Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Elephant shark	MODERN SPECIES	1529	ENSCMIG00000004823	ARHGAP32 (ENSCMIG00000004814)	KCNJ5 (ENSCMIG00000004801)	kcnj1a.6 (ENSCMIG00000004788)	fli1 (ENSCMIG00000004779)	ets1 (ENSCMIG00000004760)	KIRREL3 (ENSCMIG00000004743)	ENSCMIG00000004730	st3gal4 (ENSCMIG00000004716)	dcps (ENSCMIG00000004710)	TIRAP (ENSCMIG00000004708)	foxred1 (ENSCMIG00000004701)	srpra (ENSCMIG00000004659)	FAM118B (ENSCMIG00000004633)	ilvbl (ENSCMIG00000004455)	ENSCMIG00000004396 ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Actinopterygii	ANCESTRAL SPECIES	127											ENSGT00990000203527.b	ENSGT00990000203527.a.a.a	ENSGT00940000160467	ENSGT00940000160704.b	ENSGT00390000009936	ENSGT01100000263551.b.b.a ##22	ENSGT00950000183066.a.a.a	ENSGT01020000230438.B.a.a	ENSGT01100000263535.a.b	ENSGT00530000063991.b.a	ENSGT00950000183058.B	ENSGT01020000230346.D	ENSGT00940000164072	ENSGT01020000230438.A	ENSGT00390000010337.A	ENSGT00950000182952.E	ENSGT00950000182904.a.a.b	ENSGT00940000166443	ENSGT00390000003568	ENSGT00950000183007.b	ENSGT00940000163304
Neopterygii	ANCESTRAL SPECIES	278												ENSGT00390000006949	ENSGT00900000141067	ENSGT01050000244848.B.a.a	ENSGT00730000110915.a	ENSGT01100000263551.b.b.a ##22	ENSGT00940000157114	ENSGT00940000159682	ENSGT00940000158740	ENSGT00530000063252.a.a	ENSGT00940000164481.b.b	ENSGT00940000165538	ENSGT00390000016213	ENSGT00940000157181
Osteoglossocephalai	ANCESTRAL SPECIES	4	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000161366	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256	ENSGT00950000182894.D	ENSGT00990000203527.b	ENSGT00990000203527.a.a.a.e	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00940000179505	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263573.a.a.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b	ENSGT00390000004140.a	ENSGT00940000159046.C	ENSGT00940000172339
Clupeocephala	ANCESTRAL SPECIES		ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00940000155256.d.a.b	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b
Otomorpha	ANCESTRAL SPECIES	152	ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c	ENSGT00940000155256.d.a.b	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263535.b.a.a.a.b.b	ENSGT01100000263535.b.a.a.a.b.a	ENSGT01030000234968	ENSGT01100000263573.a.a.a	ENSGT00940000173371
Clupeiformes	ANCESTRAL SPECIES	18	ENSGT00440000034259.b	ENSGT00940000166008	ENSGT00940000158694	ENSGT00940000154175	ENSGT00510000047559	ENSGT00940000161966	ENSGT00940000155492.a.a	ENSGT00950000183204.a.a.a.b	ENSGT00950000183204.a.a.a.a	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00390000014500	ENSGT00390000012429	ENSGT00940000156933.d.b	ENSGT01100000263551.b.b.a ##22	ENSGT00940000168885	ENSGT00940000159682	ENSGT00950000182903.b.b.p	ENSGT00740000117097	ENSGT00940000161288	ENSGT00940000157434.d	ENSGT00390000002905	ENSGT00950000182767.b.a.b.b.b	ENSGT00940000160797	ENSGT00390000012668.h	ENSGT00390000003308.b	ENSGT00390000008196	ENSGT00940000163496.b.a	ENSGT00940000160701	ENSGT00950000183090.D
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	14	ENSDCDG00000029313	ENSDCDG00000029310	fzd1 (ENSDCDG00000029308)	cdk14 (ENSDCDG00000029100)	ENSDCDG00000029088	ENSDCDG00000029086	ADGRB1 (ENSDCDG00000028645)	ENSDCDG00000028603	ENSDCDG00000028601 ##12	si:ch211-198c19.1 (ENSDCDG00000028594)	ggctb (ENSDCDG00000028586)	SLC6A20 (ENSDCDG00000028577)	SNRPD1 (ENSDCDG00000028575)	sacm1lb (ENSDCDG00000028221)	AGO1 (ENSDCDG00000027044)	ENSDCDG00000026985 ##22	nop2 (ENSDCDG00000026597)	gtf3c6 (ENSDCDG00000026593)	emg1 (ENSDCDG00000026592)	zyx (ENSDCDG00000026591)	FAM131B (ENSDCDG00000026588)	CLCN1 (ENSDCDG00000021927)	casp2 (ENSDCDG00000021843)	ENSDCDG00000021837	GSTK1 (ENSDCDG00000021800)	MYLK (ENSDCDG00000021733)	ENSDCDG00000019672	arl6ip6 (ENSDCDG00000019579)	KCNJ3 (ENSDCDG00000019577)	ino80db (ENSDCDG00000019570)	ndufs1 (ENSDCDG00000019539)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	16	btg4 (ENSDCDG00000019043)	bckdk (ENSDCDG00000019089)	alkbh4 (ENSDCDG00000005029)	polr2j (ENSDCDG00000005033)	castor2 (ENSDCDG00000005098)	DOC2B (ENSDCDG00000005127)	tmem248 (ENSDCDG00000005164)	rad51d (ENSDCDG00000005166)	crcp (ENSDCDG00000005168)	slc35f2 (ENSDCDG00000005175)	CUL5 (ENSDCDG00000005181)	CAPN5 (ENSDCDG00000005196)	nectin1a (ENSDCDG00000005517)	ENSDCDG00000005520 ##22	ENSDCDG00000005523	ENSDCDG00000005534 ##22	ENSDCDG00000005578	chek1 (ENSDCDG00000005581)	dlat (ENSDCDG00000005590)	ENSDCDG00000005600	ENSDCDG00000005607	msi2a (ENSDCDG00000005614)	gphnb (ENSDCDG00000005811)	ENSDCDG00000007706	elp3 (ENSDCDG00000007728)	hsp90ab1 (ENSDCDG00000008304)	rbm25b (ENSDCDG00000011916)	atp6v1d (ENSDCDG00000012010)	pals1b (ENSDCDG00000012372)	ENSDCDG00000013671	pals1b (ENSDCDG00000013681)
Denticle herring	MODERN SPECIES	16	HEPACAM (ENSDCDG00000019031) ##22	nrgna (ENSDCDG00000019034)	btg4 (ENSDCDG00000019043)	bckdk (ENSDCDG00000019089)	alkbh4 (ENSDCDG00000005029)	polr2j (ENSDCDG00000005033)	castor2 (ENSDCDG00000005098)	DOC2B (ENSDCDG00000005127)	tmem248 (ENSDCDG00000005164)	rad51d (ENSDCDG00000005166)	crcp (ENSDCDG00000005168)	slc35f2 (ENSDCDG00000005175)	CUL5 (ENSDCDG00000005181)	CAPN5 (ENSDCDG00000005196)	nectin1a (ENSDCDG00000005517)	ENSDCDG00000005520 ##22	ENSDCDG00000005523	ENSDCDG00000005534 ##22	ENSDCDG00000005578	chek1 (ENSDCDG00000005581)	dlat (ENSDCDG00000005590)	ENSDCDG00000005600	ENSDCDG00000005607	msi2a (ENSDCDG00000005614)	gphnb (ENSDCDG00000005811)	ENSDCDG00000007706	elp3 (ENSDCDG00000007728)	hsp90ab1 (ENSDCDG00000008304)	rbm25b (ENSDCDG00000011916)	atp6v1d (ENSDCDG00000012010)	pals1b (ENSDCDG00000012372)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	2	TMEM158 (ENSCHAG00000009004)	ENSCHAG00000008995	ENSCHAG00000008927	snrnp48 (ENSCHAG00000008916)	sri (ENSCHAG00000008907)	ENSCHAG00000008866	prdm1a (ENSCHAG00000008829)	atg5 (ENSCHAG00000008806)	gabpb2b (ENSCHAG00000008795)	ENSCHAG00000008785	sema6e (ENSCHAG00000007943)	ENSCHAG00000007907	AGO3 (ENSCHAG00000007795)	ENSCHAG00000007756	ENSCHAG00000007739	ENSCHAG00000007695 ##22	ENSCHAG00000007679	ENSCHAG00000007653	ENSCHAG00000007644	ENSCHAG00000007623	ENSCHAG00000007609	ENSCHAG00000007601	iglon5 (ENSCHAG00000007552)	ENSCHAG00000007534	USF2 (ENSCHAG00000007474)	ENSCHAG00000007455	etfb (ENSCHAG00000007422)	ENSCHAG00000007408	lim2.5 (ENSCHAG00000007372)	ENSCHAG00000007350	ENSCHAG00000007336
Atlantic herring	MODERN SPECIES	24	birc2 (ENSCHAG00000026319)	cfap300 (ENSCHAG00000026330)	ANGPTL5 (ENSCHAG00000026333)	trpc6a (ENSCHAG00000026353)	arhgap42a (ENSCHAG00000026472)	FBXO40 (ENSCHAG00000026526)	fbxo40.1 (ENSCHAG00000026529)	c1qa (ENSCHAG00000026531)	ENSCHAG00000026535	bud13 (ENSCHAG00000026540)	ENSCHAG00000026543	ENSCHAG00000026546	gig2p (ENSCHAG00000026547)	ENSCHAG00000026551	nectin1a (ENSCHAG00000026555)	ENSCHAG00000026558 ##22	ENSCHAG00000026563	chek1 (ENSCHAG00000026565)	dlat (ENSCHAG00000026577)	DIXDC1 (ENSCHAG00000000309)	ENSCHAG00000000361	zgc:193711 (ENSCHAG00000000403)	hspb2 (ENSCHAG00000000425)	cryabb (ENSCHAG00000000449)	cfap68 (ENSCHAG00000000498)	mia (ENSCHAG00000000606)	bicdl2 (ENSCHAG00000000690)	TOMM40L (ENSCHAG00000000766)	ufc1 (ENSCHAG00000000800)	fdxacb1 (ENSCHAG00000000852)	alg9 (ENSCHAG00000001114)
Otophysi	ANCESTRAL SPECIES	1	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT01030000234518.D	ENSGT00950000183115.b.b	ENSGT00940000161206	ENSGT00940000166733	ENSGT00940000162488.a	ENSGT00950000182802.D	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c	ENSGT00390000012224	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b.bb	ENSGT00940000176137	ENSGT00390000008096.C.a	ENSGT00940000155660.b	ENSGT00940000156439.d	ENSGT00530000063609.b.w
Characiphysae	DUPLICATION
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	23	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000159828.a	ENSGT00390000014500	ENSGT00940000163496.a.j	ENSGT00940000163496.b.b.b	ENSGT00390000012429	ENSGT00940000156933.d.b.c	ENSGT00940000163088.a.a	ENSGT00940000163088.a.b	ENSGT00940000168885.c	ENSGT00940000163088.b	ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22	ENSGT00940000159682	ENSGT00970000193642	ENSGT00940000155402.a.b	ENSGT00990000204705	ENSGT00390000018651.a	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000156251.b	ENSGT00940000155350.h	ENSGT00940000156536.e.a.j	ENSGT00390000015655.a.m.b	ENSGT00940000159782.b	ENSGT00940000155677.b	ENSGT00390000015701	ENSGT00950000182944.A.a.a
Characiphysae_b	ANCESTRAL SPECIES	349														ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22
Characoidei	ANCESTRAL SPECIES	495														ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	343				lmbrd2b (ENSPNAG00000015705)	skp2 (ENSPNAG00000015719)	nadk2 (ENSPNAG00000015787)	bud13 (ENSPNAG00000015803)	ENSPNAG00000015811	ENSPNAG00000015816	ENSPNAG00000015845	ENSPNAG00000015853	ENSPNAG00000015860	NECTIN1 (ENSPNAG00000015876)	ENSPNAG00000015919 ##22	ENSPNAG00000016039 ##22	ENSPNAG00000016058 ##22	chek1 (ENSPNAG00000016155)	cfap53 (ENSPNAG00000016196)	myo5b (ENSPNAG00000016264)	il7r (ENSPNAG00000016278)	capslb (ENSPNAG00000016284)	ENSPNAG00000016308	MYO7A (ENSPNAG00000016536)	ENSPNAG00000016576	slc35f2 (ENSPNAG00000016587)	CAPN5 (ENSPNAG00000016661)	elmod1 (ENSPNAG00000016782)	gria4b (ENSPNAG00000003456)	ENSPNAG00000017011	defbl2 (ENSPNAG00000017019)	wdr73 (ENSPNAG00000017053)
Red-bellied piranha	MODERN SPECIES	343					lmbrd2b (ENSPNAG00000015705)	skp2 (ENSPNAG00000015719)	nadk2 (ENSPNAG00000015787)	bud13 (ENSPNAG00000015803)	ENSPNAG00000015811	ENSPNAG00000015816	ENSPNAG00000015845	ENSPNAG00000015853	ENSPNAG00000015860	NECTIN1 (ENSPNAG00000015876)	ENSPNAG00000015919 ##22	ENSPNAG00000016039 ##22	ENSPNAG00000016058 ##22	chek1 (ENSPNAG00000016155)	cfap53 (ENSPNAG00000016196)	myo5b (ENSPNAG00000016264)	il7r (ENSPNAG00000016278)	capslb (ENSPNAG00000016284)	ENSPNAG00000016308	MYO7A (ENSPNAG00000016536)	ENSPNAG00000016576	slc35f2 (ENSPNAG00000016587)	CAPN5 (ENSPNAG00000016661)	elmod1 (ENSPNAG00000016782)	gria4b (ENSPNAG00000003456)	ENSPNAG00000017011	defbl2 (ENSPNAG00000017019)
Channel catfish	MODERN SPECIES	9	arhgap42 (ENSIPUG00000001267)	ENSIPUG00000001429	FBXO40 (ENSIPUG00000001433)	fbxo40.1 (ENSIPUG00000001440)	c1qa (ENSIPUG00000001461)	c1qc (ENSIPUG00000001469)	C1QB (ENSIPUG00000001475)	bud13 (ENSIPUG00000001490)	gig2e (ENSIPUG00000001510)	ENSIPUG00000001531	ENSIPUG00000001534	nectin1a (ENSIPUG00000001540)	ENSIPUG00000001582	ENSIPUG00000001592	ENSIPUG00000001611 ##22	ENSIPUG00000001671 ##22	chek1 (ENSIPUG00000001680)	cfap53 (ENSIPUG00000001709)	myo5b (ENSIPUG00000001724)	il7r (ENSIPUG00000001777)	capslb (ENSIPUG00000001802)	lmbrd2b (ENSIPUG00000001814)	skp2 (ENSIPUG00000001858)	nadk2 (ENSIPUG00000001868)	MYO7A (ENSIPUG00000001886)	CAPN5 (ENSIPUG00000001939)	slc35f2 (ENSIPUG00000001958)	elmod1 (ENSIPUG00000001979)	gria4b (ENSIPUG00000002027)	ENSIPUG00000002077	defbl2 (ENSIPUG00000002102)
Characiphysae	ANCESTRAL SPECIES	23	ENSGT00950000183204.a.a.a.a	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000159828.a	ENSGT00390000014500	ENSGT00940000163496.a.j	ENSGT00940000163496.b.b.b	ENSGT00390000012429	ENSGT00940000156933.d.b.c	ENSGT00940000163088.a.a	ENSGT00940000163088.a.b	ENSGT00940000168885.c	ENSGT00940000163088.b	ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22	ENSGT00940000159682	ENSGT00970000193642	ENSGT00940000155402.a.b	ENSGT00990000204705	ENSGT00390000018651.a	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000156251.b	ENSGT00940000155350.h	ENSGT00940000156536.e.a.j	ENSGT00390000015655.a.m.b	ENSGT00940000159782.b	ENSGT00940000155677.b	ENSGT00390000015701
Characiphysae_b	ANCESTRAL SPECIES	349															ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22
Characoidei	ANCESTRAL SPECIES	495															ENSGT00940000156933.d.b.d	ENSGT01100000263551.b.b.a.e.b ##22	ENSGT01100000263551.b.b.a.e.a ##22
Red-bellied piranha	MODERN SPECIES	343						lmbrd2b (ENSPNAG00000015705)	skp2 (ENSPNAG00000015719)	nadk2 (ENSPNAG00000015787)	bud13 (ENSPNAG00000015803)	ENSPNAG00000015811	ENSPNAG00000015816	ENSPNAG00000015845	ENSPNAG00000015853	ENSPNAG00000015860	NECTIN1 (ENSPNAG00000015876)	ENSPNAG00000015919 ##22	ENSPNAG00000016039 ##22	ENSPNAG00000016058 ##22	chek1 (ENSPNAG00000016155)	cfap53 (ENSPNAG00000016196)	myo5b (ENSPNAG00000016264)	il7r (ENSPNAG00000016278)	capslb (ENSPNAG00000016284)	ENSPNAG00000016308	MYO7A (ENSPNAG00000016536)	ENSPNAG00000016576	slc35f2 (ENSPNAG00000016587)	CAPN5 (ENSPNAG00000016661)	elmod1 (ENSPNAG00000016782)	gria4b (ENSPNAG00000003456)	ENSPNAG00000017011
Channel catfish	MODERN SPECIES	9	trpc6 (ENSIPUG00000001201)	arhgap42 (ENSIPUG00000001267)	ENSIPUG00000001429	FBXO40 (ENSIPUG00000001433)	fbxo40.1 (ENSIPUG00000001440)	c1qa (ENSIPUG00000001461)	c1qc (ENSIPUG00000001469)	C1QB (ENSIPUG00000001475)	bud13 (ENSIPUG00000001490)	gig2e (ENSIPUG00000001510)	ENSIPUG00000001531	ENSIPUG00000001534	nectin1a (ENSIPUG00000001540)	ENSIPUG00000001582	ENSIPUG00000001592	ENSIPUG00000001611 ##22	ENSIPUG00000001671 ##22	chek1 (ENSIPUG00000001680)	cfap53 (ENSIPUG00000001709)	myo5b (ENSIPUG00000001724)	il7r (ENSIPUG00000001777)	capslb (ENSIPUG00000001802)	lmbrd2b (ENSIPUG00000001814)	skp2 (ENSIPUG00000001858)	nadk2 (ENSIPUG00000001868)	MYO7A (ENSIPUG00000001886)	CAPN5 (ENSIPUG00000001939)	slc35f2 (ENSIPUG00000001958)	elmod1 (ENSIPUG00000001979)	gria4b (ENSIPUG00000002027)	ENSIPUG00000002077
Characiphysae	ANCESTRAL SPECIES	37												ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT01100000263551.b.b.a.f ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT01100000263535.b.a.b.ab.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b.bb	ENSGT00940000161037	ENSGT00940000155168.a.a	ENSGT00940000165358	ENSGT00940000160242.a	ENSGT00940000154337.a.a	ENSGT00530000063528.A.b	ENSGT00390000004145.a	ENSGT00390000008096.C.a	ENSGT00940000155660.b
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	15	ENSIPUG00000023202	DHDDS (ENSIPUG00000023206)	ago1 (ENSIPUG00000023216)	ENSIPUG00000023241	ENSIPUG00000023249	ENSIPUG00000023251	ENSIPUG00000023253 ##22	Ffar2 (ENSIPUG00000023259)	ENSIPUG00000023261	ENSIPUG00000023265	Ffar3 (ENSIPUG00000023266)	Iglon5 (ENSIPUG00000023269)	hamp (ENSIPUG00000023275)	usf2 (ENSIPUG00000023283)	ETFB (ENSIPUG00000023288)	vsig10l (ENSIPUG00000023300) ##22	lim2 (ENSIPUG00000023306)	ENSIPUG00000023307	ENSIPUG00000023311	ENSIPUG00000023320	nek10 (ENSIPUG00000023337)	Nr1d2 (ENSIPUG00000023370)	ube2e2 (ENSIPUG00000023378)	znf385d (ENSIPUG00000023386)	rab5ab (ENSIPUG00000023392)	efhb (ENSIPUG00000023422)	satb1 (ENSIPUG00000023428)	ENSIPUG00000023470	plcl2 (ENSIPUG00000005047)	ENSIPUG00000005071	RFTN1 (ENSIPUG00000005084)
Channel catfish	MODERN SPECIES	15	ENSIPUG00000023118	fabp10a (ENSIPUG00000023125)	myom3 (ENSIPUG00000023143)	ENSIPUG00000023167	man1c1 (ENSIPUG00000023172)	SLC9A1 (ENSIPUG00000023185)	fam110d (ENSIPUG00000023194)	C1orf232 (ENSIPUG00000023197)	ENSIPUG00000023200	ENSIPUG00000023202	DHDDS (ENSIPUG00000023206)	ago1 (ENSIPUG00000023216)	ENSIPUG00000023241	ENSIPUG00000023249	ENSIPUG00000023251	ENSIPUG00000023253 ##22	Ffar2 (ENSIPUG00000023259)	ENSIPUG00000023261	ENSIPUG00000023265	Ffar3 (ENSIPUG00000023266)	Iglon5 (ENSIPUG00000023269)	hamp (ENSIPUG00000023275)	usf2 (ENSIPUG00000023283)	ETFB (ENSIPUG00000023288)	vsig10l (ENSIPUG00000023300) ##22	lim2 (ENSIPUG00000023306)	ENSIPUG00000023307	ENSIPUG00000023311	ENSIPUG00000023320	nek10 (ENSIPUG00000023337)	Nr1d2 (ENSIPUG00000023370)
Characiphysae_b	ANCESTRAL SPECIES	242										ENSGT00990000203527.a.a.a.e.a.d	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT01100000263551.b.b.a.f ##22	ENSGT00990000203527.a.a.a.e.a.c	ENSGT01100000263535.b.a.b.ab.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a
Electric eel	MODERN SPECIES	646											ENSEEEG00000020585	iglon5 (ENSEEEG00000020588)	ENSEEEG00000020593	ENSEEEG00000020595	etfb (ENSEEEG00000020601)	ENSEEEG00000020613 ##22	ENSEEEG00000020614	lim2.5 (ENSEEEG00000020616)	ENSEEEG00000020617
Characoidei	ANCESTRAL SPECIES	160										ENSGT00990000203527.a.a.a.e.a.d	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT01100000263551.b.b.a.f ##22	ENSGT00990000203527.a.a.a.e.a.c.a	ENSGT01100000263535.b.a.b.ab.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b.bb	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000160311.a.a	ENSGT00390000015719.c.c	ENSGT00390000016565.g	ENSGT00940000154868.a.b.b	ENSGT00390000007371.f
Red-bellied piranha	MODERN SPECIES	496																ENSPNAG00000029619 ##22	ENSPNAG00000004661	ENSPNAG00000004663	ENSPNAG00000004668	ENSPNAG00000029646	ENSPNAG00000006890	ENSPNAG00000005070	iglon5 (ENSPNAG00000029662)	ENSPNAG00000029665	ENSPNAG00000029683	etfb (ENSPNAG00000007471)
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	1	pus3 (ENSAMXG00000019534)	grnb (ENSAMXG00000019572)	ENSAMXG00000034609	arf2b (ENSAMXG00000037485)	GRB7 (ENSAMXG00000019623)	SRCIN1 (ENSAMXG00000019651)	ENSAMXG00000019668	ENSAMXG00000038901	ENSAMXG00000042613	ENSAMXG00000025831	iglon5 (ENSAMXG00000017059)	ENSAMXG00000033950	ENSAMXG00000040073	ENSAMXG00000042181	etfb (ENSAMXG00000042160)	ENSAMXG00000036279 ##22	ENSAMXG00000035808	lim2.5 (ENSAMXG00000009562)	ENSAMXG00000043716	ENSAMXG00000033097	ENSAMXG00000002408	ENSAMXG00000002707	ENSAMXG00000032488	ENSAMXG00000033376	ENSAMXG00000029130	tssk6 (ENSAMXG00000025084)	PTPRM (ENSAMXG00000018077)	lrrc30a (ENSAMXG00000031926)	lama1 (ENSAMXG00000018112)	ARHGAP28 (ENSAMXG00000018184)	L3MBTL4 (ENSAMXG00000018187)
Mexicana tetra	MODERN SPECIES	575								CCR8 (ENSAMXG00000035724)	CCR8 (ENSAMXG00000043531)	ENSAMXG00000036847	ENSAMXG00000042912	CCR8 (ENSAMXG00000037541)	ENSAMXG00000002418	ENSAMXG00000029815	ENSAMXG00000033687	ENSAMXG00000033619 ##22
Cyprinoidei	ANCESTRAL SPECIES	25			ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00940000154835.C.eb.b	ENSGT00990000204292	ENSGT00950000182802.D	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.a.b	ENSGT00940000155256.c	ENSGT00390000012224	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a.h	ENSGT00990000203527.a.a.a.e.a.g.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00940000161037	ENSGT00940000155168.a.a	ENSGT01070000256195	ENSGT00940000160242.a	ENSGT00940000154337.a.a.d
Zebrafish	MODERN SPECIES	7	pdcl (ENSDARG00000009480)	rpl28 (ENSDARG00000005791)	SLC9A1 (ENSDARG00000067784)	fam110d (ENSDARG00000062517)	C16H1orf232 (ENSDARG00000103312)	serpinb1l4 (ENSDARG00000096888)	zgc:173729 (ENSDARG00000057263)	serpinb1l1 (ENSDARG00000095830)	ENSDARG00000091801	hmgn2 (ENSDARG00000099572)	dhdds (ENSDARG00000039851)	ago1 (ENSDARG00000092644)	ENSDARG00000059888	ENSDARG00000098129	ENSDARG00000100886	ENSDARG00000104656 ##22	ENSDARG00000079661	ENSDARG00000097901	iglon5 (ENSDARG00000022176)	hamp (ENSDARG00000102175)	etfb (ENSDARG00000009250)	ENSDARG00000089237	lim2.5 (ENSDARG00000041295)	ENSDARG00000041292	NEK10 (ENSDARG00000025335)	nr1d2a (ENSDARG00000003820)	ube2e2 (ENSDARG00000034670)	ZNF385D (ENSDARG00000086162)	rab5ab (ENSDARG00000007257)	efhb (ENSDARG00000069703)	si:dkey-82o10.4 (ENSDARG00000101526)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	201	ENSGT00940000162143.i	ENSGT00940000161227.a	ENSGT00940000159828.a	ENSGT00390000014500	ENSGT00940000163496.a.j.a.b	ENSGT00390000012429	ENSGT00940000163496.a.j.b.b	ENSGT00940000163496.a.j.b.a.a.b	ENSGT00390000012352.b	ENSGT00940000156933.d.b.b	ENSGT00940000163496.a.j.a.a	ENSGT00940000156933.d.b.a	ENSGT00940000168885.d	ENSGT00940000163088.a.b	ENSGT00940000159682.i	ENSGT01100000263551.b.b.a.g.a ##22	ENSGT00940000159682.j	ENSGT00970000193642	ENSGT00940000155402.a.b.e.b	ENSGT00990000204705.a	ENSGT00390000018651.a.g	ENSGT00390000007918.b	ENSGT00390000006320.t	ENSGT00940000156251.b	ENSGT00940000155350.h.f	ENSGT00390000009497.a.e	ENSGT00940000156536.e.a.j.b	ENSGT00940000156648.f.a	ENSGT00390000015655.a.m.b.f	ENSGT00940000159782.b.j	ENSGT00940000155677.b.l
Cyprininae_a	ANCESTRAL SPECIES	33	ENSGT00940000155453.cb	ENSGT00440000034259.b.d	ENSGT00940000165087	ENSGT00940000158694	ENSGT00940000154175.a	ENSGT00510000047559.e	ENSGT00940000161966.a	ENSGT01060000248588.a.d.a.h.b.b	ENSGT00940000155492.a.a.a	ENSGT00950000183204.a.a.a.b	ENSGT00390000012352.b.b	ENSGT00940000156933.d.b.a	ENSGT00940000168885.d	ENSGT00940000163088.a.b	ENSGT00940000159682.i	ENSGT01100000263551.b.b.a.g.a ##22	ENSGT00940000159682.j	ENSGT00970000193642	ENSGT00940000155402.a.b.e.a	ENSGT00990000204705.b	ENSGT00940000156466.eb	ENSGT00390000018651.a.h	ENSGT00390000007918.a	ENSGT00390000006320.s	ENSGT00940000155350.h.e	ENSGT00390000009497.a.f	ENSGT00940000156536.e.a.j.a	ENSGT00940000156648.f.b	ENSGT00390000015655.a.m.b.e	ENSGT00940000159782.b.i	ENSGT00940000155677.b.k
Golden-line barbel	MODERN SPECIES	427	birc2 (ENSSGRG00000016197)	ANGPTL5 (ENSSGRG00000016191)	trpc6a (ENSSGRG00000015688)	arhgap42a (ENSSGRG00000015534)	fbxo40.1 (ENSSGRG00000015509)	c1qa (ENSSGRG00000015507)	c1qc (ENSSGRG00000015506)	c1qb (ENSSGRG00000015505)	bud13 (ENSSGRG00000015500)	gig2d (ENSSGRG00000015498)	ENSSGRG00000015496	gig2l (ENSSGRG00000015495)	ENSSGRG00000015494	ENSSGRG00000015493	nectin1a (ENSSGRG00000015491)	ENSSGRG00000015490 ##22	chek1 (ENSSGRG00000015468)	cfap53 (ENSSGRG00000015455)	myo5b (ENSSGRG00000014532)	il7r (ENSSGRG00000014495)	capslb (ENSSGRG00000014493)	lmbrd2b (ENSSGRG00000014458)	skp2 (ENSSGRG00000014416)	ENSSGRG00000014413	nadk2 (ENSSGRG00000014403)	MYO7A (ENSSGRG00000013354)	ompb (ENSSGRG00000013320)	CAPN5 (ENSSGRG00000012998)	CUL5 (ENSSGRG00000012989)	slc35f2 (ENSSGRG00000012984)	slc35f2 (ENSSGRG00000012983)
Goldfish	MODERN SPECIES	40	birc2 (ENSCARG00000033577)	ANGPTL5 (ENSCARG00000033481)	trpc6a (ENSCARG00000033339)	arhgap42a (ENSCARG00000033059)	fbxo40.1 (ENSCARG00000033011)	c1qa (ENSCARG00000032998)	c1qc (ENSCARG00000032989)	c1qb (ENSCARG00000032981)	bud13 (ENSCARG00000032974)	gig2f (ENSCARG00000032971)	gig2e (ENSCARG00000032964)	gig2l (ENSCARG00000032952)	gig2l (ENSCARG00000032941)	ENSCARG00000032930	nectin1a (ENSCARG00000032914)	ENSCARG00000032896 ##22	chek1 (ENSCARG00000032698)	cfap53 (ENSCARG00000032666)	myo5b (ENSCARG00000029808)	il7r (ENSCARG00000029729)	lmbrd2b (ENSCARG00000029545)	skp2 (ENSCARG00000029482)	nadk2 (ENSCARG00000029310)	ENSCARG00000029274	MYO7A (ENSCARG00000025821)	ompb (ENSCARG00000025699)	CAPN5 (ENSCARG00000024584)	CUL5 (ENSCARG00000038536)	slc35f2 (ENSCARG00000038502)	elmod1 (ENSCARG00000038454)	gria4b (ENSCARG00000038091)
Cyprininae	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a.g.b ##22
Goldfish	MODERN SPECIES	13	ENSCARG00000070110	guca1d (ENSCARG00000070112)	alg8 (ENSCARG00000070119)	pcf11 (ENSCARG00000070130)	ENSCARG00000070133	POLQ (ENSCARG00000070135)	birc2 (ENSCARG00000070148)	cfap300 (ENSCARG00000070153)	ANGPTL5 (ENSCARG00000070156)	trpc6a (ENSCARG00000070159)	arhgap42a (ENSCARG00000070194)	FBXO40 (ENSCARG00000070307)	gig2d (ENSCARG00000070308)	ENSCARG00000070309	nectin1a (ENSCARG00000070310)	ENSCARG00000070312 ##22	chek1 (ENSCARG00000070315)	myo5b (ENSCARG00000070339)	il7r (ENSCARG00000070416)	capslb (ENSCARG00000070418)	lmbrd2b (ENSCARG00000070420)	skp2 (ENSCARG00000070435)	nadk2 (ENSCARG00000070436)	MYO7A (ENSCARG00000070438)	CAPN5 (ENSCARG00000070441)	ompb (ENSCARG00000070442)	CUL5 (ENSCARG00000070443)	slc35f2 (ENSCARG00000070444)	elmod1 (ENSCARG00000070445)	gria4b (ENSCARG00000070450)	defbl2 (ENSCARG00000070461)
Cyprininae	ANCESTRAL SPECIES	84										ENSGT00940000155256.d.a.b.b	ENSGT00990000203527.a.a.a.e.a.h.a	ENSGT00990000203527.a.a.a.e.a.g.a	ENSGT00990000203527.a.a.a.f.n	ENSGT00940000155256.d.a.b.a	ENSGT00920000150761	ENSGT01100000263551.b.b.a.h ##22	ENSGT00990000203527.a.a.a.e.a.h.b	ENSGT00990000203527.a.a.a.e.a.g.b	ENSGT00990000203527.a.a.a.f.m	ENSGT00940000160467.f	ENSGT00940000160467.e	ENSGT00390000013999.f	ENSGT00940000160704.a.a.d	ENSGT00390000009936.m	ENSGT00940000167735.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.b	ENSGT00990000203527.a.a.b.d	ENSGT00940000161037	ENSGT00940000155168.a.a.a	ENSGT00990000203527.a.a.b.c.a.b	ENSGT00940000155168.a.a.b
Goldfish	MODERN SPECIES	3176															ENSCARG00000058718	ENSCARG00000058691 ##22
Cyprininae_a	ANCESTRAL SPECIES	254		ENSGT00940000156338.a.b	ENSGT00950000183056.A.a.c	ENSGT00530000067301.b	ENSGT00940000154835.C.eb.b.b.a	ENSGT00940000154835.C.eb.b.b.b.b	ENSGT00940000154835.C.eb.b.b.b.a.a	ENSGT00940000154835.C.eb.b.b.b.a.b	ENSGT00940000154835.C.eb.b.a.a	ENSGT00390000007879.f	ENSGT00940000158568.g	ENSGT00940000155256.d.a.b.a	ENSGT00920000150761	ENSGT00940000160704.a.a.d	ENSGT00390000009936.m	ENSGT01100000263551.b.b.a.h ##22	ENSGT00990000203527.a.a.a.e.a.h.b	ENSGT00990000203527.a.a.a.e.a.g.b	ENSGT00990000203527.a.a.a.f.m	ENSGT00940000160467.f.b	ENSGT00390000013999.e	ENSGT00940000160704.a.a.c.a.a	ENSGT00390000009936.n	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.a	ENSGT00990000203527.a.a.b.c.a.b	ENSGT00940000155168.a.a.b	ENSGT00940000165358	ENSGT00940000160242.a.b	ENSGT00940000154337.a.a.d	ENSGT00530000063528.A.b	ENSGT00390000008096.C.a.a.b
Golden-line barbel	MODERN SPECIES	1285								ENSSGRG00000052304	ENSSGRG00000052470	ENSSGRG00000052471	ENSSGRG00000052472	iglon5 (ENSSGRG00000052474)	ENSSGRG00000052476	ENSSGRG00000052482	etfb (ENSSGRG00000052488)	ENSSGRG00000052492 ##22	ENSSGRG00000052494	nr1d2a (ENSSGRG00000052495)	ube2e2 (ENSSGRG00000052496)
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	47	ENSCCRG00000059383	ENSCCRG00000023076	ENSCCRG00000023010	ENSCCRG00000040219	dhdds (ENSCCRG00000059005)	ago1 (ENSCCRG00000049594)	ENSCCRG00000068180	ENSCCRG00000056132	ENSCCRG00000027842	ENSCCRG00000077991	ENSCCRG00000078267	iglon5 (ENSCCRG00000058158)	ENSCCRG00000067412	ENSCCRG00000047505	etfb (ENSCCRG00000054593)	ENSCCRG00000054151 ##22	lim2.5 (ENSCCRG00000030486)	ENSCCRG00000072242	ENSCCRG00000045886	nr1d2a (ENSCCRG00000022043)	ube2e2 (ENSCCRG00000055274)	ENSCCRG00000058788	ENSCCRG00000027259	si:dkey-82o10.4 (ENSCCRG00000058795)	ENSCCRG00000082732	ENSCCRG00000073115	ENSCCRG00000075766	ENSCCRG00000063851	ENSCCRG00000030251	brd2b (ENSCCRG00000061806)	ENSCCRG00000049924
Common carp reference	MODERN SPECIES	2	ENSCCRG00000077116	fabp10a (ENSCCRG00000027595)	ENSCCRG00000064411	ENSCCRG00000041830	ENSCCRG00000038014	ENSCCRG00000075978	ENSCCRG00000010948	fam110d (ENSCCRG00000058623)	ENSCCRG00000078742	ENSCCRG00000032606	ENSCCRG00000051756	dhdds (ENSCCRG00000071418)	ago1 (ENSCCRG00000028791)	ENSCCRG00000062761	ENSCCRG00000057601	ENSCCRG00000076472 ##22	ENSCCRG00000027825	ENSCCRG00000082464	ENSCCRG00000065818	iglon5 (ENSCCRG00000027800)	ENSCCRG00000066960	ENSCCRG00000007377	ENSCCRG00000060590	etfb (ENSCCRG00000076871)	lim2.5 (ENSCCRG00000020849)	ENSCCRG00000055231	nr1d2a (ENSCCRG00000072521)	ube2e2 (ENSCCRG00000034670)	ENSCCRG00000027215	efhb (ENSCCRG00000027291)	rab5ab (ENSCCRG00000021082)
Euteleosteomorpha	ANCESTRAL SPECIES	13	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263535.b.a.a.a.b.b	ENSGT01100000263535.b.a.a.a.b.a	ENSGT01030000234968	ENSGT00990000203857
Acanthomorphata	ANCESTRAL SPECIES	38	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Cod	MODERN SPECIES	19	pigv (ENSGMOG00000001161)	zdhhc18a (ENSGMOG00000001179)	tent5ba (ENSGMOG00000019728)	RNF146 (ENSGMOG00000035264)	trmt11 (ENSGMOG00000006618)	ENSGMOG00000034923	hint3 (ENSGMOG00000006588)	eva1ba (ENSGMOG00000033967)	ENSGMOG00000006557	ENSGMOG00000035895	MAP7D1 (ENSGMOG00000024856)	ENSGMOG00000025369	dhdds (ENSGMOG00000001113)	ago1 (ENSGMOG00000019413)	ENSGMOG00000019418	ENSGMOG00000023507 ##22	ENSGMOG00000024736	iglon5 (ENSGMOG00000030867)	ENSGMOG00000031015	ENSGMOG00000023830	etfb (ENSGMOG00000009792)	ENSGMOG00000028407	ENSGMOG00000029166	ENSGMOG00000033659	ENSGMOG00000022940	ENSGMOG00000025532	xrcc1 (ENSGMOG00000012878)	ENSGMOG00000012888	ENSGMOG00000008695	ethe1 (ENSGMOG00000014903)	ENSGMOG00000034745
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Percomorphaceae	ANCESTRAL SPECIES		ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000204040	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879.g	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k
Bicolor damselfish	MODERN SPECIES	1237									SLC9A1 (ENSSPAG00000019277)	fam110d (ENSSPAG00000019264)	ENSSPAG00000019250	dhdds (ENSSPAG00000019216)	ago1 (ENSSPAG00000019154)	AGO3 (ENSSPAG00000019104)	ENSSPAG00000019089	ENSSPAG00000019072 ##22
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879.g	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT01100000263714
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000159312.a	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879.g	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Clown anemonefish	MODERN SPECIES	1307															ENSAOCG00000009386	ENSAOCG00000009395 ##22	ENSAOCG00000009405	ENSAOCG00000009413	iglon5 (ENSAOCG00000009423)	ENSAOCG00000002307	USF2 (ENSAOCG00000009479)	etfb (ENSAOCG00000009502)	ENSAOCG00000009515	lim2.5 (ENSAOCG00000009533)	ENSAOCG00000009550	ENSAOCG00000009559	ENSAOCG00000009579	ENSAOCG00000009589	xrcc1 (ENSAOCG00000009614)	drd2l (ENSAOCG00000009641)	ENSAOCG00000000597
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb	ENSGT01100000263535.b.a.b	ENSGT00990000203527.a.a.b.db	ENSGT01100000263571.i.a.a.k	ENSGT00990000204040	ENSGT01100000263573.a.a.a	ENSGT00940000173371
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb.a	ENSGT00990000203527.a.a.b.eb.b	ENSGT01100000263535.b.a.b	ENSGT00990000203527.a.a.b.db	ENSGT01100000263571.i.a.a.k.j.b	ENSGT01100000263571.i.a.a.k.j.a	ENSGT00990000204040
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb.a	ENSGT00990000203527.a.a.b.eb.b	ENSGT01100000263571.i.a.a.k.i.b	ENSGT00990000204040.b	ENSGT01100000263571.i.a.a.k.i.a	ENSGT01100000263573.a.a.a	ENSGT00940000173371
Lyretail cichlid	MODERN SPECIES	311	SLC9A1 (ENSNBRG00000010743)	fam110d (ENSNBRG00000010774)	ENSNBRG00000010789	ENSNBRG00000010807	dhdds (ENSNBRG00000010828)	ENSNBRG00000010852	ago1 (ENSNBRG00000010867)	ENSNBRG00000010923	ENSNBRG00000010936	ENSNBRG00000010973	ENSNBRG00000010979	iglon5 (ENSNBRG00000010998)	ENSNBRG00000011066	USF2 (ENSNBRG00000011092)	etfb (ENSNBRG00000011130)	ENSNBRG00000011157 ##22	lim2.5 (ENSNBRG00000011171)	ENSNBRG00000011191	ENSNBRG00000011217	ENSNBRG00000011264	ENSNBRG00000011284	xrcc1 (ENSNBRG00000011307)	drd2l (ENSNBRG00000011415)	ethe1 (ENSNBRG00000011439)	ENSNBRG00000011463	ENSNBRG00000011476	ENSNBRG00000011495	ENSNBRG00000011521	ENSNBRG00000011550	ENSNBRG00000011593	ENSNBRG00000011663
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb.a	ENSGT00990000203527.a.a.b.eb.b	ENSGT00990000203527.a.a.b.db	ENSGT01100000263571.i.a.a.k.j.b	ENSGT01100000263571.i.a.a.k.j.a	ENSGT00990000204040.a	ENSGT01100000263571.i.a.a.k.i.b
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb.a	ENSGT00990000203527.a.a.b.eb.b	ENSGT00990000203527.a.a.b.db	ENSGT01100000263571.i.a.a.k.j.a	ENSGT00990000204040.a	ENSGT01100000263571.i.a.a.k.j.b	ENSGT01100000263571.i.a.a.k.i.b
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a.c	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.eb.a	ENSGT00990000203527.a.a.b.eb.b	ENSGT00990000203527.a.a.b.db	ENSGT01100000263571.i.a.a.k.j.b	ENSGT01100000263571.i.a.a.k.j.a	ENSGT00990000204040.a	ENSGT00990000204040.b.a
Zebra mbuna	MODERN SPECIES	1093	cnr2 (ENSMZEG00005008219)	pnrc2 (ENSMZEG00005008200)	SRSF10 (ENSMZEG00005008188)	fabp10a (ENSMZEG00005008176)	MYOM3 (ENSMZEG00005008159)	ENSMZEG00005008150	MAN1C1 (ENSMZEG00005008120)	SLC9A1 (ENSMZEG00005008094)	fam110d (ENSMZEG00005008088)	ENSMZEG00005008083	ENSMZEG00005008077	ENSMZEG00005008067	dhdds (ENSMZEG00005008044)	ago1 (ENSMZEG00005007996)	AGO3 (ENSMZEG00005007949)	ENSMZEG00005007939 ##22	ENSMZEG00005007930	ENSMZEG00005007926	iglon5 (ENSMZEG00005007916)	ENSMZEG00005007905	USF2 (ENSMZEG00005007874)	etfb (ENSMZEG00005007854)	ENSMZEG00005007849	lim2.5 (ENSMZEG00005007837)	ENSMZEG00005007825	ENSMZEG00005007821	ENSMZEG00005007807	ENSMZEG00005007780	ENSMZEG00005007747	ENSMZEG00005007723	ENSMZEG00005007717
Eastern happy	MODERN SPECIES	2	cnr2 (ENSACLG00000000646)	pnrc2 (ENSACLG00000000649)	SRSF10 (ENSACLG00000000662)	fabp10a (ENSACLG00000000682)	MYOM3 (ENSACLG00000000694)	ENSACLG00000000734	MAN1C1 (ENSACLG00000000747)	SLC9A1 (ENSACLG00000000772)	fam110d (ENSACLG00000000805)	ENSACLG00000000810	ENSACLG00000000824	ENSACLG00000000835	dhdds (ENSACLG00000000847)	ago1 (ENSACLG00000000890)	AGO3 (ENSACLG00000000963)	ENSACLG00000001024 ##22	ENSACLG00000001066	ENSACLG00000001070	iglon5 (ENSACLG00000001090)	ENSACLG00000001124	USF2 (ENSACLG00000001142)	etfb (ENSACLG00000001187)	ENSACLG00000001220	lim2.5 (ENSACLG00000001242)	ENSACLG00000001265	ENSACLG00000001278	ENSACLG00000001379	ENSACLG00000001389	ENSACLG00000001408	ENSACLG00000001423	ENSACLG00000001442
Burton s mouthbrooder	MODERN SPECIES	340	pnrc2 (ENSHBUG00000010043)	SRSF10 (ENSHBUG00000010070)	fabp10a (ENSHBUG00000010092)	MYOM3 (ENSHBUG00000010165)	ENSHBUG00000010178	MAN1C1 (ENSHBUG00000010233)	SLC9A1 (ENSHBUG00000010287)	fam110d (ENSHBUG00000000958)	ENSHBUG00000010301	ENSHBUG00000010307	dhdds (ENSHBUG00000010364)	ago1 (ENSHBUG00000010459)	AGO3 (ENSHBUG00000010542)	ENSHBUG00000010554	ENSHBUG00000010563	ENSHBUG00000010568 ##22	FFAR2 (ENSHBUG00000010576)	ENSHBUG00000010597	iglon5 (ENSHBUG00000010607)	ENSHBUG00000010616	USF2 (ENSHBUG00000010672)	etfb (ENSHBUG00000010711)	ENSHBUG00000010716	lim2.5 (ENSHBUG00000000288)	ENSHBUG00000010743	ENSHBUG00000010772	ENSHBUG00000010782
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	2	ENSONIG00000028387	pnrc2 (ENSONIG00000021114)	SRSF10 (ENSONIG00000033510)	ENSONIG00000037154	fabp10a (ENSONIG00000016316)	MYOM3 (ENSONIG00000016317)	ENSONIG00000040246	MAN1C1 (ENSONIG00000016332)	ENSONIG00000030022	SLC9A1 (ENSONIG00000016334)	fam110d (ENSONIG00000029626)	ENSONIG00000039608	dhdds (ENSONIG00000016341)	ago1 (ENSONIG00000016345)	ENSONIG00000016349	ENSONIG00000016352 ##22	ENSONIG00000036205	ENSONIG00000042364	iglon5 (ENSONIG00000030761)	ENSONIG00000039512	USF2 (ENSONIG00000016360)	etfb (ENSONIG00000016366)	ENSONIG00000016371	lim2.5 (ENSONIG00000002401)	ENSONIG00000031650	ENSONIG00000016378	ENSONIG00000039434	ENSONIG00000037666	ENSONIG00000032134	ENSONIG00000028871	ENSONIG00000035280
