Murinae	ANCESTRAL SPECIES	8	ENSGT00390000005553 #7	ENSGT00940000154487.B #8	ENSGT00940000158612 #9	ENSGT00940000161245 #10	ENSGT01030000234637.a.b.b #11	ENSGT00940000153456.b.a #12	ENSGT00960000192558	ENSGT00940000155306.b #13	ENSGT00940000156858 #14	ENSGT00940000158160 #15	ENSGT00390000011239 #17	ENSGT01050000244841.A.b.b.a #18	ENSGT00390000004586 #19	ENSGT00550000074907 #20	ENSGT00390000011863.d #21	ENSGT01070000253775.a.d.a.a.a.a #22	ENSGT00950000186265	ENSGT00510000047522 #23	ENSGT01070000253775.a.d.a.a.a.b #24	ENSGT00550000074844 #25	ENSGT00940000156003 #26	ENSGT00950000183056.A.b #27	ENSGT00510000048137 #28	ENSGT00940000158351.u	ENSGT00940000162505 #30	ENSGT00390000015191 #31	ENSGT00950000182863.B.b #32	ENSGT00940000158104 #33	ENSGT00940000157666 #34	ENSGT00940000155671 #35	ENSGT00730000111137 #37
Rat	MODERN SPECIES	16	Polr1f (ENSRNOG00000010750) #7	Efcab10 (ENSRNOG00000010730) #8	Atxn7l1 (ENSRNOG00000010415) #9	Cdhr3 (ENSRNOG00000047455) #10	Sypl1 (ENSRNOG00000009856) #11	Nampt (ENSRNOG00000009754) #12	Ccdc71l (ENSRNOG00000039207) #13	Pik3cg (ENSRNOG00000009385) #14	Prkar2b (ENSRNOG00000009079) #15	ENSRNOG00000063368 #16	Hbp1 (ENSRNOG00000008927) #17	Gpr22 (ENSRNOG00000008423) #18	Cog5 (ENSRNOG00000056610) #19	Dus4l (ENSRNOG00000008155) #20	Bcap29 (ENSRNOG00000007884) #21	Slc26a4 (ENSRNOG00000058692) #22	Cbll1 (ENSRNOG00000007253) #23	Slc26a3 (ENSRNOG00000006878) #24	Dld (ENSRNOG00000006364) #25	Lamb1 (ENSRNOG00000005678) #26	Fam110c (ENSRNOG00000005660) #27	Sh3yl1 (ENSRNOG00000005522) #28	Acp1 (ENSRNOG00000005260) #29	Alkal2 (ENSRNOG00000005154) #30	Tmem18 (ENSRNOG00000005144) #31	Sntg2 (ENSRNOG00000004928) #32	Tpo (ENSRNOG00000004646) #33	Pxdn (ENSRNOG00000060614) #34	Myt1l (ENSRNOG00000004269) #35	AABR07064622.1 (ENSRNOG00000047877) #36	Eipr1 (ENSRNOG00000009285) #37
Mus	ANCESTRAL SPECIES	10	ENSGT00390000005553 #7	ENSGT00940000154487.B #8	ENSGT00940000158612 #9	ENSGT00940000161245 #10	ENSGT01030000234637.a.b.b #11	ENSGT00940000153456.b.a #12	ENSGT00960000192558	ENSGT00940000155306.b #13	ENSGT00940000156858 #14	ENSGT00940000158160 #15	ENSGT00390000011239 #17	ENSGT01050000244841.A.b.b.a #18	ENSGT00390000004586 #19	ENSGT00550000074907 #20	ENSGT00390000011863.d #21	ENSGT01070000253775.a.d.a.a.a.a #22	ENSGT00950000186265	ENSGT00510000047522 #23	ENSGT01070000253775.a.d.a.a.a.b #24	ENSGT00550000074844 #25	ENSGT00940000156003 #26	ENSGT00950000183056.A.b #27	ENSGT00510000048137 #28	ENSGT00940000158351.u	ENSGT00940000162505 #30	ENSGT00390000015191 #31	ENSGT00950000182863.B.b #32	ENSGT00940000158104 #33	ENSGT00940000157666 #34	ENSGT00940000155671 #35	ENSGT00730000111137 #37
