Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b #22 Gnathostomata ANCESTRAL SPECIES 810 ENSGT00940000154487.B ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 Euteleostomi ANCESTRAL SPECIES 202 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Sarcopterygii ANCESTRAL SPECIES 31 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 Tetrapoda ANCESTRAL SPECIES 5 ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 Amniota ANCESTRAL SPECIES 5 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 Mammalia ANCESTRAL SPECIES 36 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 Theria ANCESTRAL SPECIES ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000169914 ENSGT00950000185983 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Primates ANCESTRAL SPECIES 12 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 ENSGT00590000083094.a.b #36 Haplorrhini ANCESTRAL SPECIES 8 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Platyrrhini ANCESTRAL SPECIES 10 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.m #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.a.a #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 Cebidae ANCESTRAL SPECIES 9 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.m #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.a.a.b.b ##32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d.m #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.a.a.a ##32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 ENSGT00940000159477 Bolivian squirrel monkey MODERN SPECIES 44 GARIN1B (ENSSBOG00000031604) #7 ENSSBOG00000022858 #8 ENSSBOG00000002650 #9 PRRT4 (ENSSBOG00000025268) #10 RBM28 (ENSSBOG00000012308) #11 ENSSBOG00000035277 #12 LEP (ENSSBOG00000014945) #13 SND1 (ENSSBOG00000032461) #14 LRRC4 (ENSSBOG00000022816) #15 PAX4 (ENSSBOG00000023750) #16 FSCN3 (ENSSBOG00000035306) #17 ARF5 (ENSSBOG00000021669) #18 GCC1 (ENSSBOG00000021698) #19 ZNF800 (ENSSBOG00000028846) #20 ENSSBOG00000033175 #21 GRM8 (ENSSBOG00000032038) #22 ENSSBOG00000014318 #23 POT1 (ENSSBOG00000035761) #24 ENSSBOG00000026532 #25 GPR37 (ENSSBOG00000031829) #26 SPAM1 (ENSSBOG00000028163) #27 HYAL4 (ENSSBOG00000033118) #28 WASL (ENSSBOG00000035327) #29 LMOD2 (ENSSBOG00000034553) #30 ASB15 (ENSSBOG00000029369) #31 ENSSBOG00000021818 #32 ENSSBOG00000035298 #33 IQUB (ENSSBOG00000035531) #34 SLC13A1 (ENSSBOG00000023645) #35 CADPS2 (ENSSBOG00000027008) #36 ENSSBOG00000030358 #37 Capuchin MODERN SPECIES 219 FAM71F2 (ENSCCAG00000028902) #8 IMPDH (ENSCCAG00000020872) #9 PRRT4 (ENSCCAG00000024784) #10 RBM28 (ENSCCAG00000035105) #11 ENSCCAG00000022053 #12 LEP (ENSCCAG00000032161) #13 ENSCCAG00000025380 LRRC4 (ENSCCAG00000002650) #15 ENSCCAG00000014968 SND1 (ENSCCAG00000036847) #14 PAX4 (ENSCCAG00000005730) #16 FSCN3 (ENSCCAG00000026519) #17 ENSCCAG00000027943 #18 GCC1 (ENSCCAG00000022144) #19 ZNF800 (ENSCCAG00000021078) #20 GRM8 (ENSCCAG00000020804) #22 Marmoset MODERN SPECIES 20 GARIN1B (ENSCJAG00000017818) #7 ENSCJAG00000070472 GARIN1A (ENSCJAG00000017814) #8 ENSCJAG00000072209 ENSCJAG00000017770 #9 PRRT4 (ENSCJAG00000041855) #10 RBM28 (ENSCJAG00000017731) #11 LEP (ENSCJAG00000017729) #13 SND1 (ENSCJAG00000017668) #14 LRRC4 (ENSCJAG00000045218) #15 PAX4 (ENSCJAG00000017652) #16 FSCN3 (ENSCJAG00000017639) #17 ARF5 (ENSCJAG00000017604) #18 GCC1 (ENSCJAG00000017602) #19 ZNF800 (ENSCJAG00000017598) #20 GRM8 (ENSCJAG00000017585) #22 ENSCJAG00000063994 ENSCJAG00000042709 ENSCJAG00000081061 POT1 (ENSCJAG00000017555) #24 ENSCJAG00000017553 #25 GPR37 (ENSCJAG00000017546) #26 ENSCJAG00000081560 ENSCJAG00000077091 TMEM229A (ENSCJAG00000017545) SPAM1 (ENSCJAG00000017536) #27 HYAL4 (ENSCJAG00000017533) #28 WASL (ENSCJAG00000038944) #29 LMOD2 (ENSCJAG00000017483) #30 ASB15 (ENSCJAG00000017456) #31 ENSCJAG00000083655 ##32 Mas night monkey MODERN SPECIES 299 GARIN1B (ENSANAG00000027825) #7 GARIN1A (ENSANAG00000029574) #8 ENSANAG00000025900 ENSANAG00000037340 #9 PRRT4 (ENSANAG00000009262) #10 RBM28 (ENSANAG00000033922) #11 ENSANAG00000026541 #12 LEP (ENSANAG00000026453) #13 LRRC4 (ENSANAG00000022458) #15 SND1 (ENSANAG00000034463) #14 PAX4 (ENSANAG00000036211) #16 FSCN3 (ENSANAG00000030175) #17 ARF5 (ENSANAG00000026446) #18 GCC1 (ENSANAG00000026102) #19 ZNF800 (ENSANAG00000034503) #20 GRM8 (ENSANAG00000032389) #22 POT1 (ENSANAG00000027812) #24 ENSANAG00000036414 #25 GPR37 (ENSANAG00000030165) #26 TMEM229A (ENSANAG00000018854) SPAM1 (ENSANAG00000027369) #27 HYAL4 (ENSANAG00000024876) #28 WASL (ENSANAG00000002693) #29 LMOD2 (ENSANAG00000037267) #30 ASB15 (ENSANAG00000036619) #31 ENSANAG00000033278 #32 IQUB (ENSANAG00000031863) #34 SLC13A1 (ENSANAG00000023737) #35 ENSANAG00000032957 #37 CADPS2 (ENSANAG00000033191) #36 FEZF1 (ENSANAG00000036057) Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 Cercopithecinae_d ANCESTRAL SPECIES 24 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Sooty mangabey MODERN SPECIES 283 CALU (ENSCATG00000045109) GARIN1B (ENSCATG00000040551) #7 GARIN1A (ENSCATG00000035689) #8 HILPDA (ENSCATG00000014956) IMPDH1 (ENSCATG00000044375) ##9 PRRT4 (ENSCATG00000039412) #10 RBM28 (ENSCATG00000040497) #11 LEP (ENSCATG00000031090) #13 LRRC4 (ENSCATG00000039367) #15 SND1 (ENSCATG00000035214) #14 PAX4 (ENSCATG00000019674) #16 FSCN3 (ENSCATG00000033014) #17 ARF5 (ENSCATG00000010217) #18 GCC1 (ENSCATG00000035591) #19 ZNF800 (ENSCATG00000043593) #20 GRM8 (ENSCATG00000033381) #22 POT1 (ENSCATG00000029694) #24 ENSCATG00000013777 #25 GPR37 (ENSCATG00000044004) #26 TMEM229A (ENSCATG00000015411) SPAM1 (ENSCATG00000033464) #27 HYAL4 (ENSCATG00000037698) #28 WASL (ENSCATG00000039720) #29 LMOD2 (ENSCATG00000032642) #30 ASB15 (ENSCATG00000040240) #31 NDUFA5 (ENSCATG00000034799) #32 IQUB (ENSCATG00000042016) #34 SLC13A1 (ENSCATG00000044783) #35 ENSCATG00000041130 #37 CADPS2 (ENSCATG00000017941) #36 FEZF1 (ENSCATG00000037503) Drill MODERN SPECIES 1191 GARIN1B (ENSMLEG00000036468) #7 ENSMLEG00000035321 #8 HILPDA (ENSMLEG00000027323) IMPDH1 (ENSMLEG00000037858) ##9 ENSMLEG00000006201 #10 RBM28 (ENSMLEG00000037717) #11 LEP (ENSMLEG00000041444) #13 SND1 (ENSMLEG00000029040) #14 LRRC4 (ENSMLEG00000005660) #15 PAX4 (ENSMLEG00000039701) #16 FSCN3 (ENSMLEG00000008758) #17 ARF5 (ENSMLEG00000039540) #18 GCC1 (ENSMLEG00000031210) #19 ZNF800 (ENSMLEG00000021544) #20 ENSMLEG00000032049 #21 GRM8 (ENSMLEG00000037400) #22 ENSMLEG00000014896 POT1 (ENSMLEG00000041260) #24 ENSMLEG00000036864 #25 GPR37 (ENSMLEG00000005601) #26 SPAM1 (ENSMLEG00000043945) #27 HYAL4 (ENSMLEG00000041426) #28 WASL (ENSMLEG00000038405) #29 LMOD2 (ENSMLEG00000032109) #30 ASB15 (ENSMLEG00000030309) #31 NDUFA5 (ENSMLEG00000034267) #32 IQUB (ENSMLEG00000005762) #34 SLC13A1 (ENSMLEG00000031772) #35 CADPS2 (ENSMLEG00000043425) #36 ENSMLEG00000040871 #37 FEZF1 (ENSMLEG00000034221) Olive baboon MODERN SPECIES 14 GARIN1B (ENSPANG00000021952) #7 GARIN1A (ENSPANG00000022684) #8 ENSPANG00000043463 IMPDH1 (ENSPANG00000011996) ##9 PRRT4 (ENSPANG00000048387) #10 RBM28 (ENSPANG00000022295) #11 ENSPANG00000049281 #12 LEP (ENSPANG00000000989) #13 SND1 (ENSPANG00000011997) #14 LRRC4 (ENSPANG00000000836) #15 PAX4 (ENSPANG00000010445) #16 FSCN3 (ENSPANG00000022296) #17 ARF5 (ENSPANG00000032970) #18 GCC1 (ENSPANG00000024025) #19 ZNF800 (ENSPANG00000009849) #20 GRM8 (ENSPANG00000015850) #22 ENSPANG00000051293 ENSPANG00000009595 ENSPANG00000010143 POT1 (ENSPANG00000020726) #24 ENSPANG00000031266 #25 GPR37 (ENSPANG00000049442) #26 ENSPANG00000046524 ENSPANG00000038479 ENSPANG00000011912 #27 ENSPANG00000050454 #28 ENSPANG00000045787 ##28 ENSPANG00000050208 ENSPANG00000038942 #27 ENSPANG00000037264 #28 ENSPANG00000048863 ##28 Macaca ANCESTRAL SPECIES 3 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Macaca_a ANCESTRAL SPECIES 7 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000163244.d.b.a.b.b.b.b.a.b.a ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Rhesus MODERN SPECIES 13 GARIN1B (ENSMMUG00000009612) #7 GARIN1A (ENSMMUG00000014512) #8 ENSMMUG00000059386 IMPDH1 (ENSMMUG00000014509) ##9 PRRT4 (ENSMMUG00000037473) #10 RBM28 (ENSMMUG00000007250) #11 LEP (ENSMMUG00000005322) #13 ENSMMUG00000055746 LRRC4 (ENSMMUG00000015436) #15 SND1 (ENSMMUG00000015432) #14 PAX4 (ENSMMUG00000015429) #16 FSCN3 (ENSMMUG00000015427) #17 ARF5 (ENSMMUG00000046381) #18 GCC1 (ENSMMUG00000015421) #19 ZNF800 (ENSMMUG00000002428) #20 GRM8 (ENSMMUG00000015240) #22 POT1 (ENSMMUG00000020587) #24 ENSMMUG00000041957 #25 GPR37 (ENSMMUG00000010664) #26 ENSMMUG00000054565 TMEM229A (ENSMMUG00000049185) SPAM1 (ENSMMUG00000005719) #27 HYAL4 (ENSMMUG00000005718) #28 ENSMMUG00000043306 ##28 WASL (ENSMMUG00000011544) #29 ENSMMUG00000060087 LMOD2 (ENSMMUG00000011542) #30 ASB15 (ENSMMUG00000011541) #31 ENSMMUG00000063547 NDUFA5 (ENSMMUG00000017321) #32 IQUB (ENSMMUG00000011536) #34 Crab-eating macaque MODERN SPECIES 13 CALU (ENSMFAG00000033268) GARIN1B (ENSMFAG00000000842) #7 GARIN1A (ENSMFAG00000045927) #8 ENSMFAG00000050825 IMPDH1 (ENSMFAG00000035403) ##9 ENSMFAG00000046010 #10 RBM28 (ENSMFAG00000031036) #11 LEP (ENSMFAG00000044033) #13 LRRC4 (ENSMFAG00000040001) #15 SND1 (ENSMFAG00000038114) #14 PAX4 (ENSMFAG00000040823) #16 FSCN3 (ENSMFAG00000036958) #17 ARF5 (ENSMFAG00000019772) #18 ENSMFAG00000038295 #19 ZNF800 (ENSMFAG00000000453) #20 GRM8 (ENSMFAG00000000810) #22 ENSMFAG00000030362 POT1 (ENSMFAG00000001359) #24 ENSMFAG00000042462 #25 GPR37 (ENSMFAG00000036183) #26 ENSMFAG00000002556 ENSMFAG00000057327 ENSMFAG00000062534 SPAM1 (ENSMFAG00000033680) #27 HYAL4 (ENSMFAG00000042410) #28 ENSMFAG00000060531 ##28 WASL (ENSMFAG00000043459) #29 LMOD2 (ENSMFAG00000001768) #30 ASB15 (ENSMFAG00000042819) #31 NDUFA5 (ENSMFAG00000047182) #32 IQUB (ENSMFAG00000038536) #34 Pig-tailed macaque MODERN SPECIES 95 CALU (ENSMNEG00000029701) GARIN1B (ENSMNEG00000028954) #7 GARIN1A (ENSMNEG00000028708) #8 IMPDH1 (ENSMNEG00000031042) ##9 PRRT4 (ENSMNEG00000031115) #10 RBM28 (ENSMNEG00000036970) #11 LEP (ENSMNEG00000034814) #13 SND1 (ENSMNEG00000039808) #14 LRRC4 (ENSMNEG00000037000) #15 PAX4 (ENSMNEG00000043809) #16 FSCN3 (ENSMNEG00000042501) #17 ARF5 (ENSMNEG00000040893) #18 GCC1 (ENSMNEG00000043499) #19 ZNF800 (ENSMNEG00000041752) #20 ENSMNEG00000003199 #21 GRM8 (ENSMNEG00000039046) #22 ENSMNEG00000010937 ENSMNEG00000034791 POT1 (ENSMNEG00000029873) #24 ENSMNEG00000043524 #25 GPR37 (ENSMNEG00000037150) #26 TMEM229A (ENSMNEG00000038128) SPAM1 (ENSMNEG00000034544) #27 HYAL4 (ENSMNEG00000036511) #28 WASL (ENSMNEG00000035595) #29 LMOD2 (ENSMNEG00000031393) #30 ASB15 (ENSMNEG00000041583) #31 NDUFA5 (ENSMNEG00000039718) #32 IQUB (ENSMNEG00000032100) #34 SLC13A1 (ENSMNEG00000035147) #35 CADPS2 (ENSMNEG00000009908) #36 Vervet Monkey MODERN SPECIES 13 CALU (ENSCSAG00000010054) GARIN1B (ENSCSAG00000010065) #7 GARIN1A (ENSCSAG00000010068) #8 HILPDA (ENSCSAG00000010075) IMPDH1 (ENSCSAG00000010128) ##9 PRRT4 (ENSCSAG00000010151) #10 RBM28 (ENSCSAG00000010161) #11 LEP (ENSCSAG00000010170) #13 LRRC4 (ENSCSAG00000019137) #15 SND1 (ENSCSAG00000010182) #14 PAX4 (ENSCSAG00000010195) #16 FSCN3 (ENSCSAG00000010205) #17 ARF5 (ENSCSAG00000010208) #18 GCC1 (ENSCSAG00000010213) #19 ZNF800 (ENSCSAG00000010217) #20 GRM8 (ENSCSAG00000010225) #22 ENSCSAG00000019136 ENSCSAG00000010237 POT1 (ENSCSAG00000010245) #24 GPR37 (ENSCSAG00000010249) #26 TMEM229A (ENSCSAG00000019135) SPAM1 (ENSCSAG00000010253) #27 HYAL4 (ENSCSAG00000010260) #28 WASL (ENSCSAG00000010265) #29 LMOD2 (ENSCSAG00000010272) #30 ASB15 (ENSCSAG00000010284) #31 NDUFA5 (ENSCSAG00000010289) #32 IQUB (ENSCSAG00000010294) #34 SLC13A1 (ENSCSAG00000010311) #35 TAS2R16 (ENSCSAG00000019134) RNF148 (ENSCSAG00000019133) #37 Rhinopithecus ANCESTRAL SPECIES 90 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 Black snub-nosed monkey MODERN SPECIES 467 ENSRBIG00000027782 #14 PAX4 (ENSRBIG00000032983) #16 FSCN3 (ENSRBIG00000037881) #17 ARF5 (ENSRBIG00000039868) #18 GCC1 (ENSRBIG00000028126) #19 ENSRBIG00000015509 ZNF800 (ENSRBIG00000035623) #20 GRM8 (ENSRBIG00000015208) #22 POT1 (ENSRBIG00000040275) #24 ENSRBIG00000043778 #25 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2112 GARIN1B (ENSRROG00000045564) #7 GARIN1A (ENSRROG00000035800) #8 HILPDA (ENSRROG00000022886) IMPDH1 (ENSRROG00000045406) ##9 PRRT4 (ENSRROG00000042520) #10 RBM28 (ENSRROG00000040747) #11 LEP (ENSRROG00000033244) #13 LRRC4 (ENSRROG00000032151) #15 SND1 (ENSRROG00000033020) #14 PAX4 (ENSRROG00000015595) #16 FSCN3 (ENSRROG00000042888) #17 ARF5 (ENSRROG00000041157) #18 GCC1 (ENSRROG00000031945) #19 ENSRROG00000029281 ZNF800 (ENSRROG00000040558) #20 ENSRROG00000016696 #22 Golden snub-nosed monkey MODERN SPECIES 3324 ENSRROG00000035952 #22 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT00950000182810.A.a.a.mb.a #21 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00940000154326.a.b.b.m.b.b ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.d #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Gibbon MODERN SPECIES 3 ENSNLEG00000012374 #7 ENSNLEG00000012368 #8 HILPDA (ENSNLEG00000028127) ENSNLEG00000012341 ##9 PRRT4 (ENSNLEG00000012335) #10 RBM28 (ENSNLEG00000012307) #11 LEP (ENSNLEG00000012302) #13 LRRC4 (ENSNLEG00000035843) #15 SND1 (ENSNLEG00000012263) #14 PAX4 (ENSNLEG00000012257) #16 FSCN3 (ENSNLEG00000012245) #17 ENSNLEG00000030696 #18 GCC1 (ENSNLEG00000012234) #19 ZNF800 (ENSNLEG00000012232) #20 ENSNLEG00000033122 #21 GRM8 (ENSNLEG00000012231) #22 ENSNLEG00000012225 POT1 (ENSNLEG00000012201) #24 ENSNLEG00000033858 #25 GPR37 (ENSNLEG00000012200) #26 ENSNLEG00000031959 TMEM229A (ENSNLEG00000018603) SPAM1 (ENSNLEG00000012189) #27 HYAL4 (ENSNLEG00000012182) #28 WASL (ENSNLEG00000012159) #29 LMOD2 (ENSNLEG00000012153) #30 ASB15 (ENSNLEG00000012140) #31 NDUFA5 (ENSNLEG00000030214) #32 IQUB (ENSNLEG00000012115) #34 SLC13A1 (ENSNLEG00000012101) #35 ENSNLEG00000030675 #37 Hominidae ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010165.i.b.b.b.c ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.d #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Orangutan MODERN SPECIES 20 GARIN1A (ENSPPYG00000017980) #8 ENSPPYG00000035564 ENSPPYG00000033487 ENSPPYG00000037429 IMPDH1 (ENSPPYG00000017976) ##9 PRRT4 (ENSPPYG00000039151) #10 RBM28 (ENSPPYG00000017975) #11 LEP (ENSPPYG00000017974) #13 LRRC4 (ENSPPYG00000017973) #15 SND1 (ENSPPYG00000017972) #14 PAX4 (ENSPPYG00000017971) #16 FSCN3 (ENSPPYG00000017970) #17 ARF5 (ENSPPYG00000017969) #18 GCC1 (ENSPPYG00000017968) #19 ZNF800 (ENSPPYG00000017967) #20 GRM8 (ENSPPYG00000017966) #22 POT1 (ENSPPYG00000017964) #24 ENSPPYG00000037399 #25 GPR37 (ENSPPYG00000017963) #26 SSU72L6 (ENSPPYG00000017962) TMEM229A (ENSPPYG00000030387) SPAM1 (ENSPPYG00000017961) #27 HYAL4 (ENSPPYG00000017960) #28 ENSPPYG00000032008 ##28 WASL (ENSPPYG00000017959) #29 LMOD2 (ENSPPYG00000017958) #30 ASB15 (ENSPPYG00000017957) #31 NDUFA5 (ENSPPYG00000017956) #32 IQUB (ENSPPYG00000017955) #34 SLC13A1 (ENSPPYG00000017954) #35 TAS2R16 (ENSPPYG00000017953) Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00910000147243 ENSGT00940000156059.k ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010165.i.b.b.b.c ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.d #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Gorilla MODERN SPECIES 20 ENSGGOG00000040589 HILPDA (ENSGGOG00000038597) IMPDH (ENSGGOG00000003963) ##9 ENSGGOG00000043536 #10 RBM28 (ENSGGOG00000004644) #11 ENSGGOG00000027258 #12 LEP (ENSGGOG00000000956) #13 LRRC4 (ENSGGOG00000009627) #15 ENSGGOG00000040596 SND1 (ENSGGOG00000009614) #14 PAX4 (ENSGGOG00000002555) #16 FSCN3 (ENSGGOG00000016761) #17 ARF5 (ENSGGOG00000016749) #18 GCC1 (ENSGGOG00000008848) #19 ZNF800 (ENSGGOG00000028009) #20 GRM8 (ENSGGOG00000043866) #22 POT1 (ENSGGOG00000014687) #24 ENSGGOG00000024670 #25 GPR37 (ENSGGOG00000004389) #26 SSU72P8 (ENSGGOG00000027176) TMEM229A (ENSGGOG00000026685) SPAM1 (ENSGGOG00000006946) #27 HYAL4 (ENSGGOG00000006314) #28 WASL (ENSGGOG00000024699) #29 LMOD2 (ENSGGOG00000004684) #30 ASB15 (ENSGGOG00000008574) #31 NDUFA5 (ENSGGOG00000022922) #32 IQUB (ENSGGOG00000015921) #34 SLC13A1 (ENSGGOG00000006358) #35 TAS2R16 (ENSGGOG00000010354) ENSGGOG00000042593 #37 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000161358.c.a ENSGT00940000156059.k ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00390000010165.i.b.b.b.c ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.d #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Human MODERN SPECIES 19 GARIN1B (ENSG00000135248) #7 GARIN1A (ENSG00000205085) #8 METTL2B (ENSG00000165055) HILPDA (ENSG00000135245) IMPDH1 (ENSG00000106348) ##9 PRRT4 (ENSG00000224940) #10 RBM28 (ENSG00000106344) #11 LEP (ENSG00000174697) #13 LRRC4 (ENSG00000128594) #15 SND1 (ENSG00000197157) #14 PAX4 (ENSG00000106331) #16 FSCN3 (ENSG00000106328) #17 ARF5 (ENSG00000004059) #18 GCC1 (ENSG00000179562) #19 ZNF800 (ENSG00000048405) #20 GRM8 (ENSG00000179603) #22 POT1 (ENSG00000128513) #24 GPR37 (ENSG00000170775) #26 SSU72L6 (ENSG00000230268) TMEM229A (ENSG00000234224) SPAM1 (ENSG00000106304) #27 HYAL4 (ENSG00000106302) #28 WASL (ENSG00000106299) #29 LMOD2 (ENSG00000170807) #30 ASB15 (ENSG00000146809) #31 NDUFA5 (ENSG00000128609) #32 IQUB (ENSG00000164675) #34 SLC13A1 (ENSG00000081800) #35 TAS2R16 (ENSG00000128519) RNF148 (ENSG00000235631) #37 RNF133 (ENSG00000188050) Pan ANCESTRAL SPECIES 13 ENSGT00940000161358.c.a ENSGT00940000156059.k ENSGT00390000014201 ENSGT00940000154156.d.n.a.b ##9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00550000076332 #12 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT00560000078501 #25 ENSGT01100000263518.B.b.b #26 ENSGT00940000154326.a.b.b.m.b.b ENSGT00390000010165.i.b.b.b.c ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.w.b.d #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Bonobo MODERN SPECIES 20 GARIN1A (ENSPPAG00000036357) #8 ENSPPAG00000041977 HILPDA (ENSPPAG00000022117) IMPDH1 (ENSPPAG00000037421) ##9 ENSPPAG00000030645 #10 RBM28 (ENSPPAG00000041730) #11 ENSPPAG00000001828 #12 LEP (ENSPPAG00000035749) #13 LRRC4 (ENSPPAG00000029697) #15 SND1 (ENSPPAG00000042947) #14 PAX4 (ENSPPAG00000033297) #16 FSCN3 (ENSPPAG00000043161) #17 ARF5 (ENSPPAG00000037755) #18 GCC1 (ENSPPAG00000041247) #19 ZNF800 (ENSPPAG00000024670) #20 ENSPPAG00000000613 #22 POT1 (ENSPPAG00000037505) #24 GPR37 (ENSPPAG00000030639) #26 ENSPPAG00000009718 SSU72L6 (ENSPPAG00000018576) TMEM229A (ENSPPAG00000025031) SPAM1 (ENSPPAG00000000072) #27 HYAL4 (ENSPPAG00000044144) #28 WASL (ENSPPAG00000036891) #29 LMOD2 (ENSPPAG00000034549) #30 ASB15 (ENSPPAG00000030252) #31 NDUFA5 (ENSPPAG00000043654) #32 IQUB (ENSPPAG00000036104) #34 SLC13A1 (ENSPPAG00000040216) #35 TAS2R16 (ENSPPAG00000000642) ENSPPAG00000027242 #37 Chimpanzee MODERN SPECIES 20 ENSPTRG00000019664 ENSPTRG00000049622 HILPDA (ENSPTRG00000043255) IMPDH1 (ENSPTRG00000019660) ##9 PRRT4 (ENSPTRG00000041628) #10 RBM28 (ENSPTRG00000019659) #11 ENSPTRG00000044947 #12 LEP (ENSPTRG00000047519) #13 LRRC4 (ENSPTRG00000019656) #15 SND1 (ENSPTRG00000023911) #14 PAX4 (ENSPTRG00000019653) #16 FSCN3 (ENSPTRG00000019652) #17 ARF5 (ENSPTRG00000019651) #18 GCC1 (ENSPTRG00000019650) #19 ZNF800 (ENSPTRG00000019649) #20 GRM8 (ENSPTRG00000043957) #22 POT1 (ENSPTRG00000022535) #24 LINC03043 (ENSPTRG00000045666) #25 GPR37 (ENSPTRG00000019646) #26 ENSPTRG00000047742 SSU72L6 (ENSPTRG00000048973) TMEM229A (ENSPTRG00000039001) SPAM1 (ENSPTRG00000019643) #27 HYAL4 (ENSPTRG00000019642) #28 WASL (ENSPTRG00000019640) #29 LMOD2 (ENSPTRG00000019639) #30 ASB15 (ENSPTRG00000019638) #31 NDUFA5 (ENSPTRG00000019637) #32 IQUB (ENSPTRG00000019636) #34 SLC13A1 (ENSPTRG00000019635) #35 TAS2R16 (ENSPTRG00000019634) Tarsier DUPLICATION Tarsier MODERN SPECIES 2024 ENSTSYG00000034332 #22 Tarsier MODERN SPECIES 6404 ENSTSYG00000005069 #22 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.m.a.a #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.n #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 Bushbaby MODERN SPECIES 152 CALU (ENSOGAG00000009814) GARIN1B (ENSOGAG00000009808) #7 GARIN1A (ENSOGAG00000009804) #8 IMPDH1 (ENSOGAG00000009795) #9 PRRT4 (ENSOGAG00000026147) #10 RBM28 (ENSOGAG00000006011) #11 LEP (ENSOGAG00000006021) #13 SND1 (ENSOGAG00000013356) #14 LRRC4 (ENSOGAG00000027715) #15 PAX4 (ENSOGAG00000013348) #16 FSCN3 (ENSOGAG00000013339) #17 ARF5 (ENSOGAG00000013336) #18 GCC1 (ENSOGAG00000033355) #19 ENSOGAG00000026315 ZNF800 (ENSOGAG00000000339) #20 GRM8 (ENSOGAG00000011035) #22 ENSOGAG00000031070 POT1 (ENSOGAG00000002401) #24 GPR37 (ENSOGAG00000002400) #26 TMEM229A (ENSOGAG00000025014) ENSOGAG00000000296 #27 ENSOGAG00000000295 #27 ENSOGAG00000033573 ##28 ENSOGAG00000027679 #27 HYAL4 (ENSOGAG00000009563) #28 WASL (ENSOGAG00000007616) #29 ENSOGAG00000025472 LMOD2 (ENSOGAG00000032855) #30 ASB15 (ENSOGAG00000007610) #31 NDUFA5 (ENSOGAG00000033137) #32 IQUB (ENSOGAG00000001073) #34 Lemuriformes ANCESTRAL SPECIES 4 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.a.m.a.a #27 ENSGT01020000230364.a.b ##28 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.u.a #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 Mouse lemur MODERN SPECIES 2 OPN1SW (ENSMICG00000045275) CALU (ENSMICG00000000120) GARIN1B (ENSMICG00000036122) #7 GARIN1A (ENSMICG00000000114) #8 IMPDH1 (ENSMICG00000000111) #9 