Nile tilapia	MODERN SPECIES	1	srsf1b (ENSONIG00000004860)	ENSONIG00000035653	dynll2b (ENSONIG00000037057)	heatr6 (ENSONIG00000004863)	ddx52 (ENSONIG00000004869)	rpl23a (ENSONIG00000004876)	birc2 (ENSONIG00000004881)	ENSONIG00000004889	ANGPTL5 (ENSONIG00000004892)	ENSONIG00000004893	arhgap42a (ENSONIG00000004897)	snrnp35 (ENSONIG00000021361)	bud13 (ENSONIG00000004913)	ENSONIG00000004916	nectin1a (ENSONIG00000004917)	ENSONIG00000034663 ##22	ENSONIG00000004919	chek1 (ENSONIG00000004923)	ENSONIG00000004932	ENSONIG00000004937	alg9 (ENSONIG00000004938)	fdxacb1 (ENSONIG00000004939)	TOMM40L (ENSONIG00000004940)	bicdl2 (ENSONIG00000004943)	mia (ENSONIG00000027408)	cryaba (ENSONIG00000041517)	DIXDC1 (ENSONIG00000004949)	ENSONIG00000005409	dlat (ENSONIG00000004954)	zgc:165604 (ENSONIG00000027264)	PCNX3 (ENSONIG00000004962)
Atherinomorphae	ANCESTRAL SPECIES		ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00940000173371	ENSGT00390000004140.a
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000162314	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00940000173371
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000162314	ENSGT00940000175120	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b	ENSGT00940000159046.C.g
Turquoise killifish	MODERN SPECIES	1614	cnr2 (ENSNFUG00015020184)	PNRC2 (ENSNFUG00015020180)	FABP10A (ENSNFUG00015020177)	ENSNFUG00015020175	MYOM3 (ENSNFUG00015020150)	RRAGC (ENSNFUG00015020135)	MYCBP (ENSNFUG00015020131)	rhbdl2 (ENSNFUG00015020128)	AKIRIN1 (ENSNFUG00015020123)	MAN1C1 (ENSNFUG00015018064)	SLC9A1 (ENSNFUG00015016910)	FAM110D (ENSNFUG00015016856)	Nfu_g_1_011039 (ENSNFUG00015016848)	DHDDS (ENSNFUG00015016836)	ago1 (ENSNFUG00015013000)	ENSNFUG00015012817 ##22	ENSNFUG00015012809	iglon5 (ENSNFUG00015012794)	ENSNFUG00015012783	ENSNFUG00015012778	USF2 (ENSNFUG00015012746)	ETFB (ENSNFUG00015012726)	ENSNFUG00015012712	lim2.5 (ENSNFUG00015012694)	ENSNFUG00015012680	ENSNFUG00015012674	XRCC1 (ENSNFUG00015012664)	DRD2L (ENSNFUG00015012661)	ENSNFUG00015012656	ETHE1 (ENSNFUG00015012646)	ETHE1 (ENSNFUG00015012569)
Mangrove rivulus	MODERN SPECIES	73	rhbdl2 (ENSKMAG00000019086)	akirin1 (ENSKMAG00000019113)	cnr2 (ENSKMAG00000019129)	pnrc2 (ENSKMAG00000019136)	fabp10a (ENSKMAG00000019147)	MYOM3 (ENSKMAG00000019170)	ENSKMAG00000019229	MAN1C1 (ENSKMAG00000019259)	SLC9A1 (ENSKMAG00000019318)	fam110d (ENSKMAG00000019412)	ENSKMAG00000019417	dhdds (ENSKMAG00000019435)	ago1 (ENSKMAG00000019464)	AGO3 (ENSKMAG00000019534)	ENSKMAG00000019615	ENSKMAG00000019627 ##22	ENSKMAG00000019639	ENSKMAG00000019650	iglon5 (ENSKMAG00000019661)	ENSKMAG00000019671	USF2 (ENSKMAG00000019694)	etfb (ENSKMAG00000019725)	ENSKMAG00000019739	lim2.5 (ENSKMAG00000019755)	ENSKMAG00000019774	ENSKMAG00000019803	ENSKMAG00000019839	xrcc1 (ENSKMAG00000019854)	drd2l (ENSKMAG00000019882)	ENSKMAG00000019897	ethe1 (ENSKMAG00000019934)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467.d	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT00990000204040	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00390000004140.a
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467.d	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00990000203857.d.b	ENSGT00990000204040	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857.c	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES	17	SLC9A1 (ENSXMAG00000013257)	fam110d (ENSXMAG00000022768)	ENSXMAG00000029022	ENSXMAG00000023913	dhdds (ENSXMAG00000013272)	ago1 (ENSXMAG00000021899)	AGO3 (ENSXMAG00000007141)	ENSXMAG00000013297	ENSXMAG00000013298 ##22	ENSXMAG00000013299	ENSXMAG00000030070	iglon5 (ENSXMAG00000013303)	ENSXMAG00000026172	USF2 (ENSXMAG00000025613)	etfb (ENSXMAG00000027051)	ENSXMAG00000006510 ##22	lim2.5 (ENSXMAG00000006513)	ENSXMAG00000020212	ENSXMAG00000006519	ENSXMAG00000025756	ENSXMAG00000027576	ENSXMAG00000022889	xrcc1 (ENSXMAG00000006522)	ENSXMAG00000029061	drd2l (ENSXMAG00000006548)	ENSXMAG00000028092	ethe1 (ENSXMAG00000025910)	ethe1 (ENSXMAG00000024588)	ENSXMAG00000028201	ENSXMAG00000028783	si:dkey-24p1.1 (ENSXMAG00000006598)
Platyfish	MODERN SPECIES	17	akirin1 (ENSXMAG00000013230)	cnr2 (ENSXMAG00000013232)	pnrc2 (ENSXMAG00000019531)	fabp10a (ENSXMAG00000025668)	MYOM3 (ENSXMAG00000013239)	ENSXMAG00000013254	ENSXMAG00000013256	SLC9A1 (ENSXMAG00000013257)	fam110d (ENSXMAG00000022768)	ENSXMAG00000029022	ENSXMAG00000023913	dhdds (ENSXMAG00000013272)	ago1 (ENSXMAG00000021899)	AGO3 (ENSXMAG00000007141)	ENSXMAG00000013297	ENSXMAG00000013298 ##22	ENSXMAG00000013299	ENSXMAG00000030070	iglon5 (ENSXMAG00000013303)	ENSXMAG00000026172	USF2 (ENSXMAG00000025613)	etfb (ENSXMAG00000027051)	ENSXMAG00000006510 ##22	lim2.5 (ENSXMAG00000006513)	ENSXMAG00000020212	ENSXMAG00000006519	ENSXMAG00000025756	ENSXMAG00000027576	ENSXMAG00000022889	xrcc1 (ENSXMAG00000006522)	ENSXMAG00000029061
Poecilia	ANCESTRAL SPECIES		ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467.d	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.`b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857.d.b.b	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Guppy	MODERN SPECIES	446	akirin1 (ENSPREG00000006214)	cnr2 (ENSPREG00000006231)	pnrc2 (ENSPREG00000006242)	fabp10a (ENSPREG00000006252)	MYOM3 (ENSPREG00000006270)	ENSPREG00000006317	MAN1C1 (ENSPREG00000006346)	ENSPREG00000006367	SLC9A1 (ENSPREG00000006390)	fam110d (ENSPREG00000006437)	ENSPREG00000006452	dhdds (ENSPREG00000006477)	ago1 (ENSPREG00000006534)	AGO3 (ENSPREG00000006604)	ENSPREG00000006645	ENSPREG00000006661 ##22	ENSPREG00000006684	ENSPREG00000006689	iglon5 (ENSPREG00000006699)	ENSPREG00000006748	USF2 (ENSPREG00000006785)	etfb (ENSPREG00000006824)	lim2.5 (ENSPREG00000006844)	ENSPREG00000006857	ENSPREG00000006868	ENSPREG00000006877	cyp11c1 (ENSPREG00000006904)	pklr (ENSPREG00000006935)	ENSPREG00000006973	zbtb7b (ENSPREG00000006987)	NDUFV1 (ENSPREG00000007002)
NAME_6	ANCESTRAL SPECIES	69						ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467.d	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b.`b	ENSGT01100000263571.i.a.a.k.a.b	ENSGT00990000203857.c	ENSGT00990000203857.d.b.a.a	ENSGT00990000204040	ENSGT01100000263571.i.a.a.k.a.a	ENSGT00990000203857.d.b.b
Amazon molly	MODERN SPECIES	310								ENSPFOG00000022130	MAN1C1 (ENSPFOG00000006481)	SLC9A1 (ENSPFOG00000006211)	fam110d (ENSPFOG00000020320)	ENSPFOG00000023309	dhdds (ENSPFOG00000006134)	ago1 (ENSPFOG00000005867)	ENSPFOG00000005538	ENSPFOG00000024011 ##22	ENSPFOG00000005503	iglon5 (ENSPFOG00000005372)	ENSPFOG00000005338	USF2 (ENSPFOG00000005160)	etfb (ENSPFOG00000005104)	ENSPFOG00000005097	lim2.5 (ENSPFOG00000005053)	ENSPFOG00000020319	ENSPFOG00000005038	ENSPFOG00000024260	ENSPFOG00000004996	ENSPFOG00000005020	ENSPFOG00000023487	ENSPFOG00000024530	ENSPFOG00000004957
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	54					SLITRK3 (ENSPLAG00000006730)	ENSPLAG00000006745	ENSPLAG00000006781	ENSPLAG00000006856	ENSPLAG00000006867 ##22	ENSPLAG00000006873	ENSPLAG00000006885	iglon5 (ENSPLAG00000000147)	ENSPLAG00000006972	USF2 (ENSPLAG00000007016)	etfb (ENSPLAG00000007032)	ENSPLAG00000007036 ##22	lim2.5 (ENSPLAG00000007050)	ENSPLAG00000007061	ENSPLAG00000007072	ENSPLAG00000007077	ENSPLAG00000007089	ENSPLAG00000007104	ENSPLAG00000007118	xrcc1 (ENSPLAG00000007178)	drd2l (ENSPLAG00000007205)	ethe1 (ENSPLAG00000007257)	ENSPLAG00000007272	ENSPLAG00000007287	ENSPLAG00000007437	ENSPLAG00000007461	ENSPLAG00000007481
Sailfin molly	MODERN SPECIES	54												SLITRK3 (ENSPLAG00000006730)	ENSPLAG00000006745	ENSPLAG00000006781	ENSPLAG00000006856	ENSPLAG00000006867 ##22	ENSPLAG00000006873	ENSPLAG00000006885	iglon5 (ENSPLAG00000000147)	ENSPLAG00000006972	USF2 (ENSPLAG00000007016)	etfb (ENSPLAG00000007032)	ENSPLAG00000007036 ##22	lim2.5 (ENSPLAG00000007050)	ENSPLAG00000007061	ENSPLAG00000007072	ENSPLAG00000007077	ENSPLAG00000007089	ENSPLAG00000007104	ENSPLAG00000007118	xrcc1 (ENSPLAG00000007178)
NAME_4	ANCESTRAL SPECIES	55	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c.d	ENSGT00390000012224	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467.d	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b
Sheepshead minnow	MODERN SPECIES	178									ENSCVAG00000017968	SLC9A1 (ENSCVAG00000018047)	fam110d (ENSCVAG00000018055)	ENSCVAG00000018077	dhdds (ENSCVAG00000018112)	ago1 (ENSCVAG00000018173)	AGO3 (ENSCVAG00000018224)	ENSCVAG00000018244 ##22	ENSCVAG00000018263	iglon5 (ENSCVAG00000018268)	ENSCVAG00000018276	USF2 (ENSCVAG00000018362)	etfb (ENSCVAG00000018394)	ENSCVAG00000018412	ENSCVAG00000018429	lim2.5 (ENSCVAG00000018451)	ENSCVAG00000018475	ENSCVAG00000018504	ENSCVAG00000018524	ENSCVAG00000018538	apoa2 (ENSCVAG00000018548)	ENSCVAG00000018555	apoeb (ENSCVAG00000018559)
Mummichog	DUPLICATION
Mummichog	MODERN SPECIES	434														ENSFHEG00000021009	ENSFHEG00000020985	ENSFHEG00000020975 ##22	ENSFHEG00000020966	iglon5 (ENSFHEG00000020952)	ENSFHEG00000020789	USF2 (ENSFHEG00000020774)	etfb (ENSFHEG00000020683)	ENSFHEG00000020651	ENSFHEG00000020621
Mummichog	MODERN SPECIES	693	ENSFHEG00000017425	ENSFHEG00000017379	dynll2a (ENSFHEG00000017370)	heatr6 (ENSFHEG00000017349)	ddx52 (ENSFHEG00000017239)	rpl23a (ENSFHEG00000017230)	birc2 (ENSFHEG00000017219)	ENSFHEG00000017209	ANGPTL5 (ENSFHEG00000017197)	ENSFHEG00000017189	ENSFHEG00000017128	arhgap42a (ENSFHEG00000017118)	bud13 (ENSFHEG00000017085)	ENSFHEG00000017076	nectin1a (ENSFHEG00000017062)	ENSFHEG00000017055 ##22	ENSFHEG00000017039	ENSFHEG00000017022	ENSFHEG00000017000	ENSFHEG00000016919	ENSFHEG00000016687	alg9 (ENSFHEG00000016673)	TOMM40L (ENSFHEG00000016610)	fdxacb1 (ENSFHEG00000016602)	bicdl2 (ENSFHEG00000016595)	mia (ENSFHEG00000016588)	cryaba (ENSFHEG00000016579)	dlat (ENSFHEG00000016567)	zgc:165604 (ENSFHEG00000016528)	PCNX3 (ENSFHEG00000016485)	NRXN2 (ENSFHEG00000016312)
Oryzias	ANCESTRAL SPECIES	2	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b	ENSGT00940000159046.C.h
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00950000182802.A	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f.c	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000159046.C.h	ENSGT00940000169097
Japanese Medaka HdrR	MODERN SPECIES	7	pnrc2 (ENSORLG00000014784)	fabp10a (ENSORLG00000014794)	MYOM3 (ENSORLG00000014861)	ENSORLG00000027190	MAN1C1 (ENSORLG00000014871)	ENSORLG00000014904	fam110d (ENSORLG00000014917)	ENSORLG00000026460	ENSORLG00000030555	ENSORLG00000022990	dhdds (ENSORLG00000014943)	ago1 (ENSORLG00000014965)	AGO3 (ENSORLG00000015016)	ENSORLG00000029489 ##12	ENSORLG00000026442	ENSORLG00000022666 ##22	ENSORLG00000028442	iglon5 (ENSORLG00000015046)	ENSORLG00000026924	ENSORLG00000015114	etfb (ENSORLG00000015134)	ENSORLG00000022146	ENSORLG00000022225	lim2.5 (ENSORLG00000015140)	ENSORLG00000029166	ENSORLG00000015150	ENSORLG00000029558	ENSORLG00000030176	xrcc1 (ENSORLG00000015186)	drd2l (ENSORLG00000015196)	ethe1 (ENSORLG00000015211)
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c.d	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f.e	ENSGT00990000203527.a.a.a.f.f.b	ENSGT00990000203527.a.a.a.f.f.a	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000204040	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Javanese ricefish	MODERN SPECIES	7	MYCBP (ENSOJAG00000008501)	GJA9 (ENSOJAG00000008511)	rhbdl2 (ENSOJAG00000008540)	akirin1 (ENSOJAG00000008552)	cnr2 (ENSOJAG00000008565)	pnrc2 (ENSOJAG00000008605)	fabp10a (ENSOJAG00000008614)	MYOM3 (ENSOJAG00000008657)	ENSOJAG00000008813	MAN1C1 (ENSOJAG00000009025)	SLC9A1 (ENSOJAG00000011143)	fam110d (ENSOJAG00000011426)	ENSOJAG00000011434	dhdds (ENSOJAG00000011441)	ago1 (ENSOJAG00000011585)	ENSOJAG00000013869 ##22	ENSOJAG00000013875	ENSOJAG00000013897	ENSOJAG00000013957	iglon5 (ENSOJAG00000014001)	ENSOJAG00000014120	USF2 (ENSOJAG00000014141)	etfb (ENSOJAG00000014251)	lim2.5 (ENSOJAG00000014293)	ENSOJAG00000014329	ENSOJAG00000014343	ENSOJAG00000014397	ENSOJAG00000014415	ENSOJAG00000014451	ENSOJAG00000014481	ENSOJAG00000014511
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	5	cnr2 (ENSOMEG00000019931)	pnrc2 (ENSOMEG00000019937)	fabp10a (ENSOMEG00000019947)	MYOM3 (ENSOMEG00000020160)	ENSOMEG00000020259	MAN1C1 (ENSOMEG00000020338)	ENSOMEG00000020363	SLC9A1 (ENSOMEG00000000533)	fam110d (ENSOMEG00000020425)	C1orf232 (ENSOMEG00000020440)	dhdds (ENSOMEG00000020469)	ago1 (ENSOMEG00000020528)	ENSOMEG00000020543	AGO3 (ENSOMEG00000020588)	ENSOMEG00000000544	ENSOMEG00000020628 ##22	ENSOMEG00000020641	ENSOMEG00000020652	ENSOMEG00000020665	iglon5 (ENSOMEG00000020696)	ENSOMEG00000020726	USF2 (ENSOMEG00000020784)	etfb (ENSOMEG00000020819)	ENSOMEG00000020850	lim2.5 (ENSOMEG00000020872)	ENSOMEG00000020879	ENSOMEG00000020886	ENSOMEG00000020894	ENSOMEG00000020913	ENSOMEG00000020925	ENSOMEG00000020944
Indian medaka	MODERN SPECIES	4	ENSOMEG00000018646	tiprl (ENSOMEG00000018672)	ENSOMEG00000018695	rpl23a (ENSOMEG00000018730)	birc2 (ENSOMEG00000018766)	ENSOMEG00000018779	ENSOMEG00000018799	ANGPTL5 (ENSOMEG00000000489)	ENSOMEG00000018840	arhgap42a (ENSOMEG00000018877)	ENSOMEG00000018884	bud13 (ENSOMEG00000018921)	ENSOMEG00000018944	nectin1a (ENSOMEG00000019019)	ENSOMEG00000019045	ENSOMEG00000019057 ##22	ENSOMEG00000019087	ENSOMEG00000019100	ENSOMEG00000019146	ENSOMEG00000019189	ENSOMEG00000019236	ENSOMEG00000019274	alg9 (ENSOMEG00000019334)	fdxacb1 (ENSOMEG00000019353)	TOMM40L (ENSOMEG00000019403)	bicdl2 (ENSOMEG00000019474)	mia (ENSOMEG00000019494)	cryaba (ENSOMEG00000019508)	DIXDC1 (ENSOMEG00000019547)	dlat (ENSOMEG00000019613)	zgc:165604 (ENSOMEG00000019577)
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Tetraodontidae	ANCESTRAL SPECIES	49	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000175120	ENSGT01050000244814.a.a.b.b.b.a.a.d.a
Fugu	MODERN SPECIES	19	GJA9 (ENSTRUG00000033096)	rhbdl2 (ENSTRUG00000009100)	akirin1 (ENSTRUG00000024601)	cnr2 (ENSTRUG00000008915)	pnrc2 (ENSTRUG00000022856)	fabp10a (ENSTRUG00000019589)	MYOM3 (ENSTRUG00000007897)	ENSTRUG00000022282	MAN1C1 (ENSTRUG00000007812)	SLC9A1 (ENSTRUG00000007456)	fam110d (ENSTRUG00000007360)	ENSTRUG00000032374	dhdds (ENSTRUG00000007224)	ago1 (ENSTRUG00000024431)	AGO3 (ENSTRUG00000005992)	ENSTRUG00000024528 ##22	ENSTRUG00000002806	ENSTRUG00000022889	iglon5 (ENSTRUG00000005527)	ENSTRUG00000026975	lim2.5 (ENSTRUG00000028285)	ENSTRUG00000024392	USF2 (ENSTRUG00000005182)	etfb (ENSTRUG00000004992)	ENSTRUG00000004982	lim2.5 (ENSTRUG00000004856)	ENSTRUG00000024911	xrcc1 (ENSTRUG00000003163)	drd2l (ENSTRUG00000023690)	ENSTRUG00000029857	ENSTRUG00000021699
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Ballan wrasse	MODERN SPECIES	58	ENSLBEG00000008283	rhbdl2 (ENSLBEG00000008248)	akirin1 (ENSLBEG00000008199)	cnr2 (ENSLBEG00000008175)	pnrc2 (ENSLBEG00000008094)	fabp10a (ENSLBEG00000008069)	MYOM3 (ENSLBEG00000007996)	MAN1C1 (ENSLBEG00000007941)	SLC9A1 (ENSLBEG00000007890)	fam110d (ENSLBEG00000007862)	ENSLBEG00000007843	dhdds (ENSLBEG00000007766)	ago1 (ENSLBEG00000007694)	ENSLBEG00000007651	AGO3 (ENSLBEG00000007592)	ENSLBEG00000007546 ##22	ENSLBEG00000007520	ENSLBEG00000007502	iglon5 (ENSLBEG00000007476)	ENSLBEG00000007447	USF2 (ENSLBEG00000007416)	etfb (ENSLBEG00000007362)	ENSLBEG00000007332	lim2.5 (ENSLBEG00000007303)	ENSLBEG00000007273	ENSLBEG00000007248
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000015842	rhbdl2 (ENSCGOG00000015848)	akirin1 (ENSCGOG00000015860)	cnr2 (ENSCGOG00000015887)	SRSF10 (ENSCGOG00000015889)	pnrc2 (ENSCGOG00000015893)	fabp10a (ENSCGOG00000015896)	ENSCGOG00000015921	MAN1C1 (ENSCGOG00000015939)	SLC9A1 (ENSCGOG00000015971)	fam110d (ENSCGOG00000016776)	ENSCGOG00000016778	dhdds (ENSCGOG00000016787)	ago1 (ENSCGOG00000016961)	AGO3 (ENSCGOG00000018081)	ENSCGOG00000018317 ##22	ENSCGOG00000018319	ENSCGOG00000018320	iglon5 (ENSCGOG00000018321)	ENSCGOG00000018323	USF2 (ENSCGOG00000018340)	etfb (ENSCGOG00000018351)	ENSCGOG00000018367	lim2.5 (ENSCGOG00000018374)	ENSCGOG00000018377	ENSCGOG00000018379	ENSCGOG00000018383	ENSCGOG00000018384	xrcc1 (ENSCGOG00000018394)	drd2l (ENSCGOG00000018475)	ENSCGOG00000018480
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b	ENSGT00940000159046.C	ENSGT00940000160803
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES	7	ENSCLMG00005014263	cd79a (ENSCLMG00005014261)	arhgef1b (ENSCLMG00005014213)	ENSCLMG00005014193	ENSCLMG00005014188	trim35-28 (ENSCLMG00005014182)	CXCR3 (ENSCLMG00005014181)	cxcr3.3 (ENSCLMG00005014180)	cxcr3.2 (ENSCLMG00005014178)	cnfn (ENSCLMG00005014177)	tlr21 (ENSCLMG00005014176)	pafah1b3 (ENSCLMG00005014175)	ENSCLMG00005014171	ENSCLMG00005014169	ENSCLMG00005014167	ENSCLMG00005014164 ##22	ENSCLMG00005014161	ENSCLMG00005014160	GRIK5 (ENSCLMG00005014159)	znf574 (ENSCLMG00005014158)	gsk3ab (ENSCLMG00005013919)	ZNF526 (ENSCLMG00005013913)	ENSCLMG00005013884	ENSCLMG00005013881	POU2F2 (ENSCLMG00005013873)	dedd1 (ENSCLMG00005013872)	rabac1 (ENSCLMG00005013871)	ENSCLMG00005013870	ENSCLMG00005009247	ENSCLMG00005009233	ENSCLMG00005009232
Lumpfish	MODERN SPECIES	7	rhbdl2 (ENSCLMG00005009374)	akirin1 (ENSCLMG00005009427)	cnr2 (ENSCLMG00005009429)	pnrc2 (ENSCLMG00005009430)	ENSCLMG00005009431	fabp10a (ENSCLMG00005009432)	ENSCLMG00005009433	ENSCLMG00005009435	MAN1C1 (ENSCLMG00005009440)	SLC9A1 (ENSCLMG00005011688)	fam110d (ENSCLMG00005011690)	ENSCLMG00005011693	dhdds (ENSCLMG00005011696)	ago1 (ENSCLMG00005011699)	AGO3 (ENSCLMG00005011716)	ENSCLMG00005015638 ##22	ENSCLMG00005015639	ENSCLMG00005015640	iglon5 (ENSCLMG00005015644)	ENSCLMG00005015716	USF2 (ENSCLMG00005015718)	etfb (ENSCLMG00005015855)	lim2.5 (ENSCLMG00005015859)	ENSCLMG00005015868	ENSCLMG00005015869	ENSCLMG00005015871	xrcc1 (ENSCLMG00005015874)	drd2l (ENSCLMG00005015882)	ethe1 (ENSCLMG00005015885)	PHLDB3 (ENSCLMG00005015887)	ENSCLMG00005015888
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT00990000204040	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Gilthead seabream	MODERN SPECIES	8	akirin1 (ENSSAUG00010015045)	cnr2 (ENSSAUG00010015051)	pnrc2 (ENSSAUG00010015052)	SRSF10 (ENSSAUG00010015053)	fabp10a (ENSSAUG00010015055)	MYOM3 (ENSSAUG00010015059)	ENSSAUG00010015067	ENSSAUG00010015072	MAN1C1 (ENSSAUG00010015108)	SLC9A1 (ENSSAUG00010016682)	fam110d (ENSSAUG00010016753)	ENSSAUG00010016756	dhdds (ENSSAUG00010016758)	ago1 (ENSSAUG00010016787)	AGO3 (ENSSAUG00010021377)	ENSSAUG00010023501 ##22	ENSSAUG00010023503	ENSSAUG00010023505	iglon5 (ENSSAUG00010023507)	ENSSAUG00010023509	USF2 (ENSSAUG00010023510)	etfb (ENSSAUG00010023511)	ENSSAUG00010023513	lim2.5 (ENSSAUG00010023515)	ENSSAUG00010023516	ENSSAUG00010023519	ENSSAUG00010023521	ENSSAUG00010023522	ENSSAUG00010023524	ENSSAUG00010023525	ENSSAUG00010023526
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT01100000263714
European seabass	MODERN SPECIES	6	ENSDLAG00005029266	GJA9 (ENSDLAG00005007475)	rhbdl2 (ENSDLAG00005007466)	cnr2 (ENSDLAG00005033223)	SRSF10 (ENSDLAG00005029184)	ENSDLAG00005007393	pnrc2 (ENSDLAG00005027869)	ENSDLAG00005006972	ENSDLAG00005006955	ENSDLAG00005004513	ENSDLAG00005003710	fam110d (ENSDLAG00005032189)	ENSDLAG00005003662	dhdds (ENSDLAG00005003638)	ENSDLAG00005008347	ENSDLAG00005001598 ##22	ENSDLAG00005028939	ENSDLAG00005001573	iglon5 (ENSDLAG00005030305)	ENSDLAG00005001556	ENSDLAG00005001463	etfb (ENSDLAG00005001436)	ENSDLAG00005001429	lim2.5 (ENSDLAG00005018373)	ENSDLAG00005028166	ENSDLAG00005001395	ENSDLAG00005028121	ENSDLAG00005027602	ENSDLAG00005013296	ENSDLAG00005017765	ENSDLAG00005028136
Large yellow croaker	MODERN SPECIES	484	akirin1 (ENSLCRG00005014129)	cnr2 (ENSLCRG00005014118)	pnrc2 (ENSLCRG00005014109)	ENSLCRG00005014102	SRSF10 (ENSLCRG00005014090)	fabp10a (ENSLCRG00005014080)	MYOM3 (ENSLCRG00005014062)	ENSLCRG00005014038	ENSLCRG00005012674	SLC9A1 (ENSLCRG00005012056)	fam110d (ENSLCRG00005011945)	ENSLCRG00005011916	dhdds (ENSLCRG00005011906)	cbln17 (ENSLCRG00005011900)	ago1 (ENSLCRG00005010947)	ENSLCRG00005010858 ##22	ENSLCRG00005010851	ENSLCRG00005010847	iglon5 (ENSLCRG00005010835)	ENSLCRG00005010824	USF2 (ENSLCRG00005010794)	etfb (ENSLCRG00005010750)	lim2.5 (ENSLCRG00005010724)	ENSLCRG00005010715	ENSLCRG00005010712	ENSLCRG00005010711	ENSLCRG00005010705	ENSLCRG00005010688	ENSLCRG00005010661	ENSLCRG00005010620	ENSLCRG00005010606
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b
Carangaria	ANCESTRAL SPECIES	1	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Carangaria_A	ANCESTRAL SPECIES	27	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000162314	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00940000173371	ENSGT00390000004140.a.j
Seriola	ANCESTRAL SPECIES	48	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000163467.a.b.b.a.a.g.b	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT00390000012224	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000162314	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00940000172771	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT01100000263535.b.a.b	ENSGT00940000173371
Greater amberjack	MODERN SPECIES	154	akirin1 (ENSSDUG00000010616)	cnr2 (ENSSDUG00000010638)	pnrc2 (ENSSDUG00000010643)	SRSF10 (ENSSDUG00000010657)	fabp10a (ENSSDUG00000010668)	MYOM3 (ENSSDUG00000010685)	MAN1C1 (ENSSDUG00000010728)	ENSSDUG00000010756	SLC9A1 (ENSSDUG00000010768)	fam110d (ENSSDUG00000010816)	ENSSDUG00000010818	dhdds (ENSSDUG00000010830)	ago1 (ENSSDUG00000010864)	AGO3 (ENSSDUG00000010918)	ENSSDUG00000010946	ENSSDUG00000010960 ##22	ENSSDUG00000010970	ENSSDUG00000010974	iglon5 (ENSSDUG00000010986)	ENSSDUG00000010999	USF2 (ENSSDUG00000011027)	etfb (ENSSDUG00000011067)	ENSSDUG00000011095	lim2.5 (ENSSDUG00000011131)	ENSSDUG00000011143	ENSSDUG00000011154	ENSSDUG00000011200	ENSSDUG00000011219	ENSSDUG00000011222	ENSSDUG00000011241	xrcc1 (ENSSDUG00000011286)
Barramundi perch	MODERN SPECIES	104	ENSLCAG00010003436	GJA9 (ENSLCAG00010003430)	rhbdl2 (ENSLCAG00010003426)	akirin1 (ENSLCAG00010003420)	cnr2 (ENSLCAG00010003413)	pnrc2 (ENSLCAG00010003408)	SRSF10 (ENSLCAG00010003403)	MYOM3 (ENSLCAG00010003391)	ENSLCAG00010003384	MAN1C1 (ENSLCAG00010003314)	SLC9A1 (ENSLCAG00010003168)	fam110d (ENSLCAG00010003129)	ENSLCAG00010003126	dhdds (ENSLCAG00010003122)	ago1 (ENSLCAG00010002423)	ENSLCAG00010002233 ##22	ENSLCAG00010002230	ENSLCAG00010002228	iglon5 (ENSLCAG00010002226)	ENSLCAG00010002221	USF2 (ENSLCAG00010002215)	etfb (ENSLCAG00010002197)	ENSLCAG00010002182	lim2.5 (ENSLCAG00010002172)	ENSLCAG00010002168	ENSLCAG00010002164	ENSLCAG00010002161	xrcc1 (ENSLCAG00010002155)	drd2l (ENSLCAG00010002151)	ethe1 (ENSLCAG00010002139)	ENSLCAG00010002132
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c.d	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00390000013999.d.b	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000159046.C	ENSGT00940000169097	ENSGT01100000263571.i.a.a.l
Tongue sole	MODERN SPECIES	4	ENSCSEG00000001170	ENSCSEG00000001168	ENSCSEG00000001157	rpp25l (ENSCSEG00000001147)	ENSCSEG00000001144	ENSCSEG00000001140	COL6A6 (ENSCSEG00000001132)	ENSCSEG00000001127	PIK3R4 (ENSCSEG00000001108)	ATP2C1 (ENSCSEG00000001083)	dhdds (ENSCSEG00000001063)	ago1 (ENSCSEG00000001051)	ENSCSEG00000001048	AGO3 (ENSCSEG00000001040)	ENSCSEG00000000817	ENSCSEG00000000794 ##22	ENSCSEG00000000790	ENSCSEG00000000784	iglon5 (ENSCSEG00000000778)	ENSCSEG00000000769	USF2 (ENSCSEG00000000763)	etfb (ENSCSEG00000000755)	ENSCSEG00000000749	ISG20L2 (ENSCSEG00000000743)	mettl25b (ENSCSEG00000000735)	ENSCSEG00000000731	ENSCSEG00000000728	snrnp48 (ENSCSEG00000000722)	ENSCSEG00000000710	ENSCSEG00000000700	ENSCSEG00000000692
Turbot	MODERN SPECIES		ENSSMAG00000003287	GJA9 (ENSSMAG00000003266)	rhbdl2 (ENSSMAG00000003252)	akirin1 (ENSSMAG00000003202)	cnr2 (ENSSMAG00000003186)	pnrc2 (ENSSMAG00000003176)	SRSF10 (ENSSMAG00000003165)	ENSSMAG00000003146	MYOM3 (ENSSMAG00000003085)	ENSSMAG00000003004	ENSSMAG00000002938	ENSSMAG00000002923	dhdds (ENSSMAG00000002887)	ago1 (ENSSMAG00000002841)	ENSSMAG00000024070	ENSSMAG00000002751 ##22	ENSSMAG00000034597	iglon5 (ENSSMAG00000002739)	ENSSMAG00000029430	ENSSMAG00000005079	ENSSMAG00000036502	etfb (ENSSMAG00000005052)	ENSSMAG00000005028	lim2.5 (ENSSMAG00000004988)	ENSSMAG00000005009	ENSSMAG00000004958	xrcc1 (ENSSMAG00000004927)	drd2l (ENSSMAG00000004910)	ENSSMAG00000004899	ethe1 (ENSSMAG00000004866)	ENSSMAG00000004789
Anabantaria	ANCESTRAL SPECIES	2	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263535.b.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000008023	rhbdl2 (ENSMAMG00000026530)	akirin1 (ENSMAMG00000008054)	cnr2 (ENSMAMG00000008073)	pnrc2 (ENSMAMG00000008081)	ENSMAMG00000008111	ENSMAMG00000008128	MYOM3 (ENSMAMG00000008152)	ENSMAMG00000027427	ENSMAMG00000008187	ENSMAMG00000008260	fam110d (ENSMAMG00000008309)	ENSMAMG00000008315	dhdds (ENSMAMG00000008341)	ago1 (ENSMAMG00000024302)	ENSMAMG00000008506 ##22	ENSMAMG00000025514	ENSMAMG00000008524	iglon5 (ENSMAMG00000008537)	ENSMAMG00000008556	ENSMAMG00000008951	etfb (ENSMAMG00000008983)	lim2.5 (ENSMAMG00000009005)	ENSMAMG00000024572	ENSMAMG00000009030	ENSMAMG00000026105	ENSMAMG00000009049	ENSMAMG00000009058	xrcc1 (ENSMAMG00000009066)	ENSMAMG00000009077	ethe1 (ENSMAMG00000009123)
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00970000193644	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.d.b.a	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999.c	ENSGT00940000160704.a.a	ENSGT00390000009936	ENSGT00860000135013	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT00990000203527.a.a.b	ENSGT01100000263571.i.a.a.k	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a	ENSGT00940000155539.a.b	ENSGT00940000155418.b
Siamese fighting fish	MODERN SPECIES	7	akirin1 (ENSBSLG00000021034)	cnr2 (ENSBSLG00000021011)	pnrc2 (ENSBSLG00000020985)	SRSF10 (ENSBSLG00000020961)	MYOM3 (ENSBSLG00000020001)	ENSBSLG00000019981	ENSBSLG00000019975	MAN1C1 (ENSBSLG00000018945)	SLC9A1 (ENSBSLG00000018251)	fam110d (ENSBSLG00000018162)	ENSBSLG00000018066	ENSBSLG00000018057	dhdds (ENSBSLG00000018037)	ago1 (ENSBSLG00000014947)	ENSBSLG00000013451	ENSBSLG00000013178 ##22	ENSBSLG00000013127	ENSBSLG00000013112	iglon5 (ENSBSLG00000013090)	ENSBSLG00000012071	USF2 (ENSBSLG00000012002)	etfb (ENSBSLG00000021774)	ENSBSLG00000021756	lim2.5 (ENSBSLG00000021737)	ENSBSLG00000021722	ENSBSLG00000021700	ENSBSLG00000021631	ENSBSLG00000021621	xrcc1 (ENSBSLG00000021492)	ENSBSLG00000021464	ENSBSLG00000021454
Climbing perch	MODERN SPECIES	7	rhbdl2 (ENSATEG00000009166)	akirin1 (ENSATEG00000009163)	cnr2 (ENSATEG00000030122)	pnrc2 (ENSATEG00000009149)	ENSATEG00000026230	SRSF10 (ENSATEG00000009138)	fabp10a (ENSATEG00000008953)	MYOM3 (ENSATEG00000008871)	ENSATEG00000008856	ENSATEG00000008787	ENSATEG00000008646	fam110d (ENSATEG00000008638)	ENSATEG00000008629	dhdds (ENSATEG00000008591)	ago1 (ENSATEG00000008458)	ENSATEG00000008430 ##22	ENSATEG00000008424	ENSATEG00000008407	iglon5 (ENSATEG00000008365)	ENSATEG00000008325	ENSATEG00000008303	etfb (ENSATEG00000008276)	ENSATEG00000025646	lim2.5 (ENSATEG00000026826)	ENSATEG00000008237	ENSATEG00000008212	ENSATEG00000008183	ENSATEG00000008179	ENSATEG00000008169	ENSATEG00000008230	ENSATEG00000029149
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	7	MAN1C1 (ENSMMDG00005017869)	ENSMMDG00005018053	SLC9A1 (ENSMMDG00005018064)	fam110d (ENSMMDG00005019160)	ENSMMDG00005019164	dhdds (ENSMMDG00005019171)	ago1 (ENSMMDG00005019216)	AGO3 (ENSMMDG00005021149)	ENSMMDG00005022068 ##22	ENSMMDG00005022070	ENSMMDG00005022074	iglon5 (ENSMMDG00005022081)	ENSMMDG00005022145	USF2 (ENSMMDG00005022148)	etfb (ENSMMDG00005022157)	ENSMMDG00005022159 ##22	ENSMMDG00005022162	lim2.5 (ENSMMDG00005022163)	ENSMMDG00005022165	ENSMMDG00005022166	ENSMMDG00005022167	ENSMMDG00005022168	ENSMMDG00005022169	ENSMMDG00005022171	ENSMMDG00005022172	ENSMMDG00005022174	xrcc1 (ENSMMDG00005022176)	drd2l (ENSMMDG00005022182)	ethe1 (ENSMMDG00005022185)	ENSMMDG00005022187	ENSMMDG00005022190
Pinecone sodierfish	MODERN SPECIES	7	rhbdl2 (ENSMMDG00005017845)	akirin1 (ENSMMDG00005017848)	cnr2 (ENSMMDG00005017851)	pnrc2 (ENSMMDG00005017854)	SRSF10 (ENSMMDG00005017856)	fabp10a (ENSMMDG00005017859)	MYOM3 (ENSMMDG00005017860)	MAN1C1 (ENSMMDG00005017869)	ENSMMDG00005018053	SLC9A1 (ENSMMDG00005018064)	fam110d (ENSMMDG00005019160)	ENSMMDG00005019164	dhdds (ENSMMDG00005019171)	ago1 (ENSMMDG00005019216)	AGO3 (ENSMMDG00005021149)	ENSMMDG00005022068 ##22	ENSMMDG00005022070	ENSMMDG00005022074	iglon5 (ENSMMDG00005022081)	ENSMMDG00005022145	USF2 (ENSMMDG00005022148)	etfb (ENSMMDG00005022157)	ENSMMDG00005022159 ##22	ENSMMDG00005022162	lim2.5 (ENSMMDG00005022163)	ENSMMDG00005022165	ENSMMDG00005022166	ENSMMDG00005022167	ENSMMDG00005022168	ENSMMDG00005022169	ENSMMDG00005022171
Protacanthopterygii	ANCESTRAL SPECIES	12	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450.uc	ENSGT00940000160519.a.a	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256.c	ENSGT00950000182894.D.e	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.e.a	ENSGT00990000203527.a.a.a.f	ENSGT00940000177020	ENSGT00940000160467	ENSGT00390000013999	ENSGT00940000160704.a.a	ENSGT00390000009936.l	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e	ENSGT00990000203527.a.a.b	ENSGT00940000172771	ENSGT00990000203857	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a
Northern pike	MODERN SPECIES	19	drd2l (ENSELUG00000016363)	xrcc1 (ENSELUG00000016393)	ENSELUG00000016420	ENSELUG00000016406	ENSELUG00000031909	ENSELUG00000016446	lim2.5 (ENSELUG00000016465)	ENSELUG00000016501	etfb (ENSELUG00000016521)	USF2 (ENSELUG00000016557)	ENSELUG00000016576	iglon5 (ENSELUG00000016609)	ENSELUG00000016591	ENSELUG00000016627	ENSELUG00000016633	ENSELUG00000016640 ##22	ENSELUG00000016668	ENSELUG00000027642	ENSELUG00000025437	ENSELUG00000016684	ENSELUG00000016691	AGO3 (ENSELUG00000016755)	ago1 (ENSELUG00000016803)	dhdds (ENSELUG00000016834)	ENSELUG00000016881	fam110d (ENSELUG00000016888)	SLC9A1 (ENSELUG00000016952)	ENSELUG00000016996	ENSELUG00000017015	MYOM3 (ENSELUG00000017063)	fabp10a (ENSELUG00000017083)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	85	ENSGT00390000017974.nb.c	ENSGT01090000260070.C.a.d	ENSGT00940000159442.c	ENSGT00940000158787.g.a	ENSGT01060000248564.a.b.f	ENSGT00530000063881.a.b.s	ENSGT00940000154450.uc.d	ENSGT00940000164147.a.d	ENSGT00940000158669	ENSGT00940000174221.a	ENSGT00940000159312.c.b	ENSGT00940000156338.a.e	ENSGT00950000183056.A.a.e	ENSGT00390000007879.i.b	ENSGT00940000158568.r	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a
Huchen	MODERN SPECIES	1250										SLC9A1 (ENSHHUG00000022658)	fam110d (ENSHHUG00000022652)	dhdds (ENSHHUG00000022623)	ago1 (ENSHHUG00000022508)	ENSHHUG00000022259	TEKT2 (ENSHHUG00000022241)	ENSHHUG00000022238 ##22	ENSHHUG00000022237	ENSHHUG00000022234	iglon5 (ENSHHUG00000022225)
Salmoninae_a	ANCESTRAL SPECIES	93	ENSGT01090000260070.C.a.d	ENSGT00940000159442.c.b	ENSGT00940000158787.g.a	ENSGT01060000248564.a.b.f	ENSGT00530000063881.a.b.s	ENSGT00940000154450.uc.d	ENSGT00940000164147.a.d	ENSGT00940000158669	ENSGT00940000174221.a	ENSGT00940000159312.c.b	ENSGT00940000156338.a.e	ENSGT00950000183056.A.a.e	ENSGT00530000067301.d	ENSGT00390000007879.i.b	ENSGT00940000158568.r	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a	ENSGT00940000160704.a.a.f.b	ENSGT00390000009936.l.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.b	ENSGT00990000203527.a.a.b.hb.a	ENSGT00940000172771
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00940000159442.c.a	ENSGT00940000158787.g.b	ENSGT01060000248564.a.b.e	ENSGT00530000063881.a.b.t	ENSGT00940000154450.uc.c	ENSGT00940000164147.a.c	ENSGT00940000174221.b	ENSGT00940000159312.c.a	ENSGT00940000174221.a	ENSGT00940000159312.c.b	ENSGT00940000156338.a.f	ENSGT00950000183056.A.a.f	ENSGT00530000067301.c	ENSGT00390000007879.i.a	ENSGT00940000158568.r	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a	ENSGT00940000160704.a.a.f.b	ENSGT00390000009936.l.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.b	ENSGT00990000203527.a.a.b.hb.a	ENSGT00940000172771.a	ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.b	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k
Oncorhynchus_a	ANCESTRAL SPECIES	39	ENSGT00390000017974.nb.d	ENSGT01090000260070.C.a.c	ENSGT00940000159442.d	ENSGT00940000158787.g.b	ENSGT01060000248564.a.b.e	ENSGT00530000063881.a.b.t	ENSGT00940000154450.uc.c	ENSGT00940000164147.a.c	ENSGT00940000174221.b	ENSGT00940000159312.c.b.d	ENSGT00940000156338.a.f	ENSGT00950000183056.A.a.f	ENSGT00530000067301.c	ENSGT00390000007879.i.a	ENSGT00940000158568.r	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a	ENSGT00940000160704.a.a.f.b	ENSGT00390000009936.l.a	ENSGT01100000263535.b.a.b	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.b	ENSGT00990000203527.a.a.b.hb.a	ENSGT00940000172771.a	ENSGT00390000004140.a.h	ENSGT00940000155539.a.b.b.b	ENSGT00940000155418.b	ENSGT00940000159046.C.e
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	22	dnali1 (ENSOTSG00005007956)	gnl2 (ENSOTSG00005007955)	rspo1 (ENSOTSG00005007954)	FHL3 (ENSOTSG00005007953)	utp11 (ENSOTSG00005007952)	pou3f1 (ENSOTSG00005007951)	ENSOTSG00005007950	ENSOTSG00005006142	ENSOTSG00005006123	SLC9A1 (ENSOTSG00005006007)	fam110d (ENSOTSG00005006000)	ENSOTSG00005005997	dhdds (ENSOTSG00005005996)	ago1 (ENSOTSG00005005956)	ENSOTSG00005005840	ENSOTSG00005005833 ##22	ENSOTSG00005005831	ENSOTSG00005005829	ENSOTSG00005005820	iglon5 (ENSOTSG00005005816)	ENSOTSG00005005814	USF2 (ENSOTSG00005005811)	etfb (ENSOTSG00005005810)	ENSOTSG00005005809	lim2.5 (ENSOTSG00005005807)	ENSOTSG00005005806	ENSOTSG00005005805	xrcc1 (ENSOTSG00005005803)	drd2l (ENSOTSG00005005802)	ENSOTSG00005005801	ethe1 (ENSOTSG00005005800)
Chinook salmon	MODERN SPECIES	2914	rhbdl2 (ENSOTSG00005030317)	akirin1 (ENSOTSG00005030319)	cnr2 (ENSOTSG00005030388)	pnrc2 (ENSOTSG00005030390)	SRSF10 (ENSOTSG00005030392)	fabp10a (ENSOTSG00005030393)	MYOM3 (ENSOTSG00005030394)	ENSOTSG00005030395	ENSOTSG00005030402	ENSOTSG00005032545	SLC9A1 (ENSOTSG00005032547)	fam110d (ENSOTSG00005032813)	ENSOTSG00005032814	dhdds (ENSOTSG00005032815)	ENSOTSG00005032819	ENSOTSG00005032905 ##22	ENSOTSG00005032908	ENSOTSG00005032909	ENSOTSG00005032910	ENSOTSG00005032912	iglon5 (ENSOTSG00005032914)	ENSOTSG00005032915	ENSOTSG00005032917	USF2 (ENSOTSG00005021769)	etfb (ENSOTSG00005021771)	ENSOTSG00005021772	lim2.5 (ENSOTSG00005021774)	ENSOTSG00005021775	ENSOTSG00005021776	xrcc1 (ENSOTSG00005021778)	drd2l (ENSOTSG00005021827)
