018691) ##22 ENSTNIG00000018692 ENSTNIG00000018693 ENSTNIG00000018694 serpini1 (ENSTNIG00000018695) ENSTNIG00000000272 cnot1 (ENSTNIG00000018706) bbs2 (ENSTNIG00000018707) ENSTNIG00000003484 ADAM11 (ENSTNIG00000019372) ENSTNIG00000019374 FUT7 (ENSTNIG00000019375) niban2b (ENSTNIG00000019376) BICC1 (ENSTNIG00000017029) ENSTNIG00000019378 ENSTNIG00000019379 Fugu MODERN SPECIES 2 bace2 (ENSTRUG00000002469) TMPRSS2 (ENSTRUG00000002768) ATM (ENSTRUG00000030407) ENSTRUG00000023256 vmp1 (ENSTRUG00000005028) tubd1 (ENSTRUG00000005354) rps6kb1b (ENSTRUG00000005648) slc33a1 (ENSTRUG00000006020) gmps (ENSTRUG00000006141) ENSTRUG00000006589 KCNAB1 (ENSTRUG00000007233) ssr3 (ENSTRUG00000021463) TIPARP (ENSTRUG00000022644) ccnl1a (ENSTRUG00000012879) veph1 (ENSTRUG00000026457) ptx3 (ENSTRUG00000027736) ##22 ENSTRUG00000012672 ENSTRUG00000012663 serpini1 (ENSTRUG00000012444) ENSTRUG00000028082 ENSTRUG00000001552 ENSTRUG00000026202 ENSTRUG00000033099 ENSTRUG00000032226 ENSTRUG00000027051 ENSTRUG00000001673 SLITRK3 (ENSTRUG00000030858) ENSTRUG00000005267 ENSTRUG00000005322 SCN4B (ENSTRUG00000001355) ENSTRUG00000028826 Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000171284 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Ballan wrasse MODERN SPECIES 187 bace2 (ENSLBEG00000012380) ENSLBEG00000012284 ATM (ENSLBEG00000012075) ENSLBEG00000011976 vmp1 (ENSLBEG00000011931) tubd1 (ENSLBEG00000011893) rps6kb1b (ENSLBEG00000011832) slc33a1 (ENSLBEG00000011762) gmps (ENSLBEG00000011676) ENSLBEG00000011623 KCNAB1 (ENSLBEG00000011567) ssr3 (ENSLBEG00000011529) TIPARP (ENSLBEG00000011510) ENSLBEG00000011488 ccnl1a (ENSLBEG00000011423) PTX3 (ENSLBEG00000011385) ##22 veph1 (ENSLBEG00000011336) ENSLBEG00000011295 ENSLBEG00000011230 ENSLBEG00000011193 serpini1 (ENSLBEG00000011139) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A Gilthead seabream MODERN SPECIES 11 ENSSAUG00010004041 ATM (ENSSAUG00010024686) ENSSAUG00010024677 vmp1 (ENSSAUG00010024671) tubd1 (ENSSAUG00010024666) rps6kb1b (ENSSAUG00010024586) slc33a1 (ENSSAUG00010024579) gmps (ENSSAUG00010024081) ENSSAUG00010024068 KCNAB1 (ENSSAUG00010024065) ssr3 (ENSSAUG00010024063) TIPARP (ENSSAUG00010024062) ENSSAUG00010024059 ccnl1a (ENSSAUG00010024057) ENSSAUG00010024054 PTX3 (ENSSAUG00010024052) ##22 veph1 (ENSSAUG00010024046) ENSSAUG00010024042 ENSSAUG00010024040 ENSSAUG00010024038 serpini1 (ENSSAUG00010024035) pdcd10a (ENSSAUG00010024031) WDR49 (ENSSAUG00010024025) ENSSAUG00010024020 ENSSAUG00010021902 SLITRK3 (ENSSAUG00010021853) ENSSAUG00010021851 scn2b (ENSSAUG00010021847) SCN4B (ENSSAUG00010021844) MECOM (ENSSAUG00010021758) ENSSAUG00010021742 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A European seabass MODERN SPECIES 3 ENSDLAG00005015906 ENSDLAG00005015958 ENSDLAG00005034756 vmp1 (ENSDLAG00005000095) ENSDLAG00005000199 rps6kb1b (ENSDLAG00005000265) slc33a1 (ENSDLAG00005000369) gmps (ENSDLAG00005000390) ENSDLAG00005000541 kcnab1a (ENSDLAG00005033535) ssr3 (ENSDLAG00005034114) TIPARP (ENSDLAG00005000653) ENSDLAG00005029556 ENSDLAG00005000662 VEPH1 (ENSDLAG00005000686) ENSDLAG00005028846 ##22 ENSDLAG00005031780 ENSDLAG00005000713 ENSDLAG00005000719 serpini1 (ENSDLAG00005000720) pdcd10a (ENSDLAG00005000725) WDR49 (ENSDLAG00005000733) ENSDLAG00005034010 ENSDLAG00005000751 ENSDLAG00005035047 ENSDLAG00005000891 ENSDLAG00005000896 ENSDLAG00005033504 ENSDLAG00005000898 ENSDLAG00005000901 ENSDLAG00005000910 Large yellow croaker MODERN SPECIES 479 bace2 (ENSLCRG00005004486) ENSLCRG00005004478 ATM (ENSLCRG00005002491) ENSLCRG00005020210 vmp1 (ENSLCRG00005020202) tubd1 (ENSLCRG00005020200) rps6kb1b (ENSLCRG00005020043) slc33a1 (ENSLCRG00005020034) gmps (ENSLCRG00005019918) ENSLCRG00005019917 KCNAB1 (ENSLCRG00005019456) ssr3 (ENSLCRG00005019439) TIPARP (ENSLCRG00005019437) ENSLCRG00005019436 ccnl1a (ENSLCRG00005019432) PTX3 (ENSLCRG00005019431) ##22 veph1 (ENSLCRG00005019426) ENSLCRG00005019425 ENSLCRG00005019422 ENSLCRG00005019419 serpini1 (ENSLCRG00005019413) pdcd10a (ENSLCRG00005019412) ENSLCRG00005019411 ENSLCRG00005019408 ENSLCRG00005018027 SLITRK3 (ENSLCRG00005017979) ENSLCRG00005017974 ENSLCRG00005017972 SCN4B (ENSLCRG00005017971) MECOM (ENSLCRG00005017320) ENSLCRG00005017318 Perciformes ANCESTRAL SPECIES 10 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Cottioidei ANCESTRAL SPECIES 4 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Lumpfish MODERN SPECIES 4 bace2 (ENSCLMG00005004602) ENSCLMG00005004592 ATM (ENSCLMG00005004417) ENSCLMG00005004360 vmp1 (ENSCLMG00005004248) tubd1 (ENSCLMG00005004241) rps6kb1b (ENSCLMG00005002261) slc33a1 (ENSCLMG00005002225) gmps (ENSCLMG00005001830) ENSCLMG00005001666 kcnab1a (ENSCLMG00005001395) ssr3 (ENSCLMG00005001348) TIPARP (ENSCLMG00005014365) ENSCLMG00005014363 ccnl1a (ENSCLMG00005014288) PTX3 (ENSCLMG00005014275) ##22 veph1 (ENSCLMG00005014271) ENSCLMG00005014270 ENSCLMG00005014269 ENSCLMG00005014268 serpini1 (ENSCLMG00005014267) pdcd10a (ENSCLMG00005014266) WDR49 (ENSCLMG00005014262) ENSCLMG00005014260 ENSCLMG00005014254 SLITRK3 (ENSCLMG00005014241) ENSCLMG00005014170 ENSCLMG00005014165 ENSCLMG00005014163 scn2b (ENSCLMG00005014162) SCN4B (ENSCLMG00005014156) Stickleback MODERN SPECIES ENSGACG00000006998 ENSGACG00000007005 ENSGACG00000007008 vmp1 (ENSGACG00000007009) tubd1 (ENSGACG00000007016) RPS6KB1 (ENSGACG00000007027) slc33a1 (ENSGACG00000007046) gmps (ENSGACG00000007053) ENSGACG00000007060 kcnab1a (ENSGACG00000007068) ssr3 (ENSGACG00000007071) ENSGACG00000007093 TIPARP (ENSGACG00000007095) ccnl1a (ENSGACG00000007101) veph1 (ENSGACG00000007117) PTX3 (ENSGACG00000007125) ##22 ENSGACG00000007140 ENSGACG00000007144 serpini1 (ENSGACG00000007161) pdcd10a (ENSGACG00000007171) ENSGACG00000007177 ENSGACG00000007181 SLITRK3 (ENSGACG00000007226) ENSGACG00000007228 ENSGACG00000007230 scn2b (ENSGACG00000007267) SCN4B (ENSGACG00000007272) ENSGACG00000007274 MECOM (ENSGACG00000007276) megf6 (ENSGACG00000007302) ENSGACG00000007320 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Pike perch MODERN SPECIES 86 TMPRSS2 (ENSSLUG00000020078) ATM (ENSSLUG00000020095) ENSSLUG00000020122 vmp1 (ENSSLUG00000020129) tubd1 (ENSSLUG00000020130) RPS6KB1 (ENSSLUG00000020145) slc33a1 (ENSSLUG00000020198) gmps (ENSSLUG00000020209) ENSSLUG00000020247 kcnab1a (ENSSLUG00000020259) ssr3 (ENSSLUG00000020275) TIPARP (ENSSLUG00000020290) ENSSLUG00000020303 ccnl1a (ENSSLUG00000020315) veph1 (ENSSLUG00000020479) PTX3 (ENSSLUG00000020564) ##22 ENSSLUG00000020566 ENSSLUG00000020572 ENSSLUG00000020582 serpini1 (ENSSLUG00000020595) pdcd10a (ENSSLUG00000020663) ENSSLUG00000020682 ENSSLUG00000020686 ENSSLUG00000020694 Channel bull blenny MODERN SPECIES 4 bace2 (ENSCGOG00000010192) ENSCGOG00000010187 ENSCGOG00000010186 ATM (ENSCGOG00000009803) ENSCGOG00000009762 vmp1 (ENSCGOG00000009611) tubd1 (ENSCGOG00000009591) rps6kb1b (ENSCGOG00000007441) slc33a1 (ENSCGOG00000007409) gmps (ENSCGOG00000006633) ENSCGOG00000006594 ssr3 (ENSCGOG00000006585) TIPARP (ENSCGOG00000006581) ENSCGOG00000006572 ccnl1a (ENSCGOG00000006520) PTX3 (ENSCGOG00000006518) ##22 veph1 (ENSCGOG00000006443) ENSCGOG00000006431 ENSCGOG00000006429 ENSCGOG00000006427 serpini1 (ENSCGOG00000006326) pdcd10a (ENSCGOG00000006318) ENSCGOG00000006314 ENSCGOG00000006312 ENSCGOG00000004536 SLITRK3 (ENSCGOG00000004453) ENSCGOG00000004137 ENSCGOG00000004090 SCN4B (ENSCGOG00000004072) MECOM (ENSCGOG00000019626) ENSCGOG00000019623 Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000159256.o Turbot MODERN SPECIES 15 CAPN5 (ENSSMAG00000020557) myo7aa (ENSSMAG00000020546) ENSSMAG00000020537 pak1 (ENSSMAG00000020499) aqp11 (ENSSMAG00000020497) clns1a (ENSSMAG00000020496) ENSSMAG00000020495 gmps (ENSSMAG00000020489) ENSSMAG00000020488 kcnab1a (ENSSMAG00000020485) ssr3 (ENSSMAG00000023871) TIPARP (ENSSMAG00000020479) ENSSMAG00000022648 ENSSMAG00000029670 ENSSMAG00000020476 PTX3 (ENSSMAG00000020473) ##22 ENSSMAG00000020466 ENSSMAG00000020463 ENSSMAG00000020457 ENSSMAG00000029459 serpini1 (ENSSMAG00000020441) pdcd10a (ENSSMAG00000020433) WDR49 (ENSSMAG00000020428) ENSSMAG00000024061 ENSSMAG00000020408 ENSSMAG00000020398 ENSSMAG00000020396 ENSSMAG00000020387 ENSSMAG00000020386 ENSSMAG00000020343 ENSSMAG00000020341 Tongue sole MODERN SPECIES 14 ENSCSEG00000002045 ATM (ENSCSEG00000002010) ENSCSEG00000002004 vmp1 (ENSCSEG00000001998) tubd1 (ENSCSEG00000001994) rps6kb1b (ENSCSEG00000001890) slc33a1 (ENSCSEG00000001853) gmps (ENSCSEG00000001844) ENSCSEG00000001836 kcnab1a (ENSCSEG00000001804) ssr3 (ENSCSEG00000001801) TIPARP (ENSCSEG00000001795) ENSCSEG00000001792 ENSCSEG00000001790 ccnl1a (ENSCSEG00000001787) PTX3 (ENSCSEG00000001784) ##22 veph1 (ENSCSEG00000001780) ENSCSEG00000001775 ENSCSEG00000001772 ENSCSEG00000001766 serpini1 (ENSCSEG00000001765) pdcd10a (ENSCSEG00000001759) WDR49 (ENSCSEG00000001755) ENSCSEG00000001751 ENSCSEG00000001746 ENSCSEG00000001727 SLITRK3 (ENSCSEG00000001724) scn2b (ENSCSEG00000001716) SCN4B (ENSCSEG00000001697) MECOM (ENSCSEG00000001678) ENSCSEG00000001675 Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Seriola ANCESTRAL SPECIES 107 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a Greater amberjack MODERN SPECIES 263 ENSSDUG00000011401 ATM (ENSSDUG00000011432) ENSSDUG00000011642 vmp1 (ENSSDUG00000011759) tubd1 (ENSSDUG00000011791) rps6kb1b (ENSSDUG00000011826) slc33a1 (ENSSDUG00000011921) gmps (ENSSDUG00000011961) ENSSDUG00000012007 kcnab1a (ENSSDUG00000012041) ssr3 (ENSSDUG00000012065) TIPARP (ENSSDUG00000012080) ENSSDUG00000012089 ccnl1a (ENSSDUG00000012095) veph1 (ENSSDUG00000012112) PTX3 (ENSSDUG00000012167) ##22 ENSSDUG00000012207 ENSSDUG00000012221 ENSSDUG00000012238 ENSSDUG00000012271 serpini1 (ENSSDUG00000012287) pdcd10a (ENSSDUG00000012325) ENSSDUG00000012366 Yellowtail amberjack MODERN SPECIES 2578 PTX3 (ENSSLDG00000012805) ##22 veph1 (ENSSLDG00000012700) ENSSLDG00000012670 ENSSLDG00000012638 ENSSLDG00000012619 serpini1 (ENSSLDG00000012594) pdcd10a (ENSSLDG00000012561) WDR49 (ENSSLDG00000012524) ENSSLDG00000012496 ENSSLDG00000012431 ENSSLDG00000012377 SLITRK3 (ENSSLDG00000012363) ENSSLDG00000012339 scn2b (ENSSLDG00000012310) Barramundi perch MODERN SPECIES 181 PTX3 (ENSLCAG00010015932) ##22 veph1 (ENSLCAG00010015923) ENSLCAG00010015918 ENSLCAG00010015914 ENSLCAG00010015905 ENSLCAG00010015900 serpini1 (ENSLCAG00010015896) pdcd10a (ENSLCAG00010015883) WDR49 (ENSLCAG00010015871) ENSLCAG00010015850 ENSLCAG00010015740 SLITRK3 (ENSLCAG00010015720) ENSLCAG00010015712 ENSLCAG00010015707 ENSLCAG00010015691 scn2b (ENSLCAG00010015673) Anabantaria ANCESTRAL SPECIES 9 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o Zig-zag eel MODERN SPECIES 4 bace2 (ENSMAMG00000003518) ENSMAMG00000003551 ENSMAMG00000003763 vmp1 (ENSMAMG00000003783) ENSMAMG00000003847 rps6kb1b (ENSMAMG00000003898) slc33a1 (ENSMAMG00000003947) gmps (ENSMAMG00000003973) KCNAB1 (ENSMAMG00000004062) ssr3 (ENSMAMG00000027905) TIPARP (ENSMAMG00000004108) ENSMAMG00000004117 ENSMAMG00000004139 ENSMAMG00000004160 VEPH1 (ENSMAMG00000004227) ENSMAMG00000025628 ##22 ENSMAMG00000004259 ENSMAMG00000004283 serpini1 (ENSMAMG00000004322) pdcd10a (ENSMAMG00000004345) ENSMAMG00000004378 ENSMAMG00000004478 ENSMAMG00000028088 ENSMAMG00000004512 ENSMAMG00000004589 ENSMAMG00000004598 ENSMAMG00000028460 ENSMAMG00000004625 ENSMAMG00000004665 ENSMAMG00000004770 ENSMAMG00000027909 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637.w ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A Siamese fighting fish MODERN SPECIES 4 sh3bgr (ENSBSLG00000024644) PCP4 (ENSBSLG00000024632) DSCAM (ENSBSLG00000024564) bace2 (ENSBSLG00000024512) ATM (ENSBSLG00000024399) ENSBSLG00000024388 vmp1 (ENSBSLG00000024375) tubd1 (ENSBSLG00000024370) rps6kb1b (ENSBSLG00000023815) slc33a1 (ENSBSLG00000023790) gmps (ENSBSLG00000023613) KCNAB1 (ENSBSLG00000023499) ssr3 (ENSBSLG00000023464) TIPARP (ENSBSLG00000023451) ccnl1a (ENSBSLG00000023262) PTX3 (ENSBSLG00000023245) ##22 veph1 (ENSBSLG00000023219) ENSBSLG00000023217 ENSBSLG00000023207 pdcd10a (ENSBSLG00000023205) ENSBSLG00000023203 ENSBSLG00000023190 ENSBSLG00000023182 ENSBSLG00000023129 ENSBSLG00000023114 serpini1 (ENSBSLG00000022935) pdcd10a (ENSBSLG00000022868) ENSBSLG00000022833 ENSBSLG00000022797 ENSBSLG00000021610 SLITRK3 (ENSBSLG00000021573) Climbing perch MODERN SPECIES 4 ENSATEG00000001528 bace2 (ENSATEG00000001688) ENSATEG00000001745 ENSATEG00000002259 vmp1 (ENSATEG00000002271) ENSATEG00000002282 rps6kb1b (ENSATEG00000002322) slc33a1 (ENSATEG00000002379) gmps (ENSATEG00000002414) ENSATEG00000002487 kcnab1a (ENSATEG00000002685) ssr3 (ENSATEG00000002923) TIPARP (ENSATEG00000002945) ENSATEG00000002998 VEPH1 (ENSATEG00000003338) ENSATEG00000003353 ##22 ENSATEG00000003367 ENSATEG00000003384 ENSATEG00000003399 ENSATEG00000003428 serpini1 (ENSATEG00000003455) pdcd10a (ENSATEG00000028772) ENSATEG00000003486 ENSATEG00000029835 ENSATEG00000003613 ENSATEG00000003818 ENSATEG00000003832 ENSATEG00000003837 ENSATEG00000003940 ENSATEG00000004035 ENSATEG00000004166 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 ENSGT00940000156971.A Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00940000163043 ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o Aplocheiloidei ANCESTRAL SPECIES 50 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l Mangrove rivulus MODERN SPECIES 51 bace2 (ENSKMAG00000000463) ENSKMAG00000000451 ENSKMAG00000000424 ENSKMAG00000000398 ENSKMAG00000000385 vmp1 (ENSKMAG00000000301) tubd1 (ENSKMAG00000000289) rps6kb1b (ENSKMAG00000000145) slc33a1 (ENSKMAG00000020878) gmps (ENSKMAG00000020846) ENSKMAG00000020819 KCNAB1 (ENSKMAG00000020762) ssr3 (ENSKMAG00000020716) TIPARP (ENSKMAG00000020703) ccnl1a (ENSKMAG00000020652) PTX3 (ENSKMAG00000020630) ##22 veph1 (ENSKMAG00000020613) Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015015573 ENSNFUG00015015567 bace2 (ENSNFUG00015015535) Nfu_g_1_000287 (ENSNFUG00015015419) ENSNFUG00015015401 VMP1 (ENSNFUG00015015209) TUBD1 (ENSNFUG00015015119) ENSNFUG00015015086 rps6kb1b (ENSNFUG00015014003) SLC33A1 (ENSNFUG00015013943) GMPS (ENSNFUG00015013903) ENSNFUG00015013867 ccnl1a (ENSNFUG00015013461) ENSNFUG00015013420 ENSNFUG00015013416 PTX3 (ENSNFUG00015013412) ##22 VEPH (ENSNFUG00015013400) ENSNFUG00015013390 SMIM8 (ENSNFUG00015013382) DDX51 (ENSNFUG00015013353) ENSNFUG00015013344 ENSNFUG00015013333 CABZ01080599.1 (ENSNFUG00015013324) ENSNFUG00015013321 SERPINI1 (ENSNFUG00015013297) ENSNFUG00015013290 ENSNFUG00015013288 ENSNFUG00015013280 ENSNFUG00015013277 ENSNFUG00015013276 ENSNFUG00015013274 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00940000167407 ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o NAME_4 ANCESTRAL SPECIES 48 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000159256.o ENSGT00940000156971.A ENSGT00390000009776.o Mummichog MODERN SPECIES 2337 ENSFHEG00000022763 ENSFHEG00000022784 ENSFHEG00000022810 ENSFHEG00000022823 vmp1 (ENSFHEG00000022833) tubd1 (ENSFHEG00000022865) rps6kb1b (ENSFHEG00000022944) slc33a1 (ENSFHEG00000022958) gmps (ENSFHEG00000023029) ENSFHEG00000023083 KCNAB1 (ENSFHEG00000023223) ssr3 (ENSFHEG00000001489) TIPARP (ENSFHEG00000001493) ENSFHEG00000001495 ccnl1a (ENSFHEG00000000052) PTX3 (ENSFHEG00000001511) ##22 veph1 (ENSFHEG00000001515) ENSFHEG00000001523 ENSFHEG00000001527 serpini1 (ENSFHEG00000001535) Sheepshead minnow MODERN SPECIES 280 KCNAB1 (ENSCVAG00000011968) ssr3 (ENSCVAG00000011922) TIPARP (ENSCVAG00000011906) ENSCVAG00000011900 ccnl1a (ENSCVAG00000011893) veph1 (ENSCVAG00000011880) PTX3 (ENSCVAG00000011813) ##22 ENSCVAG00000011801 ENSCVAG00000011782 serpini1 (ENSCVAG00000011762) ENSCVAG00000011751 ENSCVAG00000011727 ENSCVAG00000011640 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157023 ENSGT00940000157637.a.i ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Poecilia ANCESTRAL SPECIES 2 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a.i ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o NAME_6 ANCESTRAL SPECIES 384 ENSGT00940000155368.p.b ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 Sailfin molly MODERN SPECIES 1431 ENSPLAG00000012559 ccnl1a (ENSPLAG00000012545) veph1 (ENSPLAG00000012501) PTX3 (ENSPLAG00000000273) ##22 ENSPLAG00000012389 ENSPLAG00000012342 serpini1 (ENSPLAG00000012328) Amazon molly MODERN SPECIES 651 TIPARP (ENSPFOG00000008850) ENSPFOG00000023498 ccnl1a (ENSPFOG00000008915) veph1 (ENSPFOG00000009074) PTX3 (ENSPFOG00000009376) ##22 ENSPFOG00000009424 ENSPFOG00000024442 serpini1 (ENSPFOG00000009615) ENSPFOG00000023366 ENSPFOG00000022771 Guppy MODERN SPECIES 443 bace2 (ENSPREG00000016445) ATM (ENSPREG00000016478) ENSPREG00000016529 vmp1 (ENSPREG00000016550) tubd1 (ENSPREG00000016574) rps6kb1b (ENSPREG00000016611) slc33a1 (ENSPREG00000016678) gmps (ENSPREG00000016715) ENSPREG00000016759 KCNAB1 (ENSPREG00000016824) ssr3 (ENSPREG00000016878) TIPARP (ENSPREG00000016895) ENSPREG00000016911 ccnl1a (ENSPREG00000016928) veph1 (ENSPREG00000016977) PTX3 (ENSPREG00000017014) ##22 ENSPREG00000017027 ENSPREG00000017052 serpini1 (ENSPREG00000017073) ENSPREG00000017109 ENSPREG00000017185 ENSPREG00000017202 SLITRK3 (ENSPREG00000017257) ENSPREG00000017265 scn2b (ENSPREG00000017282) SCN4B (ENSPREG00000017299) MECOM (ENSPREG00000017329) megf6 (ENSPREG00000017431) ENSPREG00000017601 ENSPREG00000017608 mffa (ENSPREG00000017621) Platyfish MODERN SPECIES 9 bace2 (ENSXMAG00000016905) ATM (ENSXMAG00000016925) ENSXMAG00000022466 vmp1 (ENSXMAG00000029668) tubd1 (ENSXMAG00000016973) rps6kb1b (ENSXMAG00000024330) slc33a1 (ENSXMAG00000017004) gmps (ENSXMAG00000017018) ENSXMAG00000017051 KCNAB1 (ENSXMAG00000021396) ssr3 (ENSXMAG00000017141) TIPARP (ENSXMAG00000022705) ENSXMAG00000024244 ccnl1a (ENSXMAG00000025483) veph1 (ENSXMAG00000017171) PTX3 (ENSXMAG00000017185) ##22 ENSXMAG00000017189 ENSXMAG00000017194 serpini1 (ENSXMAG00000017196) ENSXMAG00000017223 ENSXMAG00000029864 ENSXMAG00000017226 ENSXMAG00000027355 ENSXMAG00000025539 ENSXMAG00000023127 SLITRK3 (ENSXMAG00000019627) BCHE (ENSXMAG00000023563) ENSXMAG00000021272 ENSXMAG00000017287 scn2b (ENSXMAG00000023404) SCN4B (ENSXMAG00000010741) Oryzias ANCESTRAL SPECIES 8 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o Oryzias_b ANCESTRAL SPECIES 14 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000156971.A ENSGT00940000159256.o ENSGT00390000009776.o Indian medaka MODERN SPECIES 12 ENSOMEG00000005072 ENSOMEG00000000658 vmp1 (ENSOMEG00000005037) tubd1 (ENSOMEG00000005007) rps6kb1b (ENSOMEG00000004988) slc33a1 (ENSOMEG00000004961) ENSOMEG00000000107 gmps (ENSOMEG00000004911) ENSOMEG00000004875 KCNAB1 (ENSOMEG00000004823) ssr3 (ENSOMEG00000004731) TIPARP (ENSOMEG00000004712) ENSOMEG00000004695 ccnl1a (ENSOMEG00000004676) veph1 (ENSOMEG00000004616) PTX3 (ENSOMEG00000004580) ##22 ENSOMEG00000004575 ENSOMEG00000004565 ENSOMEG00000004503 serpini1 (ENSOMEG00000004490) ENSOMEG00000004474 ENSOMEG00000004428 ENSOMEG00000004409 SLITRK3 (ENSOMEG00000004360) ENSOMEG00000004341 scn2b (ENSOMEG00000004328) SCN4B (ENSOMEG00000004311) MECOM (ENSOMEG00000004276) megf6 (ENSOMEG00000004159) ENSOMEG00000003975 mffa (ENSOMEG00000000092) Javanese ricefish MODERN SPECIES 4 bace2 (ENSOJAG00000005226) ENSOJAG00000005284 ENSOJAG00000005295 ENSOJAG00000005355 vmp1 (ENSOJAG00000005368) tubd1 (ENSOJAG00000005491) rps6kb1b (ENSOJAG00000005562) slc33a1 (ENSOJAG00000006317) gmps (ENSOJAG00000006419) KCNAB1 (ENSOJAG00000007464) ssr3 (ENSOJAG00000007577) TIPARP (ENSOJAG00000007617) ENSOJAG00000007626 ccnl1a (ENSOJAG00000007650) veph1 (ENSOJAG00000007679) PTX3 (ENSOJAG00000007708) ##22 ENSOJAG00000007721 ENSOJAG00000007736 serpini1 (ENSOJAG00000007758) ENSOJAG00000007894 ENSOJAG00000008161 SLITRK3 (ENSOJAG00000009670) ENSOJAG00000009680 scn2b (ENSOJAG00000009707) SCN4B (ENSOJAG00000009714) MECOM (ENSOJAG00000009788) megf6 (ENSOJAG00000010744) ENSOJAG00000011326 mffa (ENSOJAG00000011338) ENSOJAG00000011362 mrpl44 (ENSOJAG00000011370) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT01030000235461 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00940000171284 ENSGT00980000198573.a.b.ab.b.a.a ENSGT00940000164162 ENSGT01000000221723 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000157208 ENSGT00940000159256.o ENSGT00940000156971.A Japanese Medaka HdrR MODERN SPECIES 4 ENSORLG00000012728 vmp1 (ENSORLG00000012702) tubd1 (ENSORLG00000012665) rps6kb1b (ENSORLG00000012636) slc33a1 (ENSORLG00000012608) gmps (ENSORLG00000012593) ENSORLG00000012554 KCNAB1 (ENSORLG00000012536) ssr3 (ENSORLG00000012523) ENSORLG00000025556 TIPARP (ENSORLG00000023309) ENSORLG00000029262 ENSORLG00000025029 ENSORLG00000027313 ccnl1a (ENSORLG00000012502) PTX3 (ENSORLG00000026149) ##22 veph1 (ENSORLG00000012452) ENSORLG00000012393 ENSORLG00000024315 serpini1 (ENSORLG00000012374) ENSORLG00000012312 ENSORLG00000023706 ENSORLG00000012288 SLITRK3 (ENSORLG00000012102) bche (ENSORLG00000020161) ENSORLG00000022219 ENSORLG00000024556 scn2b (ENSORLG00000012094) ENSORLG00000012083 MECOM (ENSORLG00000012077) ENSORLG00000012013 Chinese medaka MODERN SPECIES 2129 PTX3 (ENSOSIG00000005707) ##22 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Cichlidae ANCESTRAL SPECIES 25 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 ENSGT00940000157208 Haplochromini ANCESTRAL SPECIES 33 ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Burton s mouthbrooder MODERN SPECIES 304 ENSHBUG00000006418 ENSHBUG00000006402 ENSHBUG00000006378 vmp1 (ENSHBUG00000006342) tubd1 (ENSHBUG00000006291) rps6kb1b (ENSHBUG00000006264) slc33a1 (ENSHBUG00000006210) gmps (ENSHBUG00000000946) ENSHBUG00000006145 kcnab1a (ENSHBUG00000006103) ssr3 (ENSHBUG00000006051) TIPARP (ENSHBUG00000001162) ENSHBUG00000006024 ccnl1a (ENSHBUG00000006011) veph1 (ENSHBUG00000005977) PTX3 (ENSHBUG00000005964) ##22 ENSHBUG00000005954 ENSHBUG00000005939 ENSHBUG00000005934 serpini1 (ENSHBUG00000005921) pdcd10a (ENSHBUG00000005860) WDR49 (ENSHBUG00000005604) ENSHBUG00000005560 eed (ENSHBUG00000005542) pwp2h (ENSHBUG00000005530) ENSHBUG00000005457 ENSHBUG00000005434 ENSHBUG00000005415 ENSHBUG00000005353 INPP4A (ENSHBUG00000005299) FAM171B (ENSHBUG00000005092) Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368.bb ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368.bb ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000163043.h ENSGT00940000164162.t ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Zebra mbuna MODERN SPECIES 1096 bace2 (ENSMZEG00005012442) ENSMZEG00005012426 ENSMZEG00005012408 ENSMZEG00005012387 vmp1 (ENSMZEG00005012351) tubd1 (ENSMZEG00005012335) rps6kb1b (ENSMZEG00005012294) slc33a1 (ENSMZEG00005012250) gmps (ENSMZEG00005012210) ENSMZEG00005012186 kcnab1a (ENSMZEG00005011156) ssr3 (ENSMZEG00005011142) TIPARP (ENSMZEG00005011128) ENSMZEG00005011115 ccnl1a (ENSMZEG00005011094) PTX3 (ENSMZEG00005011083) ##22 veph1 (ENSMZEG00005011041) ENSMZEG00005011024 ENSMZEG00005011004 ENSMZEG00005010991 serpini1 (ENSMZEG00005010980) pdcd10a (ENSMZEG00005010953) WDR49 (ENSMZEG00005010928) ENSMZEG00005010907 ENSMZEG00005010896 baxa (ENSMZEG00005010658) ENSMZEG00005010621 ENSMZEG00005010588 SLITRK3 (ENSMZEG00005010585) ENSMZEG00005010573 ENSMZEG00005010564 Eastern happy MODERN SPECIES 5 ENSACLG00000002815 vmp1 (ENSACLG00000002866) tubd1 (ENSACLG00000002918) rps6kb1b (ENSACLG00000002988) slc33a1 (ENSACLG00000003045) gmps (ENSACLG00000003086) ENSACLG00000003138 KCNAB1 (ENSACLG00000003199) ENSACLG00000003251 ssr3 (ENSACLG00000003278) TIPARP (ENSACLG00000003294) ENSACLG00000003336 ccnl1a (ENSACLG00000003702) veph1 (ENSACLG00000003779) ENSACLG00000003799 PTX3 (ENSACLG00000003802) ##22 ENSACLG00000003814 ENSACLG00000003825 ENSACLG00000003853 serpini1 (ENSACLG00000003868) pdcd10a (ENSACLG00000003887) WDR49 (ENSACLG00000003905) ENSACLG00000004220 ENSACLG00000004331 baxa (ENSACLG00000004345) ENSACLG00000004442 ENSACLG00000004483 SLITRK3 (ENSACLG00000004629) ENSACLG00000004640 ENSACLG00000004654 ENSACLG00000004686 P. nyererei MODERN SPECIES 298 ATM (ENSPNYG00000011075) ENSPNYG00000011035 ENSPNYG00000011010 vmp1 (ENSPNYG00000010976) tubd1 (ENSPNYG00000010942) ENSPNYG00000010930 rps6kb1b (ENSPNYG00000010910) slc33a1 (ENSPNYG00000010862) gmps (ENSPNYG00000010788) ENSPNYG00000010752 kcnab1a (ENSPNYG00000010724) ssr3 (ENSPNYG00000010708) TIPARP (ENSPNYG00000010697) ENSPNYG00000010684 ccnl1a (ENSPNYG00000010611) PTX3 (ENSPNYG00000010607) ##22 veph1 (ENSPNYG00000010566) ENSPNYG00000010528 ENSPNYG00000010502 ENSPNYG00000010480 serpini1 (ENSPNYG00000010454) pdcd10a (ENSPNYG00000010422) WDR49 (ENSPNYG00000010373) ENSPNYG00000010360 ENSPNYG00000010299 ENSPNYG00000010260 SLITRK3 (ENSPNYG00000010251) ENSPNYG00000010237 Lyretail cichlid MODERN SPECIES 357 ENSNBRG00000001548 ENSNBRG00000001564 ENSNBRG00000001584 vmp1 (ENSNBRG00000001690) tubd1 (ENSNBRG00000001764) rps6kb1b (ENSNBRG00000001797) slc33a1 (ENSNBRG00000001875) gmps (ENSNBRG00000001913) ENSNBRG00000001977 kcnab1a (ENSNBRG00000002042) ssr3 (ENSNBRG00000002077) tiparp (ENSNBRG00000002101) ENSNBRG00000002119 ccnl1a (ENSNBRG00000002147) veph1 (ENSNBRG00000002195) PTX3 (ENSNBRG00000002253) ##22 ENSNBRG00000002274 ENSNBRG00000002301 ENSNBRG00000002317 ENSNBRG00000002351 serpini1 (ENSNBRG00000002372) pdcd10a (ENSNBRG00000002411) WDR49 (ENSNBRG00000002439) ENSNBRG00000002509 ENSNBRG00000002606 SLITRK3 (ENSNBRG00000002644) ENSNBRG00000002653 ENSNBRG00000002700 scn2b (ENSNBRG00000002731) SCN4B (ENSNBRG00000002738) ENSNBRG00000002749 Nile tilapia MODERN SPECIES 5 bace2 (ENSONIG00000005485) ATM (ENSONIG00000005496) ENSONIG00000005503 vmp1 (ENSONIG00000005506) tubd1 (ENSONIG00000005513) rps6kb1b (ENSONIG00000005515) slc33a1 (ENSONIG00000005517) gmps (ENSONIG00000005518) ENSONIG00000005521 KCNAB1 (ENSONIG00000005523) ssr3 (ENSONIG00000005536) tiparp (ENSONIG00000036070) ENSONIG00000026707 ccnl1a (ENSONIG00000005540) ENSONIG00000041653 PTX3 (ENSONIG00000037163) ##22 veph1 (ENSONIG00000005544) pqlc2l (ENSONIG00000005546) ENSONIG00000005548 ENSONIG00000032201 serpini1 (ENSONIG00000005552) pdcd10a (ENSONIG00000005553) WDR49 (ENSONIG00000005556) ENSONIG00000024160 ENSONIG00000032359 ENSONIG00000030516 ENSONIG00000034892 ENSONIG00000014952 ENSONIG00000030611 ENSONIG00000005580 scn2b (ENSONIG00000005584) Midas cichlid MODERN SPECIES 1082 ENSACIG00000012260 ENSACIG00000012273 vmp1 (ENSACIG00000012291) tubd1 (ENSACIG00000012321) ENSACIG00000012364 rps6kb1b (ENSACIG00000012381) slc33a1 (ENSACIG00000012418) gmps (ENSACIG00000012452) ENSACIG00000012494 KCNAB1 (ENSACIG00000012518) ssr3 (ENSACIG00000012559) tiparp (ENSACIG00000012575) ENSACIG00000012602 ccnl1a (ENSACIG00000012628) veph1 (ENSACIG00000012800) PTX3 (ENSACIG00000012845) ##22 ENSACIG00000012874 golim4a (ENSACIG00000012889) ENSACIG00000012902 ENSACIG00000012939 serpini1 (ENSACIG00000012958) pdcd10a (ENSACIG00000012979) ENSACIG00000013004 ENSACIG00000013028 ENSACIG00000013052 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT00390000018660.l ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b ENSGT00940000174694 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b Amphiprion ANCESTRAL SPECIES 6 ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00390000000970 ENSGT00940000155368 ENSGT00990000203825 ENSGT00940000159135 ENSGT01100000263515.a.b.a.a ##22 ENSGT00390000018660.l ENSGT00940000178902 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913.`b.a ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT01030000234556.b.a ENSGT01030000234556.b.b.b Clown anemonefish MODERN SPECIES 3242 PTX3 (ENSAOCG00000010570) ##22 ENSAOCG00000002193 ENSAOCG00000010551 ENSAOCG00000010536 ENSAOCG00000010521 ENSAOCG00000010496 serpini1 (ENSAOCG00000010478) pdcd10a (ENSAOCG00000010455) WDR49 (ENSAOCG00000010413) ENSAOCG00000002119 ENSAOCG00000010334 Orange clownfish MODERN SPECIES 23 bace2 (ENSAPEG00000020666) ENSAPEG00000020652 ATM (ENSAPEG00000020503) ENSAPEG00000020478 vmp1 (ENSAPEG00000020424) tubd1 (ENSAPEG00000020380) rps6kb1b (ENSAPEG00000020308) slc33a1 (ENSAPEG00000020265) gmps (ENSAPEG00000020189) ENSAPEG00000020169 kcnab1a (ENSAPEG00000020132) ssr3 (ENSAPEG00000020109) TIPARP (ENSAPEG00000020094) ENSAPEG00000020089 ccnl1a (ENSAPEG00000020021) PTX3 (ENSAPEG00000020003) ##22 veph1 (ENSAPEG00000019966) ENSAPEG00000019942 ENSAPEG00000019910 ENSAPEG00000019874 serpini1 (ENSAPEG00000019861) pdcd10a (ENSAPEG00000019821) WDR49 (ENSAPEG00000019760) ENSAPEG00000019713 ENSAPEG00000019603 ENSAPEG00000019562 SLITRK3 (ENSAPEG00000019548) ENSAPEG00000019519 scn2b (ENSAPEG00000019491) SCN4B (ENSAPEG00000019472) MECOM (ENSAPEG00000019413) Spiny chromis MODERN SPECIES 705 KCNAB1 (ENSAPOG00000020080) ssr3 (ENSAPOG00000020040) TIPARP (ENSAPOG00000020007) ENSAPOG00000019998 ccnl1a (ENSAPOG00000019967) veph1 (ENSAPOG00000019891) PTX3 (ENSAPOG00000019768) ##22 Bicolor damselfish MODERN SPECIES 642 veph1 (ENSSPAG00000002089) PTX3 (ENSSPAG00000002173) ##22 ENSSPAG00000002185 ENSSPAG00000002212 ENSSPAG00000002224 ENSSPAG00000002237 serpini1 (ENSSPAG00000002272) pdcd10a (ENSSPAG00000002302) WDR49 (ENSSPAG00000002337) ENSSPAG00000002412 Osteoglossiformes ANCESTRAL SPECIES 14 ENSGT00940000166814 ENSGT00940000162782 ENSGT00940000165453 ENSGT00940000157185 ENSGT00390000004493 ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 ENSGT00940000155368 ENSGT00940000162647 ENSGT00940000159135 ENSGT00940000169328.a.a ENSGT00390000018660 ENSGT01100000263515.a.b.a.a ##22 ENSGT00940000163939 ENSGT00940000164637 ENSGT00390000015980 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000157637.a ENSGT00390000005140.a.s ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT01030000234621.C.a.a.b Asian bonytongue MODERN SPECIES 1 olfcu1 (ENSSFOG00015001006) olfcq3 (ENSSFOG00015001074) ENSSFOG00015001221 PLCH1 (ENSSFOG00015001415) c18h3orf33 (ENSSFOG00015001468) slc33a1 (ENSSFOG00015001473) gmps (ENSSFOG00015001520) ENSSFOG00015001602 KCNAB1 (ENSSFOG00015001635) ssr3 (ENSSFOG00015033336) TIPARP (ENSSFOG00015029700) ENSSFOG00015001719 ccnl1a (ENSSFOG00015001732) ENSSFOG00015028603 veph1 (ENSSFOG00015028924) PTX3 (ENSSFOG00015028578) ##22 ENSSFOG00015001829 ENSSFOG00015001879 ENSSFOG00015032645 serpini1 (ENSSFOG00015001922) pdcd10b (ENSSFOG00015032682) WDR49 (ENSSFOG00015001998) ENSSFOG00015002069 ENSSFOG00015002099 ENSSFOG00015002120 ENSSFOG00015002162 fam168a (ENSSFOG00015031466) P2RY6 (ENSSFOG00015033260) ARHGEF17 (ENSSFOG00015027586) relt (ENSSFOG00015031194) FCHSD2 (ENSSFOG00015002267) Spotted gar MODERN SPECIES 652 ENSLOCG00000003084 ENSLOCG00000003112 PLCH1 (ENSLOCG00000003130) c18h3orf33 (ENSLOCG00000003149) slc33a1 (ENSLOCG00000003159) gmps (ENSLOCG00000003174) ENSLOCG00000003204 ENSLOCG00000003230 kcnab1a (ENSLOCG00000003246) ssr3 (ENSLOCG00000003280) tiparp (ENSLOCG00000003293) LEKR1 (ENSLOCG00000003307) ccnl1a (ENSLOCG00000003314) ENSLOCG00000003330 veph1 (ENSLOCG00000003346) PTX3 (ENSLOCG00000003357) ##22 ENSLOCG00000003367 ENSLOCG00000003382 serpini1 (ENSLOCG00000003396) pdcd10b (ENSLOCG00000003413) WDR49 (ENSLOCG00000003432) ENSLOCG00000003462 ENSLOCG00000003493 SLITRK3 (ENSLOCG00000017384) ENSLOCG00000003535 otol1b (ENSLOCG00000003547) sptssb (ENSLOCG00000017385) nmd3 (ENSLOCG00000003561) ppm1la (ENSLOCG00000003576) B3GALNT1 (ENSLOCG00000003594) kpna4 (ENSLOCG00000003608) Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 2632 ENSCMIG00000003141 ##22 ENSCMIG00000003110 ##22 Elephant shark MODERN SPECIES 2632 ENSCMIG00000003110 ##22 ENSCMIG00000003141 ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Coelacanth MODERN SPECIES 2708 ENSLACG00000001286 ENSLACG00000004761 ENSLACG00000006030 crp2 (ENSLACG00000022115) ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Amniota ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Sauria ANCESTRAL SPECIES 4 ENSGT00940000155118 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.a.b ENSGT00530000066362 ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 Archelosauria ANCESTRAL SPECIES 3 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT01030000234601.c.a.b ENSGT00940000171081 ENSGT00390000013440.e ENSGT01100000263954 ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 Cryptodira ANCESTRAL SPECIES 10 ENSGT01100000263567.a.a ENSGT01100000263474.a.b.b.j.b.a ENSGT01100000263474.a.b.b.j.a.b.b ENSGT01100000263504.a.b.b.b.b ENSGT01100000263474.a.b.a.c.a ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 4 ENSGT01100000263474.a.b.b.j.a.b.a.a ENSGT01100000263559.B ENSGT01100000263506.a ENSGT00940000153118.db.a.a.b.a.a.a.b.a.a ENSGT01100000263474.a.b.b.j.b.b.b.a.b ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.k ENSGT00940000153092.a.a ENSGT01100000263559.A.f ENSGT01060000248528.b.jh.a.b ENSGT01060000248528.b.jh.b ENSGT01060000248528.b.kh ENSGT01100000263474.a.b.a.d ENSGT00940000156302.fc ENSGT00940000155501.b.i.a.a ENSGT01100000263515.a.b.a.b.a.c ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159.d ENSGT00940000155858 ENSGT00390000012258 Emydidae ANCESTRAL SPECIES 82 ENSGT00940000153118.db.a.a.b.a.a.a.b.a.b.a ENSGT00940000155501.b.j ENSGT00940000155501.b.i.a.a ENSGT01100000263515.a.b.a.b.a.c ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159.d ENSGT00940000155858 ENSGT00390000012258 painted turtle MODERN SPECIES 888 ENSCPBG00000021023 ENSCPBG00000021017 ENSCPBG00000021015 ENSCPBG00000021013 ENSCPBG00000021011 ENSCPBG00000021010 ENSCPBG00000021009 ENSCPBG00000021004 ENSCPBG00000021002 ENSCPBG00000021000 ENSCPBG00000020997 ENSCPBG00000020993 ENSCPBG00000020988 ENSCPBG00000020976 ENSCPBG00000020974 ENSCPBG00000020972 ##22 APOLD1 (ENSCPBG00000020970) ENSCPBG00000020967 ENSCPBG00000020965 HEBP1 (ENSCPBG00000020964) ENSCPBG00000020961 FAM234B (ENSCPBG00000020960) GSG1 (ENSCPBG00000020959) EMP1 (ENSCPBG00000020957) GRIN2B (ENSCPBG00000020951) ATF7IP (ENSCPBG00000020944) PLBD1 (ENSCPBG00000020939) ENSCPBG00000020936 ENSCPBG00000020934 Testudinidae ANCESTRAL SPECIES 14 ENSGT01100000263515.a.b.a.b.a.c ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C.g.a ENSGT00940000155955.C.g.b ENSGT00390000000159.c ENSGT00940000155858 ENSGT00390000012258 Abingdon island giant tortoise MODERN SPECIES 1998 ENSCABG00000015213 ENSCABG00000015208 ENSCABG00000015207 H2AC1 (ENSCABG00000015189) ENSCABG00000015176 ENSCABG00000015164 ENSCABG00000015162 ENSCABG00000015152 ENSCABG00000015148 ENSCABG00000015143 ENSCABG00000015137 ENSCABG00000015133 ENSCABG00000015128 ENSCABG00000015127 ENSCABG00000015126 ##22 ENSCABG00000015125 ##22 APOLD1 (ENSCABG00000015123) DDX47 (ENSCABG00000015120) ENSCABG00000015118 HEBP1 (ENSCABG00000015116) FAM234B (ENSCABG00000015110) GSG1 (ENSCABG00000015107) EMP1 (ENSCABG00000015105) ENSCABG00000015103 GRIN2B (ENSCABG00000015099) ENSCABG00000015092 VSTM2A (ENSCABG00000015090) Testudinoidea ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.d ##22 Testudinidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.d ##22 Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005001968 ENSGEVG00005001960 ENSGEVG00005001956 ENSGEVG00005001948 ENSGEVG00005001940 ENSGEVG00005001933 ENSGEVG00005001926 ENSGEVG00005001919 ENSGEVG00005001913 ENSGEVG00005001906 ENSGEVG00005001895 ENSGEVG00005001884 ENSGEVG00005001879 ENSGEVG00005001868 ENSGEVG00005001859 ENSGEVG00005001833 ##22 APOLD1 (ENSGEVG00005001830) DDX47 (ENSGEVG00005001816) ENSGEVG00005001808 HEBP1 (ENSGEVG00005001799) FAM234B (ENSGEVG00005001776) GSG1 (ENSGEVG00005001744) EMP1 (ENSGEVG00005001724) ATOX1 (ENSGEVG00005001712) GRIN2B (ENSGEVG00005001687) ATF7IP (ENSGEVG00005001591) ENSGEVG00005001528 PLBD1 (ENSGEVG00005001463) ENSGEVG00005001391 ENSGEVG00005001300 TTC26 (ENSGEVG00005001205) Abingdon island giant tortoise MODERN SPECIES 1998 ENSCABG00000015217 ENSCABG00000015213 ENSCABG00000015208 ENSCABG00000015207 H2AC1 (ENSCABG00000015189) ENSCABG00000015176 ENSCABG00000015164 ENSCABG00000015162 ENSCABG00000015152 ENSCABG00000015148 ENSCABG00000015143 ENSCABG00000015137 ENSCABG00000015133 ENSCABG00000015128 ENSCABG00000015127 ENSCABG00000015126 ##22 ENSCABG00000015125 ##22 APOLD1 (ENSCABG00000015123) DDX47 (ENSCABG00000015120) ENSCABG00000015118 HEBP1 (ENSCABG00000015116) FAM234B (ENSCABG00000015110) GSG1 (ENSCABG00000015107) EMP1 (ENSCABG00000015105) ENSCABG00000015103 GRIN2B (ENSCABG00000015099) ENSCABG00000015092 VSTM2A (ENSCABG00000015090) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.a.b ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00950000182961.a.b.b.h ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000016813 ENSGT00940000155118 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.a.b ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00950000182961.a.b.b.h ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 Laterata ANCESTRAL SPECIES 6 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT00940000171081 ENSGT00390000013440 ENSGT01100000263954 ENSGT01100000263559.A.f ENSGT00940000153092.a.a ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.a ENSGT01100000263474.a.b.b.j.b.b.b.a.b.b.a ENSGT00940000156302.jc ENSGT01100000263559.B ENSGT00940000153125.F ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00950000182961.a.b.b.h ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 Common wall lizard MODERN SPECIES 1 WDR91 (ENSPMRG00000011912) TMEM140 (ENSPMRG00000011972) AGBL3 (ENSPMRG00000011977) PDE6H (ENSPMRG00000011991) ARHGDIB (ENSPMRG00000011997) ENSPMRG00000012002 ENSPMRG00000012008 MGP (ENSPMRG00000012012) ENSPMRG00000012015 ENSPMRG00000012019 SMCO3 (ENSPMRG00000012022) ENSPMRG00000012026 ENSPMRG00000012030 ENSPMRG00000012040 ENSPMRG00000012042 ENSPMRG00000012044 ##22 ENSPMRG00000012046 ENSPMRG00000012052 APOLD1 (ENSPMRG00000012062) DDX47 (ENSPMRG00000012066) ENSPMRG00000012071 ENSPMRG00000019714 ENSPMRG00000019720 ENSPMRG00000019726 ENSPMRG00000019731 FAM234B (ENSPMRG00000019736) GSG1 (ENSPMRG00000019745) ENSPMRG00000019749 EMP1 (ENSPMRG00000019757) ENSPMRG00000019785 ENSPMRG00000019788 Argentine black and white tegu MODERN SPECIES 6 POLR3H (ENSSMRG00000014008) CNOT4 (ENSSMRG00000014010) ENSSMRG00000014012 STRA8 (ENSSMRG00000014027) WDR91 (ENSSMRG00000014028) ENSSMRG00000014073 TMEM140 (ENSSMRG00000014074) AGBL3 (ENSSMRG00000014075) PDE6H (ENSSMRG00000014076) ARHGDIB (ENSSMRG00000014087) ERP27 (ENSSMRG00000014089) MGP (ENSSMRG00000014092) ENSSMRG00000014093 ENSSMRG00000014094 ENSSMRG00000014097 ENSSMRG00000014098 ##22 ENSSMRG00000014099 APOLD1 (ENSSMRG00000014100) DDX47 (ENSSMRG00000014101) ENSSMRG00000014102 ENSSMRG00000014103 HEBP1 (ENSSMRG00000014104) ENSSMRG00000014105 FAM234B (ENSSMRG00000014106) GSG1 (ENSSMRG00000014107) EMP1 (ENSSMRG00000014108) ENSSMRG00000014109 GRIN2B (ENSSMRG00000014110) ATF7IP (ENSSMRG00000014112) PLBD1 (ENSSMRG00000014113) GUCY2C (ENSSMRG00000014114) Toxicofera ANCESTRAL SPECIES 7 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT00940000171081 ENSGT01100000263954 ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00950000182961.a.b.b.h ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 Lizard MODERN SPECIES 4 STRA8 (ENSACAG00000011014) WDR91 (ENSACAG00000010904) ENSACAG00000035315 TMEM140 (ENSACAG00000010897) AGBL3 (ENSACAG00000010849) PDE6H (ENSACAG00000020931) ENSACAG00000042347 ARHGDIB (ENSACAG00000010811) ERP27 (ENSACAG00000010795) MGP (ENSACAG00000010792) ENSACAG00000044172 SMCO3 (ENSACAG00000010786) ENSACAG00000010717 ENSACAG00000042085 ENSACAG00000010716 ENSACAG00000028268 ##22 ENSACAG00000045095 ENSACAG00000029320 ENSACAG00000010710 DDX47 (ENSACAG00000010648) ENSACAG00000010644 ENSACAG00000022275 HEBP1 (ENSACAG00000041228) ENSACAG00000003634 ENSACAG00000035345 ENSACAG00000003666 ENSACAG00000036310 ENSACAG00000041836 ENSACAG00000043515 NDUFA6 (ENSACAG00000003916) SMDT1 (ENSACAG00000003926) Elapidae ANCESTRAL SPECIES 6 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.a.b ENSGT00530000066362 ENSGT00940000171081 ENSGT01100000263954 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263514.A.f.p.e.a ENSGT01100000263515.a.b.a.b.a ##22 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 ENSGT00950000183213.a.a.a Indian cobra MODERN SPECIES 6 ENSNNAG00000014769 CNOT4 (ENSNNAG00000014785) ENSNNAG00000014867 STRA8 (ENSNNAG00000014961) WDR91 (ENSNNAG00000015012) TMEM140 (ENSNNAG00000015058) AGBL3 (ENSNNAG00000015082) PDE6H (ENSNNAG00000015105) ARHGDIB (ENSNNAG00000015117) ERP27 (ENSNNAG00000015128) MGP (ENSNNAG00000015146) ENSNNAG00000015157 ENSNNAG00000015166 ENSNNAG00000015197 ENSNNAG00000015240 ENSNNAG00000015250 ##22 APOLD1 (ENSNNAG00000015258) DDX47 (ENSNNAG00000015274) ENSNNAG00000015331 ENSNNAG00000015335 HEBP1 (ENSNNAG00000015344) ENSNNAG00000015356 FAM234B (ENSNNAG00000015364) EMP1 (ENSNNAG00000015409) GRIN2B (ENSNNAG00000015426) ATF7IP (ENSNNAG00000015468) PLBD1 (ENSNNAG00000015696) ENSNNAG00000015789 TTC26 (ENSNNAG00000015801) UBN2 (ENSNNAG00000015822) FMC1 (ENSNNAG00000015857) Anura ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Frog DUPLICATION Frog MODERN SPECIES 4 dusp7 (ENSXETG00000039476) rpl29 (ENSXETG00000010811) fbln2 (ENSXETG00000010810) itih4 (ENSXETG00000036712) ENSXETG00000044737 ENSXETG00000032675 ENSXETG00000037753 pde6h (ENSXETG00000043410) arhgdib (ENSXETG00000002772) erp27 (ENSXETG00000032403) mgp (ENSXETG00000048657) ENSXETG00000048183 wbp11 (ENSXETG00000002770) ptx (ENSXETG00000002769) crp (ENSXETG00000025212) ##22 crp.3 (ENSXETG00000025211) ##22 josd2 (ENSXETG00000002767) twf2 (ENSXETG00000033305) wdr82 (ENSXETG00000002765) glyctk (ENSXETG00000030358) dnah1 (ENSXETG00000030029) bap1 (ENSXETG00000000091) ENSXETG00000032120 acy1.1 (ENSXETG00000000089) abhd14a (ENSXETG00000001631) abhd14b (ENSXETG00000000088) parp3 (ENSXETG00000000087) ENSXETG00000040493 rrp9 (ENSXETG00000030671) grm2 (ENSXETG00000032539) tex264 (ENSXETG00000030069) Frog MODERN SPECIES 4 grm2 (ENSXETG00000032539) rrp9 (ENSXETG00000030671) ENSXETG00000040493 parp3 (ENSXETG00000000087) abhd14b (ENSXETG00000000088) abhd14a (ENSXETG00000001631) acy1.1 (ENSXETG00000000089) ENSXETG00000032120 bap1 (ENSXETG00000000091) dnah1 (ENSXETG00000030029) glyctk (ENSXETG00000030358) wdr82 (ENSXETG00000002765) twf2 (ENSXETG00000033305) josd2 (ENSXETG00000002767) crp.3 (ENSXETG00000025211) ##22 crp (ENSXETG00000025212) ##22 ptx (ENSXETG00000002769) wbp11 (ENSXETG00000002770) ENSXETG00000048183 mgp (ENSXETG00000048657) erp27 (ENSXETG00000032403) arhgdib (ENSXETG00000002772) pde6h (ENSXETG00000043410) ENSXETG00000037753 ENSXETG00000032675 ENSXETG00000044737 itih4 (ENSXETG00000036712) fbln2 (ENSXETG00000010810) rpl29 (ENSXETG00000010811) dusp7 (ENSXETG00000039476) poc1a (ENSXETG00000010813) Actinopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a ##22 Neopterygii DUPLICATION Neopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Euacanthomorphacea ANCESTRAL SPECIES 80 ENSGT00940000161103.a ENSGT00390000008969 ENSGT01010000222313.A.b.b.a.a.a ENSGT00940000165613 ENSGT00940000158525.u ENSGT00940000154169.A.h ENSGT00940000159991.A.a ENSGT00940000163160.b.a.b ENSGT00940000163852.c.a.b.a.a ENSGT00390000015438 ENSGT00930000151045.e ENSGT00940000158312.f ENSGT00390000012605 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00940000157381.d Pinecone sodierfish MODERN SPECIES 22 fus (ENSMMDG00005011362) arl6ip1 (ENSMMDG00005011356) mvp (ENSMMDG00005009599) TLCD3B (ENSMMDG00005009556) nlk1 (ENSMMDG00005009545) ENSMMDG00005009541 cdipt (ENSMMDG00005009537) ENSMMDG00005006806 ENSMMDG00005006710 JMJD8 (ENSMMDG00005006706) STUB1 (ENSMMDG00005006703) CAPN15 (ENSMMDG00005006699) amdhd2 (ENSMMDG00005006398) nog2 (ENSMMDG00005006385) ENSMMDG00005006383 ENSMMDG00005006349 ##22 suz12a (ENSMMDG00005006250) crlf3 (ENSMMDG00005006231) ENSMMDG00005006229 nde1 (ENSMMDG00005006224) ENSMMDG00005006209 ENSMMDG00005006201 ENSMMDG00005006197 gsg1l (ENSMMDG00005006196) ENSMMDG00005006194 ENSMMDG00005006192 ENSMMDG00005006190 ENSMMDG00005006189 ENSMMDG00005006188 flr (ENSMMDG00005003195) si:ch211-76l23.7 (ENSMMDG00005003087) Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00940000157381.d Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Eupercaria ANCESTRAL SPECIES 3 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a Tetraodontidae ANCESTRAL SPECIES 8 ENSGT00940000176898 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116.c ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00940000157381.d Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000003883 mbnl1 (ENSTNIG00000003878) BACH2 (ENSTNIG00000003864) ENSTNIG00000003863 ENSTNIG00000000081 ENSTNIG00000003859 myh7l (ENSTNIG00000003860) PFKFB2 (ENSTNIG00000003857) ENSTNIG00000003856 SKI (ENSTNIG00000001491) det1 (ENSTNIG00000003849) ENSTNIG00000003841 tfap2c (ENSTNIG00000003840) ENSTNIG00000003838 AMIGO3 (ENSTNIG00000003837) ENSTNIG00000001250 ##22 ENSTNIG00000003831 fgf8b (ENSTNIG00000003830) ENSTNIG00000000859 aqp3a (ENSTNIG00000003827) nol6 (ENSTNIG00000003826) eif3s10 (ENSTNIG00000003822) eif4e2rs1 (ENSTNIG00000003820) zgc:158659 (ENSTNIG00000003819) dnaaf1 (ENSTNIG00000003818) ENSTNIG00000003817 ENSTNIG00000003815 EFNA5 (ENSTNIG00000003814) ENSTNIG00000003813 ENSTNIG00000003807 ENSTNIG00000001875 Tetraodon MODERN SPECIES 26 ENSTNIG00000000221 ENSTNIG00000005072 SLC29A1 (ENSTNIG00000005073) aasdhppt (ENSTNIG00000003903) ENSTNIG00000003904 PDGFD (ENSTNIG00000005245) ENSTNIG00000005246 ENSTNIG00000007163 DYNC2H1 (ENSTNIG00000007164) fzd4 (ENSTNIG00000007165) ENSTNIG00000014244 ENSTNIG00000014245 hsf4 (ENSTNIG00000002981) ENSTNIG00000000685 ENSTNIG00000000692 ENSTNIG00000001121 ##22 nanp (ENSTNIG00000002723) polr1b (ENSTNIG00000002722) nvl (ENSTNIG00000002721) tk2 (ENSTNIG00000002720) aprt (ENSTNIG00000003933) CDT1 (ENSTNIG00000003932) ENSTNIG00000005512 ttc27 (ENSTNIG00000005511) ENSTNIG00000005513 BIRC6 (ENSTNIG00000005514) yipf4 (ENSTNIG00000005515) exo1 (ENSTNIG00000004361) ENSTNIG00000000634 APBA1 (ENSTNIG00000003636) rflna (ENSTNIG00000003637) Tetraodon MODERN SPECIES 18 anapc2 (ENSTNIG00000011299) ENSTNIG00000011298 kat8 (ENSTNIG00000011297) xylt1 (ENSTNIG00000011296) rab40c (ENSTNIG00000011295) pigq (ENSTNIG00000011294) eef2kmt (ENSTNIG00000011293) alg1 (ENSTNIG00000011292) si:ch211-76l23.7 (ENSTNIG00000011291) flr (ENSTNIG00000011290) ENSTNIG00000011289 gsg1l (ENSTNIG00000011288) ENSTNIG00000011287 nde1 (ENSTNIG00000011286) ENSTNIG00000011285 ENSTNIG00000011284 ##22 crlf3 (ENSTNIG00000001784) suz12a (ENSTNIG00000011282) tsen54 (ENSTNIG00000011281) ENSTNIG00000000377 TMEM104 (ENSTNIG00000011280) GRIN2C (ENSTNIG00000011279) RBFOX3 (ENSTNIG00000011278) ENPP7 (ENSTNIG00000011277) cbx2 (ENSTNIG00000011276) hlfa (ENSTNIG00000011274) FOXK2 (ENSTNIG00000011273) SHISA6 (ENSTNIG00000011272) elac2 (ENSTNIG00000011271) ENSTNIG00000000904 rpl27 (ENSTNIG00000011270) Fugu MODERN SPECIES 17 ENSTRUG00000026065 ENSTRUG00000021288 ENSTRUG00000023767 ENSTRUG00000021180 hlfa (ENSTRUG00000003731) mmd (ENSTRUG00000003469) TMEM100 (ENSTRUG00000003457) pctp (ENSTRUG00000003206) nog1 (ENSTRUG00000002697) ENSTRUG00000028927 ENPP7 (ENSTRUG00000002141) RBFOX3 (ENSTRUG00000004894) GRIN2C (ENSTRUG00000004640) TMEM104 (ENSTRUG00000004484) tsen54 (ENSTRUG00000004230) ENSTRUG00000021450 ##22 suz12a (ENSTRUG00000003743) crlf3 (ENSTRUG00000003242) MPV17L (ENSTRUG00000003129) nde1 (ENSTRUG00000002751) ENSTRUG00000000581 ENSTRUG00000000579 gsg1l (ENSTRUG00000000563) ENSTRUG00000022924 flr (ENSTRUG00000000444) si:ch211-76l23.7 (ENSTRUG00000000435) alg1 (ENSTRUG00000030264) eef2kmt (ENSTRUG00000028488) pigq (ENSTRUG00000001780) rab40c (ENSTRUG00000033219) gig2k (ENSTRUG00000024239) Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 278 RBFOX3 (ENSLBEG00000004030) GRIN2C (ENSLBEG00000004081) TMEM104 (ENSLBEG00000004136) ENSLBEG00000004184 tsen54 (ENSLBEG00000004199) ENSLBEG00000004231 ##22 ENSLBEG00000004266 ##22 ENSLBEG00000004298 ##22 suz12a (ENSLBEG00000004354) crlf3 (ENSLBEG00000004440) ENSLBEG00000004481 nde1 (ENSLBEG00000004500) ENSLBEG00000004905 ENSLBEG00000006750 gsg1l (ENSLBEG00000006777) ENSLBEG00000006822 flr (ENSLBEG00000006842) si:ch211-76l23.7 (ENSLBEG00000006881) alg1 (ENSLBEG00000006906) eef2kmt (ENSLBEG00000006965) pigq (ENSLBEG00000007045) rab40c (ENSLBEG00000007129) Ballan wrasse MODERN SPECIES 278 RBFOX3 (ENSLBEG00000004030) GRIN2C (ENSLBEG00000004081) TMEM104 (ENSLBEG00000004136) ENSLBEG00000004184 tsen54 (ENSLBEG00000004199) ENSLBEG00000004231 ##22 ENSLBEG00000004266 ##22 ENSLBEG00000004298 ##22 suz12a (ENSLBEG00000004354) crlf3 (ENSLBEG00000004440) ENSLBEG00000004481 nde1 (ENSLBEG00000004500) ENSLBEG00000004905 ENSLBEG00000006750 gsg1l (ENSLBEG00000006777) ENSLBEG00000006822 flr (ENSLBEG00000006842) si:ch211-76l23.7 (ENSLBEG00000006881) alg1 (ENSLBEG00000006906) eef2kmt (ENSLBEG00000006965) pigq (ENSLBEG00000007045) rab40c (ENSLBEG00000007129) ENSLBEG00000007175 Ballan wrasse MODERN SPECIES 278 RBFOX3 (ENSLBEG00000004030) GRIN2C (ENSLBEG00000004081) TMEM104 (ENSLBEG00000004136) ENSLBEG00000004184 tsen54 (ENSLBEG00000004199) ENSLBEG00000004231 ##22 ENSLBEG00000004266 ##22 ENSLBEG00000004298 ##22 suz12a (ENSLBEG00000004354) crlf3 (ENSLBEG00000004440) ENSLBEG00000004481 nde1 (ENSLBEG00000004500) ENSLBEG00000004905 ENSLBEG00000006750 gsg1l (ENSLBEG00000006777) ENSLBEG00000006822 flr (ENSLBEG00000006842) si:ch211-76l23.7 (ENSLBEG00000006881) alg1 (ENSLBEG00000006906) eef2kmt (ENSLBEG00000006965) pigq (ENSLBEG00000007045) Eupecaria_B ANCESTRAL SPECIES ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a Perciformes ANCESTRAL SPECIES 1 ENSGT00940000176898 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a Perciformes_a DUPLICATION Perciformes_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g.e ##22 Pike perch MODERN SPECIES 35 ENSSLUG00000008065 FOXK2 (ENSSLUG00000008044) hlfa (ENSSLUG00000008030) mmd (ENSSLUG00000008008) TMEM100 (ENSSLUG00000008004) pctp (ENSSLUG00000007999) nog1 (ENSSLUG00000007997) cbx2 (ENSSLUG00000007990) ENPP7 (ENSSLUG00000007983) RBFOX3 (ENSSLUG00000007970) ENSSLUG00000007964 GRIN2C (ENSSLUG00000007902) ENSSLUG00000007889 TMEM104 (ENSSLUG00000007882) tsen54 (ENSSLUG00000007802) ENSSLUG00000007768 ##22 suz12a (ENSSLUG00000007657) crlf3 (ENSSLUG00000007624) ENSSLUG00000007617 nde1 (ENSSLUG00000007612) ENSSLUG00000007602 ENSSLUG00000007592 ENSSLUG00000007587 gsg1l (ENSSLUG00000007581) ENSSLUG00000007577 flr (ENSSLUG00000007460) si:ch211-76l23.7 (ENSSLUG00000007440) alg1 (ENSSLUG00000007435) eef2kmt (ENSSLUG00000007428) pigq (ENSSLUG00000007079) rab40c (ENSSLUG00000007029) Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000176898 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.f ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a Channel bull blenny MODERN SPECIES 22 ENSCGOG00000000459 ENSCGOG00000000469 ENSCGOG00000000481 ENSCGOG00000000494 ENSCGOG00000000506 ENSCGOG00000000508 ENSCGOG00000000512 ENSCGOG00000000514 ENSCGOG00000000518 ENSCGOG00000000519 ENSCGOG00000000522 ENSCGOG00000000524 ENSCGOG00000000532 ENSCGOG00000000538 tsen54 (ENSCGOG00000000544) ENSCGOG00000000565 ##22 suz12a (ENSCGOG00000000625) crlf3 (ENSCGOG00000000753) ENSCGOG00000000814 ENSCGOG00000000820 ENSCGOG00000000821 radil2a (ENSCGOG00000000828) grap2a (ENSCGOG00000000841) ENSCGOG00000000844 ENSCGOG00000000885 SSTR5 (ENSCGOG00000001071) eif3d (ENSCGOG00000001083) ENSCGOG00000001100 ENSCGOG00000001103 ENSCGOG00000001104 ENSCGOG00000001105 Pike perch MODERN SPECIES 22 TRIM37 (ENSSLUG00000017094) pou2f3 (ENSSLUG00000016985) slc37a2 (ENSSLUG00000015656) ENSSLUG00000015511 psmg1 (ENSSLUG00000015503) ENSSLUG00000015496 mybbp1a (ENSSLUG00000015365) tbl2 (ENSSLUG00000015309) ENSSLUG00000015293 ENSSLUG00000015284 zw10 (ENSSLUG00000015128) mks1 (ENSSLUG00000014530) ap2b1 (ENSSLUG00000014074) HEPACAM (ENSSLUG00000013843) ENSSLUG00000013814 ENSSLUG00000013800 ##22 styxl1 (ENSSLUG00000013786) tmem120aa (ENSSLUG00000013649) ENSSLUG00000013617 CBL (ENSSLUG00000013607) alkbh4 (ENSSLUG00000013601) lrwd1 (ENSSLUG00000013581) bckdk (ENSSLUG00000013381) orai2 (ENSSLUG00000013354) USP28 (ENSSLUG00000012849) ENSSLUG00000012775 HTR3A (ENSSLUG00000012772) zbtb16a (ENSSLUG00000012764) ncam1a (ENSSLUG00000011620) cadm1a (ENSSLUG00000011243) sc5d (ENSSLUG00000011203) Eupecaria_C ANCESTRAL SPECIES 34 ENSGT00940000176898 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00940000163496.a Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 15 ENSSAUG00010018960 ENSSAUG00010018961 FOXK2 (ENSSAUG00010018964) hlfa (ENSSAUG00010018972) mmd (ENSSAUG00010018977) TMEM100 (ENSSAUG00010018983) pctp (ENSSAUG00010018984) nog1 (ENSSAUG00010018985) cbx2 (ENSSAUG00010018986) ENPP7 (ENSSAUG00010018988) RBFOX3 (ENSSAUG00010018990) GRIN2C (ENSSAUG00010018992) TMEM104 (ENSSAUG00010018994) ENSSAUG00010018995 tsen54 (ENSSAUG00010018996) ENSSAUG00010018998 ##22 ENSSAUG00010018999 ##22 suz12a (ENSSAUG00010019003) crlf3 (ENSSAUG00010019082) ENSSAUG00010019083 nde1 (ENSSAUG00010019087) ENSSAUG00010019097 ENSSAUG00010019159 gsg1l (ENSSAUG00010019161) crlf3 (ENSSAUG00010019164) ENSSAUG00010019167 nde1 (ENSSAUG00010019168) ENSSAUG00010019178 ENSSAUG00010019183 ENSSAUG00010019184 ENSSAUG00010019185 Gilthead seabream MODERN SPECIES 15 ENSSAUG00010018961 FOXK2 (ENSSAUG00010018964) hlfa (ENSSAUG00010018972) mmd (ENSSAUG00010018977) TMEM100 (ENSSAUG00010018983) pctp (ENSSAUG00010018984) nog1 (ENSSAUG00010018985) cbx2 (ENSSAUG00010018986) ENPP7 (ENSSAUG00010018988) RBFOX3 (ENSSAUG00010018990) GRIN2C (ENSSAUG00010018992) TMEM104 (ENSSAUG00010018994) ENSSAUG00010018995 tsen54 (ENSSAUG00010018996) ENSSAUG00010018998 ##22 ENSSAUG00010018999 ##22 suz12a (ENSSAUG00010019003) crlf3 (ENSSAUG00010019082) ENSSAUG00010019083 nde1 (ENSSAUG00010019087) ENSSAUG00010019097 ENSSAUG00010019159 gsg1l (ENSSAUG00010019161) crlf3 (ENSSAUG00010019164) ENSSAUG00010019167 nde1 (ENSSAUG00010019168) ENSSAUG00010019178 ENSSAUG00010019183 ENSSAUG00010019184 ENSSAUG00010019185 flr (ENSSAUG00010019223) Eupercaria_incertae_sedis ANCESTRAL SPECIES 40 ENSGT00940000176898 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00940000164445 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 483 ENSLCRG00005015953 hlfa (ENSLCRG00005015954) mmd (ENSLCRG00005015955) TMEM100 (ENSLCRG00005016045) pctp (ENSLCRG00005016046) nog1 (ENSLCRG00005016048) cbx2 (ENSLCRG00005016049) ENPP7 (ENSLCRG00005016050) ENSLCRG00005016051 RBFOX3 (ENSLCRG00005016052) ENSLCRG00005016062 GRIN2C (ENSLCRG00005000627) TMEM104 (ENSLCRG00005000646) ENSLCRG00005000670 tsen54 (ENSLCRG00005000679) ENSLCRG00005000693 ##22 ENSLCRG00005000703 ##22 suz12a (ENSLCRG00005000730) crlf3 (ENSLCRG00005001186) ENSLCRG00005001249 nde1 (ENSLCRG00005001252) ENSLCRG00005001903 gsg1l (ENSLCRG00005001906) ENSLCRG00005001917 flr (ENSLCRG00005001969) si:ch211-76l23.7 (ENSLCRG00005002220) alg1 (ENSLCRG00005002231) eef2kmt (ENSLCRG00005003453) pigq (ENSLCRG00005003457) rab40c (ENSLCRG00005003472) ENSLCRG00005003473 Large yellow croaker MODERN SPECIES 483 hlfa (ENSLCRG00005015954) mmd (ENSLCRG00005015955) TMEM100 (ENSLCRG00005016045) pctp (ENSLCRG00005016046) nog1 (ENSLCRG00005016048) cbx2 (ENSLCRG00005016049) ENPP7 (ENSLCRG00005016050) ENSLCRG00005016051 RBFOX3 (ENSLCRG00005016052) ENSLCRG00005016062 GRIN2C (ENSLCRG00005000627) TMEM104 (ENSLCRG00005000646) ENSLCRG00005000670 tsen54 (ENSLCRG00005000679) ENSLCRG00005000693 ##22 ENSLCRG00005000703 ##22 suz12a (ENSLCRG00005000730) crlf3 (ENSLCRG00005001186) ENSLCRG00005001249 nde1 (ENSLCRG00005001252) ENSLCRG00005001903 gsg1l (ENSLCRG00005001906) ENSLCRG00005001917 flr (ENSLCRG00005001969) si:ch211-76l23.7 (ENSLCRG00005002220) alg1 (ENSLCRG00005002231) eef2kmt (ENSLCRG00005003453) pigq (ENSLCRG00005003457) rab40c (ENSLCRG00005003472) ENSLCRG00005003473 ENSLCRG00005003475 European seabass DUPLICATION European seabass MODERN SPECIES 21 ENSDLAG00005022088 HLF (ENSDLAG00005031517) mmd (ENSDLAG00005022116) TMEM100 (ENSDLAG00005027024) pctp (ENSDLAG00005022183) NOG (ENSDLAG00005022186) cbx2 (ENSDLAG00005035002) ENSDLAG00005022192 RBFOX3 (ENSDLAG00005022194) ENSDLAG00005022206 ENSDLAG00005027692 ENSDLAG00005028757 ENSDLAG00005027463 ENSDLAG00005003976 ENSDLAG00005023614 ENSDLAG00005022247 ##22 ENSDLAG00005022317 ENSDLAG00005031599 ENSDLAG00005034394 ENSDLAG00005027913 ENSDLAG00005022343 ENSDLAG00005022353 ENSDLAG00005031148 ENSDLAG00005017338 ENSDLAG00005012845 ENSDLAG00005003650 ENSDLAG00005026772 ENSDLAG00005026598 ENSDLAG00005031265 ENSDLAG00005032757 ENSDLAG00005032310 European seabass MODERN SPECIES 21 cdipt (ENSDLAG00005031013) ENSDLAG00005003931 ENSDLAG00005026566 ENSDLAG00005033344 ENSDLAG00005032353 ENSDLAG00005027795 ENSDLAG00005026520 ENSDLAG00005002999 ENSDLAG00005001389 ENSDLAG00005023628 ENSDLAG00005023626 ENSDLAG00005023624 ENSDLAG00005023621 ENSDLAG00005023619 ENSDLAG00005022240 ENSDLAG00005031465 ##22 ENSDLAG00005023503 ENSDLAG00005013614 ENSDLAG00005026815 ENSDLAG00005034784 ENSDLAG00005030014 ENSDLAG00005014161 ENSDLAG00005026978 ENSDLAG00005032712 ENSDLAG00005027633 ENSDLAG00005023494 ENSDLAG00005034955 ENSDLAG00005023140 ENSDLAG00005029629 gsg1l (ENSDLAG00005023079) ENSDLAG00005026819 Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Anabantaria ANCESTRAL SPECIES 6 ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b.d ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00940000155709.j ENSGT00940000162720.b.a.a.b ENSGT00940000176898 Anabantoidei ANCESTRAL SPECIES 7 ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b.d ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00940000155709.j ENSGT00940000162720.b.a.a.b ENSGT00940000176898 Climbing perch MODERN SPECIES 21 ENSATEG00000025411 rab40c (ENSATEG00000028775) ENSATEG00000019425 eef2kmt (ENSATEG00000027502) alg1 (ENSATEG00000019464) C16orf89 (ENSATEG00000026056) flr (ENSATEG00000019509) ENSATEG00000019581 gsg1l (ENSATEG00000019586) ENSATEG00000019599 ENSATEG00000019619 ENSATEG00000019716 ENSATEG00000019722 ENSATEG00000019766 ENSATEG00000019799 ENSATEG00000019854 ##22 ENSATEG00000019860 ENSATEG00000019867 ENSATEG00000019876 ENSATEG00000019909 RBFOX3 (ENSATEG00000019945) ENSATEG00000019978 cbx2 (ENSATEG00000020046) NOG (ENSATEG00000020062) pctp (ENSATEG00000020075) TMEM100 (ENSATEG00000020109) mmd (ENSATEG00000020119) HLF (ENSATEG00000020147) ENSATEG00000020163 ENSATEG00000020212 ENSATEG00000027056 Zig-zag eel MODERN SPECIES 22 rab40c (ENSMAMG00000019415) pigq (ENSMAMG00000019429) eef2kmt (ENSMAMG00000019485) alg1 (ENSMAMG00000019464) si:ch211-76l23.7 (ENSMAMG00000019488) flr (ENSMAMG00000019512) ENSMAMG00000024913 gsg1l (ENSMAMG00000019579) ENSMAMG00000019598 ENSMAMG00000019612 ENSMAMG00000025473 ENSMAMG00000019662 ENSMAMG00000019685 ENSMAMG00000019698 ENSMAMG00000019721 ENSMAMG00000019757 ##22 ENSMAMG00000019773 ENSMAMG00000026423 ENSMAMG00000019798 RBFOX3 (ENSMAMG00000019810) ENSMAMG00000019838 cbx2 (ENSMAMG00000028062) NOG (ENSMAMG00000019869) pctp (ENSMAMG00000019878) TMEM100 (ENSMAMG00000019891) mmd (ENSMAMG00000019895) HLF (ENSMAMG00000019907) ENSMAMG00000019911 ENSMAMG00000019929 ENSMAMG00000019935 ENSMAMG00000019942 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Pleuronectoidei ANCESTRAL SPECIES 64 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 Tongue sole MODERN SPECIES 5 eif4ebp1 (ENSCSEG00000005182) ENSCSEG00000005180 ENSCSEG00000005171 cldn23.1 (ENSCSEG00000005168) ENSCSEG00000005154 LRRTM4 (ENSCSEG00000005148) rxraa (ENSCSEG00000005139) wdr5 (ENSCSEG00000005130) ENSCSEG00000005127 VAV2 (ENSCSEG00000005120) ENSCSEG00000005118 mdka (ENSCSEG00000005113) CHRM4 (ENSCSEG00000005105) ENSCSEG00000005097 CLDN10 (ENSCSEG00000005094) ENSCSEG00000005090 ##22 ENSCSEG00000005088 ABCB11 (ENSCSEG00000005079) B3GALT1 (ENSCSEG00000005076) ENSCSEG00000005075 XIRP2 (ENSCSEG00000005071) ENSCSEG00000005067 CSRNP3 (ENSCSEG00000005065) scn1lab (ENSCSEG00000005020) ENSCSEG00000005005 ENSCSEG00000005001 KCNH7 (ENSCSEG00000004954) gca (ENSCSEG00000004946) gca (ENSCSEG00000004943) dpp4 (ENSCSEG00000004930) gcga (ENSCSEG00000004916) Turbot DUPLICATION Turbot MODERN SPECIES 10 ENSSMAG00000012946 elac2 (ENSSMAG00000012868) ENSSMAG00000012855 ENSSMAG00000012849 ENSSMAG00000012837 ENSSMAG00000012820 HLF (ENSSMAG00000012803) mmd (ENSSMAG00000012759) TMEM100 (ENSSMAG00000012748) PCTP (ENSSMAG00000012721) CBX2 (ENSSMAG00000022066) ENSSMAG00000012689 RBFOX3 (ENSSMAG00000012618) ENSSMAG00000012597 ENSSMAG00000012518 ENSSMAG00000012442 ##22 ENSSMAG00000012449 ENSSMAG00000023265 ##22 FAM117A (ENSSMAG00000012429) slc35b1 (ENSSMAG00000012406) ndufa4a (ENSSMAG00000018128) spop (ENSSMAG00000012241) ENSSMAG00000025110 NXPH3 (ENSSMAG00000012235) NGFR (ENSSMAG00000012202) ENSSMAG00000012187 selenow2b (ENSSMAG00000012167) slc4a1a (ENSSMAG00000012131) ubtf (ENSSMAG00000012016) ENSSMAG00000011961 tmub2 (ENSSMAG00000012009) Turbot MODERN SPECIES 10 ENSSMAG00000012855 ENSSMAG00000012849 ENSSMAG00000012837 ENSSMAG00000012820 HLF (ENSSMAG00000012803) mmd (ENSSMAG00000012759) TMEM100 (ENSSMAG00000012748) PCTP (ENSSMAG00000012721) CBX2 (ENSSMAG00000022066) ENSSMAG00000012689 RBFOX3 (ENSSMAG00000012618) ENSSMAG00000012597 ENSSMAG00000012518 ENSSMAG00000012442 ##22 ENSSMAG00000012449 ENSSMAG00000023265 ##22 FAM117A (ENSSMAG00000012429) slc35b1 (ENSSMAG00000012406) ndufa4a (ENSSMAG00000018128) spop (ENSSMAG00000012241) ENSSMAG00000025110 NXPH3 (ENSSMAG00000012235) NGFR (ENSSMAG00000012202) ENSSMAG00000012187 selenow2b (ENSSMAG00000012167) slc4a1a (ENSSMAG00000012131) ubtf (ENSSMAG00000012016) ENSSMAG00000011961 tmub2 (ENSSMAG00000012009) asb16 (ENSSMAG00000011943) ENSSMAG00000011904 Carangaria_A ANCESTRAL SPECIES 49 ENSGT00940000162720.b.a.a.b ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b.d ENSGT00730000111088.b.c.a ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a Seriola DUPLICATION Seriola ANCESTRAL SPECIES 15 ENSGT00940000159005.c.a.a.e.b.b ENSGT00940000159005.d ENSGT00940000159005.c.a.a.e.a ENSGT01050000244887.A.a.a.b ENSGT00390000005100 ENSGT00510000047802 ENSGT01030000234518.C.a.a ENSGT00530000064158 ENSGT00940000157100.b ENSGT00940000155556.c ENSGT01090000260293 ENSGT00940000164958.b ENSGT00940000165096.b.a ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.o ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT01030000234599.a.a.u.b.w ENSGT01050000244893.c.a.b.i ENSGT01070000253855 ENSGT00390000017606.a.a ENSGT00940000166739 ENSGT01030000235729 ENSGT00470000042293.a.b.a.a ENSGT00390000007311 ENSGT00390000010721.b ENSGT00530000063686.b ENSGT00390000009532.A.d.b ENSGT00940000161346 ENSGT00940000164717.b Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 17 ENSSDUG00000021184 ENSSDUG00000021194 ENSSDUG00000021215 ENSSDUG00000021224 s1pr2 (ENSSDUG00000021236) dnmt1 (ENSSDUG00000021243) eif3g (ENSSDUG00000021286) p2ry11 (ENSSDUG00000021298) ppan (ENSSDUG00000021301) dhrs7ca (ENSSDUG00000021343) ENSSDUG00000021434 ENSSDUG00000021451 ENSSDUG00000021456 ENSSDUG00000021493 tsen54 (ENSSDUG00000021506) ENSSDUG00000021529 ##22 suz12a (ENSSDUG00000021542) crlf3 (ENSSDUG00000021575) ENSSDUG00000021588 CACNG2 (ENSSDUG00000021598) rpl3 (ENSSDUG00000021612) ENSSDUG00000021638 slc25a39 (ENSSDUG00000021646) ENSSDUG00000021658 ENSSDUG00000021673 ENSSDUG00000021681 RUNDC1 (ENSSDUG00000021685) rpl27 (ENSSDUG00000021698) ifi35 (ENSSDUG00000021704) bcat2 (ENSSDUG00000021720) hsd17b14 (ENSSDUG00000021735) Greater amberjack MODERN SPECIES 5 GRIK2 (ENSSDUG00000010981) ASCC3 (ENSSDUG00000010897) ENSSDUG00000010884 ENSSDUG00000010851 cyb5r4 (ENSSDUG00000010829) cep162 (ENSSDUG00000010796) si:ch211-198c19.1 (ENSSDUG00000010787) ADGRB1 (ENSSDUG00000010727) ENSSDUG00000010705 ENSSDUG00000010677 ##22 ENSSDUG00000010658 NOD1 (ENSSDUG00000010639) enpp2 (ENSSDUG00000010456) taf2 (ENSSDUG00000010339) cndp1 (ENSSDUG00000010219) ENSSDUG00000010207 ABHD5 (ENSSDUG00000010168) ano10a (ENSSDUG00000010100) snrka (ENSSDUG00000010054) pomgnt2 (ENSSDUG00000010027) GASK1A (ENSSDUG00000010008) tgfbr2b (ENSSDUG00000009962) ENSSDUG00000009929 ENSSDUG00000009838 ENSSDUG00000009749 Yellowtail amberjack MODERN SPECIES 2918 ENSSLDG00000014656 ENSSLDG00000014669 ENSSLDG00000014682 s1pr2 (ENSSLDG00000014695) dnmt1 (ENSSLDG00000014902) eif3g (ENSSLDG00000016076) p2ry11 (ENSSLDG00000016092) ppan (ENSSLDG00000016106) dhrs7ca (ENSSLDG00000016136) ENSSLDG00000016151 ENSSLDG00000016175 ENSSLDG00000016196 ENSSLDG00000016242 ENSSLDG00000016272 tsen54 (ENSSLDG00000016303) ENSSLDG00000016323 ##22 suz12a (ENSSLDG00000016341) crlf3 (ENSSLDG00000016370) ENSSLDG00000016406 CACNG2 (ENSSLDG00000016443) ENSSLDG00000016458 rpl3 (ENSSLDG00000016479) ENSSLDG00000016511 slc25a39 (ENSSLDG00000016541) ENSSLDG00000016597 ENSSLDG00000016624 RUNDC1 (ENSSLDG00000016668) rpl27 (ENSSLDG00000016677) ifi35 (ENSSLDG00000016692) bcat2 (ENSSLDG00000016728) ENSSLDG00000016769 Seriola ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g.p ##22 Greater amberjack MODERN SPECIES 92 LMLN (ENSSDUG00000001930) ENSSDUG00000002002 ENSSDUG00000002018 ##22 ENOX1 (ENSSDUG00000002043) ENSSDUG00000002102 ENSSDUG00000002134 ENSSDUG00000002161 ENSSDUG00000002177 ENSSDUG00000002302 ENSSDUG00000002679 ENSSDUG00000002710 ENSSDUG00000002749 ENSSDUG00000002768 ENSSDUG00000002807 ENSSDUG00000003110 ENSSDUG00000003124 ENSSDUG00000003149 ENSSDUG00000003178 Barramundi perch MODERN SPECIES 273 GRIN2C (ENSLCAG00010013500) TMEM104 (ENSLCAG00010013510) ENSLCAG00010013520 tsen54 (ENSLCAG00010013531) ENSLCAG00010013539 ##22 suz12a (ENSLCAG00010013622) crlf3 (ENSLCAG00010013812) ENSLCAG00010013830 nde1 (ENSLCAG00010013839) ENSLCAG00010014562 gsg1l (ENSLCAG00010014565) ENSLCAG00010014568 flr (ENSLCAG00010014579) si:ch211-76l23.7 (ENSLCAG00010014597) alg1 (ENSLCAG00010014622) eef2kmt (ENSLCAG00010014671) pigq (ENSLCAG00010014678) rab40c (ENSLCAG00010014692) ENSLCAG00010014696 ENSLCAG00010014699 Ovalentaria ANCESTRAL SPECIES 1 ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Pomacentridae DUPLICATION Pomacentridae ANCESTRAL SPECIES 24 ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.q ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b.v ENSGT00940000166624 ENSGT01080000257420.C.b.b.c.a ENSGT01050000244905.B ENSGT00950000182910.b.g.b ENSGT00950000182881.a.a.b.i.b ENSGT00940000154014.b.a ENSGT00940000160415 ENSGT00940000165444 ENSGT00950000183116.a.b ENSGT00940000163949.b Pomacentridae_A ANCESTRAL SPECIES 15 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.q ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b.v ENSGT00940000166624 ENSGT01080000257420.C.b.b.c.a ENSGT01050000244905.B ENSGT00950000182910.b.g.b ENSGT00950000182881.a.a.b.i.b ENSGT00940000154014.b.a ENSGT00940000160415 ENSGT00940000165444 ENSGT00950000183116.a.b ENSGT00940000163949.b Amphiprion ANCESTRAL SPECIES 9 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.q ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b.v ENSGT00940000166624 ENSGT01080000257420.C.b.b.c.a ENSGT01050000244905.B ENSGT00950000182910.b.g.b ENSGT00950000182881.a.a.b.i.b ENSGT00940000154014.b.a ENSGT00940000160415 ENSGT00940000165444 ENSGT00950000183116.a.b ENSGT00940000163949.b Clown anemonefish MODERN SPECIES 2425 TMEM104 (ENSAOCG00000004315) tsen54 (ENSAOCG00000000152) ENSAOCG00000004271 ##22 Orange clownfish MODERN SPECIES 5 ENSAPEG00000019353 FOXK2 (ENSAPEG00000019344) hlfa (ENSAPEG00000019324) mmd (ENSAPEG00000019290) TMEM100 (ENSAPEG00000019273) pctp (ENSAPEG00000019237) nog1 (ENSAPEG00000019204) cbx2 (ENSAPEG00000019197) ENPP7 (ENSAPEG00000019172) ENSAPEG00000019125 RBFOX3 (ENSAPEG00000019081) GRIN2C (ENSAPEG00000019021) TMEM104 (ENSAPEG00000018968) ENSAPEG00000018961 tsen54 (ENSAPEG00000018931) ENSAPEG00000018917 ##22 suz12a (ENSAPEG00000018867) crlf3 (ENSAPEG00000018828) ENSAPEG00000018778 nde1 (ENSAPEG00000018733) ENSAPEG00000018629 ENSAPEG00000018610 stat5a (ENSAPEG00000018536) stat3 (ENSAPEG00000018366) CAVIN1 (ENSAPEG00000018341) atp6v0a1a (ENSAPEG00000018209) stk17al (ENSAPEG00000018172) hsd17b1 (ENSAPEG00000018034) si:ch73-141c7.1 (ENSAPEG00000018000) ENSAPEG00000017978 ENSAPEG00000017851 Spiny chromis MODERN SPECIES 916 GRIN2C (ENSAPOG00000009578) TMEM104 (ENSAPOG00000009632) tsen54 (ENSAPOG00000009659) ENSAPOG00000009668 ##22 suz12a (ENSAPOG00000009741) crlf3 (ENSAPOG00000009785) ENSAPOG00000009806 nde1 (ENSAPOG00000009839) ENSAPOG00000009986 ENSAPOG00000010004 Bicolor damselfish MODERN SPECIES 66 ENSSPAG00000015403 ##22 suz12a (ENSSPAG00000015413) crlf3 (ENSSPAG00000015466) ENSSPAG00000015484 nde1 (ENSSPAG00000015502) ENSSPAG00000015518 Pomacentridae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g.r ##22 Bicolor damselfish MODERN SPECIES 2262 galr2a (ENSSPAG00000002677) ENSSPAG00000002716 ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g.r ##22 Amphiprion ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g.r ##22 Orange clownfish MODERN SPECIES 10 ENSAPEG00000013069 ENSAPEG00000013080 ENSAPEG00000013088 ENSAPEG00000013097 ENSAPEG00000013105 ENSAPEG00000013113 pde6gb (ENSAPEG00000013124) ENSAPEG00000013143 gprc5c (ENSAPEG00000013146) ENSAPEG00000013155 GPR142 (ENSAPEG00000013167) BTBD17 (ENSAPEG00000013188) map2k6 (ENSAPEG00000013208) ENSAPEG00000013333 kcnj2a (ENSAPEG00000013344) ENSAPEG00000013432 ##22 galr2a (ENSAPEG00000013462) ENSAPEG00000013483 exoc7 (ENSAPEG00000013499) tvp23b (ENSAPEG00000013563) trim16 (ENSAPEG00000013588) FADS6 (ENSAPEG00000013600) USH1G (ENSAPEG00000013645) OTOP3 (ENSAPEG00000013667) HID1 (ENSAPEG00000013702) ENSAPEG00000013857 ENSAPEG00000013875 ENSAPEG00000013908 ENSAPEG00000013917 ENSAPEG00000013928 ENSAPEG00000013940 Cichlidae ANCESTRAL SPECIES 16 ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 223 ENSACIG00000018452 ENSACIG00000018444 dnal1 (ENSACIG00000018416) ENSACIG00000018404 rab40c (ENSACIG00000018394) pigq (ENSACIG00000018363) eef2kmt (ENSACIG00000018339) alg1 (ENSACIG00000018259) si:ch211-76l23.7 (ENSACIG00000018234) flr (ENSACIG00000018196) ENSACIG00000018183 gsg1l (ENSACIG00000018144) ENSACIG00000018128 ##22 ENSACIG00000018111 ENSACIG00000018028 nde1 (ENSACIG00000017994) ENSACIG00000017961 crlf3 (ENSACIG00000017938) suz12a (ENSACIG00000017759) ENSACIG00000017727 ##22 Midas cichlid MODERN SPECIES 223 ENSACIG00000017727 ##22 suz12a (ENSACIG00000017759) crlf3 (ENSACIG00000017938) ENSACIG00000017961 nde1 (ENSACIG00000017994) ENSACIG00000018028 ENSACIG00000018111 ENSACIG00000018128 ##22 gsg1l (ENSACIG00000018144) ENSACIG00000018183 flr (ENSACIG00000018196) si:ch211-76l23.7 (ENSACIG00000018234) alg1 (ENSACIG00000018259) eef2kmt (ENSACIG00000018339) pigq (ENSACIG00000018363) rab40c (ENSACIG00000018394) Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000177272 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 Haplochromini ANCESTRAL SPECIES 12 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 Burton s mouthbrooder MODERN SPECIES 332 ENSHBUG00000017854 ENSHBUG00000017863 FOXK2 (ENSHBUG00000017891) hlfa (ENSHBUG00000017921) mmd (ENSHBUG00000017949) TMEM100 (ENSHBUG00000017961) pctp (ENSHBUG00000017983) nog1 (ENSHBUG00000018026) cbx2 (ENSHBUG00000018031) ENPP7 (ENSHBUG00000018052) RBFOX3 (ENSHBUG00000018099) GRIN2C (ENSHBUG00000018147) TMEM104 (ENSHBUG00000018196) ENSHBUG00000018210 tsen54 (ENSHBUG00000018296) ENSHBUG00000018305 ##22 ENSHBUG00000018328 suz12a (ENSHBUG00000018404) crlf3 (ENSHBUG00000018428) ENSHBUG00000018471 nde1 (ENSHBUG00000018501) ENSHBUG00000018598 ENSHBUG00000018607 gsg1l (ENSHBUG00000018612) ENSHBUG00000018626 flr (ENSHBUG00000018686) si:ch211-76l23.7 (ENSHBUG00000018701) eef2kmt (ENSHBUG00000018733) alg1 (ENSHBUG00000000559) pigq (ENSHBUG00000018854) rab40c (ENSHBUG00000018881) Haplochromini_A ANCESTRAL SPECIES 33 ENSGT00940000176898 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 P. nyererei MODERN SPECIES 244 ENSPNYG00000005484 ##22 Haplochromini_B ANCESTRAL SPECIES 43 ENSGT00940000176898 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 Eastern happy MODERN SPECIES 16 SHISA6 (ENSACLG00000020305) ENSACLG00000020294 ENSACLG00000020281 FOXK2 (ENSACLG00000020247) hlfa (ENSACLG00000020233) mmd (ENSACLG00000020169) TMEM100 (ENSACLG00000020158) pctp (ENSACLG00000020152) nog1 (ENSACLG00000020126) cbx2 (ENSACLG00000020121) ENPP7 (ENSACLG00000020112) RBFOX3 (ENSACLG00000020011) GRIN2C (ENSACLG00000019920) TMEM104 (ENSACLG00000019880) tsen54 (ENSACLG00000019800) ENSACLG00000019792 ##22 ENSACLG00000019772 ##22 ENSACLG00000019755 ##22 suz12a (ENSACLG00000019686) crlf3 (ENSACLG00000019655) ENSACLG00000019630 nde1 (ENSACLG00000019623) ENSACLG00000019525 ENSACLG00000019511 ENSACLG00000019495 ENSACLG00000019490 gsg1l (ENSACLG00000019474) ENSACLG00000019407 flr (ENSACLG00000019339) ENSACLG00000019327 si:ch211-76l23.7 (ENSACLG00000019287) Nile tilapia MODERN SPECIES 16 SHISA6 (ENSONIG00000037454) ENSONIG00000039152 ENSONIG00000035239 FOXK2 (ENSONIG00000009564) hlfa (ENSONIG00000039549) mmd (ENSONIG00000030142) TMEM100 (ENSONIG00000021450) pctp (ENSONIG00000009559) cbx2 (ENSONIG00000033033) ENPP7 (ENSONIG00000009555) RBFOX3 (ENSONIG00000009549) GRIN2C (ENSONIG00000009548) TMEM104 (ENSONIG00000009546) ENSONIG00000036229 tsen54 (ENSONIG00000009543) ENSONIG00000009541 ##22 ENSONIG00000035037 ##22 ENSONIG00000009538 ##22 suz12a (ENSONIG00000009534) crlf3 (ENSONIG00000009532) ENSONIG00000038321 nde1 (ENSONIG00000009530) ENSONIG00000009489 ENSONIG00000036473 ENSONIG00000039710 ENSONIG00000009488 ENSONIG00000024229 flr (ENSONIG00000009478) si:ch211-76l23.7 (ENSONIG00000009475) alg1 (ENSONIG00000009470) eef2kmt (ENSONIG00000009469) Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a Haplochromini ANCESTRAL SPECIES 12 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a Haplochromini_A ANCESTRAL SPECIES 33 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 Haplochromini_B ANCESTRAL SPECIES 43 ENSGT00940000176040 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 Eastern happy MODERN SPECIES 16 ENSACLG00000020294 ENSACLG00000020281 FOXK2 (ENSACLG00000020247) hlfa (ENSACLG00000020233) mmd (ENSACLG00000020169) TMEM100 (ENSACLG00000020158) pctp (ENSACLG00000020152) nog1 (ENSACLG00000020126) cbx2 (ENSACLG00000020121) ENPP7 (ENSACLG00000020112) RBFOX3 (ENSACLG00000020011) GRIN2C (ENSACLG00000019920) TMEM104 (ENSACLG00000019880) tsen54 (ENSACLG00000019800) ENSACLG00000019792 ##22 ENSACLG00000019772 ##22 ENSACLG00000019755 ##22 suz12a (ENSACLG00000019686) crlf3 (ENSACLG00000019655) ENSACLG00000019630 nde1 (ENSACLG00000019623) ENSACLG00000019525 ENSACLG00000019511 ENSACLG00000019495 ENSACLG00000019490 gsg1l (ENSACLG00000019474) ENSACLG00000019407 flr (ENSACLG00000019339) ENSACLG00000019327 si:ch211-76l23.7 (ENSACLG00000019287) alg1 (ENSACLG00000019264) Zebra mbuna MODERN SPECIES 1107 STUB1 (ENSMZEG00005001503) JMJD8 (ENSMZEG00005001490) prss60.1 (ENSMZEG00005001473) hsp70.1 (ENSMZEG00005001469) ENSMZEG00005001418 cdipt (ENSMZEG00005001404) ENSMZEG00005001384 nlk1 (ENSMZEG00005001352) TLCD3B (ENSMZEG00005001345) sh2b1 (ENSMZEG00005001312) atxn2l (ENSMZEG00005001258) spns1 (ENSMZEG00005001227) ENSMZEG00005001214 sgf29 (ENSMZEG00005001194) nupr1b (ENSMZEG00005001177) ENSMZEG00005001160 ##22 ENSMZEG00005001155 ##22 suz12a (ENSMZEG00005001110) crlf3 (ENSMZEG00005001075) ENSMZEG00005001040 nde1 (ENSMZEG00005001018) ENSMZEG00005000908 tsen54 (ENSMZEG00005000884) TMEM104 (ENSMZEG00005000844) GRIN2C (ENSMZEG00005000799) RBFOX3 (ENSMZEG00005000781) ENPP7 (ENSMZEG00005000771) cbx2 (ENSMZEG00005000768) nog1 (ENSMZEG00005000723) pctp (ENSMZEG00005000713) TMEM100 (ENSMZEG00005000707) Nile tilapia MODERN SPECIES 16 ENSONIG00000039152 ENSONIG00000035239 FOXK2 (ENSONIG00000009564) hlfa (ENSONIG00000039549) mmd (ENSONIG00000030142) TMEM100 (ENSONIG00000021450) pctp (ENSONIG00000009559) cbx2 (ENSONIG00000033033) ENPP7 (ENSONIG00000009555) RBFOX3 (ENSONIG00000009549) GRIN2C (ENSONIG00000009548) TMEM104 (ENSONIG00000009546) ENSONIG00000036229 tsen54 (ENSONIG00000009543) ENSONIG00000009541 ##22 ENSONIG00000035037 ##22 ENSONIG00000009538 ##22 suz12a (ENSONIG00000009534) crlf3 (ENSONIG00000009532) ENSONIG00000038321 nde1 (ENSONIG00000009530) ENSONIG00000009489 ENSONIG00000036473 ENSONIG00000039710 ENSONIG00000009488 ENSONIG00000024229 flr (ENSONIG00000009478) si:ch211-76l23.7 (ENSONIG00000009475) alg1 (ENSONIG00000009470) eef2kmt (ENSONIG00000009469) pigq (ENSONIG00000009465) Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Nile tilapia MODERN SPECIES 16 ENSONIG00000035239 FOXK2 (ENSONIG00000009564) hlfa (ENSONIG00000039549) mmd (ENSONIG00000030142) TMEM100 (ENSONIG00000021450) pctp (ENSONIG00000009559) cbx2 (ENSONIG00000033033) ENPP7 (ENSONIG00000009555) RBFOX3 (ENSONIG00000009549) GRIN2C (ENSONIG00000009548) TMEM104 (ENSONIG00000009546) ENSONIG00000036229 tsen54 (ENSONIG00000009543) ENSONIG00000009541 ##22 ENSONIG00000035037 ##22 ENSONIG00000009538 ##22 suz12a (ENSONIG00000009534) crlf3 (ENSONIG00000009532) ENSONIG00000038321 nde1 (ENSONIG00000009530) ENSONIG00000009489 ENSONIG00000036473 ENSONIG00000039710 ENSONIG00000009488 ENSONIG00000024229 flr (ENSONIG00000009478) si:ch211-76l23.7 (ENSONIG00000009475) alg1 (ENSONIG00000009470) eef2kmt (ENSONIG00000009469) pigq (ENSONIG00000009465) ENSONIG00000021378 Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Lyretail cichlid MODERN SPECIES 375 SHISA6 (ENSNBRG00000010357) ENSNBRG00000010340 FOXK2 (ENSNBRG00000010290) hlfa (ENSNBRG00000010273) mmd (ENSNBRG00000010245) TMEM100 (ENSNBRG00000010239) pctp (ENSNBRG00000010213) nog1 (ENSNBRG00000010185) cbx2 (ENSNBRG00000010170) ENPP7 (ENSNBRG00000010157) ENSNBRG00000010151 RBFOX3 (ENSNBRG00000010102) GRIN2C (ENSNBRG00000010017) TMEM104 (ENSNBRG00000009982) tsen54 (ENSNBRG00000009963) ENSNBRG00000009953 ##22 suz12a (ENSNBRG00000009730) crlf3 (ENSNBRG00000009656) ENSNBRG00000009608 nde1 (ENSNBRG00000009537) ENSNBRG00000009432 ENSNBRG00000009419 gsg1l (ENSNBRG00000009388) ENSNBRG00000009374 flr (ENSNBRG00000009331) si:ch211-76l23.7 (ENSNBRG00000009294) alg1 (ENSNBRG00000009251) eef2kmt (ENSNBRG00000009228) pigq (ENSNBRG00000009176) rab40c (ENSNBRG00000009150) ENSNBRG00000009128 Haplochromini ANCESTRAL SPECIES 12 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a Burton s mouthbrooder MODERN SPECIES 266 ENSHBUG00000014806 ##22 Haplochromini_A ANCESTRAL SPECIES 33 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a P. nyererei DUPLICATION P. nyererei MODERN SPECIES 1261 ENSPNYG00000023846 ##22 ENSPNYG00000023845 ##22 P. nyererei MODERN SPECIES 1261 ENSPNYG00000023846 ##22 ENSPNYG00000023845 ##22 Haplochromini_B ANCESTRAL SPECIES 43 ENSGT00940000177272 ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g.u.a ##22 ENSGT01100000263515.a.b.a.b.a.g.u.b ##22 ENSGT01100000263515.a.b.a.b.a.g.v ##22 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a Zebra mbuna MODERN SPECIES 1107 JMJD8 (ENSMZEG00005001490) prss60.1 (ENSMZEG00005001473) hsp70.1 (ENSMZEG00005001469) ENSMZEG00005001418 cdipt (ENSMZEG00005001404) ENSMZEG00005001384 nlk1 (ENSMZEG00005001352) TLCD3B (ENSMZEG00005001345) sh2b1 (ENSMZEG00005001312) atxn2l (ENSMZEG00005001258) spns1 (ENSMZEG00005001227) ENSMZEG00005001214 sgf29 (ENSMZEG00005001194) nupr1b (ENSMZEG00005001177) ENSMZEG00005001160 ##22 ENSMZEG00005001155 ##22 suz12a (ENSMZEG00005001110) crlf3 (ENSMZEG00005001075) ENSMZEG00005001040 nde1 (ENSMZEG00005001018) ENSMZEG00005000908 tsen54 (ENSMZEG00005000884) TMEM104 (ENSMZEG00005000844) GRIN2C (ENSMZEG00005000799) RBFOX3 (ENSMZEG00005000781) ENPP7 (ENSMZEG00005000771) cbx2 (ENSMZEG00005000768) nog1 (ENSMZEG00005000723) pctp (ENSMZEG00005000713) TMEM100 (ENSMZEG00005000707) mmd (ENSMZEG00005000670) Eastern happy MODERN SPECIES 16 ENSACLG00000020281 FOXK2 (ENSACLG00000020247) hlfa (ENSACLG00000020233) mmd (ENSACLG00000020169) TMEM100 (ENSACLG00000020158) pctp (ENSACLG00000020152) nog1 (ENSACLG00000020126) cbx2 (ENSACLG00000020121) ENPP7 (ENSACLG00000020112) RBFOX3 (ENSACLG00000020011) GRIN2C (ENSACLG00000019920) TMEM104 (ENSACLG00000019880) tsen54 (ENSACLG00000019800) ENSACLG00000019792 ##22 ENSACLG00000019772 ##22 ENSACLG00000019755 ##22 suz12a (ENSACLG00000019686) crlf3 (ENSACLG00000019655) ENSACLG00000019630 nde1 (ENSACLG00000019623) ENSACLG00000019525 ENSACLG00000019511 ENSACLG00000019495 ENSACLG00000019490 gsg1l (ENSACLG00000019474) ENSACLG00000019407 flr (ENSACLG00000019339) ENSACLG00000019327 si:ch211-76l23.7 (ENSACLG00000019287) alg1 (ENSACLG00000019264) eef2kmt (ENSACLG00000019218) Atherinomorphae ANCESTRAL SPECIES 6 ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00940000155709.j ENSGT00940000162720.b.a.a.b Oryzias ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Oryzias_b ANCESTRAL SPECIES 11 ENSGT00940000157381.d ENSGT00940000163496.a ENSGT00940000164445.j ENSGT00940000158979.e.a ENSGT01070000253760.b.a.a.a.b.a.a.a.b.a ENSGT00940000154937 ENSGT00940000167070 ENSGT00940000166574 ENSGT00390000016127 ENSGT00390000001557 ENSGT00940000159512 ENSGT00390000014712.a.g.b ENSGT00940000163009.b.a.a.b.b.r.a.a.d.a ENSGT00940000163852.c.b.i.a.b ENSGT00940000163009.b.a.a.b.b.r.a.a.c ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00940000163009.b.a.a.b.b.r.a.b ENSGT00940000163852.c.b.j ENSGT00390000015789 ENSGT00940000154883.e.b ENSGT00390000012918.c ENSGT00940000167057 ENSGT00390000008825.b.b ENSGT00940000164514.b ENSGT00390000012605 ENSGT00940000164626.b.a.a.b ENSGT00940000162543 ENSGT00940000156268.a.a ENSGT00940000166074.A ENSGT01050000244814.a.b.b ENSGT00390000014840.b Javanese ricefish MODERN SPECIES 22 ENSOJAG00000002155 ENSOJAG00000002147 ENSOJAG00000002141 ENSOJAG00000002122 rab40c (ENSOJAG00000002094) ENSOJAG00000002074 arl6ip1 (ENSOJAG00000002027) ENSOJAG00000002000 ENSOJAG00000001986 rnf25 (ENSOJAG00000001894) kat8 (ENSOJAG00000001801) ENSOJAG00000001778 zgc:100868 (ENSOJAG00000001765) zgc:100868 (ENSOJAG00000001639) ENSOJAG00000001599 ENSOJAG00000001584 ##22 zgc:100868 (ENSOJAG00000001513) ENSOJAG00000001444 zgc:100868 (ENSOJAG00000001405) eif1 (ENSOJAG00000001377) srsf2b (ENSOJAG00000001369) mfsd11 (ENSOJAG00000001347) ENSOJAG00000001331 ubald2 (ENSOJAG00000001318) ENSOJAG00000001311 amdhd2 (ENSOJAG00000001278) GAS7 (ENSOJAG00000001219) rcvrna (ENSOJAG00000001212) ENSOJAG00000001209 ENSOJAG00000001202 dhrs7ca (ENSOJAG00000001195) Indian medaka MODERN SPECIES 9 rab40c (ENSOMEG00000015316) ENSOMEG00000015346 arl6ip1 (ENSOMEG00000015367) ENSOMEG00000015409 ENSOMEG00000015474 anapc2 (ENSOMEG00000015519) rnf25 (ENSOMEG00000015780) kat8 (ENSOMEG00000015927) ENSOMEG00000015973 ENSOMEG00000015990 zgc:100868 (ENSOMEG00000016053) zgc:100868 (ENSOMEG00000016090) zgc:100868 (ENSOMEG00000016117) zgc:100868 (ENSOMEG00000016139) zgc:100868 (ENSOMEG00000016164) ENSOMEG00000016342 ##22 zgc:100868 (ENSOMEG00000016413) ENSOMEG00000016438 eif1 (ENSOMEG00000016467) srsf2b (ENSOMEG00000016488) mfsd11 (ENSOMEG00000016541) ubald2 (ENSOMEG00000016569) ENSOMEG00000016585 amdhd2 (ENSOMEG00000016607) ENSOMEG00000016623 ENSOMEG00000016629 GAS7 (ENSOMEG00000016781) rcvrna (ENSOMEG00000016839) ENSOMEG00000016859 ENSOMEG00000016875 dhrs7ca (ENSOMEG00000016948) Oryzias_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Chinese medaka MODERN SPECIES 4398 ENSOSIG00000005391 ##22 Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00940000155709.j ENSGT00940000162720.b.a.a.b Aplocheiloidei ANCESTRAL SPECIES 151 ENSGT00940000162720.b.a.a.b ENSGT00940000155709.j ENSGT00940000156555.i.b ENSGT00940000157428 ENSGT00940000154322.A.b.a ENSGT00940000156843 ENSGT00390000006009.a.a.a.c.b ENSGT00940000158816.c ENSGT00940000159339.sb.b.b ENSGT00940000159924.c.b ENSGT00940000156964.B ENSGT00390000001244 ENSGT00940000163471.a.d ENSGT00940000163471.a.c ENSGT00390000004214 ENSGT01100000263515.a.b.a.b.a.g ##22 Mangrove rivulus MODERN SPECIES 47 rpl27 (ENSKMAG00000007539) RUNDC1 (ENSKMAG00000007520) ENSKMAG00000007455 slc25a39 (ENSKMAG00000007422) ENSKMAG00000007369 rpl3 (ENSKMAG00000007253) CACNG2 (ENSKMAG00000007228) ENSKMAG00000007212 ENSKMAG00000007198 eif3d (ENSKMAG00000007133) ENSKMAG00000007114 ENSKMAG00000007082 ENSKMAG00000007053 grap2a (ENSKMAG00000007030) radil2a (ENSKMAG00000006981) ENSKMAG00000006966 ##22 tsen54 (ENSKMAG00000006944) ENSKMAG00000006922 ENSKMAG00000006906 TMEM104 (ENSKMAG00000006857) GRIN2C (ENSKMAG00000006795) RBFOX3 (ENSKMAG00000006726) ENPP7 (ENSKMAG00000006680) cbx2 (ENSKMAG00000006666) nog1 (ENSKMAG00000006638) ENSKMAG00000006622 pctp (ENSKMAG00000006591) TMEM100 (ENSKMAG00000006572) mmd (ENSKMAG00000006535) hlfa (ENSKMAG00000006498) FOXK2 (ENSKMAG00000006457) Turquoise killifish MODERN SPECIES 532 ENSNFUG00015015359 ENSNFUG00015015369 TSEN54 (ENSNFUG00015015381) ENSNFUG00015015410 ##22 Cyprinodontoidei ANCESTRAL SPECIES 38 ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00390000001557 ENSGT00940000159417 NAME_4 ANCESTRAL SPECIES 144 ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00390000001557 ENSGT00940000159417 ENSGT01100000263847 ENSGT00950000182818.D Mummichog DUPLICATION Mummichog DUPLICATION Mummichog DUPLICATION Mummichog DUPLICATION Mummichog MODERN SPECIES 676 gsg1l (ENSFHEG00000005228) ENSFHEG00000005251 ENSFHEG00000000692 nde1 (ENSFHEG00000005315) ENSFHEG00000005330 crlf3 (ENSFHEG00000005371) ENSFHEG00000005385 ##22 SUZ12 (ENSFHEG00000005426) ENSFHEG00000005446 ##22 ENSFHEG00000005453 ##22 ENSFHEG00000005463 ##22 tsen54 (ENSFHEG00000005470) Mummichog MODERN SPECIES 1805 ENSFHEG00000006736 ##22 Mummichog MODERN SPECIES 676 gsg1l (ENSFHEG00000005228) ENSFHEG00000005251 ENSFHEG00000000692 nde1 (ENSFHEG00000005315) ENSFHEG00000005330 crlf3 (ENSFHEG00000005371) ENSFHEG00000005385 ##22 SUZ12 (ENSFHEG00000005426) ENSFHEG00000005446 ##22 ENSFHEG00000005453 ##22 ENSFHEG00000005463 ##22 tsen54 (ENSFHEG00000005470) Mummichog MODERN SPECIES 676 tsen54 (ENSFHEG00000005470) ENSFHEG00000005463 ##22 ENSFHEG00000005453 ##22 ENSFHEG00000005446 ##22 SUZ12 (ENSFHEG00000005426) ENSFHEG00000005385 ##22 crlf3 (ENSFHEG00000005371) ENSFHEG00000005330 nde1 (ENSFHEG00000005315) ENSFHEG00000000692 ENSFHEG00000005251 gsg1l (ENSFHEG00000005228) Mummichog MODERN SPECIES 676 tsen54 (ENSFHEG00000005470) ENSFHEG00000005463 ##22 ENSFHEG00000005453 ##22 ENSFHEG00000005446 ##22 SUZ12 (ENSFHEG00000005426) ENSFHEG00000005385 ##22 crlf3 (ENSFHEG00000005371) ENSFHEG00000005330 nde1 (ENSFHEG00000005315) ENSFHEG00000000692 ENSFHEG00000005251 gsg1l (ENSFHEG00000005228) Sheepshead minnow DUPLICATION Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 303 RBFOX3 (ENSCVAG00000006882) GRIN2C (ENSCVAG00000006870) TMEM104 (ENSCVAG00000006771) ENSCVAG00000006749 ENSCVAG00000006741 ENSCVAG00000006703 ##22 ENSCVAG00000006697 ##22 ENSCVAG00000006688 suz12a (ENSCVAG00000006676) crlf3 (ENSCVAG00000006634) MPV17L (ENSCVAG00000006588) ENSCVAG00000006571 nde1 (ENSCVAG00000006466) Sheepshead minnow MODERN SPECIES 303 RBFOX3 (ENSCVAG00000006882) GRIN2C (ENSCVAG00000006870) TMEM104 (ENSCVAG00000006771) ENSCVAG00000006749 ENSCVAG00000006741 ENSCVAG00000006703 ##22 ENSCVAG00000006697 ##22 ENSCVAG00000006688 suz12a (ENSCVAG00000006676) crlf3 (ENSCVAG00000006634) MPV17L (ENSCVAG00000006588) ENSCVAG00000006571 nde1 (ENSCVAG00000006466) Sheepshead minnow MODERN SPECIES 2315 ENSCVAG00000009498 ##22 Poeciliinae ANCESTRAL SPECIES 1 ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00390000001557 ENSGT00940000159417.`b.a Platyfish MODERN SPECIES 7 pigq (ENSXMAG00000013137) eef2kmt (ENSXMAG00000013132) alg1 (ENSXMAG00000013119) si:ch211-76l23.7 (ENSXMAG00000023440) flr (ENSXMAG00000013083) ENSXMAG00000025153 gsg1l (ENSXMAG00000026723) ENSXMAG00000025703 ENSXMAG00000013072 ENSXMAG00000021365 ENSXMAG00000012995 nde1 (ENSXMAG00000021101) MPV17L (ENSXMAG00000012988) crlf3 (ENSXMAG00000012986) suz12a (ENSXMAG00000012979) ENSXMAG00000021514 ##22 tsen54 (ENSXMAG00000018818) TMEM104 (ENSXMAG00000026327) GRIN2C (ENSXMAG00000012966) RBFOX3 (ENSXMAG00000012939) ENPP7 (ENSXMAG00000012928) cbx2 (ENSXMAG00000024155) nog1 (ENSXMAG00000019939) pctp (ENSXMAG00000012916) TMEM100 (ENSXMAG00000019486) mmd (ENSXMAG00000028629) hlfa (ENSXMAG00000012903) rnf25 (ENSXMAG00000010583) SCN4A (ENSXMAG00000012780) ENSXMAG00000028720 SCN4A (ENSXMAG00000025952) Poecilia ANCESTRAL SPECIES 8 ENSGT00940000158979.e.a ENSGT00390000004994 ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.b ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00390000001557 ENSGT00940000159417.