PRRT4 (ENSMICG00000027302) #10 RBM28 (ENSMICG00000000107) #11 LEP (ENSMICG00000031814) #13 SND1 (ENSMICG00000000097) #14 LRRC4 (ENSMICG00000000102) #15 PAX4 (ENSMICG00000000095) #16 FSCN3 (ENSMICG00000000092) #17 ARF5 (ENSMICG00000000091) #18 GCC1 (ENSMICG00000037038) #19 ZNF800 (ENSMICG00000030435) #20 GRM8 (ENSMICG00000008884) #22 ENSMICG00000046753 ENSMICG00000007980 POT1 (ENSMICG00000035779) #24 ENSMICG00000034381 ENSMICG00000036881 GPR37 (ENSMICG00000000767) #26 ENSMICG00000028787 ENSMICG00000026788 ENSMICG00000034829 ENSMICG00000028670 SPAM1 (ENSMICG00000037909) #27 TMEM229A (ENSMICG00000029802) HYAL4 (ENSMICG00000030714) #28 WASL (ENSMICG00000038346) #29 LMOD2 (ENSMICG00000032173) #30 Lemuriformes_a ANCESTRAL SPECIES 111 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 Greater bamboo lemur MODERN SPECIES 38 IMPDH1 (ENSPSMG00000006173) #9 PRRT4 (ENSPSMG00000006235) #10 RBM28 (ENSPSMG00000006274) #11 LEP (ENSPSMG00000006319) #13 SND1 (ENSPSMG00000006450) #14 LRRC4 (ENSPSMG00000006533) #15 PAX4 (ENSPSMG00000006575) #16 FSCN3 (ENSPSMG00000006628) #17 ARF5 (ENSPSMG00000006701) #18 GCC1 (ENSPSMG00000006806) #19 ZNF800 (ENSPSMG00000006834) #20 GRM8 (ENSPSMG00000006852) #22 POT1 (ENSPSMG00000006943) #24 GPR37 (ENSPSMG00000007027) #26 ENSPSMG00000007031 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 820 ZNF800 (ENSPCOG00000014678) #20 ENSPCOG00000025287 #22 Coquerels sifaka MODERN SPECIES 597 ENSPCOG00000000077 #22 Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Tree shrew MODERN SPECIES 4241 GRM8 (ENSTBEG00000005308) #22 Glires ANCESTRAL SPECIES 18 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Rodentia ANCESTRAL SPECIES 12 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Rodentia_A ANCESTRAL SPECIES 12 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Sciuridae ANCESTRAL SPECIES 7 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 Eurasian red squirrel MODERN SPECIES 17 GARIN1A (ENSSVLG00005006434) #8 HILPDA (ENSSVLG00005006462) ENSSVLG00005006479 IMPDH1 (ENSSVLG00005006574) #9 PRRT4 (ENSSVLG00005006756) #10 RBM28 (ENSSVLG00005006856) #11 LEP (ENSSVLG00005006935) #13 SND1 (ENSSVLG00005006972) #14 LRRC4 (ENSSVLG00005007018) #15 ENSSVLG00005007031 PAX4 (ENSSVLG00005007068) #16 FSCN3 (ENSSVLG00005007223) #17 ARF5 (ENSSVLG00005007263) #18 GCC1 (ENSSVLG00005007286) #19 ZNF800 (ENSSVLG00005007309) #20 GRM8 (ENSSVLG00005007347) #22 TEAD2 (ENSSVLG00005007471) POT1 (ENSSVLG00005007551) #24 GPR37 (ENSSVLG00005007725) #26 ENSSVLG00005007773 TMEM229A (ENSSVLG00005007852) SPAM1 (ENSSVLG00005007942) #27 HYAL4 (ENSSVLG00005008218) #28 ENSSVLG00005008265 ##28 WASL (ENSSVLG00005008370) #29 LMOD2 (ENSSVLG00005008381) #30 ASB15 (ENSSVLG00005008414) #31 ENSSVLG00005008480 #32 ENSSVLG00005008606 #34 SLC13A1 (ENSSVLG00005008725) #35 TAS2R16 (ENSSVLG00005008847) Marmotini ANCESTRAL SPECIES 35 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000153314.a.a ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 Alpin marmot MODERN SPECIES 22 GARIN1A (ENSMMMG00000015879) #8 HILPDA (ENSMMMG00000015877) IMPDH1 (ENSMMMG00000015789) #9 PRRT4 (ENSMMMG00000015777) #10 RBM28 (ENSMMMG00000015736) #11 LEP (ENSMMMG00000015724) #13 ENSMMMG00000015714 LRRC4 (ENSMMMG00000015704) #15 SND1 (ENSMMMG00000015627) #14 ENSMMMG00000015616 PAX4 (ENSMMMG00000015595) #16 FSCN3 (ENSMMMG00000015585) #17 ARF5 (ENSMMMG00000015574) #18 GCC1 (ENSMMMG00000015571) #19 ZNF800 (ENSMMMG00000015549) #20 GRM8 (ENSMMMG00000015527) #22 POT1 (ENSMMMG00000015400) #24 GPR37 (ENSMMMG00000015396) #26 SPAM1 (ENSMMMG00000015253) #27 HYAL4 (ENSMMMG00000015235) #28 ENSMMMG00000015187 ##28 WASL (ENSMMMG00000015176) #29 LMOD2 (ENSMMMG00000015170) #30 ASB15 (ENSMMMG00000015148) #31 NDUFA5 (ENSMMMG00000015124) #32 IQUB (ENSMMMG00000015110) #34 SLC13A1 (ENSMMMG00000015090) #35 TAS2R16 (ENSMMMG00000015086) RNF148 (ENSMMMG00000015069) #37 CADPS2 (ENSMMMG00000015032) #36 FEZF1 (ENSMMMG00000015014) Marmotini_b ANCESTRAL SPECIES 65 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000153314.a.a ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 Arctic ground squirrel MODERN SPECIES 636 ZNF800 (ENSUPAG00010015074) #20 ENSUPAG00010015098 #22 Squirrel MODERN SPECIES 79 CALU (ENSSTOG00000022028) GARIN1B (ENSSTOG00000026261) #7 GARIN1A (ENSSTOG00000008506) #8 HILPDA (ENSSTOG00000029766) IMPDH1 (ENSSTOG00000002177) #9 PRRT4 (ENSSTOG00000023582) #10 RBM28 (ENSSTOG00000002169) #11 LEP (ENSSTOG00000027970) #13 LRRC4 (ENSSTOG00000021081) #15 SND1 (ENSSTOG00000002140) #14 PAX4 (ENSSTOG00000002127) #16 FSCN3 (ENSSTOG00000002115) #17 ARF5 (ENSSTOG00000002104) #18 GCC1 (ENSSTOG00000002099) #19 ZNF800 (ENSSTOG00000023294) #20 GRM8 (ENSSTOG00000006490) #22 AGTR2 (ENSSTOG00000012524) ENSSTOG00000007147 ENSSTOG00000029519 KLHL13 (ENSSTOG00000012035) WDR44 (ENSSTOG00000007251) DOCK11 (ENSSTOG00000007295) IL13RA1 (ENSSTOG00000024422) ENSSTOG00000022238 LONRF3 (ENSSTOG00000015024) PGRMC1 (ENSSTOG00000024047) SLC25A43 (ENSSTOG00000004872) ENSSTOG00000020438 STEEP1 (ENSSTOG00000011579) UBE2A (ENSSTOG00000011583) NKRF (ENSSTOG00000020483) Hystricomorpha ANCESTRAL SPECIES 14 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Naked mole-rat female MODERN SPECIES 5 GARIN1B (ENSHGLG00000014946) #7 GARIN1A (ENSHGLG00000013393) #8 ENSHGLG00000045038 ENSHGLG00000003834 #9 PRRT4 (ENSHGLG00000004653) #10 RBM28 (ENSHGLG00000005409) #11 LEP (ENSHGLG00000042168) #13 ENSHGLG00000042470 SND1 (ENSHGLG00000003618) #14 LRRC4 (ENSHGLG00000004237) #15 PAX4 (ENSHGLG00000004644) #16 FSCN3 (ENSHGLG00000006438) #17 ARF5 (ENSHGLG00000007494) #18 GCC1 (ENSHGLG00000050471) #19 ZNF800 (ENSHGLG00000003680) #20 ENSHGLG00000047719 #22 ENSHGLG00000047566 ENSHGLG00000008149 ENSHGLG00000010416 ENSHGLG00000032447 ENSHGLG00000005704 GSDME (ENSHGLG00000006934) PALS2 (ENSHGLG00000009245) ENSHGLG00000050185 STK31 (ENSHGLG00000008474) FAM221A (ENSHGLG00000015778) ENSHGLG00000038547 TRA2A (ENSHGLG00000012168) IGF2BP3 (ENSHGLG00000013075) ENSHGLG00000021352 ENSHGLG00000021349 Hystricomorpha_a ANCESTRAL SPECIES 43 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 ENSGT00590000083094.a.b #36 Guinea pig MODERN SPECIES 11 GARIN1B (ENSCPOG00000003688) #7 GARIN1A (ENSCPOG00000020934) #8 ENSCPOG00000037525 HILPDA (ENSCPOG00000037851) IMPDH1 (ENSCPOG00000006264) #9 PRRT4 (ENSCPOG00000040639) #10 RBM28 (ENSCPOG00000006253) #11 LEP (ENSCPOG00000034742) #13 LRRC4 (ENSCPOG00000032605) #15 SND1 (ENSCPOG00000006251) #14 PAX4 (ENSCPOG00000006244) #16 FSCN3 (ENSCPOG00000005661) #17 ARF5 (ENSCPOG00000006239) #18 GCC1 (ENSCPOG00000038340) #19 ZNF800 (ENSCPOG00000007495) #20 ENSCPOG00000024031 #22 ENSCPOG00000036366 ##22 POT1 (ENSCPOG00000014166) #24 GPR37 (ENSCPOG00000014159) #26 TMEM229A (ENSCPOG00000039455) SPAM1 (ENSCPOG00000001716) #27 HYAL4 (ENSCPOG00000013594) #28 ENSCPOG00000027329 ##28 WASL (ENSCPOG00000003284) #29 LMOD2 (ENSCPOG00000034650) #30 ASB15 (ENSCPOG00000025748) #31 NDUFA5 (ENSCPOG00000030629) #32 IQUB (ENSCPOG00000006286) #34 SLC13A1 (ENSCPOG00000006440) #35 TAS2R16 (ENSCPOG00000007419) RNF133 (ENSCPOG00000035136) Hystricomorpha_b ANCESTRAL SPECIES 85 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163928 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Degu MODERN SPECIES 201 OPN1SW (ENSODEG00000013213) CALU (ENSODEG00000011897) GARIN1B (ENSODEG00000011956) #7 GARIN1A (ENSODEG00000012901) #8 IMPDH1 (ENSODEG00000013707) #9 PRRT4 (ENSODEG00000013465) #10 ENSODEG00000013217 #11 LEP (ENSODEG00000012966) #13 LRRC4 (ENSODEG00000013567) #15 SND1 (ENSODEG00000011502) #14 PAX4 (ENSODEG00000015565) #16 FSCN3 (ENSODEG00000011950) #17 ARF5 (ENSODEG00000011800) #18 GCC1 (ENSODEG00000011696) #19 ZNF800 (ENSODEG00000012385) #20 GRM8 (ENSODEG00000012191) #22 ENSODEG00000011802 POT1 (ENSODEG00000011405) #24 GPR37 (ENSODEG00000011993) #26 Long-tailed chinchilla MODERN SPECIES 186 CALU (ENSCLAG00000005800) GARIN1B (ENSCLAG00000005300) #7 GARIN1A (ENSCLAG00000005230) #8 ENSCLAG00000005074 IMPDH1 (ENSCLAG00000004262) #9 PRRT4 (ENSCLAG00000003937) #10 RBM28 (ENSCLAG00000003707) #11 LEP (ENSCLAG00000003590) #13 LRRC4 (ENSCLAG00000003547) #15 SND1 (ENSCLAG00000011796) #14 PAX4 (ENSCLAG00000008291) #16 FSCN3 (ENSCLAG00000008067) #17 ARF5 (ENSCLAG00000007930) #18 GCC1 (ENSCLAG00000007735) #19 ZNF800 (ENSCLAG00000007288) #20 GRM8 (ENSCLAG00000004841) #22 POT1 (ENSCLAG00000004448) #24 GPR37 (ENSCLAG00000004210) #26 SPAM1 (ENSCLAG00000004068) #27 HYAL4 (ENSCLAG00000004024) #28 ENSCLAG00000003732 ##28 WASL (ENSCLAG00000003691) #29 LMOD2 (ENSCLAG00000003580) #30 ASB15 (ENSCLAG00000007102) #31 NDUFA5 (ENSCLAG00000006860) #32 IQUB (ENSCLAG00000006424) #34 SLC13A1 (ENSCLAG00000011173) #35 RNF133 (ENSCLAG00000016991) CADPS2 (ENSCLAG00000008518) #36 FEZF1 (ENSCLAG00000007477) AASS (ENSCLAG00000008604) Rodentia_B ANCESTRAL SPECIES 9 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Kangaroo rat MODERN SPECIES 367 Opn1sw (ENSDORG00000015986) Calu (ENSDORG00000015990) Garin1b (ENSDORG00000007174) #7 Garin1a (ENSDORG00000010506) #8 Impdh1 (ENSDORG00000015870) #9 Prrt4 (ENSDORG00000028011) #10 ENSDORG00000028147 #11 Rbm28 (ENSDORG00000004184) #11 Lep (ENSDORG00000004170) #13 Snd1 (ENSDORG00000000336) #14 Lrrc4 (ENSDORG00000023470) #15 Pax4 (ENSDORG00000000332) #16 Fscn3 (ENSDORG00000000330) #17 Gcc1 (ENSDORG00000024135) #19 Zfp800 (ENSDORG00000029548) #20 Grm8 (ENSDORG00000006238) #22 ENSDORG00000004691 #24 Gpr37 (ENSDORG00000004690) #26 Tmem229a (ENSDORG00000027233) ENSDORG00000012922 #27 ENSDORG00000024484 #27 Hyal4 (ENSDORG00000006155) #28 Hyal6 (ENSDORG00000025388) ##28 Wasl (ENSDORG00000011793) #29 Lmod2 (ENSDORG00000027666) #30 Asb15 (ENSDORG00000011790) #31 Ndufa5 (ENSDORG00000027239) #32 Iqub (ENSDORG00000014986) #34 ENSDORG00000030217 Slc13a1 (ENSDORG00000000630) #35 Cadps2 (ENSDORG00000016250) #36 Myomorpha ANCESTRAL SPECIES 8 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Lesser Egyptian jerboa MODERN SPECIES 67 ENSJJAG00000016808 #8 Impdh1 (ENSJJAG00000010897) #9 Prrt4 (ENSJJAG00000019105) #10 Rbm28 (ENSJJAG00000022400) #11 Lep (ENSJJAG00000024396) #13 Lrrc4 (ENSJJAG00000024325) #15 Snd1 (ENSJJAG00000009561) #14 Pax4 (ENSJJAG00000009380) #16 Fscn3 (ENSJJAG00000011253) #17 Arf5 (ENSJJAG00000005105) #18 Gcc1 (ENSJJAG00000000812) #19 Grm8 (ENSJJAG00000016613) #22 ENSJJAG00000010202 #24 Gpr37 (ENSJJAG00000014629) #26 ENSJJAG00000011611 Tmem229a (ENSJJAG00000012347) ENSJJAG00000011717 #27 ENSJJAG00000022467 #27 Hyal4 (ENSJJAG00000020961) #28 Hyal6 (ENSJJAG00000018979) ##28 Wasl (ENSJJAG00000010164) #29 Lmod2 (ENSJJAG00000001036) #30 Asb15 (ENSJJAG00000012943) #31 ENSJJAG00000010459 #32 Slc13a1 (ENSJJAG00000022062) #35 ENSJJAG00000010213 Tas2r118 (ENSJJAG00000000517) Muroidea ANCESTRAL SPECIES 8 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1325 Garin1b (ENSNGAG00000007899) #7 Garin1a (ENSNGAG00000010614) #8 Hilpda (ENSNGAG00000016167) Impdh1 (ENSNGAG00000005531) #9 Prrt4 (ENSNGAG00000018200) #10 ENSNGAG00000006480 #11 Lep (ENSNGAG00000010451) #13 Snd1 (ENSNGAG00000011186) #14 Lrrc4 (ENSNGAG00000019454) #15 ENSNGAG00000008360 Pax4 (ENSNGAG00000018745) #16 Fscn3 (ENSNGAG00000010217) #17 Arf5 (ENSNGAG00000011743) #18 Gcc1 (ENSNGAG00000017580) #19 ENSNGAG00000000190 #20 Grm8 (ENSNGAG00000009913) #22 Muroidea_A ANCESTRAL SPECIES 4 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Murinae ANCESTRAL SPECIES 4 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Mus ANCESTRAL SPECIES 20 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Mus_A ANCESTRAL SPECIES 7 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.i #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Mus_B ANCESTRAL SPECIES 20 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.i #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Mus_C ANCESTRAL SPECIES 19 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.i #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Steppe mouse MODERN SPECIES 3280 Calu (ENSMSIG00000024426) Garin1b (ENSMSIG00000024512) #7 Garin1a (ENSMSIG00000024563) #8 Hilpda (ENSMSIG00000024578) Impdh1 (ENSMSIG00000024596) #9 Prrt4 (ENSMSIG00000025011) #10 Rbm28 (ENSMSIG00000025020) #11 Lep (ENSMSIG00000025061) #13 Snd1 (ENSMSIG00000025077) #14 Lrrc4 (ENSMSIG00000025175) #15 Pax4 (ENSMSIG00000025196) #16 Fscn3 (ENSMSIG00000025356) #17 Gcc1 (ENSMSIG00000025373) #19 Arf5 (ENSMSIG00000025399) #18 Zfp800 (ENSMSIG00000001989) #20 Grm8 (ENSMSIG00000002036) #22 spretus MODERN SPECIES 15 Calu (MGP_SPRETEiJ_G0029168) Garin1b (MGP_SPRETEiJ_G0029167) #7 Garin1a (MGP_SPRETEiJ_G0029166) #8 Hilpda (MGP_SPRETEiJ_G0029165) Impdh1 (MGP_SPRETEiJ_G0029164) #9 Prrt4 (MGP_SPRETEiJ_G0029163) #10 Rbm28 (MGP_SPRETEiJ_G0029162) #11 Lep (MGP_SPRETEiJ_G0029161) #13 Lrrc4 (MGP_SPRETEiJ_G0029160) #15 Snd1 (MGP_SPRETEiJ_G0029159) #14 Pax4 (MGP_SPRETEiJ_G0029158) #16 Fscn3 (MGP_SPRETEiJ_G0029157) #17 Arf5 (MGP_SPRETEiJ_G0029156) #18 Gcc1 (MGP_SPRETEiJ_G0029155) #19 Zfp800 (MGP_SPRETEiJ_G0029154) #20 Grm8 (MGP_SPRETEiJ_G0029153) #22 Pot1a (MGP_SPRETEiJ_G0029152) #24 Gpr37 (MGP_SPRETEiJ_G0029151) #26 Tmem229a (MGP_SPRETEiJ_G0029150) Hyal5 (MGP_SPRETEiJ_G0029149) #27 Spam1 (MGP_SPRETEiJ_G0029148) #27 Hyal4 (MGP_SPRETEiJ_G0029147) #28 Hyal6 (MGP_SPRETEiJ_G0029146) ##28 Wasl (MGP_SPRETEiJ_G0029145) #29 Lmod2 (MGP_SPRETEiJ_G0029144) #30 Asb15 (MGP_SPRETEiJ_G0029143) #31 Ndufa5 (MGP_SPRETEiJ_G0029142) #32 Iqub (MGP_SPRETEiJ_G0029141) #34 Slc13a1 (MGP_SPRETEiJ_G0029140) #35 Tas2r118 (MGP_SPRETEiJ_G0029139) Rnf148 (MGP_SPRETEiJ_G0029138) #37 Mouse MODERN SPECIES 15 Calu (ENSMUSG00000029767) Garin1b (ENSMUSG00000039742) #7 Garin1a (ENSMUSG00000079652) #8 Hilpda (ENSMUSG00000043421) Impdh1 (ENSMUSG00000003500) #9 Prrt4 (ENSMUSG00000079654) #10 Rbm28 (ENSMUSG00000029701) #11 Lep (ENSMUSG00000059201) #13 Lrrc4 (ENSMUSG00000049939) #15 Snd1 (ENSMUSG00000001424) #14 Pax4 (ENSMUSG00000029706) #16 Fscn3 (ENSMUSG00000029707) #17 Arf5 (ENSMUSG00000020440) #18 Gcc1 (ENSMUSG00000029708) #19 Zfp800 (ENSMUSG00000039841) #20 Grm8 (ENSMUSG00000024211) #22 Pot1a (ENSMUSG00000029676) #24 Gpr37 (ENSMUSG00000039904) #26 Tmem229a (ENSMUSG00000048022) Hyal5 (ENSMUSG00000029678) #27 Spam1 (ENSMUSG00000029682) #27 Hyal4 (ENSMUSG00000029680) #28 Hyal6 (ENSMUSG00000029679) ##28 Wasl (ENSMUSG00000029684) #29 Lmod2 (ENSMUSG00000029683) #30 Asb15 (ENSMUSG00000029685) #31 Ndufa5 (ENSMUSG00000023089) #32 Iqub (ENSMUSG00000046192) #34 Slc13a1 (ENSMUSG00000029700) #35 Tas2r118 (ENSMUSG00000043865) Rnf148 (ENSMUSG00000078179) #37 Ryukyu mouse MODERN SPECIES 15 Calu (MGP_CAROLIEiJ_G0028168) Garin1b (MGP_CAROLIEiJ_G0028167) #7 Garin1a (MGP_CAROLIEiJ_G0028166) #8 Hilpda (MGP_CAROLIEiJ_G0028165) Impdh1 (MGP_CAROLIEiJ_G0028164) #9 Prrt4 (MGP_CAROLIEiJ_G0028163) #10 Rbm28 (MGP_CAROLIEiJ_G0028162) #11 Lep (MGP_CAROLIEiJ_G0028161) #13 Lrrc4 (MGP_CAROLIEiJ_G0028160) #15 Snd1 (MGP_CAROLIEiJ_G0028159) #14 Pax4 (MGP_CAROLIEiJ_G0028158) #16 Fscn3 (MGP_CAROLIEiJ_G0028157) #17 Arf5 (MGP_CAROLIEiJ_G0028156) #18 Gcc1 (MGP_CAROLIEiJ_G0028155) #19 Zfp800 (MGP_CAROLIEiJ_G0028154) #20 Grm8 (MGP_CAROLIEiJ_G0028153) #22 MGP_CAROLIEiJ_G0028152 #24 Gpr37 (MGP_CAROLIEiJ_G0028151) #26 Tmem229a (MGP_CAROLIEiJ_G0028150) Hyal5 (MGP_CAROLIEiJ_G0028149) #27 Spam1 (MGP_CAROLIEiJ_G0028148) #27 Hyal4 (MGP_CAROLIEiJ_G0028147) #28 Hyal6 (MGP_CAROLIEiJ_G0028146) ##28 Wasl (MGP_CAROLIEiJ_G0028145) #29 Lmod2 (MGP_CAROLIEiJ_G0028144) #30 Asb15 (MGP_CAROLIEiJ_G0028143) #31 Ndufa5 (MGP_CAROLIEiJ_G0028142) #32 Iqub (MGP_CAROLIEiJ_G0028141) #34 Slc13a1 (MGP_CAROLIEiJ_G0028140) #35 Tas2r118 (MGP_CAROLIEiJ_G0028139) Rnf148 (MGP_CAROLIEiJ_G0028138) #37 Shrew mouse MODERN SPECIES 11 Calu (MGP_PahariEiJ_G0021926) Garin1b (MGP_PahariEiJ_G0021925) #7 Garin1a (MGP_PahariEiJ_G0021924) #8 Hilpda (MGP_PahariEiJ_G0021923) Impdh1 (MGP_PahariEiJ_G0021922) #9 Prrt4 (MGP_PahariEiJ_G0021921) #10 Rbm28 (MGP_PahariEiJ_G0021920) #11 Lep (MGP_PahariEiJ_G0021919) #13 Lrrc4 (MGP_PahariEiJ_G0021918) #15 Snd1 (MGP_PahariEiJ_G0021917) #14 Pax4 (MGP_PahariEiJ_G0021916) #16 Fscn3 (MGP_PahariEiJ_G0021915) #17 Arf5 (MGP_PahariEiJ_G0021914) #18 Gcc1 (MGP_PahariEiJ_G0021913) #19 Zfp800 (MGP_PahariEiJ_G0021912) #20 Grm8 (MGP_PahariEiJ_G0021911) #22 Pot1a (MGP_PahariEiJ_G0021910) #24 Gpr37 (MGP_PahariEiJ_G0021909) #26 MGP_PahariEiJ_G0021908 MGP_PahariEiJ_G0021907 Tmem229a (MGP_PahariEiJ_G0021906) Hyal5 (MGP_PahariEiJ_G0021905) #27 Spam1 (MGP_PahariEiJ_G0021904) #27 Hyal4 (MGP_PahariEiJ_G0021903) #28 Hyal6 (MGP_PahariEiJ_G0021902) ##28 Wasl (MGP_PahariEiJ_G0021901) #29 Lmod2 (MGP_PahariEiJ_G0021900) #30 Asb15 (MGP_PahariEiJ_G0021899) #31 Ndufa5 (MGP_PahariEiJ_G0021898) #32 Iqub (MGP_PahariEiJ_G0021897) #34 Slc13a1 (MGP_PahariEiJ_G0021896) #35 Rat MODERN SPECIES 14 Calu (ENSRNOG00000006197) Garin1b (ENSRNOG00000006132) #7 Garin1a (ENSRNOG00000039383) #8 Impdh1 (ENSRNOG00000020032) #9 Prrt4 (ENSRNOG00000039388) #10 Rbm28 (ENSRNOG00000005468) #11 Lep (ENSRNOG00000045797) #13 Lrrc4 (ENSRNOG00000008098) #15 Snd1 (ENSRNOG00000031173) #14 Pax4 (ENSRNOG00000008020) #16 Fscn3 (ENSRNOG00000007942) #17 Arf5 (ENSRNOG00000007806) Gcc1 (ENSRNOG00000007792) #19 Zfp800 (ENSRNOG00000007662) #20 ENSRNOG00000064958 Grm8 (ENSRNOG00000021468) #22 ENSRNOG00000063353 Pot1 (ENSRNOG00000019986) #24 Gpr37 (ENSRNOG00000002524) #26 Tmem229a (ENSRNOG00000069945) Hyal5 (ENSRNOG00000039466) #27 Spam1 (ENSRNOG00000007231) #27 Hyal4 (ENSRNOG00000007212) #28 Hyal6 (ENSRNOG00000021695) ##28 ENSRNOG00000067771 Wasl (ENSRNOG00000006975) #29 Lmod2 (ENSRNOG00000045831) #30 Asb15 (ENSRNOG00000006365) #31 Ndufa5 (ENSRNOG00000071062) #32 Iqub (ENSRNOG00000021729) #34 Slc13a1 (ENSRNOG00000008121) #35 Cricetidae ANCESTRAL SPECIES 3 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163928 Northern American deer mouse MODERN SPECIES 16 Slc26a5 (ENSPEMG00000024244) Reln (ENSPEMG00000021521) ENSPEMG00000015868 Orc5 (ENSPEMG00000021074) ENSPEMG00000003894 ENSPEMG00000023727 Kmt2e (ENSPEMG00000023998) Srpk2 (ENSPEMG00000023484) Pus7 (ENSPEMG00000022616) Rint1 (ENSPEMG00000000288) ENSPEMG00000027321 Adam22 (ENSPEMG00000012604) Sri (ENSPEMG00000029898) Steap4 (ENSPEMG00000016725) Tex47 (ENSPEMG00000001050) Grm8 (ENSPEMG00000023411) #22 Pot1a (ENSPEMG00000017491) #24 Gpr37 (ENSPEMG00000026365) #26 Tmem229a (ENSPEMG00000007156) Hyal5 (ENSPEMG00000018755) #27 ENSPEMG00000026037 #27 Spam1 (ENSPEMG00000000657) #27 Hyal4 (ENSPEMG00000011752) #28 Hyal6 (ENSPEMG00000019262) ##28 Wasl (ENSPEMG00000008381) #29 Lmod2 (ENSPEMG00000009160) #30 Asb15 (ENSPEMG00000019026) #31 Ndufa5 (ENSPEMG00000009370) #32 Iqub (ENSPEMG00000016127) #34 Slc13a1 (ENSPEMG00000018404) #35 Tas2r118 (ENSPEMG00000016153) Prairie vole MODERN SPECIES 87 Garin1b (ENSMOCG00000017381) #7 Garin1a (ENSMOCG00000010184) #8 Hilpda (ENSMOCG00000001096) Impdh1 (ENSMOCG00000008218) #9 Prrt4 (ENSMOCG00000020766) #10 Rbm28 (ENSMOCG00000014615) #11 Lep (ENSMOCG00000015600) #13 Lrrc4 (ENSMOCG00000005637) #15 Snd1 (ENSMOCG00000005040) #14 Pax4 (ENSMOCG00000018632) #16 Fscn3 (ENSMOCG00000005936) #17 Arf5 (ENSMOCG00000022861) #18 Gcc1 (ENSMOCG00000022632) #19 ENSMOCG00000004985 ENSMOCG00000014942 #20 Grm8 (ENSMOCG00000012255) #22 ENSMOCG00000005667 ENSMOCG00000003837 Pot1a (ENSMOCG00000013730) #24 Gpr37 (ENSMOCG00000004144) #26 ENSMOCG00000000208 ENSMOCG00000020573 ENSMOCG00000004830 Tmem229a (ENSMOCG00000005436) Hyal5 (ENSMOCG00000005616) #27 Spam1 (ENSMOCG00000019823) #27 Hyal4 (ENSMOCG00000016868) #28 Hyal6 (ENSMOCG00000011551) ##28 Wasl (ENSMOCG00000010725) #29 Lmod2 (ENSMOCG00000002701) #30 Asb15 (ENSMOCG00000020491) #31 Cricetinae ANCESTRAL SPECIES 23 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285.a #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.g #27 ENSGT01020000230364.a.a.b.a.h #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Golden Hamster MODERN SPECIES 696 Garin1a (ENSMAUG00000017274) #8 Hilpda (ENSMAUG00000007190) Impdh1 (ENSMAUG00000000330) #9 Prrt4 (ENSMAUG00000017303) #10 Rbm28 (ENSMAUG00000002263) #11 Lep (ENSMAUG00000020902) #13 ENSMAUG00000003832 ENSMAUG00000002387 Lrrc4 (ENSMAUG00000021671) #15 ENSMAUG00000010867 Pax4 (ENSMAUG00000013522) #16 Fscn3 (ENSMAUG00000016354) #17 Arf5 (ENSMAUG00000014825) #18 Gcc1 (ENSMAUG00000011450) #19 Zfp800 (ENSMAUG00000012345) #20 ENSMAUG00000003483 #22 ENSMAUG00000003050 Pot1a (ENSMAUG00000019453) #24 Gpr37 (ENSMAUG00000012922) #26 Tmem229a (ENSMAUG00000006195) Hyal5 (ENSMAUG00000009239) #27 Spam1 (ENSMAUG00000021805) #27 Hyal4 (ENSMAUG00000002046) #28 Wasl (ENSMAUG00000019789) #29 Lmod2 (ENSMAUG00000019039) #30 Asb15 (ENSMAUG00000019338) #31 ENSMAUG00000008323 #32 Iqub (ENSMAUG00000010910) #34 Slc13a1 (ENSMAUG00000021116) #35 Rnf148 (ENSMAUG00000002390) #37 Cadps2 (ENSMAUG00000014481) #36 Chinese hamster chok1gshd MODERN SPECIES 54 Calu (ENSCGRG00001002862) Garin1b (ENSCGRG00001009768) #7 Garin1a (ENSCGRG00001000260) #8 Hilpda (ENSCGRG00001012150) Impdh1 (ENSCGRG00001000560) #9 Prrt4 (ENSCGRG00001020242) #10 Rbm28 (ENSCGRG00001021278) #11 Lep (ENSCGRG00001014943) #13 Lrrc4 (ENSCGRG00001003915) #15 Snd1 (ENSCGRG00001022514) #14 Pax4 (ENSCGRG00001019051) #16 Fscn3 (ENSCGRG00001005640) #17 Arf5 (ENSCGRG00001024919) #18 Gcc1 (ENSCGRG00001022730) #19 Zfp800 (ENSCGRG00001012282) #20 Grm8 (ENSCGRG00001016554) #22 Pot1a (ENSCGRG00001024686) #24 Gpr37 (ENSCGRG00001018600) #26 Tmem229a (ENSCGRG00001012837) Hyal5 (ENSCGRG00001010241) #27 ENSCGRG00001024061 #27 Hyal4 (ENSCGRG00001021691) #28 Hyal6 (ENSCGRG00001011375) ##28 Wasl (ENSCGRG00001022194) #29 Lmod2 (ENSCGRG00001014874) #30 Asb15 (ENSCGRG00001019273) #31 Ndufa5 (ENSCGRG00001006693) #32 Iqub (ENSCGRG00001019481) #34 Slc13a1 (ENSCGRG00001009482) #35 Tas2r118 (ENSCGRG00001006107) ENSCGRG00001004003 Lagomorpha ANCESTRAL SPECIES 24 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Rabbit MODERN SPECIES 18 GARIN1B (ENSOCUG00000008160) #7 GARIN1A (ENSOCUG00000013274) #8 ENSOCUG00000013266 HILPDA (ENSOCUG00000011823) IMPDH1 (ENSOCUG00000003015) #9 RBM28 (ENSOCUG00000003009) #11 PRRT4 (ENSOCUG00000039585) #10 LEP (ENSOCUG00000010189) #13 SND1 (ENSOCUG00000001620) #14 LRRC4 (ENSOCUG00000015121) #15 PAX4 (ENSOCUG00000001612) #16 FSCN3 (ENSOCUG00000001609) #17 ARF5 (ENSOCUG00000024365) #18 GCC1 (ENSOCUG00000006344) #19 ZNF800 (ENSOCUG00000002127) #20 GRM8 (ENSOCUG00000002123) #22 ENSOCUG00000015058 ENSOCUG00000010617 #24 GPR37 (ENSOCUG00000006702) #26 ENSOCUG00000035821 SPAM1 (ENSOCUG00000011449) #27 HYAL4 (ENSOCUG00000015116) #28 ENSOCUG00000021314 ##28 ENSOCUG00000000544 WASL (ENSOCUG00000008373) #29 LMOD2 (ENSOCUG00000017131) #30 ENSOCUG00000038499 ASB15 (ENSOCUG00000017124) #31 ENSOCUG00000030143 #32 IQUB (ENSOCUG00000009553) #34 ENSOCUG00000034895 Pika MODERN SPECIES 3784 GRM8 (ENSOPRG00000015929) #22 Laurasiatheria ANCESTRAL SPECIES 21 ENSGT00940000169914 ENSGT00950000185983 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Eulipotyphla ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b #22 Hedgehog MODERN SPECIES 7281 GRM8 (ENSEEUG00000007524) #22 Common shrew MODERN SPECIES 5706 GRM8 (ENSSARG00000004910) #22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000169914 ENSGT00950000185983 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Suina ANCESTRAL SPECIES 19 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000159477 Chacoan peccary MODERN SPECIES 72 CALU (ENSCWAG00000003815) GARIN1B (ENSCWAG00000003788) #7 GARIN1A (ENSCWAG00000003763) #8 ENSCWAG00000003747 IMPDH1 (ENSCWAG00000003659) #9 PRRT4 (ENSCWAG00000003635) #10 RBM28 (ENSCWAG00000003603) #11 LEP (ENSCWAG00000003589) #13 LRRC4 (ENSCWAG00000003577) #15 SND1 (ENSCWAG00000003558) #14 PAX4 (ENSCWAG00000003505) #16 FSCN3 (ENSCWAG00000003487) #17 ARF5 (ENSCWAG00000003480) #18 GCC1 (ENSCWAG00000003474) #19 ZNF800 (ENSCWAG00000003466) #20 GRM8 (ENSCWAG00000003445) #22 POT1 (ENSCWAG00000003417) #24 GPR37 (ENSCWAG00000003404) #26 TMEM229A (ENSCWAG00000003399) SPAM1 (ENSCWAG00000003392) #27 HYAL4 (ENSCWAG00000003380) #28 ENSCWAG00000003365 ##28 ENSCWAG00000003358 WASL (ENSCWAG00000003340) #29 LMOD2 (ENSCWAG00000003324) #30 ASB15 (ENSCWAG00000003309) #31 NDUFA5 (ENSCWAG00000003275) #32 IQUB (ENSCWAG00000003237) #34 SLC13A1 (ENSCWAG00000003215) #35 TAS2R16 (ENSCWAG00000003208) CADPS2 (ENSCWAG00000002856) #36 Pig MODERN SPECIES 9 GARIN1B (ENSSSCG00000016582) #7 GARIN1A (ENSSSCG00000016583) #8 HILPDA (ENSSSCG00000031109) IMPDH1 (ENSSSCG00000016585) #9 ENSSSCG00000048237 PRRT4 (ENSSSCG00000037087) #10 RBM28 (ENSSSCG00000031847) #11 LEP (ENSSSCG00000040464) #13 SND1 (ENSSSCG00000016590) #14 LRRC4 (ENSSSCG00000016589) #15 PAX4 (ENSSSCG00000016591) #16 FSCN3 (ENSSSCG00000016592) #17 ARF5 (ENSSSCG00000016593) #18 GCC1 (ENSSSCG00000035211) #19 ZNF800 (ENSSSCG00000024157) #20 GRM8 (ENSSSCG00000022865) #22 ENSSSCG00000060532 ENSSSCG00000034587 POT1 (ENSSSCG00000016597) #24 GPR37 (ENSSSCG00000016599) #26 TMEM229A (ENSSSCG00000016600) SPAM1 (ENSSSCG00000016601) #27 HYAL4 (ENSSSCG00000016603) #28 WASL (ENSSSCG00000016604) #29 LMOD2 (ENSSSCG00000016605) #30 ASB15 (ENSSSCG00000016606) #31 NDUFA5 (ENSSSCG00000037869) #32 IQUB (ENSSSCG00000016608) #34 SLC13A1 (ENSSSCG00000016609) #35 ENSSSCG00000035710 TAS2R16 (ENSSSCG00000037368) Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Cetacea ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153305.d.w ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.hb.b #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Odontoceti ANCESTRAL SPECIES 12 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153305.d.w ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.hb.b #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153305.d.w ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.hb.b #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000158491.d ENSGT00390000011958.j ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153305.d.w ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.hb.b #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000162417.B ENSGT00590000083094.a.b #36 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00940000158491.d ENSGT00390000011958.j ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153305.d.w ENSGT01090000260175.k ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.hb.b #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000162417.B Beluga whale MODERN SPECIES 72 GARIN1A (ENSDLEG00000012559) #8 HILPDA (ENSDLEG00000012580) ENSDLEG00000012587 #9 PRRT4 (ENSDLEG00000012610) #10 ENSDLEG00000012621 RBM28 (ENSDLEG00000012635) #11 Ob (ENSDLEG00000012664) #13 SND1 (ENSDLEG00000012684) #14 LRRC4 (ENSDLEG00000012769) #15 ENSDLEG00000012774 ENSDLEG00000012789 FSCN3 (ENSDLEG00000012802) #17 ARF5 (ENSDLEG00000012847) #18 GCC1 (ENSDLEG00000012860) #19 ZNF800 (ENSDLEG00000012873) #20 GRM8 (ENSDLEG00000012885) #22 ENSDLEG00000012896 ENSDLEG00000012914 POT1 (ENSDLEG00000012924) #24 GPR37 (ENSDLEG00000012949) #26 ENSDLEG00000012964 TMEM229A (ENSDLEG00000012972) SPAM1 (ENSDLEG00000012980) #27 HYAL4 (ENSDLEG00000012997) #28 WASL (ENSDLEG00000013023) #29 ENSDLEG00000013076 #30 ASB15 (ENSDLEG00000013080) #31 NDUFA5 (ENSDLEG00000013110) #32 IQUB (ENSDLEG00000013127) #34 ENSDLEG00000013176 SLC13A1 (ENSDLEG00000013207) #35 Narwhal MODERN SPECIES 306 HILPDA (ENSMMNG00015005632) ENSMMNG00015005468 #9 PRRT4 (ENSMMNG00015005396) #10 RBM28 (ENSMMNG00015005356) #11 LEP (ENSMMNG00015005324) #13 LRRC4 (ENSMMNG00015005311) #15 ENSMMNG00015005287 SND1 (ENSMMNG00015005249) #14 ENSMMNG00015005220 PAX4 (ENSMMNG00015005191) #16 FSCN3 (ENSMMNG00015009527) #17 ARF5 (ENSMMNG00015009511) #18 GCC1 (ENSMMNG00015009503) #19 ZNF800 (ENSMMNG00015009479) #20 ENSMMNG00015009463 GRM8 (ENSMMNG00015009439) #22 ENSMMNG00015009422 POT1 (ENSMMNG00015009406) #24 GPR37 (ENSMMNG00015009398) #26 TMEM229A (ENSMMNG00015009387) SPAM1 (ENSMMNG00015009281) #27 HYAL4 (ENSMMNG00015009237) #28 WASL (ENSMMNG00015009205) #29 ENSMMNG00015009197 LMOD2 (ENSMMNG00015009190) #30 ASB15 (ENSMMNG00015009175) #31 ENSMMNG00015009163 #32 IQUB (ENSMMNG00015009140) #34 SLC13A1 (ENSMMNG00015009128) #35 ENSMMNG00015009100 CADPS2 (ENSMMNG00015009046) #36 Vaquita MODERN SPECIES 20 CALU (ENSPSNG00000018358) GARIN1B (ENSPSNG00000018506) #7 GARIN1A (ENSPSNG00000018600) #8 ENSPSNG00000018846 #9 PRRT4 (ENSPSNG00000019177) #10 RBM28 (ENSPSNG00000019283) #11 LEP (ENSPSNG00000019352) #13 SND1 (ENSPSNG00000019438) #14 LRRC4 (ENSPSNG00000019500) #15 ENSPSNG00000019518 PAX4 (ENSPSNG00000019551) #16 FSCN3 (ENSPSNG00000019633) #17 ARF5 (ENSPSNG00000019685) #18 GCC1 (ENSPSNG00000019719) #19 ZNF800 (ENSPSNG00000019763) #20 GRM8 (ENSPSNG00000019805) #22 ENSPSNG00000019931 POT1 (ENSPSNG00000019996) #24 GPR37 (ENSPSNG00000020031) #26 TMEM229A (ENSPSNG00000020055) SPAM1 (ENSPSNG00000020149) #27 HYAL4 (ENSPSNG00000020388) #28 WASL (ENSPSNG00000020424) #29 LMOD2 (ENSPSNG00000020477) #30 ASB15 (ENSPSNG00000020518) #31 ENSPSNG00000020559 #32 SLC13A1 (ENSPSNG00000020626) #35 IQUB (ENSPSNG00000020805) #34 ENSPSNG00000020858 ENSPSNG00000004162 CADPS2 (ENSPSNG00000004337) #36 Dolphin MODERN SPECIES 2183 ZNF800 (ENSTTRG00000002541) #20 GRM8 (ENSTTRG00000002537) #22 Sperm whale MODERN SPECIES 16 TNPO3 (ENSPCTG00005001428) ENSPCTG00005001560 OPN1SW (ENSPCTG00005001574) CALU (ENSPCTG00005001613) GARIN1B (ENSPCTG00005001671) #7 GARIN1A (ENSPCTG00005001694) #8 HILPDA (ENSPCTG00005001716) IMPDH1 (ENSPCTG00005001748) #9 PRRT4 (ENSPCTG00005001828) #10 RBM28 (ENSPCTG00005001842) #11 ENSPCTG00005001867 LEP (ENSPCTG00005001874) #13 SND1 (ENSPCTG00005001983) #14 ENSPCTG00005002338 ZNF800 (ENSPCTG00005002350) #20 GRM8 (ENSPCTG00005002369) #22 ENSPCTG00005002397 ENSPCTG00005002405 POT1 (ENSPCTG00005002426) #24 GPR37 (ENSPCTG00005002453) #26 TMEM229A (ENSPCTG00005002465) SPAM1 (ENSPCTG00005002472) #27 HYAL4 (ENSPCTG00005002485) #28 WASL (ENSPCTG00005002510) #29 ENSPCTG00005002563 #30 ASB15 (ENSPCTG00005002574) #31 NDUFA5 (ENSPCTG00005002601) #32 IQUB (ENSPCTG00005002620) #34 ENSPCTG00005002648 SLC13A1 (ENSPCTG00005002663) #35 CADPS2 (ENSPCTG00005002800) #36 Blue whale MODERN SPECIES 20 GARIN1B (ENSBMSG00010005451) #7 GARIN1A (ENSBMSG00010005458) #8 IMPDH1 (ENSBMSG00010005499) #9 PRRT4 (ENSBMSG00010005567) #10 ENSBMSG00010005580 RBM28 (ENSBMSG00010005595) #11 LEP (ENSBMSG00010005621) #13 SND1 (ENSBMSG00010005644) #14 ENSBMSG00010005674 ENSBMSG00010005681 PAX4 (ENSBMSG00010005697) #16 FSCN3 (ENSBMSG00010005721) #17 ARF5 (ENSBMSG00010005732) #18 GCC1 (ENSBMSG00010005744) #19 ZNF800 (ENSBMSG00010005758) #20 GRM8 (ENSBMSG00010005780) #22 ENSBMSG00010005805 POT1 (ENSBMSG00010005826) #24 GPR37 (ENSBMSG00010005843) #26 TMEM229A (ENSBMSG00010005860) SPAM1 (ENSBMSG00010005920) #27 HYAL4 (ENSBMSG00010006079) #28 WASL (ENSBMSG00010006101) #29 ENSBMSG00010006117 #30 ASB15 (ENSBMSG00010006126) #31 NDUFA5 (ENSBMSG00010006141) #32 IQUB (ENSBMSG00010006156) #34 ENSBMSG00010006184 SLC13A1 (ENSBMSG00010006206) #35 TAS2R16 (ENSBMSG00010006234) ENSBMSG00010006242 Pecora ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Percora_a ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Bovidae ANCESTRAL SPECIES 12 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Bovinae ANCESTRAL SPECIES 8 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Bos ANCESTRAL SPECIES 8 ENSGT00940000161477 #7 ENSGT00940000162027.b #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 Bos_a ANCESTRAL SPECIES 12 ENSGT00940000161477 #7 ENSGT00940000162027.b #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b Wild yak MODERN SPECIES 157 ZNF800 (ENSBMUG00000000215) #20 GRM8 (ENSBMUG00000000238) #22 Domestic yak MODERN SPECIES 23 ENSBGRG00000022771 #8 ENSBGRG00000022817 #8 ENSBGRG00000022825 IMPDH1 (ENSBGRG00000022841) #9 ENSBGRG00000023028 PRRT4 (ENSBGRG00000023047) #10 RBM28 (ENSBGRG00000023073) #11 LEP (ENSBGRG00000023249) #13 SND1 (ENSBGRG00000023300) #14 LRRC4 (ENSBGRG00000023653) #15 PAX4 (ENSBGRG00000023672) #16 FSCN3 (ENSBGRG00000023843) #17 ARF5 (ENSBGRG00000023869) #18 GCC1 (ENSBGRG00000023955) #19 ZNF800 (ENSBGRG00000023997) #20 GRM8 (ENSBGRG00000024091) #22 POT1 (ENSBGRG00000024146) #24 GPR37 (ENSBGRG00000024165) #26 TMEM229A (ENSBGRG00000024187) ENSBGRG00000024255 #27 ENSBGRG00000024538 #27 HYAL4 (ENSBGRG00000024567) #28 ENSBGRG00000024591 WASL (ENSBGRG00000024616) #29 ENSBGRG00000024664 LMOD2 (ENSBGRG00000024670) #30 ASB15 (ENSBGRG00000024698) #31 ENSBGRG00000024768 #32 IQUB (ENSBGRG00000024831) #34 ENSBGRG00000024901 ENSBGRG00000024906 Bos_b ANCESTRAL SPECIES 7 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027.b #8 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00390000010045.l ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.nb #32 ENSGT00390000014326 #34 ENSGT00990000210481 Cow MODERN SPECIES 23 CALU (ENSBTAG00000016481) GARIN1B (ENSBTAG00000009867) #7 GARIN1A (ENSBTAG00000024291) #8 IMPDH1 (ENSBTAG00000000296) #9 ENSBTAG00000031866 PRRT4 (ENSBTAG00000047482) #10 RBM28 (ENSBTAG00000017001) #11 LEP (ENSBTAG00000014911) #13 LRRC4 (ENSBTAG00000010704) #15 SND1 (ENSBTAG00000010692) #14 PAX4 (ENSBTAG00000000410) #16 FSCN3 (ENSBTAG00000009365) #17 ARF5 (ENSBTAG00000009366) #18 GCC1 (ENSBTAG00000003102) #19 ZNF800 (ENSBTAG00000020004) #20 GRM8 (ENSBTAG00000054974) #22 POT1 (ENSBTAG00000013180) #24 GPR37 (ENSBTAG00000013732) #26 TMEM229A (ENSBTAG00000049382) ENSBTAG00000022880 ENSBTAG00000031958 #27 ENSBTAG00000040349 ##28 SPAM1 (ENSBTAG00000004640) #27 HYAL4 (ENSBTAG00000005548) #28 ENSBTAG00000054421 WASL (ENSBTAG00000004643) #29 LMOD2 (ENSBTAG00000002157) #30 ASB15 (ENSBTAG00000002151) #31 NDUFA5 (ENSBTAG00000009334) #32 IQUB (ENSBTAG00000004405) #34 SLC13A1 (ENSBTAG00000006674) #35 Hybrid Bos Indicus MODERN SPECIES 23 OPN1SW (ENSBIXG00005023745) GARIN1A (ENSBIXG00005006904) #8 ENSBIXG00005004057 IMPDH1 (ENSBIXG00005023654) #9 ENSBIXG00005004012 PRRT4 (ENSBIXG00005023455) #10 RBM28 (ENSBIXG00005023387) #11 LEP (ENSBIXG00005003976) #13 SND1 (ENSBIXG00005023220) #14 LRRC4 (ENSBIXG00005023138) #15 PAX4 (ENSBIXG00005007616) #16 FSCN3 (ENSBIXG00005003929) #17 ARF5 (ENSBIXG00005023029) #18 GCC1 (ENSBIXG00005022996) #19 ZNF800 (ENSBIXG00005022911) #20 GRM8 (ENSBIXG00005022834) #22 ENSBIXG00005022813 POT1 (ENSBIXG00005022780) #24 GPR37 (ENSBIXG00005006467) #26 TMEM229A (ENSBIXG00005006667) ENSBIXG00005003882 ENSBIXG00005007168 #27 ENSBIXG00005022475 ##28 ENSBIXG00005022355 #27 HYAL4 (ENSBIXG00005022327) #28 ENSBIXG00005022311 WASL (ENSBIXG00005022282) #29 LMOD2 (ENSBIXG00005022196) #30 ASB15 (ENSBIXG00005022162) #31 ENSBIXG00005003748 #32 IQUB (ENSBIXG00005003742) #34 American bison MODERN SPECIES 3374 CALU (ENSBBBG00000002950) GARIN1B (ENSBBBG00000013746) #7 GARIN1A (ENSBBBG00000013741) #8 ENSBBBG00000002928 IMPDH1 (ENSBBBG00000002924) #9 PRRT4 (ENSBBBG00000013673) #10 RBM28 (ENSBBBG00000002849) #11 LEP (ENSBBBG00000002840) #13 SND1 (ENSBBBG00000013628) #14 LRRC4 (ENSBBBG00000013605) #15 PAX4 (ENSBBBG00000002828) #16 FSCN3 (ENSBBBG00000013578) #17 ARF5 (ENSBBBG00000002812) #18 GCC1 (ENSBBBG00000013561) #19 ZNF800 (ENSBBBG00000002809) #20 GRM8 (ENSBBBG00000013537) #22 ENSBBBG00000013518 ENSBBBG00000013507 POT1 (ENSBBBG00000013500) #24 GPR37 (ENSBBBG00000013476) #26 ENSBBBG00000013468 ENSBBBG00000013450 #27 ENSBBBG00000002735 ##28 ENSBBBG00000013359 #27 HYAL4 (ENSBBBG00000013347) #28 WASL (ENSBBBG00000013335) #29 LMOD2 (ENSBBBG00000002713) #30 ASB15 (ENSBBBG00000001610) #31 NDUFA5 (ENSBBBG00000013288) #32 IQUB (ENSBBBG00000013275) #34 SLC13A1 (ENSBBBG00000013258) #35 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.c #27 ENSGT01020000230364.a.b ##28 ENSGT01020000230364.a.a.b.a.d #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 Rambouillet Sheep MODERN SPECIES 20 CALU (ENSOARG00020005456) GARIN1B (ENSOARG00020005402) #7 FAM71F2 (ENSOARG00020005377) #8 HILPDA (ENSOARG00020005363) IMPDH1 (ENSOARG00020005183) #9 PRRT4 (ENSOARG00020005155) #10 RBM28 (ENSOARG00020005071) #11 ob (ENSOARG00020005038) #13 LRRC4 (ENSOARG00020005020) #15 ENSOARG00020004980 #14 PAX4 (ENSOARG00020004842) #16 FSCN3 (ENSOARG00020004792) #17 ARF5 (ENSOARG00020004762) #18 GCC1 (ENSOARG00020004708) #19 ZNF800 (ENSOARG00020004613) #20 GRM8 (ENSOARG00020004541) #22 ENSOARG00020004512 POT1 (ENSOARG00020004263) #24 GPR37 (ENSOARG00020004225) #26 TMEM229A (ENSOARG00020004187) ENSOARG00020004099 ##28 SPAM1 (ENSOARG00020004042) #27 HYAL4 (ENSOARG00020004017) #28 WASL (ENSOARG00020003974) #29 LMOD2 (ENSOARG00020003951) #30 ASB15 (ENSOARG00020003915) #31 ENSOARG00020003833 #32 ENSOARG00020003808 SLC13A1 (ENSOARG00020003399) #35 TAS2R16 (ENSOARG00020003346) ENSOARG00020003299 #37 Siberian musk deer MODERN SPECIES 84 GARIN1B (ENSMMSG00000020348) #7 GARIN1A (ENSMMSG00000020388) #8 HILPDA (ENSMMSG00000020415) ENSMMSG00000020426 IMPDH1 (ENSMMSG00000020466) #9 PRRT4 (ENSMMSG00000020652) #10 RBM28 (ENSMMSG00000020692) #11 LEP (ENSMMSG00000020786) #13 SND1 (ENSMMSG00000020818) #14 LRRC4 (ENSMMSG00000020883) #15 PAX4 (ENSMMSG00000020894) #16 FSCN3 (ENSMMSG00000020993) #17 ARF5 (ENSMMSG00000021026) #18 GCC1 (ENSMMSG00000021049) #19 ZNF800 (ENSMMSG00000021075) #20 GRM8 (ENSMMSG00000021112) #22 ENSMMSG00000021196 POT1 (ENSMMSG00000021223) #24 Yarkand deer MODERN SPECIES 9 ENSCHYG00000015886 IMPDH1 (ENSCHYG00000015595) #9 ENSCHYG00000015549 ENSCHYG00000015520 RBM28 (ENSCHYG00000015085) #11 LEP (ENSCHYG00000014999) #13 ENSCHYG00000014949 LRRC4 (ENSCHYG00000014918) #15 SND1 (ENSCHYG00000014315) #14 PAX4 (ENSCHYG00000014112) #16 FSCN3 (ENSCHYG00000013994) #17 ARF5 (ENSCHYG00000013895) #18 GCC1 (ENSCHYG00000013864) #19 ENSCHYG00000013833 ZNF800 (ENSCHYG00000013697) #20 GRM8 (ENSCHYG00000013536) #22 POT1 (ENSCHYG00000026987) #24 GPR37 (ENSCHYG00000026982) #26 TMEM229A (ENSCHYG00000026977) ENSCHYG00000026962 #27 ENSCHYG00000026956 #27 HYAL4 (ENSCHYG00000026955) #28 LMOD2 (ENSCHYG00000026950) #30 WASL (ENSCHYG00000026946) #29 ASB15 (ENSCHYG00000026941) #31 ENSCHYG00000026937 #32 IQUB (ENSCHYG00000026931) #34 SLC13A1 (ENSCHYG00000026920) #35 TAS2R16 (ENSCHYG00000026914) ENSCHYG00000026909 CADPS2 (ENSCHYG00000026611) #36 Camelidae ANCESTRAL SPECIES 2 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00940000154156.d #9 ENSGT00530000064743 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00990000210481 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Arabian camel MODERN SPECIES 33 GARIN1A (ENSCDRG00005006296) #8 ENSCDRG00005006285 IMPDH1 (ENSCDRG00005006025) #9 ENSCDRG00005005987 PRRT4 (ENSCDRG00005005971) #10 RBM28 (ENSCDRG00005005861) #11 LEP (ENSCDRG00005005841) #13 LRRC4 (ENSCDRG00005005827) #15 ENSCDRG00005005816 SND1 (ENSCDRG00005005782) #14 PAX4 (ENSCDRG00005005680) #16 FSCN3 (ENSCDRG00005005640) #17 ARF5 (ENSCDRG00005005607) #18 GCC1 (ENSCDRG00005005599) #19 ZNF800 (ENSCDRG00005005568) #20 GRM8 (ENSCDRG00005005517) #22 POT1 (ENSCDRG00005005463) #24 GPR37 (ENSCDRG00005005438) #26 TMEM229A (ENSCDRG00005005414) SPAM1 (ENSCDRG00005005391) #27 HYAL4 (ENSCDRG00005005339) #28 ENSCDRG00005005196 ##28 ENSCDRG00005005100 #29 LMOD2 (ENSCDRG00005005071) #30 ASB15 (ENSCDRG00005005043) #31 NDUFA5 (ENSCDRG00005005014) #32 IQUB (ENSCDRG00005004987) #34 ENSCDRG00005004974 SLC13A1 (ENSCDRG00005004922) #35 CADPS2 (ENSCDRG00005004422) #36 FEZF1 (ENSCDRG00005004315) Alpaca MODERN SPECIES 2264 RBM28 (ENSVPAG00000008304) #11 SND1 (ENSVPAG00000008302) #14 PAX4 (ENSVPAG00000008301) #16 ENSVPAG00000008300 #19 ZNF800 (ENSVPAG00000008299) #20 GRM8 (ENSVPAG00000008298) #22 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00950000185983 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00940000163382 #37 ENSGT00940000163928 Carnivora ANCESTRAL SPECIES 15 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 ENSGT00940000163928 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 ENSGT00940000163928 Caniformia_b ANCESTRAL SPECIES 9 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ursidae ANCESTRAL SPECIES 12 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.h #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ursus ANCESTRAL SPECIES 82 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.h #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C Polar bear MODERN SPECIES 281 CCDC136 (ENSUMAG00000006415) OPN1SW (ENSUMAG00000006346) CALU (ENSUMAG00000006337) GARIN1B (ENSUMAG00000006332) #7 GARIN1A (ENSUMAG00000006328) #8 IMPDH1 (ENSUMAG00000006045) #9 RBM28 (ENSUMAG00000005997) #11 LEP (ENSUMAG00000005993) #13 LRRC4 (ENSUMAG00000005972) #15 SND1 (ENSUMAG00000005960) #14 ENSUMAG00000005899 #16 FSCN3 (ENSUMAG00000005891) #17 ENSUMAG00000005886 #18 ENSUMAG00000005879 #19 ZNF800 (ENSUMAG00000005877) #20 GRM8 (ENSUMAG00000005860) #22 POT1 (ENSUMAG00000005740) #24 GPR37 (ENSUMAG00000005723) #26 SPAM1 (ENSUMAG00000005678) #27 HYAL4 (ENSUMAG00000005668) #28 ENSUMAG00000005628 ##28 WASL (ENSUMAG00000005599) #29 LMOD2 (ENSUMAG00000005592) #30 ASB15 (ENSUMAG00000005569) #31 ENSUMAG00000005561 #32 IQUB (ENSUMAG00000005549) #34 ENSUMAG00000005539 #35 CADPS2 (ENSUMAG00000004849) #36 FEZF1 (ENSUMAG00000004731) AASS (ENSUMAG00000003535) PTPRZ1 (ENSUMAG00000003260) Giant Panda MODERN SPECIES OPN1SW (ENSAMEG00000004922) CALU (ENSAMEG00000004885) GARIN1B (ENSAMEG00000004877) #7 GARIN1A (ENSAMEG00000004872) #8 ENSAMEG00000004871 IMPDH1 (ENSAMEG00000004824) #9 RBM28 (ENSAMEG00000004776) #11 LEP (ENSAMEG00000027137) #13 LRRC4 (ENSAMEG00000019025) #15 SND1 (ENSAMEG00000004664) #14 PAX4 (ENSAMEG00000004648) #16 FSCN3 (ENSAMEG00000004642) #17 ARF5 (ENSAMEG00000004635) #18 GCC1 (ENSAMEG00000004631) #19 ZNF800 (ENSAMEG00000004627) #20 GRM8 (ENSAMEG00000004617) #22 POT1 (ENSAMEG00000015057) #24 GPR37 (ENSAMEG00000015050) #26 TMEM229A (ENSAMEG00000028267) SPAM1 (ENSAMEG00000004578) #27 HYAL4 (ENSAMEG00000004577) #28 ENSAMEG00000004569 ##28 WASL (ENSAMEG00000004549) #29 ENSAMEG00000023643 #30 ASB15 (ENSAMEG00000004517) #31 NDUFA5 (ENSAMEG00000004512) #32 IQUB (ENSAMEG00000004491) #34 SLC13A1 (ENSAMEG00000004466) #35 CADPS2 (ENSAMEG00000004390) #36 FEZF1 (ENSAMEG00000004386) AASS (ENSAMEG00000004321) Mustelinae ANCESTRAL SPECIES 9 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ferret MODERN SPECIES 168 GARIN1A (ENSMPUG00000006446) #8 ENSMPUG00000006475 IMPDH1 (ENSMPUG00000006480) #9 ENSMPUG00000006497 ENSMPUG00000006503 #10 RBM28 (ENSMPUG00000006511) #11 LEP (ENSMPUG00000006529) #13 ENSMPUG00000006536 SND1 (ENSMPUG00000006545) #14 LRRC4 (ENSMPUG00000006565) #15 PAX4 (ENSMPUG00000006575) #16 FSCN3 (ENSMPUG00000006639) #17 ARF5 (ENSMPUG00000006675) #18 GCC1 (ENSMPUG00000006725) #19 ZNF800 (ENSMPUG00000006731) #20 GRM8 (ENSMPUG00000006740) #22 POT1 (ENSMPUG00000006753) #24 GPR37 (ENSMPUG00000006761) #26 TMEM229A (ENSMPUG00000018743) SPAM1 (ENSMPUG00000006764) #27 HYAL4 (ENSMPUG00000006771) #28 ENSMPUG00000006776 ##28 WASL (ENSMPUG00000006781) #29 LMOD2 (ENSMPUG00000006791) #30 ASB15 (ENSMPUG00000006795) #31 ENSMPUG00000006805 NDUFA5 (ENSMPUG00000006811) #32 IQUB (ENSMPUG00000006817) #34 SLC13A1 (ENSMPUG00000006826) #35 CADPS2 (ENSMPUG00000006834) #36 FEZF1 (ENSMPUG00000006851) American mink MODERN SPECIES 3 CALU (ENSNVIG00000000059) GARIN1B (ENSNVIG00000000204) #7 GARIN1A (ENSNVIG00000000229) #8 ENSNVIG00000000238 IMPDH1 (ENSNVIG00000000252) #9 PRRT4 (ENSNVIG00000000314) #10 RBM28 (ENSNVIG00000000320) #11 LEP (ENSNVIG00000000369) #13 E7ESM6 (ENSNVIG00000000397) #14 LRRC4 (ENSNVIG00000000448) #15 PAX4 (ENSNVIG00000000457) #16 FSCN3 (ENSNVIG00000000474) #17 ARF5 (ENSNVIG00000000489) #18 GCC1 (ENSNVIG00000000492) #19 ZNF800 (ENSNVIG00000000502) #20 GRM8 (ENSNVIG00000000535) #22 ENSNVIG00000000555 ENSNVIG00000000564 POT1 (ENSNVIG00000000588) #24 GPR37 (ENSNVIG00000000687) #26 TMEM229A (ENSNVIG00000000699) SPAM1 (ENSNVIG00000000705) #27 HYAL4 (ENSNVIG00000000849) #28 ENSNVIG00000000869 ##28 WASL (ENSNVIG00000001022) #29 LMOD2 (ENSNVIG00000001035) #30 ASB15 (ENSNVIG00000001045) #31 NDUFA5 (ENSNVIG00000001143) #32 IQUB (ENSNVIG00000001202) #34 SLC13A1 (ENSNVIG00000001237) #35 CADPS2 (ENSNVIG00000001278) #36 Canidae ANCESTRAL SPECIES 22 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00940000167126 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00540000070023.c.a.a.o.b ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01050000244818.t.c.a.b.a.b.a.a ENSGT00940000163685 ENSGT00940000153395.a ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.