Coho salmon	MODERN SPECIES	11	GJA9 (ENSOKIG00005017806)	rhbdl2 (ENSOKIG00005017791)	akirin1 (ENSOKIG00005017768)	cnr2 (ENSOKIG00005017757)	pnrc2 (ENSOKIG00005017753)	SRSF10 (ENSOKIG00005017742)	ENSOKIG00005017736	MYOM3 (ENSOKIG00005017707)	ENSOKIG00005014569	SLC9A1 (ENSOKIG00005014290)	fam110d (ENSOKIG00005014276)	ENSOKIG00005014263	dhdds (ENSOKIG00005014254)	ENSOKIG00005014246	ago1 (ENSOKIG00005013932)	ENSOKIG00005013911 ##22	ENSOKIG00005013907	ENSOKIG00005013904	ENSOKIG00005013895	iglon5 (ENSOKIG00005013879)	ENSOKIG00005013864	USF2 (ENSOKIG00005039664)	etfb (ENSOKIG00005039565)	ENSOKIG00005039538	lim2.5 (ENSOKIG00005039498)	ENSOKIG00005039480	ENSOKIG00005039412	xrcc1 (ENSOKIG00005039375)	drd2l (ENSOKIG00005039326)	ethe1 (ENSOKIG00005039298)	ENSOKIG00005039283
Rainbow trout	MODERN SPECIES	21	akirin1 (ENSOMYG00000009097)	cnr2 (ENSOMYG00000009045)	pnrc2 (ENSOMYG00000009031)	SRSF10 (ENSOMYG00000009019)	ENSOMYG00000056498	ENSOMYG00000069103	ENSOMYG00000008956	ENSOMYG00000066237	ENSOMYG00000008834	ENSOMYG00000008256	fam110d (ENSOMYG00000007678)	ENSOMYG00000067432	ENSOMYG00000069902	dhdds (ENSOMYG00000007637)	ago1 (ENSOMYG00000006740)	ENSOMYG00000050269 ##22	ENSOMYG00000005604	ENSOMYG00000070614	ENSOMYG00000005573	ENSOMYG00000064445	iglon5 (ENSOMYG00000005534)	ENSOMYG00000053949	ENSOMYG00000005355	ENSOMYG00000005295	ENSOMYG00000005208	etfb (ENSOMYG00000005072)	lim2.5 (ENSOMYG00000005013)	ENSOMYG00000004986	ENSOMYG00000004954	ENSOMYG00000061484	ENSOMYG00000065052
Salmo	ANCESTRAL SPECIES	32	ENSGT00940000158787.g.a	ENSGT01060000248564.a.b.f	ENSGT00530000063881.a.b.s	ENSGT00940000154450.uc.d	ENSGT00940000164147.a.d	ENSGT00940000158669	ENSGT00940000174221.a	ENSGT00940000159312.c.b	ENSGT00940000156338.a.e	ENSGT00950000183056.A.a.e	ENSGT00530000067301.c	ENSGT00390000007879.i.b	ENSGT00940000158568.q.a	ENSGT00940000155256.c.b	ENSGT00950000182894.D.e.a.b	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a	ENSGT00940000160704.a.a.f.b	ENSGT00390000009936.l.a	ENSGT01100000263535.b.a.b	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.b	ENSGT00990000203527.a.a.b.hb.a	ENSGT00940000172771	ENSGT00390000004140.a.h	ENSGT00940000155539.a.b.b.b	ENSGT00940000155418.b	ENSGT00940000159046.C.e
River trout	MODERN SPECIES	30	rhbdl2 (ENSSTUG00000043631)	akirin1 (ENSSTUG00000043595)	cnr2 (ENSSTUG00000043585)	pnrc2 (ENSSTUG00000043579)	SRSF10 (ENSSTUG00000043556)	fabp10a (ENSSTUG00000043538)	MYOM3 (ENSSTUG00000043487)	ENSSTUG00000043465	MAN1C1 (ENSSTUG00000041254)	SLC9A1 (ENSSTUG00000040715)	fam110d (ENSSTUG00000040671)	ENSSTUG00000040653	dhdds (ENSSTUG00000040595)	ago1 (ENSSTUG00000039351)	TEKT2 (ENSSTUG00000039246)	ENSSTUG00000039239 ##22	ENSSTUG00000039232	ENSSTUG00000039225	ENSSTUG00000039213	iglon5 (ENSSTUG00000039149)	ENSSTUG00000039138	USF2 (ENSSTUG00000039081)	etfb (ENSSTUG00000039063)	ENSSTUG00000039044	ENSSTUG00000039041	lim2.5 (ENSSTUG00000039027)	ENSSTUG00000039025	ENSSTUG00000039001	ENSSTUG00000038992	xrcc1 (ENSSTUG00000038981)	drd2l (ENSSTUG00000038967)
Atlantic salmon	MODERN SPECIES	11	cnr2 (ENSSSAG00000042370)	SRSF10 (ENSSSAG00000092388)	ENSSSAG00000074665	ENSSSAG00000100653	MYOM3 (ENSSSAG00000074654)	ENSSSAG00000074644	ENSSSAG00000073815	ENSSSAG00000073484	fam110d (ENSSSAG00000100371)	ENSSSAG00000090831	ENSSSAG00000085618	dhdds (ENSSSAG00000073446)	ago1 (ENSSSAG00000068383)	ENSSSAG00000059265	TEKT2 (ENSSSAG00000116845)	ENSSSAG00000068219 ##22	ENSSSAG00000068216	ENSSSAG00000085435	ENSSSAG00000105381	iglon5 (ENSSSAG00000052982)	ENSSSAG00000068197	ENSSSAG00000068171	etfb (ENSSSAG00000068157)	ENSSSAG00000068154	ENSSSAG00000068149	ENSSSAG00000068143	ENSSSAG00000114122	xrcc1 (ENSSSAG00000068124)	drd2l (ENSSSAG00000068118)	ENSSSAG00000111027	ETHE1 (ENSSSAG00000068115)
Salmoninae	ANCESTRAL SPECIES	154							ENSGT00940000174221.b	ENSGT00940000159312.c.a	ENSGT00940000156338.a.f	ENSGT00950000183056.A.a.f	ENSGT00530000067301	ENSGT00390000007879.i.a	ENSGT00940000158568.q.b	ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.a.a	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k	ENSGT00940000160467.a.a	ENSGT00390000013999.a.b	ENSGT00940000160704.a.a.f	ENSGT00390000009936.l.b	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.a	ENSGT00990000203527.a.a.b.hb.b	ENSGT00990000203527.a.a.b.ib	ENSGT01100000263571.i.a.a.n	ENSGT01100000263573.a.a.a	ENSGT00940000173371	ENSGT00390000004140.a.g	ENSGT00940000159046.C.f
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT00940000159442.d	ENSGT00940000158787.g.b	ENSGT01060000248564.a.b.e	ENSGT00530000063881.a.b.t	ENSGT00940000154450.uc.c	ENSGT00940000164147.a.c	ENSGT00940000174221.b	ENSGT00940000159312.c.a	ENSGT00940000156338.a.f	ENSGT00950000183056.A.a.f	ENSGT00530000067301.c	ENSGT00390000007879.i.a	ENSGT00940000158568.q.b	ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.a.a	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k	ENSGT00940000160467.a.a	ENSGT00390000013999.a.a.b	ENSGT00390000013999.a.b	ENSGT00940000160704.a.a.f.a	ENSGT00940000160704.a.a.e	ENSGT00390000009936.l.b	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.a	ENSGT00990000203527.a.a.b.hb.b	ENSGT00990000203527.a.a.b.ib	ENSGT01100000263571.i.a.a.n	ENSGT01100000263573.a.a.a	ENSGT00940000173371
Salmo	ANCESTRAL SPECIES	1	ENSGT00940000158787.g.b	ENSGT01060000248564.a.b.e	ENSGT00530000063881.a.b.t	ENSGT00940000154450.uc.c	ENSGT00940000164147.a.c	ENSGT00940000174221.b	ENSGT00940000159312.c.a	ENSGT00940000156338.a.f	ENSGT00950000183056.A.a.f	ENSGT00530000067301.d	ENSGT00990000214076	ENSGT00390000007879.i.a	ENSGT00940000158568.q.b	ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.a.a	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k	ENSGT00940000160467.a.a	ENSGT00390000013999.a.a.b	ENSGT00390000013999.a.b	ENSGT00940000160704.a.a.f.a	ENSGT00940000160704.a.a.e	ENSGT00390000009936.l.b	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.a	ENSGT00990000203527.a.a.b.ib	ENSGT01100000263571.i.a.a.n	ENSGT01100000263573.a.a.a	ENSGT00390000004140.a.g	ENSGT00940000159046.C.f
Atlantic salmon	MODERN SPECIES	24	ca108 (ENSSSAG00000042312)	ENSSSAG00000084598	cnr2 (ENSSSAG00000027960)	pnrc2 (ENSSSAG00000100053)	ENSSSAG00000092893	ENSSSAG00000042403	ENSSSAG00000042479	ENSSSAG00000045322	fam110d (ENSSSAG00000081954)	ENSSSAG00000091082	ENSSSAG00000046934	dhdds (ENSSSAG00000046939)	ago1 (ENSSSAG00000095889)	ENSSSAG00000069239	TEKT2 (ENSSSAG00000052914)	ENSSSAG00000052935 ##22	ENSSSAG00000052945	ENSSSAG00000102044	iglon5 (ENSSSAG00000068202)	ENSSSAG00000053036	hamp (ENSSSAG00000053028)	ENSSSAG00000109721	etfb (ENSSSAG00000053142)	ENSSSAG00000053159	lim2.5 (ENSSSAG00000101146)	ENSSSAG00000062345	ENSSSAG00000093514	ENSSSAG00000084942	ENSSSAG00000053209	ENSSSAG00000053228	XRCC1 (ENSSSAG00000053271)
River trout	MODERN SPECIES	22	rhbdl2 (ENSSTUG00000029559)	akirin1 (ENSSTUG00000029596)	cnr2 (ENSSTUG00000029643)	pnrc2 (ENSSTUG00000029646)	SRSF10 (ENSSTUG00000029650)	fabp10a (ENSSTUG00000029664)	ENSSTUG00000029667	ENSSTUG00000029747	SLC9A1 (ENSSTUG00000031777)	fam110d (ENSSTUG00000032690)	ENSSTUG00000032693	ENSSTUG00000032696	dhdds (ENSSTUG00000032713)	ENSSTUG00000032836	ENSSTUG00000035052	ENSSTUG00000035090 ##22	ENSSTUG00000035100	ENSSTUG00000035103	iglon5 (ENSSTUG00000035115)	ENSSTUG00000035169	ENSSTUG00000035176	USF2 (ENSSTUG00000035191)	etfb (ENSSTUG00000035224)	ENSSTUG00000035242	lim2.5 (ENSSTUG00000035263)	ENSSTUG00000035275	ENSSTUG00000035286	ENSSTUG00000035313	xrcc1 (ENSSTUG00000035318)	drd2l (ENSSTUG00000035364)	ENSSTUG00000035378
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00390000007879.i.a	ENSGT00940000158568.r	ENSGT01100000263551.b.b.a.w.a ##22	ENSGT00990000203527.a.a.a.e.a.j	ENSGT00990000203527.a.a.a.f.l	ENSGT00940000177020	ENSGT00940000160467.a.b	ENSGT00390000013999.a.a.a	ENSGT00940000160704.a.a.f.b	ENSGT00390000009936.l.a	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.b	ENSGT00990000203527.a.a.b.hb.a	ENSGT00940000172771.a	ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.b	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k	ENSGT00940000160467.a.a	ENSGT00390000013999.a.a.b	ENSGT00390000013999.a.b	ENSGT00940000160704.a.a.f.a	ENSGT00390000013999.b	ENSGT00940000160704.a.a.e	ENSGT00390000009936.l.b	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.a	ENSGT00990000203527.a.a.b.hb.b	ENSGT00990000203527.a.a.b.ib	ENSGT01100000263571.i.a.a.n	ENSGT01100000263573.a.a.a
Rainbow trout	MODERN SPECIES	11	akirin1 (ENSOMYG00000036028)	cnr2 (ENSOMYG00000036009)	pnrc2 (ENSOMYG00000036006)	SRSF10 (ENSOMYG00000036002)	ENSOMYG00000035997	ENSOMYG00000035968	ENSOMYG00000035948	ENSOMYG00000071280	ENSOMYG00000035936	fam110d (ENSOMYG00000035924)	ENSOMYG00000056526	dhdds (ENSOMYG00000035914)	ENSOMYG00000065643	ago1 (ENSOMYG00000031185)	ENSOMYG00000030558	ENSOMYG00000030526 ##22	ENSOMYG00000030500	ENSOMYG00000030493	ENSOMYG00000077016	iglon5 (ENSOMYG00000030476)	ENSOMYG00000048117	ENSOMYG00000074079	ENSOMYG00000030455	ENSOMYG00000030443	ENSOMYG00000030424	etfb (ENSOMYG00000030373)	ENSOMYG00000030341	lim2.5 (ENSOMYG00000030329)	ENSOMYG00000030315	ENSOMYG00000076068	ENSOMYG00000030302
Oncorhynchus_a	ANCESTRAL SPECIES	26														ENSGT00940000155256.c.a	ENSGT00950000182894.D.e.b	ENSGT01100000263551.b.b.a.w.b ##22	ENSGT00990000203527.a.a.a.e.a.i	ENSGT00990000203527.a.a.a.f.k	ENSGT00940000160467.a.a	ENSGT00390000013999.a.a.b	ENSGT00390000013999.a.b	ENSGT00940000160704.a.a.f.a	ENSGT00940000160704.a.a.e	ENSGT00390000009936.l.b	ENSGT00940000167735	ENSGT01050000244814.a.a.b.b.b.a.a.d.a.e.a	ENSGT00990000203527.a.a.b.hb.b	ENSGT00990000203527.a.a.b.ib	ENSGT01100000263571.i.a.a.n	ENSGT01100000263573.a.a.a	ENSGT00940000173371.b
Coho salmon	MODERN SPECIES	4	ENSOKIG00005013247	GJA9 (ENSOKIG00005013255)	rhbdl2 (ENSOKIG00005013262)	akirin1 (ENSOKIG00005013285)	cnr2 (ENSOKIG00005013302)	pnrc2 (ENSOKIG00005013307)	SRSF10 (ENSOKIG00005013317)	ENSOKIG00005013329	ENSOKIG00005013360	SLC9A1 (ENSOKIG00005013635)	fam110d (ENSOKIG00005014553)	ENSOKIG00005014558	dhdds (ENSOKIG00005014570)	ENSOKIG00005014653	TEKT2 (ENSOKIG00005015202)	ENSOKIG00005015263 ##22	ENSOKIG00005015271	ENSOKIG00005015279	iglon5 (ENSOKIG00005015297)	ENSOKIG00005015350	USF2 (ENSOKIG00005015371)	etfb (ENSOKIG00005015459)	ENSOKIG00005015491	lim2.5 (ENSOKIG00005015516)	ENSOKIG00005015536	ENSOKIG00005015539	ENSOKIG00005015547	ENSOKIG00005015571	ENSOKIG00005015611	xrcc1 (ENSOKIG00005016878)	drd2l (ENSOKIG00005016918)
Chinook salmon	MODERN SPECIES	15	rhbdl2 (ENSOTSG00005023724)	akirin1 (ENSOTSG00005023721)	cnr2 (ENSOTSG00005023719)	pnrc2 (ENSOTSG00005023718)	SRSF10 (ENSOTSG00005023716)	fabp10a (ENSOTSG00005023714)	ENSOTSG00005023711	ENSOTSG00005023687	SLC9A1 (ENSOTSG00005023218)	fam110d (ENSOTSG00005023212)	ENSOTSG00005023211	ENSOTSG00005023210	dhdds (ENSOTSG00005023209)	ago1 (ENSOTSG00005021600)	TEKT2 (ENSOTSG00005021579)	ENSOTSG00005021575 ##22	ENSOTSG00005021569	ENSOTSG00005021566	iglon5 (ENSOTSG00005021564)	ENSOTSG00005021560	ENSOTSG00005021558	USF2 (ENSOTSG00005021429)	etfb (ENSOTSG00005021422)	ENSOTSG00005021421	lim2.5 (ENSOTSG00005021417)	ENSOTSG00005021415	ENSOTSG00005021411	ENSOTSG00005021406	ENSOTSG00005021402	ENSOTSG00005021395	ENSOTSG00005021387
Huchen	MODERN SPECIES	299									ENSHHUG00000015585	SLC9A1 (ENSHHUG00000015295)	fam110d (ENSHHUG00000015265)	ENSHHUG00000015255	dhdds (ENSHHUG00000015239)	ago1 (ENSHHUG00000015104)	ENSHHUG00000014485	ENSHHUG00000014423 ##22	ENSHHUG00000014406	ENSHHUG00000014403	iglon5 (ENSHHUG00000014259)	ENSHHUG00000014240	USF2 (ENSHHUG00000014210)	etfb (ENSHHUG00000014085)	ENSHHUG00000014072	lim2.5 (ENSHHUG00000014066)	ENSHHUG00000014051	ENSHHUG00000014048	ENSHHUG00000014017	ENSHHUG00000014003	xrcc1 (ENSHHUG00000013992)	drd2l (ENSHHUG00000013958)	ethe1 (ENSHHUG00000013947)
Salmoninae	ANCESTRAL SPECIES	1892																ENSGT01100000263551.b.b.a.x ##22	ENSGT00940000163088
Salmoninae_a	ANCESTRAL SPECIES	788																ENSGT01100000263551.b.b.a.x ##22	ENSGT00940000163088
Oncorhynchus	ANCESTRAL SPECIES	659																ENSGT01100000263551.b.b.a.x ##22	ENSGT00940000163088
Oncorhynchus_a	ANCESTRAL SPECIES	793																ENSGT01100000263551.b.b.a.x ##22	ENSGT00940000163088
Coho salmon	MODERN SPECIES	21	bud13 (ENSOKIG00005028485)	btg4 (ENSOKIG00005028510)	ENSOKIG00005028518	ENSOKIG00005028529	hspb2 (ENSOKIG00005028541)	bicdl2 (ENSOKIG00005028553)	ENSOKIG00005028566	TOMM40L (ENSOKIG00005028582)	ENSOKIG00005028655	ENSOKIG00005028675	DLAT (ENSOKIG00005028728)	ENSOKIG00005029069	chek1 (ENSOKIG00005029079)	ENSOKIG00005029210	ENSOKIG00005029218	ENSOKIG00005029237 ##22	ENSOKIG00005029247	sod1 (ENSOKIG00005029302)	ENSOKIG00005029350	ENSOKIG00005029363	ENSOKIG00005029376	synj1 (ENSOKIG00005029425)	ENSOKIG00005029867	ENSOKIG00005029876	ENSOKIG00005029889	ENSOKIG00005029909	GRIK1 (ENSOKIG00005030196)	ENSOKIG00005030319	cct8 (ENSOKIG00005030339)	ENSOKIG00005030526	CADM2 (ENSOKIG00005030539)
Osteoglossiformes	ANCESTRAL SPECIES	101	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00940000154450	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000161366	ENSGT00940000159312	ENSGT00940000156338.a	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00390000007879	ENSGT00940000158568	ENSGT00940000155256	ENSGT00920000150761	ENSGT01100000263551.b.b.a ##22	ENSGT00990000203527.a.a.a.f	ENSGT00940000160467	ENSGT00940000179505	ENSGT00940000160704.a.a.b	ENSGT00390000009936
P. kingsleyae	MODERN SPECIES	135	fabp10a (ENSPKIG00000000593)	ENSPKIG00000000580	MYOM3 (ENSPKIG00000000489)	ENSPKIG00000000450	MAN1C1 (ENSPKIG00000000394)	SLC9A1 (ENSPKIG00000000323)	fam110d (ENSPKIG00000000300)	ENSPKIG00000000292	ENSPKIG00000000274	dhdds (ENSPKIG00000000236)	ENSPKIG00000000188	ENSPKIG00000000164	ENSPKIG00000000154	AGO3 (ENSPKIG00000000146)	ENSPKIG00000000132	ENSPKIG00000000113 ##22	ENSPKIG00000000104	ENSPKIG00000000095	iglon5 (ENSPKIG00000000081)	ENSPKIG00000000073	USF2 (ENSPKIG00000000057)	etfb (ENSPKIG00000000040)	ENSPKIG00000000033	ENSPKIG00000000025	rrp15 (ENSPKIG00000000018)	wdr26b (ENSPKIG00000000004)	CNIH4 (ENSPKIG00000025684)	vegfaa (ENSPKIG00000025613)	kpna5 (ENSPKIG00000025689)	zufsp (ENSPKIG00000025593)	ENSPKIG00000025625
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	9	akirin1 (ENSSFOG00015020545)	cnr2 (ENSSFOG00015020558)	pnrc2 (ENSSFOG00015020565)	srsf10b (ENSSFOG00015020577)	fabp10a (ENSSFOG00015033162)	MYOM3 (ENSSFOG00015020617)	ENSSFOG00015020693	ENSSFOG00015020703	MAN1C1 (ENSSFOG00015020717)	SLC9A1 (ENSSFOG00015020791)	ENSSFOG00015032526	fam110d (ENSSFOG00015032808)	ENSSFOG00015020929	dhdds (ENSSFOG00015020950)	ago1 (ENSSFOG00015020982)	ENSSFOG00015000286 ##22	FFAR3 (ENSSFOG00015030987)	iglon5 (ENSSFOG00015000317)	ENSSFOG00015024379	USF2 (ENSSFOG00015000359)	etfb (ENSSFOG00015000420)	ENSSFOG00015024736	ENSSFOG00015025742	ENSSFOG00015026509	ENSSFOG00015032792
Asian bonytongue	MODERN SPECIES	18	fbxo40.1 (ENSSFOG00015032157)	c1qa (ENSSFOG00015005774)	c1qc (ENSSFOG00015005781)	C1QB (ENSSFOG00015029863)	ttc36 (ENSSFOG00015033309)	bud13 (ENSSFOG00015005820)	ENSSFOG00015005862	ENSSFOG00015029249	ENSSFOG00015005876	ENSSFOG00015031612	ENSSFOG00015005912	ENSSFOG00015033103	nectin1a (ENSSFOG00015005955)	ENSSFOG00015005998	ENSSFOG00015029158	ENSSFOG00015006185 ##22	cdon (ENSSFOG00015006205)	chek1 (ENSSFOG00015006236)	aplp2 (ENSSFOG00015006295)	nfrkb (ENSSFOG00015006360)	tmem45b (ENSSFOG00015006674)	gng8 (ENSSFOG00015006697)	sycn.2 (ENSSFOG00015006712)	ENSSFOG00015028442	EHD2 (ENSSFOG00015006753)	BICRA (ENSSFOG00015030372)	ENSSFOG00015030910	napab (ENSSFOG00015006863)	bckdha (ENSSFOG00015006902)	ENSSFOG00015006932	ENSSFOG00015006947
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Amniota	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Theria	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Atlantogenata	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Afrotheria	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Tenrec	MODERN SPECIES	8178																ENSETEG00000009414 ##22
Sauria	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Archelosauria	ANCESTRAL SPECIES	62			ENSGT01100000263535.a.b	ENSGT00530000063991.b	ENSGT00950000183058.B	ENSGT00940000160272	ENSGT00390000013276	ENSGT00940000160297	ENSGT01100000263571	ENSGT00990000203527.b	ENSGT00990000203527.a.a.a.a	ENSGT00990000203527.a.b	ENSGT00950000185724	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT01100000263551.b.b.a ##22	ENSGT00950000183066.a.a.a	ENSGT01020000230438.B.a.b	ENSGT01020000230438.B.b.b.a.j	ENSGT00940000167735	ENSGT00940000160467	ENSGT01080000257333.D.b.b	ENSGT01080000257333.F
Cryptodira	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Chinese turtle	MODERN SPECIES	451															ETFB (ENSPSIG00000003378)	ENSPSIG00000003381 ##22	ENSPSIG00000001031	ENSPSIG00000001046	ENSPSIG00000003385	ENSPSIG00000003390	ENSPSIG00000003392	ENSPSIG00000003393	ENSPSIG00000001053	ENSPSIG00000003396
Archosauria	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Aves	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Neognathae	ANCESTRAL SPECIES																	ENSGT01100000263551.b.b.a ##22
Galloanserae	ANCESTRAL SPECIES	27	ENSGT00390000017627.b	ENSGT00940000158793	ENSGT00390000016247	ENSGT00940000158657	ENSGT00500000044966	ENSGT01100000263551.a ##22	ENSGT00940000168265	ENSGT00940000155457	ENSGT00390000013593	ENSGT00940000157231	ENSGT00440000039324	ENSGT00940000153972.B	ENSGT00940000158436	ENSGT00950000183160.A	ENSGT00390000008848	ENSGT01100000263551.b.b.a ##22	ENSGT00940000157114	ENSGT00940000159682	ENSGT00940000156655	ENSGT00390000018633	ENSGT00390000006114	ENSGT00550000074936	ENSGT00390000010215.B	ENSGT00510000048428	ENSGT00390000003924	ENSGT00940000158893	ENSGT00940000157126	ENSGT01040000244620	ENSGT00940000159519	ENSGT00940000158261	ENSGT00990000203615.b.b
Phasianidae	ANCESTRAL SPECIES	27	ENSGT00390000017627.b	ENSGT00940000158793	ENSGT00940000158657	ENSGT00500000044966	ENSGT01100000263551.a ##22	ENSGT00940000168265.a	ENSGT00940000155457	ENSGT00390000013593	ENSGT00940000157231	ENSGT00440000039324	ENSGT01080000259788	ENSGT00940000153972.B	ENSGT00940000158436	ENSGT00950000183160.A	ENSGT00390000008848	ENSGT01100000263551.b.b.a ##22	ENSGT00940000157114	ENSGT00940000159682	ENSGT00940000156655	ENSGT00390000018633	ENSGT00390000006114	ENSGT00550000074936	ENSGT00390000010215.B	ENSGT00510000048428	ENSGT00390000003924	ENSGT00940000158893	ENSGT00940000157126	ENSGT01040000244620	ENSGT00940000159519	ENSGT00940000158261	ENSGT00990000203615.b.b
Japanese quail	MODERN SPECIES	16	PKNOX2 (ENSCJPG00005005396)	ENSCJPG00005005411	SLC37A2 (ENSCJPG00005005418)	ENSCJPG00005005429	HEPACAM (ENSCJPG00005005431) ##22	ENSCJPG00005005446	ENSCJPG00005005447	MSANTD2 (ENSCJPG00005005523)	ESAM (ENSCJPG00005005527)	NRGN (ENSCJPG00005005533)	ENSCJPG00005005536	PANX3 (ENSCJPG00005005541)	RPUSD4 (ENSCJPG00005005543)	PUS3 (ENSCJPG00005005547)	HYLS1 (ENSCJPG00005005550)	ENSCJPG00005005551 ##22	CDON (ENSCJPG00005005577)	CHEK1 (ENSCJPG00005005689)	STT3A (ENSCJPG00005005693)	EI24 (ENSCJPG00005005702)	SRPRA (ENSCJPG00005005708)	FAM118B (ENSCJPG00005005710)	DCPS (ENSCJPG00005005716)	TIRAP (ENSCJPG00005005718)	ST3GAL4 (ENSCJPG00005005720)	KIRREL3 (ENSCJPG00005005735)	ETS1 (ENSCJPG00005006092)	FLI1 (ENSCJPG00005006095)	KCNJ1 (ENSCJPG00005006098)	KCNJ5 (ENSCJPG00005006100)	ENSCJPG00005006102
Phasianidae_b	ANCESTRAL SPECIES	26	ENSGT00390000017627.b	ENSGT00940000158793	ENSGT00940000158657	ENSGT00500000044966	ENSGT01100000263551.a ##22	ENSGT00940000168265.a	ENSGT00940000155457	ENSGT00390000013593	ENSGT00940000157231	ENSGT00440000039324	ENSGT01080000259788	ENSGT00940000153972.B	ENSGT00940000158436	ENSGT00950000183160.A	ENSGT00390000008848	ENSGT01100000263551.b.b.a ##22	ENSGT00940000157114	ENSGT00940000159682	ENSGT00940000156655	ENSGT00390000018633	ENSGT00390000006114	ENSGT00550000074936	ENSGT00390000010215.B	ENSGT00510000048428	ENSGT00390000003924	ENSGT00940000158893	ENSGT00940000157126	ENSGT01040000244620	ENSGT00940000159519	ENSGT00940000158261	ENSGT00990000203615.b.b
Chicken	MODERN SPECIES	16	SIK2 (ENSGALG00010024415)	FEZ1 (ENSGALG00010024431)	PKNOX2 (ENSGALG00010024440)	ENSGALG00010024511	HEPACAM (ENSGALG00010024521) ##22	ENSGALG00010024535	ROBO3 (ENSGALG00010024561)	MSANTD2 (ENSGALG00010024620)	ENSGALG00010024629	NRGN (ENSGALG00010024633)	ENSGALG00010024635	PANX3 (ENSGALG00010024636)	RPUSD4 (ENSGALG00010024647)	PUS3 (ENSGALG00010024652)	HYLS1 (ENSGALG00010024656)	ENSGALG00010024661 ##22	CDON (ENSGALG00010023809)	CHEK1 (ENSGALG00010023828)	STT3A (ENSGALG00010023837)	EI24 (ENSGALG00010023879)	FOXRED1 (ENSGALG00010023909)	SRPRA (ENSGALG00010023930)	FAM118B (ENSGALG00010023979)	TIRAP (ENSGALG00010024026)	DCPS (ENSGALG00010024042)	ST3GAL4 (ENSGALG00010024062)	KIRREL3 (ENSGALG00010024078)	ENSGALG00010024084	ETS1 (ENSGALG00010023311)	FLI1 (ENSGALG00010023337)	KCNJ1 (ENSGALG00010023426)
Gnathostomata	ANCESTRAL SPECIES	667																ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17
Euteleostomi	ANCESTRAL SPECIES	2	ENSGT00730000110871.a.a.b ##35	ENSGT00930000151026 #34	ENSGT00940000161427 #33	ENSGT00530000063721.A #32	ENSGT00940000157621 #31	ENSGT01050000244890.b #30	ENSGT00390000018554 #29	ENSGT00940000167569	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT00390000013973.A.a.d	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Sarcopterygii	ANCESTRAL SPECIES		ENSGT00730000110871.a.a.b ##35	ENSGT00930000151026 #34	ENSGT00940000161427 #33	ENSGT00530000063721.A #32	ENSGT00940000157621 #31	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000167569	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT00390000013973.A.a.d	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000159917 #19	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Tetrapoda	ANCESTRAL SPECIES	7	ENSGT00530000063817.a #36	ENSGT00730000110871.b ##35	ENSGT00930000151026 #34	ENSGT00940000161427 #33	ENSGT00530000063721.A #32	ENSGT00940000157621 #31	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000167569	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT00390000013973.A.a.d	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Amniota	ANCESTRAL SPECIES	7	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Sauria	ANCESTRAL SPECIES	15	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Archosauria	ANCESTRAL SPECIES		ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584
Aves	ANCESTRAL SPECIES	5	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00960000189068	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584
Neognathae	ANCESTRAL SPECIES		ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00960000189068	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584
Neognathae_b	ANCESTRAL SPECIES	9	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589
Great tit	MODERN SPECIES	11	SEM1 (ENSPMJG00000010043)	SLC25A13 (ENSPMJG00000010007)	DYNC1I1 (ENSPMJG00000010005)	PDK4 (ENSPMJG00000009929)	ASB4 (ENSPMJG00000009928) #7	ENSPMJG00000009926 #8	PPP1R9A (ENSPMJG00000009922) #11	SGCE (ENSPMJG00000009763) #13	CASD1 (ENSPMJG00000009752) #14	COL1A2 (ENSPMJG00000008138) #15	ENSPMJG00000007972	ENSPMJG00000007971	TFPI2 (ENSPMJG00000007970) #19	CALCR (ENSPMJG00000007926) #20	VPS50 (ENSPMJG00000007921) #21	HEPACAM2 (ENSPMJG00000007813) #22	CDK6 (ENSPMJG00000007804) #23	CLXN (ENSPMJG00000007773)	RBM48 (ENSPMJG00000007771) #27	PEX1 (ENSPMJG00000007769) #28	GATAD1 (ENSPMJG00000007766) #29	ANKIB1 (ENSPMJG00000007757) #31	KRIT1 (ENSPMJG00000007754) #32	CYP51A1 (ENSPMJG00000007751) #34	ENSPMJG00000007741 #35	ENSPMJG00000007659 #35	FZD1 (ENSPMJG00000007569)	CDK14 (ENSPMJG00000007560)	ENSPMJG00000007462	CLDN12 (ENSPMJG00000007461)	ENSPMJG00000007460
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589
Medium ground finch	MODERN SPECIES	10	ENSGFOG00000000956	SLC25A13 (ENSGFOG00000000964)	DYNC1I1 (ENSGFOG00000000981)	PDK4 (ENSGFOG00000001010)	ASB4 (ENSGFOG00000001056) #7	ENSGFOG00000001066 #8	PPP1R9A (ENSGFOG00000001092) #11	SGCE (ENSGFOG00000001144) #13	CASD1 (ENSGFOG00000001162) #14	COL1A2 (ENSGFOG00000001270) #15	ENSGFOG00000002023	ENSGFOG00000002076	TFPI2 (ENSGFOG00000002106) #19	CALCR (ENSGFOG00000002118) #20	VPS50 (ENSGFOG00000002197) #21	HEPACAM2 (ENSGFOG00000003151) #22	CDK6 (ENSGFOG00000003222) #23	ENSGFOG00000003239 #25	CLXN (ENSGFOG00000003251)	RBM48 (ENSGFOG00000003266) #27	PEX1 (ENSGFOG00000003279) #28	GATAD1 (ENSGFOG00000003346) #29	ANKIB1 (ENSGFOG00000003360) #31	KRIT1 (ENSGFOG00000003400) #32	CYP51A1 (ENSGFOG00000003428) #34	AKAP9 (ENSGFOG00000003475) #35	FZD1 (ENSGFOG00000003702)	CDK14 (ENSGFOG00000003711)	CLDN12 (ENSGFOG00000003731)	GTPBP10 (ENSGFOG00000003741)	ENSGFOG00000003749
Passeroidea	ANCESTRAL SPECIES	6	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984	ENSGT00400000022250	ENSGT00940000155589
Zebra finch	MODERN SPECIES	12	ENSTGUG00000026321	SLC25A13 (ENSTGUG00000001620)	PDK4 (ENSTGUG00000001585)	DYNC1I1 (ENSTGUG00000001589)	ASB4 (ENSTGUG00000001584) #7	ENSTGUG00000001577 #8	PPP1R9A (ENSTGUG00000001566) #11	SGCE (ENSTGUG00000001558) #13	CASD1 (ENSTGUG00000001556) #14	COL1A2 (ENSTGUG00000001522) #15	BET1 (ENSTGUG00000029415)	ENSTGUG00000001518	TFPI2 (ENSTGUG00000001515) #19	CALCR (ENSTGUG00000001514) #20	VPS50 (ENSTGUG00000001501) #21	HEPACAM2 (ENSTGUG00000001498) #22	FAM133B (ENSTGUG00000001494) #23	CLXN (ENSTGUG00000001491)	RBM48 (ENSTGUG00000001489) #27	PEX1 (ENSTGUG00000001478) #28	GATAD1 (ENSTGUG00000027451) #29	ANKIB1 (ENSTGUG00000001471) #31	KRIT1 (ENSTGUG00000001459) #32	CYP51A1 (ENSTGUG00000001451) #34	AKAP9 (ENSTGUG00000001443) #35	FZD1 (ENSTGUG00000001442)	CDK14 (ENSTGUG00000001434)	ENSTGUG00000019557	CLDN12 (ENSTGUG00000019374)	GTPBP10 (ENSTGUG00000001430)	FAM237B (ENSTGUG00000001429)
Common canary	MODERN SPECIES	5	ENSSCAG00000013068	PDK4 (ENSSCAG00000013066)	ASB4 (ENSSCAG00000013057) #7	ENSSCAG00000013053 #8	PPP1R9A (ENSSCAG00000013038) #11	SGCE (ENSSCAG00000013022) #13	CASD1 (ENSSCAG00000013009) #14	COL1A2 (ENSSCAG00000012537) #15	ENSSCAG00000012456	ENSSCAG00000012452	ENSSCAG00000012444	GNG11 (ENSSCAG00000012426) #17	TFPI2 (ENSSCAG00000012420) #19	CALCR (ENSSCAG00000012374) #20	VPS50 (ENSSCAG00000012354) #21	HEPACAM2 (ENSSCAG00000012349) #22	CDK6 (ENSSCAG00000012344) #23	ENSSCAG00000012337 #25	CLXN (ENSSCAG00000012331)	RBM48 (ENSSCAG00000012329) #27	PEX1 (ENSSCAG00000012248) #28	ENSSCAG00000012227 #29	ANKIB1 (ENSSCAG00000012218) #31	KRIT1 (ENSSCAG00000012203) #32	CYP51A1 (ENSSCAG00000012189) #34	AKAP9 (ENSSCAG00000012107) #35	FZD1 (ENSSCAG00000012081)	CDK14 (ENSSCAG00000012042)	CLDN12 (ENSSCAG00000012031)	GTPBP10 (ENSSCAG00000012028)	FAM237B (ENSSCAG00000012026)
Flycatcher	MODERN SPECIES	11	SLC25A13 (ENSFALG00000010269)	DYNC1I1 (ENSFALG00000010272)	PDK4 (ENSFALG00000010276)	ASB4 (ENSFALG00000010284) #7	ENSFALG00000025037 #8	PPP1R9A (ENSFALG00000010302) #11	SGCE (ENSFALG00000023681) #13	CASD1 (ENSFALG00000010341) #14	COL1A2 (ENSFALG00000010356) #15	ENSFALG00000026752	ENSFALG00000014556	ENSFALG00000010379	TFPI2 (ENSFALG00000010381) #19	CALCR (ENSFALG00000010383) #20	VPS50 (ENSFALG00000010387) #21	HEPACAM2 (ENSFALG00000010392) #22	CDK6 (ENSFALG00000010409) #23	ENSFALG00000010425	RBM48 (ENSFALG00000010436) #27	PEX1 (ENSFALG00000010442) #28	ENSFALG00000010445 #29	ANKIB1 (ENSFALG00000010447) #31	KRIT1 (ENSFALG00000010460) #32	CYP51A1 (ENSFALG00000010478) #34	AKAP9 (ENSFALG00000010490) #35	FZD1 (ENSFALG00000014488)	CDK14 (ENSFALG00000027050)	ENSFALG00000027111	CLDN12 (ENSFALG00000014474)	GTPBP10 (ENSFALG00000007709)	FAM237B (ENSFALG00000014461)
Neognathae_c	ANCESTRAL SPECIES	12	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584	ENSGT00940000157640	ENSGT00940000164984
Kakapo	MODERN SPECIES		ENSSHBG00005015559	ENSSHBG00005015557	ENSSHBG00005015554	B3GAT3 (ENSSHBG00005015550)	EML3 (ENSSHBG00005008234)	MTA2 (ENSSHBG00005007908)	TUT1 (ENSSHBG00005007867)	TAF6L (ENSSHBG00005007828)	TMEM179B (ENSSHBG00005007816)	BCAP31 (ENSSHBG00005007801)	TAFAZZIN (ENSSHBG00005007791)	WDR13 (ENSSHBG00005007776)	SUV39H1 (ENSSHBG00005007762)	CALCR (ENSSHBG00005007738) #20	VPS50 (ENSSHBG00005007626) #21	HEPACAM2 (ENSSHBG00005007548) #22	CDK6 (ENSSHBG00005007526) #23	ENSSHBG00005007500 #25	CLXN (ENSSHBG00005007483)	RBM48 (ENSSHBG00005007466) #27	PEX1 (ENSSHBG00005006166) #28	GATAD1 (ENSSHBG00005005890) #29	ANKIB1 (ENSSHBG00005005865) #31	KRIT1 (ENSSHBG00005005836) #32	CYP51A1 (ENSSHBG00005005801) #34	AKAP9 (ENSSHBG00005005677) #35	FZD1 (ENSSHBG00005005639)	CDK14 (ENSSHBG00005005624)	ENSSHBG00005005595	CLDN12 (ENSSHBG00005005580)	ENSSHBG00005005572
Golden eagle	MODERN SPECIES	19	SEM1 (ENSACCG00020010928)	SLC25A13 (ENSACCG00020010955)	DYNC1I1 (ENSACCG00020010997)	PDK4 (ENSACCG00020000315)	ASB4 (ENSACCG00020000336) #7	ENSACCG00020000364 #8	PPP1R9A (ENSACCG00020000421) #11	SGCE (ENSACCG00020000514) #13	CASD1 (ENSACCG00020000568) #14	COL1A2 (ENSACCG00020001204) #15	ENSACCG00020001792	ENSACCG00020001809	TFPI2 (ENSACCG00020001845) #19	CALCR (ENSACCG00020001885) #20	VPS50 (ENSACCG00020001926) #21	HEPACAM2 (ENSACCG00020001974) #22	CDK6 (ENSACCG00020001993) #23	ENSACCG00020002010 #25	CLXN (ENSACCG00020002037)	RBM48 (ENSACCG00020002052) #27	PEX1 (ENSACCG00020002073) #28	ENSACCG00020002108	GATAD1 (ENSACCG00020002144) #29	ANKIB1 (ENSACCG00020002178) #31	KRIT1 (ENSACCG00020002209) #32	ENSACCG00020002249 #33	CYP51A1 (ENSACCG00020002273) #34	ENSACCG00020002311 #35	ENSACCG00020002341 #35	FZD1 (ENSACCG00020002352)	CDK14 (ENSACCG00020002388)
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538.bb #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00960000189068	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538.bb #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00960000189068	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000164558.a.a	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584
Duck	MODERN SPECIES	10	PDK4 (ENSAPLG00000015678)	ASB4 (ENSAPLG00000015492) #7	ENSAPLG00000014945 #8	ENSAPLG00000017093 #11	ENSAPLG00000014577 #11	SGCE (ENSAPLG00000014328) #13	ENSAPLG00000030575	CASD1 (ENSAPLG00000014013) #14	COL1A2 (ENSAPLG00000011169) #15	ENSAPLG00000022424	ENSAPLG00000010896	GNG11 (ENSAPLG00000021155) #17	TFPI2 (ENSAPLG00000017562) #19	CALCR (ENSAPLG00000010377) #20	VPS50 (ENSAPLG00000009583) #21	HEPACAM2 (ENSAPLG00000009516) #22	ENSAPLG00000002252	CDK6 (ENSAPLG00000009363) #23	ENSAPLG00000009245 #25	PEX1 (ENSAPLG00000008576) #28	ENSAPLG00000008401	GATAD1 (ENSAPLG00000018481) #29	ENSAPLG00000007995	ENSAPLG00000020257 #31	KRIT1 (ENSAPLG00000007618) #32	ENSAPLG00000023805	CYP51A1 (ENSAPLG00000007247) #34	ENSAPLG00000006632 #35	ENSAPLG00000006544 #35	FZD1 (ENSAPLG00000006538)	CDK14 (ENSAPLG00000006499)
Pink-footed goose	MODERN SPECIES		SLC25A13 (ENSABRG00000003825)	DYNC1I1 (ENSABRG00000003856)	PDK4 (ENSABRG00000003915)	ASB4 (ENSABRG00000003971) #7	ENSABRG00000004054 #8	PPP1R9A (ENSABRG00000004918) #11	SGCE (ENSABRG00000006848) #13	CASD1 (ENSABRG00000007011) #14	COL1A2 (ENSABRG00000007323) #15	ENSABRG00000008162	ENSABRG00000008175	GNG11 (ENSABRG00000008206) #17	TFPI2 (ENSABRG00000008255) #19	CALCR (ENSABRG00000008441) #20	VPS50 (ENSABRG00000008511) #21	HEPACAM2 (ENSABRG00000008650) #22	ENSABRG00000008708	CDK6 (ENSABRG00000008732) #23	ENSABRG00000008761 #25	CLXN (ENSABRG00000008786)	RBM48 (ENSABRG00000008826) #27	PEX1 (ENSABRG00000008865) #28	ENSABRG00000008935	GATAD1 (ENSABRG00000009022) #29	ANKIB1 (ENSABRG00000009431) #31	KRIT1 (ENSABRG00000010210) #32	ENSABRG00000011018	ENSABRG00000011057	CYP51A1 (ENSABRG00000011095) #34	AKAP9 (ENSABRG00000012449) #35	FZD1 (ENSABRG00000015920)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538.bb #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037.g #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380.ce #20	ENSGT00390000003442.k #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097.j #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584.a	ENSGT00940000157640
Japanese quail	MODERN SPECIES	11	DYNC1I1 (ENSCJPG00005011488)	PDK4 (ENSCJPG00005011473)	ASB4 (ENSCJPG00005011472) #7	ENSCJPG00005011468 #8	PPP1R9A (ENSCJPG00005011457) #11	SGCE (ENSCJPG00005011442) #13	CASD1 (ENSCJPG00005011435) #14	COL1A2 (ENSCJPG00005009957) #15	ENSCJPG00005009910	ENSCJPG00005009909	ENSCJPG00005009906	GNG11 (ENSCJPG00005009908) #17	TFPI2 (ENSCJPG00005009904) #19	CALCR (ENSCJPG00005009889) #20	VPS50 (ENSCJPG00005009737) #21	HEPACAM2 (ENSCJPG00005009731) #22	ENSCJPG00005009730	CDK6 (ENSCJPG00005009715) #23	ENSCJPG00005009714 #25	CLXN (ENSCJPG00005009713)	RBM48 (ENSCJPG00005009712) #27	PEX1 (ENSCJPG00005009529) #28	ENSCJPG00005009528	GATAD1 (ENSCJPG00005009527) #29	ANKIB1 (ENSCJPG00005009485) #31	KRIT1 (ENSCJPG00005009309) #32	ENSCJPG00005009308 #33	CYP51A1 (ENSCJPG00005009307) #34	AKAP9 (ENSCJPG00005006018) #35	FZD1 (ENSCJPG00005005989)	CDK14 (ENSCJPG00005005987)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538.bb #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037.g #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380.be #20	ENSGT00390000003442.k #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097.i #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000164558.a.a	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00940000162584.a	ENSGT00940000157640
Turkey	MODERN SPECIES	26	ENSMGAG00000016691 #35	ENSMGAG00000008609 #34	ENSMGAG00000020965	ENSMGAG00000008626 #32	ENSMGAG00000008650 #31	ENSMGAG00000008672 #29	ENSMGAG00000021886	ENSMGAG00000018746	ENSMGAG00000008711 #28	ENSMGAG00000008769	ENSMGAG00000008755 #27	ENSMGAG00000017575 #25	ENSMGAG00000018151 #25	CDK6 (ENSMGAG00000008824) #23	ENSMGAG00000022975 #23	ENSMGAG00000008840 #22	ENSMGAG00000016035	ENSMGAG00000018795 #21	ENSMGAG00000008845 #21	ENSMGAG00000009025 #20	ENSMGAG00000020984 #20	ENSMGAG00000008749 #19	ENSMGAG00000008936	ENSMGAG00000008945 #14	ENSMGAG00000019071 #14	ENSMGAG00000008964 #13	ENSMGAG00000021087	ENSMGAG00000009555 #11	ENSMGAG00000017973 #11	ENSMGAG00000009564 #8	ENSMGAG00000009610
Chicken	MODERN SPECIES	11	SLC25A13 (ENSGALG00010003666)	DYNC1I1 (ENSGALG00010003506)	PDK4 (ENSGALG00010002741)	ASB4 (ENSGALG00010002928) #7	PON1 (ENSGALG00010002904) #8	PPP1R9A (ENSGALG00010002868) #11	SGCE (ENSGALG00010003489) #13	CASD1 (ENSGALG00010003366) #14	COL1A2 (ENSGALG00010003307) #15	BET1 (ENSGALG00010003184)	ENSGALG00010003152	GNG11 (ENSGALG00010003107) #17	TFPI2 (ENSGALG00010003097) #19	CALCR (ENSGALG00010003255) #20	VPS50 (ENSGALG00010003243) #21	HEPACAM2 (ENSGALG00010003238) #22	ENSGALG00010005012	CDK6 (ENSGALG00010005004) #23	FAM133B (ENSGALG00010004991) #25	CLXN (ENSGALG00010004983)	RBM48 (ENSGALG00010004970) #27	PEX1 (ENSGALG00010004952) #28	ENSGALG00010004929	GATAD1 (ENSGALG00010004899) #29	ANKIB1 (ENSGALG00010004891) #31	KRIT1 (ENSGALG00010004883) #32	ENSGALG00010004879	CYP51A1 (ENSGALG00010005267) #34	AKAP9 (ENSGALG00010004841) #35	FZD1 (ENSGALG00010004791)	CDK14 (ENSGALG00010004777)