Mus_A	ANCESTRAL SPECIES	17	ENSGT00390000005553 #7	ENSGT00940000154487.B #8	ENSGT00940000158612 #9	ENSGT00940000161245 #10	ENSGT01030000234637.a.b.b #11	ENSGT00940000153456.b.a #12	ENSGT00960000192558	ENSGT00940000155306.b #13	ENSGT00940000156858 #14	ENSGT00940000158160 #15	ENSGT00390000011239 #17	ENSGT01050000244841.A.b.b.a #18	ENSGT00390000004586 #19	ENSGT00550000074907 #20	ENSGT00390000011863.d #21	ENSGT01070000253775.a.d.a.a.a.a #22	ENSGT00950000186265	ENSGT00510000047522 #23	ENSGT01070000253775.a.d.a.a.a.b #24	ENSGT00550000074844 #25	ENSGT00940000156003 #26	ENSGT00950000183056.A.b #27	ENSGT00510000048137 #28	ENSGT00940000158351.u	ENSGT00940000162505 #30	ENSGT00390000015191 #31	ENSGT00950000182863.B.b #32	ENSGT00940000158104 #33	ENSGT00940000157666 #34	ENSGT00940000155671 #35	ENSGT00730000111137 #37
Mus_B	ANCESTRAL SPECIES	17	ENSGT00390000005553 #7	ENSGT00940000154487.B #8	ENSGT00940000158612 #9	ENSGT00940000161245 #10	ENSGT01030000234637.a.b.b #11	ENSGT00940000153456.b.a #12	ENSGT00960000192558	ENSGT00940000155306.b #13	ENSGT00940000156858 #14	ENSGT00940000158160 #15	ENSGT00390000011239 #17	ENSGT01050000244841.A.b.b.a #18	ENSGT00390000004586 #19	ENSGT00550000074907 #20	ENSGT00390000011863.d #21	ENSGT01070000253775.a.d.a.a.a.a #22	ENSGT00950000186265	ENSGT00510000047522 #23	ENSGT01070000253775.a.d.a.a.a.b #24	ENSGT00550000074844 #25	ENSGT00940000156003 #26	ENSGT00950000183056.A.b #27	ENSGT00510000048137 #28	ENSGT00940000158351.u	ENSGT00940000162505 #30	ENSGT00390000015191 #31	ENSGT00950000182863.B.b #32	ENSGT00940000158104 #33	ENSGT00940000157666 #34	ENSGT00940000155671 #35	ENSGT00730000111137 #37
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000005553 #7	ENSGT00940000154487.B #8	ENSGT00940000158612 #9	ENSGT00940000161245 #10	ENSGT01030000234637.a.b.b #11	ENSGT00940000153456.b.a #12	ENSGT00960000192558	ENSGT00940000155306.b #13	ENSGT00940000156858 #14	ENSGT00940000158160 #15	ENSGT00390000011239 #17	ENSGT01050000244841.A.b.b.a #18	ENSGT00390000004586 #19	ENSGT00550000074907 #20	ENSGT00390000011863.d #21	ENSGT01070000253775.a.d.a.a.a.a #22	ENSGT00950000186265	ENSGT00510000047522 #23	ENSGT01070000253775.a.d.a.a.a.b #24	ENSGT00550000074844 #25	ENSGT00940000156003 #26	ENSGT00950000183056.A.b #27	ENSGT00510000048137 #28	ENSGT00940000158351.u	ENSGT00940000162505 #30	ENSGT00390000015191 #31	ENSGT00950000182863.B.b #32	ENSGT00940000158104 #33	ENSGT00940000157666 #34	ENSGT00940000155671 #35	ENSGT00730000111137 #37