`b.a #32 ENSGT00390000008815.g.a Canis_lupus ANCESTRAL SPECIES 24 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00940000167126 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153165.a.a.d.e.b.a.a.a.c.b ENSGT00540000070023.c.a.a.o.b ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.`b.a #32 ENSGT00390000008815.g.a ENSGT00940000162678.d.p.b ENSGT01030000234595.B.c.b Dingo MODERN SPECIES 203 GARIN1A (ENSCAFG00020021653) #8 ENSCAFG00020021652 ENSCAFG00020021651 IMPDH1 (ENSCAFG00020021650) #9 PRRT4 (ENSCAFG00020021649) #10 RBM28 (ENSCAFG00020021648) #11 LEP (ENSCAFG00020021646) #13 LRRC4 (ENSCAFG00020021644) #15 ENSCAFG00020021642 SND1 (ENSCAFG00020021639) #14 PAX4 (ENSCAFG00020021633) #16 FSCN3 (ENSCAFG00020021630) #17 ARF5 (ENSCAFG00020021629) #18 GCC1 (ENSCAFG00020021628) #19 ZNF800 (ENSCAFG00020021627) #20 GRM8 (ENSCAFG00020021620) #22 ENSCAFG00020021614 ENSCAFG00020021604 ENSCAFG00020021600 ENSCAFG00020021596 POT1 (ENSCAFG00020021591) #24 GPR37 (ENSCAFG00020021590) #26 ENSCAFG00020021584 ENSCAFG00020021583 TMEM229A (ENSCAFG00020021578) SPAM1 (ENSCAFG00020021576) #27 HYAL4 (ENSCAFG00020021572) #28 ENSCAFG00020021567 ##28 WASL (ENSCAFG00020021561) #29 ENSCAFG00020021560 #30 ASB15 (ENSCAFG00020021559) #31 Dog MODERN SPECIES 5 FAM71F1 (ENSCAFG00845023982) #7 GARIN1A (ENSCAFG00845024028) #8 ENSCAFG00845024069 IMPDH (ENSCAFG00845024195) #9 PRRT4 (ENSCAFG00845024597) #10 RBM28 (ENSCAFG00845024695) #11 LEP (ENSCAFG00845025165) #13 SND1 (ENSCAFG00845025303) #14 LRRC4 (ENSCAFG00845025632) #15 ENSCAFG00845025672 PAX4 (ENSCAFG00845025704) #16 FSCN3 (ENSCAFG00845025795) #17 ARF5 (ENSCAFG00845025859) #18 GCC1 (ENSCAFG00845025919) #19 ZNF800 (ENSCAFG00845025995) #20 GRM8 (ENSCAFG00845026262) #22 ENSCAFG00845005570 ENSCAFG00845005603 ENSCAFG00845005618 POT1 (ENSCAFG00845005675) #24 GPR37 (ENSCAFG00845005725) #26 LSM3 (ENSCAFG00845005837) SPAM1 (ENSCAFG00845005894) #27 HYAL4 (ENSCAFG00845005913) #28 ENSCAFG00845005941 ##28 WASL (ENSCAFG00845006059) #29 LMOD2 (ENSCAFG00845006144) #30 ENSCAFG00845006215 #31 ENSCAFG00845006320 #32 ENSCAFG00845006354 ENSCAFG00845006413 Red fox MODERN SPECIES 83 GARIN1B (ENSVVUG00000010383) #7 GARIN1A (ENSVVUG00000010379) #8 ENSVVUG00000010373 ENSVVUG00000010368 IMPDH1 (ENSVVUG00000007352) #9 RBM28 (ENSVVUG00000007270) #11 LEP (ENSVVUG00000007265) #13 LRRC4 (ENSVVUG00000007250) #15 ENSVVUG00000007246 SND1 (ENSVVUG00000007226) #14 PAX4 (ENSVVUG00000007146) #16 FSCN3 (ENSVVUG00000007136) #17 ARF5 (ENSVVUG00000007062) #18 GCC1 (ENSVVUG00000007055) #19 ZNF800 (ENSVVUG00000007040) #20 GRM8 (ENSVVUG00000007005) #22 ENSVVUG00000006976 ENSVVUG00000006973 ENSVVUG00000006967 ENSVVUG00000006965 POT1 (ENSVVUG00000006943) #24 GPR37 (ENSVVUG00000006939) #26 ENSVVUG00000006932 ENSVVUG00000006912 Felidae ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.gb.a #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Panthera ANCESTRAL SPECIES 1 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.gb.a #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Tiger MODERN SPECIES 312 LRRC4 (ENSPTIG00000007929) #15 SND1 (ENSPTIG00000014214) #14 PAX4 (ENSPTIG00000014188) #16 FSCN3 (ENSPTIG00000014180) #17 ARF5 (ENSPTIG00000014139) #18 GCC1 (ENSPTIG00000014129) #19 ZNF800 (ENSPTIG00000014113) #20 GRM8 (ENSPTIG00000013762) #22 Panthera_a ANCESTRAL SPECIES ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914.a ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.gb.a #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00590000083094.a.b #36 ENSGT00940000159477 leopard MODERN SPECIES 23 OPN1SW (ENSPPRG00000002803) CALU (ENSPPRG00000002880) GARIN1B (ENSPPRG00000003211) #7 GARIN1A (ENSPPRG00000003232) #8 IMPDH1 (ENSPPRG00000004153) #9 PRRT4 (ENSPPRG00000004214) #10 RBM28 (ENSPPRG00000004420) #11 LEP (ENSPPRG00000004465) #13 LRRC4 (ENSPPRG00000004476) #15 SND1 (ENSPPRG00000004494) #14 PAX4 (ENSPPRG00000004640) #16 FSCN3 (ENSPPRG00000004664) #17 ARF5 (ENSPPRG00000004674) #18 GCC1 (ENSPPRG00000004679) #19 ZNF800 (ENSPPRG00000004753) #20 GRM8 (ENSPPRG00000004848) #22 POT1 (ENSPPRG00000005418) #24 GPR37 (ENSPPRG00000005429) #26 TMEM229A (ENSPPRG00000019816) SPAM1 (ENSPPRG00000005615) #27 HYAL4 (ENSPPRG00000005672) #28 ENSPPRG00000005738 ##28 WASL (ENSPPRG00000005769) #29 LMOD2 (ENSPPRG00000005815) #30 ASB15 (ENSPPRG00000005862) #31 ENSPPRG00000006159 #32 IQUB (ENSPPRG00000006201) #34 SLC13A1 (ENSPPRG00000006256) #35 ENSPPRG00000006309 #37 CADPS2 (ENSPPRG00000006851) #36 FEZF1 (ENSPPRG00000006922) lion MODERN SPECIES 2 CALU (ENSPLOG00000012712) GARIN1B (ENSPLOG00000012642) #7 GARIN1A (ENSPLOG00000012554) #8 ENSPLOG00000012531 IMPDH1 (ENSPLOG00000012239) #9 PRRT4 (ENSPLOG00000012122) #10 RBM28 (ENSPLOG00000012090) #11 LEP (ENSPLOG00000012046) #13 LRRC4 (ENSPLOG00000012023) #15 SND1 (ENSPLOG00000011908) #14 PAX4 (ENSPLOG00000011588) #16 FSCN3 (ENSPLOG00000011529) #17 ARF5 (ENSPLOG00000011492) #18 GCC1 (ENSPLOG00000011454) #19 ZNF800 (ENSPLOG00000011404) #20 GRM8 (ENSPLOG00000011236) #22 POT1 (ENSPLOG00000011074) #24 GPR37 (ENSPLOG00000006731) #26 TMEM229A (ENSPLOG00000006721) SPAM1 (ENSPLOG00000006697) #27 HYAL4 (ENSPLOG00000006677) #28 ENSPLOG00000006559 ##28 WASL (ENSPLOG00000006519) #29 ENSPLOG00000006488 #30 ASB15 (ENSPLOG00000006438) #31 NDUFA5 (ENSPLOG00000006357) #32 ENSPLOG00000006309 #34 SLC13A1 (ENSPLOG00000006227) #35 CADPS2 (ENSPLOG00000005636) #36 FEZF1 (ENSPLOG00000005395) AASS (ENSPLOG00000005333) Cat MODERN SPECIES 1 CALU (ENSFCAG00000034966) GARIN1B (ENSFCAG00000008096) #7 GARIN1A (ENSFCAG00000000950) #8 ENSFCAG00000023233 IMPDH1 (ENSFCAG00000000949) #9 PRRT4 (ENSFCAG00000028746) #11 LEP (ENSFCAG00000035912) #13 LRRC4 (ENSFCAG00000031071) #15 ENSFCAG00000051986 SND1 (ENSFCAG00000008289) #14 PAX4 (ENSFCAG00000005485) #16 FSCN3 (ENSFCAG00000005484) #17 ARF5 (ENSFCAG00000005482) #18 GCC1 (ENSFCAG00000005480) #19 ZNF800 (ENSFCAG00000025630) #20 GRM8 (ENSFCAG00000003843) #22 POT1 (ENSFCAG00000023466) #24 GPR37 (ENSFCAG00000036887) #26 TMEM229A (ENSFCAG00000041248) SPAM1 (ENSFCAG00000010407) #27 HYAL4 (ENSFCAG00000010550) #28 WASL (ENSFCAG00000010127) #29 ASB15 (ENSFCAG00000004489) #30 NDUFA5 (ENSFCAG00000039291) #32 IQUB (ENSFCAG00000008476) #34 SLC13A1 (ENSFCAG00000013589) #35 CADPS2 (ENSFCAG00000000574) #36 FEZF1 (ENSFCAG00000013521) AASS (ENSFCAG00000029895) PTPRZ1 (ENSFCAG00000015760) ENSFCAG00000030800 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 Chiroptera ANCESTRAL SPECIES 41 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 ENSGT00940000163928 Megabat MODERN SPECIES 2580 GRM8 (ENSPVAG00000000902) #22 Microchiroptera ANCESTRAL SPECIES 23 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000169914 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 ENSGT00940000163382 #37 ENSGT00940000163928 Microbat MODERN SPECIES 1010 LEP (ENSMLUG00000008588) #13 SND1 (ENSMLUG00000017130) #14 LRRC4 (ENSMLUG00000003090) #15 PAX4 (ENSMLUG00000030302) #16 FSCN3 (ENSMLUG00000017127) #17 ARF5 (ENSMLUG00000017122) #18 GCC1 (ENSMLUG00000017118) #19 ENSMLUG00000023252 ZNF800 (ENSMLUG00000011636) #20 GRM8 (ENSMLUG00000011612) #22 POT1 (ENSMLUG00000001872) #24 SPAM1 (ENSMLUG00000012742) #27 HYAL4 (ENSMLUG00000022537) #28 ENSMLUG00000024052 WASL (ENSMLUG00000014937) #29 LMOD2 (ENSMLUG00000014932) #30 ASB15 (ENSMLUG00000014924) #31 IQUB (ENSMLUG00000001027) #34 SLC13A1 (ENSMLUG00000001020) #35 TAS2R16 (ENSMLUG00000014220) ENSMLUG00000024279 ENSMLUG00000026399 RNF148 (ENSMLUG00000030104) #37 RNF133 (ENSMLUG00000005094) CADPS2 (ENSMLUG00000005076) #36 Greater horseshoe bat MODERN SPECIES 18 GARIN1B (ENSRFEG00010019702) #7 GARIN1A (ENSRFEG00010019736) #8 ENSRFEG00010019784 ENSRFEG00010019793 IMPDH1 (ENSRFEG00010019831) #9 PRRT4 (ENSRFEG00010020096) #10 RBM28 (ENSRFEG00010020139) #11 LEP (ENSRFEG00010020262) #13 SND1 (ENSRFEG00010020293) #14 LRRC4 (ENSRFEG00010013533) #15 PAX4 (ENSRFEG00010013577) #16 FSCN3 (ENSRFEG00010013976) #17 ARF5 (ENSRFEG00010014094) #18 GCC1 (ENSRFEG00010014150) #19 ZNF800 (ENSRFEG00010014212) #20 GRM8 (ENSRFEG00010014267) #22 ENSRFEG00010014384 ENSRFEG00010014529 ENSRFEG00010014577 POT1 (ENSRFEG00010014626) #24 GPR37 (ENSRFEG00010014750) #26 TMEM229A (ENSRFEG00010014794) SPAM1 (ENSRFEG00010014812) #27 HYAL4 (ENSRFEG00010014843) #28 WASL (ENSRFEG00010014925) #29 LMOD2 (ENSRFEG00010015166) #30 ASB15 (ENSRFEG00010015245) #31 ENSRFEG00010015311 #32 IQUB (ENSRFEG00010015538) #34 SLC13A1 (ENSRFEG00010015742) #35 TAS2R16 (ENSRFEG00010015907) Equus ANCESTRAL SPECIES 13 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000165441 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000153340.B.j ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT01100000263477.B.d.b ENSGT00590000083094.a.b #36 Donkey MODERN SPECIES CALU (ENSEASG00005008542) GARIN1B (ENSEASG00005008541) #7 GARIN1A (ENSEASG00005008539) #8 HILPDA (ENSEASG00005008537) IMPDH1 (ENSEASG00005008533) #9 PRRT4 (ENSEASG00005038080) #10 RBM28 (ENSEASG00005008528) #11 LEP (ENSEASG00005038822) #13 SND1 (ENSEASG00005008513) #14 LRRC4 (ENSEASG00005008518) #15 PAX4 (ENSEASG00005008510) #16 FSCN3 (ENSEASG00005008505) #17 ENSEASG00005008504 GCC1 (ENSEASG00005008503) #19 ZNF800 (ENSEASG00005008502) #20 GRM8 (ENSEASG00005008497) #22 ENSEASG00005008492 POT1 (ENSEASG00005008485) #24 GPR37 (ENSEASG00005008483) #26 TMEM229A (ENSEASG00005008480) ENSEASG00005025329 #27 HYAL4 (ENSEASG00005009393) #28 ENSEASG00005009367 ##28 WASL (ENSEASG00005009349) #29 LMOD2 (ENSEASG00005035591) #30 ASB15 (ENSEASG00005009342) #31 NDUFA5 (ENSEASG00005009337) #32 IQUB (ENSEASG00005009328) #34 SLC13A1 (ENSEASG00005009316) #35 TAS2R16 (ENSEASG00005009304) CADPS2 (ENSEASG00005009041) #36 Horse MODERN SPECIES 25 CALU (ENSECAG00000055523) GARIN1B (ENSECAG00000022119) #7 GARIN1A (ENSECAG00000047048) #8 ENSECAG00000003049 IMPDH1 (ENSECAG00000015391) #9 PRRT4 (ENSECAG00000037532) #10 RBM28 (ENSECAG00000007745) #11 LEP (ENSECAG00000030283) #13 LRRC4 (ENSECAG00000002958) #15 SND1 (ENSECAG00000011451) #14 PAX4 (ENSECAG00000008343) #16 FSCN3 (ENSECAG00000021353) #17 ARF5 (ENSECAG00000020291) GCC1 (ENSECAG00000019925) #19 ZNF800 (ENSECAG00000019340) #20 GRM8 (ENSECAG00000019015) #22 ENSECAG00000054098 ENSECAG00000017360 POT1 (ENSECAG00000008647) #24 GPR37 (ENSECAG00000008565) #26 TMEM229A (ENSECAG00000049752) SPAM1 (ENSECAG00000006212) #27 HYAL4 (ENSECAG00000024782) #28 ENSECAG00000023576 ##28 WASL (ENSECAG00000015578) #29 LMOD2 (ENSECAG00000057098) #30 ASB15 (ENSECAG00000011379) #31 IQUB (ENSECAG00000005249) #34 SLC13A1 (ENSECAG00000020615) #35 CADPS2 (ENSECAG00000024021) #36 FEZF1 (ENSECAG00000022989) Atlantogenata ANCESTRAL SPECIES 7 ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00390000014201 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Afrotheria ANCESTRAL SPECIES 5 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a Afrotheria_a ANCESTRAL SPECIES 5 ENSGT01030000234549.a.a.a.a.b ENSGT01010000222360.E.c ENSGT00940000161477 #7 ENSGT00940000162027 #8 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a Hyrax MODERN SPECIES 6008 GRM8 (ENSPCAG00000016936) #22 Elephant DUPLICATION Elephant MODERN SPECIES 428 OPN1SW (ENSLAFG00000003803) CALU (ENSLAFG00000003798) GARIN1B (ENSLAFG00000003795) #7 GARIN1A (ENSLAFG00000029416) #8 IMPDH1 (ENSLAFG00000008090) #9 ENSLAFG00000030090 #10 RBM28 (ENSLAFG00000010717) #11 LEP (ENSLAFG00000010714) #13 LRRC4 (ENSLAFG00000009705) #15 SND1 (ENSLAFG00000009696) #14 PAX4 (ENSLAFG00000005297) #16 FSCN3 (ENSLAFG00000011474) #17 ARF5 (ENSLAFG00000011469) #18 GCC1 (ENSLAFG00000000145) #19 ZNF800 (ENSLAFG00000000456) #20 ENSLAFG00000029686 #22 ENSLAFG00000000453 #22 POT1 (ENSLAFG00000005796) #24 GPR37 (ENSLAFG00000015710) #26 ENSLAFG00000004093 HYAL4 (ENSLAFG00000031289) #28 ENSLAFG00000026292 ##28 WASL (ENSLAFG00000021439) #29 LMOD2 (ENSLAFG00000007192) #30 ASB15 (ENSLAFG00000011116) #31 NDUFA5 (ENSLAFG00000030971) #32 IQUB (ENSLAFG00000002619) #34 SLC13A1 (ENSLAFG00000005670) #35 CADPS2 (ENSLAFG00000013553) #36 FEZF1 (ENSLAFG00000013550) AASS (ENSLAFG00000004573) Elephant MODERN SPECIES 428 CALU (ENSLAFG00000003798) GARIN1B (ENSLAFG00000003795) #7 GARIN1A (ENSLAFG00000029416) #8 IMPDH1 (ENSLAFG00000008090) #9 ENSLAFG00000030090 #10 RBM28 (ENSLAFG00000010717) #11 LEP (ENSLAFG00000010714) #13 LRRC4 (ENSLAFG00000009705) #15 SND1 (ENSLAFG00000009696) #14 PAX4 (ENSLAFG00000005297) #16 FSCN3 (ENSLAFG00000011474) #17 ARF5 (ENSLAFG00000011469) #18 GCC1 (ENSLAFG00000000145) #19 ZNF800 (ENSLAFG00000000456) #20 ENSLAFG00000029686 #22 ENSLAFG00000000453 #22 POT1 (ENSLAFG00000005796) #24 GPR37 (ENSLAFG00000015710) #26 ENSLAFG00000004093 HYAL4 (ENSLAFG00000031289) #28 ENSLAFG00000026292 ##28 WASL (ENSLAFG00000021439) #29 LMOD2 (ENSLAFG00000007192) #30 ASB15 (ENSLAFG00000011116) #31 NDUFA5 (ENSLAFG00000030971) #32 IQUB (ENSLAFG00000002619) #34 SLC13A1 (ENSLAFG00000005670) #35 CADPS2 (ENSLAFG00000013553) #36 FEZF1 (ENSLAFG00000013550) AASS (ENSLAFG00000004573) PTPRZ1 (ENSLAFG00000004565) Xenarthra ANCESTRAL SPECIES 636 ENSGT00510000047270 #14 ENSGT00940000159260 #15 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 Sloth MODERN SPECIES 6450 GRM8 (ENSCHOG00000007052) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 2844 ENSDNOG00000049397 SND1 (ENSDNOG00000006795) #14 LRRC4 (ENSDNOG00000007097) #15 PAX4 (ENSDNOG00000030639) #16 FSCN3 (ENSDNOG00000008648) #17 ARF5 (ENSDNOG00000013387) #18 GCC1 (ENSDNOG00000044644) #19 ZNF800 (ENSDNOG00000009240) #20 ENSDNOG00000036007 #22 ENSDNOG00000035098 #22 Armadillo MODERN SPECIES 2844 ENSDNOG00000049397 SND1 (ENSDNOG00000006795) #14 LRRC4 (ENSDNOG00000007097) #15 PAX4 (ENSDNOG00000030639) #16 FSCN3 (ENSDNOG00000008648) #17 ARF5 (ENSDNOG00000013387) #18 GCC1 (ENSDNOG00000044644) #19 ZNF800 (ENSDNOG00000009240) #20 ENSDNOG00000036007 #22 ENSDNOG00000035098 #22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000161477.a #7 ENSGT00940000161477.b #7 ENSGT00940000169914 ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000161477.a #7 ENSGT00940000161477.b #7 ENSGT00940000169914 ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Tasmanian devil MODERN SPECIES 4 GARIN1B (ENSSHAG00000021537) #7 ENSSHAG00000022514 IMPDH1 (ENSSHAG00000024079) #9 PRRT4 (ENSSHAG00000029521) #10 RBM28 (ENSSHAG00000017017) #11 LEP (ENSSHAG00000024371) #13 LRRC4 (ENSSHAG00000020655) #15 ENSSHAG00000031981 SND1 (ENSSHAG00000015359) #14 ENSSHAG00000015143 #16 FSCN3 (ENSSHAG00000015072) #17 ARF5 (ENSSHAG00000022657) #18 GCC1 (ENSSHAG00000015034) #19 ZNF800 (ENSSHAG00000014391) #20 ENSSHAG00000022164 GRM8 (ENSSHAG00000008019) #22 POT1 (ENSSHAG00000015868) #24 GPR37 (ENSSHAG00000028962) #26 TMEM229A (ENSSHAG00000020692) ENSSHAG00000011812 #27 HYAL4 (ENSSHAG00000008511) #28 ENSSHAG00000011027 ##28 WASL (ENSSHAG00000030619) #29 LMOD2 (ENSSHAG00000009742) #30 ASB15 (ENSSHAG00000009459) #31 ENSSHAG00000024396 #32 IQUB (ENSSHAG00000008101) #34 SLC13A1 (ENSSHAG00000001720) #35 RNF148 (ENSSHAG00000009015) #37 RNF133 (ENSSHAG00000008983) CADPS2 (ENSSHAG00000002469) #36 Diprotodontia ANCESTRAL SPECIES 28 ENSGT00940000161477.a #7 ENSGT00940000161477.b #7 ENSGT00940000169914 ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 Wallaby MODERN SPECIES 8673 GRM8 (ENSMEUG00000012625) #22 Diprotodontia_a ANCESTRAL SPECIES 27 ENSGT00940000161477.b #7 ENSGT00940000169914 ENSGT00950000185983 ENSGT00940000154156.d #9 ENSGT00730000111591 #10 ENSGT00550000074976 #11 ENSGT00390000011772 #13 ENSGT00940000159260 #15 ENSGT00510000047270 #14 ENSGT00940000161709 #16 ENSGT00950000183157.b #17 ENSGT00940000156878 #18 ENSGT00940000153772.A #19 ENSGT00940000168379 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099.yb #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382 #37 ENSGT00940000163928 ENSGT00590000083094.a.b #36 koala DUPLICATION koala MODERN SPECIES 96 ENSPCIG00000031795 IMPDH1 (ENSPCIG00000012807) #9 PRRT4 (ENSPCIG00000012808) #10 ENSPCIG00000012809 RBM28 (ENSPCIG00000012810) #11 LEP (ENSPCIG00000012815) #13 SND1 (ENSPCIG00000011561) #14 LRRC4 (ENSPCIG00000011570) #15 PAX4 (ENSPCIG00000011481) #16 FSCN3 (ENSPCIG00000011477) #17 ARF5 (ENSPCIG00000037383) #18 GCC1 (ENSPCIG00000011474) #19 ENSPCIG00000031599 ENSPCIG00000011469 ZNF800 (ENSPCIG00000011468) #20 ENSPCIG00000011467 #22 GRM8 (ENSPCIG00000034600) #22 koala MODERN SPECIES 96 IMPDH1 (ENSPCIG00000012807) #9 PRRT4 (ENSPCIG00000012808) #10 ENSPCIG00000012809 RBM28 (ENSPCIG00000012810) #11 LEP (ENSPCIG00000012815) #13 SND1 (ENSPCIG00000011561) #14 LRRC4 (ENSPCIG00000011570) #15 PAX4 (ENSPCIG00000011481) #16 FSCN3 (ENSPCIG00000011477) #17 ARF5 (ENSPCIG00000037383) #18 GCC1 (ENSPCIG00000011474) #19 ENSPCIG00000031599 ENSPCIG00000011469 ZNF800 (ENSPCIG00000011468) #20 ENSPCIG00000011467 #22 GRM8 (ENSPCIG00000034600) #22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1071 OPN1SW (ENSVURG00010004385) CALU (ENSVURG00010004310) GARIN1B (ENSVURG00010004277) #7 ENSVURG00010004265 IMPDH1 (ENSVURG00010003732) #9 PRRT4 (ENSVURG00010003660) #10 RBM28 (ENSVURG00010003624) #11 LEP (ENSVURG00010003614) #13 LRRC4 (ENSVURG00010003602) #15 SND1 (ENSVURG00010003582) #14 PAX4 (ENSVURG00010003324) #16 FSCN3 (ENSVURG00010003289) #17 GCC1 (ENSVURG00010003282) #19 ENSVURG00010003258 ZNF800 (ENSVURG00010003230) #20 ENSVURG00010003219 #22 ENSVURG00010003211 GRM8 (ENSVURG00010003135) #22 ENSVURG00010003090 ENSVURG00010003083 POT1 (ENSVURG00010002998) #24 GPR37 (ENSVURG00010002981) #26 TMEM229A (ENSVURG00010002966) ENSVURG00010002948 #27 HYAL4 (ENSVURG00010002927) #28 Common wonbat MODERN SPECIES 1071 GARIN1B (ENSVURG00010004277) #7 ENSVURG00010004265 IMPDH1 (ENSVURG00010003732) #9 PRRT4 (ENSVURG00010003660) #10 RBM28 (ENSVURG00010003624) #11 LEP (ENSVURG00010003614) #13 LRRC4 (ENSVURG00010003602) #15 SND1 (ENSVURG00010003582) #14 PAX4 (ENSVURG00010003324) #16 FSCN3 (ENSVURG00010003289) #17 GCC1 (ENSVURG00010003282) #19 ENSVURG00010003258 ZNF800 (ENSVURG00010003230) #20 ENSVURG00010003219 #22 ENSVURG00010003211 GRM8 (ENSVURG00010003135) #22 ENSVURG00010003090 ENSVURG00010003083 POT1 (ENSVURG00010002998) #24 GPR37 (ENSVURG00010002981) #26 TMEM229A (ENSVURG00010002966) ENSVURG00010002948 #27 HYAL4 (ENSVURG00010002927) #28 Opossum DUPLICATION Opossum MODERN SPECIES 7 CALU (ENSMODG00000015080) ENSMODG00000015091 #7 ENSMODG00000029529 #7 ENSMODG00000038899 IMPDH1 (ENSMODG00000015140) #9 RBM28 (ENSMODG00000015151) #11 LEP (ENSMODG00000048845) #13 LRRC4 (ENSMODG00000015194) #15 ENSMODG00000040907 SND1 (ENSMODG00000015182) #14 FSCN3 (ENSMODG00000015224) #17 ARF5 (ENSMODG00000015229) #18 GCC1 (ENSMODG00000015233) #19 ENSMODG00000040001 ZNF800 (ENSMODG00000015235) #20 ENSMODG00000051280 #22 GRM8 (ENSMODG00000015246) #22 ENSMODG00000039639 ENSMODG00000046369 ENSMODG00000029382 POT1 (ENSMODG00000015312) #24 GPR37 (ENSMODG00000015316) #26 ENSMODG00000048727 TMEM229A (ENSMODG00000027397) SPAM1 (ENSMODG00000015368) #27 HYAL4 (ENSMODG00000015370) #28 ENSMODG00000015371 ##28 ENSMODG00000015374 WASL (ENSMODG00000015378) #29 ASB15 (ENSMODG00000015383) #31 NDUFA5 (ENSMODG00000045978) #32 Opossum MODERN SPECIES 7 ENSMODG00000015091 #7 ENSMODG00000029529 #7 ENSMODG00000038899 IMPDH1 (ENSMODG00000015140) #9 RBM28 (ENSMODG00000015151) #11 LEP (ENSMODG00000048845) #13 LRRC4 (ENSMODG00000015194) #15 ENSMODG00000040907 SND1 (ENSMODG00000015182) #14 FSCN3 (ENSMODG00000015224) #17 ARF5 (ENSMODG00000015229) #18 GCC1 (ENSMODG00000015233) #19 ENSMODG00000040001 ZNF800 (ENSMODG00000015235) #20 ENSMODG00000051280 #22 GRM8 (ENSMODG00000015246) #22 ENSMODG00000039639 ENSMODG00000046369 