`b.a Guppy MODERN SPECIES 448 S100P (ENSPREG00000021912) ENSPREG00000021921 ENSPREG00000021925 SLC29A2 (ENSPREG00000021932) PPP1CB (ENSPREG00000021947) rela (ENSPREG00000021967) zgc:63470 (ENSPREG00000021977) drap1 (ENSPREG00000021987) MAP3K11 (ENSPREG00000022005) ENSPREG00000022028 ENSPREG00000022040 ENSPREG00000022053 ENSPREG00000022074 ENSPREG00000022083 RASGRP2 (ENSPREG00000022093) ENSPREG00000000571 ##22 ALPK1 (ENSPREG00000000599) ENSPREG00000000667 ENSPREG00000000696 epdl1 (ENSPREG00000000739) cskmt (ENSPREG00000000773) otub1b (ENSPREG00000000776) ENSPREG00000000818 ENSPREG00000000864 ndufs2 (ENSPREG00000000871) kirrel1a (ENSPREG00000000886) dock11 (ENSPREG00000001054) haus4 (ENSPREG00000002010) fxr2 (ENSPREG00000002076) rbm4.3 (ENSPREG00000002093) ENSPREG00000002131 NAME_6 ANCESTRAL SPECIES 18 ENSGT00390000004994.q ENSGT00940000164788 ENSGT00390000008647 ENSGT00390000013433 ENSGT00390000010116 ENSGT00410000026495.A ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.b ENSGT01050000244814.a.a.a.a.a.a ENSGT00940000166624 ENSGT00940000155421.a.b ENSGT00390000000111.b.a.b ENSGT00730000111088.b ENSGT00940000153469.a.b ENSGT00390000012364.a ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000004214 ENSGT00940000163471.a.c ENSGT00940000163471.a.d ENSGT00390000001244 ENSGT00940000156964.B ENSGT00940000159924.c.b ENSGT00940000159339.sb.b.b ENSGT00940000158816.c ENSGT00390000006009.a.a.a.c.b ENSGT00940000156843 ENSGT00940000154322.A.b.a ENSGT00940000157428 ENSGT00940000156555.i.b ENSGT00390000001557 ENSGT00940000159417.`b.a Amazon molly MODERN SPECIES 420 ENSPFOG00000018540 ENSPFOG00000018539 gsg1l (ENSPFOG00000018527) ENSPFOG00000024590 ENSPFOG00000018480 nde1 (ENSPFOG00000018448) ENSPFOG00000018446 crlf3 (ENSPFOG00000018439) suz12a (ENSPFOG00000018400) ENSPFOG00000023203 ENSPFOG00000018390 ##22 tsen54 (ENSPFOG00000022740) ENSPFOG00000018372 ENSPFOG00000018367 TMEM104 (ENSPFOG00000018352) GRIN2C (ENSPFOG00000018336) RBFOX3 (ENSPFOG00000018294) ENPP7 (ENSPFOG00000018272) cbx2 (ENSPFOG00000018266) nog1 (ENSPFOG00000020805) pctp (ENSPFOG00000018255) SMIM36 (ENSPFOG00000024052) mmd (ENSPFOG00000018243) hlfa (ENSPFOG00000018222) rnf25 (ENSPFOG00000018212) SCN4A (ENSPFOG00000018180) Sailfin molly MODERN SPECIES 906 ENSPLAG00000014642 ENSPLAG00000000342 ENSPLAG00000014693 nde1 (ENSPLAG00000014702) ENSPLAG00000014720 crlf3 (ENSPLAG00000014747) suz12a (ENSPLAG00000014814) ENSPLAG00000014841 ##22 tsen54 (ENSPLAG00000014847) TMEM104 (ENSPLAG00000014878) ENSPLAG00000015007 ENSPLAG00000015173 Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 14 ENSGMOG00000036700 ENSGMOG00000036158 ENSGMOG00000024312 necap1 (ENSGMOG00000006229) ENSGMOG00000032330 si:ch211-232m10.6 (ENSGMOG00000006237) ENSGMOG00000033948 rcvrn3 (ENSGMOG00000006260) ENSGMOG00000035486 ccdc106b (ENSGMOG00000030698) cnot3b (ENSGMOG00000027580) ENSGMOG00000030805 ENSGMOG00000033068 dbpa (ENSGMOG00000022826) ENSGMOG00000031882 ENSGMOG00000005608 ##22 ENSGMOG00000023309 ##22 ENSGMOG00000035093 ENSGMOG00000026777 slc2a3a (ENSGMOG00000023964) ENSGMOG00000036562 ENSGMOG00000027191 ENSGMOG00000030329 ENSGMOG00000035267 ENSGMOG00000022208 ENSGMOG00000015445 ENSGMOG00000026526 ENSGMOG00000037043 ENSGMOG00000017923 ENSGMOG00000025818 ENSGMOG00000028858 Cod MODERN SPECIES 14 ENSGMOG00000036158 ENSGMOG00000024312 necap1 (ENSGMOG00000006229) ENSGMOG00000032330 si:ch211-232m10.6 (ENSGMOG00000006237) ENSGMOG00000033948 rcvrn3 (ENSGMOG00000006260) ENSGMOG00000035486 ccdc106b (ENSGMOG00000030698) cnot3b (ENSGMOG00000027580) ENSGMOG00000030805 ENSGMOG00000033068 dbpa (ENSGMOG00000022826) ENSGMOG00000031882 ENSGMOG00000005608 ##22 ENSGMOG00000023309 ##22 ENSGMOG00000035093 ENSGMOG00000026777 slc2a3a (ENSGMOG00000023964) ENSGMOG00000036562 ENSGMOG00000027191 ENSGMOG00000030329 ENSGMOG00000035267 ENSGMOG00000022208 ENSGMOG00000015445 ENSGMOG00000026526 ENSGMOG00000037043 ENSGMOG00000017923 ENSGMOG00000025818 ENSGMOG00000028858 ENSGMOG00000024518 Cod DUPLICATION Cod MODERN SPECIES ENSGMOG00000008405 ENSGMOG00000008407 ENSGMOG00000008410 ENSGMOG00000036919 NADK (ENSGMOG00000008413) ENSGMOG00000018785 ENSGMOG00000003596 ENSGMOG00000022275 ENSGMOG00000026474 ENSGMOG00000025158 ENSGMOG00000015826 ENSGMOG00000022175 dffb (ENSGMOG00000013261) ENSGMOG00000033031 ENSGMOG00000032675 ##22 ENSGMOG00000022392 ##22 ENSGMOG00000015493 b3gnt7l (ENSGMOG00000015608) ENSGMOG00000015625 lrrc47 (ENSGMOG00000015674) ENSGMOG00000025068 mad2l2 (ENSGMOG00000001175) ENSGMOG00000032193 ENSGMOG00000002321 tmem115 (ENSGMOG00000002381) ENSGMOG00000029834 sema3h (ENSGMOG00000002408) borcs6 (ENSGMOG00000024796) ENSGMOG00000013442 xpc (ENSGMOG00000019246) arih2 (ENSGMOG00000019261) Cod MODERN SPECIES ENSGMOG00000008404 ENSGMOG00000008405 ENSGMOG00000008407 ENSGMOG00000008410 ENSGMOG00000036919 NADK (ENSGMOG00000008413) ENSGMOG00000018785 ENSGMOG00000003596 ENSGMOG00000022275 ENSGMOG00000026474 ENSGMOG00000025158 ENSGMOG00000015826 ENSGMOG00000022175 dffb (ENSGMOG00000013261) ENSGMOG00000033031 ENSGMOG00000032675 ##22 ENSGMOG00000022392 ##22 ENSGMOG00000015493 b3gnt7l (ENSGMOG00000015608) ENSGMOG00000015625 lrrc47 (ENSGMOG00000015674) ENSGMOG00000025068 mad2l2 (ENSGMOG00000001175) ENSGMOG00000032193 ENSGMOG00000002321 tmem115 (ENSGMOG00000002381) ENSGMOG00000029834 sema3h (ENSGMOG00000002408) borcs6 (ENSGMOG00000024796) ENSGMOG00000013442 xpc (ENSGMOG00000019246) Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Northern pike DUPLICATION Northern pike DUPLICATION Northern pike MODERN SPECIES 21 sumo1 (ENSELUG00000018738) MAP3K2 (ENSELUG00000018797) ENSELUG00000028571 ENSELUG00000018822 tmem198b (ENSELUG00000018835) desmb (ENSELUG00000018874) RBMS1 (ENSELUG00000018923) ITGB6 (ENSELUG00000018949) PLA2R1 (ENSELUG00000019037) LY75 (ENSELUG00000019195) marchf7 (ENSELUG00000019222) ENSELUG00000026157 ENSELUG00000019577 ##22 ENSELUG00000031041 ENSELUG00000027393 ENSELUG00000019595 ##22 wdsub1 (ENSELUG00000019642) ENSELUG00000019725 ENSELUG00000019828 si:dkey-276j7.1 (ENSELUG00000019885) fhl2b (ENSELUG00000019918) dph3 (ENSELUG00000019946) nck2b (ENSELUG00000019964) ECRG4 (ENSELUG00000033126) ENSELUG00000020002 st6gal2b (ENSELUG00000020025) OSBPL11 (ENSELUG00000020068) gpd1c (ENSELUG00000020097) NCKAP5 (ENSELUG00000020214) LYPD1 (ENSELUG00000020286) ENSELUG00000020305 Northern pike MODERN SPECIES 21 ALS2 (ENSELUG00000018653) cdk15 (ENSELUG00000018693) FZD7 (ENSELUG00000018707) sumo1 (ENSELUG00000018738) MAP3K2 (ENSELUG00000018797) ENSELUG00000028571 ENSELUG00000018822 tmem198b (ENSELUG00000018835) desmb (ENSELUG00000018874) RBMS1 (ENSELUG00000018923) ITGB6 (ENSELUG00000018949) PLA2R1 (ENSELUG00000019037) LY75 (ENSELUG00000019195) marchf7 (ENSELUG00000019222) ENSELUG00000026157 ENSELUG00000019577 ##22 ENSELUG00000031041 ENSELUG00000027393 ENSELUG00000019595 ##22 wdsub1 (ENSELUG00000019642) ENSELUG00000019725 ENSELUG00000019828 si:dkey-276j7.1 (ENSELUG00000019885) fhl2b (ENSELUG00000019918) dph3 (ENSELUG00000019946) nck2b (ENSELUG00000019964) ECRG4 (ENSELUG00000033126) ENSELUG00000020002 st6gal2b (ENSELUG00000020025) OSBPL11 (ENSELUG00000020068) gpd1c (ENSELUG00000020097) Northern pike DUPLICATION Northern pike DUPLICATION Northern pike DUPLICATION Northern pike MODERN SPECIES 9 ago2 (ENSELUG00000019378) chrac1 (ENSELUG00000019288) gatad1 (ENSELUG00000034426) ENSELUG00000001211 lrrc14b (ENSELUG00000000823) QCR7 (ENSELUG00000032559) mterf3 (ENSELUG00000019194) PTDSS1 (ENSELUG00000019160) nup153 (ENSELUG00000019108) NANOS2 (ENSELUG00000019091) ENSELUG00000000809 ENSELUG00000000808 ENSELUG00000027674 ENSELUG00000028798 ##22 ENSELUG00000012134 ##22 ENSELUG00000033412 ##22 ENSELUG00000030961 ##22 fam49al (ENSELUG00000018965) hpcal4 (ENSELUG00000018870) nt5c1aa (ENSELUG00000018854) hpca (ENSELUG00000018829) ENSELUG00000003126 ENSELUG00000018796 ENSELUG00000018772 zgc:91944 (ENSELUG00000018697) ENSELUG00000018816 khdrbs1b (ENSELUG00000018597) KPNA6 (ENSELUG00000018566) txlna (ENSELUG00000000795) eif3i (ENSELUG00000018522) hdac1 (ENSELUG00000000791) Northern pike MODERN SPECIES 9 marcksl1b (ENSELUG00000001191) hdac1 (ENSELUG00000000791) eif3i (ENSELUG00000018522) txlna (ENSELUG00000000795) KPNA6 (ENSELUG00000018566) khdrbs1b (ENSELUG00000018597) ENSELUG00000018816 zgc:91944 (ENSELUG00000018697) ENSELUG00000018772 ENSELUG00000018796 ENSELUG00000003126 hpca (ENSELUG00000018829) nt5c1aa (ENSELUG00000018854) hpcal4 (ENSELUG00000018870) fam49al (ENSELUG00000018965) ENSELUG00000030961 ##22 ENSELUG00000033412 ##22 ENSELUG00000012134 ##22 ENSELUG00000028798 ##22 ENSELUG00000027674 ENSELUG00000000808 ENSELUG00000000809 NANOS2 (ENSELUG00000019091) nup153 (ENSELUG00000019108) PTDSS1 (ENSELUG00000019160) mterf3 (ENSELUG00000019194) QCR7 (ENSELUG00000032559) lrrc14b (ENSELUG00000000823) ENSELUG00000001211 gatad1 (ENSELUG00000034426) chrac1 (ENSELUG00000019288) Northern pike MODERN SPECIES 9 dlx5a (ENSELUG00000019396) ago2 (ENSELUG00000019378) chrac1 (ENSELUG00000019288) gatad1 (ENSELUG00000034426) ENSELUG00000001211 lrrc14b (ENSELUG00000000823) QCR7 (ENSELUG00000032559) mterf3 (ENSELUG00000019194) PTDSS1 (ENSELUG00000019160) nup153 (ENSELUG00000019108) NANOS2 (ENSELUG00000019091) ENSELUG00000000809 ENSELUG00000000808 ENSELUG00000027674 ENSELUG00000028798 ##22 ENSELUG00000012134 ##22 ENSELUG00000033412 ##22 ENSELUG00000030961 ##22 fam49al (ENSELUG00000018965) hpcal4 (ENSELUG00000018870) nt5c1aa (ENSELUG00000018854) hpca (ENSELUG00000018829) ENSELUG00000003126 ENSELUG00000018796 ENSELUG00000018772 zgc:91944 (ENSELUG00000018697) ENSELUG00000018816 khdrbs1b (ENSELUG00000018597) KPNA6 (ENSELUG00000018566) txlna (ENSELUG00000000795) eif3i (ENSELUG00000018522) Northern pike MODERN SPECIES 9 dlx6a (ENSELUG00000000833) dlx5a (ENSELUG00000019396) ago2 (ENSELUG00000019378) chrac1 (ENSELUG00000019288) gatad1 (ENSELUG00000034426) ENSELUG00000001211 lrrc14b (ENSELUG00000000823) QCR7 (ENSELUG00000032559) mterf3 (ENSELUG00000019194) PTDSS1 (ENSELUG00000019160) nup153 (ENSELUG00000019108) NANOS2 (ENSELUG00000019091) ENSELUG00000000809 ENSELUG00000000808 ENSELUG00000027674 ENSELUG00000028798 ##22 ENSELUG00000012134 ##22 ENSELUG00000033412 ##22 ENSELUG00000030961 ##22 fam49al (ENSELUG00000018965) hpcal4 (ENSELUG00000018870) nt5c1aa (ENSELUG00000018854) hpca (ENSELUG00000018829) ENSELUG00000003126 ENSELUG00000018796 ENSELUG00000018772 zgc:91944 (ENSELUG00000018697) ENSELUG00000018816 khdrbs1b (ENSELUG00000018597) KPNA6 (ENSELUG00000018566) txlna (ENSELUG00000000795) Salmoninae ANCESTRAL SPECIES 42 ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b ENSGT00390000005106.n ENSGT00940000153116.A ENSGT00950000182914.a.a.b.d ENSGT00940000157799.h ENSGT00940000166932.e ENSGT00940000158433.n ENSGT00940000156275.f.d ENSGT00950000182858.C.l ENSGT00940000169116 Huchen MODERN SPECIES 2697 ENSHHUG00000044448 ENSHHUG00000044452 ENSHHUG00000044576 ENSHHUG00000044578 ##22 rpn2 (ENSHHUG00000044585) mybl2b (ENSHHUG00000045017) ift52 (ENSHHUG00000045037) nme4 (ENSHHUG00000045050) srsf6b (ENSHHUG00000045056) ENSHHUG00000045072 ENSHHUG00000045087 Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00890000139436.A.a.b ENSGT00940000167138.a ENSGT00390000013995.b.a.ab ENSGT00940000177762 ENSGT00940000158065.f ENSGT00940000162859.o.f ENSGT00950000183062.a.a.a.b ENSGT00940000155198.A.f.a.a ENSGT00940000155198.A.f.b ENSGT00940000155198.A.f.a.b ENSGT00940000165371.a.f ENSGT00940000155198.B.h ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b ENSGT00390000005106.n ENSGT00940000153116.A ENSGT00950000182914.a.a.b.d ENSGT00940000157799.h ENSGT00940000166932.e ENSGT00940000158433.n ENSGT00940000156275.f.d ENSGT00950000182858.C.l ENSGT00950000182696.B.b.a.c Salmo ANCESTRAL SPECIES 33 ENSGT00890000139436.A.a.b ENSGT00940000167138.a ENSGT00390000013995.b.a.ab ENSGT00940000177762 ENSGT00940000158065.f ENSGT00940000162859.o.f ENSGT00950000183062.a.a.a.b ENSGT00940000155198.A.f.b ENSGT00940000165371.a.f ENSGT00940000155198.B.h ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01060000248883.a.a.a.a ENSGT00940000163346.a.j ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00990000212810 ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b ENSGT00390000005106.n ENSGT00940000153116.A ENSGT00950000182914.a.a.b.d ENSGT00940000157799.h ENSGT00940000166932.e ENSGT00940000158433.n ENSGT00940000156275.f.d ENSGT00950000182858.C.l Atlantic salmon MODERN SPECIES 3 ENSSSAG00000098079 pdzrn3b (ENSSSAG00000103526) ENSSSAG00000078049 ENSSSAG00000078091 ENSSSAG00000078592 ENSSSAG00000079074 ENSSSAG00000090029 cntn4 (ENSSSAG00000080512) ENSSSAG00000080978 ENSSSAG00000111876 ENSSSAG00000083264 ENSSSAG00000110673 ENSSSAG00000093094 ENSSSAG00000080989 ENSSSAG00000086990 ENSSSAG00000089497 ##22 ENSSSAG00000080999 ENSSSAG00000081010 ENSSSAG00000082872 ENSSSAG00000112784 ENSSSAG00000081018 RASSF5 (ENSSSAG00000103465) ENSSSAG00000107169 ikbke (ENSSSAG00000081027) srgap2 (ENSSSAG00000074495) ENSSSAG00000095856 ENSSSAG00000083662 zgc:101564 (ENSSSAG00000098451) ENSSSAG00000081172 ENSSSAG00000081234 ENSSSAG00000118084 River trout MODERN SPECIES 5 gpr27 (ENSSTUG00000014479) prok2 (ENSSTUG00000014470) RYBP (ENSSTUG00000014455) ENSSTUG00000014447 gxylt2 (ENSSTUG00000014423) ppp4r2b (ENSSTUG00000014392) pdzrn3b (ENSSTUG00000014367) ENSSTUG00000014263 ENSSTUG00000010027 ENSSTUG00000007621 cntn4 (ENSSTUG00000003421) ENSSTUG00000001843 ENSSTUG00000001732 ENSSTUG00000001724 ENSSTUG00000001658 ENSSTUG00000001639 ##22 rpn2 (ENSSTUG00000001495) mybl2b (ENSSTUG00000001451) nme4 (ENSSTUG00000001423) ENSSTUG00000001417 RASSF5 (ENSSTUG00000001403) ikbke (ENSSTUG00000031086) srgap2 (ENSSTUG00000031041) zgc:101564 (ENSSTUG00000031032) odad1 (ENSSTUG00000031024) slc45a1 (ENSSTUG00000030991) MMEL1 (ENSSTUG00000027363) tnfrsf1b (ENSSTUG00000027254) trim62.1 (ENSSTUG00000027230) znf362a (ENSSTUG00000027213) A3GALT2 (ENSSTUG00000027207) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000155865.c.b ENSGT00890000139436.A.a.b ENSGT00940000167138.a ENSGT00390000013995.b.a.ab ENSGT00940000177762 ENSGT00940000158065.f ENSGT00940000162859.o.f ENSGT00950000183062.a.a.a.b ENSGT00940000155198.A.f.a.a ENSGT00940000155198.A.f.a.b ENSGT00940000165371.a.f ENSGT00940000155198.B.h ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b ENSGT00390000005106.n ENSGT00940000153116.A ENSGT00950000182914.a.a.b.d ENSGT00940000157799.h ENSGT00940000166932.e ENSGT00940000158433.n ENSGT00940000156275.f.d ENSGT00950000182858.C.l ENSGT00950000182696.B.b.a.c Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00890000139436.A.a.b ENSGT00390000013995.b.a.ab ENSGT00940000177762 ENSGT00940000158065.f ENSGT00940000162859.o.f ENSGT00950000183062.a.a.a.b ENSGT00940000155198.A.f.a.a ENSGT00940000155198.A.f.a.b ENSGT00940000165371.a.f ENSGT00940000155198.B.h ENSGT00940000164786.a.g.b ENSGT00940000158442.l ENSGT01060000248883.b ENSGT00940000163346.a.i.b.b.a ENSGT01100000263545.a.b.c.a.r ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT00390000002635.d ENSGT00940000156091.b.g ENSGT00940000160286.ib ENSGT00940000159288.g ENSGT00950000182937.B.a.i ENSGT00950000182824.a.a.b.b.f.b ENSGT00390000005106.n ENSGT00940000153116.A ENSGT00950000182914.a.a.b.d ENSGT00940000157799.h ENSGT00940000166932.e ENSGT00940000158433.n ENSGT00940000156275.f.d ENSGT00950000182858.C.l ENSGT00950000182696.B.b.a.c Chinook salmon MODERN SPECIES 11 gpr27 (ENSOTSG00005004228) RYBP (ENSOTSG00005004229) gxylt2 (ENSOTSG00005004230) ppp4r2b (ENSOTSG00005004231) pdzrn3b (ENSOTSG00005004234) ENSOTSG00005004235 ENSOTSG00005004237 ENSOTSG00005004272 CNTN4 (ENSOTSG00005010550) ENSOTSG00005016602 cntn4 (ENSOTSG00005016608) ENSOTSG00005022408 ENSOTSG00005022428 ENSOTSG00005022429 ENSOTSG00005022431 ENSOTSG00005022540 ##22 rpn2 (ENSOTSG00005022542) mybl2b (ENSOTSG00005025075) zgc:101564 (ENSOTSG00005025080) odad1 (ENSOTSG00005025082) slc45a1 (ENSOTSG00005025087) ENSOTSG00005025098 MMEL1 (ENSOTSG00005025135) tnfrsf1b (ENSOTSG00005030350) trim62.1 (ENSOTSG00005030359) znf362a (ENSOTSG00005030379) A3GALT2 (ENSOTSG00005030380) EMP3 (ENSOTSG00005030381) ppcs (ENSOTSG00005030382) FOXJ3 (ENSOTSG00005030383) PRDM2 (ENSOTSG00005030425) Coho salmon MODERN SPECIES gpr27 (ENSOKIG00005011072) ENSOKIG00005011059 RYBP (ENSOKIG00005011042) ENSOKIG00005011034 gxylt2 (ENSOKIG00005011018) ppp4r2b (ENSOKIG00005010978) pdzrn3b (ENSOKIG00005010911) ENSOKIG00005010875 ENSOKIG00005006688 ENSOKIG00005003652 cntn4 (ENSOKIG00005001800) ENSOKIG00005001615 ENSOKIG00005001586 ENSOKIG00005001578 ENSOKIG00005001565 ENSOKIG00005001557 ##22 rpn2 (ENSOKIG00005001481) MYBL2 (ENSOKIG00005001420) nme4 (ENSOKIG00005001407) RASSF5 (ENSOKIG00005001398) ikbke (ENSOKIG00005001380) srgap2 (ENSOKIG00005001357) zgc:101564 (ENSOKIG00005001347) odad1 (ENSOKIG00005001341) slc45a1 (ENSOKIG00005001333) MMEL1 (ENSOKIG00005000691) tnfrsf1b (ENSOKIG00005000340) trim62.1 (ENSOKIG00005000312) znf362a (ENSOKIG00005000287) A3GALT2 (ENSOKIG00005000276) EMP3 (ENSOKIG00005000270) Rainbow trout MODERN SPECIES 8 ENSOMYG00000027011 gxylt2 (ENSOMYG00000027027) ppp4r2b (ENSOMYG00000027058) pdzrn3b (ENSOMYG00000027116) ENSOMYG00000066808 ENSOMYG00000027186 ENSOMYG00000027763 ENSOMYG00000030724 cntn4 (ENSOMYG00000038930) ENSOMYG00000042824 ENSOMYG00000057673 ENSOMYG00000042830 ENSOMYG00000042833 ENSOMYG00000042836 lbp/bpi-2 (ENSOMYG00000042849) tcbp2 (ENSOMYG00000074078) ##22 ENSOMYG00000042897 ENSOMYG00000042992 ENSOMYG00000043005 ENSOMYG00000073034 ENSOMYG00000073163 RASSF5 (ENSOMYG00000074417) ENSOMYG00000070975 ENSOMYG00000062604 ENSOMYG00000064648 ikbke (ENSOMYG00000043039) srgap2 (ENSOMYG00000066689) ENSOMYG00000062542 zgc:101564 (ENSOMYG00000043083) ENSOMYG00000043088 ENSOMYG00000069007 Otomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Otophysi ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.g ##22 Characiphysae ANCESTRAL SPECIES 195 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 Characiphysae_b ANCESTRAL SPECIES 203 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000160069 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 Characoidei ANCESTRAL SPECIES 295 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 1904 ENSPNAG00000010669 ##22 crp2 (ENSPNAG00000010681) ##22 Red-bellied piranha MODERN SPECIES 1190 cox6b1 (ENSPNAG00000016824) ENSPNAG00000016872 ENSPNAG00000016894 ENSPNAG00000016919 stub1 (ENSPNAG00000016972) ENSPNAG00000017078 ENSPNAG00000017096 ##22 ENSPNAG00000017137 ##22 Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 1190 ENSPNAG00000017137 ##22 ENSPNAG00000017096 ##22 ENSPNAG00000017078 stub1 (ENSPNAG00000016972) ENSPNAG00000016919 ENSPNAG00000016894 ENSPNAG00000016872 cox6b1 (ENSPNAG00000016824) Red-bellied piranha MODERN SPECIES 2907 ENSPNAG00000026983 ##22 Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 707 ENSAMXG00000042899 metrn (ENSAMXG00000043128) ENSAMXG00000041893 ENSAMXG00000039514 crp2 (ENSAMXG00000029766) ##22 ENSAMXG00000015492 ##22 ENSAMXG00000029309 ##22 stub1 (ENSAMXG00000015549) luc7l (ENSAMXG00000033359) ENSAMXG00000015595 cox6b1 (ENSAMXG00000041109) ENSAMXG00000033071 ENSAMXG00000037951 dcun1d3 (ENSAMXG00000043482) lyrm1 (ENSAMXG00000029595) Mexicana tetra MODERN SPECIES 707 lyrm1 (ENSAMXG00000029595) dcun1d3 (ENSAMXG00000043482) ENSAMXG00000037951 ENSAMXG00000033071 cox6b1 (ENSAMXG00000041109) ENSAMXG00000015595 luc7l (ENSAMXG00000033359) stub1 (ENSAMXG00000015549) ENSAMXG00000029309 ##22 ENSAMXG00000015492 ##22 crp2 (ENSAMXG00000029766) ##22 ENSAMXG00000039514 ENSAMXG00000041893 metrn (ENSAMXG00000043128) ENSAMXG00000042899 Channel catfish MODERN SPECIES prtfdc1 (ENSIPUG00000003488) enkur (ENSIPUG00000003517) THNSL1 (ENSIPUG00000003535) ENSIPUG00000003536 ENSIPUG00000003554 ENSIPUG00000003616 ENSIPUG00000003629 ENSIPUG00000003640 ENSIPUG00000003651 ENSIPUG00000003675 ENSIPUG00000003702 ENSIPUG00000003717 ENSIPUG00000003725 KCNJ12 (ENSIPUG00000003737) ENSIPUG00000003749 ENSIPUG00000003755 ##22 ptx4 (ENSIPUG00000003759) ##22 ENSIPUG00000003766 metrn (ENSIPUG00000003788) ENSIPUG00000003797 IFT140 (ENSIPUG00000003861) #20 Tmem204 (ENSIPUG00000003947) #19 ENSIPUG00000003960 ENSIPUG00000003968 ENSIPUG00000003988 DPP6 (ENSIPUG00000004014) ENSIPUG00000004160 ENSIPUG00000004178 ENSIPUG00000004188 ENSIPUG00000004202 ENSIPUG00000004216 Neopterygii ANCESTRAL SPECIES 210 ENSGT00940000153820.b.b ENSGT00950000182933.B.a.a ENSGT00930000151045.e ENSGT00390000015438 ENSGT00390000012605 ENSGT00940000158312 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00960000190511 ENSGT00390000001390.b ENSGT00390000013678 ENSGT00390000014771.b.a ENSGT00940000154852.a ENSGT00390000002810 ENSGT00940000160286 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 Osteoglossocephalai ANCESTRAL SPECIES 154 ENSGT00940000161283 #15 ENSGT00390000008964 #14 ENSGT01030000234629.E.a.b #12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873 ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b ENSGT00950000182933.B.a.a ENSGT00930000151045.e ENSGT00990000204060 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000160286 ENSGT00390000002810 ENSGT00390000014771.b.a ENSGT00390000015438 ENSGT00940000158312.f ENSGT00390000012605 Osteoglossiformes ANCESTRAL SPECIES 87 ENSGT00940000153496.a.a.p #16 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.b #12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873 ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b ENSGT00950000182933.B.a.a ENSGT00930000151045.e ENSGT00990000204060 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000162489 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000160286 ENSGT00940000154852.a ENSGT00530000066748 ENSGT00390000008957 ENSGT00940000160173 ENSGT00810000125570 ENSGT00940000160651 Asian bonytongue MODERN SPECIES 12 mapk8ip3 (ENSSFOG00015017726) #16 spsb3a (ENSSFOG00015026406) #12 nubp2 (ENSSFOG00015017820) #11 atp6v0ca (ENSSFOG00015025963) TBC1D24 (ENSSFOG00015017859) ENSSFOG00015017874 ntn2 (ENSSFOG00015017974) nog2 (ENSSFOG00015018190) ENSSFOG00015018202 CAPN15 (ENSSFOG00015018233) MSS51 (ENSSFOG00015018291) ENSSFOG00015018324 ENSSFOG00015018333 STUB1 (ENSSFOG00015032771) ENSSFOG00015018358 crp2 (ENSSFOG00015018373) ##22 PRR35 (ENSSFOG00015018389) metrn (ENSSFOG00015024644) ENSSFOG00015018443 ENSSFOG00015018518 ENSSFOG00015029981 tmem204 (ENSSFOG00015026313) #19 telo2 (ENSSFOG00015018557) #21 rab11fip3 (ENSSFOG00015018576) decr2 (ENSSFOG00015018621) nme4 (ENSSFOG00015018637) SBK1 (ENSSFOG00015027212) ENSSFOG00015018660 cluap1 (ENSSFOG00015018673) h1-0 (ENSSFOG00015031419) rhbdl1 (ENSSFOG00015018751) P. kingsleyae MODERN SPECIES 170 ENSPKIG00000008645 mapk8ip3 (ENSPKIG00000008596) #16 EME2 (ENSPKIG00000008539) #13 spsb3a (ENSPKIG00000008502) #12 nubp2 (ENSPKIG00000008473) #11 ATP6V0C (ENSPKIG00000008460) TBC1D24 (ENSPKIG00000008441) ENSPKIG00000008390 ntn2 (ENSPKIG00000008341) nog2 (ENSPKIG00000008324) ENSPKIG00000008143 CAPN15 (ENSPKIG00000008024) MSS51 (ENSPKIG00000007982) ENSPKIG00000007954 STUB1 (ENSPKIG00000007913) crp2 (ENSPKIG00000007863) ##22 ENSPKIG00000007838 metrn (ENSPKIG00000007811) ENSPKIG00000007785 ENSPKIG00000007762 ENSPKIG00000007751 Clupeocephala ANCESTRAL SPECIES 6 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b ENSGT00950000182933.B.a.a ENSGT00930000151045.e ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000159641 ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000171912 Otomorpha ANCESTRAL SPECIES 132 ENSGT00550000074873.nb.a ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198 ENSGT00940000155286.m.a ENSGT01030000234586.A.a.a.a ENSGT00940000154959 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000159641 ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652 #25 ENSGT01100000263504.a.b.a.b.a.b ENSGT01100000263504.a.b.a.b.a.a Otophysi ANCESTRAL SPECIES 112 ENSGT00550000074873.nb.a ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198 ENSGT00940000155286.m.a ENSGT01030000234586.A.a.a.a ENSGT00940000154959 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000159641 ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652 #25 ENSGT01100000263504.a.b.a.b.a.b ENSGT01100000263504.a.b.a.b.a.a ENSGT01100000263504.a.b.a.a Characiphysae ANCESTRAL SPECIES 195 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 Channel catfish MODERN SPECIES enkur (ENSIPUG00000003517) THNSL1 (ENSIPUG00000003535) ENSIPUG00000003536 ENSIPUG00000003554 ENSIPUG00000003616 ENSIPUG00000003629 ENSIPUG00000003640 ENSIPUG00000003651 ENSIPUG00000003675 ENSIPUG00000003702 ENSIPUG00000003717 ENSIPUG00000003725 KCNJ12 (ENSIPUG00000003737) ENSIPUG00000003749 ENSIPUG00000003755 ##22 ptx4 (ENSIPUG00000003759) ##22 ENSIPUG00000003766 metrn (ENSIPUG00000003788) ENSIPUG00000003797 IFT140 (ENSIPUG00000003861) #20 Tmem204 (ENSIPUG00000003947) #19 ENSIPUG00000003960 ENSIPUG00000003968 ENSIPUG00000003988 DPP6 (ENSIPUG00000004014) ENSIPUG00000004160 ENSIPUG00000004178 ENSIPUG00000004188 ENSIPUG00000004202 ENSIPUG00000004216 ENSIPUG00000004226 Characiphysae_b ANCESTRAL SPECIES 203 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000160069 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 Electric eel MODERN SPECIES 66 crp2 (ENSEEEG00000023960) ##22 ENSEEEG00000023961 metrn (ENSEEEG00000023962) ENSEEEG00000023963 ENSEEEG00000023964 IFT140 (ENSEEEG00000023965) #20 tmem204 (ENSEEEG00000023966) #19 ENSEEEG00000023967 stub1 (ENSEEEG00000023968) luc7l (ENSEEEG00000023969) ENSEEEG00000023970 cox6b1 (ENSEEEG00000023973) ENSEEEG00000023976 dcun1d3 (ENSEEEG00000023978) lyrm1 (ENSEEEG00000023979) ENSEEEG00000023981 Characoidei ANCESTRAL SPECIES 295 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.g ##22 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 Red-bellied piranha MODERN SPECIES 1904 ENSPNAG00000010669 ##22 crp2 (ENSPNAG00000010681) ##22 Mexicana tetra MODERN SPECIES 707 lyrm1 (ENSAMXG00000029595) dcun1d3 (ENSAMXG00000043482) ENSAMXG00000037951 ENSAMXG00000033071 cox6b1 (ENSAMXG00000041109) ENSAMXG00000015595 luc7l (ENSAMXG00000033359) stub1 (ENSAMXG00000015549) ENSAMXG00000029309 ##22 ENSAMXG00000015492 ##22 crp2 (ENSAMXG00000029766) ##22 ENSAMXG00000039514 ENSAMXG00000041893 metrn (ENSAMXG00000043128) ENSAMXG00000042899 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 98 ENSGT00940000161121 ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652 #25 ENSGT01100000263504.a.a ENSGT00390000000306 ENSGT00940000156610 ENSGT00940000159396 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 191 ENSGT01090000260033.a.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT00390000015528.c.b #19 ENSGT00940000153417.A #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000013678 ENSGT00390000015528.d #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.c ENSGT00940000153801.a.h ENSGT01000000218705 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g ENSGT00510000049652.a #25 ENSGT00990000214316 Goldfish MODERN SPECIES 1513 ntn2 (ENSCARG00000034362) ENSCARG00000034395 slc6a16b (ENSCARG00000034423) SLC17A7 (ENSCARG00000034516) ENSCARG00000034619 LRRC4B (ENSCARG00000034638) mybpc2b (ENSCARG00000034794) ENSCARG00000040432 ENSCARG00000040441 ##22 ENSCARG00000040501 ENSCARG00000040970 ENSCARG00000040977 ENSCARG00000041013 ##22 crp2 (ENSCARG00000041046) ##22 ENSCARG00000041056 ##22 ENSCARG00000041063 ##22 metrn (ENSCARG00000041084) IFT140 (ENSCARG00000041138) #20 gnptg (ENSCARG00000041391) #27 tmem204 (ENSCARG00000041909) #19 rab11fip3 (ENSCARG00000041930) decr2 (ENSCARG00000041957) ENSCARG00000042123 #25 ENSCARG00000042145 wdr24 (ENSCARG00000042187) zgc:112496 (ENSCARG00000042296) rhbdl1 (ENSCARG00000042322) h1-0 (ENSCARG00000042361) NLRC3 (ENSCARG00000042899) ENSCARG00000043086 SBK1 (ENSCARG00000043179) Cyprininae_a ANCESTRAL SPECIES 100 ENSGT01090000260033.a.a.a.a.b.a.a.a.a.a.a.b.b.b.b.b ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT01060000253686 ENSGT00940000153417.A.c #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g ENSGT00510000049652.a #25 ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00490000044657 ENSGT00940000160651.d ENSGT00810000125570.f ENSGT00940000158109.c Golden-line barbel MODERN SPECIES 574 MSS51 (ENSSGRG00000022823) CAPN15 (ENSSGRG00000022827) ENSSGRG00000022902 nog2 (ENSSGRG00000022904) ntn2 (ENSSGRG00000022905) ENSSGRG00000022906 slc6a16b (ENSSGRG00000022911) SLC17A7 (ENSSGRG00000022922) ENSSGRG00000023267 ENSSGRG00000023270 zgc:91999 (ENSSGRG00000023273) LRRC4B (ENSSGRG00000023277) ENSSGRG00000023278 ENSSGRG00000023285 ##22 crp2 (ENSSGRG00000023286) ##22 ENSSGRG00000023287 ##22 ENSSGRG00000023289 metrn (ENSSGRG00000023290) ENSSGRG00000023291 IFT140 (ENSSGRG00000023293) #20 tmem204 (ENSSGRG00000023325) #19 rab11fip3 (ENSSGRG00000023327) decr2 (ENSSGRG00000023328) ENSSGRG00000023329 zgc:112185 (ENSSGRG00000023330) ENSSGRG00000023331 wdr24 (ENSSGRG00000023334) rhbdl1 (ENSSGRG00000023336) h1-0 (ENSSGRG00000023337) rhot2 (ENSSGRG00000023356) ENSSGRG00000024716 Common carp reference MODERN SPECIES 14 ENSCCRG00000005096 slc6a16b (ENSCCRG00000005089) ENSCCRG00000065594 zgc:154125 (ENSCCRG00000052480) ENSCCRG00000079160 ENSCCRG00000048345 ENSCCRG00000048343 mybpc2b (ENSCCRG00000057582) ENSCCRG00000081491 ENSCCRG00000065638 ENSCCRG00000073761 ENSCCRG00000068938 ENSCCRG00000057241 ENSCCRG00000055852 ENSCCRG00000075848 ENSCCRG00000076371 ##22 ENSCCRG00000063041 ENSCCRG00000052313 ENSCCRG00000042410 ##22 metrn (ENSCCRG00000052315) ENSCCRG00000052318 ENSCCRG00000052328 #20 tmem204 (ENSCCRG00000052319) #19 telo2 (ENSCCRG00000052336) #21 rab11fip3 (ENSCCRG00000077046) decr2 (ENSCCRG00000056836) ENSCCRG00000054657 ENSCCRG00000003845 #25 anks3 (ENSCCRG00000019038) wdr24 (ENSCCRG00000019053) ENSCCRG00000082551 Cyprininae ANCESTRAL SPECIES 297 ENSGT00390000006009.a.a.b.b.d ENSGT00940000153882.a.b.b.a.e ENSGT00940000158125.a.c ENSGT00940000163157.a.e.a ENSGT00940000159110.a.e.c ENSGT00940000153561.b.a.b.a.b.w.a ENSGT00950000182973.b.b.d.b ENSGT00940000160261.h.c ENSGT00940000160092.A.g ENSGT00930000151196.a.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.b ENSGT01030000234589.h.c.b.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.a ENSGT00940000161121.c ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.b ##22 ENSGT00530000063870.b.e ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 ENSGT00390000001390.b.f Goldfish MODERN SPECIES 16 ENSCARG00000021672 ENSCARG00000021688 ENSCARG00000021707 ENSCARG00000021716 ENSCARG00000021746 ENSCARG00000021764 ENSCARG00000021773 ENSCARG00000021779 ENSCARG00000021789 ENSCARG00000021796 ENSCARG00000021804 ENSCARG00000021810 ENSCARG00000021823 ##22 ENSCARG00000021831 ##22 ENSCARG00000021842 ##22 ENSCARG00000021847 ##22 ENSCARG00000021853 ENSCARG00000021858 ##22 metrn (ENSCARG00000021871) ENSCARG00000021884 tmem204 (ENSCARG00000021902) #19 telo2 (ENSCARG00000021924) #21 rab11fip3 (ENSCARG00000021975) decr2 (ENSCARG00000021980) ENSCARG00000022007 ENSCARG00000022018 ENSCARG00000022026 #25 ENSCARG00000022032 zgc:112185 (ENSCARG00000022041) anks3 (ENSCARG00000022051) wdr24 (ENSCARG00000022065) Cyprininae_a ANCESTRAL SPECIES 140 ENSGT00390000013678 ENSGT00390000015528.c.a.b #19 ENSGT01100000263515.a.b.a.b.a.h.a.b ##22 ENSGT00530000063870.b.e ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 ENSGT00390000001390.b.f ENSGT00940000153417.A.d #20 ENSGT00390000015528.c.b #19 ENSGT00440000033742.a.a.c ENSGT00940000153801.a.h ENSGT01000000218705 ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652.b #25 ENSGT00940000156610.a ENSGT00940000159396.g.a ENSGT00530000064671.e.a ENSGT00940000160651.c Common carp reference MODERN SPECIES 40 ENSCCRG00000010068 ENSCCRG00000058033 ENSCCRG00000078341 ENSCCRG00000066250 ENSCCRG00000013539 ENSCCRG00000036701 ENSCCRG00000082530 ENSCCRG00000039713 ENSCCRG00000063391 ENSCCRG00000036695 ENSCCRG00000073559 ENSCCRG00000075547 ENSCCRG00000069944 ENSCCRG00000036703 ENSCCRG00000032779 ##22 ENSCCRG00000052314 ##22 ENSCCRG00000059828 ##22 ENSCCRG00000032785 metrn (ENSCCRG00000032793) ENSCCRG00000071644 tmem204 (ENSCCRG00000067137) #19 ENSCCRG00000057882 ENSCCRG00000003922 ENSCCRG00000003903 ENSCCRG00000059888 anks3 (ENSCCRG00000073395) wdr24 (ENSCCRG00000003864) zgc:112496 (ENSCCRG00000003860) rhbdl1 (ENSCCRG00000077333) h1-0 (ENSCCRG00000057432) rhot2 (ENSCCRG00000036930) Golden-line barbel MODERN SPECIES 18 ENSSGRG00000007351 ENSSGRG00000007353 ENSSGRG00000007356 ENSSGRG00000007359 ENSSGRG00000007360 ENSSGRG00000007362 ENSSGRG00000007363 ENSSGRG00000007372 ENSSGRG00000007378 ##22 ENSSGRG00000007380 ##22 ENSSGRG00000007382 ##22 ENSSGRG00000007386 ENSSGRG00000007387 ##22 metrn (ENSSGRG00000007390) IFT140 (ENSSGRG00000007393) #20 tmem204 (ENSSGRG00000007395) #19 rab11fip3 (ENSSGRG00000007409) decr2 (ENSSGRG00000007411) ENSSGRG00000007412 ENSSGRG00000007414 ENSSGRG00000007415 #25 ENSSGRG00000007419 zgc:112185 (ENSSGRG00000007483) anks3 (ENSSGRG00000007485) wdr24 (ENSSGRG00000007486) rhbdl1 (ENSSGRG00000007489) Zebrafish MODERN SPECIES 16 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 h3f3d (ENSDARG00000045248) zgc:112185 (ENSDARG00000038556) anks3 (ENSDARG00000038557) wdr24 (ENSDARG00000025507) zgc:112496 (ENSDARG00000004274) Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 Cyprininae ANCESTRAL SPECIES 191 ENSGT01090000260033.a.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT00390000015528.c.b #19 ENSGT00940000153417.A #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000013678 ENSGT00390000015528.d #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.c ENSGT00940000153801.a.h ENSGT01000000218705 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 1513 nog2 (ENSCARG00000034345) ntn2 (ENSCARG00000034362) ENSCARG00000034395 slc6a16b (ENSCARG00000034423) SLC17A7 (ENSCARG00000034516) ENSCARG00000034619 LRRC4B (ENSCARG00000034638) mybpc2b (ENSCARG00000034794) ENSCARG00000040432 ENSCARG00000040441 ##22 ENSCARG00000040501 ENSCARG00000040970 ENSCARG00000040977 ENSCARG00000041013 ##22 crp2 (ENSCARG00000041046) ##22 ENSCARG00000041056 ##22 ENSCARG00000041063 ##22 metrn (ENSCARG00000041084) IFT140 (ENSCARG00000041138) #20 gnptg (ENSCARG00000041391) #27 tmem204 (ENSCARG00000041909) #19 rab11fip3 (ENSCARG00000041930) decr2 (ENSCARG00000041957) ENSCARG00000042123 #25 ENSCARG00000042145 wdr24 (ENSCARG00000042187) zgc:112496 (ENSCARG00000042296) rhbdl1 (ENSCARG00000042322) h1-0 (ENSCARG00000042361) NLRC3 (ENSCARG00000042899) ENSCARG00000043086 Goldfish MODERN SPECIES 1513 CAPN15 (ENSCARG00000033313) ENSCARG00000034297 nog2 (ENSCARG00000034345) ntn2 (ENSCARG00000034362) ENSCARG00000034395 slc6a16b (ENSCARG00000034423) SLC17A7 (ENSCARG00000034516) ENSCARG00000034619 LRRC4B (ENSCARG00000034638) mybpc2b (ENSCARG00000034794) ENSCARG00000040432 ENSCARG00000040441 ##22 ENSCARG00000040501 ENSCARG00000040970 ENSCARG00000040977 ENSCARG00000041013 ##22 crp2 (ENSCARG00000041046) ##22 ENSCARG00000041056 ##22 ENSCARG00000041063 ##22 metrn (ENSCARG00000041084) IFT140 (ENSCARG00000041138) #20 gnptg (ENSCARG00000041391) #27 tmem204 (ENSCARG00000041909) #19 rab11fip3 (ENSCARG00000041930) decr2 (ENSCARG00000041957) ENSCARG00000042123 #25 ENSCARG00000042145 wdr24 (ENSCARG00000042187) zgc:112496 (ENSCARG00000042296) rhbdl1 (ENSCARG00000042322) h1-0 (ENSCARG00000042361) Goldfish MODERN SPECIES 16 ENSCARG00000021652 ENSCARG00000021672 ENSCARG00000021688 ENSCARG00000021707 ENSCARG00000021716 ENSCARG00000021746 ENSCARG00000021764 ENSCARG00000021773 ENSCARG00000021779 ENSCARG00000021789 ENSCARG00000021796 ENSCARG00000021804 ENSCARG00000021810 ENSCARG00000021823 ##22 ENSCARG00000021831 ##22 ENSCARG00000021842 ##22 ENSCARG00000021847 ##22 ENSCARG00000021853 ENSCARG00000021858 ##22 metrn (ENSCARG00000021871) ENSCARG00000021884 tmem204 (ENSCARG00000021902) #19 telo2 (ENSCARG00000021924) #21 rab11fip3 (ENSCARG00000021975) decr2 (ENSCARG00000021980) ENSCARG00000022007 ENSCARG00000022018 ENSCARG00000022026 #25 ENSCARG00000022032 zgc:112185 (ENSCARG00000022041) anks3 (ENSCARG00000022051) Cyprininae_a ANCESTRAL SPECIES 100 ENSGT01090000260033.a.a.a.a.b.a.a.a.a.a.a.b.b.b.b.b ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT01060000253686 ENSGT00940000153417.A.c #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g ENSGT00510000049652.a #25 ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00490000044657 ENSGT00940000160651.d Golden-line barbel MODERN SPECIES 574 TBC1D24 (ENSSGRG00000022808) ENSSGRG00000022822 MSS51 (ENSSGRG00000022823) CAPN15 (ENSSGRG00000022827) ENSSGRG00000022902 nog2 (ENSSGRG00000022904) ntn2 (ENSSGRG00000022905) ENSSGRG00000022906 slc6a16b (ENSSGRG00000022911) SLC17A7 (ENSSGRG00000022922) ENSSGRG00000023267 ENSSGRG00000023270 zgc:91999 (ENSSGRG00000023273) LRRC4B (ENSSGRG00000023277) ENSSGRG00000023278 ENSSGRG00000023285 ##22 crp2 (ENSSGRG00000023286) ##22 ENSSGRG00000023287 ##22 ENSSGRG00000023289 metrn (ENSSGRG00000023290) ENSSGRG00000023291 IFT140 (ENSSGRG00000023293) #20 tmem204 (ENSSGRG00000023325) #19 rab11fip3 (ENSSGRG00000023327) decr2 (ENSSGRG00000023328) ENSSGRG00000023329 zgc:112185 (ENSSGRG00000023330) ENSSGRG00000023331 wdr24 (ENSSGRG00000023334) rhbdl1 (ENSSGRG00000023336) h1-0 (ENSSGRG00000023337) Common carp reference MODERN SPECIES 14 rhot2 (ENSCCRG00000032810) h1-0 (ENSCCRG00000067178) rhbdl1 (ENSCCRG00000056535) ENSCCRG00000082551 wdr24 (ENSCCRG00000019053) anks3 (ENSCCRG00000019038) ENSCCRG00000003845 #25 ENSCCRG00000054657 decr2 (ENSCCRG00000056836) rab11fip3 (ENSCCRG00000077046) telo2 (ENSCCRG00000052336) #21 tmem204 (ENSCCRG00000052319) #19 ENSCCRG00000052328 #20 ENSCCRG00000052318 metrn (ENSCCRG00000052315) ENSCCRG00000042410 ##22 ENSCCRG00000052313 ENSCCRG00000063041 ENSCCRG00000076371 ##22 ENSCCRG00000075848 ENSCCRG00000055852 ENSCCRG00000057241 ENSCCRG00000068938 ENSCCRG00000073761 ENSCCRG00000065638 ENSCCRG00000081491 mybpc2b (ENSCCRG00000057582) ENSCCRG00000048343 ENSCCRG00000048345 ENSCCRG00000079160 zgc:154125 (ENSCCRG00000052480) Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 98 ENSGT00940000161121 ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652 #25 ENSGT01100000263504.a.a ENSGT00390000000306 ENSGT00940000156610 Cyprininae ANCESTRAL SPECIES 191 ENSGT01090000260033.a.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT00390000015528.c.b #19 ENSGT00940000153417.A #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000013678 ENSGT00390000015528.d #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.c ENSGT00940000153801.a.h ENSGT01000000218705 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g ENSGT00510000049652.a #25 Cyprininae_a ANCESTRAL SPECIES 100 ENSGT01090000260033.a.a.a.a.b.a.a.a.a.a.a.b.b.b.b.b ENSGT01030000234589.h.c.b.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.a ENSGT01090000260033.a.a.a.a.b.a.a.b.b.a.b.b ENSGT01100000263515.a.b.a.b.a.h.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.a ##22 ENSGT00530000063870.b.f ENSGT00390000001390.b.e ENSGT01060000253686 ENSGT00940000153417.A.c #20 ENSGT00390000015528.c.a.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.d ENSGT00940000153801.a.g ENSGT00510000049652.a #25 ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00490000044657 ENSGT00940000160651.d ENSGT00810000125570.f Golden-line barbel MODERN SPECIES 574 ENSSGRG00000022822 MSS51 (ENSSGRG00000022823) CAPN15 (ENSSGRG00000022827) ENSSGRG00000022902 nog2 (ENSSGRG00000022904) ntn2 (ENSSGRG00000022905) ENSSGRG00000022906 slc6a16b (ENSSGRG00000022911) SLC17A7 (ENSSGRG00000022922) ENSSGRG00000023267 ENSSGRG00000023270 zgc:91999 (ENSSGRG00000023273) LRRC4B (ENSSGRG00000023277) ENSSGRG00000023278 ENSSGRG00000023285 ##22 crp2 (ENSSGRG00000023286) ##22 ENSSGRG00000023287 ##22 ENSSGRG00000023289 metrn (ENSSGRG00000023290) ENSSGRG00000023291 IFT140 (ENSSGRG00000023293) #20 tmem204 (ENSSGRG00000023325) #19 rab11fip3 (ENSSGRG00000023327) decr2 (ENSSGRG00000023328) ENSSGRG00000023329 zgc:112185 (ENSSGRG00000023330) ENSSGRG00000023331 wdr24 (ENSSGRG00000023334) rhbdl1 (ENSSGRG00000023336) h1-0 (ENSSGRG00000023337) rhot2 (ENSSGRG00000023356) Goldfish MODERN SPECIES 1513 ENSCARG00000034297 nog2 (ENSCARG00000034345) ntn2 (ENSCARG00000034362) ENSCARG00000034395 slc6a16b (ENSCARG00000034423) SLC17A7 (ENSCARG00000034516) ENSCARG00000034619 LRRC4B (ENSCARG00000034638) mybpc2b (ENSCARG00000034794) ENSCARG00000040432 ENSCARG00000040441 ##22 ENSCARG00000040501 ENSCARG00000040970 ENSCARG00000040977 ENSCARG00000041013 ##22 crp2 (ENSCARG00000041046) ##22 ENSCARG00000041056 ##22 ENSCARG00000041063 ##22 metrn (ENSCARG00000041084) IFT140 (ENSCARG00000041138) #20 gnptg (ENSCARG00000041391) #27 tmem204 (ENSCARG00000041909) #19 rab11fip3 (ENSCARG00000041930) decr2 (ENSCARG00000041957) ENSCARG00000042123 #25 ENSCARG00000042145 wdr24 (ENSCARG00000042187) zgc:112496 (ENSCARG00000042296) rhbdl1 (ENSCARG00000042322) h1-0 (ENSCARG00000042361) NLRC3 (ENSCARG00000042899) Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 16 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 h3f3d (ENSDARG00000045248) zgc:112185 (ENSDARG00000038556) anks3 (ENSDARG00000038557) wdr24 (ENSDARG00000025507) Zebrafish MODERN SPECIES 16 zgc:91999 (ENSDARG00000105001) ENSDARG00000113944 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 h3f3d (ENSDARG00000045248) zgc:112185 (ENSDARG00000038556) Zebrafish MODERN SPECIES 16 ENSDARG00000113944 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 h3f3d (ENSDARG00000045248) zgc:112185 (ENSDARG00000038556) anks3 (ENSDARG00000038557) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 16 ENSDARG00000097702 LRRC4B (ENSDARG00000014792) mybpc2b (ENSDARG00000021265) zgc:91999 (ENSDARG00000105001) ENSDARG00000113944 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 Zebrafish MODERN SPECIES 16 LRRC4B (ENSDARG00000014792) mybpc2b (ENSDARG00000021265) zgc:91999 (ENSDARG00000105001) ENSDARG00000113944 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 98 ENSGT00940000161121 ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00390000017838 ENSGT00940000154307.A ENSGT00510000049652 #25 ENSGT01100000263504.a.a ENSGT00390000000306 Cyprininae ANCESTRAL SPECIES 297 ENSGT00940000163984.B.c ENSGT00390000006009.a.a.b.b.d ENSGT00940000153882.a.b.b.a.e ENSGT00940000158125.a.c ENSGT00940000163157.a.e.a ENSGT00940000159110.a.e.c ENSGT00940000153561.b.a.b.a.b.w.a ENSGT00950000182973.b.b.d.b ENSGT00940000160261.h.c ENSGT00940000160092.A.g ENSGT00930000151196.a.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.b ENSGT01030000234589.h.c.b.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.a ENSGT00940000161121.c ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT01100000263515.a.b.a.b.a.h.a.b ##22 ENSGT00530000063870.b.e ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 ENSGT00390000001390.b.f Goldfish MODERN SPECIES 1513 ENSCARG00000042145 ENSCARG00000042123 #25 decr2 (ENSCARG00000041957) rab11fip3 (ENSCARG00000041930) tmem204 (ENSCARG00000041909) #19 gnptg (ENSCARG00000041391) #27 IFT140 (ENSCARG00000041138) #20 metrn (ENSCARG00000041084) ENSCARG00000041063 ##22 ENSCARG00000041056 ##22 crp2 (ENSCARG00000041046) ##22 ENSCARG00000041013 ##22 ENSCARG00000040977 ENSCARG00000040970 ENSCARG00000040501 ENSCARG00000040441 ##22 ENSCARG00000040432 mybpc2b (ENSCARG00000034794) LRRC4B (ENSCARG00000034638) ENSCARG00000034619 SLC17A7 (ENSCARG00000034516) slc6a16b (ENSCARG00000034423) ENSCARG00000034395 ntn2 (ENSCARG00000034362) nog2 (ENSCARG00000034345) ENSCARG00000034297 CAPN15 (ENSCARG00000033313) ENSCARG00000033250 TBC1D24 (ENSCARG00000033173) atp6v0cb (ENSCARG00000033131) nubp2 (ENSCARG00000033001) #11 Cyprininae_a ANCESTRAL SPECIES 733 ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.b ENSGT01030000234589.h.c.b.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.a.b ENSGT00940000161121.c ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 Golden-line barbel MODERN SPECIES 18 ENSSGRG00000007351 ENSSGRG00000007353 ENSSGRG00000007356 ENSSGRG00000007359 ENSSGRG00000007360 ENSSGRG00000007362 ENSSGRG00000007363 ENSSGRG00000007372 ENSSGRG00000007378 ##22 ENSSGRG00000007380 ##22 ENSSGRG00000007382 ##22 ENSSGRG00000007386 ENSSGRG00000007387 ##22 metrn (ENSSGRG00000007390) IFT140 (ENSSGRG00000007393) #20 tmem204 (ENSSGRG00000007395) #19 rab11fip3 (ENSSGRG00000007409) decr2 (ENSSGRG00000007411) ENSSGRG00000007412 ENSSGRG00000007414 ENSSGRG00000007415 #25 ENSSGRG00000007419 zgc:112185 (ENSSGRG00000007483) anks3 (ENSSGRG00000007485) wdr24 (ENSSGRG00000007486) Common carp reference MODERN SPECIES 40 WDR90 (ENSCCRG00000038797) rhot2 (ENSCCRG00000036930) h1-0 (ENSCCRG00000057432) rhbdl1 (ENSCCRG00000077333) zgc:112496 (ENSCCRG00000003860) wdr24 (ENSCCRG00000003864) anks3 (ENSCCRG00000073395) ENSCCRG00000059888 ENSCCRG00000003903 ENSCCRG00000003922 ENSCCRG00000057882 tmem204 (ENSCCRG00000067137) #19 ENSCCRG00000071644 metrn (ENSCCRG00000032793) ENSCCRG00000032785 ENSCCRG00000059828 ##22 ENSCCRG00000052314 ##22 ENSCCRG00000032779 ##22 ENSCCRG00000036703 ENSCCRG00000069944 ENSCCRG00000075547 ENSCCRG00000073559 ENSCCRG00000036695 ENSCCRG00000063391 ENSCCRG00000039713 ENSCCRG00000082530 ENSCCRG00000036701 ENSCCRG00000013539 ENSCCRG00000066250 ENSCCRG00000078341 ENSCCRG00000058033 Zebrafish MODERN SPECIES 16 mybpc2b (ENSDARG00000021265) zgc:91999 (ENSDARG00000105001) ENSDARG00000113944 ENSDARG00000117030 ENSDARG00000109863 ENSDARG00000113786 ENSDARG00000110046 ENSDARG00000079987 ENSDARG00000093855 ENSDARG00000078763 ENSDARG00000111761 ENSDARG00000093272 ENSDARG00000071460 crp7 (ENSDARG00000071456) ##22 crp6 (ENSDARG00000071457) ##22 ENSDARG00000095730 ##22 ENSDARG00000056498 ##22 crp3 (ENSDARG00000042613) ##22 crp2 (ENSDARG00000056462) ##22 ENSDARG00000071454 ##22 ENSDARG00000087663 metrn (ENSDARG00000030367) ENSDARG00000030095 tmem204 (ENSDARG00000045273) #19 IFT140 (ENSDARG00000031886) #20 telo2 (ENSDARG00000000830) #21 rab11fip3 (ENSDARG00000016490) decr2 (ENSDARG00000045257) ENSDARG00000045254 ENSDARG00000100025 #25 h3f3d (ENSDARG00000045248) Cyprinoidei ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 Cyprininae ANCESTRAL SPECIES 297 ENSGT00390000001390.b.f ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 ENSGT00530000063870.b.e ENSGT01100000263515.a.b.a.b.a.h.a.b ##22 ENSGT01100000263515.a.b.a.b.a.h.b.b.b.a ##22 ENSGT00940000161121.c ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.a ENSGT01030000234589.h.c.b.a.b ENSGT01090000260033.a.a.a.a.b.a.a.b.b.b.a.b ENSGT00930000151196.a.a.b ENSGT00940000160092.A.g ENSGT00940000160261.h.c ENSGT00950000182973.b.b.d.b ENSGT00940000153561.b.a.b.a.b.w.a ENSGT00940000159110.a.e.c ENSGT00940000163157.a.e.a ENSGT00940000158125.a.c Cyprininae_a ANCESTRAL SPECIES 140 ENSGT00940000158109.d ENSGT00810000125570.e ENSGT00940000160651.c ENSGT00530000064671.e.a ENSGT00940000159396.g.a ENSGT00940000156610.a ENSGT00510000049652.b #25 ENSGT00940000154307.A ENSGT00390000017838 ENSGT01000000218705 ENSGT00940000153801.a.h ENSGT00440000033742.a.a.c ENSGT00390000015528.c.b #19 ENSGT00940000153417.A.d #20 ENSGT00390000001390.b.f ENSGT01100000263515.a.b.a.b.a.h.b.b.b.b ##22 ENSGT00530000063870.b.e ENSGT01100000263515.a.b.a.b.a.h.a.b ##22 ENSGT00390000015528.c.a.b #19 ENSGT00390000013678 Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 18 ENSSGRG00000007351 ENSSGRG00000007353 ENSSGRG00000007356 ENSSGRG00000007359 ENSSGRG00000007360 ENSSGRG00000007362 ENSSGRG00000007363 ENSSGRG00000007372 ENSSGRG00000007378 ##22 ENSSGRG00000007380 ##22 ENSSGRG00000007382 ##22 ENSSGRG00000007386 ENSSGRG00000007387 ##22 metrn (ENSSGRG00000007390) IFT140 (ENSSGRG00000007393) #20 tmem204 (ENSSGRG00000007395) #19 rab11fip3 (ENSSGRG00000007409) decr2 (ENSSGRG00000007411) ENSSGRG00000007412 ENSSGRG00000007414 ENSSGRG00000007415 #25 ENSSGRG00000007419 zgc:112185 (ENSSGRG00000007483) anks3 (ENSSGRG00000007485) Golden-line barbel MODERN SPECIES 5240 ENSSGRG00000004446 ##22 Golden-line barbel MODERN SPECIES 18 rhot2 (ENSSGRG00000007494) h1-0 (ENSSGRG00000007491) rhbdl1 (ENSSGRG00000007489) wdr24 (ENSSGRG00000007486) anks3 (ENSSGRG00000007485) zgc:112185 (ENSSGRG00000007483) ENSSGRG00000007419 ENSSGRG00000007415 #25 ENSSGRG00000007414 ENSSGRG00000007412 decr2 (ENSSGRG00000007411) rab11fip3 (ENSSGRG00000007409) tmem204 (ENSSGRG00000007395) #19 IFT140 (ENSSGRG00000007393) #20 metrn (ENSSGRG00000007390) ENSSGRG00000007387 ##22 ENSSGRG00000007386 ENSSGRG00000007382 ##22 ENSSGRG00000007380 ##22 ENSSGRG00000007378 ##22 ENSSGRG00000007372 ENSSGRG00000007363 ENSSGRG00000007362 ENSSGRG00000007360 ENSSGRG00000007359 ENSSGRG00000007356 ENSSGRG00000007353 ENSSGRG00000007351 Common carp reference MODERN SPECIES 40 ENSCCRG00000020863 ENSCCRG00000010068 ENSCCRG00000058033 ENSCCRG00000078341 ENSCCRG00000066250 ENSCCRG00000013539 ENSCCRG00000036701 ENSCCRG00000082530 ENSCCRG00000039713 ENSCCRG00000063391 ENSCCRG00000036695 ENSCCRG00000073559 ENSCCRG00000075547 ENSCCRG00000069944 ENSCCRG00000036703 ENSCCRG00000032779 ##22 ENSCCRG00000052314 ##22 ENSCCRG00000059828 ##22 ENSCCRG00000032785 metrn (ENSCCRG00000032793) ENSCCRG00000071644 tmem204 (ENSCCRG00000067137) #19 ENSCCRG00000057882 ENSCCRG00000003922 ENSCCRG00000003903 ENSCCRG00000059888 anks3 (ENSCCRG00000073395) wdr24 (ENSCCRG00000003864) zgc:112496 (ENSCCRG00000003860) rhbdl1 (ENSCCRG00000077333) h1-0 (ENSCCRG00000057432) Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 16 ENSCARG00000021634 ENSCARG00000021642 ENSCARG00000021652 ENSCARG00000021672 ENSCARG00000021688 ENSCARG00000021707 ENSCARG00000021716 ENSCARG00000021746 ENSCARG00000021764 ENSCARG00000021773 ENSCARG00000021779 ENSCARG00000021789 ENSCARG00000021796 ENSCARG00000021804 ENSCARG00000021810 ENSCARG00000021823 ##22 ENSCARG00000021831 ##22 ENSCARG00000021842 ##22 ENSCARG00000021847 ##22 ENSCARG00000021853 ENSCARG00000021858 ##22 metrn (ENSCARG00000021871) ENSCARG00000021884 tmem204 (ENSCARG00000021902) #19 telo2 (ENSCARG00000021924) #21 rab11fip3 (ENSCARG00000021975) decr2 (ENSCARG00000021980) ENSCARG00000022007 ENSCARG00000022018 ENSCARG00000022026 #25 ENSCARG00000022032 Goldfish MODERN SPECIES 16 ENSCARG00000021642 ENSCARG00000021652 ENSCARG00000021672 ENSCARG00000021688 ENSCARG00000021707 ENSCARG00000021716 ENSCARG00000021746 ENSCARG00000021764 ENSCARG00000021773 ENSCARG00000021779 ENSCARG00000021789 ENSCARG00000021796 ENSCARG00000021804 ENSCARG00000021810 ENSCARG00000021823 ##22 ENSCARG00000021831 ##22 ENSCARG00000021842 ##22 ENSCARG00000021847 ##22 ENSCARG00000021853 ENSCARG00000021858 ##22 metrn (ENSCARG00000021871) ENSCARG00000021884 tmem204 (ENSCARG00000021902) #19 telo2 (ENSCARG00000021924) #21 rab11fip3 (ENSCARG00000021975) decr2 (ENSCARG00000021980) ENSCARG00000022007 ENSCARG00000022018 ENSCARG00000022026 #25 ENSCARG00000022032 zgc:112185 (ENSCARG00000022041) Goldfish MODERN SPECIES 16 rhbdl1 (ENSCARG00000022105) zgc:112496 (ENSCARG00000022098) wdr24 (ENSCARG00000022065) anks3 (ENSCARG00000022051) zgc:112185 (ENSCARG00000022041) ENSCARG00000022032 ENSCARG00000022026 #25 ENSCARG00000022018 ENSCARG00000022007 decr2 (ENSCARG00000021980) rab11fip3 (ENSCARG00000021975) telo2 (ENSCARG00000021924) #21 tmem204 (ENSCARG00000021902) #19 ENSCARG00000021884 metrn (ENSCARG00000021871) ENSCARG00000021858 ##22 ENSCARG00000021853 ENSCARG00000021847 ##22 ENSCARG00000021842 ##22 ENSCARG00000021831 ##22 ENSCARG00000021823 ##22 ENSCARG00000021810 ENSCARG00000021804 ENSCARG00000021796 ENSCARG00000021789 ENSCARG00000021779 ENSCARG00000021773 ENSCARG00000021764 ENSCARG00000021746 ENSCARG00000021716 ENSCARG00000021707 Clupeiformes ANCESTRAL SPECIES 141 ENSGT00390000013415.a.a.d ENSGT00940000153713.A ENSGT01030000234527.A.a.b.a.b ENSGT00970000193390.c.b.b.b.b.b ENSGT00940000155021 ENSGT01030000234635.a.a.a.b ENSGT01030000234586.A.a.a.a ENSGT00940000154959 ENSGT00390000006695 ENSGT00940000154944 ENSGT00390000004566 ENSGT00940000164148.a.b ENSGT00530000063694.a ENSGT00950000183213.a.a.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a Atlantic herring MODERN SPECIES 15 ENSCHAG00000010275 cyp4f3 (ENSCHAG00000009659) SYDE1 (ENSCHAG00000009650) SYDE1 (ENSCHAG00000009642) ENSCHAG00000009640 ENSCHAG00000009600 ENSCHAG00000009570 ENSCHAG00000009523 lyrm1 (ENSCHAG00000009470) dcun1d3 (ENSCHAG00000009465) KATNIP (ENSCHAG00000009451) cox6b1 (ENSCHAG00000009430) ENSCHAG00000009385 luc7l (ENSCHAG00000009359) stub1 (ENSCHAG00000009336) crp2 (ENSCHAG00000009304) ##22 PRR35 (ENSCHAG00000009285) metrn (ENSCHAG00000009278) ENSCHAG00000009268 ENSCHAG00000009265 tmem204 (ENSCHAG00000009260) #19 IFT140 (ENSCHAG00000009061) #20 telo2 (ENSCHAG00000008719) #21 rab11fip3 (ENSCHAG00000008586) decr2 (ENSCHAG00000008472) ENSCHAG00000008381 ENSCHAG00000008337 ENSCHAG00000008168 MPRIP (ENSCHAG00000007532) ENSCHAG00000007416 ENSCHAG00000007385 #13 Denticle herring MODERN SPECIES 11 ENSDCDG00000000389 oga (ENSDCDG00000000471) npm3 (ENSDCDG00000000587) trim8a (ENSDCDG00000000590) sufu (ENSDCDG00000000603) ENSDCDG00000000626 lzts2a (ENSDCDG00000000637) pdzd7a (ENSDCDG00000000681) ENSDCDG00000000733 sfxn3 (ENSDCDG00000000735) glo1 (ENSDCDG00000000742) cox6b1 (ENSDCDG00000000745) ENSDCDG00000000751 luc7l (ENSDCDG00000000759) stub1 (ENSDCDG00000000769) crp2 (ENSDCDG00000000773) ##22 ENSDCDG00000000779 ENSDCDG00000000783 adka (ENSDCDG00000000803) ap3m1 (ENSDCDG00000000951) ENSDCDG00000000959 kcnc3b (ENSDCDG00000000965) cog7 (ENSDCDG00000000977) ENSDCDG00000000988 ##30 ENSDCDG00000001000 irf3 (ENSDCDG00000001005) ENSDCDG00000001013 ENSDCDG00000001030 scn4aa (ENSDCDG00000001095) ENSDCDG00000001252 ENSDCDG00000001256 Euteleosteomorpha ANCESTRAL SPECIES 62 ENSGT00940000158816.d ENSGT00940000158312.f ENSGT00390000012605 ENSGT00390000006009.a.a.b ENSGT00940000153882.a.b.b.a ENSGT00940000153470.a.b.a ENSGT00410000025739.c.a ENSGT00550000074873.ob.a.b.b ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198 ENSGT00940000155286.m.a ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000159641 ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000171912 Acanthomorphata ANCESTRAL SPECIES 23 ENSGT00940000157969 ENSGT00390000008957 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Tiger tail seahorse MODERN SPECIES 360 NFE2L1 (ENSHCOG00000003983) cdk5rap3 (ENSHCOG00000004014) prr15lb (ENSHCOG00000004032) ENSHCOG00000004044 SBK1 (ENSHCOG00000004060) RDH13 (ENSHCOG00000004067) decr2 (ENSHCOG00000004078) rab11fip3 (ENSHCOG00000004093) telo2 (ENSHCOG00000004377) #21 ENSHCOG00000004427 #20 tmem204 (ENSHCOG00000004436) #19 IFT140 (ENSHCOG00000004459) #20 metrn (ENSHCOG00000004471) ENSHCOG00000004483 stub1 (ENSHCOG00000004497) crp2 (ENSHCOG00000004509) ##22 PRR35 (ENSHCOG00000004527) dpysl4 (ENSHCOG00000004557) ENSHCOG00000004583 ENSHCOG00000004600 SYDE1 (ENSHCOG00000004666) ENSHCOG00000004688 ENSHCOG00000004746 ENSHCOG00000004763 ENSHCOG00000004777 noc3l (ENSHCOG00000004797) ENSHCOG00000004807 acta2 (ENSHCOG00000004818) ENSHCOG00000004901 lipf (ENSHCOG00000004913) bbs1 (ENSHCOG00000004920) Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Anabantaria ANCESTRAL SPECIES 18 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Anabantoidei ANCESTRAL SPECIES 10 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Climbing perch MODERN SPECIES 10 rhbdl1 (ENSATEG00000015715) h1-0 (ENSATEG00000015740) rhot2 (ENSATEG00000015791) WDR90 (ENSATEG00000015853) ENSATEG00000015916 ENSATEG00000016020 ENSATEG00000016054 ENSATEG00000016073 decr2 (ENSATEG00000016088) rab11fip3 (ENSATEG00000016103) telo2 (ENSATEG00000016136) #21 ENSATEG00000016172 #20 tmem204 (ENSATEG00000030133) #19 metrn (ENSATEG00000016359) ENSATEG00000016370 ENSATEG00000027066 ##22 ENSATEG00000016409 ENSATEG00000016425 ENSATEG00000016451 ENSATEG00000016599 ENSATEG00000016644 ENSATEG00000016671 #13 ENSATEG00000016686 ##12 nubp2 (ENSATEG00000016699) #11 ATP6V0C (ENSATEG00000016719) ENSATEG00000016732 ENSATEG00000016755 ntn2 (ENSATEG00000016766) nog2 (ENSATEG00000016782) ENSATEG00000016799 ENSATEG00000016822 Siamese fighting fish MODERN SPECIES 9 WDR90 (ENSBSLG00000018831) ENSBSLG00000019284 NLRC3 (ENSBSLG00000019444) ENSBSLG00000019785 ENSBSLG00000019819 ENSBSLG00000019908 RDH13 (ENSBSLG00000020442) decr2 (ENSBSLG00000020452) rab11fip3 (ENSBSLG00000020473) telo2 (ENSBSLG00000020494) #21 IFT140 (ENSBSLG00000020602) #20 tmem204 (ENSBSLG00000020653) #19 ENSBSLG00000020655 metrn (ENSBSLG00000020656) stub1 (ENSBSLG00000020657) crp2 (ENSBSLG00000020662) ##22 PRR35 (ENSBSLG00000020664) ABLIM1 (ENSBSLG00000020669) ENSBSLG00000020673 ENSBSLG00000020675 ##12 nubp2 (ENSBSLG00000020683) #11 ATP6V0C (ENSBSLG00000020689) TBC1D24 (ENSBSLG00000020690) ENSBSLG00000004980 ntn2 (ENSBSLG00000005025) nog2 (ENSBSLG00000005108) ENSBSLG00000005142 ENSBSLG00000005415 ENSBSLG00000005423 MSS51 (ENSBSLG00000005455) cog7 (ENSBSLG00000005525) Zig-zag eel MODERN SPECIES 10 rhbdl1 (ENSMAMG00000009868) h1-0 (ENSMAMG00000009899) rhot2 (ENSMAMG00000009929) WDR90 (ENSMAMG00000025729) ENSMAMG00000010013 ENSMAMG00000010023 ENSMAMG00000010387 ENSMAMG00000010045 decr2 (ENSMAMG00000010056) rab11fip3 (ENSMAMG00000010078) telo2 (ENSMAMG00000010100) #21 ENSMAMG00000010148 #20 tmem204 (ENSMAMG00000025271) #19 metrn (ENSMAMG00000010298) ENSMAMG00000010308 ENSMAMG00000010328 ##22 ENSMAMG00000010337 ENSMAMG00000010355 ENSMAMG00000010525 ENSMAMG00000010548 ENSMAMG00000010583 #13 ENSMAMG00000010617 ##12 nubp2 (ENSMAMG00000010637) #11 ATP6V0C (ENSMAMG00000025214) ENSMAMG00000010662 ENSMAMG00000010692 ntn2 (ENSMAMG00000010731) nog2 (ENSMAMG00000010740) ENSMAMG00000010756 ENSMAMG00000010762 ENSMAMG00000026355 Carangaria ANCESTRAL SPECIES 13 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B ENSGT00940000158312.e Turbot MODERN SPECIES 9 WDR90 (ENSSMAG00000013121) ENSSMAG00000013140 ENSSMAG00000013184 ENSSMAG00000013377 ENSSMAG00000013904 ENSSMAG00000013406 decr2 (ENSSMAG00000013422) rab11fip3 (ENSSMAG00000013454) telo2 (ENSSMAG00000013475) #21 ENSSMAG00000013638 #20 tmem204 (ENSSMAG00000025781) #19 ENSSMAG00000013737 metrn (ENSSMAG00000013814) ENSSMAG00000013837 ENSSMAG00000013859 ENSSMAG00000035710 ##22 ENSSMAG00000013881 ENSSMAG00000014171 ENSSMAG00000014201 ENSSMAG00000014224 #13 ENSSMAG00000014256 ##12 nubp2 (ENSSMAG00000014291) #11 ATP6V0C (ENSSMAG00000014308) ENSSMAG00000014320 ENSSMAG00000014337 ntn2 (ENSSMAG00000014362) ENSSMAG00000014370 ENSSMAG00000014384 nog2 (ENSSMAG00000014390) ENSSMAG00000031672 ENSSMAG00000014414 Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Barramundi perch MODERN SPECIES 195 rhot2 (ENSLCAG00010026687) WDR90 (ENSLCAG00010026707) ENSLCAG00010026709 NLRC3 (ENSLCAG00010026715) ENSLCAG00010026720 SBK1 (ENSLCAG00010026724) RDH13 (ENSLCAG00010026728) decr2 (ENSLCAG00010026732) ENSLCAG00010026738 telo2 (ENSLCAG00010026740) #21 IFT140 (ENSLCAG00010026753) #20 tmem204 (ENSLCAG00010026761) #19 ENSLCAG00010026762 metrn (ENSLCAG00010026764) stub1 (ENSLCAG00010026765) crp2 (ENSLCAG00010026767) ##22 ENSLCAG00010026769 ENSLCAG00010026773 MPRIP (ENSLCAG00010026790) ablim1b (ENSLCAG00010026799) ENSLCAG00010000239 ENSLCAG00010000268 #13 ENSLCAG00010000282 ##12 nubp2 (ENSLCAG00010000302) #11 ATP6V0C (ENSLCAG00010000340) TBC1D24 (ENSLCAG00010000372) ENSLCAG00010000383 ntn2 (ENSLCAG00010000396) nog2 (ENSLCAG00010000410) MSS51 (ENSLCAG00010000486) MSS51 (ENSLCAG00010000491) Seriola ANCESTRAL SPECIES 1 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Greater amberjack MODERN SPECIES 27 NLRC3 (ENSSDUG00000001738) NLRC3 (ENSSDUG00000001713) ENSSDUG00000001691 SBK1 (ENSSDUG00000001677) RDH13 (ENSSDUG00000001644) decr2 (ENSSDUG00000001591) rab11fip3 (ENSSDUG00000001557) telo2 (ENSSDUG00000001531) #21 ENSSDUG00000001510 #20 ENSSDUG00000001498 #20 tmem204 (ENSSDUG00000001480) #19 IFT140 (ENSSDUG00000001391) #20 ENSSDUG00000001311 metrn (ENSSDUG00000001304) stub1 (ENSSDUG00000001294) crp2 (ENSSDUG00000001278) ##22 ENSSDUG00000001243 ENSSDUG00000001215 MPRIP (ENSSDUG00000001143) ablim1b (ENSSDUG00000001109) ENSSDUG00000001052 ENSSDUG00000001038 #13 ENSSDUG00000001009 ##12 nubp2 (ENSSDUG00000000978) #11 ATP6V0C (ENSSDUG00000000954) TBC1D24 (ENSSDUG00000000932) ENSSDUG00000000851 ntn2 (ENSSDUG00000000780) nog2 (ENSSDUG00000000764) ENSSDUG00000000750 CAPN15 (ENSSDUG00000000678) Yellowtail amberjack MODERN SPECIES 2878 rhot2 (ENSSLDG00000013112) WDR90 (ENSSLDG00000013040) ENSSLDG00000013000 NLRC3 (ENSSLDG00000012959) ENSSLDG00000012933 SBK1 (ENSSLDG00000012906) RDH13 (ENSSLDG00000012882) decr2 (ENSSLDG00000012860) rab11fip3 (ENSSLDG00000012839) telo2 (ENSSLDG00000012809) #21 tmem204 (ENSSLDG00000012790) #19 IFT140 (ENSSLDG00000012671) #20 ENSSLDG00000012609 metrn (ENSSLDG00000012588) stub1 (ENSSLDG00000012577) crp2 (ENSSLDG00000012559) ##22 PRR35 (ENSSLDG00000012526) ENSSLDG00000012487 MPRIP (ENSSLDG00000012327) ablim1b (ENSSLDG00000012253) ENSSLDG00000012191 ENSSLDG00000012162 #13 ENSSLDG00000012132 ##12 nubp2 (ENSSLDG00000012088) #11 ATP6V0C (ENSSLDG00000012068) TBC1D24 (ENSSLDG00000012032) ENSSLDG00000012002 ntn2 (ENSSLDG00000011975) nog2 (ENSSLDG00000011955) ENSSLDG00000011931 CAPN15 (ENSSLDG00000011854) Eupercaria ANCESTRAL SPECIES 10 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B Tetraodontidae ANCESTRAL SPECIES ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Fugu MODERN SPECIES h1-0 (ENSTRUG00000024571) rhot2 (ENSTRUG00000015409) WDR90 (ENSTRUG00000015307) ENSTRUG00000015257 NLRC3 (ENSTRUG00000015221) ENSTRUG00000015211 SBK1 (ENSTRUG00000015195) RDH13 (ENSTRUG00000015139) decr2 (ENSTRUG00000015094) rab11fip3 (ENSTRUG00000015066) telo2 (ENSTRUG00000014963) #21 IFT140 (ENSTRUG00000014865) #20 tmem204 (ENSTRUG00000028725) #19 metrn (ENSTRUG00000025221) stub1 (ENSTRUG00000014817) crp2 (ENSTRUG00000014803) ##22 ENSTRUG00000025439 MPRIP (ENSTRUG00000014685) ABLIM1 (ENSTRUG00000027510) ENSTRUG00000014585 ENSTRUG00000023248 #13 ENSTRUG00000025985 ##12 TBC1D24 (ENSTRUG00000014498) ntn2 (ENSTRUG00000014332) nog2 (ENSTRUG00000014323) ENSTRUG00000031750 CAPN15 (ENSTRUG00000014283) MSS51 (ENSTRUG00000014257) MSS51 (ENSTRUG00000032136) cog7 (ENSTRUG00000014115) ENSTRUG00000014088 Tetraodon MODERN SPECIES 13 h1-0 (ENSTNIG00000012823) rhot2 (ENSTNIG00000012822) WDR90 (ENSTNIG00000012821) ENSTNIG00000012820 NLRC3 (ENSTNIG00000012819) ENSTNIG00000012818 SBK1 (ENSTNIG00000012817) RDH13 (ENSTNIG00000012816) decr2 (ENSTNIG00000012815) RAB11FIP3 (ENSTNIG00000012814) telo2 (ENSTNIG00000012813) #21 IFT140 (ENSTNIG00000012812) #20 tmem204 (ENSTNIG00000012811) #19 metrn (ENSTNIG00000012810) stub1 (ENSTNIG00000012809) crp2 (ENSTNIG00000000855) ##22 PRR35 (ENSTNIG00000012808) MPRIP (ENSTNIG00000012807) ABLIM1 (ENSTNIG00000012806) ENSTNIG00000001356 ENSTNIG00000012805 ENSTNIG00000012804 #13 ENSTNIG00000012803 ##12 nubp2 (ENSTNIG00000012802) #11 ATP6V0C (ENSTNIG00000012801) TBC1D24 (ENSTNIG00000012800) ENSTNIG00000012799 ntn2 (ENSTNIG00000012798) nog2 (ENSTNIG00000012797) ENSTNIG00000012796 ENSTNIG00000012795 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B Ballan wrasse MODERN SPECIES 103 WDR90 (ENSLBEG00000015236) ENSLBEG00000015048 ENSLBEG00000015000 NLRC3 (ENSLBEG00000014850) ENSLBEG00000014794 SBK1 (ENSLBEG00000014782) RDH13 (ENSLBEG00000014762) decr2 (ENSLBEG00000014726) rab11fip3 (ENSLBEG00000014681) telo2 (ENSLBEG00000014633) #21 tmem204 (ENSLBEG00000014616) #19 IFT140 (ENSLBEG00000014502) #20 ENSLBEG00000014418 metrn (ENSLBEG00000014389) stub1 (ENSLBEG00000014362) crp2 (ENSLBEG00000014340) ##22 ENSLBEG00000014324 ENSLBEG00000014299 MPRIP (ENSLBEG00000014183) ablim1b (ENSLBEG00000014091) ENSLBEG00000014037 ENSLBEG00000014000 #13 ENSLBEG00000013963 ##12 nubp2 (ENSLBEG00000013929) #11 ATP6V0C (ENSLBEG00000013910) TBC1D24 (ENSLBEG00000013880) ENSLBEG00000013844 ntn2 (ENSLBEG00000013806) nog2 (ENSLBEG00000013774) ENSLBEG00000013738 ENSLBEG00000013719 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000171912 ENSGT00940000163335 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Large yellow croaker MODERN SPECIES 488 h1-0 (ENSLCRG00005010659) rhot2 (ENSLCRG00005008269) WDR90 (ENSLCRG00005008125) ENSLCRG00005008113 NLRC3 (ENSLCRG00005008110) ENSLCRG00005008108 RDH13 (ENSLCRG00005008107) decr2 (ENSLCRG00005008091) rab11fip3 (ENSLCRG00005008089) telo2 (ENSLCRG00005007368) #21 tmem204 (ENSLCRG00005007359) #19 IFT140 (ENSLCRG00005007275) #20 ENSLCRG00005007266 metrn (ENSLCRG00005007265) stub1 (ENSLCRG00005007262) crp2 (ENSLCRG00005011150) ##22 PRR35 (ENSLCRG00005011147) ENSLCRG00005011143 MPRIP (ENSLCRG00005010537) ablim1b (ENSLCRG00005010527) ENSLCRG00005010525 ENSLCRG00005010524 #13 ENSLCRG00005010521 ##12 nubp2 (ENSLCRG00005010439) #11 ATP6V0C (ENSLCRG00005010434) TBC1D24 (ENSLCRG00005010433) ENSLCRG00005010432 ntn2 (ENSLCRG00005010430) nog2 (ENSLCRG00005010428) ENSLCRG00005010420 CAPN15 (ENSLCRG00005010225) European seabass MODERN SPECIES 11 H10 (ENSDLAG00005032394) WDR90 (ENSDLAG00005005444) ENSDLAG00005006125 ENSDLAG00005006214 ENSDLAG00005006281 ENSDLAG00005026837 ENSDLAG00005006310 decr2 (ENSDLAG00005006319) rab11fip3 (ENSDLAG00005030794) telo2 (ENSDLAG00005006468) #21 ENSDLAG00005007071 #20 tmem204 (ENSDLAG00005030136) #19 ENSDLAG00005035067 metrn (ENSDLAG00005027335) ENSDLAG00005007372 ENSDLAG00005007389 ##22 ENSDLAG00005007396 ENSDLAG00005007415 ENSDLAG00005007478 ENSDLAG00005008922 ENSDLAG00005008970 ENSDLAG00005032822 #13 ENSDLAG00005033812 ##12 nubp2 (ENSDLAG00005009011) #11 VATL (ENSDLAG00005030834) ENSDLAG00005009116 ENSDLAG00005009119 ntn2 (ENSDLAG00005009141) nog2 (ENSDLAG00005009159) ENSDLAG00005009161 ENSDLAG00005009199 Gilthead seabream MODERN SPECIES 12 MIRO-2 (ENSSAUG00010016475) WDR90 (ENSSAUG00010016789) ENSSAUG00010016813 NLRC3 (ENSSAUG00010016815) ENSSAUG00010016817 SBK1 (ENSSAUG00010016822) RDH13 (ENSSAUG00010016824) decr2 (ENSSAUG00010016826) rab11fip3 (ENSSAUG00010016832) telo2 (ENSSAUG00010016836) #21 IFT140 (ENSSAUG00010016908) #20 tmem204 (ENSSAUG00010016944) #19 ENSSAUG00010016947 metrn (ENSSAUG00010016950) stub1 (ENSSAUG00010016951) crp2 (ENSSAUG00010016953) ##22 PRR35 (ENSSAUG00010016954) ENSSAUG00010016957 MPRIP (ENSSAUG00010016963) ablim1b (ENSSAUG00010016992) ENSSAUG00010018226 ENSSAUG00010018228 #13 ENSSAUG00010016130 ##12 nubp2 (ENSSAUG00010016136) #11 ATP6V0C (ENSSAUG00010016151) TBC1D24 (ENSSAUG00010016158) ENSSAUG00010016162 ntn2 (ENSSAUG00010016169) nog2 (ENSSAUG00010016171) ENSSAUG00010016172 CAPN15 (ENSSAUG00010016176) Perciformes ANCESTRAL SPECIES 9 ENSGT00940000171912 ENSGT00940000163335 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B Perciformes_a ANCESTRAL SPECIES 8 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163071 ENSGT00940000163984.B Pike perch MODERN SPECIES 89 zgc:112496 (ENSSLUG00000014094) rhbdl1 (ENSSLUG00000014081) h1-0 (ENSSLUG00000014072) rhot2 (ENSSLUG00000013432) WDR90 (ENSSLUG00000012997) NLRC3 (ENSSLUG00000012952) ENSSLUG00000012945 RDH13 (ENSSLUG00000012936) decr2 (ENSSLUG00000012929) RAB11FIP3 (ENSSLUG00000012913) telo2 (ENSSLUG00000012537) #21 tmem204 (ENSSLUG00000012496) #19 IFT140 (ENSSLUG00000012473) #20 metrn (ENSSLUG00000022473) stub1 (ENSSLUG00000022465) crp2 (ENSSLUG00000022460) ##22 PRR35 (ENSSLUG00000022457) ENSSLUG00000022452 MPRIP (ENSSLUG00000022377) ablim1b (ENSSLUG00000022350) ablim1b (ENSSLUG00000022347) ENSSLUG00000022342 Cottioidei ANCESTRAL SPECIES 12 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Lumpfish MODERN SPECIES 10 ENSCLMG00005010596 ENSCLMG00005010603 NLRC3 (ENSCLMG00005010762) ENSCLMG00005010763 SBK1 (ENSCLMG00005010765) RDH13 (ENSCLMG00005010767) decr2 (ENSCLMG00005010768) rab11fip3 (ENSCLMG00005010769) telo2 (ENSCLMG00005010771) #21 ENSCLMG00005011072 #20 tmem204 (ENSCLMG00005011074) #19 ENSCLMG00005011078 #20 ENSCLMG00005011080 metrn (ENSCLMG00005011081) stub1 (ENSCLMG00005011082) crp2 (ENSCLMG00005011083) ##22 PRR35 (ENSCLMG00005011084) ENSCLMG00005011085 ENSCLMG00005011088 MPRIP (ENSCLMG00005011092) ENSCLMG00005011315 ENSCLMG00005011321 ENSCLMG00005011337 #13 ENSCLMG00005011338 ##12 nubp2 (ENSCLMG00005011341) #11 ATP6V0C (ENSCLMG00005011370) TBC1D24 (ENSCLMG00005011375) ENSCLMG00005011457 ntn2 (ENSCLMG00005011460) nog2 (ENSCLMG00005011461) ENSCLMG00005011462 Stickleback MODERN SPECIES 5 lyrm1 (ENSGACG00000008548) ENSGACG00000008541 med24 (ENSGACG00000008529) ENSGACG00000008526 top2a (ENSGACG00000008498) GJD3 (ENSGACG00000008497) SBK1 (ENSGACG00000008495) RDH13 (ENSGACG00000008490) decr2 (ENSGACG00000008467) RAB11FIP3 (ENSGACG00000008461) telo2 (ENSGACG00000008442) #21 tmem204 (ENSGACG00000008436) #19 IFT140 (ENSGACG00000008423) #20 metrn (ENSGACG00000008419) stub1 (ENSGACG00000008414) crp2 (ENSGACG00000008405) ##22 PRR35 (ENSGACG00000008401) ENSGACG00000008397 MPRIP (ENSGACG00000008379) ablim1b (ENSGACG00000008370) ENSGACG00000008354 ENSGACG00000008345 ENSGACG00000008342 #13 ENSGACG00000008335 ##12 nubp2 (ENSGACG00000008320) #11 ATP6V0C (ENSGACG00000008293) TBC1D24 (ENSGACG00000008278) ENSGACG00000008273 ntn2 (ENSGACG00000008270) nog2 (ENSGACG00000008267) ENSGACG00000008256 Ovalentaria ANCESTRAL SPECIES 13 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Pomacentridae ANCESTRAL SPECIES 13 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Pomacentridae_A ANCESTRAL SPECIES 11 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Amphiprion ANCESTRAL SPECIES 28 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000158312.e ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00950000182933.B.a.a Clown anemonefish MODERN SPECIES 2270 telo2 (ENSAOCG00000016882) #21 IFT140 (ENSAOCG00000016843) #20 tmem204 (ENSAOCG00000016724) #19 ENSAOCG00000016702 metrn (ENSAOCG00000016659) stub1 (ENSAOCG00000016644) crp2 (ENSAOCG00000016604) ##22 Orange clownfish MODERN SPECIES 10 ENSAPEG00000007091 ENSAPEG00000007121 ENSAPEG00000007171 NLRC3 (ENSAPEG00000007222) ENSAPEG00000007313 SBK1 (ENSAPEG00000007332) RDH13 (ENSAPEG00000007357) decr2 (ENSAPEG00000007393) rab11fip3 (ENSAPEG00000007451) telo2 (ENSAPEG00000007494) #21 IFT140 (ENSAPEG00000007628) #20 tmem204 (ENSAPEG00000007750) #19 ENSAPEG00000007770 metrn (ENSAPEG00000007805) stub1 (ENSAPEG00000007820) crp2 (ENSAPEG00000007829) ##22 PRR35 (ENSAPEG00000007846) ENSAPEG00000007856 MPRIP (ENSAPEG00000007906) ablim1b (ENSAPEG00000007990) ENSAPEG00000008013 ENSAPEG00000008043 ##12 nubp2 (ENSAPEG00000008059) #11 ATP6V0C (ENSAPEG00000008089) TBC1D24 (ENSAPEG00000008117) ENSAPEG00000008139 ntn2 (ENSAPEG00000008233) nog2 (ENSAPEG00000008436) CAPN15 (ENSAPEG00000008463) MSS51 (ENSAPEG00000008549) MSS51 (ENSAPEG00000008557) Spiny chromis MODERN SPECIES 92 ENSAPOG00000020845 ENSAPOG00000020890 ENSAPOG00000020908 NLRC3 (ENSAPOG00000020988) ENSAPOG00000021014 SBK1 (ENSAPOG00000021052) RDH13 (ENSAPOG00000021077) decr2 (ENSAPOG00000021155) rab11fip3 (ENSAPOG00000021205) telo2 (ENSAPOG00000021309) #21 tmem204 (ENSAPOG00000021334) #19 IFT140 (ENSAPOG00000021405) #20 ENSAPOG00000021448 metrn (ENSAPOG00000021473) stub1 (ENSAPOG00000021507) crp2 (ENSAPOG00000021519) ##22 ENSAPOG00000021535 ENSAPOG00000021556 ccdc57 (ENSAPOG00000021685) ENSAPOG00000021758 slc16a3b (ENSAPOG00000021776) CSNK1D (ENSAPOG00000021837) Bicolor damselfish MODERN SPECIES 1372 SBK1 (ENSSPAG00000001800) RDH13 (ENSSPAG00000001814) decr2 (ENSSPAG00000001828) RAB11FIP3 (ENSSPAG00000001839) telo2 (ENSSPAG00000001863) #21 IFT140 (ENSSPAG00000001878) #20 tmem204 (ENSSPAG00000001944) #19 ENSSPAG00000001959 metrn (ENSSPAG00000001991) stub1 (ENSSPAG00000001998) ENSSPAG00000002020 crp2 (ENSSPAG00000002024) ##22 Cichlidae ANCESTRAL SPECIES 15 ENSGT00940000160173 ENSGT00940000171912 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00940000157969 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT00990000204060 ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198.c ENSGT00940000165198.d ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Haplochromini ANCESTRAL SPECIES 17 ENSGT00940000163984.B ENSGT00390000006009.a.a.b ENSGT00940000153882.a.b.b.a ENSGT00940000153470.a.b.a ENSGT00410000025739.c.a ENSGT00550000074873.ob.a.b.b ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198.d.a ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198.c Burton s mouthbrooder MODERN SPECIES 1098 tmem204 (ENSHBUG00000013245) #19 IFT140 (ENSHBUG00000013386) #20 ENSHBUG00000013410 metrn (ENSHBUG00000013430) stub1 (ENSHBUG00000013440) crp2 (ENSHBUG00000013447) ##22 ENSHBUG00000013493 MPRIP (ENSHBUG00000013565) Haplochromini_A ANCESTRAL SPECIES 16 ENSGT00940000163984.B ENSGT00390000006009.a.a.b ENSGT00940000153882.a.b.b.a ENSGT00940000153470.a.b.a ENSGT00410000025739.c.a ENSGT00550000074873.ob.a.b.b ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198.d.a ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198.c.a Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00940000163984.B ENSGT00390000006009.a.a.b ENSGT00940000153882.a.b.b.a ENSGT00940000153470.a.b.a ENSGT00410000025739.c.a ENSGT00550000074873.ob.a.b.b ENSGT00950000183193.A.c.b #11 ENSGT01030000234629.E.a.a ##12 ENSGT00530000063937.b #13 ENSGT00940000165198.d.a ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000013678 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198.c.a Eastern happy MODERN SPECIES 20 ENSACLG00000010395 nog2 (ENSACLG00000010400) ntn2 (ENSACLG00000010413) ENSACLG00000010422 TBC1D24 (ENSACLG00000010489) ATP6V0C (ENSACLG00000010503) nubp2 (ENSACLG00000010518) #11 ENSACLG00000010555 ##12 ENSACLG00000010570 #13 ENSACLG00000010627 IFT140 (ENSACLG00000010766) #20 tmem204 (ENSACLG00000011031) #19 ENSACLG00000011056 metrn (ENSACLG00000011147) stub1 (ENSACLG00000011159) crp2 (ENSACLG00000011181) ##22 ENSACLG00000011190 MPRIP (ENSACLG00000011202) ENSACLG00000011281 ENSACLG00000011282 telo2 (ENSACLG00000011423) #21 RAB11FIP3 (ENSACLG00000011453) decr2 (ENSACLG00000011482) RDH13 (ENSACLG00000011490) SBK1 (ENSACLG00000011494) ENSACLG00000011502 NLRC3 (ENSACLG00000011522) ENSACLG00000011546 WDR90 (ENSACLG00000011558) rhot2 (ENSACLG00000011733) h1-0 (ENSACLG00000011821) Zebra mbuna MODERN SPECIES 136 tmem204 (ENSMZEG00005028067) #19 IFT140 (ENSMZEG00005028066) #20 ENSMZEG00005028065 metrn (ENSMZEG00005028064) stub1 (ENSMZEG00005028063) crp2 (ENSMZEG00005028062) ##22 PRR35 (ENSMZEG00005028061) MPRIP (ENSMZEG00005028060) ABLIM1 (ENSMZEG00005028059) ENSMZEG00005028058 P. nyererei MODERN SPECIES 767 IFT140 (ENSPNYG00000001176) #20 tmem204 (ENSPNYG00000001410) #19 ENSPNYG00000001434 metrn (ENSPNYG00000001527) stub1 (ENSPNYG00000001539) crp2 (ENSPNYG00000001572) ##22 PRR35 (ENSPNYG00000001583) MPRIP (ENSPNYG00000001662) ABLIM1 (ENSPNYG00000001863) ENSPNYG00000001913 Lyretail cichlid MODERN SPECIES 366 ENSNBRG00000023012 ENSNBRG00000023022 NLRC3 (ENSNBRG00000023030) ENSNBRG00000023048 SBK1 (ENSNBRG00000023062) RDH13 (ENSNBRG00000023071) decr2 (ENSNBRG00000023104) rab11fip3 (ENSNBRG00000023171) telo2 (ENSNBRG00000023223) #21 IFT140 (ENSNBRG00000023302) #20 tmem204 (ENSNBRG00000023339) #19 ENSNBRG00000023352 metrn (ENSNBRG00000023374) stub1 (ENSNBRG00000023380) ENSNBRG00000000380 crp2 (ENSNBRG00000000412) ##22 PRR35 (ENSNBRG00000000431) ENSNBRG00000000460 ENSNBRG00000000487 ENSNBRG00000000494 ablim1b (ENSNBRG00000000508) ENSNBRG00000000545 Nile tilapia MODERN SPECIES 20 h1-0 (ENSONIG00000037924) rhot2 (ENSONIG00000019988) WDR90 (ENSONIG00000019995) ENSONIG00000029102 NLRC3 (ENSONIG00000020002) ENSONIG00000020003 RDH13 (ENSONIG00000020005) decr2 (ENSONIG00000020008) telo2 (ENSONIG00000020010) #21 tmem204 (ENSONIG00000020013) #19 IFT140 (ENSONIG00000020012) #20 ENSONIG00000020014 RAB11FIP3 (ENSONIG00000020009) metrn (ENSONIG00000020015) stub1 (ENSONIG00000042182) crp2 (ENSONIG00000038131) ##22 ENSONIG00000029887 MPRIP (ENSONIG00000020019) ABLIM1 (ENSONIG00000020020) ENSONIG00000020021 ENSONIG00000020022 #13 ENSONIG00000020023 ##12 nubp2 (ENSONIG00000020024) #11 ATP6V0C (ENSONIG00000020025) TBC1D24 (ENSONIG00000020026) ENSONIG00000020027 ntn2 (ENSONIG00000020028) nog2 (ENSONIG00000021210) ENSONIG00000020029 CAPN15 (ENSONIG00000020030) MSS51 (ENSONIG00000020031) Midas cichlid MODERN SPECIES 194 ercc4 (ENSACIG00000006457) cpped1 (ENSACIG00000006487) shisa9a (ENSACIG00000006519) SNX29 (ENSACIG00000006544) ENSACIG00000006592 ENSACIG00000006599 rsl1d1 (ENSACIG00000006608) gspt1 (ENSACIG00000006643) dmc1 (ENSACIG00000006683) tomm22 (ENSACIG00000006779) IFT140 (ENSACIG00000006800) #20 tmem204 (ENSACIG00000006990) #19 ENSACIG00000007006 metrn (ENSACIG00000007044) stub1 (ENSACIG00000007066) crp2 (ENSACIG00000007113) ##22 ENSACIG00000007133 ENSACIG00000007148 ENSACIG00000007193 ablim1b (ENSACIG00000007205) ENSACIG00000007227 ENSACIG00000007253 #13 ENSACIG00000007278 ##12 nubp2 (ENSACIG00000007318) #11 ATP6V0C (ENSACIG00000007338) TBC1D24 (ENSACIG00000007348) ENSACIG00000007364 ntn2 (ENSACIG00000007431) nog2 (ENSACIG00000007558) CAPN15 (ENSACIG00000007568) MSS51 (ENSACIG00000007594) Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Oryzias ANCESTRAL SPECIES 11 ENSGT00940000160173 ENSGT00940000179470 ENSGT00940000157969 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Oryzias_b ANCESTRAL SPECIES 9 ENSGT00940000160173 ENSGT00940000179470 ENSGT00940000157969 ENSGT00940000180121 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Indian medaka MODERN SPECIES 17 ENSOMEG00000016332 ENSOMEG00000016372 ENSOMEG00000016383 ENSOMEG00000016391 NLRC3 (ENSOMEG00000016416) ENSOMEG00000016446 SBK1 (ENSOMEG00000016472) RDH13 (ENSOMEG00000016507) decr2 (ENSOMEG00000016528) ENSOMEG00000016567 telo2 (ENSOMEG00000016635) #21 ENSOMEG00000016647 #20 tmem204 (ENSOMEG00000016665) #19 IFT140 (ENSOMEG00000016697) #20 stub1 (ENSOMEG00000016713) crp2 (ENSOMEG00000016738) ##22 metrn (ENSOMEG00000000423) ENSOMEG00000016826 MPRIP (ENSOMEG00000017141) ABLIM1 (ENSOMEG00000017233) ENSOMEG00000017305 ENSOMEG00000017346 #13 nubp2 (ENSOMEG00000017373) #11 ENSOMEG00000000433 ##12 TBC1D24 (ENSOMEG00000017447) ENSOMEG00000017484 ntn2 (ENSOMEG00000017535) nog2 (ENSOMEG00000017552) ENSOMEG00000017774 CAPN15 (ENSOMEG00000017877) ENSOMEG00000017899 Javanese ricefish MODERN SPECIES 10 zgc:112496 (ENSOJAG00000020300) rhbdl1 (ENSOJAG00000020270) h1-0 (ENSOJAG00000020261) rhot2 (ENSOJAG00000020001) ENSOJAG00000019601 NLRC3 (ENSOJAG00000019423) ENSOJAG00000019402 RDH13 (ENSOJAG00000019388) decr2 (ENSOJAG00000019338) RAB11FIP3 (ENSOJAG00000019308) telo2 (ENSOJAG00000018852) #21 tmem204 (ENSOJAG00000018834) #19 IFT140 (ENSOJAG00000018626) #20 metrn (ENSOJAG00000018607) stub1 (ENSOJAG00000018591) crp2 (ENSOJAG00000018563) ##22 ENSOJAG00000018544 MPRIP (ENSOJAG00000018315) ablim1b (ENSOJAG00000018215) ENSOJAG00000018137 ENSOJAG00000018108 #13 ENSOJAG00000018094 ##12 NUBP2 (ENSOJAG00000018016) #11 ATP6V0C (ENSOJAG00000017966) TBC1D24 (ENSOJAG00000017948) ENSOJAG00000017916 ntn2 (ENSOJAG00000017890) nog2 (ENSOJAG00000017884) ENSOJAG00000017856 CAPN15 (ENSOJAG00000017486) ENSOJAG00000017470 Oryzias_a ANCESTRAL SPECIES 17 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000179470 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Japanese Medaka HdrR MODERN SPECIES 10 rhot2 (ENSORLG00000007637) ENSORLG00000030286 ENSORLG00000029744 ENSORLG00000007568 NLRC3 (ENSORLG00000007555) ENSORLG00000022303 SBK1 (ENSORLG00000007528) RDH13 (ENSORLG00000007521) decr2 (ENSORLG00000007508) RAB11FIP3 (ENSORLG00000007483) telo2 (ENSORLG00000007472) #21 tmem204 (ENSORLG00000007430) #19 IFT140 (ENSORLG00000007425) #20 metrn (ENSORLG00000027097) stub1 (ENSORLG00000007370) crp2 (ENSORLG00000007351) ##22 ENSORLG00000007335 MPRIP (ENSORLG00000007330) ENSORLG00000007293 ENSORLG00000007252 ENSORLG00000030257 #13 ENSORLG00000007244 ##12 nubp2 (ENSORLG00000007228) #11 ATP6V0C (ENSORLG00000007201) TBC1D24 (ENSORLG00000007193) ENSORLG00000007176 ntn2 (ENSORLG00000007171) nog2 (ENSORLG00000007149) ENSORLG00000029249 ENSORLG00000007139 CAPN15 (ENSORLG00000007128) Chinese medaka MODERN SPECIES 1099 zgc:112496 (ENSOSIG00000009294) rhbdl1 (ENSOSIG00000009292) h1-0 (ENSOSIG00000009291) rhot2 (ENSOSIG00000008489) WDR90 (ENSOSIG00000008099) ENSOSIG00000008094 NLRC3 (ENSOSIG00000008089) ENSOSIG00000008086 decr2 (ENSOSIG00000008081) RAB11FIP3 (ENSOSIG00000008072) telo2 (ENSOSIG00000008068) #21 tmem204 (ENSOSIG00000008065) #19 IFT140 (ENSOSIG00000008058) #20 metrn (ENSOSIG00000008052) stub1 (ENSOSIG00000008048) crp2 (ENSOSIG00000008041) ##22 ENSOSIG00000008037 MPRIP (ENSOSIG00000007794) ABLIM1 (ENSOSIG00000007729) ENSOSIG00000007718 ENSOSIG00000007717 ##12 nubp2 (ENSOSIG00000007693) #11 ATP6V0C (ENSOSIG00000007650) TBC1D24 (ENSOSIG00000007647) ENSOSIG00000007641 ntn2 (ENSOSIG00000007636) nog2 (ENSOSIG00000007632) ENSOSIG00000007619 CAPN15 (ENSOSIG00000007603) MSS51 (ENSOSIG00000007596) MSS51 (ENSOSIG00000007594) Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00940000160651 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Turquoise killifish MODERN SPECIES 1360 crp2 (ENSNFUG00015015186) ##22 Mangrove rivulus MODERN SPECIES 43 rhot2 (ENSKMAG00000012477) ENSKMAG00000012540 ENSKMAG00000012617 ENSKMAG00000012706 NLRC3 (ENSKMAG00000012728) ENSKMAG00000012765 SBK1 (ENSKMAG00000012791) RDH13 (ENSKMAG00000012818) decr2 (ENSKMAG00000012854) rab11fip3 (ENSKMAG00000012905) telo2 (ENSKMAG00000012955) #21 IFT140 (ENSKMAG00000013025) #20 tmem204 (ENSKMAG00000013161) #19 metrn (ENSKMAG00000013175) stub1 (ENSKMAG00000013186) crp2 (ENSKMAG00000013219) ##22 ENSKMAG00000013232 ENSKMAG00000013252 ENSKMAG00000013265 MPRIP (ENSKMAG00000013360) ENSKMAG00000013592 ENSKMAG00000013619 ENSKMAG00000013655 #13 ENSKMAG00000013678 ##12 nubp2 (ENSKMAG00000013705) #11 ATP6V0C (ENSKMAG00000013738) TBC1D24 (ENSKMAG00000013755) ENSKMAG00000013779 ntn2 (ENSKMAG00000013813) nog2 (ENSKMAG00000013828) CAPN15 (ENSKMAG00000013861) Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Poeciliinae ANCESTRAL SPECIES 10 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Poecilia ANCESTRAL SPECIES 22 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a Guppy MODERN SPECIES 449 ENSPREG00000018352 ENSPREG00000018369 NLRC3 (ENSPREG00000018396) ENSPREG00000018427 ENSPREG00000018441 SBK1 (ENSPREG00000018457) RDH13 (ENSPREG00000018465) decr2 (ENSPREG00000018482) RAB11FIP3 (ENSPREG00000018500) telo2 (ENSPREG00000018528) #21 IFT140 (ENSPREG00000018595) #20 tmem204 (ENSPREG00000018636) #19 metrn (ENSPREG00000018650) ENSPREG00000018685 stub1 (ENSPREG00000018698) crp2 (ENSPREG00000018713) ##22 PRR35 (ENSPREG00000018723) ENSPREG00000018744 ENSPREG00000018778 ENSPREG00000018795 ENSPREG00000018817 #13 ENSPREG00000018838 ##12 nubp2 (ENSPREG00000018897) #11 ATP6V0C (ENSPREG00000018910) TBC1D24 (ENSPREG00000018921) ENSPREG00000018954 ntn2 (ENSPREG00000019132) nog2 (ENSPREG00000019142) CAPN15 (ENSPREG00000019164) MSS51 (ENSPREG00000019194) ENSPREG00000019204 NAME_6 ANCESTRAL SPECIES 121 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00940000153417.A #20 ENSGT00390000015528 #19 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000155286.m.a ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 246 WDR90 (ENSPLAG00000018877) ENSPLAG00000018850 NLRC3 (ENSPLAG00000018709) ENSPLAG00000018626 SBK1 (ENSPLAG00000018612) RDH13 (ENSPLAG00000018584) decr2 (ENSPLAG00000018573) RAB11FIP3 (ENSPLAG00000018542) telo2 (ENSPLAG00000018502) #21 IFT140 (ENSPLAG00000018485) #20 tmem204 (ENSPLAG00000018360) #19 metrn (ENSPLAG00000018345) stub1 (ENSPLAG00000018319) ENSPLAG00000018308 ENSPLAG00000018302 ##22 ENSPLAG00000018289 ##22 PRR35 (ENSPLAG00000000419) MPRIP (ENSPLAG00000018254) ENSPLAG00000018223 ENSPLAG00000018190 ENSPLAG00000018148 #13 ENSPLAG00000018126 ##12 nubp2 (ENSPLAG00000018110) #11 ATP6V0C (ENSPLAG00000018090) Sailfin molly MODERN SPECIES 246 rhot2 (ENSPLAG00000018890) WDR90 (ENSPLAG00000018877) ENSPLAG00000018850 NLRC3 (ENSPLAG00000018709) ENSPLAG00000018626 SBK1 (ENSPLAG00000018612) RDH13 (ENSPLAG00000018584) decr2 (ENSPLAG00000018573) RAB11FIP3 (ENSPLAG00000018542) telo2 (ENSPLAG00000018502) #21 IFT140 (ENSPLAG00000018485) #20 tmem204 (ENSPLAG00000018360) #19 metrn (ENSPLAG00000018345) stub1 (ENSPLAG00000018319) ENSPLAG00000018308 ENSPLAG00000018302 ##22 ENSPLAG00000018289 ##22 PRR35 (ENSPLAG00000000419) MPRIP (ENSPLAG00000018254) ENSPLAG00000018223 ENSPLAG00000018190 ENSPLAG00000018148 #13 ENSPLAG00000018126 ##12 nubp2 (ENSPLAG00000018110) #11 ATP6V0C (ENSPLAG00000018090) Amazon molly MODERN SPECIES 713 SBK1 (ENSPFOG00000014318) RDH13 (ENSPFOG00000014331) decr2 (ENSPFOG00000014389) RAB11FIP3 (ENSPFOG00000014436) telo2 (ENSPFOG00000014534) #21 IFT140 (ENSPFOG00000014726) #20 tmem204 (ENSPFOG00000014981) #19 metrn (ENSPFOG00000015001) stub1 (ENSPFOG00000015029) crp2 (ENSPFOG00000015096) ##22 PRR35 (ENSPFOG00000015101) MPRIP (ENSPFOG00000015109) ABLIM1 (ENSPFOG00000015202) ENSPFOG00000015260 ENSPFOG00000015305 #13 ENSPFOG00000015334 ##12 nubp2 (ENSPFOG00000015376) #11 Platyfish MODERN SPECIES 1 h1-0 (ENSXMAG00000020306) rhot2 (ENSXMAG00000001357) ENSXMAG00000029871 ENSXMAG00000021287 NLRC3 (ENSXMAG00000018992) ENSXMAG00000019009 SBK1 (ENSXMAG00000019010) RDH13 (ENSXMAG00000019011) decr2 (ENSXMAG00000020869) RAB11FIP3 (ENSXMAG00000020825) telo2 (ENSXMAG00000019050) #21 IFT140 (ENSXMAG00000019061) #20 tmem204 (ENSXMAG00000019095) #19 metrn (ENSXMAG00000029036) stub1 (ENSXMAG00000000076) crp2 (ENSXMAG00000024415) ##22 PRR35 (ENSXMAG00000000090) MPRIP (ENSXMAG00000000091) ENSXMAG00000029437 ENSXMAG00000000107 ENSXMAG00000000122 ENSXMAG00000009893 #13 ENSXMAG00000020840 ENSXMAG00000009890 ##12 nubp2 (ENSXMAG00000009869) #11 ATP6V0C (ENSXMAG00000009861) TBC1D24 (ENSXMAG00000000127) ENSXMAG00000000130 ENSXMAG00000023095 ntn2 (ENSXMAG00000008784) nog2 (ENSXMAG00000019533) NAME_4 ANCESTRAL SPECIES 15 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00940000157969 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000006698 #21 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000001390.b ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00940000164586.g.b ENSGT00940000155286.m.a ENSGT01090000260189 ENSGT00950000182850.a.a.a ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.b.b ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B Sheepshead minnow MODERN SPECIES 225 rhot2 (ENSCVAG00000001772) WDR90 (ENSCVAG00000001759) ENSCVAG00000001708 NLRC3 (ENSCVAG00000001704) ENSCVAG00000001694 ENSCVAG00000001691 SBK1 (ENSCVAG00000001689) RDH13 (ENSCVAG00000001685) decr2 (ENSCVAG00000001681) rab11fip3 (ENSCVAG00000001674) telo2 (ENSCVAG00000001665) #21 IFT140 (ENSCVAG00000001657) #20 tmem204 (ENSCVAG00000001643) #19 metrn (ENSCVAG00000001637) stub1 (ENSCVAG00000001632) crp2 (ENSCVAG00000001629) ##22 ENSCVAG00000001625 ENSCVAG00000001622 MPRIP (ENSCVAG00000000066) ENSCVAG00000001574 ablim1b (ENSCVAG00000000059) ENSCVAG00000001563 ENSCVAG00000001554 #13 ENSCVAG00000001550 ##12 nubp2 (ENSCVAG00000001546) #11 ATP6V0C (ENSCVAG00000001537) TBC1D24 (ENSCVAG00000001532) ENSCVAG00000001524 ntn2 (ENSCVAG00000001511) nog2 (ENSCVAG00000001502) ENSCVAG00000001497 Mummichog MODERN SPECIES 2201 h1-0 (ENSFHEG00000001753) rhot2 (ENSFHEG00000001777) WDR90 (ENSFHEG00000001807) ENSFHEG00000001819 NLRC3 (ENSFHEG00000001840) ENSFHEG00000001847 SBK1 (ENSFHEG00000001852) RDH13 (ENSFHEG00000001857) decr2 (ENSFHEG00000001869) RAB11FIP3 (ENSFHEG00000001873) telo2 (ENSFHEG00000001887) #21 tmem204 (ENSFHEG00000001892) #19 IFT140 (ENSFHEG00000001905) #20 metrn (ENSFHEG00000001910) stub1 (ENSFHEG00000001916) crp2 (ENSFHEG00000001920) ##22 PRR35 (ENSFHEG00000001922) ENSFHEG00000001929 MPRIP (ENSFHEG00000001970) ENSFHEG00000001983 ablim1b (ENSFHEG00000002012) ENSFHEG00000002023 ENSFHEG00000002027 ##12 nubp2 (ENSFHEG00000002036) #11 ATP6V0C (ENSFHEG00000002041) TBC1D24 (ENSFHEG00000002051) ENSFHEG00000002100 ntn2 (ENSFHEG00000002114) nog2 (ENSFHEG00000002118) ENSFHEG00000000060 CAPN15 (ENSFHEG00000002132) Pinecone sodierfish MODERN SPECIES 10 rhot2 (ENSMMDG00005008451) WDR90 (ENSMMDG00005007894) ENSMMDG00005007857 NLRC3 (ENSMMDG00005007854) ENSMMDG00005007851 SBK1 (ENSMMDG00005007849) RDH13 (ENSMMDG00005007848) decr2 (ENSMMDG00005007835) rab11fip3 (ENSMMDG00005007831) telo2 (ENSMMDG00005007823) #21 tmem204 (ENSMMDG00005007821) #19 IFT140 (ENSMMDG00005007690) #20 ENSMMDG00005007662 metrn (ENSMMDG00005007657) stub1 (ENSMMDG00005007655) crp2 (ENSMMDG00005007652) ##22 ENSMMDG00005007648 MPRIP (ENSMMDG00005006959) ENSMMDG00005006950 ablim1b (ENSMMDG00005006947) ENSMMDG00005006944 ENSMMDG00005006942 #13 ENSMMDG00005006938 ##12 nubp2 (ENSMMDG00005006934) #11 ATP6V0C (ENSMMDG00005006900) TBC1D24 (ENSMMDG00005006898) ENSMMDG00005006896 ntn2 (ENSMMDG00005006892) ENSMMDG00005006889 CAPN15 (ENSMMDG00005006878) ENSMMDG00005006875 Cod MODERN SPECIES 9 ENSGMOG00000025932 ENSGMOG00000013031 ENSGMOG00000013016 ENSGMOG00000025250 ENSGMOG00000015472 ENSGMOG00000000930 ENSGMOG00000018817 ENSGMOG00000013872 #21 tmem204 (ENSGMOG00000013863) #19 ENSGMOG00000013794 #20 ENSGMOG00000036843 ENSGMOG00000027901 metrn (ENSGMOG00000031031) ENSGMOG00000005122 ENSGMOG00000036224 ENSGMOG00000020429 ##22 ENSGMOG00000024983 ENSGMOG00000035228 ENSGMOG00000036342 ENSGMOG00000027465 ENSGMOG00000028001 ENSGMOG00000014837 ENSGMOG00000008818 ENSGMOG00000035188 ENSGMOG00000015066 ENSGMOG00000032057 ENSGMOG00000030603 ENSGMOG00000024451 ENSGMOG00000025655 ENSGMOG00000027677 ENSGMOG00000023605 Protacanthopterygii ANCESTRAL SPECIES 54 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a ENSGT00410000025739.c.a ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a ENSGT00390000006009.a.a.b ENSGT00940000163984.B ENSGT00940000158312.e ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00950000182933.B.a.a ENSGT00990000204060 ENSGT00930000151045.f ENSGT01100000263515.a.b.a.b.a.h ##22 ENSGT00530000063870.b ENSGT00390000001390.b ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528 #19 ENSGT00940000153417.A #20 ENSGT00390000006698 #21 ENSGT00440000033742.a.a ENSGT00940000153801.a ENSGT00940000159641 ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 9 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a.a ENSGT00410000025739.c.a.k ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a.c ENSGT00390000006009.a.a.b.c.a ENSGT00940000163071.k ENSGT00940000159856.c ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00950000182933.B.a.a ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00930000151045.f.d ENSGT01100000263515.a.b.a.b.a.h.f ##22 ENSGT00530000063870.b.d ENSGT00550000074847.l ENSGT00390000001390.b.d ENSGT00390000015528.