African ostrich	MODERN SPECIES	583	DYNC1I1 (ENSSCUG00000012875)	PDK4 (ENSSCUG00000012865)	ASB4 (ENSSCUG00000012862) #7	ENSSCUG00000012859 #8	PPP1R9A (ENSSCUG00000012845) #11	SGCE (ENSSCUG00000012834) #13	CASD1 (ENSSCUG00000012828) #14	COL1A2 (ENSSCUG00000012794) #15	ENSSCUG00000012760	ENSSCUG00000012757	ENSSCUG00000012754	ENSSCUG00000012752 #19	ENSSCUG00000012751 #19	CALCR (ENSSCUG00000012745) #20	VPS50 (ENSSCUG00000012729) #21	HEPACAM2 (ENSSCUG00000012716) #22	ENSSCUG00000012712	CDK6 (ENSSCUG00000012707) #23	ENSSCUG00000012704 #25	CLXN (ENSSCUG00000012702)	RBM48 (ENSSCUG00000012700) #27	PEX1 (ENSSCUG00000012697) #28	ENSSCUG00000012696	ENSSCUG00000012693 #29	ANKIB1 (ENSSCUG00000012690) #31	KRIT1 (ENSSCUG00000012686) #32	ENSSCUG00000012684	CYP51A1 (ENSSCUG00000012680) #34	AKAP9 (ENSSCUG00000012510) #35	CDK14 (ENSSCUG00000012404)	ENSSCUG00000012402
Australian saltwater crocodile	MODERN SPECIES		SEM1 (ENSCPRG00005014353)	SLC25A13 (ENSCPRG00005014321)	DYNC1I1 (ENSCPRG00005014300)	PDK4 (ENSCPRG00005014274)	ASB4 (ENSCPRG00005014271) #7	ENSCPRG00005014261 #8	PPP1R9A (ENSCPRG00005014256) #11	SGCE (ENSCPRG00005014246) #13	CASD1 (ENSCPRG00005014236) #14	COL1A2 (ENSCPRG00005014088) #15	ENSCPRG00005014058	GNG11 (ENSCPRG00005014055) #17	TFPI2 (ENSCPRG00005014053) #19	CALCR (ENSCPRG00005014005) #20	VPS50 (ENSCPRG00005013792) #21	HEPACAM2 (ENSCPRG00005013774) #22	ENSCPRG00005013759	CDK6 (ENSCPRG00005013757) #23	ENSCPRG00005013719 #25	CLXN (ENSCPRG00005013714)	RBM48 (ENSCPRG00005013710) #27	PEX1 (ENSCPRG00005013561) #28	ENSCPRG00005013532	GATAD1 (ENSCPRG00005013523) #29	ENSCPRG00005013519 #30	ANKIB1 (ENSCPRG00005013517) #31	KRIT1 (ENSCPRG00005013501) #32	ENSCPRG00005013496	CYP51A1 (ENSCPRG00005013473) #34	AKAP9 (ENSCPRG00005012816) #35	FZD1 (ENSCPRG00005012567)
Cryptodira	ANCESTRAL SPECIES	4	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b.a	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b.b	ENSGT01030000234646.B.a.a.a.b.a	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Goode s thornscrub tortoise	MODERN SPECIES	11	SLC25A13 (ENSGEVG00005018741)	DYNC1I1 (ENSGEVG00005018591)	ENSGEVG00005018552	ENSGEVG00005018530	ASB4 (ENSGEVG00005018500) #7	ENSGEVG00005018431 #8	PPP1R9A (ENSGEVG00005018351) #11	SGCE (ENSGEVG00005017638) #13	CASD1 (ENSGEVG00005017491) #14	COL1A2 (ENSGEVG00005017241) #15	ENSGEVG00005017186	GNG11 (ENSGEVG00005017168) #17	TFPI2 (ENSGEVG00005017045) #19	CALCR (ENSGEVG00005016730) #20	VPS50 (ENSGEVG00005016656) #21	HEPACAM2 (ENSGEVG00005016527) #22	ENSGEVG00005016511	CDK6 (ENSGEVG00005016493) #23	ENSGEVG00005016486 #25	CLXN (ENSGEVG00005016407)	RBM48 (ENSGEVG00005016388) #27	PEX1 (ENSGEVG00005016281) #28	ENSGEVG00005016220	GATAD1 (ENSGEVG00005016194) #29	ANKIB1 (ENSGEVG00005016152) #31	KRIT1 (ENSGEVG00005016100) #32	LRRD1 (ENSGEVG00005016053) #33	CYP51A1 (ENSGEVG00005016020) #34	ENSGEVG00005015774 #35	ENSGEVG00005015704 #35	MTERF1 (ENSGEVG00005015683) #36
Abingdon island giant tortoise	MODERN SPECIES	1100					ENSCABG00000000683 #8	PPP1R9A (ENSCABG00000000689) #11	SGCE (ENSCABG00000000724) #13	ENSCABG00000001098	CASD1 (ENSCABG00000001104) #14	COL1A2 (ENSCABG00000001144) #15	ENSCABG00000001635	GNG11 (ENSCABG00000001636) #17	TFPI2 (ENSCABG00000001640) #19	CALCR (ENSCABG00000001655) #20	VPS50 (ENSCABG00000001918) #21	HEPACAM2 (ENSCABG00000002811) #22	ENSCABG00000002817	CDK6 (ENSCABG00000002824) #23
Emydidae	ANCESTRAL SPECIES	34	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b.a	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Three-toed box turtle	MODERN SPECIES	30	SLC25A13 (ENSTMTG00000005981)	DYNC1I1 (ENSTMTG00000006042)	PDK4 (ENSTMTG00000006214)	ASB4 (ENSTMTG00000006250) #7	ENSTMTG00000006278 #8	PPP1R9A (ENSTMTG00000006314) #11	SGCE (ENSTMTG00000006348) #13	CASD1 (ENSTMTG00000006388) #14	COL1A2 (ENSTMTG00000006595) #15	ENSTMTG00000009167	ENSTMTG00000009185	GNG11 (ENSTMTG00000009201) #17	TFPI2 (ENSTMTG00000009209) #19	CALCR (ENSTMTG00000009283) #20	VPS50 (ENSTMTG00000009626) #21	HEPACAM2 (ENSTMTG00000009695) #22	CDK6 (ENSTMTG00000009854) #23	ENSTMTG00000009871 #25	CLXN (ENSTMTG00000009898)	RBM48 (ENSTMTG00000009981) #27	PEX1 (ENSTMTG00000010005) #28	ENSTMTG00000010106	GATAD1 (ENSTMTG00000010127) #29	ANKIB1 (ENSTMTG00000010139) #31	KRIT1 (ENSTMTG00000010183) #32	LRRD1 (ENSTMTG00000010220) #33	CYP51A1 (ENSTMTG00000010251) #34	ENSTMTG00000010340 #35	ENSTMTG00000010504 #35	MTERF1 (ENSTMTG00000010522) #36	FZD1 (ENSTMTG00000010532)
painted turtle	MODERN SPECIES	2405	ENSCPBG00000024409	PDK4 (ENSCPBG00000024410)	ASB4 (ENSCPBG00000024411) #7	ENSCPBG00000024412 #8	PPP1R9A (ENSCPBG00000024414) #11	SGCE (ENSCPBG00000024415) #13	ENSCPBG00000024417	CASD1 (ENSCPBG00000024418) #14	COL1A2 (ENSCPBG00000024431) #15	ENSCPBG00000024540	ENSCPBG00000024541	GNG11 (ENSCPBG00000024544) #17	TFPI2 (ENSCPBG00000024545) #19	CALCR (ENSCPBG00000024547) #20	VPS50 (ENSCPBG00000024559) #21	HEPACAM2 (ENSCPBG00000024569) #22	ENSCPBG00000024573	CDK6 (ENSCPBG00000024578) #23	CLXN (ENSCPBG00000024584)	RBM48 (ENSCPBG00000024588) #27	PEX1 (ENSCPBG00000024596) #28	ENSCPBG00000024611
Chinese turtle	MODERN SPECIES	414	DYNC1I1 (ENSPSIG00000018144)	PDK4 (ENSPSIG00000017954)	ASB4 (ENSPSIG00000017877) #7	ENSPSIG00000017556 #8	PPP1R9A (ENSPSIG00000017277) #11	SGCE (ENSPSIG00000017123) #13	CASD1 (ENSPSIG00000016515) #14	COL1A2 (ENSPSIG00000014526) #15	ENSPSIG00000001686	ENSPSIG00000014505	ENSPSIG00000014499	GNG11 (ENSPSIG00000014234) #17	TFPI2 (ENSPSIG00000014164) #19	CALCR (ENSPSIG00000013441) #20	VPS50 (ENSPSIG00000011338) #21	HEPACAM2 (ENSPSIG00000010370) #22	ENSPSIG00000010290	CDK6 (ENSPSIG00000010284) #23	ENSPSIG00000010143 #25	CLXN (ENSPSIG00000010125)	RBM48 (ENSPSIG00000010120) #27	PEX1 (ENSPSIG00000009543) #28	ENSPSIG00000008587	GATAD1 (ENSPSIG00000008568) #29	ANKIB1 (ENSPSIG00000007300) #31	KRIT1 (ENSPSIG00000018002) #32	LRRD1 (ENSPSIG00000017970) #33	CYP51A1 (ENSPSIG00000017532) #34	AKAP9 (ENSPSIG00000016947) #35	MTERF1 (ENSPSIG00000016905) #36	CDK14 (ENSPSIG00000016488)
Lepidosauria	ANCESTRAL SPECIES	5	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000156270.h	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000156270.h	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Elapidae	ANCESTRAL SPECIES	5	ENSGT00940000162732	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00390000004541.b #27	ENSGT00730000111097 #25	ENSGT00940000156098	ENSGT00510000049635	ENSGT00940000161000.j.a	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.ib	ENSGT00390000015971.c	ENSGT00940000156678	ENSGT00940000157711	ENSGT00940000154775.c.b	ENSGT00940000156390
Elapidae_a	ANCESTRAL SPECIES	98	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b.k #13	ENSGT00390000004037.i.a #14	ENSGT00390000005672.a.b.l #13	ENSGT00390000004037.i.b #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00390000004541.b #27	ENSGT00730000111097 #25	ENSGT00940000156098.e	ENSGT00510000049635	ENSGT00940000161000.j.a	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.ib	ENSGT00390000015971.c	ENSGT00940000156678	ENSGT00940000157711	ENSGT00940000154775.c.b	ENSGT00940000156390
Acanthophiinae	ANCESTRAL SPECIES	91	ENSGT00940000162732	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b.l #13	ENSGT00390000004037.i.b #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00390000004541.b #27	ENSGT00730000111097 #25	ENSGT00940000156098.e	ENSGT00510000049635	ENSGT00940000161000.j.a	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.ib	ENSGT00390000015971.c	ENSGT00940000156678	ENSGT00940000157711	ENSGT00940000154775.c.b	ENSGT00940000156390
Eastern brown snake	MODERN SPECIES	31	DYNC1I1 (ENSPTXG00000013603)	PDK4 (ENSPTXG00000013594)	ASB4 (ENSPTXG00000013589) #7	ENSPTXG00000013587	ENSPTXG00000013557 #8	PPP1R9A (ENSPTXG00000005898) #11	SGCE (ENSPTXG00000005081) #13	CASD1 (ENSPTXG00000005080) #14	COL1A2 (ENSPTXG00000005079) #15	ENSPTXG00000005078	ENSPTXG00000005077	GNG11 (ENSPTXG00000005076) #17	ENSPTXG00000005075	CALCR (ENSPTXG00000005074) #20	VPS50 (ENSPTXG00000005073) #21	HEPACAM2 (ENSPTXG00000005072) #22	CDK6 (ENSPTXG00000005071) #23	ENSPTXG00000005070	ENSPTXG00000005069 #25	ENSPTXG00000005067	KIAA1217 (ENSPTXG00000005065)	OTUD1 (ENSPTXG00000005064)	PTF1A (ENSPTXG00000005063)	ARMC3 (ENSPTXG00000005024)	PIP4K2A (ENSPTXG00000004415)	SPAG6 (ENSPTXG00000004409)	ENSPTXG00000004407	ENSPTXG00000004406	DNAJC1 (ENSPTXG00000004405)	MLLT10 (ENSPTXG00000004403)	NEBL (ENSPTXG00000004397)
Mainland tiger snake	MODERN SPECIES	76	SLC25A13 (ENSNSUG00000006540)	ENSNSUG00000008621	ENSNSUG00000008625	PDK4 (ENSNSUG00000008628)	ASB4 (ENSNSUG00000008629) #7	ENSNSUG00000008630 #8	PPP1R9A (ENSNSUG00000008631) #11	SGCE (ENSNSUG00000008644) #13	CASD1 (ENSNSUG00000008858) #14	COL1A2 (ENSNSUG00000008859) #15	ENSNSUG00000009198	ENSNSUG00000009199	GNG11 (ENSNSUG00000009200) #17	CALCR (ENSNSUG00000009201) #20	VPS50 (ENSNSUG00000009202) #21	HEPACAM2 (ENSNSUG00000009332) #22	CDK6 (ENSNSUG00000009333) #23	ENSNSUG00000009336 #27	ENSNSUG00000009337 #25	KIAA1217 (ENSNSUG00000009339)	ENSNSUG00000009340	OTUD1 (ENSNSUG00000009342)	ENSNSUG00000009344	ARMC3 (ENSNSUG00000009345)	PIP4K2A (ENSNSUG00000009432)	SPAG6 (ENSNSUG00000009433)	ENSNSUG00000009434	ENSNSUG00000009435	DNAJC1 (ENSNSUG00000009436)	ENSNSUG00000009437	ENSNSUG00000009439
Blue-lipped sea krait	MODERN SPECIES	2808																HEPACAM2 (ENSLLTG00000000362) #22
Indian cobra	MODERN SPECIES	337	SEM1 (ENSNNAG00000016383)	SLC25A13 (ENSNNAG00000016372)	ENSNNAG00000016365	DYNC1I1 (ENSNNAG00000016316)	PDK4 (ENSNNAG00000016287)	ASB4 (ENSNNAG00000016270) #7	ENSNNAG00000016258 #8	ENSNNAG00000016247 #11	SGCE (ENSNNAG00000015989) #13	CASD1 (ENSNNAG00000015965) #14	COL1A2 (ENSNNAG00000013513) #15	ENSNNAG00000013332	GNG11 (ENSNNAG00000013324) #17	ENSNNAG00000013296 #20	VPS50 (ENSNNAG00000011890) #21	HEPACAM2 (ENSNNAG00000011788) #22	CDK6 (ENSNNAG00000011746) #23	ENSNNAG00000011731 #25	ENSNNAG00000011659	ENSNNAG00000011623	OTUD1 (ENSNNAG00000011606)	PTF1A (ENSNNAG00000011587)	ARMC3 (ENSNNAG00000011505)	PIP4K2A (ENSNNAG00000011444)	ENSNNAG00000011419	SPAG6 (ENSNNAG00000011333)	BMI1 (ENSNNAG00000011312)	ENSNNAG00000011266	DNAJC1 (ENSNNAG00000011251)	MLLT10 (ENSNNAG00000011164)	NEBL (ENSNNAG00000010937)
Lizard	MODERN SPECIES	5	SLC25A13 (ENSACAG00000014580)	DYNC1I1 (ENSACAG00000014180)	PDK4 (ENSACAG00000014020)	ASB4 (ENSACAG00000013993) #7	ENSACAG00000013907 #8	PPP1R9A (ENSACAG00000027389) #11	SGCE (ENSACAG00000013695) #13	CASD1 (ENSACAG00000013610) #14	COL1A2 (ENSACAG00000013301) #15	ENSACAG00000013288	ENSACAG00000028975	GNG11 (ENSACAG00000039873) #17	TFPI2 (ENSACAG00000013275) #19	CALCR (ENSACAG00000013135) #20	VPS50 (ENSACAG00000012934) #21	HEPACAM2 (ENSACAG00000012904) #22	ENSACAG00000012901	ENSACAG00000040484	ENSACAG00000044913	CDK6 (ENSACAG00000015273) #23	ENSACAG00000015319 #25	ENSACAG00000015360	RBM48 (ENSACAG00000015378) #27	PEX1 (ENSACAG00000015394) #28	ENSACAG00000036308	ENSACAG00000015461	GATAD1 (ENSACAG00000015498) #29	ANKIB1 (ENSACAG00000015516) #31	KRIT1 (ENSACAG00000015550) #32	ENSACAG00000015646	CYP51A1 (ENSACAG00000015660) #34
Laterata	ANCESTRAL SPECIES	10	ENSGT00940000159344	ENSGT00940000156032.g	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932 #8	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00940000167569	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000156270.h	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Argentine black and white tegu	MODERN SPECIES	5	ENSSMRG00000008629	PDK4 (ENSSMRG00000008630)	ASB4 (ENSSMRG00000008633) #7	ENSSMRG00000008634 #8	ENSSMRG00000008637 #8	PPP1R9A (ENSSMRG00000008639) #11	SGCE (ENSSMRG00000009487) #13	CASD1 (ENSSMRG00000009493) #14	COL1A2 (ENSSMRG00000009497) #15	ENSSMRG00000011091	ENSSMRG00000011092	GNG11 (ENSSMRG00000011093) #17	TFPI2 (ENSSMRG00000011095) #19	CALCR (ENSSMRG00000011159) #20	VPS50 (ENSSMRG00000011224) #21	HEPACAM2 (ENSSMRG00000011230) #22	ENSSMRG00000011244	CDK6 (ENSSMRG00000011309) #23	CLXN (ENSSMRG00000011313)	RBM48 (ENSSMRG00000011316) #27	PEX1 (ENSSMRG00000011319) #28	ENSSMRG00000011324	GATAD1 (ENSSMRG00000011328) #29	ENSSMRG00000011330 #30	ANKIB1 (ENSSMRG00000011331) #31	KRIT1 (ENSSMRG00000011385) #32	ENSSMRG00000011386	CYP51A1 (ENSSMRG00000011387) #34	AKAP9 (ENSSMRG00000011405) #35	FZD1 (ENSSMRG00000013692)	CDK14 (ENSSMRG00000013693)
Common wall lizard	MODERN SPECIES	3	DYNC1I1 (ENSPMRG00000017921)	PDK4 (ENSPMRG00000017905)	ENSPMRG00000017894 #8	ENSPMRG00000017887	PPP1R9A (ENSPMRG00000017863) #11	SGCE (ENSPMRG00000017680) #13	CASD1 (ENSPMRG00000017616) #14	COL1A2 (ENSPMRG00000017574) #15	ENSPMRG00000017564	ENSPMRG00000017548	GNG11 (ENSPMRG00000017542) #17	ENSPMRG00000017522 #19	ENSPMRG00000017501 #19	CALCR (ENSPMRG00000017489) #20	VPS50 (ENSPMRG00000017368) #21	HEPACAM2 (ENSPMRG00000017339) #22	ENSPMRG00000017333	ENSPMRG00000017330	CDK6 (ENSPMRG00000017323) #23	ENSPMRG00000017311 #25	CLXN (ENSPMRG00000017304)	RBM48 (ENSPMRG00000017298) #27	PEX1 (ENSPMRG00000017282) #28	ENSPMRG00000017271	ENSPMRG00000017264 #29	ENSPMRG00000017257	ENSPMRG00000017251 #29	ANKIB1 (ENSPMRG00000017235) #31	KRIT1 (ENSPMRG00000016844) #32	ENSPMRG00000016783	CYP51A1 (ENSPMRG00000016769) #34
tuatara	MODERN SPECIES	201										ENSSPUG00000003017	ENSSPUG00000003056	GNG11 (ENSSPUG00000003199) #17	TFPI2 (ENSSPUG00000003208) #19	CALCR (ENSSPUG00000003229) #20	VPS50 (ENSSPUG00000003243) #21	HEPACAM2 (ENSSPUG00000003257) #22	ENSSPUG00000003270	NKAIN1 (ENSSPUG00000003285)
Mammalia	ANCESTRAL SPECIES	4	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a #8	ENSGT00390000008932.c.b #9	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000159968	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Theria	ANCESTRAL SPECIES		ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000164410	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Afrotheria	ANCESTRAL SPECIES	5	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584	ENSGT00940000157640
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584	ENSGT00940000157640
Elephant	MODERN SPECIES	428	PDK4 (ENSLAFG00000011165)	ASB4 (ENSLAFG00000007164) #7	PON2 (ENSLAFG00000005043) #8	PON3 (ENSLAFG00000005041) #9	PON1 (ENSLAFG00000005035) #10	PPP1R9A (ENSLAFG00000005029) #11	SGCE (ENSLAFG00000001299) #13	CASD1 (ENSLAFG00000001296) #14	COL1A2 (ENSLAFG00000017137) #15	BET1 (ENSLAFG00000000587) #16	GNG11 (ENSLAFG00000018472) #17	GNGT1 (ENSLAFG00000030516) #18	TFPI2 (ENSLAFG00000016696) #19	CALCR (ENSLAFG00000025731) #20	VPS50 (ENSLAFG00000000877) #21	HEPACAM2 (ENSLAFG00000000874) #22	ENSLAFG00000007805	CDK6 (ENSLAFG00000018527) #23	FAM133B (ENSLAFG00000029755) #25	ENSLAFG00000030216 #26	RBM48 (ENSLAFG00000018524) #27	PEX1 (ENSLAFG00000018518) #28	GATAD1 (ENSLAFG00000021929) #29	ANKIB1 (ENSLAFG00000013273) #31	KRIT1 (ENSLAFG00000012994) #32	LRRD1 (ENSLAFG00000030816) #33	CYP51A1 (ENSLAFG00000000066) #34	ENSLAFG00000026774 #35	ENSLAFG00000000058 #35	MTERF1 (ENSLAFG00000000054) #36	FZD1 (ENSLAFG00000011817)
Hyrax	MODERN SPECIES	6606															VPS50 (ENSPCAG00000000207) #21	HEPACAM2 (ENSPCAG00000000191) #22
Tenrec	MODERN SPECIES	7853																HEPACAM2 (ENSETEG00000008710) #22
Xenarthra	ANCESTRAL SPECIES	136											ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.e ##25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Sloth	MODERN SPECIES	7014																HEPACAM2 (ENSCHOG00000007571) #22
Armadillo	MODERN SPECIES	3427											GNG11 (ENSDNOG00000049404) #17	GNGT1 (ENSDNOG00000023639) #18	TFPI2 (ENSDNOG00000011144) #19	CALCR (ENSDNOG00000006541) #20	VPS50 (ENSDNOG00000006203) #21	HEPACAM2 (ENSDNOG00000018399) #22	SAMD9L (ENSDNOG00000040042)	SAMD9 (ENSDNOG00000038892)	CDK6 (ENSDNOG00000042456) #23	ENSDNOG00000048199 ##25	ENSDNOG00000034445 #26	RBM48 (ENSDNOG00000015983) #27	PEX1 (ENSDNOG00000003433) #28	GATAD1 (ENSDNOG00000035296) #29	ENSDNOG00000045122 #30	ANKIB1 (ENSDNOG00000008391) #31	KRIT1 (ENSDNOG00000008198) #32	LRRD1 (ENSDNOG00000041070) #33	ENSDNOG00000046611	CYP51A1 (ENSDNOG00000008285) #34	ENSDNOG00000040333 #35
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Primates	ANCESTRAL SPECIES	12	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00910000147819	ENSGT00730000111097.f.a.b.a #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00910000147819	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.e #34	ENSGT00730000110871.a.b #35
Hominidae	ANCESTRAL SPECIES	11	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00910000147819	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.e #34	ENSGT00730000110871.a.b #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538.ab #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00390000004541.c.b #27	ENSGT00910000147819	ENSGT00390000004541.c.a #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.e.a #34	ENSGT00730000110871.a.b #35
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538.ab #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00390000004541.c.b #27	ENSGT00390000004541.c.a #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.e.a #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Pan	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538.ab #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00390000001627.f.b	ENSGT00950000182891.a.a.b.a.a.b	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b.a #25	ENSGT00390000004541.c.b #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.e.a #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a.m #36	ENSGT00940000162584	ENSGT00940000157640.g	ENSGT00400000022250
Chimpanzee	MODERN SPECIES	20	PPP1R9A (ENSPTRG00000047956) #11	ENSPTRG00000045048	PEG10 (ENSPTRG00000023648) #12	SGCE (ENSPTRG00000019411) #13	ENSPTRG00000048456	CASD1 (ENSPTRG00000019410) #14	COL1A2 (ENSPTRG00000019409) #15	BET1 (ENSPTRG00000052163) #16	GNG11 (ENSPTRG00000019407) #17	GNGT1 (ENSPTRG00000019406) #18	TFPI2 (ENSPTRG00000019405) #19	ENSPTRG00000050332	ENSPTRG00000043809	CALCR (ENSPTRG00000019404) #20	VPS50 (ENSPTRG00000019403) #21	HEPACAM2 (ENSPTRG00000019402) #22	SAMD9 (ENSPTRG00000028504)	CDK6 (ENSPTRG00000019400) #23	FAM133B (ENSPTRG00000045978) #25	ENSPTRG00000043160 #27	PEX1 (ENSPTRG00000019396) #28	GATAD1 (ENSPTRG00000019395) #29	ANKIB1 (ENSPTRG00000019394) #31	KRIT1 (ENSPTRG00000019393) #32	LRRD1 (ENSPTRG00000041391) #33	CYP51A1 (ENSPTRG00000019391) #34	AKAP9 (ENSPTRG00000019389) #35	MTERF1 (ENSPTRG00000019388) #36	ENSPTRG00000045634	CDK14 (ENSPTRG00000019387)	ENSPTRG00000044080
Bonobo	MODERN SPECIES	20	PON1 (ENSPPAG00000035549) #10	PPP1R9A (ENSPPAG00000041301) #11	PEG10 (ENSPPAG00000030053) #12	ENSPPAG00000041811	ENSPPAG00000040463	CASD1 (ENSPPAG00000042059) #14	COL1A2 (ENSPPAG00000042352) #15	BET1 (ENSPPAG00000042715) #16	GNG11 (ENSPPAG00000040958) #17	GNGT1 (ENSPPAG00000027641) #18	TFPI2 (ENSPPAG00000027780) #19	ENSPPAG00000034024	ENSPPAG00000007866	CALCR (ENSPPAG00000025678) #20	VPS50 (ENSPPAG00000043615) #21	ENSPPAG00000037081 #22	ENSPPAG00000034434 #23	ENSPPAG00000038105 #25	RBM48 (ENSPPAG00000038032) #27	PEX1 (ENSPPAG00000041612) #28	ANKIB1 (ENSPPAG00000030968) #31	KRIT1 (ENSPPAG00000027231) #32	LRRD1 (ENSPPAG00000014062) #33	CYP51A1 (ENSPPAG00000040915) #34	AKAP9 (ENSPPAG00000035764) #35	MTERF1 (ENSPPAG00000027361) #36	CDK14 (ENSPPAG00000042761)	ENSPPAG00000027922	GTPBP10 (ENSPPAG00000027408)	FAM237B (ENSPPAG00000008969)	CFAP69 (ENSPPAG00000029003)
Human	MODERN SPECIES	19	ASB4 (ENSG00000005981) #7	PON2 (ENSG00000105854) #8	PON3 (ENSG00000105852) #9	PON1 (ENSG00000005421) #10	PPP1R9A (ENSG00000158528) #11	PEG10 (ENSG00000242265) #12	SGCE (ENSG00000127990) #13	CASD1 (ENSG00000127995) #14	COL1A2 (ENSG00000164692) #15	BET1 (ENSG00000105829) #16	GNG11 (ENSG00000127920) #17	TFPI2 (ENSG00000105825) #19	GNGT1 (ENSG00000127928) #18	CALCR (ENSG00000004948) #20	VPS50 (ENSG00000004766) #21	HEPACAM2 (ENSG00000188175) #22	SAMD9L (ENSG00000177409)	SAMD9 (ENSG00000205413)	CDK6 (ENSG00000105810) #23	FAM133B (ENSG00000234545) #25	RBM48 (ENSG00000127993) #27	PEX1 (ENSG00000127980) #28	ERVW-1 (ENSG00000242950)	GATAD1 (ENSG00000157259) #29	ANKIB1 (ENSG00000001629) #31	KRIT1 (ENSG00000001631) #32	ENSG00000285953	LRRD1 (ENSG00000240720) #33	ENSG00000289027	ENSG00000285772	CYP51A1 (ENSG00000001630) #34
Gorilla	MODERN SPECIES	20	PPP1R9A (ENSGGOG00000040320) #11	ENSGGOG00000028270	PEG10 (ENSGGOG00000040792) #12	SGCE (ENSGGOG00000003172) #13	CASD1 (ENSGGOG00000013491) #14	ENSGGOG00000042812	COL1A2 (ENSGGOG00000006024) #15	BET1 (ENSGGOG00000002176) #16	GNG11 (ENSGGOG00000014922) #17	GNGT1 (ENSGGOG00000015062) #18	TFPI2 (ENSGGOG00000004510) #19	ENSGGOG00000026388	ENSGGOG00000022478	CALCR (ENSGGOG00000011549) #20	VPS50 (ENSGGOG00000022699) #21	HEPACAM2 (ENSGGOG00000002483) #22	SAMD9 (ENSGGOG00000026836)	CDK6 (ENSGGOG00000025851) #23	FAM133B (ENSGGOG00000044152) #25	ENSGGOG00000041366	RBM48 (ENSGGOG00000041453) #27	PEX1 (ENSGGOG00000005076) #28	GATAD1 (ENSGGOG00000023375) #29	ENSGGOG00000038174	ANKIB1 (ENSGGOG00000006851) #31	KRIT1 (ENSGGOG00000001906) #32	LRRD1 (ENSGGOG00000011266) #33	CYP51A1 (ENSGGOG00000011496) #34	AKAP9 (ENSGGOG00000007412) #35	MTERF1 (ENSGGOG00000025995) #36	FZD1 (ENSGGOG00000041639)
Orangutan	MODERN SPECIES	20	ASB4 (ENSPPYG00000017801) #7	PON2 (ENSPPYG00000017802) #8	PON3 (ENSPPYG00000017803) #9	PON1 (ENSPPYG00000017804) #10	PPP1R9A (ENSPPYG00000017805) #11	PEG10 (ENSPPYG00000029380) #12	SGCE (ENSPPYG00000017807) #13	CASD1 (ENSPPYG00000017808) #14	COL1A2 (ENSPPYG00000017809) #15	BET1 (ENSPPYG00000029381) #16	GNG11 (ENSPPYG00000017810) #17	GNGT1 (ENSPPYG00000017811) #18	TFPI2 (ENSPPYG00000017812) #19	CALCR (ENSPPYG00000017813) #20	VPS50 (ENSPPYG00000017814) #21	HEPACAM2 (ENSPPYG00000017815) #22	SAMD9L (ENSPPYG00000017816)	CDK6 (ENSPPYG00000017818) #23	FAM133B (ENSPPYG00000025825) #25	RBM48 (ENSPPYG00000017819) #27	PEX1 (ENSPPYG00000017820) #28	ERVW-1 (ENSPPYG00000039528)	GATAD1 (ENSPPYG00000017821) #29	ENSPPYG00000032872 #30	ANKIB1 (ENSPPYG00000029404) #31	KRIT1 (ENSPPYG00000017822) #32	LRRD1 (ENSPPYG00000034967) #33	CYP51A1 (ENSPPYG00000017824) #34	AKAP9 (ENSPPYG00000017825) #35	MTERF1 (ENSPPYG00000017826) #36	FZD1 (ENSPPYG00000017827)
Gibbon	MODERN SPECIES	1	PON3 (ENSNLEG00000015766) #9	PON1 (ENSNLEG00000015705) #10	PPP1R9A (ENSNLEG00000015622) #11	ENSNLEG00000030717	PEG10 (ENSNLEG00000015612) #12	SGCE (ENSNLEG00000015565) #13	ENSNLEG00000034256	CASD1 (ENSNLEG00000015519) #14	COL1A2 (ENSNLEG00000015449) #15	BET1 (ENSNLEG00000034511) #16	GNG11 (ENSNLEG00000015439) #17	GNGT1 (ENSNLEG00000015438) #18	TFPI2 (ENSNLEG00000034069) #19	CALCR (ENSNLEG00000015365) #20	VPS50 (ENSNLEG00000015349) #21	HEPACAM2 (ENSNLEG00000015343) #22	CDK6 (ENSNLEG00000015335) #23	FAM133B (ENSNLEG00000015333) #25	RBM48 (ENSNLEG00000015330) #27	PEX1 (ENSNLEG00000015298) #28	GATAD1 (ENSNLEG00000015297) #29	ANKIB1 (ENSNLEG00000015287) #31	KRIT1 (ENSNLEG00000015256) #32	LRRD1 (ENSNLEG00000015252) #33	CYP51A1 (ENSNLEG00000015250) #34	AKAP9 (ENSNLEG00000015198) #35	MTERF1 (ENSNLEG00000015192) #36	CDK14 (ENSNLEG00000015172)	CLDN12 (ENSNLEG00000015168)	ENSNLEG00000027484	GTPBP10 (ENSNLEG00000015162)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00910000147819	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Vervet Monkey	MODERN SPECIES	13	ASB4 (ENSCSAG00000012965) #7	PON2 (ENSCSAG00000012956) #8	PON3 (ENSCSAG00000012950) #9	PON1 (ENSCSAG00000012943) #10	PPP1R9A (ENSCSAG00000012919) #11	ENSCSAG00000019120 #12	SGCE (ENSCSAG00000012803) #13	CASD1 (ENSCSAG00000012791) #14	COL1A2 (ENSCSAG00000012769) #15	BET1 (ENSCSAG00000012747) #16	GNG11 (ENSCSAG00000012744) #17	GNGT1 (ENSCSAG00000012737) #18	TFPI2 (ENSCSAG00000012736) #19	CALCR (ENSCSAG00000012713) #20	VPS50 (ENSCSAG00000012652) #21	HEPACAM2 (ENSCSAG00000012630) #22	SAMD9L (ENSCSAG00000019121)	SAMD9 (ENSCSAG00000019122)	CDK6 (ENSCSAG00000012617) #23	RBM48 (ENSCSAG00000012609) #27	PEX1 (ENSCSAG00000012604) #28	GATAD1 (ENSCSAG00000012585) #29	ANKIB1 (ENSCSAG00000012579) #31	KRIT1 (ENSCSAG00000012569) #32	LRRD1 (ENSCSAG00000012560) #33	CYP51A1 (ENSCSAG00000012548) #34	AKAP9 (ENSCSAG00000012537) #35	MTERF1 (ENSCSAG00000012508) #36	FZD1 (ENSCSAG00000019123)	CDK14 (ENSCSAG00000012501)	CLDN12 (ENSCSAG00000019124)
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT00390000011417.l	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b.a #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Pig-tailed macaque	MODERN SPECIES	534	PDK4 (ENSMNEG00000042419)	ASB4 (ENSMNEG00000034621) #7	PON2 (ENSMNEG00000037066) #8	PON1 (ENSMNEG00000041009) #10	PPP1R9A (ENSMNEG00000036491) #11	PEG10 (ENSMNEG00000037924) #12	SGCE (ENSMNEG00000044499) #13	CASD1 (ENSMNEG00000043682) #14	COL1A2 (ENSMNEG00000032242) #15	BET1 (ENSMNEG00000022838) #16	GNG11 (ENSMNEG00000031924) #17	GNGT1 (ENSMNEG00000043902) #18	TFPI2 (ENSMNEG00000042271) #19	CALCR (ENSMNEG00000043493) #20	VPS50 (ENSMNEG00000041180) #21	HEPACAM2 (ENSMNEG00000044752) #22	SAMD9 (ENSMNEG00000022873)	CDK6 (ENSMNEG00000040700) #23	ENSMNEG00000038815 #25	RBM48 (ENSMNEG00000039222) #27	PEX1 (ENSMNEG00000018881) #28	GATAD1 (ENSMNEG00000034063) #29	ANKIB1 (ENSMNEG00000028340) #31	KRIT1 (ENSMNEG00000035084) #32	LRRD1 (ENSMNEG00000027250) #33	CYP51A1 (ENSMNEG00000042062) #34	AKAP9 (ENSMNEG00000043025) #35	MTERF1 (ENSMNEG00000041445) #36	ENSMNEG00000005293	CDK14 (ENSMNEG00000032203)	CLDN12 (ENSMNEG00000023407)
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT00390000011417.l	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b.a #25	ENSGT00390000004541.c #27	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.b.b.a.a.a.b.a	ENSGT00550000075032 #28	ENSGT00690000102286.a.b.l	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Rhesus	MODERN SPECIES	13	PON1 (ENSMMUG00000008011) #10	PPP1R9A (ENSMMUG00000008008) #11	ENSMMUG00000056378	ENSMMUG00000053116 ##12	ENSMMUG00000032524 #12	SGCE (ENSMMUG00000016394) #13	CASD1 (ENSMMUG00000016393) #14	COL1A2 (ENSMMUG00000039654) #15	BET1 (ENSMMUG00000000007) #16	ENSMMUG00000060571	GNG11 (ENSMMUG00000041616) #17	GNGT1 (ENSMMUG00000020579) #18	TFPI2 (ENSMMUG00000020581) #19	CALCR (ENSMMUG00000014319) #20	VPS50 (ENSMMUG00000017311) #21	HEPACAM2 (ENSMMUG00000004456) #22	ENSMMUG00000053093	SAMD9L (ENSMMUG00000020803)	SAMD9 (ENSMMUG00000000170)	CDK6 (ENSMMUG00000008698) #23	FAM133B (ENSMMUG00000019802) #25	RBM48 (ENSMMUG00000015534) #27	ENSMMUG00000060636	PEX1 (ENSMMUG00000040007) #28	ERVW-1 (ENSMMUG00000049959)	GATAD1 (ENSMMUG00000010104) #29	ANKIB1 (ENSMMUG00000005120) #31	KRIT1 (ENSMMUG00000014907) #32	LRRD1 (ENSMMUG00000038731) #33	AKAP9 (ENSMMUG00000002364) #35	MTERF1 (ENSMMUG00000015516) #36
Crab-eating macaque	MODERN SPECIES	13	PON1 (ENSMFAG00000035691) #10	ENSMFAG00000055174	ENSMFAG00000062513	PPP1R9A (ENSMFAG00000034343) #11	PEG10 (ENSMFAG00000045560) #12	SGCE (ENSMFAG00000000448) #13	CASD1 (ENSMFAG00000002018) #14	COL1A2 (ENSMFAG00000045512) #15	BET1 (ENSMFAG00000031881) #16	GNGT1 (ENSMFAG00000052651) #18	TFPI2 (ENSMFAG00000035861) #19	ENSMFAG00000002796 #20	VPS50 (ENSMFAG00000044129) #21	ENSMFAG00000002168	ENSMFAG00000061656	HEPACAM2 (ENSMFAG00000002249) #22	ENSMFAG00000002155	SAMD9 (ENSMFAG00000002163)	CDK6 (ENSMFAG00000002529) #23	ENSMFAG00000003699 #25	RBM48 (ENSMFAG00000029561) #27	ENSMFAG00000060191	PEX1 (ENSMFAG00000045505) #28	ENSMFAG00000065408	ERVW-1 (ENSMFAG00000065565)	GATAD1 (ENSMFAG00000062009) #29	ENSMFAG00000057487 #30	ENSMFAG00000056832	ANKIB1 (ENSMFAG00000040224) #31	ENSMFAG00000053045	KRIT1 (ENSMFAG00000033257) #32
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a.d #17	ENSGT00990000204321	ENSGT01100000263525.b.b.a.c #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT00390000011417.l	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00730000111097.f.b #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621.g #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Olive baboon	MODERN SPECIES	14	PON2 (ENSPANG00000005678) #8	PON1 (ENSPANG00000008433) #10	PPP1R9A (ENSPANG00000005010) #11	PEG10 (ENSPANG00000023893) #12	SGCE (ENSPANG00000008432) #13	CASD1 (ENSPANG00000005677) #14	COL1A2 (ENSPANG00000007613) #15	BET1 (ENSPANG00000009010) #16	GNG11 (ENSPANG00000037012) #17	ENSPANG00000016172	TFPI2 (ENSPANG00000007611) #19	ENSPANG00000049692	ENSPANG00000046613	CALCR (ENSPANG00000015889) #20	VPS50 (ENSPANG00000009009) #21	HEPACAM2 (ENSPANG00000021693) #22	SAMD9L (ENSPANG00000041195)	SAMD9 (ENSPANG00000011875)	CDK6 (ENSPANG00000016091) #23	ENSPANG00000035106 #25	RBM48 (ENSPANG00000020591) #27	PEX1 (ENSPANG00000021187) #28	GATAD1 (ENSPANG00000006522) #29	ANKIB1 (ENSPANG00000017286) #31	KRIT1 (ENSPANG00000024548) #32	LRRD1 (ENSPANG00000024550) #33	CYP51A1 (ENSPANG00000010214) #34	AKAP9 (ENSPANG00000000841) #35	MTERF1 (ENSPANG00000007445) #36	FZD1 (ENSPANG00000002491)	CDK14 (ENSPANG00000022338)
Cercopithecinae_d	ANCESTRAL SPECIES	10	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a.c #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT00390000011417.l	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00910000147819	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621.g #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Sooty mangabey	MODERN SPECIES	185	PON2 (ENSCATG00000030239) #8	PON3 (ENSCATG00000033359) #9	ENSCATG00000039956	PON1 (ENSCATG00000034334) #10	PPP1R9A (ENSCATG00000039595) #11	PEG10 (ENSCATG00000012637) #12	SGCE (ENSCATG00000003182) #13	CASD1 (ENSCATG00000035733) #14	COL1A2 (ENSCATG00000031960) #15	BET1 (ENSCATG00000030850) #16	GNG11 (ENSCATG00000003334) #17	GNGT1 (ENSCATG00000034487) #18	TFPI2 (ENSCATG00000029797) #19	CALCR (ENSCATG00000022030) #20	VPS50 (ENSCATG00000036413) #21	HEPACAM2 (ENSCATG00000044377) #22
Drill	MODERN SPECIES	1266													CALCR (ENSMLEG00000017214) #20	VPS50 (ENSMLEG00000035845) #21	ENSMLEG00000034122	HEPACAM2 (ENSMLEG00000033837) #22	SAMD9 (ENSMLEG00000027432)	CDK6 (ENSMLEG00000036979) #23	ENSMLEG00000037559 #25	ENSMLEG00000019422	RBM48 (ENSMLEG00000033995) #27	PEX1 (ENSMLEG00000028191) #28	ENSMLEG00000015921 #29	ENSMLEG00000038773 #31	SERHL2 (ENSMLEG00000035634)	RRP7A (ENSMLEG00000040230)
Rhinopithecus	ANCESTRAL SPECIES	288													ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT00390000011417.l	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.b.b #25	ENSGT00910000147819	ENSGT00730000111097.f.a.b.a.b #25	ENSGT00390000004541.c #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Golden snub-nosed monkey	MODERN SPECIES	2824													CALCR (ENSRROG00000044425) #20	VPS50 (ENSRROG00000029521) #21	ENSRROG00000035551	HEPACAM2 (ENSRROG00000041137) #22
Black snub-nosed monkey	MODERN SPECIES	312													CALCR (ENSRBIG00000038992) #20	VPS50 (ENSRBIG00000042984) #21	ENSRBIG00000044417	HEPACAM2 (ENSRBIG00000030210) #22	SAMD9L (ENSRBIG00000037545)	CDK6 (ENSRBIG00000044436) #23	ENSRBIG00000031395 #25	ENSRBIG00000031758	RBM48 (ENSRBIG00000011170) #27	PEX1 (ENSRBIG00000029159) #28	GATAD1 (ENSRBIG00000042405) #29	ENSRBIG00000034124 #30	ANKIB1 (ENSRBIG00000022408) #31	KRIT1 (ENSRBIG00000032467) #32
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.a #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.g #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584	ENSGT00940000157640	ENSGT00400000022250	ENSGT00940000155589
Cebidae	ANCESTRAL SPECIES	9	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.a #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.g #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584	ENSGT00940000157640	ENSGT00400000022250	ENSGT00940000155589
Marmoset	MODERN SPECIES	20	PON2 (ENSCJAG00000013295) #8	PON3 (ENSCJAG00000045831) #9	PPP1R9A (ENSCJAG00000013400) #11	ENSCJAG00000062735	ENSCJAG00000084221	PEG10 (ENSCJAG00000033086) #12	SGCE (ENSCJAG00000013426) #13	CASD1 (ENSCJAG00000013493) #14	COL1A2 (ENSCJAG00000013547) #15	ENSCJAG00000039175	ENSCJAG00000070690 #17	GNGT1 (ENSCJAG00000084556) #18	TFPI2 (ENSCJAG00000013741) #19	CALCR (ENSCJAG00000013758) #20	VPS50 (ENSCJAG00000013774) #21	HEPACAM2 (ENSCJAG00000013864) #22	ENSCJAG00000066447	ENSCJAG00000073782	ENSCJAG00000075520	CDK6 (ENSCJAG00000043437) #23	ENSCJAG00000039959 #25	RBM48 (ENSCJAG00000040481) #27	PEX1 (ENSCJAG00000013927) #28	GATAD1 (ENSCJAG00000079684) #29	ANKIB1 (ENSCJAG00000013964) #31	KRIT1 (ENSCJAG00000014000) #32	LRRD1 (ENSCJAG00000014016) #33	CYP51A1 (ENSCJAG00000014019) #34	AKAP9 (ENSCJAG00000014035) #35	MTERF1 (ENSCJAG00000014169) #36	ENSCJAG00000023040
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000157957 #23	ENSGT00730000111097.f.a.a #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026.g #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000157640	ENSGT00400000022250	ENSGT00940000155589	ENSGT00390000014274
Capuchin	MODERN SPECIES	37	PON2 (ENSCCAG00000032651) #8	PON3 (ENSCCAG00000027557) #9	PON1 (ENSCCAG00000037019) #10	PPP1R9A (ENSCCAG00000029366) #11	PEG10 (ENSCCAG00000022728) #12	SGCE (ENSCCAG00000034233) #13	ENSCCAG00000026906	CASD1 (ENSCCAG00000020486) #14	COL1A2 (ENSCCAG00000024785) #15	BET1 (ENSCCAG00000034375) #16	GNG11 (ENSCCAG00000035000) #17	GNGT1 (ENSCCAG00000027840) #18	TFPI2 (ENSCCAG00000025965) #19	CALCR (ENSCCAG00000028932) #20	VPS50 (ENSCCAG00000019120) #21	HEPACAM2 (ENSCCAG00000027204) #22
Bolivian squirrel monkey	MODERN SPECIES	44	PON2 (ENSSBOG00000029443) #8	PON3 (ENSSBOG00000011528) #9	PON1 (ENSSBOG00000035653) #10	PPP1R9A (ENSSBOG00000022677) #11	PEG10 (ENSSBOG00000035518) #12	SGCE (ENSSBOG00000034386) #13	ENSSBOG00000013837	CASD1 (ENSSBOG00000022509) #14	COL1A2 (ENSSBOG00000017526) #15	BET1 (ENSSBOG00000020610) #16	GNG11 (ENSSBOG00000034498) #17	GNGT1 (ENSSBOG00000030878) #18	TFPI2 (ENSSBOG00000023457) #19	CALCR (ENSSBOG00000033645) #20	VPS50 (ENSSBOG00000035255) #21	HEPACAM2 (ENSSBOG00000035736) #22	ENSSBOG00000021296	CDK6 (ENSSBOG00000034944) #23	ENSSBOG00000030993 #25	RBM48 (ENSSBOG00000021834) #27	PEX1 (ENSSBOG00000021711) #28	ANKIB1 (ENSSBOG00000023297) #31	KRIT1 (ENSSBOG00000035485) #32	LRRD1 (ENSSBOG00000034443) #33	CYP51A1 (ENSSBOG00000035232) #34	AKAP9 (ENSSBOG00000022508) #35	MTERF1 (ENSSBOG00000034146) #36	CDK14 (ENSSBOG00000033241)	ENSSBOG00000018560	GTPBP10 (ENSSBOG00000034053)	CFAP69 (ENSSBOG00000028540)