ENSMODG00000029382 POT1 (ENSMODG00000015312) #24 GPR37 (ENSMODG00000015316) #26 ENSMODG00000048727 TMEM229A (ENSMODG00000027397) SPAM1 (ENSMODG00000015368) #27 HYAL4 (ENSMODG00000015370) #28 ENSMODG00000015371 ##28 ENSMODG00000015374 WASL (ENSMODG00000015378) #29 ASB15 (ENSMODG00000015383) #31 NDUFA5 (ENSMODG00000045978) #32 ENSMODG00000037075 Platypus MODERN SPECIES 1 ATP6V1F (ENSOANG00000011447) FLNC (ENSOANG00000011443) ENSOANG00000011442 CALU (ENSOANG00000011440) ENSOANG00000031572 #7 IMPDH1 (ENSOANG00000000814) #9 ENSOANG00000000815 #11 LEP (ENSOANG00000000816) #13 LRRC4 (ENSOANG00000050749) #15 SND1 (ENSOANG00000000817) #14 ENSOANG00000000819 #16 FSCN3 (ENSOANG00000000820) #17 ARF5 (ENSOANG00000000821) #18 GCC1 (ENSOANG00000000822) #19 ZNF800 (ENSOANG00000000823) #20 GRM8 (ENSOANG00000000818) #22 POT1 (ENSOANG00000000403) #24 GPR37 (ENSOANG00000000404) #26 ENSOANG00000029438 ENSOANG00000000405 ENSOANG00000000407 #27 HYAL4 (ENSOANG00000000409) #28 ENSOANG00000000410 ##28 WASL (ENSOANG00000004830) #29 LMOD2 (ENSOANG00000004828) #30 NDUFA5 (ENSOANG00000004827) #32 ENSOANG00000004826 #34 ENSOANG00000004825 SLC13A1 (ENSOANG00000004824) #35 ENSOANG00000039363 #37 RNF133 (ENSOANG00000015935) Sauria ANCESTRAL SPECIES 4 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Archosauria ANCESTRAL SPECIES 4 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Aves ANCESTRAL SPECIES 1 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Neognathae ANCESTRAL SPECIES 3 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Great tit MODERN SPECIES 10 PIM3 (ENSPMJG00000009480) IL17REL (ENSPMJG00000009552) MLC1 (ENSPMJG00000009553) MOV10L1 (ENSPMJG00000009555) PANX2 (ENSPMJG00000009559) ENSPMJG00000009560 TRABD (ENSPMJG00000009637) SELENOO (ENSPMJG00000009646) TUBGCP6 (ENSPMJG00000009651) ENSPMJG00000009656 MAPK12 (ENSPMJG00000009657) MAPK11 (ENSPMJG00000009658) PLXNB2 (ENSPMJG00000009691) ENSPMJG00000009706 ZNF800 (ENSPMJG00000009751) #20 GRM8 (ENSPMJG00000009799) #22 POT1 (ENSPMJG00000009830) #24 GPR37 (ENSPMJG00000009841) #26 ENSPMJG00000009923 SPAM1 (ENSPMJG00000009925) #27 ENSPMJG00000009948 ##28 WASL (ENSPMJG00000009949) #29 LMOD2 (ENSPMJG00000009951) #30 ENSPMJG00000009952 #31 NDUFA5 (ENSPMJG00000009953) #32 IQUB (ENSPMJG00000009955) #34 ENSPMJG00000009956 SLC13A1 (ENSPMJG00000010001) #35 CADPS2 (ENSPMJG00000010030) #36 FEZF1 (ENSPMJG00000010035) AASS (ENSPMJG00000010036) Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Medium ground finch MODERN SPECIES 27 PIM3 (ENSGFOG00000013349) MLC1 (ENSGFOG00000013343) MOV10L1 (ENSGFOG00000013337) PANX2 (ENSGFOG00000013335) TRABD (ENSGFOG00000013334) SELENOO (ENSGFOG00000013332) TUBGCP6 (ENSGFOG00000013327) HDAC10 (ENSGFOG00000013319) ENSGFOG00000013314 MAPK12 (ENSGFOG00000013309) MAPK11 (ENSGFOG00000013308) PLXNB2 (ENSGFOG00000013304) ZNF800 (ENSGFOG00000013299) #20 GRM8 (ENSGFOG00000013295) #22 ENSGFOG00000013293 POT1 (ENSGFOG00000013291) #24 GPR37 (ENSGFOG00000013286) #26 ENSGFOG00000013284 SPAM1 (ENSGFOG00000013279) #27 ENSGFOG00000013273 ##28 WASL (ENSGFOG00000013269) #29 LMOD2 (ENSGFOG00000013267) #30 ENSGFOG00000013265 #31 NDUFA5 (ENSGFOG00000013262) #32 IQUB (ENSGFOG00000013261) #34 ENSGFOG00000013259 SLC13A1 (ENSGFOG00000012916) #35 CADPS2 (ENSGFOG00000012153) #36 FEZF1 (ENSGFOG00000012083) Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Zebra finch MODERN SPECIES 11 PIM3 (ENSTGUG00000003897) IL17REL (ENSTGUG00000003914) MLC1 (ENSTGUG00000003918) MOV10L1 (ENSTGUG00000003947) PANX2 (ENSTGUG00000003957) TRABD (ENSTGUG00000003963) ENSTGUG00000028098 SELENOO (ENSTGUG00000003976) TUBGCP6 (ENSTGUG00000003993) HDAC10 (ENSTGUG00000004003) ENSTGUG00000004040 MAPK12 (ENSTGUG00000004046) MAPK11 (ENSTGUG00000004078) PLXNB2 (ENSTGUG00000004115) ZNF800 (ENSTGUG00000004194) #20 GRM8 (ENSTGUG00000004198) #22 POT1 (ENSTGUG00000004218) #24 GPR37 (ENSTGUG00000023267) #26 ENSTGUG00000004255 SPAM1 (ENSTGUG00000004270) #27 ENSTGUG00000004273 ##28 WASL (ENSTGUG00000004276) #29 LMOD2 (ENSTGUG00000004327) #30 ENSTGUG00000004331 #34 ENSTGUG00000004340 SLC13A1 (ENSTGUG00000004349) #35 CADPS2 (ENSTGUG00000004403) #36 FEZF1 (ENSTGUG00000004488) AASS (ENSTGUG00000004496) PTPRZ1 (ENSTGUG00000004543) FAM3C (ENSTGUG00000004613) Common canary MODERN SPECIES 6 IL17REL (ENSSCAG00000004040) MLC1 (ENSSCAG00000004030) MOV10L1 (ENSSCAG00000004014) PANX2 (ENSSCAG00000004007) ENSSCAG00000004002 TRABD (ENSSCAG00000003994) SELENOO (ENSSCAG00000003978) TUBGCP6 (ENSSCAG00000003965) HDAC10 (ENSSCAG00000003937) ENSSCAG00000003923 MAPK12 (ENSSCAG00000003903) MAPK11 (ENSSCAG00000003851) ENSSCAG00000003837 PLXNB2 (ENSSCAG00000003823) ZNF800 (ENSSCAG00000003814) #20 GRM8 (ENSSCAG00000003804) #22 POT1 (ENSSCAG00000003779) #24 GPR37 (ENSSCAG00000003770) #26 ENSSCAG00000003760 SPAM1 (ENSSCAG00000003752) #27 ENSSCAG00000003738 ##28 WASL (ENSSCAG00000003718) #29 LMOD2 (ENSSCAG00000003712) #30 ENSSCAG00000003690 #31 NDUFA5 (ENSSCAG00000003685) #32 IQUB (ENSSCAG00000003666) #34 ENSSCAG00000003656 SLC13A1 (ENSSCAG00000003643) #35 CADPS2 (ENSSCAG00000001348) #36 FEZF1 (ENSSCAG00000000429) AASS (ENSSCAG00000000401) Flycatcher MODERN SPECIES 10 MLC1 (ENSFALG00000009663) MOV10L1 (ENSFALG00000009671) PANX2 (ENSFALG00000009675) ENSFALG00000015286 TRABD (ENSFALG00000025297) SELENOO (ENSFALG00000009691) TUBGCP6 (ENSFALG00000009698) HDAC10 (ENSFALG00000009709) ENSFALG00000009714 MAPK12 (ENSFALG00000009718) MAPK11 (ENSFALG00000009736) PLXNB2 (ENSFALG00000009767) ZNF800 (ENSFALG00000009810) #20 ENSFALG00000023996 ENSFALG00000027645 GRM8 (ENSFALG00000009817) #22 POT1 (ENSFALG00000009838) #24 GPR37 (ENSFALG00000025236) #26 ENSFALG00000028250 SPAM1 (ENSFALG00000024464) #27 ENSFALG00000009879 ##28 WASL (ENSFALG00000009888) #29 LMOD2 (ENSFALG00000009898) #30 ENSFALG00000023113 #31 NDUFA5 (ENSFALG00000009900) #32 IQUB (ENSFALG00000009903) #34 ENSFALG00000009908 SLC13A1 (ENSFALG00000009911) #35 CADPS2 (ENSFALG00000009915) #36 FEZF1 (ENSFALG00000009923) AASS (ENSFALG00000009936) Neognathae_c ANCESTRAL SPECIES ENSGT00940000160071 ENSGT00940000153394.c.b ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Kakapo MODERN SPECIES 20 ENSSHBG00005016569 MLC1 (ENSSHBG00005016578) ENSSHBG00005016588 PANX2 (ENSSHBG00005016599) ENSSHBG00005016612 TRABD (ENSSHBG00005016625) SELENOO (ENSSHBG00005016637) TUBGCP6 (ENSSHBG00005016652) HDAC10 (ENSSHBG00005016661) ENSSHBG00005016666 ENSSHBG00005000844 MAPK12 (ENSSHBG00005000851) MAPK11 (ENSSHBG00005000855) PLXNB2 (ENSSHBG00005000883) ZNF800 (ENSSHBG00005000897) #20 GRM8 (ENSSHBG00005001610) #22 POT1 (ENSSHBG00005001641) #24 GPR37 (ENSSHBG00005001667) #26 ENSSHBG00005001702 SPAM1 (ENSSHBG00005001770) #27 ENSSHBG00005001861 ##28 WASL (ENSSHBG00005001904) #29 LMOD2 (ENSSHBG00005001924) #30 ASB15 (ENSSHBG00005001937) #31 IQUB (ENSSHBG00005001979) #34 ENSSHBG00005002016 SLC13A1 (ENSSHBG00005002158) #35 CADPS2 (ENSSHBG00005003467) #36 FEZF1 (ENSSHBG00005008618) AASS (ENSSHBG00005008699) PTPRZ1 (ENSSHBG00005009048) Golden eagle MODERN SPECIES 21 CRELD2 (ENSACCG00020010924) ENSACCG00020010941 MLC1 (ENSACCG00020010952) ENSACCG00020010967 PANX2 (ENSACCG00020010980) ENSACCG00020010990 TRABD (ENSACCG00020011429) SELENOO (ENSACCG00020011453) TUBGCP6 (ENSACCG00020011483) HDAC10 (ENSACCG00020011516) ENSACCG00020011538 MAPK12 (ENSACCG00020011566) MAPK11 (ENSACCG00020011618) PLXNB2 (ENSACCG00020011661) ZNF800 (ENSACCG00020011714) #20 GRM8 (ENSACCG00020011743) #22 POT1 (ENSACCG00020011777) #24 GPR37 (ENSACCG00020011806) #26 ENSACCG00020011830 SPAM1 (ENSACCG00020011959) #27 ENSACCG00020012045 ##28 WASL (ENSACCG00020012101) #29 LMOD2 (ENSACCG00020012138) #30 ASB15 (ENSACCG00020012171) #31 NDUFA5 (ENSACCG00020012194) #32 IQUB (ENSACCG00020012226) #34 ENSACCG00020012259 ENSACCG00020012300 ENSACCG00020012332 #35 CADPS2 (ENSACCG00020012430) #36 FEZF1 (ENSACCG00020012596) Galloanserae ANCESTRAL SPECIES 3 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Anatidae ANCESTRAL SPECIES 28 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.e #36 ENSGT00940000159477 ENSGT00390000013249 Pink-footed goose MODERN SPECIES 32 PIM3 (ENSABRG00000014401) IL17REL (ENSABRG00000014381) MLC1 (ENSABRG00000014377) MOV10L1 (ENSABRG00000014362) PANX2 (ENSABRG00000014359) ENSABRG00000014357 TRABD (ENSABRG00000014351) SELENOO (ENSABRG00000014346) TUBGCP6 (ENSABRG00000014330) HDAC10 (ENSABRG00000014313) ENSABRG00000014312 MAPK12 (ENSABRG00000014303) MAPK11 (ENSABRG00000014292) PLXNB2 (ENSABRG00000013365) ZNF800 (ENSABRG00000013281) #20 GRM8 (ENSABRG00000013274) #22 POT1 (ENSABRG00000013243) #24 GPR37 (ENSABRG00000013226) #26 ENSABRG00000013204 SPAM1 (ENSABRG00000013201) #27 ENSABRG00000013173 ##28 WASL (ENSABRG00000013163) #29 LMOD2 (ENSABRG00000013153) #30 ASB15 (ENSABRG00000013148) #31 NDUFA5 (ENSABRG00000013142) #32 IQUB (ENSABRG00000013138) #34 ENSABRG00000013134 ENSABRG00000013133 #35 CADPS2 (ENSABRG00000013030) #36 FEZF1 (ENSABRG00000012997) AASS (ENSABRG00000012966) Duck MODERN SPECIES PIM3 (ENSAPLG00000016454) IL17REL (ENSAPLG00000016050) MLC1 (ENSAPLG00000016154) MOV10L1 (ENSAPLG00000002129) PANX2 (ENSAPLG00000002700) ENSAPLG00000001582 TRABD (ENSAPLG00000002798) SELENOO (ENSAPLG00000003085) TUBGCP6 (ENSAPLG00000003180) HDAC10 (ENSAPLG00000003588) ENSAPLG00000004018 MAPK12 (ENSAPLG00000004157) MAPK11 (ENSAPLG00000004462) PLXNB2 (ENSAPLG00000004968) ZNF800 (ENSAPLG00000014433) #20 GRM8 (ENSAPLG00000013904) #22 POT1 (ENSAPLG00000016011) #24 GPR37 (ENSAPLG00000015956) #26 ENSAPLG00000015872 SPAM1 (ENSAPLG00000015825) #27 ENSAPLG00000015709 ##28 WASL (ENSAPLG00000015306) #29 LMOD2 (ENSAPLG00000015178) #30 ASB15 (ENSAPLG00000014812) #31 NDUFA5 (ENSAPLG00000019976) #32 IQUB (ENSAPLG00000014571) #34 ENSAPLG00000014367 SLC13A1 (ENSAPLG00000013575) #35 ENSAPLG00000014404 #36 ENSAPLG00000031194 #36 FEZF1 (ENSAPLG00000015055) Phasianidae ANCESTRAL SPECIES ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Phasianidae_b ANCESTRAL SPECIES 9 ENSGT00940000153394.c.b ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Turkey MODERN SPECIES IL17REL (ENSMGAG00000007847) MLC1 (ENSMGAG00000007862) MOV10L1 (ENSMGAG00000007902) PANX2 (ENSMGAG00000007981) ENSMGAG00000022752 TRABD (ENSMGAG00000007985) SELENOO (ENSMGAG00000008004) TUBGCP6 (ENSMGAG00000008013) HDAC10 (ENSMGAG00000008036) ENSMGAG00000008065 MAPK12 (ENSMGAG00000008074) MAPK11 (ENSMGAG00000008092) PLXNB2 (ENSMGAG00000016484) ENSMGAG00000019941 ZNF800 (ENSMGAG00000008232) #20 GRM8 (ENSMGAG00000008237) #22 POT1 (ENSMGAG00000008259) #24 GPR37 (ENSMGAG00000008322) #26 ENSMGAG00000010101 SPAM1 (ENSMGAG00000008329) #27 ENSMGAG00000008334 ##28 WASL (ENSMGAG00000008344) #29 LMOD2 (ENSMGAG00000008371) #30 ASB15 (ENSMGAG00000008383) #31 ENSMGAG00000008411 #32 IQUB (ENSMGAG00000008434) #34 ENSMGAG00000008443 SLC13A1 (ENSMGAG00000008451) #35 CADPS2 (ENSMGAG00000008495) #36 FEZF1 (ENSMGAG00000008529) AASS (ENSMGAG00000008535) Chicken MODERN SPECIES PIM3 (ENSGALG00010008094) IL17REL (ENSGALG00010008043) MLC1 (ENSGALG00010008055) MOV10L1 (ENSGALG00010001208) PANX2 (ENSGALG00010001210) ENSGALG00010001919 TRABD (ENSGALG00010001540) SELENOO (ENSGALG00010001545) TUBGCP6 (ENSGALG00010001552) HDAC10 (ENSGALG00010001559) ENSGALG00010001578 MAPK12 (ENSGALG00010001611) MAPK11 (ENSGALG00010001628) PLXNB2 (ENSGALG00010001220) ZNF800 (ENSGALG00010001222) #20 GRM8 (ENSGALG00010001223) #22 POT1 (ENSGALG00010001194) #24 GPR37 (ENSGALG00010001448) #26 ARL8BL (ENSGALG00010001647) SPAM1 (ENSGALG00010001664) #27 ENSGALG00010001667 HYAL6 (ENSGALG00010001673) ##28 WASL (ENSGALG00010001686) #29 LMOD2 (ENSGALG00010001695) #30 ASB15 (ENSGALG00010001699) #31 NDUFA5 (ENSGALG00010001701) #32 IQUB (ENSGALG00010001706) #34 ATP6AP1 (ENSGALG00010001712) SLC13A1 (ENSGALG00010001714) #35 CADPS2 (ENSGALG00010001745) #36 FEZF1 (ENSGALG00010001917) Japanese quail MODERN SPECIES IL17REL (ENSCJPG00005008433) MLC1 (ENSCJPG00005008438) MOV10L1 (ENSCJPG00005008441) PANX2 (ENSCJPG00005008442) ENSCJPG00005008443 ENSCJPG00005008444 TRABD (ENSCJPG00005008445) SELENOO (ENSCJPG00005008556) TUBGCP6 (ENSCJPG00005008557) HDAC10 (ENSCJPG00005008558) ENSCJPG00005008559 ENSCJPG00005008560 MAPK11 (ENSCJPG00005008561) PLXNB2 (ENSCJPG00005008647) ZNF800 (ENSCJPG00005008684) #20 GRM8 (ENSCJPG00005008701) #22 WNT16 (ENSCJPG00005008702) FAM3C (ENSCJPG00005008719) PTPRZ1 (ENSCJPG00005008728) AASS (ENSCJPG00005009700) FEZF1 (ENSCJPG00005009701) CADPS2 (ENSCJPG00005009705) #36 SLC13A1 (ENSCJPG00005012104) #35 ENSCJPG00005012107 IQUB (ENSCJPG00005012108) #34 NDUFA5 (ENSCJPG00005012109) #32 ASB15 (ENSCJPG00005012110) #31 LMOD2 (ENSCJPG00005012111) #30 WASL (ENSCJPG00005012112) #29 ENSCJPG00005012113 ##28 SPAM1 (ENSCJPG00005012116) #27 African ostrich MODERN SPECIES 1021 MAPK11 (ENSSCUG00000013226) ENSSCUG00000013222 HDAC10 (ENSSCUG00000013217) TUBGCP6 (ENSSCUG00000013212) SELENOO (ENSSCUG00000013208) TRABD (ENSSCUG00000013203) ENSSCUG00000013198 ENSSCUG00000013196 PANX2 (ENSSCUG00000013194) MOV10L1 (ENSSCUG00000013193) MLC1 (ENSSCUG00000013190) ENSSCUG00000013189 IL17REL (ENSSCUG00000013186) ENSSCUG00000013183 ZNF800 (ENSSCUG00000013182) #20 GRM8 (ENSSCUG00000013180) #22 Australian saltwater crocodile MODERN SPECIES 49 IL17REL (ENSCPRG00005011348) TTLL8 (ENSCPRG00005011325) MLC1 (ENSCPRG00005011313) MOV10L1 (ENSCPRG00005011288) PANX2 (ENSCPRG00005011274) TRABD (ENSCPRG00005011268) SELENOO (ENSCPRG00005011259) TUBGCP6 (ENSCPRG00005011078) HDAC10 (ENSCPRG00005011050) ENSCPRG00005011047 MAPK12 (ENSCPRG00005011016) MAPK11 (ENSCPRG00005011004) PLXNB2 (ENSCPRG00005010972) ZNF800 (ENSCPRG00005010958) #20 ENSCPRG00005010956 GRM8 (ENSCPRG00005010952) #22 POT1 (ENSCPRG00005010932) #24 GPR37 (ENSCPRG00005010923) #26 ENSCPRG00005010918 ENSCPRG00005010914 SPAM1 (ENSCPRG00005010900) #27 HYAL4 (ENSCPRG00005010893) #28 ENSCPRG00005010886 ##28 WASL (ENSCPRG00005010885) #29 LMOD2 (ENSCPRG00005010878) #30 ASB15 (ENSCPRG00005010877) #31 NDUFA5 (ENSCPRG00005010869) #32 IQUB (ENSCPRG00005010863) #34 ENSCPRG00005010860 ENSCPRG00005010847 ENSCPRG00005010846 #35 Cryptodira ANCESTRAL SPECIES 11 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Chinese turtle MODERN SPECIES 1049 MOV10L1 (ENSPSIG00000015161) ENSPSIG00000015153 PANX2 (ENSPSIG00000015136) TRABD (ENSPSIG00000015017) SELENOO (ENSPSIG00000014944) ENSPSIG00000014937 ENSPSIG00000014931 HDAC10 (ENSPSIG00000014918) ENSPSIG00000014909 MAPK12 (ENSPSIG00000014289) MAPK11 (ENSPSIG00000013808) ENSPSIG00000001397 PLXNB2 (ENSPSIG00000013624) ENSPSIG00000001375 ZNF800 (ENSPSIG00000013613) #20 GRM8 (ENSPSIG00000013408) #22 POT1 (ENSPSIG00000013374) #24 GPR37 (ENSPSIG00000013352) #26 ENSPSIG00000013325 SPAM1 (ENSPSIG00000013181) #27 ENSPSIG00000013129 ##28 ENSPSIG00000001365 WASL (ENSPSIG00000012603) #29 LMOD2 (ENSPSIG00000012566) #30 ENSPSIG00000001353 ASB15 (ENSPSIG00000012277) #31 NDUFA5 (ENSPSIG00000012270) #32 IQUB (ENSPSIG00000012185) #34 ENSPSIG00000012174 SLC13A1 (ENSPSIG00000011581) #35 CADPS2 (ENSPSIG00000010156) #36 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Testudinidae ANCESTRAL SPECIES 12 ENSGT00940000153394.c.b ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Goode s thornscrub tortoise MODERN SPECIES TTLL8 (ENSGEVG00005020632) MLC1 (ENSGEVG00005020626) MOV10L1 (ENSGEVG00005020619) ENSGEVG00005020611 PANX2 (ENSGEVG00005020606) ENSGEVG00005020597 TRABD (ENSGEVG00005020590) SELENOO (ENSGEVG00005020585) TUBGCP6 (ENSGEVG00005020574) HDAC10 (ENSGEVG00005020563) ENSGEVG00005020552 MAPK12 (ENSGEVG00005020544) MAPK11 (ENSGEVG00005020538) PLXNB2 (ENSGEVG00005020523) ZNF800 (ENSGEVG00005020517) #20 GRM8 (ENSGEVG00005020510) #22 POT1 (ENSGEVG00005020498) #24 GPR37 (ENSGEVG00005020494) #26 ENSGEVG00005020492 SPAM1 (ENSGEVG00005020488) #27 HYAL4 (ENSGEVG00005020484) #28 ENSGEVG00005020478 ##28 WASL (ENSGEVG00005020473) #29 LMOD2 (ENSGEVG00005020470) #30 ASB15 (ENSGEVG00005020468) #31 ENSGEVG00005020466 #32 IQUB (ENSGEVG00005020462) #34 ENSGEVG00005020458 ENSGEVG00005020438 #35 RNF148 (ENSGEVG00005020434) #37 CADPS2 (ENSGEVG00005020416) #36 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1887 ENSCABG00000023087 #22 Abingdon island giant tortoise MODERN SPECIES 1799 ENSCABG00000011774 #22 Emydidae ANCESTRAL SPECIES 10 ENSGT00940000162605 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000163382.a #37 ENSGT00590000083094.a.b #36 Three-toed box turtle MODERN SPECIES 28 TTLL8 (ENSTMTG00000004450) MLC1 (ENSTMTG00000004475) MOV10L1 (ENSTMTG00000004565) ENSTMTG00000004621 PANX2 (ENSTMTG00000004651) ENSTMTG00000004682 TRABD (ENSTMTG00000004846) SELENOO (ENSTMTG00000004874) TUBGCP6 (ENSTMTG00000004902) HDAC10 (ENSTMTG00000004962) ENSTMTG00000005042 MAPK12 (ENSTMTG00000005064) MAPK11 (ENSTMTG00000005099) PLXNB2 (ENSTMTG00000005123) ZNF800 (ENSTMTG00000005214) #20 GRM8 (ENSTMTG00000005228) #22 POT1 (ENSTMTG00000005284) #24 GPR37 (ENSTMTG00000005457) #26 ENSTMTG00000005471 SPAM1 (ENSTMTG00000005498) #27 HYAL4 (ENSTMTG00000005508) #28 ENSTMTG00000005529 ##28 WASL (ENSTMTG00000005564) #29 LMOD2 (ENSTMTG00000005593) #30 ASB15 (ENSTMTG00000005621) #31 NDUFA5 (ENSTMTG00000005661) #32 IQUB (ENSTMTG00000005679) #34 ENSTMTG00000005720 ENSTMTG00000005746 #35 CADPS2 (ENSTMTG00000005774) #36 ENSTMTG00000005924 painted turtle DUPLICATION painted turtle MODERN SPECIES 7 ENSCPBG00000021301 MLC1 (ENSCPBG00000021296) MOV10L1 (ENSCPBG00000021288) ENSCPBG00000021285 ENSCPBG00000021283 PANX2 (ENSCPBG00000021281) TRABD (ENSCPBG00000021278) SELENOO (ENSCPBG00000021276) ENSCPBG00000021273 ENSCPBG00000021271 HDAC10 (ENSCPBG00000021265) MAPK12 (ENSCPBG00000021260) MAPK11 (ENSCPBG00000021257) PLXNB2 (ENSCPBG00000020835) ZNF800 (ENSCPBG00000020787) #20 ENSCPBG00000020783 #22 ENSCPBG00000020781 #22 ENSCPBG00000020778 POT1 (ENSCPBG00000020770) #24 GPR37 (ENSCPBG00000020768) #26 ENSCPBG00000020766 HYAL4 (ENSCPBG00000020764) #28 ENSCPBG00000020761 ##28 WASL (ENSCPBG00000020695) #29 LMOD2 (ENSCPBG00000020678) #30 ASB15 (ENSCPBG00000020670) #31 NDUFA5 (ENSCPBG00000020662) #32 IQUB (ENSCPBG00000020650) #34 ENSCPBG00000020639 SLC13A1 (ENSCPBG00000020633) #35 RNF148 (ENSCPBG00000020629) #37 painted turtle MODERN SPECIES 7 MLC1 (ENSCPBG00000021296) MOV10L1 (ENSCPBG00000021288) ENSCPBG00000021285 ENSCPBG00000021283 PANX2 (ENSCPBG00000021281) TRABD (ENSCPBG00000021278) SELENOO (ENSCPBG00000021276) ENSCPBG00000021273 ENSCPBG00000021271 HDAC10 (ENSCPBG00000021265) MAPK12 (ENSCPBG00000021260) MAPK11 (ENSCPBG00000021257) PLXNB2 (ENSCPBG00000020835) ZNF800 (ENSCPBG00000020787) #20 ENSCPBG00000020783 #22 ENSCPBG00000020781 #22 ENSCPBG00000020778 POT1 (ENSCPBG00000020770) #24 GPR37 (ENSCPBG00000020768) #26 ENSCPBG00000020766 HYAL4 (ENSCPBG00000020764) #28 ENSCPBG00000020761 ##28 WASL (ENSCPBG00000020695) #29 LMOD2 (ENSCPBG00000020678) #30 ASB15 (ENSCPBG00000020670) #31 NDUFA5 (ENSCPBG00000020662) #32 IQUB (ENSCPBG00000020650) #34 ENSCPBG00000020639 SLC13A1 (ENSCPBG00000020633) #35 RNF148 (ENSCPBG00000020629) #37 CADPS2 (ENSCPBG00000008933) #36 Lepidosauria ANCESTRAL SPECIES 31 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00940000165940 ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164395.a.b ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000163382.b #37 ENSGT00990000210432 ENSGT00940000163382.a #37 Laterata ANCESTRAL SPECIES 6 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164395.a.b ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00990000210432 ENSGT00940000163382.a #37 ENSGT00940000159477 Common wall lizard MODERN SPECIES 1 MAPK12 (ENSPMRG00000013340) ENSPMRG00000013356 ENSPMRG00000013361 HDAC10 (ENSPMRG00000013367) TUBGCP6 (ENSPMRG00000013377) ENSPMRG00000013383 SELENOO (ENSPMRG00000013389) ENSPMRG00000013402 PANX2 (ENSPMRG00000013416) MOV10L1 (ENSPMRG00000013433) MLC1 (ENSPMRG00000013450) ENSPMRG00000013453 ENSPMRG00000013456 ENSPMRG00000013460 ZNF800 (ENSPMRG00000013462) #20 GRM8 (ENSPMRG00000013466) #22 POT1 (ENSPMRG00000013479) #24 GPR37 (ENSPMRG00000013505) #26 ENSPMRG00000013509 HYAL4 (ENSPMRG00000013514) #28 ENSPMRG00000013528 ##28 ENSPMRG00000013556 LMOD2 (ENSPMRG00000013576) #30 ASB15 (ENSPMRG00000013589) #31 NDUFA5 (ENSPMRG00000013603) #32 IQUB (ENSPMRG00000013610) #34 ENSPMRG00000013616 SLC13A1 (ENSPMRG00000013622) #35 CADPS2 (ENSPMRG00000013638) #36 ENSPMRG00000013722 RNF148 (ENSPMRG00000013725) #37 Argentine black and white tegu MODERN SPECIES 15 MLC1 (ENSSMRG00000010870) MOV10L1 (ENSSMRG00000010872) PANX2 (ENSSMRG00000010902) ENSSMRG00000010903 TRABD (ENSSMRG00000010907) SELENOO (ENSSMRG00000010910) TUBGCP6 (ENSSMRG00000010918) ENSSMRG00000011006 ENSSMRG00000011008 ENSSMRG00000011012 MAPK12 (ENSSMRG00000011017) ENSSMRG00000011022 PLXNB2 (ENSSMRG00000011052) ZNF800 (ENSSMRG00000011917) #20 ENSSMRG00000011918 GRM8 (ENSSMRG00000011952) #22 POT1 (ENSSMRG00000012031) #24 GPR37 (ENSSMRG00000012032) #26 HYAL4 (ENSSMRG00000012091) #28 ENSSMRG00000012095 ##28 WASL (ENSSMRG00000012118) #29 LMOD2 (ENSSMRG00000012119) #30 ASB15 (ENSSMRG00000012120) #31 NDUFA5 (ENSSMRG00000012122) #32 IQUB (ENSSMRG00000012124) #34 ENSSMRG00000012131 ENSSMRG00000012149 #35 CADPS2 (ENSSMRG00000012230) #36 RNF148 (ENSSMRG00000012235) #37 FEZF1 (ENSSMRG00000012236) AASS (ENSSMRG00000012237) Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164395.a.b ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000163382.b #37 ENSGT00940000163382.a #37 ENSGT00940000159477 Lizard DUPLICATION Lizard MODERN SPECIES 4 PANX2 (ENSACAG00000002347) ENSACAG00000027919 TRABD (ENSACAG00000002304) SELENOO (ENSACAG00000002256) ENSACAG00000037139 TUBGCP6 (ENSACAG00000002182) HDAC10 (ENSACAG00000002041) ENSACAG00000029666 ENSACAG00000002027 MAPK12 (ENSACAG00000001919) MAPK11 (ENSACAG00000001806) PLXNB2 (ENSACAG00000001572) ENSACAG00000037745 ENSACAG00000001512 ZNF800 (ENSACAG00000045408) #20 ENSACAG00000043441 #22 GRM8 (ENSACAG00000001352) #22 ENSACAG00000036122 ENSACAG00000040401 POT1 (ENSACAG00000001301) #24 GPR37 (ENSACAG00000001286) #26 ENSACAG00000044851 ENSACAG00000035296 HYAL4 (ENSACAG00000027063) #28 ENSACAG00000001202 ##28 ENSACAG00000036969 ##28 ENSACAG00000001204 ##28 WASL (ENSACAG00000000979) #29 LMOD2 (ENSACAG00000000951) #30 ASB15 (ENSACAG00000000851) #31 NDUFA5 (ENSACAG00000038064) #32 Lizard MODERN SPECIES 4 ENSACAG00000027919 TRABD (ENSACAG00000002304) SELENOO (ENSACAG00000002256) ENSACAG00000037139 TUBGCP6 (ENSACAG00000002182) HDAC10 (ENSACAG00000002041) ENSACAG00000029666 ENSACAG00000002027 MAPK12 (ENSACAG00000001919) MAPK11 (ENSACAG00000001806) PLXNB2 (ENSACAG00000001572) ENSACAG00000037745 ENSACAG00000001512 ZNF800 (ENSACAG00000045408) #20 ENSACAG00000043441 #22 GRM8 (ENSACAG00000001352) #22 ENSACAG00000036122 ENSACAG00000040401 POT1 (ENSACAG00000001301) #24 GPR37 (ENSACAG00000001286) #26 ENSACAG00000044851 ENSACAG00000035296 HYAL4 (ENSACAG00000027063) #28 ENSACAG00000001202 ##28 ENSACAG00000036969 ##28 ENSACAG00000001204 ##28 WASL (ENSACAG00000000979) #29 LMOD2 (ENSACAG00000000951) #30 ASB15 (ENSACAG00000000851) #31 NDUFA5 (ENSACAG00000038064) #32 IQUB (ENSACAG00000000747) #34 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000160071 ENSGT00940000153394.c.b ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C Indian cobra MODERN SPECIES 10 PIM3 (ENSNNAG00000004133) TTLL8 (ENSNNAG00000004149) MLC1 (ENSNNAG00000004203) MOV10L1 (ENSNNAG00000004541) PANX2 (ENSNNAG00000004610) ENSNNAG00000004659 TRABD (ENSNNAG00000004805) SELENOO (ENSNNAG00000004830) TUBGCP6 (ENSNNAG00000005082) HDAC10 (ENSNNAG00000005222) MAPK12 (ENSNNAG00000005298) MAPK11 (ENSNNAG00000005400) ENSNNAG00000005478 ENSNNAG00000005528 ZNF800 (ENSNNAG00000005567) #20 GRM8 (ENSNNAG00000005629) #22 ENSNNAG00000005657 POT1 (ENSNNAG00000005677) #24 GPR37 (ENSNNAG00000005729) #26 HYAL4 (ENSNNAG00000005787) #28 ENSNNAG00000005815 ##28 WASL (ENSNNAG00000005834) #29 LMOD2 (ENSNNAG00000005853) #30 ASB15 (ENSNNAG00000005917) #31 NDUFA5 (ENSNNAG00000006009) #32 IQUB (ENSNNAG00000006025) #34 ENSNNAG00000006069 ENSNNAG00000006096 #35 CADPS2 (ENSNNAG00000006131) #36 ENSNNAG00000006247 #37 ENSNNAG00000006263 Elapidae_a ANCESTRAL SPECIES 61 ENSGT00940000160071 ENSGT00940000153394.c.b ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C Blue-lipped sea krait MODERN SPECIES 3423 ENSLLTG00000005455 #22 Acanthophiinae ANCESTRAL SPECIES 57 ENSGT00940000160071 ENSGT00940000153394.c.b ENSGT00940000162265 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C Eastern brown snake MODERN SPECIES 66 PIM3 (ENSPTXG00000006035) ENSPTXG00000006034 ENSPTXG00000006033 MLC1 (ENSPTXG00000006032) ENSPTXG00000006030 PANX2 (ENSPTXG00000006029) ENSPTXG00000006027 TRABD (ENSPTXG00000006026) SELENOO (ENSPTXG00000006025) TUBGCP6 (ENSPTXG00000006023) HDAC10 (ENSPTXG00000006022) MAPK12 (ENSPTXG00000006021) MAPK11 (ENSPTXG00000006020) PLXNB2 (ENSPTXG00000006019) ZNF800 (ENSPTXG00000006017) #20 GRM8 (ENSPTXG00000006014) #22 POT1 (ENSPTXG00000006012) #24 GPR37 (ENSPTXG00000006011) #26 HYAL4 (ENSPTXG00000006010) #28 ENSPTXG00000006008 ##28 WASL (ENSPTXG00000005981) #29 LMOD2 (ENSPTXG00000005980) #30 ASB15 (ENSPTXG00000005979) #31 NDUFA5 (ENSPTXG00000005978) #32 IQUB (ENSPTXG00000005977) #34 SLC13A1 (ENSPTXG00000005976) #35 ENSPTXG00000005975 #37 ENSPTXG00000005974 #37 ENSPTXG00000005973 CADPS2 (ENSPTXG00000005972) #36 FEZF1 (ENSPTXG00000005971) Mainland tiger snake MODERN SPECIES 26 MLC1 (ENSNSUG00000010611) MOV10L1 (ENSNSUG00000010613) PANX2 (ENSNSUG00000010615) ENSNSUG00000010616 TRABD (ENSNSUG00000010621) SELENOO (ENSNSUG00000010622) TUBGCP6 (ENSNSUG00000010624) HDAC10 (ENSNSUG00000010640) ENSNSUG00000010712 MAPK12 (ENSNSUG00000010715) ENSNSUG00000010723 ENSNSUG00000010728 PLXNB2 (ENSNSUG00000010744) ENSNSUG00000011392 ZNF800 (ENSNSUG00000011396) #20 GRM8 (ENSNSUG00000011398) #22 POT1 (ENSNSUG00000011404) #24 GPR37 (ENSNSUG00000011414) #26 HYAL4 (ENSNSUG00000011415) #28 ENSNSUG00000011419 ##28 WASL (ENSNSUG00000011420) #29 ENSNSUG00000011421 #30 ASB15 (ENSNSUG00000011422) #31 NDUFA5 (ENSNSUG00000011424) #32 IQUB (ENSNSUG00000011425) #34 ENSNSUG00000011430 SLC13A1 (ENSNSUG00000011433) #35 CADPS2 (ENSNSUG00000011811) #36 ENSNSUG00000011825 #37 ENSNSUG00000011827 #37 FEZF1 (ENSNSUG00000011831) Anura ANCESTRAL SPECIES 5 ENSGT00940000162605 ENSGT00390000015442 ENSGT00940000160150 ENSGT00940000153972.C ENSGT00940000165434 ENSGT00390000009067 ENSGT00390000005508.a ENSGT00940000164836 ENSGT00940000157810 ENSGT00940000160061 ENSGT00940000164657 ENSGT00940000156189 ENSGT00940000160790 ENSGT01020000230394.e.a.a.a ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00940000165940 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 Frog MODERN SPECIES 3 mov10l1 (ENSXETG00000022273) ENSXETG00000043665 qrich1l (ENSXETG00000022272) XB5867320 [provisional:tspan7] (ENSXETG00000032143) panx2 (ENSXETG00000033083) selenoo (ENSXETG00000000399) tubgcp6 (ENSXETG00000022264) hdac10 (ENSXETG00000031474) szl (ENSXETG00000022260) mapk12 (ENSXETG00000000436) ENSXETG00000037699 mapk11 (ENSXETG00000022254) plxnb2 (ENSXETG00000022253) znf800 (ENSXETG00000022250) #20 ENSXETG00000040262 grm8 (ENSXETG00000021218) #22 pot1 (ENSXETG00000021222) #24 gpr37 (ENSXETG00000022118) #26 TMEM229A (ENSXETG00000045743) arl10b (ENSXETG00000022124) hyal4 (ENSXETG00000038674) ##28 wasl (ENSXETG00000022129) #29 lmod2 (ENSXETG00000022132) #30 asb15 (ENSXETG00000022136) #31 ndufa5 (ENSXETG00000038917) #32 iqub (ENSXETG00000022138) #34 atp6ap1.1 (ENSXETG00000038933) slc13a1 (ENSXETG00000022751) #35 cadps2 (ENSXETG00000022749) #36 fezf1 (ENSXETG00000022748) aass (ENSXETG00000022747) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000007943 TRABD (ENSLLEG00000007855) SELENOO (ENSLLEG00000007715) ENSLLEG00000007684 TUBGCP6 (ENSLLEG00000007556) HDAC10 (ENSLLEG00000007489) ENSLLEG00000007030 MAPK12 (ENSLLEG00000005121) MAPK11 (ENSLLEG00000004916) ENSLLEG00000004905 PLXNB2 (ENSLLEG00000004825) ENSLLEG00000004773 ENSLLEG00000004762 ENSLLEG00000004755 ENSLLEG00000004749 GRM8 (ENSLLEG00000016596) #22 POT1 (ENSLLEG00000016150) #24 GPR37 (ENSLLEG00000016100) #26 TMEM229A (ENSLLEG00000016039) ENSLLEG00000015993 ENSLLEG00000015936 ##28 ENSLLEG00000014119 ##28 ENSLLEG00000013864 LMOD2 (ENSLLEG00000013838) #30 ENSLLEG00000013751 ENSLLEG00000013725 ASB15 (ENSLLEG00000013660) #31 NDUFA5 (ENSLLEG00000013610) #32 IQUB (ENSLLEG00000013544) #34 ENSLLEG00000013515 ENSLLEG00000013445 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 424 ENSLACG00000017034 TRABD (ENSLACG00000016939) SELENOO (ENSLACG00000016852) ENSLACG00000016758 ENSLACG00000016680 TUBGCP6 (ENSLACG00000016537) HDAC10 (ENSLACG00000016386) szl (ENSLACG00000016352) ENSLACG00000016263 ENSLACG00000016060 MAPK11 (ENSLACG00000015757) PLXNB2 (ENSLACG00000015264) ZNF800 (ENSLACG00000012830) #20 ENSLACG00000012247 #22 ENSLACG00000008167 #22 ENSLACG00000007041 #22 Coelacanth MODERN SPECIES 424 PANX2 (ENSLACG00000017211) ENSLACG00000017078 ENSLACG00000017034 TRABD (ENSLACG00000016939) SELENOO (ENSLACG00000016852) ENSLACG00000016758 ENSLACG00000016680 TUBGCP6 (ENSLACG00000016537) HDAC10 (ENSLACG00000016386) szl (ENSLACG00000016352) ENSLACG00000016263 ENSLACG00000016060 MAPK11 (ENSLACG00000015757) PLXNB2 (ENSLACG00000015264) ZNF800 (ENSLACG00000012830) #20 ENSLACG00000012247 #22 ENSLACG00000008167 #22 ENSLACG00000007041 #22 Coelacanth MODERN SPECIES 424 ENSLACG00000017078 ENSLACG00000017034 TRABD (ENSLACG00000016939) SELENOO (ENSLACG00000016852) ENSLACG00000016758 ENSLACG00000016680 TUBGCP6 (ENSLACG00000016537) HDAC10 (ENSLACG00000016386) szl (ENSLACG00000016352) ENSLACG00000016263 ENSLACG00000016060 MAPK11 (ENSLACG00000015757) PLXNB2 (ENSLACG00000015264) ZNF800 (ENSLACG00000012830) #20 ENSLACG00000012247 #22 ENSLACG00000008167 #22 ENSLACG00000007041 #22 Actinopterygii ANCESTRAL SPECIES 90 ENSGT00940000156189 ENSGT00940000160790 ENSGT00550000074907 ENSGT00940000166951 ENSGT00390000004586 ENSGT01050000244841.A.b.b.a ENSGT00390000011239 ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000161245 ENSGT00940000158612 ENSGT00940000154487.B ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00940000166287 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Reedfish MODERN SPECIES slc26a4 (ENSECRG00000003515) bcap29 (ENSECRG00000003504) dus4l (ENSECRG00000003491) ENSECRG00000003480 COG5 (ENSECRG00000003463) hbp1 (ENSECRG00000003450) PRKAR2B (ENSECRG00000003359) pik3cg (ENSECRG00000003338) NAMPT (ENSECRG00000003323) SYPL1 (ENSECRG00000003308) CDHR3 (ENSECRG00000003289) ATXN7L1 (ENSECRG00000003273) EFCAB10 (ENSECRG00000003263) znf800a (ENSECRG00000003256) #20 ENSECRG00000003238 ##22 grm8b (ENSECRG00000003042) #22 pot1 (ENSECRG00000002972) #24 gpr37b (ENSECRG00000002942) #26 TMEM229A (ENSECRG00000002931) ENSECRG00000002918 SPAM1 (ENSECRG00000002908) #27 ENSECRG00000002772 #27 spam1 (ENSECRG00000002441) #27 HYAL4 (ENSECRG00000002309) #28 hyal6 (ENSECRG00000001758) ##28 waslb (ENSECRG00000001674) #29 lmod2a (ENSECRG00000001647) #30 asb15b (ENSECRG00000001629) #31 ndufa5 (ENSECRG00000001619) #32 IQUB (ENSECRG00000001604) #34 IQUB (ENSECRG00000001496) #34 Neopterygii ANCESTRAL SPECIES 149 ENSGT00550000074907 ENSGT00940000166951 ENSGT00390000004586 ENSGT01050000244841.A.b.b.a ENSGT00390000011239 ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000161245 ENSGT00940000158612 ENSGT00940000154487.B ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a #29 ENSGT00940000156567 #30 ENSGT00940000157073 #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Spotted gar MODERN SPECIES 674 slc26a4 (ENSLOCG00000015808) bcap29 (ENSLOCG00000015812) dus4l (ENSLOCG00000015815) COG5 (ENSLOCG00000015817) gpr22a (ENSLOCG00000017904) hbp1 (ENSLOCG00000015822) PRKAR2B (ENSLOCG00000015827) pik3cg (ENSLOCG00000015829) ENSLOCG00000015833 NAMPT (ENSLOCG00000015835) SYPL1 (ENSLOCG00000015838) CDHR3 (ENSLOCG00000015841) ATXN7L1 (ENSLOCG00000015842) EFCAB10 (ENSLOCG00000015844) znf800a (ENSLOCG00000015846) #20 grm8b (ENSLOCG00000015847) #22 pot1 (ENSLOCG00000015853) #24 gpr37b (ENSLOCG00000015856) #26 TMEM229A (ENSLOCG00000017905) SPAM1 (ENSLOCG00000015857) #27 spam1 (ENSLOCG00000015858) #27 HYAL4 (ENSLOCG00000015859) #28 hyal6 (ENSLOCG00000015861) ##28 waslb (ENSLOCG00000015863) #29 lmod2a (ENSLOCG00000015865) #30 asb15b (ENSLOCG00000015866) #31 ndufa5 (ENSLOCG00000015870) #32 IQUB (ENSLOCG00000015872) #34 slc13a1 (ENSLOCG00000015873) #35 CADPS2 (ENSLOCG00000015875) #36 fezf1 (ENSLOCG00000015885) Osteoglossocephalai ANCESTRAL SPECIES 134 ENSGT00390000011863.d.a.a ENSGT01050000244841.A.b.b.a ENSGT00390000004586 ENSGT00390000011239.j ENSGT01030000234518.A.b ENSGT00390000011239.i ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000164338 ENSGT00940000158612 ENSGT00940000154487.B ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567 #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000157073.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 Osteoglossiformes ANCESTRAL SPECIES 195 ENSGT00940000156628.e ENSGT01080000257336.b.e.b.a.a.a ENSGT00390000011863.d.b ENSGT00550000074907 ENSGT00940000166951 ENSGT00390000004586 ENSGT00390000011239.j ENSGT00940000158160.l ENSGT00940000156858 ENSGT00940000153456.b.a.hb.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612.e ENSGT00940000154487.B ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b #22 ENSGT00940000168532 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b #26 ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000157073.a.c #31 ENSGT00390000008099 #32 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.i #36 ENSGT00940000159477.a ENSGT00390000013249 ENSGT00940000155529.C.h Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 13 aebp2 (ENSSFOG00015005825) PDE3A (ENSSFOG00015005853) slco1c1 (ENSSFOG00015005898) BCAP29 (ENSSFOG00015005923) dus4l (ENSSFOG00015005943) COG5 (ENSSFOG00015005970) ENSSFOG00015006042 PRKAR2B (ENSSFOG00015006059) pik3cg (ENSSFOG00015006087) NAMPT (ENSSFOG00015006148) SYPL1 (ENSSFOG00015027879) ENSSFOG00015006200 ATXN7L1 (ENSSFOG00015006213) EFCAB10 (ENSSFOG00015006239) znf800b (ENSSFOG00015032905) #20 GRM8 (ENSSFOG00015011385) #22 GPR37 (ENSSFOG00015028102) #26 ENSSFOG00015006363 TMEM229A (ENSSFOG00015029281) spam1 (ENSSFOG00015006431) #27 HYAL4 (ENSSFOG00015025610) #28 waslb (ENSSFOG00015006774) #29 lmod2a (ENSSFOG00015025384) #30 ASB15 (ENSSFOG00015027551) #31 ENSSFOG00015025770 ASB15 (ENSSFOG00015006838) #31 slc13a1 (ENSSFOG00015006869) #35 CADPS2 (ENSSFOG00015006981) #36 fezf1 (ENSSFOG00015007044) PTPRZ1 (ENSSFOG00015007075) dldh (ENSSFOG00015007242) Asian bonytongue MODERN SPECIES 11 ENSSFOG00015010821 guca1a (ENSSFOG00015010833) hcls1 (ENSSFOG00015010854) ENSSFOG00015010907 plekha5 (ENSSFOG00015010964) AEBP2 (ENSSFOG00015011046) PDE3A (ENSSFOG00015011079) bcap29 (ENSSFOG00015011117) gpr22a (ENSSFOG00015011145) hbp1 (ENSSFOG00015011155) PRKAR2B (ENSSFOG00015011189) NAMPT (ENSSFOG00015011238) ENSSFOG00015026070 ENSSFOG00015011283 znf800a (ENSSFOG00015011351) #20 GRM8 (ENSSFOG00015006290) #22 ENSSFOG00015011426 pot1 (ENSSFOG00015011445) #24 GPR37 (ENSSFOG00015024804) #26 spam1 (ENSSFOG00015011634) #27 HYAL4 (ENSSFOG00015011646) #28 hyal6 (ENSSFOG00015011649) ##28 wasla (ENSSFOG00015011660) #29 ASB15 (ENSSFOG00015011697) #31 ASB15 (ENSSFOG00015011729) #31 ndufa5 (ENSSFOG00015011772) #32 IQUB (ENSSFOG00015011787) #34 CADPS2 (ENSSFOG00015011827) #36 fezf1 (ENSSFOG00015011943) aass (ENSSFOG00015012006) PTPRZ1 (ENSSFOG00015012128) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 109 plekha5 (ENSPKIG00000016659) aebp2 (ENSPKIG00000016601) PDE3A (ENSPKIG00000016563) slco1c1 (ENSPKIG00000016479) dus4l (ENSPKIG00000016429) ENSPKIG00000016399 COG5 (ENSPKIG00000016318) HBP1 (ENSPKIG00000016269) PRKAR2B (ENSPKIG00000016242) pik3cg (ENSPKIG00000016209) NAMPT (ENSPKIG00000016179) SYPL1 (ENSPKIG00000016157) ATXN7L1 (ENSPKIG00000016122) EFCAB10 (ENSPKIG00000016101) ENSPKIG00000016075 #20 GRM8 (ENSPKIG00000016030) #22 GPR37 (ENSPKIG00000015989) #26 TMEM229A (ENSPKIG00000015974) spam1 (ENSPKIG00000015917) #27 HYAL4 (ENSPKIG00000015774) #28 ENSPKIG00000015696 ENSPKIG00000015680 #29 lmod2a (ENSPKIG00000015654) #30 ASB15 (ENSPKIG00000015628) #31 slc13a1 (ENSPKIG00000015571) #35 CADPS2 (ENSPKIG00000015506) #36 fezf1 (ENSPKIG00000015478) ENSPKIG00000015450 ENSPKIG00000015400 dldh (ENSPKIG00000015348) lamb1a (ENSPKIG00000015245) P. kingsleyae MODERN SPECIES 522 hbp1 (ENSPKIG00000016967) PRKAR2B (ENSPKIG00000017010) NAMPT (ENSPKIG00000017062) SYPL1 (ENSPKIG00000017097) ENSPKIG00000017106 ENSPKIG00000017128 znf800a (ENSPKIG00000017172) #20 ENSPKIG00000017223 #22 ENSPKIG00000017283 ENSPKIG00000017302 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.bb #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.bb #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.bb #22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.bb #22 Huchen MODERN SPECIES 7643 ENSHHUG00000007156 #22 ENSHHUG00000007151 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 262 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Euteleosteomorpha ANCESTRAL SPECIES 182 ENSGT00940000159839.d.b ENSGT00940000154189.B ENSGT00940000158686 ENSGT00390000010968.a ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 Acanthomorphata ANCESTRAL SPECIES 84 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Euacanthomorphacea ANCESTRAL SPECIES 38 ENSGT00940000154189.B ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Percomorphaceae ANCESTRAL SPECIES 31 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000162463 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Tiger tail seahorse MODERN SPECIES 311 ENSHCOG00000011142 ENSHCOG00000011117 ENSHCOG00000011082 BET1L (ENSHCOG00000011032) deaf1 (ENSHCOG00000011027) drd4a (ENSHCOG00000011014) GRAMD4 (ENSHCOG00000010992) ENSHCOG00000010914 CERK (ENSHCOG00000010899) ENSHCOG00000010845 TAFA5 (ENSHCOG00000010283) ENSHCOG00000010258 ftsj1 (ENSHCOG00000010145) ENSHCOG00000010106 acot19 (ENSHCOG00000010101) grm8b (ENSHCOG00000010089) #22 ENSHCOG00000010045 pot1 (ENSHCOG00000010021) #24 ENSHCOG00000000311 #27 HYAL4 (ENSHCOG00000009889) #28 hyal6 (ENSHCOG00000009783) ##28 ENSHCOG00000009768 #34 ENSHCOG00000009744 ENSHCOG00000009738 #31 slc13a1 (ENSHCOG00000000299) #35 CADPS2 (ENSHCOG00000009666) #36 ENSHCOG00000009607 #36 ENSHCOG00000009589 fezf1 (ENSHCOG00000009567) aass (ENSHCOG00000009548) tnnt3a (ENSHCOG00000009452) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Pomacentridae ANCESTRAL SPECIES 68 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Pomacentridae_A ANCESTRAL SPECIES 91 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Amphiprion ANCESTRAL SPECIES 115 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Clown anemonefish MODERN SPECIES 1909 grm8b (ENSAOCG00000023748) #22 ENSAOCG00000023735 #24 ENSAOCG00000001727 Orange clownfish MODERN SPECIES 18 ENSAPEG00000018615 KLHL25 (ENSAPEG00000018584) ENSAPEG00000018532 ska1 (ENSAPEG00000018470) ENSAPEG00000018443 ENSAPEG00000018376 NTRK3 (ENSAPEG00000018302) pard6a (ENSAPEG00000018193) ENSAPEG00000018175 gal (ENSAPEG00000018157) cfdp1 (ENSAPEG00000018117) bcar1 (ENSAPEG00000018003) lrp5 (ENSAPEG00000017845) ENSAPEG00000017803 cbr1 (ENSAPEG00000017516) grm8b (ENSAPEG00000017454) #22 pot1 (ENSAPEG00000017371) #24 ENSAPEG00000017340 GPR37 (ENSAPEG00000017332) #26 SPAM1 (ENSAPEG00000017286) #27 ENSAPEG00000017274 #27 HYAL4 (ENSAPEG00000017263) #28 hyal6 (ENSAPEG00000017254) ##28 ENSAPEG00000017239 wasla (ENSAPEG00000017207) #29 ENSAPEG00000017189 #30 ENSAPEG00000017179 #31 ASB15 (ENSAPEG00000017102) #31 IQUB (ENSAPEG00000016998) #34 slc13a1 (ENSAPEG00000016967) #35 ENSAPEG00000016930 Bicolor damselfish MODERN SPECIES 1030 grm8b (ENSSPAG00000003176) #22 ENSSPAG00000003158 #24 Cichlidae ANCESTRAL SPECIES 74 ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00950000183211.a.a.b ENSGT00940000155645.i.a ENSGT00940000160936 ENSGT00940000166216 ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000165190.B ENSGT00940000157182.g.a Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00950000183211.a.a.b ENSGT00940000155645.i.a ENSGT00940000160936 ENSGT00940000166216 ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000165190.B ENSGT00940000157182.g.a Haplochromini ANCESTRAL SPECIES ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00950000183211.a.a.b ENSGT00940000155645.i.a ENSGT00940000160936 ENSGT00940000166216 ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000165190.B ENSGT00940000157182.g.a Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00950000183211.a.a.b ENSGT00940000155645.i.a ENSGT00940000160936 ENSGT00940000166216 ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000165190.B ENSGT00940000157182.g.a Haplochromini_B ANCESTRAL SPECIES 20 ENSGT00390000010968.a ENSGT00390000017767.a.b ENSGT00940000160974.b.c ENSGT00940000159701 ENSGT00940000160208 ENSGT00940000154527.a.a.b.b ENSGT00940000163878 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00950000183211.a.a.b ENSGT00940000155645.i.a ENSGT00940000160936 ENSGT00940000166216 ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000165190.B ENSGT00940000157182.g.a Eastern happy MODERN SPECIES 19 drd4a (ENSACLG00000013283) deaf1 (ENSACLG00000013739) BET1L (ENSACLG00000013748) ENSACLG00000013755 ENSACLG00000013787 CERK (ENSACLG00000013822) ENSACLG00000013895 ENSACLG00000013947 ENSACLG00000013955 ENSACLG00000013971 brd1b (ENSACLG00000014082) ftsj1 (ENSACLG00000014226) ENSACLG00000014257 ENSACLG00000014261 acot19 (ENSACLG00000014264) grm8b (ENSACLG00000014300) #22 ENSACLG00000014363 ENSACLG00000014503 pot1 (ENSACLG00000014509) #24 GPR37 (ENSACLG00000014572) #26 SPAM1 (ENSACLG00000014584) #27 ENSACLG00000014613 #27 HYAL4 (ENSACLG00000014630) #28 hyal6 (ENSACLG00000014640) ##28 wasla (ENSACLG00000014652) #29 ENSACLG00000014747 pard6a (ENSACLG00000014754) NTRK3 (ENSACLG00000014805) ENSACLG00000014900 ska1 (ENSACLG00000014957) ENSACLG00000014996 Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005022531 GRAMD4 (ENSMZEG00005022537) drd4a (ENSMZEG00005022552) deaf1 (ENSMZEG00005022557) BET1L (ENSMZEG00005022558) ENSMZEG00005022564 ENSMZEG00005022567 CERK (ENSMZEG00005022570) ENSMZEG00005022574 TAFA5 (ENSMZEG00005022577) brd1b (ENSMZEG00005022580) ftsj1 (ENSMZEG00005022583) ENSMZEG00005022587 ENSMZEG00005022591 acot19 (ENSMZEG00005022592) grm8b (ENSMZEG00005022595) #22 ENSMZEG00005022598 pot1 (ENSMZEG00005022602) #24 GPR37 (ENSMZEG00005022606) #26 SPAM1 (ENSMZEG00005022609) #27 ENSMZEG00005022619 #27 HYAL4 (ENSMZEG00005022645) #28 hyal6 (ENSMZEG00005022647) ##28 wasla (ENSMZEG00005022653) #29 ENSMZEG00005022660 