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a.a ENSGT00410000025739.c.a.k ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a.c ENSGT00390000006009.a.a.b.c.a ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00950000182933.B.a.a ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00440000033742.a.a.a ENSGT00940000153801.a.c ENSGT00940000159641 ENSGT00940000154852.a.f ENSGT00530000066748.c ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000160173 Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a.a ENSGT00410000025739.c.a.k ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a.c ENSGT00390000006009.a.a.b.c.a ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00440000033742.a.a.a ENSGT00940000153801.a.c ENSGT00940000159641 ENSGT00940000154852.a.f ENSGT00530000066748.c ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000160173 Rainbow trout MODERN SPECIES 7 ENSOMYG00000007261 ENSOMYG00000007186 #13 ENSOMYG00000007151 ##12 nubp2 (ENSOMYG00000007090) #11 atp6v0cb (ENSOMYG00000006791) ENSOMYG00000062193 ENSOMYG00000006713 ntn2 (ENSOMYG00000006571) ENSOMYG00000006557 ENSOMYG00000006547 ENSOMYG00000006503 ENSOMYG00000006472 ENSOMYG00000066292 ENSOMYG00000075510 ENSOMYG00000006426 ENSOMYG00000006401 ##22 ENSOMYG00000006377 ENSOMYG00000006322 tmem204 (ENSOMYG00000006244) #19 ENSOMYG00000006092 #20 rab11fip3 (ENSOMYG00000005736) decr2 (ENSOMYG00000005700) ENSOMYG00000005562 ENSOMYG00000005531 ENSOMYG00000074533 ENSOMYG00000005465 ENSOMYG00000005396 cluap1 (ENSOMYG00000005065) ENSOMYG00000023898 WDR90 (ENSOMYG00000023301) ENSOMYG00000022971 Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00940000165198 ENSGT00530000063937.b #13 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a.a ENSGT00410000025739.c.a.k ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a.c ENSGT00390000006009.a.a.b.c.a ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00440000033742.a.a.a ENSGT00940000153801.a.c ENSGT00940000159641 ENSGT00940000154852.a.f ENSGT00530000066748.c ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000160173 Chinook salmon MODERN SPECIES 16 ENSOTSG00005007102 ENSOTSG00005007101 #13 ENSOTSG00005007100 ##12 nubp2 (ENSOTSG00005007099) #11 ATP6V0C (ENSOTSG00005007090) TBC1D24 (ENSOTSG00005007088) ENSOTSG00005007084 ntn2 (ENSOTSG00005007082) ENSOTSG00005007079 ENSOTSG00005007077 ENSOTSG00005007075 MSS51 (ENSOTSG00005007070) MSS51 (ENSOTSG00005007068) ENSOTSG00005007066 stub1 (ENSOTSG00005007063) ENSOTSG00005007061 ##22 ENSOTSG00005007060 metrn (ENSOTSG00005007059) ENSOTSG00005007057 ENSOTSG00005007055 ENSOTSG00005007050 tmem204 (ENSOTSG00005007049) #19 IFT140 (ENSOTSG00005007033) #20 rab11fip3 (ENSOTSG00005007028) decr2 (ENSOTSG00005006979) RDH13 (ENSOTSG00005006978) SBK1 (ENSOTSG00005006975) ENSOTSG00005006973 NLRC3 (ENSOTSG00005006907) cluap1 (ENSOTSG00005006901) ENSOTSG00005006898 Coho salmon MODERN SPECIES 12 ENSOKIG00005026670 #13 ENSOKIG00005026657 ##12 nubp2 (ENSOKIG00005026636) #11 ENSOKIG00005026507 TBC1D24 (ENSOKIG00005026491) ENSOKIG00005026468 ntn2 (ENSOKIG00005026423) ENSOKIG00005026415 ENSOKIG00005026406 ENSOKIG00005026385 CAPN15 (ENSOKIG00005026072) MSS51 (ENSOKIG00005026050) MSS51 (ENSOKIG00005026028) ENSOKIG00005026013 stub1 (ENSOKIG00005026005) ENSOKIG00005025993 ##22 PRR35 (ENSOKIG00005025987) metrn (ENSOKIG00005025983) ENSOKIG00005025971 ENSOKIG00005025965 tmem204 (ENSOKIG00005025958) #19 IFT140 (ENSOKIG00005025768) #20 rab11fip3 (ENSOKIG00005025727) decr2 (ENSOKIG00005025606) RDH13 (ENSOKIG00005025582) SBK1 (ENSOKIG00005025575) ENSOKIG00005025568 ENSOKIG00005025542 NLRC3 (ENSOKIG00005025523) cluap1 (ENSOKIG00005025451) ENSOKIG00005025411 Salmo ANCESTRAL SPECIES 3 ENSGT01030000234629.E.a.a ##12 ENSGT00950000183193.A.c.b #11 ENSGT00550000074873.ob.a.a.a.a ENSGT00410000025739.c.a.k ENSGT00940000153470.a.b.a ENSGT00940000153882.a.b.b.a.c ENSGT00390000006009.a.a.b.c.a ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00940000158962.d.b.b ENSGT00930000151045.e.c.b ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00940000160069 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00440000033742.a.a.a ENSGT00940000153801.a.c ENSGT00940000159641 ENSGT00940000154852.a.f ENSGT00530000066748.c ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000166280 ENSGT00940000160173 River trout MODERN SPECIES 11 MPRIP (ENSSTUG00000013567) ENSSTUG00000013516 ENSSTUG00000013502 #13 ENSSTUG00000013491 ##12 nubp2 (ENSSTUG00000013402) #11 ATP6V0C (ENSSTUG00000013377) TBC1D24 (ENSSTUG00000013367) ENSSTUG00000013352 ntn2 (ENSSTUG00000013299) ENSSTUG00000013274 ENSSTUG00000013212 CAPN15 (ENSSTUG00000013104) MSS51 (ENSSTUG00000013090) MSS51 (ENSSTUG00000013067) stub1 (ENSSTUG00000013052) crp2 (ENSSTUG00000013031) ##22 PRR35 (ENSSTUG00000013022) metrn (ENSSTUG00000013012) ENSSTUG00000012995 ENSSTUG00000012982 tmem204 (ENSSTUG00000012979) #19 IFT140 (ENSSTUG00000012679) #20 rab11fip3 (ENSSTUG00000012624) decr2 (ENSSTUG00000017763) RDH13 (ENSSTUG00000017747) SBK1 (ENSSTUG00000017737) ENSSTUG00000017734 ENSSTUG00000017722 NLRC3 (ENSSTUG00000017655) cluap1 (ENSSTUG00000017469) ENSSTUG00000017438 Salmoninae ANCESTRAL SPECIES 9 ENSGT00940000159856.c ENSGT00940000163984.B ENSGT00940000158312.e.a ENSGT00940000153820.b.b.a ENSGT00940000153820.b.b.b ENSGT00950000182933.B.a.a ENSGT00990000204060 ENSGT00930000151045.f.c ENSGT01100000263515.a.b.a.b.a.h.e ##22 ENSGT00530000063870.b.c ENSGT00390000001390.b.c ENSGT00390000013678 ENSGT00390000015528.b #19 ENSGT00940000153417.A #20 ENSGT00930000151045.f.d ENSGT01100000263515.a.b.a.b.a.h.f ##22 ENSGT00530000063870.b.d ENSGT00550000074847.l ENSGT00390000001390.b.d ENSGT00390000015528.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00940000158109.b ENSGT00810000125570.c ENSGT00940000160651.b ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 Huchen MODERN SPECIES 1401 CAPN15 (ENSHHUG00000043275) MSS51 (ENSHHUG00000043285) MSS51 (ENSHHUG00000043289) stub1 (ENSHHUG00000043293) crp2 (ENSHHUG00000043296) ##22 PRR35 (ENSHHUG00000043306) metrn (ENSHHUG00000043313) ENSHHUG00000043317 ENSHHUG00000043320 Salmoninae_a ANCESTRAL SPECIES 86 ENSGT00930000151045.f.d ENSGT01100000263515.a.b.a.b.a.h.f ##22 ENSGT00530000063870.b.d ENSGT00550000074847.l ENSGT00390000001390.b.d ENSGT00390000015528.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00940000158109.b ENSGT00810000125570.c ENSGT00940000160651.b ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 Oncorhynchus ANCESTRAL SPECIES 23 ENSGT00930000151045.f.d ENSGT01100000263515.a.b.a.b.a.h.f ##22 ENSGT00530000063870.b.d ENSGT01000000220624 ENSGT00390000001390.b.d ENSGT00390000015528.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00390000014900.b.b.b.b.b.a ENSGT00940000161341.a.a.e ENSGT00940000166248.a.c ENSGT00390000016335.h.h ENSGT00950000183098.a.b.d ENSGT00950000183150.a.a.b.e ENSGT00950000183150.a.a.a.c.c ENSGT00940000163448.a Oncorhynchus_a ANCESTRAL SPECIES 18 ENSGT01100000263515.a.b.a.b.a.h.f ##22 ENSGT00530000063870.b.d ENSGT01000000220624 ENSGT00390000001390.b.d ENSGT00390000015528.a #19 ENSGT00390000006698 #21 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00390000014900.b.b.b.b.b.a ENSGT00940000161341.a.a.e ENSGT00940000166248.a.c ENSGT00390000016335.h.h ENSGT00950000183098.a.b.d ENSGT00950000183150.a.a.b.e ENSGT00950000183150.a.a.a.c.c ENSGT00940000163448.a Chinook salmon MODERN SPECIES 17 MSL1 (ENSOTSG00005046244) chmp2a (ENSOTSG00005046243) ENSOTSG00005046242 SRCAP (ENSOTSG00005046215) stx4 (ENSOTSG00005046214) ARHGAP44 (ENSOTSG00005046183) ndel1a (ENSOTSG00005046162) chad (ENSOTSG00005046155) SLC16A5 (ENSOTSG00005046152) kctd2 (ENSOTSG00005046149) tubgcp2 (ENSOTSG00005046119) ENSOTSG00005046112 chuk (ENSOTSG00005045341) ENSOTSG00005045009 ENSOTSG00005045005 ENSOTSG00005045004 ##22 ENSOTSG00005045003 SBK1 (ENSOTSG00005045002) ENSOTSG00005045001 h1-0 (ENSOTSG00005045000) rhbdl1 (ENSOTSG00005044999) ENSOTSG00005044998 wdr24 (ENSOTSG00005044997) ENSOTSG00005044996 ENSOTSG00005044995 pdpk1b (ENSOTSG00005044872) ENSOTSG00005044863 ENSOTSG00005044860 #30 RNF40 (ENSOTSG00005044659) ENSOTSG00005044654 SLC17A7 (ENSOTSG00005044162) Coho salmon MODERN SPECIES 17 ENSOKIG00005012167 SRCIN1 (ENSOKIG00005012022) FMNL1 (ENSOKIG00005011905) ptges3l (ENSOKIG00005011849) G6PC1 (ENSOKIG00005011821) g6pc1a.1 (ENSOKIG00005011815) psme3 (ENSOKIG00005011203) ENSOKIG00005011169 nbr1a (ENSOKIG00005011143) tmem106a (ENSOKIG00005011125) arl4d (ENSOKIG00005011109) ENSOKIG00005011080 ACLY (ENSOKIG00005010950) ENSOKIG00005009960 ENSOKIG00005009887 ENSOKIG00005009872 ##22 PRR35 (ENSOKIG00005009862) ENSOKIG00005009840 metrn (ENSOKIG00005009833) tmem204 (ENSOKIG00005009827) #19 telo2 (ENSOKIG00005009673) #21 rab11fip3 (ENSOKIG00005009631) decr2 (ENSOKIG00005009551) ENSOKIG00005009534 ENSOKIG00005009527 PSD (ENSOKIG00005009349) CHUK (ENSOKIG00005009076) ENSOKIG00005008950 TUBGCP2 (ENSOKIG00005008526) kctd2 (ENSOKIG00005008449) SLC16A5 (ENSOKIG00005008428) Rainbow trout MODERN SPECIES 12 ENSOMYG00000055737 ENSOMYG00000049914 ENSOMYG00000070237 ENSOMYG00000051060 ENSOMYG00000058944 ENSOMYG00000049029 ENSOMYG00000059719 ENSOMYG00000064955 ENSOMYG00000061017 ENSOMYG00000055943 ENSOMYG00000075522 ENSOMYG00000071103 ENSOMYG00000053325 ENSOMYG00000063876 ENSOMYG00000013502 ENSOMYG00000013491 ##22 ENSOMYG00000013484 ENSOMYG00000013480 tmem204 (ENSOMYG00000013475) #19 ENSOMYG00000067717 ENSOMYG00000013425 #21 ENSOMYG00000058398 rab11fip3 (ENSOMYG00000013332) ENSOMYG00000013295 arl4d (ENSOMYG00000013277) tmem106a (ENSOMYG00000013257) ENSOMYG00000013270 nbr1a (ENSOMYG00000013239) psme3 (ENSOMYG00000013045) ENSOMYG00000062125 ENSOMYG00000012999 Salmo ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.a.h.f ##22 Atlantic salmon MODERN SPECIES 10 mfsd1l (ENSSSAG00000061088) ENSSSAG00000061065 #13 ENSSSAG00000112679 ##12 nubp2 (ENSSSAG00000060562) #11 ATP6V0C (ENSSSAG00000060426) tbc1d24 (ENSSSAG00000060392) ENSSSAG00000060080 ntn2 (ENSSSAG00000059986) ENSSSAG00000115568 ENSSSAG00000059934 ENSSSAG00000059658 ENSSSAG00000059640 ENSSSAG00000113661 ENSSSAG00000059608 stub1 (ENSSSAG00000059578) crp2 (ENSSSAG00000059541) ##22 ENSSSAG00000059527 metrn (ENSSSAG00000059509) ENSSSAG00000105703 ENSSSAG00000081977 ift140 (ENSSSAG00000059163) #20 ENSSSAG00000095462 decr2 (ENSSSAG00000059098) ENSSSAG00000059050 ENSSSAG00000059039 ENSSSAG00000098520 ENSSSAG00000096530 ENSSSAG00000058984 ENSSSAG00000058667 cluap1 (ENSSSAG00000058582) ENSSSAG00000058535 Northern pike MODERN SPECIES 4 nubp2 (ENSELUG00000008677) #11 ATP6V0C (ENSELUG00000008702) TBC1D24 (ENSELUG00000008718) ENSELUG00000008750 ntn2 (ENSELUG00000008784) ENSELUG00000031211 ENSELUG00000008808 ENSELUG00000008905 CAPN15 (ENSELUG00000008954) MSS51 (ENSELUG00000008983) MSS51 (ENSELUG00000009033) ENSELUG00000027125 ENSELUG00000033384 stub1 (ENSELUG00000009069) ENSELUG00000009079 crp2 (ENSELUG00000009114) ##22 PRR35 (ENSELUG00000009134) metrn (ENSELUG00000009153) ENSELUG00000009169 ENSELUG00000009198 tmem204 (ENSELUG00000009216) #19 IFT140 (ENSELUG00000009274) #20 telo2 (ENSELUG00000009307) #21 rab11fip3 (ENSELUG00000009342) decr2 (ENSELUG00000009366) RDH13 (ENSELUG00000009388) SBK1 (ENSELUG00000009409) ENSELUG00000009445 NLRC3 (ENSELUG00000009506) cluap1 (ENSELUG00000001265) ENSELUG00000009571 Spotted gar MODERN SPECIES 651 CCP110 (ENSLOCG00000002807) vps35l (ENSLOCG00000002839) KNOP1 (ENSLOCG00000002872) iqck (ENSLOCG00000002880) gprc5bb (ENSLOCG00000002905) proza (ENSLOCG00000002920) GPR139 (ENSLOCG00000002954) ENSLOCG00000002969 tekt4 (ENSLOCG00000002981) sstr5 (ENSLOCG00000018093) zgc:77748 (ENSLOCG00000018094) PKD1 (ENSLOCG00000002998) TSC2 (ENSLOCG00000003041) NTHL1 (ENSLOCG00000003090) ENSLOCG00000003104 crp2 (ENSLOCG00000003113) ##22 PRR35 (ENSLOCG00000003132) ENSLOCG00000018095 metrn (ENSLOCG00000003142) antkmt (ENSLOCG00000003152) ENSLOCG00000003167 ENSLOCG00000018096 ENSLOCG00000018097 IFT140 (ENSLOCG00000003182) #20 tmem204 (ENSLOCG00000003210) #19 telo2 (ENSLOCG00000003226) #21 RAB11FIP3 (ENSLOCG00000003257) decr2 (ENSLOCG00000003276) nme4 (ENSLOCG00000003288) xpo6 (ENSLOCG00000003304) SBK1 (ENSLOCG00000003322) Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES ENSECRG00000002453 ENSECRG00000002423 ENSECRG00000002412 ENSECRG00000002402 ENSECRG00000002384 ENSECRG00000002374 ENSECRG00000002366 ENSECRG00000002351 ENSECRG00000002344 ENSECRG00000002328 ##22 ENSECRG00000002316 ##22 ENSECRG00000002289 ENSECRG00000002272 ENSECRG00000002247 ENSECRG00000002225 ENSECRG00000002199 ##22 ENSECRG00000002033 ENSECRG00000001948 ##22 ENSECRG00000001923 ENSECRG00000001901 ENSECRG00000001856 ENSECRG00000001871 ENSECRG00000001841 ENSECRG00000001797 ENSECRG00000001708 ENSECRG00000001675 ENSECRG00000001658 ENSECRG00000001643 ENSECRG00000001626 ENSECRG00000001617 ENSECRG00000001598 Reedfish MODERN SPECIES rab3ip (ENSECRG00000001539) ENSECRG00000001576 ENSECRG00000001598 ENSECRG00000001617 ENSECRG00000001626 ENSECRG00000001643 ENSECRG00000001658 ENSECRG00000001675 ENSECRG00000001708 ENSECRG00000001797 ENSECRG00000001841 ENSECRG00000001871 ENSECRG00000001856 ENSECRG00000001901 ENSECRG00000001923 ENSECRG00000001948 ##22 ENSECRG00000002033 ENSECRG00000002199 ##22 ENSECRG00000002225 ENSECRG00000002247 ENSECRG00000002272 ENSECRG00000002289 ENSECRG00000002316 ##22 ENSECRG00000002328 ##22 ENSECRG00000002344 ENSECRG00000002351 ENSECRG00000002366 ENSECRG00000002374 ENSECRG00000002384 ENSECRG00000002402 ENSECRG00000002412 Reedfish MODERN SPECIES ENSECRG00000001675 ENSECRG00000001708 ENSECRG00000001797 ENSECRG00000001841 ENSECRG00000001871 ENSECRG00000001856 ENSECRG00000001901 ENSECRG00000001923 ENSECRG00000001948 ##22 ENSECRG00000002033 ENSECRG00000002199 ##22 ENSECRG00000002225 ENSECRG00000002247 ENSECRG00000002272 ENSECRG00000002289 ENSECRG00000002316 ##22 ENSECRG00000002328 ##22 ENSECRG00000002344 ENSECRG00000002351 ENSECRG00000002366 ENSECRG00000002374 ENSECRG00000002384 ENSECRG00000002402 ENSECRG00000002412 ENSECRG00000002423 ENSECRG00000002453 ENSECRG00000002480 ENSECRG00000002494 ENSECRG00000002501 ENSECRG00000002515 ENSECRG00000002529 Reedfish MODERN SPECIES ENSECRG00000001708 ENSECRG00000001797 ENSECRG00000001841 ENSECRG00000001871 ENSECRG00000001856 ENSECRG00000001901 ENSECRG00000001923 ENSECRG00000001948 ##22 ENSECRG00000002033 ENSECRG00000002199 ##22 ENSECRG00000002225 ENSECRG00000002247 ENSECRG00000002272 ENSECRG00000002289 ENSECRG00000002316 ##22 ENSECRG00000002328 ##22 ENSECRG00000002344 ENSECRG00000002351 ENSECRG00000002366 ENSECRG00000002374 ENSECRG00000002384 ENSECRG00000002402 ENSECRG00000002412 ENSECRG00000002423 ENSECRG00000002453 ENSECRG00000002480 ENSECRG00000002494 ENSECRG00000002501 ENSECRG00000002515 ENSECRG00000002529 ENSECRG00000002541 Gnathostomata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b ##22 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 2332 ENSCMIG00000005739 ##22 ENSCMIG00000005734 Elephant shark MODERN SPECIES 1522 ENSCMIG00000019283 mc5ra (ENSCMIG00000019279) rnmt (ENSCMIG00000019277) LGI1 (ENSCMIG00000019274) fam210aa (ENSCMIG00000019273) ptpn2a (ENSCMIG00000019270) seh1l (ENSCMIG00000019260) ENSCMIG00000019255 ENSCMIG00000019254 ENSCMIG00000019252 ENSCMIG00000019250 ENSCMIG00000019248 ENSCMIG00000019247 pfas (ENSCMIG00000019223) ENSCMIG00000019193 ENSCMIG00000019192 ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b ##22 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 497 ENSLACG00000000720 ENSLACG00000002227 ENSLACG00000003787 ##22 IHH (ENSLACG00000004314) ENSLACG00000005543 GMPPA (ENSLACG00000007680) ENSLACG00000008333 ENSLACG00000009714 ENSLACG00000011881 ENSLACG00000013176 CHPF (ENSLACG00000013509) zgc:66484 (ENSLACG00000013970) FEV (ENSLACG00000014059) cryba2b (ENSLACG00000014306) CFAP65 (ENSLACG00000014696) mnx2b (ENSLACG00000015145) CNPPD1 (ENSLACG00000015508) ENSLACG00000015588 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 342 HSF5 (ENSLACG00000015426) hpda (ENSLACG00000015263) MTMR4 (ENSLACG00000014570) ENSLACG00000014293 ENSLACG00000013897 ABHD11 (ENSLACG00000013733) ENSLACG00000012518 ENSLACG00000012251 ENSLACG00000012004 orai2 (ENSLACG00000011817) SRRM3 (ENSLACG00000008008) HSPB1 (ENSLACG00000007283) YWHAG (ENSLACG00000005482) ENSLACG00000004521 ENSLACG00000001707 ##22 ENSLACG00000000202 ##22 Coelacanth MODERN SPECIES 342 RNF43 (ENSLACG00000016277) HSF5 (ENSLACG00000015426) hpda (ENSLACG00000015263) MTMR4 (ENSLACG00000014570) ENSLACG00000014293 ENSLACG00000013897 ABHD11 (ENSLACG00000013733) ENSLACG00000012518 ENSLACG00000012251 ENSLACG00000012004 orai2 (ENSLACG00000011817) SRRM3 (ENSLACG00000008008) HSPB1 (ENSLACG00000007283) YWHAG (ENSLACG00000005482) ENSLACG00000004521 ENSLACG00000001707 ##22 ENSLACG00000000202 ##22 Coelacanth MODERN SPECIES 2318 ENSLACG00000001622 ##22 ENSLACG00000002015 DTX4 (ENSLACG00000002462) PATL1 (ENSLACG00000004640) UBE2S (ENSLACG00000006481) ENSLACG00000007289 ENSLACG00000007774 TMEM238 (ENSLACG00000008530) ISOC2 (ENSLACG00000008580) Tetrapoda ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b ##22 Anura DUPLICATION Anura DUPLICATION Anura DUPLICATION Anura ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.e.a.a ##22 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 4 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 ENSLLEG00000026243 ENSLLEG00000026268 ENSLLEG00000026281 Leishan spiny toad MODERN SPECIES 4 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 ENSLLEG00000026243 ENSLLEG00000026268 ENSLLEG00000026281 ENSA (ENSLLEG00000026308) ADAMTSL4 (ENSLLEG00000026357) Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 ENSLLEG00000026243 ENSLLEG00000026268 ENSLLEG00000026281 ENSA (ENSLLEG00000026308) Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023357 ENSLLEG00000023375 ENSLLEG00000023443 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 ENSLLEG00000026243 ENSLLEG00000026268 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023375 ENSLLEG00000023443 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 4 RAB25 (ENSLLEG00000023071) ENSLLEG00000023357 ENSLLEG00000023375 ENSLLEG00000023443 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023443 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ##22 ENSLLEG00000024319 ##22 ENSLLEG00000024371 ##22 ENSLLEG00000024420 ##22 ENSLLEG00000024452 ##22 ENSLLEG00000024492 ##22 ENSLLEG00000024540 ##22 ENSLLEG00000024585 ##22 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 ENSLLEG00000025538 CTSS (ENSLLEG00000025617) GOLPH3L (ENSLLEG00000025739) ENSLLEG00000026186 ENSLLEG00000026212 ENSLLEG00000026228 ENSLLEG00000026243 Frog MODERN SPECIES 8 ENSXETG00000026666 anxa9 (ENSXETG00000031026) cers2 (ENSXETG00000038346) setdb1 (ENSXETG00000008936) ENSXETG00000045572 arnt (ENSXETG00000008942) ENSXETG00000047960 ENSXETG00000035861 ENSXETG00000037802 ENSXETG00000049438 ENSXETG00000045016 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000046147 ##22 ENSXETG00000045396 ENSXETG00000037685 crp.4 (ENSXETG00000027272) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 XB5886928 [provisional] (ENSXETG00000030596) ##22 ENSXETG00000045174 ENSXETG00000038688 ##22 ENSXETG00000047296 cadm3 (ENSXETG00000019353) ripk3l.1 (ENSXETG00000025849) ENSXETG00000049164 ENSXETG00000038971 ENSXETG00000043950 ENSXETG00000041721 ENSXETG00000041501 ENSXETG00000032334 ENSXETG00000014218 ENSXETG00000048253 Anura ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.e.a.b ##22 Frog MODERN SPECIES 8 anxa9 (ENSXETG00000031026) cers2 (ENSXETG00000038346) setdb1 (ENSXETG00000008936) ENSXETG00000045572 arnt (ENSXETG00000008942) ENSXETG00000047960 ENSXETG00000035861 ENSXETG00000037802 ENSXETG00000049438 ENSXETG00000045016 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000046147 ##22 ENSXETG00000045396 ENSXETG00000037685 crp.4 (ENSXETG00000027272) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 XB5886928 [provisional] (ENSXETG00000030596) ##22 ENSXETG00000045174 ENSXETG00000038688 ##22 ENSXETG00000047296 cadm3 (ENSXETG00000019353) ripk3l.1 (ENSXETG00000025849) ENSXETG00000049164 ENSXETG00000038971 ENSXETG00000043950 ENSXETG00000041721 ENSXETG00000041501 ENSXETG00000032334 ENSXETG00000014218 ENSXETG00000048253 ENSXETG00000031989 Anura ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.e.b ##22 Frog DUPLICATION Frog MODERN SPECIES 8 or2g3 (ENSXETG00000016366) ENSXETG00000031989 ENSXETG00000048253 ENSXETG00000014218 ENSXETG00000032334 ENSXETG00000041501 ENSXETG00000041721 ENSXETG00000043950 ENSXETG00000038971 ENSXETG00000049164 ripk3l.1 (ENSXETG00000025849) cadm3 (ENSXETG00000019353) ENSXETG00000047296 ENSXETG00000038688 ##22 ENSXETG00000045174 XB5886928 [provisional] (ENSXETG00000030596) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 crp.4 (ENSXETG00000027272) ##22 ENSXETG00000037685 ENSXETG00000045396 ENSXETG00000046147 ##22 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000045016 ENSXETG00000049438 ENSXETG00000037802 ENSXETG00000035861 ENSXETG00000047960 arnt (ENSXETG00000008942) ENSXETG00000045572 setdb1 (ENSXETG00000008936) cers2 (ENSXETG00000038346) Frog MODERN SPECIES 8 ENSXETG00000016367 ENSXETG00000041858 or2g3 (ENSXETG00000016366) ENSXETG00000031989 ENSXETG00000048253 ENSXETG00000014218 ENSXETG00000032334 ENSXETG00000041501 ENSXETG00000041721 ENSXETG00000043950 ENSXETG00000038971 ENSXETG00000049164 ripk3l.1 (ENSXETG00000025849) cadm3 (ENSXETG00000019353) ENSXETG00000047296 ENSXETG00000038688 ##22 ENSXETG00000045174 XB5886928 [provisional] (ENSXETG00000030596) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 crp.4 (ENSXETG00000027272) ##22 ENSXETG00000037685 ENSXETG00000045396 ENSXETG00000046147 ##22 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000045016 ENSXETG00000049438 ENSXETG00000037802 ENSXETG00000035861 ENSXETG00000047960 arnt (ENSXETG00000008942) ENSXETG00000045572 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000024967 HDGF (ENSLLEG00000025023) ENSLLEG00000025116 ##22 ENSLLEG00000025183 CADM3 (ENSLLEG00000025198) ENSLLEG00000025229 ENSLLEG00000025267 ENSLLEG00000025340 ENSLLEG00000025382 ENSLLEG00000025506 ENSLLEG00000025531 ENSLLEG00000025551 INSRR (ENSLLEG00000025682) ENSLLEG00000026120 ENSLLEG00000026435 NTRK1 (ENSLLEG00000026462) ENSLLEG00000026642 ENSLLEG00000026843 Anura ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.f ##22 Frog DUPLICATION Frog DUPLICATION Frog MODERN SPECIES 8 ENSXETG00000042457 ENSXETG00000044958 ENSXETG00000038666 XB5852327 [provisional] (ENSXETG00000038571) ENSXETG00000042000 ENSXETG00000040800 ENSXETG00000048720 ENSXETG00000047521 XB22063306 [provisional:btn1a1] (ENSXETG00000032062) tll2l (ENSXETG00000024379) ENSXETG00000039135 XB22063318 [provisional] (ENSXETG00000032094) znf397 (ENSXETG00000037326) itln1al (ENSXETG00000033677) apcs.2 (ENSXETG00000024904) ##22 crp.2 (ENSXETG00000037720) ##22 ENSXETG00000035013 astl3a.1 (ENSXETG00000043597) astl3a.3 (ENSXETG00000042212) ENSXETG00000043066 ENSXETG00000045474 atg2b (ENSXETG00000024385) ENSXETG00000044872 astl3c (ENSXETG00000033020) ENSXETG00000049428 t2r9 (ENSXETG00000030421) t2r4 (ENSXETG00000034275) bchel (ENSXETG00000031068) ENSXETG00000038089 ENSXETG00000048282 ENSXETG00000030806 Frog MODERN SPECIES 8 ENSXETG00000033243 ENSXETG00000042457 ENSXETG00000044958 ENSXETG00000038666 XB5852327 [provisional] (ENSXETG00000038571) ENSXETG00000042000 ENSXETG00000040800 ENSXETG00000048720 ENSXETG00000047521 XB22063306 [provisional:btn1a1] (ENSXETG00000032062) tll2l (ENSXETG00000024379) ENSXETG00000039135 XB22063318 [provisional] (ENSXETG00000032094) znf397 (ENSXETG00000037326) itln1al (ENSXETG00000033677) apcs.2 (ENSXETG00000024904) ##22 crp.2 (ENSXETG00000037720) ##22 ENSXETG00000035013 astl3a.1 (ENSXETG00000043597) astl3a.3 (ENSXETG00000042212) ENSXETG00000043066 ENSXETG00000045474 atg2b (ENSXETG00000024385) ENSXETG00000044872 astl3c (ENSXETG00000033020) ENSXETG00000049428 t2r9 (ENSXETG00000030421) t2r4 (ENSXETG00000034275) bchel (ENSXETG00000031068) ENSXETG00000038089 ENSXETG00000048282 Frog DUPLICATION Frog MODERN SPECIES 8 XB986811 [provisional:ctsk] (ENSXETG00000008916) ENSXETG00000048153 ctsk (ENSXETG00000035558) ENSXETG00000035955 ENSXETG00000026666 anxa9 (ENSXETG00000031026) cers2 (ENSXETG00000038346) setdb1 (ENSXETG00000008936) ENSXETG00000045572 arnt (ENSXETG00000008942) ENSXETG00000047960 ENSXETG00000035861 ENSXETG00000037802 ENSXETG00000049438 ENSXETG00000045016 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000046147 ##22 ENSXETG00000045396 ENSXETG00000037685 crp.4 (ENSXETG00000027272) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 XB5886928 [provisional] (ENSXETG00000030596) ##22 ENSXETG00000045174 ENSXETG00000038688 ##22 ENSXETG00000047296 cadm3 (ENSXETG00000019353) ripk3l.1 (ENSXETG00000025849) ENSXETG00000049164 ENSXETG00000038971 ENSXETG00000043950 ENSXETG00000041721 Frog MODERN SPECIES 8 ENSXETG00000048153 ctsk (ENSXETG00000035558) ENSXETG00000035955 ENSXETG00000026666 anxa9 (ENSXETG00000031026) cers2 (ENSXETG00000038346) setdb1 (ENSXETG00000008936) ENSXETG00000045572 arnt (ENSXETG00000008942) ENSXETG00000047960 ENSXETG00000035861 ENSXETG00000037802 ENSXETG00000049438 ENSXETG00000045016 crp.1 (ENSXETG00000003976) ##22 ENSXETG00000046147 ##22 ENSXETG00000045396 ENSXETG00000037685 crp.4 (ENSXETG00000027272) ##22 XB5856184 [provisional:crp] (ENSXETG00000046752) ##22 XB5886928 [provisional] (ENSXETG00000030596) ##22 ENSXETG00000045174 ENSXETG00000038688 ##22 ENSXETG00000047296 cadm3 (ENSXETG00000019353) ripk3l.1 (ENSXETG00000025849) ENSXETG00000049164 ENSXETG00000038971 ENSXETG00000043950 ENSXETG00000041721 ENSXETG00000041501 Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Sauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Episquamata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Toxicofera ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000162660.b.e.b.b ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m ENSGT00940000154196.a Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m ENSGT00940000154196.a ENSGT00390000014903 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m ENSGT00940000154196.a ENSGT00390000014903 Mainland tiger snake MODERN SPECIES 477 ENSNSUG00000002771 ##22 ENSNSUG00000002772 ##22 ENSNSUG00000002773 ##22 ENSNSUG00000002777 CADM3 (ENSNSUG00000002778) Eastern brown snake MODERN SPECIES 85 STIP1 (ENSPTXG00000009898) NAA40 (ENSPTXG00000009899) RCOR2 (ENSPTXG00000009902) MARK2 (ENSPTXG00000009903) ENSPTXG00000009905 ENSPTXG00000009906 ZFTA (ENSPTXG00000009907) ENSPTXG00000009908 ENSPTXG00000009909 ENSPTXG00000010078 ENSPTXG00000010079 ENSPTXG00000010080 OR6K3 (ENSPTXG00000010082) CADM3 (ENSPTXG00000010083) ENSPTXG00000010085 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010089 ##22 ENSPTXG00000010091 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010112 CFAP45 (ENSPTXG00000010113) SLAMF8 (ENSPTXG00000010114) SYVN1 (ENSPTXG00000010116) SPDYC (ENSPTXG00000010117) CAPN1 (ENSPTXG00000010118) ENSPTXG00000010119 ##22 CDC42EP2 (ENSPTXG00000010120) DPF2 (ENSPTXG00000010121) ENSPTXG00000010123 Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Indian cobra MODERN SPECIES 17 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ##22 ENSNNAG00000007266 ##22 ENSNNAG00000007287 ##22 ENSNNAG00000007337 ##22 ENSNNAG00000007363 ##22 CADM3 (ENSNNAG00000007377) OR6K2 (ENSNNAG00000007406) ENSNNAG00000007424 ENSNNAG00000007458 ENSNNAG00000007486 ENSNNAG00000007507 ATL3 (ENSNNAG00000007517) ENSNNAG00000007579 ZFTA (ENSNNAG00000007620) ENSNNAG00000007705 ENSNNAG00000007754 ENSNNAG00000007791 RCOR2 (ENSNNAG00000007816) NAA40 (ENSNNAG00000007914) OTUB1 (ENSNNAG00000007945) Laterata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.a ##22 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015045 CAPN1 (ENSPMRG00000015032) ENSPMRG00000015024 SPDYC (ENSPMRG00000015019) SYVN1 (ENSPMRG00000014978) ENSPMRG00000014969 ENSPMRG00000014961 ENSPMRG00000018482 CFAP45 (ENSPMRG00000018455) TAGLN2 (ENSPMRG00000018431) IGSF9 (ENSPMRG00000018405) ENSPMRG00000018394 DUSP23 (ENSPMRG00000018389) ENSPMRG00000018383 ##22 ENSPMRG00000018379 ##22 ENSPMRG00000018374 ##22 ENSPMRG00000018370 ##22 ENSPMRG00000018368 ##22 ACKR1 (ENSPMRG00000018360) CADM3 (ENSPMRG00000018343) OR6N2 (ENSPMRG00000018328) OR6N1 (ENSPMRG00000018321) ENSPMRG00000018306 ENSPMRG00000018293 ATL3 (ENSPMRG00000018282) ENSPMRG00000018274 ZFTA (ENSPMRG00000018267) ENSPMRG00000018261 ENSPMRG00000018257 MARK2 (ENSPMRG00000018128) RCOR2 (ENSPMRG00000018078) Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Mammalia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Theria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Eutheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Ursidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Giant Panda MODERN SPECIES 1758 ENSAMEG00000027515 ##22 Sauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Episquamata ANCESTRAL SPECIES 79 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Laterata ANCESTRAL SPECIES 25 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031 ENSGT00940000154196.a Common wall lizard MODERN SPECIES 7 SF3B2 (ENSPMRG00000015057) ENSPMRG00000015050 ENSPMRG00000015045 CAPN1 (ENSPMRG00000015032) ENSPMRG00000015024 SPDYC (ENSPMRG00000015019) SYVN1 (ENSPMRG00000014978) ENSPMRG00000014969 ENSPMRG00000014961 ENSPMRG00000018482 CFAP45 (ENSPMRG00000018455) TAGLN2 (ENSPMRG00000018431) IGSF9 (ENSPMRG00000018405) ENSPMRG00000018394 DUSP23 (ENSPMRG00000018389) ENSPMRG00000018383 ##22 ENSPMRG00000018379 ##22 ENSPMRG00000018374 ##22 ENSPMRG00000018370 ##22 ENSPMRG00000018368 ##22 ACKR1 (ENSPMRG00000018360) CADM3 (ENSPMRG00000018343) OR6N2 (ENSPMRG00000018328) OR6N1 (ENSPMRG00000018321) ENSPMRG00000018306 ENSPMRG00000018293 ATL3 (ENSPMRG00000018282) ENSPMRG00000018274 ZFTA (ENSPMRG00000018267) ENSPMRG00000018261 ENSPMRG00000018257 Argentine black and white tegu MODERN SPECIES 80 PRUNE1 (ENSSMRG00000021226) BNIPL (ENSSMRG00000021224) CDC42SE1 (ENSSMRG00000021222) ENSSMRG00000021221 GABPB2 (ENSSMRG00000021219) ENSSMRG00000021217 SEMA6C (ENSSMRG00000021205) ENSSMRG00000021202 ENSSMRG00000021199 ENSSMRG00000021197 CFAP45 (ENSSMRG00000021196) TAGLN2 (ENSSMRG00000021195) IGSF9 (ENSSMRG00000021194) DUSP23 (ENSSMRG00000021193) ENSSMRG00000021192 ##22 ENSSMRG00000021191 ##22 ENSSMRG00000021190 ##22 ENSSMRG00000021188 CAPN1 (ENSSMRG00000021187) SPDYC (ENSSMRG00000021186) SYVN1 (ENSSMRG00000021185) ENSSMRG00000021184 EHBP1L1 (ENSSMRG00000021183) ENSSMRG00000021182 MAP3K11 (ENSSMRG00000021181) PCNX3 (ENSSMRG00000021180) SIPA1 (ENSSMRG00000021179) LTBP3 (ENSSMRG00000021178) MEN1 (ENSSMRG00000021177) EHD1 (ENSSMRG00000021176) ATG2A (ENSSMRG00000021175) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000162660.b.e.a ENSGT00940000154853 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031 ENSGT00940000154196.a Lizard DUPLICATION Lizard DUPLICATION Lizard MODERN SPECIES 1246 ENSACAG00000043681 ##22 ENSACAG00000035850 ENSACAG00000040472 ##22 ENSACAG00000014949 PEAR1 (ENSACAG00000015085) INSRR (ENSACAG00000015162) MRPL24 (ENSACAG00000015408) METTL25B (ENSACAG00000015424) ISG20L2 (ENSACAG00000015444) CRABP2 (ENSACAG00000015454) ENSACAG00000022201 Lizard MODERN SPECIES 1246 ENSACAG00000043681 ##22 ENSACAG00000035850 ENSACAG00000040472 ##22 ENSACAG00000014949 PEAR1 (ENSACAG00000015085) INSRR (ENSACAG00000015162) MRPL24 (ENSACAG00000015408) METTL25B (ENSACAG00000015424) ISG20L2 (ENSACAG00000015444) CRABP2 (ENSACAG00000015454) ENSACAG00000022201 Lizard MODERN SPECIES 1701 ENSACAG00000045138 ENSACAG00000010101 ENSACAG00000010098 ##22 ENSACAG00000010060 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 27 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000162660.b.e.b.b ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 Indian cobra MODERN SPECIES 17 ENSNNAG00000005756 ENSNNAG00000006165 ENSNNAG00000006513 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ##22 ENSNNAG00000007266 ##22 ENSNNAG00000007287 ##22 ENSNNAG00000007337 ##22 ENSNNAG00000007363 ##22 CADM3 (ENSNNAG00000007377) OR6K2 (ENSNNAG00000007406) ENSNNAG00000007424 ENSNNAG00000007458 ENSNNAG00000007486 ENSNNAG00000007507 ATL3 (ENSNNAG00000007517) ENSNNAG00000007579 ZFTA (ENSNNAG00000007620) ENSNNAG00000007705 ENSNNAG00000007754 ENSNNAG00000007791 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000154901.C.b.f.b.b.b ENSGT00940000154901.C.b.f.b.a.b ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 Mainland tiger snake MODERN SPECIES 602 CFAP45 (ENSNSUG00000002542) TAGLN2 (ENSNSUG00000002543) IGSF9 (ENSNSUG00000002544) DUSP23 (ENSNSUG00000002545) ENSNSUG00000002546 ##22 ENSNSUG00000002547 ##22 ENSNSUG00000002548 ##22 Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010225 ENSPTXG00000010206 ENSPTXG00000010123 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 ##22 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010085 ##22 CADM3 (ENSPTXG00000010083) OR6K3 (ENSPTXG00000010082) ENSPTXG00000010080 ENSPTXG00000010079 ENSPTXG00000010078 ENSPTXG00000009909 ENSPTXG00000009908 ZFTA (ENSPTXG00000009907) ENSPTXG00000009906 ENSPTXG00000009905 MARK2 (ENSPTXG00000009903) RCOR2 (ENSPTXG00000009902) Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Elapidae ANCESTRAL SPECIES 27 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000162660.b.e.b.b ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000154901.C.b.f.b.a.b ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010206 ENSPTXG00000010123 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 ##22 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010085 ##22 CADM3 (ENSPTXG00000010083) OR6K3 (ENSPTXG00000010082) ENSPTXG00000010080 ENSPTXG00000010079 ENSPTXG00000010078 ENSPTXG00000009909 ENSPTXG00000009908 ZFTA (ENSPTXG00000009907) ENSPTXG00000009906 ENSPTXG00000009905 MARK2 (ENSPTXG00000009903) RCOR2 (ENSPTXG00000009902) NAA40 (ENSPTXG00000009899) Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Indian cobra MODERN SPECIES 17 ENSNNAG00000006513 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ##22 ENSNNAG00000007266 ##22 ENSNNAG00000007287 ##22 ENSNNAG00000007337 ##22 ENSNNAG00000007363 ##22 CADM3 (ENSNNAG00000007377) OR6K2 (ENSNNAG00000007406) ENSNNAG00000007424 ENSNNAG00000007458 ENSNNAG00000007486 ENSNNAG00000007507 ATL3 (ENSNNAG00000007517) ENSNNAG00000007579 ZFTA (ENSNNAG00000007620) ENSNNAG00000007705 ENSNNAG00000007754 ENSNNAG00000007791 RCOR2 (ENSNNAG00000007816) NAA40 (ENSNNAG00000007914) Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 Elapidae_a ANCESTRAL SPECIES 43 ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m Mainland tiger snake MODERN SPECIES 477 ENSNSUG00000002771 ##22 ENSNSUG00000002772 ##22 ENSNSUG00000002773 ##22 ENSNSUG00000002777 CADM3 (ENSNSUG00000002778) Elapidae ANCESTRAL SPECIES 27 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000162660.b.e.b.b ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m Indian cobra MODERN SPECIES 17 ENSNNAG00000006165 ENSNNAG00000006513 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ##22 ENSNNAG00000007266 ##22 ENSNNAG00000007287 ##22 ENSNNAG00000007337 ##22 ENSNNAG00000007363 ##22 CADM3 (ENSNNAG00000007377) OR6K2 (ENSNNAG00000007406) ENSNNAG00000007424 ENSNNAG00000007458 ENSNNAG00000007486 ENSNNAG00000007507 ATL3 (ENSNNAG00000007517) ENSNNAG00000007579 ZFTA (ENSNNAG00000007620) ENSNNAG00000007705 ENSNNAG00000007754 ENSNNAG00000007791 RCOR2 (ENSNNAG00000007816) Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m ENSGT00940000154196.a Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031.m ENSGT00940000154196.a Mainland tiger snake MODERN SPECIES 477 ENSNSUG00000002771 ##22 ENSNSUG00000002772 ##22 ENSNSUG00000002773 ##22 ENSNSUG00000002777 CADM3 (ENSNSUG00000002778) Amniota ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 Sauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 Episquamata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 Laterata ANCESTRAL SPECIES 25 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015050 ENSPMRG00000015045 CAPN1 (ENSPMRG00000015032) ENSPMRG00000015024 SPDYC (ENSPMRG00000015019) SYVN1 (ENSPMRG00000014978) ENSPMRG00000014969 ENSPMRG00000014961 ENSPMRG00000018482 CFAP45 (ENSPMRG00000018455) TAGLN2 (ENSPMRG00000018431) IGSF9 (ENSPMRG00000018405) ENSPMRG00000018394 DUSP23 (ENSPMRG00000018389) ENSPMRG00000018383 ##22 ENSPMRG00000018379 ##22 ENSPMRG00000018374 ##22 ENSPMRG00000018370 ##22 ENSPMRG00000018368 ##22 ACKR1 (ENSPMRG00000018360) CADM3 (ENSPMRG00000018343) OR6N2 (ENSPMRG00000018328) OR6N1 (ENSPMRG00000018321) ENSPMRG00000018306 ENSPMRG00000018293 ATL3 (ENSPMRG00000018282) ENSPMRG00000018274 ZFTA (ENSPMRG00000018267) ENSPMRG00000018261 ENSPMRG00000018257 MARK2 (ENSPMRG00000018128) Argentine black and white tegu MODERN SPECIES 80 BNIPL (ENSSMRG00000021224) CDC42SE1 (ENSSMRG00000021222) ENSSMRG00000021221 GABPB2 (ENSSMRG00000021219) ENSSMRG00000021217 SEMA6C (ENSSMRG00000021205) ENSSMRG00000021202 ENSSMRG00000021199 ENSSMRG00000021197 CFAP45 (ENSSMRG00000021196) TAGLN2 (ENSSMRG00000021195) IGSF9 (ENSSMRG00000021194) DUSP23 (ENSSMRG00000021193) ENSSMRG00000021192 ##22 ENSSMRG00000021191 ##22 ENSSMRG00000021190 ##22 ENSSMRG00000021188 CAPN1 (ENSSMRG00000021187) SPDYC (ENSSMRG00000021186) SYVN1 (ENSSMRG00000021185) ENSSMRG00000021184 EHBP1L1 (ENSSMRG00000021183) ENSSMRG00000021182 MAP3K11 (ENSSMRG00000021181) PCNX3 (ENSSMRG00000021180) SIPA1 (ENSSMRG00000021179) LTBP3 (ENSSMRG00000021178) MEN1 (ENSSMRG00000021177) EHD1 (ENSSMRG00000021176) ATG2A (ENSSMRG00000021175) PPP2R5B (ENSSMRG00000020394) Amniota ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Sauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Episquamata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Toxicofera ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Elapidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Elapidae_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Mainland tiger snake MODERN SPECIES 602 CFAP45 (ENSNSUG00000002542) TAGLN2 (ENSNSUG00000002543) IGSF9 (ENSNSUG00000002544) DUSP23 (ENSNSUG00000002545) ENSNSUG00000002546 ##22 ENSNSUG00000002547 ##22 ENSNSUG00000002548 ##22 Eastern brown snake MODERN SPECIES 85 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 ##22 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010085 ##22 CADM3 (ENSPTXG00000010083) OR6K3 (ENSPTXG00000010082) ENSPTXG00000010080 ENSPTXG00000010079 ENSPTXG00000010078 ENSPTXG00000009909 ENSPTXG00000009908 ZFTA (ENSPTXG00000009907) ENSPTXG00000009906 ENSPTXG00000009905 MARK2 (ENSPTXG00000009903) RCOR2 (ENSPTXG00000009902) NAA40 (ENSPTXG00000009899) STIP1 (ENSPTXG00000009898) FERMT3 (ENSPTXG00000009894) Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Laterata ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Common wall lizard MODERN SPECIES 7 NAA40 (ENSPMRG00000018070) RCOR2 (ENSPMRG00000018078) MARK2 (ENSPMRG00000018128) ENSPMRG00000018257 ENSPMRG00000018261 ZFTA (ENSPMRG00000018267) ENSPMRG00000018274 ATL3 (ENSPMRG00000018282) ENSPMRG00000018293 ENSPMRG00000018306 OR6N1 (ENSPMRG00000018321) OR6N2 (ENSPMRG00000018328) CADM3 (ENSPMRG00000018343) ACKR1 (ENSPMRG00000018360) ENSPMRG00000018368 ##22 ENSPMRG00000018370 ##22 ENSPMRG00000018374 ##22 ENSPMRG00000018379 ##22 ENSPMRG00000018383 ##22 DUSP23 (ENSPMRG00000018389) ENSPMRG00000018394 IGSF9 (ENSPMRG00000018405) TAGLN2 (ENSPMRG00000018431) CFAP45 (ENSPMRG00000018455) ENSPMRG00000018482 ENSPMRG00000014961 ENSPMRG00000014969 SYVN1 (ENSPMRG00000014978) SPDYC (ENSPMRG00000015019) ENSPMRG00000015024 CAPN1 (ENSPMRG00000015032) Mammalia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Theria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Eutheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Carnivora ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Caniformia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Ursidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.g.b.b ##22 Giant Panda MODERN SPECIES 1679 ENSAMEG00000024676 ##22 Amniota ANCESTRAL SPECIES 55 ENSGT00940000158549 ENSGT00390000008744 ENSGT00940000155545.a ENSGT00390000008196 ENSGT00390000003308.b ENSGT00940000160641 ENSGT00530000064299 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000158895.c.a ENSGT00940000158895.c.b Mammalia ANCESTRAL SPECIES 175 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h ##22 ENSGT01050000244808.A.b.a Theria DUPLICATION Theria DUPLICATION Theria ANCESTRAL SPECIES 3 ENSGT01050000244808.D.fb.b.a.a.a.a ENSGT00940000155795 ENSGT01100000263475.d.a ENSGT00940000164107 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908 ENSGT00390000013296 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000165113 ENSGT00940000163973 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 Marsupialia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164179.a.b ENSGT00940000164179.a.a Diprotodontia ANCESTRAL SPECIES 30 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164179.a.b ENSGT00940000164179.a.a Diprotodontia_a ANCESTRAL SPECIES 28 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.fb.b.a.a.a.b ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B.y ENSGT00940000159272.B.z ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870.j ENSGT00940000162870.i ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164179.a.b Common wonbat MODERN SPECIES 1070 IGSF8 (ENSVURG00010002261) KCNJ9 (ENSVURG00010002274) KCNJ10 (ENSVURG00010002293) PIGM (ENSVURG00010002300) ENSVURG00010002305 IGSF9 (ENSVURG00010002314) TAGLN2 (ENSVURG00010002337) CFAP45 (ENSVURG00010002351) VSIG8 (ENSVURG00010002373) SLAMF8 (ENSVURG00010002381) ENSVURG00010002392 DUSP23 (ENSVURG00010002433) CRP (ENSVURG00010002451) ##22 ENSVURG00010002472 ENSVURG00010002492 ENSVURG00010002501 ##22 OR10J1 (ENSVURG00010002506) OR10J4 (ENSVURG00010002513) ENSVURG00010002517 ENSVURG00010002521 ENSVURG00010002530 ENSVURG00010002535 ENSVURG00010002551 ENSVURG00010002561 ##22 ENSVURG00010002567 ##22 ENSVURG00010002572 ENSVURG00010002577 CADM3 (ENSVURG00010002602) ENSVURG00010002641 ENSVURG00010002659 ENSVURG00010002667 koala MODERN SPECIES 321 TAGLN2 (ENSPCIG00000027101) CFAP45 (ENSPCIG00000027096) VSIG8 (ENSPCIG00000027092) SLAMF8 (ENSPCIG00000027089) ENSPCIG00000027083 DUSP23 (ENSPCIG00000027081) CRP (ENSPCIG00000017685) ##22 ENSPCIG00000027076 ENSPCIG00000027074 ENSPCIG00000027073 ##22 OR10J4 (ENSPCIG00000027072) ENSPCIG00000034011 ENSPCIG00000023551 ENSPCIG00000000808 ENSPCIG00000000797 CADM3 (ENSPCIG00000000771) ENSPCIG00000000741 OR6N2 (ENSPCIG00000000726) OR6N1 (ENSPCIG00000000718) OR6K6 (ENSPCIG00000000697) ENSPCIG00000034726 ENSPCIG00000000639 OR6K2 (ENSPCIG00000000571) ENSPCIG00000000460 SPTA1 (ENSPCIG00000001424) Tasmanian devil MODERN SPECIES 3 ATP1A4 (ENSSHAG00000029666) ENSSHAG00000009196 IGSF8 (ENSSHAG00000009735) ENSSHAG00000028824 PIGM (ENSSHAG00000025008) ENSSHAG00000028223 ENSSHAG00000010826 IGSF9 (ENSSHAG00000011017) TAGLN2 (ENSSHAG00000021986) CFAP45 (ENSSHAG00000011462) VSIG8 (ENSSHAG00000011914) SLAMF8 (ENSSHAG00000012172) ENSSHAG00000030943 ENSSHAG00000032205 CRP (ENSSHAG00000032180) ##22 ENSSHAG00000024036 ##22 OR10J1 (ENSSHAG00000002709) OR10J4 (ENSSHAG00000030278) ENSSHAG00000001073 OR10J3 (ENSSHAG00000000674) ENSSHAG00000000029 ENSSHAG00000001432 ENSSHAG00000026175 ENSSHAG00000005599 OR6N2 (ENSSHAG00000007579) OR6N1 (ENSSHAG00000007790) OR6K6 (ENSSHAG00000008099) ENSSHAG00000008771 ENSSHAG00000020733 ENSSHAG00000030433 ENSSHAG00000009498 Opossum MODERN SPECIES 1 ENSMODG00000010260 OR6K6 (ENSMODG00000010249) OR6N1 (ENSMODG00000010206) ENSMODG00000010169 ENSMODG00000027491 CADM3 (ENSMODG00000010160) ENSMODG00000042514 ENSMODG00000048715 ##22 ENSMODG00000045089 ##22 ENSMODG00000010060 ENSMODG00000010143 OR10J3 (ENSMODG00000010132) ENSMODG00000044389 OR10J4 (ENSMODG00000042252) OR10J1 (ENSMODG00000049391) APCS (ENSMODG00000038936) ##22 ENSMODG00000041605 ENSMODG00000037938 ENSMODG00000010057 DUSP23 (ENSMODG00000010053) SLAMF8 (ENSMODG00000010050) VSIG8 (ENSMODG00000010046) CFAP45 (ENSMODG00000010039) TAGLN2 (ENSMODG00000048991) IGSF9 (ENSMODG00000010024) ENSMODG00000010009 PIGM (ENSMODG00000009991) KCNJ10 (ENSMODG00000024584) KCNJ9 (ENSMODG00000009988) ENSMODG00000009976 ATP1A2 (ENSMODG00000009958) Eutheria ANCESTRAL SPECIES ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Atlantogenata ANCESTRAL SPECIES 15 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000164490 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Afrotheria ANCESTRAL SPECIES 87 ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b Afrotheria_a ANCESTRAL SPECIES 89 ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b Elephant MODERN SPECIES 325 OR10Z1 (ENSLAFG00000012067) SPTA1 (ENSLAFG00000012069) OR6K2 (ENSLAFG00000012080) ENSLAFG00000032144 ENSLAFG00000006379 ENSLAFG00000030218 ENSLAFG00000011251 ENSLAFG00000021649 OR6N1 (ENSLAFG00000014379) OR6N2 (ENSLAFG00000011136) ENSLAFG00000032373 ENSLAFG00000001038 MNDA (ENSLAFG00000002774) CADM3 (ENSLAFG00000005683) ACKR1 (ENSLAFG00000031828) ENSLAFG00000020848 ##22 FCER1A (ENSLAFG00000004222) ENSLAFG00000030660 ENSLAFG00000025733 ENSLAFG00000031436 OR10J1 (ENSLAFG00000014770) OR10J5 (ENSLAFG00000021971) APCS (ENSLAFG00000030778) ##22 CRP (ENSLAFG00000029698) ##22 DUSP23 (ENSLAFG00000014105) ENSLAFG00000026692 SLAMF8 (ENSLAFG00000001163) VSIG8 (ENSLAFG00000007599) CFAP45 (ENSLAFG00000004137) TAGLN2 (ENSLAFG00000020779) IGSF9 (ENSLAFG00000030174) Hyrax MODERN SPECIES 10789 ENSPCAG00000009078 ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Artiodactyla ANCESTRAL SPECIES ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C Artiodactyla_b ANCESTRAL SPECIES ENSGT01060000248581.B ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C Pecora ANCESTRAL SPECIES 2 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT00940000169892 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Goat MODERN SPECIES 22 OR6P1 (ENSCHIG00000005020) ENSCHIG00000022764 ENSCHIG00000026989 OR10Z1 (ENSCHIG00000012237) SPTA1 (ENSCHIG00000011339) OR6K2 (ENSCHIG00000008686) ENSCHIG00000019277 ENSCHIG00000011316 OR6K6 (ENSCHIG00000014750) OR6N1 (ENSCHIG00000008383) ENSCHIG00000003378 ENSCHIG00000007836 ENSCHIG00000017677 CADM3 (ENSCHIG00000009485) ACKR1 (ENSCHIG00000003089) ENSCHIG00000026176 ##22 ENSCHIG00000024468 FCER1A (ENSCHIG00000011885) OR10J3 (ENSCHIG00000023434) ENSCHIG00000017998 ENSCHIG00000011325 OR10J5 (ENSCHIG00000005144) APCS (ENSCHIG00000026603) ##22 CRP (ENSCHIG00000015232) ##22 DUSP23 (ENSCHIG00000014450) ENSCHIG00000026962 SLAMF8 (ENSCHIG00000017503) VSIG8 (ENSCHIG00000015221) CFAP45 (ENSCHIG00000016971) ENSCHIG00000027263 IGSF9 (ENSCHIG00000016643) Rambouillet Sheep MODERN SPECIES ENSOARG00020004324 ENSOARG00020004332 SPTA1 (ENSOARG00020004614) OR6K2 (ENSOARG00020008857) ENSOARG00020008863 ENSOARG00020008869 ENSOARG00020008882 ENSOARG00020008892 OR6K6 (ENSOARG00020008906) OR6N1 (ENSOARG00020008919) OR6N2 (ENSOARG00020008947) ENSOARG00020009002 ENSOARG00020009040 CADM3 (ENSOARG00020009216) ACKR1 (ENSOARG00020009415) ENSOARG00020009440 ##22 ENSOARG00020009480 FCER1A (ENSOARG00020009514) OR10J3 (ENSOARG00020009585) ENSOARG00020009605 OR10J4 (ENSOARG00020009614) OR10J1 (ENSOARG00020009631) ENSOARG00020009667 ENSOARG00020009707 ##22 ENSOARG00020009752 CRP (ENSOARG00020009837) ##22 DUSP23 (ENSOARG00020009880) FCRL6 (ENSOARG00020009962) VSIG8 (ENSOARG00020011063) CFAP45 (ENSOARG00020011195) TAGLN2 (ENSOARG00020011575) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a Bos ANCESTRAL SPECIES ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a Bos_b ANCESTRAL SPECIES 1 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a Cow MODERN SPECIES 22 OR10X1D (ENSBTAG00000053002) OR10X1 (ENSBTAG00000039653) OR10Z1 (ENSBTAG00000000574) SPTA1 (ENSBTAG00000000888) OR6K2 (ENSBTAG00000046650) OR6K4 (ENSBTAG00000003096) OR6K5 (ENSBTAG00000038961) OR6K6 (ENSBTAG00000013789) OR6N1 (ENSBTAG00000034601) OR6N2 (ENSBTAG00000012437) OR10AA1C (ENSBTAG00000051178) OR10AA1 (ENSBTAG00000052448) ENSBTAG00000011511 CADM3 (ENSBTAG00000003217) ACKR1 (ENSBTAG00000003220) MPTX1 (ENSBTAG00000012884) ##22 OR10J2 (ENSBTAG00000054463) FCER1A (ENSBTAG00000012887) OR10J3 (ENSBTAG00000012886) OR10J1 (ENSBTAG00000054539) OR10J4 (ENSBTAG00000019618) OR10J1 (ENSBTAG00000054704) OR10J5 (ENSBTAG00000019038) APCS (ENSBTAG00000019616) ##22 CRP (ENSBTAG00000013907) ##22 DUSP23 (ENSBTAG00000004776) FCRL6 (ENSBTAG00000017786) SLAMF8 (ENSBTAG00000016698) VSIG8 (ENSBTAG00000010670) CFAP45 (ENSBTAG00000018487) TAGLN2 (ENSBTAG00000002068) Bos_a ANCESTRAL SPECIES 27 ENSGT00940000161831.y.a ENSGT00940000161831.z ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a Domestic yak MODERN SPECIES 22 ENSBGRG00000010772 ENSBGRG00000010795 ENSBGRG00000010832 OR10Z1 (ENSBGRG00000010856) SPTA1 (ENSBGRG00000010893) OR6K2 (ENSBGRG00000011728) ENSBGRG00000011915 ENSBGRG00000011929 OR6K6 (ENSBGRG00000011983) OR6N1 (ENSBGRG00000012011) ENSBGRG00000012089 ENSBGRG00000012098 ENSBGRG00000012118 CADM3 (ENSBGRG00000012170) ACKR1 (ENSBGRG00000012260) ENSBGRG00000012300 ##22 ENSBGRG00000012318 FCER1A (ENSBGRG00000012407) OR10J3 (ENSBGRG00000012538) ENSBGRG00000012593 OR10J4 (ENSBGRG00000012658) OR10J1 (ENSBGRG00000012668) OR10J5 (ENSBGRG00000012702) APCS (ENSBGRG00000012713) ##22 CRP (ENSBGRG00000012746) ##22 DUSP23 (ENSBGRG00000012802) FCRL6 (ENSBGRG00000012845) SLAMF8 (ENSBGRG00000012927) VSIG8 (ENSBGRG00000013076) CFAP45 (ENSBGRG00000013191) TAGLN2 (ENSBGRG00000013398) Wild yak MODERN SPECIES 2368 CADM3 (ENSBMUG00000018925) ACKR1 (ENSBMUG00000018938) ENSBMUG00000018960 ##22 ENSBMUG00000018977 American bison MODERN SPECIES 3157 ENSBBBG00000021668 ENSBBBG00000021666 OR10Z1 (ENSBBBG00000021664) SPTA1 (ENSBBBG00000005753) OR6K2 (ENSBBBG00000021539) ENSBBBG00000021515 ENSBBBG00000021511 OR6K6 (ENSBBBG00000021503) OR6N1 (ENSBBBG00000021496) OR6N2 (ENSBBBG00000021491) ENSBBBG00000021486 ENSBBBG00000005722 ENSBBBG00000021475 CADM3 (ENSBBBG00000021327) ACKR1 (ENSBBBG00000007472) ENSBBBG00000021292 ##22 ENSBBBG00000021290 FCER1A (ENSBBBG00000021277) OR10J3 (ENSBBBG00000021271) ENSBBBG00000021266 OR10J1 (ENSBBBG00000005685) OR10J5 (ENSBBBG00000005683) APCS (ENSBBBG00000021254) ##22 CRP (ENSBBBG00000005680) ##22 DUSP23 (ENSBBBG00000021239) ENSBBBG00000021226 ENSBBBG00000021221 VSIG8 (ENSBBBG00000007017) CFAP45 (ENSBBBG00000021204) ENSBBBG00000021186 IGSF9 (ENSBBBG00000021170) Siberian musk deer MODERN SPECIES 1202 ENSMMSG00000018705 ENSMMSG00000018680 OR10Z1 (ENSMMSG00000018661) SPTA1 (ENSMMSG00000018431) OR6K2 (ENSMMSG00000018398) ENSMMSG00000018307 ENSMMSG00000018285 OR6K6 (ENSMMSG00000018272) OR6N1 (ENSMMSG00000018261) OR6N2 (ENSMMSG00000018251) ENSMMSG00000018242 ENSMMSG00000018229 ENSMMSG00000018195 CADM3 (ENSMMSG00000018118) ENSMMSG00000018083 ENSMMSG00000018052 ##22 ENSMMSG00000018017 FCER1A (ENSMMSG00000017993) OR10J3 (ENSMMSG00000017973) ENSMMSG00000017939 OR10J1 (ENSMMSG00000017920) OR10J5 (ENSMMSG00000017905) APCS (ENSMMSG00000022674) ##22 CRP (ENSMMSG00000022649) ##22 DUSP23 (ENSMMSG00000022636) FCRL6 (ENSMMSG00000022621) SLAMF8 (ENSMMSG00000022599) VSIG8 (ENSMMSG00000022583) CFAP45 (ENSMMSG00000022539) ENSMMSG00000022522 IGSF9 (ENSMMSG00000022490) Yarkand deer MODERN SPECIES 12 ENSCHYG00000014557 OR10Z1 (ENSCHYG00000014548) SPTA1 (ENSCHYG00000014009) OR6K2 (ENSCHYG00000013970) ENSCHYG00000013945 ENSCHYG00000013909 OR6K6 (ENSCHYG00000013879) OR6N1 (ENSCHYG00000013847) OR6N2 (ENSCHYG00000013819) ENSCHYG00000013788 ENSCHYG00000013771 ENSCHYG00000013656 ENSCHYG00000013641 CADM3 (ENSCHYG00000013522) ACKR1 (ENSCHYG00000015346) ENSCHYG00000015311 ##22 ENSCHYG00000015277 FCER1A (ENSCHYG00000015225) OR10J3 (ENSCHYG00000015193) ENSCHYG00000015115 OR10J1 (ENSCHYG00000015068) OR10J5 (ENSCHYG00000015044) APCS (ENSCHYG00000015004) ##22 ENSCHYG00000014929 ENSCHYG00000014886 CRP (ENSCHYG00000014795) ##22 FCRL6 (ENSCHYG00000014572) SLAMF8 (ENSCHYG00000014485) VSIG8 (ENSCHYG00000014335) CFAP45 (ENSCHYG00000014106) ENSCHYG00000014020 Cetacea ANCESTRAL SPECIES ENSGT00940000161974 ENSGT01050000244808.D.fb.b.b.a.v.b ENSGT00940000155795 ENSGT01100000263475.d.a.h ENSGT01100000263475.d.a.g.a.b ENSGT01100000263475.d.a.g.a.a ENSGT00940000161377.y.b ENSGT00940000154227.a.a.c.b ENSGT00940000164339 ENSGT00940000161377.y.a ENSGT00940000154227.a.a.d ENSGT00940000161240 ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.f ENSGT00940000160444 Blue whale MODERN SPECIES KIRREL1 (ENSBMSG00010003396) ENSBMSG00010003471 ENSBMSG00010003480 ENSBMSG00010003489 ENSBMSG00010003495 CD1E (ENSBMSG00010003526) ENSBMSG00010003679 OR10R2 (ENSBMSG00010003685) OR10K2 (ENSBMSG00010003694) ENSBMSG00010003699 ENSBMSG00010003703 SPTA1 (ENSBMSG00010003731) ENSBMSG00010003801 CADM3 (ENSBMSG00010003820) ACKR1 (ENSBMSG00010003846) ENSBMSG00010003852 ##22 FCER1A (ENSBMSG00010003865) OR10J3 (ENSBMSG00010003881) ENSBMSG00010003896 CRP (ENSBMSG00010003910) ##22 ENSBMSG00010003919 DUSP23 (ENSBMSG00010003926) SLAMF8 (ENSBMSG00010003959) VSIG8 (ENSBMSG00010003973) CFAP45 (ENSBMSG00010003982) TAGLN2 (ENSBMSG00010003989) IGSF9 (ENSBMSG00010004001) ENSBMSG00010004017 KCNJ9 (ENSBMSG00010004026) IGSF8 (ENSBMSG00010004031) ATP1A2 (ENSBMSG00010004045) Suina ANCESTRAL SPECIES 8 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b.a ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C Pig MODERN SPECIES 12 ENSSSCG00000053007 ENSSSCG00000053506 ENSSSCG00000037724 OR10Z1 (ENSSSCG00000006447) ENSSSCG00000041628 OR6K6 (ENSSSCG00000006425) SPTA1 (ENSSSCG00000006431) OR6N2 (ENSSSCG00000006423) ENSSSCG00000062209 ENSSSCG00000058298 ENSSSCG00000054760 MNDA (ENSSSCG00000037532) ENSSSCG00000006418 CADM3 (ENSSSCG00000006415) ACKR1 (ENSSSCG00000036223) ENSSSCG00000048076 ##22 ENSSSCG00000058649 FCER1A (ENSSSCG00000006413) OR10J3 (ENSSSCG00000056406) ENSSSCG00000042263 OR10J4 (ENSSSCG00000029064) OR10J1 (ENSSSCG00000024008) OR10J5 (ENSSSCG00000058791) APCS (ENSSSCG00000037268) ##22 ENSSSCG00000054109 CRP (ENSSSCG00000006403) ##22 ENSSSCG00000060222 DUSP23 (ENSSSCG00000033585) FCRL6 (ENSSSCG00000006397) SLAMF8 (ENSSSCG00000006398) VSIG8 (ENSSSCG00000006399) Chacoan peccary MODERN SPECIES 139 OR10Z1 (ENSCWAG00000015623) SPTA1 (ENSCWAG00000015673) OR6K2 (ENSCWAG00000015975) OR6K3 (ENSCWAG00000015982) ENSCWAG00000015992 ENSCWAG00000016001 OR6K6 (ENSCWAG00000016033) OR6N1 (ENSCWAG00000016044) OR6N2 (ENSCWAG00000016054) ENSCWAG00000016061 ENSCWAG00000016089 ENSCWAG00000016119 ENSCWAG00000016179 CADM3 (ENSCWAG00000016207) ACKR1 (ENSCWAG00000016337) ENSCWAG00000016376 ##22 FCER1A (ENSCWAG00000016444) OR10J3 (ENSCWAG00000016506) ENSCWAG00000016513 ENSCWAG00000016524 OR10J1 (ENSCWAG00000016572) APCS (ENSCWAG00000016624) ##22 ENSCWAG00000016650 ENSCWAG00000016674 ##22 CRP (ENSCWAG00000016701) ##22 DUSP23 (ENSCWAG00000016731) SLAMF8 (ENSCWAG00000007725) VSIG8 (ENSCWAG00000007824) CFAP45 (ENSCWAG00000007904) TAGLN2 (ENSCWAG00000008118) IGSF9 (ENSCWAG00000008204) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Equus ANCESTRAL SPECIES 3 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a.b ENSGT00390000013296.a.a.a.b ENSGT00390000013296.a.a.a.a.b ENSGT00390000013296.a.a.a.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Horse MODERN SPECIES 26 OR6K3 (ENSECAG00000003416) OR6K4 (ENSECAG00000003379) OR6K5 (ENSECAG00000003326) OR6N1 (ENSECAG00000001690) OR6N2 (ENSECAG00000001139) OR10AA1 (ENSECAG00000048778) OR10AA6 (ENSECAG00000037360) ENSECAG00000020728 MNDA (ENSECAG00000059340) ENSECAG00000058447 ENSECAG00000052401 ENSECAG00000014696 AIM2 (ENSECAG00000014480) CADM3 (ENSECAG00000009553) ACKR1 (ENSECAG00000000874) MPTX1 (ENSECAG00000009260) ##22 FCER1A (ENSECAG00000008710) OR10J7 (ENSECAG00000005575) OR10J2 (ENSECAG00000034321) OR10J4 (ENSECAG00000054331) OR10J1 (ENSECAG00000040571) ENSECAG00000051429 ENSECAG00000046419 DUSP23 (ENSECAG00000024776) CRP (ENSECAG00000024874) ##22 FCRL6 (ENSECAG00000024610) SLAMF8 (ENSECAG00000023720) TAGLN2 (ENSECAG00000010107) CFAP45 (ENSECAG00000014880) IGSF9 (ENSECAG00000023765) SLAMF9 (ENSECAG00000022218) Euarchontoglires ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Glires ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Rodentia ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Rodentia_A ANCESTRAL SPECIES ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Hystricomorpha ANCESTRAL SPECIES 2 ENSGT01090000260024.A.a.b.a.b.a.a.b ENSGT01060000248581.B ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.b ENSGT00940000163654 ENSGT00940000162870.e.a ENSGT00940000163968 ENSGT00940000165113 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Naked mole-rat female MODERN SPECIES 20 MIA (ENSHGLG00000045648) RAB4B (ENSHGLG00000002175) EGLN2 (ENSHGLG00000002594) ENSHGLG00000002623 ENSHGLG00000002809 ENSHGLG00000003483 ENSHGLG00000042055 ENSHGLG00000006982 ENSHGLG00000036410 ENSHGLG00000035317 ENSHGLG00000021284 ENSHGLG00000043082 ENSHGLG00000009754 CADM3 (ENSHGLG00000006499) ACKR1 (ENSHGLG00000047411) ENSHGLG00000010350 ##22 ENSHGLG00000020531 FCER1A (ENSHGLG00000007498) ENSHGLG00000043592 ENSHGLG00000040096 OR10J4 (ENSHGLG00000020816) APCS (ENSHGLG00000047260) ##22 CRP (ENSHGLG00000015003) ##22 ENSHGLG00000047194 DUSP23 (ENSHGLG00000037025) SLAMF8 (ENSHGLG00000041257) VSIG8 (ENSHGLG00000008875) CFAP45 (ENSHGLG00000007235) ENSHGLG00000006396 IGSF9 (ENSHGLG00000014869) SLAMF9 (ENSHGLG00000014754) Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT01090000260024.A.a.b.a.b.a.a.b ENSGT01060000248581.B ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.a ENSGT00940000162870.e.b ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Hystricomorpha_b ANCESTRAL SPECIES 8 ENSGT01100000263475.d.a.g.a.b.h ENSGT00940000161377 ENSGT01090000260024.A.a.b.a.b.a.a.b ENSGT01060000248581.B ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.a ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Long-tailed chinchilla MODERN SPECIES 175 ENSCLAG00000017955 OR10K1 (ENSCLAG00000017857) OR6Y1 (ENSCLAG00000017765) OR6P1 (ENSCLAG00000017760) OR10Z1 (ENSCLAG00000017848) SPTA1 (ENSCLAG00000013250) ENSCLAG00000017851 ENSCLAG00000017875 OR6K6 (ENSCLAG00000017779) OR6N1 (ENSCLAG00000017922) OR6N2 (ENSCLAG00000017826) ENSCLAG00000018025 ENSCLAG00000011827 CADM3 (ENSCLAG00000011984) ACKR1 (ENSCLAG00000012793) ENSCLAG00000013233 ##22 ENSCLAG00000017841 FCER1A (ENSCLAG00000013176) OR10J3 (ENSCLAG00000017924) APCS (ENSCLAG00000013265) ##22 DUSP23 (ENSCLAG00000013049) SLAMF8 (ENSCLAG00000014996) VSIG8 (ENSCLAG00000015894) CFAP45 (ENSCLAG00000013119) TAGLN2 (ENSCLAG00000015785) IGSF9 (ENSCLAG00000013469) SLAMF9 (ENSCLAG00000014897) PIGM (ENSCLAG00000017954) KCNJ10 (ENSCLAG00000017311) KCNJ9 (ENSCLAG00000012616) IGSF8 (ENSCLAG00000011758) Degu MODERN SPECIES 157 SPTA1 (ENSODEG00000011975) ENSODEG00000019839 ENSODEG00000010408 ENSODEG00000012962 ENSODEG00000008976 ENSODEG00000008520 CADM3 (ENSODEG00000008092) ACKR1 (ENSODEG00000009370) ENSODEG00000008544 ENSODEG00000010881 ##22 ENSODEG00000011465 ENSODEG00000019581 ENSODEG00000008155 APCS (ENSODEG00000007873) ##22 ENSODEG00000008105 DUSP23 (ENSODEG00000008041) SLAMF8 (ENSODEG00000007757) VSIG8 (ENSODEG00000008970) CFAP45 (ENSODEG00000009032) IGSF9 (ENSODEG00000008294) SLAMF9 (ENSODEG00000008986) PIGM (ENSODEG00000019551) KCNJ10 (ENSODEG00000008231) KCNJ9 (ENSODEG00000009424) IGSF8 (ENSODEG00000011607) Guinea pig MODERN SPECIES 56 ENSCPOG00000026368 ENSCPOG00000023544 OR6P1 (ENSCPOG00000001865) OR10X1 (ENSCPOG00000001866) OR10Z1 (ENSCPOG00000038071) SPTA1 (ENSCPOG00000001867) ENSCPOG00000038713 ENSCPOG00000021677 OR6K6 (ENSCPOG00000015473) OR6N2 (ENSCPOG00000004259) ENSCPOG00000008779 ENSCPOG00000008556 ENSCPOG00000025018 CADM3 (ENSCPOG00000010800) ACKR1 (ENSCPOG00000024213) ENSCPOG00000026658 ##22 ENSCPOG00000006414 OR10J3 (ENSCPOG00000037408) ENSCPOG00000032628 ENSCPOG00000023288 OR10J4 (ENSCPOG00000025720) APCS (ENSCPOG00000009766) ##22 CRP (ENSCPOG00000013154) ##22 DUSP23 (ENSCPOG00000034085) ENSCPOG00000020521 SLAMF8 (ENSCPOG00000036904) VSIG8 (ENSCPOG00000003207) CFAP45 (ENSCPOG00000004457) TAGLN2 (ENSCPOG00000027416) IGSF9 (ENSCPOG00000004460) SLAMF9 (ENSCPOG00000007992) Sciuridae ANCESTRAL SPECIES ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Marmotini ANCESTRAL SPECIES 65 ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a.c ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Marmotini_b ANCESTRAL SPECIES 83 ENSGT00940000161831 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a.c ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Squirrel MODERN SPECIES 340 ENSSTOG00000029778 OR10R2 (ENSSTOG00000021514) ENSSTOG00000027608 OR6P1 (ENSSTOG00000004879) OR10X1 (ENSSTOG00000004882) OR10Z1 (ENSSTOG00000015251) SPTA1 (ENSSTOG00000015256) OR6K6 (ENSSTOG00000008031) OR6N1 (ENSSTOG00000028298) OR6N2 (ENSSTOG00000008055) MNDA (ENSSTOG00000027408) ENSSTOG00000034795 AIM2 (ENSSTOG00000008132) CADM3 (ENSSTOG00000025214) ACKR1 (ENSSTOG00000032562) ENSSTOG00000033220 ##22 ENSSTOG00000004550 ENSSTOG00000014023 OR10J3 (ENSSTOG00000004564) OR10J4 (ENSSTOG00000021702) OR10J1 (ENSSTOG00000004574) OR10J5 (ENSSTOG00000004580) APCS (ENSSTOG00000022183) ##22 CRP (ENSSTOG00000024783) ##22 SLAMF8 (ENSSTOG00000007395) VSIG8 (ENSSTOG00000007410) CFAP45 (ENSSTOG00000007432) TAGLN2 (ENSSTOG00000028012) IGSF9 (ENSSTOG00000027707) SLAMF9 (ENSSTOG00000007452) PIGM (ENSSTOG00000021767) Rodentia_B ANCESTRAL SPECIES ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Myomorpha ANCESTRAL SPECIES 16 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Muroidea ANCESTRAL SPECIES 9 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Muroidea_A ANCESTRAL SPECIES 12 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.f.b ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Cricetidae ANCESTRAL SPECIES 13 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Cricetinae ANCESTRAL SPECIES 4 ENSGT00940000164179 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Golden Hamster MODERN SPECIES 697 Rgs7 (ENSMAUG00000010632) Grem2 (ENSMAUG00000018477) ENSMAUG00000010198 Spta1 (ENSMAUG00000000194) Or6k2 (ENSMAUG00000018299) Or6k8-ps1 (ENSMAUG00000018076) Or6k6 (ENSMAUG00000018183) Or6n2 (ENSMAUG00000018276) ENSMAUG00000001345 ENSMAUG00000004249 ENSMAUG00000010132 ENSMAUG00000012460 Aim2 (ENSMAUG00000012690) Cadm3 (ENSMAUG00000015645) Ackr1 (ENSMAUG00000015131) ENSMAUG00000015197 ##22 Fcer1a (ENSMAUG00000016317) ENSMAUG00000018501 Or10j5 (ENSMAUG00000001340) Apcs (ENSMAUG00000011083) ##22 Crp (ENSMAUG00000012308) ##22 Dusp23 (ENSMAUG00000012353) Fcrl6 (ENSMAUG00000012715) Slamf8 (ENSMAUG00000013303) Vsig8 (ENSMAUG00000013550) Cfap45 (ENSMAUG00000014684) Tagln2 (ENSMAUG00000015755) Igsf9 (ENSMAUG00000016697) Slamf9 (ENSMAUG00000002531) Pigm (ENSMAUG00000002040) Kcnj10 (ENSMAUG00000003384) Chinese hamster chok1gshd MODERN SPECIES 2 Or6k8-ps1 (ENSCGRG00001012151) Or6k4 (ENSCGRG00001011624) Or6k6 (ENSCGRG00001011357) Or6k14 (ENSCGRG00001011444) Or6n1 (ENSCGRG00001012208) Or6n2 (ENSCGRG00001011534) Or10aa3 (ENSCGRG00001012969) Or10aa1 (ENSCGRG00001012217) ENSCGRG00001016682 ENSCGRG00001021135 ENSCGRG00001024308 ENSCGRG00001024890 Aim2 (ENSCGRG00001014376) Cadm3 (ENSCGRG00001025045) Ackr1 (ENSCGRG00001021594) ENSCGRG00001002954 ##22 Or10j2 (ENSCGRG00001012095) Fcer1a (ENSCGRG00001011286) Or10j3b (ENSCGRG00001012422) Or10j3 (ENSCGRG00001001033) ENSCGRG00001012729 ENSCGRG00001012248 ENSCGRG00001012364 Or10j5 (ENSCGRG00001002194) Apcs (ENSCGRG00001024627) ##22 Crp (ENSCGRG00001024968) ##22 Dusp23 (ENSCGRG00001025037) ENSCGRG00001025048 Slamf8 (ENSCGRG00001019455) Vsig8 (ENSCGRG00001023265) Cfap45 (ENSCGRG00001013630) Cricetidae_B ANCESTRAL SPECIES 8 ENSGT00940000164179 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Northern American deer mouse MODERN SPECIES 2 Or6k4 (ENSPEMG00000006930) Or6k6 (ENSPEMG00000006375) Or6k14 (ENSPEMG00000025902) Or6n1 (ENSPEMG00000025007) Or6n2 (ENSPEMG00000003303) Or10aa3 (ENSPEMG00000025482) Or10aa1 (ENSPEMG00000029871) ENSPEMG00000026137 ENSPEMG00000021482 ENSPEMG00000009093 ENSPEMG00000028701 ENSPEMG00000005047 ENSPEMG00000017606 Cadm3 (ENSPEMG00000003579) Ackr1 (ENSPEMG00000017601) ENSPEMG00000013567 ##22 Or10j2 (ENSPEMG00000001739) Fcer1a (ENSPEMG00000016296) Or10j3b (ENSPEMG00000024812) Or10j3 (ENSPEMG00000029514) ENSPEMG00000014050 ENSPEMG00000002551 Or10j5 (ENSPEMG00000001889) Apcs (ENSPEMG00000017741) ##22 Crp (ENSPEMG00000024726) ##22 Dusp23 (ENSPEMG00000011195) Slamf8 (ENSPEMG00000015798) Vsig8 (ENSPEMG00000009137) Cfap45 (ENSPEMG00000016692) Tagln2 (ENSPEMG00000010399) Igsf9 (ENSPEMG00000011335) Prairie vole MODERN SPECIES 118 Or6y1 (ENSMOCG00000006081) Or10z1 (ENSMOCG00000005345) Spta1 (ENSMOCG00000004568) Or6k2 (ENSMOCG00000002872) ENSMOCG00000001731 Or6k4 (ENSMOCG00000003407) Or6k6 (ENSMOCG00000002933) Or6n2 (ENSMOCG00000002377) ENSMOCG00000001010 ENSMOCG00000021059 ENSMOCG00000014760 ENSMOCG00000019015 Aim2 (ENSMOCG00000018788) Cadm3 (ENSMOCG00000009497) Ackr1 (ENSMOCG00000014680) ENSMOCG00000015105 ##22 Fcer1a (ENSMOCG00000017859) ENSMOCG00000002640 Or10j5 (ENSMOCG00000002391) Apcs (ENSMOCG00000015189) ##22 Crp (ENSMOCG00000021079) ##22 Dusp23 (ENSMOCG00000021329) Slamf8 (ENSMOCG00000008354) Vsig8 (ENSMOCG00000016054) Cfap45 (ENSMOCG00000008042) Tagln2 (ENSMOCG00000014146) Igsf9 (ENSMOCG00000000988) Slamf9 (ENSMOCG00000014177) Pigm (ENSMOCG00000001955) Kcnj10 (ENSMOCG00000015793) Kcnj9 (ENSMOCG00000017119) Murinae ANCESTRAL SPECIES 11 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.f.b ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Mus DUPLICATION Mus ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.a.a ##22 Mus_A ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.a.a ##22 Mus_B ANCESTRAL SPECIES 7 ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000162973.b ENSGT00940000162973.a ENSGT00940000164179 ENSGT00940000163294 ENSGT00940000161240 ENSGT00940000162983 ENSGT01100000263515.a.b.a.b.b.h.a.a.a ##22 ENSGT00940000161831.eb ENSGT00940000161831.db ENSGT01090000260024.A.a.b.a.b.a.a.b ENSGT00940000161899 ENSGT00940000154209.a.b ENSGT00940000156661 ENSGT00950000183122.A ENSGT00390000000747 ENSGT01100000263502.A.a.b ENSGT00950000182994.A.n.b ENSGT00940000160037 ENSGT00510000047676 ENSGT00390000008164.d ENSGT00730000111185.n.b ENSGT00950000183059.b.a.b Mus_C ANCESTRAL SPECIES 1 ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000162973.b ENSGT00940000162973.a ENSGT00940000164179 ENSGT00940000163294 ENSGT00940000161240 ENSGT00940000162983 ENSGT01100000263515.a.b.a.b.b.h.a.a.a ##22 ENSGT00940000161831.eb ENSGT01090000260024.A.a.b.a.b.a.a.b ENSGT00940000161899 ENSGT00940000154209.a.b ENSGT00940000156661 ENSGT00950000183122.A ENSGT00390000000747 ENSGT01100000263502.A.a.b ENSGT00950000182994.A.n.b ENSGT00940000160037 ENSGT00510000047676 ENSGT00390000008164.d ENSGT00950000183059.b.a.b ENSGT00940000155103.a.b ENSGT00730000111198 Steppe mouse MODERN SPECIES 2139 Or10aa1 (ENSMSIG00000012163) Or10aa3 (ENSMSIG00000012171) Or6n2 (ENSMSIG00000012181) ENSMSIG00000012195 Or6n1 (ENSMSIG00000012202) Or6k14 (ENSMSIG00000012213) Or6k6 (ENSMSIG00000012276) Or6k4 (ENSMSIG00000012291) ENSMSIG00000012307 Or6k8-ps1 (ENSMSIG00000012314) Or6k2 (ENSMSIG00000012340) Spta1 (ENSMSIG00000012356) Or10z1 (ENSMSIG00000012446) Mptx1 (ENSMSIG00000012456) ##22 spretus MODERN SPECIES Cadm3 (MGP_SPRETEiJ_G0015719) MGP_SPRETEiJ_G0015720 MGP_SPRETEiJ_G0015724 Ifi202b (MGP_SPRETEiJ_G0015725) Or10aa1 (MGP_SPRETEiJ_G0015726) Or10aa3 (MGP_SPRETEiJ_G0015727) Or6n2 (MGP_SPRETEiJ_G0015728) Or6n1 (MGP_SPRETEiJ_G0015729) MGP_SPRETEiJ_G0015730 Or6k6 (MGP_SPRETEiJ_G0015731) Or6k4 (MGP_SPRETEiJ_G0015732) Or6k8-ps1 (MGP_SPRETEiJ_G0009401) Or6k2 (MGP_SPRETEiJ_G0015733) Spta1 (MGP_SPRETEiJ_G0015734) Or10z1 (MGP_SPRETEiJ_G0015735) Mptx1 (MGP_SPRETEiJ_G0015736) ##22 Or10x1 (MGP_SPRETEiJ_G0015737) Or6p1 (MGP_SPRETEiJ_G0015738) Or6y1 (MGP_SPRETEiJ_G0015739) Fmn2 (MGP_SPRETEiJ_G0015740) Grem2 (MGP_SPRETEiJ_G0015741) Rgs7 (MGP_SPRETEiJ_G0015742) Fh1 (MGP_SPRETEiJ_G0015743) Kmo (MGP_SPRETEiJ_G0015744) Opn3 (MGP_SPRETEiJ_G0015745) Chml (MGP_SPRETEiJ_G0015746) Wdr64 (MGP_SPRETEiJ_G0015747) Exo1 (MGP_SPRETEiJ_G0015748) Becn2 (MGP_SPRETEiJ_G0015749) Pld5 (MGP_SPRETEiJ_G0015750) MGP_SPRETEiJ_G0015751 Mouse MODERN SPECIES Ifi211 (ENSMUSG00000026536) Ifi203 (ENSMUSG00000039997) Ifi202b (ENSMUSG00000026535) Ifi205 (ENSMUSG00000054203) Or10aa1 (ENSMUSG00000045381) Or10aa3 (ENSMUSG00000047048) Or6n2 (ENSMUSG00000050134) Or6n1 (ENSMUSG00000049528) Or6k14 (ENSMUSG00000059371) Or6k6 (ENSMUSG00000046486) Or6k4 (ENSMUSG00000051528) Or6k8-ps1 (ENSMUSG00000091950) Or6k2 (ENSMUSG00000055033) Spta1 (ENSMUSG00000026532) Or10z1 (ENSMUSG00000050788) Mptx1 (ENSMUSG00000026531) ##22 Or10x1 (ENSMUSG00000066672) Or10x4 (ENSMUSG00000059503) Or6p1 (ENSMUSG00000051509) Or6y1 (ENSMUSG00000066671) Fmn2 (ENSMUSG00000028354) Grem2 (ENSMUSG00000050069) Rgs7 (ENSMUSG00000026527) Fh1 (ENSMUSG00000026526) Kmo (ENSMUSG00000039783) Opn3 (ENSMUSG00000026525) Chml (ENSMUSG00000078185) Wdr64 (ENSMUSG00000026523) Exo1 (ENSMUSG00000039748) Becn2 (ENSMUSG00000104158) Pld5 (ENSMUSG00000055214) Mus ANCESTRAL SPECIES 5 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 18 Or6k4 (MGP_PahariEiJ_G0028165) Or6k6 (MGP_PahariEiJ_G0028164) Or6k14 (MGP_PahariEiJ_G0028163) Or6n1 (MGP_PahariEiJ_G0028162) Or6n2 (MGP_PahariEiJ_G0028161) Or10aa3 (MGP_PahariEiJ_G0028160) Or10aa1 (MGP_PahariEiJ_G0028159) Ifi209 (MGP_PahariEiJ_G0028158) Ifi214 (MGP_PahariEiJ_G0028157) MGP_PahariEiJ_G0028156 MGP_PahariEiJ_G0028155 MGP_PahariEiJ_G0028154 MGP_PahariEiJ_G0028153 Cadm3 (MGP_PahariEiJ_G0028152) Ackr1 (MGP_PahariEiJ_G0028151) MGP_PahariEiJ_G0028150 ##22 MGP_PahariEiJ_G0028149 ##22 Or10j2 (MGP_PahariEiJ_G0028148) Or10j3b (MGP_PahariEiJ_G0028147) Or10j7 (MGP_PahariEiJ_G0028146) Or10j27 (MGP_PahariEiJ_G0028145) Or10j5 (MGP_PahariEiJ_G0028143) Apcs (MGP_PahariEiJ_G0028142) ##22 Crp (MGP_PahariEiJ_G0028141) ##22 Dusp23 (MGP_PahariEiJ_G0028140) MGP_PahariEiJ_G0028139 Slamf8 (MGP_PahariEiJ_G0028138) Vsig8 (MGP_PahariEiJ_G0028137) Cfap45 (MGP_PahariEiJ_G0028136) Tagln2 (MGP_PahariEiJ_G0028135) Igsf9 (MGP_PahariEiJ_G0028134) Shrew mouse MODERN SPECIES 18 Or6k6 (MGP_PahariEiJ_G0028164) Or6k14 (MGP_PahariEiJ_G0028163) Or6n1 (MGP_PahariEiJ_G0028162) Or6n2 (MGP_PahariEiJ_G0028161) Or10aa3 (MGP_PahariEiJ_G0028160) Or10aa1 (MGP_PahariEiJ_G0028159) Ifi209 (MGP_PahariEiJ_G0028158) Ifi214 (MGP_PahariEiJ_G0028157) MGP_PahariEiJ_G0028156 MGP_PahariEiJ_G0028155 MGP_PahariEiJ_G0028154 MGP_PahariEiJ_G0028153 Cadm3 (MGP_PahariEiJ_G0028152) Ackr1 (MGP_PahariEiJ_G0028151) MGP_PahariEiJ_G0028150 ##22 MGP_PahariEiJ_G0028149 ##22 Or10j2 (MGP_PahariEiJ_G0028148) Or10j3b (MGP_PahariEiJ_G0028147) Or10j7 (MGP_PahariEiJ_G0028146) Or10j27 (MGP_PahariEiJ_G0028145) Or10j5 (MGP_PahariEiJ_G0028143) Apcs (MGP_PahariEiJ_G0028142) ##22 Crp (MGP_PahariEiJ_G0028141) ##22 Dusp23 (MGP_PahariEiJ_G0028140) MGP_PahariEiJ_G0028139 Slamf8 (MGP_PahariEiJ_G0028138) Vsig8 (MGP_PahariEiJ_G0028137) Cfap45 (MGP_PahariEiJ_G0028136) Tagln2 (MGP_PahariEiJ_G0028135) Igsf9 (MGP_PahariEiJ_G0028134) Slamf9 (MGP_PahariEiJ_G0028133) Mus_A ANCESTRAL SPECIES 5 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Mus_B ANCESTRAL SPECIES 7 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Mouse MODERN SPECIES Ifi205 (ENSMUSG00000054203) Ifi202b (ENSMUSG00000026535) Ifi203 (ENSMUSG00000039997) Ifi211 (ENSMUSG00000026536) Mndal (ENSMUSG00000090272) Ifi204 (ENSMUSG00000073489) Ifi207 (ENSMUSG00000073490) Ifi208 (ENSMUSG00000066677) Ifi209 (ENSMUSG00000043263) Ifi213 (ENSMUSG00000073491) Ifi214 (ENSMUSG00000070501) Ifi206 (ENSMUSG00000037849) Aim2 (ENSMUSG00000037860) Cadm3 (ENSMUSG00000005338) Ackr1 (ENSMUSG00000037872) Mptx2 (ENSMUSG00000079180) ##22 Or10j2 (ENSMUSG00000049605) Fcer1a (ENSMUSG00000005339) Or10j3b (ENSMUSG00000049456) Or10j3 (ENSMUSG00000046643) Or10j7 (ENSMUSG00000058981) Or10j27 (ENSMUSG00000062527) Or10j5 (ENSMUSG00000037924) Apcs (ENSMUSG00000026542) ##22 Crp (ENSMUSG00000037942) ##22 Dusp23 (ENSMUSG00000026544) Fcrl6 (ENSMUSG00000070504) Slamf8 (ENSMUSG00000053318) Vsig8 (ENSMUSG00000049598) Cfap45 (ENSMUSG00000026546) Tagln2 (ENSMUSG00000026547) Mus_C ANCESTRAL SPECIES 1 ENSGT00940000164179 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 Steppe mouse MODERN SPECIES 2732 ENSMSIG00000031997 Aim2 (ENSMSIG00000031998) ENSMSIG00000031999 Ifi209 (ENSMSIG00000032000) ENSMSIG00000032001 ENSMSIG00000032002 Ackr1 (ENSMSIG00000032003) Mptx2 (ENSMSIG00000032006) ##22 ENSMSIG00000032007 Fcer1a (ENSMSIG00000032010) Or10j3b (ENSMSIG00000032011) Or10j3 (ENSMSIG00000032012) Or10j7 (ENSMSIG00000032013) Or10j27 (ENSMSIG00000032014) Or10j5 (ENSMSIG00000032015) Apcs (ENSMSIG00000032017) ##22 Dusp23 (ENSMSIG00000032021) spretus MODERN SPECIES Spta1 (MGP_SPRETEiJ_G0015734) Or6k2 (MGP_SPRETEiJ_G0015733) Or6k8-ps1 (MGP_SPRETEiJ_G0009401) Or6k4 (MGP_SPRETEiJ_G0015732) Or6k6 (MGP_SPRETEiJ_G0015731) MGP_SPRETEiJ_G0015730 Or6n1 (MGP_SPRETEiJ_G0015729) Or6n2 (MGP_SPRETEiJ_G0015728) Or10aa3 (MGP_SPRETEiJ_G0015727) Or10aa1 (MGP_SPRETEiJ_G0015726) Ifi202b (MGP_SPRETEiJ_G0015725) MGP_SPRETEiJ_G0015724 MGP_SPRETEiJ_G0015720 Cadm3 (MGP_SPRETEiJ_G0015719) Ackr1 (MGP_SPRETEiJ_G0015718) Mptx2 (MGP_SPRETEiJ_G0015717) ##22 MGP_SPRETEiJ_G0015716 Fcer1a (MGP_SPRETEiJ_G0015715) Or10j3b (MGP_SPRETEiJ_G0015714) MGP_SPRETEiJ_G0015713 Or10j7 (MGP_SPRETEiJ_G0015712) Or10j27 (MGP_SPRETEiJ_G0015711) Or10j5 (MGP_SPRETEiJ_G0015710) Apcs (MGP_SPRETEiJ_G0015709) ##22 Crp (MGP_SPRETEiJ_G0015708) ##22 Dusp23 (MGP_SPRETEiJ_G0015707) Fcrl6 (MGP_SPRETEiJ_G0015706) Slamf8 (MGP_SPRETEiJ_G0015705) Vsig8 (MGP_SPRETEiJ_G0015704) Cfap45 (MGP_SPRETEiJ_G0015703) Tagln2 (MGP_SPRETEiJ_G0015702) Rat MODERN SPECIES 4 Or6k2 (ENSRNOG00000057400) Or6k8 (ENSRNOG00000022329) ENSRNOG00000066569 Or6k4 (ENSRNOG00000003521) Or6k6 (ENSRNOG00000003518) Or6n1 (ENSRNOG00000022387) Or10aa3 (ENSRNOG00000050941) Mnda (ENSRNOG00000003486) Olr1585 (ENSRNOG00000064497) ENSRNOG00000069878 RGD1562462 (ENSRNOG00000065043) LOC102556096 (ENSRNOG00000065208) Aim2 (ENSRNOG00000003480) Cadm3 (ENSRNOG00000003365) Ackr1 (ENSRNOG00000069330) Mptx1 (ENSRNOG00000046165) ##22 Or10j2 (ENSRNOG00000049477) Fcer1a (ENSRNOG00000009177) Or10j3b (ENSRNOG00000067763) Or10j3 (ENSRNOG00000062538) Or10j27 (ENSRNOG00000064146) Or10j7 (ENSRNOG00000064078) Or10j5 (ENSRNOG00000009141) Apcs (ENSRNOG00000009086) ##22 LOC108348980 (ENSRNOG00000028939) Crp (ENSRNOG00000000053) Dusp23 (ENSRNOG00000022143) Fcrl6 (ENSRNOG00000000055) Slamf8 (ENSRNOG00000008736) Vsig8 (ENSRNOG00000008668) Cfap45 (ENSRNOG00000008492) Upper Galilee mountains blind mole rat MODERN SPECIES 1119 Or6k6 (ENSNGAG00000019536) Spta1 (ENSNGAG00000014572) Or6k14 (ENSNGAG00000000691) ENSNGAG00000011188 ENSNGAG00000019400 Aim2 (ENSNGAG00000017033) Cadm3 (ENSNGAG00000005609) Ackr1 (ENSNGAG00000001707) ENSNGAG00000000729 ##22 ENSNGAG00000000474 Fcer1a (ENSNGAG00000013961) Crp (ENSNGAG00000020190) ##22 Dusp23 (ENSNGAG00000000743) Slamf8 (ENSNGAG00000018862) Vsig8 (ENSNGAG00000008436) Cfap45 (ENSNGAG00000001181) Tagln2 (ENSNGAG00000000484) Igsf9 (ENSNGAG00000014249) Kcnj10 (ENSNGAG00000020981) Kcnj9 (ENSNGAG00000020566) Igsf8 (ENSNGAG00000016168) Atp1a2 (ENSNGAG00000018905) Casq1 (ENSNGAG00000011364) Pea15a (ENSNGAG00000008317) Kangaroo rat MODERN SPECIES 450 Arhgef11 (ENSDORG00000012872) ENSDORG00000012874 ENSDORG00000029911 Fcrl1 (ENSDORG00000015350) Cd5l (ENSDORG00000015348) Fcrls (ENSDORG00000029618) Kirrel (ENSDORG00000006781) ENSDORG00000023523 Or10k2 (ENSDORG00000006909) ENSDORG00000013579 ENSDORG00000023576 Spta1 (ENSDORG00000016657) ENSDORG00000025844 Cadm3 (ENSDORG00000007812) Ackr1 (ENSDORG00000007815) ENSDORG00000006655 ##22 ENSDORG00000026308 ENSDORG00000008016 Apcs (ENSDORG00000005557) ##22 Crp (ENSDORG00000003120) ##22 Dusp23 (ENSDORG00000025635) Slamf8 (ENSDORG00000003126) Vsig8 (ENSDORG00000009694) Cfap45 (ENSDORG00000010843) Tagln2 (ENSDORG00000010844) Igsf9 (ENSDORG00000010846) Pigm (ENSDORG00000011680) Kcnj10 (ENSDORG00000011681) Kcnj9 (ENSDORG00000026272) Igsf8 (ENSDORG00000007975) Atp1a2 (ENSDORG00000025124) Primates ANCESTRAL SPECIES 7 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 Lemuriformes ANCESTRAL SPECIES 11 ENSGT01090000260024.A.a.b.a.b.a.a.a.a ENSGT00940000161831 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.b.b ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Lemuriformes_a ANCESTRAL SPECIES 57 ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Greater bamboo lemur MODERN SPECIES 1029 MNDA (ENSPSMG00000017064) ENSPSMG00000017057 ENSPSMG00000016982 AIM2 (ENSPSMG00000016906) ENSPSMG00000016897 CADM3 (ENSPSMG00000016884) ACKR1 (ENSPSMG00000016853) ENSPSMG00000016847 ##22 ENSPSMG00000016840 FCER1A (ENSPSMG00000016836) OR10J3 (ENSPSMG00000016824) ENSPSMG00000016818 OR10J1 (ENSPSMG00000016808) OR10J5 (ENSPSMG00000016803) ENSPSMG00000016797 ##22 APCS (ENSPSMG00000016792) ##22 ENSPSMG00000016785 ENSPSMG00000016782 ##22 Mouse lemur MODERN SPECIES 11 CD5L (ENSMICG00000033978) ENSMICG00000027266 KIRREL1 (ENSMICG00000004939) CD1D (ENSMICG00000037665) ENSMICG00000035400 CD1B (ENSMICG00000030172) CD1E (ENSMICG00000010222) OR10R2 (ENSMICG00000045901) SPTA1 (ENSMICG00000014994) MNDA (ENSMICG00000042551) ENSMICG00000041873 ENSMICG00000005874 AIM2 (ENSMICG00000014429) CADM3 (ENSMICG00000011231) ACKR1 (ENSMICG00000028836) ENSMICG00000032934 ##22 FCER1A (ENSMICG00000011252) ENSMICG00000037456 APCS (ENSMICG00000046846) ##22 OR10J5 (ENSMICG00000036914) ENSMICG00000026470 DUSP23 (ENSMICG00000031321) SLAMF8 (ENSMICG00000047756) CFAP45 (ENSMICG00000015529) ENSMICG00000032549 IGSF9 (ENSMICG00000011340) SLAMF9 (ENSMICG00000011363) ENSMICG00000043093 KCNJ9 (ENSMICG00000028846) IGSF8 (ENSMICG00000047269) ATP1A2 (ENSMICG00000007914) Bushbaby MODERN SPECIES 206 OR10X1 (ENSOGAG00000030722) OR10Z1 (ENSOGAG00000000256) SPTA1 (ENSOGAG00000000257) ENSOGAG00000028167 OR6K2 (ENSOGAG00000000258) ENSOGAG00000034011 ENSOGAG00000009647 ENSOGAG00000029998 OR6K6 (ENSOGAG00000000259) OR6N1 (ENSOGAG00000000260) OR6N2 (ENSOGAG00000000261) ENSOGAG00000000262 ENSOGAG00000006378 AIM2 (ENSOGAG00000000264) CADM3 (ENSOGAG00000005112) ENSOGAG00000030893 ##22 ENSOGAG00000015572 FCER1A (ENSOGAG00000015574) OR10J3 (ENSOGAG00000026374) ENSOGAG00000031740 ENSOGAG00000032740 OR10J4 (ENSOGAG00000032393) OR10J1 (ENSOGAG00000030157) OR10J5 (ENSOGAG00000034929) ENSOGAG00000029779 ##22 APCS (ENSOGAG00000001034) ##22 ENSOGAG00000015384 CRP (ENSOGAG00000010689) ##22 DUSP23 (ENSOGAG00000010691) SLAMF8 (ENSOGAG00000010698) VSIG8 (ENSOGAG00000010701) Theria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Artiodactyla ANCESTRAL SPECIES ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Suina ANCESTRAL SPECIES 8 ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b.a ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Chacoan peccary MODERN SPECIES 139 OR6K6 (ENSCWAG00000016033) OR6N1 (ENSCWAG00000016044) OR6N2 (ENSCWAG00000016054) ENSCWAG00000016061 ENSCWAG00000016089 ENSCWAG00000016119 ENSCWAG00000016179 CADM3 (ENSCWAG00000016207) ACKR1 (ENSCWAG00000016337) ENSCWAG00000016376 ##22 FCER1A (ENSCWAG00000016444) OR10J3 (ENSCWAG00000016506) ENSCWAG00000016513 ENSCWAG00000016524 OR10J1 (ENSCWAG00000016572) APCS (ENSCWAG00000016624) ##22 ENSCWAG00000016650 ENSCWAG00000016674 ##22 CRP (ENSCWAG00000016701) ##22 DUSP23 (ENSCWAG00000016731) SLAMF8 (ENSCWAG00000007725) VSIG8 (ENSCWAG00000007824) CFAP45 (ENSCWAG00000007904) TAGLN2 (ENSCWAG00000008118) IGSF9 (ENSCWAG00000008204) SLAMF9 (ENSCWAG00000008674) PIGM (ENSCWAG00000008752) KCNJ10 (ENSCWAG00000008771) KCNJ9 (ENSCWAG00000008781) IGSF8 (ENSCWAG00000008813) ATP1A2 (ENSCWAG00000008877) Pig MODERN SPECIES 12 ENSSSCG00000062209 ENSSSCG00000058298 ENSSSCG00000054760 MNDA (ENSSSCG00000037532) ENSSSCG00000006418 CADM3 (ENSSSCG00000006415) ACKR1 (ENSSSCG00000036223) ENSSSCG00000048076 ##22 ENSSSCG00000058649 FCER1A (ENSSSCG00000006413) OR10J3 (ENSSSCG00000056406) ENSSSCG00000042263 OR10J4 (ENSSSCG00000029064) OR10J1 (ENSSSCG00000024008) OR10J5 (ENSSSCG00000058791) APCS (ENSSSCG00000037268) ##22 ENSSSCG00000054109 CRP (ENSSSCG00000006403) ##22 ENSSSCG00000060222 DUSP23 (ENSSSCG00000033585) FCRL6 (ENSSSCG00000006397) SLAMF8 (ENSSSCG00000006398) VSIG8 (ENSSSCG00000006399) CFAP45 (ENSSSCG00000006394) ENSSSCG00000006395 IGSF9 (ENSSSCG00000006396) SLAMF9 (ENSSSCG00000056276) KCNJ10 (ENSSSCG00000031858) KCNJ9 (ENSSSCG00000006393) IGSF8 (ENSSSCG00000006392) ATP1A2 (ENSSSCG00000006391) Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Camelidae ANCESTRAL SPECIES 162 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 Alpaca MODERN SPECIES 4236 FCER1A (ENSVPAG00000010224) OR10J5 (ENSVPAG00000010227) APCS (ENSVPAG00000010228) ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000169892 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Cetacea ANCESTRAL SPECIES ENSGT01100000263475.d.a.g.a.a ENSGT00940000161377.y.b ENSGT00940000154227.a.a.c.b ENSGT00940000164339 ENSGT00940000161377.y.a ENSGT00940000154227.a.a.d ENSGT00940000161240 ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00860000136134.a ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.f ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Odontoceti ANCESTRAL SPECIES ENSGT01100000263475.d.a.h ENSGT01100000263475.d.a.g.a.b ENSGT00390000018829.g.b.c.b ENSGT00940000164339 ENSGT00940000161377.y.a ENSGT00940000161377.y.b ENSGT00940000154227.a.a.d ENSGT00940000161240 ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.f ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Sperm whale MODERN SPECIES 15 ENSPCTG00005002880 OR10K1 (ENSPCTG00005002868) OR10R2 (ENSPCTG00005002855) SPTA1 (ENSPCTG00005002796) OR6N2 (ENSPCTG00005002751) ENSPCTG00005002740 ENSPCTG00005002728 ENSPCTG00005002719 CADM3 (ENSPCTG00005002690) ACKR1 (ENSPCTG00005002668) ENSPCTG00005002662 FCER1A (ENSPCTG00005002651) OR10J3 (ENSPCTG00005002639) ENSPCTG00005002622 ENSPCTG00005002613 APCS (ENSPCTG00005002592) ##22 ENSPCTG00005002583 CRP (ENSPCTG00005002569) ##22 DUSP23 (ENSPCTG00005002559) SLAMF8 (ENSPCTG00005002506) VSIG8 (ENSPCTG00005002489) CFAP45 (ENSPCTG00005002458) ENSPCTG00005002406 KCNJ9 (ENSPCTG00005002389) IGSF8 (ENSPCTG00005002378) ATP1A2 (ENSPCTG00005002328) ENSPCTG00005002292 PEA15 (ENSPCTG00005002277) DCAF8 (ENSPCTG00005002235) PEX19 (ENSPCTG00005002201) COPA (ENSPCTG00005001916) Pecora ANCESTRAL SPECIES 2 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT00940000169892 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Goat MODERN SPECIES 22 ENSCHIG00000011316 OR6K6 (ENSCHIG00000014750) OR6N1 (ENSCHIG00000008383) ENSCHIG00000003378 ENSCHIG00000007836 ENSCHIG00000017677 CADM3 (ENSCHIG00000009485) ACKR1 (ENSCHIG00000003089) ENSCHIG00000026176 ##22 ENSCHIG00000024468 FCER1A (ENSCHIG00000011885) OR10J3 (ENSCHIG00000023434) ENSCHIG00000017998 ENSCHIG00000011325 OR10J5 (ENSCHIG00000005144) APCS (ENSCHIG00000026603) ##22 CRP (ENSCHIG00000015232) ##22 DUSP23 (ENSCHIG00000014450) ENSCHIG00000026962 SLAMF8 (ENSCHIG00000017503) VSIG8 (ENSCHIG00000015221) CFAP45 (ENSCHIG00000016971) ENSCHIG00000027263 IGSF9 (ENSCHIG00000016643) SLAMF9 (ENSCHIG00000021051) PIGM (ENSCHIG00000006611) KCNJ10 (ENSCHIG00000001309) KCNJ9 (ENSCHIG00000019813) IGSF8 (ENSCHIG00000010633) ATP1A2 (ENSCHIG00000026690) ATP1A4 (ENSCHIG00000024568) Rambouillet Sheep MODERN SPECIES OR6K6 (ENSOARG00020008906) OR6N1 (ENSOARG00020008919) OR6N2 (ENSOARG00020008947) ENSOARG00020009002 ENSOARG00020009040 CADM3 (ENSOARG00020009216) ACKR1 (ENSOARG00020009415) ENSOARG00020009440 ##22 ENSOARG00020009480 FCER1A (ENSOARG00020009514) OR10J3 (ENSOARG00020009585) ENSOARG00020009605 OR10J4 (ENSOARG00020009614) OR10J1 (ENSOARG00020009631) ENSOARG00020009667 ENSOARG00020009707 ##22 ENSOARG00020009752 CRP (ENSOARG00020009837) ##22 DUSP23 (ENSOARG00020009880) FCRL6 (ENSOARG00020009962) VSIG8 (ENSOARG00020011063) CFAP45 (ENSOARG00020011195) TAGLN2 (ENSOARG00020011575) IGSF9 (ENSOARG00020011725) SLAMF9 (ENSOARG00020012175) PIGM (ENSOARG00020012224) ENSOARG00020012253 KCNJ9 (ENSOARG00020012322) IGSF8 (ENSOARG00020012420) ATP1A2 (ENSOARG00020012599) CASQ1 (ENSOARG00020015333) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Bos ANCESTRAL SPECIES ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Cow MODERN SPECIES 22 OR6N1 (ENSBTAG00000034601) OR6N2 (ENSBTAG00000012437) OR10AA1C (ENSBTAG00000051178) OR10AA1 (ENSBTAG00000052448) ENSBTAG00000011511 CADM3 (ENSBTAG00000003217) ACKR1 (ENSBTAG00000003220) MPTX1 (ENSBTAG00000012884) ##22 OR10J2 (ENSBTAG00000054463) FCER1A (ENSBTAG00000012887) OR10J3 (ENSBTAG00000012886) OR10J1 (ENSBTAG00000054539) OR10J4 (ENSBTAG00000019618) OR10J1 (ENSBTAG00000054704) OR10J5 (ENSBTAG00000019038) APCS (ENSBTAG00000019616) ##22 CRP (ENSBTAG00000013907) ##22 DUSP23 (ENSBTAG00000004776) FCRL6 (ENSBTAG00000017786) SLAMF8 (ENSBTAG00000016698) VSIG8 (ENSBTAG00000010670) CFAP45 (ENSBTAG00000018487) TAGLN2 (ENSBTAG00000002068) IGSF9 (ENSBTAG00000001481) SLAMF9 (ENSBTAG00000007241) PIGM (ENSBTAG00000002419) ENSBTAG00000052815 KCNJ10 (ENSBTAG00000002414) KCNJ9 (ENSBTAG00000024507) IGSF8 (ENSBTAG00000009982) ATP1A2 (ENSBTAG00000010551) Hybrid Bos Indicus MODERN SPECIES 22 OR6K6 (ENSBIXG00005016807) OR6N1 (ENSBIXG00005006387) OR6N2 (ENSBIXG00005016832) ENSBIXG00005002721 ENSBIXG00005016852 ENSBIXG00005016857 CADM3 (ENSBIXG00005016922) ENSBIXG00005016871 ENSBIXG00005016944 ENSBIXG00005016973 OR10J3 (ENSBIXG00005016990) ENSBIXG00005002759 OR10J4 (ENSBIXG00005017025) OR10J1 (ENSBIXG00005017037) OR10J5 (ENSBIXG00005017053) APCS (ENSBIXG00005017069) ##22 CRP (ENSBIXG00005017082) ##22 ENSBIXG00005017121 DUSP23 (ENSBIXG00005006864) FCRL6 (ENSBIXG00005017159) SLAMF8 (ENSBIXG00005017188) VSIG8 (ENSBIXG00005007559) CFAP45 (ENSBIXG00005017272) ENSBIXG00005017333 IGSF9 (ENSBIXG00005017383) SLAMF9 (ENSBIXG00005017409) PIGM (ENSBIXG00005017436) ENSBIXG00005017448 KCNJ10 (ENSBIXG00005017473) IGSF8 (ENSBIXG00005002843) KCNJ9 (ENSBIXG00005017542) Bos_a ANCESTRAL SPECIES 27 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.g.