Steppe mouse	MODERN SPECIES	11	ENSMSIG00000004795	ENSMSIG00000004759	Cdhr3 (ENSMSIG00000004694) #10	Sypl (ENSMSIG00000004663) #11	ENSMSIG00000004629 #12	ENSMSIG00000004613	Ccdc71l (ENSMSIG00000004605) #13	Pik3cg (ENSMSIG00000004551) #14	Prkar2b (ENSMSIG00000004509) #15	Hbp1 (ENSMSIG00000004431) #17	ENSMSIG00000004393	Gpr22 (ENSMSIG00000004368) #18	Cog5 (ENSMSIG00000004192) #19	Dus4l (ENSMSIG00000004163) #20	Bcap29 (ENSMSIG00000004115) #21	Slc26a4 (ENSMSIG00000004010) #22	ENSMSIG00000003995	Cbll1 (ENSMSIG00000003858) #23	Slc26a3 (ENSMSIG00000003716) #24	ENSMSIG00000003685 #25	Lamb1 (ENSMSIG00000003623) #26	ENSMSIG00000003583 #27	ENSMSIG00000003548	ENSMSIG00000003520	Sh3yl1 (ENSMSIG00000003387) #28	ENSMSIG00000003318	Alkal2 (ENSMSIG00000003291) #30	Tmem18 (ENSMSIG00000003259) #31	Sntg2 (ENSMSIG00000003075) #32	Tpo (ENSMSIG00000002878) #33	Pxdn (ENSMSIG00000002640) #34
spretus	MODERN SPECIES	3	Ferd3l (MGP_SPRETEiJ_G0018535)	Polr1f (MGP_SPRETEiJ_G0018534) #7	Efcab10 (MGP_SPRETEiJ_G0018533) #8	Atxn7l1 (MGP_SPRETEiJ_G0018532) #9	Cdhr3 (MGP_SPRETEiJ_G0018531) #10	Sypl (MGP_SPRETEiJ_G0018530) #11	Nampt (MGP_SPRETEiJ_G0018529) #12	Ccdc71l (MGP_SPRETEiJ_G0018528) #13	Pik3cg (MGP_SPRETEiJ_G0018527) #14	Prkar2b (MGP_SPRETEiJ_G0018526) #15	Hbp1 (MGP_SPRETEiJ_G0018525) #17	Gpr22 (MGP_SPRETEiJ_G0018524) #18	Cog5 (MGP_SPRETEiJ_G0018523) #19	Dus4l (MGP_SPRETEiJ_G0018522) #20	Bcap29 (MGP_SPRETEiJ_G0018521) #21	Slc26a4 (MGP_SPRETEiJ_G0018520) #22	Cbll1 (MGP_SPRETEiJ_G0018519) #23	Slc26a3 (MGP_SPRETEiJ_G0018518) #24	Dld (MGP_SPRETEiJ_G0018517) #25	Lamb1 (MGP_SPRETEiJ_G0018516) #26	MGP_SPRETEiJ_G0018515	Fam110c (MGP_SPRETEiJ_G0018514) #27	Sh3yl1 (MGP_SPRETEiJ_G0018513) #28	MGP_SPRETEiJ_G0018512	Alkal2 (MGP_SPRETEiJ_G0018511) #30	Tmem18 (MGP_SPRETEiJ_G0018510) #31	Sntg2 (MGP_SPRETEiJ_G0018509) #32	Tpo (MGP_SPRETEiJ_G0018508) #33	Pxdn (MGP_SPRETEiJ_G0018507) #34	Myt1l (MGP_SPRETEiJ_G0018506) #35	Eipr1 (MGP_SPRETEiJ_G0018505) #37
Mouse	MODERN SPECIES	3	Ferd3l (ENSMUSG00000046518)	Polr1f (ENSMUSG00000020561) #7	Efcab10 (ENSMUSG00000020562) #8	Atxn7l1 (ENSMUSG00000020564) #9	Cdhr3 (ENSMUSG00000035860) #10	Sypl (ENSMUSG00000020570) #11	Nampt (ENSMUSG00000020572) #12	Ccdc71l (ENSMUSG00000090946) #13	Pik3cg (ENSMUSG00000020573) #14	Prkar2b (ENSMUSG00000002997) #15	Hbp1 (ENSMUSG00000002996) #17	Gpr22 (ENSMUSG00000044067) #18	Cog5 (ENSMUSG00000035933) #19	Dus4l (ENSMUSG00000020648) #20	Bcap29 (ENSMUSG00000020650) #21	Slc26a4 (ENSMUSG00000020651) #22	Cbll1 (ENSMUSG00000020659) #23	Slc26a3 (ENSMUSG00000001225) #24	Dld (ENSMUSG00000020664) #25	Lamb1 (ENSMUSG00000002900) #26	Gm6993 (ENSMUSG00000112187)	Fam110c (ENSMUSG00000036136) #27	Sh3yl1 (ENSMUSG00000020669) #28	Acp1 (ENSMUSG00000044573)	Alkal2 (ENSMUSG00000054204) #30	Tmem18 (ENSMUSG00000043061) #31	Sntg2 (ENSMUSG00000020672) #32	Tpo (ENSMUSG00000020673) #33	Pxdn (ENSMUSG00000020674) #34	Myt1l (ENSMUSG00000061911) #35	Eipr1 (ENSMUSG00000036613) #37