Mas night monkey	MODERN SPECIES	776	PON2 (ENSANAG00000031707) #8	PON3 (ENSANAG00000023332) #9	PON1 (ENSANAG00000032641) #10	PPP1R9A (ENSANAG00000005419) #11	PEG10 (ENSANAG00000021637) #12	SGCE (ENSANAG00000021843) #13	ENSANAG00000026128	CASD1 (ENSANAG00000022391) #14	COL1A2 (ENSANAG00000027829) #15	ENSANAG00000020263 #16	GNG11 (ENSANAG00000025570) #17	GNGT1 (ENSANAG00000026204) #18	TFPI2 (ENSANAG00000035329) #19	CALCR (ENSANAG00000020655) #20	VPS50 (ENSANAG00000030711) #21	HEPACAM2 (ENSANAG00000021636) #22	CDK6 (ENSANAG00000024969) #23	ENSANAG00000038305 #25	RBM48 (ENSANAG00000033815) #27	PEX1 (ENSANAG00000032378) #28	GATAD1 (ENSANAG00000037321) #29	ANKIB1 (ENSANAG00000038408) #31	KRIT1 (ENSANAG00000034244) #32	LRRD1 (ENSANAG00000029885) #33	CYP51A1 (ENSANAG00000036665) #34	AKAP9 (ENSANAG00000035864) #35	MTERF1 (ENSANAG00000022640) #36	CDK14 (ENSANAG00000034381)	CLDN12 (ENSANAG00000019188)	GTPBP10 (ENSANAG00000020267)	CFAP69 (ENSANAG00000026248)
Tarsier	MODERN SPECIES	5522														CALCR (ENSTSYG00000007311) #20	VPS50 (ENSTSYG00000009910) #21	HEPACAM2 (ENSTSYG00000009901) #22	ENSTSYG00000006561
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Mouse lemur	MODERN SPECIES	2	ASB4 (ENSMICG00000005750) #7	PON2 (ENSMICG00000026757) #8	PON3 (ENSMICG00000005738) #9	PON1 (ENSMICG00000005724) #10	PPP1R9A (ENSMICG00000026651) #11	PEG10 (ENSMICG00000001469) #12	SGCE (ENSMICG00000001463) #13	CASD1 (ENSMICG00000034673) #14	COL1A2 (ENSMICG00000008483) #15	BET1 (ENSMICG00000043268) #16	GNG11 (ENSMICG00000044959) #17	GNGT1 (ENSMICG00000014546) #18	TFPI2 (ENSMICG00000032673) #19	CALCR (ENSMICG00000002792) #20	VPS50 (ENSMICG00000012428) #21	HEPACAM2 (ENSMICG00000012423) #22	CDK6 (ENSMICG00000004219) #23	ENSMICG00000035587 #24	FAM133B (ENSMICG00000029896) #25	ENSMICG00000041777 #26	ENSMICG00000034619 #27	PEX1 (ENSMICG00000015105) #28	GATAD1 (ENSMICG00000033903) #29	ENSMICG00000036471 #30	ANKIB1 (ENSMICG00000015075) #31	KRIT1 (ENSMICG00000032533) #32	LRRD1 (ENSMICG00000037045) #33	CYP51A1 (ENSMICG00000002486) #34	AKAP9 (ENSMICG00000011654) #35	MTERF1 (ENSMICG00000046314) #36	ENSMICG00000026970 #37
Lemuriformes_a	ANCESTRAL SPECIES	91	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Greater bamboo lemur	MODERN SPECIES	91	ASB4 (ENSPSMG00000009059) #7	PON2 (ENSPSMG00000009150) #8	PON3 (ENSPSMG00000009234) #9	PON1 (ENSPSMG00000009242) #10	PPP1R9A (ENSPSMG00000009393) #11	PEG10 (ENSPSMG00000009482) #12	SGCE (ENSPSMG00000009934) #13	CASD1 (ENSPSMG00000010248) #14	COL1A2 (ENSPSMG00000010279) #15	BET1 (ENSPSMG00000010301) #16	GNG11 (ENSPSMG00000010307) #17	GNGT1 (ENSPSMG00000010319) #18	TFPI2 (ENSPSMG00000010326) #19	CALCR (ENSPSMG00000010414) #20	VPS50 (ENSPSMG00000010744) #21	HEPACAM2 (ENSPSMG00000010929) #22	SAMD9 (ENSPSMG00000010934)	ENSPSMG00000010943	CDK6 (ENSPSMG00000010966) #23	FAM133B (ENSPSMG00000011002) #25	ENSPSMG00000011026 #26	RBM48 (ENSPSMG00000011043) #27	PEX1 (ENSPSMG00000011155) #28	GATAD1 (ENSPSMG00000011215) #29	ENSPSMG00000011221 #30	ANKIB1 (ENSPSMG00000011266) #31	KRIT1 (ENSPSMG00000011362) #32	LRRD1 (ENSPSMG00000011390) #33	CYP51A1 (ENSPSMG00000011408) #34	AKAP9 (ENSPSMG00000011881) #35	MTERF1 (ENSPSMG00000012061) #36
Coquerels sifaka	MODERN SPECIES	83	ASB4 (ENSPCOG00000024006) #7	PON2 (ENSPCOG00000023699) #8	PON3 (ENSPCOG00000026838) #9	PON1 (ENSPCOG00000018614) #10	PPP1R9A (ENSPCOG00000026221) #11	ENSPCOG00000023235	PEG10 (ENSPCOG00000017433) #12	SGCE (ENSPCOG00000024844) #13	ENSPCOG00000020996 #14	ENSPCOG00000014533 #14	COL1A2 (ENSPCOG00000007815) #15	GNG11 (ENSPCOG00000022689) #17	TFPI2 (ENSPCOG00000018997) #19	CALCR (ENSPCOG00000023981) #20	VPS50 (ENSPCOG00000023401) #21	HEPACAM2 (ENSPCOG00000006890) #22	ENSPCOG00000010245 ##37
Bushbaby	MODERN SPECIES	120	ASB4 (ENSOGAG00000008468) #7	PON2 (ENSOGAG00000008461) #8	PON3 (ENSOGAG00000008457) #9	PON1 (ENSOGAG00000008453) #10	PPP1R9A (ENSOGAG00000008450) #11	ENSOGAG00000031169 #12	SGCE (ENSOGAG00000012026) #13	CASD1 (ENSOGAG00000012017) #14	COL1A2 (ENSOGAG00000005970) #15	BET1 (ENSOGAG00000005067) #16	GNG11 (ENSOGAG00000005066) #17	GNGT1 (ENSOGAG00000005065) #18	TFPI2 (ENSOGAG00000031399) #19	CALCR (ENSOGAG00000000282) #20	VPS50 (ENSOGAG00000000281) #21	HEPACAM2 (ENSOGAG00000000280) #22	SAMD9 (ENSOGAG00000027260)	CDK6 (ENSOGAG00000034774) #23	RBM48 (ENSOGAG00000010843) #27	PEX1 (ENSOGAG00000010835) #28	GATAD1 (ENSOGAG00000010833) #29	ENSOGAG00000031279 #30	ANKIB1 (ENSOGAG00000010828) #31	KRIT1 (ENSOGAG00000010823) #32	CYP51A1 (ENSOGAG00000001380) #34	LRRD1 (ENSOGAG00000001383) #33	AKAP9 (ENSOGAG00000001379) #35	MTERF1 (ENSOGAG00000001378) #36	FZD1 (ENSOGAG00000026848)	CDK14 (ENSOGAG00000001681)	CLDN12 (ENSOGAG00000010571)
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Glires	ANCESTRAL SPECIES	18	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Rodentia	ANCESTRAL SPECIES	12	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b.c #35	ENSGT00530000063817.a #36
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34
Chinese hamster chok1gshd	MODERN SPECIES	54	Pon2 (ENSCGRG00001017926) #8	Pon3 (ENSCGRG00001017513) #9	Pon1 (ENSCGRG00001017580) #10	ENSCGRG00001022001 #11	ENSCGRG00001012942 #11	ENSCGRG00001010002 #12	Sgce (ENSCGRG00001021015) #13	Casd1 (ENSCGRG00001001133) #14	Col1a2 (ENSCGRG00001008152) #15	Bet1 (ENSCGRG00001014879)	Gng11 (ENSCGRG00001014889) #17	Gngt1 (ENSCGRG00001016190) #18	Tfpi2 (ENSCGRG00001019883) #19	Calcr (ENSCGRG00001012972) #20	Vps50 (ENSCGRG00001017930) #21	Hepacam2 (ENSCGRG00001023099) #22	ENSCGRG00001003461	ENSCGRG00001006338	ENSCGRG00001004929	ENSCGRG00001002207	Cdk6 (ENSCGRG00001004424) #23	Fam133b (ENSCGRG00001015870) #25	ENSCGRG00001021494 #28	ENSCGRG00001007347	Gatad1 (ENSCGRG00001009429) #29	Tmbim7 (ENSCGRG00001011095) #30	Ankib1 (ENSCGRG00001018076) #31	Rbm48 (ENSCGRG00001016551) #27	Krit1 (ENSCGRG00001001397) #32	Lrrd1 (ENSCGRG00001013802) #33	Cyp51 (ENSCGRG00001017340) #34
Golden Hamster	MODERN SPECIES	756	Asb4 (ENSMAUG00000017354) #7	Pon2 (ENSMAUG00000019926) #8	Pon3 (ENSMAUG00000007231) #9	Pon1 (ENSMAUG00000016513) #10	Ppp1r9a (ENSMAUG00000017217) #11	Peg10 (ENSMAUG00000018656) #12	Sgce (ENSMAUG00000022202) #13	Casd1 (ENSMAUG00000017786) #14	Col1a2 (ENSMAUG00000018627) #15	Bet1 (ENSMAUG00000021863)	Gng11 (ENSMAUG00000020554) #17	Gngt1 (ENSMAUG00000002071) #18	Tfpi2 (ENSMAUG00000011684) #19	Calcr (ENSMAUG00000001795) #20	Vps50 (ENSMAUG00000013902) #21	Hepacam2 (ENSMAUG00000020480) #22
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b.c #35	ENSGT00730000110871.a.b.d #35
Prairie vole	MODERN SPECIES	350	Asb4 (ENSMOCG00000000254) #7	Pon2 (ENSMOCG00000013410) #8	Pon3 (ENSMOCG00000013174) #9	Pon1 (ENSMOCG00000007036) #10	Ppp1r9a (ENSMOCG00000010035) #11	Peg10 (ENSMOCG00000003210) #12	Sgce (ENSMOCG00000011802) #13	Casd1 (ENSMOCG00000020135) #14	Col1a2 (ENSMOCG00000009504) #15	ENSMOCG00000013219	Gng11 (ENSMOCG00000015486) #17	Gngt1 (ENSMOCG00000010267) #18	Tfpi2 (ENSMOCG00000000529) #19	Calcr (ENSMOCG00000020811) #20	Vps50 (ENSMOCG00000012908) #21	Hepacam2 (ENSMOCG00000011352) #22
Northern American deer mouse	MODERN SPECIES	16	Pon3 (ENSPEMG00000029851) #9	Pon1 (ENSPEMG00000021811) #10	Ppp1r9a (ENSPEMG00000023259) #11	ENSPEMG00000031065	Peg10 (ENSPEMG00000028270) #12	Sgce (ENSPEMG00000012336) #13	Casd1 (ENSPEMG00000014646) #14	Col1a2 (ENSPEMG00000011603) #15	Bet1 (ENSPEMG00000027371)	Gng11 (ENSPEMG00000027050) #17	Gngt1 (ENSPEMG00000027684) #18	Tfpi2 (ENSPEMG00000010362) #19	Calcr (ENSPEMG00000014162) #20	ENSPEMG00000029685	Vps50 (ENSPEMG00000002198) #21	Hepacam2 (ENSPEMG00000010816) #22	ENSPEMG00000016169	ENSPEMG00000025166	Cdk6 (ENSPEMG00000015977) #23	Fam133b (ENSPEMG00000010640) #25	1700109H08Rik (ENSPEMG00000010299) #26	Rbm48 (ENSPEMG00000008284) #27	Pex1 (ENSPEMG00000014258) #28	ENSPEMG00000026596 #29	Tmbim7 (ENSPEMG00000016377) #30	Ankib1 (ENSPEMG00000016309) #31	Krit1 (ENSPEMG00000010538) #32	Lrrd1 (ENSPEMG00000015593) #33	ENSPEMG00000028372	Cyp51 (ENSPEMG00000011646) #34	ENSPEMG00000030769 #35
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33
Mus	ANCESTRAL SPECIES	20	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b
Mouse	MODERN SPECIES	15	Asb4 (ENSMUSG00000042607) #7	Pon2 (ENSMUSG00000032667) #8	Pon3 (ENSMUSG00000029759) #9	Pon1 (ENSMUSG00000002588) #10	Ppp1r9a (ENSMUSG00000032827) #11	Peg10 (ENSMUSG00000092035) #12	Sgce (ENSMUSG00000004631) #13	Casd1 (ENSMUSG00000015189) #14	Col1a2 (ENSMUSG00000029661) #15	Bet1 (ENSMUSG00000032757)	Gng11 (ENSMUSG00000032766) #17	Gngt1 (ENSMUSG00000029663) #18	Tfpi2 (ENSMUSG00000029664) #19	Calcr (ENSMUSG00000023964) #20	Vps50 (ENSMUSG00000001376) #21	Hepacam2 (ENSMUSG00000044156) #22	Samd9l (ENSMUSG00000047735)	Vmn1r261 (ENSMUSG00000106893)
Mus_C	ANCESTRAL SPECIES	19	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b
spretus	MODERN SPECIES	15	Asb4 (MGP_SPRETEiJ_G0029083) #7	Pon2 (MGP_SPRETEiJ_G0029082) #8	MGP_SPRETEiJ_G0029081 #9	Pon1 (MGP_SPRETEiJ_G0029080) #10	Ppp1r9a (MGP_SPRETEiJ_G0029079) #11	MGP_SPRETEiJ_G0029078 ##12	Sgce (MGP_SPRETEiJ_G0029077) #13	Casd1 (MGP_SPRETEiJ_G0029076) #14	Col1a2 (MGP_SPRETEiJ_G0029075) #15	Bet1 (MGP_SPRETEiJ_G0029074)	Gng11 (MGP_SPRETEiJ_G0029073) #17	Gngt1 (MGP_SPRETEiJ_G0029072) #18	Tfpi2 (MGP_SPRETEiJ_G0029071) #19	Calcr (MGP_SPRETEiJ_G0029070) #20	Vps50 (MGP_SPRETEiJ_G0029069) #21	Hepacam2 (MGP_SPRETEiJ_G0029068) #22	Samd9l (MGP_SPRETEiJ_G0029067)
Steppe mouse	MODERN SPECIES	228															ENSMSIG00000001586 #21	Hepacam2 (ENSMSIG00000001540) #22	Samd9l (ENSMSIG00000001529)
Ryukyu mouse	MODERN SPECIES	15	Asb4 (MGP_CAROLIEiJ_G0028083) #7	Pon2 (MGP_CAROLIEiJ_G0028082) #8	Pon3 (MGP_CAROLIEiJ_G0028081) #9	Pon1 (MGP_CAROLIEiJ_G0028080) #10	Ppp1r9a (MGP_CAROLIEiJ_G0028079) #11	MGP_CAROLIEiJ_G0028078 #12	Sgce (MGP_CAROLIEiJ_G0028077) #13	Casd1 (MGP_CAROLIEiJ_G0028076) #14	Col1a2 (MGP_CAROLIEiJ_G0028075) #15	Bet1 (MGP_CAROLIEiJ_G0028074)	Gng11 (MGP_CAROLIEiJ_G0028073) #17	Gngt1 (MGP_CAROLIEiJ_G0028072) #18	Tfpi2 (MGP_CAROLIEiJ_G0028071) #19	Calcr (MGP_CAROLIEiJ_G0028070) #20	Vps50 (MGP_CAROLIEiJ_G0028069) #21	Hepacam2 (MGP_CAROLIEiJ_G0028068) #22
Shrew mouse	MODERN SPECIES	11	Asb4 (MGP_PahariEiJ_G0021839) #7	Pon2 (MGP_PahariEiJ_G0021838) #8	Pon3 (MGP_PahariEiJ_G0021837) #9	Pon1 (MGP_PahariEiJ_G0021836) #10	Ppp1r9a (MGP_PahariEiJ_G0021835) #11	MGP_PahariEiJ_G0021834 ##12	Sgce (MGP_PahariEiJ_G0021833) #13	Casd1 (MGP_PahariEiJ_G0021832) #14	Col1a2 (MGP_PahariEiJ_G0021831) #15	Bet1 (MGP_PahariEiJ_G0021830)	Gng11 (MGP_PahariEiJ_G0021829) #17	Gngt1 (MGP_PahariEiJ_G0021828) #18	Tfpi2 (MGP_PahariEiJ_G0021827) #19	Calcr (MGP_PahariEiJ_G0021826) #20	Vps50 (MGP_PahariEiJ_G0021825) #21	Hepacam2 (MGP_PahariEiJ_G0021824) #22	Samd9l (MGP_PahariEiJ_G0021823)	MGP_PahariEiJ_G0021822	Il6 (MGP_PahariEiJ_G0021821)	MGP_PahariEiJ_G0021820	MGP_PahariEiJ_G0021819	Ube3c (MGP_PahariEiJ_G0021818)	Mnx1 (MGP_PahariEiJ_G0021817)	MGP_PahariEiJ_G0021816	Lmbr1 (MGP_PahariEiJ_G0021815)	Rnf32 (MGP_PahariEiJ_G0021814)	Shh (MGP_PahariEiJ_G0021813)	Rbm33 (MGP_PahariEiJ_G0021812)	MGP_PahariEiJ_G0021811	En2 (MGP_PahariEiJ_G0021810)	Insig1 (MGP_PahariEiJ_G0021809)
Rat	MODERN SPECIES	14	Asb4 (ENSRNOG00000009197) #7	Pon2 (ENSRNOG00000009112) #8	Pon3 (ENSRNOG00000009096) #9	Pon1 (ENSRNOG00000008902) #10	Ppp1r9a (ENSRNOG00000008869) #11	Peg10 (ENSRNOG00000066798) #12	Sgce (ENSRNOG00000046905) #13	Casd1 (ENSRNOG00000047453) #14	Col1a2 (ENSRNOG00000011292) #15	Bet1 (ENSRNOG00000011008)	Gng11 (ENSRNOG00000050469) #17	Gngt1 (ENSRNOG00000010546) #18	Tfpi2 (ENSRNOG00000010513) #19	Calcr (ENSRNOG00000010053) #20	Vps50 (ENSRNOG00000009894) #21	Hepacam2 (ENSRNOG00000009711) #22	Samd9l (ENSRNOG00000063679)	LOC120102230 (ENSRNOG00000065666)	Samd9 (ENSRNOG00000052444)	ENSRNOG00000063850	Golga3-ps1 (ENSRNOG00000061046)	ENSRNOG00000070481	ENSRNOG00000069815	Cdk6 (ENSRNOG00000009258) #23	Fam133b (ENSRNOG00000009163) #25	LOC500007 (ENSRNOG00000009135) #26	Rbm48 (ENSRNOG00000008980) #27	Pex1 (ENSRNOG00000025991) #28	Gatad1 (ENSRNOG00000008613) #29	Tmbim7 (ENSRNOG00000008585) #30	Ankib1 (ENSRNOG00000005502) #31
Upper Galilee mountains blind mole rat	MODERN SPECIES	1798	Pon1 (ENSNGAG00000023834) #10	ENSNGAG00000023210 #11	ENSNGAG00000014240 #11	ENSNGAG00000004615	Peg10 (ENSNGAG00000004018) #12	Sgce (ENSNGAG00000021165) #13	ENSNGAG00000001391 #14	ENSNGAG00000023372 #14	Col1a2 (ENSNGAG00000016057) #15	ENSNGAG00000018157 #16	ENSNGAG00000010457 #17	Gngt1 (ENSNGAG00000018170) #18	Tfpi2 (ENSNGAG00000022002) #19	Calcr (ENSNGAG00000022759) #20	Vps50 (ENSNGAG00000021548) #21	Hepacam2 (ENSNGAG00000012448) #22	ENSNGAG00000024174	Cdk6 (ENSNGAG00000019445) #23	Fam133b (ENSNGAG00000021412) #25	ENSNGAG00000023310 #27	Pex1 (ENSNGAG00000022685) #28	ENSNGAG00000018462 #29	Tmbim7 (ENSNGAG00000022696) #30	Ankib1 (ENSNGAG00000023377) #31	Krit1 (ENSNGAG00000017207) #32	ENSNGAG00000013213	Lrrd1 (ENSNGAG00000020640) #33	ENSNGAG00000023074	Cyp51 (ENSNGAG00000023930) #34	Akap9 (ENSNGAG00000024136) #35	ENSNGAG00000014383 #36
Lesser Egyptian jerboa	MODERN SPECIES	59	Pon2 (ENSJJAG00000014340) #8	Pon3 (ENSJJAG00000014617) #9	Pon1 (ENSJJAG00000019417) #10	Ppp1r9a (ENSJJAG00000014236) #11	ENSJJAG00000004763	Peg10 (ENSJJAG00000011361) #12	Sgce (ENSJJAG00000017688) #13	Casd1 (ENSJJAG00000013202) #14	Col1a2 (ENSJJAG00000022237) #15	ENSJJAG00000024246	Bet1 (ENSJJAG00000021408)	Gng11 (ENSJJAG00000016011) #17	Gngt1 (ENSJJAG00000024003) #18	Calcr (ENSJJAG00000014172) #20	Vps50 (ENSJJAG00000022304) #21	Hepacam2 (ENSJJAG00000016947) #22	Cdk6 (ENSJJAG00000008543) #23	Fam133b (ENSJJAG00000021611) #25	Rbm48 (ENSJJAG00000000796) #27	Pex1 (ENSJJAG00000023996) #28	ENSJJAG00000023249	ENSJJAG00000021746 #29	ENSJJAG00000021918 #29	Tmbim7 (ENSJJAG00000023877) #30	Ankib1 (ENSJJAG00000004011) #31	Krit1 (ENSJJAG00000022193) #32	Lrrd1 (ENSJJAG00000015021) #33	Cyp51 (ENSJJAG00000022096) #34	Akap9 (ENSJJAG00000012874) #35	ENSJJAG00000011811 #36	ENSJJAG00000007047
Kangaroo rat	MODERN SPECIES	409									Col1a2 (ENSDORG00000003027) #15	ENSDORG00000026453 #16	Gng11 (ENSDORG00000024098) #17	Gngt1 (ENSDORG00000009837) #18	ENSDORG00000009839 #19	Calcr (ENSDORG00000004441) #20	Vps50 (ENSDORG00000000249) #21	Hepacam2 (ENSDORG00000000246) #22	Samd9l (ENSDORG00000023214)	Cdk6 (ENSDORG00000023885) #23	ENSDORG00000026708	ENSDORG00000026255 #25	1700109H08Rik (ENSDORG00000028925) #26	ENSDORG00000005900 #27	ENSDORG00000024638 #28	ENSDORG00000025025	ENSDORG00000023294 #29	ENSDORG00000028009 #30	Ankib1 (ENSDORG00000012252) #31	Krit1 (ENSDORG00000012249) #32	Lrrd1 (ENSDORG00000023933) #33	ENSDORG00000009661 #34	ENSDORG00000014938 #34
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Marmotini	ANCESTRAL SPECIES	35	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000154295.t	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Alpin marmot	MODERN SPECIES	127														CALCR (ENSMMMG00000020734) #20	VPS50 (ENSMMMG00000020701) #21	HEPACAM2 (ENSMMMG00000020689) #22	ENSMMMG00000020680	SAMD9L (ENSMMMG00000020671)	SAMD9 (ENSMMMG00000020668)	CDK6 (ENSMMMG00000020641) #23	FAM133B (ENSMMMG00000020605) #25	ENSMMMG00000020594 #26	RBM48 (ENSMMMG00000020567) #27	PEX1 (ENSMMMG00000020511) #28	ENSMMMG00000020506 #29	ENSMMMG00000020494 #30	ANKIB1 (ENSMMMG00000020468) #31	KRIT1 (ENSMMMG00000020443) #32	ENSMMMG00000020440	ENSMMMG00000020439 #33	CYP51A1 (ENSMMMG00000020432) #34
Marmotini_b	ANCESTRAL SPECIES	66	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000154295.t	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Squirrel	MODERN SPECIES	403											GNG11 (ENSSTOG00000009667) #17	GNGT1 (ENSSTOG00000009664) #18	TFPI2 (ENSSTOG00000027438) #19	CALCR (ENSSTOG00000011852) #20	VPS50 (ENSSTOG00000011827) #21	HEPACAM2 (ENSSTOG00000011821) #22	ENSSTOG00000024928	SAMD9L (ENSSTOG00000029072)	CDK6 (ENSSTOG00000021728) #23	FAM133B (ENSSTOG00000028195) #25	ENSSTOG00000028513 #26	RBM48 (ENSSTOG00000001386) #27	PEX1 (ENSSTOG00000001365) #28	ENSSTOG00000033661 #29	ENSSTOG00000001360 #29	ENSSTOG00000034681 #30	ENSSTOG00000000720 #31
Arctic ground squirrel	MODERN SPECIES	91	ASB4 (ENSUPAG00010018314) #7	PON2 (ENSUPAG00010018303) #8	PON3 (ENSUPAG00010018287) #9	PON1 (ENSUPAG00010018258) #10	PPP1R9A (ENSUPAG00010015293) #11	ENSUPAG00010015260 #12	SGCE (ENSUPAG00010014956) #13	CASD1 (ENSUPAG00010014912) #14	COL1A2 (ENSUPAG00010014832) #15	BET1 (ENSUPAG00010014824) #16	GNG11 (ENSUPAG00010014820) #17	GNGT1 (ENSUPAG00010014816) #18	TFPI2 (ENSUPAG00010014805) #19	CALCR (ENSUPAG00010014497) #20	VPS50 (ENSUPAG00010014411) #21	HEPACAM2 (ENSUPAG00010014394) #22	ENSUPAG00010014382	SAMD9L (ENSUPAG00010014375)	SAMD9 (ENSUPAG00010014370)	CDK6 (ENSUPAG00010014338) #23	FAM133B (ENSUPAG00010014318) #25
Eurasian red squirrel	MODERN SPECIES	17	PON1 (ENSSVLG00005006959) #10	PPP1R9A (ENSSVLG00005007147) #11	ENSSVLG00005007478	ENSSVLG00005007534	PEG10 (ENSSVLG00005007575) #12	SGCE (ENSSVLG00005007757) #13	CASD1 (ENSSVLG00005008122) #14	COL1A2 (ENSSVLG00005008201) #15	BET1 (ENSSVLG00005008724) #16	GNG11 (ENSSVLG00005008775) #17	GNGT1 (ENSSVLG00005008796) #18	TFPI2 (ENSSVLG00005008817) #19	ENSSVLG00005008855	CALCR (ENSSVLG00005008900) #20	VPS50 (ENSSVLG00005009096) #21	HEPACAM2 (ENSSVLG00005009314) #22	SAMD9L (ENSSVLG00005009536)	ENSSVLG00005009550	SAMD9 (ENSSVLG00005009567)	CDK6 (ENSSVLG00005009594) #23	ENSSVLG00005009641 #25	ENSSVLG00005009771 #26	RBM48 (ENSSVLG00005009826) #27	PEX1 (ENSSVLG00005009996) #28	GATAD1 (ENSSVLG00005010454) #29	ENSSVLG00005010488 #30	ANKIB1 (ENSSVLG00005010616) #31	KRIT1 (ENSSVLG00005010706) #32	LRRD1 (ENSSVLG00005011038) #33	CYP51A1 (ENSSVLG00005011134) #34	ENSSVLG00005011211 #35
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Hystricomorpha_a	ANCESTRAL SPECIES	43	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Guinea pig	MODERN SPECIES	11	PON2 (ENSCPOG00000007257) #8	PON3 (ENSCPOG00000039258) #9	PON1 (ENSCPOG00000037806) #10	ENSCPOG00000010259	PPP1R9A (ENSCPOG00000011567) #11	ENSCPOG00000037165 ##12	SGCE (ENSCPOG00000010672) #13	CASD1 (ENSCPOG00000033243) #14	COL1A2 (ENSCPOG00000010646) #15	BET1 (ENSCPOG00000034022) #16	GNG11 (ENSCPOG00000032838) #17	GNGT1 (ENSCPOG00000008429) #18	TFPI2 (ENSCPOG00000019703) #19	CALCR (ENSCPOG00000006940) #20	VPS50 (ENSCPOG00000031577) #21	HEPACAM2 (ENSCPOG00000004661) #22	SAMD9L (ENSCPOG00000015564)	SAMD9 (ENSCPOG00000040647)	CDK6 (ENSCPOG00000030665) #23	FAM133B (ENSCPOG00000007584) #25	ENSCPOG00000034236 #26	RBM48 (ENSCPOG00000007376) #27	PEX1 (ENSCPOG00000007366) #28	ENSCPOG00000035569 #29	ENSCPOG00000027317 #29	ENSCPOG00000037153 #30	ENSCPOG00000033133	ANKIB1 (ENSCPOG00000004121) #31	KRIT1 (ENSCPOG00000010013) #32	LRRD1 (ENSCPOG00000038117) #33	CYP51A1 (ENSCPOG00000014594) #34
Hystricomorpha_b	ANCESTRAL SPECIES	62	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Long-tailed chinchilla	MODERN SPECIES	139	ASB4 (ENSCLAG00000009834) #7	PON2 (ENSCLAG00000009728) #8	PON3 (ENSCLAG00000009609) #9	PON1 (ENSCLAG00000009506) #10	PPP1R9A (ENSCLAG00000008731) #11	Peg10 (ENSCLAG00000017695) #12	SGCE (ENSCLAG00000007837) #13	CASD1 (ENSCLAG00000007565) #14	COL1A2 (ENSCLAG00000009286) #15	BET1 (ENSCLAG00000008520) #16	GNG11 (ENSCLAG00000008494) #17	GNGT1 (ENSCLAG00000008339) #18	TFPI2 (ENSCLAG00000008134) #19	CALCR (ENSCLAG00000007986) #20	VPS50 (ENSCLAG00000007444) #21	HEPACAM2 (ENSCLAG00000007019) #22	SAMD9L (ENSCLAG00000017656)	SAMD9 (ENSCLAG00000017583)	CDK6 (ENSCLAG00000004352) #23	FAM133B (ENSCLAG00000004241) #25	ENSCLAG00000003974 #26	RBM48 (ENSCLAG00000003877) #27	PEX1 (ENSCLAG00000003719) #28	ENSCLAG00000003685 #29	ENSCLAG00000003315 #29	ENSCLAG00000003268 #30	ANKIB1 (ENSCLAG00000003060) #31	KRIT1 (ENSCLAG00000008236) #32	LRRD1 (ENSCLAG00000007851) #33	CYP51A1 (ENSCLAG00000007702) #34	AKAP9 (ENSCLAG00000005332) #35
Degu	MODERN SPECIES	303								ENSODEG00000000924	ENSODEG00000000944	GNG11 (ENSODEG00000000955) #17	GNGT1 (ENSODEG00000000972) #18	TFPI2 (ENSODEG00000000988) #19	ENSODEG00000001006	CALCR (ENSODEG00000001037) #20	VPS50 (ENSODEG00000001066) #21	HEPACAM2 (ENSODEG00000001098) #22	ENSODEG00000001113	CDK6 (ENSODEG00000001138) #23	ENSODEG00000001167 #25	ENSODEG00000001236 #26	PEX1 (ENSODEG00000001278) #28	ENSODEG00000000896 #29	ENSODEG00000000916 #30	ANKIB1 (ENSODEG00000001042) #31	KRIT1 (ENSODEG00000001084) #32	ENSODEG00000001141	CYP51A1 (ENSODEG00000001187) #34	AKAP9 (ENSODEG00000001339) #35	ENSODEG00000001578	ENSODEG00000000904 #36	ENSODEG00000018693
Naked mole-rat female	MODERN SPECIES	5	ASB4 (ENSHGLG00000000818) #7	PON2 (ENSHGLG00000044448) #8	PON3 (ENSHGLG00000003028) #9	PON1 (ENSHGLG00000048207) #10	PPP1R9A (ENSHGLG00000002745) #11	Peg10 (ENSHGLG00000039925) #12	SGCE (ENSHGLG00000002437) #13	CASD1 (ENSHGLG00000002281) #14	COL1A2 (ENSHGLG00000002062) #15	ENSHGLG00000002005	ENSHGLG00000044625 #17	GNGT1 (ENSHGLG00000001961) #18	TFPI2 (ENSHGLG00000042350) #19	CALCR (ENSHGLG00000001886) #20	VPS50 (ENSHGLG00000001554) #21	HEPACAM2 (ENSHGLG00000001360) #22	SAMD9 (ENSHGLG00000037413)	CDK6 (ENSHGLG00000013892) #23	ENSHGLG00000041177	FAM133B (ENSHGLG00000014949) #25	PEX1 (ENSHGLG00000015029) #28	GATAD1 (ENSHGLG00000013060) #29	ANKIB1 (ENSHGLG00000013431) #31	KRIT1 (ENSHGLG00000014048) #32	LRRD1 (ENSHGLG00000016636) #33	CYP51A1 (ENSHGLG00000016647) #34	AKAP9 (ENSHGLG00000016663) #35	MTERF1 (ENSHGLG00000036452) #36	FZD1 (ENSHGLG00000016691)	ENSHGLG00000018138	CDK14 (ENSHGLG00000017316)
Lagomorpha	ANCESTRAL SPECIES	50	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT00940000170462	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Rabbit	MODERN SPECIES	1	PDK4 (ENSOCUG00000017120)	ASB4 (ENSOCUG00000017113) #7	PON2 (ENSOCUG00000002014) #8	PON3 (ENSOCUG00000033613) #9	PON1 (ENSOCUG00000005136) #10	PPP1R9A (ENSOCUG00000005128) #11	ENSOCUG00000027535 #12	SGCE (ENSOCUG00000012309) #13	CASD1 (ENSOCUG00000012292) #14	COL1A2 (ENSOCUG00000012264) #15	BET1 (ENSOCUG00000017029) #16	GNG11 (ENSOCUG00000017032) #17	GNGT1 (ENSOCUG00000017038) #18	CALCR (ENSOCUG00000006148) #20	VPS50 (ENSOCUG00000000625) #21	HEPACAM2 (ENSOCUG00000000623) #22	SAMD9L (ENSOCUG00000000619)	SAMD9 (ENSOCUG00000020931)	CDK6 (ENSOCUG00000011078) #23	FAM133B (ENSOCUG00000034985) #25	ENSOCUG00000008475 #27	ENSOCUG00000023961 #30	GATAD1 (ENSOCUG00000014806) #29	PEX1 (ENSOCUG00000008830) #28	ENSOCUG00000013911 #27	ANKIB1 (ENSOCUG00000004576) #31	KRIT1 (ENSOCUG00000004570) #32	LRRD1 (ENSOCUG00000004559) #33	CYP51A1 (ENSOCUG00000004549) #34	AKAP9 (ENSOCUG00000004524) #35	MTERF1 (ENSOCUG00000010902) #36
Pika	MODERN SPECIES	4216															VPS50 (ENSOPRG00000001260) #21	HEPACAM2 (ENSOPRG00000001218) #22
Tree shrew	MODERN SPECIES	4771														CALCR (ENSTBEG00000008568) #20	VPS50 (ENSTBEG00000007202) #21	HEPACAM2 (ENSTBEG00000006724) #22
Laurasiatheria	ANCESTRAL SPECIES	22	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Eulipotyphla	ANCESTRAL SPECIES	1516															ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22
Hedgehog	MODERN SPECIES	7936																HEPACAM2 (ENSEEUG00000001341) #22
Common shrew	MODERN SPECIES	6238															VPS50 (ENSSARG00000011221) #21	HEPACAM2 (ENSSARG00000011209) #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Suina	ANCESTRAL SPECIES	15	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Pig	MODERN SPECIES	17	ASB4 (ENSSSCG00000015333) #7	PON3 (ENSSSCG00000029515) #9	PON1 (ENSSSCG00000015332) #10	PPP1R9A (ENSSSCG00000015329) #11	PEG10 (ENSSSCG00000036049) #12	SGCE (ENSSSCG00000015328) #13	CASD1 (ENSSSCG00000015327) #14	COL1A2 (ENSSSCG00000015326) #15	ENSSSCG00000049961	BET1 (ENSSSCG00000036385) #16	GNG11 (ENSSSCG00000015324) #17	TFPI2 (ENSSSCG00000015322) #19	GNGT1 (ENSSSCG00000015323) #18	CALCR (ENSSSCG00000015320) #20	VPS50 (ENSSSCG00000022982) #21	HEPACAM2 (ENSSSCG00000025870) #22	SAMD9 (ENSSSCG00000027372)	CDK6 (ENSSSCG00000040183) #23	FAM133B (ENSSSCG00000045005) #25	ENSSSCG00000015316 #26	RBM48 (ENSSSCG00000015315) #27	PEX1 (ENSSSCG00000029967) #28	GATAD1 (ENSSSCG00000031835) #29	ENSSSCG00000027356 #30	ANKIB1 (ENSSSCG00000015314) #31	KRIT1 (ENSSSCG00000015313) #32	ENSSSCG00000031827	LRRD1 (ENSSSCG00000029092) #33	CYP51A1 (ENSSSCG00000015311) #34	AKAP9 (ENSSSCG00000015310) #35	MTERF1 (ENSSSCG00000015309) #36
Chacoan peccary	MODERN SPECIES	101	PON2 (ENSCWAG00000004936) #8	PON3 (ENSCWAG00000005028) #9	PON1 (ENSCWAG00000005098) #10	PPP1R9A (ENSCWAG00000005243) #11	ENSCWAG00000006173	PEG10 (ENSCWAG00000006194) #12	SGCE (ENSCWAG00000006293) #13	CASD1 (ENSCWAG00000006679) #14	COL1A2 (ENSCWAG00000006733) #15	BET1 (ENSCWAG00000007113) #16	GNG11 (ENSCWAG00000007780) #17	GNGT1 (ENSCWAG00000007804) #18	TFPI2 (ENSCWAG00000007832) #19	CALCR (ENSCWAG00000007914) #20	VPS50 (ENSCWAG00000008316) #21	HEPACAM2 (ENSCWAG00000008663) #22	SAMD9 (ENSCWAG00000008985)	CDK6 (ENSCWAG00000009017) #23	FAM133B (ENSCWAG00000009061) #25	ENSCWAG00000009104 #26	RBM48 (ENSCWAG00000009135) #27	PEX1 (ENSCWAG00000009188) #28	GATAD1 (ENSCWAG00000009355) #29	ENSCWAG00000009391 #30	ANKIB1 (ENSCWAG00000009451) #31	KRIT1 (ENSCWAG00000009526) #32	LRRD1 (ENSCWAG00000009671) #33	CYP51A1 (ENSCWAG00000009742) #34	AKAP9 (ENSCWAG00000009828) #35	MTERF1 (ENSCWAG00000009888) #36
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Cetacea	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00940000153311.a.b.a.j.a.a	ENSGT00390000004037 #14	ENSGT00390000018821.h	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT01000000219911	ENSGT00390000013973.A.a.d.a	ENSGT00990000214152	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00940000153311.a.b.a.j.a.a	ENSGT00390000004037 #14	ENSGT00390000018821.h	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT01000000219911	ENSGT00390000013973.A.a.d.a	ENSGT00990000214152	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00390000007209.b	ENSGT00930000151026 #34
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT01000000219911	ENSGT00390000013973.A.a.d.a	ENSGT00990000214152	ENSGT00940000157957 #23	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00390000007209.b	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00950000185980
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT01000000219911	ENSGT00390000013973.A.a.d.a	ENSGT00990000214152.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00390000007209.b	ENSGT00930000151026 #34
Monodontidae	ANCESTRAL SPECIES	12	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT01000000219911	ENSGT00390000013973.A.a.d.a	ENSGT00990000214152.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Beluga whale	MODERN SPECIES	72	PON2 (ENSDLEG00000018855) #8	PON3 (ENSDLEG00000018838) #9	PON1 (ENSDLEG00000018817) #10	PPP1R9A (ENSDLEG00000018752) #11	ENSDLEG00000018735 #12	SGCE (ENSDLEG00000018725) #13	CASD1 (ENSDLEG00000018711) #14	COL1A2 (ENSDLEG00000016060) #15	BET1 (ENSDLEG00000021247) #16	ENSDLEG00000021245	GNG11 (ENSDLEG00000021243) #17	GNGT1 (ENSDLEG00000021242) #18	TFPI2 (ENSDLEG00000021240) #19	CALCR (ENSDLEG00000021235) #20	VPS50 (ENSDLEG00000021229) #21	HEPACAM2 (ENSDLEG00000021226) #22	ENSDLEG00000021223	SAMD9 (ENSDLEG00000021221)	ENSDLEG00000021219	CDK6 (ENSDLEG00000021218) #23	ENSDLEG00000021213 #25	ENSDLEG00000021210 #26	RBM48 (ENSDLEG00000021208) #27	PEX1 (ENSDLEG00000021204) #28	GATAD1 (ENSDLEG00000021201) #29	ENSDLEG00000021199 #30	ENSDLEG00000021197	ANKIB1 (ENSDLEG00000021143) #31	KRIT1 (ENSDLEG00000021122) #32	LRRD1 (ENSDLEG00000021117) #33	CYP51A1 (ENSDLEG00000021105) #34
Narwhal	MODERN SPECIES	306	PON3 (ENSMMNG00015007714) #9	PON1 (ENSMMNG00015007758) #10	PPP1R9A (ENSMMNG00015007826) #11	PEG10 (ENSMMNG00015007902) #12	SGCE (ENSMMNG00015008053) #13	CASD1 (ENSMMNG00015008247) #14	COL1A2 (ENSMMNG00015008340) #15	BET1 (ENSMMNG00015008427) #16	ENSMMNG00015008439	ENSMMNG00015008445	GNG11 (ENSMMNG00015008455) #17	ENSMMNG00015008462	TFPI2 (ENSMMNG00015008470) #19	CALCR (ENSMMNG00015008496) #20	VPS50 (ENSMMNG00015008562) #21	HEPACAM2 (ENSMMNG00015008607) #22	ENSMMNG00015008641	SAMD9 (ENSMMNG00015008647)	CDK6 (ENSMMNG00015008661) #23	ENSMMNG00015008676	FAM133B (ENSMMNG00015008692) #25	RBM48 (ENSMMNG00015008704) #27	PEX1 (ENSMMNG00015008736) #28	GATAD1 (ENSMMNG00015008767) #29	ENSMMNG00015008779 #30	ANKIB1 (ENSMMNG00015008796) #31	KRIT1 (ENSMMNG00015008819) #32	LRRD1 (ENSMMNG00015008843) #33	CYP51A1 (ENSMMNG00015008868) #34	AKAP9 (ENSMMNG00015008980) #35	ENSMMNG00015009125
Vaquita	MODERN SPECIES	20	ASB4 (ENSPSNG00000005745) #7	PON2 (ENSPSNG00000005681) #8	PON3 (ENSPSNG00000005618) #9	PPP1R9A (ENSPSNG00000005512) #11	PEG10 (ENSPSNG00000005451) #12	SGCE (ENSPSNG00000005246) #13	CASD1 (ENSPSNG00000005142) #14	COL1A2 (ENSPSNG00000005091) #15	BET1 (ENSPSNG00000005036) #16	ENSPSNG00000005012	GNG11 (ENSPSNG00000004993) #17	ENSPSNG00000004960	TFPI2 (ENSPSNG00000004932) #19	CALCR (ENSPSNG00000004878) #20	VPS50 (ENSPSNG00000004765) #21	HEPACAM2 (ENSPSNG00000004615) #22	ENSPSNG00000004583	SAMD9 (ENSPSNG00000004569)	ENSPSNG00000004558	CDK6 (ENSPSNG00000004540) #23	FAM133B (ENSPSNG00000004517) #25	RBM48 (ENSPSNG00000004497) #27	PEX1 (ENSPSNG00000004442) #28	GATAD1 (ENSPSNG00000004375) #29	ENSPSNG00000004342	ANKIB1 (ENSPSNG00000004305) #31	KRIT1 (ENSPSNG00000004239) #32	LRRD1 (ENSPSNG00000004171) #33	ENSPSNG00000020171	CYP51A1 (ENSPSNG00000020081) #34	AKAP9 (ENSPSNG00000019395) #35
Dolphin	MODERN SPECIES	2786														CALCR (ENSTTRG00000007262) #20	VPS50 (ENSTTRG00000007253) #21	HEPACAM2 (ENSTTRG00000007250) #22
Sperm whale	MODERN SPECIES	16	PON2 (ENSPCTG00005003915) #8	PON3 (ENSPCTG00005003894) #9	PPP1R9A (ENSPCTG00005003688) #11	ENSPCTG00005003606 #12	SGCE (ENSPCTG00005003355) #13	ENSPCTG00005003307	CASD1 (ENSPCTG00005003283) #14	ENSPCTG00005003272	COL1A2 (ENSPCTG00005003157) #15	BET1 (ENSPCTG00005003127) #16	GNG11 (ENSPCTG00005003113) #17	ENSPCTG00005003104	TFPI2 (ENSPCTG00005003092) #19	CALCR (ENSPCTG00005003052) #20	VPS50 (ENSPCTG00005002969) #21	HEPACAM2 (ENSPCTG00005002922) #22	SAMD9 (ENSPCTG00005002911)	ENSPCTG00005002904	CDK6 (ENSPCTG00005002898) #23	FAM133B (ENSPCTG00005002890) #25	ENSPCTG00005002879 #26	RBM48 (ENSPCTG00005002870) #27	PEX1 (ENSPCTG00005002797) #28	GATAD1 (ENSPCTG00005002769) #29	ENSPCTG00005002755	ENSPCTG00005002727 #30	ANKIB1 (ENSPCTG00005002678) #31	KRIT1 (ENSPCTG00005002584) #32	LRRD1 (ENSPCTG00005002550) #33	ENSPCTG00005002542	CYP51A1 (ENSPCTG00005002505) #34
Blue whale	MODERN SPECIES	20	PON3 (ENSBMSG00010009875) #9	PON1 (ENSBMSG00010009764) #10	PPP1R9A (ENSBMSG00010009585) #11	SGCE (ENSBMSG00010009381) #13	ENSBMSG00010009321	CASD1 (ENSBMSG00010009305) #14	ENSBMSG00010009298	COL1A2 (ENSBMSG00010009220) #15	BET1 (ENSBMSG00010009180) #16	GNG11 (ENSBMSG00010009172) #17	ENSBMSG00010009162	TFPI2 (ENSBMSG00010009152) #19	ENSBMSG00010009148	CALCR (ENSBMSG00010009121) #20	VPS50 (ENSBMSG00010009077) #21	HEPACAM2 (ENSBMSG00010009004) #22	ENSBMSG00010008988	SAMD9 (ENSBMSG00010008986)	ENSBMSG00010008978	CDK6 (ENSBMSG00010008966) #23	FAM133B (ENSBMSG00010008958) #25	RBM48 (ENSBMSG00010008940) #27	PEX1 (ENSBMSG00010008909) #28	GATAD1 (ENSBMSG00010008879) #29	ENSBMSG00010008854 #30	ANKIB1 (ENSBMSG00010008835) #31	KRIT1 (ENSBMSG00010008817) #32	LRRD1 (ENSBMSG00010008796) #33	CYP51A1 (ENSBMSG00010008777) #34	AKAP9 (ENSBMSG00010008663) #35	MTERF1 (ENSBMSG00010008604) #36
Pecora	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Percora_a	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Bovidae	ANCESTRAL SPECIES	12	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000163089.b.w	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00950000183198.c.a.b.b	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35
Bos	ANCESTRAL SPECIES	8	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000163089.b.w	ENSGT00940000157957 #23	ENSGT00730000111097.f.q.a #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Bos_a	ANCESTRAL SPECIES	62	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442.o #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000163089.b.w	ENSGT00940000157957 #23	ENSGT00730000111097.f.q.a #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Domestic yak	MODERN SPECIES	23	ENSBGRG00000009424	ENSBGRG00000009453	PON1 (ENSBGRG00000009473) #10	PPP1R9A (ENSBGRG00000009644) #11	PEG10 (ENSBGRG00000010269) #12	SGCE (ENSBGRG00000010402) #13	CASD1 (ENSBGRG00000012722) #14	COL1A2 (ENSBGRG00000013466) #15	BET1 (ENSBGRG00000015296) #16	GNG11 (ENSBGRG00000015452) #17	ENSBGRG00000015514	TFPI2 (ENSBGRG00000015684) #19	CALCR (ENSBGRG00000015763) #20	ENSBGRG00000015863	VPS50 (ENSBGRG00000015918) #21	HEPACAM2 (ENSBGRG00000016378) #22	SAMD9 (ENSBGRG00000016732)	ENSBGRG00000016911	CDK6 (ENSBGRG00000016959) #23	ENSBGRG00000017026 #25	ENSBGRG00000017195 #26	RBM48 (ENSBGRG00000017280) #27	PEX1 (ENSBGRG00000017448) #28	ENSBGRG00000018625	GATAD1 (ENSBGRG00000018643) #29	ENSBGRG00000018687 #30	ANKIB1 (ENSBGRG00000018778) #31	ENSBGRG00000018969	KRIT1 (ENSBGRG00000019003) #32	LRRD1 (ENSBGRG00000019219) #33	CYP51A1 (ENSBGRG00000019342) #34
Wild yak	MODERN SPECIES	1463															ENSBMUG00000007637 #21	HEPACAM2 (ENSBMUG00000007629) #22	SAMD9 (ENSBMUG00000007618)	ENSBMUG00000007611
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000163414	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000163089.b.w	ENSGT00940000157957 #23	ENSGT00730000111097.f.q.a #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00950000183198.c.a.b.b	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005015778	PON2 (ENSBIXG00005002465) #8	PON1 (ENSBIXG00005015707) #10	PPP1R9A (ENSBIXG00005007141) #11	PEG10 (ENSBIXG00005015469) #12	SGCE (ENSBIXG00005015311) #13	CASD1 (ENSBIXG00005014184) #14	ENSBIXG00005001820	COL1A2 (ENSBIXG00005013987) #15	BET1 (ENSBIXG00005013534) #16	GNG11 (ENSBIXG00005013478) #17	GNGT1 (ENSBIXG00005013459) #18	TFPI2 (ENSBIXG00005013434) #19	CALCR (ENSBIXG00005013397) #20	VPS50 (ENSBIXG00005007486) #21	HEPACAM2 (ENSBIXG00005013097) #22	ENSBIXG00005012932	CDK6 (ENSBIXG00005012910) #23	ENSBIXG00005001432 #25	ENSBIXG00005012853 #26	RBM48 (ENSBIXG00005001426) #27	PEX1 (ENSBIXG00005012776) #28	GATAD1 (ENSBIXG00005012696) #29	ENSBIXG00005012667 #30	ANKIB1 (ENSBIXG00005012609) #31	ENSBIXG00005012526	KRIT1 (ENSBIXG00005000332) #32	LRRD1 (ENSBIXG00005012447) #33	CYP51A1 (ENSBIXG00005012409) #34	AKAP9 (ENSBIXG00005007262) #35	MTERF1 (ENSBIXG00005001262) #36