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Domestic yak MODERN SPECIES 22 OR6K6 (ENSBGRG00000011983) OR6N1 (ENSBGRG00000012011) ENSBGRG00000012089 ENSBGRG00000012098 ENSBGRG00000012118 CADM3 (ENSBGRG00000012170) ACKR1 (ENSBGRG00000012260) ENSBGRG00000012300 ##22 ENSBGRG00000012318 FCER1A (ENSBGRG00000012407) OR10J3 (ENSBGRG00000012538) ENSBGRG00000012593 OR10J4 (ENSBGRG00000012658) OR10J1 (ENSBGRG00000012668) OR10J5 (ENSBGRG00000012702) APCS (ENSBGRG00000012713) ##22 CRP (ENSBGRG00000012746) ##22 DUSP23 (ENSBGRG00000012802) FCRL6 (ENSBGRG00000012845) SLAMF8 (ENSBGRG00000012927) VSIG8 (ENSBGRG00000013076) CFAP45 (ENSBGRG00000013191) TAGLN2 (ENSBGRG00000013398) IGSF9 (ENSBGRG00000013549) SLAMF9 (ENSBGRG00000014099) PIGM (ENSBGRG00000014127) ENSBGRG00000014154 ENSBGRG00000014217 KCNJ9 (ENSBGRG00000014272) IGSF8 (ENSBGRG00000014336) ATP1A2 (ENSBGRG00000014422) Wild yak MODERN SPECIES 2242 APCS (ENSBMUG00000017430) ##22 American bison MODERN SPECIES 3157 OR6K6 (ENSBBBG00000021503) OR6N1 (ENSBBBG00000021496) OR6N2 (ENSBBBG00000021491) ENSBBBG00000021486 ENSBBBG00000005722 ENSBBBG00000021475 CADM3 (ENSBBBG00000021327) ACKR1 (ENSBBBG00000007472) ENSBBBG00000021292 ##22 ENSBBBG00000021290 FCER1A (ENSBBBG00000021277) OR10J3 (ENSBBBG00000021271) ENSBBBG00000021266 OR10J1 (ENSBBBG00000005685) OR10J5 (ENSBBBG00000005683) APCS (ENSBBBG00000021254) ##22 CRP (ENSBBBG00000005680) ##22 DUSP23 (ENSBBBG00000021239) ENSBBBG00000021226 ENSBBBG00000021221 VSIG8 (ENSBBBG00000007017) CFAP45 (ENSBBBG00000021204) ENSBBBG00000021186 IGSF9 (ENSBBBG00000021170) SLAMF9 (ENSBBBG00000021116) PIGM (ENSBBBG00000007328) KCNJ10 (ENSBBBG00000021092) ENSBBBG00000021084 KCNJ9 (ENSBBBG00000008179) IGSF8 (ENSBBBG00000021074) ATP1A2 (ENSBBBG00000021037) Siberian musk deer MODERN SPECIES 1202 OR6K6 (ENSMMSG00000018272) OR6N1 (ENSMMSG00000018261) OR6N2 (ENSMMSG00000018251) ENSMMSG00000018242 ENSMMSG00000018229 ENSMMSG00000018195 CADM3 (ENSMMSG00000018118) ENSMMSG00000018083 ENSMMSG00000018052 ##22 ENSMMSG00000018017 FCER1A (ENSMMSG00000017993) OR10J3 (ENSMMSG00000017973) ENSMMSG00000017939 OR10J1 (ENSMMSG00000017920) OR10J5 (ENSMMSG00000017905) APCS (ENSMMSG00000022674) ##22 CRP (ENSMMSG00000022649) ##22 DUSP23 (ENSMMSG00000022636) FCRL6 (ENSMMSG00000022621) SLAMF8 (ENSMMSG00000022599) VSIG8 (ENSMMSG00000022583) CFAP45 (ENSMMSG00000022539) ENSMMSG00000022522 IGSF9 (ENSMMSG00000022490) SLAMF9 (ENSMMSG00000022472) PIGM (ENSMMSG00000022464) ENSMMSG00000022453 KCNJ9 (ENSMMSG00000022446) IGSF8 (ENSMMSG00000022434) ATP1A2 (ENSMMSG00000022405) ATP1A4 (ENSMMSG00000022343) Yarkand deer MODERN SPECIES 12 OR6N1 (ENSCHYG00000013847) OR6N2 (ENSCHYG00000013819) ENSCHYG00000013788 ENSCHYG00000013771 ENSCHYG00000013656 ENSCHYG00000013641 CADM3 (ENSCHYG00000013522) ACKR1 (ENSCHYG00000015346) ENSCHYG00000015311 ##22 ENSCHYG00000015277 FCER1A (ENSCHYG00000015225) OR10J3 (ENSCHYG00000015193) ENSCHYG00000015115 OR10J1 (ENSCHYG00000015068) OR10J5 (ENSCHYG00000015044) APCS (ENSCHYG00000015004) ##22 ENSCHYG00000014929 ENSCHYG00000014886 CRP (ENSCHYG00000014795) ##22 FCRL6 (ENSCHYG00000014572) SLAMF8 (ENSCHYG00000014485) VSIG8 (ENSCHYG00000014335) CFAP45 (ENSCHYG00000014106) ENSCHYG00000014020 IGSF9 (ENSCHYG00000013599) SLAMF9 (ENSCHYG00000013521) PIGM (ENSCHYG00000013484) ENSCHYG00000013430 ENSCHYG00000013386 KCNJ9 (ENSCHYG00000013360) IGSF8 (ENSCHYG00000013238) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Carnivora ANCESTRAL SPECIES 14 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.b ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Caniformia ANCESTRAL SPECIES 10 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.b ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Caniformia_b ANCESTRAL SPECIES 8 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.b ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Mustelinae ANCESTRAL SPECIES 23 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.b ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D.d.a American mink MODERN SPECIES 260 OR6K6 (ENSNVIG00000021930) OR6N1 (ENSNVIG00000021931) OR6N2 (ENSNVIG00000021935) ENSNVIG00000021939 ENSNVIG00000021942 ENSNVIG00000021950 CADM3 (ENSNVIG00000022008) ACKR1 (ENSNVIG00000000045) ENSNVIG00000000074 FCER1A (ENSNVIG00000000084) OR10J3 (ENSNVIG00000000132) ENSNVIG00000000136 OR10J4 (ENSNVIG00000000142) OR10J1 (ENSNVIG00000000153) OR10J5 (ENSNVIG00000000158) APCS (ENSNVIG00000000162) ##22 ENSNVIG00000000167 ENSNVIG00000000171 SLAMF8 (ENSNVIG00000000175) VSIG8 (ENSNVIG00000000205) CFAP45 (ENSNVIG00000000220) ENSNVIG00000000250 IGSF9 (ENSNVIG00000000270) SLAMF9 (ENSNVIG00000000354) ENSNVIG00000000363 IGSF8 (ENSNVIG00000000372) ATP1A2 (ENSNVIG00000000411) ATP1A4 (ENSNVIG00000000458) ENSNVIG00000000494 PEA15 (ENSNVIG00000000508) DCAF8 (ENSNVIG00000000533) Ferret MODERN SPECIES 385 SPTA1 (ENSMPUG00000012860) ENSMPUG00000019462 OR6K6 (ENSMPUG00000019463) OR6N1 (ENSMPUG00000019464) OR6N2 (ENSMPUG00000019465) ENSMPUG00000013078 ENSMPUG00000013084 CADM3 (ENSMPUG00000013089) ACKR1 (ENSMPUG00000013096) ENSMPUG00000019466 ENSMPUG00000013100 OR10J3 (ENSMPUG00000019467) ENSMPUG00000019468 OR10J4 (ENSMPUG00000019469) OR10J1 (ENSMPUG00000019470) APCS (ENSMPUG00000013103) ##22 CRP (ENSMPUG00000013109) ##22 SLAMF8 (ENSMPUG00000013124) VSIG8 (ENSMPUG00000013132) CFAP45 (ENSMPUG00000013148) ENSMPUG00000013160 IGSF9 (ENSMPUG00000013170) ENSMPUG00000019471 SLAMF9 (ENSMPUG00000013175) KCNJ10 (ENSMPUG00000019472) KCNJ9 (ENSMPUG00000013180) IGSF8 (ENSMPUG00000013188) ATP1A2 (ENSMPUG00000013193) ATP1A4 (ENSMPUG00000013901) CASQ1 (ENSMPUG00000013930) PEA15 (ENSMPUG00000013933) Ursidae ANCESTRAL SPECIES 4 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b.c ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164490 Ursus ANCESTRAL SPECIES 112 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00860000136134.a ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 American black bear MODERN SPECIES 6297 APCS (ENSUAMG00000012805) ##22 ENSUAMG00000012809 Polar bear MODERN SPECIES 226 OR6K6 (ENSUMAG00000001894) OR6N1 (ENSUMAG00000001886) OR6N2 (ENSUMAG00000001874) ENSUMAG00000001859 MNDA (ENSUMAG00000001852) ENSUMAG00000001812 CADM3 (ENSUMAG00000001787) ENSUMAG00000001782 ENSUMAG00000001776 FCER1A (ENSUMAG00000001765) OR10J3 (ENSUMAG00000001748) ENSUMAG00000001741 ENSUMAG00000001730 OR10J4 (ENSUMAG00000001718) OR10J5 (ENSUMAG00000001706) APCS (ENSUMAG00000001661) ##22 ENSUMAG00000001644 ENSUMAG00000001588 FCRL6 (ENSUMAG00000001583) SLAMF8 (ENSUMAG00000001576) VSIG8 (ENSUMAG00000001569) CFAP45 (ENSUMAG00000001486) TAGLN2 (ENSUMAG00000001472) ENSUMAG00000001465 ENSUMAG00000001419 SLAMF9 (ENSUMAG00000001377) ENSUMAG00000001341 IGSF8 (ENSUMAG00000001297) ATP1A2 (ENSUMAG00000001114) ATP1A4 (ENSUMAG00000000818) CASQ1 (ENSUMAG00000000727) Giant Panda MODERN SPECIES 18 ENSAMEG00000018598 OR6K6 (ENSAMEG00000018600) OR6N1 (ENSAMEG00000018607) OR6N2 (ENSAMEG00000018617) ENSAMEG00000004074 ENSAMEG00000031107 ENSAMEG00000026507 MNDA (ENSAMEG00000029285) ENSAMEG00000004077 CADM3 (ENSAMEG00000004103) ACKR1 (ENSAMEG00000026437) ENSAMEG00000018629 FCER1A (ENSAMEG00000004132) OR10J4 (ENSAMEG00000015694) ENSAMEG00000019527 APCS (ENSAMEG00000024563) ##22 ENSAMEG00000015684 CRP (ENSAMEG00000024961) ##22 ENSAMEG00000030785 FCRL6 (ENSAMEG00000009469) SLAMF8 (ENSAMEG00000009477) VSIG8 (ENSAMEG00000009481) CFAP45 (ENSAMEG00000009487) ENSAMEG00000013938 IGSF9 (ENSAMEG00000013950) ENSAMEG00000013971 ENSAMEG00000023557 ENSAMEG00000013980 ATP1A2 (ENSAMEG00000013987) ENSAMEG00000014164 PEA15 (ENSAMEG00000014346) Felidae ANCESTRAL SPECIES 11 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Panthera ANCESTRAL SPECIES 32 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Panthera_a ANCESTRAL SPECIES 42 ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 lion MODERN SPECIES 17 OR6K3 (ENSPLOG00000020114) ENSPLOG00000020104 OR6K6 (ENSPLOG00000020086) OR6N1 (ENSPLOG00000020077) OR6N2 (ENSPLOG00000020067) ENSPLOG00000020049 ENSPLOG00000020040 CADM3 (ENSPLOG00000019932) ACKR1 (ENSPLOG00000019891) ENSPLOG00000019883 FCER1A (ENSPLOG00000019860) ENSPLOG00000019790 OR10J4 (ENSPLOG00000019760) OR10J1 (ENSPLOG00000019739) OR10J5 (ENSPLOG00000019721) APCS (ENSPLOG00000019684) ##22 ENSPLOG00000019670 DUSP23 (ENSPLOG00000019652) FCRL6 (ENSPLOG00000019509) SLAMF8 (ENSPLOG00000019412) VSIG8 (ENSPLOG00000019353) CFAP45 (ENSPLOG00000019212) TAGLN2 (ENSPLOG00000019161) IGSF9 (ENSPLOG00000019097) PIGM (ENSPLOG00000019076) KCNJ10 (ENSPLOG00000019063) KCNJ9 (ENSPLOG00000019025) IGSF8 (ENSPLOG00000018991) ATP1A2 (ENSPLOG00000018633) ATP1A4 (ENSPLOG00000018403) CASQ1 (ENSPLOG00000018283) Tiger MODERN SPECIES 198 ENSPTIG00000006062 ENSPTIG00000006065 OR10Z1 (ENSPTIG00000006076) SPTA1 (ENSPTIG00000017529) OR6K2 (ENSPTIG00000006104) ENSPTIG00000006108 ENSPTIG00000006129 OR6N1 (ENSPTIG00000006133) OR6N2 (ENSPTIG00000006140) ENSPTIG00000003789 CADM3 (ENSPTIG00000005553) ACKR1 (ENSPTIG00000007669) ENSPTIG00000008539 ENSPTIG00000006183 OR10J1 (ENSPTIG00000006198) ENSPTIG00000012230 ##22 CRP (ENSPTIG00000006220) ##22 FCRL6 (ENSPTIG00000012925) SLAMF8 (ENSPTIG00000015058) VSIG8 (ENSPTIG00000015260) CFAP45 (ENSPTIG00000015852) TAGLN2 (ENSPTIG00000018079) ENSPTIG00000018902 Cat MODERN SPECIES 248 OR6K2 (ENSFCAG00000029376) ENSFCAG00000013453 OR6K3 (ENSFCAG00000040462) ENSFCAG00000013454 ENSFCAG00000013455 ENSFCAG00000015615 OR6N2 (ENSFCAG00000044911) ENSFCAG00000052900 ENSFCAG00000031916 CADM3 (ENSFCAG00000015269) ACKR1 (ENSFCAG00000018619) FCER1A (ENSFCAG00000015276) OR10J3 (ENSFCAG00000029247) ENSFCAG00000023051 OR10J4 (ENSFCAG00000023747) APCS (ENSFCAG00000010503) ##22 CRP (ENSFCAG00000029168) ##22 ENSFCAG00000031034 DUSP23 (ENSFCAG00000044162) FCRL6 (ENSFCAG00000027611) SLAMF8 (ENSFCAG00000008526) VSIG8 (ENSFCAG00000008527) CFAP45 (ENSFCAG00000008529) TAGLN2 (ENSFCAG00000016255) IGSF9 (ENSFCAG00000031301) PIGM (ENSFCAG00000008535) KCNJ10 (ENSFCAG00000043392) KCNJ9 (ENSFCAG00000015120) IGSF8 (ENSFCAG00000003922) ATP1A4 (ENSFCAG00000005397) CASQ1 (ENSFCAG00000003923) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Equus ANCESTRAL SPECIES 3 ENSGT00390000013296.a.a.a.b ENSGT00390000013296.a.a.a.a.b ENSGT00390000013296.a.a.a.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00860000136134.b ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Donkey MODERN SPECIES 17 ENSEASG00005003304 ENSEASG00005003298 ENSEASG00005003295 ENSEASG00005003292 AIM2 (ENSEASG00005003291) CADM3 (ENSEASG00005003284) ACKR1 (ENSEASG00005003282) ENSEASG00005003280 ENSEASG00005037234 FCER1A (ENSEASG00005003275) OR10J3 (ENSEASG00005003270) ENSEASG00005036276 OR10J4 (ENSEASG00005003261) OR10J1 (ENSEASG00005003259) OR10J5 (ENSEASG00005003258) APCS (ENSEASG00005003250) ##22 CRP (ENSEASG00005033075) ##22 DUSP23 (ENSEASG00005027029) FCRL6 (ENSEASG00005033326) SLAMF8 (ENSEASG00005003238) VSIG8 (ENSEASG00005003234) CFAP45 (ENSEASG00005003225) TAGLN2 (ENSEASG00005003221) IGSF9 (ENSEASG00005003211) SLAMF9 (ENSEASG00005003205) ENSEASG00005003200 PIGM (ENSEASG00005003195) KCNJ10 (ENSEASG00005029215) KCNJ9 (ENSEASG00005003190) IGSF8 (ENSEASG00005003188) ATP1A2 (ENSEASG00005002641) Chiroptera ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 Megabat MODERN SPECIES 5870 ENSPVAG00000008974 ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Primates DUPLICATION Primates ANCESTRAL SPECIES 7 ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Haplorrhini ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Platyrrhini ANCESTRAL SPECIES 12 ENSGT00940000154227.a.a.c.b ENSGT01090000260024.A.a.b.a.b.a.a.a.a ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.b.d ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Cebidae ANCESTRAL SPECIES 12 ENSGT00940000154227.a.a.c.b ENSGT01090000260024.A.a.b.a.b.a.a.a.a ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.b.d ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 Marmoset MODERN SPECIES 9 OR6K2 (ENSCJAG00000006349) OR6K3 (ENSCJAG00000042642) OR6K6 (ENSCJAG00000022042) ENSCJAG00000076227 OR6N1 (ENSCJAG00000022041) OR6N2 (ENSCJAG00000022040) ENSCJAG00000047539 ENSCJAG00000042581 AIM2 (ENSCJAG00000006327) ENSCJAG00000077884 CADM3 (ENSCJAG00000006307) ACKR1 (ENSCJAG00000006303) FCER1A (ENSCJAG00000006292) OR10J3 (ENSCJAG00000061455) OR10J1 (ENSCJAG00000022039) ENSCJAG00000052551 ##22 APCS (ENSCJAG00000006279) ##22 CRP (ENSCJAG00000006271) ##22 DUSP23 (ENSCJAG00000080143) SLAMF8 (ENSCJAG00000006239) VSIG8 (ENSCJAG00000006224) CFAP45 (ENSCJAG00000006175) TAGLN2 (ENSCJAG00000006156) IGSF9 (ENSCJAG00000006107) SLAMF9 (ENSCJAG00000006099) ATP1A2 (ENSCJAG00000006022) ENSCJAG00000044098 ENSCJAG00000074194 KCNJ9 (ENSCJAG00000006092) IGSF8 (ENSCJAG00000041164) ENSCJAG00000079945 Cebidae_a ANCESTRAL SPECIES 203 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Bolivian squirrel monkey MODERN SPECIES 136 CD5L (ENSSBOG00000012883) KIRREL1 (ENSSBOG00000029815) CD1D (ENSSBOG00000022846) CD1A (ENSSBOG00000025767) CD1C (ENSSBOG00000020594) CD1B (ENSSBOG00000022672) CD1E (ENSSBOG00000025378) SPTA1 (ENSSBOG00000027374) PYHIN1 (ENSSBOG00000032136) ENSSBOG00000025692 AIM2 (ENSSBOG00000021470) CADM3 (ENSSBOG00000022549) ACKR1 (ENSSBOG00000026604) FCER1A (ENSSBOG00000028978) ENSSBOG00000014650 ENSSBOG00000024023 ##22 APCS (ENSSBOG00000032545) ##22 CRP (ENSSBOG00000009126) ##22 DUSP23 (ENSSBOG00000028584) FCRL6 (ENSSBOG00000035509) SLAMF8 (ENSSBOG00000026112) VSIG8 (ENSSBOG00000028536) CFAP45 (ENSSBOG00000008535) TAGLN2 (ENSSBOG00000032060) IGSF9 (ENSSBOG00000024421) SLAMF9 (ENSSBOG00000020320) ENSSBOG00000029266 KCNJ9 (ENSSBOG00000036068) IGSF8 (ENSSBOG00000021162) ATP1A2 (ENSSBOG00000026209) CASQ1 (ENSSBOG00000033165) Mas night monkey MODERN SPECIES 1180 CD1E (ENSANAG00000037188) OR10T2 (ENSANAG00000001894) ENSANAG00000019947 ENSANAG00000036137 OR10R2 (ENSANAG00000022932) SPTA1 (ENSANAG00000032115) MNDA (ENSANAG00000030402) PYHIN1 (ENSANAG00000038212) ENSANAG00000026091 AIM2 (ENSANAG00000022336) CADM3 (ENSANAG00000024662) ACKR1 (ENSANAG00000022852) FCER1A (ENSANAG00000006240) OR10J3 (ENSANAG00000032701) ENSANAG00000025018 ENSANAG00000030797 ##22 APCS (ENSANAG00000025821) ##22 CRP (ENSANAG00000030906) ##22 ENSANAG00000036469 FCRL6 (ENSANAG00000030620) SLAMF8 (ENSANAG00000028983) CFAP45 (ENSANAG00000022146) TAGLN2 (ENSANAG00000034482) IGSF9 (ENSANAG00000029906) SLAMF9 (ENSANAG00000032660) ENSANAG00000001403 KCNJ9 (ENSANAG00000025048) IGSF8 (ENSANAG00000028885) ATP1A2 (ENSANAG00000034710) CASQ1 (ENSANAG00000036861) PEA15 (ENSANAG00000034320) Catarrhini ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 Olive baboon MODERN SPECIES 156 ENSPANG00000043239 ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Bushbaby MODERN SPECIES 206 OR6N1 (ENSOGAG00000000260) OR6N2 (ENSOGAG00000000261) ENSOGAG00000000262 ENSOGAG00000006378 AIM2 (ENSOGAG00000000264) CADM3 (ENSOGAG00000005112) ENSOGAG00000030893 ##22 ENSOGAG00000015572 FCER1A (ENSOGAG00000015574) OR10J3 (ENSOGAG00000026374) ENSOGAG00000031740 ENSOGAG00000032740 OR10J4 (ENSOGAG00000032393) OR10J1 (ENSOGAG00000030157) OR10J5 (ENSOGAG00000034929) ENSOGAG00000029779 ##22 APCS (ENSOGAG00000001034) ##22 ENSOGAG00000015384 CRP (ENSOGAG00000010689) ##22 DUSP23 (ENSOGAG00000010691) SLAMF8 (ENSOGAG00000010698) VSIG8 (ENSOGAG00000010701) CFAP45 (ENSOGAG00000010704) TAGLN2 (ENSOGAG00000028515) IGSF9 (ENSOGAG00000034181) SLAMF9 (ENSOGAG00000013177) PIGM (ENSOGAG00000030907) KCNJ10 (ENSOGAG00000000856) KCNJ9 (ENSOGAG00000026356) IGSF8 (ENSOGAG00000024229) ATP1A2 (ENSOGAG00000011343) Lemuriformes ANCESTRAL SPECIES 11 ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Lemuriformes_a ANCESTRAL SPECIES 57 ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Greater bamboo lemur MODERN SPECIES 1029 MNDA (ENSPSMG00000017064) ENSPSMG00000017057 ENSPSMG00000016982 AIM2 (ENSPSMG00000016906) ENSPSMG00000016897 CADM3 (ENSPSMG00000016884) ACKR1 (ENSPSMG00000016853) ENSPSMG00000016847 ##22 ENSPSMG00000016840 FCER1A (ENSPSMG00000016836) OR10J3 (ENSPSMG00000016824) ENSPSMG00000016818 OR10J1 (ENSPSMG00000016808) OR10J5 (ENSPSMG00000016803) ENSPSMG00000016797 ##22 APCS (ENSPSMG00000016792) ##22 ENSPSMG00000016785 ENSPSMG00000016782 ##22 Primates ANCESTRAL SPECIES 7 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Lemuriformes ANCESTRAL SPECIES 11 ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a ENSGT00390000000230 Lemuriformes_a ANCESTRAL SPECIES 57 ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a ENSGT00390000000230 Greater bamboo lemur MODERN SPECIES 1029 MNDA (ENSPSMG00000017064) ENSPSMG00000017057 ENSPSMG00000016982 AIM2 (ENSPSMG00000016906) ENSPSMG00000016897 CADM3 (ENSPSMG00000016884) ACKR1 (ENSPSMG00000016853) ENSPSMG00000016847 ##22 ENSPSMG00000016840 FCER1A (ENSPSMG00000016836) OR10J3 (ENSPSMG00000016824) ENSPSMG00000016818 OR10J1 (ENSPSMG00000016808) OR10J5 (ENSPSMG00000016803) ENSPSMG00000016797 ##22 APCS (ENSPSMG00000016792) ##22 ENSPSMG00000016785 ENSPSMG00000016782 ##22 Coquerels sifaka MODERN SPECIES 877 AIM2 (ENSPCOG00000000060) CADM3 (ENSPCOG00000014604) ACKR1 (ENSPCOG00000009330) FCER1A (ENSPCOG00000019274) ENSPCOG00000011342 APCS (ENSPCOG00000014740) ##22 ENSPCOG00000000116 CRP (ENSPCOG00000013443) ##22 DUSP23 (ENSPCOG00000016262) SLAMF8 (ENSPCOG00000006445) VSIG8 (ENSPCOG00000006884) CFAP45 (ENSPCOG00000022408) TAGLN2 (ENSPCOG00000020750) IGSF9 (ENSPCOG00000015618) SLAMF9 (ENSPCOG00000026453) ENSPCOG00000020119 KCNJ9 (ENSPCOG00000017373) IGSF8 (ENSPCOG00000015734) ATP1A2 (ENSPCOG00000028575) ATP1A4 (ENSPCOG00000015025) CASQ1 (ENSPCOG00000013800) Mouse lemur MODERN SPECIES 11 CD1D (ENSMICG00000037665) ENSMICG00000035400 CD1B (ENSMICG00000030172) CD1E (ENSMICG00000010222) OR10R2 (ENSMICG00000045901) SPTA1 (ENSMICG00000014994) MNDA (ENSMICG00000042551) ENSMICG00000041873 ENSMICG00000005874 AIM2 (ENSMICG00000014429) CADM3 (ENSMICG00000011231) ACKR1 (ENSMICG00000028836) ENSMICG00000032934 ##22 FCER1A (ENSMICG00000011252) ENSMICG00000037456 APCS (ENSMICG00000046846) ##22 OR10J5 (ENSMICG00000036914) ENSMICG00000026470 DUSP23 (ENSMICG00000031321) SLAMF8 (ENSMICG00000047756) CFAP45 (ENSMICG00000015529) ENSMICG00000032549 IGSF9 (ENSMICG00000011340) SLAMF9 (ENSMICG00000011363) ENSMICG00000043093 KCNJ9 (ENSMICG00000028846) IGSF8 (ENSMICG00000047269) ATP1A2 (ENSMICG00000007914) CASQ1 (ENSMICG00000007986) PEA15 (ENSMICG00000007999) DCAF8 (ENSMICG00000008012) Bushbaby MODERN SPECIES 206 OR6N2 (ENSOGAG00000000261) ENSOGAG00000000262 ENSOGAG00000006378 AIM2 (ENSOGAG00000000264) CADM3 (ENSOGAG00000005112) ENSOGAG00000030893 ##22 ENSOGAG00000015572 FCER1A (ENSOGAG00000015574) OR10J3 (ENSOGAG00000026374) ENSOGAG00000031740 ENSOGAG00000032740 OR10J4 (ENSOGAG00000032393) OR10J1 (ENSOGAG00000030157) OR10J5 (ENSOGAG00000034929) ENSOGAG00000029779 ##22 APCS (ENSOGAG00000001034) ##22 ENSOGAG00000015384 CRP (ENSOGAG00000010689) ##22 DUSP23 (ENSOGAG00000010691) SLAMF8 (ENSOGAG00000010698) VSIG8 (ENSOGAG00000010701) CFAP45 (ENSOGAG00000010704) TAGLN2 (ENSOGAG00000028515) IGSF9 (ENSOGAG00000034181) SLAMF9 (ENSOGAG00000013177) PIGM (ENSOGAG00000030907) KCNJ10 (ENSOGAG00000000856) KCNJ9 (ENSOGAG00000026356) IGSF8 (ENSOGAG00000024229) ATP1A2 (ENSOGAG00000011343) CASQ1 (ENSOGAG00000027222) Haplorrhini ANCESTRAL SPECIES 7 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Simiiformes ANCESTRAL SPECIES 8 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Catarrhini ANCESTRAL SPECIES 10 ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Hominoidea ANCESTRAL SPECIES 7 ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Hominidae ANCESTRAL SPECIES 6 ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Pan ANCESTRAL SPECIES ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Bonobo MODERN SPECIES OR6K6 (ENSPPAG00000000252) OR6N1 (ENSPPAG00000016970) OR6N2 (ENSPPAG00000023460) ENSPPAG00000027802 MNDA (ENSPPAG00000032976) PYHIN1 (ENSPPAG00000040212) IFI16 (ENSPPAG00000029876) PYDC5 (ENSPPAG00000014426) AIM2 (ENSPPAG00000036780) CADM3 (ENSPPAG00000043482) ACKR1 (ENSPPAG00000032471) FCER1A (ENSPPAG00000027915) OR10J3 (ENSPPAG00000018051) ENSPPAG00000039398 OR10J5 (ENSPPAG00000019195) APCS (ENSPPAG00000041630) ##22 ENSPPAG00000031805 DUSP23 (ENSPPAG00000034723) VSIG8 (ENSPPAG00000037705) CFAP45 (ENSPPAG00000034778) ENSPPAG00000033877 IGSF9 (ENSPPAG00000038120) SLAMF9 (ENSPPAG00000033923) ENSPPAG00000038045 KCNJ9 (ENSPPAG00000034813) IGSF8 (ENSPPAG00000000240) ATP1A2 (ENSPPAG00000034264) ATP1A4 (ENSPPAG00000028678) CASQ1 (ENSPPAG00000032076) PEA15 (ENSPPAG00000029002) ENSPPAG00000027731 Chimpanzee MODERN SPECIES OR6K3 (ENSPTRG00000030371) OR6K6 (ENSPTRG00000001513) OR6N1 (ENSPTRG00000030370) OR6N2 (ENSPTRG00000030369) ENSPTRG00000043226 MNDA (ENSPTRG00000001515) PYHIN1 (ENSPTRG00000001517) PYDC5 (ENSPTRG00000045743) IFI16 (ENSPTRG00000001518) AIM2 (ENSPTRG00000001519) CADM3 (ENSPTRG00000001520) ACKR1 (ENSPTRG00000001521) FCER1A (ENSPTRG00000001523) ENSPTRG00000045894 OR10J5 (ENSPTRG00000001522) APCS (ENSPTRG00000001525) ##22 CRP (ENSPTRG00000001527) ##22 DUSP23 (ENSPTRG00000001528) FCRL6 (ENSPTRG00000001529) SLAMF8 (ENSPTRG00000001530) VSIG8 (ENSPTRG00000001531) CFAP45 (ENSPTRG00000034223) TAGLN2 (ENSPTRG00000001533) IGSF9 (ENSPTRG00000023194) SLAMF9 (ENSPTRG00000001535) ENSPTRG00000048956 KCNJ9 (ENSPTRG00000001538) IGSF8 (ENSPTRG00000001539) ATP1A2 (ENSPTRG00000048477) ATP1A4 (ENSPTRG00000001542) CASQ1 (ENSPTRG00000001544) Human MODERN SPECIES OR6N1 (ENSG00000197403) OR6K6 (ENSG00000180433) OR6N2 (ENSG00000188340) MNDA (ENSG00000163563) PYHIN1 (ENSG00000163564) IFI16 (ENSG00000163565) PYDC5 (ENSG00000289721) AIM2 (ENSG00000163568) CADM3 (ENSG00000162706) ACKR1 (ENSG00000213088) FCER1A (ENSG00000179639) OR10J3 (ENSG00000196266) OR10J4 (ENSG00000249730) OR10J1 (ENSG00000196184) OR10J5 (ENSG00000184155) APCS (ENSG00000132703) ##22 CRP (ENSG00000132693) ##22 DUSP23 (ENSG00000158716) FCRL6 (ENSG00000181036) SLAMF8 (ENSG00000158714) VSIG8 (ENSG00000243284) CFAP45 (ENSG00000213085) TAGLN2 (ENSG00000158710) IGSF9 (ENSG00000085552) SLAMF9 (ENSG00000162723) KCNJ10 (ENSG00000177807) PIGM (ENSG00000143315) KCNJ9 (ENSG00000162728) IGSF8 (ENSG00000162729) ATP1A2 (ENSG00000018625) ATP1A4 (ENSG00000132681) Gorilla MODERN SPECIES OR6N1 (ENSGGOG00000008834) ENSGGOG00000005806 MNDA (ENSGGOG00000005937) PYHIN1 (ENSGGOG00000012392) PYDC5 (ENSGGOG00000040558) IFI16 (ENSGGOG00000006123) AIM2 (ENSGGOG00000006135) CADM3 (ENSGGOG00000005133) ACKR1 (ENSGGOG00000005139) FCER1A (ENSGGOG00000021999) OR10J3 (ENSGGOG00000003857) ENSGGOG00000037710 ENSGGOG00000038043 OR10J1 (ENSGGOG00000040483) OR10J5 (ENSGGOG00000003035) APCS (ENSGGOG00000001492) ##22 CRP (ENSGGOG00000025795) ##22 DUSP23 (ENSGGOG00000014958) ENSGGOG00000042828 ENSGGOG00000039506 ENSGGOG00000025860 PIGM (ENSGGOG00000028160) KCNJ9 (ENSGGOG00000025489) IGSF8 (ENSGGOG00000004944) ATP1A2 (ENSGGOG00000004949) ATP1A4 (ENSGGOG00000013011) CASQ1 (ENSGGOG00000014642) PEA15 (ENSGGOG00000013024) ENSGGOG00000036406 DCAF8 (ENSGGOG00000013028) ENSGGOG00000041014 Orangutan MODERN SPECIES SPTA1 (ENSPPYG00000000673) OR6K2 (ENSPPYG00000000672) OR6K3 (ENSPPYG00000000671) OR6K6 (ENSPPYG00000000670) OR6N1 (ENSPPYG00000010633) OR6N2 (ENSPPYG00000000669) MNDA (ENSPPYG00000000667) ENSPPYG00000000666 ENSPPYG00000030874 IFI16 (ENSPPYG00000000665) AIM2 (ENSPPYG00000000664) CADM3 (ENSPPYG00000000663) ACKR1 (ENSPPYG00000000662) FCER1A (ENSPPYG00000000660) OR10J5 (ENSPPYG00000000658) APCS (ENSPPYG00000000657) ##22 CRP (ENSPPYG00000000655) ##22 DUSP23 (ENSPPYG00000000654) FCRL6 (ENSPPYG00000000653) SLAMF8 (ENSPPYG00000000652) VSIG8 (ENSPPYG00000000651) CFAP45 (ENSPPYG00000000650) ENSPPYG00000000648 IGSF9 (ENSPPYG00000000647) ENSPPYG00000000646 ENSPPYG00000035270 KCNJ9 (ENSPPYG00000000643) IGSF8 (ENSPPYG00000000642) ATP1A2 (ENSPPYG00000000641) ATP1A4 (ENSPPYG00000000640) CASQ1 (ENSPPYG00000000639) Gibbon MODERN SPECIES 2 OR6K6 (ENSNLEG00000019155) OR6N1 (ENSNLEG00000019156) ENSNLEG00000013108 MNDA (ENSNLEG00000013109) PYHIN1 (ENSNLEG00000013125) PYDC5 (ENSNLEG00000032594) IFI16 (ENSNLEG00000013156) AIM2 (ENSNLEG00000013170) CADM3 (ENSNLEG00000013186) ACKR1 (ENSNLEG00000019157) FCER1A (ENSNLEG00000013227) ENSNLEG00000013245 ENSNLEG00000034423 OR10J1 (ENSNLEG00000019158) OR10J5 (ENSNLEG00000019159) APCS (ENSNLEG00000013249) ##22 CRP (ENSNLEG00000013261) ##22 DUSP23 (ENSNLEG00000013271) FCRL6 (ENSNLEG00000013276) SLAMF8 (ENSNLEG00000013286) ENSNLEG00000035894 ENSNLEG00000013290 CFAP45 (ENSNLEG00000013296) ENSNLEG00000013350 IGSF9 (ENSNLEG00000013353) ENSNLEG00000013423 PIGM (ENSNLEG00000013425) ENSNLEG00000030285 ENSNLEG00000029263 IGSF8 (ENSNLEG00000013416) ATP1A2 (ENSNLEG00000028357) Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Rhinopithecus ANCESTRAL SPECIES 169 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Black snub-nosed monkey MODERN SPECIES 2544 OR10J5 (ENSRBIG00000039199) APCS (ENSRBIG00000041181) ##22 Golden snub-nosed monkey MODERN SPECIES 907 OR10J5 (ENSRROG00000034634) APCS (ENSRROG00000037754) ##22 CRP (ENSRROG00000044933) ##22 DUSP23 (ENSRROG00000037492) FCRL6 (ENSRROG00000040864) SLAMF8 (ENSRROG00000030911) VSIG8 (ENSRROG00000036238) CFAP45 (ENSRROG00000032010) TAGLN2 (ENSRROG00000040627) IGSF9 (ENSRROG00000041941) SLAMF9 (ENSRROG00000032805) ENSRROG00000042383 KCNJ9 (ENSRROG00000045425) IGSF8 (ENSRROG00000036784) ATP1A2 (ENSRROG00000033472) ATP1A4 (ENSRROG00000034817) CASQ1 (ENSRROG00000043167) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Macaca ANCESTRAL SPECIES ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Pig-tailed macaque MODERN SPECIES 262 OR6P1 (ENSMNEG00000000429) SPTA1 (ENSMNEG00000041794) OR6K3 (ENSMNEG00000037850) ENSMNEG00000031903 MNDA (ENSMNEG00000035719) PYHIN1 (ENSMNEG00000030344) PYDC5 (ENSMNEG00000044892) IFI16 (ENSMNEG00000038620) AIM2 (ENSMNEG00000030736) CADM3 (ENSMNEG00000034135) ACKR1 (ENSMNEG00000005830) FCER1A (ENSMNEG00000017791) OR10J3 (ENSMNEG00000042318) OR10J1 (ENSMNEG00000032157) OR10J5 (ENSMNEG00000037423) APCS (ENSMNEG00000042779) ##22 CRP (ENSMNEG00000043011) ##22 DUSP23 (ENSMNEG00000042678) FCRL6 (ENSMNEG00000039197) SLAMF8 (ENSMNEG00000031798) VSIG8 (ENSMNEG00000034921) CFAP45 (ENSMNEG00000001599) TAGLN2 (ENSMNEG00000045054) IGSF9 (ENSMNEG00000012260) SLAMF9 (ENSMNEG00000031100) ENSMNEG00000033308 KCNJ9 (ENSMNEG00000044649) IGSF8 (ENSMNEG00000026454) ATP1A2 (ENSMNEG00000035806) ATP1A4 (ENSMNEG00000032619) CASQ1 (ENSMNEG00000028911) Macaca_a ANCESTRAL SPECIES ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00940000162973.b ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000170471.A.b.b.a.a ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000005534.b.b.c.b.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 Rhesus MODERN SPECIES SPTA1 (ENSMMUG00000000730) OR6K2 (ENSMMUG00000000733) OR6K3 (ENSMMUG00000056001) ENSMMUG00000061549 OR6K6 (ENSMMUG00000050231) OR6N1 (ENSMMUG00000018450) OR6N2 (ENSMMUG00000059701) ENSMMUG00000060051 IFI16 (ENSMMUG00000004490) AIM2 (ENSMMUG00000004492) PYHIN1 (ENSMMUG00000004488) CADM3 (ENSMMUG00000001297) ACKR1 (ENSMMUG00000001300) FCER1A (ENSMMUG00000013428) ENSMMUG00000053632 APCS (ENSMMUG00000006685) ##22 CRP (ENSMMUG00000008922) ##22 DUSP23 (ENSMMUG00000018444) FCRL6 (ENSMMUG00000011335) SLAMF8 (ENSMMUG00000011338) VSIG8 (ENSMMUG00000011340) CFAP45 (ENSMMUG00000011342) ENSMMUG00000052448 TAGLN2 (ENSMMUG00000040609) IGSF9 (ENSMMUG00000004706) SLAMF9 (ENSMMUG00000004707) ENSMMUG00000052181 PIGM (ENSMMUG00000047089) KCNJ10 (ENSMMUG00000046470) ENSMMUG00000054927 KCNJ9 (ENSMMUG00000054510) Crab-eating macaque MODERN SPECIES ENSMFAG00000056676 ENSMFAG00000020370 OR10Z1 (ENSMFAG00000052036) SPTA1 (ENSMFAG00000029972) OR6K3 (ENSMFAG00000060908) ENSMFAG00000054001 OR6K6 (ENSMFAG00000050577) OR6N1 (ENSMFAG00000064922) OR6N2 (ENSMFAG00000064046) PYHIN1 (ENSMFAG00000000883) IFI16 (ENSMFAG00000041789) AIM2 (ENSMFAG00000031835) CADM3 (ENSMFAG00000024756) ACKR1 (ENSMFAG00000050751) FCER1A (ENSMFAG00000059830) APCS (ENSMFAG00000057662) ##22 CRP (ENSMFAG00000041764) ##22 DUSP23 (ENSMFAG00000043752) FCRL6 (ENSMFAG00000039265) SLAMF8 (ENSMFAG00000044324) VSIG8 (ENSMFAG00000003273) CFAP45 (ENSMFAG00000041889) ENSMFAG00000056485 TAGLN2 (ENSMFAG00000040025) IGSF9 (ENSMFAG00000000704) SLAMF9 (ENSMFAG00000044181) ENSMFAG00000063512 PIGM (ENSMFAG00000055275) KCNJ10 (ENSMFAG00000052965) ENSMFAG00000030757 IGSF8 (ENSMFAG00000036621) Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Cercopithecinae_d ANCESTRAL SPECIES 33 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000158895.c.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b ENSGT00910000146462 ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.`b.a ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Sooty mangabey MODERN SPECIES 144 OR10J1 (ENSCATG00000038190) OR10J5 (ENSCATG00000038110) APCS (ENSCATG00000030832) ##22 CRP (ENSCATG00000032411) ##22 DUSP23 (ENSCATG00000038538) FCRL6 (ENSCATG00000036471) SLAMF8 (ENSCATG00000044031) VSIG8 (ENSCATG00000044066) CFAP45 (ENSCATG00000042643) TAGLN2 (ENSCATG00000037697) IGSF9 (ENSCATG00000036216) SLAMF9 (ENSCATG00000016332) ENSCATG00000040133 KCNJ9 (ENSCATG00000025946) IGSF8 (ENSCATG00000031759) ATP1A2 (ENSCATG00000043418) ATP1A4 (ENSCATG00000036266) CASQ1 (ENSCATG00000031877) Drill MODERN SPECIES 101 PYHIN1 (ENSMLEG00000033042) PYDC5 (ENSMLEG00000030811) IFI16 (ENSMLEG00000034310) AIM2 (ENSMLEG00000036160) CADM3 (ENSMLEG00000031842) ACKR1 (ENSMLEG00000037235) FCER1A (ENSMLEG00000023927) OR10J3 (ENSMLEG00000034678) OR10J1 (ENSMLEG00000029571) OR10J5 (ENSMLEG00000029120) APCS (ENSMLEG00000039417) ##22 Olive baboon MODERN SPECIES 273 APCS (ENSPANG00000022214) ##22 Vervet Monkey MODERN SPECIES 12 OR10X1 (ENSCSAG00000000070) OR10Z1 (ENSCSAG00000002405) SPTA1 (ENSCSAG00000002429) OR6K3 (ENSCSAG00000000072) ENSCSAG00000002434 OR6K6 (ENSCSAG00000000073) OR6N1 (ENSCSAG00000000075) OR6N2 (ENSCSAG00000000077) MNDA (ENSCSAG00000002436) PYHIN1 (ENSCSAG00000002439) IFI16 (ENSCSAG00000002442) AIM2 (ENSCSAG00000002445) CADM3 (ENSCSAG00000002448) ACKR1 (ENSCSAG00000000079) FCER1A (ENSCSAG00000002450) APCS (ENSCSAG00000002457) ##22 CRP (ENSCSAG00000002458) ##22 DUSP23 (ENSCSAG00000002463) FCRL6 (ENSCSAG00000002469) SLAMF8 (ENSCSAG00000002478) VSIG8 (ENSCSAG00000002485) CFAP45 (ENSCSAG00000002489) ENSCSAG00000000081 TAGLN2 (ENSCSAG00000002493) IGSF9 (ENSCSAG00000002507) SLAMF9 (ENSCSAG00000002512) PIGM (ENSCSAG00000000083) KCNJ10 (ENSCSAG00000000085) KCNJ9 (ENSCSAG00000002515) IGSF8 (ENSCSAG00000002518) ATP1A2 (ENSCSAG00000002527) Platyrrhini ANCESTRAL SPECIES 12 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.b.d ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Cebidae ANCESTRAL SPECIES 12 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000163294 ENSGT00940000162973.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.b.d ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163973 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Cebidae_a ANCESTRAL SPECIES 6 ENSGT01100000263475.d.a.g.b.a ENSGT01100000263475.d.a.g.b.b.b ENSGT01100000263475.d.a.g.a.b ENSGT01100000263475.d.a.g.a.a ENSGT00940000154227.a.a.c.b ENSGT00940000161240 ENSGT00390000013296.a.b.a ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.b.d ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Capuchin MODERN SPECIES 313 CD1A (ENSCCAG00000025951) CD1C (ENSCCAG00000028935) CD1B (ENSCCAG00000034481) CD1E (ENSCCAG00000018004) OR10R2 (ENSCCAG00000036120) SPTA1 (ENSCCAG00000029933) MNDA (ENSCCAG00000033713) PYHIN1 (ENSCCAG00000029189) ENSCCAG00000029827 AIM2 (ENSCCAG00000014869) CADM3 (ENSCCAG00000033767) ACKR1 (ENSCCAG00000021032) FCER1A (ENSCCAG00000034456) OR10J3 (ENSCCAG00000034990) OR10J5 (ENSCCAG00000028466) APCS (ENSCCAG00000019709) ##22 CRP (ENSCCAG00000022081) ##22 DUSP23 (ENSCCAG00000021134) FCRL6 (ENSCCAG00000023320) SLAMF8 (ENSCCAG00000034074) VSIG8 (ENSCCAG00000025741) CFAP45 (ENSCCAG00000037549) ENSCCAG00000035859 IGSF9 (ENSCCAG00000037504) SLAMF9 (ENSCCAG00000030969) ENSCCAG00000036022 KCNJ9 (ENSCCAG00000028171) IGSF8 (ENSCCAG00000034717) ATP1A2 (ENSCCAG00000035348) ATP1A4 (ENSCCAG00000037154) CASQ1 (ENSCCAG00000035822) Bolivian squirrel monkey MODERN SPECIES 136 KIRREL1 (ENSSBOG00000029815) CD1D (ENSSBOG00000022846) CD1A (ENSSBOG00000025767) CD1C (ENSSBOG00000020594) CD1B (ENSSBOG00000022672) CD1E (ENSSBOG00000025378) SPTA1 (ENSSBOG00000027374) PYHIN1 (ENSSBOG00000032136) ENSSBOG00000025692 AIM2 (ENSSBOG00000021470) CADM3 (ENSSBOG00000022549) ACKR1 (ENSSBOG00000026604) FCER1A (ENSSBOG00000028978) ENSSBOG00000014650 ENSSBOG00000024023 ##22 APCS (ENSSBOG00000032545) ##22 CRP (ENSSBOG00000009126) ##22 DUSP23 (ENSSBOG00000028584) FCRL6 (ENSSBOG00000035509) SLAMF8 (ENSSBOG00000026112) VSIG8 (ENSSBOG00000028536) CFAP45 (ENSSBOG00000008535) TAGLN2 (ENSSBOG00000032060) IGSF9 (ENSSBOG00000024421) SLAMF9 (ENSSBOG00000020320) ENSSBOG00000029266 KCNJ9 (ENSSBOG00000036068) IGSF8 (ENSSBOG00000021162) ATP1A2 (ENSSBOG00000026209) CASQ1 (ENSSBOG00000033165) PEA15 (ENSSBOG00000024119) Marmoset MODERN SPECIES 9 OR6K3 (ENSCJAG00000042642) OR6K6 (ENSCJAG00000022042) ENSCJAG00000076227 OR6N1 (ENSCJAG00000022041) OR6N2 (ENSCJAG00000022040) ENSCJAG00000047539 ENSCJAG00000042581 AIM2 (ENSCJAG00000006327) ENSCJAG00000077884 CADM3 (ENSCJAG00000006307) ACKR1 (ENSCJAG00000006303) FCER1A (ENSCJAG00000006292) OR10J3 (ENSCJAG00000061455) OR10J1 (ENSCJAG00000022039) ENSCJAG00000052551 ##22 APCS (ENSCJAG00000006279) ##22 CRP (ENSCJAG00000006271) ##22 DUSP23 (ENSCJAG00000080143) SLAMF8 (ENSCJAG00000006239) VSIG8 (ENSCJAG00000006224) CFAP45 (ENSCJAG00000006175) TAGLN2 (ENSCJAG00000006156) IGSF9 (ENSCJAG00000006107) SLAMF9 (ENSCJAG00000006099) ATP1A2 (ENSCJAG00000006022) ENSCJAG00000044098 ENSCJAG00000074194 KCNJ9 (ENSCJAG00000006092) IGSF8 (ENSCJAG00000041164) ENSCJAG00000079945 CASQ1 (ENSCJAG00000073940) Mas night monkey MODERN SPECIES 1180 OR10T2 (ENSANAG00000001894) ENSANAG00000019947 ENSANAG00000036137 OR10R2 (ENSANAG00000022932) SPTA1 (ENSANAG00000032115) MNDA (ENSANAG00000030402) PYHIN1 (ENSANAG00000038212) ENSANAG00000026091 AIM2 (ENSANAG00000022336) CADM3 (ENSANAG00000024662) ACKR1 (ENSANAG00000022852) FCER1A (ENSANAG00000006240) OR10J3 (ENSANAG00000032701) ENSANAG00000025018 ENSANAG00000030797 ##22 APCS (ENSANAG00000025821) ##22 CRP (ENSANAG00000030906) ##22 ENSANAG00000036469 FCRL6 (ENSANAG00000030620) SLAMF8 (ENSANAG00000028983) CFAP45 (ENSANAG00000022146) TAGLN2 (ENSANAG00000034482) IGSF9 (ENSANAG00000029906) SLAMF9 (ENSANAG00000032660) ENSANAG00000001403 KCNJ9 (ENSANAG00000025048) IGSF8 (ENSANAG00000028885) ATP1A2 (ENSANAG00000034710) CASQ1 (ENSANAG00000036861) PEA15 (ENSANAG00000034320) ENSANAG00000035568 Tarsier MODERN SPECIES 5583 MNDA (ENSTSYG00000007989) PYHIN1 (ENSTSYG00000003931) CADM3 (ENSTSYG00000013962) ACKR1 (ENSTSYG00000030037) FCER1A (ENSTSYG00000000294) OR10J3 (ENSTSYG00000025823) OR10J5 (ENSTSYG00000002365) APCS (ENSTSYG00000013052) ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 7642 ENSTBEG00000006071 ##22 Tree shrew MODERN SPECIES 8320 ENSTBEG00000005259 ##22 Glires ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Rodentia ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Rodentia_A ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Sciuridae ANCESTRAL SPECIES ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Marmotini ANCESTRAL SPECIES 65 ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a.c ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Marmotini_b ANCESTRAL SPECIES 83 ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a.c ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Arctic ground squirrel MODERN SPECIES 374 ENSUPAG00010010906 ENSUPAG00010010907 MNDA (ENSUPAG00010010911) ENSUPAG00010010923 AIM2 (ENSUPAG00010010949) CADM3 (ENSUPAG00010010956) ACKR1 (ENSUPAG00010010982) ENSUPAG00010011002 FCER1A (ENSUPAG00010011012) OR10J3 (ENSUPAG00010011032) ENSUPAG00010011037 ENSUPAG00010011042 OR10J4 (ENSUPAG00010011048) OR10J1 (ENSUPAG00010011051) OR10J5 (ENSUPAG00010011055) APCS (ENSUPAG00010011064) ##22 CRP (ENSUPAG00010011065) ##22 DUSP23 (ENSUPAG00010011070) ENSUPAG00010011076 SLAMF8 (ENSUPAG00010011080) VSIG8 (ENSUPAG00010011083) CFAP45 (ENSUPAG00010011087) TAGLN2 (ENSUPAG00010011095) IGSF9 (ENSUPAG00010011102) SLAMF9 (ENSUPAG00010011119) PIGM (ENSUPAG00010011124) KCNJ10 (ENSUPAG00010011125) KCNJ9 (ENSUPAG00010011126) IGSF8 (ENSUPAG00010011130) ATP1A4 (ENSUPAG00010011137) CASQ1 (ENSUPAG00010011189) Squirrel MODERN SPECIES 340 OR6K6 (ENSSTOG00000008031) OR6N1 (ENSSTOG00000028298) OR6N2 (ENSSTOG00000008055) MNDA (ENSSTOG00000027408) ENSSTOG00000034795 AIM2 (ENSSTOG00000008132) CADM3 (ENSSTOG00000025214) ACKR1 (ENSSTOG00000032562) ENSSTOG00000033220 ##22 ENSSTOG00000004550 ENSSTOG00000014023 OR10J3 (ENSSTOG00000004564) OR10J4 (ENSSTOG00000021702) OR10J1 (ENSSTOG00000004574) OR10J5 (ENSSTOG00000004580) APCS (ENSSTOG00000022183) ##22 CRP (ENSSTOG00000024783) ##22 SLAMF8 (ENSSTOG00000007395) VSIG8 (ENSSTOG00000007410) CFAP45 (ENSSTOG00000007432) TAGLN2 (ENSSTOG00000028012) IGSF9 (ENSSTOG00000027707) SLAMF9 (ENSSTOG00000007452) PIGM (ENSSTOG00000021767) KCNJ10 (ENSSTOG00000014095) KCNJ9 (ENSSTOG00000022007) IGSF8 (ENSSTOG00000025797) ATP1A2 (ENSSTOG00000007480) ATP1A4 (ENSSTOG00000007516) CASQ1 (ENSSTOG00000027089) PEA15 (ENSSTOG00000007575) Alpin marmot MODERN SPECIES 29 ENSMMMG00000022524 MNDA (ENSMMMG00000022517) ENSMMMG00000022510 ENSMMMG00000022507 AIM2 (ENSMMMG00000022506) CADM3 (ENSMMMG00000022492) ACKR1 (ENSMMMG00000022488) ENSMMMG00000022481 FCER1A (ENSMMMG00000022479) OR10J3 (ENSMMMG00000022477) ENSMMMG00000022475 ENSMMMG00000022473 OR10J4 (ENSMMMG00000022466) OR10J1 (ENSMMMG00000022465) OR10J5 (ENSMMMG00000022442) APCS (ENSMMMG00000022435) ##22 CRP (ENSMMMG00000022433) ##22 DUSP23 (ENSMMMG00000022422) ENSMMMG00000022417 SLAMF8 (ENSMMMG00000022412) VSIG8 (ENSMMMG00000022406) CFAP45 (ENSMMMG00000022400) TAGLN2 (ENSMMMG00000022397) IGSF9 (ENSMMMG00000022380) SLAMF9 (ENSMMMG00000022379) PIGM (ENSMMMG00000022376) KCNJ10 (ENSMMMG00000022374) KCNJ9 (ENSMMMG00000022367) IGSF8 (ENSMMMG00000022358) ATP1A2 (ENSMMMG00000022340) ENSMMMG00000022329 Eurasian red squirrel MODERN SPECIES OR6N2 (ENSSVLG00005006006) ENSSVLG00005006027 ENSSVLG00005006039 ENSSVLG00005006138 AIM2 (ENSSVLG00005006635) CADM3 (ENSSVLG00005006700) ACKR1 (ENSSVLG00005006823) ENSSVLG00005006859 FCER1A (ENSSVLG00005006869) OR10J3 (ENSSVLG00005006899) ENSSVLG00005006907 ENSSVLG00005006925 OR10J4 (ENSSVLG00005006948) OR10J1 (ENSSVLG00005006957) OR10J5 (ENSSVLG00005006978) APCS (ENSSVLG00005006996) ##22 CRP (ENSSVLG00005007022) ##22 DUSP23 (ENSSVLG00005007049) ENSSVLG00005007083 VSIG8 (ENSSVLG00005007137) ENSSVLG00005007193 CFAP45 (ENSSVLG00005007226) TAGLN2 (ENSSVLG00005007297) IGSF9 (ENSSVLG00005007334) SLAMF9 (ENSSVLG00005007532) ENSSVLG00005007587 KCNJ9 (ENSSVLG00005007621) IGSF8 (ENSSVLG00005007653) ATP1A2 (ENSSVLG00005007734) ATP1A4 (ENSSVLG00005008010) CASQ1 (ENSSVLG00005008157) Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.b ENSGT00940000163654 ENSGT00940000162870.e.a ENSGT00940000163968 ENSGT00940000165113 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.a ENSGT00940000162870.e.b ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000165113 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Hystricomorpha_b ANCESTRAL SPECIES 8 ENSGT00940000162983 ENSGT00940000161240 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.e.a ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a ENSGT00390000000230 Long-tailed chinchilla MODERN SPECIES 175 OR10Z1 (ENSCLAG00000017848) SPTA1 (ENSCLAG00000013250) ENSCLAG00000017851 ENSCLAG00000017875 OR6K6 (ENSCLAG00000017779) OR6N1 (ENSCLAG00000017922) OR6N2 (ENSCLAG00000017826) ENSCLAG00000018025 ENSCLAG00000011827 CADM3 (ENSCLAG00000011984) ACKR1 (ENSCLAG00000012793) ENSCLAG00000013233 ##22 ENSCLAG00000017841 FCER1A (ENSCLAG00000013176) OR10J3 (ENSCLAG00000017924) APCS (ENSCLAG00000013265) ##22 DUSP23 (ENSCLAG00000013049) SLAMF8 (ENSCLAG00000014996) VSIG8 (ENSCLAG00000015894) CFAP45 (ENSCLAG00000013119) TAGLN2 (ENSCLAG00000015785) IGSF9 (ENSCLAG00000013469) SLAMF9 (ENSCLAG00000014897) PIGM (ENSCLAG00000017954) KCNJ10 (ENSCLAG00000017311) KCNJ9 (ENSCLAG00000012616) IGSF8 (ENSCLAG00000011758) ATP1A2 (ENSCLAG00000012804) ATP1A4 (ENSCLAG00000012810) CASQ1 (ENSCLAG00000016275) PEA15 (ENSCLAG00000016388) Degu MODERN SPECIES 157 SPTA1 (ENSODEG00000011975) ENSODEG00000019839 ENSODEG00000010408 ENSODEG00000012962 ENSODEG00000008976 ENSODEG00000008520 CADM3 (ENSODEG00000008092) ACKR1 (ENSODEG00000009370) ENSODEG00000008544 ENSODEG00000010881 ##22 ENSODEG00000011465 ENSODEG00000019581 ENSODEG00000008155 APCS (ENSODEG00000007873) ##22 ENSODEG00000008105 DUSP23 (ENSODEG00000008041) SLAMF8 (ENSODEG00000007757) VSIG8 (ENSODEG00000008970) CFAP45 (ENSODEG00000009032) IGSF9 (ENSODEG00000008294) SLAMF9 (ENSODEG00000008986) PIGM (ENSODEG00000019551) KCNJ10 (ENSODEG00000008231) KCNJ9 (ENSODEG00000009424) IGSF8 (ENSODEG00000011607) ATP1A2 (ENSODEG00000009923) ATP1A4 (ENSODEG00000009334) CASQ1 (ENSODEG00000007881) PEA15 (ENSODEG00000008919) Guinea pig MODERN SPECIES 56 ENSCPOG00000038713 ENSCPOG00000021677 OR6K6 (ENSCPOG00000015473) OR6N2 (ENSCPOG00000004259) ENSCPOG00000008779 ENSCPOG00000008556 ENSCPOG00000025018 CADM3 (ENSCPOG00000010800) ACKR1 (ENSCPOG00000024213) ENSCPOG00000026658 ##22 ENSCPOG00000006414 OR10J3 (ENSCPOG00000037408) ENSCPOG00000032628 ENSCPOG00000023288 OR10J4 (ENSCPOG00000025720) APCS (ENSCPOG00000009766) ##22 CRP (ENSCPOG00000013154) ##22 DUSP23 (ENSCPOG00000034085) ENSCPOG00000020521 SLAMF8 (ENSCPOG00000036904) VSIG8 (ENSCPOG00000003207) CFAP45 (ENSCPOG00000004457) TAGLN2 (ENSCPOG00000027416) IGSF9 (ENSCPOG00000004460) SLAMF9 (ENSCPOG00000007992) PIGM (ENSCPOG00000003787) KCNJ10 (ENSCPOG00000039801) KCNJ9 (ENSCPOG00000023593) IGSF8 (ENSCPOG00000024002) ATP1A2 (ENSCPOG00000014903) ATP1A4 (ENSCPOG00000032779) Naked mole-rat female MODERN SPECIES 20 ENSHGLG00000042055 ENSHGLG00000006982 ENSHGLG00000036410 ENSHGLG00000035317 ENSHGLG00000021284 ENSHGLG00000043082 ENSHGLG00000009754 CADM3 (ENSHGLG00000006499) ACKR1 (ENSHGLG00000047411) ENSHGLG00000010350 ##22 ENSHGLG00000020531 FCER1A (ENSHGLG00000007498) ENSHGLG00000043592 ENSHGLG00000040096 OR10J4 (ENSHGLG00000020816) APCS (ENSHGLG00000047260) ##22 CRP (ENSHGLG00000015003) ##22 ENSHGLG00000047194 DUSP23 (ENSHGLG00000037025) SLAMF8 (ENSHGLG00000041257) VSIG8 (ENSHGLG00000008875) CFAP45 (ENSHGLG00000007235) ENSHGLG00000006396 IGSF9 (ENSHGLG00000014869) SLAMF9 (ENSHGLG00000014754) PIGM (ENSHGLG00000020908) KCNJ10 (ENSHGLG00000035959) KCNJ9 (ENSHGLG00000015357) IGSF8 (ENSHGLG00000017599) ATP1A2 (ENSHGLG00000015210) ATP1A4 (ENSHGLG00000018340) Rodentia_B ANCESTRAL SPECIES ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Myomorpha ANCESTRAL SPECIES 16 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Muroidea ANCESTRAL SPECIES 9 ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Muroidea_A ANCESTRAL SPECIES 12 ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.f.b ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Cricetidae ANCESTRAL SPECIES 13 ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Cricetidae_B ANCESTRAL SPECIES 8 ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Northern American deer mouse MODERN SPECIES 2 ENSPEMG00000021482 ENSPEMG00000009093 ENSPEMG00000028701 ENSPEMG00000005047 ENSPEMG00000017606 Cadm3 (ENSPEMG00000003579) Ackr1 (ENSPEMG00000017601) ENSPEMG00000013567 ##22 Or10j2 (ENSPEMG00000001739) Fcer1a (ENSPEMG00000016296) Or10j3b (ENSPEMG00000024812) Or10j3 (ENSPEMG00000029514) ENSPEMG00000014050 ENSPEMG00000002551 Or10j5 (ENSPEMG00000001889) Apcs (ENSPEMG00000017741) ##22 Crp (ENSPEMG00000024726) ##22 Dusp23 (ENSPEMG00000011195) Slamf8 (ENSPEMG00000015798) Vsig8 (ENSPEMG00000009137) Cfap45 (ENSPEMG00000016692) Tagln2 (ENSPEMG00000010399) Igsf9 (ENSPEMG00000011335) Slamf9 (ENSPEMG00000009321) Pigm (ENSPEMG00000004635) Kcnj10 (ENSPEMG00000028152) Kcnj9 (ENSPEMG00000014733) Igsf8 (ENSPEMG00000017176) Atp1a2 (ENSPEMG00000013238) Atp1a4 (ENSPEMG00000000606) Casq1 (ENSPEMG00000011466) Prairie vole MODERN SPECIES 118 ENSMOCG00000001731 Or6k4 (ENSMOCG00000003407) Or6k6 (ENSMOCG00000002933) Or6n2 (ENSMOCG00000002377) ENSMOCG00000001010 ENSMOCG00000021059 ENSMOCG00000014760 ENSMOCG00000019015 Aim2 (ENSMOCG00000018788) Cadm3 (ENSMOCG00000009497) Ackr1 (ENSMOCG00000014680) ENSMOCG00000015105 ##22 Fcer1a (ENSMOCG00000017859) ENSMOCG00000002640 Or10j5 (ENSMOCG00000002391) Apcs (ENSMOCG00000015189) ##22 Crp (ENSMOCG00000021079) ##22 Dusp23 (ENSMOCG00000021329) Slamf8 (ENSMOCG00000008354) Vsig8 (ENSMOCG00000016054) Cfap45 (ENSMOCG00000008042) Tagln2 (ENSMOCG00000014146) Igsf9 (ENSMOCG00000000988) Slamf9 (ENSMOCG00000014177) Pigm (ENSMOCG00000001955) Kcnj10 (ENSMOCG00000015793) Kcnj9 (ENSMOCG00000017119) Igsf8 (ENSMOCG00000007929) Atp1a2 (ENSMOCG00000001569) Atp1a4 (ENSMOCG00000016552) Casq1 (ENSMOCG00000003428) Cricetinae ANCESTRAL SPECIES 4 ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654 ENSGT00940000163968 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Golden Hamster MODERN SPECIES 697 Or6k2 (ENSMAUG00000018299) Or6k8-ps1 (ENSMAUG00000018076) Or6k6 (ENSMAUG00000018183) Or6n2 (ENSMAUG00000018276) ENSMAUG00000001345 ENSMAUG00000004249 ENSMAUG00000010132 ENSMAUG00000012460 Aim2 (ENSMAUG00000012690) Cadm3 (ENSMAUG00000015645) Ackr1 (ENSMAUG00000015131) ENSMAUG00000015197 ##22 Fcer1a (ENSMAUG00000016317) ENSMAUG00000018501 Or10j5 (ENSMAUG00000001340) Apcs (ENSMAUG00000011083) ##22 Crp (ENSMAUG00000012308) ##22 Dusp23 (ENSMAUG00000012353) Fcrl6 (ENSMAUG00000012715) Slamf8 (ENSMAUG00000013303) Vsig8 (ENSMAUG00000013550) Cfap45 (ENSMAUG00000014684) Tagln2 (ENSMAUG00000015755) Igsf9 (ENSMAUG00000016697) Slamf9 (ENSMAUG00000002531) Pigm (ENSMAUG00000002040) Kcnj10 (ENSMAUG00000003384) Kcnj9 (ENSMAUG00000004618) Igsf8 (ENSMAUG00000005168) Atp1a2 (ENSMAUG00000009483) Atp1a4 (ENSMAUG00000013532) Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001021135 ENSCGRG00001024308 ENSCGRG00001024890 Aim2 (ENSCGRG00001014376) Cadm3 (ENSCGRG00001025045) Ackr1 (ENSCGRG00001021594) ENSCGRG00001002954 ##22 Or10j2 (ENSCGRG00001012095) Fcer1a (ENSCGRG00001011286) Or10j3b (ENSCGRG00001012422) Or10j3 (ENSCGRG00001001033) ENSCGRG00001012729 ENSCGRG00001012248 ENSCGRG00001012364 Or10j5 (ENSCGRG00001002194) Apcs (ENSCGRG00001024627) ##22 Crp (ENSCGRG00001024968) ##22 Dusp23 (ENSCGRG00001025037) ENSCGRG00001025048 Slamf8 (ENSCGRG00001019455) Vsig8 (ENSCGRG00001023265) Cfap45 (ENSCGRG00001013630) ENSCGRG00001018057 Igsf9 (ENSCGRG00001020689) Slamf9 (ENSCGRG00001018988) Pigm (ENSCGRG00001004342) Kcnj10 (ENSCGRG00001003433) Kcnj9 (ENSCGRG00001000969) Igsf8 (ENSCGRG00001018298) Atp1a2 (ENSCGRG00001009182) Atp1a4 (ENSCGRG00001019614) Murinae ANCESTRAL SPECIES 11 ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.f.b ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Mus ANCESTRAL SPECIES 5 ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Mus_A ANCESTRAL SPECIES 5 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Ryukyu mouse MODERN SPECIES MGP_CAROLIEiJ_G0014919 MGP_CAROLIEiJ_G0014920 MGP_CAROLIEiJ_G0014918 MGP_CAROLIEiJ_G0014917 MGP_CAROLIEiJ_G0014916 Aim2 (MGP_CAROLIEiJ_G0014915) Cadm3 (MGP_CAROLIEiJ_G0014914) Ackr1 (MGP_CAROLIEiJ_G0014913) Or10j2 (MGP_CAROLIEiJ_G0014912) Fcer1a (MGP_CAROLIEiJ_G0014911) Or10j3b (MGP_CAROLIEiJ_G0014910) Or10j3 (MGP_CAROLIEiJ_G0014909) Or10j7 (MGP_CAROLIEiJ_G0014908) Or10j27 (MGP_CAROLIEiJ_G0014907) Or10j5 (MGP_CAROLIEiJ_G0014906) Apcs (MGP_CAROLIEiJ_G0014905) ##22 Crp (MGP_CAROLIEiJ_G0014904) ##22 Dusp23 (MGP_CAROLIEiJ_G0014903) Fcrl6 (MGP_CAROLIEiJ_G0014902) Slamf8 (MGP_CAROLIEiJ_G0014901) Vsig8 (MGP_CAROLIEiJ_G0014900) Cfap45 (MGP_CAROLIEiJ_G0014899) Tagln2 (MGP_CAROLIEiJ_G0014898) Igsf9 (MGP_CAROLIEiJ_G0014897) MGP_CAROLIEiJ_G0014896 Pigm (MGP_CAROLIEiJ_G0014895) Kcnj10 (MGP_CAROLIEiJ_G0014894) Kcnj9 (MGP_CAROLIEiJ_G0014893) Atp1a2 (MGP_CAROLIEiJ_G0014892) Igsf8 (MGP_CAROLIEiJ_G0014891) Atp1a4 (MGP_CAROLIEiJ_G0014890) Mus_B ANCESTRAL SPECIES 7 ENSGT00390000013296.a.b.a.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Mouse MODERN SPECIES Ifi209 (ENSMUSG00000043263) Ifi213 (ENSMUSG00000073491) Ifi214 (ENSMUSG00000070501) Ifi206 (ENSMUSG00000037849) Aim2 (ENSMUSG00000037860) Cadm3 (ENSMUSG00000005338) Ackr1 (ENSMUSG00000037872) Mptx2 (ENSMUSG00000079180) ##22 Or10j2 (ENSMUSG00000049605) Fcer1a (ENSMUSG00000005339) Or10j3b (ENSMUSG00000049456) Or10j3 (ENSMUSG00000046643) Or10j7 (ENSMUSG00000058981) Or10j27 (ENSMUSG00000062527) Or10j5 (ENSMUSG00000037924) Apcs (ENSMUSG00000026542) ##22 Crp (ENSMUSG00000037942) ##22 Dusp23 (ENSMUSG00000026544) Fcrl6 (ENSMUSG00000070504) Slamf8 (ENSMUSG00000053318) Vsig8 (ENSMUSG00000049598) Cfap45 (ENSMUSG00000026546) Tagln2 (ENSMUSG00000026547) Igsf9 (ENSMUSG00000037995) Slamf9 (ENSMUSG00000026548) Pigm (ENSMUSG00000050229) Kcnj10 (ENSMUSG00000044708) Kcnj9 (ENSMUSG00000038026) Atp1a2 (ENSMUSG00000007097) Igsf8 (ENSMUSG00000038034) Atp1a4 (ENSMUSG00000007107) Mus_C ANCESTRAL SPECIES 1 ENSGT00390000018908.a.a ENSGT00390000013296.a.a.e.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870.d ENSGT00940000162870.c ENSGT00940000163654.c ENSGT00940000163654.d ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.D.gb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 spretus MODERN SPECIES Or10aa3 (MGP_SPRETEiJ_G0015727) Or10aa1 (MGP_SPRETEiJ_G0015726) Ifi202b (MGP_SPRETEiJ_G0015725) MGP_SPRETEiJ_G0015724 MGP_SPRETEiJ_G0015720 Cadm3 (MGP_SPRETEiJ_G0015719) Ackr1 (MGP_SPRETEiJ_G0015718) Mptx2 (MGP_SPRETEiJ_G0015717) ##22 MGP_SPRETEiJ_G0015716 Fcer1a (MGP_SPRETEiJ_G0015715) Or10j3b (MGP_SPRETEiJ_G0015714) MGP_SPRETEiJ_G0015713 Or10j7 (MGP_SPRETEiJ_G0015712) Or10j27 (MGP_SPRETEiJ_G0015711) Or10j5 (MGP_SPRETEiJ_G0015710) Apcs (MGP_SPRETEiJ_G0015709) ##22 Crp (MGP_SPRETEiJ_G0015708) ##22 Dusp23 (MGP_SPRETEiJ_G0015707) Fcrl6 (MGP_SPRETEiJ_G0015706) Slamf8 (MGP_SPRETEiJ_G0015705) Vsig8 (MGP_SPRETEiJ_G0015704) Cfap45 (MGP_SPRETEiJ_G0015703) Tagln2 (MGP_SPRETEiJ_G0015702) Igsf9 (MGP_SPRETEiJ_G0015701) Slamf9 (MGP_SPRETEiJ_G0015700) Pigm (MGP_SPRETEiJ_G0015699) Kcnj10 (MGP_SPRETEiJ_G0015698) Kcnj9 (MGP_SPRETEiJ_G0015697) Atp1a2 (MGP_SPRETEiJ_G0015696) Atp1a4 (MGP_SPRETEiJ_G0015694) Casq1 (MGP_SPRETEiJ_G0015693) Steppe mouse MODERN SPECIES 2732 ENSMSIG00000031997 Aim2 (ENSMSIG00000031998) ENSMSIG00000031999 Ifi209 (ENSMSIG00000032000) ENSMSIG00000032001 ENSMSIG00000032002 Ackr1 (ENSMSIG00000032003) Mptx2 (ENSMSIG00000032006) ##22 ENSMSIG00000032007 Fcer1a (ENSMSIG00000032010) Or10j3b (ENSMSIG00000032011) Or10j3 (ENSMSIG00000032012) Or10j7 (ENSMSIG00000032013) Or10j27 (ENSMSIG00000032014) Or10j5 (ENSMSIG00000032015) Apcs (ENSMSIG00000032017) ##22 Dusp23 (ENSMSIG00000032021) Shrew mouse MODERN SPECIES 18 Ifi209 (MGP_PahariEiJ_G0028158) Ifi214 (MGP_PahariEiJ_G0028157) MGP_PahariEiJ_G0028156 MGP_PahariEiJ_G0028155 MGP_PahariEiJ_G0028154 MGP_PahariEiJ_G0028153 Cadm3 (MGP_PahariEiJ_G0028152) Ackr1 (MGP_PahariEiJ_G0028151) MGP_PahariEiJ_G0028150 ##22 MGP_PahariEiJ_G0028149 ##22 Or10j2 (MGP_PahariEiJ_G0028148) Or10j3b (MGP_PahariEiJ_G0028147) Or10j7 (MGP_PahariEiJ_G0028146) Or10j27 (MGP_PahariEiJ_G0028145) Or10j5 (MGP_PahariEiJ_G0028143) Apcs (MGP_PahariEiJ_G0028142) ##22 Crp (MGP_PahariEiJ_G0028141) ##22 Dusp23 (MGP_PahariEiJ_G0028140) MGP_PahariEiJ_G0028139 Slamf8 (MGP_PahariEiJ_G0028138) Vsig8 (MGP_PahariEiJ_G0028137) Cfap45 (MGP_PahariEiJ_G0028136) Tagln2 (MGP_PahariEiJ_G0028135) Igsf9 (MGP_PahariEiJ_G0028134) Slamf9 (MGP_PahariEiJ_G0028133) Pigm (MGP_PahariEiJ_G0028132) Kcnj10 (MGP_PahariEiJ_G0028131) Kcnj9 (MGP_PahariEiJ_G0028130) Atp1a2 (MGP_PahariEiJ_G0028129) Igsf8 (MGP_PahariEiJ_G0028128) Atp1a4 (MGP_PahariEiJ_G0028127) Rat MODERN SPECIES 4 Olr1585 (ENSRNOG00000064497) ENSRNOG00000069878 RGD1562462 (ENSRNOG00000065043) LOC102556096 (ENSRNOG00000065208) Aim2 (ENSRNOG00000003480) Cadm3 (ENSRNOG00000003365) Ackr1 (ENSRNOG00000069330) Mptx1 (ENSRNOG00000046165) ##22 Or10j2 (ENSRNOG00000049477) Fcer1a (ENSRNOG00000009177) Or10j3b (ENSRNOG00000067763) Or10j3 (ENSRNOG00000062538) Or10j27 (ENSRNOG00000064146) Or10j7 (ENSRNOG00000064078) Or10j5 (ENSRNOG00000009141) Apcs (ENSRNOG00000009086) ##22 LOC108348980 (ENSRNOG00000028939) Crp (ENSRNOG00000000053) Dusp23 (ENSRNOG00000022143) Fcrl6 (ENSRNOG00000000055) Slamf8 (ENSRNOG00000008736) Vsig8 (ENSRNOG00000008668) Cfap45 (ENSRNOG00000008492) Tagln2 (ENSRNOG00000008301) Igsf9 (ENSRNOG00000008054) Slamf9 (ENSRNOG00000008045) Pigm (ENSRNOG00000007735) Kcnj10 (ENSRNOG00000068444) Kcnj9 (ENSRNOG00000007645) Igsf8 (ENSRNOG00000007604) Atp1a2 (ENSRNOG00000007290) Lesser Egyptian jerboa MODERN SPECIES 199 Fmn2 (ENSJJAG00000021282) ENSJJAG00000000475 Spta1 (ENSJJAG00000006211) ENSJJAG00000015438 Aim2 (ENSJJAG00000019224) Cadm3 (ENSJJAG00000022014) Ackr1 (ENSJJAG00000022885) Fcer1a (ENSJJAG00000003143) ENSJJAG00000013735 Apcs (ENSJJAG00000013862) ##22 Crp (ENSJJAG00000003997) ##22 Dusp23 (ENSJJAG00000009910) Slamf8 (ENSJJAG00000010665) Vsig8 (ENSJJAG00000011307) Cfap45 (ENSJJAG00000012021) Tagln2 (ENSJJAG00000013181) Igsf9 (ENSJJAG00000016571) Slamf9 (ENSJJAG00000017960) Pigm (ENSJJAG00000013216) Kcnj10 (ENSJJAG00000000220) Kcnj9 (ENSJJAG00000000650) Igsf8 (ENSJJAG00000009719) Atp1a2 (ENSJJAG00000017505) Atp1a4 (ENSJJAG00000018895) Casq1 (ENSJJAG00000022031) Kangaroo rat MODERN SPECIES 450 Fcrl1 (ENSDORG00000015350) Cd5l (ENSDORG00000015348) Fcrls (ENSDORG00000029618) Kirrel (ENSDORG00000006781) ENSDORG00000023523 Or10k2 (ENSDORG00000006909) ENSDORG00000013579 ENSDORG00000023576 Spta1 (ENSDORG00000016657) ENSDORG00000025844 Cadm3 (ENSDORG00000007812) Ackr1 (ENSDORG00000007815) ENSDORG00000006655 ##22 ENSDORG00000026308 ENSDORG00000008016 Apcs (ENSDORG00000005557) ##22 Crp (ENSDORG00000003120) ##22 Dusp23 (ENSDORG00000025635) Slamf8 (ENSDORG00000003126) Vsig8 (ENSDORG00000009694) Cfap45 (ENSDORG00000010843) Tagln2 (ENSDORG00000010844) Igsf9 (ENSDORG00000010846) Pigm (ENSDORG00000011680) Kcnj10 (ENSDORG00000011681) Kcnj9 (ENSDORG00000026272) Igsf8 (ENSDORG00000007975) Atp1a2 (ENSDORG00000025124) ENSDORG00000023846 ENSDORG00000026888 Casq1 (ENSDORG00000013062) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00940000162973.b ENSGT00940000164490 ENSGT00940000163011 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00940000159779 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163968 ENSGT00940000165113 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Rabbit MODERN SPECIES 4 OR6K6 (ENSOCUG00000017697) OR6N1 (ENSOCUG00000017695) OR6N2 (ENSOCUG00000010597) ENSOCUG00000033250 ENSOCUG00000036381 MNDA (ENSOCUG00000024795) CADM3 (ENSOCUG00000016385) ENSOCUG00000031386 FCER1A (ENSOCUG00000022947) OR10J3 (ENSOCUG00000015476) ENSOCUG00000033994 OR10J4 (ENSOCUG00000021643) OR10J1 (ENSOCUG00000000350) ENSOCUG00000021322 OR10J5 (ENSOCUG00000011962) APCS (ENSOCUG00000014365) ##22 CRP (ENSOCUG00000004702) ##22 DUSP23 (ENSOCUG00000015831) ENSOCUG00000021578 SLAMF8 (ENSOCUG00000002338) VSIG8 (ENSOCUG00000002342) CFAP45 (ENSOCUG00000002349) TAGLN2 (ENSOCUG00000022296) IGSF9 (ENSOCUG00000002356) SLAMF9 (ENSOCUG00000002366) ENSOCUG00000027503 PIGM (ENSOCUG00000015291) KCNJ10 (ENSOCUG00000011928) KCNJ9 (ENSOCUG00000038517) IGSF8 (ENSOCUG00000023058) ATP1A2 (ENSOCUG00000017667) Pika MODERN SPECIES 1174 APCS (ENSOPRG00000008348) ##22 Atlantogenata ANCESTRAL SPECIES 15 ENSGT00940000164490 ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00390000013296.b ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000159272.A ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 Xenarthra ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 Sloth MODERN SPECIES 8305 APCS (ENSCHOG00000000638) ##22 Afrotheria ANCESTRAL SPECIES 87 ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Afrotheria_a ANCESTRAL SPECIES 89 ENSGT00940000163011 ENSGT00940000164490 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00390000018908.a.b ENSGT00390000018908.a.a ENSGT00390000013296.a.b.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT01050000244808.A.b.a.b ENSGT00940000162870 ENSGT00940000163654 ENSGT00940000163973 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000161329 ENSGT01050000244808.A.a ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00390000017728 ENSGT00990000203615.b.a.a.a.a ENSGT00940000161314 ENSGT00940000159936 ENSGT00940000162378 ENSGT00390000019377.a Elephant MODERN SPECIES 325 ENSLAFG00000021649 OR6N1 (ENSLAFG00000014379) OR6N2 (ENSLAFG00000011136) ENSLAFG00000032373 ENSLAFG00000001038 MNDA (ENSLAFG00000002774) CADM3 (ENSLAFG00000005683) ACKR1 (ENSLAFG00000031828) ENSLAFG00000020848 ##22 FCER1A (ENSLAFG00000004222) ENSLAFG00000030660 ENSLAFG00000025733 ENSLAFG00000031436 OR10J1 (ENSLAFG00000014770) OR10J5 (ENSLAFG00000021971) APCS (ENSLAFG00000030778) ##22 CRP (ENSLAFG00000029698) ##22 DUSP23 (ENSLAFG00000014105) ENSLAFG00000026692 SLAMF8 (ENSLAFG00000001163) VSIG8 (ENSLAFG00000007599) CFAP45 (ENSLAFG00000004137) TAGLN2 (ENSLAFG00000020779) IGSF9 (ENSLAFG00000030174) SLAMF9 (ENSLAFG00000023241) PIGM (ENSLAFG00000000484) KCNJ10 (ENSLAFG00000022248) IGSF8 (ENSLAFG00000000487) ATP1A2 (ENSLAFG00000000490) ATP1A4 (ENSLAFG00000000495) CASQ1 (ENSLAFG00000006462) Hyrax MODERN SPECIES 8827 APCS (ENSPCAG00000000542) ##22 Tenrec MODERN SPECIES 17838 APCS (ENSETEG00000010285) ##22 Theria ANCESTRAL SPECIES 3 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164179 Eutheria ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Boreoeutheria ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Euarchontoglires ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Primates ANCESTRAL SPECIES 7 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a Haplorrhini ANCESTRAL SPECIES 7 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a Simiiformes ANCESTRAL SPECIES 8 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a Catarrhini ANCESTRAL SPECIES 10 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Hominoidea ANCESTRAL SPECIES 7 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Hominidae ANCESTRAL SPECIES 6 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Gorilla MODERN SPECIES ENSGGOG00000037038 ENSGGOG00000041014 DCAF8 (ENSGGOG00000013028) ENSGGOG00000036406 PEA15 (ENSGGOG00000013024) CASQ1 (ENSGGOG00000014642) ATP1A4 (ENSGGOG00000013011) ATP1A2 (ENSGGOG00000004949) IGSF8 (ENSGGOG00000004944) KCNJ9 (ENSGGOG00000025489) PIGM (ENSGGOG00000028160) ENSGGOG00000025860 ENSGGOG00000039506 ENSGGOG00000042828 DUSP23 (ENSGGOG00000014958) CRP (ENSGGOG00000025795) ##22 APCS (ENSGGOG00000001492) ##22 OR10J5 (ENSGGOG00000003035) OR10J1 (ENSGGOG00000040483) ENSGGOG00000038043 ENSGGOG00000037710 OR10J3 (ENSGGOG00000003857) FCER1A (ENSGGOG00000021999) ACKR1 (ENSGGOG00000005139) CADM3 (ENSGGOG00000005133) AIM2 (ENSGGOG00000006135) IFI16 (ENSGGOG00000006123) PYDC5 (ENSGGOG00000040558) PYHIN1 (ENSGGOG00000012392) MNDA (ENSGGOG00000005937) ENSGGOG00000005806 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a Pan ANCESTRAL SPECIES ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Chimpanzee MODERN SPECIES PEA15 (ENSPTRG00000001545) CASQ1 (ENSPTRG00000001544) ATP1A4 (ENSPTRG00000001542) ATP1A2 (ENSPTRG00000048477) IGSF8 (ENSPTRG00000001539) KCNJ9 (ENSPTRG00000001538) ENSPTRG00000048956 SLAMF9 (ENSPTRG00000001535) IGSF9 (ENSPTRG00000023194) TAGLN2 (ENSPTRG00000001533) CFAP45 (ENSPTRG00000034223) VSIG8 (ENSPTRG00000001531) SLAMF8 (ENSPTRG00000001530) FCRL6 (ENSPTRG00000001529) DUSP23 (ENSPTRG00000001528) CRP (ENSPTRG00000001527) ##22 APCS (ENSPTRG00000001525) ##22 OR10J5 (ENSPTRG00000001522) ENSPTRG00000045894 FCER1A (ENSPTRG00000001523) ACKR1 (ENSPTRG00000001521) CADM3 (ENSPTRG00000001520) AIM2 (ENSPTRG00000001519) IFI16 (ENSPTRG00000001518) PYDC5 (ENSPTRG00000045743) PYHIN1 (ENSPTRG00000001517) MNDA (ENSPTRG00000001515) ENSPTRG00000043226 OR6N2 (ENSPTRG00000030369) OR6N1 (ENSPTRG00000030370) OR6K6 (ENSPTRG00000001513) Human MODERN SPECIES CASQ1 (ENSG00000143318) ATP1A4 (ENSG00000132681) ATP1A2 (ENSG00000018625) IGSF8 (ENSG00000162729) KCNJ9 (ENSG00000162728) PIGM (ENSG00000143315) KCNJ10 (ENSG00000177807) SLAMF9 (ENSG00000162723) IGSF9 (ENSG00000085552) TAGLN2 (ENSG00000158710) CFAP45 (ENSG00000213085) VSIG8 (ENSG00000243284) SLAMF8 (ENSG00000158714) FCRL6 (ENSG00000181036) DUSP23 (ENSG00000158716) CRP (ENSG00000132693) ##22 APCS (ENSG00000132703) ##22 OR10J5 (ENSG00000184155) OR10J1 (ENSG00000196184) OR10J4 (ENSG00000249730) OR10J3 (ENSG00000196266) FCER1A (ENSG00000179639) ACKR1 (ENSG00000213088) CADM3 (ENSG00000162706) AIM2 (ENSG00000163568) PYDC5 (ENSG00000289721) IFI16 (ENSG00000163565) PYHIN1 (ENSG00000163564) MNDA (ENSG00000163563) OR6N2 (ENSG00000188340) OR6K6 (ENSG00000180433) Orangutan MODERN SPECIES PEA15 (ENSPPYG00000000638) CASQ1 (ENSPPYG00000000639) ATP1A4 (ENSPPYG00000000640) ATP1A2 (ENSPPYG00000000641) IGSF8 (ENSPPYG00000000642) KCNJ9 (ENSPPYG00000000643) ENSPPYG00000035270 ENSPPYG00000000646 IGSF9 (ENSPPYG00000000647) ENSPPYG00000000648 CFAP45 (ENSPPYG00000000650) VSIG8 (ENSPPYG00000000651) SLAMF8 (ENSPPYG00000000652) FCRL6 (ENSPPYG00000000653) DUSP23 (ENSPPYG00000000654) CRP (ENSPPYG00000000655) ##22 APCS (ENSPPYG00000000657) ##22 OR10J5 (ENSPPYG00000000658) FCER1A (ENSPPYG00000000660) ACKR1 (ENSPPYG00000000662) CADM3 (ENSPPYG00000000663) AIM2 (ENSPPYG00000000664) IFI16 (ENSPPYG00000000665) ENSPPYG00000030874 ENSPPYG00000000666 MNDA (ENSPPYG00000000667) OR6N2 (ENSPPYG00000000669) OR6N1 (ENSPPYG00000010633) OR6K6 (ENSPPYG00000000670) OR6K3 (ENSPPYG00000000671) OR6K2 (ENSPPYG00000000672) Gibbon MODERN SPECIES 2 ATP1A4 (ENSNLEG00000013431) ATP1A2 (ENSNLEG00000028357) IGSF8 (ENSNLEG00000013416) ENSNLEG00000029263 ENSNLEG00000030285 PIGM (ENSNLEG00000013425) ENSNLEG00000013423 IGSF9 (ENSNLEG00000013353) ENSNLEG00000013350 CFAP45 (ENSNLEG00000013296) ENSNLEG00000013290 ENSNLEG00000035894 SLAMF8 (ENSNLEG00000013286) FCRL6 (ENSNLEG00000013276) DUSP23 (ENSNLEG00000013271) CRP (ENSNLEG00000013261) ##22 APCS (ENSNLEG00000013249) ##22 OR10J5 (ENSNLEG00000019159) OR10J1 (ENSNLEG00000019158) ENSNLEG00000034423 ENSNLEG00000013245 FCER1A (ENSNLEG00000013227) ACKR1 (ENSNLEG00000019157) CADM3 (ENSNLEG00000013186) AIM2 (ENSNLEG00000013170) IFI16 (ENSNLEG00000013156) PYDC5 (ENSNLEG00000032594) PYHIN1 (ENSNLEG00000013125) MNDA (ENSNLEG00000013109) ENSNLEG00000013108 OR6N1 (ENSNLEG00000019156) Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Cercopithecinae ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Macaca ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Macaca_a ANCESTRAL SPECIES ENSGT00940000162378 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT00390000005534.b.b.c.b.a.a.b.a.b ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00940000170471.A.b.b.a.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.b ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000162973.b ENSGT00940000162973.a ENSGT00940000163294 ENSGT00940000161240 Rhesus MODERN SPECIES IGSF8 (ENSMMUG00000031542) KCNJ9 (ENSMMUG00000054510) ENSMMUG00000054927 KCNJ10 (ENSMMUG00000046470) PIGM (ENSMMUG00000047089) ENSMMUG00000052181 SLAMF9 (ENSMMUG00000004707) IGSF9 (ENSMMUG00000004706) TAGLN2 (ENSMMUG00000040609) ENSMMUG00000052448 CFAP45 (ENSMMUG00000011342) VSIG8 (ENSMMUG00000011340) SLAMF8 (ENSMMUG00000011338) FCRL6 (ENSMMUG00000011335) DUSP23 (ENSMMUG00000018444) CRP (ENSMMUG00000008922) ##22 APCS (ENSMMUG00000006685) ##22 ENSMMUG00000053632 FCER1A (ENSMMUG00000013428) ACKR1 (ENSMMUG00000001300) CADM3 (ENSMMUG00000001297) PYHIN1 (ENSMMUG00000004488) AIM2 (ENSMMUG00000004492) IFI16 (ENSMMUG00000004490) ENSMMUG00000060051 OR6N2 (ENSMMUG00000059701) OR6N1 (ENSMMUG00000018450) OR6K6 (ENSMMUG00000050231) ENSMMUG00000061549 OR6K3 (ENSMMUG00000056001) OR6K2 (ENSMMUG00000000733) Crab-eating macaque MODERN SPECIES ENSMFAG00000057290 IGSF8 (ENSMFAG00000036621) ENSMFAG00000030757 KCNJ10 (ENSMFAG00000052965) PIGM (ENSMFAG00000055275) ENSMFAG00000063512 SLAMF9 (ENSMFAG00000044181) IGSF9 (ENSMFAG00000000704) TAGLN2 (ENSMFAG00000040025) ENSMFAG00000056485 CFAP45 (ENSMFAG00000041889) VSIG8 (ENSMFAG00000003273) SLAMF8 (ENSMFAG00000044324) FCRL6 (ENSMFAG00000039265) DUSP23 (ENSMFAG00000043752) CRP (ENSMFAG00000041764) ##22 APCS (ENSMFAG00000057662) ##22 FCER1A (ENSMFAG00000059830) ACKR1 (ENSMFAG00000050751) CADM3 (ENSMFAG00000024756) AIM2 (ENSMFAG00000031835) IFI16 (ENSMFAG00000041789) PYHIN1 (ENSMFAG00000000883) OR6N2 (ENSMFAG00000064046) OR6N1 (ENSMFAG00000064922) OR6K6 (ENSMFAG00000050577) ENSMFAG00000054001 OR6K3 (ENSMFAG00000060908) SPTA1 (ENSMFAG00000029972) OR10Z1 (ENSMFAG00000052036) ENSMFAG00000020370 Pig-tailed macaque MODERN SPECIES 262 PEA15 (ENSMNEG00000041353) CASQ1 (ENSMNEG00000028911) ATP1A4 (ENSMNEG00000032619) ATP1A2 (ENSMNEG00000035806) IGSF8 (ENSMNEG00000026454) KCNJ9 (ENSMNEG00000044649) ENSMNEG00000033308 SLAMF9 (ENSMNEG00000031100) IGSF9 (ENSMNEG00000012260) TAGLN2 (ENSMNEG00000045054) CFAP45 (ENSMNEG00000001599) VSIG8 (ENSMNEG00000034921) SLAMF8 (ENSMNEG00000031798) FCRL6 (ENSMNEG00000039197) DUSP23 (ENSMNEG00000042678) CRP (ENSMNEG00000043011) ##22 APCS (ENSMNEG00000042779) ##22 OR10J5 (ENSMNEG00000037423) OR10J1 (ENSMNEG00000032157) OR10J3 (ENSMNEG00000042318) FCER1A (ENSMNEG00000017791) ACKR1 (ENSMNEG00000005830) CADM3 (ENSMNEG00000034135) AIM2 (ENSMNEG00000030736) IFI16 (ENSMNEG00000038620) PYDC5 (ENSMNEG00000044892) PYHIN1 (ENSMNEG00000030344) MNDA (ENSMNEG00000035719) ENSMNEG00000031903 OR6K3 (ENSMNEG00000037850) SPTA1 (ENSMNEG00000041794) Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b Olive baboon MODERN SPECIES DCAF8 (ENSPANG00000016333) PEA15 (ENSPANG00000008809) CASQ1 (ENSPANG00000005566) ATP1A2 (ENSPANG00000013865) IGSF8 (ENSPANG00000008350) KCNJ9 (ENSPANG00000002430) ENSPANG00000035209 SLAMF9 (ENSPANG00000022213) IGSF9 (ENSPANG00000014850) TAGLN2 (ENSPANG00000029669) CFAP45 (ENSPANG00000025935) VSIG8 (ENSPANG00000022722) SLAMF8 (ENSPANG00000011200) FCRL6 (ENSPANG00000003626) DUSP23 (ENSPANG00000030858) CRP (ENSPANG00000016772) ##22 ENSPANG00000037377 ENSPANG00000043887 FCER1A (ENSPANG00000020302) ENSPANG00000019563 AIM2 (ENSPANG00000022416) PYHIN1 (ENSPANG00000024682) IFI16 (ENSPANG00000002431) OR6N2 (ENSPANG00000040274) ENSPANG00000043053 OR6K6 (ENSPANG00000047821) ENSPANG00000046311 OR6K3 (ENSPANG00000005477) OR6K2 (ENSPANG00000010232) SPTA1 (ENSPANG00000005568) OR10Z1 (ENSPANG00000050600) Cercopithecinae_d ANCESTRAL SPECIES 33 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00910000146462 ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.b ENSGT00940000163294 Drill MODERN SPECIES 1687 ENSMLEG00000039695 ENSMLEG00000039063 ATP1A4 (ENSMLEG00000034980) ATP1A2 (ENSMLEG00000028315) IGSF8 (ENSMLEG00000039495) KCNJ9 (ENSMLEG00000033418) ENSMLEG00000041424 SLAMF9 (ENSMLEG00000001751) IGSF9 (ENSMLEG00000004555) TAGLN2 (ENSMLEG00000038384) CFAP45 (ENSMLEG00000036314) VSIG8 (ENSMLEG00000030964) SLAMF8 (ENSMLEG00000041380) FCRL6 (ENSMLEG00000035007) DUSP23 (ENSMLEG00000030550) CRP (ENSMLEG00000036486) ##22 Sooty mangabey MODERN SPECIES 144 PEA15 (ENSCATG00000042517) CASQ1 (ENSCATG00000031877) ATP1A4 (ENSCATG00000036266) ATP1A2 (ENSCATG00000043418) IGSF8 (ENSCATG00000031759) KCNJ9 (ENSCATG00000025946) ENSCATG00000040133 SLAMF9 (ENSCATG00000016332) IGSF9 (ENSCATG00000036216) TAGLN2 (ENSCATG00000037697) CFAP45 (ENSCATG00000042643) VSIG8 (ENSCATG00000044066) SLAMF8 (ENSCATG00000044031) FCRL6 (ENSCATG00000036471) DUSP23 (ENSCATG00000038538) CRP (ENSCATG00000032411) ##22 APCS (ENSCATG00000030832) ##22 OR10J5 (ENSCATG00000038110) OR10J1 (ENSCATG00000038190) Vervet Monkey MODERN SPECIES 12 ATP1A4 (ENSCSAG00000002543) ATP1A2 (ENSCSAG00000002527) IGSF8 (ENSCSAG00000002518) KCNJ9 (ENSCSAG00000002515) KCNJ10 (ENSCSAG00000000085) PIGM (ENSCSAG00000000083) SLAMF9 (ENSCSAG00000002512) IGSF9 (ENSCSAG00000002507) TAGLN2 (ENSCSAG00000002493) ENSCSAG00000000081 CFAP45 (ENSCSAG00000002489) VSIG8 (ENSCSAG00000002485) SLAMF8 (ENSCSAG00000002478) FCRL6 (ENSCSAG00000002469) DUSP23 (ENSCSAG00000002463) CRP (ENSCSAG00000002458) ##22 APCS (ENSCSAG00000002457) ##22 FCER1A (ENSCSAG00000002450) ACKR1 (ENSCSAG00000000079) CADM3 (ENSCSAG00000002448) AIM2 (ENSCSAG00000002445) IFI16 (ENSCSAG00000002442) PYHIN1 (ENSCSAG00000002439) MNDA (ENSCSAG00000002436) OR6N2 (ENSCSAG00000000077) OR6N1 (ENSCSAG00000000075) OR6K6 (ENSCSAG00000000073) ENSCSAG00000002434 OR6K3 (ENSCSAG00000000072) SPTA1 (ENSCSAG00000002429) OR10Z1 (ENSCSAG00000002405) Rhinopithecus ANCESTRAL SPECIES 169 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.`b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B Golden snub-nosed monkey MODERN SPECIES 907 PEA15 (ENSRROG00000035953) CASQ1 (ENSRROG00000043167) ATP1A4 (ENSRROG00000034817) ATP1A2 (ENSRROG00000033472) IGSF8 (ENSRROG00000036784) KCNJ9 (ENSRROG00000045425) ENSRROG00000042383 SLAMF9 (ENSRROG00000032805) IGSF9 (ENSRROG00000041941) TAGLN2 (ENSRROG00000040627) CFAP45 (ENSRROG00000032010) VSIG8 (ENSRROG00000036238) SLAMF8 (ENSRROG00000030911) FCRL6 (ENSRROG00000040864) DUSP23 (ENSRROG00000037492) CRP (ENSRROG00000044933) ##22 APCS (ENSRROG00000037754) ##22 OR10J5 (ENSRROG00000034634) Black snub-nosed monkey MODERN SPECIES 2638 DCAF8 (ENSRBIG00000042492) PEA15 (ENSRBIG00000035032) CASQ1 (ENSRBIG00000036913) ATP1A4 (ENSRBIG00000028949) IGSF8 (ENSRBIG00000038288) KCNJ9 (ENSRBIG00000034910) ENSRBIG00000026750 SLAMF9 (ENSRBIG00000029033) IGSF9 (ENSRBIG00000036697) TAGLN2 (ENSRBIG00000040928) CFAP45 (ENSRBIG00000027659) VSIG8 (ENSRBIG00000044934) SLAMF8 (ENSRBIG00000041941) FCRL6 (ENSRBIG00000017071) DUSP23 (ENSRBIG00000027685) CRP (ENSRBIG00000040716) ##22 Platyrrhini ANCESTRAL SPECIES 12 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.b.b.d ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.a ENSGT00940000162973.a ENSGT00940000163294 ENSGT00940000161240 Cebidae ANCESTRAL SPECIES 12 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000163973 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.b.b.d ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.a ENSGT00940000162973.a ENSGT00940000163294 ENSGT00940000161240 Marmoset MODERN SPECIES 9 PEA15 (ENSCJAG00000082639) CASQ1 (ENSCJAG00000073940) ENSCJAG00000079945 IGSF8 (ENSCJAG00000041164) KCNJ9 (ENSCJAG00000006092) ENSCJAG00000074194 ENSCJAG00000044098 ATP1A2 (ENSCJAG00000006022) SLAMF9 (ENSCJAG00000006099) IGSF9 (ENSCJAG00000006107) TAGLN2 (ENSCJAG00000006156) CFAP45 (ENSCJAG00000006175) VSIG8 (ENSCJAG00000006224) SLAMF8 (ENSCJAG00000006239) DUSP23 (ENSCJAG00000080143) CRP (ENSCJAG00000006271) ##22 APCS (ENSCJAG00000006279) ##22 ENSCJAG00000052551 ##22 OR10J1 (ENSCJAG00000022039) OR10J3 (ENSCJAG00000061455) FCER1A (ENSCJAG00000006292) ACKR1 (ENSCJAG00000006303) CADM3 (ENSCJAG00000006307) ENSCJAG00000077884 AIM2 (ENSCJAG00000006327) ENSCJAG00000042581 ENSCJAG00000047539 OR6N2 (ENSCJAG00000022040) OR6N1 (ENSCJAG00000022041) ENSCJAG00000076227 OR6K6 (ENSCJAG00000022042) Cebidae_a ANCESTRAL SPECIES 6 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT00940000159272.B ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.b.b.d ENSGT00390000013296.a.b.b.c ENSGT00390000013296.a.b.a ENSGT00940000161240 ENSGT00940000154227.a.a.c.b ENSGT01100000263475.d.a.g.a.a ENSGT01100000263475.d.a.g.a.b ENSGT01100000263475.d.a.g.b.b.b Capuchin MODERN SPECIES 313 PEA15 (ENSCCAG00000035896) CASQ1 (ENSCCAG00000035822) ATP1A4 (ENSCCAG00000037154) ATP1A2 (ENSCCAG00000035348) IGSF8 (ENSCCAG00000034717) KCNJ9 (ENSCCAG00000028171) ENSCCAG00000036022 SLAMF9 (ENSCCAG00000030969) IGSF9 (ENSCCAG00000037504) ENSCCAG00000035859 CFAP45 (ENSCCAG00000037549) VSIG8 (ENSCCAG00000025741) SLAMF8 (ENSCCAG00000034074) FCRL6 (ENSCCAG00000023320) DUSP23 (ENSCCAG00000021134) CRP (ENSCCAG00000022081) ##22 APCS (ENSCCAG00000019709) ##22 OR10J5 (ENSCCAG00000028466) OR10J3 (ENSCCAG00000034990) FCER1A (ENSCCAG00000034456) ACKR1 (ENSCCAG00000021032) CADM3 (ENSCCAG00000033767) AIM2 (ENSCCAG00000014869) ENSCCAG00000029827 PYHIN1 (ENSCCAG00000029189) MNDA (ENSCCAG00000033713) SPTA1 (ENSCCAG00000029933) OR10R2 (ENSCCAG00000036120) CD1E (ENSCCAG00000018004) CD1B (ENSCCAG00000034481) CD1C (ENSCCAG00000028935) Bolivian squirrel monkey MODERN SPECIES 136 DCAF8 (ENSSBOG00000027086) PEA15 (ENSSBOG00000024119) CASQ1 (ENSSBOG00000033165) ATP1A2 (ENSSBOG00000026209) IGSF8 (ENSSBOG00000021162) KCNJ9 (ENSSBOG00000036068) ENSSBOG00000029266 SLAMF9 (ENSSBOG00000020320) IGSF9 (ENSSBOG00000024421) TAGLN2 (ENSSBOG00000032060) CFAP45 (ENSSBOG00000008535) VSIG8 (ENSSBOG00000028536) SLAMF8 (ENSSBOG00000026112) FCRL6 (ENSSBOG00000035509) DUSP23 (ENSSBOG00000028584) CRP (ENSSBOG00000009126) ##22 APCS (ENSSBOG00000032545) ##22 ENSSBOG00000024023 ##22 ENSSBOG00000014650 FCER1A (ENSSBOG00000028978) ACKR1 (ENSSBOG00000026604) CADM3 (ENSSBOG00000022549) AIM2 (ENSSBOG00000021470) ENSSBOG00000025692 PYHIN1 (ENSSBOG00000032136) SPTA1 (ENSSBOG00000027374) CD1E (ENSSBOG00000025378) CD1B (ENSSBOG00000022672) CD1C (ENSSBOG00000020594) CD1A (ENSSBOG00000025767) CD1D (ENSSBOG00000022846) Mas night monkey MODERN SPECIES 1180 ENSANAG00000026536 ENSANAG00000035568 PEA15 (ENSANAG00000034320) CASQ1 (ENSANAG00000036861) ATP1A2 (ENSANAG00000034710) IGSF8 (ENSANAG00000028885) KCNJ9 (ENSANAG00000025048) ENSANAG00000001403 SLAMF9 (ENSANAG00000032660) IGSF9 (ENSANAG00000029906) TAGLN2 (ENSANAG00000034482) CFAP45 (ENSANAG00000022146) SLAMF8 (ENSANAG00000028983) FCRL6 (ENSANAG00000030620) ENSANAG00000036469 CRP (ENSANAG00000030906) ##22 APCS (ENSANAG00000025821) ##22 ENSANAG00000030797 ##22 ENSANAG00000025018 OR10J3 (ENSANAG00000032701) FCER1A (ENSANAG00000006240) ACKR1 (ENSANAG00000022852) CADM3 (ENSANAG00000024662) AIM2 (ENSANAG00000022336) ENSANAG00000026091 PYHIN1 (ENSANAG00000038212) MNDA (ENSANAG00000030402) SPTA1 (ENSANAG00000032115) OR10R2 (ENSANAG00000022932) ENSANAG00000036137 ENSANAG00000019947 Tarsier MODERN SPECIES 4532 DCAF8 (ENSTSYG00000007684) PEA15 (ENSTSYG00000033263) CASQ1 (ENSTSYG00000028369) ATP1A4 (ENSTSYG00000003885) ATP1A2 (ENSTSYG00000029846) IGSF8 (ENSTSYG00000034054) KCNJ9 (ENSTSYG00000030756) ENSTSYG00000003781 IGSF9 (ENSTSYG00000029345) TAGLN2 (ENSTSYG00000001645) CFAP45 (ENSTSYG00000002364) VSIG8 (ENSTSYG00000031273) SLAMF8 (ENSTSYG00000004746) ENSTSYG00000000556 DUSP23 (ENSTSYG00000029394) CRP (ENSTSYG00000012775) ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a Lemuriformes ANCESTRAL SPECIES 11 ENSGT00950000182900.D.d.a ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a Lemuriformes_a ANCESTRAL SPECIES 57 ENSGT00950000182900.D.d.a ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b.a ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.b ENSGT00390000013296.a.b.a Coquerels sifaka MODERN SPECIES 877 DCAF8 (ENSPCOG00000020516) PEA15 (ENSPCOG00000023116) CASQ1 (ENSPCOG00000013800) ATP1A4 (ENSPCOG00000015025) ATP1A2 (ENSPCOG00000028575) IGSF8 (ENSPCOG00000015734) KCNJ9 (ENSPCOG00000017373) ENSPCOG00000020119 SLAMF9 (ENSPCOG00000026453) IGSF9 (ENSPCOG00000015618) TAGLN2 (ENSPCOG00000020750) CFAP45 (ENSPCOG00000022408) VSIG8 (ENSPCOG00000006884) SLAMF8 (ENSPCOG00000006445) DUSP23 (ENSPCOG00000016262) CRP (ENSPCOG00000013443) ##22 ENSPCOG00000000116 APCS (ENSPCOG00000014740) ##22 ENSPCOG00000011342 FCER1A (ENSPCOG00000019274) ACKR1 (ENSPCOG00000009330) CADM3 (ENSPCOG00000014604) AIM2 (ENSPCOG00000000060) Greater bamboo lemur MODERN SPECIES 1029 ENSPSMG00000016782 ##22 ENSPSMG00000016785 APCS (ENSPSMG00000016792) ##22 ENSPSMG00000016797 ##22 OR10J5 (ENSPSMG00000016803) OR10J1 (ENSPSMG00000016808) ENSPSMG00000016818 OR10J3 (ENSPSMG00000016824) FCER1A (ENSPSMG00000016836) ENSPSMG00000016840 ENSPSMG00000016847 ##22 ACKR1 (ENSPSMG00000016853) CADM3 (ENSPSMG00000016884) ENSPSMG00000016897 AIM2 (ENSPSMG00000016906) ENSPSMG00000016982 Bushbaby MODERN SPECIES 206 DCAF8 (ENSOGAG00000011349) PEA15 (ENSOGAG00000011348) CASQ1 (ENSOGAG00000027222) ATP1A2 (ENSOGAG00000011343) IGSF8 (ENSOGAG00000024229) KCNJ9 (ENSOGAG00000026356) KCNJ10 (ENSOGAG00000000856) PIGM (ENSOGAG00000030907) SLAMF9 (ENSOGAG00000013177) IGSF9 (ENSOGAG00000034181) TAGLN2 (ENSOGAG00000028515) CFAP45 (ENSOGAG00000010704) VSIG8 (ENSOGAG00000010701) SLAMF8 (ENSOGAG00000010698) DUSP23 (ENSOGAG00000010691) CRP (ENSOGAG00000010689) ##22 ENSOGAG00000015384 APCS (ENSOGAG00000001034) ##22 ENSOGAG00000029779 ##22 OR10J5 (ENSOGAG00000034929) OR10J1 (ENSOGAG00000030157) OR10J4 (ENSOGAG00000032393) ENSOGAG00000032740 ENSOGAG00000031740 OR10J3 (ENSOGAG00000026374) FCER1A (ENSOGAG00000015574) ENSOGAG00000015572 ENSOGAG00000030893 ##22 CADM3 (ENSOGAG00000005112) AIM2 (ENSOGAG00000000264) ENSOGAG00000006378 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Tree shrew MODERN SPECIES 8322 DUSP23 (ENSTBEG00000000990) ENSTBEG00000000983 ##22 Glires ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Lagomorpha ANCESTRAL SPECIES 1 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00940000159779 ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164490 Rabbit MODERN SPECIES 4 ATP1A4 (ENSOCUG00000029185) ATP1A2 (ENSOCUG00000017667) IGSF8 (ENSOCUG00000023058) KCNJ9 (ENSOCUG00000038517) KCNJ10 (ENSOCUG00000011928) PIGM (ENSOCUG00000015291) ENSOCUG00000027503 SLAMF9 (ENSOCUG00000002366) IGSF9 (ENSOCUG00000002356) TAGLN2 (ENSOCUG00000022296) CFAP45 (ENSOCUG00000002349) VSIG8 (ENSOCUG00000002342) SLAMF8 (ENSOCUG00000002338) ENSOCUG00000021578 DUSP23 (ENSOCUG00000015831) CRP (ENSOCUG00000004702) ##22 APCS (ENSOCUG00000014365) ##22 OR10J5 (ENSOCUG00000011962) ENSOCUG00000021322 OR10J1 (ENSOCUG00000000350) OR10J4 (ENSOCUG00000021643) ENSOCUG00000033994 OR10J3 (ENSOCUG00000015476) FCER1A (ENSOCUG00000022947) ENSOCUG00000031386 CADM3 (ENSOCUG00000016385) MNDA (ENSOCUG00000024795) ENSOCUG00000036381 ENSOCUG00000033250 OR6N2 (ENSOCUG00000010597) OR6N1 (ENSOCUG00000017695) Pika MODERN SPECIES 1173 PEA15 (ENSOPRG00000011962) CASQ1 (ENSOPRG00000011935) ATP1A4 (ENSOPRG00000011893) ENSOPRG00000011853 IGSF8 (ENSOPRG00000011837) KCNJ9 (ENSOPRG00000011834) SLAMF9 (ENSOPRG00000011806) IGSF9 (ENSOPRG00000011773) TAGLN2 (ENSOPRG00000018989) CFAP45 (ENSOPRG00000011757) VSIG8 (ENSOPRG00000011747) SLAMF8 (ENSOPRG00000011737) ENSOPRG00000011731 ENSOPRG00000011686 DUSP23 (ENSOPRG00000011681) CRP (ENSOPRG00000011664) ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Rodentia_B ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Myomorpha ANCESTRAL SPECIES 16 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Muroidea ANCESTRAL SPECIES 9 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a.a.b ENSGT00390000013296.a.b.a.a.a ENSGT00390000018908.a.a Muroidea_A ANCESTRAL SPECIES 12 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.b Cricetidae ANCESTRAL SPECIES 13 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.b Cricetidae_B ANCESTRAL SPECIES 8 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.b ENSGT00390000013296.a.b.a.a.b Prairie vole MODERN SPECIES 118 Pea15a (ENSMOCG00000013796) Casq1 (ENSMOCG00000003428) Atp1a4 (ENSMOCG00000016552) Atp1a2 (ENSMOCG00000001569) Igsf8 (ENSMOCG00000007929) Kcnj9 (ENSMOCG00000017119) Kcnj10 (ENSMOCG00000015793) Pigm (ENSMOCG00000001955) Slamf9 (ENSMOCG00000014177) Igsf9 (ENSMOCG00000000988) Tagln2 (ENSMOCG00000014146) Cfap45 (ENSMOCG00000008042) Vsig8 (ENSMOCG00000016054) Slamf8 (ENSMOCG00000008354) Dusp23 (ENSMOCG00000021329) Crp (ENSMOCG00000021079) ##22 Apcs (ENSMOCG00000015189) ##22 Or10j5 (ENSMOCG00000002391) ENSMOCG00000002640 Fcer1a (ENSMOCG00000017859) ENSMOCG00000015105 ##22 Ackr1 (ENSMOCG00000014680) Cadm3 (ENSMOCG00000009497) Aim2 (ENSMOCG00000018788) ENSMOCG00000019015 ENSMOCG00000014760 ENSMOCG00000021059 ENSMOCG00000001010 Or6n2 (ENSMOCG00000002377) Or6k6 (ENSMOCG00000002933) Or6k4 (ENSMOCG00000003407) Northern American deer mouse MODERN SPECIES 2 Pea15a (ENSPEMG00000030852) Casq1 (ENSPEMG00000011466) Atp1a4 (ENSPEMG00000000606) Atp1a2 (ENSPEMG00000013238) Igsf8 (ENSPEMG00000017176) Kcnj9 (ENSPEMG00000014733) Kcnj10 (ENSPEMG00000028152) Pigm (ENSPEMG00000004635) Slamf9 (ENSPEMG00000009321) Igsf9 (ENSPEMG00000011335) Tagln2 (ENSPEMG00000010399) Cfap45 (ENSPEMG00000016692) Vsig8 (ENSPEMG00000009137) Slamf8 (ENSPEMG00000015798) Dusp23 (ENSPEMG00000011195) Crp (ENSPEMG00000024726) ##22 Apcs (ENSPEMG00000017741) ##22 Or10j5 (ENSPEMG00000001889) ENSPEMG00000002551 ENSPEMG00000014050 Or10j3 (ENSPEMG00000029514) Or10j3b (ENSPEMG00000024812) Fcer1a (ENSPEMG00000016296) Or10j2 (ENSPEMG00000001739) ENSPEMG00000013567 ##22 Ackr1 (ENSPEMG00000017601) Cadm3 (ENSPEMG00000003579) ENSPEMG00000017606 ENSPEMG00000005047 ENSPEMG00000028701 ENSPEMG00000009093 Cricetinae ANCESTRAL SPECIES 4 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.e.a.a ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.a.b Golden Hamster MODERN SPECIES 697 Casq1 (ENSMAUG00000001557) Atp1a4 (ENSMAUG00000013532) Atp1a2 (ENSMAUG00000009483) Igsf8 (ENSMAUG00000005168) Kcnj9 (ENSMAUG00000004618) Kcnj10 (ENSMAUG00000003384) Pigm (ENSMAUG00000002040) Slamf9 (ENSMAUG00000002531) Igsf9 (ENSMAUG00000016697) Tagln2 (ENSMAUG00000015755) Cfap45 (ENSMAUG00000014684) Vsig8 (ENSMAUG00000013550) Slamf8 (ENSMAUG00000013303) Fcrl6 (ENSMAUG00000012715) Dusp23 (ENSMAUG00000012353) Crp (ENSMAUG00000012308) ##22 Apcs (ENSMAUG00000011083) ##22 Or10j5 (ENSMAUG00000001340) ENSMAUG00000018501 Fcer1a (ENSMAUG00000016317) ENSMAUG00000015197 ##22 Ackr1 (ENSMAUG00000015131) Cadm3 (ENSMAUG00000015645) Aim2 (ENSMAUG00000012690) ENSMAUG00000012460 ENSMAUG00000010132 ENSMAUG00000004249 ENSMAUG00000001345 Or6n2 (ENSMAUG00000018276) Or6k6 (ENSMAUG00000018183) Or6k8-ps1 (ENSMAUG00000018076) Chinese hamster chok1gshd MODERN SPECIES 2 Casq1 (ENSCGRG00001022123) Atp1a4 (ENSCGRG00001019614) Atp1a2 (ENSCGRG00001009182) Igsf8 (ENSCGRG00001018298) Kcnj9 (ENSCGRG00001000969) Kcnj10 (ENSCGRG00001003433) Pigm (ENSCGRG00001004342) Slamf9 (ENSCGRG00001018988) Igsf9 (ENSCGRG00001020689) ENSCGRG00001018057 Cfap45 (ENSCGRG00001013630) Vsig8 (ENSCGRG00001023265) Slamf8 (ENSCGRG00001019455) ENSCGRG00001025048 Dusp23 (ENSCGRG00001025037) Crp (ENSCGRG00001024968) ##22 Apcs (ENSCGRG00001024627) ##22 Or10j5 (ENSCGRG00001002194) ENSCGRG00001012364 ENSCGRG00001012248 ENSCGRG00001012729 Or10j3 (ENSCGRG00001001033) Or10j3b (ENSCGRG00001012422) Fcer1a (ENSCGRG00001011286) Or10j2 (ENSCGRG00001012095) ENSCGRG00001002954 ##22 Ackr1 (ENSCGRG00001021594) Cadm3 (ENSCGRG00001025045) Aim2 (ENSCGRG00001014376) ENSCGRG00001024890 ENSCGRG00001024308 Murinae ANCESTRAL SPECIES 11 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163654.d ENSGT00940000163654.c ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b ENSGT00390000013296.a.a.f.a ENSGT00390000013296.a.a.e.b Mus ANCESTRAL SPECIES 5 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163654.d ENSGT00940000163654.c ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.a.a.e.a.b ENSGT00390000013296.a.b.a.a.a Mus_A ANCESTRAL SPECIES 5 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163654.d ENSGT00940000163654.c ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Mus_B ANCESTRAL SPECIES 7 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163654.d ENSGT00940000163654.c ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.e.a.b.a Mouse MODERN SPECIES Casq1 (ENSMUSG00000007122) Atp1a4 (ENSMUSG00000007107) Igsf8 (ENSMUSG00000038034) Atp1a2 (ENSMUSG00000007097) Kcnj9 (ENSMUSG00000038026) Kcnj10 (ENSMUSG00000044708) Pigm (ENSMUSG00000050229) Slamf9 (ENSMUSG00000026548) Igsf9 (ENSMUSG00000037995) Tagln2 (ENSMUSG00000026547) Cfap45 (ENSMUSG00000026546) Vsig8 (ENSMUSG00000049598) Slamf8 (ENSMUSG00000053318) Fcrl6 (ENSMUSG00000070504) Dusp23 (ENSMUSG00000026544) Crp (ENSMUSG00000037942) ##22 Apcs (ENSMUSG00000026542) ##22 Or10j5 (ENSMUSG00000037924) Or10j27 (ENSMUSG00000062527) Or10j7 (ENSMUSG00000058981) Or10j3 (ENSMUSG00000046643) Or10j3b (ENSMUSG00000049456) Fcer1a (ENSMUSG00000005339) Or10j2 (ENSMUSG00000049605) Mptx2 (ENSMUSG00000079180) ##22 Ackr1 (ENSMUSG00000037872) Cadm3 (ENSMUSG00000005338) Aim2 (ENSMUSG00000037860) Ifi206 (ENSMUSG00000037849) Ifi214 (ENSMUSG00000070501) Ifi213 (ENSMUSG00000073491) Mus_C ANCESTRAL SPECIES 1 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.gb ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163654.d ENSGT00940000163654.c ENSGT00940000162870.c ENSGT00940000162870.d ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.f.b.a.b.a ENSGT00390000013296.a.a.f.a.a ENSGT00390000013296.a.a.e.a.b.a spretus MODERN SPECIES Pea15a (MGP_SPRETEiJ_G0015692) Casq1 (MGP_SPRETEiJ_G0015693) Atp1a4 (MGP_SPRETEiJ_G0015694) Atp1a2 (MGP_SPRETEiJ_G0015696) Kcnj9 (MGP_SPRETEiJ_G0015697) Kcnj10 (MGP_SPRETEiJ_G0015698) Pigm (MGP_SPRETEiJ_G0015699) Slamf9 (MGP_SPRETEiJ_G0015700) Igsf9 (MGP_SPRETEiJ_G0015701) Tagln2 (MGP_SPRETEiJ_G0015702) Cfap45 (MGP_SPRETEiJ_G0015703) Vsig8 (MGP_SPRETEiJ_G0015704) Slamf8 (MGP_SPRETEiJ_G0015705) Fcrl6 (MGP_SPRETEiJ_G0015706) Dusp23 (MGP_SPRETEiJ_G0015707) Crp (MGP_SPRETEiJ_G0015708) ##22 Apcs (MGP_SPRETEiJ_G0015709) ##22 Or10j5 (MGP_SPRETEiJ_G0015710) Or10j27 (MGP_SPRETEiJ_G0015711) Or10j7 (MGP_SPRETEiJ_G0015712) MGP_SPRETEiJ_G0015713 Or10j3b (MGP_SPRETEiJ_G0015714) Fcer1a (MGP_SPRETEiJ_G0015715) MGP_SPRETEiJ_G0015716 Mptx2 (MGP_SPRETEiJ_G0015717) ##22 Ackr1 (MGP_SPRETEiJ_G0015718) Cadm3 (MGP_SPRETEiJ_G0015719) MGP_SPRETEiJ_G0015720 MGP_SPRETEiJ_G0015724 Ifi202b (MGP_SPRETEiJ_G0015725) Or10aa1 (MGP_SPRETEiJ_G0015726) Ryukyu mouse MODERN SPECIES Casq1 (MGP_CAROLIEiJ_G0014889) Atp1a4 (MGP_CAROLIEiJ_G0014890) Igsf8 (MGP_CAROLIEiJ_G0014891) Atp1a2 (MGP_CAROLIEiJ_G0014892) Kcnj9 (MGP_CAROLIEiJ_G0014893) Kcnj10 (MGP_CAROLIEiJ_G0014894) Pigm (MGP_CAROLIEiJ_G0014895) MGP_CAROLIEiJ_G0014896 Igsf9 (MGP_CAROLIEiJ_G0014897) Tagln2 (MGP_CAROLIEiJ_G0014898) Cfap45 (MGP_CAROLIEiJ_G0014899) Vsig8 (MGP_CAROLIEiJ_G0014900) Slamf8 (MGP_CAROLIEiJ_G0014901) Fcrl6 (MGP_CAROLIEiJ_G0014902) Dusp23 (MGP_CAROLIEiJ_G0014903) Crp (MGP_CAROLIEiJ_G0014904) ##22 Apcs (MGP_CAROLIEiJ_G0014905) ##22 Or10j5 (MGP_CAROLIEiJ_G0014906) Or10j27 (MGP_CAROLIEiJ_G0014907) Or10j7 (MGP_CAROLIEiJ_G0014908) Or10j3 (MGP_CAROLIEiJ_G0014909) Or10j3b (MGP_CAROLIEiJ_G0014910) Fcer1a (MGP_CAROLIEiJ_G0014911) Or10j2 (MGP_CAROLIEiJ_G0014912) Ackr1 (MGP_CAROLIEiJ_G0014913) Cadm3 (MGP_CAROLIEiJ_G0014914) Aim2 (MGP_CAROLIEiJ_G0014915) MGP_CAROLIEiJ_G0014916 MGP_CAROLIEiJ_G0014917 MGP_CAROLIEiJ_G0014918 MGP_CAROLIEiJ_G0014920 Shrew mouse MODERN SPECIES 18 Casq1 (MGP_PahariEiJ_G0028126) Atp1a4 (MGP_PahariEiJ_G0028127) Igsf8 (MGP_PahariEiJ_G0028128) Atp1a2 (MGP_PahariEiJ_G0028129) Kcnj9 (MGP_PahariEiJ_G0028130) Kcnj10 (MGP_PahariEiJ_G0028131) Pigm (MGP_PahariEiJ_G0028132) Slamf9 (MGP_PahariEiJ_G0028133) Igsf9 (MGP_PahariEiJ_G0028134) Tagln2 (MGP_PahariEiJ_G0028135) Cfap45 (MGP_PahariEiJ_G0028136) Vsig8 (MGP_PahariEiJ_G0028137) Slamf8 (MGP_PahariEiJ_G0028138) MGP_PahariEiJ_G0028139 Dusp23 (MGP_PahariEiJ_G0028140) Crp (MGP_PahariEiJ_G0028141) ##22 Apcs (MGP_PahariEiJ_G0028142) ##22 Or10j5 (MGP_PahariEiJ_G0028143) Or10j27 (MGP_PahariEiJ_G0028145) Or10j7 (MGP_PahariEiJ_G0028146) Or10j3b (MGP_PahariEiJ_G0028147) Or10j2 (MGP_PahariEiJ_G0028148) MGP_PahariEiJ_G0028149 ##22 MGP_PahariEiJ_G0028150 ##22 Ackr1 (MGP_PahariEiJ_G0028151) Cadm3 (MGP_PahariEiJ_G0028152) MGP_PahariEiJ_G0028153 MGP_PahariEiJ_G0028154 MGP_PahariEiJ_G0028155 MGP_PahariEiJ_G0028156 Ifi214 (MGP_PahariEiJ_G0028157) Upper Galilee mountains blind mole rat MODERN SPECIES 1119 Copa (ENSNGAG00000014690) Pex19 (ENSNGAG00000021061) Dcaf8 (ENSNGAG00000015830) Pea15a (ENSNGAG00000008317) Casq1 (ENSNGAG00000011364) Atp1a2 (ENSNGAG00000018905) Igsf8 (ENSNGAG00000016168) Kcnj9 (ENSNGAG00000020566) Kcnj10 (ENSNGAG00000020981) Igsf9 (ENSNGAG00000014249) Tagln2 (ENSNGAG00000000484) Cfap45 (ENSNGAG00000001181) Vsig8 (ENSNGAG00000008436) Slamf8 (ENSNGAG00000018862) Dusp23 (ENSNGAG00000000743) Crp (ENSNGAG00000020190) ##22 Fcer1a (ENSNGAG00000013961) ENSNGAG00000000474 ENSNGAG00000000729 ##22 Ackr1 (ENSNGAG00000001707) Cadm3 (ENSNGAG00000005609) Aim2 (ENSNGAG00000017033) ENSNGAG00000019400 ENSNGAG00000011188 Or6k14 (ENSNGAG00000000691) Spta1 (ENSNGAG00000014572) Or6k6 (ENSNGAG00000019536) Lesser Egyptian jerboa MODERN SPECIES 199 ENSJJAG00000022629 Casq1 (ENSJJAG00000022031) Atp1a4 (ENSJJAG00000018895) Atp1a2 (ENSJJAG00000017505) Igsf8 (ENSJJAG00000009719) Kcnj9 (ENSJJAG00000000650) Kcnj10 (ENSJJAG00000000220) Pigm (ENSJJAG00000013216) Slamf9 (ENSJJAG00000017960) Igsf9 (ENSJJAG00000016571) Tagln2 (ENSJJAG00000013181) Cfap45 (ENSJJAG00000012021) Vsig8 (ENSJJAG00000011307) Slamf8 (ENSJJAG00000010665) Dusp23 (ENSJJAG00000009910) Crp (ENSJJAG00000003997) ##22 Apcs (ENSJJAG00000013862) ##22 ENSJJAG00000013735 Fcer1a (ENSJJAG00000003143) Ackr1 (ENSJJAG00000022885) Cadm3 (ENSJJAG00000022014) Aim2 (ENSJJAG00000019224) ENSJJAG00000015438 Spta1 (ENSJJAG00000006211) ENSJJAG00000000475 Fmn2 (ENSJJAG00000021282) Kangaroo rat MODERN SPECIES 450 Pea15a (ENSDORG00000025879) Casq1 (ENSDORG00000013062) ENSDORG00000026888 ENSDORG00000023846 Atp1a2 (ENSDORG00000025124) Igsf8 (ENSDORG00000007975) Kcnj9 (ENSDORG00000026272) Kcnj10 (ENSDORG00000011681) Pigm (ENSDORG00000011680) Igsf9 (ENSDORG00000010846) Tagln2 (ENSDORG00000010844) Cfap45 (ENSDORG00000010843) Vsig8 (ENSDORG00000009694) Slamf8 (ENSDORG00000003126) Dusp23 (ENSDORG00000025635) Crp (ENSDORG00000003120) ##22 Apcs (ENSDORG00000005557) ##22 ENSDORG00000008016 ENSDORG00000026308 ENSDORG00000006655 ##22 Ackr1 (ENSDORG00000007815) Cadm3 (ENSDORG00000007812) ENSDORG00000025844 Spta1 (ENSDORG00000016657) ENSDORG00000023576 ENSDORG00000013579 Or10k2 (ENSDORG00000006909) ENSDORG00000023523 Kirrel (ENSDORG00000006781) Fcrls (ENSDORG00000029618) Cd5l (ENSDORG00000015348) Rodentia_A ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870.e.a ENSGT00940000163654 ENSGT00940000162870.e.b ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Naked mole-rat female MODERN SPECIES 20 CASQ1 (ENSHGLG00000036911) ATP1A4 (ENSHGLG00000018340) ATP1A2 (ENSHGLG00000015210) IGSF8 (ENSHGLG00000017599) KCNJ9 (ENSHGLG00000015357) KCNJ10 (ENSHGLG00000035959) PIGM (ENSHGLG00000020908) SLAMF9 (ENSHGLG00000014754) IGSF9 (ENSHGLG00000014869) ENSHGLG00000006396 CFAP45 (ENSHGLG00000007235) VSIG8 (ENSHGLG00000008875) SLAMF8 (ENSHGLG00000041257) DUSP23 (ENSHGLG00000037025) ENSHGLG00000047194 CRP (ENSHGLG00000015003) ##22 APCS (ENSHGLG00000047260) ##22 OR10J4 (ENSHGLG00000020816) ENSHGLG00000040096 ENSHGLG00000043592 FCER1A (ENSHGLG00000007498) ENSHGLG00000020531 ENSHGLG00000010350 ##22 ACKR1 (ENSHGLG00000047411) CADM3 (ENSHGLG00000006499) ENSHGLG00000009754 ENSHGLG00000043082 ENSHGLG00000021284 ENSHGLG00000035317 ENSHGLG00000036410 ENSHGLG00000006982 Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870.e.b ENSGT00940000162870.e.a ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Guinea pig MODERN SPECIES 56 CASQ1 (ENSCPOG00000014914) ATP1A4 (ENSCPOG00000032779) ATP1A2 (ENSCPOG00000014903) IGSF8 (ENSCPOG00000024002) KCNJ9 (ENSCPOG00000023593) KCNJ10 (ENSCPOG00000039801) PIGM (ENSCPOG00000003787) SLAMF9 (ENSCPOG00000007992) IGSF9 (ENSCPOG00000004460) TAGLN2 (ENSCPOG00000027416) CFAP45 (ENSCPOG00000004457) VSIG8 (ENSCPOG00000003207) SLAMF8 (ENSCPOG00000036904) ENSCPOG00000020521 DUSP23 (ENSCPOG00000034085) CRP (ENSCPOG00000013154) ##22 APCS (ENSCPOG00000009766) ##22 OR10J4 (ENSCPOG00000025720) ENSCPOG00000023288 ENSCPOG00000032628 OR10J3 (ENSCPOG00000037408) ENSCPOG00000006414 ENSCPOG00000026658 ##22 ACKR1 (ENSCPOG00000024213) CADM3 (ENSCPOG00000010800) ENSCPOG00000025018 ENSCPOG00000008556 ENSCPOG00000008779 OR6N2 (ENSCPOG00000004259) OR6K6 (ENSCPOG00000015473) ENSCPOG00000021677 Sciuridae ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Marmotini ANCESTRAL SPECIES 65 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.c ENSGT00390000013296.a.b.a Marmotini_b ANCESTRAL SPECIES 83 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.c ENSGT00390000013296.a.b.a Arctic ground squirrel MODERN SPECIES 374 PEA15 (ENSUPAG00010011194) CASQ1 (ENSUPAG00010011189) ATP1A4 (ENSUPAG00010011137) IGSF8 (ENSUPAG00010011130) KCNJ9 (ENSUPAG00010011126) KCNJ10 (ENSUPAG00010011125) PIGM (ENSUPAG00010011124) SLAMF9 (ENSUPAG00010011119) IGSF9 (ENSUPAG00010011102) TAGLN2 (ENSUPAG00010011095) CFAP45 (ENSUPAG00010011087) VSIG8 (ENSUPAG00010011083) SLAMF8 (ENSUPAG00010011080) ENSUPAG00010011076 DUSP23 (ENSUPAG00010011070) CRP (ENSUPAG00010011065) ##22 APCS (ENSUPAG00010011064) ##22 OR10J5 (ENSUPAG00010011055) OR10J1 (ENSUPAG00010011051) OR10J4 (ENSUPAG00010011048) ENSUPAG00010011042 ENSUPAG00010011037 OR10J3 (ENSUPAG00010011032) FCER1A (ENSUPAG00010011012) ENSUPAG00010011002 ACKR1 (ENSUPAG00010010982) CADM3 (ENSUPAG00010010956) AIM2 (ENSUPAG00010010949) ENSUPAG00010010923 MNDA (ENSUPAG00010010911) ENSUPAG00010010907 Squirrel MODERN SPECIES 340 DCAF8 (ENSSTOG00000007593) PEA15 (ENSSTOG00000007575) CASQ1 (ENSSTOG00000027089) ATP1A4 (ENSSTOG00000007516) ATP1A2 (ENSSTOG00000007480) IGSF8 (ENSSTOG00000025797) KCNJ9 (ENSSTOG00000022007) KCNJ10 (ENSSTOG00000014095) PIGM (ENSSTOG00000021767) SLAMF9 (ENSSTOG00000007452) IGSF9 (ENSSTOG00000027707) TAGLN2 (ENSSTOG00000028012) CFAP45 (ENSSTOG00000007432) VSIG8 (ENSSTOG00000007410) SLAMF8 (ENSSTOG00000007395) CRP (ENSSTOG00000024783) ##22 APCS (ENSSTOG00000022183) ##22 OR10J5 (ENSSTOG00000004580) OR10J1 (ENSSTOG00000004574) OR10J4 (ENSSTOG00000021702) OR10J3 (ENSSTOG00000004564) ENSSTOG00000014023 ENSSTOG00000004550 ENSSTOG00000033220 ##22 ACKR1 (ENSSTOG00000032562) CADM3 (ENSSTOG00000025214) AIM2 (ENSSTOG00000008132) ENSSTOG00000034795 MNDA (ENSSTOG00000027408) OR6N2 (ENSSTOG00000008055) OR6N1 (ENSSTOG00000028298) Alpin marmot MODERN SPECIES 29 CASQ1 (ENSMMMG00000022314) ENSMMMG00000022329 ATP1A2 (ENSMMMG00000022340) IGSF8 (ENSMMMG00000022358) KCNJ9 (ENSMMMG00000022367) KCNJ10 (ENSMMMG00000022374) PIGM (ENSMMMG00000022376) SLAMF9 (ENSMMMG00000022379) IGSF9 (ENSMMMG00000022380) TAGLN2 (ENSMMMG00000022397) CFAP45 (ENSMMMG00000022400) VSIG8 (ENSMMMG00000022406) SLAMF8 (ENSMMMG00000022412) ENSMMMG00000022417 DUSP23 (ENSMMMG00000022422) CRP (ENSMMMG00000022433) ##22 APCS (ENSMMMG00000022435) ##22 OR10J5 (ENSMMMG00000022442) OR10J1 (ENSMMMG00000022465) OR10J4 (ENSMMMG00000022466) ENSMMMG00000022473 ENSMMMG00000022475 OR10J3 (ENSMMMG00000022477) FCER1A (ENSMMMG00000022479) ENSMMMG00000022481 ACKR1 (ENSMMMG00000022488) CADM3 (ENSMMMG00000022492) AIM2 (ENSMMMG00000022506) ENSMMMG00000022507 ENSMMMG00000022510 MNDA (ENSMMMG00000022517) Eurasian red squirrel MODERN SPECIES ENSSVLG00005008261 CASQ1 (ENSSVLG00005008157) ATP1A4 (ENSSVLG00005008010) ATP1A2 (ENSSVLG00005007734) IGSF8 (ENSSVLG00005007653) KCNJ9 (ENSSVLG00005007621) ENSSVLG00005007587 SLAMF9 (ENSSVLG00005007532) IGSF9 (ENSSVLG00005007334) TAGLN2 (ENSSVLG00005007297) CFAP45 (ENSSVLG00005007226) ENSSVLG00005007193 VSIG8 (ENSSVLG00005007137) ENSSVLG00005007083 DUSP23 (ENSSVLG00005007049) CRP (ENSSVLG00005007022) ##22 APCS (ENSSVLG00005006996) ##22 OR10J5 (ENSSVLG00005006978) OR10J1 (ENSSVLG00005006957) OR10J4 (ENSSVLG00005006948) ENSSVLG00005006925 ENSSVLG00005006907 OR10J3 (ENSSVLG00005006899) FCER1A (ENSSVLG00005006869) ENSSVLG00005006859 ACKR1 (ENSSVLG00005006823) CADM3 (ENSSVLG00005006700) AIM2 (ENSSVLG00005006635) ENSSVLG00005006138 ENSSVLG00005006039 ENSSVLG00005006027 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Artiodactyla ANCESTRAL SPECIES ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT00860000136134.a ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Suina DUPLICATION Suina ANCESTRAL SPECIES 8 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.b ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Pig MODERN SPECIES 12 CASQ1 (ENSSSCG00000006390) ATP1A4 (ENSSSCG00000054190) ATP1A2 (ENSSSCG00000006391) IGSF8 (ENSSSCG00000006392) KCNJ9 (ENSSSCG00000006393) KCNJ10 (ENSSSCG00000031858) SLAMF9 (ENSSSCG00000056276) IGSF9 (ENSSSCG00000006396) ENSSSCG00000006395 CFAP45 (ENSSSCG00000006394) VSIG8 (ENSSSCG00000006399) SLAMF8 (ENSSSCG00000006398) FCRL6 (ENSSSCG00000006397) DUSP23 (ENSSSCG00000033585) ENSSSCG00000060222 CRP (ENSSSCG00000006403) ##22 ENSSSCG00000054109 APCS (ENSSSCG00000037268) ##22 OR10J5 (ENSSSCG00000058791) OR10J1 (ENSSSCG00000024008) OR10J4 (ENSSSCG00000029064) ENSSSCG00000042263 OR10J3 (ENSSSCG00000056406) FCER1A (ENSSSCG00000006413) ENSSSCG00000058649 ENSSSCG00000048076 ##22 ACKR1 (ENSSSCG00000036223) CADM3 (ENSSSCG00000006415) ENSSSCG00000006418 MNDA (ENSSSCG00000037532) ENSSSCG00000054760 Chacoan peccary MODERN SPECIES 139 ENSCWAG00000009453 ATP1A4 (ENSCWAG00000009229) ATP1A2 (ENSCWAG00000008877) IGSF8 (ENSCWAG00000008813) KCNJ9 (ENSCWAG00000008781) KCNJ10 (ENSCWAG00000008771) PIGM (ENSCWAG00000008752) SLAMF9 (ENSCWAG00000008674) IGSF9 (ENSCWAG00000008204) TAGLN2 (ENSCWAG00000008118) CFAP45 (ENSCWAG00000007904) VSIG8 (ENSCWAG00000007824) SLAMF8 (ENSCWAG00000007725) DUSP23 (ENSCWAG00000016731) CRP (ENSCWAG00000016701) ##22 ENSCWAG00000016674 ##22 ENSCWAG00000016650 APCS (ENSCWAG00000016624) ##22 OR10J1 (ENSCWAG00000016572) ENSCWAG00000016524 ENSCWAG00000016513 OR10J3 (ENSCWAG00000016506) FCER1A (ENSCWAG00000016444) ENSCWAG00000016376 ##22 ACKR1 (ENSCWAG00000016337) CADM3 (ENSCWAG00000016207) ENSCWAG00000016179 ENSCWAG00000016119 ENSCWAG00000016089 ENSCWAG00000016061 OR6N2 (ENSCWAG00000016054) Suina ANCESTRAL SPECIES 8 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.b ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a Chacoan peccary MODERN SPECIES 139 PEA15 (ENSCWAG00000009481) ENSCWAG00000009453 ATP1A4 (ENSCWAG00000009229) ATP1A2 (ENSCWAG00000008877) IGSF8 (ENSCWAG00000008813) KCNJ9 (ENSCWAG00000008781) KCNJ10 (ENSCWAG00000008771) PIGM (ENSCWAG00000008752) SLAMF9 (ENSCWAG00000008674) IGSF9 (ENSCWAG00000008204) TAGLN2 (ENSCWAG00000008118) CFAP45 (ENSCWAG00000007904) VSIG8 (ENSCWAG00000007824) SLAMF8 (ENSCWAG00000007725) DUSP23 (ENSCWAG00000016731) CRP (ENSCWAG00000016701) ##22 ENSCWAG00000016674 ##22 ENSCWAG00000016650 APCS (ENSCWAG00000016624) ##22 OR10J1 (ENSCWAG00000016572) ENSCWAG00000016524 ENSCWAG00000016513 OR10J3 (ENSCWAG00000016506) FCER1A (ENSCWAG00000016444) ENSCWAG00000016376 ##22 ACKR1 (ENSCWAG00000016337) CADM3 (ENSCWAG00000016207) ENSCWAG00000016179 ENSCWAG00000016119 ENSCWAG00000016089 ENSCWAG00000016061 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT00860000136134.a ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a Camelidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b ##22 Alpaca MODERN SPECIES 420 FCRL6 (ENSVPAG00000006618) CRP (ENSVPAG00000006615) ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT00860000136134.a ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Pecora ANCESTRAL SPECIES 2 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000169892 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Yarkand deer MODERN SPECIES 12 PEA15 (ENSCHYG00000012533) CASQ1 (ENSCHYG00000012589) ATP1A4 (ENSCHYG00000012705) IGSF8 (ENSCHYG00000013238) KCNJ9 (ENSCHYG00000013360) ENSCHYG00000013386 ENSCHYG00000013430 PIGM (ENSCHYG00000013484) SLAMF9 (ENSCHYG00000013521) IGSF9 (ENSCHYG00000013599) ENSCHYG00000014020 CFAP45 (ENSCHYG00000014106) VSIG8 (ENSCHYG00000014335) SLAMF8 (ENSCHYG00000014485) FCRL6 (ENSCHYG00000014572) CRP (ENSCHYG00000014795) ##22 ENSCHYG00000014886 ENSCHYG00000014929 APCS (ENSCHYG00000015004) ##22 OR10J5 (ENSCHYG00000015044) OR10J1 (ENSCHYG00000015068) ENSCHYG00000015115 OR10J3 (ENSCHYG00000015193) FCER1A (ENSCHYG00000015225) ENSCHYG00000015277 ENSCHYG00000015311 ##22 ACKR1 (ENSCHYG00000015346) CADM3 (ENSCHYG00000013522) ENSCHYG00000013641 ENSCHYG00000013656 ENSCHYG00000013771 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Bovidae ANCESTRAL SPECIES 1 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Caprinae ANCESTRAL SPECIES 2 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b Rambouillet Sheep MODERN SPECIES DCAF8 (ENSOARG00020015535) ENSOARG00020015426 CASQ1 (ENSOARG00020015333) ATP1A2 (ENSOARG00020012599) IGSF8 (ENSOARG00020012420) KCNJ9 (ENSOARG00020012322) ENSOARG00020012253 PIGM (ENSOARG00020012224) SLAMF9 (ENSOARG00020012175) IGSF9 (ENSOARG00020011725) TAGLN2 (ENSOARG00020011575) CFAP45 (ENSOARG00020011195) VSIG8 (ENSOARG00020011063) FCRL6 (ENSOARG00020009962) DUSP23 (ENSOARG00020009880) CRP (ENSOARG00020009837) ##22 ENSOARG00020009752 ENSOARG00020009707 ##22 ENSOARG00020009667 OR10J1 (ENSOARG00020009631) OR10J4 (ENSOARG00020009614) ENSOARG00020009605 OR10J3 (ENSOARG00020009585) FCER1A (ENSOARG00020009514) ENSOARG00020009480 ENSOARG00020009440 ##22 ACKR1 (ENSOARG00020009415) CADM3 (ENSOARG00020009216) ENSOARG00020009040 ENSOARG00020009002 OR6N2 (ENSOARG00020008947) Goat MODERN SPECIES 22 CASQ1 (ENSCHIG00000006481) ATP1A4 (ENSCHIG00000024568) ATP1A2 (ENSCHIG00000026690) IGSF8 (ENSCHIG00000010633) KCNJ9 (ENSCHIG00000019813) KCNJ10 (ENSCHIG00000001309) PIGM (ENSCHIG00000006611) SLAMF9 (ENSCHIG00000021051) IGSF9 (ENSCHIG00000016643) ENSCHIG00000027263 CFAP45 (ENSCHIG00000016971) VSIG8 (ENSCHIG00000015221) SLAMF8 (ENSCHIG00000017503) ENSCHIG00000026962 DUSP23 (ENSCHIG00000014450) CRP (ENSCHIG00000015232) ##22 APCS (ENSCHIG00000026603) ##22 OR10J5 (ENSCHIG00000005144) ENSCHIG00000011325 ENSCHIG00000017998 OR10J3 (ENSCHIG00000023434) FCER1A (ENSCHIG00000011885) ENSCHIG00000024468 ENSCHIG00000026176 ##22 ACKR1 (ENSCHIG00000003089) CADM3 (ENSCHIG00000009485) ENSCHIG00000017677 ENSCHIG00000007836 ENSCHIG00000003378 OR6N1 (ENSCHIG00000008383) OR6K6 (ENSCHIG00000014750) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Bos ANCESTRAL SPECIES ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Bos_a ANCESTRAL SPECIES 27 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00960000190682 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Domestic yak MODERN SPECIES 22 ATP1A4 (ENSBGRG00000014914) ATP1A2 (ENSBGRG00000014422) IGSF8 (ENSBGRG00000014336) KCNJ9 (ENSBGRG00000014272) ENSBGRG00000014217 ENSBGRG00000014154 PIGM (ENSBGRG00000014127) SLAMF9 (ENSBGRG00000014099) IGSF9 (ENSBGRG00000013549) TAGLN2 (ENSBGRG00000013398) CFAP45 (ENSBGRG00000013191) VSIG8 (ENSBGRG00000013076) SLAMF8 (ENSBGRG00000012927) FCRL6 (ENSBGRG00000012845) DUSP23 (ENSBGRG00000012802) CRP (ENSBGRG00000012746) ##22 APCS (ENSBGRG00000012713) ##22 OR10J5 (ENSBGRG00000012702) OR10J1 (ENSBGRG00000012668) OR10J4 (ENSBGRG00000012658) ENSBGRG00000012593 OR10J3 (ENSBGRG00000012538) FCER1A (ENSBGRG00000012407) ENSBGRG00000012318 ENSBGRG00000012300 ##22 ACKR1 (ENSBGRG00000012260) CADM3 (ENSBGRG00000012170) ENSBGRG00000012118 ENSBGRG00000012098 ENSBGRG00000012089 OR6N1 (ENSBGRG00000012011) Wild yak MODERN SPECIES 1868 CRP (ENSBMUG00000006573) ##22 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00960000190682 ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.g.