Ryukyu mouse	MODERN SPECIES	3	Ferd3l (MGP_CAROLIEiJ_G0017693)	Polr1f (MGP_CAROLIEiJ_G0017692) #7	Efcab10 (MGP_CAROLIEiJ_G0017691) #8	Atxn7l1 (MGP_CAROLIEiJ_G0017690) #9	Cdhr3 (MGP_CAROLIEiJ_G0017689) #10	MGP_CAROLIEiJ_G0017688 #11	Nampt (MGP_CAROLIEiJ_G0017687) #12	Ccdc71l (MGP_CAROLIEiJ_G0017686) #13	Pik3cg (MGP_CAROLIEiJ_G0017685) #14	Prkar2b (MGP_CAROLIEiJ_G0017684) #15	Hbp1 (MGP_CAROLIEiJ_G0017683) #17	Gpr22 (MGP_CAROLIEiJ_G0017682) #18	Cog5 (MGP_CAROLIEiJ_G0017681) #19	Dus4l (MGP_CAROLIEiJ_G0017680) #20	Bcap29 (MGP_CAROLIEiJ_G0017679) #21	Slc26a4 (MGP_CAROLIEiJ_G0017678) #22	Cbll1 (MGP_CAROLIEiJ_G0017677) #23	Slc26a3 (MGP_CAROLIEiJ_G0017676) #24	Dld (MGP_CAROLIEiJ_G0017675) #25	Lamb1 (MGP_CAROLIEiJ_G0017674) #26	MGP_CAROLIEiJ_G0017673	Fam110c (MGP_CAROLIEiJ_G0017672) #27	Sh3yl1 (MGP_CAROLIEiJ_G0017671) #28	Acp1 (MGP_CAROLIEiJ_G0017670)	Alkal2 (MGP_CAROLIEiJ_G0017669) #30	Tmem18 (MGP_CAROLIEiJ_G0017668) #31	Sntg2 (MGP_CAROLIEiJ_G0017667) #32	Tpo (MGP_CAROLIEiJ_G0017666) #33	Pxdn (MGP_CAROLIEiJ_G0017665) #34	Myt1l (MGP_CAROLIEiJ_G0017664) #35	Eipr1 (MGP_CAROLIEiJ_G0017663) #37
Shrew mouse	MODERN SPECIES	20	Ferd3l (MGP_PahariEiJ_G0029451)	Polr1f (MGP_PahariEiJ_G0029450) #7	Efcab10 (MGP_PahariEiJ_G0029449) #8	Atxn7l1 (MGP_PahariEiJ_G0029448) #9	Cdhr3 (MGP_PahariEiJ_G0029447) #10	Sypl (MGP_PahariEiJ_G0029446) #11	Nampt (MGP_PahariEiJ_G0029445) #12	Ccdc71l (MGP_PahariEiJ_G0029444) #13	Pik3cg (MGP_PahariEiJ_G0029443) #14	Prkar2b (MGP_PahariEiJ_G0029442) #15	Hbp1 (MGP_PahariEiJ_G0029441) #17	Gpr22 (MGP_PahariEiJ_G0029440) #18	Cog5 (MGP_PahariEiJ_G0029439) #19	Dus4l (MGP_PahariEiJ_G0029438) #20	Bcap29 (MGP_PahariEiJ_G0029437) #21	Slc26a4 (MGP_PahariEiJ_G0029436) #22	Cbll1 (MGP_PahariEiJ_G0029435) #23	Slc26a3 (MGP_PahariEiJ_G0029434) #24	Dld (MGP_PahariEiJ_G0029433) #25	Lamb1 (MGP_PahariEiJ_G0029432) #26	MGP_PahariEiJ_G0029431	MGP_PahariEiJ_G0029430 #27	Sh3yl1 (MGP_PahariEiJ_G0029429) #28	Acp1 (MGP_PahariEiJ_G0029428)	Alkal2 (MGP_PahariEiJ_G0029427) #30	Tmem18 (MGP_PahariEiJ_G0029426) #31	Sntg2 (MGP_PahariEiJ_G0029425) #32	Tpo (MGP_PahariEiJ_G0029424) #33	Pxdn (MGP_PahariEiJ_G0029423) #34	Myt1l (MGP_PahariEiJ_G0029422) #35	Eipr1 (MGP_PahariEiJ_G0029421) #37