Cow	MODERN SPECIES	23	ASB4 (ENSBTAG00000018185) #7	PON2 (ENSBTAG00000008361) #8	PON3 (ENSBTAG00000034645) #9	PON1 (ENSBTAG00000015654) #10	PPP1R9A (ENSBTAG00000024426) #11	PEG10 (ENSBTAG00000053735) #12	SGCE (ENSBTAG00000021282) #13	CASD1 (ENSBTAG00000009109) #14	COL1A2 (ENSBTAG00000013472) #15	BET1 (ENSBTAG00000003424)	GNG11 (ENSBTAG00000000820) #17	GNGT1 (ENSBTAG00000002674) #18	TFPI2 (ENSBTAG00000015844) #19	CALCR (ENSBTAG00000017458) #20	VPS50 (ENSBTAG00000014255) #21	HEPACAM2 (ENSBTAG00000012456) #22	ENSBTAG00000051416	CDK6 (ENSBTAG00000044023) #23	FAM133B (ENSBTAG00000050705) #25	ENSBTAG00000003810 #26	RBM48 (ENSBTAG00000018363) #27	PEX1 (ENSBTAG00000024431) #28	GATAD1 (ENSBTAG00000021996) #29	TMBIM7 (ENSBTAG00000034905) #30	ENSBTAG00000048169	ENSBTAG00000051645	ANKIB1 (ENSBTAG00000034936) #31	KRIT1 (ENSBTAG00000002750) #32	LRRD1 (ENSBTAG00000001571) #33	CYP51A1 (ENSBTAG00000001992) #34	AKAP9 (ENSBTAG00000007442) #35
American bison	MODERN SPECIES	3058	ASB4 (ENSBBBG00000004982) #7	PON2 (ENSBBBG00000019245) #8	PON3 (ENSBBBG00000019221) #9	PON1 (ENSBBBG00000019206) #10	PPP1R9A (ENSBBBG00000019136) #11	PEG10 (ENSBBBG00000018993) #12	SGCE (ENSBBBG00000018966) #13	CASD1 (ENSBBBG00000004543) #14	COL1A2 (ENSBBBG00000018468) #15	BET1 (ENSBBBG00000018389) #16	GNG11 (ENSBBBG00000004489) #17	GNGT1 (ENSBBBG00000018359) #18	TFPI2 (ENSBBBG00000018353) #19	CALCR (ENSBBBG00000018327) #20	VPS50 (ENSBBBG00000018280) #21	HEPACAM2 (ENSBBBG00000008936) #22	SAMD9 (ENSBBBG00000004453)	ENSBBBG00000004450	CDK6 (ENSBBBG00000018101) #23	ENSBBBG00000018080 #25	ENSBBBG00000018052 #26	RBM48 (ENSBBBG00000018046) #27	PEX1 (ENSBBBG00000018033) #28	GATAD1 (ENSBBBG00000017906) #29	ENSBBBG00000017893 #30	ANKIB1 (ENSBBBG00000017882) #31	ENSBBBG00000007312	KRIT1 (ENSBBBG00000017846) #32	LRRD1 (ENSBBBG00000017736) #33	CYP51A1 (ENSBBBG00000017712) #34	AKAP9 (ENSBBBG00000017684) #35
Caprinae	ANCESTRAL SPECIES	10	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Goat	MODERN SPECIES	23	PON2 (ENSCHIG00000023025) #8	PON3 (ENSCHIG00000011355) #9	PON1 (ENSCHIG00000012757) #10	ENSCHIG00000026533 #11	ENSCHIG00000017712	ENSCHIG00000008653 #11	SGCE (ENSCHIG00000012578) #13	CASD1 (ENSCHIG00000010702) #14	COL1A2 (ENSCHIG00000025647) #15	BET1 (ENSCHIG00000019249) #16	GNG11 (ENSCHIG00000024748) #17	GNGT1 (ENSCHIG00000019362) #18	TFPI2 (ENSCHIG00000026816) #19	CALCR (ENSCHIG00000012930) #20	VPS50 (ENSCHIG00000012919) #21	HEPACAM2 (ENSCHIG00000008983) #22	ENSCHIG00000012415	SAMD9 (ENSCHIG00000007683)	CDK6 (ENSCHIG00000011604) #23	ENSCHIG00000025157 #25	ENSCHIG00000021463 #26	RBM48 (ENSCHIG00000015110) #27	PEX1 (ENSCHIG00000027266) #28	GATAD1 (ENSCHIG00000006633) #29	ENSCHIG00000021464 #30	ANKIB1 (ENSCHIG00000026782) #31	KRIT1 (ENSCHIG00000023971) #32	ENSCHIG00000010640	LRRD1 (ENSCHIG00000018885) #33	CYP51A1 (ENSCHIG00000009890) #34	AKAP9 (ENSCHIG00000015192) #35
Siberian musk deer	MODERN SPECIES	1158	ASB4 (ENSMMSG00000016724) #7	PON2 (ENSMMSG00000016826) #8	PON3 (ENSMMSG00000016879) #9	PON1 (ENSMMSG00000016965) #10	PPP1R9A (ENSMMSG00000017055) #11	ENSMMSG00000017702 #12	SGCE (ENSMMSG00000017770) #13	CASD1 (ENSMMSG00000018464) #14	COL1A2 (ENSMMSG00000018614) #15	BET1 (ENSMMSG00000019037) #16	GNG11 (ENSMMSG00000019086) #17	GNGT1 (ENSMMSG00000019118) #18	TFPI2 (ENSMMSG00000019143) #19	CALCR (ENSMMSG00000019186) #20	VPS50 (ENSMMSG00000019320) #21	HEPACAM2 (ENSMMSG00000019537) #22	SAMD9 (ENSMMSG00000019591)	CDK6 (ENSMMSG00000019610) #23	FAM133B (ENSMMSG00000019652) #25	ENSMMSG00000019693 #26	RBM48 (ENSMMSG00000019723) #27	PEX1 (ENSMMSG00000019776) #28	GATAD1 (ENSMMSG00000019893) #29	ENSMMSG00000019923 #30	ANKIB1 (ENSMMSG00000019956) #31	KRIT1 (ENSMMSG00000020021) #32	LRRD1 (ENSMMSG00000020133) #33	CYP51A1 (ENSMMSG00000020171) #34	AKAP9 (ENSMMSG00000020281) #35	MTERF1 (ENSMMSG00000020744) #36	FZD1 (ENSMMSG00000020757)
Yarkand deer	MODERN SPECIES	9	PON3 (ENSCHYG00000022263) #9	PON1 (ENSCHYG00000022194) #10	PPP1R9A (ENSCHYG00000021788) #11	ENSCHYG00000021731 #12	ENSCHYG00000021697 #12	SGCE (ENSCHYG00000015479) #13	CASD1 (ENSCHYG00000014622) #14	COL1A2 (ENSCHYG00000013003) #15	ENSCHYG00000012852	GNG11 (ENSCHYG00000012802) #17	GNGT1 (ENSCHYG00000012750) #18	TFPI2 (ENSCHYG00000012662) #19	CALCR (ENSCHYG00000012588) #20	VPS50 (ENSCHYG00000011303) #21	ENSCHYG00000011212	HEPACAM2 (ENSCHYG00000011024) #22	SAMD9 (ENSCHYG00000010983)	CDK6 (ENSCHYG00000010888) #23	FAM133B (ENSCHYG00000010767) #25	ENSCHYG00000010713 #26	RBM48 (ENSCHYG00000010605) #27	PEX1 (ENSCHYG00000010398) #28	ENSCHYG00000010319 #30	ANKIB1 (ENSCHYG00000010181) #31	ENSCHYG00000010159	KRIT1 (ENSCHYG00000010032) #32	LRRD1 (ENSCHYG00000009941) #33	CYP51A1 (ENSCHYG00000009800) #34	AKAP9 (ENSCHYG00000009048) #35	MTERF1 (ENSCHYG00000008983) #36	FZD1 (ENSCHYG00000008807)
Camelidae	ANCESTRAL SPECIES	2	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Arabian camel	MODERN SPECIES	33	ASB4 (ENSCDRG00005002691) #7	PON2 (ENSCDRG00005002647) #8	PON3 (ENSCDRG00005002624) #9	PON1 (ENSCDRG00005002595) #10	PPP1R9A (ENSCDRG00005002429) #11	ENSCDRG00005002362 #12	SGCE (ENSCDRG00005001555) #13	CASD1 (ENSCDRG00005001307) #14	COL1A2 (ENSCDRG00005001119) #15	BET1 (ENSCDRG00005001048) #16	GNG11 (ENSCDRG00005001026) #17	GNGT1 (ENSCDRG00005001019) #18	TFPI2 (ENSCDRG00005000988) #19	CALCR (ENSCDRG00005000927) #20	VPS50 (ENSCDRG00005000733) #21	HEPACAM2 (ENSCDRG00005000646) #22	ENSCDRG00005000621	CDK6 (ENSCDRG00005000596) #23	FAM133B (ENSCDRG00005000566) #25	ENSCDRG00005000541 #26	RBM48 (ENSCDRG00005000519) #27	PEX1 (ENSCDRG00005000200) #28	ENSCDRG00005000099 #29	ENSCDRG00005000081 #30	ANKIB1 (ENSCDRG00005000061) #31	KRIT1 (ENSCDRG00005022098) #32	LRRD1 (ENSCDRG00005022094) #33	CYP51A1 (ENSCDRG00005022091) #34	AKAP9 (ENSCDRG00005022051) #35	MTERF1 (ENSCDRG00005022042) #36	ENSCDRG00005022040
Alpaca	MODERN SPECIES	275							SGCE (ENSVPAG00000002283) #13	CASD1 (ENSVPAG00000002280) #14	COL1A2 (ENSVPAG00000002265) #15	ENSVPAG00000002264 #16	GNG11 (ENSVPAG00000002263) #17	GNGT1 (ENSVPAG00000002262) #18	TFPI2 (ENSVPAG00000002261) #19	CALCR (ENSVPAG00000002260) #20	VPS50 (ENSVPAG00000002259) #21	HEPACAM2 (ENSVPAG00000002258) #22	SAMD9 (ENSVPAG00000002257)	CDK6 (ENSVPAG00000002256) #23	RBM48 (ENSVPAG00000002255) #27	PEX1 (ENSVPAG00000002254) #28	GATAD1 (ENSVPAG00000002253) #29	ANKIB1 (ENSVPAG00000002252) #31	KRIT1 (ENSVPAG00000002251) #32
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917.l #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Ursidae	ANCESTRAL SPECIES	12	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00940000155398.dc.a	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639.cb.b #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917.l #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Ursus	ANCESTRAL SPECIES	54	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00940000155398.dc.a	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639.cb.b #15	ENSGT00900000143815	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917.l #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b.i #35	ENSGT00530000063817.a #36	ENSGT00940000162584
American black bear	MODERN SPECIES	6028																HEPACAM2 (ENSUAMG00000011565) #22	ENSUAMG00000011570
Polar bear	MODERN SPECIES	132	PON3 (ENSUMAG00000021419) #9	PON1 (ENSUMAG00000021412) #10	PPP1R9A (ENSUMAG00000021167) #11	ENSUMAG00000021109	PEG10 (ENSUMAG00000021102) #12	SGCE (ENSUMAG00000021093) #13	CASD1 (ENSUMAG00000021083) #14	COL1A2 (ENSUMAG00000019929) #15	ENSUMAG00000019732	BET1 (ENSUMAG00000019728) #16	GNG11 (ENSUMAG00000019724) #17	GNGT1 (ENSUMAG00000019721) #18	TFPI2 (ENSUMAG00000019720) #19	CALCR (ENSUMAG00000019707) #20	VPS50 (ENSUMAG00000019183) #21	HEPACAM2 (ENSUMAG00000019120) #22	SAMD9L (ENSUMAG00000019118)	CDK6 (ENSUMAG00000019087) #23	ENSUMAG00000019075 #25	ENSUMAG00000019067 #26	RBM48 (ENSUMAG00000019063) #27	PEX1 (ENSUMAG00000019043) #28	ENSUMAG00000019033 #29	ENSUMAG00000019021 #30	ANKIB1 (ENSUMAG00000019015) #31	KRIT1 (ENSUMAG00000018995) #32	LRRD1 (ENSUMAG00000018987) #33	CYP51A1 (ENSUMAG00000018983) #34	ENSUMAG00000018794 #35	ENSUMAG00000018661 #35	MTERF1 (ENSUMAG00000018642) #36
Giant Panda	MODERN SPECIES		PON2 (ENSAMEG00000010274) #8	PON3 (ENSAMEG00000010256) #9	PON1 (ENSAMEG00000010218) #10	PPP1R9A (ENSAMEG00000025027) #11	ENSAMEG00000028570	PEG10 (ENSAMEG00000019304) #12	SGCE (ENSAMEG00000017461) #13	CASD1 (ENSAMEG00000017482) #14	COL1A2 (ENSAMEG00000017486) #15	BET1 (ENSAMEG00000027819) #16	GNG11 (ENSAMEG00000017737) #17	GNGT1 (ENSAMEG00000017741) #18	TFPI2 (ENSAMEG00000017742) #19	CALCR (ENSAMEG00000017747) #20	VPS50 (ENSAMEG00000017766) #21	HEPACAM2 (ENSAMEG00000017795) #22	SAMD9L (ENSAMEG00000019309)	CDK6 (ENSAMEG00000017811) #23	FAM133B (ENSAMEG00000007438) #25	ENSAMEG00000002030 #26	RBM48 (ENSAMEG00000002033) #27	PEX1 (ENSAMEG00000002049) #28	GATAD1 (ENSAMEG00000005644) #29	ENSAMEG00000005647 #30	ANKIB1 (ENSAMEG00000005652) #31	KRIT1 (ENSAMEG00000005677) #32	LRRD1 (ENSAMEG00000005721) #33	CYP51A1 (ENSAMEG00000005722) #34	AKAP9 (ENSAMEG00000005758) #35	FZD1 (ENSAMEG00000019295)	ENSAMEG00000025892
Mustelinae	ANCESTRAL SPECIES	46	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917.k #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Ferret	MODERN SPECIES	394													ENSMPUG00000008130	CALCR (ENSMPUG00000008144) #20	VPS50 (ENSMPUG00000008300) #21	HEPACAM2 (ENSMPUG00000008320) #22	SAMD9L (ENSMPUG00000019059)	ENSMPUG00000019060	CDK6 (ENSMPUG00000008328) #23	FAM133B (ENSMPUG00000008337) #25	ENSMPUG00000008345 #26	RBM48 (ENSMPUG00000008377) #27	PEX1 (ENSMPUG00000008386) #28	GATAD1 (ENSMPUG00000008401) #29	ENSMPUG00000008432 #30	ANKIB1 (ENSMPUG00000008462) #31	KRIT1 (ENSMPUG00000008481) #32	LRRD1 (ENSMPUG00000008496) #33	CYP51A1 (ENSMPUG00000008516) #34	AKAP9 (ENSMPUG00000008532) #35	MTERF1 (ENSMPUG00000008568) #36
American mink	MODERN SPECIES	89	PON1 (ENSNVIG00000019295) #10	PPP1R9A (ENSNVIG00000019078) #11	PEG10 (ENSNVIG00000019037) #12	SGCE (ENSNVIG00000018356) #13	CASD1 (ENSNVIG00000018302) #14	COL1A2 (ENSNVIG00000018177) #15	ENSNVIG00000018159	BET1 (ENSNVIG00000018122) #16	GBG11 (ENSNVIG00000018116) #17	GNGT1 (ENSNVIG00000018112) #18	ENSNVIG00000018108 #19	ENSNVIG00000018102 #19	ENSNVIG00000018095	CALCR (ENSNVIG00000018033) #20	CC132 (ENSNVIG00000017812) #21	HEPACAM2 (ENSNVIG00000017756) #22	SAMD9L (ENSNVIG00000017741)	CDK6 (ENSNVIG00000017691) #23	FAM133B (ENSNVIG00000017618) #25
Canidae	ANCESTRAL SPECIES	22	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Dog	MODERN SPECIES	5	PON2 (ENSCAFG00845020811) #8	PON1 (ENSCAFG00845020697) #9	PON1 (ENSCAFG00845020626) #10	PPP1R9A (ENSCAFG00845019528) #11	PEG10 (ENSCAFG00845019307) #12	SGCE (ENSCAFG00845018808) #13	CASD1 (ENSCAFG00845018361) #14	COL1A2 (ENSCAFG00845017038) #15	BET1 (ENSCAFG00845016464) #16	ENSCAFG00845016402 #17	TFPI2 (ENSCAFG00845016351) #19	GNGT1 (ENSCAFG00845016275) #18	ENSCAFG00845016225	CALCR (ENSCAFG00845014052) #20	VPS50 (ENSCAFG00845013594) #21	HEPACAM2 (ENSCAFG00845013350) #22	ENSCAFG00845013314	SAMD9L (ENSCAFG00845013275)	CDK6 (ENSCAFG00845013226) #23	ENSCAFG00845013194 #25	ENSCAFG00845013132 #26	RBM48 (ENSCAFG00845013110) #27	PEX1 (ENSCAFG00845012932) #28	GATAD1 (ENSCAFG00845012816) #29	TMBIM7 (ENSCAFG00845012769) #30	ANKIB1 (ENSCAFG00845012711) #31	KRIT1 (ENSCAFG00845012624) #32	LRRD1 (ENSCAFG00845012529) #33	CYP51A1 (ENSCAFG00845012499) #34	AKAP9 (ENSCAFG00845012251) #35	MTERF1 (ENSCAFG00845012129) #36
Dingo	MODERN SPECIES	203	PON2 (ENSCAFG00020011216) #8	PON3 (ENSCAFG00020011223) #9	PON1 (ENSCAFG00020011240) #10	PPP1R9A (ENSCAFG00020011260) #11	PEG10 (ENSCAFG00020011590) #12	SGCE (ENSCAFG00020011594) #13	CASD1 (ENSCAFG00020011601) #14	COL1A2 (ENSCAFG00020011621) #15	BET1 (ENSCAFG00020011639) #16	GNG11 (ENSCAFG00020011648) #17	GNGT1 (ENSCAFG00020011652) #18	TFPI2 (ENSCAFG00020011653) #19	ENSCAFG00020011656	CALCR (ENSCAFG00020011670) #20	VPS50 (ENSCAFG00020011719) #21	HEPACAM2 (ENSCAFG00020011863) #22	SAMD9L (ENSCAFG00020011874)	CDK6 (ENSCAFG00020011877) #23	ENSCAFG00020011879 #25	ENSCAFG00020011881 #26	RBM48 (ENSCAFG00020011883) #27	PEX1 (ENSCAFG00020011886) #28	GATAD1 (ENSCAFG00020012131) #29	ENSCAFG00020012133 #30	ANKIB1 (ENSCAFG00020012167) #31	KRIT1 (ENSCAFG00020012582) #32	LRRD1 (ENSCAFG00020012589) #33	CYP51A1 (ENSCAFG00020012602) #34	AKAP9 (ENSCAFG00020012750) #35	MTERF1 (ENSCAFG00020015983) #36	FZD1 (ENSCAFG00020015984)
Felidae	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00390000018344.l.a	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427.d #33	ENSGT00940000161427.c #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00390000018344.l.a	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427.d #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
Tiger	MODERN SPECIES	86	PON2 (ENSPTIG00000007995) #8	PON3 (ENSPTIG00000010734) #9	PON1 (ENSPTIG00000013016) #10	PPP1R9A (ENSPTIG00000013264) #11	ENSPTIG00000020088 #12	SGCE (ENSPTIG00000003426) #13	CASD1 (ENSPTIG00000011670) #14	COL1A2 (ENSPTIG00000013857) #15	BET1 (ENSPTIG00000007379) #16	GNG11 (ENSPTIG00000008629) #17	GNGT1 (ENSPTIG00000009422) #18	TFPI2 (ENSPTIG00000010743) #19	ENSPTIG00000011416	CALCR (ENSPTIG00000011922) #20	VPS50 (ENSPTIG00000016825) #21	HEPACAM2 (ENSPTIG00000005522) #22	CDK6 (ENSPTIG00000010732) #23	FAM133B (ENSPTIG00000012050) #25	ENSPTIG00000015217 #26	RBM48 (ENSPTIG00000015729) #27	PEX1 (ENSPTIG00000016431) #28	ENSPTIG00000006969 #29	ENSPTIG00000021172 #30	ANKIB1 (ENSPTIG00000006747) #31	KRIT1 (ENSPTIG00000007931) #32	ENSPTIG00000017125 #33	CYP51A1 (ENSPTIG00000017824) #34	AKAP9 (ENSPTIG00000018830) #35	MTERF1 (ENSPTIG00000016254) #36	CDK14 (ENSPTIG00000017718)	ENSPTIG00000021823
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00390000018344.l.a	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427.d #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36	ENSGT00940000162584
leopard	MODERN SPECIES	9	PON2 (ENSPPRG00000008699) #8	PON3 (ENSPPRG00000009646) #9	PON1 (ENSPPRG00000009771) #10	PPP1R9A (ENSPPRG00000020457) #11	ENSPPRG00000000292 #12	SGCE (ENSPPRG00000002186) #13	CASD1 (ENSPPRG00000002948) #14	COL1A2 (ENSPPRG00000007258) #15	BET1 (ENSPPRG00000007981) #16	GNG11 (ENSPPRG00000008116) #17	GNGT1 (ENSPPRG00000008508) #18	TFPI2 (ENSPPRG00000008666) #19	ENSPPRG00000008996	CALCR (ENSPPRG00000013040) #20	VPS50 (ENSPPRG00000018689) #21	HEPACAM2 (ENSPPRG00000024384) #22	CDK6 (ENSPPRG00000023860) #23	ENSPPRG00000023128 #25	ENSPPRG00000000419 #26	RBM48 (ENSPPRG00000000466) #27	PEX1 (ENSPPRG00000002724) #28	GATAD1 (ENSPPRG00000003057) #29	ENSPPRG00000006310 #30	ANKIB1 (ENSPPRG00000006639) #31	KRIT1 (ENSPPRG00000010220) #32	ENSPPRG00000010461 #33	CYP51A1 (ENSPPRG00000011357) #34	AKAP9 (ENSPPRG00000001345) #35	MTERF1 (ENSPPRG00000002171) #36	FZD1 (ENSPPRG00000018206)	CDK14 (ENSPPRG00000003433)
lion	MODERN SPECIES	2	PON3 (ENSPLOG00000017038) #9	PON1 (ENSPLOG00000016943) #10	PPP1R9A (ENSPLOG00000016519) #11	PEG10 (ENSPLOG00000016403) #12	SGCE (ENSPLOG00000015060) #13	CASD1 (ENSPLOG00000014818) #14	COL1A2 (ENSPLOG00000013973) #15	BET1 (ENSPLOG00000013897) #16	GNG11 (ENSPLOG00000013852) #17	GNGT1 (ENSPLOG00000013812) #18	TFPI2 (ENSPLOG00000013738) #19	ENSPLOG00000013705	ENSPLOG00000013671	CALCR (ENSPLOG00000013499) #20	VPS50 (ENSPLOG00000012886) #21	HEPACAM2 (ENSPLOG00000012611) #22	SAMD9L (ENSPLOG00000012575)	CDK6 (ENSPLOG00000012520) #23	FAM133B (ENSPLOG00000012467) #25	ENSPLOG00000012402 #26	RBM48 (ENSPLOG00000012361) #27	PEX1 (ENSPLOG00000012237) #28	GATAD1 (ENSPLOG00000012159) #29	ENSPLOG00000012033 #30	ANKIB1 (ENSPLOG00000011976) #31	KRIT1 (ENSPLOG00000011898) #32	ENSPLOG00000011855 #33	CYP51A1 (ENSPLOG00000011713) #34	AKAP9 (ENSPLOG00000011181) #35	FZD1 (ENSPLOG00000011131)	CDK14 (ENSPLOG00000010776)
Cat	MODERN SPECIES	1	PON3 (ENSFCAG00000008297) #9	PON1 (ENSFCAG00000019028) #10	PPP1R9A (ENSFCAG00000011043) #11	PEG10 (ENSFCAG00000041002) #12	SGCE (ENSFCAG00000026567) #13	CASD1 (ENSFCAG00000023057) #14	COL1A2 (ENSFCAG00000030892) #15	BET1 (ENSFCAG00000038611) #16	GNG11 (ENSFCAG00000032833) #17	GNGT1 (ENSFCAG00000026801) #18	TFPI2 (ENSFCAG00000031395) #19	ENSFCAG00000025321	ENSFCAG00000032849	CALCR (ENSFCAG00000007443) #20	VPS50 (ENSFCAG00000007438) #21	HEPACAM2 (ENSFCAG00000028741) #22	SAMD9L (ENSFCAG00000029344)	CDK6 (ENSFCAG00000045118) #23	FAM133B (ENSFCAG00000030190) #25	ENSFCAG00000024823 #26	RBM48 (ENSFCAG00000038430) #27	PEX1 (ENSFCAG00000014645) #28	GATAD1 (ENSFCAG00000018515) #29	TMBIM7 (ENSFCAG00000031366) #30	ANKIB1 (ENSFCAG00000022205) #31	KRIT1 (ENSFCAG00000028106) #32	ENSFCAG00000042221 #33	ENSFCAG00000051313 #33	CYP51A1 (ENSFCAG00000025479) #34	AKAP9 (ENSFCAG00000019191) #35	MTERF1 (ENSFCAG00000044797) #36
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Chiroptera	ANCESTRAL SPECIES	24	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT01100000263525.b.b.b #18	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Microchiroptera	ANCESTRAL SPECIES	24	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874 #7	ENSGT00390000008932.c.a.a #8	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT01100000263525.b.b.b #18	ENSGT01100000263525.b.b.a #17	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Microbat	MODERN SPECIES	952	PDK4 (ENSMLUG00000007027)	ASB4 (ENSMLUG00000007018) #7	PON2 (ENSMLUG00000006998) #8	PON3 (ENSMLUG00000006984) #9	PON1 (ENSMLUG00000014176) #10	PPP1R9A (ENSMLUG00000014166) #11	SGCE (ENSMLUG00000016724) #13	CASD1 (ENSMLUG00000016713) #14	COL1A2 (ENSMLUG00000015487) #15	ENSMLUG00000028366	ENSMLUG00000026472 #17	TFPI2 (ENSMLUG00000017498) #19	ENSMLUG00000023902	CALCR (ENSMLUG00000006718) #20	VPS50 (ENSMLUG00000010632) #21	HEPACAM2 (ENSMLUG00000000672) #22	SAMD9L (ENSMLUG00000017034)	ENSMLUG00000022770	ENSMLUG00000027335	CDK6 (ENSMLUG00000011872) #23	FAM133B (ENSMLUG00000005933) #25	ENSMLUG00000028906 #26	RBM48 (ENSMLUG00000011863) #27	PEX1 (ENSMLUG00000011828) #28	GATAD1 (ENSMLUG00000011820) #29	ENSMLUG00000028584 #30	ANKIB1 (ENSMLUG00000011789) #31	KRIT1 (ENSMLUG00000017177) #32	CYP51A1 (ENSMLUG00000017714) #34	AKAP9 (ENSMLUG00000017713) #35	MTERF1 (ENSMLUG00000011330) #36
Megabat	MODERN SPECIES	2937															VPS50 (ENSPVAG00000016984) #21	HEPACAM2 (ENSPVAG00000016983) #22
Equus	ANCESTRAL SPECIES	13	ENSGT00390000008932.c.b #9	ENSGT00390000008932.c.a.b #10	ENSGT00940000155538 #11	ENSGT00950000183173.P #12	ENSGT00390000005672.a.b #13	ENSGT00910000147396	ENSGT00390000004037 #14	ENSGT00940000155639 #15	ENSGT00390000011864.l	ENSGT00940000162637 #16	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442 #21	ENSGT01100000263551.b.b.b #22	ENSGT00390000013973.A.a.d.b	ENSGT00390000013973.A.a.d.a	ENSGT00940000157957 #23	ENSGT00730000111097.f #25	ENSGT00940000163856 #26	ENSGT00390000004541 #27	ENSGT00550000075032 #28	ENSGT00390000018554 #29	ENSGT01050000244890.b #30	ENSGT00940000157621 #31	ENSGT00530000063721.A #32	ENSGT00940000161427 #33	ENSGT00930000151026 #34	ENSGT00730000110871.a.b #35	ENSGT00530000063817.a #36
Donkey	MODERN SPECIES		ENSEASG00005028182	PON3 (ENSEASG00005020888) #9	PON1 (ENSEASG00005020870) #10	PPP1R9A (ENSEASG00005020843) #11	PEG10 (ENSEASG00005020829) #12	SGCE (ENSEASG00005020815) #13	CASD1 (ENSEASG00005020801) #14	COL1A2 (ENSEASG00005020296) #15	ENSEASG00005020157	BET1 (ENSEASG00005035994) #16	GNG11 (ENSEASG00005028194) #17	GNGT1 (ENSEASG00005020149) #18	TFPI2 (ENSEASG00005020144) #19	CALCR (ENSEASG00005020131) #20	VPS50 (ENSEASG00005020108) #21	HEPACAM2 (ENSEASG00005020097) #22	ENSEASG00005033147	ENSEASG00005035175	SAMD9 (ENSEASG00005020088)	CDK6 (ENSEASG00005020081) #23	FAM133B (ENSEASG00005020075) #25	ENSEASG00005020062 #26	RBM48 (ENSEASG00005020055) #27	PEX1 (ENSEASG00005020048) #28	GATAD1 (ENSEASG00005020044) #29	ENSEASG00005036639 #30	ANKIB1 (ENSEASG00005020038) #31	KRIT1 (ENSEASG00005020028) #32	LRRD1 (ENSEASG00005020024) #33	CYP51A1 (ENSEASG00005020020) #34	AKAP9 (ENSEASG00005019732) #35
Horse	MODERN SPECIES	25	PON2 (ENSECAG00000010414) #8	PON3 (ENSECAG00000009974) #9	PON1 (ENSECAG00000000344) #10	PPP1R9A (ENSECAG00000015961) #11	PEG10 (ENSECAG00000001603) #12	SGCE (ENSECAG00000020155) #13	ENSECAG00000050540	CASD1 (ENSECAG00000011527) #14	COL1A2 (ENSECAG00000024740) #15	ENSECAG00000024504	BET1 (ENSECAG00000024195)	GNGT1 (ENSECAG00000018842) #18	TFPI2 (ENSECAG00000019398) #19	CALCR (ENSECAG00000001570) #20	VPS50 (ENSECAG00000022811) #21	HEPACAM2 (ENSECAG00000019487) #22	SAMD9L (ENSECAG00000001481)	SAMD9 (ENSECAG00000001399)	CDK6 (ENSECAG00000016512) #23	FAM133B (ENSECAG00000026810) #25	ENSECAG00000052012 #26	RBM48 (ENSECAG00000011070) #27	PEX1 (ENSECAG00000021379) #28	GATAD1 (ENSECAG00000021181) #29	ENSECAG00000053246 #30	ANKIB1 (ENSECAG00000010373) #31	KRIT1 (ENSECAG00000016850) #32	LRRD1 (ENSECAG00000014527) #33	CYP51A1 (ENSECAG00000006455) #34	AKAP9 (ENSECAG00000020181) #35	MTERF1 (ENSECAG00000018128) #36
Marsupialia	ANCESTRAL SPECIES	57								ENSGT00940000163414	ENSGT00940000164410	ENSGT00990000204321	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442.n #21	ENSGT01100000263551.b.b.b #22
Marsupialia_b	ANCESTRAL SPECIES	14						ENSGT00390000004199	ENSGT00940000161957	ENSGT00940000163414	ENSGT00940000164410	ENSGT00990000204321	ENSGT01100000263525.b.b.a #17	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442.n #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000156148	ENSGT00940000155574.C	ENSGT00940000163083	ENSGT00940000160796	ENSGT00950000183092.b.b	ENSGT00940000159476	ENSGT00940000153370.b	ENSGT00950000182952.D	ENSGT00390000010053	ENSGT00390000011897	ENSGT00940000159941	ENSGT00940000157444	ENSGT00940000160986	ENSGT00940000157238	ENSGT00390000004860
Diprotodontia	ANCESTRAL SPECIES	61							ENSGT00390000004199	ENSGT00940000161957	ENSGT00940000163414	ENSGT00940000164410	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442.n #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000156148	ENSGT00940000155574.C	ENSGT00940000163083	ENSGT00940000160796	ENSGT00950000183092.b.b	ENSGT00940000159476	ENSGT00940000153370.b	ENSGT00950000182952.D	ENSGT00390000010053	ENSGT00390000011897	ENSGT00940000159941	ENSGT00940000157444	ENSGT00940000160986	ENSGT00940000157238	ENSGT00390000004860
Diprotodontia_a	ANCESTRAL SPECIES	10							ENSGT00390000004199	ENSGT00940000161957	ENSGT00940000163414	ENSGT00940000164410	ENSGT00990000204321	ENSGT01100000263525.b.b.b #18	ENSGT00940000159917 #19	ENSGT00940000155380 #20	ENSGT00390000003442.n.a #21	ENSGT01100000263551.b.b.b #22	ENSGT00940000156148	ENSGT00940000155574.C	ENSGT00940000163083	ENSGT00940000160453	ENSGT00940000160796	ENSGT00950000183092.b.b	ENSGT00940000159476	ENSGT00940000153370.b	ENSGT00950000182952.D	ENSGT00390000010053	ENSGT00390000011897	ENSGT00940000159941	ENSGT00940000157444	ENSGT00940000160986	ENSGT00940000157238
koala	MODERN SPECIES	346						ENSPCIG00000032447	ENSPCIG00000010065	ENSPCIG00000014207	ENSPCIG00000025435	ENSPCIG00000011205	ENSPCIG00000011201	GNGT1 (ENSPCIG00000011200) #18	ENSPCIG00000011196 #19	CALCR (ENSPCIG00000013173) #20	VPS50 (ENSPCIG00000013184) #21	HEPACAM2 (ENSPCIG00000013185) #22	UBP1 (ENSPCIG00000013186)	CLASP2 (ENSPCIG00000013269)	ENSPCIG00000025595	ENSPCIG00000025598
Common wonbat	MODERN SPECIES	1053			ENSVURG00010019332	ENSVURG00010019328	ENSVURG00010019320	ENSVURG00010019305	CHP2 (ENSVURG00010019298)	ENSVURG00010019288	ENSVURG00010019282	ENSVURG00010019273	GNGT1 (ENSVURG00010019270) #18	TFPI2 (ENSVURG00010019266) #19	CALCR (ENSVURG00010019257) #20	ENSVURG00010018527 #21	ENSVURG00010018485	HEPACAM2 (ENSVURG00010018479) #22	UBP1 (ENSVURG00010018427)	CLASP2 (ENSVURG00010018322)	ENSVURG00010018288	TAPBPL (ENSVURG00010018282)	ENSVURG00010018212	ENSVURG00010018205	STAC (ENSVURG00010018159)	DCLK3 (ENSVURG00010018148)	TRANK1 (ENSVURG00010018135)	ENSVURG00010018117	IPPK (ENSVURG00010018105)	ENSVURG00010018098	ECM2 (ENSVURG00010018095)	ASPN (ENSVURG00010018088)	OMD (ENSVURG00010018083)
Platypus	MODERN SPECIES	19	SLC25A13 (ENSOANG00000048992)	DYNC1I1 (ENSOANG00000041794)	PDK4 (ENSOANG00000014566)	ASB4 (ENSOANG00000048426) #7	PON3 (ENSOANG00000048302) #9	ENSOANG00000022299 #11	SGCE (ENSOANG00000004259) #13	CASD1 (ENSOANG00000004261) #14	COL1A2 (ENSOANG00000002525) #15	ENSOANG00000039305 #16	GNG11 (ENSOANG00000051316) #17	GNGT1 (ENSOANG00000051164) #18	ENSOANG00000046025	CALCR (ENSOANG00000042421) #20	VPS50 (ENSOANG00000036008) #21	HEPACAM2 (ENSOANG00000004158) #22	CDK6 (ENSOANG00000039459) #23	ENSOANG00000001763 #25	ENSOANG00000012123	ENSOANG00000041229 #27	PEX1 (ENSOANG00000012125) #28	GATAD1 (ENSOANG00000038373) #29	ENSOANG00000044362 #30	ANKIB1 (ENSOANG00000047884) #31	KRIT1 (ENSOANG00000009505) #32	ENSOANG00000007205 #33	CYP51A1 (ENSOANG00000013144) #34	ENSOANG00000036730 #35	ENSOANG00000004680 #36	FZD1 (ENSOANG00000040316)	CDK14 (ENSOANG00000013237)
Anura	ANCESTRAL SPECIES	178													ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT00390000013973.A.a.d	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000026473	ABHD5 (ENSLLEG00000026513)	ANO10 (ENSLLEG00000026697)	SNRK (ENSLLEG00000027105)	POMGNT2 (ENSLLEG00000027173)	GASK1A (ENSLLEG00000027199)	ENSLLEG00000027256	ENSLLEG00000027273	GTPBP4 (ENSLLEG00000027328)	ENSLLEG00000027480	LARP4B (ENSLLEG00000027492)	ENSLLEG00000027571	DIP2C (ENSLLEG00000027642)	ENSLLEG00000028493	ZMYND11 (ENSLLEG00000028510)	HEPACAM2 (ENSLLEG00000028605) #22	VPS50 (ENSLLEG00000028814) #21	ENSLLEG00000029805	ENSLLEG00000029814 #20	ENSLLEG00000029837	ENSLLEG00000029845	ENSLLEG00000029851	TFPI2 (ENSLLEG00000029867) #19	ENSLLEG00000029897 #17	ENSLLEG00000029910	ENSLLEG00000029930	ENSLLEG00000029943	COL1A2 (ENSLLEG00000006321) #15	CASD1 (ENSLLEG00000006550) #14	SGCE (ENSLLEG00000006774) #13	PPP1R9A (ENSLLEG00000007469) #11
Frog	MODERN SPECIES	6	mterf1 (ENSXETG00000039027) #36	akap9 (ENSXETG00000003440) ##35	cyp51a1 (ENSXETG00000003432) #34	lrrd1 (ENSXETG00000030611) #33	krit1 (ENSXETG00000030227) #32	ankib1 (ENSXETG00000033950) #31	ENSXETG00000048946	ENSXETG00000037958	rbm48 (ENSXETG00000003421) #27	pex1 (ENSXETG00000003420) #28	grina (ENSXETG00000030159) #30	rpp38 (ENSXETG00000003419)	gatad1 (ENSXETG00000018528) #29	fam133b (ENSXETG00000027391) #25	cdk6 (ENSXETG00000018529) #23	hepacam2 (ENSXETG00000013881) #22	ENSXETG00000048147	vps50 (ENSXETG00000013885) #21	ENSXETG00000040876	calcr (ENSXETG00000031529) #20	tfpi2 (ENSXETG00000013900) #19	gngt1 (ENSXETG00000013901) #17	mgc147631 (ENSXETG00000013902)	bet1 (ENSXETG00000044866)	col1a2 (ENSXETG00000020318) #15	casd1 (ENSXETG00000020309) #14	sgce (ENSXETG00000020306) #13	ppp1r9a (ENSXETG00000020305) #11	pon2 (ENSXETG00000020299) #8	asb4 (ENSXETG00000020295) #7	pdk4 (ENSXETG00000020289)
Coelacanth	MODERN SPECIES	2751													ENSLACG00000000527	ENSLACG00000003889	ENSLACG00000006391	HEPACAM2 (ENSLACG00000006735) #22
Actinopterygii	ANCESTRAL SPECIES	9	ENSGT00530000063817.a #36	ENSGT00730000110871.a.a.a.a ##35	ENSGT00930000151026 #34	ENSGT00940000161427 #33	ENSGT00530000063721.A #32	ENSGT00940000157621 #31	ENSGT01050000244890.b #30	ENSGT00390000018554 #29	ENSGT00940000167569	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Neopterygii	ANCESTRAL SPECIES	7	ENSGT00530000063817.a #36	ENSGT00730000110871.a.a.a.a ##35	ENSGT00930000151026 #34	ENSGT00940000161427 #33	ENSGT00530000063721.A #32	ENSGT00940000157621 #31	ENSGT01050000244890.b #30	ENSGT00390000018554 #29	ENSGT00940000167569	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00390000008932 #8	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032	ENSGT00940000159344
Osteoglossocephalai	ANCESTRAL SPECIES	88	ENSGT01030000234543.F	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000171718	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b	ENSGT00940000159344	ENSGT00940000162732
Osteoglossiformes	ANCESTRAL SPECIES	6	ENSGT00450000040303	ENSGT01030000234543.F	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994.a	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b	ENSGT00940000162732	ENSGT00940000157683
P. kingsleyae	MODERN SPECIES	13	poc1bl (ENSPKIG00000000463)	si:dkey-184p18.2 (ENSPKIG00000000539)	rp9 (ENSPKIG00000000552)	ELMO1 (ENSPKIG00000000608)	pex1 (ENSPKIG00000000748) #28	ENSPKIG00000000779	rbm48 (ENSPKIG00000000801) #27	efcab1 (ENSPKIG00000000818)	ENSPKIG00000000843	ENSPKIG00000000848	ENSPKIG00000000860	ENSPKIG00000000877	ENSPKIG00000000889	FAM133B (ENSPKIG00000000908) #25	cdk6 (ENSPKIG00000000942) #23	hepacam2 (ENSPKIG00000000968) #22	VPS50 (ENSPKIG00000001030) #21	CALCR (ENSPKIG00000001126) #20	tfpi2 (ENSPKIG00000001156) #19	gngt1 (ENSPKIG00000001175) #17	zgc:85777 (ENSPKIG00000001194)	bet1 (ENSPKIG00000001227)	col1a2 (ENSPKIG00000001264) #15	casd1 (ENSPKIG00000001368) #14	sgce (ENSPKIG00000001468) #13	PPP1R9A (ENSPKIG00000001567) #11	asb4 (ENSPKIG00000001670) #7	pdk4 (ENSPKIG00000001694)	DYNC1I1 (ENSPKIG00000001721)	sem1 (ENSPKIG00000001755)	dlx6a (ENSPKIG00000001768)
Asian bonytongue	MODERN SPECIES	15	abitram (ENSSFOG00015011127)	ctnnal1 (ENSSFOG00015011192)	elp2 (ENSSFOG00015011290)	gabbr2 (ENSSFOG00015011370)	GALNT12 (ENSSFOG00015011438)	poc1bl (ENSSFOG00015011525)	si:dkey-184p18.2 (ENSSFOG00015025484)	rp9 (ENSSFOG00015032725)	ELMO1 (ENSSFOG00015011599)	pex1 (ENSSFOG00015011673) #28	rbm48 (ENSSFOG00015031250) #27	efcab1 (ENSSFOG00015011704)	ENSSFOG00015011745	FAM133B (ENSSFOG00015011791) #25	cdk6 (ENSSFOG00015011807) #23	hepacam2 (ENSSFOG00015025189) #22	VPS50 (ENSSFOG00015011864) #21	CALCR (ENSSFOG00015012033) #20	tfpi2 (ENSSFOG00015012284) #19	gngt1 (ENSSFOG00015012354) #17	zgc:85777 (ENSSFOG00015012381)	bet1 (ENSSFOG00015033210)	col1a2 (ENSSFOG00015012447) #15	casd1 (ENSSFOG00015012558) #14	sgce (ENSSFOG00015012609) #13	PPP1R9A (ENSSFOG00015012671) #11	asb4 (ENSSFOG00015012693) #7	pdk4 (ENSSFOG00015012711)	DYNC1I1 (ENSSFOG00015012749)	sem1 (ENSSFOG00015028521)	dlx6a (ENSSFOG00015012790)
Clupeocephala	ANCESTRAL SPECIES	40	ENSGT00940000155783	ENSGT00940000171718	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Otomorpha	ANCESTRAL SPECIES	139	ENSGT00940000155783	ENSGT00940000171718	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Clupeiformes	ANCESTRAL SPECIES	15	ENSGT01030000234543.F	ENSGT00450000040303	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Atlantic herring	MODERN SPECIES	10	ctnnal1 (ENSCHAG00000013363)	abitram (ENSCHAG00000013496)	elp2 (ENSCHAG00000013564)	gabbr2 (ENSCHAG00000013812)	GALNT12 (ENSCHAG00000014024)	poc1bl (ENSCHAG00000014243)	si:dkey-184p18.2 (ENSCHAG00000014527)	rp9 (ENSCHAG00000014541)	elmo1 (ENSCHAG00000014572)	pex1 (ENSCHAG00000015194) #28	rbm48 (ENSCHAG00000016032) #27	efcab1 (ENSCHAG00000016037)	ENSCHAG00000016073	cdk6 (ENSCHAG00000016088) #23	fam133b (ENSCHAG00000016118) #25	hepacam2 (ENSCHAG00000016145) #22	VPS50 (ENSCHAG00000016211) #21	CALCR (ENSCHAG00000017530) #20	tfpi2 (ENSCHAG00000018479) #19	zgc:85777 (ENSCHAG00000018489)	bet1 (ENSCHAG00000018586)	ENSCHAG00000018627	col1a2 (ENSCHAG00000018665) #15	casd1 (ENSCHAG00000019396) #14	ENSCHAG00000019447	ENSCHAG00000019459	scn1bb (ENSCHAG00000019476)	ENSCHAG00000019480	ENSCHAG00000019491	ENSCHAG00000019506	SYNGAP1 (ENSCHAG00000019776)
Denticle herring	MODERN SPECIES	12	abitram (ENSDCDG00000034562)	elp2 (ENSDCDG00000034547)	gabbr2 (ENSDCDG00000034542)	GALNT12 (ENSDCDG00000034533)	poc1bl (ENSDCDG00000034516)	ENSDCDG00000034514	si:dkey-184p18.2 (ENSDCDG00000034512)	rp9 (ENSDCDG00000034510)	elmo1 (ENSDCDG00000034140)	pex1 (ENSDCDG00000034110) #28	rbm48 (ENSDCDG00000034101) #27	efcab1 (ENSDCDG00000034098)	ENSDCDG00000034096	cdk6 (ENSDCDG00000034093) #23	fam133b (ENSDCDG00000034091) #25	hepacam2 (ENSDCDG00000034090) #22	VPS50 (ENSDCDG00000033463) #21	CALCR (ENSDCDG00000032662) #20	tfpi2 (ENSDCDG00000032630) #19	gngt1 (ENSDCDG00000032628) #17	zgc:85777 (ENSDCDG00000032568)	bet1 (ENSDCDG00000032564)	ENSDCDG00000032562	col1a2 (ENSDCDG00000032255) #15	casd1 (ENSDCDG00000032234) #14	sgce (ENSDCDG00000031897) #13	PPP1R9A (ENSDCDG00000031664) #11	asb4 (ENSDCDG00000031641) #7	pdk4 (ENSDCDG00000030640)	DYNC1I1 (ENSDCDG00000029921)	SLC25A13 (ENSDCDG00000029510)
Otophysi	ANCESTRAL SPECIES	108	ENSGT00940000155783	ENSGT00940000171718	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Characiphysae	ANCESTRAL SPECIES	10	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a.m.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Channel catfish	MODERN SPECIES	16	elp2 (ENSIPUG00000022542)	gabbr2 (ENSIPUG00000022556)	galnt12 (ENSIPUG00000022576)	poc1bl (ENSIPUG00000022582)	c24h18orf21 (ENSIPUG00000022595)	rp9 (ENSIPUG00000022601)	Elmo1 (ENSIPUG00000022619)	pex1 (ENSIPUG00000022652) #28	rbm48 (ENSIPUG00000022664) #27	efcab1 (ENSIPUG00000022670)	ENSIPUG00000022692	ENSIPUG00000022703	ENSIPUG00000022706	CDK6 (ENSIPUG00000022712) #23	fam133b (ENSIPUG00000022720) #25	hepacam2 (ENSIPUG00000022724) #22	vps50 (ENSIPUG00000022745) #21	CALCR (ENSIPUG00000022778) #20	tfpi2 (ENSIPUG00000022790) #19	gngt1 (ENSIPUG00000022794) #17	zgc:85777 (ENSIPUG00000022802)	bet1 (ENSIPUG00000022823)	col1a2 (ENSIPUG00000022834) #15	ENSIPUG00000023001	casd1 (ENSIPUG00000023006) #14	sgce (ENSIPUG00000023027) #13	PPP1R9A (ENSIPUG00000023042) #11	asb4 (ENSIPUG00000023062) #7	pdk4 (ENSIPUG00000023063)	dync1i1 (ENSIPUG00000023073)	ENSIPUG00000023105
Characiphysae_b	ANCESTRAL SPECIES	1	ENSGT01030000234543.F	ENSGT00450000040303	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a.m.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Characoidei	ANCESTRAL SPECIES	3	ENSGT01030000234543.F	ENSGT00450000040303	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a.m.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Red-bellied piranha	MODERN SPECIES	1	ctnnal1 (ENSPNAG00000008057)	abitram (ENSPNAG00000000610)	elp2 (ENSPNAG00000008026)	gabbr2 (ENSPNAG00000008004)	GALNT12 (ENSPNAG00000004751)	poc1bl (ENSPNAG00000007977)	si:dkey-184p18.2 (ENSPNAG00000004802)	rp9 (ENSPNAG00000007963)	elmo1 (ENSPNAG00000007948)	pex1 (ENSPNAG00000000530) #28	rbm48 (ENSPNAG00000000520) #27	efcab1 (ENSPNAG00000007858)	ENSPNAG00000000518	cdk6 (ENSPNAG00000000510) #23	fam133b (ENSPNAG00000000501) #25	hepacam2 (ENSPNAG00000000492) #22	VPS50 (ENSPNAG00000006716) #21	CALCR (ENSPNAG00000000459) #20	tfpi2 (ENSPNAG00000007767) #19	gngt1 (ENSPNAG00000006582) #17	zgc:85777 (ENSPNAG00000005003)	bet1 (ENSPNAG00000029605)	col1a2 (ENSPNAG00000029588) #15	casd1 (ENSPNAG00000029564) #14	sgce (ENSPNAG00000005835) #13	PPP1R9A (ENSPNAG00000006400) #11	asb4 (ENSPNAG00000029289) #7	pdk4 (ENSPNAG00000029281)	DYNC1I1 (ENSPNAG00000029224)	SLC25A13 (ENSPNAG00000029120)	ENSPNAG00000006396