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Hybrid Bos Indicus MODERN SPECIES 22 ATP1A4 (ENSBIXG00005017644) KCNJ9 (ENSBIXG00005017542) IGSF8 (ENSBIXG00005002843) KCNJ10 (ENSBIXG00005017473) ENSBIXG00005017448 PIGM (ENSBIXG00005017436) SLAMF9 (ENSBIXG00005017409) IGSF9 (ENSBIXG00005017383) ENSBIXG00005017333 CFAP45 (ENSBIXG00005017272) VSIG8 (ENSBIXG00005007559) SLAMF8 (ENSBIXG00005017188) FCRL6 (ENSBIXG00005017159) DUSP23 (ENSBIXG00005006864) ENSBIXG00005017121 CRP (ENSBIXG00005017082) ##22 APCS (ENSBIXG00005017069) ##22 OR10J5 (ENSBIXG00005017053) OR10J1 (ENSBIXG00005017037) OR10J4 (ENSBIXG00005017025) ENSBIXG00005002759 OR10J3 (ENSBIXG00005016990) ENSBIXG00005016973 ENSBIXG00005016944 ENSBIXG00005016871 CADM3 (ENSBIXG00005016922) ENSBIXG00005016857 ENSBIXG00005016852 ENSBIXG00005002721 OR6N2 (ENSBIXG00005016832) OR6N1 (ENSBIXG00005006387) Cow MODERN SPECIES 22 ATP1A4 (ENSBTAG00000038523) ATP1A2 (ENSBTAG00000010551) IGSF8 (ENSBTAG00000009982) KCNJ9 (ENSBTAG00000024507) KCNJ10 (ENSBTAG00000002414) ENSBTAG00000052815 PIGM (ENSBTAG00000002419) SLAMF9 (ENSBTAG00000007241) IGSF9 (ENSBTAG00000001481) TAGLN2 (ENSBTAG00000002068) CFAP45 (ENSBTAG00000018487) VSIG8 (ENSBTAG00000010670) SLAMF8 (ENSBTAG00000016698) FCRL6 (ENSBTAG00000017786) DUSP23 (ENSBTAG00000004776) CRP (ENSBTAG00000013907) ##22 APCS (ENSBTAG00000019616) ##22 OR10J5 (ENSBTAG00000019038) OR10J1 (ENSBTAG00000054704) OR10J4 (ENSBTAG00000019618) OR10J1 (ENSBTAG00000054539) OR10J3 (ENSBTAG00000012886) FCER1A (ENSBTAG00000012887) OR10J2 (ENSBTAG00000054463) MPTX1 (ENSBTAG00000012884) ##22 ACKR1 (ENSBTAG00000003220) CADM3 (ENSBTAG00000003217) ENSBTAG00000011511 OR10AA1 (ENSBTAG00000052448) OR10AA1C (ENSBTAG00000051178) OR6N2 (ENSBTAG00000012437) American bison MODERN SPECIES 3157 ATP1A4 (ENSBBBG00000020982) ATP1A2 (ENSBBBG00000021037) IGSF8 (ENSBBBG00000021074) KCNJ9 (ENSBBBG00000008179) ENSBBBG00000021084 KCNJ10 (ENSBBBG00000021092) PIGM (ENSBBBG00000007328) SLAMF9 (ENSBBBG00000021116) IGSF9 (ENSBBBG00000021170) ENSBBBG00000021186 CFAP45 (ENSBBBG00000021204) VSIG8 (ENSBBBG00000007017) ENSBBBG00000021221 ENSBBBG00000021226 DUSP23 (ENSBBBG00000021239) CRP (ENSBBBG00000005680) ##22 APCS (ENSBBBG00000021254) ##22 OR10J5 (ENSBBBG00000005683) OR10J1 (ENSBBBG00000005685) ENSBBBG00000021266 OR10J3 (ENSBBBG00000021271) FCER1A (ENSBBBG00000021277) ENSBBBG00000021290 ENSBBBG00000021292 ##22 ACKR1 (ENSBBBG00000007472) CADM3 (ENSBBBG00000021327) ENSBBBG00000021475 ENSBBBG00000005722 ENSBBBG00000021486 OR6N2 (ENSBBBG00000021491) OR6N1 (ENSBBBG00000021496) Siberian musk deer MODERN SPECIES 1202 CASQ1 (ENSMMSG00000022317) ATP1A4 (ENSMMSG00000022343) ATP1A2 (ENSMMSG00000022405) IGSF8 (ENSMMSG00000022434) KCNJ9 (ENSMMSG00000022446) ENSMMSG00000022453 PIGM (ENSMMSG00000022464) SLAMF9 (ENSMMSG00000022472) IGSF9 (ENSMMSG00000022490) ENSMMSG00000022522 CFAP45 (ENSMMSG00000022539) VSIG8 (ENSMMSG00000022583) SLAMF8 (ENSMMSG00000022599) FCRL6 (ENSMMSG00000022621) DUSP23 (ENSMMSG00000022636) CRP (ENSMMSG00000022649) ##22 APCS (ENSMMSG00000022674) ##22 OR10J5 (ENSMMSG00000017905) OR10J1 (ENSMMSG00000017920) ENSMMSG00000017939 OR10J3 (ENSMMSG00000017973) FCER1A (ENSMMSG00000017993) ENSMMSG00000018017 ENSMMSG00000018052 ##22 ENSMMSG00000018083 CADM3 (ENSMMSG00000018118) ENSMMSG00000018195 ENSMMSG00000018229 ENSMMSG00000018242 OR6N2 (ENSMMSG00000018251) OR6N1 (ENSMMSG00000018261) Cetacea ANCESTRAL SPECIES ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.f ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00940000161240 ENSGT00940000154227.a.a.d ENSGT00940000161377.y.a ENSGT00940000164339 ENSGT00940000154227.a.a.c.b Blue whale MODERN SPECIES PEA15 (ENSBMSG00010004198) DCAF8 (ENSBMSG00010004164) CASQ1 (ENSBMSG00010004131) ATP1A4 (ENSBMSG00010004094) ATP1A2 (ENSBMSG00010004045) IGSF8 (ENSBMSG00010004031) KCNJ9 (ENSBMSG00010004026) ENSBMSG00010004017 IGSF9 (ENSBMSG00010004001) TAGLN2 (ENSBMSG00010003989) CFAP45 (ENSBMSG00010003982) VSIG8 (ENSBMSG00010003973) SLAMF8 (ENSBMSG00010003959) DUSP23 (ENSBMSG00010003926) ENSBMSG00010003919 CRP (ENSBMSG00010003910) ##22 ENSBMSG00010003896 OR10J3 (ENSBMSG00010003881) FCER1A (ENSBMSG00010003865) ENSBMSG00010003852 ##22 ACKR1 (ENSBMSG00010003846) CADM3 (ENSBMSG00010003820) ENSBMSG00010003801 SPTA1 (ENSBMSG00010003731) ENSBMSG00010003703 ENSBMSG00010003699 OR10K2 (ENSBMSG00010003694) OR10R2 (ENSBMSG00010003685) ENSBMSG00010003679 CD1E (ENSBMSG00010003526) ENSBMSG00010003495 Odontoceti ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.f ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00940000161240 ENSGT00940000154227.a.a.d ENSGT00940000161377.y.b ENSGT00940000161377.y.a ENSGT00940000164339 ENSGT00390000018829.g.b.c.b Odontoceti_a ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.f ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00940000161240 ENSGT00940000154227.a.a.d ENSGT00940000161377.y.a ENSGT00940000164339 ENSGT00390000018829.g.b.c.b ENSGT01100000263475.d.a.g.a.b ENSGT00940000155795 ENSGT00940000161974 Odontoceti_b ANCESTRAL SPECIES ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.f ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00940000161240 ENSGT00940000161377.y.a ENSGT00940000164339 ENSGT00390000018829.g.b.c.b ENSGT01100000263475.d.a.g.a.b ENSGT00940000155795 ENSGT00940000161974 ENSGT01050000244808.D.fb.b.a.b Monodontidae ANCESTRAL SPECIES ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886.f ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00940000161240 ENSGT00940000161377.y.a ENSGT01100000263475.d.a.g.a.b ENSGT00940000155795 ENSGT00940000161974 ENSGT01050000244808.D.fb.b.a.b ENSGT01050000244808.D.fb.b.b.b ENSGT01050000244808.D.fb.b.a.a.a.a Beluga whale MODERN SPECIES 69 ATP1A2 (ENSDLEG00000013584) IGSF8 (ENSDLEG00000013569) KCNJ9 (ENSDLEG00000013552) ENSDLEG00000013536 ENSDLEG00000013525 KCNJ10 (ENSDLEG00000013520) PIGM (ENSDLEG00000013517) SLAMF9 (ENSDLEG00000013501) IGSF9 (ENSDLEG00000013172) TAGLN2 (ENSDLEG00000013111) CFAP45 (ENSDLEG00000012985) VSIG8 (ENSDLEG00000012956) SLAMF8 (ENSDLEG00000012945) ENSDLEG00000012937 DUSP23 (ENSDLEG00000012930) CRP (ENSDLEG00000012922) ##22 ENSDLEG00000012913 OR10J3 (ENSDLEG00000012609) FCER1A (ENSDLEG00000012546) ACKR1 (ENSDLEG00000012535) CADM3 (ENSDLEG00000012524) ENSDLEG00000012517 SPTA1 (ENSDLEG00000011328) ENSDLEG00000011237 ENSDLEG00000011215 CD1B (ENSDLEG00000011018) KIRREL1 (ENSDLEG00000010975) CD5L (ENSDLEG00000010959) ENSDLEG00000010948 ENSDLEG00000010933 ENSDLEG00000010915 Sperm whale MODERN SPECIES 15 NHLH1 (ENSPCTG00005001785) NCSTN (ENSPCTG00005001806) COPA (ENSPCTG00005001916) PEX19 (ENSPCTG00005002201) DCAF8 (ENSPCTG00005002235) PEA15 (ENSPCTG00005002277) ENSPCTG00005002292 ATP1A2 (ENSPCTG00005002328) IGSF8 (ENSPCTG00005002378) KCNJ9 (ENSPCTG00005002389) ENSPCTG00005002406 CFAP45 (ENSPCTG00005002458) VSIG8 (ENSPCTG00005002489) SLAMF8 (ENSPCTG00005002506) DUSP23 (ENSPCTG00005002559) CRP (ENSPCTG00005002569) ##22 ENSPCTG00005002583 APCS (ENSPCTG00005002592) ##22 ENSPCTG00005002613 ENSPCTG00005002622 OR10J3 (ENSPCTG00005002639) FCER1A (ENSPCTG00005002651) ENSPCTG00005002662 ACKR1 (ENSPCTG00005002668) CADM3 (ENSPCTG00005002690) ENSPCTG00005002719 ENSPCTG00005002728 ENSPCTG00005002740 OR6N2 (ENSPCTG00005002751) SPTA1 (ENSPCTG00005002796) OR10R2 (ENSPCTG00005002855) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00860000136134.b ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00860000136134.b ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a Equus ANCESTRAL SPECIES 3 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00860000136134.b ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.a.a.a.a ENSGT00390000013296.a.a.a.a.b Horse MODERN SPECIES 26 DCAF8 (ENSECAG00000007978) PEA15 (ENSECAG00000019187) CASQ1 (ENSECAG00000019807) ATP1A4 (ENSECAG00000024542) ATP1A2 (ENSECAG00000024827) IGSF8 (ENSECAG00000022195) KCNJ9 (ENSECAG00000030879) KCNJ10 (ENSECAG00000058067) PIGM (ENSECAG00000058392) SLAMF9 (ENSECAG00000022218) IGSF9 (ENSECAG00000023765) CFAP45 (ENSECAG00000014880) TAGLN2 (ENSECAG00000010107) SLAMF8 (ENSECAG00000023720) FCRL6 (ENSECAG00000024610) CRP (ENSECAG00000024874) ##22 DUSP23 (ENSECAG00000024776) ENSECAG00000046419 ENSECAG00000051429 OR10J1 (ENSECAG00000040571) OR10J4 (ENSECAG00000054331) OR10J2 (ENSECAG00000034321) OR10J7 (ENSECAG00000005575) FCER1A (ENSECAG00000008710) MPTX1 (ENSECAG00000009260) ##22 ACKR1 (ENSECAG00000000874) CADM3 (ENSECAG00000009553) AIM2 (ENSECAG00000014480) ENSECAG00000014696 ENSECAG00000052401 ENSECAG00000058447 Donkey MODERN SPECIES 17 ATP1A4 (ENSEASG00005002539) ATP1A2 (ENSEASG00005002641) IGSF8 (ENSEASG00005003188) KCNJ9 (ENSEASG00005003190) KCNJ10 (ENSEASG00005029215) PIGM (ENSEASG00005003195) ENSEASG00005003200 SLAMF9 (ENSEASG00005003205) IGSF9 (ENSEASG00005003211) TAGLN2 (ENSEASG00005003221) CFAP45 (ENSEASG00005003225) VSIG8 (ENSEASG00005003234) SLAMF8 (ENSEASG00005003238) FCRL6 (ENSEASG00005033326) DUSP23 (ENSEASG00005027029) CRP (ENSEASG00005033075) ##22 APCS (ENSEASG00005003250) ##22 OR10J5 (ENSEASG00005003258) OR10J1 (ENSEASG00005003259) OR10J4 (ENSEASG00005003261) ENSEASG00005036276 OR10J3 (ENSEASG00005003270) FCER1A (ENSEASG00005003275) ENSEASG00005037234 ENSEASG00005003280 ACKR1 (ENSEASG00005003282) CADM3 (ENSEASG00005003284) AIM2 (ENSEASG00005003291) ENSEASG00005003292 ENSEASG00005003295 ENSEASG00005003298 Carnivora ANCESTRAL SPECIES 14 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b ENSGT00940000158895.c.a Caniformia ANCESTRAL SPECIES 10 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b ENSGT00940000158895.c.a Caniformia_b ANCESTRAL SPECIES 8 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b ENSGT00940000158895.c.a Ursidae ANCESTRAL SPECIES 4 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b.c ENSGT00940000158895.c.a ENSGT00940000158895.c.b Ursus ANCESTRAL SPECIES 112 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00860000136134.a ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 American black bear MODERN SPECIES 290 KCNJ9 (ENSUAMG00000012183) KCNJ10 (ENSUAMG00000012181) PIGM (ENSUAMG00000012180) SLAMF9 (ENSUAMG00000012178) ENSUAMG00000012175 ENSUAMG00000012174 TAGLN2 (ENSUAMG00000012172) CFAP45 (ENSUAMG00000012168) VSIG8 (ENSUAMG00000012164) SLAMF8 (ENSUAMG00000012163) ENSUAMG00000012161 DUSP23 (ENSUAMG00000012160) CRP (ENSUAMG00000012159) ##22 Giant Panda MODERN SPECIES 18 PEX19 (ENSAMEG00000028645) DCAF8 (ENSAMEG00000014293) PEA15 (ENSAMEG00000014346) ENSAMEG00000014164 ATP1A2 (ENSAMEG00000013987) ENSAMEG00000013980 ENSAMEG00000023557 ENSAMEG00000013971 IGSF9 (ENSAMEG00000013950) ENSAMEG00000013938 CFAP45 (ENSAMEG00000009487) VSIG8 (ENSAMEG00000009481) SLAMF8 (ENSAMEG00000009477) FCRL6 (ENSAMEG00000009469) ENSAMEG00000030785 CRP (ENSAMEG00000024961) ##22 ENSAMEG00000015684 APCS (ENSAMEG00000024563) ##22 ENSAMEG00000019527 OR10J4 (ENSAMEG00000015694) FCER1A (ENSAMEG00000004132) ENSAMEG00000018629 ACKR1 (ENSAMEG00000026437) CADM3 (ENSAMEG00000004103) ENSAMEG00000004077 MNDA (ENSAMEG00000029285) ENSAMEG00000026507 ENSAMEG00000031107 ENSAMEG00000004074 OR6N2 (ENSAMEG00000018617) OR6N1 (ENSAMEG00000018607) Mustelinae ANCESTRAL SPECIES 23 ENSGT00390000010993 ENSGT00950000182900.D.d.a ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b Ferret MODERN SPECIES 385 DCAF8 (ENSMPUG00000013949) PEA15 (ENSMPUG00000013933) CASQ1 (ENSMPUG00000013930) ATP1A4 (ENSMPUG00000013901) ATP1A2 (ENSMPUG00000013193) IGSF8 (ENSMPUG00000013188) KCNJ9 (ENSMPUG00000013180) KCNJ10 (ENSMPUG00000019472) SLAMF9 (ENSMPUG00000013175) ENSMPUG00000019471 IGSF9 (ENSMPUG00000013170) ENSMPUG00000013160 CFAP45 (ENSMPUG00000013148) VSIG8 (ENSMPUG00000013132) SLAMF8 (ENSMPUG00000013124) CRP (ENSMPUG00000013109) ##22 APCS (ENSMPUG00000013103) ##22 OR10J1 (ENSMPUG00000019470) OR10J4 (ENSMPUG00000019469) ENSMPUG00000019468 OR10J3 (ENSMPUG00000019467) ENSMPUG00000013100 ENSMPUG00000019466 ACKR1 (ENSMPUG00000013096) CADM3 (ENSMPUG00000013089) ENSMPUG00000013084 ENSMPUG00000013078 OR6N2 (ENSMPUG00000019465) OR6N1 (ENSMPUG00000019464) OR6K6 (ENSMPUG00000019463) ENSMPUG00000019462 Canidae ANCESTRAL SPECIES 36 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444.a ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b.a ENSGT00390000018908.b.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b Canis_lupus ANCESTRAL SPECIES 33 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444.a ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000165113 ENSGT00940000163968 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00390000018908.b.a ENSGT00390000018908.b.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164490 Dingo MODERN SPECIES 275 CASQ1 (ENSCAFG00020019977) ATP1A4 (ENSCAFG00020019849) ATP1A2 (ENSCAFG00020019829) IGSF8 (ENSCAFG00020019825) KCNJ9 (ENSCAFG00020019821) KCNJ10 (ENSCAFG00020019817) PIGM (ENSCAFG00020019816) SLAMF9 (ENSCAFG00020019812) IGSF9 (ENSCAFG00020019761) TAGLN2 (ENSCAFG00020019746) CFAP45 (ENSCAFG00020019737) VSIG8 (ENSCAFG00020019727) ENSCAFG00020019724 ENSCAFG00020019722 DUSP23 (ENSCAFG00020019718) CRP (ENSCAFG00020019716) ##22 ENSCAFG00020019714 ENSCAFG00020019709 ENSCAFG00020019705 OR10J5 (ENSCAFG00020019704) FCER1A (ENSCAFG00020019698) ACKR1 (ENSCAFG00020019686) CADM3 (ENSCAFG00020019664) ENSCAFG00020019645 ENSCAFG00020019657 ENSCAFG00020019641 ENSCAFG00020019640 OR6N1 (ENSCAFG00020019638) OR6K6 (ENSCAFG00020019636) ENSCAFG00020019631 ENSCAFG00020019629 Dog MODERN SPECIES 31 PEA15 (ENSCAFG00845030704) ENSCAFG00845030715 ATP1A4 (ENSCAFG00845030760) IGSF8 (ENSCAFG00845030820) KCNJ9 (ENSCAFG00845030853) KCNJ10 (ENSCAFG00845030876) PIGM (ENSCAFG00845030888) SLAMF9 (ENSCAFG00845030895) IGSF9 (ENSCAFG00845030923) TAGLN2 (ENSCAFG00845030944) CFAP45 (ENSCAFG00845030963) VSIG8 (ENSCAFG00845030977) SLAMF8 (ENSCAFG00845030981) FCRL6 (ENSCAFG00845030986) DUSP23 (ENSCAFG00845030988) CRP (ENSCAFG00845030990) ##22 OR10J14 (ENSCAFG00845030993) OR10J5 (ENSCAFG00845030996) OR10J4 (ENSCAFG00845015233) ENSCAFG00845015260 FCER1A (ENSCAFG00845015284) OR10J2 (ENSCAFG00845015314) ACKR1 (ENSCAFG00845015336) CADM3 (ENSCAFG00845015444) ENSCAFG00845015829 OR10AA2 (ENSCAFG00845015939) OR10AA5 (ENSCAFG00845015959) OR6N2 (ENSCAFG00845015982) OR6N1 (ENSCAFG00845015998) OR6K6 (ENSCAFG00845016012) OR6K5 (ENSCAFG00845016030) Red fox MODERN SPECIES 219 CASQ1 (ENSVVUG00000016139) ATP1A4 (ENSVVUG00000016182) IGSF8 (ENSVVUG00000016245) KCNJ9 (ENSVVUG00000016255) KCNJ10 (ENSVVUG00000016261) PIGM (ENSVVUG00000016270) SLAMF9 (ENSVVUG00000016282) ENSVVUG00000016286 ENSVVUG00000016298 TAGLN2 (ENSVVUG00000016302) CFAP45 (ENSVVUG00000016307) VSIG8 (ENSVVUG00000016314) SLAMF8 (ENSVVUG00000016330) ENSVVUG00000016335 DUSP23 (ENSVVUG00000016337) CRP (ENSVVUG00000016340) ##22 ENSVVUG00000016344 ENSVVUG00000016358 ENSVVUG00000016363 ENSVVUG00000016370 OR10J3 (ENSVVUG00000016374) ENSVVUG00000016378 ACKR1 (ENSVVUG00000016389) CADM3 (ENSVVUG00000016393) ENSVVUG00000016399 ENSVVUG00000016401 ENSVVUG00000016408 ENSVVUG00000016412 OR6N1 (ENSVVUG00000016415) OR6K6 (ENSVVUG00000016416) ENSVVUG00000016420 Felidae ANCESTRAL SPECIES 11 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 Panthera ANCESTRAL SPECIES 32 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 Panthera_a ANCESTRAL SPECIES 42 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00860000136134.a ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163968 ENSGT00940000163654 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.a ENSGT00390000013296.a.b.a ENSGT00940000158895.c.a ENSGT00940000158895.c.b leopard MODERN SPECIES 151 DCAF8 (ENSPPRG00000007508) PEA15 (ENSPPRG00000007830) CASQ1 (ENSPPRG00000008086) ATP1A4 (ENSPPRG00000008985) ATP1A2 (ENSPPRG00000009924) IGSF8 (ENSPPRG00000010316) KCNJ9 (ENSPPRG00000010763) ENSPPRG00000010796 IGSF9 (ENSPPRG00000014348) TAGLN2 (ENSPPRG00000015772) CFAP45 (ENSPPRG00000017256) VSIG8 (ENSPPRG00000018099) SLAMF8 (ENSPPRG00000019672) ENSPPRG00000019982 DUSP23 (ENSPPRG00000022051) CRP (ENSPPRG00000017530) ##22 OR10J5 (ENSPPRG00000017550) OR10J1 (ENSPPRG00000017571) OR10J4 (ENSPPRG00000024602) ENSPPRG00000017606 ENSPPRG00000017645 ENSPPRG00000023825 ACKR1 (ENSPPRG00000023790) CADM3 (ENSPPRG00000023727) ENSPPRG00000023497 ENSPPRG00000017665 OR6N2 (ENSPPRG00000017684) OR6N1 (ENSPPRG00000017699) ENSPPRG00000017707 ENSPPRG00000022705 OR6K2 (ENSPPRG00000017721) Tiger MODERN SPECIES 198 ENSPTIG00000018902 TAGLN2 (ENSPTIG00000018079) CFAP45 (ENSPTIG00000015852) VSIG8 (ENSPTIG00000015260) SLAMF8 (ENSPTIG00000015058) FCRL6 (ENSPTIG00000012925) CRP (ENSPTIG00000006220) ##22 ENSPTIG00000012230 ##22 OR10J1 (ENSPTIG00000006198) ENSPTIG00000006183 ENSPTIG00000008539 ACKR1 (ENSPTIG00000007669) CADM3 (ENSPTIG00000005553) ENSPTIG00000003789 OR6N2 (ENSPTIG00000006140) OR6N1 (ENSPTIG00000006133) ENSPTIG00000006129 ENSPTIG00000006108 OR6K2 (ENSPTIG00000006104) SPTA1 (ENSPTIG00000017529) OR10Z1 (ENSPTIG00000006076) ENSPTIG00000006065 Cat MODERN SPECIES 248 PEA15 (ENSFCAG00000003924) CASQ1 (ENSFCAG00000003923) ATP1A4 (ENSFCAG00000005397) IGSF8 (ENSFCAG00000003922) KCNJ9 (ENSFCAG00000015120) KCNJ10 (ENSFCAG00000043392) PIGM (ENSFCAG00000008535) IGSF9 (ENSFCAG00000031301) TAGLN2 (ENSFCAG00000016255) CFAP45 (ENSFCAG00000008529) VSIG8 (ENSFCAG00000008527) SLAMF8 (ENSFCAG00000008526) FCRL6 (ENSFCAG00000027611) DUSP23 (ENSFCAG00000044162) ENSFCAG00000031034 CRP (ENSFCAG00000029168) ##22 APCS (ENSFCAG00000010503) ##22 OR10J4 (ENSFCAG00000023747) ENSFCAG00000023051 OR10J3 (ENSFCAG00000029247) FCER1A (ENSFCAG00000015276) ACKR1 (ENSFCAG00000018619) CADM3 (ENSFCAG00000015269) ENSFCAG00000031916 ENSFCAG00000052900 OR6N2 (ENSFCAG00000044911) ENSFCAG00000015615 ENSFCAG00000013455 ENSFCAG00000013454 OR6K3 (ENSFCAG00000040462) ENSFCAG00000013453 Atlantogenata ANCESTRAL SPECIES 15 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.b ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a Xenarthra ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1974 ENSDNOG00000034795 ##22 Armadillo MODERN SPECIES 3642 ENSDNOG00000045984 ##22 Afrotheria ANCESTRAL SPECIES 87 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000164490 Afrotheria_a ANCESTRAL SPECIES 89 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.A.a ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.h.a.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296.a.b.a ENSGT00390000018908.a.a ENSGT00390000018908.a.b ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000164490 Elephant MODERN SPECIES 325 PEA15 (ENSLAFG00000022152) CASQ1 (ENSLAFG00000006462) ATP1A4 (ENSLAFG00000000495) ATP1A2 (ENSLAFG00000000490) IGSF8 (ENSLAFG00000000487) KCNJ10 (ENSLAFG00000022248) PIGM (ENSLAFG00000000484) SLAMF9 (ENSLAFG00000023241) IGSF9 (ENSLAFG00000030174) TAGLN2 (ENSLAFG00000020779) CFAP45 (ENSLAFG00000004137) VSIG8 (ENSLAFG00000007599) SLAMF8 (ENSLAFG00000001163) ENSLAFG00000026692 DUSP23 (ENSLAFG00000014105) CRP (ENSLAFG00000029698) ##22 APCS (ENSLAFG00000030778) ##22 OR10J5 (ENSLAFG00000021971) OR10J1 (ENSLAFG00000014770) ENSLAFG00000031436 ENSLAFG00000025733 ENSLAFG00000030660 FCER1A (ENSLAFG00000004222) ENSLAFG00000020848 ##22 ACKR1 (ENSLAFG00000031828) CADM3 (ENSLAFG00000005683) MNDA (ENSLAFG00000002774) ENSLAFG00000001038 ENSLAFG00000032373 OR6N2 (ENSLAFG00000011136) OR6N1 (ENSLAFG00000014379) Hyrax MODERN SPECIES 8306 CRP (ENSPCAG00000003682) ##22 Marsupialia ANCESTRAL SPECIES 3 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b ##22 ENSGT00940000159272.B ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 ENSGT00940000164179.a Opossum DUPLICATION Opossum DUPLICATION Opossum MODERN SPECIES 1 ENSMODG00000048513 ENSMODG00000038117 ENSMODG00000010352 SPTA1 (ENSMODG00000010331) ENSMODG00000047632 ENSMODG00000025667 ENSMODG00000010269 ENSMODG00000044063 ENSMODG00000010260 OR6K6 (ENSMODG00000010249) OR6N1 (ENSMODG00000010206) ENSMODG00000010169 ENSMODG00000027491 CADM3 (ENSMODG00000010160) ENSMODG00000042514 ENSMODG00000048715 ##22 ENSMODG00000045089 ##22 ENSMODG00000010060 ENSMODG00000010143 OR10J3 (ENSMODG00000010132) ENSMODG00000044389 OR10J4 (ENSMODG00000042252) OR10J1 (ENSMODG00000049391) APCS (ENSMODG00000038936) ##22 ENSMODG00000041605 ENSMODG00000037938 ENSMODG00000010057 DUSP23 (ENSMODG00000010053) SLAMF8 (ENSMODG00000010050) VSIG8 (ENSMODG00000010046) CFAP45 (ENSMODG00000010039) Opossum MODERN SPECIES 1 ENSMODG00000038117 ENSMODG00000010352 SPTA1 (ENSMODG00000010331) ENSMODG00000047632 ENSMODG00000025667 ENSMODG00000010269 ENSMODG00000044063 ENSMODG00000010260 OR6K6 (ENSMODG00000010249) OR6N1 (ENSMODG00000010206) ENSMODG00000010169 ENSMODG00000027491 CADM3 (ENSMODG00000010160) ENSMODG00000042514 ENSMODG00000048715 ##22 ENSMODG00000045089 ##22 ENSMODG00000010060 ENSMODG00000010143 OR10J3 (ENSMODG00000010132) ENSMODG00000044389 OR10J4 (ENSMODG00000042252) OR10J1 (ENSMODG00000049391) APCS (ENSMODG00000038936) ##22 ENSMODG00000041605 ENSMODG00000037938 ENSMODG00000010057 DUSP23 (ENSMODG00000010053) SLAMF8 (ENSMODG00000010050) VSIG8 (ENSMODG00000010046) CFAP45 (ENSMODG00000010039) TAGLN2 (ENSMODG00000048991) Opossum MODERN SPECIES 255 ENSMODG00000022529 ##22 Marsupialia_b DUPLICATION Marsupialia_b DUPLICATION Marsupialia_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b.g.a ##22 Diprotodontia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b.g.a ##22 Wallaby DUPLICATION Wallaby MODERN SPECIES 10682 ENSMEUG00000015267 ##22 Wallaby MODERN SPECIES 12450 ENSMEUG00000002695 ##22 Diprotodontia_a ANCESTRAL SPECIES 28 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.fb.b.a.a.a.b ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B.y ENSGT00940000159272.B.z ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870.j ENSGT00940000162870.i ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 koala MODERN SPECIES 321 TAGLN2 (ENSPCIG00000027101) CFAP45 (ENSPCIG00000027096) VSIG8 (ENSPCIG00000027092) SLAMF8 (ENSPCIG00000027089) ENSPCIG00000027083 DUSP23 (ENSPCIG00000027081) CRP (ENSPCIG00000017685) ##22 ENSPCIG00000027076 ENSPCIG00000027074 ENSPCIG00000027073 ##22 OR10J4 (ENSPCIG00000027072) ENSPCIG00000034011 ENSPCIG00000023551 ENSPCIG00000000808 ENSPCIG00000000797 CADM3 (ENSPCIG00000000771) ENSPCIG00000000741 OR6N2 (ENSPCIG00000000726) OR6N1 (ENSPCIG00000000718) OR6K6 (ENSPCIG00000000697) ENSPCIG00000034726 ENSPCIG00000000639 Tasmanian devil MODERN SPECIES 3 CASQ1 (ENSSHAG00000008276) ATP1A4 (ENSSHAG00000029666) ENSSHAG00000009196 IGSF8 (ENSSHAG00000009735) ENSSHAG00000028824 PIGM (ENSSHAG00000025008) ENSSHAG00000028223 ENSSHAG00000010826 IGSF9 (ENSSHAG00000011017) TAGLN2 (ENSSHAG00000021986) CFAP45 (ENSSHAG00000011462) VSIG8 (ENSSHAG00000011914) SLAMF8 (ENSSHAG00000012172) ENSSHAG00000030943 ENSSHAG00000032205 CRP (ENSSHAG00000032180) ##22 ENSSHAG00000024036 ##22 OR10J1 (ENSSHAG00000002709) OR10J4 (ENSSHAG00000030278) ENSSHAG00000001073 OR10J3 (ENSSHAG00000000674) ENSSHAG00000000029 ENSSHAG00000001432 ENSSHAG00000026175 ENSSHAG00000005599 OR6N2 (ENSSHAG00000007579) OR6N1 (ENSSHAG00000007790) OR6K6 (ENSSHAG00000008099) ENSSHAG00000008771 ENSSHAG00000020733 ENSSHAG00000030433 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 Diprotodontia ANCESTRAL SPECIES 30 ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870 ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000163011 Diprotodontia_a ANCESTRAL SPECIES 28 ENSGT00940000162378 ENSGT00940000159936 ENSGT00940000161314 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00390000017728 ENSGT01030000234540.B.a.a.a.b.a.b.a ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01050000244808.D.fb.b.a.a.a.b ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.h.b.g.b ##22 ENSGT00940000159272.B.y ENSGT00940000159272.B.z ENSGT01100000263515.a.b.a.b.b.h.a.a ##22 ENSGT00940000163973 ENSGT00940000165113 ENSGT00940000163654 ENSGT00940000162870.j ENSGT00940000162870.i ENSGT01050000244808.A.b.a.b ENSGT00940000159272.A ENSGT00390000006372 ENSGT00940000159779 ENSGT00390000013296 ENSGT00390000018908 ENSGT00940000158895.c.a Common wonbat MODERN SPECIES 1070 ENSVURG00010002197 ATP1A4 (ENSVURG00010002214) ATP1A2 (ENSVURG00010002235) IGSF8 (ENSVURG00010002261) KCNJ9 (ENSVURG00010002274) KCNJ10 (ENSVURG00010002293) PIGM (ENSVURG00010002300) ENSVURG00010002305 IGSF9 (ENSVURG00010002314) TAGLN2 (ENSVURG00010002337) CFAP45 (ENSVURG00010002351) VSIG8 (ENSVURG00010002373) SLAMF8 (ENSVURG00010002381) ENSVURG00010002392 DUSP23 (ENSVURG00010002433) CRP (ENSVURG00010002451) ##22 ENSVURG00010002472 ENSVURG00010002492 ENSVURG00010002501 ##22 OR10J1 (ENSVURG00010002506) OR10J4 (ENSVURG00010002513) ENSVURG00010002517 ENSVURG00010002521 ENSVURG00010002530 ENSVURG00010002535 ENSVURG00010002551 ENSVURG00010002561 ##22 ENSVURG00010002567 ##22 ENSVURG00010002572 ENSVURG00010002577 CADM3 (ENSVURG00010002602) Wallaby MODERN SPECIES 13814 ENSMEUG00000011915 ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b.h ##22 Diprotodontia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b.h ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.b.h ##22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1070 VSIG8 (ENSVURG00010002373) SLAMF8 (ENSVURG00010002381) ENSVURG00010002392 DUSP23 (ENSVURG00010002433) CRP (ENSVURG00010002451) ##22 ENSVURG00010002472 ENSVURG00010002492 ENSVURG00010002501 ##22 OR10J1 (ENSVURG00010002506) OR10J4 (ENSVURG00010002513) ENSVURG00010002517 ENSVURG00010002521 ENSVURG00010002530 ENSVURG00010002535 ENSVURG00010002551 ENSVURG00010002561 ##22 ENSVURG00010002567 ##22 ENSVURG00010002572 ENSVURG00010002577 CADM3 (ENSVURG00010002602) ENSVURG00010002641 ENSVURG00010002659 ENSVURG00010002667 OR6N2 (ENSVURG00010002675) OR6N1 (ENSVURG00010002688) OR6K6 (ENSVURG00010002707) ENSVURG00010002714 ENSVURG00010002720 ENSVURG00010002731 ENSVURG00010002736 SPTA1 (ENSVURG00010002758) Common wonbat MODERN SPECIES 1070 ENSVURG00010002897 SPTA1 (ENSVURG00010002758) ENSVURG00010002736 ENSVURG00010002731 ENSVURG00010002720 ENSVURG00010002714 OR6K6 (ENSVURG00010002707) OR6N1 (ENSVURG00010002688) OR6N2 (ENSVURG00010002675) ENSVURG00010002667 ENSVURG00010002659 ENSVURG00010002641 CADM3 (ENSVURG00010002602) ENSVURG00010002577 ENSVURG00010002572 ENSVURG00010002567 ##22 ENSVURG00010002561 ##22 ENSVURG00010002551 ENSVURG00010002535 ENSVURG00010002530 ENSVURG00010002521 ENSVURG00010002517 OR10J4 (ENSVURG00010002513) OR10J1 (ENSVURG00010002506) ENSVURG00010002501 ##22 ENSVURG00010002492 ENSVURG00010002472 CRP (ENSVURG00010002451) ##22 DUSP23 (ENSVURG00010002433) ENSVURG00010002392 SLAMF8 (ENSVURG00010002381) Platypus DUPLICATION Platypus MODERN SPECIES 88 ATP1A2 (ENSOANG00000048435) IGSF8 (ENSOANG00000037056) KCNJ9 (ENSOANG00000039350) KCNJ10 (ENSOANG00000045748) ENSOANG00000008440 ENSOANG00000038622 ENSOANG00000041895 ENSOANG00000042932 ENSOANG00000041963 TAGLN2 (ENSOANG00000037012) CFAP45 (ENSOANG00000015279) VSIG8 (ENSOANG00000047790) ENSOANG00000039159 ITLN1 (ENSOANG00000050751) DUSP23 (ENSOANG00000037317) ENSOANG00000042086 ##22 ENSOANG00000047984 CADM3 (ENSOANG00000040428) ENSOANG00000005485 ENSOANG00000021732 ENSOANG00000005968 SPTA1 (ENSOANG00000013338) ENSOANG00000046305 ENSOANG00000050514 ENSOANG00000005456 ENSOANG00000039037 ENSOANG00000042129 ENSOANG00000003027 ENSOANG00000007760 ENSOANG00000039094 ENSOANG00000002139 Platypus MODERN SPECIES 88 H1-1 (ENSOANG00000050321) ENSOANG00000042346 ENSOANG00000036615 ENSOANG00000041825 ENSOANG00000043122 ENSOANG00000046504 ENSOANG00000037583 ENSOANG00000037044 ENSOANG00000038173 ENSOANG00000050874 ENSOANG00000006821 ENSOANG00000049510 ENSOANG00000000203 ENSOANG00000049078 ENSOANG00000000206 ENSOANG00000000207 ##22 ENSOANG00000000208 ENSOANG00000000209 ENSOANG00000000214 ENSOANG00000040795 ENSOANG00000041663 ENSOANG00000045836 ENSOANG00000038023 ENSOANG00000050854 ENSOANG00000050360 ENSOANG00000045256 ENSOANG00000040147 ENSOANG00000045877 ENSOANG00000000219 ENSOANG00000047522 ENSOANG00000038285 Sauria DUPLICATION Sauria DUPLICATION Sauria ANCESTRAL SPECIES 66 ENSGT00940000158549 ENSGT00390000008744 ENSGT00940000155545.a ENSGT00390000008196 ENSGT00390000003308.b ENSGT00940000160641 ENSGT00530000064299 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.e.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000158895.c.a ENSGT00940000158895.c.b Archelosauria ANCESTRAL SPECIES 225 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.e.a ##22 Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a.d ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 ENSGT00530000064299 ENSGT00940000160641 Emydidae ANCESTRAL SPECIES 18 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329.e ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263573.b.b.ub ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 ENSGT00990000212918 ENSGT01100000263505.b.b.a.a.a.b.c.a painted turtle MODERN SPECIES 1639 ENSCPBG00000008251 ##22 ENSCPBG00000008244 ##22 Three-toed box turtle MODERN SPECIES 119 ENSTMTG00000006188 CADM3 (ENSTMTG00000006148) ACKR1 (ENSTMTG00000006123) ENSTMTG00000006107 ##22 ENSTMTG00000006098 ##22 ENSTMTG00000006090 ##22 ENSTMTG00000006077 IGSF9 (ENSTMTG00000006012) TAGLN2 (ENSTMTG00000005994) CFAP45 (ENSTMTG00000005975) VSIG8 (ENSTMTG00000005958) SLAMF8 (ENSTMTG00000005935) ENSTMTG00000005926 ENSTMTG00000005912 ENSTMTG00000005886 SDHC (ENSTMTG00000005860) MPZ (ENSTMTG00000005830) ENSTMTG00000005816 ENSTMTG00000005800 ENSTMTG00000005781 Testudinidae ANCESTRAL SPECIES 62 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000165064 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566.c ENSGT00960000193142 ENSGT00940000168190 ENSGT01100000263505.b.b.a.a.a.b.c.a Abingdon island giant tortoise MODERN SPECIES 675 ENSCABG00000019088 ##22 ENSCABG00000019087 ##22 ENSCABG00000019086 ##22 ENSCABG00000019084 IGSF9 (ENSCABG00000019079) ENSCABG00000019072 CFAP45 (ENSCABG00000019070) VSIG8 (ENSCABG00000019068) SLAMF8 (ENSCABG00000019063) Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005015983 CADM3 (ENSGEVG00005015872) ACKR1 (ENSGEVG00005015852) ENSGEVG00005015841 ##22 ENSGEVG00005015829 ##22 ENSGEVG00005015803 ##22 ENSGEVG00005015767 ##22 DUSP23 (ENSGEVG00005015740) ENSGEVG00005015441 ENSGEVG00005015412 CFAP45 (ENSGEVG00005015397) VSIG8 (ENSGEVG00005015351) SLAMF8 (ENSGEVG00005015293) ENSGEVG00005015270 ENSGEVG00005015243 SDHC (ENSGEVG00005015223) ENSGEVG00005015190 ENSGEVG00005015164 ENSGEVG00005015139 PCP4L1 (ENSGEVG00005015103) NR1I3 (ENSGEVG00005014694) Chinese turtle DUPLICATION Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 480 NR1I3 (ENSPSIG00000004437) PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Chinese turtle MODERN SPECIES 480 PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Chinese turtle DUPLICATION Chinese turtle DUPLICATION Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 480 UFC1 (ENSPSIG00000004944) ENSPSIG00000004930 TOMM40L (ENSPSIG00000004743) NR1I3 (ENSPSIG00000004437) PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Chinese turtle MODERN SPECIES 480 USP21 (ENSPSIG00000005034) UFC1 (ENSPSIG00000004944) ENSPSIG00000004930 TOMM40L (ENSPSIG00000004743) NR1I3 (ENSPSIG00000004437) PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Chinese turtle MODERN SPECIES 480 TOMM40L (ENSPSIG00000004743) NR1I3 (ENSPSIG00000004437) PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Chinese turtle MODERN SPECIES 480 ENSPSIG00000004930 TOMM40L (ENSPSIG00000004743) NR1I3 (ENSPSIG00000004437) PCP4L1 (ENSPSIG00000004433) MPZ (ENSPSIG00000004420) SDHC (ENSPSIG00000004408) CFAP126 (ENSPSIG00000004382) ENSPSIG00000000721 SLAMF8 (ENSPSIG00000007715) VSIG8 (ENSPSIG00000007709) CFAP45 (ENSPSIG00000006632) TAGLN2 (ENSPSIG00000006612) IGSF9 (ENSPSIG00000005466) ENSPSIG00000005425 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005063 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000004994 ##22 ACKR1 (ENSPSIG00000004986) CADM3 (ENSPSIG00000004672) ENSPSIG00000000700 ENSPSIG00000004476 ENSPSIG00000004379 ENSPSIG00000004342 Cryptodira ANCESTRAL SPECIES 20 ENSGT00530000064299 ENSGT00940000168190 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00940000167575 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00390000003308.b ENSGT00940000160641 ENSGT00530000064299 ENSGT00940000168190 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01100000263573.b.b.tb ENSGT01030000234540.C ENSGT01030000234540.A.a.a.d ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.b.a ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 Emydidae ANCESTRAL SPECIES 18 ENSGT00530000064299 ENSGT01100000263505.b.b.a.a.a.b.c.a ENSGT00990000212918 ENSGT00940000168190 ENSGT01030000234556.a.b.b ENSGT00390000000566 ENSGT00390000001092 ENSGT01100000263573.b.b.tb ENSGT01100000263573.b.b.ub ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.b.a ENSGT00940000160444 ENSGT00940000161329.e ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00390000006372 ENSGT00940000159779 painted turtle MODERN SPECIES 963 SLAMF8 (ENSCPBG00000011927) VSIG8 (ENSCPBG00000011890) CFAP45 (ENSCPBG00000011874) TAGLN2 (ENSCPBG00000011868) IGSF9 (ENSCPBG00000011861) ENSCPBG00000011859 ENSCPBG00000011855 ##22 ENSCPBG00000011852 CADM3 (ENSCPBG00000011844) Three-toed box turtle MODERN SPECIES 119 TOMM40L (ENSTMTG00000005768) ENSTMTG00000005781 ENSTMTG00000005800 ENSTMTG00000005816 MPZ (ENSTMTG00000005830) SDHC (ENSTMTG00000005860) ENSTMTG00000005886 ENSTMTG00000005912 ENSTMTG00000005926 SLAMF8 (ENSTMTG00000005935) VSIG8 (ENSTMTG00000005958) CFAP45 (ENSTMTG00000005975) TAGLN2 (ENSTMTG00000005994) IGSF9 (ENSTMTG00000006012) ENSTMTG00000006077 ENSTMTG00000006090 ##22 ENSTMTG00000006098 ##22 ENSTMTG00000006107 ##22 ACKR1 (ENSTMTG00000006123) CADM3 (ENSTMTG00000006148) ENSTMTG00000006188 Testudinidae ANCESTRAL SPECIES 62 ENSGT00530000064299 ENSGT01100000263505.b.b.a.a.a.b.c.a ENSGT00940000168190 ENSGT00960000193142 ENSGT00390000000566.c ENSGT00390000001092 ENSGT01100000263573.b.b.tb ENSGT01030000234540.C ENSGT00940000161712 ENSGT00730000111174 ENSGT00940000158886.b.a ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 Goode s thornscrub tortoise MODERN SPECIES 16 TOMM40L (ENSGEVG00005014591) NR1I3 (ENSGEVG00005014694) PCP4L1 (ENSGEVG00005015103) ENSGEVG00005015139 ENSGEVG00005015164 ENSGEVG00005015190 SDHC (ENSGEVG00005015223) ENSGEVG00005015243 ENSGEVG00005015270 SLAMF8 (ENSGEVG00005015293) VSIG8 (ENSGEVG00005015351) CFAP45 (ENSGEVG00005015397) ENSGEVG00005015412 ENSGEVG00005015441 DUSP23 (ENSGEVG00005015740) ENSGEVG00005015767 ##22 ENSGEVG00005015803 ##22 ENSGEVG00005015829 ##22 ENSGEVG00005015841 ##22 ACKR1 (ENSGEVG00005015852) CADM3 (ENSGEVG00005015872) ENSGEVG00005015983 Abingdon island giant tortoise MODERN SPECIES 675 SLAMF8 (ENSCABG00000019063) VSIG8 (ENSCABG00000019068) CFAP45 (ENSCABG00000019070) ENSCABG00000019072 IGSF9 (ENSCABG00000019079) ENSCABG00000019084 ENSCABG00000019086 ##22 ENSCABG00000019087 ##22 ENSCABG00000019088 ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.e.a ##22 tuatara MODERN SPECIES 782 ENSSPUG00000007846 ENSSPUG00000007850 ENSSPUG00000007860 YIF1A (ENSSPUG00000007921) CNIH2 (ENSSPUG00000007933) RAB1B (ENSSPUG00000007945) KLC2 (ENSSPUG00000007960) ENSSPUG00000008036 ENSSPUG00000008048 ENSSPUG00000008060 NDUFS2 (ENSSPUG00000008068) ENSSPUG00000008076 CFAP45 (ENSSPUG00000008086) TAGLN2 (ENSSPUG00000008107) DUSP23 (ENSSPUG00000008113) ENSSPUG00000008124 ##22 ENSSPUG00000008132 ##22 ACKR1 (ENSSPUG00000008136) CADM3 (ENSSPUG00000008141) ENSSPUG00000008146 ENSSPUG00000008149 OR6N2 (ENSSPUG00000008153) OR6N1 (ENSSPUG00000008159) ENSSPUG00000008164 ENSSPUG00000008177 ATL3 (ENSSPUG00000008184) ENSSPUG00000008191 ZFTA (ENSSPUG00000008202) ENSSPUG00000008216 MARK2 (ENSSPUG00000008222) RCOR2 (ENSSPUG00000008241) Sauria DUPLICATION Sauria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 Archelosauria ANCESTRAL SPECIES 39 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00530000064299 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000003306 Cryptodira ANCESTRAL SPECIES 20 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000165064 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00940000167575 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a.d ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 ENSGT00530000064299 Emydidae ANCESTRAL SPECIES 18 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329.e ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263573.b.b.ub ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 ENSGT00990000212918 Three-toed box turtle MODERN SPECIES 119 ENSTMTG00000006188 CADM3 (ENSTMTG00000006148) ACKR1 (ENSTMTG00000006123) ENSTMTG00000006107 ##22 ENSTMTG00000006098 ##22 ENSTMTG00000006090 ##22 ENSTMTG00000006077 IGSF9 (ENSTMTG00000006012) TAGLN2 (ENSTMTG00000005994) CFAP45 (ENSTMTG00000005975) VSIG8 (ENSTMTG00000005958) SLAMF8 (ENSTMTG00000005935) ENSTMTG00000005926 ENSTMTG00000005912 ENSTMTG00000005886 SDHC (ENSTMTG00000005860) MPZ (ENSTMTG00000005830) ENSTMTG00000005816 ENSTMTG00000005800 painted turtle MODERN SPECIES 1639 ENSCPBG00000008251 ##22 ENSCPBG00000008244 ##22 Testudinidae ANCESTRAL SPECIES 62 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000165064 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566.c ENSGT00960000193142 ENSGT00940000168190 Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005015983 CADM3 (ENSGEVG00005015872) ACKR1 (ENSGEVG00005015852) ENSGEVG00005015841 ##22 ENSGEVG00005015829 ##22 ENSGEVG00005015803 ##22 ENSGEVG00005015767 ##22 DUSP23 (ENSGEVG00005015740) ENSGEVG00005015441 ENSGEVG00005015412 CFAP45 (ENSGEVG00005015397) VSIG8 (ENSGEVG00005015351) SLAMF8 (ENSGEVG00005015293) ENSGEVG00005015270 ENSGEVG00005015243 SDHC (ENSGEVG00005015223) ENSGEVG00005015190 ENSGEVG00005015164 ENSGEVG00005015139 PCP4L1 (ENSGEVG00005015103) Abingdon island giant tortoise MODERN SPECIES 675 ENSCABG00000019088 ##22 ENSCABG00000019087 ##22 ENSCABG00000019086 ##22 ENSCABG00000019084 IGSF9 (ENSCABG00000019079) ENSCABG00000019072 CFAP45 (ENSCABG00000019070) VSIG8 (ENSCABG00000019068) SLAMF8 (ENSCABG00000019063) Archosauria ANCESTRAL SPECIES 49 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 Aves ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 Neognathae ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 Neognathae_b ANCESTRAL SPECIES 34 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 Passeriformes ANCESTRAL SPECIES 76 ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 Great tit MODERN SPECIES 288 GLMP (ENSPMJG00000002554) CADM3 (ENSPMJG00000002571) ACKR1 (ENSPMJG00000002586) ENSPMJG00000002602 ##22 ENSPMJG00000002605 ##22 DUSP23 (ENSPMJG00000002610) IGSF9 (ENSPMJG00000002616) TAGLN2 (ENSPMJG00000002669) ENSPMJG00000002675 Passeriformes_d ANCESTRAL SPECIES 26 ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174.a ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q Flycatcher MODERN SPECIES 17 ENSFALG00000025768 ASH1L (ENSFALG00000002841) DAP3 (ENSFALG00000002836) MSTO1 (ENSFALG00000024576) ENSFALG00000024476 ENSFALG00000027616 ENSFALG00000002782 SYT11 (ENSFALG00000002759) RIT1 (ENSFALG00000002755) KHDC4 (ENSFALG00000002741) HORMAD1 (ENSFALG00000002732) ENSFALG00000024266 ENSA (ENSFALG00000026615) ENSFALG00000004236 ENSFALG00000004241 ENSFALG00000026572 ##22 IGSF9 (ENSFALG00000004259) ENSFALG00000004267 ENSFALG00000004275 ENSFALG00000025806 ENSFALG00000023822 ENSFALG00000007154 ENSFALG00000028366 ENSFALG00000014838 ENSFALG00000026595 ENSFALG00000024380 ENSFALG00000006197 ENSFALG00000027441 SELENBP1 (ENSFALG00000026596) ENSFALG00000010929 ENSFALG00000028940 Passeriformes_g ANCESTRAL SPECIES 27 ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099.k Passeroidea ANCESTRAL SPECIES 28 ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099.k Common canary MODERN SPECIES 480 ENSSCAG00000001100 ##22 ENSSCAG00000001125 ##22 Medium ground finch MODERN SPECIES 412 CADM3 (ENSGFOG00000006385) ENSGFOG00000006382 ##22 ENSGFOG00000006372 ##22 TAGLN2 (ENSGFOG00000006360) SNX27 (ENSGFOG00000006292) ENSGFOG00000006280 Neognathae_c ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 Golden eagle MODERN SPECIES 25 KIFC3 (ENSACCG00020008420) ENSACCG00020008472 ZNF319 (ENSACCG00020008514) USB1 (ENSACCG00020008523) MMP15 (ENSACCG00020008587) CFAP20 (ENSACCG00020008619) CSNK2A2 (ENSACCG00020008639) CCDC113 (ENSACCG00020008655) PRSS54 (ENSACCG00020008692) GINS3 (ENSACCG00020008729) ENSACCG00020008736 NDRG4 (ENSACCG00020008758) CADM3 (ENSACCG00020008795) ACKR1 (ENSACCG00020008822) ENSACCG00020008829 ##22 ENSACCG00020008842 ##22 DUSP23 (ENSACCG00020008861) IGSF9 (ENSACCG00020008895) TAGLN2 (ENSACCG00020008932) CFAP45 (ENSACCG00020008956) VSIG8 (ENSACCG00020008984) CFAP126 (ENSACCG00020009001) SDHC (ENSACCG00020009014) MPZ (ENSACCG00020009026) ENSACCG00020009037 NR1I3 (ENSACCG00020009047) TOMM40L (ENSACCG00020009074) ENSACCG00020009087 UFC1 (ENSACCG00020009099) USP21 (ENSACCG00020009111) PPOX (ENSACCG00020009141) Galloanserae ANCESTRAL SPECIES 31 ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000156893 ENSGT00940000164936 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Phasianidae ANCESTRAL SPECIES 32 ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Phasianidae_b ANCESTRAL SPECIES 31 ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Chicken MODERN SPECIES 17 MCL1 (ENSGALG00010028459) ENSGALG00010028461 ENSGALG00010028464 RPRD2 (ENSGALG00010028472) PRPF3 (ENSGALG00010028606) MRPS21 (ENSGALG00010028609) ENSGALG00010028611 ENSGALG00010028613 ENSGALG00010028619 APH1A (ENSGALG00010028642) ENSGALG00010028649 FCRL4 (ENSGALG00010028662) CADM3 (ENSGALG00010028671) ENSGALG00010028678 CRPL1 (ENSGALG00010028874) ##22 CRPL2 (ENSGALG00010028683) ##22 DUSP23 (ENSGALG00010028875) IGSF9 (ENSGALG00010028878) TAGLN2 (ENSGALG00010028686) CFAP45 (ENSGALG00010028689) VSIG8 (ENSGALG00010028695) CFAP126 (ENSGALG00010027446) ENSGALG00010027471 MPZ (ENSGALG00010027487) PCP4L1 (ENSGALG00010027492) NR1I3 (ENSGALG00010027496) TOMM40L (ENSGALG00010027524) ENSGALG00010027528 UFC1 (ENSGALG00010027531) USP21 (ENSGALG00010027536) PPOX (ENSGALG00010027540) Turkey MODERN SPECIES 19 ENSA (ENSMGAG00000000738) MCL1 (ENSMGAG00000000736) ECM1 (ENSMGAG00000020763) RPRD2 (ENSMGAG00000000731) PRPF3 (ENSMGAG00000000707) ENSMGAG00000000705 ENSMGAG00000000676 ENSMGAG00000000694 ENSMGAG00000000683 ENSMGAG00000022435 ENSMGAG00000018115 ENSMGAG00000000678 ENSMGAG00000018241 ENSMGAG00000017577 ENSMGAG00000018652 ##22 ENSMGAG00000019667 ##22 ENSMGAG00000021595 ENSMGAG00000000670 ENSMGAG00000020754 ENSMGAG00000001197 ENSMGAG00000001195 ENSMGAG00000021841 ENSMGAG00000018343 ENSMGAG00000017388 ENSMGAG00000017720 ENSMGAG00000021348 ENSMGAG00000022903 ENSMGAG00000018866 ENSMGAG00000001206 ENSMGAG00000018534 ENSMGAG00000019611 Anatidae ANCESTRAL SPECIES 126 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 Duck MODERN SPECIES 17 GOLPH3L (ENSAPLG00000009987) ENSA (ENSAPLG00000010036) ENSAPLG00000021823 ENSAPLG00000002706 PRPF3 (ENSAPLG00000002440) ETV3 (ENSAPLG00000023696) ENSAPLG00000019128 OTUD7B (ENSAPLG00000004627) VPS45 (ENSAPLG00000002351) PLEKHO1 (ENSAPLG00000002526) ANP32E (ENSAPLG00000002620) ENSAPLG00000020034 CADM3 (ENSAPLG00000017996) ACKR1 (ENSAPLG00000025585) ENSAPLG00000001080 ##22 ENSAPLG00000017213 ##22 DUSP23 (ENSAPLG00000005043) IGSF9 (ENSAPLG00000027030) PIP5K1A (ENSAPLG00000015266) TMEM79 (ENSAPLG00000028836) CCT3 (ENSAPLG00000009108) SSR2 (ENSAPLG00000012456) CTSS (ENSAPLG00000012624) CTSK (ENSAPLG00000012768) ARNT (ENSAPLG00000013397) SETDB1 (ENSAPLG00000013908) ENSAPLG00000014024 CERS2 (ENSAPLG00000014026) PRUNE1 (ENSAPLG00000014429) CDC42SE1 (ENSAPLG00000014686) GABPB2 (ENSAPLG00000014691) African ostrich MODERN SPECIES 155 ENSSCUG00000003247 ENSSCUG00000003245 CADM3 (ENSSCUG00000003242) ENSSCUG00000003239 ENSSCUG00000003237 ##22 ENSSCUG00000003236 ##22 IGSF9 (ENSSCUG00000003233) Sauria ANCESTRAL SPECIES 66 ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT01030000234540.C ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00530000064299 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Archelosauria ANCESTRAL SPECIES 39 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00530000064299 ENSGT00940000160641 ENSGT00390000003308.b Cryptodira ANCESTRAL SPECIES 20 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000165064 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00940000167575 ENSGT00390000000566 ENSGT01030000234556.a.b.b Testudinoidea ANCESTRAL SPECIES 17 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.A.a.a.d ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT00940000168190 Testudinidae ANCESTRAL SPECIES 62 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.e.a.b ##22 ENSGT00940000161329 ENSGT00940000165064 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886.b.a ENSGT00730000111174 ENSGT00940000161712 ENSGT01030000234540.C ENSGT01100000263573.b.b.tb ENSGT00390000001092 ENSGT00390000000566.c ENSGT00960000193142 Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005015983 CADM3 (ENSGEVG00005015872) ACKR1 (ENSGEVG00005015852) ENSGEVG00005015841 ##22 ENSGEVG00005015829 ##22 ENSGEVG00005015803 ##22 ENSGEVG00005015767 ##22 DUSP23 (ENSGEVG00005015740) ENSGEVG00005015441 ENSGEVG00005015412 CFAP45 (ENSGEVG00005015397) VSIG8 (ENSGEVG00005015351) SLAMF8 (ENSGEVG00005015293) ENSGEVG00005015270 ENSGEVG00005015243 SDHC (ENSGEVG00005015223) ENSGEVG00005015190 ENSGEVG00005015164 ENSGEVG00005015139 Abingdon island giant tortoise MODERN SPECIES 31 ENSCABG00000015975 ENSCABG00000015974 ENSCABG00000015971 ENSCABG00000015970 ENSCABG00000015969 ENPEP (ENSCABG00000015864) ENSCABG00000015862 ENSCABG00000015861 ##22 Chinese turtle MODERN SPECIES 480 ENSPSIG00000004342 ENSPSIG00000004379 ENSPSIG00000004476 ENSPSIG00000000700 CADM3 (ENSPSIG00000004672) ACKR1 (ENSPSIG00000004986) ENSPSIG00000004994 ##22 DUSP23 (ENSPSIG00000005037) ENSPSIG00000005063 ##22 ENSPSIG00000005075 ##22 ENSPSIG00000005361 ##22 ENSPSIG00000005410 ##22 ENSPSIG00000000706 ##22 ENSPSIG00000005425 ##22 IGSF9 (ENSPSIG00000005466) TAGLN2 (ENSPSIG00000006612) CFAP45 (ENSPSIG00000006632) VSIG8 (ENSPSIG00000007709) SLAMF8 (ENSPSIG00000007715) ENSPSIG00000000721 CFAP126 (ENSPSIG00000004382) SDHC (ENSPSIG00000004408) Archosauria ANCESTRAL SPECIES 49 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Aves ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Neognathae ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Galloanserae ANCESTRAL SPECIES 31 ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000156893 ENSGT00940000164936 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a Anatidae ANCESTRAL SPECIES 126 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 Duck MODERN SPECIES 17 HORMAD1 (ENSAPLG00000009738) GOLPH3L (ENSAPLG00000009987) ENSA (ENSAPLG00000010036) ENSAPLG00000021823 ENSAPLG00000002706 PRPF3 (ENSAPLG00000002440) ETV3 (ENSAPLG00000023696) ENSAPLG00000019128 OTUD7B (ENSAPLG00000004627) VPS45 (ENSAPLG00000002351) PLEKHO1 (ENSAPLG00000002526) ANP32E (ENSAPLG00000002620) ENSAPLG00000020034 CADM3 (ENSAPLG00000017996) ACKR1 (ENSAPLG00000025585) ENSAPLG00000001080 ##22 ENSAPLG00000017213 ##22 DUSP23 (ENSAPLG00000005043) IGSF9 (ENSAPLG00000027030) PIP5K1A (ENSAPLG00000015266) TMEM79 (ENSAPLG00000028836) CCT3 (ENSAPLG00000009108) SSR2 (ENSAPLG00000012456) CTSS (ENSAPLG00000012624) CTSK (ENSAPLG00000012768) ARNT (ENSAPLG00000013397) SETDB1 (ENSAPLG00000013908) ENSAPLG00000014024 CERS2 (ENSAPLG00000014026) PRUNE1 (ENSAPLG00000014429) CDC42SE1 (ENSAPLG00000014686) Pink-footed goose MODERN SPECIES 481 ENSABRG00000017642 CADM3 (ENSABRG00000017610) ACKR1 (ENSABRG00000017598) ENSABRG00000017596 ##22 DUSP23 (ENSABRG00000017592) IGSF9 (ENSABRG00000017588) Phasianidae ANCESTRAL SPECIES 32 ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a Phasianidae_b ANCESTRAL SPECIES 31 ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 ENSGT00940000159348.e ENSGT00950000183094.a ENSGT00390000011497 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT01000000215168 ENSGT01050000244808.D.fb.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT01070000256568 ENSGT00390000008196 ENSGT00940000155545.a Chicken MODERN SPECIES 17 ENSA (ENSGALG00010028455) MCL1 (ENSGALG00010028459) ENSGALG00010028461 ENSGALG00010028464 RPRD2 (ENSGALG00010028472) PRPF3 (ENSGALG00010028606) MRPS21 (ENSGALG00010028609) ENSGALG00010028611 ENSGALG00010028613 ENSGALG00010028619 APH1A (ENSGALG00010028642) ENSGALG00010028649 FCRL4 (ENSGALG00010028662) CADM3 (ENSGALG00010028671) ENSGALG00010028678 CRPL1 (ENSGALG00010028874) ##22 CRPL2 (ENSGALG00010028683) ##22 DUSP23 (ENSGALG00010028875) IGSF9 (ENSGALG00010028878) TAGLN2 (ENSGALG00010028686) CFAP45 (ENSGALG00010028689) VSIG8 (ENSGALG00010028695) CFAP126 (ENSGALG00010027446) ENSGALG00010027471 MPZ (ENSGALG00010027487) PCP4L1 (ENSGALG00010027492) NR1I3 (ENSGALG00010027496) TOMM40L (ENSGALG00010027524) ENSGALG00010027528 UFC1 (ENSGALG00010027531) USP21 (ENSGALG00010027536) Turkey MODERN SPECIES 19 GOLPH3L (ENSMGAG00000000741) ENSA (ENSMGAG00000000738) MCL1 (ENSMGAG00000000736) ECM1 (ENSMGAG00000020763) RPRD2 (ENSMGAG00000000731) PRPF3 (ENSMGAG00000000707) ENSMGAG00000000705 ENSMGAG00000000676 ENSMGAG00000000694 ENSMGAG00000000683 ENSMGAG00000022435 ENSMGAG00000018115 ENSMGAG00000000678 ENSMGAG00000018241 ENSMGAG00000017577 ENSMGAG00000018652 ##22 ENSMGAG00000019667 ##22 ENSMGAG00000021595 ENSMGAG00000000670 ENSMGAG00000020754 ENSMGAG00000001197 ENSMGAG00000001195 ENSMGAG00000021841 ENSMGAG00000018343 ENSMGAG00000017388 ENSMGAG00000017720 ENSMGAG00000021348 ENSMGAG00000022903 ENSMGAG00000018866 ENSMGAG00000001206 ENSMGAG00000018534 Japanese quail MODERN SPECIES 17 ENSA (ENSCJPG00005015088) MCL1 (ENSCJPG00005015089) ENSCJPG00005015090 ENSCJPG00005015091 RPRD2 (ENSCJPG00005015092) PRPF3 (ENSCJPG00005015093) ENSCJPG00005015156 ENSCJPG00005015157 CA14 (ENSCJPG00005015159) APH1A (ENSCJPG00005015160) ENSCJPG00005015161 ENSCJPG00005015169 ENSCJPG00005015172 CADM3 (ENSCJPG00005015173) ACKR1 (ENSCJPG00005015175) ENSCJPG00005015177 ##22 DUSP23 (ENSCJPG00005015178) IGSF9 (ENSCJPG00005015180) TAGLN2 (ENSCJPG00005015182) CFAP45 (ENSCJPG00005015183) VSIG8 (ENSCJPG00005015184) ENSCJPG00005015185 SSR2 (ENSCJPG00005015186) CTSS (ENSCJPG00005015187) ARNT (ENSCJPG00005015188) ENSCJPG00005015249 ENSCJPG00005015251 ENSCJPG00005015255 SETDB1 (ENSCJPG00005015256) CERS2 (ENSCJPG00005015257) MINDY1 (ENSCJPG00005015258) Neognathae_b ANCESTRAL SPECIES 34 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Passeriformes ANCESTRAL SPECIES 76 ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 Passeriformes_d ANCESTRAL SPECIES 26 ENSGT00900000141033.b.b ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174.a ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 Passeriformes_g ANCESTRAL SPECIES 27 ENSGT00900000141033.b.b ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q Passeroidea ANCESTRAL SPECIES 28 ENSGT00900000141033.b.b ENSGT00940000156698 ENSGT00390000015248 ENSGT00530000064067 ENSGT00390000016256 ENSGT00940000159088 ENSGT00940000160132 ENSGT00510000047412.a ENSGT00390000018130.a.a.a ENSGT00390000007153.a.b ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000005131 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q Zebra finch MODERN SPECIES 18 ASH1L (ENSTGUG00000017419) DAP3 (ENSTGUG00000017418) MSTO1 (ENSTGUG00000017416) ENSTGUG00000017414 ENSTGUG00000019175 SYT11 (ENSTGUG00000017412) RIT1 (ENSTGUG00000023363) KHDC4 (ENSTGUG00000017408) HORMAD1 (ENSTGUG00000017407) GOLPH3L (ENSTGUG00000017405) ENSA (ENSTGUG00000022038) MCL1 (ENSTGUG00000022286) GLMP (ENSTGUG00000019667) CADM3 (ENSTGUG00000021756) ACKR1 (ENSTGUG00000025315) ENSTGUG00000016438 ##22 DUSP23 (ENSTGUG00000016440) ENSTGUG00000020691 IGSF9 (ENSTGUG00000026729) TAGLN2 (ENSTGUG00000027715) PEX19 (ENSTGUG00000029746) ENSTGUG00000027613 PEA15 (ENSTGUG00000028006) ATP1A2 (ENSTGUG00000027873) KCNJ9 (ENSTGUG00000000586) KCNJ10 (ENSTGUG00000020285) F11R (ENSTGUG00000019634) USF1 (ENSTGUG00000019311) ARHGAP30 (ENSTGUG00000023219) ENSTGUG00000028866 ENSTGUG00000027626 Common canary MODERN SPECIES 480 ENSSCAG00000001100 ##22 ENSSCAG00000001125 ##22 Medium ground finch MODERN SPECIES 412 CADM3 (ENSGFOG00000006385) ENSGFOG00000006382 ##22 ENSGFOG00000006372 ##22 TAGLN2 (ENSGFOG00000006360) SNX27 (ENSGFOG00000006292) ENSGFOG00000006280 Great tit MODERN SPECIES 288 GLMP (ENSPMJG00000002554) CADM3 (ENSPMJG00000002571) ACKR1 (ENSPMJG00000002586) ENSPMJG00000002602 ##22 ENSPMJG00000002605 ##22 DUSP23 (ENSPMJG00000002610) IGSF9 (ENSPMJG00000002616) TAGLN2 (ENSPMJG00000002669) ENSPMJG00000002675 Neognathae_c ANCESTRAL SPECIES 36 ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.a ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712 ENSGT00390000001092 ENSGT00390000000566 ENSGT01030000234556.a.b.b ENSGT01050000245958 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 Golden eagle MODERN SPECIES 25 KATNB1 (ENSACCG00020008397) KIFC3 (ENSACCG00020008420) ENSACCG00020008472 ZNF319 (ENSACCG00020008514) USB1 (ENSACCG00020008523) MMP15 (ENSACCG00020008587) CFAP20 (ENSACCG00020008619) CSNK2A2 (ENSACCG00020008639) CCDC113 (ENSACCG00020008655) PRSS54 (ENSACCG00020008692) GINS3 (ENSACCG00020008729) ENSACCG00020008736 NDRG4 (ENSACCG00020008758) CADM3 (ENSACCG00020008795) ACKR1 (ENSACCG00020008822) ENSACCG00020008829 ##22 ENSACCG00020008842 ##22 DUSP23 (ENSACCG00020008861) IGSF9 (ENSACCG00020008895) TAGLN2 (ENSACCG00020008932) CFAP45 (ENSACCG00020008956) VSIG8 (ENSACCG00020008984) CFAP126 (ENSACCG00020009001) SDHC (ENSACCG00020009014) MPZ (ENSACCG00020009026) ENSACCG00020009037 NR1I3 (ENSACCG00020009047) TOMM40L (ENSACCG00020009074) ENSACCG00020009087 UFC1 (ENSACCG00020009099) USP21 (ENSACCG00020009111) African ostrich MODERN SPECIES 155 ENSSCUG00000003247 ENSSCUG00000003245 CADM3 (ENSSCUG00000003242) ENSSCUG00000003239 ENSSCUG00000003237 ##22 ENSSCUG00000003236 ##22 IGSF9 (ENSSCUG00000003233) Lepidosauria ANCESTRAL SPECIES 47 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a ENSGT00940000162660.b.e.b.a ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT01030000234540.C Episquamata ANCESTRAL SPECIES 19 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00940000169892 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712.b ENSGT00940000161712.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00940000157743 ENSGT00940000154524.a ENSGT00940000159147 ENSGT00940000162438 ENSGT00390000016784 ENSGT00940000161776 ENSGT00940000155070 Laterata ANCESTRAL SPECIES 25 ENSGT00390000006979.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.b.a.b ENSGT00940000158895.c.b ENSGT00940000158895.c.a ENSGT00940000159779 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712.b ENSGT00940000161712.a ENSGT01030000234540.C ENSGT01100000263573.b.b ENSGT00940000157743 ENSGT00940000154524.a ENSGT00940000159147 Common wall lizard MODERN SPECIES 7 ENSPMRG00000018064 NAA40 (ENSPMRG00000018070) RCOR2 (ENSPMRG00000018078) MARK2 (ENSPMRG00000018128) ENSPMRG00000018257 ENSPMRG00000018261 ZFTA (ENSPMRG00000018267) ENSPMRG00000018274 ATL3 (ENSPMRG00000018282) ENSPMRG00000018293 ENSPMRG00000018306 OR6N1 (ENSPMRG00000018321) OR6N2 (ENSPMRG00000018328) CADM3 (ENSPMRG00000018343) ACKR1 (ENSPMRG00000018360) ENSPMRG00000018368 ##22 ENSPMRG00000018370 ##22 ENSPMRG00000018374 ##22 ENSPMRG00000018379 ##22 ENSPMRG00000018383 ##22 DUSP23 (ENSPMRG00000018389) ENSPMRG00000018394 IGSF9 (ENSPMRG00000018405) TAGLN2 (ENSPMRG00000018431) CFAP45 (ENSPMRG00000018455) ENSPMRG00000018482 ENSPMRG00000014961 ENSPMRG00000014969 SYVN1 (ENSPMRG00000014978) SPDYC (ENSPMRG00000015019) ENSPMRG00000015024 Argentine black and white tegu MODERN SPECIES 467 ENSSMRG00000002126 ##22 tuatara MODERN SPECIES 782 NAA40 (ENSSPUG00000008279) RCOR2 (ENSSPUG00000008241) MARK2 (ENSSPUG00000008222) ENSSPUG00000008216 ZFTA (ENSSPUG00000008202) ENSSPUG00000008191 ATL3 (ENSSPUG00000008184) ENSSPUG00000008177 ENSSPUG00000008164 OR6N1 (ENSSPUG00000008159) OR6N2 (ENSSPUG00000008153) ENSSPUG00000008149 ENSSPUG00000008146 CADM3 (ENSSPUG00000008141) ACKR1 (ENSSPUG00000008136) ENSSPUG00000008132 ##22 ENSSPUG00000008124 ##22 DUSP23 (ENSSPUG00000008113) TAGLN2 (ENSSPUG00000008107) CFAP45 (ENSSPUG00000008086) ENSSPUG00000008076 NDUFS2 (ENSSPUG00000008068) ENSSPUG00000008060 ENSSPUG00000008048 ENSSPUG00000008036 KLC2 (ENSSPUG00000007960) RAB1B (ENSSPUG00000007945) CNIH2 (ENSSPUG00000007933) YIF1A (ENSSPUG00000007921) ENSSPUG00000007860 ENSSPUG00000007850 Sauria ANCESTRAL SPECIES 243 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f ##22 Lepidosauria ANCESTRAL SPECIES 223 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 Episquamata ANCESTRAL SPECIES 79 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 Laterata ANCESTRAL SPECIES 25 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.b ##22 ENSGT01100000263515.a.b.a.b.b.h.e.b.b ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000158895.c.a ENSGT00940000158895.c.b ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 80 MINDY1 (ENSSMRG00000021229) PRUNE1 (ENSSMRG00000021226) BNIPL (ENSSMRG00000021224) CDC42SE1 (ENSSMRG00000021222) ENSSMRG00000021221 GABPB2 (ENSSMRG00000021219) ENSSMRG00000021217 SEMA6C (ENSSMRG00000021205) ENSSMRG00000021202 ENSSMRG00000021199 ENSSMRG00000021197 CFAP45 (ENSSMRG00000021196) TAGLN2 (ENSSMRG00000021195) IGSF9 (ENSSMRG00000021194) DUSP23 (ENSSMRG00000021193) ENSSMRG00000021192 ##22 ENSSMRG00000021191 ##22 ENSSMRG00000021190 ##22 ENSSMRG00000021188 CAPN1 (ENSSMRG00000021187) SPDYC (ENSSMRG00000021186) SYVN1 (ENSSMRG00000021185) ENSSMRG00000021184 EHBP1L1 (ENSSMRG00000021183) ENSSMRG00000021182 MAP3K11 (ENSSMRG00000021181) PCNX3 (ENSSMRG00000021180) SIPA1 (ENSSMRG00000021179) LTBP3 (ENSSMRG00000021178) MEN1 (ENSSMRG00000021177) EHD1 (ENSSMRG00000021176) Argentine black and white tegu MODERN SPECIES 78 ENSSMRG00000010215 NAA40 (ENSSMRG00000010214) RCOR2 (ENSSMRG00000010132) MARK2 (ENSSMRG00000010124) ENSSMRG00000010122 ENSSMRG00000010121 ZFTA (ENSSMRG00000010120) ENSSMRG00000010119 ATL3 (ENSSMRG00000010118) ENSSMRG00000010117 ENSSMRG00000010115 ENSSMRG00000010113 OR6N2 (ENSSMRG00000010112) CADM3 (ENSSMRG00000010111) ENSSMRG00000010110 ENSSMRG00000010109 ##22 ENSSMRG00000010108 TNFAIP8L2 (ENSSMRG00000010107) LYSMD1 (ENSSMRG00000010106) SCNM1 (ENSSMRG00000010104) TMOD4 (ENSSMRG00000010101) VPS72 (ENSSMRG00000010100) PIP5K1A (ENSSMRG00000010099) PSMD4 (ENSSMRG00000010098) ZNF687 (ENSSMRG00000010095) ENSSMRG00000010092 PI4KB (ENSSMRG00000010084) ADAMTSL4 (ENSSMRG00000010079) ECM1 (ENSSMRG00000010077) ENSSMRG00000008037 RPRD2 (ENSSMRG00000008019) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000162660.b.e.a ENSGT00940000154853 ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 ENSGT00950000185472 ENSGT00940000166053 ENSGT00940000155031 Lizard MODERN SPECIES 997 LEF1 (ENSACAG00000008050) HADH (ENSACAG00000042868) CYP2U1 (ENSACAG00000008194) SGMS2 (ENSACAG00000008243) ENSACAG00000040110 PAPSS1 (ENSACAG00000008271) ENSACAG00000008330 ENSACAG00000035526 ##22 GIMD1 (ENSACAG00000021108) ENSACAG00000000310 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.f.c.a.a ##22 Indian cobra MODERN SPECIES 16 BICDL1 (ENSNNAG00000018561) CIT (ENSNNAG00000018266) PRKAB1 (ENSNNAG00000018182) TBC1D10A (ENSNNAG00000018169) ENSNNAG00000018160 LIF (ENSNNAG00000018156) HORMAD2 (ENSNNAG00000018142) ENSNNAG00000018103 MTMR3 (ENSNNAG00000017574) ASCC2 (ENSNNAG00000017131) ENSNNAG00000017100 ZMAT5 (ENSNNAG00000017096) CABP7 (ENSNNAG00000017091) CIDEC (ENSNNAG00000017088) NF2 (ENSNNAG00000017065) ENSNNAG00000017052 ##22 ENSNNAG00000017040 GAS2L1 (ENSNNAG00000017033) EWSR1 (ENSNNAG00000016983) RHBDD3 (ENSNNAG00000016971) SF3A1 (ENSNNAG00000016911) ENSNNAG00000016895 RNF215 (ENSNNAG00000016873) ENSNNAG00000016863 SEC14L2 (ENSNNAG00000016858) MTFP1 (ENSNNAG00000016849) GAL3ST1 (ENSNNAG00000016837) PES1 (ENSNNAG00000016723) TCN2 (ENSNNAG00000016711) SLC35E4 (ENSNNAG00000016708) ENSNNAG00000016687 Elapidae_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.f.c.a.a ##22 Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000008694 ##22 POLA2 (ENSLLTG00000008720) CDC42EP2 (ENSLLTG00000008755) DPF2 (ENSLLTG00000008775) ENSLLTG00000008818 ENSLLTG00000009064 ENSLLTG00000009509 Elapidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 Elapidae_a ANCESTRAL SPECIES 43 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT00940000169892 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT00940000161712.b ENSGT00940000161712.a ENSGT01030000234540.C ENSGT00940000157743 ENSGT00940000154524.a ENSGT00940000159147 ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00390000016784.l ENSGT00940000161776 ENSGT00940000155070 ENSGT00940000154901.C.b.f.b.a.b ENSGT00940000154901.C.b.f.b.b.b ENSGT00940000154901.C.b.f.b.b.a.b.b ENSGT00940000154901.C.b.f.b.b.a.b.a ENSGT00940000154901.C.b.f.b.b.a.a ENSGT00940000154901.C.b.f.b.a.a ENSGT00940000161363 ENSGT00530000064721 ENSGT00940000166023 ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000011640 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000006372 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT00940000161329 ENSGT00940000160444 ENSGT00940000158886 ENSGT00730000111174 ENSGT01030000234540.C ENSGT00940000157743 ENSGT00940000154524.a ENSGT00940000159147 ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00390000016784.l ENSGT00940000161776 ENSGT00940000155070 ENSGT00940000154901.C.b.f.b.a.b ENSGT00940000154901.C.b.f.b.b.b ENSGT00940000154901.C.b.f.b.b.a.b.a ENSGT00940000154901.C.b.f.b.b.a.a ENSGT00940000154901.C.b.f.b.a.a ENSGT00940000161363 ENSGT00530000064721 ENSGT00940000166023 ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a Mainland tiger snake MODERN SPECIES 690 SLAMF8 (ENSNSUG00000016544) SYVN1 (ENSNSUG00000016542) SPDYC (ENSNSUG00000016541) CAPN1 (ENSNSUG00000016540) ENSNSUG00000016539 ##22 Eastern brown snake MODERN SPECIES 85 OR6K3 (ENSPTXG00000010082) CADM3 (ENSPTXG00000010083) ENSPTXG00000010085 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010089 ##22 ENSPTXG00000010091 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010112 CFAP45 (ENSPTXG00000010113) SLAMF8 (ENSPTXG00000010114) SYVN1 (ENSPTXG00000010116) SPDYC (ENSPTXG00000010117) CAPN1 (ENSPTXG00000010118) ENSPTXG00000010119 ##22 CDC42EP2 (ENSPTXG00000010120) DPF2 (ENSPTXG00000010121) ENSPTXG00000010123 ENSPTXG00000010206 ENSPTXG00000010225 ENSPTXG00000010331 ENSPTXG00000010336 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010338 KAT5 (ENSPTXG00000010339) RELA (ENSPTXG00000010343) C11orf68 (ENSPTXG00000010863) DRAP1 (ENSPTXG00000010864) PELI3 (ENSPTXG00000010866) DPP3 (ENSPTXG00000010869) Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ENSLLTG00000015771 ENSLLTG00000003127 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 ##22 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000162660.b.e.b.b ENSGT00940000158566 ENSGT00940000157482 ENSGT00600000084617 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000154901.C.b.f.b.b.a.b.a ENSGT00940000154901.C.b.f.b.b.b ENSGT00940000154901.C.b.f.b.a.b ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a ##22 ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.g.a ##22 ENSGT00390000006372 ENSGT00940000159779 ENSGT00940000162973 ENSGT00940000158895.c.a ENSGT00940000162660.b.e.b.a.a ENSGT00940000162660.b.e.b.a.b ENSGT00940000154853 ENSGT00940000158566.m.b ENSGT00940000157482 ENSGT00600000084617 Mainland tiger snake MODERN SPECIES 602 CFAP45 (ENSNSUG00000002542) TAGLN2 (ENSNSUG00000002543) IGSF9 (ENSNSUG00000002544) DUSP23 (ENSNSUG00000002545) ENSNSUG00000002546 ##22 ENSNSUG00000002547 ##22 ENSNSUG00000002548 ##22 Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010331 ENSPTXG00000010225 ENSPTXG00000010206 ENSPTXG00000010123 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 ##22 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ##22 ENSPTXG00000010088 ##22 ENSPTXG00000010087 ##22 ENSPTXG00000010086 ##22 ENSPTXG00000010085 ##22 CADM3 (ENSPTXG00000010083) OR6K3 (ENSPTXG00000010082) ENSPTXG00000010080 ENSPTXG00000010079 ENSPTXG00000010078 ENSPTXG00000009909 ENSPTXG00000009908 ZFTA (ENSPTXG00000009907) ENSPTXG00000009906 ENSPTXG00000009905 MARK2 (ENSPTXG00000009903) Blue-lipped sea krait MODERN SPECIES 6732 DUSP23 (ENSLLTG00000010249) ENSLLTG00000010260 ##22 ENSLLTG00000010273 ##22 ENSLLTG00000010280 ##22 ENSLLTG00000010288 ##22 ENSLLTG00000010294 ##22 ENSLLTG00000010307 ##22 ENSLLTG00000010634 ##22 ENSLLTG00000010665 ENSLLTG00000010671 Indian cobra MODERN SPECIES 17 ENSNNAG00000005405 ENSNNAG00000005756 ENSNNAG00000006165 ENSNNAG00000006513 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ##22 ENSNNAG00000007266 ##22 ENSNNAG00000007287 ##22 ENSNNAG00000007337 ##22 ENSNNAG00000007363 ##22 CADM3 (ENSNNAG00000007377) OR6K2 (ENSNNAG00000007406) ENSNNAG00000007424 ENSNNAG00000007458 ENSNNAG00000007486 ENSNNAG00000007507 ATL3 (ENSNNAG00000007517) ENSNNAG00000007579 ZFTA (ENSNNAG00000007620) ENSNNAG00000007705 ENSNNAG00000007754 Elapidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.f.d ##22 Elapidae_a ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.h.f.d ##22 Blue-lipped sea krait MODERN SPECIES 5158 ENSLLTG00000009507 ##22 Actinopterygii ANCESTRAL SPECIES 199 ENSGT00940000158319 ENSGT00610000087444 ENSGT00940000157255 ENSGT01100000263515.a.b.a.b.b ##22 ENSGT00940000156836 ENSGT00390000011364 ENSGT00390000005194 ENSGT00390000009671 ENSGT00530000063687.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Reedfish MODERN SPECIES 9 ENSECRG00000018666 lamb2 (ENSECRG00000018473) trappc6b (ENSECRG00000018376) ENSECRG00000018350 USP19 (ENSECRG00000018313) ENSECRG00000018297 rps25 (ENSECRG00000018233) KLHDC8B (ENSECRG00000018202) ENSECRG00000018177 ENSECRG00000018150 CRP (ENSECRG00000018128) ##22 kbtbd12 (ENSECRG00000018104) MGLL (ENSECRG00000018082) xpc (ENSECRG00000018047) TMEM43 (ENSECRG00000018022) ENSECRG00000017997 IFT122 (ENSECRG00000017601) rho (ENSECRG00000017447) ENSECRG00000017422 PLXND1 (ENSECRG00000017364) tmcc1b (ENSECRG00000017338) ENSECRG00000017298 ENSECRG00000017126 GPX1 (ENSECRG00000016812) ENSECRG00000016756 emc3 (ENSECRG00000016728) Neopterygii ANCESTRAL SPECIES 75 ENSGT00390000009532.A.d.a ENSGT00940000156122 ENSGT00950000182939.b.a.b ENSGT00940000155197 ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00930000152681 ENSGT00940000160061 ENSGT01020000230394.e.a.a.a ENSGT00940000157810 ENSGT00940000158319 ENSGT00610000087444 ENSGT00940000157255 ENSGT01100000263515.a.b.a.b.b ##22 ENSGT00940000156836 ENSGT00390000011364 ENSGT00390000005194 ENSGT00390000009671 ENSGT00530000063687.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 671 HTD2 (ENSLOCG00000013205) pxk (ENSLOCG00000013200) pdhb (ENSLOCG00000013193) kctd6a (ENSLOCG00000013186) ccdc71 (ENSLOCG00000013182) ENSLOCG00000013171 ENSLOCG00000013159 lamb2 (ENSLOCG00000013129) trappc6b (ENSLOCG00000013125) USP19 (ENSLOCG00000013120) ENSLOCG00000013114 ENSLOCG00000013109 ENSLOCG00000013104 ENSLOCG00000013101 ENSLOCG00000013096 ENSLOCG00000013088 ##22 ENSLOCG00000013082 ##22 kbtbd12 (ENSLOCG00000013077) mgll (ENSLOCG00000013071) xpc (ENSLOCG00000013060) TMEM43 (ENSLOCG00000013056) ENSLOCG00000013054 IFT122 (ENSLOCG00000013048) exorh (ENSLOCG00000013037) PLXND1 (ENSLOCG00000013025) tmcc1b (ENSLOCG00000013017) AFAP1L2 (ENSLOCG00000013005) ablim1a (ENSLOCG00000012991) fhip2a (ENSLOCG00000012984) trub1 (ENSLOCG00000012979) ATRNL1 (ENSLOCG00000012964) Spotted gar MODERN SPECIES 671 pxk (ENSLOCG00000013200) pdhb (ENSLOCG00000013193) kctd6a (ENSLOCG00000013186) ccdc71 (ENSLOCG00000013182) ENSLOCG00000013171 ENSLOCG00000013159 lamb2 (ENSLOCG00000013129) trappc6b (ENSLOCG00000013125) USP19 (ENSLOCG00000013120) ENSLOCG00000013114 ENSLOCG00000013109 ENSLOCG00000013104 ENSLOCG00000013101 ENSLOCG00000013096 ENSLOCG00000013088 ##22 ENSLOCG00000013082 ##22 kbtbd12 (ENSLOCG00000013077) mgll (ENSLOCG00000013071) xpc (ENSLOCG00000013060) TMEM43 (ENSLOCG00000013056) ENSLOCG00000013054 IFT122 (ENSLOCG00000013048) exorh (ENSLOCG00000013037) PLXND1 (ENSLOCG00000013025) tmcc1b (ENSLOCG00000013017) AFAP1L2 (ENSLOCG00000013005) ablim1a (ENSLOCG00000012991) fhip2a (ENSLOCG00000012984) trub1 (ENSLOCG00000012979) ATRNL1 (ENSLOCG00000012964) gfra1b (ENSLOCG00000012958) Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a ##22 Clupeocephala ANCESTRAL SPECIES 138 ENSGT01100000263515.a.b.a.b.b.k.a ##22 ENSGT00940000157051 ENSGT00940000162185 ENSGT00940000162768.A ENSGT00720000108792.A ENSGT00940000175717 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00990000214327 ENSGT00940000161907 ENSGT00950000183132.B ENSGT00390000003094 ENSGT00950000183037.B.a ENSGT00950000182992.a.b.a.a ENSGT00940000157736 Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 Acanthomorphata ANCESTRAL SPECIES 9 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00990000204777 ENSGT01060000249136 ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00990000204777 ENSGT01060000249136 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00990000204777 ENSGT01060000249136 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 411 ENSHCOG00000007468 ENSHCOG00000007427 ENSHCOG00000007416 znf687a (ENSHCOG00000007407) psmd4b (ENSHCOG00000007395) ENSHCOG00000007372 ##22 ENSHCOG00000007368 ##22 ENSHCOG00000007363 ##22 ENSHCOG00000007359 ##22 ENSHCOG00000007353 ##22 pip5k1ab (ENSHCOG00000007342) ENSHCOG00000007295 ENSHCOG00000007287 ENSHCOG00000007274 them4 (ENSHCOG00000007244) ENSHCOG00000007231 ENSHCOG00000007214 ENSHCOG00000007206 nbn (ENSHCOG00000007189) OSGIN2 (ENSHCOG00000007165) gtpbp10 (ENSHCOG00000007155) ENSHCOG00000007150 cldn12 (ENSHCOG00000007136) ENSHCOG00000007121 slc25a40 (ENSHCOG00000007110) Tiger tail seahorse MODERN SPECIES 411 ENSHCOG00000007121 cldn12 (ENSHCOG00000007136) ENSHCOG00000007150 gtpbp10 (ENSHCOG00000007155) OSGIN2 (ENSHCOG00000007165) nbn (ENSHCOG00000007189) ENSHCOG00000007206 ENSHCOG00000007214 ENSHCOG00000007231 them4 (ENSHCOG00000007244) ENSHCOG00000007274 ENSHCOG00000007287 ENSHCOG00000007295 pip5k1ab (ENSHCOG00000007342) ENSHCOG00000007353 ##22 ENSHCOG00000007359 ##22 ENSHCOG00000007363 ##22 ENSHCOG00000007368 ##22 ENSHCOG00000007372 ##22 psmd4b (ENSHCOG00000007395) znf687a (ENSHCOG00000007407) ENSHCOG00000007416 ENSHCOG00000007427 ENSHCOG00000007468 Tiger tail seahorse MODERN SPECIES 411 ENSHCOG00000007150 gtpbp10 (ENSHCOG00000007155) OSGIN2 (ENSHCOG00000007165) nbn (ENSHCOG00000007189) ENSHCOG00000007206 ENSHCOG00000007214 ENSHCOG00000007231 them4 (ENSHCOG00000007244) ENSHCOG00000007274 ENSHCOG00000007287 ENSHCOG00000007295 pip5k1ab (ENSHCOG00000007342) ENSHCOG00000007353 ##22 ENSHCOG00000007359 ##22 ENSHCOG00000007363 ##22 ENSHCOG00000007368 ##22 ENSHCOG00000007372 ##22 psmd4b (ENSHCOG00000007395) znf687a (ENSHCOG00000007407) ENSHCOG00000007416 ENSHCOG00000007427 ENSHCOG00000007468 Tiger tail seahorse MODERN SPECIES 411 ENSHCOG00000007468 ENSHCOG00000007427 ENSHCOG00000007416 znf687a (ENSHCOG00000007407) psmd4b (ENSHCOG00000007395) ENSHCOG00000007372 ##22 ENSHCOG00000007368 ##22 ENSHCOG00000007363 ##22 ENSHCOG00000007359 ##22 ENSHCOG00000007353 ##22 pip5k1ab (ENSHCOG00000007342) ENSHCOG00000007295 ENSHCOG00000007287 ENSHCOG00000007274 them4 (ENSHCOG00000007244) ENSHCOG00000007231 ENSHCOG00000007214 ENSHCOG00000007206 nbn (ENSHCOG00000007189) OSGIN2 (ENSHCOG00000007165) gtpbp10 (ENSHCOG00000007155) ENSHCOG00000007150 cldn12 (ENSHCOG00000007136) Tiger tail seahorse MODERN SPECIES 411 ENSHCOG00000007468 ENSHCOG00000007427 ENSHCOG00000007416 znf687a (ENSHCOG00000007407) psmd4b (ENSHCOG00000007395) ENSHCOG00000007372 ##22 ENSHCOG00000007368 ##22 ENSHCOG00000007363 ##22 ENSHCOG00000007359 ##22 ENSHCOG00000007353 ##22 pip5k1ab (ENSHCOG00000007342) ENSHCOG00000007295 ENSHCOG00000007287 ENSHCOG00000007274 them4 (ENSHCOG00000007244) ENSHCOG00000007231 ENSHCOG00000007214 ENSHCOG00000007206 nbn (ENSHCOG00000007189) OSGIN2 (ENSHCOG00000007165) gtpbp10 (ENSHCOG00000007155) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00990000204777 ENSGT01060000249136 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT01010000230299 ENSGT00620000088774 ENSGT00990000204777 ENSGT00390000015721 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b Eupercaria ANCESTRAL SPECIES 1 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT01010000230299 ENSGT00620000088774 ENSGT00390000015721 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 Tetraodontidae ANCESTRAL SPECIES 14 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 ENSGT00940000159418 ENSGT01060000248556.C Tetraodon MODERN SPECIES 23 ENSTNIG00000018332 s100t (ENSTNIG00000001647) CHRNB2 (ENSTNIG00000018333) SHE (ENSTNIG00000018334) ENSTNIG00000018335 tuft1a (ENSTNIG00000018336) C1orf43 (ENSTNIG00000018337) ENSTNIG00000018338 aqp10a (ENSTNIG00000018339) ENSTNIG00000001192 aqp10a (ENSTNIG00000018340) ENSTNIG00000018341 ENSTNIG00000001801 znf687a (ENSTNIG00000018342) psmd4b (ENSTNIG00000018343) ENSTNIG00000018344 ##22 pip5k1ab (ENSTNIG00000018345) ENSTNIG00000018346 ENSTNIG00000018347 them4 (ENSTNIG00000018348) nbn (ENSTNIG00000018349) OSGIN2 (ENSTNIG00000018350) gtpbp10 (ENSTNIG00000018351) cldn12 (ENSTNIG00000018353) ADAM22 (ENSTNIG00000018352) ENSTNIG00000000239 slc25a40 (ENSTNIG00000018354) rundc3b (ENSTNIG00000018355) ENSTNIG00000018356 abcb4 (ENSTNIG00000018357) abcb4 (ENSTNIG00000018358) Fugu MODERN SPECIES 19 CHRNB2 (ENSTRUG00000005762) SHE (ENSTRUG00000005642) ENSTRUG00000005390 tuft1a (ENSTRUG00000024871) C1orf43 (ENSTRUG00000005154) ENSTRUG00000021748 aqp10a (ENSTRUG00000020692) ENSTRUG00000003201 ENSTRUG00000003146 ENSTRUG00000023419 ENSTRUG00000024281 ENSTRUG00000026520 znf687a (ENSTRUG00000003078) psmd4b (ENSTRUG00000002109) ENSTRUG00000029153 ENSTRUG00000022000 ##22 pip5k1ab (ENSTRUG00000003020) ENSTRUG00000025364 ENSTRUG00000001436 them4 (ENSTRUG00000002448) ENSTRUG00000002484 OSGIN2 (ENSTRUG00000003218) gtpbp10 (ENSTRUG00000021373) cldn12 (ENSTRUG00000023595) ADAM22 (ENSTRUG00000003940) ENSTRUG00000002513 slc25a40 (ENSTRUG00000005070) rundc3b (ENSTRUG00000005573) ENSTRUG00000027118 crot (ENSTRUG00000006780) acbd7 (ENSTRUG00000021934) Eupecaria_A ANCESTRAL SPECIES 2 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT01010000230299 ENSGT00620000088774 ENSGT00390000015721 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 Eupecaria_B ANCESTRAL SPECIES 4 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Perciformes ANCESTRAL SPECIES 3 ENSGT00940000154172.b ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000154172.b ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Pike perch MODERN SPECIES 15 pbxip1b (ENSSLUG00000011806) s100a11 (ENSSLUG00000011804) ENSSLUG00000011797 s100t (ENSSLUG00000011791) CHRNB2 (ENSSLUG00000011719) ENSSLUG00000011708 ENSSLUG00000011703 tuft1a (ENSSLUG00000011695) C1orf43 (ENSSLUG00000011690) ENSSLUG00000011674 ENSSLUG00000011293 ENSSLUG00000011209 ENSSLUG00000011193 znf687a (ENSSLUG00000011183) psmd4b (ENSSLUG00000011032) ENSSLUG00000011011 ##22 pip5k1ab (ENSSLUG00000010721) ENSSLUG00000010690 ENSSLUG00000010667 them4 (ENSSLUG00000010661) si:dkey-87o1.2 (ENSSLUG00000010660) zgc:174935 (ENSSLUG00000010656) ENSSLUG00000010654 nbn (ENSSLUG00000010647) OSGIN2 (ENSSLUG00000010633) gtpbp10 (ENSSLUG00000010420) cldn12 (ENSSLUG00000010400) ADAM22 (ENSSLUG00000004046) dbf4 (ENSSLUG00000003599) slc25a40 (ENSSLUG00000003570) rundc3b (ENSSLUG00000003548) Channel bull blenny MODERN SPECIES 7 s100a11 (ENSCGOG00000008603) ENSCGOG00000008608 s100t (ENSCGOG00000008612) CHRNB2 (ENSCGOG00000008616) SHE (ENSCGOG00000008620) ENSCGOG00000008624 tuft1a (ENSCGOG00000008627) C1orf43 (ENSCGOG00000008628) ENSCGOG00000008632 aqp10a (ENSCGOG00000008642) ENSCGOG00000009030 ENSCGOG00000009118 ENSCGOG00000009129 znf687a (ENSCGOG00000009133) psmd4b (ENSCGOG00000009141) ENSCGOG00000009291 ##22 pip5k1ab (ENSCGOG00000009402) ENSCGOG00000010120 ENSCGOG00000010123 them4 (ENSCGOG00000010127) ENSCGOG00000010128 ENSCGOG00000010129 ENSCGOG00000010130 ENSCGOG00000010133 ENSCGOG00000010135 nbn (ENSCGOG00000010137) OSGIN2 (ENSCGOG00000010144) gtpbp10 (ENSCGOG00000010146) ADAM22 (ENSCGOG00000010174) cldn12 (ENSCGOG00000010835) slc25a40 (ENSCGOG00000010840) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Gilthead seabream MODERN SPECIES 8 ENSSAUG00010019313 s100t (ENSSAUG00010019311) CHRNB2 (ENSSAUG00010019309) SHE (ENSSAUG00010019306) ENSSAUG00010019298 tuft1a (ENSSAUG00010019296) C1orf43 (ENSSAUG00010019293) ENSSAUG00010019292 aqp10a (ENSSAUG00010018987) ENSSAUG00010018632 ENSSAUG00010018609 ENSSAUG00010018608 ENSSAUG00010018606 znf687a (ENSSAUG00010018604) PSMD4 (ENSSAUG00010018503) ENSSAUG00010018501 ##22 pip5k1ab (ENSSAUG00010018271) ENSSAUG00010018266 ENSSAUG00010018260 them4 (ENSSAUG00010018258) si:dkey-87o1.2 (ENSSAUG00010018257) zgc:174935 (ENSSAUG00010018255) ENSSAUG00010018253 nbn (ENSSAUG00010018248) OSGIN2 (ENSSAUG00010018242) gtpbp10 (ENSSAUG00010018086) CLDN12 (ENSSAUG00010018077) ADAM22 (ENSSAUG00010017859) dbf4 (ENSSAUG00010017829) slc25a40 (ENSSAUG00010017828) rundc3b (ENSSAUG00010017810) Ballan wrasse MODERN SPECIES 174 s100t (ENSLBEG00000005335) CHRNB2 (ENSLBEG00000005352) SHE (ENSLBEG00000005361) ENSLBEG00000005375 tuft1a (ENSLBEG00000005392) C1orf43 (ENSLBEG00000005416) ENSLBEG00000005465 aqp10a (ENSLBEG00000005505) ENSLBEG00000005570 ENSLBEG00000005656 ENSLBEG00000005671 ENSLBEG00000005688 znf687a (ENSLBEG00000005738) psmd4b (ENSLBEG00000005775) pip5k1ab (ENSLBEG00000005835) ENSLBEG00000005863 ##22 ENSLBEG00000005876 ENSLBEG00000005939 them4 (ENSLBEG00000005992) si:dkey-87o1.2 (ENSLBEG00000006010) zgc:174935 (ENSLBEG00000006031) ENSLBEG00000006045 OSGIN2 (ENSLBEG00000006078) gtpbp10 (ENSLBEG00000006127) ADAM22 (ENSLBEG00000006186) cldn12 (ENSLBEG00000006318) dbf4 (ENSLBEG00000006371) slc25a40 (ENSLBEG00000006418) rundc3b (ENSLBEG00000006480) abcb4 (ENSLBEG00000006537) crot (ENSLBEG00000006658) Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Carangaria ANCESTRAL SPECIES 1 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Carangaria_A ANCESTRAL SPECIES 9 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00940000156889 ENSGT00400000022250 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Barramundi perch MODERN SPECIES 227 ZNF687 (ENSLCAG00010014911) psmd4b (ENSLCAG00010014928) ENSLCAG00010015004 ##22 pip5k1ab (ENSLCAG00010015012) ENSLCAG00010015021 ENSLCAG00010015025 them4 (ENSLCAG00010015031) si:dkey-87o1.2 (ENSLCAG00010015038) ENSLCAG00010000200 ENSLCAG00010000202 nbn (ENSLCAG00010000216) OSGIN2 (ENSLCAG00010000230) gtpbp10 (ENSLCAG00010000246) ADAM22 (ENSLCAG00010000863) cldn12 (ENSLCAG00010001839) dbf4 (ENSLCAG00010001845) slc25a40 (ENSLCAG00010001848) rundc3b (ENSLCAG00010001857) Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Tongue sole DUPLICATION Tongue sole DUPLICATION Tongue sole DUPLICATION Tongue sole MODERN SPECIES 4 ENSCSEG00000002074 s100t (ENSCSEG00000002071) CHRNB2 (ENSCSEG00000002067) SHE (ENSCSEG00000002066) ENSCSEG00000002061 tuft1a (ENSCSEG00000002057) ENSCSEG00000002053 C1orf43 (ENSCSEG00000002038) aqp10a (ENSCSEG00000002033) ENSCSEG00000002013 ENSCSEG00000002008 ENSCSEG00000002003 ENSCSEG00000001975 znf687a (ENSCSEG00000001965) psmd4b (ENSCSEG00000001952) ENSCSEG00000001950 ##22 ENSCSEG00000001947 ##22 ENSCSEG00000001939 ##22 ENSCSEG00000001929 ##22 pip5k1ab (ENSCSEG00000001913) ENSCSEG00000001889 ENSCSEG00000001878 ENSCSEG00000001874 ENSCSEG00000001871 nbn (ENSCSEG00000001861) OSGIN2 (ENSCSEG00000001845) gtpbp10 (ENSCSEG00000001830) cldn12 (ENSCSEG00000001827) ADAM22 (ENSCSEG00000001819) dbf4 (ENSCSEG00000001813) slc25a40 (ENSCSEG00000001811) Tongue sole MODERN SPECIES 4 rundc3b (ENSCSEG00000001793) abcb4 (ENSCSEG00000001802) slc25a40 (ENSCSEG00000001811) dbf4 (ENSCSEG00000001813) ADAM22 (ENSCSEG00000001819) cldn12 (ENSCSEG00000001827) gtpbp10 (ENSCSEG00000001830) OSGIN2 (ENSCSEG00000001845) nbn (ENSCSEG00000001861) ENSCSEG00000001871 ENSCSEG00000001874 ENSCSEG00000001878 ENSCSEG00000001889 pip5k1ab (ENSCSEG00000001913) ENSCSEG00000001929 ##22 ENSCSEG00000001939 ##22 ENSCSEG00000001947 ##22 ENSCSEG00000001950 ##22 psmd4b (ENSCSEG00000001952) znf687a (ENSCSEG00000001965) ENSCSEG00000001975 ENSCSEG00000002003 ENSCSEG00000002008 ENSCSEG00000002013 aqp10a (ENSCSEG00000002033) C1orf43 (ENSCSEG00000002038) ENSCSEG00000002053 tuft1a (ENSCSEG00000002057) ENSCSEG00000002061 SHE (ENSCSEG00000002066) CHRNB2 (ENSCSEG00000002067) Tongue sole MODERN SPECIES 15 tln2a (ENSCSEG00000011603) ddx28 (ENSCSEG00000011651) NFATC3 (ENSCSEG00000011657) esrp2 (ENSCSEG00000011686) ENSCSEG00000011737 AMFR (ENSCSEG00000011741) styx (ENSCSEG00000011765) gnpnat1 (ENSCSEG00000011760) ENSCSEG00000011770 MDGA1 (ENSCSEG00000011779) trpm7 (ENSCSEG00000011809) ENSCSEG00000011908 gnrhr2 (ENSCSEG00000011942) ENSCSEG00000011956 ENSCSEG00000011968 ENSCSEG00000011979 ##22 serf2b (ENSCSEG00000011987) SEMA4B (ENSCSEG00000011992) ZNF710 (ENSCSEG00000012005) idh2 (ENSCSEG00000012012) si:ch211-107o10.3 (ENSCSEG00000012021) tmed3 (ENSCSEG00000012045) RASGRF1 (ENSCSEG00000012050) wdr76 (ENSCSEG00000012070) FRMD5 (ENSCSEG00000012093) cry5 (ENSCSEG00000012138) ENSCSEG00000012211 sec11a (ENSCSEG00000012229) ENSCSEG00000012253 tspan3b (ENSCSEG00000012259) pstpip1b (ENSCSEG00000012277) Tongue sole DUPLICATION Tongue sole MODERN SPECIES 4 crot (ENSCSEG00000001783) rundc3b (ENSCSEG00000001793) abcb4 (ENSCSEG00000001802) slc25a40 (ENSCSEG00000001811) dbf4 (ENSCSEG00000001813) ADAM22 (ENSCSEG00000001819) cldn12 (ENSCSEG00000001827) gtpbp10 (ENSCSEG00000001830) OSGIN2 (ENSCSEG00000001845) nbn (ENSCSEG00000001861) ENSCSEG00000001871 ENSCSEG00000001874 ENSCSEG00000001878 ENSCSEG00000001889 pip5k1ab (ENSCSEG00000001913) ENSCSEG00000001929 ##22 ENSCSEG00000001939 ##22 ENSCSEG00000001947 ##22 ENSCSEG00000001950 ##22 psmd4b (ENSCSEG00000001952) znf687a (ENSCSEG00000001965) ENSCSEG00000001975 ENSCSEG00000002003 ENSCSEG00000002008 ENSCSEG00000002013 aqp10a (ENSCSEG00000002033) C1orf43 (ENSCSEG00000002038) ENSCSEG00000002053 tuft1a (ENSCSEG00000002057) ENSCSEG00000002061 SHE (ENSCSEG00000002066) Tongue sole MODERN SPECIES 4 abcb4 (ENSCSEG00000001802) slc25a40 (ENSCSEG00000001811) dbf4 (ENSCSEG00000001813) ADAM22 (ENSCSEG00000001819) cldn12 (ENSCSEG00000001827) gtpbp10 (ENSCSEG00000001830) OSGIN2 (ENSCSEG00000001845) nbn (ENSCSEG00000001861) ENSCSEG00000001871 ENSCSEG00000001874 ENSCSEG00000001878 ENSCSEG00000001889 pip5k1ab (ENSCSEG00000001913) ENSCSEG00000001929 ##22 ENSCSEG00000001939 ##22 ENSCSEG00000001947 ##22 ENSCSEG00000001950 ##22 psmd4b (ENSCSEG00000001952) znf687a (ENSCSEG00000001965) ENSCSEG00000001975 ENSCSEG00000002003 ENSCSEG00000002008 ENSCSEG00000002013 aqp10a (ENSCSEG00000002033) C1orf43 (ENSCSEG00000002038) ENSCSEG00000002053 tuft1a (ENSCSEG00000002057) ENSCSEG00000002061 SHE (ENSCSEG00000002066) CHRNB2 (ENSCSEG00000002067) s100t (ENSCSEG00000002071) Turbot MODERN SPECIES ENSSMAG00000037684 s100t (ENSSMAG00000034704) ENSSMAG00000016956 ENSSMAG00000030499 ENSSMAG00000016998 tuft1a (ENSSMAG00000027625) ENSSMAG00000017110 ENSSMAG00000017137 aqp10a (ENSSMAG00000017161) ENSSMAG00000017186 ENSSMAG00000017234 ENSSMAG00000025046 ENSSMAG00000025843 znf687a (ENSSMAG00000017261) psmd4b (ENSSMAG00000017291) ENSSMAG00000017477 ##22 PIP5K1A (ENSSMAG00000017483) ENSSMAG00000017560 ENSSMAG00000017620 them4 (ENSSMAG00000017713) si:dkey-87o1.2 (ENSSMAG00000028381) zgc:174935 (ENSSMAG00000021970) ENSSMAG00000017767 nbn (ENSSMAG00000017777) ENSSMAG00000017827 gtpbp10 (ENSSMAG00000017843) ADAM22 (ENSSMAG00000017921) cldn12 (ENSSMAG00000024024) dbf4 (ENSSMAG00000017966) slc25a40 (ENSSMAG00000017983) rundc3b (ENSSMAG00000018012) Ovalentaria ANCESTRAL SPECIES 3 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00990000204777 ENSGT01060000249136 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00990000204777 ENSGT01060000249136 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b Pomacentridae ANCESTRAL SPECIES 18 ENSGT00940000154172.b ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT00940000154172.b ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Amphiprion ANCESTRAL SPECIES 1 ENSGT00940000154172.b ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a ##22 ENSGT00940000154703.j ENSGT00390000006215.a ENSGT00940000167484 ENSGT00940000160047 ENSGT00390000015721 ENSGT00620000088774 ENSGT00940000154371.a.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000165993 ENSGT00940000159175 Clown anemonefish MODERN SPECIES 3486 C1orf43 (ENSAOCG00000000508) ENSAOCG00000008751 aqp10a (ENSAOCG00000008773) ENSAOCG00000008850 ENSAOCG00000008884 ENSAOCG00000008897 znf687a (ENSAOCG00000008916) psmd4b (ENSAOCG00000000529) ENSAOCG00000008978 ##22 pip5k1ab (ENSAOCG00000008993) ENSAOCG00000009015 ENSAOCG00000000543 Orange clownfish MODERN SPECIES 21 ENSAPEG00000003505 s100t (ENSAPEG00000003495) CHRNB2 (ENSAPEG00000003466) SHE (ENSAPEG00000003405) ENSAPEG00000003380 tuft1a (ENSAPEG00000003370) C1orf43 (ENSAPEG00000003365) ENSAPEG00000003355 aqp10a (ENSAPEG00000003280) ENSAPEG00000003173 ENSAPEG00000003149 ENSAPEG00000003136 ENSAPEG00000003116 znf687a (ENSAPEG00000003100) psmd4b (ENSAPEG00000003043) ENSAPEG00000003022 ##22 pip5k1ab (ENSAPEG00000002961) ENSAPEG00000002945 ENSAPEG00000002890 them4 (ENSAPEG00000002875) si:dkey-87o1.2 (ENSAPEG00000002867) zgc:174935 (ENSAPEG00000002860) ENSAPEG00000002845 nbn (ENSAPEG00000002828) OSGIN2 (ENSAPEG00000002782) gtpbp10 (ENSAPEG00000002756) cldn12 (ENSAPEG00000002735) ADAM22 (ENSAPEG00000002662) dbf4 (ENSAPEG00000002612) slc25a40 (ENSAPEG00000002553) rundc3b (ENSAPEG00000002514) Spiny chromis MODERN SPECIES 242 ENSAPOG00000023661 ENSAPOG00000023691 ENSAPOG00000023702 znf687a (ENSAPOG00000023720) psmd4b (ENSAPOG00000023778) ENSAPOG00000023792 ##22 pip5k1ab (ENSAPOG00000023814) ENSAPOG00000023835 ENSAPOG00000023918 them4 (ENSAPOG00000023985) si:dkey-87o1.2 (ENSAPOG00000023994) zgc:174935 (ENSAPOG00000024003) ENSAPOG00000024015 nbn (ENSAPOG00000024055) OSGIN2 (ENSAPOG00000024071) gtpbp10 (ENSAPOG00000024081) cldn12 (ENSAPOG00000024091) ADAM22 (ENSAPOG00000024106) dbf4 (ENSAPOG00000024129) slc25a40 (ENSAPOG00000024167) rundc3b (ENSAPOG00000001201) Bicolor damselfish MODERN SPECIES 753 C1orf43 (ENSSPAG00000002780) ENSSPAG00000002816 aqp10a (ENSSPAG00000002825) ENSSPAG00000002857 ENSSPAG00000002913 ENSSPAG00000002937 ZNF687 (ENSSPAG00000002960) ENSSPAG00000002977 psmd4b (ENSSPAG00000003011) ENSSPAG00000003041 ##22 pip5k1ab (ENSSPAG00000003070) ENSSPAG00000003177 ENSSPAG00000003205 ENSSPAG00000003238 ENSSPAG00000003278 ENSSPAG00000003291 nbn (ENSSPAG00000003316) OSGIN2 (ENSSPAG00000003386) gtpbp10 (ENSSPAG00000003435) ADAM22 (ENSSPAG00000003487) cldn12 (ENSSPAG00000003582) Pinecone sodierfish MODERN SPECIES 7 ENSMMDG00005014921 s100t (ENSMMDG00005014919) CHRNB2 (ENSMMDG00005014916) SHE (ENSMMDG00005014913) ENSMMDG00005014792 tuft1a (ENSMMDG00005014750) C1orf43 (ENSMMDG00005014738) ENSMMDG00005014733 aqp10a (ENSMMDG00005014315) ENSMMDG00005014297 ENSMMDG00005014288 ENSMMDG00005014282 ENSMMDG00005014279 znf687a (ENSMMDG00005014271) psmd4b (ENSMMDG00005014264) ENSMMDG00005014252 ##22 pip5k1ab (ENSMMDG00005014243) ENSMMDG00005014234 ENSMMDG00005014217 them4 (ENSMMDG00005014214) ENSMMDG00005014209 ENSMMDG00005014205 ENSMMDG00005014201 nbn (ENSMMDG00005014197) OSGIN2 (ENSMMDG00005014193) gtpbp10 (ENSMMDG00005014186) cldn12 (ENSMMDG00005014183) ADAM22 (ENSMMDG00005014182) dbf4 (ENSMMDG00005014177) slc25a40 (ENSMMDG00005014175) rundc3b (ENSMMDG00005014158) Cod MODERN SPECIES 2 s100t (ENSGMOG00000017367) ENSGMOG00000007897 ENSGMOG00000007899 ENSGMOG00000007910 tuft1a (ENSGMOG00000007924) ENSGMOG00000007932 ENSGMOG00000035644 ENSGMOG00000029608 aqp10a (ENSGMOG00000007960) ENSGMOG00000007963 ENSGMOG00000037102 ENSGMOG00000030489 ENSGMOG00000034138 znf687a (ENSGMOG00000027177) psmd4b (ENSGMOG00000003095) ENSGMOG00000007994 ##22 PIP5K1A (ENSGMOG00000007986) ENSGMOG00000008008 ENSGMOG00000008012 them4 (ENSGMOG00000022817) si:dkey-87o1.2 (ENSGMOG00000008021) zgc:174935 (ENSGMOG00000008027) ENSGMOG00000008039 ENSGMOG00000034523 ENSGMOG00000033067 ADAM22 (ENSGMOG00000008042) cldn12 (ENSGMOG00000008052) dbf4 (ENSGMOG00000008054) slc25a40 (ENSGMOG00000008063) rundc3b (ENSGMOG00000010067) abcb4 (ENSGMOG00000015175) Euteleosteomorpha ANCESTRAL SPECIES 351 ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT00390000008042.B ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a Acanthomorphata ANCESTRAL SPECIES 31 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Percomorphaceae ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Percomorphaceae_B DUPLICATION Percomorphaceae_B DUPLICATION Percomorphaceae_B DUPLICATION Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 European seabass MODERN SPECIES 6 alg2 (ENSDLAG00005007400) ENSDLAG00005007462 ENSDLAG00005008043 ino80c (ENSDLAG00005030102) ENSDLAG00005029303 dgat1b (ENSDLAG00005008165) ENSDLAG00005008937 ENSDLAG00005008955 ENSDLAG00005009028 ENSDLAG00005009282 ENSDLAG00005009384 ENSDLAG00005009398 glipr2l (ENSDLAG00005027280) steap4 (ENSDLAG00005009426) ENSDLAG00005009621 ##22 ENSDLAG00005009637 ##22 ENSDLAG00005009643 ##22 steap4 (ENSDLAG00005009653) ENSDLAG00005009686 ENSDLAG00005009691 ENSDLAG00005009825 ENSDLAG00005010134 ENSDLAG00005010143 ENSDLAG00005010150 ENSDLAG00005010162 ENSDLAG00005010174 ENSDLAG00005010253 rbm12bb (ENSDLAG00005026865) rbm12bb (ENSDLAG00005027878) ENSDLAG00005010269 ENSDLAG00005028226 Large yellow croaker MODERN SPECIES 484 FRRS1L (ENSLCRG00005005939) TMEM245 (ENSLCRG00005005954) GALNT1 (ENSLCRG00005006017) ino80c (ENSLCRG00005006098) SCRT1 (ENSLCRG00005006103) dgat1b (ENSLCRG00005006106) GPR20 (ENSLCRG00005006107) SLC45A4 (ENSLCRG00005006117) DENND3 (ENSLCRG00005006170) ATP4A (ENSLCRG00005006456) TBRG4 (ENSLCRG00005007295) ENSLCRG00005007298 glipr2l (ENSLCRG00005007299) steap4 (ENSLCRG00005007305) ENSLCRG00005007342 ##22 ENSLCRG00005007346 ##22 steap4 (ENSLCRG00005007351) ENSLCRG00005007366 mindy3 (ENSLCRG00005007377) ITGA8 (ENSLCRG00005007394) ATXN1 (ENSLCRG00005007408) fam8a1b (ENSLCRG00005007412) fabp4b (ENSLCRG00005007413) HEY1 (ENSLCRG00005007416) ENSLCRG00005007418 upp1 (ENSLCRG00005007421) ENSLCRG00005007424 rbm12bb (ENSLCRG00005007426) ENSLCRG00005007451 ENSLCRG00005008336 NBEAL2 (ENSLCRG00005008339) Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 8 GALNT1 (ENSSAUG00010004931) ino80c (ENSSAUG00010004902) SCRT1 (ENSSAUG00010004900) ENSSAUG00010004898 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) Gilthead seabream MODERN SPECIES 8 ino80c (ENSSAUG00010004902) SCRT1 (ENSSAUG00010004900) ENSSAUG00010004898 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) ENSSAUG00010016960 Gilthead seabream MODERN SPECIES 8 SCRT1 (ENSSAUG00010004900) ENSSAUG00010004898 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) ENSSAUG00010016960 upp1 (ENSSAUG00010016935) Ovalentaria ANCESTRAL SPECIES 3 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i NAME_6 ANCESTRAL SPECIES 36 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT00390000008042.B.r.b ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 Amazon molly MODERN SPECIES 328 FRRS1L (ENSPFOG00000017578) TMEM245 (ENSPFOG00000017604) GALNT1 (ENSPFOG00000017686) ino80c (ENSPFOG00000017709) SCRT1 (ENSPFOG00000017719) dgat1b (ENSPFOG00000017725) GPR20 (ENSPFOG00000017772) SLC45A4 (ENSPFOG00000017796) DENND3 (ENSPFOG00000017821) TBRG4 (ENSPFOG00000017918) ENSPFOG00000017937 glipr2l (ENSPFOG00000017944) steap4 (ENSPFOG00000017956) ENSPFOG00000018004 ##22 ENSPFOG00000018011 ##22 ENSPFOG00000018024 ##22 steap4 (ENSPFOG00000018027) Sailfin molly MODERN SPECIES 3165 ENSPLAG00000000408 ##22 ENSPLAG00000017671 ##22 steap4 (ENSPLAG00000017614) ENSPLAG00000017580 ##22 Guppy MODERN SPECIES 446 TMEM245 (ENSPREG00000018856) ENSPREG00000018944 ino80c (ENSPREG00000018970) SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 upp1 (ENSPREG00000020627) ENSPREG00000020761 Poecilia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.b ##22 NAME_6 ANCESTRAL SPECIES 168 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.b ##22 ENSGT00390000008042.B.r.a ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Sailfin molly MODERN SPECIES 11 FRRS1L (ENSPLAG00000010042) TMEM245 (ENSPLAG00000010020) GALNT1 (ENSPLAG00000009951) ino80c (ENSPLAG00000009882) SCRT1 (ENSPLAG00000009876) dgat1b (ENSPLAG00000009865) GPR20 (ENSPLAG00000009856) SLC45A4 (ENSPLAG00000009797) DENND3 (ENSPLAG00000009782) TBRG4 (ENSPLAG00000009771) ENSPLAG00000009762 glipr2l (ENSPLAG00000000219) steap4 (ENSPLAG00000009729) ENSPLAG00000009702 ##22 ENSPLAG00000009640 ##22 ENSPLAG00000009626 ##22 steap4 (ENSPLAG00000009564) Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.a ##22 Platyfish MODERN SPECIES 17 ENSXMAG00000029943 ino80c (ENSXMAG00000014496) SCRT1 (ENSXMAG00000027885) dgat1b (ENSXMAG00000014477) ENSXMAG00000014474 SLC45A4 (ENSXMAG00000014455) DENND3 (ENSXMAG00000014446) TBRG4 (ENSXMAG00000014438) ENSXMAG00000021824 glipr2l (ENSXMAG00000014422) ENSXMAG00000026561 steap4 (ENSXMAG00000024455) ENSXMAG00000028644 ##22 ENSXMAG00000030018 ##22 ENSXMAG00000023957 ##22 ENSXMAG00000025691 ##22 steap4 (ENSXMAG00000014397) ENSXMAG00000026284 ENSXMAG00000025877 mindy3 (ENSXMAG00000014375) ITGA8 (ENSXMAG00000014274) ATXN1 (ENSXMAG00000014270) fam8a1b (ENSXMAG00000026154) ENSXMAG00000014247 HEY1 (ENSXMAG00000014241) ENSXMAG00000025692 upp1 (ENSXMAG00000014219) ENSXMAG00000021038 rbm12bb (ENSXMAG00000014213) ENSXMAG00000014202 ENSXMAG00000029012 Poecilia ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.a ##22 Guppy MODERN SPECIES 446 ENSPREG00000018944 ino80c (ENSPREG00000018970) SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 upp1 (ENSPREG00000020627) ENSPREG00000020761 rbm12bb (ENSPREG00000020770) Poeciliinae ANCESTRAL SPECIES ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Poecilia ANCESTRAL SPECIES ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 NAME_6 ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 Amazon molly MODERN SPECIES 158 ENSPFOG00000023494 ##22 Sailfin molly MODERN SPECIES 3165 ENSPLAG00000017580 ##22 steap4 (ENSPLAG00000017614) ENSPLAG00000017671 ##22 ENSPLAG00000000408 ##22 Guppy MODERN SPECIES 446 ino80c (ENSPREG00000018970) SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 upp1 (ENSPREG00000020627) ENSPREG00000020761 rbm12bb (ENSPREG00000020770) ENSPREG00000020789 Platyfish MODERN SPECIES 17 GALNT1 (ENSXMAG00000013208) ENSXMAG00000029943 ino80c (ENSXMAG00000014496) SCRT1 (ENSXMAG00000027885) dgat1b (ENSXMAG00000014477) ENSXMAG00000014474 SLC45A4 (ENSXMAG00000014455) DENND3 (ENSXMAG00000014446) TBRG4 (ENSXMAG00000014438) ENSXMAG00000021824 glipr2l (ENSXMAG00000014422) ENSXMAG00000026561 steap4 (ENSXMAG00000024455) ENSXMAG00000028644 ##22 ENSXMAG00000030018 ##22 ENSXMAG00000023957 ##22 ENSXMAG00000025691 ##22 steap4 (ENSXMAG00000014397) ENSXMAG00000026284 ENSXMAG00000025877 mindy3 (ENSXMAG00000014375) ITGA8 (ENSXMAG00000014274) ATXN1 (ENSXMAG00000014270) fam8a1b (ENSXMAG00000026154) ENSXMAG00000014247 HEY1 (ENSXMAG00000014241) ENSXMAG00000025692 upp1 (ENSXMAG00000014219) ENSXMAG00000021038 rbm12bb (ENSXMAG00000014213) ENSXMAG00000014202 NAME_4 ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 Sheepshead minnow MODERN SPECIES 114 ENSCVAG00000011070 ENSCVAG00000011061 rbm12bb (ENSCVAG00000011047) ENSCVAG00000011040 upp1 (ENSCVAG00000011036) stmn2b (ENSCVAG00000011029) HEY1 (ENSCVAG00000011007) fam8a1b (ENSCVAG00000010989) fabp4b (ENSCVAG00000010949) ATXN1 (ENSCVAG00000010945) ITGA8 (ENSCVAG00000010937) mindy3 (ENSCVAG00000010690) ENSCVAG00000010615 steap4 (ENSCVAG00000000992) ENSCVAG00000000289 ##22 ENSCVAG00000010471 ##22 ENSCVAG00000010051 ##22 ENSCVAG00000010017 ##22 steap4 (ENSCVAG00000009911) glipr2l (ENSCVAG00000009900) ENSCVAG00000009889 TBRG4 (ENSCVAG00000009862) DENND3 (ENSCVAG00000009851) SLC45A4 (ENSCVAG00000009659) ENSCVAG00000009644 dgat1b (ENSCVAG00000009576) SCRT1 (ENSCVAG00000009561) ino80c (ENSCVAG00000009552) GALNT1 (ENSCVAG00000009543) TMEM245 (ENSCVAG00000009489) FRRS1L (ENSCVAG00000009416) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Cichlidae ANCESTRAL SPECIES 9 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 2 ino80c (ENSONIG00000006010) SCRT1 (ENSONIG00000006007) ENSONIG00000033292 dgat1b (ENSONIG00000006003) ENSONIG00000005999 SLC45A4 (ENSONIG00000005996) DENND3 (ENSONIG00000005993) ATP4A (ENSONIG00000005974) ENSONIG00000005969 ENSONIG00000033464 glipr2l (ENSONIG00000005963) steap4 (ENSONIG00000005957) ENSONIG00000005955 ##22 ENSONIG00000037297 ##22 ENSONIG00000005953 ##22 ENSONIG00000036973 ##22 ENSONIG00000042849 ##22 steap4 (ENSONIG00000033697) ENSONIG00000040814 ENSONIG00000003126 mindy3 (ENSONIG00000003121) ENSONIG00000003095 ATXN1 (ENSONIG00000003094) fam8a1b (ENSONIG00000003093) fabp4b (ENSONIG00000003090) HEY1 (ENSONIG00000003087) ENSONIG00000003084 upp1 (ENSONIG00000003081) ENSONIG00000030894 rbm12bb (ENSONIG00000020612) ENSONIG00000003077 Nile tilapia MODERN SPECIES 2 GALNT1 (ENSONIG00000006013) ino80c (ENSONIG00000006010) SCRT1 (ENSONIG00000006007) ENSONIG00000033292 dgat1b (ENSONIG00000006003) ENSONIG00000005999 SLC45A4 (ENSONIG00000005996) DENND3 (ENSONIG00000005993) ATP4A (ENSONIG00000005974) ENSONIG00000005969 ENSONIG00000033464 glipr2l (ENSONIG00000005963) steap4 (ENSONIG00000005957) ENSONIG00000005955 ##22 ENSONIG00000037297 ##22 ENSONIG00000005953 ##22 ENSONIG00000036973 ##22 ENSONIG00000042849 ##22 steap4 (ENSONIG00000033697) ENSONIG00000040814 ENSONIG00000003126 mindy3 (ENSONIG00000003121) ENSONIG00000003095 ATXN1 (ENSONIG00000003094) fam8a1b (ENSONIG00000003093) fabp4b (ENSONIG00000003090) HEY1 (ENSONIG00000003087) ENSONIG00000003084 upp1 (ENSONIG00000003081) ENSONIG00000030894 rbm12bb (ENSONIG00000020612) Nile tilapia MODERN SPECIES 13 nsun2 (ENSONIG00000007761) srd5a1 (ENSONIG00000040414) TENT4A (ENSONIG00000034482) adcy2b (ENSONIG00000007771) lg22h5orf49 (ENSONIG00000027138) trioa (ENSONIG00000007788) grb10a (ENSONIG00000007795) ENSONIG00000034974 ENSONIG00000042528 ENSONIG00000039204 ENSONIG00000030732 ENSONIG00000007806 ENSONIG00000007803 ENSONIG00000007805 ENSONIG00000010757 ENSONIG00000034007 ##22 ENSONIG00000039035 ##22 steap4 (ENSONIG00000010753) ENSONIG00000031258 ENSONIG00000036619 ENSONIG00000038895 ENSONIG00000011320 rpl14 (ENSONIG00000029144) ENSONIG00000015439 ENSONIG00000015436 ENSONIG00000028802 trim71 (ENSONIG00000015435) ENSONIG00000034885 ENSONIG00000015430 ENSONIG00000015426 zgc:103438 (ENSONIG00000040420) Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 Haplochromini ANCESTRAL SPECIES 6 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 Haplochromini_A ANCESTRAL SPECIES 18 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i.g ENSGT00940000160086 Haplochromini_B ANCESTRAL SPECIES 6 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276.`b ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT01100000263527.b.b.a.a.b.k.b.a.a.b.a.b.a.b.a.a.a.a ENSGT00940000158322.i.g Eastern happy MODERN SPECIES 2 TMEM245 (ENSACLG00000007372) GALNT1 (ENSACLG00000007261) ino80c (ENSACLG00000007245) SCRT1 (ENSACLG00000007162) dgat1b (ENSACLG00000007146) ENSACLG00000007137 ENSACLG00000007112 ENSACLG00000006600 ATP4A (ENSACLG00000006550) ENSACLG00000006544 ENSACLG00000006531 glipr2l (ENSACLG00000006517) steap4 (ENSACLG00000006504) ENSACLG00000006493 ##22 ENSACLG00000006484 ##22 ENSACLG00000006478 ##22 ENSACLG00000006471 ENSACLG00000006459 steap4 (ENSACLG00000006447) ENSACLG00000006443 ENSACLG00000006430 mindy3 (ENSACLG00000006399) ITGA8 (ENSACLG00000005710) ATXN1 (ENSACLG00000005697) fam8a1b (ENSACLG00000005678) fabp4b (ENSACLG00000005673) HEY1 (ENSACLG00000005650) ENSACLG00000005632 upp1 (ENSACLG00000005619) ENSACLG00000005606 ENSACLG00000005593 Zebra mbuna MODERN SPECIES 1093 slc50a1 (ENSMZEG00005015388) efna1b (ENSMZEG00005015381) efna3b (ENSMZEG00005015372) ENSMZEG00005015365 dgat1b (ENSMZEG00005015343) ENSMZEG00005015274 SLC45A4 (ENSMZEG00005015260) DENND3 (ENSMZEG00005015234) ATP4A (ENSMZEG00005015199) ENSMZEG00005015189 ENSMZEG00005015184 glipr2l (ENSMZEG00005015177) steap4 (ENSMZEG00005015173) ENSMZEG00005015166 ##22 ENSMZEG00005015161 ##22 ENSMZEG00005015150 ##22 ENSMZEG00005015140 steap4 (ENSMZEG00005015128) ENSMZEG00005015123 ENSMZEG00005015112 mindy3 (ENSMZEG00005015089) ITGA8 (ENSMZEG00005015070) ATXN1 (ENSMZEG00005015064) fam8a1b (ENSMZEG00005015056) fabp4b (ENSMZEG00005015051) HEY1 (ENSMZEG00005015039) ENSMZEG00005015026 upp1 (ENSMZEG00005015019) ENSMZEG00005015013 ENSMZEG00005015008 rbm12bb (ENSMZEG00005015005) Burton s mouthbrooder MODERN SPECIES 498 GALNT1 (ENSHBUG00000000985) ino80c (ENSHBUG00000000491) SCRT1 (ENSHBUG00000016621) dgat1b (ENSHBUG00000016634) GPR20 (ENSHBUG00000016670) SLC45A4 (ENSHBUG00000016735) ENSHBUG00000016763 ENSHBUG00000016770 ATP4A (ENSHBUG00000016838) ENSHBUG00000016854 ENSHBUG00000016872 glipr2l (ENSHBUG00000016906) steap4 (ENSHBUG00000016921) ENSHBUG00000016958 ##22 ENSHBUG00000017001 ##22 ENSHBUG00000017058 ##22 Lyretail cichlid MODERN SPECIES 369 GALNT1 (ENSNBRG00000013924) ino80c (ENSNBRG00000013978) SCRT1 (ENSNBRG00000013983) dgat1b (ENSNBRG00000013998) ENSNBRG00000014075 GPR20 (ENSNBRG00000014102) SLC45A4 (ENSNBRG00000014121) DENND3 (ENSNBRG00000014161) ATP4A (ENSNBRG00000014229) ENSNBRG00000014277 ENSNBRG00000014287 glipr2l (ENSNBRG00000014308) steap4 (ENSNBRG00000014328) ENSNBRG00000014342 ##22 ENSNBRG00000014409 ##22 ENSNBRG00000014417 ##22 ENSNBRG00000014439 ##22 steap4 (ENSNBRG00000014533) ENSNBRG00000014646 mindy3 (ENSNBRG00000014659) ITGA8 (ENSNBRG00000014692) ATXN1 (ENSNBRG00000014776) fam8a1b (ENSNBRG00000014794) fabp4b (ENSNBRG00000014819) HEY1 (ENSNBRG00000014983) ENSNBRG00000015005 upp1 (ENSNBRG00000015020) ENSNBRG00000015041 rbm12bb (ENSNBRG00000015057) ENSNBRG00000015062 ENSNBRG00000015101 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 303 GALNT1 (ENSACIG00000013565) ino80c (ENSACIG00000013594) SCRT1 (ENSACIG00000013613) dgat1b (ENSACIG00000013626) ENSACIG00000013673 SLC45A4 (ENSACIG00000013704) DENND3 (ENSACIG00000013765) ATP4A (ENSACIG00000013867) TBRG4 (ENSACIG00000013917) ENSACIG00000014027 glipr2l (ENSACIG00000014042) steap4 (ENSACIG00000014067) ENSACIG00000014169 ##22 ENSACIG00000014240 ##22 ENSACIG00000014294 ##22 ENSACIG00000014336 ##22 ENSACIG00000014380 steap4 (ENSACIG00000014398) ENSACIG00000014432 mindy3 (ENSACIG00000014511) ITGA8 (ENSACIG00000014542) ATXN1 (ENSACIG00000014661) fam8a1b (ENSACIG00000014675) ENSACIG00000014715 HEY1 (ENSACIG00000014891) ENSACIG00000014909 upp1 (ENSACIG00000014925) rbm12bb (ENSACIG00000014943) ENSACIG00000014991 ENSACIG00000015029 NBEAL2 (ENSACIG00000015072) Midas cichlid MODERN SPECIES 303 FRRS1L (ENSACIG00000013516) TMEM245 (ENSACIG00000013532) GALNT1 (ENSACIG00000013565) ino80c (ENSACIG00000013594) SCRT1 (ENSACIG00000013613) dgat1b (ENSACIG00000013626) ENSACIG00000013673 SLC45A4 (ENSACIG00000013704) DENND3 (ENSACIG00000013765) ATP4A (ENSACIG00000013867) TBRG4 (ENSACIG00000013917) ENSACIG00000014027 glipr2l (ENSACIG00000014042) steap4 (ENSACIG00000014067) ENSACIG00000014169 ##22 ENSACIG00000014240 ##22 ENSACIG00000014294 ##22 ENSACIG00000014336 ##22 ENSACIG00000014380 steap4 (ENSACIG00000014398) ENSACIG00000014432 mindy3 (ENSACIG00000014511) ITGA8 (ENSACIG00000014542) ATXN1 (ENSACIG00000014661) fam8a1b (ENSACIG00000014675) ENSACIG00000014715 HEY1 (ENSACIG00000014891) ENSACIG00000014909 upp1 (ENSACIG00000014925) rbm12bb (ENSACIG00000014943) ENSACIG00000014991 Pomacentridae ANCESTRAL SPECIES 18 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2765 ENSSPAG00000020692 ##22 ENSSPAG00000020710 ##22 Bicolor damselfish MODERN SPECIES 2765 ENSSPAG00000020692 ##22 ENSSPAG00000020710 ##22 Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 324 GPR20 (ENSSPAG00000002293) SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Bicolor damselfish MODERN SPECIES 324 SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Bicolor damselfish MODERN SPECIES 324 dgat1b (ENSSPAG00000002218) GPR20 (ENSSPAG00000002293) SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Amphiprion DUPLICATION Amphiprion ANCESTRAL SPECIES 1 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.l ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.k ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Orange clownfish MODERN SPECIES 21 GALNT1 (ENSAPEG00000000920) ino80c (ENSAPEG00000000884) SCRT1 (ENSAPEG00000000869) dgat1b (ENSAPEG00000000792) GPR20 (ENSAPEG00000000743) SLC45A4 (ENSAPEG00000000692) DENND3 (ENSAPEG00000000517) ATP4A (ENSAPEG00000000426) TBRG4 (ENSAPEG00000000413) ENSAPEG00000000405 glipr2l (ENSAPEG00000000368) steap4 (ENSAPEG00000000361) ENSAPEG00000000354 ##22 ENSAPEG00000000324 ##22 ENSAPEG00000022811 ##22 ENSAPEG00000022772 ##22 steap4 (ENSAPEG00000022725) ENSAPEG00000022714 ENSAPEG00000022694 mindy3 (ENSAPEG00000022645) ITGA8 (ENSAPEG00000022470) ATXN1 (ENSAPEG00000022436) fam8a1b (ENSAPEG00000022206) HEY1 (ENSAPEG00000022181) stmn2b (ENSAPEG00000022163) upp1 (ENSAPEG00000022138) ENSAPEG00000022115 rbm12bb (ENSAPEG00000022079) ENSAPEG00000021975 ENSAPEG00000021968 ENSAPEG00000021950 Clown anemonefish MODERN SPECIES 1347 ino80c (ENSAOCG00000003907) SCRT1 (ENSAOCG00000003910) dgat1b (ENSAOCG00000003933) GPR20 (ENSAOCG00000003950) SLC45A4 (ENSAOCG00000003972) DENND3 (ENSAOCG00000003995) ATP4A (ENSAOCG00000004011) ENSAOCG00000000120 ENSAOCG00000004020 glipr2l (ENSAOCG00000004026) steap4 (ENSAOCG00000004052) ENSAOCG00000004086 ##22 ENSAOCG00000004111 ##22 ENSAOCG00000004128 ##22 ENSAOCG00000004133 ##22 steap4 (ENSAOCG00000004145) NELL2 (ENSAOCG00000004181) ENSAOCG00000004203 szl (ENSAOCG00000004219) prl2 (ENSAOCG00000004241) ENSAOCG00000004267 NUAK1 (ENSAOCG00000004289) Amphiprion ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.l ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.k ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Clown anemonefish MODERN SPECIES 1347 ino80c (ENSAOCG00000003907) SCRT1 (ENSAOCG00000003910) dgat1b (ENSAOCG00000003933) GPR20 (ENSAOCG00000003950) SLC45A4 (ENSAOCG00000003972) DENND3 (ENSAOCG00000003995) ATP4A (ENSAOCG00000004011) ENSAOCG00000000120 ENSAOCG00000004020 glipr2l (ENSAOCG00000004026) steap4 (ENSAOCG00000004052) ENSAOCG00000004086 ##22 ENSAOCG00000004111 ##22 ENSAOCG00000004128 ##22 ENSAOCG00000004133 ##22 steap4 (ENSAOCG00000004145) NELL2 (ENSAOCG00000004181) ENSAOCG00000004203 szl (ENSAOCG00000004219) prl2 (ENSAOCG00000004241) ENSAOCG00000004267 NUAK1 (ENSAOCG00000004289) Orange clownfish MODERN SPECIES 21 TMEM245 (ENSAPEG00000000973) GALNT1 (ENSAPEG00000000920) ino80c (ENSAPEG00000000884) SCRT1 (ENSAPEG00000000869) dgat1b (ENSAPEG00000000792) GPR20 (ENSAPEG00000000743) SLC45A4 (ENSAPEG00000000692) DENND3 (ENSAPEG00000000517) ATP4A (ENSAPEG00000000426) TBRG4 (ENSAPEG00000000413) ENSAPEG00000000405 glipr2l (ENSAPEG00000000368) steap4 (ENSAPEG00000000361) ENSAPEG00000000354 ##22 ENSAPEG00000000324 ##22 ENSAPEG00000022811 ##22 ENSAPEG00000022772 ##22 steap4 (ENSAPEG00000022725) ENSAPEG00000022714 ENSAPEG00000022694 mindy3 (ENSAPEG00000022645) ITGA8 (ENSAPEG00000022470) ATXN1 (ENSAPEG00000022436) fam8a1b (ENSAPEG00000022206) HEY1 (ENSAPEG00000022181) stmn2b (ENSAPEG00000022163) upp1 (ENSAPEG00000022138) ENSAPEG00000022115 rbm12bb (ENSAPEG00000022079) ENSAPEG00000021975 ENSAPEG00000021968 Spiny chromis DUPLICATION Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 4381 ENSAPOG00000011249 ##22 Spiny chromis MODERN SPECIES 4384 ENSAPOG00000011163 ##22 Spiny chromis MODERN SPECIES 268 dgat1b (ENSAPOG00000004052) GPR20 (ENSAPOG00000004073) SLC45A4 (ENSAPOG00000004134) DENND3 (ENSAPOG00000004292) ATP4A (ENSAPOG00000004382) ENSAPOG00000000108 ENSAPOG00000004398 glipr2l (ENSAPOG00000004427) steap4 (ENSAPOG00000004450) ENSAPOG00000004493 ##22 ENSAPOG00000004512 ##22 ENSAPOG00000004534 ##22 steap4 (ENSAPOG00000004703) ENSAPOG00000004753 ENSAPOG00000004772 mindy3 (ENSAPOG00000004804) ITGA8 (ENSAPOG00000004971) ATXN1 (ENSAPOG00000005003) Percomorphaceae_B ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 Ovalentaria_B ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 Cichlidae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Haplochromini ANCESTRAL SPECIES 6 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Burton s mouthbrooder MODERN SPECIES 498 TMEM245 (ENSHBUG00000016495) GALNT1 (ENSHBUG00000000985) ino80c (ENSHBUG00000000491) SCRT1 (ENSHBUG00000016621) dgat1b (ENSHBUG00000016634) GPR20 (ENSHBUG00000016670) SLC45A4 (ENSHBUG00000016735) ENSHBUG00000016763 ENSHBUG00000016770 ATP4A (ENSHBUG00000016838) ENSHBUG00000016854 ENSHBUG00000016872 glipr2l (ENSHBUG00000016906) steap4 (ENSHBUG00000016921) ENSHBUG00000016958 ##22 ENSHBUG00000017001 ##22 ENSHBUG00000017058 ##22 Haplochromini_A ANCESTRAL SPECIES 18 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i.g Haplochromini_B ANCESTRAL SPECIES 6 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276.`b ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT01100000263527.b.b.a.a.b.k.b.a.a.b.a.b.a.b.a.a.a.a Zebra mbuna MODERN SPECIES 1093 TRIM46 (ENSMZEG00005015402) slc50a1 (ENSMZEG00005015388) efna1b (ENSMZEG00005015381) efna3b (ENSMZEG00005015372) ENSMZEG00005015365 dgat1b (ENSMZEG00005015343) ENSMZEG00005015274 SLC45A4 (ENSMZEG00005015260) DENND3 (ENSMZEG00005015234) ATP4A (ENSMZEG00005015199) ENSMZEG00005015189 ENSMZEG00005015184 glipr2l (ENSMZEG00005015177) steap4 (ENSMZEG00005015173) ENSMZEG00005015166 ##22 ENSMZEG00005015161 ##22 ENSMZEG00005015150 ##22 ENSMZEG00005015140 steap4 (ENSMZEG00005015128) ENSMZEG00005015123 ENSMZEG00005015112 mindy3 (ENSMZEG00005015089) ITGA8 (ENSMZEG00005015070) ATXN1 (ENSMZEG00005015064) fam8a1b (ENSMZEG00005015056) fabp4b (ENSMZEG00005015051) HEY1 (ENSMZEG00005015039) ENSMZEG00005015026 upp1 (ENSMZEG00005015019) ENSMZEG00005015013 ENSMZEG00005015008 Eastern happy MODERN SPECIES 2 FRRS1L (ENSACLG00000007429) TMEM245 (ENSACLG00000007372) GALNT1 (ENSACLG00000007261) ino80c (ENSACLG00000007245) SCRT1 (ENSACLG00000007162) dgat1b (ENSACLG00000007146) ENSACLG00000007137 ENSACLG00000007112 ENSACLG00000006600 ATP4A (ENSACLG00000006550) ENSACLG00000006544 ENSACLG00000006531 glipr2l (ENSACLG00000006517) steap4 (ENSACLG00000006504) ENSACLG00000006493 ##22 ENSACLG00000006484 ##22 ENSACLG00000006478 ##22 ENSACLG00000006471 ENSACLG00000006459 steap4 (ENSACLG00000006447) ENSACLG00000006443 ENSACLG00000006430 mindy3 (ENSACLG00000006399) ITGA8 (ENSACLG00000005710) ATXN1 (ENSACLG00000005697) fam8a1b (ENSACLG00000005678) fabp4b (ENSACLG00000005673) HEY1 (ENSACLG00000005650) ENSACLG00000005632 upp1 (ENSACLG00000005619) ENSACLG00000005606 P. nyererei MODERN SPECIES 379 alg2 (ENSPNYG00000017902) FRRS1L (ENSPNYG00000017887) TMEM245 (ENSPNYG00000017839) GALNT1 (ENSPNYG00000017769) ino80c (ENSPNYG00000017746) SCRT1 (ENSPNYG00000017733) dgat1b (ENSPNYG00000017672) ENSPNYG00000017627 SLC45A4 (ENSPNYG00000017594) DENND3 (ENSPNYG00000017530) ATP4A (ENSPNYG00000017472) ENSPNYG00000017453 ENSPNYG00000017431 glipr2l (ENSPNYG00000017424) steap4 (ENSPNYG00000017412) ENSPNYG00000017374 ##22 ENSPNYG00000017328 steap4 (ENSPNYG00000017296) ENSPNYG00000017280 ENSPNYG00000017265 mindy3 (ENSPNYG00000017223) ENSPNYG00000017129 ATXN1 (ENSPNYG00000017095) fam8a1b (ENSPNYG00000017079) fabp4b (ENSPNYG00000016885) HEY1 (ENSPNYG00000016854) ENSPNYG00000016836 upp1 (ENSPNYG00000016759) ENSPNYG00000016714 rbm12bb (ENSPNYG00000016696) SETD2 (ENSPNYG00000016617) Lyretail cichlid MODERN SPECIES 369 TMEM245 (ENSNBRG00000013874) GALNT1 (ENSNBRG00000013924) ino80c (ENSNBRG00000013978) SCRT1 (ENSNBRG00000013983) dgat1b (ENSNBRG00000013998) ENSNBRG00000014075 GPR20 (ENSNBRG00000014102) SLC45A4 (ENSNBRG00000014121) DENND3 (ENSNBRG00000014161) ATP4A (ENSNBRG00000014229) ENSNBRG00000014277 ENSNBRG00000014287 glipr2l (ENSNBRG00000014308) steap4 (ENSNBRG00000014328) ENSNBRG00000014342 ##22 ENSNBRG00000014409 ##22 ENSNBRG00000014417 ##22 ENSNBRG00000014439 ##22 steap4 (ENSNBRG00000014533) ENSNBRG00000014646 mindy3 (ENSNBRG00000014659) ITGA8 (ENSNBRG00000014692) ATXN1 (ENSNBRG00000014776) fam8a1b (ENSNBRG00000014794) fabp4b (ENSNBRG00000014819) HEY1 (ENSNBRG00000014983) ENSNBRG00000015005 upp1 (ENSNBRG00000015020) ENSNBRG00000015041 rbm12bb (ENSNBRG00000015057) ENSNBRG00000015062 Nile tilapia MODERN SPECIES 2 TMEM245 (ENSONIG00000006020) GALNT1 (ENSONIG00000006013) ino80c (ENSONIG00000006010) SCRT1 (ENSONIG00000006007) ENSONIG00000033292 dgat1b (ENSONIG00000006003) ENSONIG00000005999 SLC45A4 (ENSONIG00000005996) DENND3 (ENSONIG00000005993) ATP4A (ENSONIG00000005974) ENSONIG00000005969 ENSONIG00000033464 glipr2l (ENSONIG00000005963) steap4 (ENSONIG00000005957) ENSONIG00000005955 ##22 ENSONIG00000037297 ##22 ENSONIG00000005953 ##22 ENSONIG00000036973 ##22 ENSONIG00000042849 ##22 steap4 (ENSONIG00000033697) ENSONIG00000040814 ENSONIG00000003126 mindy3 (ENSONIG00000003121) ENSONIG00000003095 ATXN1 (ENSONIG00000003094) fam8a1b (ENSONIG00000003093) fabp4b (ENSONIG00000003090) HEY1 (ENSONIG00000003087) ENSONIG00000003084 upp1 (ENSONIG00000003081) ENSONIG00000030894 Midas cichlid MODERN SPECIES 303 TMEM245 (ENSACIG00000013532) GALNT1 (ENSACIG00000013565) ino80c (ENSACIG00000013594) SCRT1 (ENSACIG00000013613) dgat1b (ENSACIG00000013626) ENSACIG00000013673 SLC45A4 (ENSACIG00000013704) DENND3 (ENSACIG00000013765) ATP4A (ENSACIG00000013867) TBRG4 (ENSACIG00000013917) ENSACIG00000014027 glipr2l (ENSACIG00000014042) steap4 (ENSACIG00000014067) ENSACIG00000014169 ##22 ENSACIG00000014240 ##22 ENSACIG00000014294 ##22 ENSACIG00000014336 ##22 ENSACIG00000014380 steap4 (ENSACIG00000014398) ENSACIG00000014432 mindy3 (ENSACIG00000014511) ITGA8 (ENSACIG00000014542) ATXN1 (ENSACIG00000014661) fam8a1b (ENSACIG00000014675) ENSACIG00000014715 HEY1 (ENSACIG00000014891) ENSACIG00000014909 upp1 (ENSACIG00000014925) rbm12bb (ENSACIG00000014943) ENSACIG00000014991 ENSACIG00000015029 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Eupercaria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Eupecaria_C ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 8 ENSSAUG00010004898 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) ENSSAUG00010016960 upp1 (ENSSAUG00010016935) upp1 (ENSSAUG00010016933) Gilthead seabream MODERN SPECIES 8 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) ENSSAUG00010016960 upp1 (ENSSAUG00010016935) upp1 (ENSSAUG00010016933) ENSSAUG00010016931 Perciformes ANCESTRAL SPECIES 3 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.b ##22 ENSGT01030000235896.A ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Pike perch DUPLICATION Pike perch MODERN SPECIES 157 ENSSLUG00000017090 ENSSLUG00000017085 ENSSLUG00000017078 ENSSLUG00000017073 ENSSLUG00000017064 ENSSLUG00000017056 ENSSLUG00000017049 ENSSLUG00000017045 ENSSLUG00000016937 ENSSLUG00000016927 ENSSLUG00000016921 ENSSLUG00000016918 ENSSLUG00000016914 ENSSLUG00000016907 steap4 (ENSSLUG00000016831) ENSSLUG00000016787 ##22 ENSSLUG00000016727 ENSSLUG00000016714 ENSSLUG00000016707 ENSSLUG00000016703 ENSSLUG00000016697 ENSSLUG00000016695 ENSSLUG00000016691 svbp (ENSSLUG00000016684) wnt7aa (ENSSLUG00000016680) ptpdc1a (ENSSLUG00000016668) barx1 (ENSSLUG00000016661) phf2 (ENSSLUG00000016581) FAM120A (ENSSLUG00000016526) CASS4 (ENSSLUG00000016507) cstf1 (ENSSLUG00000016501) Pike perch MODERN SPECIES 15 GALNT1 (ENSSLUG00000000566) ENSSLUG00000000541 ino80c (ENSSLUG00000000539) SCRT1 (ENSSLUG00000000531) dgat1b (ENSSLUG00000000474) GPR20 (ENSSLUG00000000450) SLC45A4 (ENSSLUG00000000443) ENSSLUG00000000436 ATP4A (ENSSLUG00000000281) TBRG4 (ENSSLUG00000008956) ENSSLUG00000008950 glipr2l (ENSSLUG00000008940) steap4 (ENSSLUG00000008285) ENSSLUG00000008226 ##22 ENSSLUG00000008208 ##22 ENSSLUG00000008185 ##22 ENSSLUG00000008143 steap4 (ENSSLUG00000008131) ENSSLUG00000008123 mindy3 (ENSSLUG00000008112) ITGA8 (ENSSLUG00000008048) ATXN1 (ENSSLUG00000008016) fam8a1b (ENSSLUG00000008010) fabp4b (ENSSLUG00000008007) HEY1 (ENSSLUG00000008002) stmn2b (ENSSLUG00000007998) upp1 (ENSSLUG00000007989) ENSSLUG00000007980 ENSSLUG00000007755 ENSSLUG00000007694 NBEAL2 (ENSSLUG00000007105) Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Carangaria ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Carangaria_A ANCESTRAL SPECIES 9 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Seriola ANCESTRAL SPECIES 56 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781.l ENSGT00940000157781.k ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Yellowtail amberjack MODERN SPECIES 2583 GALNT1 (ENSSLDG00000017210) ino80c (ENSSLDG00000017181) SCRT1 (ENSSLDG00000017166) dgat1b (ENSSLDG00000016981) GPR20 (ENSSLDG00000016910) SLC45A4 (ENSSLDG00000016818) DENND3 (ENSSLDG00000016761) ATP4A (ENSSLDG00000016711) TBRG4 (ENSSLDG00000016682) ENSSLDG00000016666 glipr2l (ENSSLDG00000016639) steap4 (ENSSLDG00000016605) ENSSLDG00000016587 ##22 ENSSLDG00000016575 ##22 steap4 (ENSSLDG00000016551) ENSSLDG00000016521 ENSSLDG00000016498 mindy3 (ENSSLDG00000016434) ITGA8 (ENSSLDG00000016338) ATXN1 (ENSSLDG00000016306) fam8a1b (ENSSLDG00000016294) fabp4b (ENSSLDG00000016283) HEY1 (ENSSLDG00000016254) stmn2b (ENSSLDG00000016230) upp1 (ENSSLDG00000016210) upp1 (ENSSLDG00000016176) rbm12bb (ENSSLDG00000016156) ENSSLDG00000016113 ENSSLDG00000016085 Greater amberjack MODERN SPECIES 181 GALNT1 (ENSSDUG00000007783) ino80c (ENSSDUG00000007757) SCRT1 (ENSSDUG00000007752) dgat1b (ENSSDUG00000007680) GPR20 (ENSSDUG00000007653) SLC45A4 (ENSSDUG00000007629) DENND3 (ENSSDUG00000007422) ATP4A (ENSSDUG00000007332) TBRG4 (ENSSDUG00000007310) ENSSDUG00000007298 glipr2l (ENSSDUG00000007282) steap4 (ENSSDUG00000007253) ENSSDUG00000007241 ##22 ENSSDUG00000007154 ##22 steap4 (ENSSDUG00000007126) ENSSDUG00000007112 mindy3 (ENSSDUG00000007055) ITGA8 (ENSSDUG00000007007) ATXN1 (ENSSDUG00000006990) fam8a1b (ENSSDUG00000006979) fabp4b (ENSSDUG00000006962) HEY1 (ENSSDUG00000006942) stmn2b (ENSSDUG00000006930) upp1 (ENSSDUG00000006907) upp1 (ENSSDUG00000006872) ENSSDUG00000006858 rbm12bb (ENSSDUG00000006856) ENSSDUG00000006836 ENSSDUG00000006825 Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Anabantoidei ANCESTRAL SPECIES 3 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Climbing perch DUPLICATION Climbing perch DUPLICATION Climbing perch DUPLICATION Climbing perch MODERN SPECIES 7 ino80c (ENSATEG00000002294) SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 upp1 (ENSATEG00000004487) ENSATEG00000025965 rbm12bb (ENSATEG00000004578) ENSATEG00000004588 Climbing perch MODERN SPECIES 7 ENSATEG00000002131 ENSATEG00000002161 ENSATEG00000002235 ino80c (ENSATEG00000002294) SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 upp1 (ENSATEG00000004487) Climbing perch MODERN SPECIES 7 SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 upp1 (ENSATEG00000004487) ENSATEG00000025965 rbm12bb (ENSATEG00000004578) ENSATEG00000004588 ENSATEG00000004600 Climbing perch MODERN SPECIES 7 ENSATEG00000002235 ino80c (ENSATEG00000002294) SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 upp1 (ENSATEG00000004487) ENSATEG00000025965 rbm12bb (ENSATEG00000004578) Siamese fighting fish MODERN SPECIES 7 alg2 (ENSBSLG00000026374) FRRS1L (ENSBSLG00000026376) TMEM245 (ENSBSLG00000026385) GALNT1 (ENSBSLG00000026396) ino80c (ENSBSLG00000026401) SCRT1 (ENSBSLG00000026404) dgat1b (ENSBSLG00000013232) GPR20 (ENSBSLG00000013434) SLC45A4 (ENSBSLG00000013464) DENND3 (ENSBSLG00000013517) ATP4A (ENSBSLG00000013651) TBRG4 (ENSBSLG00000013776) ENSBSLG00000013781 glipr2l (ENSBSLG00000013791) ENSBSLG00000014079 ##22 ENSBSLG00000014188 ##22 ENSBSLG00000014236 ENSBSLG00000014245 mindy3 (ENSBSLG00000014268) ENSBSLG00000014407 ATXN1 (ENSBSLG00000014848) fam8a1b (ENSBSLG00000015166) fabp4b (ENSBSLG00000015305) HEY1 (ENSBSLG00000015441) ENSBSLG00000015459 upp1 (ENSBSLG00000015491) ENSBSLG00000015521 ENSBSLG00000015540 ENSBSLG00000015746 NBEAL2 (ENSBSLG00000016811) ccdc12 (ENSBSLG00000018067) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Ovalentaria ANCESTRAL SPECIES 3 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 NAME_4 ANCESTRAL SPECIES 1 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01030000237748 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 114 TMEM245 (ENSCVAG00000009489) GALNT1 (ENSCVAG00000009543) ino80c (ENSCVAG00000009552) SCRT1 (ENSCVAG00000009561) dgat1b (ENSCVAG00000009576) ENSCVAG00000009644 SLC45A4 (ENSCVAG00000009659) DENND3 (ENSCVAG00000009851) TBRG4 (ENSCVAG00000009862) ENSCVAG00000009889 glipr2l (ENSCVAG00000009900) steap4 (ENSCVAG00000009911) ENSCVAG00000010017 ##22 ENSCVAG00000010051 ##22 ENSCVAG00000010471 ##22 ENSCVAG00000000289 ##22 steap4 (ENSCVAG00000000992) ENSCVAG00000010615 mindy3 (ENSCVAG00000010690) ITGA8 (ENSCVAG00000010937) ATXN1 (ENSCVAG00000010945) fabp4b (ENSCVAG00000010949) fam8a1b (ENSCVAG00000010989) HEY1 (ENSCVAG00000011007) stmn2b (ENSCVAG00000011029) upp1 (ENSCVAG00000011036) ENSCVAG00000011040 rbm12bb (ENSCVAG00000011047) ENSCVAG00000011061 ENSCVAG00000011070 NBEAL2 (ENSCVAG00000011318) Sheepshead minnow MODERN SPECIES 368 dmc1 (ENSCVAG00000002453) tomm22 (ENSCVAG00000002445) maff (ENSCVAG00000002439) tmem184ba (ENSCVAG00000002431) csnk1e (ENSCVAG00000023326) ENSCVAG00000023314 ENSCVAG00000023299 ENSCVAG00000023234 ENSCVAG00000023204 ENSCVAG00000000603 pdap1a (ENSCVAG00000023187) cby1 (ENSCVAG00000023165) PLBD1 (ENSCVAG00000023149) ENSCVAG00000023080 ENSCVAG00000023073 ENSCVAG00000022988 ##22 lyrm1 (ENSCVAG00000022944) dcun1d3 (ENSCVAG00000022935) ENSCVAG00000022918 cox6b1 (ENSCVAG00000022894) ENSCVAG00000022883 luc7l (ENSCVAG00000022878) ENSCVAG00000022874 slc6a16b (ENSCVAG00000022856) ENSCVAG00000022818 SHANK1 (ENSCVAG00000022791) zgc:91999 (ENSCVAG00000022707) ENSCVAG00000022661 znf668 (ENSCVAG00000022648) ENSCVAG00000022644 RNF40 (ENSCVAG00000022625) Mummichog DUPLICATION Mummichog DUPLICATION Mummichog MODERN SPECIES 2197 ENSFHEG00000000608 ENSFHEG00000017487 ##22 ENSFHEG00000017477 ##22 ENSFHEG00000017456 ##22 steap4 (ENSFHEG00000017420) ENSFHEG00000000436 mindy3 (ENSFHEG00000017306) ITGA8 (ENSFHEG00000017238) ATXN1 (ENSFHEG00000017226) fam8a1b (ENSFHEG00000017220) ENSFHEG00000017203 HEY1 (ENSFHEG00000016508) ENSFHEG00000016506 upp1 (ENSFHEG00000016478) ENSFHEG00000016448 rbm12bb (ENSFHEG00000016425) ENSFHEG00000016416 ENSFHEG00000016410 Mummichog MODERN SPECIES 2197 ENSFHEG00000000608 ENSFHEG00000017487 ##22 ENSFHEG00000017477 ##22 ENSFHEG00000017456 ##22 steap4 (ENSFHEG00000017420) ENSFHEG00000000436 mindy3 (ENSFHEG00000017306) ITGA8 (ENSFHEG00000017238) ATXN1 (ENSFHEG00000017226) fam8a1b (ENSFHEG00000017220) ENSFHEG00000017203 HEY1 (ENSFHEG00000016508) ENSFHEG00000016506 upp1 (ENSFHEG00000016478) ENSFHEG00000016448 rbm12bb (ENSFHEG00000016425) ENSFHEG00000016416 Mummichog MODERN SPECIES 2197 ENSFHEG00000000608 ENSFHEG00000017487 ##22 ENSFHEG00000017477 ##22 ENSFHEG00000017456 ##22 steap4 (ENSFHEG00000017420) ENSFHEG00000000436 mindy3 (ENSFHEG00000017306) ITGA8 (ENSFHEG00000017238) ATXN1 (ENSFHEG00000017226) fam8a1b (ENSFHEG00000017220) ENSFHEG00000017203 HEY1 (ENSFHEG00000016508) ENSFHEG00000016506 upp1 (ENSFHEG00000016478) ENSFHEG00000016448 rbm12bb (ENSFHEG00000016425) ENSFHEG00000016416 ENSFHEG00000016410 NBEAL2 (ENSFHEG00000000412) Poeciliinae ANCESTRAL SPECIES ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Poecilia ANCESTRAL SPECIES ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Guppy DUPLICATION Guppy MODERN SPECIES 446 SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 upp1 (ENSPREG00000020627) ENSPREG00000020761 rbm12bb (ENSPREG00000020770) ENSPREG00000020789 ENSPREG00000020818 Guppy MODERN SPECIES 446 GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 upp1 (ENSPREG00000020627) ENSPREG00000020761 rbm12bb (ENSPREG00000020770) ENSPREG00000020789 ENSPREG00000020818 NBEAL2 (ENSPREG00000020859) ccdc12 (ENSPREG00000020932) NAME_6 ANCESTRAL SPECIES 36 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT00390000008042.B.r.b ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 Sailfin molly MODERN SPECIES 3165 ENSPLAG00000000408 ##22 ENSPLAG00000017671 ##22 steap4 (ENSPLAG00000017614) ENSPLAG00000017580 ##22 Aplocheiloidei ANCESTRAL SPECIES 2 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 81 GALNT1 (ENSKMAG00000005399) ino80c (ENSKMAG00000005456) SCRT1 (ENSKMAG00000005484) ENSKMAG00000005493 dgat1b (ENSKMAG00000005574) GPR20 (ENSKMAG00000005633) SLC45A4 (ENSKMAG00000005651) DENND3 (ENSKMAG00000005678) TBRG4 (ENSKMAG00000005739) ENSKMAG00000005765 glipr2l (ENSKMAG00000005792) steap4 (ENSKMAG00000005820) ENSKMAG00000005846 ##22 ENSKMAG00000005859 ##22 ENSKMAG00000005874 ##22 ENSKMAG00000005884 ##22 Mangrove rivulus MODERN SPECIES 92 ENSKMAG00000013179 ##22 steap4 (ENSKMAG00000013245) ENSKMAG00000013363 ENSKMAG00000013381 mindy3 (ENSKMAG00000013404) ITGA8 (ENSKMAG00000013457) ATXN1 (ENSKMAG00000013507) fam8a1b (ENSKMAG00000013533) HEY1 (ENSKMAG00000013571) ENSKMAG00000013603 upp1 (ENSKMAG00000013633) rbm12bb (ENSKMAG00000013704) rbm12bb (ENSKMAG00000013715) ENSKMAG00000013724 ENSKMAG00000013749 NBEAL2 (ENSKMAG00000013801) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000160086 Cichlidae ANCESTRAL SPECIES 9 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 ENSGT00940000165573 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 ENSGT00940000165573 Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 2 SCRT1 (ENSONIG00000006007) ENSONIG00000033292 dgat1b (ENSONIG00000006003) ENSONIG00000005999 SLC45A4 (ENSONIG00000005996) DENND3 (ENSONIG00000005993) ATP4A (ENSONIG00000005974) ENSONIG00000005969 ENSONIG00000033464 glipr2l (ENSONIG00000005963) steap4 (ENSONIG00000005957) ENSONIG00000005955 ##22 ENSONIG00000037297 ##22 ENSONIG00000005953 ##22 ENSONIG00000036973 ##22 ENSONIG00000042849 ##22 steap4 (ENSONIG00000033697) ENSONIG00000040814 ENSONIG00000003126 mindy3 (ENSONIG00000003121) ENSONIG00000003095 ATXN1 (ENSONIG00000003094) fam8a1b (ENSONIG00000003093) fabp4b (ENSONIG00000003090) HEY1 (ENSONIG00000003087) ENSONIG00000003084 upp1 (ENSONIG00000003081) ENSONIG00000030894 rbm12bb (ENSONIG00000020612) ENSONIG00000003077 ENSONIG00000003075 Nile tilapia MODERN SPECIES 13 srd5a1 (ENSONIG00000040414) TENT4A (ENSONIG00000034482) adcy2b (ENSONIG00000007771) lg22h5orf49 (ENSONIG00000027138) trioa (ENSONIG00000007788) grb10a (ENSONIG00000007795) ENSONIG00000034974 ENSONIG00000042528 ENSONIG00000039204 ENSONIG00000030732 ENSONIG00000007806 ENSONIG00000007803 ENSONIG00000007805 ENSONIG00000010757 ENSONIG00000034007 ##22 ENSONIG00000039035 ##22 steap4 (ENSONIG00000010753) ENSONIG00000031258 ENSONIG00000036619 ENSONIG00000038895 ENSONIG00000011320 rpl14 (ENSONIG00000029144) ENSONIG00000015439 ENSONIG00000015436 ENSONIG00000028802 trim71 (ENSONIG00000015435) ENSONIG00000034885 ENSONIG00000015430 ENSONIG00000015426 zgc:103438 (ENSONIG00000040420) SH3BP5 (ENSONIG00000015420) Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000160086 ENSGT00940000165573 Haplochromini ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 Burton s mouthbrooder MODERN SPECIES 444 ENSHBUG00000015991 ##22 steap4 (ENSHBUG00000016015) ENSHBUG00000016031 ENSHBUG00000016039 mindy3 (ENSHBUG00000016052) ITGA8 (ENSHBUG00000016072) ATXN1 (ENSHBUG00000016081) fam8a1b (ENSHBUG00000016102) fabp4b (ENSHBUG00000016114) HEY1 (ENSHBUG00000016143) ENSHBUG00000016187 upp1 (ENSHBUG00000016196) ENSHBUG00000016213 rbm12bb (ENSHBUG00000016227) SETD2 (ENSHBUG00000016287) ENSHBUG00000016311 Lyretail cichlid MODERN SPECIES 369 ino80c (ENSNBRG00000013978) SCRT1 (ENSNBRG00000013983) dgat1b (ENSNBRG00000013998) ENSNBRG00000014075 GPR20 (ENSNBRG00000014102) SLC45A4 (ENSNBRG00000014121) DENND3 (ENSNBRG00000014161) ATP4A (ENSNBRG00000014229) ENSNBRG00000014277 ENSNBRG00000014287 glipr2l (ENSNBRG00000014308) steap4 (ENSNBRG00000014328) ENSNBRG00000014342 ##22 ENSNBRG00000014409 ##22 ENSNBRG00000014417 ##22 ENSNBRG00000014439 ##22 steap4 (ENSNBRG00000014533) ENSNBRG00000014646 mindy3 (ENSNBRG00000014659) ITGA8 (ENSNBRG00000014692) ATXN1 (ENSNBRG00000014776) fam8a1b (ENSNBRG00000014794) fabp4b (ENSNBRG00000014819) HEY1 (ENSNBRG00000014983) ENSNBRG00000015005 upp1 (ENSNBRG00000015020) ENSNBRG00000015041 rbm12bb (ENSNBRG00000015057) ENSNBRG00000015062 ENSNBRG00000015101 NBEAL2 (ENSNBRG00000015161) Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Eupercaria ANCESTRAL SPECIES 1 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Perciformes ANCESTRAL SPECIES 3 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Cottioidei ANCESTRAL SPECIES 7 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 Lumpfish MODERN SPECIES 7 FRRS1L (ENSCLMG00005004974) TMEM245 (ENSCLMG00005004938) GALNT1 (ENSCLMG00005004927) ino80c (ENSCLMG00005004924) SCRT1 (ENSCLMG00005004922) dgat1b (ENSCLMG00005004920) ENSCLMG00005004914 SLC45A4 (ENSCLMG00005004905) ATP4A (ENSCLMG00005004899) ENSCLMG00005004897 ENSCLMG00005004895 glipr2l (ENSCLMG00005004893) steap4 (ENSCLMG00005004874) ENSCLMG00005004869 ##22 ENSCLMG00005004868 ##22 ENSCLMG00005004844 ##22 steap4 (ENSCLMG00005004398) ENSCLMG00005004352 mindy3 (ENSCLMG00005014021) ITGA8 (ENSCLMG00005014007) ATXN1 (ENSCLMG00005013993) fam8a1b (ENSCLMG00005013992) fabp4b (ENSCLMG00005013991) HEY1 (ENSCLMG00005013988) ENSCLMG00005013867 upp1 (ENSCLMG00005013864) rbm12bb (ENSCLMG00005013861) ENSCLMG00005012096 ENSCLMG00005012090 NBEAL2 (ENSCLMG00005011255) ccdc12 (ENSCLMG00005011234) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 European seabass MODERN SPECIES 6 ENSDLAG00005007462 ENSDLAG00005008043 ino80c (ENSDLAG00005030102) ENSDLAG00005029303 dgat1b (ENSDLAG00005008165) ENSDLAG00005008937 ENSDLAG00005008955 ENSDLAG00005009028 ENSDLAG00005009282 ENSDLAG00005009384 ENSDLAG00005009398 glipr2l (ENSDLAG00005027280) steap4 (ENSDLAG00005009426) ENSDLAG00005009621 ##22 ENSDLAG00005009637 ##22 ENSDLAG00005009643 ##22 steap4 (ENSDLAG00005009653) ENSDLAG00005009686 ENSDLAG00005009691 ENSDLAG00005009825 ENSDLAG00005010134 ENSDLAG00005010143 ENSDLAG00005010150 ENSDLAG00005010162 ENSDLAG00005010174 ENSDLAG00005010253 rbm12bb (ENSDLAG00005026865) rbm12bb (ENSDLAG00005027878) ENSDLAG00005010269 ENSDLAG00005028226 ENSDLAG00005011530 Gilthead seabream MODERN SPECIES 8 GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) HEY1 (ENSSAUG00010016961) ENSSAUG00010016960 upp1 (ENSSAUG00010016935) upp1 (ENSSAUG00010016933) ENSSAUG00010016931 rbm12bb (ENSSAUG00010016930) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Tetraodontidae ANCESTRAL SPECIES 14 ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Fugu MODERN SPECIES 19 SCRT1 (ENSTRUG00000011637) FRRS1L (ENSTRUG00000027256) ENSTRUG00000011425 GALNT1 (ENSTRUG00000011442) GALNT1 (ENSTRUG00000030494) ENSTRUG00000026908 SCRT1 (ENSTRUG00000028039) dgat1b (ENSTRUG00000011659) GPR20 (ENSTRUG00000011849) SLC45A4 (ENSTRUG00000011929) DENND3 (ENSTRUG00000030172) TBRG4 (ENSTRUG00000012262) ENSTRUG00000020768 glipr2l (ENSTRUG00000020064) steap4 (ENSTRUG00000012461) ENSTRUG00000032882 ##22 steap4 (ENSTRUG00000012895) ENSTRUG00000032029 ENSTRUG00000023938 mindy3 (ENSTRUG00000012972) ENSTRUG00000013059 ATXN1 (ENSTRUG00000024789) fam8a1b (ENSTRUG00000025730) ENSTRUG00000019876 HEY1 (ENSTRUG00000013573) ENSTRUG00000013626 upp1 (ENSTRUG00000013660) ENSTRUG00000029869 rbm12bb (ENSTRUG00000013738) ENSTRUG00000013742 ENSTRUG00000032635 Tetraodon MODERN SPECIES 26 ENSTNIG00000019830 ENSTNIG00000019643 ENSTNIG00000019557 ENSTNIG00000019838 ENSTNIG00000019544 ABCC4 (ENSTNIG00000019489) cldn10b (ENSTNIG00000019488) ENSTNIG00000019487 ENSTNIG00000019666 ENSTNIG00000019597 ENSTNIG00000019478 ENSTNIG00000001882 ENSTNIG00000019692 ENSTNIG00000019676 elmod1 (ENSTNIG00000019581) ENSTNIG00000019549 ##22 ENSTNIG00000019452 ENSTNIG00000019811 ENSTNIG00000019498 ENSTNIG00000019612 ENSTNIG00000001486 TBC1D14 (ENSTNIG00000019846) EXT1 (ENSTNIG00000019725) ENSTNIG00000019709 nedd9 (ENSTNIG00000019565) ENSTNIG00000019456 ENSTNIG00000019790 ENSTNIG00000002327 ENSTNIG00000019479 mrpl27 (ENSTNIG00000019792) stc1 (ENSTNIG00000019446) Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES 3 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.b ##22 ENSGT01030000235896.A ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Pike perch DUPLICATION Pike perch MODERN SPECIES 15 TMEM245 (ENSSLUG00000000695) GALNT1 (ENSSLUG00000000566) ENSSLUG00000000541 ino80c (ENSSLUG00000000539) SCRT1 (ENSSLUG00000000531) dgat1b (ENSSLUG00000000474) GPR20 (ENSSLUG00000000450) SLC45A4 (ENSSLUG00000000443) ENSSLUG00000000436 ATP4A (ENSSLUG00000000281) TBRG4 (ENSSLUG00000008956) ENSSLUG00000008950 glipr2l (ENSSLUG00000008940) steap4 (ENSSLUG00000008285) ENSSLUG00000008226 ##22 ENSSLUG00000008208 ##22 ENSSLUG00000008185 ##22 ENSSLUG00000008143 steap4 (ENSSLUG00000008131) ENSSLUG00000008123 mindy3 (ENSSLUG00000008112) ITGA8 (ENSSLUG00000008048) ATXN1 (ENSSLUG00000008016) fam8a1b (ENSSLUG00000008010) fabp4b (ENSSLUG00000008007) HEY1 (ENSSLUG00000008002) stmn2b (ENSSLUG00000007998) upp1 (ENSSLUG00000007989) ENSSLUG00000007980 ENSSLUG00000007755 ENSSLUG00000007694 Pike perch MODERN SPECIES 15 FRRS1L (ENSSLUG00000000741) TMEM245 (ENSSLUG00000000695) GALNT1 (ENSSLUG00000000566) ENSSLUG00000000541 ino80c (ENSSLUG00000000539) SCRT1 (ENSSLUG00000000531) dgat1b (ENSSLUG00000000474) GPR20 (ENSSLUG00000000450) SLC45A4 (ENSSLUG00000000443) ENSSLUG00000000436 ATP4A (ENSSLUG00000000281) TBRG4 (ENSSLUG00000008956) ENSSLUG00000008950 glipr2l (ENSSLUG00000008940) steap4 (ENSSLUG00000008285) ENSSLUG00000008226 ##22 ENSSLUG00000008208 ##22 ENSSLUG00000008185 ##22 ENSSLUG00000008143 steap4 (ENSSLUG00000008131) ENSSLUG00000008123 mindy3 (ENSSLUG00000008112) ITGA8 (ENSSLUG00000008048) ATXN1 (ENSSLUG00000008016) fam8a1b (ENSSLUG00000008010) fabp4b (ENSSLUG00000008007) HEY1 (ENSSLUG00000008002) stmn2b (ENSSLUG00000007998) upp1 (ENSSLUG00000007989) ENSSLUG00000007980 ENSSLUG00000007755 Channel bull blenny MODERN SPECIES 7 FRRS1L (ENSCGOG00000011806) TMEM245 (ENSCGOG00000011816) GALNT1 (ENSCGOG00000012241) ino80c (ENSCGOG00000012274) SCRT1 (ENSCGOG00000012277) dgat1b (ENSCGOG00000012302) GPR20 (ENSCGOG00000012807) SLC45A4 (ENSCGOG00000012809) DENND3 (ENSCGOG00000012927) ATP4A (ENSCGOG00000013438) ENSCGOG00000023263 ENSCGOG00000023274 glipr2l (ENSCGOG00000023276) steap4 (ENSCGOG00000023291) ENSCGOG00000023314 ##22 ENSCGOG00000023323 ##22 ENSCGOG00000023324 ENSCGOG00000023329 ##22 ENSCGOG00000023340 steap4 (ENSCGOG00000023347) ENSCGOG00000023352 ENSCGOG00000023356 mindy3 (ENSCGOG00000023365) ITGA8 (ENSCGOG00000023402) ATXN1 (ENSCGOG00000023427) fam8a1b (ENSCGOG00000023429) fabp4b (ENSCGOG00000023430) HEY1 (ENSCGOG00000023432) ENSCGOG00000023433 upp1 (ENSCGOG00000023435) ENSCGOG00000023438 Cottioidei ANCESTRAL SPECIES 7 ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 7 alg2 (ENSCLMG00005004984) FRRS1L (ENSCLMG00005004974) TMEM245 (ENSCLMG00005004938) GALNT1 (ENSCLMG00005004927) ino80c (ENSCLMG00005004924) SCRT1 (ENSCLMG00005004922) dgat1b (ENSCLMG00005004920) ENSCLMG00005004914 SLC45A4 (ENSCLMG00005004905) ATP4A (ENSCLMG00005004899) ENSCLMG00005004897 ENSCLMG00005004895 glipr2l (ENSCLMG00005004893) steap4 (ENSCLMG00005004874) ENSCLMG00005004869 ##22 ENSCLMG00005004868 ##22 ENSCLMG00005004844 ##22 steap4 (ENSCLMG00005004398) ENSCLMG00005004352 mindy3 (ENSCLMG00005014021) ITGA8 (ENSCLMG00005014007) ATXN1 (ENSCLMG00005013993) fam8a1b (ENSCLMG00005013992) fabp4b (ENSCLMG00005013991) HEY1 (ENSCLMG00005013988) ENSCLMG00005013867 upp1 (ENSCLMG00005013864) rbm12bb (ENSCLMG00005013861) ENSCLMG00005012096 ENSCLMG00005012090 NBEAL2 (ENSCLMG00005011255) Lumpfish MODERN SPECIES 7 sec61b (ENSCLMG00005004986) alg2 (ENSCLMG00005004984) FRRS1L (ENSCLMG00005004974) TMEM245 (ENSCLMG00005004938) GALNT1 (ENSCLMG00005004927) ino80c (ENSCLMG00005004924) SCRT1 (ENSCLMG00005004922) dgat1b (ENSCLMG00005004920) ENSCLMG00005004914 SLC45A4 (ENSCLMG00005004905) ATP4A (ENSCLMG00005004899) ENSCLMG00005004897 ENSCLMG00005004895 glipr2l (ENSCLMG00005004893) steap4 (ENSCLMG00005004874) ENSCLMG00005004869 ##22 ENSCLMG00005004868 ##22 ENSCLMG00005004844 ##22 steap4 (ENSCLMG00005004398) ENSCLMG00005004352 mindy3 (ENSCLMG00005014021) ITGA8 (ENSCLMG00005014007) ATXN1 (ENSCLMG00005013993) fam8a1b (ENSCLMG00005013992) fabp4b (ENSCLMG00005013991) HEY1 (ENSCLMG00005013988) ENSCLMG00005013867 upp1 (ENSCLMG00005013864) rbm12bb (ENSCLMG00005013861) ENSCLMG00005012096 ENSCLMG00005012090 Stickleback DUPLICATION Stickleback MODERN SPECIES 19 sec61b (ENSGACG00000009022) alg2 (ENSGACG00000009011) FRRS1L (ENSGACG00000009004) TMEM245 (ENSGACG00000008994) GALNT1 (ENSGACG00000008984) SCRT1 (ENSGACG00000008982) dgat1b (ENSGACG00000008951) GPR20 (ENSGACG00000008943) SLC45A4 (ENSGACG00000008936) DENND3 (ENSGACG00000008925) ATP4A (ENSGACG00000008911) TBRG4 (ENSGACG00000008909) ENSGACG00000008888 glipr2l (ENSGACG00000008879) steap4 (ENSGACG00000008834) ENSGACG00000008828 ##22 ENSGACG00000008819 ##22 steap4 (ENSGACG00000008786) ENSGACG00000008780 ENSGACG00000008776 mindy3 (ENSGACG00000008767) ITGA8 (ENSGACG00000008758) ino80c (ENSGACG00000008750) ATXN1 (ENSGACG00000008747) fam8a1b (ENSGACG00000008744) fabp4b (ENSGACG00000008725) HEY1 (ENSGACG00000008712) ENSGACG00000008708 upp1 (ENSGACG00000008684) rbm12bb (ENSGACG00000008682) ENSGACG00000008671 Stickleback MODERN SPECIES 19 alg2 (ENSGACG00000009011) FRRS1L (ENSGACG00000009004) TMEM245 (ENSGACG00000008994) GALNT1 (ENSGACG00000008984) SCRT1 (ENSGACG00000008982) dgat1b (ENSGACG00000008951) GPR20 (ENSGACG00000008943) SLC45A4 (ENSGACG00000008936) DENND3 (ENSGACG00000008925) ATP4A (ENSGACG00000008911) TBRG4 (ENSGACG00000008909) ENSGACG00000008888 glipr2l (ENSGACG00000008879) steap4 (ENSGACG00000008834) ENSGACG00000008828 ##22 ENSGACG00000008819 ##22 steap4 (ENSGACG00000008786) ENSGACG00000008780 ENSGACG00000008776 mindy3 (ENSGACG00000008767) ITGA8 (ENSGACG00000008758) ino80c (ENSGACG00000008750) ATXN1 (ENSGACG00000008747) fam8a1b (ENSGACG00000008744) fabp4b (ENSGACG00000008725) HEY1 (ENSGACG00000008712) ENSGACG00000008708 upp1 (ENSGACG00000008684) rbm12bb (ENSGACG00000008682) ENSGACG00000008671 ENSGACG00000008667 Perciformes ANCESTRAL SPECIES 176 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.b ##22 ENSGT01030000235896.A Perciformes_a ANCESTRAL SPECIES 3 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.b ##22 ENSGT01030000235896.A ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 7 ENSCGOG00000011803 FRRS1L (ENSCGOG00000011806) TMEM245 (ENSCGOG00000011816) GALNT1 (ENSCGOG00000012241) ino80c (ENSCGOG00000012274) SCRT1 (ENSCGOG00000012277) dgat1b (ENSCGOG00000012302) GPR20 (ENSCGOG00000012807) SLC45A4 (ENSCGOG00000012809) DENND3 (ENSCGOG00000012927) ATP4A (ENSCGOG00000013438) ENSCGOG00000023263 ENSCGOG00000023274 glipr2l (ENSCGOG00000023276) steap4 (ENSCGOG00000023291) ENSCGOG00000023314 ##22 ENSCGOG00000023323 ##22 ENSCGOG00000023324 ENSCGOG00000023329 ##22 ENSCGOG00000023340 steap4 (ENSCGOG00000023347) ENSCGOG00000023352 ENSCGOG00000023356 mindy3 (ENSCGOG00000023365) ITGA8 (ENSCGOG00000023402) ATXN1 (ENSCGOG00000023427) fam8a1b (ENSCGOG00000023429) fabp4b (ENSCGOG00000023430) HEY1 (ENSCGOG00000023432) ENSCGOG00000023433 upp1 (ENSCGOG00000023435) Channel bull blenny MODERN SPECIES 7 GALNT1 (ENSCGOG00000012241) ino80c (ENSCGOG00000012274) SCRT1 (ENSCGOG00000012277) dgat1b (ENSCGOG00000012302) GPR20 (ENSCGOG00000012807) SLC45A4 (ENSCGOG00000012809) DENND3 (ENSCGOG00000012927) ATP4A (ENSCGOG00000013438) ENSCGOG00000023263 ENSCGOG00000023274 glipr2l (ENSCGOG00000023276) steap4 (ENSCGOG00000023291) ENSCGOG00000023314 ##22 ENSCGOG00000023323 ##22 ENSCGOG00000023324 ENSCGOG00000023329 ##22 ENSCGOG00000023340 steap4 (ENSCGOG00000023347) ENSCGOG00000023352 ENSCGOG00000023356 mindy3 (ENSCGOG00000023365) ITGA8 (ENSCGOG00000023402) ATXN1 (ENSCGOG00000023427) fam8a1b (ENSCGOG00000023429) fabp4b (ENSCGOG00000023430) HEY1 (ENSCGOG00000023432) ENSCGOG00000023433 upp1 (ENSCGOG00000023435) ENSCGOG00000023438 rbm12bb (ENSCGOG00000023440) ENSCGOG00000023451 Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i European seabass MODERN SPECIES 6 sec61b (ENSDLAG00005007385) alg2 (ENSDLAG00005007400) ENSDLAG00005007462 ENSDLAG00005008043 ino80c (ENSDLAG00005030102) ENSDLAG00005029303 dgat1b (ENSDLAG00005008165) ENSDLAG00005008937 ENSDLAG00005008955 ENSDLAG00005009028 ENSDLAG00005009282 ENSDLAG00005009384 ENSDLAG00005009398 glipr2l (ENSDLAG00005027280) steap4 (ENSDLAG00005009426) ENSDLAG00005009621 ##22 ENSDLAG00005009637 ##22 ENSDLAG00005009643 ##22 steap4 (ENSDLAG00005009653) ENSDLAG00005009686 ENSDLAG00005009691 ENSDLAG00005009825 ENSDLAG00005010134 ENSDLAG00005010143 ENSDLAG00005010150 ENSDLAG00005010162 ENSDLAG00005010174 ENSDLAG00005010253 rbm12bb (ENSDLAG00005026865) rbm12bb (ENSDLAG00005027878) ENSDLAG00005010269 Large yellow croaker MODERN SPECIES 484 sec61b (ENSLCRG00005005933) FRRS1L (ENSLCRG00005005939) TMEM245 (ENSLCRG00005005954) GALNT1 (ENSLCRG00005006017) ino80c (ENSLCRG00005006098) SCRT1 (ENSLCRG00005006103) dgat1b (ENSLCRG00005006106) GPR20 (ENSLCRG00005006107) SLC45A4 (ENSLCRG00005006117) DENND3 (ENSLCRG00005006170) ATP4A (ENSLCRG00005006456) TBRG4 (ENSLCRG00005007295) ENSLCRG00005007298 glipr2l (ENSLCRG00005007299) steap4 (ENSLCRG00005007305) ENSLCRG00005007342 ##22 ENSLCRG00005007346 ##22 steap4 (ENSLCRG00005007351) ENSLCRG00005007366 mindy3 (ENSLCRG00005007377) ITGA8 (ENSLCRG00005007394) ATXN1 (ENSLCRG00005007408) fam8a1b (ENSLCRG00005007412) fabp4b (ENSLCRG00005007413) HEY1 (ENSLCRG00005007416) ENSLCRG00005007418 upp1 (ENSLCRG00005007421) ENSLCRG00005007424 rbm12bb (ENSLCRG00005007426) ENSLCRG00005007451 ENSLCRG00005008336 Gilthead seabream MODERN SPECIES 8 TMEM245 (ENSSAUG00010005693) GALNT1 (ENSSAUG00010004931) ino80c (ENSSAUG00010004902) SCRT1 (ENSSAUG00010004900) ENSSAUG00010004898 dgat1b (ENSSAUG00010004878) GPR20 (ENSSAUG00010004866) SLC45A4 (ENSSAUG00010004845) ino80c (ENSSAUG00010004837) DENND3 (ENSSAUG00010004817) ATP4A (ENSSAUG00010002845) TBRG4 (ENSSAUG00010002751) ENSSAUG00010002745 glipr2l (ENSSAUG00010002737) steap4 (ENSSAUG00010002101) ENSSAUG00010002074 ##22 ENSSAUG00010002044 ##22 ENSSAUG00010002035 ##22 ENSSAUG00010002031 ##22 ENSSAUG00010002029 ##22 ENSSAUG00010002022 ##22 ENSSAUG00010002010 ##22 steap4 (ENSSAUG00010002002) ENSSAUG00010002000 ENSSAUG00010001998 ENSSAUG00010001993 mindy3 (ENSSAUG00010001945) ITGA8 (ENSSAUG00010001756) ATXN1 (ENSSAUG00010016968) fam8a1b (ENSSAUG00010016967) fabp4b (ENSSAUG00010016966) Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 311 dgat1b (ENSLBEG00000023530) GPR20 (ENSLBEG00000023607) SLC45A4 (ENSLBEG00000023627) DENND3 (ENSLBEG00000023665) ENSLBEG00000023721 ENSLBEG00000023754 glipr2l (ENSLBEG00000023774) steap4 (ENSLBEG00000023805) steap4 (ENSLBEG00000023841) ENSLBEG00000023884 ##22 ENSLBEG00000023907 ##22 ENSLBEG00000023930 ##22 ENSLBEG00000023952 ENSLBEG00000023982 mindy3 (ENSLBEG00000024051) ITGA8 (ENSLBEG00000024146) ATXN1 (ENSLBEG00000024264) fam8a1b (ENSLBEG00000024297) fabp4b (ENSLBEG00000024324) HEY1 (ENSLBEG00000024340) ENSLBEG00000024365 upp1 (ENSLBEG00000024391) ENSLBEG00000024423 ENSLBEG00000024447 ENSLBEG00000024474 ENSLBEG00000024514 NBEAL2 (ENSLBEG00000024569) Ballan wrasse MODERN SPECIES 311 dgat1b (ENSLBEG00000023530) GPR20 (ENSLBEG00000023607) SLC45A4 (ENSLBEG00000023627) DENND3 (ENSLBEG00000023665) ENSLBEG00000023721 ENSLBEG00000023754 glipr2l (ENSLBEG00000023774) steap4 (ENSLBEG00000023805) steap4 (ENSLBEG00000023841) ENSLBEG00000023884 ##22 ENSLBEG00000023907 ##22 ENSLBEG00000023930 ##22 ENSLBEG00000023952 ENSLBEG00000023982 mindy3 (ENSLBEG00000024051) ITGA8 (ENSLBEG00000024146) ATXN1 (ENSLBEG00000024264) fam8a1b (ENSLBEG00000024297) fabp4b (ENSLBEG00000024324) HEY1 (ENSLBEG00000024340) ENSLBEG00000024365 upp1 (ENSLBEG00000024391) ENSLBEG00000024423 ENSLBEG00000024447 ENSLBEG00000024474 Ballan wrasse MODERN SPECIES 311 dgat1b (ENSLBEG00000023530) GPR20 (ENSLBEG00000023607) SLC45A4 (ENSLBEG00000023627) DENND3 (ENSLBEG00000023665) ENSLBEG00000023721 ENSLBEG00000023754 glipr2l (ENSLBEG00000023774) steap4 (ENSLBEG00000023805) steap4 (ENSLBEG00000023841) ENSLBEG00000023884 ##22 ENSLBEG00000023907 ##22 ENSLBEG00000023930 ##22 ENSLBEG00000023952 ENSLBEG00000023982 mindy3 (ENSLBEG00000024051) ITGA8 (ENSLBEG00000024146) ATXN1 (ENSLBEG00000024264) fam8a1b (ENSLBEG00000024297) fabp4b (ENSLBEG00000024324) HEY1 (ENSLBEG00000024340) ENSLBEG00000024365 upp1 (ENSLBEG00000024391) ENSLBEG00000024423 ENSLBEG00000024447 ENSLBEG00000024474 ENSLBEG00000024514 Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Carangaria ANCESTRAL SPECIES 1 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Carangaria_A ANCESTRAL SPECIES 9 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Seriola ANCESTRAL SPECIES 56 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781.l ENSGT00940000157781.k ENSGT00940000171520 ENSGT00940000158322.i Greater amberjack MODERN SPECIES 181 GALNT1 (ENSSDUG00000007783) ino80c (ENSSDUG00000007757) SCRT1 (ENSSDUG00000007752) dgat1b (ENSSDUG00000007680) GPR20 (ENSSDUG00000007653) SLC45A4 (ENSSDUG00000007629) DENND3 (ENSSDUG00000007422) ATP4A (ENSSDUG00000007332) TBRG4 (ENSSDUG00000007310) ENSSDUG00000007298 glipr2l (ENSSDUG00000007282) steap4 (ENSSDUG00000007253) ENSSDUG00000007241 ##22 ENSSDUG00000007154 ##22 steap4 (ENSSDUG00000007126) ENSSDUG00000007112 mindy3 (ENSSDUG00000007055) ITGA8 (ENSSDUG00000007007) ATXN1 (ENSSDUG00000006990) fam8a1b (ENSSDUG00000006979) fabp4b (ENSSDUG00000006962) HEY1 (ENSSDUG00000006942) stmn2b (ENSSDUG00000006930) upp1 (ENSSDUG00000006907) upp1 (ENSSDUG00000006872) ENSSDUG00000006858 rbm12bb (ENSSDUG00000006856) ENSSDUG00000006836 Yellowtail amberjack MODERN SPECIES 2583 GALNT1 (ENSSLDG00000017210) ino80c (ENSSLDG00000017181) SCRT1 (ENSSLDG00000017166) dgat1b (ENSSLDG00000016981) GPR20 (ENSSLDG00000016910) SLC45A4 (ENSSLDG00000016818) DENND3 (ENSSLDG00000016761) ATP4A (ENSSLDG00000016711) TBRG4 (ENSSLDG00000016682) ENSSLDG00000016666 glipr2l (ENSSLDG00000016639) steap4 (ENSSLDG00000016605) ENSSLDG00000016587 ##22 ENSSLDG00000016575 ##22 steap4 (ENSSLDG00000016551) ENSSLDG00000016521 ENSSLDG00000016498 mindy3 (ENSSLDG00000016434) ITGA8 (ENSSLDG00000016338) ATXN1 (ENSSLDG00000016306) fam8a1b (ENSSLDG00000016294) fabp4b (ENSSLDG00000016283) HEY1 (ENSSLDG00000016254) stmn2b (ENSSLDG00000016230) upp1 (ENSSLDG00000016210) upp1 (ENSSLDG00000016176) rbm12bb (ENSSLDG00000016156) ENSSLDG00000016113 Barramundi perch MODERN SPECIES 17 USP53 (ENSLCAG00010016704) PTPRD (ENSLCAG00010016357) TYRP1 (ENSLCAG00010016274) LURAP1L (ENSLCAG00010016272) MPDZ (ENSLCAG00010016203) ADGRL3 (ENSLCAG00010015142) ENSLCAG00010014177 CAAP1 (ENSLCAG00010014034) SLC45A4 (ENSLCAG00010014030) DENND3 (ENSLCAG00010013982) ATP4A (ENSLCAG00010013219) TBRG4 (ENSLCAG00010013111) ENSLCAG00010013106 glipr2l (ENSLCAG00010013101) steap4 (ENSLCAG00010013095) ENSLCAG00010013088 ##22 steap4 (ENSLCAG00010013083) ENSLCAG00010013081 ENSLCAG00010013078 mindy3 (ENSLCAG00010013064) ITGA8 (ENSLCAG00010013051) ATXN1 (ENSLCAG00010013047) fam8a1b (ENSLCAG00010013046) ENSLCAG00010013042 HEY1 (ENSLCAG00010013038) ENSLCAG00010013034 upp1 (ENSLCAG00010013031) ENSLCAG00010013026 rbm12bb (ENSLCAG00010013024) SETD2 (ENSLCAG00010012981) ENSLCAG00010012969 Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Turbot MODERN SPECIES ENSSMAG00000008400 ENSSMAG00000022159 ENSSMAG00000019137 ENSSMAG00000019182 ino80c (ENSSMAG00000031228) ENSSMAG00000037517 dgat1b (ENSSMAG00000019213) ENSSMAG00000019229 ENSSMAG00000019249 ENSSMAG00000019259 ENSSMAG00000019281 ENSSMAG00000019314 ENSSMAG00000019325 glipr2l (ENSSMAG00000019343) steap4 (ENSSMAG00000019366) ENSSMAG00000019419 ##22 steap4 (ENSSMAG00000019462) ENSSMAG00000019486 ENSSMAG00000019489 mindy3 (ENSSMAG00000019499) ENSSMAG00000019560 ENSSMAG00000019621 ENSSMAG00000019633 ENSSMAG00000019646 ENSSMAG00000019653 ENSSMAG00000019673 upp1 (ENSSMAG00000019687) ENSSMAG00000019697 rbm12bb (ENSSMAG00000019708) ENSSMAG00000019710 ENSSMAG00000019741 Tongue sole MODERN SPECIES 4 AIF1 (ENSCSEG00000007741) ENSCSEG00000007747 ENSCSEG00000007780 ENSCSEG00000007808 ENSCSEG00000007813 RXRB (ENSCSEG00000007853) ENSCSEG00000008156 dgat1b (ENSCSEG00000008167) SLC45A4 (ENSCSEG00000008212) DENND3 (ENSCSEG00000008272) ENSCSEG00000008459 ENSCSEG00000008471 glipr2l (ENSCSEG00000008475) steap4 (ENSCSEG00000008493) TMEM245 (ENSCSEG00000008508) ENSCSEG00000008535 ##22 GALNT1 (ENSCSEG00000008558) ino80c (ENSCSEG00000008588) SCRT1 (ENSCSEG00000008596) fbxl4 (ENSCSEG00000008611) FAXC (ENSCSEG00000008638) coq3 (ENSCSEG00000008645) pnisr (ENSCSEG00000008657) usp45 (ENSCSEG00000008663) tstd3 (ENSCSEG00000008672) zgc:172323 (ENSCSEG00000008680) prdm13 (ENSCSEG00000008693) me1 (ENSCSEG00000008708) prss35 (ENSCSEG00000008757) ENSCSEG00000008760 DOP1A (ENSCSEG00000008783) Anabantaria ANCESTRAL SPECIES 2 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Anabantoidei ANCESTRAL SPECIES 3 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.b ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Climbing perch DUPLICATION Climbing perch MODERN SPECIES 7 alg2 (ENSATEG00000002090) ENSATEG00000002131 ENSATEG00000002161 ENSATEG00000002235 ino80c (ENSATEG00000002294) SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 Climbing perch MODERN SPECIES 7 ENSATEG00000002161 ENSATEG00000002235 ino80c (ENSATEG00000002294) SCRT1 (ENSATEG00000027649) dgat1b (ENSATEG00000002316) ENSATEG00000002323 ENSATEG00000002381 ENSATEG00000002388 ENSATEG00000002404 ENSATEG00000002508 ENSATEG00000002515 glipr2l (ENSATEG00000002525) steap4 (ENSATEG00000002555) ENSATEG00000002564 ##22 ENSATEG00000002576 ##22 ENSATEG00000002691 ##22 ENSATEG00000002719 ##22 ENSATEG00000029095 ##22 ENSATEG00000002762 ##22 ENSATEG00000029510 ENSATEG00000002949 ENSATEG00000002958 ENSATEG00000002982 ENSATEG00000002994 ENSATEG00000026707 ENSATEG00000026497 ENSATEG00000004430 ENSATEG00000004452 ENSATEG00000027238 upp1 (ENSATEG00000004487) ENSATEG00000025965 Siamese fighting fish MODERN SPECIES 7 sec61b (ENSBSLG00000026372) alg2 (ENSBSLG00000026374) FRRS1L (ENSBSLG00000026376) TMEM245 (ENSBSLG00000026385) GALNT1 (ENSBSLG00000026396) ino80c (ENSBSLG00000026401) SCRT1 (ENSBSLG00000026404) dgat1b (ENSBSLG00000013232) GPR20 (ENSBSLG00000013434) SLC45A4 (ENSBSLG00000013464) DENND3 (ENSBSLG00000013517) ATP4A (ENSBSLG00000013651) TBRG4 (ENSBSLG00000013776) ENSBSLG00000013781 glipr2l (ENSBSLG00000013791) ENSBSLG00000014079 ##22 ENSBSLG00000014188 ##22 ENSBSLG00000014236 ENSBSLG00000014245 mindy3 (ENSBSLG00000014268) ENSBSLG00000014407 ATXN1 (ENSBSLG00000014848) fam8a1b (ENSBSLG00000015166) fabp4b (ENSBSLG00000015305) HEY1 (ENSBSLG00000015441) ENSBSLG00000015459 upp1 (ENSBSLG00000015491) ENSBSLG00000015521 ENSBSLG00000015540 ENSBSLG00000015746 NBEAL2 (ENSBSLG00000016811) Zig-zag eel MODERN SPECIES 7 ENSMAMG00000011774 ENSMAMG00000011736 ino80c (ENSMAMG00000011718) ENSMAMG00000011698 ENSMAMG00000026338 dgat1b (ENSMAMG00000011382) ENSMAMG00000011330 ENSMAMG00000011286 ENSMAMG00000011271 ENSMAMG00000011226 ENSMAMG00000011208 ENSMAMG00000011198 ENSMAMG00000027606 ENSMAMG00000024331 steap4 (ENSMAMG00000011162) ENSMAMG00000011157 ##22 ENSMAMG00000011146 ENSMAMG00000006966 ENSMAMG00000006881 ENSMAMG00000006864 ENSMAMG00000026607 ENSMAMG00000006842 ENSMAMG00000006833 ENSMAMG00000006804 ENSMAMG00000006778 ENSMAMG00000027476 ENSMAMG00000006768 ENSMAMG00000027516 ENSMAMG00000006735 ENSMAMG00000027365 ENSMAMG00000006708 Ovalentaria ANCESTRAL SPECIES 3 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Atherinomorphae ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES 224 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g ##22 ENSGT01030000235896.A Oryzias_a DUPLICATION Oryzias_a ANCESTRAL SPECIES 9 ENSGT00940000158454 ENSGT00940000165573 ENSGT00940000166273 ENSGT00940000158322.i ENSGT00940000171520 ENSGT00940000157781 ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a ##22 ENSGT00390000020276.u ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000155784.C.u.a ENSGT00950000182914.a.a.a.c.a ENSGT01040000240444.B.b ENSGT00950000183081.b.i.a ENSGT00940000154491.c.b.a ENSGT00390000014303 ENSGT00940000154732.b ENSGT00390000001667 ENSGT00940000159043 Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000024466 upp1 (ENSORLG00000008240) ENSORLG00000008251 ENSORLG00000008268 fabp4b (ENSORLG00000008282) ENSORLG00000027307 fam8a1b (ENSORLG00000023567) ATXN1 (ENSORLG00000008288) ITGA8 (ENSORLG00000008330) ENSORLG00000024473 mindy3 (ENSORLG00000008352) ENSORLG00000008362 ENSORLG00000029148 ENSORLG00000028543 ##22 ENSORLG00000008373 ENSORLG00000008394 ##22 ENSORLG00000027565 ##22 steap4 (ENSORLG00000008484) ENSORLG00000030212 ##22 glipr2l (ENSORLG00000008495) ENSORLG00000029826 TBRG4 (ENSORLG00000008558) ENSORLG00000008599 ENSORLG00000008614 ENSORLG00000022980 dgat1b (ENSORLG00000008631) ENSORLG00000025651 ENSORLG00000025955 GALNT1 (ENSORLG00000008696) ino80c (ENSORLG00000008652) TMEM245 (ENSORLG00000008707) Chinese medaka MODERN SPECIES 493 ENSOSIG00000007222 ENSOSIG00000007225 rbm12bb (ENSOSIG00000007701) ENSOSIG00000007702 upp1 (ENSOSIG00000007704) ENSOSIG00000007708 HEY1 (ENSOSIG00000007959) fabp4b (ENSOSIG00000007961) fam8a1b (ENSOSIG00000008079) ATXN1 (ENSOSIG00000008122) ITGA8 (ENSOSIG00000008123) mindy3 (ENSOSIG00000008130) ENSOSIG00000008148 ENSOSIG00000008151 glipr2l (ENSOSIG00000008153) ENSOSIG00000008155 ##22 ENSOSIG00000008156 ##22 steap4 (ENSOSIG00000008161) ENSOSIG00000008165 ##22 ENSOSIG00000008169 TBRG4 (ENSOSIG00000008175) ENSOSIG00000008177 SLC45A4 (ENSOSIG00000008184) dgat1b (ENSOSIG00000008210) SCRT1 (ENSOSIG00000008213) ino80c (ENSOSIG00000008214) GALNT1 (ENSOSIG00000008218) ENSOSIG00000008271 FRRS1L (ENSOSIG00000008272) alg2 (ENSOSIG00000008273) sec61b (ENSOSIG00000008275) Oryzias_a ANCESTRAL SPECIES 272 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g.b ##22 ENSGT01030000235896.A Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000024103 rbm12bb (ENSORLG00000008228) ENSORLG00000024466 upp1 (ENSORLG00000008240) ENSORLG00000008251 ENSORLG00000008268 fabp4b (ENSORLG00000008282) ENSORLG00000027307 fam8a1b (ENSORLG00000023567) ATXN1 (ENSORLG00000008288) ITGA8 (ENSORLG00000008330) ENSORLG00000024473 mindy3 (ENSORLG00000008352) ENSORLG00000008362 ENSORLG00000029148 ENSORLG00000028543 ##22 ENSORLG00000008373 ENSORLG00000008394 ##22 ENSORLG00000027565 ##22 steap4 (ENSORLG00000008484) ENSORLG00000030212 ##22 glipr2l (ENSORLG00000008495) ENSORLG00000029826 TBRG4 (ENSORLG00000008558) ENSORLG00000008599 ENSORLG00000008614 ENSORLG00000022980 dgat1b (ENSORLG00000008631) ENSORLG00000025651 ENSORLG00000025955 GALNT1 (ENSORLG00000008696) Chinese medaka MODERN SPECIES 3576 ENSOSIG00000002416 ##22 Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000165573 ENSGT00940000166273 ENSGT00940000158322.i ENSGT00940000171520 ENSGT00940000157781 ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000020276 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000155784.C.u.a ENSGT00950000182914.a.a.a.c.a ENSGT01040000240444.B.b ENSGT00950000183081.b.i.a ENSGT00940000154491.c.b.a ENSGT00390000014303 ENSGT00940000154732.b ENSGT00390000001667 ENSGT00940000159043 Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka MODERN SPECIES 408 ENSOMEG00000020383 ##22 Indian medaka MODERN SPECIES 5 ENSOMEG00000022465 ENSOMEG00000022507 rbm12bb (ENSOMEG00000022523) ENSOMEG00000000597 upp1 (ENSOMEG00000022562) ENSOMEG00000003199 HEY1 (ENSOMEG00000003213) fabp4b (ENSOMEG00000003227) fam8a1b (ENSOMEG00000003243) ATXN1 (ENSOMEG00000003259) ITGA8 (ENSOMEG00000003306) mindy3 (ENSOMEG00000001020) ENSOMEG00000003399 ENSOMEG00000003415 ENSOMEG00000003431 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003595 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003630 ##22 glipr2l (ENSOMEG00000003677) ENSOMEG00000003706 TBRG4 (ENSOMEG00000003748) DENND3 (ENSOMEG00000000085) SLC45A4 (ENSOMEG00000003814) ENSOMEG00000003834 dgat1b (ENSOMEG00000003914) SCRT1 (ENSOMEG00000003925) ino80c (ENSOMEG00000003943) GALNT1 (ENSOMEG00000003970) Indian medaka MODERN SPECIES 5 rbm12bb (ENSOMEG00000022523) ENSOMEG00000000597 upp1 (ENSOMEG00000022562) ENSOMEG00000003199 HEY1 (ENSOMEG00000003213) fabp4b (ENSOMEG00000003227) fam8a1b (ENSOMEG00000003243) ATXN1 (ENSOMEG00000003259) ITGA8 (ENSOMEG00000003306) mindy3 (ENSOMEG00000001020) ENSOMEG00000003399 ENSOMEG00000003415 ENSOMEG00000003431 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003595 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003630 ##22 glipr2l (ENSOMEG00000003677) ENSOMEG00000003706 TBRG4 (ENSOMEG00000003748) DENND3 (ENSOMEG00000000085) SLC45A4 (ENSOMEG00000003814) ENSOMEG00000003834 dgat1b (ENSOMEG00000003914) SCRT1 (ENSOMEG00000003925) ino80c (ENSOMEG00000003943) GALNT1 (ENSOMEG00000003970) ENSOMEG00000003989 ENSOMEG00000004000 Javanese ricefish MODERN SPECIES 7 ENSOJAG00000014609 ENSOJAG00000014629 rbm12bb (ENSOJAG00000014972) ENSOJAG00000014984 upp1 (ENSOJAG00000015027) ENSOJAG00000015283 HEY1 (ENSOJAG00000015290) ENSOJAG00000015299 fam8a1b (ENSOJAG00000015304) ATXN1 (ENSOJAG00000015311) ITGA8 (ENSOJAG00000015372) mindy3 (ENSOJAG00000015620) ENSOJAG00000015752 ENSOJAG00000015761 ENSOJAG00000015775 ##22 ENSOJAG00000015799 ##22 ENSOJAG00000015982 ##22 steap4 (ENSOJAG00000015996) ENSOJAG00000016085 ##22 glipr2l (ENSOJAG00000016091) ENSOJAG00000016101 TBRG4 (ENSOJAG00000016110) ENSOJAG00000016132 SLC45A4 (ENSOJAG00000016627) dgat1b (ENSOJAG00000016755) SCRT1 (ENSOJAG00000017526) ino80c (ENSOJAG00000017534) GALNT1 (ENSOJAG00000017560) TMEM245 (ENSOJAG00000017894) FRRS1L (ENSOJAG00000018307) alg2 (ENSOJAG00000018314) Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a ##22 Oryzias_b DUPLICATION Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000158454 ENSGT00940000165573 ENSGT00940000166273 ENSGT00940000158322.i ENSGT00940000171520 ENSGT00940000157781 ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000020276 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000155784.C.u.a ENSGT00950000182914.a.a.a.c.a ENSGT01040000240444.B.b ENSGT00950000183081.b.i.a ENSGT00940000154491.c.b.a ENSGT00390000014303 ENSGT00940000154732.b ENSGT00390000001667 Indian medaka DUPLICATION Indian medaka MODERN SPECIES 5 NBEAL2 (ENSOMEG00000022442) ENSOMEG00000022465 ENSOMEG00000022507 rbm12bb (ENSOMEG00000022523) ENSOMEG00000000597 upp1 (ENSOMEG00000022562) ENSOMEG00000003199 HEY1 (ENSOMEG00000003213) fabp4b (ENSOMEG00000003227) fam8a1b (ENSOMEG00000003243) ATXN1 (ENSOMEG00000003259) ITGA8 (ENSOMEG00000003306) mindy3 (ENSOMEG00000001020) ENSOMEG00000003399 ENSOMEG00000003415 ENSOMEG00000003431 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003595 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003630 ##22 glipr2l (ENSOMEG00000003677) ENSOMEG00000003706 TBRG4 (ENSOMEG00000003748) DENND3 (ENSOMEG00000000085) SLC45A4 (ENSOMEG00000003814) ENSOMEG00000003834 dgat1b (ENSOMEG00000003914) SCRT1 (ENSOMEG00000003925) ino80c (ENSOMEG00000003943) Indian medaka MODERN SPECIES 5 ENSOMEG00000022507 rbm12bb (ENSOMEG00000022523) ENSOMEG00000000597 upp1 (ENSOMEG00000022562) ENSOMEG00000003199 HEY1 (ENSOMEG00000003213) fabp4b (ENSOMEG00000003227) fam8a1b (ENSOMEG00000003243) ATXN1 (ENSOMEG00000003259) ITGA8 (ENSOMEG00000003306) mindy3 (ENSOMEG00000001020) ENSOMEG00000003399 ENSOMEG00000003415 ENSOMEG00000003431 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003595 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003630 ##22 glipr2l (ENSOMEG00000003677) ENSOMEG00000003706 TBRG4 (ENSOMEG00000003748) DENND3 (ENSOMEG00000000085) SLC45A4 (ENSOMEG00000003814) ENSOMEG00000003834 dgat1b (ENSOMEG00000003914) SCRT1 (ENSOMEG00000003925) ino80c (ENSOMEG00000003943) GALNT1 (ENSOMEG00000003970) ENSOMEG00000003989 Javanese ricefish MODERN SPECIES 7 ccdc12 (ENSOJAG00000013749) ENSOJAG00000014609 ENSOJAG00000014629 rbm12bb (ENSOJAG00000014972) ENSOJAG00000014984 upp1 (ENSOJAG00000015027) ENSOJAG00000015283 HEY1 (ENSOJAG00000015290) ENSOJAG00000015299 fam8a1b (ENSOJAG00000015304) ATXN1 (ENSOJAG00000015311) ITGA8 (ENSOJAG00000015372) mindy3 (ENSOJAG00000015620) ENSOJAG00000015752 ENSOJAG00000015761 ENSOJAG00000015775 ##22 ENSOJAG00000015799 ##22 ENSOJAG00000015982 ##22 steap4 (ENSOJAG00000015996) ENSOJAG00000016085 ##22 glipr2l (ENSOJAG00000016091) ENSOJAG00000016101 TBRG4 (ENSOJAG00000016110) ENSOJAG00000016132 SLC45A4 (ENSOJAG00000016627) dgat1b (ENSOJAG00000016755) SCRT1 (ENSOJAG00000017526) ino80c (ENSOJAG00000017534) GALNT1 (ENSOJAG00000017560) TMEM245 (ENSOJAG00000017894) FRRS1L (ENSOJAG00000018307) Oryzias_b ANCESTRAL SPECIES 1 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.a ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Javanese ricefish MODERN SPECIES 7 sec61b (ENSOJAG00000018323) alg2 (ENSOJAG00000018314) FRRS1L (ENSOJAG00000018307) TMEM245 (ENSOJAG00000017894) GALNT1 (ENSOJAG00000017560) ino80c (ENSOJAG00000017534) SCRT1 (ENSOJAG00000017526) dgat1b (ENSOJAG00000016755) SLC45A4 (ENSOJAG00000016627) ENSOJAG00000016132 TBRG4 (ENSOJAG00000016110) ENSOJAG00000016101 glipr2l (ENSOJAG00000016091) ENSOJAG00000016085 ##22 steap4 (ENSOJAG00000015996) ENSOJAG00000015982 ##22 ENSOJAG00000015799 ##22 ENSOJAG00000015775 ##22 ENSOJAG00000015761 ENSOJAG00000015752 mindy3 (ENSOJAG00000015620) ITGA8 (ENSOJAG00000015372) ATXN1 (ENSOJAG00000015311) fam8a1b (ENSOJAG00000015304) ENSOJAG00000015299 HEY1 (ENSOJAG00000015290) ENSOJAG00000015283 upp1 (ENSOJAG00000015027) ENSOJAG00000014984 rbm12bb (ENSOJAG00000014972) ENSOJAG00000014629 Indian medaka MODERN SPECIES 5 FRRS1L (ENSOMEG00000004012) ENSOMEG00000004000 ENSOMEG00000003989 GALNT1 (ENSOMEG00000003970) ino80c (ENSOMEG00000003943) SCRT1 (ENSOMEG00000003925) dgat1b (ENSOMEG00000003914) ENSOMEG00000003834 SLC45A4 (ENSOMEG00000003814) DENND3 (ENSOMEG00000000085) TBRG4 (ENSOMEG00000003748) ENSOMEG00000003706 glipr2l (ENSOMEG00000003677) ENSOMEG00000003630 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003595 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003431 ##22 ENSOMEG00000003415 ENSOMEG00000003399 mindy3 (ENSOMEG00000001020) ITGA8 (ENSOMEG00000003306) ATXN1 (ENSOMEG00000003259) fam8a1b (ENSOMEG00000003243) fabp4b (ENSOMEG00000003227) HEY1 (ENSOMEG00000003213) ENSOMEG00000003199 upp1 (ENSOMEG00000022562) ENSOMEG00000000597 Oryzias_a ANCESTRAL SPECIES 9 ENSGT00940000158322.i ENSGT00940000171520 ENSGT00940000157781 ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a ##22 ENSGT00390000020276.u ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000155784.C.u.a ENSGT00950000182914.a.a.a.c.a ENSGT01040000240444.B.b ENSGT00950000183081.b.i.a ENSGT00940000154491.c.b.a ENSGT00390000014303 ENSGT00940000154732.b ENSGT00390000001667 ENSGT00940000159043 ENSGT00550000075033 ENSGT00390000003561 ENSGT00950000183038.a.b.b.a Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000008268 fabp4b (ENSORLG00000008282) ENSORLG00000027307 fam8a1b (ENSORLG00000023567) ATXN1 (ENSORLG00000008288) ITGA8 (ENSORLG00000008330) ENSORLG00000024473 mindy3 (ENSORLG00000008352) ENSORLG00000008362 ENSORLG00000029148 ENSORLG00000028543 ##22 ENSORLG00000008373 ENSORLG00000008394 ##22 ENSORLG00000027565 ##22 steap4 (ENSORLG00000008484) ENSORLG00000030212 ##22 glipr2l (ENSORLG00000008495) ENSORLG00000029826 TBRG4 (ENSORLG00000008558) ENSORLG00000008599 ENSORLG00000008614 ENSORLG00000022980 dgat1b (ENSORLG00000008631) ENSORLG00000025651 ENSORLG00000025955 GALNT1 (ENSORLG00000008696) ino80c (ENSORLG00000008652) TMEM245 (ENSORLG00000008707) FRRS1L (ENSORLG00000008710) alg2 (ENSORLG00000008717) sec61b (ENSORLG00000021833) Chinese medaka MODERN SPECIES 493 ENSOSIG00000007702 upp1 (ENSOSIG00000007704) ENSOSIG00000007708 HEY1 (ENSOSIG00000007959) fabp4b (ENSOSIG00000007961) fam8a1b (ENSOSIG00000008079) ATXN1 (ENSOSIG00000008122) ITGA8 (ENSOSIG00000008123) mindy3 (ENSOSIG00000008130) ENSOSIG00000008148 ENSOSIG00000008151 glipr2l (ENSOSIG00000008153) ENSOSIG00000008155 ##22 ENSOSIG00000008156 ##22 steap4 (ENSOSIG00000008161) ENSOSIG00000008165 ##22 ENSOSIG00000008169 TBRG4 (ENSOSIG00000008175) ENSOSIG00000008177 SLC45A4 (ENSOSIG00000008184) dgat1b (ENSOSIG00000008210) SCRT1 (ENSOSIG00000008213) ino80c (ENSOSIG00000008214) GALNT1 (ENSOSIG00000008218) ENSOSIG00000008271 FRRS1L (ENSOSIG00000008272) alg2 (ENSOSIG00000008273) sec61b (ENSOSIG00000008275) nr4a3 (ENSOSIG00000008276) ENSOSIG00000008277 stx17 (ENSOSIG00000008278) Oryzias ANCESTRAL SPECIES 2 ENSGT00950000183038.a.b.b.a ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 ENSGT00940000158454 Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000171520 ENSGT00940000157781 ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156737 ENSGT00940000155958 ENSGT00410000028469 ENSGT00940000160479 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a.b ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT00390000020276 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000155784.C.u.a ENSGT00950000182914.a.a.a.c.a ENSGT01040000240444.B.b ENSGT00950000183081.b.i.a ENSGT00940000154491.c.b.a ENSGT00390000014303 ENSGT00940000154732.b ENSGT00390000001667 ENSGT00940000159043 ENSGT00550000075033 ENSGT00390000003561 ENSGT00950000183038.a.b.b.a Javanese ricefish MODERN SPECIES 7 ENSOJAG00000014984 upp1 (ENSOJAG00000015027) ENSOJAG00000015283 HEY1 (ENSOJAG00000015290) ENSOJAG00000015299 fam8a1b (ENSOJAG00000015304) ATXN1 (ENSOJAG00000015311) ITGA8 (ENSOJAG00000015372) mindy3 (ENSOJAG00000015620) ENSOJAG00000015752 ENSOJAG00000015761 ENSOJAG00000015775 ##22 ENSOJAG00000015799 ##22 ENSOJAG00000015982 ##22 steap4 (ENSOJAG00000015996) ENSOJAG00000016085 ##22 glipr2l (ENSOJAG00000016091) ENSOJAG00000016101 TBRG4 (ENSOJAG00000016110) ENSOJAG00000016132 SLC45A4 (ENSOJAG00000016627) dgat1b (ENSOJAG00000016755) SCRT1 (ENSOJAG00000017526) ino80c (ENSOJAG00000017534) GALNT1 (ENSOJAG00000017560) TMEM245 (ENSOJAG00000017894) FRRS1L (ENSOJAG00000018307) alg2 (ENSOJAG00000018314) sec61b (ENSOJAG00000018323) nr4a3 (ENSOJAG00000018329) stx17 (ENSOJAG00000018343) Indian medaka MODERN SPECIES 5 ENSOMEG00000003199 HEY1 (ENSOMEG00000003213) fabp4b (ENSOMEG00000003227) fam8a1b (ENSOMEG00000003243) ATXN1 (ENSOMEG00000003259) ITGA8 (ENSOMEG00000003306) mindy3 (ENSOMEG00000001020) ENSOMEG00000003399 ENSOMEG00000003415 ENSOMEG00000003431 ##22 ENSOMEG00000003507 ##22 ENSOMEG00000003548 ##22 ENSOMEG00000003576 ##22 ENSOMEG00000003595 ##22 steap4 (ENSOMEG00000003615) ENSOMEG00000003630 ##22 glipr2l (ENSOMEG00000003677) ENSOMEG00000003706 TBRG4 (ENSOMEG00000003748) DENND3 (ENSOMEG00000000085) SLC45A4 (ENSOMEG00000003814) ENSOMEG00000003834 dgat1b (ENSOMEG00000003914) SCRT1 (ENSOMEG00000003925) ino80c (ENSOMEG00000003943) GALNT1 (ENSOMEG00000003970) ENSOMEG00000003989 ENSOMEG00000004000 FRRS1L (ENSOMEG00000004012) alg2 (ENSOMEG00000004027) ENSOMEG00000004043 Oryzias_a ANCESTRAL SPECIES 9 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276.u ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.a ##22 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.h.