Mexicana tetra	MODERN SPECIES	15	ctnnal1 (ENSAMXG00000003430)	abitram (ENSAMXG00000032707)	elp2 (ENSAMXG00000003453)	gabbr2 (ENSAMXG00000003507)	GALNT12 (ENSAMXG00000030700)	poc1bl (ENSAMXG00000003530)	si:dkey-184p18.2 (ENSAMXG00000003545)	rp9 (ENSAMXG00000038776)	elmo1 (ENSAMXG00000003570)	pex1 (ENSAMXG00000014209) #28	rbm48 (ENSAMXG00000035300) #27	efcab1 (ENSAMXG00000029482)	ENSAMXG00000014237	cdk6 (ENSAMXG00000014264) #23	fam133b (ENSAMXG00000038416) #25	hepacam2 (ENSAMXG00000014291) #22	VPS50 (ENSAMXG00000014299) #21	CALCR (ENSAMXG00000014320) #20	ENSAMXG00000035288	tfpi2 (ENSAMXG00000014363) #19	gngt1 (ENSAMXG00000014381) #17	zgc:85777 (ENSAMXG00000037869)	bet1 (ENSAMXG00000014416)	col1a2 (ENSAMXG00000021065) #15	ENSAMXG00000033282	casd1 (ENSAMXG00000014424) #14	sgce (ENSAMXG00000014430) #13	PPP1R9A (ENSAMXG00000014444) #11	asb4 (ENSAMXG00000029158) #7	pdk4 (ENSAMXG00000036789)	DYNC1I1 (ENSAMXG00000014523)
Electric eel	MODERN SPECIES	179								elmo1 (ENSEEEG00000020647)	pex1 (ENSEEEG00000020649) #28	rbm48 (ENSEEEG00000020652) #27	efcab1 (ENSEEEG00000020653)	ENSEEEG00000020654	ENSEEEG00000020655	cdk6 (ENSEEEG00000020659) #23	fam133b (ENSEEEG00000020660) #25	hepacam2 (ENSEEEG00000020662) #22	VPS50 (ENSEEEG00000020678) #21	CALCR (ENSEEEG00000021196) #20	ENSEEEG00000021197 #20	tfpi2 (ENSEEEG00000021198) #19	gngt1 (ENSEEEG00000021199) #17	zgc:85777 (ENSEEEG00000021202)	bet1 (ENSEEEG00000021204)	col1a2 (ENSEEEG00000021238) #15	casd1 (ENSEEEG00000021675) #14	sgce (ENSEEEG00000021730) #13	PPP1R9A (ENSEEEG00000021807) #11	asb4 (ENSEEEG00000021941) #7	pdk4 (ENSEEEG00000021944)	DYNC1I1 (ENSEEEG00000022001)	SLC25A13 (ENSEEEG00000022012)
Cyprinoidei	ANCESTRAL SPECIES	15	ENSGT00950000182883.a.b.a	ENSGT00940000156923	ENSGT00940000158387	ENSGT00940000161290	ENSGT00940000158302.d.b	ENSGT00940000160103	ENSGT00940000156221	ENSGT00940000166582.e	ENSGT00940000166582.f	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00940000157957 #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	59														ENSGT00470000042293.a.a.i.a.a	ENSGT00940000157957.h #23	ENSGT01100000263551.b.b.b.a #22	ENSGT00390000003442.b #21	ENSGT00940000155380.d.a #20	ENSGT00940000159917.a #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410.b	ENSGT00940000163414.d	ENSGT00940000155639.w.b #15	ENSGT00390000004037.k #14	ENSGT00390000005672.a.b.h #13	ENSGT00940000155538.a #11	ENSGT00940000158874.d #7	ENSGT01030000234646.B.a.a.a.b.f	ENSGT00940000156032.`b.b.b.d	ENSGT00940000159344.i	ENSGT00940000162732
Goldfish	MODERN SPECIES	10	nxph1 (ENSCARG00000027494)	phf14 (ENSCARG00000027215)	smap2 (ENSCARG00000027176)	ENSCARG00000027141	ADGRB2 (ENSCARG00000026863)	ENSCARG00000026836	ENSCARG00000026832	sfpq (ENSCARG00000026786)	ENSCARG00000026771	zmym4.1 (ENSCARG00000026488)	rbm48 (ENSCARG00000026448) #27	efcab1 (ENSCARG00000026438)	ENSCARG00000026431	ENSCARG00000026422	cdk6 (ENSCARG00000026410) #23	hepacam2 (ENSCARG00000026397) #22	VPS50 (ENSCARG00000024902) #21	CALCR (ENSCARG00000024605) #20	tfpi2 (ENSCARG00000024572) #19	gngt1 (ENSCARG00000024567) #17	bet1 (ENSCARG00000052429)	zgc:85777 (ENSCARG00000052278)	col1a2 (ENSCARG00000051222) #15	casd1 (ENSCARG00000050967) #14	sgce (ENSCARG00000050615) #13	PPP1R9A (ENSCARG00000050506) #11	pdk4 (ENSCARG00000049871)	SLC25A13 (ENSCARG00000049510)	sem1 (ENSCARG00000049437)	DLX6 (ENSCARG00000049406)	dlx5a (ENSCARG00000049385)
Cyprininae_a	ANCESTRAL SPECIES	1	ENSGT00940000155427.b.a	ENSGT00950000182883.a.b.a.i	ENSGT00940000156923.l	ENSGT00940000158387.e	ENSGT00940000161290.a	ENSGT00940000160103.k.b	ENSGT00940000160103.l	ENSGT00940000156221.u	ENSGT00940000166582.e.b	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a.i.b	ENSGT00470000042293.a.a.i.a.a	ENSGT00940000157957.h #23	ENSGT00730000111097.c #25	ENSGT01100000263551.b.b.b.a #22	ENSGT00390000003442.b #21	ENSGT00940000155380.d.a #20	ENSGT00940000159917.a #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410.b	ENSGT00940000163414.d	ENSGT00940000155639.w.b #15	ENSGT00390000004037.k #14	ENSGT00390000005672.a.b.h #13	ENSGT00940000155538.a #11	ENSGT00940000158874.d #7	ENSGT01030000234646.B.a.a.a.b.f	ENSGT00940000156032.`b.b.b.d	ENSGT00940000159344.i	ENSGT00940000162732
Common carp reference	MODERN SPECIES	12	nxph1 (ENSCCRG00000073715)	ENSCCRG00000060571	phf14 (ENSCCRG00000002254)	smap2 (ENSCCRG00000067242)	col9a2 (ENSCCRG00000025892)	ENSCCRG00000065536	ENSCCRG00000078694	ENSCCRG00000053160	sfpq (ENSCCRG00000002195)	zmym4.1 (ENSCCRG00000002250)	zmym4.2 (ENSCCRG00000077776)	rbm48 (ENSCCRG00000002232) #27	efcab1 (ENSCCRG00000002225)	ENSCCRG00000031642	fam133b (ENSCCRG00000050175) #25	hepacam2 (ENSCCRG00000050180) #22	VPS50 (ENSCCRG00000054843) #21	ENSCCRG00000048672 #20	tfpi2 (ENSCCRG00000048504) #19	bet1 (ENSCCRG00000081813)	zgc:85777 (ENSCCRG00000055868)	col1a2 (ENSCCRG00000072549) #15	casd1 (ENSCCRG00000004560) #14	sgce (ENSCCRG00000004691) #13	PPP1R9A (ENSCCRG00000004980) #11	pdk4 (ENSCCRG00000005131)	ENSCCRG00000002811	ENSCCRG00000062008	SLC25A13 (ENSCCRG00000005167)	sem1 (ENSCCRG00000035802)	DLX6 (ENSCCRG00000035836)
Golden-line barbel	MODERN SPECIES	1199												ENSSGRG00000017501	ENSSGRG00000017500	cdk6 (ENSSGRG00000017471) #23	fam133b (ENSSGRG00000017470) #25	hepacam2 (ENSSGRG00000017469) #22	VPS50 (ENSSGRG00000017465) #21	ENSSGRG00000017460 #20	CALCR (ENSSGRG00000017459) #20	ENSSGRG00000017458
Cyprininae	ANCESTRAL SPECIES	97	ENSGT00940000155427.b.a	ENSGT00950000182883.a.b.a.i	ENSGT00940000156923.l	ENSGT00940000158387.e	ENSGT00940000161290.a	ENSGT00940000160103.k.b	ENSGT00940000158302.d.b.d	ENSGT00940000160103.l	ENSGT00940000156221.u	ENSGT00940000166582.e.b	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a.j	ENSGT00940000157957.i #23	ENSGT00730000111097 #25	ENSGT01100000263551.b.b.b.b #22	ENSGT00390000003442.a #21	ENSGT00940000155380.d.b #20	ENSGT00940000159917.b #19	ENSGT00940000164410.a	ENSGT00940000163414.c	ENSGT00940000155639.w.a #15	ENSGT00390000004037.l #14	ENSGT00390000005672.a.b.g #13	ENSGT00940000155538.b #11	ENSGT00940000158874.c #7	ENSGT01030000234646.B.a.a.a.b.e	ENSGT00940000156032.`b.b.b.c	ENSGT00940000159344.j	ENSGT00940000157683.a	ENSGT00940000159188.g
Cyprininae_a	ANCESTRAL SPECIES	124									ENSGT00940000156221.v	ENSGT00940000166582.e.a	ENSGT00940000166582.f.a	ENSGT01030000235604.a	ENSGT00470000042293.a.a.j	ENSGT00940000157957.i #23	ENSGT00730000111097.d #25	ENSGT01100000263551.b.b.b.b #22	ENSGT00390000003442.a #21	ENSGT00940000155380.d.b #20	ENSGT00940000159917.b #19	ENSGT00940000164410.a	ENSGT00940000163414.c	ENSGT00940000155639.w.a #15	ENSGT00390000004037.l #14	ENSGT00390000005672.a.b.g #13	ENSGT00940000155538.b #11	ENSGT00940000158874.c #7	ENSGT01030000234646.B.a.a.a.b.e	ENSGT00940000156032.`b.b.b.c	ENSGT00940000159344.j	ENSGT00940000157683.a	ENSGT00940000159188.g
Common carp reference	MODERN SPECIES	31	smap2 (ENSCCRG00000059815)	col9a2 (ENSCCRG00000060116)	ENSCCRG00000082445	ENSCCRG00000073935	sfpq (ENSCCRG00000003778)	ENSCCRG00000074081	zmym4.1 (ENSCCRG00000040905)	zmym4.2 (ENSCCRG00000013520)	ENSCCRG00000040888	rbm48 (ENSCCRG00000040886) #27	ENSCCRG00000040878	ENSCCRG00000040863	ENSCCRG00000075521	cdk6 (ENSCCRG00000057262) #23	fam133b (ENSCCRG00000013564) #25	hepacam2 (ENSCCRG00000013567) #22	VPS50 (ENSCCRG00000027124) #21	CALCR (ENSCCRG00000013584) #20	gngt1 (ENSCCRG00000061382) #17	tfpi2 (ENSCCRG00000044569) #19	zgc:85777 (ENSCCRG00000004502)	bet1 (ENSCCRG00000065995)	col1a2 (ENSCCRG00000013700) #15	ENSCCRG00000077343	casd1 (ENSCCRG00000021627) #14	sgce (ENSCCRG00000021623) #13	PPP1R9A (ENSCCRG00000066506) #11	asb4 (ENSCCRG00000037338) #7	pdk4 (ENSCCRG00000037357)	DYNC1I1 (ENSCCRG00000040559)	SLC25A13 (ENSCCRG00000064911)
Golden-line barbel	MODERN SPECIES	648							sfpq (ENSSGRG00000044939)	zmym4.1 (ENSSGRG00000044943)	ENSSGRG00000001192	ENSSGRG00000001198	ENSSGRG00000001222	efcab1 (ENSSGRG00000001230)	ENSSGRG00000001286	cdk6 (ENSSGRG00000001295) #23	fam133b (ENSSGRG00000001443) #25	hepacam2 (ENSSGRG00000001447) #22	VPS50 (ENSSGRG00000001542) #21	CALCR (ENSSGRG00000004685) #20	tfpi2 (ENSSGRG00000005804) #19	zgc:85777 (ENSSGRG00000005808)	bet1 (ENSSGRG00000005861)
Goldfish	MODERN SPECIES	38				stm (ENSCARG00000024885)	si:ch211-80h18.1 (ENSCARG00000024899)	hsf1 (ENSCARG00000024926)	bop1 (ENSCARG00000024996)	scxa (ENSCARG00000025677)	ADGRB2 (ENSCARG00000025725)	sfpq (ENSCARG00000026235)	zmym4.1 (ENSCARG00000026353)	ENSCARG00000026854	ENSCARG00000026869	cdk6 (ENSCARG00000026894) #23	fam133b (ENSCARG00000026900) #25	hepacam2 (ENSCARG00000026922) #22	VPS50 (ENSCARG00000027092) #21	CALCR (ENSCARG00000028273) #20	tfpi2 (ENSCARG00000029059) #19	gngt1 (ENSCARG00000029067) #17	bet1 (ENSCARG00000029137)	col1a2 (ENSCARG00000029332) #15	casd1 (ENSCARG00000033265) #14	sgce (ENSCARG00000033350) #13	PPP1R9A (ENSCARG00000033588) #11	asb4 (ENSCARG00000034152) #7	pdk4 (ENSCARG00000034264)	DYNC1I1 (ENSCARG00000035460)	SLC25A13 (ENSCARG00000039810)	sem1 (ENSCARG00000046014)	dlx6a (ENSCARG00000046037)
Zebrafish	MODERN SPECIES	10	smap2 (ENSDARG00000061446)	col9a2 (ENSDARG00000024492)	ENSDARG00000009194	ENSDARG00000025667	sfpq (ENSDARG00000011564)	zmym4.1 (ENSDARG00000035823)	zmym4.2 (ENSDARG00000035821)	illr4 (ENSDARG00000008075)	ENSDARG00000116443	rbm48 (ENSDARG00000033754) #27	efcab1 (ENSDARG00000061377)	grna.1 (ENSDARG00000089362)	grna.2 (ENSDARG00000088641)	cdk6 (ENSDARG00000070228) #23	fam133b (ENSDARG00000013863) #25	hepacam2 (ENSDARG00000061365) #22	VPS50 (ENSDARG00000096912) #21	VPS50 (ENSDARG00000002880) #21	CALCR (ENSDARG00000028845) #20	ENSDARG00000070215	tfpi2 (ENSDARG00000061351) #19	gngt1 (ENSDARG00000035798) #17	zgc:85777 (ENSDARG00000027009)	bet1 (ENSDARG00000034885)	ENSDARG00000094634	col1a2 (ENSDARG00000020007) #15	casd1 (ENSDARG00000023900) #14	sgce (ENSDARG00000012138) #13	PPP1R9A (ENSDARG00000061304) #11	asb4 (ENSDARG00000034988) #7	pdk4 (ENSDARG00000054848)
Euteleosteomorpha	ANCESTRAL SPECIES	47	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Protacanthopterygii	ANCESTRAL SPECIES		ENSGT00390000000916	ENSGT01000000216370	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000163607	ENSGT00390000013383	ENSGT00940000162490.d	ENSGT00940000162490.c	ENSGT00940000155994	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.a.b	ENSGT00940000156032.`b.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	601				ENSGT00940000155783.q.a	ENSGT00940000157173.d.a	ENSGT00940000163607.f	ENSGT00940000165672.q	ENSGT00940000162490.c	ENSGT00940000155994.i.a.b	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968.j	ENSGT00470000042293.a.a	ENSGT00730000111097.a #25	ENSGT00940000157957.j.b #23	ENSGT01100000263551.b.b.b.c #22	ENSGT00390000003442.i.b #21	ENSGT00940000155380.td #20	ENSGT00940000177895
Huchen	MODERN SPECIES	1974																hepacam2 (ENSHHUG00000000209) #22	VPS50 (ENSHHUG00000000063) #21
Salmoninae_a	ANCESTRAL SPECIES	5	ENSGT00450000040303.u.a	ENSGT01030000234543.F.c.a	ENSGT01000000216370	ENSGT00940000155783.q.a	ENSGT00940000157173.d.a	ENSGT00940000163607.f	ENSGT00940000165672.q	ENSGT00940000162490.c	ENSGT00940000155994.i.a.b	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968.j	ENSGT00470000042293.a.a	ENSGT00730000111097.a #25	ENSGT00940000157957.j.b #23	ENSGT01100000263551.b.b.b.c #22	ENSGT00390000003442.i.b #21	ENSGT00940000155380.td #20	ENSGT00940000177895	ENSGT00940000159917.d #19	ENSGT00990000204445.a.c	ENSGT00940000164410.e	ENSGT00940000163414.e	ENSGT00940000155639.p.a #15	ENSGT00390000004037.m #14	ENSGT00390000005672.a.b.b #13	ENSGT00940000155538.d.a #11	ENSGT01030000234646.B.a.a.a.b.h	ENSGT00940000156032.`b.b.a.a	ENSGT00940000159344.l	ENSGT00940000162732.a
Salmo	ANCESTRAL SPECIES	2	ENSGT00450000040303.v	ENSGT01030000234543.F.c.a	ENSGT01000000216370	ENSGT00940000155783.q.a	ENSGT00940000157173.d.a	ENSGT00940000163607.f	ENSGT00940000165672.q	ENSGT00940000162490.c	ENSGT00940000155994.i.a.b	ENSGT00550000075032 #28	ENSGT00390000004541.k #27	ENSGT00940000159968.j	ENSGT00470000042293.a.a	ENSGT00730000111097.a #25	ENSGT00940000157957.j.b #23	ENSGT01100000263551.b.b.b.c #22	ENSGT00390000003442.i.b #21	ENSGT00940000155380.td #20	ENSGT00940000177895	ENSGT00940000159917.d #19	ENSGT00990000204445.a.c	ENSGT00940000164410.e	ENSGT00940000163414.e	ENSGT00940000155639.p.a #15	ENSGT00390000004037.m #14	ENSGT00390000005672.a.b.b #13	ENSGT00940000155538.d.a #11	ENSGT01030000234646.B.a.a.a.b.h	ENSGT01030000234646.B.a.a.a.b.g.a.b	ENSGT00940000156032.`b.b.a.a	ENSGT00940000159344.l
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000087430	ENSSSAG00000108698	gabbr2 (ENSSSAG00000010191)	ENSSSAG00000048462	ENSSSAG00000013052	poc1bl (ENSSSAG00000014518)	ENSSSAG00000101657	ENSSSAG00000115353	rp9 (ENSSSAG00000014980)	ENSSSAG00000015253	pex1 (ENSSSAG00000015786) #28	rbm48 (ENSSSAG00000021695) #27	ENSSSAG00000096965	ENSSSAG00000023344	F133 (ENSSSAG00000023617) #25	hepacam2 (ENSSSAG00000112661) #22	vps50 (ENSSSAG00000027129) #21	CALCR (ENSSSAG00000045529) #20	ENSSSAG00000109287	tfpi2 (ENSSSAG00000046914) #19	ENSSSAG00000046920	zgc:85777 (ENSSSAG00000046931)	bet1 (ENSSSAG00000084047)	col1a2 (ENSSSAG00000046988) #15	casd1 (ENSSSAG00000094782) #14	sgce (ENSSSAG00000047882) #13	PPP1R9A (ENSSSAG00000053010) #11	pdk4 (ENSSSAG00000053275)	DYNC1I1 (ENSSSAG00000054789)	SLC25A13 (ENSSSAG00000055623)	dlx6a (ENSSSAG00000100413)
Oncorhynchus	ANCESTRAL SPECIES	16	ENSGT00450000040303.u.a	ENSGT01030000234543.F.c.a	ENSGT01000000216370	ENSGT00940000155783.q.a	ENSGT00940000157173.d.a	ENSGT00940000163607.f	ENSGT00940000165672.q	ENSGT00940000162490.c	ENSGT00940000155994.i.a.b	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968.j	ENSGT00470000042293.a.a	ENSGT00730000111097.a #25	ENSGT00940000157957.j.b #23	ENSGT01100000263551.b.b.b.c #22	ENSGT00390000003442.i.b #21	ENSGT00940000155380.td #20	ENSGT00940000159917.d #19	ENSGT00990000204445.a.c	ENSGT00940000164410.e	ENSGT00940000163414.e	ENSGT00940000155639.p.a #15	ENSGT00390000004037.m #14	ENSGT00390000005672.a.b.b #13	ENSGT00940000155538.d.a #11	ENSGT01030000234646.B.a.a.a.b.h	ENSGT00940000156032.`b.b.a.a	ENSGT00940000159344.l	ENSGT00940000162732.a	ENSGT00940000157683.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00450000040303.u.a	ENSGT01030000234543.F.c.a	ENSGT01000000216370	ENSGT00940000155783.q.a	ENSGT00940000157173.d.a	ENSGT00940000163607.f	ENSGT00940000165672.q	ENSGT00940000162490.c	ENSGT00940000155994.i.a.b	ENSGT00550000075032 #28	ENSGT00390000004541 #27	ENSGT00940000159968.j	ENSGT00470000042293.a.a	ENSGT00730000111097.a #25	ENSGT00940000157957.j.b #23	ENSGT01100000263551.b.b.b.c #22	ENSGT00390000003442.i.b #21	ENSGT00940000155380.td #20	ENSGT00940000159917.d #19	ENSGT00990000204445.a.c	ENSGT00940000164410.e	ENSGT00940000163414.e	ENSGT00940000155639.p.a #15	ENSGT00390000004037.m #14	ENSGT00390000005672.a.b.b #13	ENSGT00940000155538.d.a #11	ENSGT01030000234646.B.a.a.a.b.h	ENSGT00940000156032.`b.b.a.a	ENSGT00940000159344.l	ENSGT00940000162732.a	ENSGT00940000157683.e.b
Chinook salmon	MODERN SPECIES	24	ENSOTSG00005005490	gabbr2 (ENSOTSG00005005471)	ENSOTSG00005005469 ##12	poc1bl (ENSOTSG00005005290)	ENSOTSG00005005288	ENSOTSG00005005285	rp9 (ENSOTSG00005005283)	ENSOTSG00005005282	elmo1 (ENSOTSG00005004313)	pex1 (ENSOTSG00005003003) #28	rbm48 (ENSOTSG00005002883) #27	efcab1 (ENSOTSG00005002872)	ENSOTSG00005002864	fam133b (ENSOTSG00005002857) #25	cdk6 (ENSOTSG00005002850) #23	hepacam2 (ENSOTSG00005002840) #22	VPS50 (ENSOTSG00005002823) #21	fbxl2 (ENSOTSG00005002807)	ENSOTSG00005002800	ENSOTSG00005002791	bcl11ba (ENSOTSG00005002700)	ENSOTSG00005014891 #21	CALCR (ENSOTSG00005014273) #20	tfpi2 (ENSOTSG00005014265) #19	ENSOTSG00005014264	zgc:85777 (ENSOTSG00005014256)	bet1 (ENSOTSG00005014255)	col1a2 (ENSOTSG00005014170) #15	casd1 (ENSOTSG00005014106) #14	PPP1R9A (ENSOTSG00005014092) #11	pdk4 (ENSOTSG00005014008)
Coho salmon	MODERN SPECIES	5	ENSOKIG00005009477	gabbr2 (ENSOKIG00005009485)	ENSOKIG00005009563	poc1bl (ENSOKIG00005009633)	ENSOKIG00005009649	ENSOKIG00005009658	rp9 (ENSOKIG00005009669)	ELMO1 (ENSOKIG00005009843)	ENSOKIG00005013469	pex1 (ENSOKIG00005013522) #28	rbm48 (ENSOKIG00005013948) #27	efcab1 (ENSOKIG00005013953)	ENSOKIG00005013964	fam133b (ENSOKIG00005013968) #25	cdk6 (ENSOKIG00005013975) #23	hepacam2 (ENSOKIG00005013987) #22	VPS50 (ENSOKIG00005014144) #21	CALCR (ENSOKIG00005016731) #20	ENSOKIG00005016828	tfpi2 (ENSOKIG00005016834) #19	ENSOKIG00005016849	zgc:85777 (ENSOKIG00005016852)	bet1 (ENSOKIG00005016870)	col1a2 (ENSOKIG00005016895) #15	casd1 (ENSOKIG00005017012) #14	sgce (ENSOKIG00005017074) #13	PPP1R9A (ENSOKIG00005017199) #11	pdk4 (ENSOKIG00005017274)	DYNC1I1 (ENSOKIG00005017639)	SLC25A13 (ENSOKIG00005021085)	sem1 (ENSOKIG00005021358)
Rainbow trout	MODERN SPECIES	24	ENSOMYG00000055180	gabbr2 (ENSOMYG00000016401)	ENSOMYG00000016329	poc1bl (ENSOMYG00000016312)	ENSOMYG00000016302	rp9 (ENSOMYG00000016290)	ENSOMYG00000053036	ENSOMYG00000068424	ENSOMYG00000016008	pex1 (ENSOMYG00000015768) #28	rbm48 (ENSOMYG00000015989) #27	ENSOMYG00000015981	ENSOMYG00000015975	ENSOMYG00000066650 #25	CDK6 (ENSOMYG00000015710) #23	hepacam2 (ENSOMYG00000015694) #22	ENSOMYG00000051035	VPS50 (ENSOMYG00000015474) #21	ENSOMYG00000068322	CALCR (ENSOMYG00000014069) #20	tfpi2 (ENSOMYG00000013946) #19	ENSOMYG00000060307	zgc:85777 (ENSOMYG00000013909)	bet1 (ENSOMYG00000061160)	col1a2 (ENSOMYG00000013646) #15	casd1 (ENSOMYG00000013526) #14	sgce (ENSOMYG00000013169) #13	PPP1R9A (ENSOMYG00000013088) #11	ENSOMYG00000062374	pdk4 (ENSOMYG00000013044)	DYNC1I1 (ENSOMYG00000012273)
Salmoninae	ANCESTRAL SPECIES	48	ENSGT00940000158587.c.b.e	ENSGT00940000159104.c.f	ENSGT00450000040303.u.b	ENSGT01030000234543.F.c.b	ENSGT00390000000916	ENSGT00940000155783.q.b	ENSGT00940000157173.d.b	ENSGT00940000163607.e	ENSGT00390000013383	ENSGT00940000162490.d	ENSGT00940000155994.i.a.a	ENSGT00940000159968.i	ENSGT00940000177254	ENSGT00730000111097.b #25	ENSGT00940000157957.j.a #23	ENSGT01100000263551.b.b.b.d #22	ENSGT00390000003442.i.a #21	ENSGT00940000155380.ud #20	ENSGT00940000159917.c #19	ENSGT00990000204445.a.d	ENSGT00940000164410.f	ENSGT00940000175665	ENSGT00940000163414.f	ENSGT00940000155639.p.b #15	ENSGT00390000004037.n #14	ENSGT00390000005672.a.b.a #13	ENSGT00940000155538.d.b #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b.g.b	ENSGT00940000156032.`b.b.b	ENSGT01030000234646.B.a.a.a.b.g.a.a
Huchen	MODERN SPECIES	885									si:dkey-184p18.2 (ENSHHUG00000026622)	ENSHHUG00000026631	rp9 (ENSHHUG00000026633)	elmo1 (ENSHHUG00000026646)	efcab1 (ENSHHUG00000026991)	ENSHHUG00000027046 #25	cdk6 (ENSHHUG00000027049) #23	hepacam2 (ENSHHUG00000027056) #22
Salmoninae_a	ANCESTRAL SPECIES	28	ENSGT00940000158587.c.b.e	ENSGT00940000159104.c.f	ENSGT00450000040303.u.b	ENSGT01030000234543.F.c.b	ENSGT00390000000916	ENSGT00940000155783.q.b	ENSGT00940000157173.d.b	ENSGT00940000163607.e	ENSGT00390000013383	ENSGT00940000162490.d	ENSGT00940000155994.i.a.a	ENSGT00940000159968.i	ENSGT00940000177254	ENSGT00730000111097.b #25	ENSGT00940000157957.j.a #23	ENSGT01100000263551.b.b.b.d #22	ENSGT00390000003442.i.a #21	ENSGT00940000155380.ud #20	ENSGT00940000159917.c #19	ENSGT00990000204445.a.d.a	ENSGT00940000164410.f	ENSGT00940000163414.f	ENSGT00940000155639.p.b #15	ENSGT00390000004037.n #14	ENSGT00390000005672.a.b.a #13	ENSGT00940000155538.d.b #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b.g.b	ENSGT00940000156032.`b.b.b	ENSGT01030000234646.B.a.a.a.b.g.a.a	ENSGT00940000156032.`b.b.a.b
Salmo	ANCESTRAL SPECIES	2	ENSGT00950000182872.f.a.b.p.d	ENSGT00940000158587.c.b.e	ENSGT00940000159104.c.f	ENSGT01030000234543.F.c.b	ENSGT00390000000916	ENSGT00940000155783.q.b	ENSGT00940000157173.d.b	ENSGT00940000163607.e	ENSGT00390000013383	ENSGT00940000162490.d	ENSGT00940000155994.i.a.a	ENSGT00390000004541.l #27	ENSGT00940000159968.i	ENSGT00730000111097.b #25	ENSGT00940000157957.j.a #23	ENSGT01100000263551.b.b.b.d #22	ENSGT00390000003442.i.a.d.a #21	ENSGT00390000003442.i.a.d.b #21	ENSGT00940000155380.ud #20	ENSGT00940000159917.c #19	ENSGT00990000204445.a.d.a	ENSGT00940000164410.f	ENSGT00940000163414.f	ENSGT00940000155639.p.b #15	ENSGT00390000004037.n #14	ENSGT00390000005672.a.b.a #13	ENSGT00940000155538.d.b #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b.g.a.a	ENSGT00940000156032.`b.b.a.b	ENSGT00940000159344.k
Atlantic salmon	MODERN SPECIES	19	ENSSSAG00000094819	sla1a (ENSSSAG00000071290)	ENSSSAG00000102759	ENSSSAG00000083300	elp2 (ENSSSAG00000071114)	gabbr2 (ENSSSAG00000071063)	ENSSSAG00000071019	poc1bl (ENSSSAG00000070980)	si:dkey-184p18.2 (ENSSSAG00000070962)	ENSSSAG00000090888	rp9 (ENSSSAG00000101772)	elmo1 (ENSSSAG00000070608)	ENSSSAG00000115786	ENSSSAG00000070560 #25	CDK6 (ENSSSAG00000100175) #23	hepacam2 (ENSSSAG00000070538) #22	ENSSSAG00000099757 #21	ENSSSAG00000084488 #21	ENSSSAG00000082530	VPS50 (ENSSSAG00000070526) #21	ENSSSAG00000101087 #21	CALCR (ENSSSAG00000069062) #20	ENSSSAG00000095030 #20	TFPI2 (ENSSSAG00000069027) #19	ENSSSAG00000109521	zgc:85777 (ENSSSAG00000069007)	bet1 (ENSSSAG00000068998)	col1a2 (ENSSSAG00000067809) #15	casd1 (ENSSSAG00000067730) #14	sgce (ENSSSAG00000065720) #13	PPP1R9A (ENSSSAG00000065549) #11
River trout	MODERN SPECIES	27	sla1a (ENSSTUG00000042833)	ctnnal1 (ENSSTUG00000042556)	elp2 (ENSSTUG00000042151)	gabbr2 (ENSSTUG00000042075)	ENSSTUG00000042040	poc1bl (ENSSTUG00000042002)	si:dkey-184p18.2 (ENSSTUG00000041993)	rp9 (ENSSTUG00000041949)	elmo1 (ENSSTUG00000041481)	rbm48 (ENSSTUG00000041427) #27	efcab1 (ENSSTUG00000041406)	ENSSTUG00000041368	ENSSTUG00000041364	fam133b (ENSSTUG00000041337) #25	cdk6 (ENSSTUG00000041308) #23	hepacam2 (ENSSTUG00000041280) #22	VPS50 (ENSSTUG00000041217) #21	ENSSTUG00000041206 #21	CALCR (ENSSTUG00000039334) #20	tfpi2 (ENSSTUG00000039283) #19	ENSSTUG00000039278	zgc:85777 (ENSSTUG00000039192)	bet1 (ENSSTUG00000039181)	col1a2 (ENSSTUG00000038533) #15	casd1 (ENSSTUG00000038477) #14	sgce (ENSSTUG00000037984) #13	PPP1R9A (ENSSTUG00000037635) #11	asb4 (ENSSTUG00000037601) #7	pdk4 (ENSSTUG00000037451)	DYNC1I1 (ENSSTUG00000035595)	SLC25A13 (ENSSTUG00000035528)
Oncorhynchus	ANCESTRAL SPECIES	29	ENSGT00940000159104.c.f	ENSGT00450000040303.u.b	ENSGT01030000234543.F.c.b	ENSGT00390000000916	ENSGT00940000155783.q.b	ENSGT00940000157173.d.b	ENSGT00940000163607.e	ENSGT00390000013383	ENSGT00940000162490.d	ENSGT00940000155994.j	ENSGT00940000155994.i.a.a	ENSGT00940000159968.i	ENSGT00940000177254	ENSGT00730000111097.b #25	ENSGT00940000157957.j.a #23	ENSGT01100000263551.b.b.b.d #22	ENSGT00390000003442.i.a #21	ENSGT00940000155380.ud #20	ENSGT00940000159917.c #19	ENSGT00990000204445.a.d.a	ENSGT00940000164410.f	ENSGT00940000163414.f	ENSGT00940000155639.p.b #15	ENSGT00390000004037.n #14	ENSGT00390000005672.a.b.a #13	ENSGT00940000155538.d.b #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b.g.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344.k	ENSGT01030000234597.b.b.b.a.a.b
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000011941	elp2 (ENSOMYG00000011757)	gabbr2 (ENSOMYG00000011723)	ENSOMYG00000011664	poc1bl (ENSOMYG00000011644)	ENSOMYG00000060579	ENSOMYG00000066649	si:dkey-184p18.2 (ENSOMYG00000011632)	rp9 (ENSOMYG00000011615)	ENSOMYG00000010799	ENSOMYG00000070091	ENSOMYG00000010585	ENSOMYG00000010563	ENSOMYG00000010541 #25	CDK6 (ENSOMYG00000010534) #23	hepacam2 (ENSOMYG00000010514) #22	VPS50 (ENSOMYG00000010501) #21	CALCR (ENSOMYG00000010070) #20	ENSOMYG00000057139	ENSOMYG00000064650	tfpi2 (ENSOMYG00000009817) #19	ENSOMYG00000050742	ENSOMYG00000061536	zgc:85777 (ENSOMYG00000009783)	bet1 (ENSOMYG00000074301)	ENSOMYG00000076487	col1a2 (ENSOMYG00000009373) #15	casd1 (ENSOMYG00000008927) #14	sgce (ENSOMYG00000008795) #13	ENSOMYG00000073452	ENSOMYG00000055759
Oncorhynchus_a	ANCESTRAL SPECIES	29	ENSGT00950000182872.f.a.b.p.d	ENSGT00940000158587.c.b.e	ENSGT00940000159104.c.f	ENSGT00450000040303.u.b	ENSGT01030000234543.F.c.b	ENSGT00390000000916	ENSGT00940000155783.q.b	ENSGT00940000157173.d.b	ENSGT00940000163607.e	ENSGT00390000013383	ENSGT01000000220518	ENSGT00940000155994.i.a.a	ENSGT00940000159968.i	ENSGT00730000111097.b #25	ENSGT00940000157957.j.a #23	ENSGT01100000263551.b.b.b.d #22	ENSGT00390000003442.i.a #21	ENSGT00940000155380.ud #20	ENSGT00940000164410.f.a	ENSGT00940000175665	ENSGT00940000159917.c #19	ENSGT00990000204445.a.d.a	ENSGT00940000164410.f.b	ENSGT00940000163414.f	ENSGT00940000155639.p.b #15	ENSGT00390000004037.n #14	ENSGT00390000005672.a.b.a #13	ENSGT00940000155538.d.b #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b.g.b	ENSGT00940000156032.`b.b.b
Coho salmon	MODERN SPECIES	8	sla1a (ENSOKIG00005017657)	ENSOKIG00005017667	ctnnal1 (ENSOKIG00005017698)	elp2 (ENSOKIG00005017773)	gabbr2 (ENSOKIG00005018182)	GALNT12 (ENSOKIG00005018198)	poc1bl (ENSOKIG00005018258)	ENSOKIG00005018271	si:dkey-184p18.2 (ENSOKIG00005018275)	ENSOKIG00005018284	elmo1 (ENSOKIG00005018325)	CLXN (ENSOKIG00005018735)	ENSOKIG00005018749 #25	CDK6 (ENSOKIG00005018779) #23	ENSOKIG00005018796	hepacam2 (ENSOKIG00005018803) #22	VPS50 (ENSOKIG00005018838) #21	CALCR (ENSOKIG00005019098) #20	tfpi2 (ENSOKIG00005019676) #19	ENSOKIG00005034262	zgc:85777 (ENSOKIG00005034276)	zgc:85777 (ENSOKIG00005034350)	ENSOKIG00005034450	bet1 (ENSOKIG00005034463)	col1a2 (ENSOKIG00005034501) #15	casd1 (ENSOKIG00005035194) #14	sgce (ENSOKIG00005035273) #13	PPP1R9A (ENSOKIG00005035553) #11	asb4 (ENSOKIG00005035966) #7	pdk4 (ENSOKIG00005035985)	ENSOKIG00005036112
Chinook salmon	MODERN SPECIES	4	bop1 (ENSOTSG00005002381)	scxa (ENSOTSG00005002635)	hsf1 (ENSOTSG00005002796)	ENSOTSG00005002834	zgc:86598 (ENSOTSG00005002869)	ptp4a3a (ENSOTSG00005002908)	ndrg1a (ENSOTSG00005002933)	ccn4a (ENSOTSG00005002964)	sla1a (ENSOTSG00005002970)	abitram (ENSOTSG00005002989)	ctnnal1 (ENSOTSG00005002992)	elp2 (ENSOTSG00005003021)	GALNT12 (ENSOTSG00005003078)	si:dkey-184p18.2 (ENSOTSG00005003091)	ENSOTSG00005003095	hepacam2 (ENSOTSG00005003098) #22	ENSOTSG00005003101 #21	VPS50 (ENSOTSG00005003104) #21	zgc:85777 (ENSOTSG00005003108)	ENSOTSG00005003110	tfpi2 (ENSOTSG00005003112) #19	ENSOTSG00005003114	zgc:85777 (ENSOTSG00005003117)	bet1 (ENSOTSG00005003118)	col1a2 (ENSOTSG00005003152) #15	casd1 (ENSOTSG00005004123) #14	sgce (ENSOTSG00005004131) #13	ENSOTSG00005004804 #11	asb4 (ENSOTSG00005004806) #7	pdk4 (ENSOTSG00005004816)	ENSOTSG00005004822
Northern pike	MODERN SPECIES	9	abitram (ENSELUG00000021583)	ctnnal1 (ENSELUG00000021550)	elp2 (ENSELUG00000021466)	gabbr2 (ENSELUG00000021429)	poc1bl (ENSELUG00000021291)	si:dkey-184p18.2 (ENSELUG00000021244)	rp9 (ENSELUG00000021221)	ENSELUG00000027557	ENSELUG00000026772	elmo1 (ENSELUG00000021205)	pex1 (ENSELUG00000021152) #28	rbm48 (ENSELUG00000021132) #27	efcab1 (ENSELUG00000021131)	ENSELUG00000021116	cdk6 (ENSELUG00000020987) #23	hepacam2 (ENSELUG00000020970) #22	ENSELUG00000024685	VPS50 (ENSELUG00000020958) #21	CALCR (ENSELUG00000020617) #20	tfpi2 (ENSELUG00000020264) #19	ENSELUG00000028042	zgc:85777 (ENSELUG00000020194)	bet1 (ENSELUG00000020163)	col1a2 (ENSELUG00000020073) #15	casd1 (ENSELUG00000019997) #14	sgce (ENSELUG00000019839) #13	PPP1R9A (ENSELUG00000019810) #11	asb4 (ENSELUG00000019772) #7	pdk4 (ENSELUG00000019754)	DYNC1I1 (ENSELUG00000019661)	SLC25A13 (ENSELUG00000019498)
Acanthomorphata	ANCESTRAL SPECIES	49											ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00940000177254	ENSGT00940000177506	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00940000179331	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Tiger tail seahorse	MODERN SPECIES	390											btd (ENSHCOG00000009233)	ENSHCOG00000009261	ENSHCOG00000009282	fam133b (ENSHCOG00000009306) #25	cdk6 (ENSHCOG00000009338) #23	hepacam2 (ENSHCOG00000009343) #22	VPS50 (ENSHCOG00000009401) #21	CALCR (ENSHCOG00000009457) #20	ENSHCOG00000009479	tfpi2 (ENSHCOG00000009486) #19	gngt1 (ENSHCOG00000009519) #17	zgc:85777 (ENSHCOG00000009552)	bet1 (ENSHCOG00000000297)	col1a2 (ENSHCOG00000009651) #15	casd1 (ENSHCOG00000009695) #14
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000176107	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT00940000159108	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000157683
Aplocheiloidei	ANCESTRAL SPECIES	9	ENSGT00940000159108	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000157683
Mangrove rivulus	MODERN SPECIES	2	CDCA7L (ENSKMAG00000001697)	sp4 (ENSKMAG00000001680)	ENSKMAG00000001670	ITGB8 (ENSKMAG00000001626)	ENSKMAG00000001602	polr1f (ENSKMAG00000001591)	ENSKMAG00000001528	SNX13 (ENSKMAG00000001443)	ENSKMAG00000001416	ENSKMAG00000001403	btd (ENSKMAG00000001377)	ENSKMAG00000001209	ENSKMAG00000001179	ENSKMAG00000001165 #25	cdk6 (ENSKMAG00000001123) #23	hepacam2 (ENSKMAG00000001105) #22	VPS50 (ENSKMAG00000000934) #21	CALCR (ENSKMAG00000000807) #20	tfpi2 (ENSKMAG00000000793) #19	gngt1 (ENSKMAG00000000785) #17	zgc:85777 (ENSKMAG00000000710)	bet1 (ENSKMAG00000000756)	col1a2 (ENSKMAG00000000507) #15	casd1 (ENSKMAG00000000407) #14	sgce (ENSKMAG00000000351) #13	PPP1R9A (ENSKMAG00000000136) #11	pdk4 (ENSKMAG00000020123)	DYNC1I1 (ENSKMAG00000020066)	sem1 (ENSKMAG00000020050)	dlx6a (ENSKMAG00000020044)	dlx5a (ENSKMAG00000020028)
Turquoise killifish	MODERN SPECIES	1618	ITGB8 (ENSNFUG00015025236)	ENSNFUG00015025234	TWISTNB (ENSNFUG00015025232)	TWIST1A (ENSNFUG00015025231)	SNX13 (ENSNFUG00015025209)	ENSNFUG00015025208	ENSNFUG00015025207	C11H1ORF50 (ENSNFUG00015025205)	BTD (ENSNFUG00015025204)	ANKRD28 (ENSNFUG00015024851)	ENSNFUG00015024762	ENSNFUG00015024761	ENSNFUG00015024760	ENSNFUG00015024759 #25	cdk6 (ENSNFUG00015024758) #23	hepacam2 (ENSNFUG00015024755) #22	VPS50 (ENSNFUG00015024746) #21	ENSNFUG00015024743	ENSNFUG00015024741	CALCR (ENSNFUG00015024313) #20	CABZ01081490.1 (ENSNFUG00015024273)	TFPI2 (ENSNFUG00015024269) #19	gngt1 (ENSNFUG00015024262) #17	OLA.3715 (ENSNFUG00015024258)	bet1 (ENSNFUG00015024255)	COL1A2 (ENSNFUG00015024212) #15	CASD1 (ENSNFUG00015024188) #14	sgce (ENSNFUG00015023847) #13	ENSNFUG00015023822 #11	ENSNFUG00015023809 #11	asb4 (ENSNFUG00015023805) #7
Cyprinodontoidei	ANCESTRAL SPECIES	11	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000166841
Poeciliinae	ANCESTRAL SPECIES	18	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.q	ENSGT00390000013823.a.r	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b.h	ENSGT00940000162732	ENSGT00940000166841
Poecilia	ANCESTRAL SPECIES	24	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.q	ENSGT00390000013823.a.r.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.a.a	ENSGT00940000156032.`b.b.b.h	ENSGT00940000162732
NAME_6	ANCESTRAL SPECIES	21	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.q	ENSGT00390000013823.a.r.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.a.a
Sailfin molly	MODERN SPECIES	606											ENSPLAG00000001064	ENSPLAG00000001068	ENSPLAG00000001071	ENSPLAG00000001073 #25	cdk6 (ENSPLAG00000001075) #23	hepacam2 (ENSPLAG00000001078) #22	VPS50 (ENSPLAG00000001086) #21	ENSPLAG00000001090 #20
Amazon molly	MODERN SPECIES	273	ITGB8 (ENSPFOG00000001324)	ENSPFOG00000001178	ENSPFOG00000001131	ENSPFOG00000020055	ENSPFOG00000022793	ENSPFOG00000020053	SNX13 (ENSPFOG00000022376)	ENSPFOG00000021700	btd (ENSPFOG00000000998)	ENSPFOG00000000742	ENSPFOG00000000636	ENSPFOG00000024742	fam133b (ENSPFOG00000000621) #25	ENSPFOG00000000616	cdk6 (ENSPFOG00000000521) #23	hepacam2 (ENSPFOG00000000465) #22	ENSPFOG00000000438 #21
Guppy	MODERN SPECIES	441	sp4 (ENSPREG00000003495)	sp8a (ENSPREG00000003484)	ENSPREG00000003469	ENSPREG00000003443	ENSPREG00000003434	FERD3L (ENSPREG00000003422)	ENSPREG00000003413	SNX13 (ENSPREG00000003316)	ENSPREG00000003286	btd (ENSPREG00000003256)	btd (ENSPREG00000003210)	ENSPREG00000003055	ENSPREG00000003018	fam133b (ENSPREG00000002995) #25	cdk6 (ENSPREG00000002969) #23	hepacam2 (ENSPREG00000002947) #22	VPS50 (ENSPREG00000002804) #21	CALCR (ENSPREG00000002720) #20	tfpi2 (ENSPREG00000002710) #19	gngt1 (ENSPREG00000002684) #17	zgc:85777 (ENSPREG00000002646)	bet1 (ENSPREG00000002633)	col1a2 (ENSPREG00000002508) #15	casd1 (ENSPREG00000002427) #14	sgce (ENSPREG00000002358) #13	PPP1R9A (ENSPREG00000002304) #11	asb4 (ENSPREG00000002290) #7	DYNC1I1 (ENSPREG00000002205)	sem1 (ENSPREG00000002160)	ENSPREG00000002148	dlx6a (ENSPREG00000002135)
Platyfish	MODERN SPECIES	4	sp8a (ENSXMAG00000023039)	ITGB8 (ENSXMAG00000000593)	ENSXMAG00000000629	ENSXMAG00000023876	FERD3L (ENSXMAG00000020141)	ENSXMAG00000020142	SNX13 (ENSXMAG00000000631)	ENSXMAG00000023361	ENSXMAG00000024324	btd (ENSXMAG00000023856)	ENSXMAG00000000641	ENSXMAG00000000658	ENSXMAG00000023072	fam133b (ENSXMAG00000026042) #25	cdk6 (ENSXMAG00000026356) #23	hepacam2 (ENSXMAG00000000667) #22	VPS50 (ENSXMAG00000000669) #21	CALCR (ENSXMAG00000000680) #20	tfpi2 (ENSXMAG00000000682) #19	gngt1 (ENSXMAG00000024374) #17	bet1 (ENSXMAG00000000695)	zgc:85777 (ENSXMAG00000023712)	col1a2 (ENSXMAG00000000698) #15	casd1 (ENSXMAG00000000704) #14	sgce (ENSXMAG00000000709) #13	ENSXMAG00000022870	PPP1R9A (ENSXMAG00000000712) #11	asb4 (ENSXMAG00000000714) #7	pdk4 (ENSXMAG00000000718)	DYNC1I1 (ENSXMAG00000000722)	sem1 (ENSXMAG00000000752)
NAME_4	ANCESTRAL SPECIES	149	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.b	ENSGT00470000042293.a.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000166841
Mummichog	MODERN SPECIES	265	ENSFHEG00000013375	ITGB8 (ENSFHEG00000013355)	ENSFHEG00000013340	polr1f (ENSFHEG00000013318)	ENSFHEG00000013304	SNX13 (ENSFHEG00000013231)	ENSFHEG00000013148	btd (ENSFHEG00000013140)	btd (ENSFHEG00000013127)	ENSFHEG00000013119	ENSFHEG00000013061	ENSFHEG00000013056	ENSFHEG00000013049	FAM133B (ENSFHEG00000012981) #25	cdk6 (ENSFHEG00000012969) #23	hepacam2 (ENSFHEG00000000852) #22	VPS50 (ENSFHEG00000012916) #21	CALCR (ENSFHEG00000012667) #20	tfpi2 (ENSFHEG00000012600) #19	gngt1 (ENSFHEG00000012590) #17	zgc:85777 (ENSFHEG00000012560)	ENSFHEG00000012513