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b.g.a ##22 ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Japanese Medaka HdrR MODERN SPECIES 7 FRRS1L (ENSORLG00000008710) TMEM245 (ENSORLG00000008707) ino80c (ENSORLG00000008652) GALNT1 (ENSORLG00000008696) ENSORLG00000025955 ENSORLG00000025651 dgat1b (ENSORLG00000008631) ENSORLG00000022980 ENSORLG00000008614 ENSORLG00000008599 TBRG4 (ENSORLG00000008558) ENSORLG00000029826 glipr2l (ENSORLG00000008495) ENSORLG00000030212 ##22 steap4 (ENSORLG00000008484) ENSORLG00000027565 ##22 ENSORLG00000008394 ##22 ENSORLG00000008373 ENSORLG00000028543 ##22 ENSORLG00000029148 ENSORLG00000008362 mindy3 (ENSORLG00000008352) ENSORLG00000024473 ITGA8 (ENSORLG00000008330) ATXN1 (ENSORLG00000008288) fam8a1b (ENSORLG00000023567) ENSORLG00000027307 fabp4b (ENSORLG00000008282) ENSORLG00000008268 ENSORLG00000008251 upp1 (ENSORLG00000008240) Chinese medaka MODERN SPECIES 493 nr4a3 (ENSOSIG00000008276) sec61b (ENSOSIG00000008275) alg2 (ENSOSIG00000008273) FRRS1L (ENSOSIG00000008272) ENSOSIG00000008271 GALNT1 (ENSOSIG00000008218) ino80c (ENSOSIG00000008214) SCRT1 (ENSOSIG00000008213) dgat1b (ENSOSIG00000008210) SLC45A4 (ENSOSIG00000008184) ENSOSIG00000008177 TBRG4 (ENSOSIG00000008175) ENSOSIG00000008169 ENSOSIG00000008165 ##22 steap4 (ENSOSIG00000008161) ENSOSIG00000008156 ##22 ENSOSIG00000008155 ##22 glipr2l (ENSOSIG00000008153) ENSOSIG00000008151 ENSOSIG00000008148 mindy3 (ENSOSIG00000008130) ITGA8 (ENSOSIG00000008123) ATXN1 (ENSOSIG00000008122) fam8a1b (ENSOSIG00000008079) fabp4b (ENSOSIG00000007961) HEY1 (ENSOSIG00000007959) ENSOSIG00000007708 upp1 (ENSOSIG00000007704) ENSOSIG00000007702 rbm12bb (ENSOSIG00000007701) ENSOSIG00000007225 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Aplocheiloidei ANCESTRAL SPECIES 2 ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000158322.i ENSGT00940000166273 ENSGT00940000165573 Mangrove rivulus DUPLICATION Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 81 FRRS1L (ENSKMAG00000005259) TMEM245 (ENSKMAG00000005289) GALNT1 (ENSKMAG00000005399) ino80c (ENSKMAG00000005456) SCRT1 (ENSKMAG00000005484) ENSKMAG00000005493 dgat1b (ENSKMAG00000005574) GPR20 (ENSKMAG00000005633) SLC45A4 (ENSKMAG00000005651) DENND3 (ENSKMAG00000005678) TBRG4 (ENSKMAG00000005739) ENSKMAG00000005765 glipr2l (ENSKMAG00000005792) steap4 (ENSKMAG00000005820) ENSKMAG00000005846 ##22 ENSKMAG00000005859 ##22 ENSKMAG00000005874 ##22 ENSKMAG00000005884 ##22 Mangrove rivulus MODERN SPECIES 81 TMEM245 (ENSKMAG00000005289) GALNT1 (ENSKMAG00000005399) ino80c (ENSKMAG00000005456) SCRT1 (ENSKMAG00000005484) ENSKMAG00000005493 dgat1b (ENSKMAG00000005574) GPR20 (ENSKMAG00000005633) SLC45A4 (ENSKMAG00000005651) DENND3 (ENSKMAG00000005678) TBRG4 (ENSKMAG00000005739) ENSKMAG00000005765 glipr2l (ENSKMAG00000005792) steap4 (ENSKMAG00000005820) ENSKMAG00000005846 ##22 ENSKMAG00000005859 ##22 ENSKMAG00000005874 ##22 ENSKMAG00000005884 ##22 Mangrove rivulus MODERN SPECIES 81 ENSKMAG00000005230 FRRS1L (ENSKMAG00000005259) TMEM245 (ENSKMAG00000005289) GALNT1 (ENSKMAG00000005399) ino80c (ENSKMAG00000005456) SCRT1 (ENSKMAG00000005484) ENSKMAG00000005493 dgat1b (ENSKMAG00000005574) GPR20 (ENSKMAG00000005633) SLC45A4 (ENSKMAG00000005651) DENND3 (ENSKMAG00000005678) TBRG4 (ENSKMAG00000005739) ENSKMAG00000005765 glipr2l (ENSKMAG00000005792) steap4 (ENSKMAG00000005820) ENSKMAG00000005846 ##22 ENSKMAG00000005859 ##22 ENSKMAG00000005874 ##22 ENSKMAG00000005884 ##22 Turquoise killifish MODERN SPECIES 1614 TMEM200B (ENSNFUG00015015008) ENSNFUG00015015019 ENSNFUG00015015061 ENSNFUG00015015640 ##12 FAM171A1 (ENSNFUG00015015689) NMT2 (ENSNFUG00015015721) RPP38 (ENSNFUG00015015767) acbd7 (ENSNFUG00015015813) CROT (ENSNFUG00015016326) abcb4 (ENSNFUG00015016384) RUNDC3B (ENSNFUG00015016790) ENSNFUG00015017147 GLIPR2L (ENSNFUG00015017157) steap4 (ENSNFUG00015017177) ENSNFUG00015017407 Nfu_g_1_001221 (ENSNFUG00015017418) ##22 ENSNFUG00015017429 OLA.3322 (ENSNFUG00015017440) mindy3 (ENSNFUG00015017470) ENSNFUG00015017510 CABZ01072585.1 (ENSNFUG00015017515) ENSNFUG00015008387 ENSNFUG00015008389 ENSNFUG00015008396 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i NAME_4 ANCESTRAL SPECIES 1 ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01030000237748 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Mummichog DUPLICATION Mummichog MODERN SPECIES 292 alg2 (ENSFHEG00000014605) FRRS1L (ENSFHEG00000014619) TMEM245 (ENSFHEG00000014765) GALNT1 (ENSFHEG00000014794) ino80c (ENSFHEG00000014801) ENSFHEG00000000357 SCRT1 (ENSFHEG00000014820) ENSFHEG00000014827 dgat1b (ENSFHEG00000014868) SLC45A4 (ENSFHEG00000014891) DENND3 (ENSFHEG00000014932) TBRG4 (ENSFHEG00000014946) ENSFHEG00000014965 glipr2l (ENSFHEG00000014990) steap4 (ENSFHEG00000014996) ENSFHEG00000015001 ##22 ENSFHEG00000015021 ##22 ENSFHEG00000015046 Mummichog MODERN SPECIES 292 FRRS1L (ENSFHEG00000014619) TMEM245 (ENSFHEG00000014765) GALNT1 (ENSFHEG00000014794) ino80c (ENSFHEG00000014801) ENSFHEG00000000357 SCRT1 (ENSFHEG00000014820) ENSFHEG00000014827 dgat1b (ENSFHEG00000014868) SLC45A4 (ENSFHEG00000014891) DENND3 (ENSFHEG00000014932) TBRG4 (ENSFHEG00000014946) ENSFHEG00000014965 glipr2l (ENSFHEG00000014990) steap4 (ENSFHEG00000014996) ENSFHEG00000015001 ##22 ENSFHEG00000015021 ##22 ENSFHEG00000015046 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 114 sec61b (ENSCVAG00000000880) alg2 (ENSCVAG00000009392) FRRS1L (ENSCVAG00000009416) TMEM245 (ENSCVAG00000009489) GALNT1 (ENSCVAG00000009543) ino80c (ENSCVAG00000009552) SCRT1 (ENSCVAG00000009561) dgat1b (ENSCVAG00000009576) ENSCVAG00000009644 SLC45A4 (ENSCVAG00000009659) DENND3 (ENSCVAG00000009851) TBRG4 (ENSCVAG00000009862) ENSCVAG00000009889 glipr2l (ENSCVAG00000009900) steap4 (ENSCVAG00000009911) ENSCVAG00000010017 ##22 ENSCVAG00000010051 ##22 ENSCVAG00000010471 ##22 ENSCVAG00000000289 ##22 steap4 (ENSCVAG00000000992) ENSCVAG00000010615 mindy3 (ENSCVAG00000010690) ITGA8 (ENSCVAG00000010937) ATXN1 (ENSCVAG00000010945) fabp4b (ENSCVAG00000010949) fam8a1b (ENSCVAG00000010989) HEY1 (ENSCVAG00000011007) stmn2b (ENSCVAG00000011029) upp1 (ENSCVAG00000011036) ENSCVAG00000011040 rbm12bb (ENSCVAG00000011047) Sheepshead minnow MODERN SPECIES 114 ENSCVAG00000011061 rbm12bb (ENSCVAG00000011047) ENSCVAG00000011040 upp1 (ENSCVAG00000011036) stmn2b (ENSCVAG00000011029) HEY1 (ENSCVAG00000011007) fam8a1b (ENSCVAG00000010989) fabp4b (ENSCVAG00000010949) ATXN1 (ENSCVAG00000010945) ITGA8 (ENSCVAG00000010937) mindy3 (ENSCVAG00000010690) ENSCVAG00000010615 steap4 (ENSCVAG00000000992) ENSCVAG00000000289 ##22 ENSCVAG00000010471 ##22 ENSCVAG00000010051 ##22 ENSCVAG00000010017 ##22 steap4 (ENSCVAG00000009911) glipr2l (ENSCVAG00000009900) ENSCVAG00000009889 TBRG4 (ENSCVAG00000009862) DENND3 (ENSCVAG00000009851) SLC45A4 (ENSCVAG00000009659) ENSCVAG00000009644 dgat1b (ENSCVAG00000009576) SCRT1 (ENSCVAG00000009561) ino80c (ENSCVAG00000009552) GALNT1 (ENSCVAG00000009543) TMEM245 (ENSCVAG00000009489) FRRS1L (ENSCVAG00000009416) alg2 (ENSCVAG00000009392) Poeciliinae ANCESTRAL SPECIES ENSGT00550000075033 ENSGT00940000178343 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Poecilia ANCESTRAL SPECIES ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.d.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b.i ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Guppy DUPLICATION Guppy MODERN SPECIES 446 ENSPREG00000018767 alg2 (ENSPREG00000018776) FRRS1L (ENSPREG00000018789) TMEM245 (ENSPREG00000018856) ENSPREG00000018944 ino80c (ENSPREG00000018970) SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) Guppy MODERN SPECIES 446 alg2 (ENSPREG00000018776) FRRS1L (ENSPREG00000018789) TMEM245 (ENSPREG00000018856) ENSPREG00000018944 ino80c (ENSPREG00000018970) SCRT1 (ENSPREG00000018985) dgat1b (ENSPREG00000019007) GPR20 (ENSPREG00000019042) SLC45A4 (ENSPREG00000019069) DENND3 (ENSPREG00000019116) TBRG4 (ENSPREG00000019178) ENSPREG00000019222 glipr2l (ENSPREG00000019236) steap4 (ENSPREG00000019257) ENSPREG00000019346 ##22 ENSPREG00000019392 ##22 ENSPREG00000019432 ENSPREG00000019447 ##22 ENSPREG00000019487 ##22 ENSPREG00000019636 ##22 ENSPREG00000019722 ##22 steap4 (ENSPREG00000019734) ENSPREG00000019753 ##22 ENSPREG00000019856 mindy3 (ENSPREG00000019880) ITGA8 (ENSPREG00000019979) ATXN1 (ENSPREG00000020308) fam8a1b (ENSPREG00000020323) fabp4b (ENSPREG00000020345) HEY1 (ENSPREG00000020452) ENSPREG00000020496 NAME_6 ANCESTRAL SPECIES 36 ENSGT00390000003561 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.c.a ##22 ENSGT00390000008042.B.r.b ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 328 sec61b (ENSPFOG00000017564) alg2 (ENSPFOG00000017567) FRRS1L (ENSPFOG00000017578) TMEM245 (ENSPFOG00000017604) GALNT1 (ENSPFOG00000017686) ino80c (ENSPFOG00000017709) SCRT1 (ENSPFOG00000017719) dgat1b (ENSPFOG00000017725) GPR20 (ENSPFOG00000017772) SLC45A4 (ENSPFOG00000017796) DENND3 (ENSPFOG00000017821) TBRG4 (ENSPFOG00000017918) ENSPFOG00000017937 glipr2l (ENSPFOG00000017944) steap4 (ENSPFOG00000017956) ENSPFOG00000018004 ##22 ENSPFOG00000018011 ##22 ENSPFOG00000018024 ##22 steap4 (ENSPFOG00000018027) Amazon molly MODERN SPECIES 328 alg2 (ENSPFOG00000017567) FRRS1L (ENSPFOG00000017578) TMEM245 (ENSPFOG00000017604) GALNT1 (ENSPFOG00000017686) ino80c (ENSPFOG00000017709) SCRT1 (ENSPFOG00000017719) dgat1b (ENSPFOG00000017725) GPR20 (ENSPFOG00000017772) SLC45A4 (ENSPFOG00000017796) DENND3 (ENSPFOG00000017821) TBRG4 (ENSPFOG00000017918) ENSPFOG00000017937 glipr2l (ENSPFOG00000017944) steap4 (ENSPFOG00000017956) ENSPFOG00000018004 ##22 ENSPFOG00000018011 ##22 ENSPFOG00000018024 ##22 steap4 (ENSPFOG00000018027) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 11 sec61b (ENSPLAG00000010062) alg2 (ENSPLAG00000010053) FRRS1L (ENSPLAG00000010042) TMEM245 (ENSPLAG00000010020) GALNT1 (ENSPLAG00000009951) ino80c (ENSPLAG00000009882) SCRT1 (ENSPLAG00000009876) dgat1b (ENSPLAG00000009865) GPR20 (ENSPLAG00000009856) SLC45A4 (ENSPLAG00000009797) DENND3 (ENSPLAG00000009782) TBRG4 (ENSPLAG00000009771) ENSPLAG00000009762 glipr2l (ENSPLAG00000000219) steap4 (ENSPLAG00000009729) ENSPLAG00000009702 ##22 ENSPLAG00000009640 ##22 ENSPLAG00000009626 ##22 steap4 (ENSPLAG00000009564) Sailfin molly MODERN SPECIES 11 alg2 (ENSPLAG00000010053) FRRS1L (ENSPLAG00000010042) TMEM245 (ENSPLAG00000010020) GALNT1 (ENSPLAG00000009951) ino80c (ENSPLAG00000009882) SCRT1 (ENSPLAG00000009876) dgat1b (ENSPLAG00000009865) GPR20 (ENSPLAG00000009856) SLC45A4 (ENSPLAG00000009797) DENND3 (ENSPLAG00000009782) TBRG4 (ENSPLAG00000009771) ENSPLAG00000009762 glipr2l (ENSPLAG00000000219) steap4 (ENSPLAG00000009729) ENSPLAG00000009702 ##22 ENSPLAG00000009640 ##22 ENSPLAG00000009626 ##22 steap4 (ENSPLAG00000009564) Platyfish DUPLICATION Platyfish MODERN SPECIES 17 FRRS1L (ENSXMAG00000029956) TMEM245 (ENSXMAG00000013207) GALNT1 (ENSXMAG00000013208) ENSXMAG00000029943 ino80c (ENSXMAG00000014496) SCRT1 (ENSXMAG00000027885) dgat1b (ENSXMAG00000014477) ENSXMAG00000014474 SLC45A4 (ENSXMAG00000014455) DENND3 (ENSXMAG00000014446) TBRG4 (ENSXMAG00000014438) ENSXMAG00000021824 glipr2l (ENSXMAG00000014422) ENSXMAG00000026561 steap4 (ENSXMAG00000024455) ENSXMAG00000028644 ##22 ENSXMAG00000030018 ##22 ENSXMAG00000023957 ##22 ENSXMAG00000025691 ##22 steap4 (ENSXMAG00000014397) ENSXMAG00000026284 ENSXMAG00000025877 mindy3 (ENSXMAG00000014375) ITGA8 (ENSXMAG00000014274) ATXN1 (ENSXMAG00000014270) fam8a1b (ENSXMAG00000026154) ENSXMAG00000014247 HEY1 (ENSXMAG00000014241) ENSXMAG00000025692 upp1 (ENSXMAG00000014219) ENSXMAG00000021038 Platyfish MODERN SPECIES 17 TMEM245 (ENSXMAG00000013207) GALNT1 (ENSXMAG00000013208) ENSXMAG00000029943 ino80c (ENSXMAG00000014496) SCRT1 (ENSXMAG00000027885) dgat1b (ENSXMAG00000014477) ENSXMAG00000014474 SLC45A4 (ENSXMAG00000014455) DENND3 (ENSXMAG00000014446) TBRG4 (ENSXMAG00000014438) ENSXMAG00000021824 glipr2l (ENSXMAG00000014422) ENSXMAG00000026561 steap4 (ENSXMAG00000024455) ENSXMAG00000028644 ##22 ENSXMAG00000030018 ##22 ENSXMAG00000023957 ##22 ENSXMAG00000025691 ##22 steap4 (ENSXMAG00000014397) ENSXMAG00000026284 ENSXMAG00000025877 mindy3 (ENSXMAG00000014375) ITGA8 (ENSXMAG00000014274) ATXN1 (ENSXMAG00000014270) fam8a1b (ENSXMAG00000026154) ENSXMAG00000014247 HEY1 (ENSXMAG00000014241) ENSXMAG00000025692 upp1 (ENSXMAG00000014219) ENSXMAG00000021038 rbm12bb (ENSXMAG00000014213) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Cichlidae ANCESTRAL SPECIES 9 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.b ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Haplochromini ANCESTRAL SPECIES 6 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Haplochromini_A ANCESTRAL SPECIES 18 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Haplochromini_B ANCESTRAL SPECIES 6 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276.`b ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT01030000237748 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 Eastern happy MODERN SPECIES 2 alg2 (ENSACLG00000007433) FRRS1L (ENSACLG00000007429) TMEM245 (ENSACLG00000007372) GALNT1 (ENSACLG00000007261) ino80c (ENSACLG00000007245) SCRT1 (ENSACLG00000007162) dgat1b (ENSACLG00000007146) ENSACLG00000007137 ENSACLG00000007112 ENSACLG00000006600 ATP4A (ENSACLG00000006550) ENSACLG00000006544 ENSACLG00000006531 glipr2l (ENSACLG00000006517) steap4 (ENSACLG00000006504) ENSACLG00000006493 ##22 ENSACLG00000006484 ##22 ENSACLG00000006478 ##22 ENSACLG00000006471 ENSACLG00000006459 steap4 (ENSACLG00000006447) ENSACLG00000006443 ENSACLG00000006430 mindy3 (ENSACLG00000006399) ITGA8 (ENSACLG00000005710) ATXN1 (ENSACLG00000005697) fam8a1b (ENSACLG00000005678) fabp4b (ENSACLG00000005673) HEY1 (ENSACLG00000005650) ENSACLG00000005632 upp1 (ENSACLG00000005619) Zebra mbuna MODERN SPECIES 1093 tmem107 (ENSMZEG00005015423) TRIM46 (ENSMZEG00005015402) slc50a1 (ENSMZEG00005015388) efna1b (ENSMZEG00005015381) efna3b (ENSMZEG00005015372) ENSMZEG00005015365 dgat1b (ENSMZEG00005015343) ENSMZEG00005015274 SLC45A4 (ENSMZEG00005015260) DENND3 (ENSMZEG00005015234) ATP4A (ENSMZEG00005015199) ENSMZEG00005015189 ENSMZEG00005015184 glipr2l (ENSMZEG00005015177) steap4 (ENSMZEG00005015173) ENSMZEG00005015166 ##22 ENSMZEG00005015161 ##22 ENSMZEG00005015150 ##22 ENSMZEG00005015140 steap4 (ENSMZEG00005015128) ENSMZEG00005015123 ENSMZEG00005015112 mindy3 (ENSMZEG00005015089) ITGA8 (ENSMZEG00005015070) ATXN1 (ENSMZEG00005015064) fam8a1b (ENSMZEG00005015056) fabp4b (ENSMZEG00005015051) HEY1 (ENSMZEG00005015039) ENSMZEG00005015026 upp1 (ENSMZEG00005015019) ENSMZEG00005015013 Burton s mouthbrooder MODERN SPECIES 498 FRRS1L (ENSHBUG00000016355) TMEM245 (ENSHBUG00000016495) GALNT1 (ENSHBUG00000000985) ino80c (ENSHBUG00000000491) SCRT1 (ENSHBUG00000016621) dgat1b (ENSHBUG00000016634) GPR20 (ENSHBUG00000016670) SLC45A4 (ENSHBUG00000016735) ENSHBUG00000016763 ENSHBUG00000016770 ATP4A (ENSHBUG00000016838) ENSHBUG00000016854 ENSHBUG00000016872 glipr2l (ENSHBUG00000016906) steap4 (ENSHBUG00000016921) ENSHBUG00000016958 ##22 ENSHBUG00000017001 ##22 ENSHBUG00000017058 ##22 Lyretail cichlid MODERN SPECIES 369 FRRS1L (ENSNBRG00000013851) TMEM245 (ENSNBRG00000013874) GALNT1 (ENSNBRG00000013924) ino80c (ENSNBRG00000013978) SCRT1 (ENSNBRG00000013983) dgat1b (ENSNBRG00000013998) ENSNBRG00000014075 GPR20 (ENSNBRG00000014102) SLC45A4 (ENSNBRG00000014121) DENND3 (ENSNBRG00000014161) ATP4A (ENSNBRG00000014229) ENSNBRG00000014277 ENSNBRG00000014287 glipr2l (ENSNBRG00000014308) steap4 (ENSNBRG00000014328) ENSNBRG00000014342 ##22 ENSNBRG00000014409 ##22 ENSNBRG00000014417 ##22 ENSNBRG00000014439 ##22 steap4 (ENSNBRG00000014533) ENSNBRG00000014646 mindy3 (ENSNBRG00000014659) ITGA8 (ENSNBRG00000014692) ATXN1 (ENSNBRG00000014776) fam8a1b (ENSNBRG00000014794) fabp4b (ENSNBRG00000014819) HEY1 (ENSNBRG00000014983) ENSNBRG00000015005 upp1 (ENSNBRG00000015020) ENSNBRG00000015041 rbm12bb (ENSNBRG00000015057) Nile tilapia MODERN SPECIES 2 FRRS1L (ENSONIG00000006022) TMEM245 (ENSONIG00000006020) GALNT1 (ENSONIG00000006013) ino80c (ENSONIG00000006010) SCRT1 (ENSONIG00000006007) ENSONIG00000033292 dgat1b (ENSONIG00000006003) ENSONIG00000005999 SLC45A4 (ENSONIG00000005996) DENND3 (ENSONIG00000005993) ATP4A (ENSONIG00000005974) ENSONIG00000005969 ENSONIG00000033464 glipr2l (ENSONIG00000005963) steap4 (ENSONIG00000005957) ENSONIG00000005955 ##22 ENSONIG00000037297 ##22 ENSONIG00000005953 ##22 ENSONIG00000036973 ##22 ENSONIG00000042849 ##22 steap4 (ENSONIG00000033697) ENSONIG00000040814 ENSONIG00000003126 mindy3 (ENSONIG00000003121) ENSONIG00000003095 ATXN1 (ENSONIG00000003094) fam8a1b (ENSONIG00000003093) fabp4b (ENSONIG00000003090) HEY1 (ENSONIG00000003087) ENSONIG00000003084 upp1 (ENSONIG00000003081) Midas cichlid MODERN SPECIES 303 alg2 (ENSACIG00000013502) FRRS1L (ENSACIG00000013516) TMEM245 (ENSACIG00000013532) GALNT1 (ENSACIG00000013565) ino80c (ENSACIG00000013594) SCRT1 (ENSACIG00000013613) dgat1b (ENSACIG00000013626) ENSACIG00000013673 SLC45A4 (ENSACIG00000013704) DENND3 (ENSACIG00000013765) ATP4A (ENSACIG00000013867) TBRG4 (ENSACIG00000013917) ENSACIG00000014027 glipr2l (ENSACIG00000014042) steap4 (ENSACIG00000014067) ENSACIG00000014169 ##22 ENSACIG00000014240 ##22 ENSACIG00000014294 ##22 ENSACIG00000014336 ##22 ENSACIG00000014380 steap4 (ENSACIG00000014398) ENSACIG00000014432 mindy3 (ENSACIG00000014511) ITGA8 (ENSACIG00000014542) ATXN1 (ENSACIG00000014661) fam8a1b (ENSACIG00000014675) ENSACIG00000014715 HEY1 (ENSACIG00000014891) ENSACIG00000014909 upp1 (ENSACIG00000014925) rbm12bb (ENSACIG00000014943) Pomacentridae ANCESTRAL SPECIES 18 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i ENSGT00940000166273 Amphiprion ANCESTRAL SPECIES 1 ENSGT00550000075033 ENSGT00940000159043 ENSGT00390000001667 ENSGT00940000154732.b ENSGT00390000014303 ENSGT00940000154491.c.b.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b ENSGT00950000182914.a.a.a.c.a ENSGT00940000155784.C.u.a ENSGT00940000160297 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000020276 ENSGT00390000008042.B.q ENSGT01100000263515.a.b.a.b.b.k.a.a.b.b ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.l ##22 ENSGT01100000263515.a.b.a.b.b.k.a.a.b.a.a.a.a.k ##22 ENSGT00390000008042.B.r ENSGT00940000160479 ENSGT00410000028469 ENSGT00940000155958 ENSGT00940000156737 ENSGT00390000005939.a.a.b ENSGT00390000007346.a ENSGT00940000164547.b.b ENSGT00940000157068.d ENSGT01030000234597.a.b.b.e.b.e ENSGT00940000157781 ENSGT00940000171520 ENSGT00940000158322.i Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1347 ino80c (ENSAOCG00000003907) SCRT1 (ENSAOCG00000003910) dgat1b (ENSAOCG00000003933) GPR20 (ENSAOCG00000003950) SLC45A4 (ENSAOCG00000003972) DENND3 (ENSAOCG00000003995) ATP4A (ENSAOCG00000004011) ENSAOCG00000000120 ENSAOCG00000004020 glipr2l (ENSAOCG00000004026) steap4 (ENSAOCG00000004052) ENSAOCG00000004086 ##22 ENSAOCG00000004111 ##22 ENSAOCG00000004128 ##22 ENSAOCG00000004133 ##22 steap4 (ENSAOCG00000004145) NELL2 (ENSAOCG00000004181) ENSAOCG00000004203 szl (ENSAOCG00000004219) prl2 (ENSAOCG00000004241) ENSAOCG00000004267 NUAK1 (ENSAOCG00000004289) Clown anemonefish MODERN SPECIES 1347 ino80c (ENSAOCG00000003907) SCRT1 (ENSAOCG00000003910) dgat1b (ENSAOCG00000003933) GPR20 (ENSAOCG00000003950) SLC45A4 (ENSAOCG00000003972) DENND3 (ENSAOCG00000003995) ATP4A (ENSAOCG00000004011) ENSAOCG00000000120 ENSAOCG00000004020 glipr2l (ENSAOCG00000004026) steap4 (ENSAOCG00000004052) ENSAOCG00000004086 ##22 ENSAOCG00000004111 ##22 ENSAOCG00000004128 ##22 ENSAOCG00000004133 ##22 steap4 (ENSAOCG00000004145) NELL2 (ENSAOCG00000004181) ENSAOCG00000004203 szl (ENSAOCG00000004219) prl2 (ENSAOCG00000004241) ENSAOCG00000004267 NUAK1 (ENSAOCG00000004289) Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 21 alg2 (ENSAPEG00000001063) FRRS1L (ENSAPEG00000001051) TMEM245 (ENSAPEG00000000973) GALNT1 (ENSAPEG00000000920) ino80c (ENSAPEG00000000884) SCRT1 (ENSAPEG00000000869) dgat1b (ENSAPEG00000000792) GPR20 (ENSAPEG00000000743) SLC45A4 (ENSAPEG00000000692) DENND3 (ENSAPEG00000000517) ATP4A (ENSAPEG00000000426) TBRG4 (ENSAPEG00000000413) ENSAPEG00000000405 glipr2l (ENSAPEG00000000368) steap4 (ENSAPEG00000000361) ENSAPEG00000000354 ##22 ENSAPEG00000000324 ##22 ENSAPEG00000022811 ##22 ENSAPEG00000022772 ##22 steap4 (ENSAPEG00000022725) ENSAPEG00000022714 ENSAPEG00000022694 mindy3 (ENSAPEG00000022645) ITGA8 (ENSAPEG00000022470) ATXN1 (ENSAPEG00000022436) fam8a1b (ENSAPEG00000022206) HEY1 (ENSAPEG00000022181) stmn2b (ENSAPEG00000022163) upp1 (ENSAPEG00000022138) ENSAPEG00000022115 rbm12bb (ENSAPEG00000022079) Orange clownfish MODERN SPECIES 21 FRRS1L (ENSAPEG00000001051) TMEM245 (ENSAPEG00000000973) GALNT1 (ENSAPEG00000000920) ino80c (ENSAPEG00000000884) SCRT1 (ENSAPEG00000000869) dgat1b (ENSAPEG00000000792) GPR20 (ENSAPEG00000000743) SLC45A4 (ENSAPEG00000000692) DENND3 (ENSAPEG00000000517) ATP4A (ENSAPEG00000000426) TBRG4 (ENSAPEG00000000413) ENSAPEG00000000405 glipr2l (ENSAPEG00000000368) steap4 (ENSAPEG00000000361) ENSAPEG00000000354 ##22 ENSAPEG00000000324 ##22 ENSAPEG00000022811 ##22 ENSAPEG00000022772 ##22 steap4 (ENSAPEG00000022725) ENSAPEG00000022714 ENSAPEG00000022694 mindy3 (ENSAPEG00000022645) ITGA8 (ENSAPEG00000022470) ATXN1 (ENSAPEG00000022436) fam8a1b (ENSAPEG00000022206) HEY1 (ENSAPEG00000022181) stmn2b (ENSAPEG00000022163) upp1 (ENSAPEG00000022138) ENSAPEG00000022115 rbm12bb (ENSAPEG00000022079) ENSAPEG00000021975 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 268 dgat1b (ENSAPOG00000004052) GPR20 (ENSAPOG00000004073) SLC45A4 (ENSAPOG00000004134) DENND3 (ENSAPOG00000004292) ATP4A (ENSAPOG00000004382) ENSAPOG00000000108 ENSAPOG00000004398 glipr2l (ENSAPOG00000004427) steap4 (ENSAPOG00000004450) ENSAPOG00000004493 ##22 ENSAPOG00000004512 ##22 ENSAPOG00000004534 ##22 steap4 (ENSAPOG00000004703) ENSAPOG00000004753 ENSAPOG00000004772 mindy3 (ENSAPOG00000004804) ITGA8 (ENSAPOG00000004971) ATXN1 (ENSAPOG00000005003) Spiny chromis MODERN SPECIES 268 dgat1b (ENSAPOG00000004052) GPR20 (ENSAPOG00000004073) SLC45A4 (ENSAPOG00000004134) DENND3 (ENSAPOG00000004292) ATP4A (ENSAPOG00000004382) ENSAPOG00000000108 ENSAPOG00000004398 glipr2l (ENSAPOG00000004427) steap4 (ENSAPOG00000004450) ENSAPOG00000004493 ##22 ENSAPOG00000004512 ##22 ENSAPOG00000004534 ##22 steap4 (ENSAPOG00000004703) ENSAPOG00000004753 ENSAPOG00000004772 mindy3 (ENSAPOG00000004804) ITGA8 (ENSAPOG00000004971) ATXN1 (ENSAPOG00000005003) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 324 ino80c (ENSSPAG00000002181) SCRT1 (ENSSPAG00000002200) dgat1b (ENSSPAG00000002218) GPR20 (ENSSPAG00000002293) SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Bicolor damselfish MODERN SPECIES 324 SCRT1 (ENSSPAG00000002200) dgat1b (ENSSPAG00000002218) GPR20 (ENSSPAG00000002293) SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Bicolor damselfish MODERN SPECIES 324 GALNT1 (ENSSPAG00000002098) ino80c (ENSSPAG00000002181) SCRT1 (ENSSPAG00000002200) dgat1b (ENSSPAG00000002218) GPR20 (ENSSPAG00000002293) SLC45A4 (ENSSPAG00000002339) DENND3 (ENSSPAG00000002359) ATP4A (ENSSPAG00000002398) ENSSPAG00000002482 ENSSPAG00000002511 ENSSPAG00000002561 glipr2l (ENSSPAG00000002571) steap4 (ENSSPAG00000002598) ENSSPAG00000002617 ENSSPAG00000002644 ENSSPAG00000002669 ##22 ENSSPAG00000002696 ##22 ENSSPAG00000002703 ##22 ENSSPAG00000002719 ##22 ENSSPAG00000002745 ##22 ENSSPAG00000003044 ##22 steap4 (ENSSPAG00000003133) ENSSPAG00000003256 mindy3 (ENSSPAG00000003284) ITGA8 (ENSSPAG00000003334) ATXN1 (ENSSPAG00000003388) fam8a1b (ENSSPAG00000003408) ENSSPAG00000003454 Pinecone sodierfish DUPLICATION Pinecone sodierfish DUPLICATION Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 7 TMEM245 (ENSMMDG00005002245) GALNT1 (ENSMMDG00005001310) ino80c (ENSMMDG00005001198) ENSMMDG00005022156 dgat1b (ENSMMDG00005022154) GPR20 (ENSMMDG00005022149) SLC45A4 (ENSMMDG00005022144) DENND3 (ENSMMDG00005022127) ATP4A (ENSMMDG00005022115) TBRG4 (ENSMMDG00005022109) ENSMMDG00005022103 glipr2l (ENSMMDG00005022100) steap4 (ENSMMDG00005022009) ENSMMDG00005021990 ##22 ENSMMDG00005021935 ##22 ENSMMDG00005021882 ##22 ENSMMDG00005021867 ##22 steap4 (ENSMMDG00005021862) ENSMMDG00005021860 mindy3 (ENSMMDG00005021854) ITGA8 (ENSMMDG00005021796) ATXN1 (ENSMMDG00005021788) fam8a1b (ENSMMDG00005021785) fabp4b (ENSMMDG00005021784) HEY1 (ENSMMDG00005021781) ENSMMDG00005021662 upp1 (ENSMMDG00005021655) ENSMMDG00005021654 rbm12bb (ENSMMDG00005021653) ENSMMDG00005021187 ENSMMDG00005021168 Pinecone sodierfish MODERN SPECIES 7 GALNT1 (ENSMMDG00005001310) ino80c (ENSMMDG00005001198) ENSMMDG00005022156 dgat1b (ENSMMDG00005022154) GPR20 (ENSMMDG00005022149) SLC45A4 (ENSMMDG00005022144) DENND3 (ENSMMDG00005022127) ATP4A (ENSMMDG00005022115) TBRG4 (ENSMMDG00005022109) ENSMMDG00005022103 glipr2l (ENSMMDG00005022100) steap4 (ENSMMDG00005022009) ENSMMDG00005021990 ##22 ENSMMDG00005021935 ##22 ENSMMDG00005021882 ##22 ENSMMDG00005021867 ##22 steap4 (ENSMMDG00005021862) ENSMMDG00005021860 mindy3 (ENSMMDG00005021854) ITGA8 (ENSMMDG00005021796) ATXN1 (ENSMMDG00005021788) fam8a1b (ENSMMDG00005021785) fabp4b (ENSMMDG00005021784) HEY1 (ENSMMDG00005021781) ENSMMDG00005021662 upp1 (ENSMMDG00005021655) ENSMMDG00005021654 rbm12bb (ENSMMDG00005021653) ENSMMDG00005021187 ENSMMDG00005021168 NBEAL2 (ENSMMDG00005020988) Pinecone sodierfish MODERN SPECIES 7 FRRS1L (ENSMMDG00005003476) ENSMMDG00005003472 TMEM245 (ENSMMDG00005002245) GALNT1 (ENSMMDG00005001310) ino80c (ENSMMDG00005001198) ENSMMDG00005022156 dgat1b (ENSMMDG00005022154) GPR20 (ENSMMDG00005022149) SLC45A4 (ENSMMDG00005022144) DENND3 (ENSMMDG00005022127) ATP4A (ENSMMDG00005022115) TBRG4 (ENSMMDG00005022109) ENSMMDG00005022103 glipr2l (ENSMMDG00005022100) steap4 (ENSMMDG00005022009) ENSMMDG00005021990 ##22 ENSMMDG00005021935 ##22 ENSMMDG00005021882 ##22 ENSMMDG00005021867 ##22 steap4 (ENSMMDG00005021862) ENSMMDG00005021860 mindy3 (ENSMMDG00005021854) ITGA8 (ENSMMDG00005021796) ATXN1 (ENSMMDG00005021788) fam8a1b (ENSMMDG00005021785) fabp4b (ENSMMDG00005021784) HEY1 (ENSMMDG00005021781) ENSMMDG00005021662 upp1 (ENSMMDG00005021655) ENSMMDG00005021654 rbm12bb (ENSMMDG00005021653) Pinecone sodierfish MODERN SPECIES 7 ENSMMDG00005003472 TMEM245 (ENSMMDG00005002245) GALNT1 (ENSMMDG00005001310) ino80c (ENSMMDG00005001198) ENSMMDG00005022156 dgat1b (ENSMMDG00005022154) GPR20 (ENSMMDG00005022149) SLC45A4 (ENSMMDG00005022144) DENND3 (ENSMMDG00005022127) ATP4A (ENSMMDG00005022115) TBRG4 (ENSMMDG00005022109) ENSMMDG00005022103 glipr2l (ENSMMDG00005022100) steap4 (ENSMMDG00005022009) ENSMMDG00005021990 ##22 ENSMMDG00005021935 ##22 ENSMMDG00005021882 ##22 ENSMMDG00005021867 ##22 steap4 (ENSMMDG00005021862) ENSMMDG00005021860 mindy3 (ENSMMDG00005021854) ITGA8 (ENSMMDG00005021796) ATXN1 (ENSMMDG00005021788) fam8a1b (ENSMMDG00005021785) fabp4b (ENSMMDG00005021784) HEY1 (ENSMMDG00005021781) ENSMMDG00005021662 upp1 (ENSMMDG00005021655) ENSMMDG00005021654 rbm12bb (ENSMMDG00005021653) ENSMMDG00005021187 Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 2 ENSGMOG00000024905 ENSGMOG00000003804 ENSGMOG00000000412 ##22 ENSGMOG00000035942 ENSGMOG00000036552 ENSGMOG00000026929 ENSGMOG00000032818 ENSGMOG00000000420 ENSGMOG00000003829 ##22 steap4 (ENSGMOG00000000401) ENSGMOG00000026671 ENSGMOG00000013586 ENSGMOG00000013568 ENSGMOG00000013533 ENSGMOG00000035426 ENSGMOG00000034343 ENSGMOG00000005606 ENSGMOG00000033471 ENSGMOG00000036639 ENSGMOG00000023835 upp1 (ENSGMOG00000013475) ENSGMOG00000031146 rbm12bb (ENSGMOG00000036421) ENSGMOG00000035453 Cod MODERN SPECIES 2 ENSGMOG00000024905 ENSGMOG00000003804 ENSGMOG00000000412 ##22 ENSGMOG00000035942 ENSGMOG00000036552 ENSGMOG00000026929 ENSGMOG00000032818 ENSGMOG00000000420 ENSGMOG00000003829 ##22 steap4 (ENSGMOG00000000401) ENSGMOG00000026671 ENSGMOG00000013586 ENSGMOG00000013568 ENSGMOG00000013533 ENSGMOG00000035426 ENSGMOG00000034343 ENSGMOG00000005606 ENSGMOG00000033471 Cod MODERN SPECIES 16 ENSGMOG00000005495 zgc:158803 (ENSGMOG00000005508) ENSGMOG00000005537 ENSGMOG00000025230 ENSGMOG00000030910 ENSGMOG00000005629 ENSGMOG00000005650 ENSGMOG00000005677 ENSGMOG00000024902 ENSGMOG00000005756 ENSGMOG00000017252 ap1m2 (ENSGMOG00000017224) ENSGMOG00000017215 ENSGMOG00000017211 keap1b (ENSGMOG00000017172) ENSGMOG00000025173 ##22 ENSGMOG00000025550 ENSGMOG00000026676 ENSGMOG00000009442 ENSGMOG00000009456 ENSGMOG00000009476 ENSGMOG00000025336 ENSGMOG00000036296 ENSGMOG00000035376 ENSGMOG00000022935 ENSGMOG00000009754 ENSGMOG00000009669 ENSGMOG00000009712 ENSGMOG00000009717 ENSGMOG00000025548 nptxrb (ENSGMOG00000032042) Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000164907.b.a ENSGT01090000260003.a.b.b.a.a.a.a ENSGT00940000154394.a.e.b ENSGT00940000165492.b ENSGT00930000151044 ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000155151.a.a.b ENSGT00940000164907.b.b ENSGT00940000154394.b.a.a.b.b ENSGT00940000165492.a.a ENSGT00620000089226 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT00390000020276 ENSGT00390000008042.B.o ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.p ENSGT00390000016526 ENSGT00940000160451 ENSGT00940000154645.B ENSGT00940000164697.b ENSGT00940000157194 ENSGT00390000016384.l.b ENSGT00390000016384.m ENSGT00940000153772.B ENSGT00550000074961.a ENSGT00940000165424.a.b.b ENSGT01000000215397.A ENSGT00940000163383 ENSGT00940000155841.c.a ENSGT00940000158633.b Salmoninae ANCESTRAL SPECIES 485 ENSGT00940000156004.t ENSGT01100000263542.A.c ENSGT00420000029769.a.i.a ENSGT00420000029769.a.j ENSGT00940000160695.d ENSGT01030000234607.A.a.b.a.d ENSGT00940000161501.a ENSGT00390000020276.kb.b ENSGT00390000008042.B.o.b.b.b.b ENSGT00390000008042.B.o.b.b.a ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.p ENSGT00940000160479 ENSGT00410000028469.f ENSGT00940000155958.y ENSGT00940000156737.e.a.b ENSGT00940000156737.e.a.a.a ENSGT00950000183112.b.b.r ENSGT00940000159283.c.b.c ENSGT00950000182919.B.a.g.d ENSGT00390000013847.l Salmoninae_a ANCESTRAL SPECIES 96 ENSGT00940000155533.d.m ENSGT00940000154766.b.t.b ENSGT01020000230359.B.a.p ENSGT01020000230359.B.b.b ENSGT01020000230359.A.r ENSGT00530000063608.A.gb ENSGT00940000155909.o.a.a ENSGT00940000156004.t ENSGT01100000263542.A.c ENSGT00420000029769.a.i.a ENSGT00940000160695.d ENSGT01030000234607.A.a.b.a.d ENSGT00940000161501.a ENSGT00390000020276.kb.b ENSGT00390000008042.B.o.b.b.a ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.p ENSGT00940000160479 ENSGT00410000028469.f ENSGT00940000155958.y ENSGT00940000156737.e.a.b ENSGT00950000183112.b.b.r ENSGT00940000159283.c.b.c ENSGT00950000182919.B.a.g.d ENSGT00390000013847.l ENSGT00940000159822.g.a ENSGT00940000153269.a.b ENSGT00940000153269.a.a ENSGT00940000161854.a.c ENSGT00940000176166 ENSGT00940000156361.A.a Salmo ANCESTRAL SPECIES 32 ENSGT00940000155533.d.m ENSGT00940000154766.b.t.b ENSGT01020000230359.B.a.p ENSGT01020000230359.B.b.b ENSGT01020000230359.A.r ENSGT00530000063608.A.gb ENSGT00940000155909.o.a.a ENSGT00940000156004.t ENSGT01100000263542.A.c ENSGT00420000029769.a.i.a ENSGT00940000160695.d ENSGT01030000234607.A.a.b.a.d ENSGT00940000161501.a ENSGT00390000020276.kb.b ENSGT00390000008042.B.o.b.b.a.a ENSGT01100000263515.a.b.a.b.b.k.a.a.b ##22 ENSGT00390000008042.B.p ENSGT00940000160479 ENSGT00410000028469.f ENSGT00940000155958.y ENSGT00940000156737.e.a.b ENSGT00950000183112.b.b.r ENSGT00940000159283.c.b.c ENSGT00950000182919.B.a.g.d ENSGT00390000013847.l ENSGT00940000159822.g.a ENSGT00940000153269.a.b ENSGT00940000153269.a.a ENSGT00940000161854.a.c ENSGT01000000216257 ENSGT00940000164158.A.a.f Atlantic salmon MODERN SPECIES 11 ENSSSAG00000089081 ENSSSAG00000035944 ENSSSAG00000036208 cobl (ENSSSAG00000036348) ENSSSAG00000037403 ddc (ENSSSAG00000039933) entpd3 (ENSSSAG00000041445) ENSSSAG00000041471 pomgnt2 (ENSSSAG00000092435) ENSSSAG00000041485 ENSSSAG00000083385 ENSSSAG00000089316 steap4 (ENSSSAG00000041680) ENSSSAG00000042166 steap4 (ENSSSAG00000042215) ENSSSAG00000042248 ##22 steap4 (ENSSSAG00000042298) ENSSSAG00000042332 ENSSSAG00000106004 ENSSSAG00000097179 ENSSSAG00000042339 mindy3 (ENSSSAG00000042363) ENSSSAG00000042854 hjv (ENSSSAG00000043429) thbs3 (ENSSSAG00000043508) mtx1a (ENSSSAG00000045447) nudt17 (ENSSSAG00000045506) ENSSSAG00000121557 ADAM15 (ENSSSAG00000045531) ENSSSAG00000108713 dcst2 (ENSSSAG00000106285) River trout MODERN SPECIES 30 CCR8 (ENSSTUG00000038949) ENSSTUG00000038954 ENSSTUG00000038964 cobl (ENSSTUG00000038969) GRB10 (ENSSTUG00000039099) ddc (ENSSTUG00000041458) ENSSTUG00000042101 entpd3 (ENSSTUG00000042104) GASK1A (ENSSTUG00000042120) pomgnt2 (ENSSTUG00000042138) TBRG4 (ENSSTUG00000042159) ENSSTUG00000042211 glipr2l (ENSSTUG00000042236) steap4 (ENSSTUG00000042311) ENSSTUG00000042905 ENSSTUG00000042955 ##22 ENSSTUG00000043020 ENSSTUG00000043051 mindy3 (ENSSTUG00000043103) ITGA8 (ENSSTUG00000043600) hjv (ENSSTUG00000043829) thbs3a (ENSSTUG00000043902) mtx1a (ENSSTUG00000046205) nudt17 (ENSSTUG00000046220) ADAM15 (ENSSTUG00000046241) ENSSTUG00000046288 dcst2 (ENSSTUG00000046308) s100v1 (ENSSTUG00000046319) ENSSTUG00000046324 zgc:171704 (ENSSTUG00000046340) ENSSTUG00000046349 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 Salmoninae ANCESTRAL SPECIES 307 ENSGT00390000000046.j ENSGT00940000163077.f ENSGT00940000155525.f ENSGT00940000158658.c ENSGT00940000176198 ENSGT00390000008787.b.f ENSGT00390000008978.db ENSGT00940000158482.e ENSGT00940000157425.B.c ENSGT00730000111063.c ENSGT00940000164222.c ENSGT01030000234641.a.b ENSGT00940000153430.a.b.f ENSGT00940000155493.m ENSGT00940000165086.b.l ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 ENSGT00940000157051.f ENSGT00940000162185.c ENSGT00720000108792.A.c.b ENSGT00940000162844 ENSGT00940000156782.c.c ENSGT00940000161552.e ENSGT00940000161907.a ENSGT01030000236031 Huchen MODERN SPECIES 979 eif3s10 (ENSHHUG00000034940) dennd10 (ENSHHUG00000035173) ENSHHUG00000035186 sfxn4 (ENSHHUG00000035190) prdx3 (ENSHHUG00000035198) tm9sf3 (ENSHHUG00000035216) ENSHHUG00000035245 ENSHHUG00000035268 ##22 MOCOS (ENSHHUG00000035292) zgc:110045 (ENSHHUG00000035331) vwc2 (ENSHHUG00000035346) SPATA48 (ENSHHUG00000035350) ikzf1 (ENSHHUG00000035360) fignl1 (ENSHHUG00000035419) ttl (ENSHHUG00000035422) polr1b (ENSHHUG00000035432) nanp (ENSHHUG00000035471) cyp1b1 (ENSHHUG00000035473) ENSHHUG00000035476 Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00390000000046.j ENSGT00940000163077.f ENSGT00940000155525.f ENSGT00940000158658.c ENSGT00940000176198 ENSGT00390000008787.b.f ENSGT00390000008978.db ENSGT00940000158482.e ENSGT00940000157425.B.c ENSGT00730000111063.c ENSGT00940000164222.c ENSGT01030000234641.a.b ENSGT00940000153430.a.b.f ENSGT00940000155493.m ENSGT00940000165086.b.l ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 ENSGT00940000157051.f ENSGT00940000162185.c ENSGT00720000108792.A.c.b ENSGT00940000162844 ENSGT00940000156782.c.c ENSGT00940000161552.e ENSGT00940000161907.a ENSGT01030000236031 ENSGT00390000003094 ENSGT00950000183037.B.a.o ENSGT00950000182992.a.b.a.a.a ENSGT00940000157736.t ENSGT01100000263502.A.a.b.l ENSGT00390000000747.n ENSGT00940000155780.h Salmo ANCESTRAL SPECIES 23 ENSGT00390000007221.a.b.v ENSGT00390000000046.j ENSGT00940000163077.f ENSGT00940000155525.f ENSGT00940000158658.c ENSGT00390000008787.b.f ENSGT00390000008978.db ENSGT00940000158482.e ENSGT00940000157425.B.c ENSGT00730000111063.c ENSGT00940000164222.c ENSGT01030000234641.a.b ENSGT00940000153430.a.b.f ENSGT00940000155493.m ENSGT00940000165086.b.l ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 ENSGT00940000157051.f ENSGT00940000162185.c ENSGT00720000108792.A.c.b ENSGT00940000162844 ENSGT00940000156782.c.c ENSGT00940000161552.e ENSGT00940000161907.a ENSGT01030000236031 ENSGT00390000003094 ENSGT00950000183037.B.a.o ENSGT00950000182992.a.b.a.a.a ENSGT00940000157736.t ENSGT01100000263502.A.a.b.l ENSGT00390000000747.n ENSGT00940000155780.h Atlantic salmon MODERN SPECIES pdlim1 (ENSSSAG00000006903) ENSSSAG00000006922 ENSSSAG00000006986 fam204a (ENSSSAG00000006993) rab11fip2 (ENSSSAG00000007000) ENSSSAG00000095718 emx2 (ENSSSAG00000007004) eif3s10 (ENSSSAG00000007047) ENSSSAG00000094938 dennd10 (ENSSSAG00000007951) sfxn4 (ENSSSAG00000007961) PRDX3 (ENSSSAG00000007976) tm9sf3 (ENSSSAG00000008049) ENSSSAG00000053156 ENSSSAG00000008210 ENSSSAG00000008280 ##22 zgc:110045 (ENSSSAG00000008314) vwc2 (ENSSSAG00000008379) SPATA48 (ENSSSAG00000008381) ikzf1 (ENSSSAG00000008390) fignl1 (ENSSSAG00000008559) ttl (ENSSSAG00000096737) ENSSSAG00000008577 nanp (ENSSSAG00000084980) cyp1b1 (ENSSSAG00000115170) ENSSSAG00000008595 cdc42ep3 (ENSSSAG00000087269) ENSSSAG00000084460 opn3 (ENSSSAG00000008619) kmo (ENSSSAG00000008648) ide (ENSSSAG00000008849) River trout MODERN SPECIES 9 sgpl1 (ENSSTUG00000004366) neurog3 (ENSSTUG00000005003) pdlim1 (ENSSTUG00000005015) ENSSTUG00000005092 ENSSTUG00000005245 ENSSTUG00000005266 RAB11FIP2 (ENSSTUG00000005274) emx2 (ENSSTUG00000005282) eif3s10 (ENSSTUG00000005360) dennd10 (ENSSTUG00000007388) sfxn4 (ENSSTUG00000007408) prdx3 (ENSSTUG00000007420) tm9sf3 (ENSSTUG00000007464) ENSSTUG00000007523 MOCOS (ENSSTUG00000007573) ENSSTUG00000007624 ##22 zgc:110045 (ENSSTUG00000007635) vwc2 (ENSSTUG00000007652) SPATA48 (ENSSTUG00000007662) ikzf1 (ENSSTUG00000007682) fignl1 (ENSSTUG00000007953) ttl (ENSSTUG00000007958) nanp (ENSSTUG00000007979) cyp1b1 (ENSSTUG00000007983) ENSSTUG00000007996 cdc42ep3 (ENSSTUG00000008031) opn3 (ENSSTUG00000008035) kmo (ENSSTUG00000008056) ide (ENSSTUG00000008606) marchf5 (ENSSTUG00000008753) cpeb3 (ENSSTUG00000008786) Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00390000000046.j ENSGT00940000163077.f ENSGT00940000155525.f ENSGT00940000158658.c ENSGT00940000176198 ENSGT00390000008787.b.f ENSGT00390000008978.db ENSGT00940000158482.e ENSGT00940000157425.B.c ENSGT00730000111063.c ENSGT00940000164222.c ENSGT01030000234641.a.b ENSGT00940000153430.a.b.f ENSGT00940000155493.m ENSGT00940000165086.b.l ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 ENSGT00940000157051.f ENSGT00940000162185.c ENSGT00720000108792.A.c.b ENSGT00940000175717 ENSGT00940000162844 ENSGT00940000156782.c.c ENSGT00940000161552.e ENSGT00940000161907.a ENSGT01030000236031 ENSGT00390000003094 ENSGT00950000183037.B.a.o ENSGT00950000182992.a.b.a.a.a ENSGT00940000157736.t ENSGT01100000263502.A.a.b.l ENSGT00390000000747.n Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00390000000046.j ENSGT00940000163077.f ENSGT00940000155525.f ENSGT00940000158658.c ENSGT00940000176198 ENSGT00390000008787.b.f ENSGT00390000008978.db ENSGT00940000158482.e ENSGT00940000157425.B.c ENSGT00730000111063.c ENSGT00940000164222.c ENSGT01030000234641.a.b ENSGT00940000153430.a.b.f ENSGT00940000155493.m ENSGT00940000165086.b.l ENSGT01100000263515.a.b.a.b.b.k.a.b ##22 ENSGT00940000157051.f ENSGT00940000162185.c ENSGT00720000108792.A.c.b ENSGT00940000162844 ENSGT00940000156782.c.c ENSGT00940000161552.e ENSGT00940000161907.a ENSGT01030000236031 ENSGT00390000003094 ENSGT00950000183037.B.a.o ENSGT00950000182992.a.b.a.a.a ENSGT00940000157736.t ENSGT01100000263502.A.a.b.l ENSGT00390000000747.n ENSGT00940000155780.h Coho salmon MODERN SPECIES 2 pcbd1 (ENSOKIG00005021953) sgpl1 (ENSOKIG00005021787) neurog3 (ENSOKIG00005021719) pdlim1 (ENSOKIG00005016721) ENSOKIG00005016714 ENSOKIG00005016704 fam204a (ENSOKIG00005016668) RAB11FIP2 (ENSOKIG00005016660) emx2 (ENSOKIG00005016649) eif3s10 (ENSOKIG00005016289) dennd10 (ENSOKIG00005016234) sfxn4 (ENSOKIG00005016216) prdx3 (ENSOKIG00005016178) tm9sf3 (ENSOKIG00005016025) ENSOKIG00005015930 ENSOKIG00005015915 ##22 MOCOS (ENSOKIG00005015830) zgc:110045 (ENSOKIG00005015792) vwc2 (ENSOKIG00005015778) SPATA48 (ENSOKIG00005015762) ikzf1 (ENSOKIG00005015493) fignl1 (ENSOKIG00005015470) ttl (ENSOKIG00005015448) ENSOKIG00005015435 nanp (ENSOKIG00005015432) cyp1b1 (ENSOKIG00005015422) ENSOKIG00005015405 cdc42ep3 (ENSOKIG00005015398) ENSOKIG00005015395 opn3 (ENSOKIG00005015387) kmo (ENSOKIG00005015340) Chinook salmon MODERN SPECIES pcbd1 (ENSOTSG00005004425) sgpl1 (ENSOTSG00005004433) neurog3 (ENSOTSG00005006561) ENSOTSG00005006562 ENSOTSG00005006568 ENSOTSG00005006570 fam204a (ENSOTSG00005006572) RAB11FIP2 (ENSOTSG00005006574) emx2 (ENSOTSG00005006575) eif3s10 (ENSOTSG00005006585) dennd10 (ENSOTSG00005008921) sfxn4 (ENSOTSG00005008922) prdx3 (ENSOTSG00005008923) tm9sf3 (ENSOTSG00005009018) ENSOTSG00005010136 ENSOTSG00005010139 ##22 MOCOS (ENSOTSG00005010140) zgc:110045 (ENSOTSG00005010141) vwc2 (ENSOTSG00005010143) ikzf1 (ENSOTSG00005010144) fignl1 (ENSOTSG00005010405) ttl (ENSOTSG00005010406) ENSOTSG00005010407 nanp (ENSOTSG00005010408) cyp1b1 (ENSOTSG00005010409) ENSOTSG00005010410 ENSOTSG00005010411 cdc42ep3 (ENSOTSG00005010412) opn3 (ENSOTSG00005010413) kmo (ENSOTSG00005010414) ide (ENSOTSG00005010418) Rainbow trout MODERN SPECIES 15 neurog3 (ENSOMYG00000044186) pdlim1 (ENSOMYG00000044187) ENSOMYG00000044192 ENSOMYG00000077884 ENSOMYG00000044197 fam204a (ENSOMYG00000054669) ENSOMYG00000044202 emx2 (ENSOMYG00000044204) eif3s10 (ENSOMYG00000044248) dennd10 (ENSOMYG00000044767) sfxn4 (ENSOMYG00000044778) prdx3 (ENSOMYG00000044795) tm9sf3 (ENSOMYG00000044819) ENSOMYG00000070145 ENSOMYG00000044924 ENSOMYG00000044912 ##22 ENSOMYG00000065832 zgc:110045 (ENSOMYG00000044960) vwc2 (ENSOMYG00000044970) ENSOMYG00000044982 ENSOMYG00000073036 ENSOMYG00000055349 ikzf1 (ENSOMYG00000044996) fignl1 (ENSOMYG00000045107) ttl (ENSOMYG00000045112) nanp (ENSOMYG00000077849) cyp1b1 (ENSOMYG00000045123) ENSOMYG00000045126 cdc42ep3 (ENSOMYG00000045132) opn3 (ENSOMYG00000045133) kmo (ENSOMYG00000045143) Otomorpha ANCESTRAL SPECIES 482 ENSGT01100000263515.a.b.a.b.b.k.a ##22 ENSGT00940000157051 ENSGT00940000162185 ENSGT00940000162768.A ENSGT00720000108792.A ENSGT00940000175717 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 Clupeiformes ANCESTRAL SPECIES 8 ENSGT01100000263515.a.b.a.b.b.k.a ##22 ENSGT00940000157051 ENSGT00940000162185 ENSGT00720000108792.A ENSGT00940000175717 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00990000214327 ENSGT00940000161907 ENSGT00950000182936.a.b.a ENSGT00940000158288 ENSGT00390000004068 ENSGT00950000183169.C ENSGT00520000055589.c ENSGT00530000063672.a Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 4 agt (ENSCHAG00000022397) cog2 (ENSCHAG00000022420) pgbd5 (ENSCHAG00000022632) galnt2 (ENSCHAG00000022660) urb2 (ENSCHAG00000023137) ABCB10 (ENSCHAG00000023154) acta1b (ENSCHAG00000023199) ccsapb (ENSCHAG00000023211) rab4a (ENSCHAG00000023214) rhoua (ENSCHAG00000000372) pdcd2 (ENSCHAG00000000391) ENSCHAG00000000526 PWWP2B (ENSCHAG00000000649) ENSCHAG00000000668 nkx6.2 (ENSCHAG00000000692) ENSCHAG00000000804 ##22 ENSCHAG00000000939 ##22 tbp (ENSCHAG00000001081) psmb1 (ENSCHAG00000001279) phf10 (ENSCHAG00000001338) fam120b (ENSCHAG00000001431) dld (ENSCHAG00000001484) mkks (ENSCHAG00000001560) srd5a2b (ENSCHAG00000001588) memo1 (ENSCHAG00000001609) ENSCHAG00000001691 VIT (ENSCHAG00000001728) ENSCHAG00000001984 ENSCHAG00000002002 ENSCHAG00000002033 irf1a (ENSCHAG00000002319) Atlantic herring MODERN SPECIES 4 actn2b (ENSCHAG00000008103) ENSCHAG00000010078 tial1 (ENSCHAG00000017561) PKD2L1 (ENSCHAG00000017632) atoh7 (ENSCHAG00000017707) MYPN (ENSCHAG00000017715) CACUL1 (ENSCHAG00000017883) ENSCHAG00000017897 MTLN (ENSCHAG00000018035) ENSCHAG00000018044 ENSCHAG00000018151 ENSCHAG00000018221 ENSCHAG00000018245 ENSCHAG00000018438 ENSCHAG00000018461 ENSCHAG00000018493 ##22 ENSCHAG00000018617 ##22 ENSCHAG00000018650 ##22 ENSCHAG00000018659 ##22 MOCOS (ENSCHAG00000018708) zgc:110045 (ENSCHAG00000019196) vwc2 (ENSCHAG00000019241) SPATA48 (ENSCHAG00000019249) ikzf1 (ENSCHAG00000019263) fignl1 (ENSCHAG00000019351) ttl (ENSCHAG00000019358) fhip2a (ENSCHAG00000019387) ENSCHAG00000019831 PLPP4 (ENSCHAG00000019861) wdr11 (ENSCHAG00000019878) si:ch211-198a12.6 (ENSCHAG00000019945) Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 4 tial1 (ENSCHAG00000017561) PKD2L1 (ENSCHAG00000017632) atoh7 (ENSCHAG00000017707) MYPN (ENSCHAG00000017715) CACUL1 (ENSCHAG00000017883) ENSCHAG00000017897 MTLN (ENSCHAG00000018035) ENSCHAG00000018044 ENSCHAG00000018151 ENSCHAG00000018221 ENSCHAG00000018245 ENSCHAG00000018438 ENSCHAG00000018461 ENSCHAG00000018493 ##22 ENSCHAG00000018617 ##22 ENSCHAG00000018650 ##22 ENSCHAG00000018659 ##22 MOCOS (ENSCHAG00000018708) zgc:110045 (ENSCHAG00000019196) vwc2 (ENSCHAG00000019241) SPATA48 (ENSCHAG00000019249) ikzf1 (ENSCHAG00000019263) fignl1 (ENSCHAG00000019351) ttl (ENSCHAG00000019358) fhip2a (ENSCHAG00000019387) ENSCHAG00000019831 PLPP4 (ENSCHAG00000019861) wdr11 (ENSCHAG00000019878) si:ch211-198a12.6 (ENSCHAG00000019945) stox1 (ENSCHAG00000019950) ccar1 (ENSCHAG00000019967) Atlantic herring MODERN SPECIES 4 cog2 (ENSCHAG00000022420) pgbd5 (ENSCHAG00000022632) galnt2 (ENSCHAG00000022660) urb2 (ENSCHAG00000023137) ABCB10 (ENSCHAG00000023154) acta1b (ENSCHAG00000023199) ccsapb (ENSCHAG00000023211) rab4a (ENSCHAG00000023214) rhoua (ENSCHAG00000000372) pdcd2 (ENSCHAG00000000391) ENSCHAG00000000526 PWWP2B (ENSCHAG00000000649) ENSCHAG00000000668 nkx6.2 (ENSCHAG00000000692) ENSCHAG00000000804 ##22 ENSCHAG00000000939 ##22 tbp (ENSCHAG00000001081) psmb1 (ENSCHAG00000001279) phf10 (ENSCHAG00000001338) fam120b (ENSCHAG00000001431) dld (ENSCHAG00000001484) mkks (ENSCHAG00000001560) srd5a2b (ENSCHAG00000001588) memo1 (ENSCHAG00000001609) ENSCHAG00000001691 VIT (ENSCHAG00000001728) ENSCHAG00000001984 ENSCHAG00000002002 ENSCHAG00000002033 irf1a (ENSCHAG00000002319) ENSCHAG00000002378 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 4 PKD2L1 (ENSCHAG00000017632) atoh7 (ENSCHAG00000017707) MYPN (ENSCHAG00000017715) CACUL1 (ENSCHAG00000017883) ENSCHAG00000017897 MTLN (ENSCHAG00000018035) ENSCHAG00000018044 ENSCHAG00000018151 ENSCHAG00000018221 ENSCHAG00000018245 ENSCHAG00000018438 ENSCHAG00000018461 ENSCHAG00000018493 ##22 ENSCHAG00000018617 ##22 ENSCHAG00000018650 ##22 ENSCHAG00000018659 ##22 MOCOS (ENSCHAG00000018708) zgc:110045 (ENSCHAG00000019196) vwc2 (ENSCHAG00000019241) SPATA48 (ENSCHAG00000019249) ikzf1 (ENSCHAG00000019263) fignl1 (ENSCHAG00000019351) ttl (ENSCHAG00000019358) fhip2a (ENSCHAG00000019387) ENSCHAG00000019831 PLPP4 (ENSCHAG00000019861) wdr11 (ENSCHAG00000019878) si:ch211-198a12.6 (ENSCHAG00000019945) stox1 (ENSCHAG00000019950) ccar1 (ENSCHAG00000019967) zgc:110319 (ENSCHAG00000020522) Atlantic herring MODERN SPECIES 4 ENSCHAG00000010078 tial1 (ENSCHAG00000017561) PKD2L1 (ENSCHAG00000017632) atoh7 (ENSCHAG00000017707) MYPN (ENSCHAG00000017715) CACUL1 (ENSCHAG00000017883) ENSCHAG00000017897 MTLN (ENSCHAG00000018035) ENSCHAG00000018044 ENSCHAG00000018151 ENSCHAG00000018221 ENSCHAG00000018245 ENSCHAG00000018438 ENSCHAG00000018461 ENSCHAG00000018493 ##22 ENSCHAG00000018617 ##22 ENSCHAG00000018650 ##22 ENSCHAG00000018659 ##22 MOCOS (ENSCHAG00000018708) zgc:110045 (ENSCHAG00000019196) vwc2 (ENSCHAG00000019241) SPATA48 (ENSCHAG00000019249) ikzf1 (ENSCHAG00000019263) fignl1 (ENSCHAG00000019351) ttl (ENSCHAG00000019358) fhip2a (ENSCHAG00000019387) ENSCHAG00000019831 PLPP4 (ENSCHAG00000019861) wdr11 (ENSCHAG00000019878) si:ch211-198a12.6 (ENSCHAG00000019945) stox1 (ENSCHAG00000019950) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 19 si:ch211-216l23.2 (ENSCHAG00000006832) ENSCHAG00000006862 ENSCHAG00000006871 CDH13 (ENSCHAG00000006883) mlycd (ENSCHAG00000007075) ENSCHAG00000007124 hsbp1b (ENSCHAG00000009231) ENSCHAG00000009243 KCNG4 (ENSCHAG00000009250) ENSCHAG00000009256 wfdc1 (ENSCHAG00000009262) utp4 (ENSCHAG00000009273) chtf8 (ENSCHAG00000009339) has3 (ENSCHAG00000009365) TANGO6 (ENSCHAG00000009384) ENSCHAG00000009473 ##22 ENSCHAG00000009484 ##22 ENSCHAG00000009505 ENSCHAG00000009535 ENSCHAG00000009550 ADCK2 (ENSCHAG00000009571) DENND2A (ENSCHAG00000009667) TEAD4 (ENSCHAG00000010099) ENSCHAG00000010644 ENSCHAG00000010648 mrps35 (ENSCHAG00000010666) ENSCHAG00000010676 cdkn1bb (ENSCHAG00000010926) yars2 (ENSCHAG00000010940) pparab (ENSCHAG00000010950) WNT7B (ENSCHAG00000011107) Atlantic herring MODERN SPECIES 19 ENSCHAG00000006862 ENSCHAG00000006871 CDH13 (ENSCHAG00000006883) mlycd (ENSCHAG00000007075) ENSCHAG00000007124 hsbp1b (ENSCHAG00000009231) ENSCHAG00000009243 KCNG4 (ENSCHAG00000009250) ENSCHAG00000009256 wfdc1 (ENSCHAG00000009262) utp4 (ENSCHAG00000009273) chtf8 (ENSCHAG00000009339) has3 (ENSCHAG00000009365) TANGO6 (ENSCHAG00000009384) ENSCHAG00000009473 ##22 ENSCHAG00000009484 ##22 ENSCHAG00000009505 ENSCHAG00000009535 ENSCHAG00000009550 ADCK2 (ENSCHAG00000009571) DENND2A (ENSCHAG00000009667) TEAD4 (ENSCHAG00000010099) ENSCHAG00000010644 ENSCHAG00000010648 mrps35 (ENSCHAG00000010666) ENSCHAG00000010676 cdkn1bb (ENSCHAG00000010926) yars2 (ENSCHAG00000010940) pparab (ENSCHAG00000010950) WNT7B (ENSCHAG00000011107) fbln1 (ENSCHAG00000011192) Denticle herring MODERN SPECIES 18 ENSDCDG00000035335 MSS51 (ENSDCDG00000035339) CAPN15 (ENSDCDG00000035342) ENSDCDG00000035346 slc6a16b (ENSDCDG00000035350) SLC17A7 (ENSDCDG00000003229) CHRM3 (ENSDCDG00000004035) ENSDCDG00000004038 GREM2 (ENSDCDG00000004039) rgs7a (ENSDCDG00000004075) kif11 (ENSDCDG00000004413) slc22a15 (ENSDCDG00000004423) cyp26c1 (ENSDCDG00000004425) reep3a (ENSDCDG00000004427) ENSDCDG00000004434 ENSDCDG00000004450 ##22 MOCOS (ENSDCDG00000004466) zgc:110045 (ENSDCDG00000004490) vwc2 (ENSDCDG00000004492) ENSDCDG00000004494 ikzf1 (ENSDCDG00000004507) ENSDCDG00000004649 ttl (ENSDCDG00000004654) fhip2a (ENSDCDG00000004665) PLPP4 (ENSDCDG00000004726) wdr11 (ENSDCDG00000004743) si:ch211-198a12.6 (ENSDCDG00000004751) stox1 (ENSDCDG00000004754) ccar1 (ENSDCDG00000004758) zgc:110319 (ENSDCDG00000004784) si:dkey-228d14.5 (ENSDCDG00000004790) Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Osteoglossiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Asian bonytongue MODERN SPECIES LPAR2 (ENSSFOG00015000209) ENSSFOG00015000097 akap8l (ENSSFOG00015020914) ENSSFOG00015020911 ENSSFOG00015029832 ENSSFOG00015020852 nxnl1 (ENSSFOG00015020903) colgalt1b (ENSSFOG00015020892) p2ry11 (ENSSFOG00015020888) slc27a1a (ENSSFOG00015020809) ptger1c (ENSSFOG00015026802) ENSSFOG00015020783 ENSSFOG00015026397 ENSSFOG00015020764 ENSSFOG00015020748 ENSSFOG00015020734 ##22 ADGRL1 (ENSSFOG00015020691) ENSSFOG00015020721 ENSSFOG00015026947 ENSSFOG00015031900 ENSSFOG00015029009 ENSSFOG00015020321 ENSSFOG00015020274 ENSSFOG00015020257 ENSSFOG00015020221 DNM2 (ENSSFOG00015020166) ENSSFOG00015031501 ENSSFOG00015020136 ENSSFOG00015020115 ENSSFOG00015032339 ENSSFOG00015019789 P. kingsleyae MODERN SPECIES 92 ACLY (ENSPKIG00000001569) CNP (ENSPKIG00000001465) DNAJC7 (ENSPKIG00000001416) nkiras2 (ENSPKIG00000001394) ZNF385C (ENSPKIG00000001346) kat2a (ENSPKIG00000001284) RAB5C (ENSPKIG00000001237) KCNH4 (ENSPKIG00000001192) HCRT (ENSPKIG00000001162) ENSPKIG00000001143 ghdc (ENSPKIG00000001116) stat5b (ENSPKIG00000001089) STAT3 (ENSPKIG00000000984) cavin1b (ENSPKIG00000000943) atp6v0a1b (ENSPKIG00000000853) ENSPKIG00000000806 ##22 stk17al (ENSPKIG00000000794) NAGLU (ENSPKIG00000000770) coasy (ENSPKIG00000000708) ENSPKIG00000000665 pus3 (ENSPKIG00000000646) dcakd (ENSPKIG00000000634) C1QL1 (ENSPKIG00000000626) ENSPKIG00000000599 ENSPKIG00000000575 ENSPKIG00000000556 RAMP2 (ENSPKIG00000000544) EZH1 (ENSPKIG00000000468) ENSPKIG00000000350 ccr10 (ENSPKIG00000000313) PLEKHH3 (ENSPKIG00000000304) Clupeocephala ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Euteleosteomorpha ANCESTRAL SPECIES 227 ENSGT00950000183080.a.b.b.a.b ENSGT00940000158710 ENSGT00940000157961.A ENSGT00940000156292.g.a ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT01030000234575.c.a.a.a.b ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478 ENSGT00550000075038 ENSGT00950000183160.A ENSGT00940000163949.a ENSGT00550000075078 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a Acanthomorphata ANCESTRAL SPECIES 131 ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000158256.g ENSGT00950000182849.B.c.b.b ENSGT00940000158883.b ENSGT00390000014660 ENSGT00530000063937.a ##13 ENSGT00940000155223.a.b ENSGT00940000164818.c.a ENSGT00940000153840.a.a.a.a ENSGT00940000166206 ENSGT00390000016550 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00940000160906 ENSGT00950000183187.B ENSGT00940000154003.B Euacanthomorphacea ANCESTRAL SPECIES 34 ENSGT00940000160801 ENSGT00510000046608.A ENSGT01070000253744.a.a.a.b.a.b ENSGT00940000157276.d ENSGT00940000153251.b.b ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000161333 ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000156993.c ENSGT00940000160739 ENSGT00940000157982.a.a ENSGT01100000263521.a.a.b.a.a ENSGT01080000257420.C.b.b.c.b ENSGT00950000182910.b.g.a ENSGT00950000182881.a.a.b.i.a Percomorphaceae ANCESTRAL SPECIES 69 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT01080000257420.C.b.b.c.b ENSGT00940000157276.d ENSGT00940000153251.b.b ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000161333 ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Ovalentaria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Ovalentaria_B ANCESTRAL SPECIES 32 ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000158912.j.a ENSGT00940000156528.d ENSGT00980000198805 ENSGT00940000167286 ENSGT00950000183116.b.a.b.a ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000157058.k ENSGT00730000111686.f ENSGT00940000174804 ENSGT01030000234613.b.a.a.c.b ENSGT00940000154862.x.a.b.b ENSGT00970000193712 ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00390000010349.a.a Cichlidae ANCESTRAL SPECIES 12 ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00980000198805 ENSGT00950000183116.b.a.b.a ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000157058.k ENSGT00730000111686.f ENSGT00940000154862.x.a.b.b ENSGT00940000176951 ENSGT00970000193712 ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00390000010349.a.a ENSGT00940000155720.c.a Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00390000001793 ENSGT00940000161652.b.a ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a.o ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000157058.k ENSGT00730000111686.f ENSGT01030000234613.b.a.a.c.b ENSGT00940000154862.x.a.b.b ENSGT00940000176951.e.a ENSGT00970000193712 ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00940000155720.c.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00390000001793 ENSGT00940000161652.b.a ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a.o ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000157058.k ENSGT00730000111686.f ENSGT01030000234613.b.a.a.c.b ENSGT00940000154862.x.a.b.b ENSGT00940000176951.e.a ENSGT00970000193712 ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00390000010349.a.a Haplochromini ANCESTRAL SPECIES 13 ENSGT00390000001793 ENSGT00940000161652.b.a ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a.o ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000157058.k ENSGT00730000111686.f ENSGT01030000234613.b.a.a.c.b ENSGT00940000154862.x.a.b.b ENSGT00940000176951.e.a ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00390000010349.a.a ENSGT00940000155720.c.a Burton s mouthbrooder MODERN SPECIES 986 zbtb1 (ENSHBUG00000017122) ZBTB25 (ENSHBUG00000017128) ENSHBUG00000017139 ##22 Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00390000001793 ENSGT00940000161652.b.a ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a.o ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b.k ENSGT00940000157058.k ENSGT00730000111686.f ENSGT01030000234613.b.a.a.c.b ENSGT00940000154862.x.a.b.b ENSGT00940000176951.e.a ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m ENSGT00390000010349.a.a ENSGT00940000155720.c.a P. nyererei MODERN SPECIES 738 pak6b (ENSPNYG00000014577) ENSPNYG00000014408 zbtb1 (ENSPNYG00000014405) ZBTB25 (ENSPNYG00000014392) ENSPNYG00000014343 ##22 ENSPNYG00000014316 Haplochromini_B ANCESTRAL SPECIES 49 ENSGT00390000001793 ENSGT00940000161652.b.a ENSGT00940000156714.b ENSGT01030000234564.a.a.a.a.b.b ENSGT00390000007441 ENSGT01030000234667.b.f.a.o ENSGT00940000161983.b ENSGT00940000159075.B ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00940000156528.d ENSGT00940000167286 ENSGT00940000157501 ENSGT00940000159887 ENSGT00940000154746.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b.k ENSGT00940000157058.k ENSGT00730000111686.f ENSGT01030000234613.b.a.a.c.b ENSGT00940000176951.e.b ENSGT00940000164656.b.b.a.a.a.b.a.a.a.b.b.a.a.b ENSGT00940000154862.x.a.b.b ENSGT00940000176951.e.a ENSGT00950000182772.A.a.b.`b.b ENSGT00940000163655.b ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.b ENSGT01030000234517.H.a ENSGT00950000183136.a.b ENSGT00390000013955 ENSGT00940000155144.m Eastern happy MODERN SPECIES 6 ENSACLG00000014921 kidins220b (ENSACLG00000014954) mboat2b (ENSACLG00000015349) cep43 (ENSACLG00000015466) ENSACLG00000015539 ENSACLG00000015548 KIF26A (ENSACLG00000015595) PLEKHG3 (ENSACLG00000015668) spint1b (ENSACLG00000015827) pak6b (ENSACLG00000015852) myh6 (ENSACLG00000015908) ENSACLG00000015911 zbtb1 (ENSACLG00000015933) ZBTB25 (ENSACLG00000015938) ENSACLG00000015949 ENSACLG00000015991 ##22 ENSACLG00000016007 CEP170B (ENSACLG00000016120) ENSACLG00000016172 ENSACLG00000016200 ENSACLG00000016232 ENSACLG00000016253 MARK3 (ENSACLG00000016273) ENSACLG00000016371 ENSACLG00000016403 ckbb (ENSACLG00000016418) ENSACLG00000016439 prph2lb (ENSACLG00000016443) ENSACLG00000016448 cdc42bpb (ENSACLG00000016483) ENSACLG00000017057 Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005014705 ENSMZEG00005014692 kidins220b (ENSMZEG00005014597) mboat2b (ENSMZEG00005014563) ENSMZEG00005014551 ccr6a (ENSMZEG00005014546) ENSMZEG00005014542 KIF26A (ENSMZEG00005014535) ENSMZEG00005014530 PLEKHG3 (ENSMZEG00005014511) spint1b (ENSMZEG00005014493) pak6b (ENSMZEG00005014481) myh6 (ENSMZEG00005014476) zbtb1 (ENSMZEG00005014473) ZBTB25 (ENSMZEG00005014467) ENSMZEG00005014456 ##22 ENSMZEG00005014448 allc (ENSMZEG00005014438) ENSMZEG00005014433 asap2b (ENSMZEG00005014395) cpsf3 (ENSMZEG00005014358) ADAM17 (ENSMZEG00005014337) taf1b (ENSMZEG00005014323) klf11a (ENSMZEG00005014315) RRM2 (ENSMZEG00005014295) ENSMZEG00005014281 RRM2 (ENSMZEG00005014254) zdhhc14 (ENSMZEG00005014228) tmem242 (ENSMZEG00005014213) arid1b (ENSMZEG00005014174) CLDN20 (ENSMZEG00005014168) Lyretail cichlid MODERN SPECIES 318 mboat2b (ENSNBRG00000004440) cep43 (ENSNBRG00000004425) ccr6a (ENSNBRG00000004416) ENSNBRG00000004401 KIF26A (ENSNBRG00000004329) PLEKHG3 (ENSNBRG00000004246) spint1b (ENSNBRG00000003919) pak6b (ENSNBRG00000003864) ENSNBRG00000003842 myh6 (ENSNBRG00000003821) ENSNBRG00000003801 INAFM2 (ENSNBRG00000003787) zbtb1 (ENSNBRG00000003781) ZBTB25 (ENSNBRG00000003766) ENSNBRG00000003720 ENSNBRG00000003696 ##22 ENSNBRG00000003671 CEP170B (ENSNBRG00000003530) ENSNBRG00000003484 ENSNBRG00000003458 ENSNBRG00000003440 ENSNBRG00000003333 ENSNBRG00000003271 ENSNBRG00000003251 ENSNBRG00000003228 ckbb (ENSNBRG00000003192) ENSNBRG00000003170 ENSNBRG00000003155 ENSNBRG00000003142 cdc42bpb (ENSNBRG00000002959) ENSNBRG00000002907 Nile tilapia MODERN SPECIES 6 ENSONIG00000040677 KIF26A (ENSONIG00000018832) ENSONIG00000036629 ENSONIG00000033893 PLEKHG3 (ENSONIG00000018834) spint1b (ENSONIG00000018836) ENSONIG00000030965 pak6b (ENSONIG00000018837) myh6 (ENSONIG00000021261) ENSONIG00000029544 INAFM2 (ENSONIG00000042210) ENSONIG00000030639 ENSONIG00000038327 zbtb1 (ENSONIG00000021262) zbtb25 (ENSONIG00000042861) ENSONIG00000018840 ##22 ENSONIG00000033376 CEP170B (ENSONIG00000018846) ENSONIG00000018850 ENSONIG00000018851 ENSONIG00000028114 ENSONIG00000019022 ENSONIG00000037576 MARK3 (ENSONIG00000019014) ENSONIG00000019017 ENSONIG00000019019 ckbb (ENSONIG00000019020) prph2lb (ENSONIG00000020147) ENSONIG00000037245 cdc42bpb (ENSONIG00000019024) ENSONIG00000021182 Midas cichlid MODERN SPECIES 261 ENSACIG00000017567 ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Eupercaria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00390000006705 ENSGT00940000157276.d ENSGT00940000153251.b.b ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000161333 ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b.d ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT01080000257420.C.b.b.c.b ENSGT00950000182910.b.g.a ENSGT00950000182881.a.a.b.i.a ENSGT01100000263513.a.a.b.a.b.b ENSGT00940000160801 ENSGT00940000154873 ENSGT00940000153500.a.b.e.b.d ENSGT00940000154003.B ENSGT00940000158962 ENSGT00940000166815 ENSGT00390000005739.a.b ENSGT00800000124060.B ENSGT00940000158210.d ENSGT00940000158794 ENSGT00390000000984 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00390000006705 ENSGT00940000157276.d ENSGT00940000153251.b.b ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b.d ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT01080000257420.C.b.b.c.b ENSGT00950000182910.b.g.a ENSGT00950000182881.a.a.b.i.a ENSGT01100000263513.a.a.b.a.b.b ENSGT00940000160801 ENSGT00940000154873 ENSGT00940000153500.a.b.e.b.d ENSGT00940000154003.B ENSGT00940000158962 ENSGT00940000166815 ENSGT00390000005739.a.b ENSGT00800000124060.B ENSGT00940000158210.d ENSGT00940000158794 ENSGT00390000000984 Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00390000006705 ENSGT00940000157276.d ENSGT00940000178264 ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000161333 ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b.d ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT01080000257420.C.b.b.c.b ENSGT00950000182910.b.g.a ENSGT00950000182881.a.a.b.i.a ENSGT01100000263513.a.a.b.a.b.b ENSGT00940000160801 ENSGT00940000154873 ENSGT00940000153500.a.b.e.b.d ENSGT00940000154003.B ENSGT00940000158962 ENSGT00940000166815 ENSGT00390000005739.a.b ENSGT00800000124060.B ENSGT00940000158210.d ENSGT00940000158794 ENSGT00390000000984 Gilthead seabream MODERN SPECIES 12 ENSSAUG00010009580 ENSSAUG00010009575 hs3st3l (ENSSAUG00010009571) dhrs7cb (ENSSAUG00010009569) ENSSAUG00010009553 ENSSAUG00010009546 bsk146 (ENSSAUG00010009543) ENSSAUG00010009541 enpp7.2 (ENSSAUG00010009528) ENSSAUG00010009525 tfam (ENSSAUG00010009521) ube2d1b (ENSSAUG00010009506) ipmkb (ENSSAUG00010009498) NAGLU (ENSSAUG00010009494) ENSSAUG00010009491 ENSSAUG00010009489 ##22 ENSSAUG00010009488 stat5b (ENSSAUG00010009480) cavin1b (ENSSAUG00010009474) atp6v0a1b (ENSSAUG00010009430) rfng (ENSSAUG00010009428) dcxr (ENSSAUG00010009425) rac3b (ENSSAUG00010009420) LRRC45 (ENSSAUG00010008969) trub1 (ENSSAUG00010008947) ENSSAUG00010008944 ENSSAUG00010008943 ENSSAUG00010008942 exoc6 (ENSSAUG00010008930) cyp26a1 (ENSSAUG00010008917) ENSSAUG00010008914 Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00390000006705 ENSGT00940000157276.d ENSGT00940000178264 ENSGT00940000158181.b ENSGT00940000153536.a.b.b.a.a ENSGT00940000161333 ENSGT00940000159924.c.a ENSGT00940000159339.sb.a ENSGT00390000013948.b ENSGT00440000039001 ENSGT00940000155109.a.b.d ENSGT00940000155309 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT01080000257420.C.b.b.c.b ENSGT00950000182910.b.g.a ENSGT00950000182881.a.a.b.i.a ENSGT01100000263513.a.a.b.a.b.b ENSGT00940000160801 ENSGT00940000154873 ENSGT00940000153500.a.b.e.b.d ENSGT00940000154003.B ENSGT00940000158962 ENSGT00940000166815 ENSGT00390000005739.a.b ENSGT00800000124060.B ENSGT00940000158210.d ENSGT00940000158794 ENSGT00390000000984 Large yellow croaker MODERN SPECIES 488 ENSLCRG00005017932 ENSLCRG00005017933 ENSLCRG00005017937 ENSLCRG00005017977 ENSLCRG00005017978 ENPP7 (ENSLCRG00005017980) ENPP7 (ENSLCRG00005017981) zgc:171971 (ENSLCRG00005017983) tfam (ENSLCRG00005017984) ube2d1b (ENSLCRG00005017985) ipmkb (ENSLCRG00005018174) NAGLU (ENSLCRG00005018177) ENSLCRG00005018178 ##22 ENSLCRG00005018180 stat5b (ENSLCRG00005018181) cavin1b (ENSLCRG00005018253) atp6v0a1b (ENSLCRG00005018258) rfng (ENSLCRG00005018454) dcxr (ENSLCRG00005018456) rac3b (ENSLCRG00005018457) LRRC45 (ENSLCRG00005018495) ENSLCRG00005018740 trub1 (ENSLCRG00005018743) ENSLCRG00005018747 exoc6 (ENSLCRG00005018757) cyp26a1 (ENSLCRG00005018802) JMJD1C (ENSLCRG00005018808) reep3b (ENSLCRG00005018820) European seabass MODERN SPECIES 11 ENSDLAG00005017028 CCDC57 (ENSDLAG00005016649) slc16a3b (ENSDLAG00005016642) ENSDLAG00005016631 CSNK1D (ENSDLAG00005016504) c1qtnf1 (ENSDLAG00005030021) ccdc57 (ENSDLAG00005016677) RBFOX3 (ENSDLAG00005028078) ENSDLAG00005003959 ENSDLAG00005021251 ENSDLAG00005030378 tfam (ENSDLAG00005030023) UBE2D1 (ENSDLAG00005021161) IPMK (ENSDLAG00005033893) ENSDLAG00005021149 ENSDLAG00005021145 ##22 ENSDLAG00005021137 CAVIN1 (ENSDLAG00005004886) ATP6V0A1 (ENSDLAG00005019950) ENSDLAG00005019879 rfng (ENSDLAG00005019825) dcxr (ENSDLAG00005019789) rac3b (ENSDLAG00005034099) LRRC45 (ENSDLAG00005020148) ENSDLAG00005030429 ENSDLAG00005027120 ENSDLAG00005018236 ENSDLAG00005029514 ENSDLAG00005033975 ENSDLAG00005016079 nrbf2b (ENSDLAG00005033037) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 393 ENSLBEG00000009671 ENPP7 (ENSLBEG00000009654) ENPP7 (ENSLBEG00000009631) zgc:171971 (ENSLBEG00000009545) tfam (ENSLBEG00000009502) ube2d1b (ENSLBEG00000009470) ipmkb (ENSLBEG00000009446) NAGLU (ENSLBEG00000009426) ENSLBEG00000009418 ##22 stat5b (ENSLBEG00000009363) cavin1b (ENSLBEG00000009319) atp6v0a1b (ENSLBEG00000009168) rfng (ENSLBEG00000009115) dcxr (ENSLBEG00000009052) rac3b (ENSLBEG00000009001) Ballan wrasse MODERN SPECIES 2021 NAGLU (ENSLBEG00000015575) ENSLBEG00000015544 ##22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Carangaria ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 Carangaria_A ANCESTRAL SPECIES 35 ENSGT01030000234613.b.a.a.c.b ENSGT00940000174804 ENSGT00730000111686.f ENSGT00940000157058.k.h ENSGT00940000156521.b ENSGT01030000236465 ENSGT01060000248856 ENSGT00940000164935.b ENSGT00940000158912.j.a ENSGT00940000156528.d ENSGT00940000167286 ENSGT00980000198805 ENSGT00950000183116.b.a.b.a ENSGT00940000157501 ENSGT00940000159887 ENSGT01100000263515.a.b.a.b.b.k.b.a.a ##22 ENSGT00940000155691.c.b ENSGT00940000159075.B ENSGT00940000161983.b ENSGT01030000234667.b.f.a ENSGT00390000007441 ENSGT01030000234564.a.a.a.a.b.b ENSGT00940000156714.b ENSGT00940000177938 ENSGT00940000161652.b.a ENSGT00390000001793 ENSGT00940000167539 ENSGT00940000155699.a.a ENSGT00940000155443.d ENSGT00440000033827 ENSGT00940000155982.e.b Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 385 ENSLCAG00010018217 ENSLCAG00010018213 PLEKHG3 (ENSLCAG00010018207) ENSLCAG00010018204 ENSLCAG00010018203 ENSLCAG00010018201 ENSLCAG00010018200 pak6b (ENSLCAG00010018105) ENSLCAG00010018065 myh6 (ENSLCAG00010018062) ENSLCAG00010018057 ENSLCAG00010018052 zbtb1 (ENSLCAG00010018049) ZBTB25 (ENSLCAG00010018048) ENSLCAG00010018030 ENSLCAG00010018026 ##22 ENSLCAG00010018024 ##22 INF2 (ENSLCAG00010018019) ENSLCAG00010018014 CEP170B (ENSLCAG00010018009) ENSLCAG00010018004 ENSLCAG00010018000 ENSLCAG00010017996 MARK3 (ENSLCAG00010017986) ENSLCAG00010017980 ckbb (ENSLCAG00010017966) prph2lb (ENSLCAG00010017963) ENSLCAG00010017960 ENSLCAG00010017957 ENSLCAG00010017956 cdc42bpb (ENSLCAG00010017932) Barramundi perch MODERN SPECIES 385 ENSLCAG00010018213 PLEKHG3 (ENSLCAG00010018207) ENSLCAG00010018204 ENSLCAG00010018203 ENSLCAG00010018201 ENSLCAG00010018200 pak6b (ENSLCAG00010018105) ENSLCAG00010018065 myh6 (ENSLCAG00010018062) ENSLCAG00010018057 ENSLCAG00010018052 zbtb1 (ENSLCAG00010018049) ZBTB25 (ENSLCAG00010018048) ENSLCAG00010018030 ENSLCAG00010018026 ##22 ENSLCAG00010018024 ##22 INF2 (ENSLCAG00010018019) ENSLCAG00010018014 CEP170B (ENSLCAG00010018009) ENSLCAG00010018004 ENSLCAG00010018000 ENSLCAG00010017996 MARK3 (ENSLCAG00010017986) ENSLCAG00010017980 ckbb (ENSLCAG00010017966) prph2lb (ENSLCAG00010017963) ENSLCAG00010017960 ENSLCAG00010017957 ENSLCAG00010017956 cdc42bpb (ENSLCAG00010017932) ENSLCAG00010017913 Pinecone sodierfish MODERN SPECIES 10 llgl2 (ENSMMDG00005023747) galk1 (ENSMMDG00005023866) ENSMMDG00005023867 atp6v0a1b (ENSMMDG00005023871) cavin1b (ENSMMDG00005023875) stat5b (ENSMMDG00005023889) ENSMMDG00005023924 ENSMMDG00005023928 ENSMMDG00005023931 PLCD3 (ENSMMDG00005023932) NAGLU (ENSMMDG00005023934) ipmkb (ENSMMDG00005023936) UBE2D1 (ENSMMDG00005023943) tfam (ENSMMDG00005023994) zgc:171971 (ENSMMDG00005023998) ENSMMDG00005024000 ##22 enpp7.2 (ENSMMDG00005024002) ENSMMDG00005024006 RBFOX3 (ENSMMDG00005002489) c1qtnf1 (ENSMMDG00005002517) CSNK1D (ENSMMDG00005002524) slc16a3b (ENSMMDG00005002551) CCDC57 (ENSMMDG00005002588) ccdc57 (ENSMMDG00005002740) ENSMMDG00005003084 gps1 (ENSMMDG00005003149) rfng (ENSMMDG00005005428) dcxr (ENSMMDG00005005453) rac3b (ENSMMDG00005005458) LRRC45 (ENSMMDG00005005488) ENSMMDG00005005672 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 Salmoninae ANCESTRAL SPECIES 1947 ENSGT00940000158434.d.a ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00940000154537.lb.d ENSGT00940000155970.z.a ENSGT00390000013481.c.b.b ENSGT00940000164285.a.a ENSGT00940000165391.f ENSGT00940000154141.B.ib ENSGT00940000158638.d ENSGT00950000182980.a.b.b.b.ec ENSGT00390000018245.s ENSGT00940000161584.n ENSGT00390000013008.g ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00940000159658.b.b.d ENSGT00940000154815.b.b.f.a.a ENSGT00940000158434.d.a ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 ENSGT00390000001205.a.c ENSGT00940000157303.e.g ENSGT00950000183075.a.a.a.a.r ENSGT00990000210314 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00390000000614.d Salmo ANCESTRAL SPECIES 23 ENSGT00970000197742 ENSGT00940000154141.B.ib ENSGT00940000158638.d ENSGT00950000182980.a.b.b.b.ec ENSGT00390000018245.s ENSGT00940000157675.c ENSGT00940000161584.n ENSGT00390000013008.g ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00940000159658.b.b.d ENSGT00940000154815.b.b.f.a.a ENSGT00940000164656.b.b.a.a.a.a.`b.a ENSGT00970000193390.c.b.b.a.m ENSGT00390000003039.f ENSGT00940000158434.d.a ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 ENSGT00390000001205.a.c ENSGT00940000157303.e.g ENSGT00950000183075.a.a.a.a.r ENSGT00990000210314 ENSGT01060000251565 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b.g ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00390000000614.d Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES TTC7A (ENSSSAG00000001340) calm2a (ENSSSAG00000001376) ENSSSAG00000001412 ENSSSAG00000103031 ZFP36L2 (ENSSSAG00000101693) ENSSSAG00000107312 ENSSSAG00000103084 OXER1 (ENSSSAG00000120100) KCNG3 (ENSSSAG00000120609) COX7A2L (ENSSSAG00000001433) ENSSSAG00000001436 ENSSSAG00000001444 ENSSSAG00000001448 EML4 (ENSSSAG00000040250) ENSSSAG00000027035 ##22 ENSSSAG00000028365 ##22 pkdcc (ENSSSAG00000028618) ENSSSAG00000109094 prph2b (ENSSSAG00000104476) ENSSSAG00000032452 ENSSSAG00000055884 ENSSSAG00000055889 ENSSSAG00000059951 ENSSSAG00000094772 ENSSSAG00000107433 ncoa4 (ENSSSAG00000055914) yipf3 (ENSSSAG00000055922) ENSSSAG00000121854 ENSSSAG00000091674 DLK2 (ENSSSAG00000106977) mea1 (ENSSSAG00000055949) Atlantic salmon MODERN SPECIES DLK2 (ENSSSAG00000106977) ENSSSAG00000091674 ENSSSAG00000121854 yipf3 (ENSSSAG00000055922) ncoa4 (ENSSSAG00000055914) ENSSSAG00000107433 ENSSSAG00000094772 ENSSSAG00000059951 ENSSSAG00000055889 ENSSSAG00000055884 ENSSSAG00000032452 prph2b (ENSSSAG00000104476) ENSSSAG00000109094 pkdcc (ENSSSAG00000028618) ENSSSAG00000028365 ##22 ENSSSAG00000027035 ##22 EML4 (ENSSSAG00000040250) ENSSSAG00000001448 ENSSSAG00000001444 ENSSSAG00000001436 COX7A2L (ENSSSAG00000001433) KCNG3 (ENSSSAG00000120609) OXER1 (ENSSSAG00000120100) ENSSSAG00000103084 ENSSSAG00000107312 ZFP36L2 (ENSSSAG00000101693) ENSSSAG00000103031 ENSSSAG00000001412 calm2a (ENSSSAG00000001376) TTC7A (ENSSSAG00000001340) mcfd2 (ENSSSAG00000001329) River trout MODERN SPECIES 9 mcfd2 (ENSSTUG00000012244) TTC7A (ENSSTUG00000012255) calm2a (ENSSTUG00000012369) epcam (ENSSTUG00000012415) zfp36l2 (ENSSTUG00000012467) ENSSTUG00000012476 haao (ENSSTUG00000012482) OXER1 (ENSSTUG00000012504) KCNG3 (ENSSTUG00000012507) COX7A2L (ENSSTUG00000012531) ENSSTUG00000012547 ENSSTUG00000012553 ENSSTUG00000012561 ENSSTUG00000012570 EML4 (ENSSTUG00000012648) ENSSTUG00000013848 ##22 pkdcca (ENSSTUG00000013852) prph2b (ENSSTUG00000013857) UBR2 (ENSSTUG00000013917) ENSSTUG00000015192 ENSSTUG00000015210 ENSSTUG00000015213 QKI (ENSSTUG00000015221) ENSSTUG00000015253 ncoa4 (ENSSTUG00000015261) yipf3 (ENSSTUG00000015288) LRRC73 (ENSSTUG00000015414) ENSSTUG00000024881 DLK2 (ENSSTUG00000024891) mea1 (ENSSTUG00000024902) ppp2r5d (ENSSTUG00000024928) Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000164285.a.a ENSGT00940000165391.f ENSGT00940000154141.B.ib ENSGT00940000158638.d ENSGT00950000182980.a.b.b.b.ec ENSGT00390000018245.s ENSGT00940000161584.n ENSGT00390000013008.g ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00940000159658.b.b.d ENSGT00940000154815.b.b.f.b ENSGT00970000193390.c.b.b.a.m ENSGT00390000003039.f ENSGT00940000158434.d.b.b ENSGT00940000158434.d.a ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 ENSGT00390000001205.a.c ENSGT00940000157303.e.g ENSGT00950000183075.a.a.a.a.r ENSGT00390000011034.sc.a.b ENSGT00940000155310.a.b.d ENSGT00990000210314 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c Rainbow trout MODERN SPECIES 15 mcfd2 (ENSOMYG00000050235) TTC7A (ENSOMYG00000012288) ENSOMYG00000058731 calm2a (ENSOMYG00000012322) ENSOMYG00000012390 ENSOMYG00000064896 ENSOMYG00000063290 ENSOMYG00000055884 ENSOMYG00000012438 KCNG3 (ENSOMYG00000012443) ENSOMYG00000012449 ENSOMYG00000012471 ENSOMYG00000012476 EML4 (ENSOMYG00000013339) ENSOMYG00000064175 ENSOMYG00000064619 ##22 pkdcca (ENSOMYG00000025394) prph2b (ENSOMYG00000025420) ENSOMYG00000026458 ENSOMYG00000031909 ENSOMYG00000073233 ENSOMYG00000031975 ENSOMYG00000032001 ncoa4 (ENSOMYG00000032024) yipf3 (ENSOMYG00000032086) ENSOMYG00000032182 ENSOMYG00000032186 DLK2 (ENSOMYG00000032195) ENSOMYG00000048363 mea1 (ENSOMYG00000032200) ppp2r5d (ENSOMYG00000032657) Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155970.z.a ENSGT00390000013481.c.b.b ENSGT00940000164285.a.a ENSGT00940000165391.f ENSGT00940000154141.B.ib ENSGT00940000158638.d ENSGT00950000182980.a.b.b.b.ec ENSGT00390000018245.s ENSGT00940000161584.n ENSGT00390000013008.g ENSGT00990000203619.A.b.b.b.a.e.j ENSGT00940000159658.b.b.d ENSGT00940000154815.b.b.f.b ENSGT00390000003039.f ENSGT00940000158434.d.b.b ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e ##22 ENSGT00390000001205.a.c ENSGT00940000157303.e.g ENSGT00950000183075.a.a.a.a.r ENSGT00390000011034.sc.a.b ENSGT00990000210314 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p Coho salmon MODERN SPECIES 2 socs5b (ENSOKIG00005004398) ENSOKIG00005004349 mcfd2 (ENSOKIG00005004332) TTC7A (ENSOKIG00005004215) calm2a (ENSOKIG00005004174) epcam (ENSOKIG00005004156) zfp36l2 (ENSOKIG00005004145) haao (ENSOKIG00005004125) OXER1 (ENSOKIG00005004115) ENSOKIG00005004113 KCNG3 (ENSOKIG00005004108) COX7A2L (ENSOKIG00005004104) ENSOKIG00005004093 ENSOKIG00005004086 EML4 (ENSOKIG00005003765) ENSOKIG00005003700 ##22 pkdcca (ENSOKIG00005003689) prph2b (ENSOKIG00005003683) UBR2 (ENSOKIG00005003086) ENSOKIG00005002803 ENSOKIG00005002790 QKI (ENSOKIG00005002772) ENSOKIG00005002759 ENSOKIG00005002735 ncoa4 (ENSOKIG00005002717) yipf3 (ENSOKIG00005002612) LRRC73 (ENSOKIG00005002574) ENSOKIG00005002559 DLK2 (ENSOKIG00005002543) mea1 (ENSOKIG00005002530) ppp2r5d (ENSOKIG00005002191) Chinook salmon MODERN SPECIES PWWP2B (ENSOTSG00005027801) STK32C (ENSOTSG00005027805) ENSOTSG00005027852 tmem254 (ENSOTSG00005027854) mxtx1 (ENSOTSG00005027855) rhoq (ENSOTSG00005027857) ENSOTSG00005027858 socs5b (ENSOTSG00005027859) mcfd2 (ENSOTSG00005027862) haao (ENSOTSG00005027868) OXER1 (ENSOTSG00005027870) KCNG3 (ENSOTSG00005027871) COX7A2L (ENSOTSG00005027872) ENSOTSG00005027874 EML4 (ENSOTSG00005027887) ENSOTSG00005028668 ##22 pkdcca (ENSOTSG00005028669) prph2b (ENSOTSG00005028670) UBR2 (ENSOTSG00005028752) prkn (ENSOTSG00005037121) ENSOTSG00005037122 ENSOTSG00005037123 ncoa4 (ENSOTSG00005037124) yipf3 (ENSOTSG00005000175) LRRC73 (ENSOTSG00005000184) ENSOTSG00005000186 ENSOTSG00005000189 DLK2 (ENSOTSG00005000190) mea1 (ENSOTSG00005000191) ppp2r5d (ENSOTSG00005000200) ENSOTSG00005000381 Huchen MODERN SPECIES 74 ENSHHUG00000038572 ##22 EML4 (ENSHHUG00000038657) ENSHHUG00000040448 COX7A2L (ENSHHUG00000040456) KCNG3 (ENSHHUG00000040469) ENSHHUG00000040471 OXER1 (ENSHHUG00000040475) haao (ENSHHUG00000040478) zfp36l2 (ENSHHUG00000040531) epcam (ENSHHUG00000040535) calm2a (ENSHHUG00000040562) TTC7A (ENSHHUG00000041004) mcfd2 (ENSHHUG00000041017) prop1 (ENSHHUG00000041021) socs5b (ENSHHUG00000041025) ENSHHUG00000041029 Northern pike DUPLICATION Northern pike MODERN SPECIES 5 ENSELUG00000015812 epcam (ENSELUG00000015828) PLEKHH2 (ENSELUG00000015877) THADA (ENSELUG00000015922) zfp36l2 (ENSELUG00000000600) ENSELUG00000028243 haao (ENSELUG00000015957) ENSELUG00000025235 OXER1 (ENSELUG00000015970) KCNG3 (ENSELUG00000015977) COX7A2L (ENSELUG00000016004) ENSELUG00000026063 ENSELUG00000016020 ENSELUG00000024859 EML4 (ENSELUG00000016121) ENSELUG00000016176 ##22 ENSELUG00000000614 ##22 ENSELUG00000033040 pkdcca (ENSELUG00000016230) ENSELUG00000029784 prph2b (ENSELUG00000016256) UBR2 (ENSELUG00000016522) ENSELUG00000016617 prkn (ENSELUG00000016662) QKI (ENSELUG00000016698) ENSELUG00000016707 ENSELUG00000016738 ncoa4 (ENSELUG00000016764) yipf3 (ENSELUG00000016794) LRRC73 (ENSELUG00000016819) ENSELUG00000016871 Northern pike MODERN SPECIES 5 DLK2 (ENSELUG00000016914) ENSELUG00000016871 LRRC73 (ENSELUG00000016819) yipf3 (ENSELUG00000016794) ncoa4 (ENSELUG00000016764) ENSELUG00000016738 ENSELUG00000016707 QKI (ENSELUG00000016698) prkn (ENSELUG00000016662) ENSELUG00000016617 UBR2 (ENSELUG00000016522) prph2b (ENSELUG00000016256) ENSELUG00000029784 pkdcca (ENSELUG00000016230) ENSELUG00000033040 ENSELUG00000000614 ##22 ENSELUG00000016176 ##22 EML4 (ENSELUG00000016121) ENSELUG00000024859 ENSELUG00000016020 ENSELUG00000026063 COX7A2L (ENSELUG00000016004) KCNG3 (ENSELUG00000015977) OXER1 (ENSELUG00000015970) ENSELUG00000025235 haao (ENSELUG00000015957) ENSELUG00000028243 zfp36l2 (ENSELUG00000000600) THADA (ENSELUG00000015922) PLEKHH2 (ENSELUG00000015877) epcam (ENSELUG00000015828) Protacanthopterygii ANCESTRAL SPECIES 69 ENSGT00940000166534 ENSGT01100000264459 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478 ENSGT00550000075038 ENSGT00950000183160.A ENSGT00940000163949.a ENSGT00550000075078 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a Salmoninae ANCESTRAL SPECIES 9 ENSGT00940000166534 ENSGT01100000264459 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478 ENSGT00550000075038 ENSGT00950000183160.A.g ENSGT00940000163949.a ENSGT00550000075078 ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000157202.g ENSGT00940000154971.u.a ENSGT00400000022326.b.a.b.b.a.a.b ENSGT00940000156363.a ENSGT00390000016401 ENSGT01080000257420.C.b.b.c.b ENSGT00520000055570.A.a ENSGT01050000245142 ENSGT00390000012628.k.c.a.b ENSGT00950000183092.b.a.a ENSGT00660000095569.d ENSGT00940000160871.d.a.c ENSGT00730000111283.b Huchen MODERN SPECIES 630 ENSHHUG00000032241 coasy (ENSHHUG00000032248) ENSHHUG00000032255 NAGLU (ENSHHUG00000032261) ENSHHUG00000032268 ##22 atp6v0a1b (ENSHHUG00000032282) ENSHHUG00000032459 cavin1b (ENSHHUG00000032461) ZNF385C (ENSHHUG00000032463) RAB5C (ENSHHUG00000032473) ENSHHUG00000032493 ENSHHUG00000032494 ENSHHUG00000032499 ENSHHUG00000032504 KCNH4 (ENSHHUG00000032507) ghdc (ENSHHUG00000032514) stat5b (ENSHHUG00000032574) GPAM (ENSHHUG00000032599) rpl19 (ENSHHUG00000032660) STAC2 (ENSHHUG00000032700) Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478.v ENSGT00550000075038 ENSGT00950000183160.A.g ENSGT00940000172928.b ENSGT00940000163949.a ENSGT00550000075078 ENSGT01100000263521.b ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00990000211432 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000157202.g ENSGT00940000154971.u.a ENSGT00400000022326.b.a.b.b.a.a.b ENSGT00940000156363.a ENSGT00390000016401 ENSGT01080000257420.C.b.b.c.b ENSGT00520000055570.A.a ENSGT01050000245142 ENSGT00390000012628.k.c.a.b ENSGT00950000183092.b.a.a ENSGT00660000095569.d ENSGT00940000160871.d.a.c Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478.v ENSGT00550000075038 ENSGT00950000183160.A.g ENSGT00940000172928.b ENSGT00940000163949.a ENSGT00550000075078 ENSGT01100000263521.b ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00990000211432 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000157202.g ENSGT00940000154971.u.a ENSGT00400000022326.b.a.b.b.a.a.b ENSGT00940000156363.a ENSGT00390000016401 ENSGT01080000257420.C.b.b.c.b ENSGT00520000055570.A.a ENSGT00390000012628.k.c.a.b ENSGT00950000183092.b.a.a ENSGT00660000095569.d ENSGT00940000160871.d.a.c ENSGT00730000111283.b Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478.v ENSGT00550000075038 ENSGT00950000183160.A.g ENSGT00940000172928.b ENSGT00940000163949.a ENSGT00550000075078 ENSGT01100000263521.b ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00990000211432 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000157202.g ENSGT00940000154971.u.a ENSGT01100000263533.b.b.a.b.a.a.a.a.b ENSGT00400000022326.b.a.b.b.a.a.b ENSGT00940000156363.a ENSGT00390000016401 ENSGT01080000257420.C.b.b.c.b ENSGT00520000055570.A.a ENSGT00390000012628.k.c.a.b ENSGT00950000183092.b.a.a ENSGT00660000095569.d ENSGT00940000160871.d.a.c Coho salmon MODERN SPECIES 12 ENSOKIG00005014915 ifnphi4 (ENSOKIG00005014907) ENSOKIG00005014902 ccr10 (ENSOKIG00005014896) ENSOKIG00005014893 ENSOKIG00005014888 ENSOKIG00005014877 C1QL1 (ENSOKIG00005014876) dcakd (ENSOKIG00005014867) pus3 (ENSOKIG00005014859) ENSOKIG00005014852 ENSOKIG00005014829 ENSOKIG00005014824 coasy (ENSOKIG00005014818) NAGLU (ENSOKIG00005014813) ENSOKIG00005014801 ##22 ENSOKIG00005014798 ATP6V0A1 (ENSOKIG00005014703) cavin1b (ENSOKIG00005014682) ENSOKIG00005014664 RAB5C (ENSOKIG00005014651) ENSOKIG00005014638 ENSOKIG00005014625 ENSOKIG00005014621 KCNH4 (ENSOKIG00005014568) ghdc (ENSOKIG00005014489) ENSOKIG00005014425 GPAM (ENSOKIG00005014103) RPL19 (ENSOKIG00005014021) STAC2 (ENSOKIG00005014009) MED1 (ENSOKIG00005013910) Chinook salmon MODERN SPECIES 16 scn4aa (ENSOTSG00005044007) ENSOTSG00005044004 ifnphi4 (ENSOTSG00005044003) ccr10 (ENSOTSG00005044001) ENSOTSG00005043998 ENSOTSG00005043997 ENSOTSG00005043996 C1QL1 (ENSOTSG00005043995) dcakd (ENSOTSG00005043994) pus3 (ENSOTSG00005043993) ENSOTSG00005043992 ENSOTSG00005043989 coasy (ENSOTSG00005043987) ENSOTSG00005043984 NAGLU (ENSOTSG00005043982) ENSOTSG00005043980 ##22 atp6v0a1b (ENSOTSG00005043740) cavin1b (ENSOTSG00005043739) ZNF385C (ENSOTSG00005043738) RAB5C (ENSOTSG00005043737) ENSOTSG00005043736 ENSOTSG00005043735 KCNH4 (ENSOTSG00005043473) stat5b (ENSOTSG00005043459) ENSOTSG00005043454 GPAM (ENSOTSG00005043268) rpl19 (ENSOTSG00005043259) STAC2 (ENSOTSG00005043258) ENSOTSG00005043257 MED1 (ENSOTSG00005043255) neurod2 (ENSOTSG00005043253) Rainbow trout MODERN SPECIES 7 ENSOMYG00000068782 ENSOMYG00000071942 ccr10 (ENSOMYG00000032778) ENSOMYG00000073308 ENSOMYG00000032772 ENSOMYG00000032751 ENSOMYG00000075693 ENSOMYG00000067399 dcakd (ENSOMYG00000032721) ENSOMYG00000032711 ENSOMYG00000032687 ENSOMYG00000032679 ENSOMYG00000066641 ENSOMYG00000032662 NAGLU (ENSOMYG00000020859) ENSOMYG00000020836 ##22 ENSOMYG00000050759 ENSOMYG00000020473 ENSOMYG00000076189 CAVIN1 (ENSOMYG00000020406) ENSOMYG00000053977 ENSOMYG00000020378 RAB5C (ENSOMYG00000020368) ENSOMYG00000020347 ENSOMYG00000020360 KCNH4 (ENSOMYG00000020219) GHDC (ENSOMYG00000020188) ENSOMYG00000018389 ENSOMYG00000017990 ENSOMYG00000017926 ENSOMYG00000017910 Salmo ANCESTRAL SPECIES 3 ENSGT00940000167352 ENSGT00730000111991 ENSGT00510000050089.a.b ENSGT01030000234667.a.a.a.a.a ENSGT00940000168205 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478.v ENSGT00550000075038 ENSGT00950000183160.A.g ENSGT00940000172928.b ENSGT00940000163949.a ENSGT00550000075078 ENSGT01100000263521.b ENSGT00390000005900 ENSGT01100000263515.a.b.a.b.b.k.b.a.a.f ##22 ENSGT00990000211432 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000157202.g ENSGT00940000154971.u.a.a ENSGT00940000172707.b.b ENSGT00940000162287.B.a.a.a.a ENSGT00940000156363.a ENSGT00390000016401 ENSGT01080000257420.C.b.b.c.b ENSGT00520000055570.A.a ENSGT01050000245142 ENSGT00390000012628.k.c.a.b ENSGT00950000183092.b.a.a ENSGT00660000095569.d River trout MODERN SPECIES 11 scn4aa (ENSSTUG00000027071) ENSSTUG00000027061 ifnphi4 (ENSSTUG00000027046) ccr10 (ENSSTUG00000027040) ENSSTUG00000027032 ENSSTUG00000027028 ENSSTUG00000027016 C1QL1 (ENSSTUG00000027013) dcakd (ENSSTUG00000027003) ENSSTUG00000026995 pus3 (ENSSTUG00000026988) ENSSTUG00000026960 coasy (ENSSTUG00000026949) ENSSTUG00000026944 NAGLU (ENSSTUG00000026934) ENSSTUG00000026930 ##22 ENSSTUG00000026922 atp6v0a1b (ENSSTUG00000026746) cavin1b (ENSSTUG00000026737) ENSSTUG00000026733 ENSSTUG00000025905 RAB5C (ENSSTUG00000025880) ENSSTUG00000025868 ENSSTUG00000025849 KCNH4 (ENSSTUG00000025767) ghdc (ENSSTUG00000025660) stat5b (ENSSTUG00000025451) GPAM (ENSSTUG00000024596) ENSSTUG00000024510 rpl19 (ENSSTUG00000024497) STAC2 (ENSSTUG00000024481) Northern pike MODERN SPECIES 4 scn4aa (ENSELUG00000006114) ENSELUG00000033962 ENSELUG00000006134 ifnphi4 (ENSELUG00000031561) ccr10 (ENSELUG00000006151) ENSELUG00000006173 ENSELUG00000004376 ENSELUG00000027174 C1QL1 (ENSELUG00000004402) dcakd (ENSELUG00000004393) pus3 (ENSELUG00000004425) ENSELUG00000004502 coasy (ENSELUG00000004534) NAGLU (ENSELUG00000034325) NAGLU (ENSELUG00000004542) ENSELUG00000024979 ##22 atp6v0a1b (ENSELUG00000004611) cavin1b (ENSELUG00000032131) ENSELUG00000004647 ENSELUG00000006537 ENSELUG00000004638 ENSELUG00000006504 ENSELUG00000025675 ENSELUG00000006525 ENSELUG00000030744 ENSELUG00000004664 ENSELUG00000006512 ENSELUG00000031917 ENSELUG00000009361 ENSELUG00000009116 ENSELUG00000005800 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Salmoninae ANCESTRAL SPECIES 600 ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000155704.bc.b ENSGT00940000157388.b.b.b ENSGT00530000064271 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.a.v.b ENSGT00940000164764.a.a ENSGT00940000165109.d ENSGT00940000157908.h.d ENSGT00940000157560.d.a.d ENSGT00950000182772.A.b ENSGT00940000160954.b ENSGT00940000154196.b.e.a ENSGT00940000155793.a.a.j ENSGT00550000074953.b ENSGT00940000165311.b.n.a.b.b Salmoninae_a ANCESTRAL SPECIES 121 ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000155704.bc.b ENSGT00940000157388.b.b.b ENSGT00530000064271 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.a.v.b ENSGT00940000164764.a.a ENSGT00940000165109.d ENSGT00940000157908.h.d ENSGT00940000157560.d.a.d ENSGT00950000182772.A.b ENSGT00940000160954.b ENSGT00940000154196.b.e.a ENSGT00940000155793.a.a.j ENSGT00550000074953.b ENSGT00940000165311.b.n.a.b.b Salmo ANCESTRAL SPECIES 37 ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000155704.bc.b ENSGT00940000157388.b.b.b ENSGT00530000064271 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.a.v.b ENSGT00940000164764.a.a ENSGT00940000165109.d ENSGT00940000157908.h.d ENSGT00940000157560.d.a.d ENSGT00950000182772.A.b ENSGT00940000160954.b ENSGT00940000154196.b.e.a ENSGT00940000155793.a.a.j ENSGT00550000074953.b ENSGT00940000165311.b.n.a.b.b River trout DUPLICATION River trout MODERN SPECIES 31 prkacab (ENSSTUG00000023658) ASF1B (ENSSTUG00000023620) crb3b (ENSSTUG00000023613) ENSSTUG00000023571 slc25a10b (ENSSTUG00000023530) ENSSTUG00000023518 ENSSTUG00000023515 ENSSTUG00000023506 ENSSTUG00000023492 ENSSTUG00000023489 ENSSTUG00000023483 ENSSTUG00000023473 ENSSTUG00000023463 ENSSTUG00000023410 ENSSTUG00000023399 ENSSTUG00000023372 ##22 ENSSTUG00000023359 ##22 EGLN1 (ENSSTUG00000023339) sipa1l2 (ENSSTUG00000022948) rrp36 (ENSSTUG00000022923) tmem264 (ENSSTUG00000022916) ENSSTUG00000021984 ENSSTUG00000021884 soul4 (ENSSTUG00000021853) ptk7a (ENSSTUG00000021011) MARK1 (ENSSTUG00000020607) ENSSTUG00000020578 TRAF5 (ENSSTUG00000020552) rcor3 (ENSSTUG00000020360) kcnh1b (ENSSTUG00000020055) PEX6 (ENSSTUG00000020005) River trout MODERN SPECIES 31 ASF1B (ENSSTUG00000023620) crb3b (ENSSTUG00000023613) ENSSTUG00000023571 slc25a10b (ENSSTUG00000023530) ENSSTUG00000023518 ENSSTUG00000023515 ENSSTUG00000023506 ENSSTUG00000023492 ENSSTUG00000023489 ENSSTUG00000023483 ENSSTUG00000023473 ENSSTUG00000023463 ENSSTUG00000023410 ENSSTUG00000023399 ENSSTUG00000023372 ##22 ENSSTUG00000023359 ##22 EGLN1 (ENSSTUG00000023339) sipa1l2 (ENSSTUG00000022948) rrp36 (ENSSTUG00000022923) tmem264 (ENSSTUG00000022916) ENSSTUG00000021984 ENSSTUG00000021884 soul4 (ENSSTUG00000021853) ptk7a (ENSSTUG00000021011) MARK1 (ENSSTUG00000020607) ENSSTUG00000020578 TRAF5 (ENSSTUG00000020552) rcor3 (ENSSTUG00000020360) kcnh1b (ENSSTUG00000020055) PEX6 (ENSSTUG00000020005) ENSSTUG00000019990 Atlantic salmon MODERN SPECIES 11 mlp3c (ENSSSAG00000049637) ENSSSAG00000096147 ENSSSAG00000046942 ENSSSAG00000046866 opn6a (ENSSSAG00000046862) ENSSSAG00000046626 ENSSSAG00000085838 ENSSSAG00000046528 spast (ENSSSAG00000044816) dpy30 (ENSSSAG00000044712) psen2 (ENSSSAG00000044602) s5a2 (ENSSSAG00000044549) jag1a (ENSSSAG00000043209) ENSSSAG00000043147 ENSSSAG00000111546 ENSSSAG00000042803 ##22 ENSSSAG00000081907 ENSSSAG00000041186 rrp36 (ENSSSAG00000041096) ENSSSAG00000037481 klc4 (ENSSSAG00000005429) soul4 (ENSSSAG00000099662) ptk7a (ENSSSAG00000004365) ENSSSAG00000002991 ENSSSAG00000081823 ENSSSAG00000002826 TRAF5 (ENSSSAG00000002812) rcor3 (ENSSSAG00000002310) KCNH1 (ENSSSAG00000002000) ENSSSAG00000001974 ENSSSAG00000001921 Oncorhynchus ANCESTRAL SPECIES 101 ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.b.b.b.a.a.b ENSGT00940000155965.b.e.b.b.a.b.a.a.a.a ENSGT00940000154308.D.c.a.b.a.a.a.a.b.a.a.b ENSGT00940000154308.D.c.a.b.a.a.a.a.b.a.a.a ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000155704.bc.b ENSGT00940000157388.b.b.b ENSGT00530000064271 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.a.v.b ENSGT00940000164764.a.a ENSGT00940000165109.d ENSGT00940000157908.h.d ENSGT00940000157560.d.a.d ENSGT00950000182772.A.b ENSGT00940000160954.b ENSGT00940000154196.b.e.a ENSGT00940000155793.a.a.j ENSGT00940000165311.b.n.a.b.b ENSGT00940000155129.B.i Rainbow trout MODERN SPECIES 4 ENSOMYG00000067914 ENSOMYG00000063475 ENSOMYG00000051522 ENSOMYG00000003633 ENSOMYG00000053530 ENSOMYG00000050602 ENSOMYG00000004628 ENSOMYG00000048994 ENSOMYG00000007410 ENSOMYG00000064882 ENSOMYG00000005517 ENSOMYG00000004668 ENSOMYG00000005568 ENSOMYG00000004651 ENSOMYG00000048553 ENSOMYG00000005769 ##22 ENSOMYG00000005737 ENSOMYG00000006521 ENSOMYG00000006945 ENSOMYG00000053828 ENSOMYG00000064456 ENSOMYG00000006968 ENSOMYG00000007562 ENSOMYG00000053772 ENSOMYG00000007845 soul4 (ENSOMYG00000007872) ptk7a (ENSOMYG00000008510) ENSOMYG00000060588 ENSOMYG00000055394 ENSOMYG00000009435 ENSOMYG00000009523 Oncorhynchus_a ANCESTRAL SPECIES 108 ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.b.b.b.a.a.b ENSGT00940000155965.b.e.b.b.a.b.a.a.a.a ENSGT00940000154308.D.c.a.b.a.a.a.a.b.a.a.b ENSGT00940000154308.D.c.a.b.a.a.a.a.b.a.a.a ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000155704.bc.b ENSGT00940000157388.b.b.b ENSGT00530000064271 ENSGT00390000003866.a.a.f ENSGT00950000183209.b.a.a.v.b ENSGT00940000164764.a.a ENSGT00940000165109.d ENSGT00940000157908.h.d ENSGT00940000157560.d.a.d ENSGT00950000182772.A.b ENSGT00940000160954.b ENSGT00940000154196.b.e.a ENSGT00940000155793.a.a.j ENSGT00940000165311.b.n.a.b.b ENSGT00940000155129.B.i Coho salmon MODERN SPECIES 12 ENSOKIG00005008008 ENSOKIG00005008022 ENSOKIG00005008039 ENSOKIG00005008057 ENSOKIG00005008098 ENSOKIG00005008122 ENSOKIG00005008130 ENSOKIG00005008133 ENSOKIG00005008142 ENSOKIG00005008151 ENSOKIG00005008158 ENSOKIG00005008174 ENSOKIG00005008187 ENSOKIG00005008195 ENSOKIG00005008223 ENSOKIG00005008228 ##22 EGLN1 (ENSOKIG00005008238) SIPA1L2 (ENSOKIG00005008310) rrp36 (ENSOKIG00005008622) tmem264 (ENSOKIG00005008637) ENSOKIG00005008795 ENSOKIG00005006007 soul4 (ENSOKIG00005006264) ptk7a (ENSOKIG00005006380) MARK1 (ENSOKIG00005008476) ENSOKIG00005008656 TRAF5 (ENSOKIG00005008668) rcor3 (ENSOKIG00005008711) KCNH1 (ENSOKIG00005008781) ENSOKIG00005008801 ENSOKIG00005008854 Chinook salmon MODERN SPECIES 137 PRR12 (ENSOTSG00005022710) irf3 (ENSOTSG00005022709) trpm4b.2 (ENSOTSG00005022707) ENSOTSG00005022705 ##22 EGLN1 (ENSOTSG00005022704) Huchen MODERN SPECIES 3034 ENSHHUG00000005555 ENSHHUG00000005549 ENSHHUG00000005545 ##22 EGLN1 (ENSHHUG00000005523) Northern pike MODERN SPECIES 8 ENSELUG00000017680 tpcn3 (ENSELUG00000017670) ENSELUG00000033076 tpcn3 (ENSELUG00000017586) ENSELUG00000017559 slc22a7a (ENSELUG00000017464) ENSELUG00000017447 kcnh1b (ENSELUG00000017368) rcor3 (ENSELUG00000017304) TRAF5 (ENSELUG00000017257) ENSELUG00000017232 ENSELUG00000017205 ENSELUG00000017198 MARK1 (ENSELUG00000017156) ENSELUG00000034072 ENSELUG00000017023 ##22 egln1 (ENSELUG00000016998) sipa1l2 (ENSELUG00000016909) rrp36 (ENSELUG00000016840) tmem264 (ENSELUG00000016822) ENSELUG00000016765 ENSELUG00000016543 soul4 (ENSELUG00000016467) ptk7a (ENSELUG00000016427) jag1a (ENSELUG00000016285) ENSELUG00000016145 srd5a2a (ENSELUG00000016118) psen2 (ENSELUG00000001236) dpy30 (ENSELUG00000016048) ENSELUG00000016063 spast (ENSELUG00000015998) Otomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Otophysi ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00940000156999 ENSGT00940000164412.a.a.b ENSGT00390000007683 ENSGT00390000014293.b ENSGT00570000079168.b.b.a.c ENSGT00730000112146 ENSGT00500000044923 ENSGT01050000244965.a.b ENSGT00940000154537.lb ENSGT00940000159235 ENSGT00940000159732.b ENSGT00940000156754.a.b.a ENSGT00610000086460 ENSGT00390000005203 ENSGT00940000155560.l.a ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 ENSGT00940000157814 ENSGT00940000165556.a.a ENSGT00390000008978 ENSGT00940000158482 ENSGT00940000157425.B ENSGT00730000111063.b ENSGT00940000164222 ENSGT01030000234641.a.b ENSGT00940000153430.a.b ENSGT00940000155493 ENSGT00940000165086.b ENSGT00510000047850.e ENSGT00510000047850.f ENSGT00940000158292.a.b ENSGT00940000160346.B.