Sheepshead minnow	MODERN SPECIES	247	sp4 (ENSCVAG00000014242)	ENSCVAG00000014262	ITGB8 (ENSCVAG00000014278)	ENSCVAG00000014314	polr1f (ENSCVAG00000014324)	FERD3L (ENSCVAG00000014330)	ENSCVAG00000014337	SNX13 (ENSCVAG00000014434)	ENSCVAG00000014440	btd (ENSCVAG00000014447)	ENSCVAG00000014492	ENSCVAG00000014535	ENSCVAG00000014570	fam133b (ENSCVAG00000014580) #25	cdk6 (ENSCVAG00000014594) #23	hepacam2 (ENSCVAG00000014602) #22	VPS50 (ENSCVAG00000014679) #21	CALCR (ENSCVAG00000014852) #20	tfpi2 (ENSCVAG00000014871) #19	ENSCVAG00000014886	gngt1 (ENSCVAG00000014892) #17	zgc:85777 (ENSCVAG00000000930)	bet1 (ENSCVAG00000014948)	col1a2 (ENSCVAG00000015066) #15	casd1 (ENSCVAG00000015158) #14	sgce (ENSCVAG00000015254) #13	PPP1R9A (ENSCVAG00000015271) #11	asb4 (ENSCVAG00000015307) #7	pdk4 (ENSCVAG00000015333)	DYNC1I1 (ENSCVAG00000015382)	sem1 (ENSCVAG00000015390)
Oryzias	ANCESTRAL SPECIES	22	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.v	ENSGT00390000013823.a.u	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732
Oryzias_b	ANCESTRAL SPECIES	22	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.v	ENSGT00390000013823.a.u	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000163409
Indian medaka	MODERN SPECIES	3	sp8a (ENSOMEG00000015692)	ENSOMEG00000015733	ENSOMEG00000015748	ENSOMEG00000015759	ENSOMEG00000015768	ENSOMEG00000015805	SNX13 (ENSOMEG00000000399)	ENSOMEG00000015821	ENSOMEG00000015928	btd (ENSOMEG00000015955)	ENSOMEG00000016192	ENSOMEG00000016260	ENSOMEG00000016341 #25	ENSOMEG00000016560	cdk6 (ENSOMEG00000016622) #23	hepacam2 (ENSOMEG00000016663) #22	VPS50 (ENSOMEG00000016711) #21	CALCR (ENSOMEG00000016788) #20	tfpi2 (ENSOMEG00000016854) #19	gngt1 (ENSOMEG00000016876) #17	zgc:85777 (ENSOMEG00000016933)	bet1 (ENSOMEG00000016907)	ENSOMEG00000016940	col1a2 (ENSOMEG00000000803) #15	casd1 (ENSOMEG00000017161) #14	sgce (ENSOMEG00000017350) #13	PPP1R9A (ENSOMEG00000017415) #11	asb4 (ENSOMEG00000017453) #7	pdk4 (ENSOMEG00000017495)	DYNC1I1 (ENSOMEG00000017610)	ENSOMEG00000017662
Javanese ricefish	MODERN SPECIES	2	ENSOJAG00000015071	CDCA7L (ENSOJAG00000015035)	sp4 (ENSOJAG00000015031)	ENSOJAG00000014995	ITGB8 (ENSOJAG00000014971)	ENSOJAG00000014960	polr1f (ENSOJAG00000014951)	FERD3L (ENSOJAG00000014925)	ENSOJAG00000014918	ENSOJAG00000014891	SNX13 (ENSOJAG00000014047)	ENSOJAG00000013810	ENSOJAG00000013796	FAM133B (ENSOJAG00000013790) #25	cdk6 (ENSOJAG00000013777) #23	hepacam2 (ENSOJAG00000013705) #22	VPS50 (ENSOJAG00000013370) #21	CALCR (ENSOJAG00000011651) #20	tfpi2 (ENSOJAG00000011544) #19	gngt1 (ENSOJAG00000011527) #17	zgc:85777 (ENSOJAG00000011468)	bet1 (ENSOJAG00000011458)	ENSOJAG00000011446	col1a2 (ENSOJAG00000009445) #15	casd1 (ENSOJAG00000009202) #14	sgce (ENSOJAG00000009046) #13	PPP1R9A (ENSOJAG00000008048) #11	asb4 (ENSOJAG00000007949) #7	pdk4 (ENSOJAG00000007649)	DYNC1I1 (ENSOJAG00000007330)	ENSOJAG00000007294
Oryzias_a	ANCESTRAL SPECIES	30	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.v	ENSGT00390000013823.a.u	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000179331	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732
Chinese medaka	MODERN SPECIES	1110		ENSOSIG00000022674	CDCA7L (ENSOSIG00000022673)	sp4 (ENSOSIG00000022665)	ENSOSIG00000022657	ITGB8 (ENSOSIG00000022656)	ENSOSIG00000022654	polr1f (ENSOSIG00000022649)	FERD3L (ENSOSIG00000022641)	ENSOSIG00000022635	ENSOSIG00000022619	btd (ENSOSIG00000022618)	ENSOSIG00000022606	ENSOSIG00000022596 #25	cdk6 (ENSOSIG00000022590) #23	hepacam2 (ENSOSIG00000022587) #22	VPS50 (ENSOSIG00000022212) #21	CALCR (ENSOSIG00000022084) #20	tfpi2 (ENSOSIG00000022067) #19	gngt1 (ENSOSIG00000022064) #17	zgc:85777 (ENSOSIG00000022062)	bet1 (ENSOSIG00000022046)	ENSOSIG00000022043	col1a2 (ENSOSIG00000020542) #15	casd1 (ENSOSIG00000020418) #14	ENSOSIG00000020413 #11	ENSOSIG00000020409 #13	asb4 (ENSOSIG00000020407) #7	pdk4 (ENSOSIG00000019817)	DYNC1I1 (ENSOSIG00000016953)	sem1 (ENSOSIG00000016823)
Japanese Medaka HdrR	MODERN SPECIES	2	ENSORLG00000003978	ITGB8 (ENSORLG00000003989)	ENSORLG00000003995	polr1f (ENSORLG00000004005)	FERD3L (ENSORLG00000004008)	ENSORLG00000004012	SNX13 (ENSORLG00000004022)	ENSORLG00000023146	ENSORLG00000030568	btd (ENSORLG00000004039)	ENSORLG00000004052	ENSORLG00000004055	ENSORLG00000004062 #25	cdk6 (ENSORLG00000004090) #23	ENSORLG00000022936	hepacam2 (ENSORLG00000004092) #22	VPS50 (ENSORLG00000004143) #21	CALCR (ENSORLG00000004156) #20	tfpi2 (ENSORLG00000004168) #19	gngt1 (ENSORLG00000004180) #17	zgc:85777 (ENSORLG00000029640)	bet1 (ENSORLG00000018402)	col1a2 (ENSORLG00000004319) #15	ENSORLG00000029271	casd1 (ENSORLG00000004357) #14	sgce (ENSORLG00000004392) #13	PPP1R9A (ENSORLG00000004418) #11	asb4 (ENSORLG00000004430) #7	ENSORLG00000022924	pdk4 (ENSORLG00000004460)	DYNC1I1 (ENSORLG00000004516)
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Pomacentridae	ANCESTRAL SPECIES	7	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Pomacentridae_A	ANCESTRAL SPECIES	6	ENSGT00940000159108	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Amphiprion	ANCESTRAL SPECIES	16	ENSGT00940000159108	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Clown anemonefish	MODERN SPECIES	1356		LETM2 (ENSAOCG00000014776)	NSD3 (ENSAOCG00000001018)	plpp5 (ENSAOCG00000014915)	cdc45 (ENSAOCG00000014960)	cldn5a (ENSAOCG00000014985)	zgc:63587 (ENSAOCG00000015026)	septin5a (ENSAOCG00000015062)	ENSAOCG00000015083	dhx37 (ENSAOCG00000015168)	btd (ENSAOCG00000015181)	ENSAOCG00000001061	ENSAOCG00000015278	ENSAOCG00000015316 #25	cdk6 (ENSAOCG00000015359) #23	hepacam2 (ENSAOCG00000015393) #22	VPS50 (ENSAOCG00000015557) #21	CALCR (ENSAOCG00000015628) #20	tfpi2 (ENSAOCG00000015674) #19	gngt1 (ENSAOCG00000015711) #17	ENSAOCG00000001090	zgc:85777 (ENSAOCG00000001094)	bet1 (ENSAOCG00000015782)	col1a2 (ENSAOCG00000015957) #15
Orange clownfish	MODERN SPECIES	8	sp4 (ENSAPEG00000016605)	ENSAPEG00000016616	ITGB8 (ENSAPEG00000016631)	ENSAPEG00000016708	ENSAPEG00000016729	polr1f (ENSAPEG00000016750)	FERD3L (ENSAPEG00000016755)	ENSAPEG00000016762	SNX13 (ENSAPEG00000016852)	ENSAPEG00000017008	btd (ENSAPEG00000017026)	ENSAPEG00000017058	ENSAPEG00000017131	ENSAPEG00000017145 #25	cdk6 (ENSAPEG00000017168) #23	hepacam2 (ENSAPEG00000017198) #22	VPS50 (ENSAPEG00000017309) #21	CALCR (ENSAPEG00000017469) #20	tfpi2 (ENSAPEG00000017506) #19	gngt1 (ENSAPEG00000017540) #17	zgc:85777 (ENSAPEG00000017555)	bet1 (ENSAPEG00000017588)	col1a2 (ENSAPEG00000017655) #15	casd1 (ENSAPEG00000017804) #14	sgce (ENSAPEG00000017897) #13	PPP1R9A (ENSAPEG00000018009) #11	asb4 (ENSAPEG00000018078) #7	pdk4 (ENSAPEG00000018102)	DYNC1I1 (ENSAPEG00000018148)	SLC25A13 (ENSAPEG00000018252)	sem1 (ENSAPEG00000018314)
Spiny chromis	MODERN SPECIES	452				ENSAPOG00000011814	polr1f (ENSAPOG00000011796)	ENSAPOG00000011777	ENSAPOG00000011763	SNX13 (ENSAPOG00000011698)	ENSAPOG00000011554	btd (ENSAPOG00000011535)	ENSAPOG00000011500	ENSAPOG00000011440	ENSAPOG00000011429	ENSAPOG00000011393 #25	cdk6 (ENSAPOG00000011370) #23	hepacam2 (ENSAPOG00000011325) #22	VPS50 (ENSAPOG00000011306) #21	ENSAPOG00000011184	snx22 (ENSAPOG00000011169)	adpgk (ENSAPOG00000011148)	ppib (ENSAPOG00000011121)	OAZ2 (ENSAPOG00000011113)	psma4 (ENSAPOG00000011080)
Bicolor damselfish	MODERN SPECIES	1268											btd (ENSSPAG00000009441)	ENSSPAG00000009343	ENSSPAG00000009318	ENSSPAG00000009265 #25	cdk6 (ENSSPAG00000009221) #23	hepacam2 (ENSSPAG00000009192) #22	VPS50 (ENSSPAG00000009087) #21
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b.a	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.c.b	ENSGT00470000042293.a.a.c.a.a	ENSGT00470000042293.a.a.c.a.b	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b.a	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.c.b	ENSGT00470000042293.a.a.c.a.a	ENSGT00470000042293.a.a.c.a.b	ENSGT00940000177254	ENSGT00940000177506	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b.a	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.c.b	ENSGT00470000042293.a.a.c.a.a.b	ENSGT00470000042293.a.a.c.a.a.a	ENSGT00470000042293.a.a.c.a.b	ENSGT00940000177254	ENSGT00940000177506	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b.a	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.c.b	ENSGT00470000042293.a.a.c.a.a.b	ENSGT00470000042293.a.a.c.a.a.a	ENSGT00470000042293.a.a.c.a.b	ENSGT00940000177254	ENSGT00940000177506	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.x.b.a	ENSGT00390000013823.a.x.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a.c.b	ENSGT00470000042293.a.a.c.a.a.b	ENSGT00470000042293.a.a.c.a.a.a	ENSGT00470000042293.a.a.c.a.b	ENSGT00940000177254	ENSGT00940000177506	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Zebra mbuna	MODERN SPECIES	1104	ENSMZEG00005007575	SNX13 (ENSMZEG00005007619)	ENSMZEG00005007684	btd (ENSMZEG00005007688)	btd (ENSMZEG00005007695)	ENSMZEG00005007714	ENSMZEG00005007795	ENSMZEG00005007808	ENSMZEG00005007820	ENSMZEG00005007827	ENSMZEG00005007859	ENSMZEG00005007875	ENSMZEG00005007890	ENSMZEG00005007899 #25	cdk6 (ENSMZEG00005007908) #23	hepacam2 (ENSMZEG00005007924) #22	VPS50 (ENSMZEG00005007945) #21	CALCR (ENSMZEG00005008028) #20	tfpi2 (ENSMZEG00005008078) #19	gngt1 (ENSMZEG00005008086) #17	zgc:85777 (ENSMZEG00005008100)	bet1 (ENSMZEG00005008123)	col1a2 (ENSMZEG00005008145) #15	casd1 (ENSMZEG00005008249) #14	sgce (ENSMZEG00005008307) #13	PPP1R9A (ENSMZEG00005008423) #11	pdk4 (ENSMZEG00005008493)	asb4 (ENSMZEG00005008524) #7	DYNC1I1 (ENSMZEG00005008570)	SLC25A13 (ENSMZEG00005008730)	sem1 (ENSMZEG00005008764)
Eastern happy	MODERN SPECIES	13	ENSACLG00000022269	polr1f (ENSACLG00000022280)	FERD3L (ENSACLG00000022298)	ENSACLG00000022307	SNX13 (ENSACLG00000022373)	ENSACLG00000022593	btd (ENSACLG00000022600)	btd (ENSACLG00000022837)	ENSACLG00000022634	ENSACLG00000022864	ENSACLG00000022917	ENSACLG00000022947	ENSACLG00000022968	ENSACLG00000022977 #25	cdk6 (ENSACLG00000022998) #23	hepacam2 (ENSACLG00000023139) #22	VPS50 (ENSACLG00000023159) #21	ENSACLG00000023298	CALCR (ENSACLG00000023307) #20	tfpi2 (ENSACLG00000023375) #19	gngt1 (ENSACLG00000023512) #17	zgc:85777 (ENSACLG00000023519)	bet1 (ENSACLG00000023540)	col1a2 (ENSACLG00000023609) #15	casd1 (ENSACLG00000024244) #14	sgce (ENSACLG00000024270) #13	PPP1R9A (ENSACLG00000024305) #11	pdk4 (ENSACLG00000024317)	asb4 (ENSACLG00000024381) #7	DYNC1I1 (ENSACLG00000024415)	SLC25A13 (ENSACLG00000024494)
P. nyererei	MODERN SPECIES	325									ENSPNYG00000018967	ENSPNYG00000018977	ENSPNYG00000018999	ENSPNYG00000019015	ENSPNYG00000019030	ENSPNYG00000019039 #25	cdk6 (ENSPNYG00000019045) #23	hepacam2 (ENSPNYG00000019068) #22	VPS50 (ENSPNYG00000019148) #21	CALCR (ENSPNYG00000019250) #20	tfpi2 (ENSPNYG00000019401) #19	gngt1 (ENSPNYG00000019424) #17	zgc:85777 (ENSPNYG00000019454)	bet1 (ENSPNYG00000019472)	col1a2 (ENSPNYG00000019493) #15	casd1 (ENSPNYG00000019562) #14	sgce (ENSPNYG00000019608) #13	PPP1R9A (ENSPNYG00000019665) #11	asb4 (ENSPNYG00000019739) #7	pdk4 (ENSPNYG00000019764)	DYNC1I1 (ENSPNYG00000019803)	SLC25A13 (ENSPNYG00000019842)	sem1 (ENSPNYG00000019884)
Burton s mouthbrooder	MODERN SPECIES	367	polr1f (ENSHBUG00000020155)	FERD3L (ENSHBUG00000000605)	ENSHBUG00000020141	SNX13 (ENSHBUG00000020063)	ENSHBUG00000019929	btd (ENSHBUG00000019913)	btd (ENSHBUG00000019887)	ENSHBUG00000019850	ENSHBUG00000019682	ENSHBUG00000019636	ENSHBUG00000019629	ENSHBUG00000019625	ENSHBUG00000019607	ENSHBUG00000019592 #25	cdk6 (ENSHBUG00000019574) #23	hepacam2 (ENSHBUG00000019548) #22	VPS50 (ENSHBUG00000019524) #21	CALCR (ENSHBUG00000019323) #20	tfpi2 (ENSHBUG00000019217) #19	gngt1 (ENSHBUG00000019212) #17	zgc:85777 (ENSHBUG00000019198)	bet1 (ENSHBUG00000019157)	col1a2 (ENSHBUG00000019130) #15	casd1 (ENSHBUG00000019054) #14	sgce (ENSHBUG00000018971) #13	PPP1R9A (ENSHBUG00000000560) #11	asb4 (ENSHBUG00000018833) #7	pdk4 (ENSHBUG00000018817)	DYNC1I1 (ENSHBUG00000018787)	SLC25A13 (ENSHBUG00000018729)	sem1 (ENSHBUG00000018678)
Lyretail cichlid	MODERN SPECIES	302	ENSNBRG00000008580	SNX13 (ENSNBRG00000008502)	ENSNBRG00000008487	ENSNBRG00000008470	ENSNBRG00000008456	btd (ENSNBRG00000008433)	ENSNBRG00000008337	ENSNBRG00000008297	ENSNBRG00000008281	ENSNBRG00000008232	ENSNBRG00000008180	ENSNBRG00000008074	ENSNBRG00000008067	FAM133B (ENSNBRG00000008059) #25	cdk6 (ENSNBRG00000008020) #23	hepacam2 (ENSNBRG00000007958) #22	VPS50 (ENSNBRG00000007857) #21	CALCR (ENSNBRG00000007771) #20	tfpi2 (ENSNBRG00000007736) #19	gngt1 (ENSNBRG00000007723) #17	zgc:85777 (ENSNBRG00000007692)	bet1 (ENSNBRG00000007672)	col1a2 (ENSNBRG00000006663) #15	casd1 (ENSNBRG00000006482) #14	sgce (ENSNBRG00000006424) #13	PPP1R9A (ENSNBRG00000006373) #11	asb4 (ENSNBRG00000006357) #7	pdk4 (ENSNBRG00000006313)	DYNC1I1 (ENSNBRG00000006260)	SLC25A13 (ENSNBRG00000006201)	sem1 (ENSNBRG00000006187)
Nile tilapia	MODERN SPECIES	13	ITGB8 (ENSONIG00000010860)	ENSONIG00000010859	ENSONIG00000043203	ENSONIG00000037482	ENSONIG00000020502	SNX13 (ENSONIG00000010852)	ENSONIG00000031063	btd (ENSONIG00000010851)	ENSONIG00000010847	ENSONIG00000036488	granulin (ENSONIG00000010845)	ENSONIG00000033687	ENSONIG00000034756	ENSONIG00000029312 #25	cdk6 (ENSONIG00000038572) #23	hepacam2 (ENSONIG00000010833) #22	VPS50 (ENSONIG00000010824) #21	ENSONIG00000027698	CALCR (ENSONIG00000010814) #20	tfpi2 (ENSONIG00000037672) #19	gngt1 (ENSONIG00000010811) #17	zgc:85777 (ENSONIG00000010806)	bet1 (ENSONIG00000040156)	col1a2 (ENSONIG00000010792) #15	casd1 (ENSONIG00000010791) #14	sgce (ENSONIG00000010788) #13	PPP1R9A (ENSONIG00000010783) #11	asb4 (ENSONIG00000010780) #7	pdk4 (ENSONIG00000010773)	DYNC1I1 (ENSONIG00000010764)	SLC25A13 (ENSONIG00000010758)
Midas cichlid	MODERN SPECIES	563	ITGB8 (ENSACIG00000020344)	polr1f (ENSACIG00000020400)	ENSACIG00000020423	SNX13 (ENSACIG00000020453)	ENSACIG00000020475	btd (ENSACIG00000020483)	btd (ENSACIG00000020494)	btd (ENSACIG00000020507)	ENSACIG00000020524	ENSACIG00000020560	ENSACIG00000020564	ENSACIG00000020601	ENSACIG00000020623	ENSACIG00000020659 #25	cdk6 (ENSACIG00000020669) #23	hepacam2 (ENSACIG00000020688) #22	VPS50 (ENSACIG00000020723) #21	CALCR (ENSACIG00000000196) #20	tfpi2 (ENSACIG00000000272) #19	gngt1 (ENSACIG00000000345) #17	zgc:85777 (ENSACIG00000000376)	bet1 (ENSACIG00000000413)	col1a2 (ENSACIG00000000453) #15	casd1 (ENSACIG00000000834) #14	sgce (ENSACIG00000000891) #13	PPP1R9A (ENSACIG00000000918) #11	asb4 (ENSACIG00000000977) #7	pdk4 (ENSACIG00000001001)	DYNC1I1 (ENSACIG00000001041)	SLC25A13 (ENSACIG00000001085)	ENSACIG00000001146
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Carangaria	ANCESTRAL SPECIES	14	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Seriola	ANCESTRAL SPECIES	12	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Greater amberjack	MODERN SPECIES	48	ENSSDUG00000007136	ITGB8 (ENSSDUG00000007115)	ENSSDUG00000007104	fut9b.5 (ENSSDUG00000007064)	ENSSDUG00000007047	polr1f (ENSSDUG00000007038)	FERD3L (ENSSDUG00000007035)	ENSSDUG00000007028	SNX13 (ENSSDUG00000006938)	ENSSDUG00000006911	btd (ENSSDUG00000006882)	ENSSDUG00000006803	ENSSDUG00000006769	fam133b (ENSSDUG00000006753) #25	cdk6 (ENSSDUG00000006735) #23	hepacam2 (ENSSDUG00000006685) #22	VPS50 (ENSSDUG00000006570) #21	CALCR (ENSSDUG00000006509) #20	tfpi2 (ENSSDUG00000006475) #19	gngt1 (ENSSDUG00000006460) #17	zgc:85777 (ENSSDUG00000006406)	bet1 (ENSSDUG00000006388)	col1a2 (ENSSDUG00000006239) #15	casd1 (ENSSDUG00000006140) #14	sgce (ENSSDUG00000006087) #13	PPP1R9A (ENSSDUG00000006052) #11	asb4 (ENSSDUG00000006034) #7	ENSSDUG00000006026 #7	pdk4 (ENSSDUG00000005981)	DYNC1I1 (ENSSDUG00000005935)	SLC25A13 (ENSSDUG00000005870)
Yellowtail amberjack	MODERN SPECIES	2800		ENSSLDG00000013359	ENSSLDG00000013347	fut9b.2 (ENSSLDG00000013337)	ENSSLDG00000013326	ENSSLDG00000013316	ENSSLDG00000013303	ENSSLDG00000013293	SNX13 (ENSSLDG00000013259)	ENSSLDG00000013243	btd (ENSSLDG00000013222)	ENSSLDG00000013117	ENSSLDG00000013078	fam133b (ENSSLDG00000013059) #25	cdk6 (ENSSLDG00000013030) #23	hepacam2 (ENSSLDG00000012992) #22	VPS50 (ENSSLDG00000012930) #21	CALCR (ENSSLDG00000012800) #20	tfpi2 (ENSSLDG00000012768) #19	gngt1 (ENSSLDG00000012756) #17	zgc:85777 (ENSSLDG00000012725)	bet1 (ENSSLDG00000012707)	col1a2 (ENSSLDG00000012616) #15	casd1 (ENSSLDG00000012516) #14	sgce (ENSSLDG00000012439) #13	PPP1R9A (ENSSLDG00000012389) #11	asb4 (ENSSLDG00000012381) #7	pdk4 (ENSSLDG00000012350)	ENSSLDG00000012334	DYNC1I1 (ENSSLDG00000012298)
Barramundi perch	MODERN SPECIES	3	ITGB8 (ENSLCAG00010019908)	ENSLCAG00010019882	fut9b.2 (ENSLCAG00010019881)	ENSLCAG00010019880	ENSLCAG00010019870	ENSLCAG00010019865	ENSLCAG00010019863	SNX13 (ENSLCAG00010019840)	ENSLCAG00010019830	ENSLCAG00010019827	ENSLCAG00010019822	btd (ENSLCAG00010019803)	ENSLCAG00010019678	ENSLCAG00010019626	cdk6 (ENSLCAG00010019619) #23	hepacam2 (ENSLCAG00010019615) #22	VPS50 (ENSLCAG00010019407) #21	CALCR (ENSLCAG00010019141) #20	tfpi2 (ENSLCAG00010019046) #19	gngt1 (ENSLCAG00010019039) #17	zgc:85777 (ENSLCAG00010019027)	bet1 (ENSLCAG00010019016)	col1a2 (ENSLCAG00010018745) #15	casd1 (ENSLCAG00010018639) #14	sgce (ENSLCAG00010018580) #13	PPP1R9A (ENSLCAG00010018532) #11	asb4 (ENSLCAG00010018516) #7	pdk4 (ENSLCAG00010018420)	DYNC1I1 (ENSLCAG00010018381)	SLC25A13 (ENSLCAG00010018296)	sem1 (ENSLCAG00010018281)
Pleuronectoidei	ANCESTRAL SPECIES	15	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.A	ENSGT00940000164360.B	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a.p	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Turbot	MODERN SPECIES	14	ENSSMAG00000023368	ENSSMAG00000012707	ENSSMAG00000012764	ENSSMAG00000012770	ENSSMAG00000012774	POLR1F (ENSSMAG00000012792)	ENSSMAG00000012799	ENSSMAG00000012801	ENSSMAG00000012807	ENSSMAG00000012904	ENSSMAG00000012914	ENSSMAG00000012923	ENSSMAG00000013075	ENSSMAG00000013092 #25	cdk6 (ENSSMAG00000022076) #23	hepacam2 (ENSSMAG00000013127) #22	VPS50 (ENSSMAG00000013150) #21	CALCR (ENSSMAG00000013265) #20	tfpi2 (ENSSMAG00000013402) #19	gngt1 (ENSSMAG00000013446) #17	zgc:85777 (ENSSMAG00000013477)	bet1 (ENSSMAG00000013500)	col1a2 (ENSSMAG00000013511) #15	casd1 (ENSSMAG00000013550) #14	sgce (ENSSMAG00000013623) #13	PPP1R9A (ENSSMAG00000013688) #11	asb4 (ENSSMAG00000013749) #7	pdk4 (ENSSMAG00000013758)	DYNC1I1 (ENSSMAG00000013803)	SLC25A13 (ENSSMAG00000013855)	sem1 (ENSSMAG00000014052)
Tongue sole	MODERN SPECIES	9	ENSCSEG00000012240	ago2 (ENSCSEG00000012273)	dlx5a (ENSCSEG00000012302)	dlx6a (ENSCSEG00000012309)	ENSCSEG00000012316	DYNC1I1 (ENSCSEG00000012327)	pdk4 (ENSCSEG00000012385)	asb4 (ENSCSEG00000012399) #7	casd1 (ENSCSEG00000012412) #14	sgce (ENSCSEG00000012445) #13	PPP1R9A (ENSCSEG00000012487) #11	ENSCSEG00000012525	ENSCSEG00000012570	fam133b (ENSCSEG00000012571) #25	cdk6 (ENSCSEG00000012577) #23	hepacam2 (ENSCSEG00000012589) #22	VPS50 (ENSCSEG00000012607) #21	CALCR (ENSCSEG00000012673) #20	tfpi2 (ENSCSEG00000012705) #19	gngt1 (ENSCSEG00000012711) #17	zgc:85777 (ENSCSEG00000012715)	bet1 (ENSCSEG00000012731)	col1a2 (ENSCSEG00000012737) #15	ENSCSEG00000012762	ENSCSEG00000012778	ENSCSEG00000012783	ENSCSEG00000012791	ENSCSEG00000012798	ndufv1 (ENSCSEG00000012805)	PTK2 (ENSCSEG00000012851)	rplp1 (ENSCSEG00000012994)
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000168253	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000157683
Zig-zag eel	MODERN SPECIES	2	CDCA7L (ENSMAMG00000010174)	sp4 (ENSMAMG00000010162)	ENSMAMG00000026329	ITGB8 (ENSMAMG00000010121)	ENSMAMG00000010099	ENSMAMG00000010095	ENSMAMG00000028648	ENSMAMG00000009910	ENSMAMG00000009831	ENSMAMG00000026141	ENSMAMG00000009788	ENSMAMG00000009614	ENSMAMG00000027656	ENSMAMG00000009579 #25	CDK6 (ENSMAMG00000025835) #23	hepacam2 (ENSMAMG00000009531) #22	VPS50 (ENSMAMG00000009354) #21	CALCR (ENSMAMG00000009295) #20	tfpi2 (ENSMAMG00000009282) #19	gngt1 (ENSMAMG00000025870) #17	zgc:85777 (ENSMAMG00000009237)	bet1 (ENSMAMG00000009263)	col1a2 (ENSMAMG00000009132) #15	casd1 (ENSMAMG00000009075) #14	sgce (ENSMAMG00000009047) #13	PPP1R9A (ENSMAMG00000009004) #11	asb4 (ENSMAMG00000008961) #7	pdk4 (ENSMAMG00000008894)	DYNC1I1 (ENSMAMG00000008817)	ENSMAMG00000008797	ENSMAMG00000025565
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000159108	ENSGT00940000157827	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000162732	ENSGT00940000157683
Siamese fighting fish	MODERN SPECIES	2	sp4 (ENSBSLG00000013198)	ENSBSLG00000013158	ITGB8 (ENSBSLG00000013126)	ENSBSLG00000013085	polr1f (ENSBSLG00000013049)	FERD3L (ENSBSLG00000012501)	ENSBSLG00000012496	SNX13 (ENSBSLG00000011258)	ENSBSLG00000011222	btd (ENSBSLG00000011208)	ENSBSLG00000011198	ENSBSLG00000010763	ENSBSLG00000010275	ENSBSLG00000010272 #25	cdk6 (ENSBSLG00000010266) #23	hepacam2 (ENSBSLG00000010263) #22	VPS50 (ENSBSLG00000008430) #21	CALCR (ENSBSLG00000007989) #20	tfpi2 (ENSBSLG00000007958) #19	gngt1 (ENSBSLG00000007952) #17	zgc:85777 (ENSBSLG00000007815)	bet1 (ENSBSLG00000007713)	col1a2 (ENSBSLG00000005986) #15	casd1 (ENSBSLG00000005949) #14	sgce (ENSBSLG00000005066) #13	PPP1R9A (ENSBSLG00000004725) #11	asb4 (ENSBSLG00000004720) #7	pdk4 (ENSBSLG00000004706)	DYNC1I1 (ENSBSLG00000004114)	sem1 (ENSBSLG00000003587)	dlx6a (ENSBSLG00000003257)
Climbing perch	MODERN SPECIES	2	ENSATEG00000017939	ENSATEG00000027402	FERD3L (ENSATEG00000025236)	ENSATEG00000017981	ENSATEG00000017997	ENSATEG00000027472	ENSATEG00000025632	ENSATEG00000026657	ENSATEG00000026971	ENSATEG00000025329	ENSATEG00000018093	ENSATEG00000018134	ENSATEG00000018204	ENSATEG00000025670 #25	ENSATEG00000018232 #23	hepacam2 (ENSATEG00000018255) #22	VPS50 (ENSATEG00000018309) #21	CALCR (ENSATEG00000018440) #20	tfpi2 (ENSATEG00000018500) #19	gngt1 (ENSATEG00000018505) #17	zgc:85777 (ENSATEG00000018545)	bet1 (ENSATEG00000018582)	col1a2 (ENSATEG00000018607) #15	casd1 (ENSATEG00000018704) #14	sgce (ENSATEG00000018781) #13	PPP1R9A (ENSATEG00000018826) #11	asb4 (ENSATEG00000028921) #7	pdk4 (ENSATEG00000000070)	DYNC1I1 (ENSATEG00000000133)	ENSATEG00000000469	ENSATEG00000000483
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Tetraodontidae	ANCESTRAL SPECIES	56							ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380.sd #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b.d #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000163409	ENSGT00940000157683
Fugu	MODERN SPECIES	3	znf704 (ENSTRUG00000014603)	mrpl53 (ENSTRUG00000014652)	fabp4a (ENSTRUG00000014661)	ENSTRUG00000014693	ENSTRUG00000014705	polr1f (ENSTRUG00000019854)	ENSTRUG00000025781	ENSTRUG00000026755	SNX13 (ENSTRUG00000014752)	ENSTRUG00000020939	btd (ENSTRUG00000014869)	ENSTRUG00000014907	ENSTRUG00000015106	ENSTRUG00000015110 #25	cdk6 (ENSTRUG00000015133) #23	hepacam2 (ENSTRUG00000015175) #22	VPS50 (ENSTRUG00000015181) #21	CALCR (ENSTRUG00000015319) #20	tfpi2 (ENSTRUG00000015369) #19	gngt1 (ENSTRUG00000022037) #17	zgc:85777 (ENSTRUG00000015393)	bet1 (ENSTRUG00000015403)	col1a2 (ENSTRUG00000015407) #15	casd1 (ENSTRUG00000015861) #14	sgce (ENSTRUG00000015890) #13	PPP1R9A (ENSTRUG00000015914) #11	asb4 (ENSTRUG00000015951) #7	pdk4 (ENSTRUG00000015972)	DYNC1I1 (ENSTRUG00000020585)	ENSTRUG00000020257	dlx6a (ENSTRUG00000007566)
Tetraodon	MODERN SPECIES	16	tpd52 (ENSTNIG00000017783)	znf704 (ENSTNIG00000017782)	fabp4a (ENSTNIG00000017781)	ENSTNIG00000017780	ENSTNIG00000017779	polr1f (ENSTNIG00000017778)	FERD3L (ENSTNIG00000017777)	ENSTNIG00000001678	SNX13 (ENSTNIG00000017776)	btd (ENSTNIG00000017775)	ENSTNIG00000017774	ENSTNIG00000017773	ENSTNIG00000017772 #25	cdk6 (ENSTNIG00000017771) #23	ENSTNIG00000001616	hepacam2 (ENSTNIG00000017770) #22	VPS50 (ENSTNIG00000017769) #21	CALCR (ENSTNIG00000017768) #20	zgc:85777 (ENSTNIG00000017767)	bet1 (ENSTNIG00000017766)	col1a2 (ENSTNIG00000017765) #15	DYNC1I1 (ENSTNIG00000017764)	sem1 (ENSTNIG00000017763)	dlx6a (ENSTNIG00000017762)	dlx5a (ENSTNIG00000017761)	ago2 (ENSTNIG00000017760)	ENSTNIG00000017759	npy (ENSTNIG00000017758)	fam221a (ENSTNIG00000017757)	ccdc126 (ENSTNIG00000017756)	igf2bp3 (ENSTNIG00000017755)
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.a	ENSGT00390000013823.a.ab.b	ENSGT00390000013823.a.`b	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Ballan wrasse	MODERN SPECIES	42	sp4 (ENSLBEG00000024544)	ENSLBEG00000024532	ITGB8 (ENSLBEG00000024512)	ENSLBEG00000024319	ENSLBEG00000024240	POLR1F (ENSLBEG00000024225)	ENSLBEG00000024215	SNX13 (ENSLBEG00000024144)	ENSLBEG00000024090	ENSLBEG00000024081	btd (ENSLBEG00000024063)	ENSLBEG00000023981	ENSLBEG00000023909	ENSLBEG00000023871 #25	cdk6 (ENSLBEG00000023839) #23	hepacam2 (ENSLBEG00000023787) #22	VPS50 (ENSLBEG00000023655) #21	CALCR (ENSLBEG00000023537) #20	tfpi2 (ENSLBEG00000023496) #19	gngt1 (ENSLBEG00000023483) #17	zgc:85777 (ENSLBEG00000023468)	bet1 (ENSLBEG00000023445)	ENSLBEG00000023428	col1a2 (ENSLBEG00000023364) #15	casd1 (ENSLBEG00000023286) #14	sgce (ENSLBEG00000023250) #13	PPP1R9A (ENSLBEG00000023211) #11	asb4 (ENSLBEG00000023173) #7
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.b	ENSGT00390000013823.a.ab.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.b	ENSGT00390000013823.a.ab.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.a	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT01100000263525.b.b #17	ENSGT00940000159917 #19	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000163409
European seabass	MODERN SPECIES	22	ENSDLAG00005034261	ITGB8 (ENSDLAG00005019323)	ENSDLAG00005003402 ##12	ENSDLAG00005019286	ENSDLAG00005034882	ENSDLAG00005019271	ENSDLAG00005027728	ENSDLAG00005019261	ENSDLAG00005019021	ENSDLAG00005029430	ENSDLAG00005018988	ENSDLAG00005018515	ENSDLAG00005018481	ENSDLAG00005027749 #25	CDK6 (ENSDLAG00005018467) #23	hepacam2 (ENSDLAG00005018462) #22	VPS50 (ENSDLAG00005017767) #21	CALCR (ENSDLAG00005016993) #20	gngt1 (ENSDLAG00005031025) #17	tfpi2 (ENSDLAG00005016947) #19	zgc:85777 (ENSDLAG00005016872)	bet1 (ENSDLAG00005016856)	col1a2 (ENSDLAG00005015255) #15	casd1 (ENSDLAG00005015184) #14	sgce (ENSDLAG00005014947) #13	PPP1R9A (ENSDLAG00005014873) #11	asb4 (ENSDLAG00005014867) #7	pdk4 (ENSDLAG00005013551)	DYNC1I1 (ENSDLAG00005011445)	SLC25A13 (ENSDLAG00005010129)	ENSDLAG00005010087
Large yellow croaker	MODERN SPECIES	484	ENSLCRG00005022204	fut9b.5 (ENSLCRG00005022202)	ENSLCRG00005022200	polr1f (ENSLCRG00005022198)	ENSLCRG00005022197	ENSLCRG00005022196	ENSLCRG00005022195	SNX13 (ENSLCRG00005022166)	ENSLCRG00005022162	ENSLCRG00005022160	btd (ENSLCRG00005022157)	ENSLCRG00005022140	ENSLCRG00005022128	fam133b (ENSLCRG00005022126) #25	cdk6 (ENSLCRG00005022121) #23	hepacam2 (ENSLCRG00005022118) #22	VPS50 (ENSLCRG00005022074) #21	CALCR (ENSLCRG00005021352) #20	tfpi2 (ENSLCRG00005021342) #19	gngt1 (ENSLCRG00005021340) #17	zgc:85777 (ENSLCRG00005021338)	bet1 (ENSLCRG00005021336)	col1a2 (ENSLCRG00005021256) #15	casd1 (ENSLCRG00005021241) #14	sgce (ENSLCRG00005020859) #13	PPP1R9A (ENSLCRG00005020668) #11	asb4 (ENSLCRG00005020658) #7	pdk4 (ENSLCRG00005020566)	DYNC1I1 (ENSLCRG00005020182)	SLC25A13 (ENSLCRG00005020163)	ENSLCRG00005020156
Perciformes	ANCESTRAL SPECIES	11	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.a	ENSGT00390000013823.a.ab.b	ENSGT00390000013823.a.`b	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00940000162033.a.b	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.`b	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000159917 #19	ENSGT01100000263525.b.b #17	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344	ENSGT00940000162732
Stickleback	MODERN SPECIES	9	ITGB8 (ENSGACG00000006439)	ENSGACG00000006436	ENSGACG00000006432	ENSGACG00000006431	fut9b.1 (ENSGACG00000006430)	ENSGACG00000006429	polr1f (ENSGACG00000006425)	ENSGACG00000006421	ENSGACG00000006420	SNX13 (ENSGACG00000006404)	btd (ENSGACG00000006390)	ENSGACG00000006364	ENSGACG00000006358	ENSGACG00000006347 #25	cdk6 (ENSGACG00000006323) #23	hepacam2 (ENSGACG00000006322) #22	VPS50 (ENSGACG00000006302) #21	CALCR (ENSGACG00000006273) #20	tfpi2 (ENSGACG00000006264) #19	gngt1 (ENSGACG00000006256) #17	bet1 (ENSGACG00000006253)	zgc:85777 (ENSGACG00000006126)	ENSGACG00000006123	RAPGEF5 (ENSGACG00000006108)	ENSGACG00000006102	hycc1 (ENSGACG00000006077)	klhl7 (ENSGACG00000006062)	ENSGACG00000006054	ENSGACG00000006036	cspg5b (ENSGACG00000006031)	ENSGACG00000006027
Lumpfish	MODERN SPECIES	2	ENSCLMG00005004541	ENSCLMG00005004562	ENSCLMG00005004577	ENSCLMG00005004597	polr1f (ENSCLMG00005004608)	ENSCLMG00005004625	ENSCLMG00005004639	SNX13 (ENSCLMG00005004809)	ENSCLMG00005007752	ENSCLMG00005007753	btd (ENSCLMG00005007755)	ENSCLMG00005007788	ENSCLMG00005012093	ENSCLMG00005012094 #25	cdk6 (ENSCLMG00005012095) #23	hepacam2 (ENSCLMG00005012097) #22	VPS50 (ENSCLMG00005012106) #21	CALCR (ENSCLMG00005013957) #20	ENSCLMG00005013958	ENSCLMG00005013959 #20	ENSCLMG00005013960 #20	tfpi2 (ENSCLMG00005013962) #19	ENSCLMG00005013963	zgc:85777 (ENSCLMG00005013965)	bet1 (ENSCLMG00005014041)	col1a2 (ENSCLMG00005014056) #15	casd1 (ENSCLMG00005014589) #14	sgce (ENSCLMG00005014591) #13	PPP1R9A (ENSCLMG00005014592) #11	asb4 (ENSCLMG00005014594) #7	pdk4 (ENSCLMG00005014596)
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT01090000259987.b.a	ENSGT00940000164360.B	ENSGT00940000164360.A	ENSGT00940000163281.b	ENSGT00390000005553	ENSGT00940000161409	ENSGT00940000163428.b.b	ENSGT00950000182856.a.a.a	ENSGT00940000174023	ENSGT00390000013823.a.ab.a	ENSGT00390000013823.a.ab.b	ENSGT00950000182908.C.a	ENSGT00470000042293.a.a	ENSGT00730000111097 #25	ENSGT00940000157957 #23	ENSGT01100000263551.b.b.b #22	ENSGT00390000003442 #21	ENSGT00940000155380 #20	ENSGT00940000177895	ENSGT00940000159917 #19	ENSGT00990000204445.a	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000155639 #15	ENSGT00390000004037 #14	ENSGT00390000005672.a.b #13	ENSGT00940000155538 #11	ENSGT00940000158874 #7	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000156032.`b.b.b	ENSGT00940000159344
Pike perch	MODERN SPECIES	41	ENSSLUG00000019524	fut9b.5 (ENSSLUG00000019520)	ENSSLUG00000019515	polr1f (ENSSLUG00000019513)	ENSSLUG00000019511	ENSSLUG00000019509	SNX13 (ENSSLUG00000019350)	ENSSLUG00000019328	ENSSLUG00000019326	btd (ENSSLUG00000019317)	ENSSLUG00000019325	ENSSLUG00000019297	ENSSLUG00000019280	fam133b (ENSSLUG00000019276) #25	cdk6 (ENSSLUG00000019273) #23	hepacam2 (ENSSLUG00000019272) #22	VPS50 (ENSSLUG00000017082) #21	CALCR (ENSSLUG00000016940) #20	ENSSLUG00000016933 #20	ENSSLUG00000016928	ENSSLUG00000016926	ENSSLUG00000016919	tfpi2 (ENSSLUG00000016912) #19	zgc:85777 (ENSSLUG00000016870)	bet1 (ENSSLUG00000016859)	col1a2 (ENSSLUG00000014735) #15	casd1 (ENSSLUG00000014624) #14	sgce (ENSSLUG00000013563) #13	PPP1R9A (ENSSLUG00000013530) #11	asb4 (ENSSLUG00000013528) #7	pdk4 (ENSSLUG00000013373)
Channel bull blenny	MODERN SPECIES	2	ITGB8 (ENSCGOG00000018804)	ENSCGOG00000018800	fut9b.2 (ENSCGOG00000018798)	ENSCGOG00000018797	polr1f (ENSCGOG00000018796)	ENSCGOG00000018795	ENSCGOG00000018794	SNX13 (ENSCGOG00000018690)	ENSCGOG00000018677	ENSCGOG00000018675	btd (ENSCGOG00000018674)	ENSCGOG00000015757	ENSCGOG00000015639	fam133b (ENSCGOG00000015634) #25	cdk6 (ENSCGOG00000015501) #23	hepacam2 (ENSCGOG00000015498) #22	VPS50 (ENSCGOG00000015375) #21	CALCR (ENSCGOG00000015345) #20	tfpi2 (ENSCGOG00000015337) #19	ENSCGOG00000015334	bet1 (ENSCGOG00000015319)	zgc:85777 (ENSCGOG00000015297)	col1a2 (ENSCGOG00000014901) #15	casd1 (ENSCGOG00000014817) #14	sgce (ENSCGOG00000014807) #13	PPP1R9A (ENSCGOG00000014658) #11	asb4 (ENSCGOG00000014646) #7	pdk4 (ENSCGOG00000013988)	DYNC1I1 (ENSCGOG00000012026)	SLC25A13 (ENSCGOG00000011972)	sem1 (ENSCGOG00000011968)
Pinecone sodierfish	MODERN SPECIES	2	ITGB8 (ENSMMDG00005010894)	ENSMMDG00005010897	fut9b.1 (ENSMMDG00005010898)	ENSMMDG00005010900	polr1f (ENSMMDG00005010902)	ENSMMDG00005010903	ENSMMDG00005010904	SNX13 (ENSMMDG00005010915)	ENSMMDG00005011918	btd (ENSMMDG00005011919)	ENSMMDG00005011935	ENSMMDG00005012137	ENSMMDG00005012146	fam133b (ENSMMDG00005012150) #25	cdk6 (ENSMMDG00005012151) #23	hepacam2 (ENSMMDG00005012156) #22	VPS50 (ENSMMDG00005012204) #21	CALCR (ENSMMDG00005013532) #20	ENSMMDG00005013534	tfpi2 (ENSMMDG00005013536) #19	gngt1 (ENSMMDG00005013537) #17	zgc:85777 (ENSMMDG00005013540)	bet1 (ENSMMDG00005013556)	col1a2 (ENSMMDG00005013559) #15	casd1 (ENSMMDG00005013566) #14	sgce (ENSMMDG00005013596) #13	PPP1R9A (ENSMMDG00005015321) #11	asb4 (ENSMMDG00005015480) #7	pdk4 (ENSMMDG00005015486)	DYNC1I1 (ENSMMDG00005015491)	SLC25A13 (ENSMMDG00005015575)
Cod	MODERN SPECIES	14	uqcrb (ENSGMOG00000010509)	mterf3 (ENSGMOG00000010492)	PTDSS1 (ENSGMOG00000010473)	ENSGMOG00000010422	rbm24a (ENSGMOG00000028066)	cap2 (ENSGMOG00000010398)	ENSGMOG00000028269	vps28 (ENSGMOG00000010385)	mapk15 (ENSGMOG00000010365)	grinaa (ENSGMOG00000029154) ##30	ENSGMOG00000022827	ENSGMOG00000027363	ENSGMOG00000028024 #25	ENSGMOG00000026596	CDK6 (ENSGMOG00000015380) #23	hepacam2 (ENSGMOG00000013880) #22	VPS50 (ENSGMOG00000008792) #21	CALCR (ENSGMOG00000002241) #20	ENSGMOG00000028572	tfpi2 (ENSGMOG00000010149) #19	ENSGMOG00000032903	zgc:85777 (ENSGMOG00000010136)	bet1 (ENSGMOG00000034885)	ENSGMOG00000025615	col1a2 (ENSGMOG00000013455) #15	casd1 (ENSGMOG00000013501) #14	sgce (ENSGMOG00000013519) #13	ENSGMOG00000035801 #11	ENSGMOG00000025406 #11	asb4 (ENSGMOG00000013559) #7	pdk4 (ENSGMOG00000013570)
Spotted gar	MODERN SPECIES	649	fzd1 (ENSLOCG00000010570)	MTERF1 (ENSLOCG00000018348) #36	ENSLOCG00000010582 ##35	cyp51 (ENSLOCG00000010601) #34	LRRD1 (ENSLOCG00000010613) #33	krit1 (ENSLOCG00000010622) #32	ANKIB1 (ENSLOCG00000010636) #31	gatad1 (ENSLOCG00000010654) #29	ENSLOCG00000010663	pex1 (ENSLOCG00000010675) #28	rbm48 (ENSLOCG00000010688) #27	efcab1 (ENSLOCG00000010700)	ENSLOCG00000010709	FAM133B (ENSLOCG00000010716) #25	cdk6 (ENSLOCG00000010732) #23	hepacam2 (ENSLOCG00000010740) #22	VPS50 (ENSLOCG00000010759) #21	CALCR (ENSLOCG00000010787) #20	tfpi2 (ENSLOCG00000010795) #19	gngt1 (ENSLOCG00000010805) #17	zgc:85777 (ENSLOCG00000010811)	bet1 (ENSLOCG00000010821)	col1a2 (ENSLOCG00000010835) #15	casd1 (ENSLOCG00000010891) #14	sgce (ENSLOCG00000010901) #13	PPP1R9A (ENSLOCG00000010917) #11	pon1 (ENSLOCG00000010932) #8	asb4 (ENSLOCG00000010959) #7	pdk4 (ENSLOCG00000010966)	dync1i1 (ENSLOCG00000010982)	SLC25A13 (ENSLOCG00000010992)
Elephant shark	MODERN SPECIES	1624	cct5 (ENSCMIG00000017477)	atpsckmt (ENSCMIG00000017480)	ENSCMIG00000017482	sema5a (ENSCMIG00000017539)	MTRR (ENSCMIG00000017669)	FASTKD3 (ENSCMIG00000017673)	bag1 (ENSCMIG00000017675)	chmp5b (ENSCMIG00000017682)	ENSCMIG00000017706	NFX1 (ENSCMIG00000017740)	poc1bl (ENSCMIG00000017813)	GALNT12 (ENSCMIG00000017821)	gabbr2 (ENSCMIG00000017843)	ENSCMIG00000017850	elp2 (ENSCMIG00000017853)	ENSCMIG00000017855 #22	VPS50 (ENSCMIG00000017873) #21	ENSCMIG00000017890 #20	ENSCMIG00000017893 #20	ENSCMIG00000017897 #19	GNGT1 (ENSCMIG00000017900) #17