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1650 ENSGT00940000155560.l.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.b.c ##22 Goldfish DUPLICATION Goldfish MODERN SPECIES 3513 apcs (ENSCARG00000047141) ##22 Goldfish MODERN SPECIES 4 lgalslb (ENSCARG00000015958) sertad2b (ENSCARG00000015963) neurog3 (ENSCARG00000015979) pdlim1 (ENSCARG00000015982) rhoua (ENSCARG00000015988) tbp (ENSCARG00000015997) rab1ab (ENSCARG00000016129) slc1a4 (ENSCARG00000016231) sertad2b (ENSCARG00000016304) lgalslb (ENSCARG00000016307) hkdc1 (ENSCARG00000016341) zswim8 (ENSCARG00000017034) SYNPO2L (ENSCARG00000020147) myoz1a (ENSCARG00000020155) GFRA1 (ENSCARG00000020169) apcs (ENSCARG00000001933) ##22 ENSCARG00000001996 ENSCARG00000002110 ENSCARG00000002125 ENSCARG00000002145 tspan14 (ENSCARG00000002168) mxtx1 (ENSCARG00000002201) elovl6l (ENSCARG00000002207) ENSCARG00000002216 ENSCARG00000002221 chchd1 (ENSCARG00000002225) ENSCARG00000002232 zswim8 (ENSCARG00000002525) NDST2 (ENSCARG00000005474) ENSCARG00000006207 ENSCARG00000006492 Cyprininae_a ANCESTRAL SPECIES 979 ENSGT00940000155560.l.a.b ENSGT01100000263515.a.b.a.b.b.k.b.a.b.c ##22 Golden-line barbel MODERN SPECIES 1211 GFRA1 (ENSSGRG00000020109) apcs (ENSSGRG00000020107) ##22 Common carp reference MODERN SPECIES 18 ENSCCRG00000029136 chchd1 (ENSCCRG00000053347) ENSCCRG00000032147 ENSCCRG00000061667 ENSCCRG00000055029 elovl6l (ENSCCRG00000074063) mxtx1 (ENSCCRG00000031454) tspan14 (ENSCCRG00000031477) ENSCCRG00000034629 ENSCCRG00000055367 ENSCCRG00000065200 ENSCCRG00000079502 ENSCCRG00000058829 ENSCCRG00000013526 ENSCCRG00000038526 ENSCCRG00000014373 ##22 ENSCCRG00000081583 ENSCCRG00000053046 ENSCCRG00000045633 fam204a (ENSCCRG00000080309) ENSCCRG00000057436 emx2 (ENSCCRG00000064661) eif3s10 (ENSCCRG00000051850) dennd10 (ENSCCRG00000051871) sfxn4 (ENSCCRG00000078886) prdx3 (ENSCCRG00000062141) tm9sf3 (ENSCCRG00000026394) ENSCCRG00000051884 ENSCCRG00000035077 ENSCCRG00000061795 ENSCCRG00000056185 Cyprininae ANCESTRAL SPECIES 62 ENSGT00940000156999.d ENSGT00940000164412.a.a.b.o.b ENSGT00390000007683.b ENSGT00390000014293.b.b ENSGT00570000079168.b.b.a.c.b ENSGT01030000236132.b ENSGT00500000044923.a ENSGT01050000244965.a.b.i ENSGT00940000154537.lb.a ENSGT00940000159235.c.a ENSGT00940000159732.b.b ENSGT00940000156754.a.b.a.b ENSGT00610000086460 ENSGT00390000005203 ENSGT00940000155560.l.a.a ENSGT01100000263515.a.b.a.b.b.k.b.a.b.d ##22 ENSGT00940000155790.d ENSGT00940000157814.x.b ENSGT00940000165556.a.a ENSGT00390000008978.cb ENSGT00940000158482.d ENSGT00940000157425.B ENSGT00730000111063.b.a ENSGT00940000164222.b ENSGT01030000234641.a.b.a ENSGT00940000153430.a.b.b ENSGT00940000155493.i ENSGT00940000165086.b.g.b ENSGT00510000047850.f.a ENSGT00940000158292.a.b.b.a.a ENSGT00940000160346.B.f.a Cyprininae_a ANCESTRAL SPECIES 32 ENSGT00940000164412.a.a.b.o.a ENSGT00390000007683.a ENSGT00390000014293.b.a ENSGT00570000079168.b.b.a.c.a ENSGT00730000112146 ENSGT00500000044923.b ENSGT01050000244965.a.b.j ENSGT00940000154537.lb.b ENSGT00940000159235.c.b ENSGT00940000159732.b.a ENSGT00940000156754.a.b.a.a.d ENSGT00940000156754.a.b.a.b ENSGT00610000086460 ENSGT00390000005203 ENSGT00940000155560.l.a.a ENSGT01100000263515.a.b.a.b.b.k.b.a.b.d ##22 ENSGT00940000155790.d ENSGT00940000157814.x.b ENSGT00940000165556.a.a ENSGT00390000008978.cb ENSGT00940000158482.d ENSGT00940000157425.B.a ENSGT00730000111063.b.a ENSGT00940000164222.b ENSGT01030000234641.a.b.a ENSGT00940000153430.a.b.b ENSGT00940000155493.i ENSGT00940000165086.b.g.b ENSGT00510000047850.f.a ENSGT00940000158292.a.b.b.a.a ENSGT00940000160346.B.f.a Golden-line barbel MODERN SPECIES 625 ENSSGRG00000048203 ENSSGRG00000048201 ENSSGRG00000048199 ENSSGRG00000048197 rpl32 (ENSSGRG00000048191) cand2 (ENSSGRG00000047838) sec13 (ENSSGRG00000047704) ENSSGRG00000047700 si:ch1073-126c3.2 (ENSSGRG00000047696) ENSSGRG00000047695 gfra1a (ENSSGRG00000047693) apcs (ENSSGRG00000047689) ##22 Common carp reference MODERN SPECIES 48 ENSCCRG00000029112 chchd1 (ENSCCRG00000072015) ENSCCRG00000029130 ENSCCRG00000029146 ENSCCRG00000070292 mtg1 (ENSCCRG00000029152) elovl6l (ENSCCRG00000029185) mxtx1 (ENSCCRG00000029190) tspan14 (ENSCCRG00000053532) ENSCCRG00000029204 ENSCCRG00000076307 ENSCCRG00000080747 si:ch1073-126c3.2 (ENSCCRG00000078682) CCDC172 (ENSCCRG00000011866) GFRA1 (ENSCCRG00000014326) apcs (ENSCCRG00000041681) ##22 ATRNL1 (ENSCCRG00000030528) ENSCCRG00000011525 ENSCCRG00000082057 fam204a (ENSCCRG00000076067) ENSCCRG00000072504 emx2 (ENSCCRG00000070882) eif3s10 (ENSCCRG00000034932) dennd10 (ENSCCRG00000026313) sfxn4 (ENSCCRG00000026322) prdx3 (ENSCCRG00000072654) tm9sf3 (ENSCCRG00000051877) ENSCCRG00000026483 SRBD1 (ENSCCRG00000080746) six2a (ENSCCRG00000056976) six3a (ENSCCRG00000074911) Goldfish MODERN SPECIES 31 tlr4bb (ENSCARG00000026423) zgc:154058 (ENSCARG00000026420) mat1a (ENSCARG00000025440) ENSCARG00000025394 selenou1a (ENSCARG00000025375) sfxn3 (ENSCARG00000025335) ENSCARG00000025323 pdzd7a (ENSCARG00000025314) lzts2a (ENSCARG00000025309) SEMA4G (ENSCARG00000024580) ENSCARG00000024538 hk1 (ENSCARG00000024100) tacr2 (ENSCARG00000024065) tspan15 (ENSCARG00000024027) GFRA1 (ENSCARG00000023905) apcs (ENSCARG00000023890) ##22 ATRNL1 (ENSCARG00000023570) ENSCARG00000023475 ENSCARG00000023470 fam204a (ENSCARG00000023465) RAB11FIP2 (ENSCARG00000023456) eif3s10 (ENSCARG00000023366) dennd10 (ENSCARG00000023306) sfxn4 (ENSCARG00000023240) prdx3 (ENSCARG00000023198) tm9sf3 (ENSCARG00000022629) ENSCARG00000022582 SRBD1 (ENSCARG00000022306) six2a (ENSCARG00000022266) six3a (ENSCARG00000022254) CAMKMT (ENSCARG00000022218) Zebrafish MODERN SPECIES 4 NDST2 (ENSDARG00000086269) zswim8 (ENSDARG00000069397) ENSDARG00000030967 chchd1 (ENSDARG00000029100) ENSDARG00000056080 ENSDARG00000104084 sprn (ENSDARG00000056004) mtg1 (ENSDARG00000069386) elovl6l (ENSDARG00000038639) mxtx1 (ENSDARG00000069382) tspan14 (ENSDARG00000055938) SH2D4B (ENSDARG00000069374) si:ch1073-126c3.2 (ENSDARG00000092858) CCDC172 (ENSDARG00000039937) gfra1a (ENSDARG00000099732) apcs (ENSDARG00000045089) ##22 ATRNL1 (ENSDARG00000077188) ENSDARG00000106606 fam204a (ENSDARG00000039699) RAB11FIP2 (ENSDARG00000101432) emx2 (ENSDARG00000039701) eif3s10 (ENSDARG00000076815) lzts2a (ENSDARG00000074597) pdzd7a (ENSDARG00000076974) sfxn3 (ENSDARG00000057374) selenou1a (ENSDARG00000057378) mat1a (ENSDARG00000039605) zgc:154058 (ENSDARG00000069795) ENSDARG00000078254 tlr4bb (ENSDARG00000022048) ENSDARG00000112942 Clupeiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 5 snap23.1 (ENSCHAG00000007873) sptb (ENSCHAG00000007935) ENSCHAG00000010130 ENSCHAG00000010141 ENSCHAG00000010218 MDGA1 (ENSCHAG00000010480) zfand3 (ENSCHAG00000010833) zfand3 (ENSCHAG00000010878) ENSCHAG00000010901 ##22 ENSCHAG00000010927 ##22 ENSCHAG00000010953 DTD2 (ENSCHAG00000010998) HEATR5A (ENSCHAG00000011033) hectd1 (ENSCHAG00000011579) ENSCHAG00000011624 ENSCHAG00000011633 ##22 strn3 (ENSCHAG00000011679) coch (ENSCHAG00000011736) opn6b (ENSCHAG00000011791) scfd1 (ENSCHAG00000011830) g2e3 (ENSCHAG00000012040) PRKD1 (ENSCHAG00000012200) foxg1a (ENSCHAG00000013146) ENSCHAG00000013151 ENSCHAG00000013761 ehd4 (ENSCHAG00000013785) traf3 (ENSCHAG00000013815) rcor1 (ENSCHAG00000013944) ankrd9 (ENSCHAG00000013962) tecpr2 (ENSCHAG00000013975) ENSCHAG00000014043 Atlantic herring MODERN SPECIES 5 ENSCHAG00000013151 foxg1a (ENSCHAG00000013146) PRKD1 (ENSCHAG00000012200) g2e3 (ENSCHAG00000012040) scfd1 (ENSCHAG00000011830) opn6b (ENSCHAG00000011791) coch (ENSCHAG00000011736) strn3 (ENSCHAG00000011679) ENSCHAG00000011633 ##22 ENSCHAG00000011624 hectd1 (ENSCHAG00000011579) HEATR5A (ENSCHAG00000011033) DTD2 (ENSCHAG00000010998) ENSCHAG00000010953 ENSCHAG00000010927 ##22 ENSCHAG00000010901 ##22 zfand3 (ENSCHAG00000010878) zfand3 (ENSCHAG00000010833) MDGA1 (ENSCHAG00000010480) ENSCHAG00000010218 ENSCHAG00000010141 ENSCHAG00000010130 sptb (ENSCHAG00000007935) snap23.1 (ENSCHAG00000007873) ENSCHAG00000007837 pth2 (ENSCHAG00000007827) TMEM121 (ENSCHAG00000007824) ENSCHAG00000007802 dnal1 (ENSCHAG00000007788) ENSCHAG00000007759 ENSCHAG00000007733 Atlantic herring MODERN SPECIES 5 ENSCHAG00000013761 ENSCHAG00000013151 foxg1a (ENSCHAG00000013146) PRKD1 (ENSCHAG00000012200) g2e3 (ENSCHAG00000012040) scfd1 (ENSCHAG00000011830) opn6b (ENSCHAG00000011791) coch (ENSCHAG00000011736) strn3 (ENSCHAG00000011679) ENSCHAG00000011633 ##22 ENSCHAG00000011624 hectd1 (ENSCHAG00000011579) HEATR5A (ENSCHAG00000011033) DTD2 (ENSCHAG00000010998) ENSCHAG00000010953 ENSCHAG00000010927 ##22 ENSCHAG00000010901 ##22 zfand3 (ENSCHAG00000010878) zfand3 (ENSCHAG00000010833) MDGA1 (ENSCHAG00000010480) ENSCHAG00000010218 ENSCHAG00000010141 ENSCHAG00000010130 sptb (ENSCHAG00000007935) snap23.1 (ENSCHAG00000007873) ENSCHAG00000007837 pth2 (ENSCHAG00000007827) TMEM121 (ENSCHAG00000007824) ENSCHAG00000007802 dnal1 (ENSCHAG00000007788) ENSCHAG00000007759 Atlantic herring MODERN SPECIES 24 ENSCHAG00000019821 cldn30 (ENSCHAG00000019839) mettl27 (ENSCHAG00000019852) nf2b (ENSCHAG00000019871) nccrp1 (ENSCHAG00000020317) ckma (ENSCHAG00000020329) MARK4 (ENSCHAG00000020370) HAND1 (ENSCHAG00000020571) sap30l (ENSCHAG00000020577) GALNT10 (ENSCHAG00000020603) ENSCHAG00000021015 abhd11 (ENSCHAG00000021850) GRM5 (ENSCHAG00000021920) RAB38 (ENSCHAG00000021932) tmem135 (ENSCHAG00000021938) ENSCHAG00000021982 ##22 HEPH (ENSCHAG00000021997) slc43a2b (ENSCHAG00000022549) PITPNA (ENSCHAG00000023894) INPP5K (ENSCHAG00000023940) ENSCHAG00000023967 nle1 (ENSCHAG00000023974) ENSCHAG00000024090 slc25a1a (ENSCHAG00000024094) mtnr1bb (ENSCHAG00000024115) ENSCHAG00000000845 ENSCHAG00000000864 ENSCHAG00000000886 ENSCHAG00000000916 mrpl22 (ENSCHAG00000000963) ENSCHAG00000001299 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 5 cox16 (ENSCHAG00000011393) ENSCHAG00000011402 ENSCHAG00000011445 dtd2 (ENSCHAG00000011458) nubpl (ENSCHAG00000011472) ##11 ARHGAP5 (ENSCHAG00000011757) ENSCHAG00000011769 AKAP6 (ENSCHAG00000011795) NPAS3 (ENSCHAG00000012520) egln3 (ENSCHAG00000012832) ENSCHAG00000012873 cfl2 (ENSCHAG00000013119) sec23a (ENSCHAG00000013137) ENSCHAG00000013186 ##22 ENSCHAG00000013201 ##22 ENSCHAG00000013228 ##22 clec14a (ENSCHAG00000013237) SSTR1 (ENSCHAG00000013244) ENSCHAG00000013255 foxa1 (ENSCHAG00000013294) mipol1 (ENSCHAG00000013310) psma3 (ENSCHAG00000013320) arid4a (ENSCHAG00000013560) timm9 (ENSCHAG00000015077) si:ch211-185a18.2 (ENSCHAG00000015118) dact1 (ENSCHAG00000015231) lgals3b (ENSCHAG00000015244) fbxo34 (ENSCHAG00000015257) atg14 (ENSCHAG00000015278) tbpl2 (ENSCHAG00000015292) jmjd7 (ENSCHAG00000015303) Atlantic herring MODERN SPECIES 5 dcaf5 (ENSCHAG00000007730) actn1 (ENSCHAG00000007871) cox16 (ENSCHAG00000011393) ENSCHAG00000011402 ENSCHAG00000011445 dtd2 (ENSCHAG00000011458) nubpl (ENSCHAG00000011472) ##11 ARHGAP5 (ENSCHAG00000011757) ENSCHAG00000011769 AKAP6 (ENSCHAG00000011795) NPAS3 (ENSCHAG00000012520) egln3 (ENSCHAG00000012832) ENSCHAG00000012873 cfl2 (ENSCHAG00000013119) sec23a (ENSCHAG00000013137) ENSCHAG00000013186 ##22 ENSCHAG00000013201 ##22 ENSCHAG00000013228 ##22 clec14a (ENSCHAG00000013237) SSTR1 (ENSCHAG00000013244) ENSCHAG00000013255 foxa1 (ENSCHAG00000013294) mipol1 (ENSCHAG00000013310) psma3 (ENSCHAG00000013320) arid4a (ENSCHAG00000013560) timm9 (ENSCHAG00000015077) si:ch211-185a18.2 (ENSCHAG00000015118) dact1 (ENSCHAG00000015231) lgals3b (ENSCHAG00000015244) fbxo34 (ENSCHAG00000015257) atg14 (ENSCHAG00000015278) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 19 GCNT3 (ENSCHAG00000009453) cox5aa (ENSCHAG00000009364) arid3b (ENSCHAG00000009345) edc3 (ENSCHAG00000009321) ENSCHAG00000009313 CPLX3 (ENSCHAG00000009298) adal (ENSCHAG00000009261) pdp2 (ENSCHAG00000009248) ENSCHAG00000009239 ENSCHAG00000009233 ENSCHAG00000009202 arf5 (ENSCHAG00000009143) zgc:77752 (ENSCHAG00000009109) ODF3 (ENSCHAG00000009083) rabl2 (ENSCHAG00000008855) ENSCHAG00000008836 ##22 SHANK3 (ENSCHAG00000008521) ENSCHAG00000008475 ENSCHAG00000008453 arsa (ENSCHAG00000008434) ENSCHAG00000008419 ENSCHAG00000008273 PGC (ENSCHAG00000008073) ENSCHAG00000007749 PGC (ENSCHAG00000007588) chkb (ENSCHAG00000007514) ENSCHAG00000007491 cpt1b (ENSCHAG00000006435) pgghg (ENSCHAG00000006286) ENSCHAG00000006277 ENSCHAG00000006247 Atlantic herring MODERN SPECIES 5 actn1 (ENSCHAG00000007871) cox16 (ENSCHAG00000011393) ENSCHAG00000011402 ENSCHAG00000011445 dtd2 (ENSCHAG00000011458) nubpl (ENSCHAG00000011472) ##11 ARHGAP5 (ENSCHAG00000011757) ENSCHAG00000011769 AKAP6 (ENSCHAG00000011795) NPAS3 (ENSCHAG00000012520) egln3 (ENSCHAG00000012832) ENSCHAG00000012873 cfl2 (ENSCHAG00000013119) sec23a (ENSCHAG00000013137) ENSCHAG00000013186 ##22 ENSCHAG00000013201 ##22 ENSCHAG00000013228 ##22 clec14a (ENSCHAG00000013237) SSTR1 (ENSCHAG00000013244) ENSCHAG00000013255 foxa1 (ENSCHAG00000013294) mipol1 (ENSCHAG00000013310) psma3 (ENSCHAG00000013320) arid4a (ENSCHAG00000013560) timm9 (ENSCHAG00000015077) si:ch211-185a18.2 (ENSCHAG00000015118) dact1 (ENSCHAG00000015231) lgals3b (ENSCHAG00000015244) fbxo34 (ENSCHAG00000015257) atg14 (ENSCHAG00000015278) tbpl2 (ENSCHAG00000015292) Atlantic herring MODERN SPECIES 16 ENSCHAG00000019908 MFAP4 (ENSCHAG00000019787) MFAP4 (ENSCHAG00000019775) rbm34 (ENSCHAG00000019673) tbce (ENSCHAG00000019657) NID1 (ENSCHAG00000018896) ENSCHAG00000018859 ero1b (ENSCHAG00000018099) ENSCHAG00000018045 ##22 ENSCHAG00000018039 ##22 ENSCHAG00000018027 ENSCHAG00000018017 ENSCHAG00000018007 ENSCHAG00000017998 ctrl (ENSCHAG00000017968) ENSCHAG00000017940 ##22 ENSCHAG00000017915 ENSCHAG00000017905 crtac1a (ENSCHAG00000017109) ENSCHAG00000017046 PNPLA6 (ENSCHAG00000012074) ENSCHAG00000011950 caly (ENSCHAG00000011941) MFAP4 (ENSCHAG00000011820) ENSCHAG00000011808 ENSCHAG00000011594 ENSCHAG00000008187 ENSCHAG00000008079 cfap58 (ENSCHAG00000007998) neurl1aa (ENSCHAG00000007932) slkb (ENSCHAG00000006522) Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 16 ENSCHAG00000011808 MFAP4 (ENSCHAG00000011820) caly (ENSCHAG00000011941) ENSCHAG00000011950 PNPLA6 (ENSCHAG00000012074) ENSCHAG00000017046 crtac1a (ENSCHAG00000017109) ENSCHAG00000017905 ENSCHAG00000017915 ENSCHAG00000017940 ##22 ctrl (ENSCHAG00000017968) ENSCHAG00000017998 ENSCHAG00000018007 ENSCHAG00000018017 ENSCHAG00000018027 ENSCHAG00000018039 ##22 ENSCHAG00000018045 ##22 ero1b (ENSCHAG00000018099) ENSCHAG00000018859 NID1 (ENSCHAG00000018896) tbce (ENSCHAG00000019657) rbm34 (ENSCHAG00000019673) MFAP4 (ENSCHAG00000019775) MFAP4 (ENSCHAG00000019787) ENSCHAG00000019908 ENSCHAG00000020286 irf2bp2b (ENSCHAG00000020339) map1lc3c (ENSCHAG00000020353) strn (ENSCHAG00000020390) opn6a (ENSCHAG00000020990) ENSCHAG00000020998 Atlantic herring MODERN SPECIES 16 ENSCHAG00000004623 ENSCHAG00000004606 PIP4K2B (ENSCHAG00000003504) psmb3 (ENSCHAG00000003412) ENSCHAG00000003383 scrn2 (ENSCHAG00000003349) ENSCHAG00000003296 ENSCHAG00000003266 ENSCHAG00000003180 ENSCHAG00000003144 ENSCHAG00000003117 ENSCHAG00000003068 ENSCHAG00000003027 ENSCHAG00000003006 ENSCHAG00000002944 ENSCHAG00000002889 ##22 ENSCHAG00000002792 ##22 ENSCHAG00000002729 ENSCHAG00000002644 ENSCHAG00000002588 ENSCHAG00000021616 ENSCHAG00000021593 ENSCHAG00000021578 cdc6 (ENSCHAG00000021488) ENSCHAG00000021481 ENSCHAG00000021468 ENSCHAG00000021257 PLA2G12B (ENSCHAG00000021240) mettl26 (ENSCHAG00000021230) wfikkn1 (ENSCHAG00000021214) GSG1L (ENSCHAG00000021209) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 16 MFAP4 (ENSCHAG00000011820) caly (ENSCHAG00000011941) ENSCHAG00000011950 PNPLA6 (ENSCHAG00000012074) ENSCHAG00000017046 crtac1a (ENSCHAG00000017109) ENSCHAG00000017905 ENSCHAG00000017915 ENSCHAG00000017940 ##22 ctrl (ENSCHAG00000017968) ENSCHAG00000017998 ENSCHAG00000018007 ENSCHAG00000018017 ENSCHAG00000018027 ENSCHAG00000018039 ##22 ENSCHAG00000018045 ##22 ero1b (ENSCHAG00000018099) ENSCHAG00000018859 NID1 (ENSCHAG00000018896) tbce (ENSCHAG00000019657) rbm34 (ENSCHAG00000019673) MFAP4 (ENSCHAG00000019775) MFAP4 (ENSCHAG00000019787) ENSCHAG00000019908 ENSCHAG00000020286 irf2bp2b (ENSCHAG00000020339) map1lc3c (ENSCHAG00000020353) strn (ENSCHAG00000020390) opn6a (ENSCHAG00000020990) ENSCHAG00000020998 ttyh3b (ENSCHAG00000021123) Atlantic herring MODERN SPECIES 16 ENSCHAG00000004606 PIP4K2B (ENSCHAG00000003504) psmb3 (ENSCHAG00000003412) ENSCHAG00000003383 scrn2 (ENSCHAG00000003349) ENSCHAG00000003296 ENSCHAG00000003266 ENSCHAG00000003180 ENSCHAG00000003144 ENSCHAG00000003117 ENSCHAG00000003068 ENSCHAG00000003027 ENSCHAG00000003006 ENSCHAG00000002944 ENSCHAG00000002889 ##22 ENSCHAG00000002792 ##22 ENSCHAG00000002729 ENSCHAG00000002644 ENSCHAG00000002588 ENSCHAG00000021616 ENSCHAG00000021593 ENSCHAG00000021578 cdc6 (ENSCHAG00000021488) ENSCHAG00000021481 ENSCHAG00000021468 ENSCHAG00000021257 PLA2G12B (ENSCHAG00000021240) mettl26 (ENSCHAG00000021230) wfikkn1 (ENSCHAG00000021214) GSG1L (ENSCHAG00000021209) ENSCHAG00000021101 Osteoglossiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.a.b ##22 Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 19 mrpl2 (ENSSFOG00015007767) ENSSFOG00015007832 tmem264 (ENSSFOG00015025015) npas4l (ENSSFOG00015031579) KLHDC3 (ENSSFOG00015007914) ENSSFOG00015033096 ENSSFOG00015007956 ntpcr (ENSSFOG00015008076) ENSSFOG00015008106 sipa1l2 (ENSSFOG00015008146) ENSSFOG00015008238 tsnax (ENSSFOG00015008267) EGLN1 (ENSSFOG00015033222) ENSSFOG00015027324 ##22 ENSSFOG00015008368 ##22 ENSSFOG00015026733 ##22 ENSSFOG00015008426 ##22 ENSSFOG00015008415 ##22 ENSSFOG00015027366 GPR137B (ENSSFOG00015033172) NID1 (ENSSFOG00015008535) LYST (ENSSFOG00015008595) B3GALNT2 (ENSSFOG00015008799) ENSSFOG00015008912 ENSSFOG00015032077 ENSSFOG00015008923 irf2bp2a (ENSSFOG00015028165) ENSSFOG00015008934 ENSSFOG00015008967 ENSSFOG00015008993 gpatch11 (ENSSFOG00015009032) Asian bonytongue MODERN SPECIES 19 ENSSFOG00015007795 mrpl2 (ENSSFOG00015007767) ENSSFOG00015007832 tmem264 (ENSSFOG00015025015) npas4l (ENSSFOG00015031579) KLHDC3 (ENSSFOG00015007914) ENSSFOG00015033096 ENSSFOG00015007956 ntpcr (ENSSFOG00015008076) ENSSFOG00015008106 sipa1l2 (ENSSFOG00015008146) ENSSFOG00015008238 tsnax (ENSSFOG00015008267) EGLN1 (ENSSFOG00015033222) ENSSFOG00015027324 ##22 ENSSFOG00015008368 ##22 ENSSFOG00015026733 ##22 ENSSFOG00015008426 ##22 ENSSFOG00015008415 ##22 ENSSFOG00015027366 GPR137B (ENSSFOG00015033172) NID1 (ENSSFOG00015008535) LYST (ENSSFOG00015008595) B3GALNT2 (ENSSFOG00015008799) ENSSFOG00015008912 ENSSFOG00015032077 ENSSFOG00015008923 irf2bp2a (ENSSFOG00015028165) ENSSFOG00015008934 ENSSFOG00015008967 ENSSFOG00015008993 Asian bonytongue MODERN SPECIES 19 ENSSFOG00015007712 ENSSFOG00015007795 mrpl2 (ENSSFOG00015007767) ENSSFOG00015007832 tmem264 (ENSSFOG00015025015) npas4l (ENSSFOG00015031579) KLHDC3 (ENSSFOG00015007914) ENSSFOG00015033096 ENSSFOG00015007956 ntpcr (ENSSFOG00015008076) ENSSFOG00015008106 sipa1l2 (ENSSFOG00015008146) ENSSFOG00015008238 tsnax (ENSSFOG00015008267) EGLN1 (ENSSFOG00015033222) ENSSFOG00015027324 ##22 ENSSFOG00015008368 ##22 ENSSFOG00015026733 ##22 ENSSFOG00015008426 ##22 ENSSFOG00015008415 ##22 ENSSFOG00015027366 GPR137B (ENSSFOG00015033172) NID1 (ENSSFOG00015008535) LYST (ENSSFOG00015008595) B3GALNT2 (ENSSFOG00015008799) ENSSFOG00015008912 ENSSFOG00015032077 ENSSFOG00015008923 irf2bp2a (ENSSFOG00015028165) ENSSFOG00015008934 ENSSFOG00015008967 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 19 tmem264 (ENSSFOG00015025015) npas4l (ENSSFOG00015031579) KLHDC3 (ENSSFOG00015007914) ENSSFOG00015033096 ENSSFOG00015007956 ntpcr (ENSSFOG00015008076) ENSSFOG00015008106 sipa1l2 (ENSSFOG00015008146) ENSSFOG00015008238 tsnax (ENSSFOG00015008267) EGLN1 (ENSSFOG00015033222) ENSSFOG00015027324 ##22 ENSSFOG00015008368 ##22 ENSSFOG00015026733 ##22 ENSSFOG00015008426 ##22 ENSSFOG00015008415 ##22 ENSSFOG00015027366 GPR137B (ENSSFOG00015033172) NID1 (ENSSFOG00015008535) LYST (ENSSFOG00015008595) B3GALNT2 (ENSSFOG00015008799) ENSSFOG00015008912 ENSSFOG00015032077 ENSSFOG00015008923 irf2bp2a (ENSSFOG00015028165) ENSSFOG00015008934 ENSSFOG00015008967 ENSSFOG00015008993 gpatch11 (ENSSFOG00015009032) HEATR5B (ENSSFOG00015009081) strn (ENSSFOG00015000281) Asian bonytongue MODERN SPECIES 19 ENSSFOG00015007832 tmem264 (ENSSFOG00015025015) npas4l (ENSSFOG00015031579) KLHDC3 (ENSSFOG00015007914) ENSSFOG00015033096 ENSSFOG00015007956 ntpcr (ENSSFOG00015008076) ENSSFOG00015008106 sipa1l2 (ENSSFOG00015008146) ENSSFOG00015008238 tsnax (ENSSFOG00015008267) EGLN1 (ENSSFOG00015033222) ENSSFOG00015027324 ##22 ENSSFOG00015008368 ##22 ENSSFOG00015026733 ##22 ENSSFOG00015008426 ##22 ENSSFOG00015008415 ##22 ENSSFOG00015027366 GPR137B (ENSSFOG00015033172) NID1 (ENSSFOG00015008535) LYST (ENSSFOG00015008595) B3GALNT2 (ENSSFOG00015008799) ENSSFOG00015008912 ENSSFOG00015032077 ENSSFOG00015008923 irf2bp2a (ENSSFOG00015028165) ENSSFOG00015008934 ENSSFOG00015008967 ENSSFOG00015008993 gpatch11 (ENSSFOG00015009032) HEATR5B (ENSSFOG00015009081) Asian bonytongue MODERN SPECIES 2 ENSSFOG00015006537 cd276 (ENSSFOG00015006514) insyn1 (ENSSFOG00015029092) loxl1 (ENSSFOG00015006457) SCAMP5 (ENSSFOG00015026115) IGDCC4 (ENSSFOG00015029172) IGDCC3 (ENSSFOG00015006357) cilp (ENSSFOG00015006347) slc5a12 (ENSSFOG00015006291) ENSSFOG00015006270 agbl2 (ENSSFOG00015006250) ENSSFOG00015006192 pex16 (ENSSFOG00015006166) large2 (ENSSFOG00015006104) large2 (ENSSFOG00015006066) ENSSFOG00015006056 ##22 dhcr7 (ENSSFOG00015006035) nadsyn1 (ENSSFOG00015005980) tpcn2 (ENSSFOG00015005933) ENSSFOG00015030802 ccnd1 (ENSSFOG00015005911) lto1 (ENSSFOG00015027132) fgf19 (ENSSFOG00015005865) ENSSFOG00015026779 fgf4 (ENSSFOG00015011876) FGF3 (ENSSFOG00015005700) ANO1 (ENSSFOG00015005616) FADD (ENSSFOG00015032079) ppfia1 (ENSSFOG00015005328) CTTN (ENSSFOG00015005291) shank2b (ENSSFOG00015005229) Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Otomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Clupeiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 4 eef1akmt2 (ENSCHAG00000001839) FAM53B (ENSCHAG00000001877) nkx1.2la (ENSCHAG00000002007) prkg1a (ENSCHAG00000002051) dkk1a (ENSCHAG00000002273) pcdh15a (ENSCHAG00000002607) ENSCHAG00000007358 ENSCHAG00000007528 ENSCHAG00000007537 ENSCHAG00000007550 ENSCHAG00000007566 ENSCHAG00000007582 ENSCHAG00000007589 cisd1 (ENSCHAG00000007599) ctbp2a (ENSCHAG00000007630) ENSCHAG00000007876 ##22 ENSCHAG00000007902 ##22 fkbp6 (ENSCHAG00000007909) ENSCHAG00000007915 GPR137B (ENSCHAG00000007929) NID1 (ENSCHAG00000008235) LYST (ENSCHAG00000009851) GNG4 (ENSCHAG00000010455) b3galnt2 (ENSCHAG00000010483) ggps1 (ENSCHAG00000010643) ARID4B (ENSCHAG00000010662) tomm20a (ENSCHAG00000010753) irf2bp2a (ENSCHAG00000010851) pkz (ENSCHAG00000010896) eif2ak2 (ENSCHAG00000011002) gpatch11 (ENSCHAG00000011023) Atlantic herring MODERN SPECIES 4 FAM53B (ENSCHAG00000001877) nkx1.2la (ENSCHAG00000002007) prkg1a (ENSCHAG00000002051) dkk1a (ENSCHAG00000002273) pcdh15a (ENSCHAG00000002607) ENSCHAG00000007358 ENSCHAG00000007528 ENSCHAG00000007537 ENSCHAG00000007550 ENSCHAG00000007566 ENSCHAG00000007582 ENSCHAG00000007589 cisd1 (ENSCHAG00000007599) ctbp2a (ENSCHAG00000007630) ENSCHAG00000007876 ##22 ENSCHAG00000007902 ##22 fkbp6 (ENSCHAG00000007909) ENSCHAG00000007915 GPR137B (ENSCHAG00000007929) NID1 (ENSCHAG00000008235) LYST (ENSCHAG00000009851) GNG4 (ENSCHAG00000010455) b3galnt2 (ENSCHAG00000010483) ggps1 (ENSCHAG00000010643) ARID4B (ENSCHAG00000010662) tomm20a (ENSCHAG00000010753) irf2bp2a (ENSCHAG00000010851) pkz (ENSCHAG00000010896) eif2ak2 (ENSCHAG00000011002) gpatch11 (ENSCHAG00000011023) HEATR5B (ENSCHAG00000011196) Denticle herring MODERN SPECIES 18 PPP1R9B (ENSDCDG00000032232) ENSDCDG00000032263 col1a1b (ENSDCDG00000032291) retsatl (ENSDCDG00000033184) gngt2b (ENSDCDG00000033192) TMEM101 (ENSDCDG00000033195) lsm12b (ENSDCDG00000033199) g6pc3 (ENSDCDG00000033201) TANC2 (ENSDCDG00000033212) WNK4 (ENSDCDG00000033269) coa3a (ENSDCDG00000033271) ENSDCDG00000033273 plekhm1 (ENSDCDG00000033275) ENSDCDG00000033277 ENSDCDG00000033279 ENSDCDG00000033282 ##22 GPR137B (ENSDCDG00000033285) NID1 (ENSDCDG00000033307) GNG4 (ENSDCDG00000033467) b3galnt2 (ENSDCDG00000033468) ggps1 (ENSDCDG00000033469) ARID4B (ENSDCDG00000033474) tomm20a (ENSDCDG00000033481) irf2bp2a (ENSDCDG00000033484) ENSDCDG00000033487 pdpk1b (ENSDCDG00000033529) tsr3 (ENSDCDG00000033490) #28 gnptg (ENSDCDG00000033818) #27 stat5b (ENSDCDG00000033827) ENSDCDG00000033845 ENSDCDG00000033851 Otophysi ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Characiphysae ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.k.b.b ##22 Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 18 gtf2f2a (ENSIPUG00000024249) tpt1 (ENSIPUG00000024253) zgc:172122 (ENSIPUG00000024257) ENSIPUG00000024259 ENSIPUG00000024263 ENSIPUG00000024265 BEST2 (ENSIPUG00000024266) asna1 (ENSIPUG00000024268) rnf11a (ENSIPUG00000024270) NFIX (ENSIPUG00000024283) ENSIPUG00000024286 dand5 (ENSIPUG00000024287) junb (ENSIPUG00000024288) PRDX1 (ENSIPUG00000024290) ENSIPUG00000024292 ##22 ENSIPUG00000024296 ##22 ctsh (ENSIPUG00000024294) ENSIPUG00000024298 ##22 rnaseh2a (ENSIPUG00000024299) snrpb2 (ENSIPUG00000024300) prokr1a (ENSIPUG00000024305) aplf (ENSIPUG00000024306) fbxo48 (ENSIPUG00000024307) Cnrip1 (ENSIPUG00000024308) Ppp3r1 (ENSIPUG00000024309) etaa1 (ENSIPUG00000024335) MEIS1 (ENSIPUG00000024342) SPRED2 (ENSIPUG00000024350) actr2a (ENSIPUG00000024353) atg4d (ENSIPUG00000024357) MAST1 (ENSIPUG00000024360) Channel catfish MODERN SPECIES 18 gpalpp1 (ENSIPUG00000024248) gtf2f2a (ENSIPUG00000024249) tpt1 (ENSIPUG00000024253) zgc:172122 (ENSIPUG00000024257) ENSIPUG00000024259 ENSIPUG00000024263 ENSIPUG00000024265 BEST2 (ENSIPUG00000024266) asna1 (ENSIPUG00000024268) rnf11a (ENSIPUG00000024270) NFIX (ENSIPUG00000024283) ENSIPUG00000024286 dand5 (ENSIPUG00000024287) junb (ENSIPUG00000024288) PRDX1 (ENSIPUG00000024290) ENSIPUG00000024292 ##22 ENSIPUG00000024296 ##22 ctsh (ENSIPUG00000024294) ENSIPUG00000024298 ##22 rnaseh2a (ENSIPUG00000024299) snrpb2 (ENSIPUG00000024300) prokr1a (ENSIPUG00000024305) aplf (ENSIPUG00000024306) fbxo48 (ENSIPUG00000024307) Cnrip1 (ENSIPUG00000024308) Ppp3r1 (ENSIPUG00000024309) etaa1 (ENSIPUG00000024335) MEIS1 (ENSIPUG00000024342) SPRED2 (ENSIPUG00000024350) actr2a (ENSIPUG00000024353) atg4d (ENSIPUG00000024357) Channel catfish MODERN SPECIES 18 zgc:172122 (ENSIPUG00000024257) ENSIPUG00000024259 ENSIPUG00000024263 ENSIPUG00000024265 BEST2 (ENSIPUG00000024266) asna1 (ENSIPUG00000024268) rnf11a (ENSIPUG00000024270) NFIX (ENSIPUG00000024283) ENSIPUG00000024286 dand5 (ENSIPUG00000024287) junb (ENSIPUG00000024288) PRDX1 (ENSIPUG00000024290) ENSIPUG00000024292 ##22 ENSIPUG00000024296 ##22 ctsh (ENSIPUG00000024294) ENSIPUG00000024298 ##22 rnaseh2a (ENSIPUG00000024299) snrpb2 (ENSIPUG00000024300) prokr1a (ENSIPUG00000024305) aplf (ENSIPUG00000024306) fbxo48 (ENSIPUG00000024307) Cnrip1 (ENSIPUG00000024308) Ppp3r1 (ENSIPUG00000024309) etaa1 (ENSIPUG00000024335) MEIS1 (ENSIPUG00000024342) SPRED2 (ENSIPUG00000024350) actr2a (ENSIPUG00000024353) atg4d (ENSIPUG00000024357) MAST1 (ENSIPUG00000024360) taf5l (ENSIPUG00000024363) capn9 (ENSIPUG00000024364) Osteoglossocephalai ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.l ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.l ##22 Otomorpha ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.l ##22 Clupeiformes ANCESTRAL SPECIES ENSGT01100000263515.a.b.a.b.b.l ##22 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 15 tsr3 (ENSCHAG00000013002) #28 gnptg (ENSCHAG00000013077) #27 ENSCHAG00000013099 ENSCHAG00000013274 ENSCHAG00000013426 ENSCHAG00000013455 ENSCHAG00000013471 ENSCHAG00000013548 stat5b (ENSCHAG00000013587) ENSCHAG00000013693 ENSCHAG00000013731 ENSCHAG00000013740 zgc:56095 (ENSCHAG00000013770) syt5b (ENSCHAG00000013790) ENSCHAG00000013836 ##22 ENSCHAG00000013849 ##22 CAVIN1 (ENSCHAG00000013873) atp6v0a1b (ENSCHAG00000013901) NAGLU (ENSCHAG00000014384) coasy (ENSCHAG00000014399) ENSCHAG00000014453 rgrb (ENSCHAG00000014553) lrit1b (ENSCHAG00000014568) LRIT2 (ENSCHAG00000014594) CDHR1 (ENSCHAG00000014606) GHITM (ENSCHAG00000015374) ifit9 (ENSCHAG00000015438) ifit9 (ENSCHAG00000015447) ENSCHAG00000015470 ENSCHAG00000015478 slc16a12b (ENSCHAG00000015558) Atlantic herring MODERN SPECIES 15 pdpk1b (ENSCHAG00000012143) tsr3 (ENSCHAG00000013002) #28 gnptg (ENSCHAG00000013077) #27 ENSCHAG00000013099 ENSCHAG00000013274 ENSCHAG00000013426 ENSCHAG00000013455 ENSCHAG00000013471 ENSCHAG00000013548 stat5b (ENSCHAG00000013587) ENSCHAG00000013693 ENSCHAG00000013731 ENSCHAG00000013740 zgc:56095 (ENSCHAG00000013770) syt5b (ENSCHAG00000013790) ENSCHAG00000013836 ##22 ENSCHAG00000013849 ##22 CAVIN1 (ENSCHAG00000013873) atp6v0a1b (ENSCHAG00000013901) NAGLU (ENSCHAG00000014384) coasy (ENSCHAG00000014399) ENSCHAG00000014453 rgrb (ENSCHAG00000014553) lrit1b (ENSCHAG00000014568) LRIT2 (ENSCHAG00000014594) CDHR1 (ENSCHAG00000014606) GHITM (ENSCHAG00000015374) ifit9 (ENSCHAG00000015438) ifit9 (ENSCHAG00000015447) ENSCHAG00000015470 ENSCHAG00000015478 Atlantic herring MODERN SPECIES 2 RNF19A (ENSCHAG00000012117) ENSCHAG00000012132 ENSCHAG00000012191 fbxo43 (ENSCHAG00000012222) ENSCHAG00000012233 osr2 (ENSCHAG00000012333) stk3 (ENSCHAG00000012365) KCNS2 (ENSCHAG00000012541) NIPAL2 (ENSCHAG00000012549) POP1 (ENSCHAG00000012569) elp6 (ENSCHAG00000012581) ENSCHAG00000012613 SMARCC1 (ENSCHAG00000012695) ENSCHAG00000015377 ENSCHAG00000015386 ENSCHAG00000015449 ##22 ENSCHAG00000015477 ENSCHAG00000015708 ENSCHAG00000015731 ENSCHAG00000015759 ENSCHAG00000016059 herpud2 (ENSCHAG00000016066) tbx20 (ENSCHAG00000016081) dpy19l1l (ENSCHAG00000016172) SLC4A7 (ENSCHAG00000016862) ENSCHAG00000017311 ENSCHAG00000017313 nt5c3a (ENSCHAG00000017324) bckdhb (ENSCHAG00000017787) TENT5A (ENSCHAG00000018188) IBTK (ENSCHAG00000018253) Gnathostomata ANCESTRAL SPECIES ENSGT01100000263515.a.b.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01100000263515.a.b.b ##22 Actinopterygii ANCESTRAL SPECIES 6 ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000163876 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885 ENSGT00390000000087 ENSGT00390000002918.a.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00940000155366.b.b ENSGT00940000156053 ENSGT00390000002886.b.a ENSGT00940000156222.a.a ENSGT00530000063707.b ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 ENSGT00390000004428.b ENSGT00940000161578 ENSGT00390000013271 Neopterygii ANCESTRAL SPECIES 19 ENSGT01050000244814.a.a.a.a ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000163876 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885 ENSGT00390000000087 ENSGT00390000002918.a.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00390000013260.B ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 ENSGT00940000166046 ENSGT00940000155366.b.b.d.b ENSGT00940000156053 ENSGT00390000002886.b.a ENSGT00940000156222.a.a ENSGT00530000063707.b ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 Spotted gar MODERN SPECIES 651 fbxl16 (ENSLOCG00000006759) ENSLOCG00000006723 ENSLOCG00000006707 zgc:153896 (ENSLOCG00000006693) rbfox1 (ENSLOCG00000006675) TMEM114 (ENSLOCG00000006657) mettl22 (ENSLOCG00000006624) abat (ENSLOCG00000006598) tmem186 (ENSLOCG00000006581) pmm2 (ENSLOCG00000006565) carhsp1 (ENSLOCG00000006547) nat15 (ENSLOCG00000006527) ints15 (ENSLOCG00000006510) dnase1 (ENSLOCG00000006492) eci1 (ENSLOCG00000006473) ENSLOCG00000006444 ##22 clcn7 (ENSLOCG00000006424) #23 PERCC1 (ENSLOCG00000006402) pgap6 (ENSLOCG00000006386) ENSLOCG00000006374 rgs11 (ENSLOCG00000006354) arhgdig (ENSLOCG00000006313) pdia2 (ENSLOCG00000006290) zgc:136472 (ENSLOCG00000006270) si:ch211-157c3.4 (ENSLOCG00000006257) USP7 (ENSLOCG00000006243) hapstr1a (ENSLOCG00000006228) GRIN2A (ENSLOCG00000006209) emp2 (ENSLOCG00000006189) ENSLOCG00000006174 TVP23A (ENSLOCG00000006161) Osteoglossocephalai ANCESTRAL SPECIES 79 ENSGT00940000159365.a ENSGT01050000244893.c.a.a ENSGT01030000234842 ENSGT00940000155217 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000161578 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000000022.a ENSGT00390000002918.a.a ENSGT00390000000087 ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B Osteoglossiformes ANCESTRAL SPECIES 204 ENSGT00940000158180.c ENSGT00940000157561 ENSGT01050000244893.c.a.a.d ENSGT00940000155217.m ENSGT00940000161164.i ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000161578 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b.g ENSGT00530000063707.b ENSGT00940000156222.a.a.a ENSGT00390000002886.b.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.c #23 ENSGT00940000160198.c ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000011370 ENSGT00390000008314 ENSGT00390000000022.a Asian bonytongue MODERN SPECIES 23 ENSSFOG00015014333 RBBP6 (ENSSFOG00015014316) ENSSFOG00015026040 prkcbb (ENSSFOG00015014245) socs1a (ENSSFOG00015014200) CLEC16A (ENSSFOG00015014098) dexi (ENSSFOG00015014074) ENSSFOG00015014013 nubp1 (ENSSFOG00015013970) ##11 EMP2 (ENSSFOG00015029497) ENSSFOG00015026221 GRIN2A (ENSSFOG00015013895) hapstr1a (ENSSFOG00015030271) USP7 (ENSSFOG00015013818) si:ch211-157c3.4 (ENSSFOG00015013794) ENSSFOG00015013777 ##22 clcn7 (ENSSFOG00015013692) #23 ENSSFOG00015013281 rgs11 (ENSSFOG00015013201) arhgdig (ENSSFOG00015024940) eci1 (ENSSFOG00015032718) dnase1 (ENSSFOG00015013160) znrf2b (ENSSFOG00015009141) eaf1 (ENSSFOG00015013119) mettl6 (ENSSFOG00015013082) sh3bp5b (ENSSFOG00015013034) capn7 (ENSSFOG00015012966) COL6A6 (ENSSFOG00015012945) ENSSFOG00015012917 PIK3R4 (ENSSFOG00015012765) ATP2C1 (ENSSFOG00015012537) P. kingsleyae MODERN SPECIES 19 ndufab1b (ENSPKIG00000018748) ENSPKIG00000018713 RBBP6 (ENSPKIG00000018682) ENSPKIG00000018667 prkcbb (ENSPKIG00000018611) socs1a (ENSPKIG00000018580) CLEC16A (ENSPKIG00000018560) dexi (ENSPKIG00000018548) CIITA (ENSPKIG00000018513) nubp1 (ENSPKIG00000018466) ##11 EMP2 (ENSPKIG00000018436) GRIN2A (ENSPKIG00000018403) hapstr1a (ENSPKIG00000018384) USP7 (ENSPKIG00000018286) si:ch211-157c3.4 (ENSPKIG00000018249) ENSPKIG00000018235 ##22 clcn7 (ENSPKIG00000018139) #23 rgs11 (ENSPKIG00000018076) arhgdig (ENSPKIG00000018045) eci1 (ENSPKIG00000017987) dnase1 (ENSPKIG00000018016) ints15 (ENSPKIG00000017941) nat15 (ENSPKIG00000017913) carhsp1 (ENSPKIG00000017889) abat (ENSPKIG00000017859) mettl22 (ENSPKIG00000017807) TMEM114 (ENSPKIG00000017784) CCDC97 (ENSPKIG00000017760) CACNA1H (ENSPKIG00000017681) #34 ENSPKIG00000017652 b9d1 (ENSPKIG00000017625) Clupeocephala ANCESTRAL SPECIES 171 ENSGT00940000155217.p ENSGT01060000248913 ENSGT00940000155217.o.b ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000161578 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a Otomorpha ANCESTRAL SPECIES 56 ENSGT00940000159365.b.a.b ENSGT00940000159365.a ENSGT01050000244893.c.a.a.a ENSGT00940000155217.p ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000163128.a ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b ENSGT00410000026495.A Clupeiformes ANCESTRAL SPECIES 149 ENSGT00950000182935.B.b.d.a ENSGT00390000014178 ENSGT01050000244893.c.a.a.a ENSGT00940000155217.p ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a Denticle herring MODERN SPECIES 17 CACNG3 (ENSDCDG00000003644) prkcbb (ENSDCDG00000003478) socs1a (ENSDCDG00000003410) CLEC16A (ENSDCDG00000003098) dexi (ENSDCDG00000032152) ENSDCDG00000032149 nubp1 (ENSDCDG00000032145) ##11 emp2 (ENSDCDG00000032140) ENSDCDG00000032135 ENSDCDG00000032134 GRIN2A (ENSDCDG00000032118) hapstr1a (ENSDCDG00000032110) hapstr1a (ENSDCDG00000032107) USP7 (ENSDCDG00000032063) si:ch211-157c3.4 (ENSDCDG00000032051) ENSDCDG00000032049 ##22 arhgdig (ENSDCDG00000032013) eci1 (ENSDCDG00000032012) eci1 (ENSDCDG00000032009) dnase1 (ENSDCDG00000032007) nat15 (ENSDCDG00000032005) carhsp1 (ENSDCDG00000032004) abat (ENSDCDG00000031997) mettl22 (ENSDCDG00000031987) TMEM114 (ENSDCDG00000031983) rbfox1 (ENSDCDG00000031965) ENSDCDG00000031958 ENSDCDG00000031698 fbxl16 (ENSDCDG00000031676) gsg1l (ENSDCDG00000031675) ENSDCDG00000031674 Atlantic herring MODERN SPECIES drg2 (ENSCHAG00000025053) gfer (ENSCHAG00000025051) syngr3a (ENSCHAG00000025043) znf598 (ENSCHAG00000025029) CACNG3 (ENSCHAG00000025026) prkcbb (ENSCHAG00000024849) ENSCHAG00000024784 nubp1 (ENSCHAG00000024756) ##11 ENSCHAG00000024746 emp2 (ENSCHAG00000024740) ENSCHAG00000024731 GRIN2A (ENSCHAG00000024462) hapstr1a (ENSCHAG00000024434) USP7 (ENSCHAG00000023609) si:ch211-157c3.4 (ENSCHAG00000023559) ENSCHAG00000023558 ##22 clcn7 (ENSCHAG00000022673) #23 arhgdig (ENSCHAG00000022616) eci1 (ENSCHAG00000022598) eci1 (ENSCHAG00000022526) dnase1 (ENSCHAG00000022364) nat15 (ENSCHAG00000022334) carhsp1 (ENSCHAG00000022327) abat (ENSCHAG00000021673) mettl22 (ENSCHAG00000021642) TMEM114 (ENSCHAG00000021625) ENSCHAG00000021601 rbfox1 (ENSCHAG00000021323) ENSCHAG00000021300 ENSCHAG00000021289 ENSCHAG00000021275 Otophysi ANCESTRAL SPECIES 57 ENSGT00940000157381 ENSGT01050000244894.b.a ENSGT00940000158979 ENSGT00390000004994 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b ENSGT00410000026495.A ENSGT00390000010116 Characiphysae ANCESTRAL SPECIES 89 ENSGT00940000157381 ENSGT01050000244894.b.a ENSGT00940000158979 ENSGT00390000004994 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000013260.B ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000163128.a ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b Characiphysae_b ANCESTRAL SPECIES 89 ENSGT00940000157381 ENSGT01050000244894.b.a ENSGT00940000158979 ENSGT00390000004994 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000013260.B ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000163128.a ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b Characoidei ANCESTRAL SPECIES 94 ENSGT00940000157381 ENSGT01050000244894.b.a ENSGT00940000158979 ENSGT00390000004994 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000013260.B ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000163128.a ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b Red-bellied piranha MODERN SPECIES 124 hapstr1a (ENSPNAG00000006095) USP7 (ENSPNAG00000003796) si:ch211-157c3.4 (ENSPNAG00000006652) ENSPNAG00000023610 ##22 clcn7 (ENSPNAG00000023588) #23 PDE6G (ENSPNAG00000023377) arhgdig (ENSPNAG00000023346) eci1 (ENSPNAG00000023319) dnase1 (ENSPNAG00000023295) nat15 (ENSPNAG00000023235) carhsp1 (ENSPNAG00000003758) abat (ENSPNAG00000023189) mettl22 (ENSPNAG00000023128) TMEM114 (ENSPNAG00000003756) rbfox1 (ENSPNAG00000023109) ENSPNAG00000023085 ENSPNAG00000022976 ENSPNAG00000022962 ENSPNAG00000022941 Mexicana tetra MODERN SPECIES 11 rab40c (ENSAMXG00000002591) pigq (ENSAMXG00000040652) socs1a (ENSAMXG00000025772) CLEC16A (ENSAMXG00000002554) dexi (ENSAMXG00000025771) ENSAMXG00000002539 nubp1 (ENSAMXG00000002538) ##11 ENSAMXG00000031743 emp2 (ENSAMXG00000032631) ENSAMXG00000033381 GRIN2A (ENSAMXG00000002516) hapstr1a (ENSAMXG00000033123) ENSAMXG00000031913 USP7 (ENSAMXG00000002501) si:ch211-157c3.4 (ENSAMXG00000036753) ENSAMXG00000002497 ##22 clcn7 (ENSAMXG00000002493) #23 PDE6G (ENSAMXG00000029075) arhgdig (ENSAMXG00000042057) eci1 (ENSAMXG00000002480) dnase1 (ENSAMXG00000002465) nat15 (ENSAMXG00000002460) carhsp1 (ENSAMXG00000029841) abat (ENSAMXG00000002458) mettl22 (ENSAMXG00000002450) ENSAMXG00000042606 TMEM114 (ENSAMXG00000036965) rbfox1 (ENSAMXG00000002431) ENSAMXG00000037509 ENSAMXG00000013739 ENSAMXG00000013711 Electric eel MODERN SPECIES 63 ENSEEEG00000021457 rab40c (ENSEEEG00000021456) pigq (ENSEEEG00000021407) socs1a (ENSEEEG00000021399) CLEC16A (ENSEEEG00000021366) dexi (ENSEEEG00000021362) ENSEEEG00000021358 nubp1 (ENSEEEG00000021349) ##11 emp2 (ENSEEEG00000021347) ENSEEEG00000021346 GRIN2A (ENSEEEG00000021344) hapstr1a (ENSEEEG00000021341) USP7 (ENSEEEG00000020925) si:ch211-157c3.4 (ENSEEEG00000020905) ENSEEEG00000020902 ##22 clcn7 (ENSEEEG00000020612) #23 arhgdig (ENSEEEG00000020590) eci1 (ENSEEEG00000020586) dnase1 (ENSEEEG00000020580) nat15 (ENSEEEG00000020579) carhsp1 (ENSEEEG00000020578) abat (ENSEEEG00000020394) mettl22 (ENSEEEG00000020357) TMEM114 (ENSEEEG00000020351) rbfox1 (ENSEEEG00000020330) ENSEEEG00000020325 SEPTIN12 (ENSEEEG00000020252) fbxl16 (ENSEEEG00000020236) gsg1l (ENSEEEG00000020235) ENSEEEG00000020234 Cyprinoidei ANCESTRAL SPECIES 1 ENSGT00940000157381 ENSGT01050000244894.b.a ENSGT00940000158979 ENSGT00390000004994 ENSGT00940000161164 ENSGT00390000013826 ENSGT00390000013271 ENSGT00940000169899 ENSGT00950000183193.A.c.a ##11 ENSGT00950000182696.A.b ENSGT00530000063707.b ENSGT00940000156222.a.a ENSGT00390000002886.b.a ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00550000074885 ENSGT00510000048539 ENSGT00390000011615.B ENSGT00940000160685 ENSGT00940000158310 ENSGT00940000159138 ENSGT01050000244814.a.a.a.a.b ENSGT00410000026495.A.b ENSGT00390000010116 Cyprininae ANCESTRAL SPECIES 52 ENSGT00940000161164.a.a.b ENSGT00390000013826.e ENSGT00390000013271.c ENSGT00940000169899.a ENSGT00950000183193.A.c.a.l ##11 ENSGT00950000182696.A.b.n ENSGT00530000063707.b.ab ENSGT00940000156222.a.a.d ENSGT00390000002886.b.a.d ENSGT00940000156053.v ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.f #23 ENSGT00390000013260.B.l ENSGT00390000006233.c.a.a.c ENSGT00390000005678.g ENSGT00950000182846.b.b ENSGT00390000008314.t ENSGT00390000000022.a.b ENSGT00550000074885.m ENSGT00510000048539.b ENSGT00390000011615.B.a ENSGT00940000160685.f ENSGT00940000158310.d ENSGT00940000159138.e ENSGT01050000244814.a.a.a.a.b.b ENSGT00410000026495.A.b.a Goldfish MODERN SPECIES 22 ENSCARG00000003506 rab40c (ENSCARG00000003499) pigq (ENSCARG00000003434) socs1a (ENSCARG00000003427) CLEC16A (ENSCARG00000003388) dexi (ENSCARG00000003363) ENSCARG00000003360 ENSCARG00000003304 nubp1 (ENSCARG00000003069) ##11 emp2 (ENSCARG00000003041) ENSCARG00000003008 ENSCARG00000002997 GRIN2A (ENSCARG00000002893) USP7 (ENSCARG00000002486) hapstr1a (ENSCARG00000002435) ENSCARG00000002422 ##22 clcn7 (ENSCARG00000001409) #23 arhgdig (ENSCARG00000001219) dnase1 (ENSCARG00000001210) nat15 (ENSCARG00000001204) carhsp1 (ENSCARG00000001199) abat (ENSCARG00000000912) TMEM114 (ENSCARG00000000758) rbfox1 (ENSCARG00000000713) ENSCARG00000000412 fbxl16 (ENSCARG00000070122) gsg1l (ENSCARG00000070121) ENSCARG00000070117 si:ch211-76l23.7 (ENSCARG00000070115) alg1 (ENSCARG00000070109) ENSCARG00000070103 Cyprininae_a ANCESTRAL SPECIES 54 ENSGT00940000161164.a.a.b ENSGT00390000013826.e ENSGT00950000183193.A.c.a.l ##11 ENSGT00950000182696.A.b.n ENSGT00530000063707.b.ab ENSGT00940000156222.a.a.d ENSGT00390000002886.b.a.d ENSGT00940000156053.v ENSGT00940000155366.b.b.d.b.g ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.f #23 ENSGT00390000013260.B.l.a ENSGT00390000006233.c.a.a.c ENSGT00390000005678.g ENSGT00950000182846.b.b ENSGT00390000008314.t ENSGT00390000000022.a.b ENSGT00550000074885.m ENSGT00510000048539.b ENSGT00390000011615.B.a ENSGT00940000160685.f ENSGT00940000158310.d ENSGT00940000159138.e ENSGT01050000244814.a.a.a.a.b.b ENSGT00410000026495.A.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 129 ENSSGRG00000009894 xylt1 (ENSSGRG00000009904) ENSSGRG00000009905 rab40c (ENSSGRG00000009908) pigq (ENSSGRG00000009915) socs1a (ENSSGRG00000010021) CLEC16A (ENSSGRG00000010027) dexi (ENSSGRG00000010051) nubp1 (ENSSGRG00000010054) ##11 emp2 (ENSSGRG00000010055) ENSSGRG00000010056 GRIN2A (ENSSGRG00000010058) hapstr1a (ENSSGRG00000010072) USP7 (ENSSGRG00000010095) si:ch211-157c3.4 (ENSSGRG00000011535) ENSSGRG00000011537 ##22 clcn7 (ENSSGRG00000011544) #23 ENSSGRG00000012756 arhgdig (ENSSGRG00000012786) eci1 (ENSSGRG00000012789) dnase1 (ENSSGRG00000012790) nat15 (ENSSGRG00000012791) carhsp1 (ENSSGRG00000012792) abat (ENSSGRG00000012806) mettl22 (ENSSGRG00000013412) TMEM114 (ENSSGRG00000013413) rbfox1 (ENSSGRG00000013414) ENSSGRG00000013415 Golden-line barbel MODERN SPECIES 26 ENSSGRG00000047206 xylt1 (ENSSGRG00000047207) ENSSGRG00000047208 rab40c (ENSSGRG00000047210) PIGQ (ENSSGRG00000047211) socs1a (ENSSGRG00000047222) CLEC16A (ENSSGRG00000047226) dexi (ENSSGRG00000047260) ENSSGRG00000047263 nubp1 (ENSSGRG00000047266) ##11 emp2 (ENSSGRG00000047269) ENSSGRG00000047271 GRIN2A (ENSSGRG00000047278) USP7 (ENSSGRG00000047284) si:ch211-157c3.4 (ENSSGRG00000047602) ENSSGRG00000047603 ##22 clcn7 (ENSSGRG00000047612) #23 ENSSGRG00000048273 arhgdig (ENSSGRG00000048275) eci1 (ENSSGRG00000048277) dnase1 (ENSSGRG00000048278) nat15 (ENSSGRG00000048279) abat (ENSSGRG00000048282) mettl22 (ENSSGRG00000048284) TMEM114 (ENSSGRG00000048286) rbfox1 (ENSSGRG00000048290) ENSSGRG00000048359 fbxl16 (ENSSGRG00000048444) gsg1l (ENSSGRG00000048445) ENSSGRG00000048446 flr (ENSSGRG00000048455) Common carp reference MODERN SPECIES 3 ENSCCRG00000021850 rab40c (ENSCCRG00000063693) pigq (ENSCCRG00000070358) socs1a (ENSCCRG00000062042) CLEC16A (ENSCCRG00000020998) ENSCCRG00000040971 dexi (ENSCCRG00000040987) nubp1 (ENSCCRG00000040951) ##11 emp2 (ENSCCRG00000070668) ENSCCRG00000077114 ENSCCRG00000075752 GRIN2A (ENSCCRG00000016475) hapstr1a (ENSCCRG00000018410) si:ch211-157c3.4 (ENSCCRG00000057107) USP7 (ENSCCRG00000079121) ENSCCRG00000000092 ##22 clcn7 (ENSCCRG00000047999) #23 ENSCCRG00000068081 arhgdig (ENSCCRG00000054484) eci1 (ENSCCRG00000047966) dnase1 (ENSCCRG00000004999) nat15 (ENSCCRG00000072502) carhsp1 (ENSCCRG00000018392) abat (ENSCCRG00000018395) mettl22 (ENSCCRG00000018403) TMEM114 (ENSCCRG00000059558) rbfox1 (ENSCCRG00000060614) ENSCCRG00000054478 fbxl16 (ENSCCRG00000011627) gsg1l (ENSCCRG00000013339) ENSCCRG00000076591 Zebrafish MODERN SPECIES 18 rps15a (ENSDARG00000010160) xylt1 (ENSDARG00000061248) ENSDARG00000013252 rab40c (ENSDARG00000061208) pigq (ENSDARG00000038097) socs1a (ENSDARG00000038095) CLEC16A (ENSDARG00000038094) dexi (ENSDARG00000055474) ENSDARG00000090851 nubp1 (ENSDARG00000055472) ##11 emp2 (ENSDARG00000044588) ENSDARG00000089698 GRIN2A (ENSDARG00000034493) hapstr1a (ENSDARG00000055383) USP7 (ENSDARG00000073710) ENSDARG00000038072 ##22 si:ch211-157c3.4 (ENSDARG00000087093) clcn7 (ENSDARG00000019556) #23 ENSDARG00000115268 arhgdig (ENSDARG00000004034) eci1 (ENSDARG00000018002) dnase1 (ENSDARG00000012539) nat15 (ENSDARG00000061185) carhsp1 (ENSDARG00000053129) abat (ENSDARG00000006031) mettl22 (ENSDARG00000077863) TMEM114 (ENSDARG00000038089) rbfox1 (ENSDARG00000014746) ENSDARG00000019191 fbxl16 (ENSDARG00000060915) gsg1l (ENSDARG00000037390) Euteleosteomorpha ANCESTRAL SPECIES 379 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a Protacanthopterygii ANCESTRAL SPECIES 110 ENSGT01050000244814.a.a.a.a.a.a.a ENSGT01050000244814.a.a.a.a.a.a.b ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885.k.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a Salmoninae ANCESTRAL SPECIES 139 ENSGT00410000026495.A.e ENSGT01050000244814.a.a.a.a.a.a.b ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000160685.g ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885.k.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b.o ENSGT00390000005678 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.h.a #23 ENSGT00390000006233.c.a.a Salmoninae_a ANCESTRAL SPECIES 52 ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000160685.g ENSGT00390000011615.B.d ENSGT00510000048539 ENSGT00550000074885.k.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b.o ENSGT00390000005678.s ENSGT00950000182846.b.p ENSGT00390000005678.t ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.h.a #23 ENSGT00390000006233.c.a.a.h Salmo ANCESTRAL SPECIES 88 ENSGT00940000159138.g.a ENSGT00940000158310 ENSGT00940000160685.g ENSGT00390000011615.B.d ENSGT00390000011615.B.c ENSGT00510000048539 ENSGT00550000074885.k.a ENSGT01100000263476.C.a.a.a.b.a.a ENSGT00390000000022.a.e ENSGT00390000008314.o ENSGT00950000182846.b.p ENSGT00390000005678.t ENSGT00390000002886.a.a.b.b ENSGT00940000156053.n ENSGT00940000155366.b.b.d.b.a ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.h.a #23 ENSGT00390000006233.c.a.a.h River trout DUPLICATION River trout MODERN SPECIES 25 fbxl16 (ENSSTUG00000020463) fbxl16 (ENSSTUG00000020436) ENSSTUG00000020426 TMEM114 (ENSSTUG00000020417) mettl22 (ENSSTUG00000020346) ENSSTUG00000020322 abat (ENSSTUG00000019002) ENSSTUG00000018912 carhsp1 (ENSSTUG00000018898) nat15 (ENSSTUG00000018885) dnase1 (ENSSTUG00000018763) eci1 (ENSSTUG00000018728) ENSSTUG00000018714 USP7 (ENSSTUG00000017679) si:ch211-157c3.4 (ENSSTUG00000017640) ENSSTUG00000017634 ##22 clcn7 (ENSSTUG00000017389) #23 arhgdig (ENSSTUG00000017327) ENSSTUG00000017323 ENSSTUG00000017321 ENSSTUG00000029076 ENSSTUG00000029062 ENSSTUG00000029015 ENSSTUG00000028917 ENSSTUG00000028902 ENSSTUG00000028889 ENSSTUG00000028865 ENSSTUG00000028856 ENSSTUG00000028808 ENSSTUG00000028705 ENSSTUG00000028688 River trout MODERN SPECIES ENSSTUG00000026403 ENSSTUG00000026385 ENSSTUG00000026379 ENSSTUG00000026372 TMEM114 (ENSSTUG00000026358) abat (ENSSTUG00000026230) ENSSTUG00000026218 ENSSTUG00000026187 carhsp1 (ENSSTUG00000026177) nat15 (ENSSTUG00000026156) dnase1 (ENSSTUG00000026079) eci1 (ENSSTUG00000026041) ENSSTUG00000026025 USP7 (ENSSTUG00000025706) si:ch211-157c3.4 (ENSSTUG00000025686) ENSSTUG00000025678 ##22 clcn7 (ENSSTUG00000025453) #23 ENSSTUG00000025390 ENSSTUG00000025366 atp5pd (ENSSTUG00000025355) znf750 (ENSSTUG00000025338) TBCD (ENSSTUG00000025311) fn3krp (ENSSTUG00000025285) ARL16 (ENSSTUG00000025270) EPN3 (ENSSTUG00000025237) rasd2a (ENSSTUG00000025228) rsad1 (ENSSTUG00000025215) cldnk (ENSSTUG00000025208) mrpl12 (ENSSTUG00000025196) ENSSTUG00000025181 ENSSTUG00000025157 Atlantic salmon MODERN SPECIES 22 fbxl16 (ENSSSAG00000105593) ENSSSAG00000081905 rbfox1 (ENSSSAG00000107005) TMEM114 (ENSSSAG00000119109) mettl22 (ENSSSAG00000001202) ENSSSAG00000118087 abat (ENSSSAG00000001220) ENSSSAG00000001246 carhsp1 (ENSSSAG00000015601) nat15 (ENSSSAG00000054448) dnase1 (ENSSSAG00000062289) eci1 (ENSSSAG00000083636) ENSSSAG00000002844 ENSSSAG00000002694 si:ch211-157c3.4 (ENSSSAG00000060699) ENSSSAG00000092770 ##22 clcn7 (ENSSSAG00000111144) #23 arhgdig (ENSSSAG00000100717) ENSSSAG00000120196 ENSSSAG00000103733 ENSSSAG00000095014 ENSSSAG00000039474 ENSSSAG00000116735 ENSSSAG00000105395 ENSSSAG00000121192 ENSSSAG00000108920 ENSSSAG00000006402 GRIN2A (ENSSSAG00000116614) ENSSSAG00000104393 ENSSSAG00000105135 ENSSSAG00000089270 Oncorhynchus ANCESTRAL SPECIES 278 ENSGT00940000155366.b.b.d.b.d ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.h.a #23 ENSGT00390000006233.c.a.a.h Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 4 gsg1l (ENSOMYG00000049778) fbxl16 (ENSOMYG00000076630) ENSOMYG00000067901 ENSOMYG00000071539 rbfox1 (ENSOMYG00000050676) ENSOMYG00000057107 mettl22 (ENSOMYG00000025432) abat (ENSOMYG00000060841) carhsp1 (ENSOMYG00000077769) nat15 (ENSOMYG00000074626) dnase1 (ENSOMYG00000070417) ENSOMYG00000057626 ENSOMYG00000032275 ENSOMYG00000054488 si:ch211-157c3.4 (ENSOMYG00000063871) ENSOMYG00000059728 ##22 clcn7 (ENSOMYG00000065949) #23 ENSOMYG00000069856 ENSOMYG00000066758 ENSOMYG00000072580 ENSOMYG00000071941 Rainbow trout MODERN SPECIES 3 ENSOMYG00000008017 ndel1b (ENSOMYG00000008231) ENSOMYG00000016825 rbfox1 (ENSOMYG00000054237) ENSOMYG00000067241 TMEM114 (ENSOMYG00000050152) mettl22 (ENSOMYG00000049558) abat (ENSOMYG00000072153) carhsp1 (ENSOMYG00000005421) nat15 (ENSOMYG00000005506) dnase1 (ENSOMYG00000005651) eci1 (ENSOMYG00000069243) ENSOMYG00000005774 ENSOMYG00000072970 si:ch211-157c3.4 (ENSOMYG00000005332) ENSOMYG00000005388 ##22 ENSOMYG00000061957 #23 ENSOMYG00000063904 ENSOMYG00000065380 ENSOMYG00000065351 ENSOMYG00000070293 ENSOMYG00000068213 ENSOMYG00000055887 ENSOMYG00000062447 ENSOMYG00000055973 ENSOMYG00000050661 ENSOMYG00000048799 ENSOMYG00000067365 ENSOMYG00000037133 ENSOMYG00000051573 ENSOMYG00000035742 Oncorhynchus_a ANCESTRAL SPECIES 398 ENSGT00940000155366.b.b.d.b.d ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458.h.a #23 ENSGT00390000006233.c.a.a.h Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1263 ENSOKIG00005036794 ECI1 (ENSOKIG00005036813) ENSOKIG00005036866 USP7 (ENSOKIG00005036967) si:ch211-157c3.4 (ENSOKIG00005038428) ENSOKIG00005038459 ##22 clcn7 (ENSOKIG00005038488) #23 ENSOKIG00005038645 arhgdig (ENSOKIG00005038664) ENSOKIG00005038680 ENSOKIG00005038766 ENSOKIG00005038775 Coho salmon MODERN SPECIES 35 ENSOKIG00005043267 ENSOKIG00005043233 ENSOKIG00005043225 ENSOKIG00005043210 TMEM114 (ENSOKIG00005043175) mettl22 (ENSOKIG00005043119) ENSOKIG00005043105 abat (ENSOKIG00005042545) ENSOKIG00005042510 nat15 (ENSOKIG00005042495) dnase1 (ENSOKIG00005042481) eci1 (ENSOKIG00005042397) ENSOKIG00005042372 USP7 (ENSOKIG00005040973) si:ch211-157c3.4 (ENSOKIG00005040840) ENSOKIG00005040828 ##22 clcn7 (ENSOKIG00005040446) #23 ENSOKIG00005040411 arhgdig (ENSOKIG00005040359) ENSOKIG00005040346 ENSOKIG00005040337 ENSOKIG00005040330 ENSOKIG00005040322 ENSOKIG00005040318 ENSOKIG00005040226 ENSOKIG00005040177 ENSOKIG00005040157 ENSOKIG00005039878 ENSOKIG00005039868 SUZ12 (ENSOKIG00005039753) ENSOKIG00005039727 Huchen MODERN SPECIES 9062 ENSHHUG00000003764 ##22 ENSHHUG00000003756 ENSHHUG00000003755 #23 Northern pike MODERN SPECIES 10 rbfox1 (ENSELUG00000013096) ENSELUG00000026973 ENSELUG00000013107 TMEM114 (ENSELUG00000027028) mettl22 (ENSELUG00000013191) abat (ENSELUG00000000479) carhsp1 (ENSELUG00000013309) nat15 (ENSELUG00000013354) ENSELUG00000026346 ENSELUG00000013377 dnase1 (ENSELUG00000013389) eci1 (ENSELUG00000013472) ENSELUG00000013491 USP7 (ENSELUG00000013598) si:ch211-157c3.4 (ENSELUG00000013620) ENSELUG00000013627 ##22 clcn7 (ENSELUG00000013671) #23 ENSELUG00000013688 arhgdig (ENSELUG00000013703) dctn5 (ENSELUG00000013726) ndufab1 (ENSELUG00000013784) TNRC6A (ENSELUG00000013855) ENSELUG00000013904 CACNG3 (ENSELUG00000000509) PRKCB (ENSELUG00000013970) socs1a (ENSELUG00000013999) ENSELUG00000029621 CLEC16A (ENSELUG00000014033) ENSELUG00000034158 dexi (ENSELUG00000014050) ENSELUG00000014069 Acanthomorphata ANCESTRAL SPECIES 318 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a Euacanthomorphacea ANCESTRAL SPECIES 94 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a Pinecone sodierfish MODERN SPECIES 22 nubp1 (ENSMMDG00005000341) ##11 ENSMMDG00005000370 dexi (ENSMMDG00005000380) CLEC16A (ENSMMDG00005000458) socs1a (ENSMMDG00005000773) PRKCB (ENSMMDG00005000782) ENSMMDG00005000786 ENSMMDG00005000791 TNRC6A (ENSMMDG00005000798) ndufab1b (ENSMMDG00005000812) dctn5 (ENSMMDG00005000815) ENSMMDG00005000819 USP7 (ENSMMDG00005000860) si:ch211-157c3.4 (ENSMMDG00005002409) SLC2A6 (ENSMMDG00005002413) ENSMMDG00005002427 ##22 clcn7 (ENSMMDG00005002459) #23 ENSMMDG00005003103 arhgdig (ENSMMDG00005003106) ENSMMDG00005003111 dnase1 (ENSMMDG00005003124) eci1 (ENSMMDG00005003170) ENSMMDG00005003202 ENSMMDG00005003508 nat15 (ENSMMDG00005003510) carhsp1 (ENSMMDG00005003511) ENSMMDG00005003513 DLX3 (ENSMMDG00005003519) PSMD11 (ENSMMDG00005003557) rpain (ENSMMDG00005003583) cdk5r1a (ENSMMDG00005003592) Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Ovalentaria ANCESTRAL SPECIES 1 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Cichlidae ANCESTRAL SPECIES 19 ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826.i ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000157561 ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000173056.a.b ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 27 ENSGT00950000182979.a.a.a.a ENSGT00940000163663.A.a ENSGT00730000111100.a.a ENSGT00940000156643 ENSGT00950000182906.a.a.a ENSGT00930000151032.A.c.b ENSGT00940000167865 ENSGT00940000155335.s.b ENSGT00940000153340.A ENSGT00390000001979 ENSGT00950000182935.B.b.d.a ENSGT00390000014178 ENSGT00920000149129 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a Haplochromini ANCESTRAL SPECIES 54 ENSGT00950000182979.a.a.a.a ENSGT00940000163663.A.a ENSGT00730000111100.a.a ENSGT00940000156643 ENSGT00950000182906.a.a.a ENSGT00930000151032.A.c.b ENSGT00940000167865 ENSGT00940000155335.s.b ENSGT00940000153340.A ENSGT00390000001979 ENSGT00950000182935.B.b.d.a ENSGT00390000014178 ENSGT00920000149129 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a Burton s mouthbrooder MODERN SPECIES 1149 si:ch211-157c3.4 (ENSHBUG00000023482) SLC2A6 (ENSHBUG00000023491) ENSHBUG00000023508 ##22 clcn7 (ENSHBUG00000023697) #23 rpusd1 (ENSHBUG00000023728) arhgdig (ENSHBUG00000023773) Haplochromini_A ANCESTRAL SPECIES 34 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a ENSGT00390000018426 ENSGT00940000154208.d ENSGT00940000156578.a.a ENSGT00390000018542.a.b ENSGT00440000039203.j ENSGT00940000165277.b ENSGT00940000155618 ENSGT00390000001347 ENSGT00940000153657.A ENSGT00940000155497.a.a ENSGT00940000158365.f.b ENSGT00940000156701 P. nyererei MODERN SPECIES 644 si:ch211-157c3.4 (ENSPNYG00000024086) SLC2A6 (ENSPNYG00000024082) ENSPNYG00000024079 ##22 clcn7 (ENSPNYG00000024077) #23 rpusd1 (ENSPNYG00000024076) arhgdig (ENSPNYG00000024075) znhit1 (ENSPNYG00000024072) TOB2 (ENSPNYG00000024071) tefb (ENSPNYG00000024069) zc3h7ba (ENSPNYG00000024065) rangap1a (ENSPNYG00000024061) ENSPNYG00000024060 rbx1 (ENSPNYG00000024059) st13 (ENSPNYG00000024058) xpnpep3 (ENSPNYG00000024056) EP300 (ENSPNYG00000024055) ENSPNYG00000024051 TOP3A (ENSPNYG00000024044) Haplochromini_B ANCESTRAL SPECIES 31 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00510000048339 ENSGT00390000006233.c.a.a ENSGT00390000018426 ENSGT00940000154208.d ENSGT00940000156578.a.a ENSGT00390000018542.a.b ENSGT00440000039203.j ENSGT00940000165277.b ENSGT00940000155618 ENSGT00390000001347 ENSGT00940000153657.A ENSGT00940000155497.a.a ENSGT00940000158365.f.b ENSGT00940000156701 Eastern happy MODERN SPECIES 16 gfer (ENSACLG00000012470) syngr3a (ENSACLG00000012478) znf598 (ENSACLG00000012485) slc25a17 (ENSACLG00000012504) ENSACLG00000012524 ENSACLG00000012538 MGST1 (ENSACLG00000012560) ENSACLG00000012588 ENSACLG00000012603 ENSACLG00000012627 ENSACLG00000013178 ENSACLG00000013181 ENSACLG00000013537 si:ch211-157c3.4 (ENSACLG00000013602) SLC2A6 (ENSACLG00000013616) ENSACLG00000013623 ##22 clcn7 (ENSACLG00000013637) #23 rpusd1 (ENSACLG00000013692) arhgdig (ENSACLG00000013708) znhit1 (ENSACLG00000013738) TOB2 (ENSACLG00000013836) TEF (ENSACLG00000013850) ZC3H7B (ENSACLG00000013897) rangap1a (ENSACLG00000013966) ENSACLG00000014070 rbx1 (ENSACLG00000014188) st13 (ENSACLG00000014094) xpnpep3 (ENSACLG00000014201) EP300 (ENSACLG00000014268) cbx7a (ENSACLG00000014466) TOP3A (ENSACLG00000014486) Zebra mbuna MODERN SPECIES 53 ENSMZEG00005021923 si:ch211-157c3.4 (ENSMZEG00005021925) SLC2A6 (ENSMZEG00005021928) ENSMZEG00005021930 ##22 clcn7 (ENSMZEG00005021934) #23 rpusd1 (ENSMZEG00005003214) arhgdig (ENSMZEG00005003227) znhit1 (ENSMZEG00005003278) TOB2 (ENSMZEG00005003307) TEF (ENSMZEG00005003328) ZC3H7B (ENSMZEG00005003357) rangap1a (ENSMZEG00005003391) ENSMZEG00005003455 rbx1 (ENSMZEG00005003464) st13 (ENSMZEG00005003475) xpnpep3 (ENSMZEG00005003502) EP300 (ENSMZEG00005003546) cbx7a (ENSMZEG00005003654) TOP3A (ENSMZEG00005003668) Lyretail cichlid MODERN SPECIES 344 CCDC97 (ENSNBRG00000005673) ENSNBRG00000005688 ENSNBRG00000005747 ENSNBRG00000005757 desi1a (ENSNBRG00000005777) flii (ENSNBRG00000005821) LLGL1 (ENSNBRG00000005932) ENSNBRG00000006019 drg2 (ENSNBRG00000006049) gfer (ENSNBRG00000006096) syngr3a (ENSNBRG00000006115) znf598 (ENSNBRG00000006191) slc25a17 (ENSNBRG00000006208) si:ch211-157c3.4 (ENSNBRG00000006221) SLC2A6 (ENSNBRG00000006245) ENSNBRG00000006326 ##22 clcn7 (ENSNBRG00000006361) #23 rpusd1 (ENSNBRG00000006457) arhgdig (ENSNBRG00000006516) ENSNBRG00000006541 USP7 (ENSNBRG00000006583) ENSNBRG00000006680 ndufab1b (ENSNBRG00000006707) dctn5 (ENSNBRG00000006760) TNRC6A (ENSNBRG00000006790) ENSNBRG00000006838 ENSNBRG00000006869 PRKCB (ENSNBRG00000006882) socs1a (ENSNBRG00000006919) CLEC16A (ENSNBRG00000006934) dexi (ENSNBRG00000006943) Nile tilapia MODERN SPECIES 16 dexi (ENSONIG00000036179) CLEC16A (ENSONIG00000015725) socs1 (ENSONIG00000020647) PRKCB (ENSONIG00000015710) ENSONIG00000015705 TNRC6A (ENSONIG00000015699) ndufab1b (ENSONIG00000015698) dctn5 (ENSONIG00000015696) ENSONIG00000015693 USP7 (ENSONIG00000015689) ENSONIG00000015688 ENSONIG00000027154 ENSONIG00000030785 si:ch211-157c3.4 (ENSONIG00000029933) SLC2A6 (ENSONIG00000015682) ENSONIG00000015681 ##22 clcn7 (ENSONIG00000015674) #23 rpusd1 (ENSONIG00000015672) arhgdig (ENSONIG00000015667) slc25a17 (ENSONIG00000015661) znf598 (ENSONIG00000015658) syngr3 (ENSONIG00000015655) drg2 (ENSONIG00000015653) MYO15A (ENSONIG00000015652) LLGL1 (ENSONIG00000015647) flii (ENSONIG00000015639) desi1a (ENSONIG00000041180) ENSONIG00000032305 ENSONIG00000034913 ENSONIG00000027262 CCDC97 (ENSONIG00000040482) Midas cichlid MODERN SPECIES 906 ENSACIG00000015647 si:ch211-157c3.4 (ENSACIG00000015660) SLC2A6 (ENSACIG00000015683) ENSACIG00000015766 ##22 clcn7 (ENSACIG00000015813) #23 rpusd1 (ENSACIG00000015863) arhgdig (ENSACIG00000015904) slc25a17 (ENSACIG00000015915) znf598 (ENSACIG00000016051) syngr3a (ENSACIG00000016082) gfer (ENSACIG00000016121) drg2 (ENSACIG00000016140) MYO15A (ENSACIG00000016175) LLGL1 (ENSACIG00000016284) flii (ENSACIG00000016334) desi1a (ENSACIG00000016402) ENSACIG00000016418 ENSACIG00000016429 ENSACIG00000016433 Pomacentridae ANCESTRAL SPECIES 47 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a Pomacentridae_A ANCESTRAL SPECIES 54 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 Amphiprion ANCESTRAL SPECIES 69 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00670000098179.d.b ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000177139 ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 Clown anemonefish MODERN SPECIES 1934 USP7 (ENSAOCG00000016579) ENSAOCG00000016601 ENSAOCG00000001155 ENSAOCG00000016796 ##22 clcn7 (ENSAOCG00000016976) #23 ENSAOCG00000017065 ENSAOCG00000017092 sun1b (ENSAOCG00000017131) iqck (ENSAOCG00000017180) gprc5ba (ENSAOCG00000017193) proza (ENSAOCG00000017224) GPR139 (ENSAOCG00000017259) ENSAOCG00000001208 Orange clownfish MODERN SPECIES 5 socs1a (ENSAPEG00000013533) PRKCB (ENSAPEG00000013448) ENSAPEG00000013425 CACNG3 (ENSAPEG00000013415) ENSAPEG00000013410 ENSAPEG00000013388 ENSAPEG00000013365 TNRC6A (ENSAPEG00000013317) ndufab1b (ENSAPEG00000013302) ENSAPEG00000013298 dctn5 (ENSAPEG00000013271) ENSAPEG00000013234 USP7 (ENSAPEG00000013134) ENSAPEG00000013109 ENSAPEG00000013066 ENSAPEG00000013057 ##22 clcn7 (ENSAPEG00000012950) #23 ENSAPEG00000012928 ENSAPEG00000012924 ENSAPEG00000012912 ENSAPEG00000012904 ENSAPEG00000012900 ENSAPEG00000012897 ENSAPEG00000012892 ENSAPEG00000012885 ENSAPEG00000012821 ENSAPEG00000012802 ENSAPEG00000012791 ENSAPEG00000012732 sun1b (ENSAPEG00000012687) ENSAPEG00000012647 Spiny chromis MODERN SPECIES 1304 dctn5 (ENSAPOG00000003622) ENSAPOG00000003649 USP7 (ENSAPOG00000003768) si:ch211-157c3.4 (ENSAPOG00000003804) ENSAPOG00000003820 ENSAPOG00000003835 ##22 clcn7 (ENSAPOG00000003895) #23 ENSAPOG00000003907 ENSAPOG00000003937 Bicolor damselfish MODERN SPECIES 807 CACNG3 (ENSSPAG00000013277) ENSSPAG00000013257 ENSSPAG00000013220 ENSSPAG00000013172 ndufab1b (ENSSPAG00000013133) ENSSPAG00000013123 dctn5 (ENSSPAG00000013104) ENSSPAG00000013066 USP7 (ENSSPAG00000012979) si:ch211-157c3.4 (ENSSPAG00000012963) SLC2A6 (ENSSPAG00000012922) ENSSPAG00000012912 ##22 clcn7 (ENSSPAG00000012752) #23 arhgdig (ENSSPAG00000012729) rpusd1 (ENSSPAG00000012708) slc25a17 (ENSSPAG00000012691) znf598 (ENSSPAG00000012675) syngr3a (ENSSPAG00000012657) gfer (ENSSPAG00000012642) drg2 (ENSSPAG00000012603) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a Zig-zag eel MODERN SPECIES 22 dexi (ENSMAMG00000003942) CLEC16A (ENSMAMG00000003956) socs1a (ENSMAMG00000004012) PRKCB (ENSMAMG00000004035) ENSMAMG00000004091 ENSMAMG00000004102 ENSMAMG00000004136 TNRC6A (ENSMAMG00000004159) ENSMAMG00000025489 ndufab1b (ENSMAMG00000004182) ENSMAMG00000004198 ENSMAMG00000004223 ENSMAMG00000004264 si:ch211-157c3.4 (ENSMAMG00000004546) ENSMAMG00000004572 ENSMAMG00000004586 ##22 clcn7 (ENSMAMG00000004606) #23 arhgdig (ENSMAMG00000004713) ENSMAMG00000004735 ENSMAMG00000004745 znf598 (ENSMAMG00000004761) syngr3a (ENSMAMG00000004821) gfer (ENSMAMG00000004839) drg2 (ENSMAMG00000004849) MYO15A (ENSMAMG00000004926) LLGL1 (ENSMAMG00000005057) FLII (ENSMAMG00000005146) ENSMAMG00000005267 ENSMAMG00000005277 ENSMAMG00000005305 ENSMAMG00000005292 Anabantoidei ANCESTRAL SPECIES 7 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014840.a ENSGT01030000234586.A.a.a.b ENSGT00940000156748 ENSGT00940000153909.a ENSGT00390000007101.d.a ENSGT00390000004452 ENSGT00390000018612.a.a ENSGT00560000077365 ENSGT00940000155653.a ENSGT00940000159110.a ENSGT00940000163157.b Climbing perch MODERN SPECIES 21 nubp1 (ENSATEG00000003742) ##11 ENSATEG00000003730 dexi (ENSATEG00000003722) CLEC16A (ENSATEG00000003702) socs1a (ENSATEG00000003694) PRKCB (ENSATEG00000003595) ENSATEG00000003570 ENSATEG00000003539 ENSATEG00000003516 ndufab1b (ENSATEG00000003495) ENSATEG00000003473 ENSATEG00000003435 ENSATEG00000003282 si:ch211-157c3.4 (ENSATEG00000003243) ENSATEG00000003234 ENSATEG00000028831 ##22 clcn7 (ENSATEG00000003023) #23 arhgdig (ENSATEG00000029711) ENSATEG00000002984 ENSATEG00000027799 ENSATEG00000002964 ENSATEG00000002913 ENSATEG00000002905 ENSATEG00000002893 tmem86b (ENSATEG00000002876) aspdh (ENSATEG00000026199) gys1 (ENSATEG00000002788) pold1 (ENSATEG00000002687) zgc:55558 (ENSATEG00000002682) slc17a7a (ENSATEG00000002647) ENSATEG00000002591 Siamese fighting fish MODERN SPECIES 19 dexi (ENSBSLG00000004126) CLEC16A (ENSBSLG00000004181) ENSBSLG00000004423 socs1a (ENSBSLG00000004425) PRKCB (ENSBSLG00000005343) ENSBSLG00000006447 ENSBSLG00000006549 ENSBSLG00000006562 TNRC6A (ENSBSLG00000006781) ndufab1b (ENSBSLG00000007294) dctn5 (ENSBSLG00000007299) ENSBSLG00000007739 USP7 (ENSBSLG00000007955) ENSBSLG00000009156 SLC2A6 (ENSBSLG00000009174) ENSBSLG00000009188 ##22 clcn7 (ENSBSLG00000009283) #23 arhgdig (ENSBSLG00000011002) rpusd1 (ENSBSLG00000011097) slc25a17 (ENSBSLG00000011612) natd1 (ENSBSLG00000011738) KCNJ12 (ENSBSLG00000011824) tufm (ENSBSLG00000011868) hspbp1 (ENSBSLG00000011973) tmem86b (ENSBSLG00000012007) aspdh (ENSBSLG00000012021) gys1 (ENSBSLG00000012086) pold1 (ENSBSLG00000013285) zgc:55558 (ENSBSLG00000013658) slc17a7a (ENSBSLG00000013720) ENSBSLG00000015388 Carangaria ANCESTRAL SPECIES 4 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01060000248913 ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00940000178257 Tongue sole MODERN SPECIES 8 dexi (ENSCSEG00000018784) CLEC16A (ENSCSEG00000018748) socs1a (ENSCSEG00000018742) PRKCB (ENSCSEG00000018731) ENSCSEG00000018723 CACNG3 (ENSCSEG00000018716) ENSCSEG00000018711 ENSCSEG00000018703 TNRC6A (ENSCSEG00000018661) dctn5 (ENSCSEG00000018657) ndufab1b (ENSCSEG00000018650) ENSCSEG00000018641 USP7 (ENSCSEG00000018615) si:ch211-157c3.4 (ENSCSEG00000018607) SLC2A6 (ENSCSEG00000018599) ENSCSEG00000018595 ##22 clcn7 (ENSCSEG00000018548) #23 arhgdig (ENSCSEG00000018530) rpusd1 (ENSCSEG00000018512) slc25a17 (ENSCSEG00000018472) znf598 (ENSCSEG00000018447) syngr3a (ENSCSEG00000018441) gfer (ENSCSEG00000018436) drg2 (ENSCSEG00000018419) ENSCSEG00000018416 ENSCSEG00000018409 ENSCSEG00000018400 LLGL1 (ENSCSEG00000018360) flii (ENSCSEG00000018300) desi1a (ENSCSEG00000018282) ENSCSEG00000018274 Carangaria_A ANCESTRAL SPECIES 12 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a Seriola ANCESTRAL SPECIES 57 ENSGT00940000166211 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00940000167349 ENSGT00390000006233.c.a.a Greater amberjack MODERN SPECIES 89 ENSSDUG00000015408 dexi (ENSSDUG00000015394) CLEC16A (ENSSDUG00000015339) ENSSDUG00000015321 PRKCB (ENSSDUG00000015271) ENSSDUG00000015255 ENSSDUG00000015246 ENSSDUG00000015232 TNRC6A (ENSSDUG00000015208) ndufab1b (ENSSDUG00000015194) dctn5 (ENSSDUG00000015170) ENSSDUG00000015138 USP7 (ENSSDUG00000015030) si:ch211-157c3.4 (ENSSDUG00000015007) SLC2A6 (ENSSDUG00000014990) ENSSDUG00000014974 ##22 clcn7 (ENSSDUG00000014918) #23 ENSSDUG00000014908 arhgdig (ENSSDUG00000014899) ENSSDUG00000014886 ubald2 (ENSSDUG00000014875) ENSSDUG00000014835 mfsd11 (ENSSDUG00000014775) srsf2b (ENSSDUG00000014762) eif1 (ENSSDUG00000014756) ENSSDUG00000014749 ENSSDUG00000014734 fus (ENSSDUG00000014697) arl6ip1 (ENSSDUG00000014691) Yellowtail amberjack MODERN SPECIES 80 ENSSLDG00000001344 ##22 Barramundi perch MODERN SPECIES 41 emp2 (ENSLCAG00010002823) nubp1 (ENSLCAG00010002826) ##11 ENSLCAG00010002831 dexi (ENSLCAG00010002836) CLEC16A (ENSLCAG00010002846) socs1a (ENSLCAG00010002864) PRKCB (ENSLCAG00010002871) ENSLCAG00010002895 TNRC6A (ENSLCAG00010002903) ndufab1b (ENSLCAG00010002907) dctn5 (ENSLCAG00010002910) ENSLCAG00010002916 USP7 (ENSLCAG00010003031) si:ch211-157c3.4 (ENSLCAG00010003629) SLC2A6 (ENSLCAG00010003635) ENSLCAG00010003641 ##22 clcn7 (ENSLCAG00010003692) #23 arhgdig (ENSLCAG00010003915) rpusd1 (ENSLCAG00010003919) slc25a17 (ENSLCAG00010003928) znf598 (ENSLCAG00010003932) syngr3a (ENSLCAG00010003935) gfer (ENSLCAG00010003938) drg2 (ENSLCAG00010003946) ENSLCAG00010003980 LLGL1 (ENSLCAG00010004026) flii (ENSLCAG00010004298) desi1a (ENSLCAG00010005192) ENSLCAG00010005198 ENSLCAG00010005203 Eupercaria ANCESTRAL SPECIES 3 ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00940000167865 ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 268 socs1a (ENSLBEG00000021700) PRKCB (ENSLBEG00000021726) ENSLBEG00000021880 ENSLBEG00000021906 ENSLBEG00000021934 TNRC6A (ENSLBEG00000021964) ndufab1b (ENSLBEG00000022019) dctn5 (ENSLBEG00000022041) ENSLBEG00000022080 USP7 (ENSLBEG00000022138) si:ch211-157c3.4 (ENSLBEG00000022226) si:ch211-157c3.4 (ENSLBEG00000022241) SLC2A6 (ENSLBEG00000022265) ENSLBEG00000022291 ##22 clcn7 (ENSLBEG00000022339) #23 arhgdig (ENSLBEG00000022480) rpusd1 (ENSLBEG00000022502) slc25a17 (ENSLBEG00000022532) znf598 (ENSLBEG00000022566) syngr3a (ENSLBEG00000022613) gfer (ENSLBEG00000022631) STUB1 (ENSLBEG00000022662) ubald2 (ENSLBEG00000022701) mfsd11 (ENSLBEG00000022734) srsf2b (ENSLBEG00000022770) ENSLBEG00000022789 eif1 (ENSLBEG00000022802) zgc:100868 (ENSLBEG00000022831) ENSLBEG00000022856 Ballan wrasse MODERN SPECIES 3394 ENSLBEG00000006121 ENSLBEG00000006144 ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00940000178257 Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a ENSGT00390000015495 Eupercaria_incertae_sedis ANCESTRAL SPECIES 35 ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a ENSGT00390000015495 European seabass MODERN SPECIES 21 ENSDLAG00005026085 emp2 (ENSDLAG00005026086) ENSDLAG00005026096 CLEC16A (ENSDLAG00005026128) dexi (ENSDLAG00005032483) ENSDLAG00005026168 PRKCB (ENSDLAG00005026189) ENSDLAG00005026225 ENSDLAG00005031275 TNRC6A (ENSDLAG00005001401) ndufab1b (ENSDLAG00005001413) ENSDLAG00005033195 ENSDLAG00005001444 ENSDLAG00005001499 ENSDLAG00005030663 ENSDLAG00005033149 ##22 clcn7 (ENSDLAG00005001786) #23 arhgdig (ENSDLAG00005002059) ENSDLAG00005028898 ENSDLAG00005002069 znf598 (ENSDLAG00005002077) syngr3a (ENSDLAG00005027649) gfer (ENSDLAG00005027107) drg2 (ENSDLAG00005002107) ENSDLAG00005031307 MYO15A (ENSDLAG00005002142) LLGL1 (ENSDLAG00005002223) FLII (ENSDLAG00005003732) ENSDLAG00005027415 ENSDLAG00005033123 ENSDLAG00005004198 Large yellow croaker MODERN SPECIES 483 ENSLCRG00005011541 dexi (ENSLCRG00005011540) CLEC16A (ENSLCRG00005011521) socs1a (ENSLCRG00005011506) ENSLCRG00005011493 PRKCB (ENSLCRG00005011439) ENSLCRG00005011436 ENSLCRG00005011435 TNRC6A (ENSLCRG00005011067) ndufab1b (ENSLCRG00005011058) dctn5 (ENSLCRG00005011053) ENSLCRG00005011051 USP7 (ENSLCRG00005009947) si:ch211-157c3.4 (ENSLCRG00005009944) SLC2A6 (ENSLCRG00005009943) ENSLCRG00005009942 ##22 clcn7 (ENSLCRG00005009917) #23 arhgdig (ENSLCRG00005009910) rpusd1 (ENSLCRG00005009908) slc25a17 (ENSLCRG00005009907) znf598 (ENSLCRG00005009903) syngr3a (ENSLCRG00005009901) gfer (ENSLCRG00005009900) drg2 (ENSLCRG00005009889) ENSLCRG00005009888 ENSLCRG00005009884 Gilthead seabream MODERN SPECIES 15 dexi (ENSSAUG00010022391) CLEC16A (ENSSAUG00010022374) socs1a (ENSSAUG00010022372) PRKCB (ENSSAUG00010021140) ENSSAUG00010021128 ENSSAUG00010021126 TNRC6A (ENSSAUG00010021119) ndufab1b (ENSSAUG00010021118) dctn5 (ENSSAUG00010021115) ENSSAUG00010021111 ENSSAUG00010021108 USP7 (ENSSAUG00010020126) ENSSAUG00010020072 si:ch211-157c3.4 (ENSSAUG00010020067) SLC2A6 (ENSSAUG00010020065) ENSSAUG00010020064 ##22 clcn7 (ENSSAUG00010018907) #23 arhgdig (ENSSAUG00010018903) rpusd1 (ENSSAUG00010018902) slc25a17 (ENSSAUG00010018901) znf598 (ENSSAUG00010018900) syngr3a (ENSSAUG00010018899) gfer (ENSSAUG00010018898) drg2 (ENSSAUG00010018879) ENSSAUG00010018876 ENSSAUG00010018875 ENSSAUG00010018873 LLGL1 (ENSSAUG00010016928) flii (ENSSAUG00010016900) desi1a (ENSSAUG00010016899) ENSSAUG00010016895 Perciformes ANCESTRAL SPECIES 1 ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00940000178257 Cottioidei ANCESTRAL SPECIES 1 ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00390000006890 ENSGT00940000157377 ENSGT00940000156292.g.b ENSGT00940000157961.B Lumpfish MODERN SPECIES 23 nubp1 (ENSCLMG00005005730) ##11 CIITA (ENSCLMG00005005770) dexi (ENSCLMG00005005774) CLEC16A (ENSCLMG00005005784) socs1a (ENSCLMG00005005791) PRKCB (ENSCLMG00005005823) CACNG3 (ENSCLMG00005008330) TNRC6A (ENSCLMG00005008334) ndufab1b (ENSCLMG00005008338) dctn5 (ENSCLMG00005008341) ENSCLMG00005008342 USP7 (ENSCLMG00005008359) ENSCLMG00005008861 si:ch211-157c3.4 (ENSCLMG00005008862) SLC2A6 (ENSCLMG00005008864) ENSCLMG00005008867 ##22 clcn7 (ENSCLMG00005008874) #23 arhgdig (ENSCLMG00005008929) rpusd1 (ENSCLMG00005008971) slc25a17 (ENSCLMG00005008972) znf598 (ENSCLMG00005008975) syngr3a (ENSCLMG00005008979) gfer (ENSCLMG00005008986) drg2 (ENSCLMG00005008998) ENSCLMG00005009005 LLGL1 (ENSCLMG00005009009) psmc3ip (ENSCLMG00005009014) mlx (ENSCLMG00005009015) FMNL1 (ENSCLMG00005009029) SRCIN1 (ENSCLMG00005012183) ENSCLMG00005012184 Perciformes_a ANCESTRAL SPECIES 1 ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 ENSGT00940000161578 ENSGT00390000013271 ENSGT00390000013826 ENSGT00940000161164 ENSGT00940000155217.o.b ENSGT01050000244893.c.a.a.a ENSGT00940000158180 ENSGT00390000002127 ENSGT00390000015360 ENSGT00390000002886.a.a.b ENSGT00940000156053 ENSGT00940000155366.b.b.d.b ENSGT00940000159976 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000006233.c.a.a ENSGT00510000048339 ENSGT00920000149129 ENSGT00390000014178 ENSGT00950000182935.B.b.d.a ENSGT00390000001979 ENSGT00940000153340.A ENSGT00940000155335.s.b ENSGT00930000151032.A.c.b ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00730000111100.a.a ENSGT00940000163663.A.a ENSGT00950000182979.a.a.a.a Pike perch DUPLICATION Pike perch MODERN SPECIES 38 ENSSLUG00000013325 emp2 (ENSSLUG00000013319) nubp1 (ENSSLUG00000013167) ##11 CIITA (ENSSLUG00000013136) CLEC16A (ENSSLUG00000013077) socs1a (ENSSLUG00000013064) PRKCB (ENSSLUG00000012164) CACNG3 (ENSSLUG00000012078) TNRC6A (ENSSLUG00000012036) ndufab1b (ENSSLUG00000012003) dctn5 (ENSSLUG00000011993) ENSSLUG00000011984 USP7 (ENSSLUG00000009618) ENSSLUG00000009531 SLC2A6 (ENSSLUG00000009522) ENSSLUG00000009520 ##22 clcn7 (ENSSLUG00000009265) #23 arhgdig (ENSSLUG00000009233) slc25a17 (ENSSLUG00000009224) znf598 (ENSSLUG00000009213) syngr3a (ENSSLUG00000009203) gfer (ENSSLUG00000009200) drg2 (ENSSLUG00000009164) ENSSLUG00000009145 LLGL1 (ENSSLUG00000008507) flii (ENSSLUG00000008405) desi1a (ENSSLUG00000008387) ENSSLUG00000008385 ENSSLUG00000008383 ENSSLUG00000008377 ENSSLUG00000008370 Pike perch MODERN SPECIES 21 slc5a5 (ENSSLUG00000001137) cluap1 (ENSSLUG00000001114) ccdc124 (ENSSLUG00000001108) KCNN1 (ENSSLUG00000001092) uhrf1 (ENSSLUG00000001039) kdm4b (ENSSLUG00000000972) PTPRS (ENSSLUG00000000739) tbxa2r (ENSSLUG00000000625) gipc3 (ENSSLUG00000000615) ENSSLUG00000000606 lim2.2 (ENSSLUG00000000581) wdr47b (ENSSLUG00000000527) camsap2a (ENSSLUG00000000503) ddx59 (ENSSLUG00000000469) kif14 (ENSSLUG00000000361) ENSSLUG00000000309 ##22 ENSSLUG00000026074 nr5a2 (ENSSLUG00000026073) zgc:85936 (ENSSLUG00000026072) alpi.2 (ENSSLUG00000026071) alpi.1 (ENSSLUG00000026070) ENSSLUG00000026069 nppc (ENSSLUG00000026068) ncl (ENSSLUG00000026062) b3gnt7 (ENSSLUG00000026060) ARMC9 (ENSSLUG00000026059) polr2h (ENSSLUG00000026058) ENSSLUG00000026057 EPHB3 (ENSSLUG00000026056) HYKK (ENSSLUG00000026054) HYKK (ENSSLUG00000026053) Gnathostomata ANCESTRAL SPECIES 66 ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00940000163876 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885 ENSGT00390000000087 ENSGT00390000002918.a.a ENSGT00390000000022.a ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a ENSGT00940000165626 ENSGT00940000160939 Euteleostomi ANCESTRAL SPECIES 320 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 ENSGT00940000160939 Actinopterygii ANCESTRAL SPECIES 6 ENSGT01050000244814.a.a.a.a ENSGT00940000159138 ENSGT00940000158310 ENSGT00940000163876 ENSGT00940000160685 ENSGT00390000011615.B ENSGT00510000048539 ENSGT00550000074885 ENSGT00390000000087 ENSGT00390000002918.a.a ENSGT00390000000022.a ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.b.b ##22 ENSGT00940000158458 #23 ENSGT00390000002827 ENSGT00940000160060 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00940000155366.b.b ENSGT00940000156053 ENSGT00390000002886.b.a ENSGT00940000156222.a.a ENSGT00530000063707.b ENSGT00950000182696.A.b ENSGT00950000183193.A.c.a ##11 ENSGT00390000004428.b ENSGT00940000161578 Reedfish DUPLICATION Reedfish MODERN SPECIES 2 fbxl16 (ENSECRG00000017654) ENSECRG00000017721 ENSECRG00000017806 zgc:153896 (ENSECRG00000017871) rbfox1 (ENSECRG00000018032) TMEM114 (ENSECRG00000018129) mettl22 (ENSECRG00000018162) abat (ENSECRG00000018197) tmem186 (ENSECRG00000018238) pmm2 (ENSECRG00000018255) carhsp1 (ENSECRG00000018282) nat15 (ENSECRG00000018304) ints15 (ENSECRG00000018331) dnase1 (ENSECRG00000018373) eci1 (ENSECRG00000018396) ENSECRG00000018425 ##22 clcn7 (ENSECRG00000018463) #23 ENSECRG00000018517 pgap6 (ENSECRG00000018530) ENSECRG00000018566 rgs11 (ENSECRG00000018636) arhgdig (ENSECRG00000018736) ENSECRG00000018757 ENSECRG00000018777 ENSECRG00000018794 si:ch211-157c3.4 (ENSECRG00000018814) USP7 (ENSECRG00000018912) hapstr1a (ENSECRG00000019279) GRIN2A (ENSECRG00000019325) ENSECRG00000019398 emp2 (ENSECRG00000019432) Reedfish MODERN SPECIES 194 ENSECRG00000021903 ##22 Sarcopterygii ANCESTRAL SPECIES 309 ENSGT00390000008314 ENSGT00390000011370 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263515.b ##22 ENSGT01100000263515.a.a #22 ENSGT00940000158458 #23 ENSGT00390000002278 #24 ENSGT00390000002827 ENSGT00940000160060 ENSGT00940000160198 ENSGT00390000006233.c.a.a ENSGT00940000165626 Coelacanth MODERN SPECIES 923 dnase1 (ENSLACG00000014377) ECI1 (ENSLACG00000014230) ENSLACG00000014162 ##22 CLCN7 (ENSLACG00000013303) #23 ENSLACG00000022418 #24 PERCC1 (ENSLACG00000012692) PGAP6 (ENSLACG00000012144) RGS11 (ENSLACG00000010264) ENSLACG00000007716 pdia2 (ENSLACG00000006605) HMOX2 (ENSLACG00000005680) DNAJA3 (ENSLACG00000004771) ENSLACG00000003132 Elephant shark MODERN SPECIES 1515 flr (ENSCMIG00000011002) si:ch211-76l23.7 (ENSCMIG00000010876) alg1 (ENSCMIG00000010859) FAM86B2 (ENSCMIG00000010849) zgc:153896 (ENSCMIG00000010845) ENSCMIG00000010809 TMEM114 (ENSCMIG00000010800) mettl22 (ENSCMIG00000010797) abat (ENSCMIG00000010763) tmem186 (ENSCMIG00000010738) pmm2 (ENSCMIG00000010721) carhsp1 (ENSCMIG00000010712) ints15 (ENSCMIG00000010707) ENSCMIG00000010704 eci1 (ENSCMIG00000010696) ENSCMIG00000010690 ##22 clcn7 (ENSCMIG00000010674) #23 ENSCMIG00000010662 rgs11 (ENSCMIG00000010639) arhgdig (ENSCMIG00000010621) pdia2 (ENSCMIG00000010617) ENSCMIG00000010611 GPR139 (ENSCMIG00000010607) gprc5ba (ENSCMIG00000010603) ENSCMIG00000010600 ENSCMIG00000010593 vps35l (ENSCMIG00000010416) CCP110 (ENSCMIG00000010325) gde1 (ENSCMIG00000010314) ENSCMIG00000010310 TMC7 (ENSCMIG00000010292) Cyclostomata ANCESTRAL SPECIES 148 ENSGT00390000005678 ENSGT01100000263515 #22 ENSGT00940000158458 #23 Hagfish MODERN SPECIES 772 ENSEBUG00000006942 ENSEBUG00000010231 ENSEBUG00000006692 ENSEBUG00000003647 PTX4 (ENSEBUG00000014836) #22 clcn7 (ENSEBUG00000004864) #23 ENSEBUG00000014525 ENSEBUG00000014592 ENSEBUG00000016180 ENSEBUG00000007911 ENSEBUG00000009708 tmem178bb (ENSEBUG00000001217) ENSEBUG00000003485 ENSEBUG00000016585 ENSEBUG00000001880 ENSEBUG00000003975 large1 (ENSEBUG00000008593) ENSEBUG00000010556 ENSEBUG00000002417