pard6a (ENSMZEG00005022661) NTRK3 (ENSMZEG00005022664) ENSMZEG00005022669 ska1 (ENSMZEG00005022685) ENSMZEG00005022692 KLHL25 (ENSMZEG00005022697) P. nyererei MODERN SPECIES 496 ENSPNYG00000011512 ENSPNYG00000011491 ENSPNYG00000011475 drd4a (ENSPNYG00000011441) deaf1 (ENSPNYG00000011409) BET1L (ENSPNYG00000011390) ENSPNYG00000011316 CERK (ENSPNYG00000011298) ENSPNYG00000011240 TAFA5 (ENSPNYG00000011208) brd1b (ENSPNYG00000011154) ftsj1 (ENSPNYG00000011144) ENSPNYG00000011116 ENSPNYG00000011096 acot19 (ENSPNYG00000011080) grm8b (ENSPNYG00000011049) #22 pot1 (ENSPNYG00000011017) #24 GPR37 (ENSPNYG00000010995) #26 SPAM1 (ENSPNYG00000010881) #27 ENSPNYG00000010633 #27 HYAL4 (ENSPNYG00000010593) #28 hyal6 (ENSPNYG00000010576) ##28 wasla (ENSPNYG00000010534) #29 pard6a (ENSPNYG00000010489) NTRK3 (ENSPNYG00000010432) ENSPNYG00000010306 ENSPNYG00000010265 Burton s mouthbrooder MODERN SPECIES 1020 grm8b (ENSHBUG00000010707) #22 Lyretail cichlid MODERN SPECIES 293 ENSNBRG00000012755 GRAMD4 (ENSNBRG00000012720) ENSNBRG00000012711 drd4a (ENSNBRG00000012659) deaf1 (ENSNBRG00000012631) BET1L (ENSNBRG00000012625) ENSNBRG00000012572 ENSNBRG00000012562 ENSNBRG00000012515 TAFA5 (ENSNBRG00000012501) brd1b (ENSNBRG00000012492) ftsj1 (ENSNBRG00000012481) ENSNBRG00000012476 ENSNBRG00000012457 acot19 (ENSNBRG00000012449) grm8b (ENSNBRG00000012416) #22 pot1 (ENSNBRG00000012340) #24 GPR37 (ENSNBRG00000012324) #26 SPAM1 (ENSNBRG00000012290) #27 ENSNBRG00000012128 #27 HYAL4 (ENSNBRG00000012103) #28 hyal6 (ENSNBRG00000012086) ##28 wasla (ENSNBRG00000012060) #29 pard6a (ENSNBRG00000012021) ENSNBRG00000012005 NTRK3 (ENSNBRG00000011960) ENSNBRG00000011919 ska1 (ENSNBRG00000011900) ENSNBRG00000011883 KLHL25 (ENSNBRG00000011855) ENSNBRG00000011823 Nile tilapia MODERN SPECIES 19 ENSONIG00000003919 ENSONIG00000003924 GRAMD4 (ENSONIG00000003927) ENSONIG00000037220 drd4a (ENSONIG00000003934) deaf1 (ENSONIG00000003936) BET1L (ENSONIG00000038573) ENSONIG00000003941 ENSONIG00000003948 CERK (ENSONIG00000038197) ENSONIG00000003953 ENSONIG00000031692 TAFA5 (ENSONIG00000032550) brd1b (ENSONIG00000003960) ENSONIG00000040173 grm8b (ENSONIG00000003982) #22 pot1 (ENSONIG00000003996) #24 GPR37 (ENSONIG00000039457) #26 ENSONIG00000042215 #27 HYAL4 (ENSONIG00000004003) #28 hyal6 (ENSONIG00000004006) ##28 ENSONIG00000004008 ENSONIG00000036957 pard6a (ENSONIG00000004016) NTRK3 (ENSONIG00000004021) ENSONIG00000004029 ENSONIG00000029453 ska1 (ENSONIG00000004038) ENSONIG00000042658 ENSONIG00000037952 KLHL25 (ENSONIG00000004042) Midas cichlid MODERN SPECIES 681 grm8b (ENSACIG00000022439) #22 ENSACIG00000022447 dnase1l4.2 (ENSACIG00000022468) sec13 (ENSACIG00000022500) cand2 (ENSACIG00000022514) PIK3C2B (ENSACIG00000022606) FAM107A (ENSACIG00000022815) mkrn2 (ENSACIG00000022839) MKRN2OS (ENSACIG00000022850) tsen2 (ENSACIG00000022861) rbm39a (ENSACIG00000022910) Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000174622 ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000157073.a.b #31 ENSGT00940000178579 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Oryzias ANCESTRAL SPECIES 63 ENSGT00390000008931 ENSGT00940000157572.a.b ENSGT00940000155997.lb.b ENSGT00950000182959.b.b.e.a ENSGT00940000158477.a.b ENSGT00940000167812 ENSGT00940000153901.a.b.b ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.b ENSGT01030000234588.b.b.b.b.a.a.b ENSGT01030000234588.b.b.b.b.a.b.a.c.b ENSGT01030000234588.b.b.b.b.a.a.a ENSGT01030000234858 ENSGT00940000160892 ENSGT00550000074844 ENSGT00940000161262.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000159477 Oryzias_b ANCESTRAL SPECIES ENSGT00390000011262.e.a ENSGT00390000008931 ENSGT00940000157572.a.b ENSGT00940000155997.lb.b ENSGT00950000182959.b.b.e.a ENSGT00940000158477.a.b ENSGT00940000153901.a.b.b ENSGT00940000167812 ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.b ENSGT01030000234588.b.b.b.b.a.b.a.c.b ENSGT01030000234588.b.b.b.b.a.a.b ENSGT01030000234588.b.b.b.b.a.a.a ENSGT00940000160892 ENSGT00550000074844 ENSGT00940000161262.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00940000159477 ENSGT00940000156476.h ENSGT00390000016075 ENSGT00390000012715.e ENSGT00940000154905.i.b ENSGT00940000157725 ENSGT00940000158007 ENSGT00390000017953.A Indian medaka MODERN SPECIES 606 ENSOMEG00000012718 dldh (ENSOMEG00000012841) CHST1 (ENSOMEG00000012868) grm8b (ENSOMEG00000012896) #22 pot1 (ENSOMEG00000000327) #24 GPR37 (ENSOMEG00000012972) #26 ENSOMEG00000013072 #27 HYAL4 (ENSOMEG00000013154) #28 hyal6 (ENSOMEG00000013166) ##28 IQUB (ENSOMEG00000013218) #34 slc13a1 (ENSOMEG00000013251) #35 fezf1 (ENSOMEG00000013274) scamp2 (ENSOMEG00000013290) mpi (ENSOMEG00000013311) ENSOMEG00000013328 myo9ab (ENSOMEG00000013527) OAZ2 (ENSOMEG00000013601) ppib (ENSOMEG00000013626) adpgk (ENSOMEG00000013647) Javanese ricefish MODERN SPECIES 20 ENSOJAG00000002895 GLG1 (ENSOJAG00000002985) RFWD3 (ENSOJAG00000003173) ENSOJAG00000003382 myod1 (ENSOJAG00000003402) tnnt3a (ENSOJAG00000003454) ENSOJAG00000003546 ENSOJAG00000003563 ENSOJAG00000003599 TNNI2 (ENSOJAG00000003627) TNNI2 (ENSOJAG00000003725) tnni2a.1 (ENSOJAG00000003772) SYT8 (ENSOJAG00000003818) dldh (ENSOJAG00000003976) CHST1 (ENSOJAG00000004747) grm8b (ENSOJAG00000004853) #22 pot1 (ENSOJAG00000005624) #24 GPR37 (ENSOJAG00000005638) #26 ENSOJAG00000005647 #27 HYAL4 (ENSOJAG00000005762) #28 hyal6 (ENSOJAG00000005777) ##28 IQUB (ENSOJAG00000005813) #34 slc13a1 (ENSOJAG00000005938) #35 fezf1 (ENSOJAG00000006167) scamp2 (ENSOJAG00000006200) mpi (ENSOJAG00000006219) ENSOJAG00000006245 myo9ab (ENSOJAG00000006449) OAZ2 (ENSOJAG00000009075) ENSOJAG00000009150 ppib (ENSOJAG00000009196) Oryzias_a ANCESTRAL SPECIES 88 ENSGT01030000234858 ENSGT00940000160892 ENSGT00550000074844 ENSGT00940000161262.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00390000014326 #34 ENSGT01030000234588.b.b.b.b.a.a.a ENSGT01030000234588.b.b.b.b.a.a.b ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.b ENSGT01030000234588.b.b.b.b.a.b.a.c.b ENSGT00940000153901.a.b.b ENSGT00940000167812 ENSGT00940000158477.a.b ENSGT00950000182959.b.b.e.a ENSGT00940000155997.lb.b Japanese Medaka HdrR MODERN SPECIES 20 mphosph6 (ENSORLG00000000232) gpia (ENSORLG00000000249) ENSORLG00000000264 ENSORLG00000028042 ENSORLG00000000271 lamb1a (ENSORLG00000000356) cetp (ENSORLG00000000375) herpud1 (ENSORLG00000000388) slc12a3 (ENSORLG00000000412) ENSORLG00000000419 ENSORLG00000024966 ENSORLG00000024504 ENSORLG00000000450 dldh (ENSORLG00000000461) ENSORLG00000025976 grm8b (ENSORLG00000000478) #22 pot1 (ENSORLG00000000493) #24 GPR37 (ENSORLG00000027795) #26 ENSORLG00000000501 #27 HYAL4 (ENSORLG00000000515) #28 hyal6 (ENSORLG00000000524) ##28 ENSORLG00000000533 #34 tnni2a.1 (ENSORLG00000000545) tnni2a.2 (ENSORLG00000024626) TNNI2 (ENSORLG00000000559) TNNI2 (ENSORLG00000000591) ENSORLG00000024559 ENSORLG00000000599 ENSORLG00000025446 tnnt3a (ENSORLG00000000678) myod1 (ENSORLG00000000694) Chinese medaka MODERN SPECIES 2064 ENSOSIG00000012618 #22 Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000174622 ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000157073.a.b #31 ENSGT00940000178579 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT00940000160625.r.a ENSGT00940000153229.A.a.a.a ENSGT00940000165218.b ENSGT00390000011262.e.a ENSGT00390000008931 ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.p #36 ENSGT00590000083094.a.b.o.a #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A ENSGT00940000157182.g.a NAME_4 ANCESTRAL SPECIES 72 ENSGT00940000160625.r.a ENSGT00940000153229.A.a.a.a ENSGT00940000165218.b ENSGT00390000011262.e.a ENSGT00390000008931 ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000178524 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.p #36 ENSGT00590000083094.a.b.o.a #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A ENSGT00940000157182.g.a Mummichog MODERN SPECIES 2340 grm8b (ENSFHEG00000019955) #22 pot1 (ENSFHEG00000019966) #24 GPR37 (ENSFHEG00000019972) #26 SPAM1 (ENSFHEG00000020119) #27 ENSFHEG00000020134 #27 HYAL4 (ENSFHEG00000020145) #28 hyal6 (ENSFHEG00000020171) ##28 wasla (ENSFHEG00000020219) #29 IQUB (ENSFHEG00000020243) #34 slc13a1 (ENSFHEG00000020339) #35 ENSFHEG00000020350 #36 CADPS2 (ENSFHEG00000020416) #36 fezf1 (ENSFHEG00000020444) aass (ENSFHEG00000020618) PTPRZ1 (ENSFHEG00000020707) ANO1 (ENSFHEG00000020741) Sheepshead minnow MODERN SPECIES 482 rlbp1b (ENSCVAG00000009243) ENSCVAG00000009300 pdia3 (ENSCVAG00000009351) CKMT1B (ENSCVAG00000009359) ENSCVAG00000009414 si:ch1073-281m9.1 (ENSCVAG00000009421) alkbh3 (ENSCVAG00000009432) hsd17b12a (ENSCVAG00000009483) api5 (ENSCVAG00000009525) samm50 (ENSCVAG00000009564) tdg.1 (ENSCVAG00000009574) ENSCVAG00000000702 ftsj1 (ENSCVAG00000009618) acot19 (ENSCVAG00000009651) ENSCVAG00000009661 grm8b (ENSCVAG00000009693) #22 ENSCVAG00000009712 #24 GPR37 (ENSCVAG00000009716) #26 SPAM1 (ENSCVAG00000009780) #27 ENSCVAG00000000850 #27 HYAL4 (ENSCVAG00000009793) #28 hyal6 (ENSCVAG00000009802) ##28 ENSCVAG00000009815 #29 ENSCVAG00000009831 Aplocheiloidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.cb.a #22 Turquoise killifish MODERN SPECIES 1623 ASB15 (ENSNFUG00015012906) #31 IQUB (ENSNFUG00015012926) #34 slc13a1 (ENSNFUG00015012971) #35 CADPS2 (ENSNFUG00015013246) #36 ENSNFUG00015016146 ENSNFUG00015016148 fezf1 (ENSNFUG00015016152) AASS (ENSNFUG00015016246) ENSNFUG00015017364 PTPRZ1 (ENSNFUG00015017375) ENSNFUG00015017402 ENSNFUG00015004770 dldh (ENSNFUG00015004817) ENSNFUG00015004909 SYT8 (ENSNFUG00015004914) GRM8 (ENSNFUG00015005037) #22 ENSNFUG00015005496 pot1 (ENSNFUG00015005521) #24 CR759921.2 (ENSNFUG00015005669) #26 SPAM1 (ENSNFUG00015005670) #27 HYAL4 (ENSNFUG00015005678) #28 hyal6 (ENSNFUG00015005688) ##28 WASLA (ENSNFUG00015005698) #29 ENSNFUG00015005712 ENSNFUG00015005718 ENSNFUG00015005736 OLA.8940 (ENSNFUG00015005742) C25H11ORF24 (ENSNFUG00015005745) LRP5 (ENSNFUG00015005904) BCAR1 (ENSNFUG00015008030) RLTPR (ENSNFUG00015008042) Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.d.a ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Ballan wrasse MODERN SPECIES 74 ENSLBEG00000003441 ENSLBEG00000003491 grm8b (ENSLBEG00000003508) #22 pot1 (ENSLBEG00000003608) #24 GPR37 (ENSLBEG00000003718) #26 SPAM1 (ENSLBEG00000003733) #27 ENSLBEG00000003753 #27 HYAL4 (ENSLBEG00000003777) #28 hyal6 (ENSLBEG00000003795) ##28 wasla (ENSLBEG00000003825) #29 lmod2a (ENSLBEG00000003853) #30 ASB15 (ENSLBEG00000003875) #31 ASB15 (ENSLBEG00000003921) #31 IQUB (ENSLBEG00000003961) #34 slc13a1 (ENSLBEG00000004005) #35 CADPS2 (ENSLBEG00000004036) #36 fezf1 (ENSLBEG00000004119) aass (ENSLBEG00000004152) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.d.a ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Perciformes ANCESTRAL SPECIES 7 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.c ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00390000009456 ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.c ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A ENSGT00420000029847 Lumpfish MODERN SPECIES 21 deaf1 (ENSCLMG00005003985) ENSCLMG00005003984 drd4a (ENSCLMG00005003931) ENSCLMG00005003926 GRAMD4 (ENSCLMG00005003719) CERK (ENSCLMG00005003714) ENSCLMG00005003712 ENSCLMG00005003563 TAFA5 (ENSCLMG00005003551) ENSCLMG00005003550 BRD1 (ENSCLMG00005003549) ftsj1 (ENSCLMG00005003546) ENSCLMG00005003544 ENSCLMG00005003543 ENSCLMG00005003077 grm8b (ENSCLMG00005002952) #22 pot1 (ENSCLMG00005002901) #24 ENSCLMG00005002864 GPR37 (ENSCLMG00005002827) #26 SPAM1 (ENSCLMG00005009625) #27 SPAM1 (ENSCLMG00005009622) #27 ENSCLMG00005009601 #27 HYAL4 (ENSCLMG00005009599) #28 hyal6 (ENSCLMG00005009598) ##28 ENSCLMG00005009596 lmod2a (ENSCLMG00005009592) #30 ENSCLMG00005009590 CADPS2 (ENSCLMG00005008584) #36 fezf1 (ENSCLMG00005008575) aass (ENSCLMG00005008467) PTPRZ1 (ENSCLMG00005007942) Stickleback MODERN SPECIES 14 GRAMD4 (ENSGACG00000008914) ENSGACG00000008907 CERK (ENSGACG00000008898) ENSGACG00000008891 TAFA5 (ENSGACG00000008880) ENSGACG00000008877 ENSGACG00000008872 ENSGACG00000008869 brd1b (ENSGACG00000008866) ftsj1 (ENSGACG00000008843) ENSGACG00000008837 ENSGACG00000008835 acot19 (ENSGACG00000008783) ENSGACG00000008779 ENSGACG00000008775 grm8b (ENSGACG00000008757) #22 pot1 (ENSGACG00000008743) #24 GPR37 (ENSGACG00000008739) #26 ENSGACG00000008735 SPAM1 (ENSGACG00000008730) #27 HYAL4 (ENSGACG00000008727) #28 hyal6 (ENSGACG00000008707) ##28 lmod2a (ENSGACG00000008702) #30 ENSGACG00000008687 #31 IQUB (ENSGACG00000008678) #34 CADPS2 (ENSGACG00000008655) #36 fezf1 (ENSGACG00000008652) aass (ENSGACG00000008638) PTPRZ1 (ENSGACG00000008617) ENSGACG00000008612 ENSGACG00000008606 Perciformes_a ANCESTRAL SPECIES 33 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000156976.gb ENSGT00940000160682.b.c.a ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT01010000222336.b.a.b.b.d.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Pike perch MODERN SPECIES 51 GRAMD4 (ENSSLUG00000024535) CERK (ENSSLUG00000024522) ENSSLUG00000024521 ENSSLUG00000024514 ENSSLUG00000024512 ENSSLUG00000024511 TAFA5 (ENSSLUG00000024509) ENSSLUG00000024508 brd1b (ENSSLUG00000024505) ftsj1 (ENSSLUG00000024502) ENSSLUG00000024500 ENSSLUG00000024499 ENSSLUG00000024497 ENSSLUG00000024492 ENSSLUG00000024490 grm8b (ENSSLUG00000024447) #22 pot1 (ENSSLUG00000024433) #24 GPR37 (ENSSLUG00000024432) #26 SPAM1 (ENSSLUG00000024430) #27 ENSSLUG00000024427 #27 HYAL4 (ENSSLUG00000024403) #28 hyal6 (ENSSLUG00000024395) ##28 wasla (ENSSLUG00000024392) #29 lmod2a (ENSSLUG00000024384) #30 ASB15 (ENSSLUG00000024375) #31 ASB15 (ENSSLUG00000024364) #31 IQUB (ENSSLUG00000024356) #34 slc13a1 (ENSSLUG00000024331) #35 CADPS2 (ENSSLUG00000021359) #36 fezf1 (ENSSLUG00000021164) ENSSLUG00000021159 Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.d.a ENSGT01010000222336.b.a.b.b.d.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Gilthead seabream MODERN SPECIES 22 ENSSAUG00010012038 ENSSAUG00010012036 ENSSAUG00010012033 ENSSAUG00010012032 ENSSAUG00010012031 ENSSAUG00010012029 ENSSAUG00010012028 ENSSAUG00010012027 ENSSAUG00010012026 ENSSAUG00010012025 ENSSAUG00010012024 ENSSAUG00010012022 ENSSAUG00010012020 ENSSAUG00010012019 ENSSAUG00010012017 grm8b (ENSSAUG00010010784) #22 pot1 (ENSSAUG00010010739) #24 ENSSAUG00010010737 ENSSAUG00010010736 ENSSAUG00010010734 ENSSAUG00010010733 ENSSAUG00010010732 GPR37 (ENSSAUG00010010731) #26 ENSSAUG00010010729 ENSSAUG00010010728 ENSSAUG00010010727 ENSSAUG00010010726 ENSSAUG00010010724 ENSSAUG00010010723 ENSSAUG00010010722 PTPRZ1 (ENSSAUG00010009324) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.d.a ENSGT01010000222336.b.a.b.b.d.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 European seabass MODERN SPECIES 19 ENSDLAG00005010435 ENSDLAG00005010447 ENSDLAG00005029838 ENSDLAG00005010474 ENSDLAG00005010607 ENSDLAG00005010638 ENSDLAG00005010661 ENSDLAG00005010679 TAFA5 (ENSDLAG00005029845) ENSDLAG00005010707 ENSDLAG00005010727 ENSDLAG00005010793 ENSDLAG00005032404 ENSDLAG00005010803 ENSDLAG00005028034 grm8b (ENSDLAG00005010846) #22 pot1 (ENSDLAG00005011048) #24 GPR37 (ENSDLAG00005030142) #26 SPAM1 (ENSDLAG00005011098) #27 HYAL4 (ENSDLAG00005032159) #28 hyal6 (ENSDLAG00005011119) ##28 wasla (ENSDLAG00005011146) #29 lmod2a (ENSDLAG00005011520) #30 ASB15 (ENSDLAG00005011528) #31 ASB15 (ENSDLAG00005011536) #31 ENSDLAG00005011549 CADPS2 (ENSDLAG00005011584) #36 fezf1 (ENSDLAG00005028669) aass (ENSDLAG00005012375) PTPRZ1 (ENSDLAG00005013463) ENSDLAG00005029844 Large yellow croaker MODERN SPECIES 492 ENSLCRG00005003923 BET1L (ENSLCRG00005002896) deaf1 (ENSLCRG00005002888) drd4a (ENSLCRG00005002869) ENSLCRG00005002862 GRAMD4 (ENSLCRG00005002568) ENSLCRG00005002440 CERK (ENSLCRG00005002032) ENSLCRG00005001949 TAFA5 (ENSLCRG00005001930) brd1b (ENSLCRG00005001895) ftsj1 (ENSLCRG00005001792) ENSLCRG00005001733 ENSLCRG00005001711 acot19 (ENSLCRG00005001369) grm8b (ENSLCRG00005001230) #22 pot1 (ENSLCRG00005001136) #24 GPR37 (ENSLCRG00005001116) #26 SPAM1 (ENSLCRG00005001109) #27 ENSLCRG00005001093 #27 HYAL4 (ENSLCRG00005001083) #28 hyal6 (ENSLCRG00005001078) ##28 wasla (ENSLCRG00005022134) #29 lmod2a (ENSLCRG00005022129) #30 ASB15 (ENSLCRG00005022127) #31 ASB15 (ENSLCRG00005022123) #31 IQUB (ENSLCRG00005022117) #34 slc13a1 (ENSLCRG00005022115) #35 CADPS2 (ENSLCRG00005020853) #36 fezf1 (ENSLCRG00005020826) aass (ENSLCRG00005020281) Tetraodontidae ANCESTRAL SPECIES 32 ENSGT00940000164526.b ENSGT00950000182902.b.a.c ENSGT00940000156049.a ENSGT00940000159628.d ENSGT00940000155971.d.a.b ENSGT00390000009048.a.a.h.d ENSGT00940000158701.b ENSGT00940000156476.h ENSGT00390000016075 ENSGT00390000012715.f ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A ENSGT00390000009456 ENSGT00420000029847 Tetraodon MODERN SPECIES 4 rlbp1b (ENSTNIG00000010390) ABHD2 (ENSTNIG00000010391) mfge8b (ENSTNIG00000010392) hapln3 (ENSTNIG00000010393) ENSTNIG00000010394 PPIP5K1 (ENSTNIG00000010395) ENSTNIG00000010396 scamp2 (ENSTNIG00000010397) mpi (ENSTNIG00000010398) plex9.2 (ENSTNIG00000010399) ENSTNIG00000010400 brd1b (ENSTNIG00000010401) ftsj1 (ENSTNIG00000010402) ENSTNIG00000010403 acot19 (ENSTNIG00000010404) grm8b (ENSTNIG00000010405) #22 pot1 (ENSTNIG00000010406) #24 GPR37 (ENSTNIG00000010407) #26 HYAL4 (ENSTNIG00000000981) #28 hyal6 (ENSTNIG00000010408) ##28 wasla (ENSTNIG00000010409) #29 ASB15 (ENSTNIG00000010410) #31 IQUB (ENSTNIG00000010411) #34 slc13a1 (ENSTNIG00000010412) #35 CADPS2 (ENSTNIG00000010413) #36 fezf1 (ENSTNIG00000010414) aass (ENSTNIG00000010415) ENSTNIG00000010416 faap24 (ENSTNIG00000000540) ENSTNIG00000000465 ANKRD27 (ENSTNIG00000010417) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Carangaria ANCESTRAL SPECIES 6 ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Carangaria_A ANCESTRAL SPECIES ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Seriola ANCESTRAL SPECIES 60 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000181101 ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b.i ENSGT01010000222336.b.a.b.b.j ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Greater amberjack MODERN SPECIES 160 deaf1 (ENSSDUG00000014917) drd4a (ENSSDUG00000014941) ENSSDUG00000014964 GRAMD4 (ENSSDUG00000014993) ENSSDUG00000015057 CERK (ENSSDUG00000015070) ENSSDUG00000015094 TAFA5 (ENSSDUG00000015121) brd1b (ENSSDUG00000015144) ENSSDUG00000015213 ftsj1 (ENSSDUG00000015226) ENSSDUG00000015252 ENSSDUG00000015280 ENSSDUG00000015293 ENSSDUG00000015319 grm8b (ENSSDUG00000015341) #22 pot1 (ENSSDUG00000015409) #24 GPR37 (ENSSDUG00000015438) #26 SPAM1 (ENSSDUG00000015441) #27 ENSSDUG00000015451 #27 HYAL4 (ENSSDUG00000015461) #28 hyal6 (ENSSDUG00000015466) ##28 wasla (ENSSDUG00000015481) #29 lmod2a (ENSSDUG00000015562) #30 ASB15 (ENSSDUG00000015571) #31 ASB15 (ENSSDUG00000015587) #31 IQUB (ENSSDUG00000015614) #34 slc13a1 (ENSSDUG00000015639) #35 CADPS2 (ENSSDUG00000015715) #36 fezf1 (ENSSDUG00000015875) aass (ENSSDUG00000015904) Yellowtail amberjack MODERN SPECIES 2999 deaf1 (ENSSLDG00000020145) drd4a (ENSSLDG00000020130) ENSSLDG00000020118 GRAMD4 (ENSSLDG00000020093) ENSSLDG00000020057 CERK (ENSSLDG00000020024) ENSSLDG00000019986 TAFA5 (ENSSLDG00000019978) ENSSLDG00000019962 brd1b (ENSSLDG00000019896) ftsj1 (ENSSLDG00000019859) ENSSLDG00000019853 ENSSLDG00000019847 ENSSLDG00000019824 ENSSLDG00000019285 grm8b (ENSSLDG00000019159) #22 pot1 (ENSSLDG00000019126) #24 GPR37 (ENSSLDG00000019117) #26 SPAM1 (ENSSLDG00000019102) #27 ENSSLDG00000018958 #27 HYAL4 (ENSSLDG00000018920) #28 hyal6 (ENSSLDG00000018904) ##28 wasla (ENSSLDG00000018795) #29 lmod2a (ENSSLDG00000018765) #30 ASB15 (ENSSLDG00000018744) #31 ASB15 (ENSSLDG00000018725) #31 IQUB (ENSSLDG00000018682) #34 slc13a1 (ENSSLDG00000018544) #35 CADPS2 (ENSSLDG00000018339) #36 fezf1 (ENSSLDG00000018288) aass (ENSSLDG00000018255) Barramundi perch MODERN SPECIES 31 ENSLCAG00010000776 PRDM11 (ENSLCAG00010000770) ENSLCAG00010000768 ENSLCAG00010000765 ENSLCAG00010000692 actr6 (ENSLCAG00010000610) sycp3 (ENSLCAG00010000570) si:ch211-59o9.10 (ENSLCAG00010000556) lyrm5b (ENSLCAG00010000546) ftsj1 (ENSLCAG00010000530) brd1b (ENSLCAG00010000509) ENSLCAG00010000493 ENSLCAG00010000489 ENSLCAG00010000482 ENSLCAG00010000456 grm8b (ENSLCAG00010000405) #22 pot1 (ENSLCAG00010000346) #24 GPR37 (ENSLCAG00010000337) #26 SPAM1 (ENSLCAG00010000329) #27 ENSLCAG00010000320 #27 HYAL4 (ENSLCAG00010000312) #28 hyal6 (ENSLCAG00010000307) ##28 wasla (ENSLCAG00010000300) #29 lmod2a (ENSLCAG00010000294) #30 ASB15 (ENSLCAG00010000274) #31 ASB15 (ENSLCAG00010000226) #31 IQUB (ENSLCAG00010000189) #34 ENSLCAG00010013451 slc13a1 (ENSLCAG00010013405) #35 CADPS2 (ENSLCAG00010013231) #36 fezf1 (ENSLCAG00010013213) Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000158686 ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000162463 ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Tongue sole MODERN SPECIES 16 wee1 (ENSCSEG00000001192) ENSCSEG00000001338 pard6a (ENSCSEG00000001342) gal (ENSCSEG00000001348) cfdp1 (ENSCSEG00000001361) bcar1 (ENSCSEG00000001369) zgc:158868 (ENSCSEG00000001377) CCND1 (ENSCSEG00000001379) NTRK3 (ENSCSEG00000001381) ENSCSEG00000001387 ska1 (ENSCSEG00000001402) ENSCSEG00000001448 ENSCSEG00000001449 ENSCSEG00000001456 KLHL25 (ENSCSEG00000001476) grm8b (ENSCSEG00000001491) #22 ENSCSEG00000001498 #24 GPR37 (ENSCSEG00000001505) #26 SPAM1 (ENSCSEG00000001515) #27 ENSCSEG00000001520 #27 HYAL4 (ENSCSEG00000001523) #28 hyal6 (ENSCSEG00000001525) ##28 wasla (ENSCSEG00000001529) #29 lmod2a (ENSCSEG00000001544) #30 ASB15 (ENSCSEG00000001535) #31 IQUB (ENSCSEG00000001550) #34 slc13a1 (ENSCSEG00000001556) #35 CADPS2 (ENSCSEG00000001570) #36 ASB15 (ENSCSEG00000001600) #31 fezf1 (ENSCSEG00000001604) aass (ENSCSEG00000001607) Turbot MODERN SPECIES 1 ENSSMAG00000001224 ENSSMAG00000033202 ENSSMAG00000001330 ENSSMAG00000001390 ENSSMAG00000032504 ENSSMAG00000001487 ENSSMAG00000001551 CERK (ENSSMAG00000001584) ENSSMAG00000001620 TAFA5 (ENSSMAG00000035868) ENSSMAG00000001655 ENSSMAG00000001754 ENSSMAG00000001769 ENSSMAG00000001799 ENSSMAG00000001804 grm8b (ENSSMAG00000001950) #22 pot1 (ENSSMAG00000001989) #24 GPR37 (ENSSMAG00000002015) #26 SPAM1 (ENSSMAG00000002022) #27 HYAL4 (ENSSMAG00000002037) #28 hyal6 (ENSSMAG00000002043) ##28 wasla (ENSSMAG00000002064) #29 lmod2a (ENSSMAG00000002140) #30 ASB15 (ENSSMAG00000002167) #31 ASB15 (ENSSMAG00000002199) #31 IQUB (ENSSMAG00000002231) #34 slc13a1 (ENSSMAG00000002260) #35 ENSSMAG00000002312 CADPS2 (ENSSMAG00000020348) #36 fezf1 (ENSSMAG00000025856) aass (ENSSMAG00000020423) Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000154189.B ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000164955.b ENSGT00940000156976.gb ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000161051.a.a.b.b.b.b.f ENSGT00940000154189.B ENSGT00940000154527.a.a.b.b ENSGT00940000160208 ENSGT00940000159701 ENSGT00940000160974.b.c ENSGT00390000017767.a.b ENSGT00390000010968.a ENSGT00940000156976.gb ENSGT00940000160682.b.c.a ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000153394.c.b.a ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.b #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A Climbing perch MODERN SPECIES 19 ENSATEG00000008283 ENSATEG00000027990 ENSATEG00000026612 ENSATEG00000026129 ENSATEG00000027675 CERK (ENSATEG00000008356) TAFA5 (ENSATEG00000008367) BRD1 (ENSATEG00000008389) ENSATEG00000008408 ENSATEG00000008462 ENSATEG00000008467 ENSATEG00000008942 ENSATEG00000008584 ENSATEG00000008651 ENSATEG00000008487 grm8b (ENSATEG00000009125) #22 pot1 (ENSATEG00000009162) #24 GPR37 (ENSATEG00000009169) #26 SPAM1 (ENSATEG00000009174) #27 HYAL4 (ENSATEG00000009180) #28 hyal6 (ENSATEG00000009185) ##28 ENSATEG00000009209 lmod2a (ENSATEG00000009242) #30 ASB15 (ENSATEG00000009261) #31 ASB15 (ENSATEG00000009270) #31 IQUB (ENSATEG00000009290) #34 slc13a1 (ENSATEG00000009372) #35 CADPS2 (ENSATEG00000009437) #36 fezf1 (ENSATEG00000009565) aass (ENSATEG00000009598) PTPRZ1 (ENSATEG00000009734) Siamese fighting fish MODERN SPECIES 17 BET1L (ENSBSLG00000026450) ENSBSLG00000026395 ENSBSLG00000026318 ENSBSLG00000026315 ENSBSLG00000026292 ENSBSLG00000026251 ENSBSLG00000026224 ENSBSLG00000026214 ENSBSLG00000026209 PPIP5K1 (ENSBSLG00000026072) ENSBSLG00000025852 ENSBSLG00000025849 hapln3 (ENSBSLG00000025847) mfge8b (ENSBSLG00000025833) ABHD2 (ENSBSLG00000025813) grm8b (ENSBSLG00000025590) #22 pot1 (ENSBSLG00000025472) #24 GPR37 (ENSBSLG00000025434) #26 SPAM1 (ENSBSLG00000025408) #27 ENSBSLG00000025276 #27 HYAL4 (ENSBSLG00000025274) #28 hyal6 (ENSBSLG00000025272) ##28 wasla (ENSBSLG00000025232) #29 lmod2a (ENSBSLG00000025226) #30 ASB15 (ENSBSLG00000025225) #31 ASB15 (ENSBSLG00000025224) #31 IQUB (ENSBSLG00000025223) #34 slc13a1 (ENSBSLG00000025222) #35 CADPS2 (ENSBSLG00000023232) #36 fezf1 (ENSBSLG00000022864) aass (ENSBSLG00000022247) Zig-zag eel MODERN SPECIES 20 ENSMAMG00000022864 ENSMAMG00000025538 ENSMAMG00000022860 ENSMAMG00000022858 ENSMAMG00000022854 GRAMD4 (ENSMAMG00000022851) ENSMAMG00000028229 CERK (ENSMAMG00000022847) TAFA5 (ENSMAMG00000022845) BRD1 (ENSMAMG00000022843) ENSMAMG00000027991 ENSMAMG00000022839 ENSMAMG00000022838 ENSMAMG00000022837 ENSMAMG00000022835 grm8b (ENSMAMG00000022833) #22 pot1 (ENSMAMG00000022831) #24 GPR37 (ENSMAMG00000022830) #26 SPAM1 (ENSMAMG00000022828) #27 HYAL4 (ENSMAMG00000022826) #28 hyal6 (ENSMAMG00000022825) ##28 wasla (ENSMAMG00000022824) #29 lmod2a (ENSMAMG00000022821) #30 ASB15 (ENSMAMG00000022819) #31 ENSMAMG00000022816 ASB15 (ENSMAMG00000022815) #31 IQUB (ENSMAMG00000022809) #34 slc13a1 (ENSMAMG00000022806) #35 CADPS2 (ENSMAMG00000022799) #36 fezf1 (ENSMAMG00000022795) aass (ENSMAMG00000022779) Cod MODERN SPECIES 22 ENSGMOG00000034982 erc1a (ENSGMOG00000018675) ENSGMOG00000020282 ENSGMOG00000003787 ENSGMOG00000029283 ENSGMOG00000022829 ENSGMOG00000034918 ENSGMOG00000003720 ENSGMOG00000002614 ENSGMOG00000019109 #18 zgc:77752 (ENSGMOG00000025842) ENSGMOG00000031857 ENSGMOG00000019094 ENSGMOG00000019087 ENSGMOG00000001705 ENSGMOG00000002146 #22 ENSGMOG00000016398 #24 parp12a (ENSGMOG00000016384) parp12a (ENSGMOG00000009778) ENSGMOG00000004450 ENSGMOG00000004511 mical3a (ENSGMOG00000004543) ttc38 (ENSGMOG00000004593) tspan33b (ENSGMOG00000004617) ENSGMOG00000024261 ENSGMOG00000006960 ENSGMOG00000006977 ENSGMOG00000006995 ENSGMOG00000007003 ENSGMOG00000018389 ENSGMOG00000018428 Protacanthopterygii ANCESTRAL SPECIES 42 ENSGT00940000160004.d.a ENSGT00940000159916 ENSGT00940000156870 ENSGT00940000163149.a.a.a.a ENSGT00940000159839.d.b ENSGT00940000154189.B ENSGT00940000158686 ENSGT00390000010968.a ENSGT00940000156976.gb ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.b.b ENSGT00940000157236.j ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A ENSGT00550000074844 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 254 ENSGT00940000160004.d.a ENSGT00940000159916.n ENSGT00940000156870.b.a ENSGT00940000163149.a.a.a.a.b.a ENSGT00940000159839.d.b.c ENSGT00940000154189.B ENSGT00940000158686.a ENSGT00390000010968.a.h ENSGT00940000156976.gb.a ENSGT01030000234567.B.a.a.b.a.a.c.a ENSGT00940000160682.b.c.b.b.b ENSGT00940000157236.j.b ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.a.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a.b #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.b.e #28 ENSGT00730000110895.b.a.o.a.d.b #29 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.k.b #36 ENSGT00940000159477.d ENSGT00390000013249.e.a ENSGT00940000155529.A.f ENSGT00550000074844.jb.b ENSGT00940000157682.B.b.b ENSGT00940000163706 ENSGT00940000160208 ENSGT00940000159701 Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000159839.d.b.c ENSGT00940000154189.B ENSGT00940000158686.a ENSGT00390000010968.a.h ENSGT00940000156976.gb.a ENSGT01030000234567.B.a.a.b.a.a.c.a.h.b ENSGT00940000163149.a.a.a.a.b.b ENSGT01100000263568.b.a.c.b.a.a.b.a.d.a.a ENSGT00940000160682.b.c.b.b.b ENSGT00940000157236.j.b ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01010000222336.b.a.b.a.y.b ENSGT01010000222336.b.a.b.a.y.a ENSGT01030000234648.a.b.a.a.b.cb.a.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a.b #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.b.e #28 ENSGT00730000110895.b.a.o.a.d.b #29 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.k.b #36 ENSGT00940000159477.d ENSGT00390000013249.e.a ENSGT00940000155529.A.f ENSGT00550000074844.jb.b ENSGT00940000157682.B.b.b ENSGT00940000163706 ENSGT00940000160208 ENSGT00940000159701 Oncorhynchus ANCESTRAL SPECIES 51 ENSGT00940000154189.B ENSGT00940000158686.a ENSGT00390000010968.a.h ENSGT00940000156976.gb.a ENSGT01030000234567.B.a.a.b.a.a.c.a.h.b ENSGT01030000234567.B.a.a.b.a.a.c.a.g ENSGT00940000163149.a.a.a.a.b.b ENSGT01100000263568.b.a.c.b.a.a.b.a.d.a.a ENSGT00940000160682.b.c.b.b.b ENSGT00940000157236.j.b ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01010000222336.b.a.b.a.y.b ENSGT01010000222336.b.a.b.a.y.a ENSGT01030000234648.a.b.a.a.b.cb.a.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a.b #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.b.e #28 ENSGT00730000110895.b.a.o.a.d.b #29 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.k.b #36 ENSGT00940000159477.d ENSGT00390000013249.e.a ENSGT00940000155529.A.f ENSGT00550000074844.jb.b ENSGT00940000157682.B.b.b ENSGT00940000163706 ENSGT00940000160208 ENSGT00940000159701 Rainbow trout MODERN SPECIES 22 ENSOMYG00000040682 ENSOMYG00000060347 ENSOMYG00000040736 ENSOMYG00000040770 ENSOMYG00000040779 ENSOMYG00000066386 ENSOMYG00000040795 brd1b (ENSOMYG00000040816) pim3 (ENSOMYG00000040827) ENSOMYG00000040831 ENSOMYG00000075189 ENSOMYG00000040835 ENSOMYG00000040845 ENSOMYG00000040853 ENSOMYG00000040859 grm8b (ENSOMYG00000040965) #22 pot1 (ENSOMYG00000042082) #24 GPR37 (ENSOMYG00000070616) #26 SPAM1 (ENSOMYG00000042108) #27 ENSOMYG00000042913 #28 ENSOMYG00000060586 ENSOMYG00000058072 WASL (ENSOMYG00000053954) #29 ENSOMYG00000051408 slc13a1 (ENSOMYG00000042153) #35 ENSOMYG00000042228 #36 fezf1 (ENSOMYG00000042293) aass (ENSOMYG00000042455) PTPRZ1 (ENSOMYG00000044183) ENSOMYG00000044213 ENSOMYG00000053913 Oncorhynchus_a ANCESTRAL SPECIES 36 ENSGT00940000154189.B ENSGT00940000158686.a ENSGT00390000010968.a.h ENSGT00940000156976.gb.a ENSGT01030000234567.B.a.a.b.a.a.c.a.h.b ENSGT01030000234567.B.a.a.b.a.a.c.a.g ENSGT00940000163149.a.a.a.a.b.b ENSGT01100000263568.b.a.c.b.a.a.b.a.d.a.a ENSGT00940000160682.b.c.b.b.b ENSGT00940000157236.j.b ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01010000222336.b.a.b.a.y.b ENSGT01010000222336.b.a.b.a.y.a ENSGT01030000234648.a.b.a.a.b.cb.a.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a.b #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.b.e #28 ENSGT00730000110895.b.a.o.a.d.b #29 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.k.b #36 ENSGT00940000159477.d ENSGT00390000013249.e.a ENSGT00940000155529.A.f ENSGT00550000074844.jb.b ENSGT00940000157682.B.b.b ENSGT00940000163706 ENSGT00940000160208 ENSGT00940000159701 Coho salmon MODERN SPECIES 1 atp2b1b (ENSOKIG00005022994) GRAMD4 (ENSOKIG00005023671) CERK (ENSOKIG00005023922) ENSOKIG00005024193 ENSOKIG00005024431 ENSOKIG00005025246 ENSOKIG00005025298 ENSOKIG00005025330 TAFA5 (ENSOKIG00005025395) brd1b (ENSOKIG00005025419) pim3 (ENSOKIG00005025449) ENSOKIG00005025494 acot19 (ENSOKIG00005025513) ENSOKIG00005025647 ENSOKIG00005025694 grm8b (ENSOKIG00005025800) #22 ENSOKIG00005027315 pot1 (ENSOKIG00005027346) #24 GPR37 (ENSOKIG00005027374) #26 SPAM1 (ENSOKIG00005027377) #27 HYAL4 (ENSOKIG00005027389) #28 WASL (ENSOKIG00005027406) #29 slc13a1 (ENSOKIG00005027455) #35 CADPS2 (ENSOKIG00005027642) #36 fezf1 (ENSOKIG00005028474) aass (ENSOKIG00005028706) PTPRZ1 (ENSOKIG00005031860) DLD (ENSOKIG00005032474) ENSOKIG00005032722 ENSOKIG00005032730 ticam1 (ENSOKIG00005032764) Chinook salmon MODERN SPECIES atp2b1b (ENSOTSG00005017785) GRAMD4 (ENSOTSG00005033375) CERK (ENSOTSG00005033554) ENSOTSG00005033635 ENSOTSG00005033637 ENSOTSG00005000051 ENSOTSG00005000106 ENSOTSG00005000220 TAFA5 (ENSOTSG00005000310) brd1b (ENSOTSG00005000316) pim3 (ENSOTSG00005000325) ENSOTSG00005000332 acot19 (ENSOTSG00005000338) ENSOTSG00005000357 ENSOTSG00005000363 grm8b (ENSOTSG00005000377) #22 pot1 (ENSOTSG00005000396) #24 GPR37 (ENSOTSG00005000419) #26 SPAM1 (ENSOTSG00005000420) #27 HYAL4 (ENSOTSG00005000422) #28 WASL (ENSOTSG00005000424) #29 slc13a1 (ENSOTSG00005000437) #35 CADPS2 (ENSOTSG00005000454) #36 fezf1 (ENSOTSG00005000577) aass (ENSOTSG00005000626) PTPRZ1 (ENSOTSG00005007896) dldh (ENSOTSG00005008481) ENSOTSG00005009315 ENSOTSG00005009316 ticam1 (ENSOTSG00005009318) BET1L (ENSOTSG00005009320) Salmo ANCESTRAL SPECIES 20 ENSGT00940000154189.B ENSGT00940000158686.a ENSGT00390000010968.a.h ENSGT00940000156976.gb.a ENSGT01030000234567.B.a.a.b.a.a.c.a.h.a.b ENSGT01030000234567.B.a.a.b.a.a.c.a.h.a.a ENSGT00940000163149.a.a.a.a.b.b ENSGT01100000263568.b.a.c.b.a.a.b.a.d.a.a ENSGT00940000160682.b.c.b.b.b ENSGT00940000157236.j.b ENSGT00940000153394.c.b.b.c.a.b ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01010000222336.b.a.b.a.y.b ENSGT01010000222336.b.a.b.a.y.a ENSGT01030000234648.a.b.a.a.b.cb.a.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a.b #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.b.e #28 ENSGT00730000110895.b.a.o.a.d.b #29 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b.k.a.a.b #36 ENSGT00940000159477.d ENSGT00390000013249.f ENSGT00940000155529.A.f ENSGT00550000074844.jb.b ENSGT00940000157682.B.b.b ENSGT00940000163706 ENSGT00940000160208 ENSGT00940000159701 Atlantic salmon MODERN SPECIES 15 ENSSSAG00000109672 ENSSSAG00000085962 ENSSSAG00000091276 ENSSSAG00000114453 ENSSSAG00000073526 ENSSSAG00000104714 ENSSSAG00000097015 TAFA5 (ENSSSAG00000097188) brd1 (ENSSSAG00000073508) pim3 (ENSSSAG00000082225) ENSSSAG00000073496 ENSSSAG00000073473 ENSSSAG00000098897 ENSSSAG00000083301 ENSSSAG00000101123 grm8b (ENSSSAG00000072482) #22 ENSSSAG00000082122 pot1 (ENSSSAG00000072442) #24 GPR37 (ENSSSAG00000089813) #26 ENSSSAG00000072432 #28 ENSSSAG00000072422 #29 ENSSSAG00000103667 slc13a1 (ENSSSAG00000072331) #35 ENSSSAG00000090692 #36 ENSSSAG00000060765 #36 fezf1 (ENSSSAG00000059944) aass (ENSSSAG00000056714) PTPRZ1 (ENSSSAG00000056177) ENSSSAG00000055366 ENSSSAG00000084730 ENSSSAG00000055331 River trout MODERN SPECIES 33 ENSSTUG00000019789 ENSSTUG00000019766 ENSSTUG00000019259 ENSSTUG00000018941 ENSSTUG00000018460 ENSSTUG00000018201 ENSSTUG00000018164 ENSSTUG00000018155 TAFA5 (ENSSTUG00000018136) brd1b (ENSSTUG00000018121) pim3 (ENSSTUG00000018104) ENSSTUG00000025909 ENSSTUG00000025891 acot19 (ENSSTUG00000025757) ENSSTUG00000025734 grm8b (ENSSTUG00000024251) #22 pot1 (ENSSTUG00000023829) #24 GPR37 (ENSSTUG00000023814) #26 SPAM1 (ENSSTUG00000023809) #27 HYAL4 (ENSSTUG00000023804) #28 ENSSTUG00000023785 slc13a1 (ENSSTUG00000023758) #35 CADPS2 (ENSSTUG00000023122) #36 fezf1 (ENSSTUG00000023090) aass (ENSSTUG00000019952) ENSSTUG00000019843 PTPRZ1 (ENSSTUG00000017658) dldh (ENSSTUG00000017505) ENSSTUG00000017492 ENSSTUG00000017480 ticam1 (ENSSTUG00000017476) Huchen MODERN SPECIES 465 ENSHHUG00000046668 TAFA5 (ENSHHUG00000046666) brd1b (ENSHHUG00000046663) pim3 (ENSHHUG00000046660) ENSHHUG00000046659 acot19 (ENSHHUG00000046606) grm8b (ENSHHUG00000046541) #22 Salmoninae ANCESTRAL SPECIES 539 ENSGT01030000234648.a.b.a.a.b.cb.a.b #22 ENSGT01100000263518.B.b.b.a.a #26 ENSGT00390000010899.a.b.b.b.k.a.a ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b.f #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a.d.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.l #36 ENSGT00940000159477.c ENSGT00940000155529.A.e ENSGT00550000074844.jb.a ENSGT00950000183052.b.c.b.b.a.a.b.b Salmoninae_a ANCESTRAL SPECIES 13 ENSGT00950000183002.A.a ENSGT00940000156626.hb ENSGT00990000203615.a.a.a.b.g ENSGT01050000244956.a.a.h ENSGT00940000160004.d.b ENSGT00940000159916.m ENSGT00940000156870.b.b ENSGT00940000163149.a.a.a.a.a ENSGT00940000159839.d.b.d ENSGT00940000158686.b ENSGT00390000010968.a.g ENSGT00940000160928.n.a.j ENSGT00940000156976.gb.b ENSGT00940000160682.b.c.b.b.a ENSGT00940000157236.j.a ENSGT01030000234648.a.b.a.a.b.cb.a.b #22 ENSGT01100000263518.B.b.b.a.a #26 ENSGT00390000010899.a.b.b.b.k.a.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b.f #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a.d.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.l #36 ENSGT00940000159477.c ENSGT00940000155529.A.e ENSGT00550000074844.jb.a ENSGT00950000183052.b.c.b.b.a.a.b.b Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00950000183002.A.a ENSGT00940000156626.hb ENSGT00990000203615.a.a.a.b.g ENSGT01050000244956.a.a.h ENSGT00940000160004.d.b ENSGT00940000159916.m ENSGT00940000156870.b.b ENSGT00940000163149.a.a.a.a.a ENSGT00940000159839.d.b.d ENSGT00940000158686.b ENSGT00390000010968.a.g ENSGT00940000156976.gb.b ENSGT00940000160682.b.d ENSGT00940000157236.j.a ENSGT00980000199143 ENSGT01030000234648.a.b.a.a.b.cb.a.b #22 ENSGT01100000263518.B.b.b.a.a #26 ENSGT00390000010899.a.b.b.b.k.a.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b.f #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a.d.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.l #36 ENSGT00940000159477.c ENSGT00940000155529.A.e ENSGT00550000074844.jb.a ENSGT00940000157682.B.b.a Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00950000183002.A.a ENSGT00940000156626.hb ENSGT00990000203615.a.a.a.b.g ENSGT01050000244956.a.a.h ENSGT00940000160004.d.b ENSGT00940000159916.m ENSGT00940000156870.b.b ENSGT00940000163149.a.a.a.a.a ENSGT00940000159839.d.b.d ENSGT00940000158686.b ENSGT00390000010968.a.g ENSGT00940000156976.gb.b ENSGT00940000160682.b.d ENSGT00940000157236.j.a ENSGT00980000199143 ENSGT01030000234648.a.b.a.a.b.cb.a.b #22 ENSGT01100000263518.B.b.b.a.a #26 ENSGT00390000010899.a.b.b.b.k.a.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b.f #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a.d.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.l #36 ENSGT00940000159477.c ENSGT00940000155529.A.e ENSGT00550000074844.jb.a ENSGT00940000157682.B.b.a Coho salmon MODERN SPECIES 14 kcnj11 (ENSOKIG00005037185) mob2a (ENSOKIG00005037119) ENSOKIG00005037075 dusp8a (ENSOKIG00005037063) PTPN5 (ENSOKIG00005036490) ENSOKIG00005036354 ENSOKIG00005036329 CELSR1 (ENSOKIG00005035846) ENSOKIG00005035055 GRAMD4 (ENSOKIG00005034235) CERK (ENSOKIG00005034089) TAFA5 (ENSOKIG00005034053) ENSOKIG00005034042 brd1b (ENSOKIG00005034022) ENSOKIG00005034004 grm8b (ENSOKIG00005032392) #22 GPR37 (ENSOKIG00005032286) #26 spam1 (ENSOKIG00005032277) #27 HYAL4 (ENSOKIG00005032260) #28 ENSOKIG00005032255 hyal6 (ENSOKIG00005032246) ##28 WASL (ENSOKIG00005032174) #29 ENSOKIG00005032154 lmod2a (ENSOKIG00005032140) #30 ENSOKIG00005032117 #31 IQUB (ENSOKIG00005032040) #34 CADPS2 (ENSOKIG00005031265) #36 fezf1 (ENSOKIG00005031170) ENSOKIG00005031137 PTPRZ1 (ENSOKIG00005028335) ENSOKIG00005028191 Chinook salmon MODERN SPECIES 10 ush1c (ENSOTSG00005034397) abcc8 (ENSOTSG00005034023) kcnj11 (ENSOTSG00005034022) mob2a (ENSOTSG00005034021) dusp8a (ENSOTSG00005034020) PTPN5 (ENSOTSG00005033182) ENSOTSG00005033179 ENSOTSG00005033178 CELSR1 (ENSOTSG00005033177) ENSOTSG00005032626 GRAMD4 (ENSOTSG00005032436) CERK (ENSOTSG00005044270) TAFA5 (ENSOTSG00005044269) brd1b (ENSOTSG00005044268) ENSOTSG00005044267 grm8b (ENSOTSG00005043139) #22 GPR37 (ENSOTSG00005043101) #26 spam1 (ENSOTSG00005043099) #27 HYAL4 (ENSOTSG00005043098) #28 hyal6 (ENSOTSG00005043094) ##28 WASL (ENSOTSG00005043093) #29 lmod2a (ENSOTSG00005043091) #30 ASB15 (ENSOTSG00005043087) #31 ENSOTSG00005043085 #31 IQUB (ENSOTSG00005043082) #34 ENSOTSG00005043079 ENSOTSG00005043078 CADPS2 (ENSOTSG00005042929) #36 fezf1 (ENSOTSG00005042921) PTPRZ1 (ENSOTSG00005041692) dldh (ENSOTSG00005041612) Rainbow trout MODERN SPECIES 11 ENSOMYG00000040235 ENSOMYG00000055046 ENSOMYG00000039606 ENSOMYG00000058359 CELSR1 (ENSOMYG00000040475) ENSOMYG00000064441 ENSOMYG00000040826 GRAMD4 (ENSOMYG00000041473) ENSOMYG00000069330 ENSOMYG00000066486 CERK (ENSOMYG00000041556) TAFA5 (ENSOMYG00000041608) ENSOMYG00000050894 BRD1 (ENSOMYG00000041624) ENSOMYG00000041637 grm8b (ENSOMYG00000041728) #22 ENSOMYG00000042903 #26 spam1 (ENSOMYG00000042907) #27 HYAL4 (ENSOMYG00000042113) #28 hyal6 (ENSOMYG00000042916) ##28 ENSOMYG00000042922 #29 lmod2a (ENSOMYG00000042938) #30 ENSOMYG00000042939 IQUB (ENSOMYG00000042943) #34 CADPS2 (ENSOMYG00000043456) #36 fezf1 (ENSOMYG00000046419) PTPRZ1 (ENSOMYG00000046529) ENSOMYG00000062994 ENSOMYG00000072513 ENSOMYG00000046768 ENSOMYG00000046847 Salmo ANCESTRAL SPECIES 36 ENSGT00950000183002.A.a ENSGT00940000156626.hb ENSGT00990000203615.a.a.a.b.g ENSGT01050000244956.a.a.h ENSGT00940000160004.d.b ENSGT00940000159916.m ENSGT00940000156870.b.b ENSGT00940000163149.a.a.a.a.a ENSGT00940000159839.d.b.d ENSGT00940000158686.b ENSGT00390000010968.a.g ENSGT00940000160928.n.a.j ENSGT00940000156976.gb.b ENSGT00940000160682.b.c.b.b.a ENSGT00940000157236.j.a ENSGT01030000234648.a.b.a.a.b.cb.a.b #22 ENSGT01100000263518.B.b.b.a.a #26 ENSGT01020000230364.a.a.b.b.f #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a.d.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT00590000083094.a.b.l #36 ENSGT00940000159477.c ENSGT00940000155529.A.e ENSGT00550000074844.jb.a ENSGT00950000183052.b.c.b.b.a.a.b.b ENSGT00940000157682.B.b.a ENSGT00940000160974.b.c.g.a Atlantic salmon MODERN SPECIES 1 kcnj11 (ENSSSAG00000074969) mob2a (ENSSSAG00000074973) dusp8a (ENSSSAG00000074993) ENSSSAG00000084787 ENSSSAG00000075470 CELSR1 (ENSSSAG00000075568) ENSSSAG00000076396 GRAMD4 (ENSSSAG00000077579) ENSSSAG00000117144 ENSSSAG00000096263 ENSSSAG00000087650 CERK (ENSSSAG00000077692) TAFA5 (ENSSSAG00000096192) ENSSSAG00000093214 BRD1 (ENSSSAG00000077758) ENSSSAG00000077825 #22 ENSSSAG00000116085 #26 HYAL4 (ENSSSAG00000078037) #28 hyal6 (ENSSSAG00000078041) ##28 wasl (ENSSSAG00000078048) #29 lmod2 (ENSSSAG00000078108) #30 IQUB (ENSSSAG00000078117) #34 CADPS2 (ENSSSAG00000078300) #36 ENSSSAG00000109161 fezf1 (ENSSSAG00000080179) ptprz1 (ENSSSAG00000080236) ENSSSAG00000080505 ENSSSAG00000112377 ENSSSAG00000080540 drd4a (ENSSSAG00000080543) ENSSSAG00000080545 River trout MODERN SPECIES 37 kcnj11 (ENSSTUG00000016295) mob2a (ENSSTUG00000016250) dusp8a (ENSSTUG00000016232) PTPN5 (ENSSTUG00000015483) ENSSTUG00000015302 ENSSTUG00000015295 ENSSTUG00000013937 ENSSTUG00000011726 AP1S1 (ENSSTUG00000011641) GRAMD4 (ENSSTUG00000011304) ENSSTUG00000011245 CERK (ENSSTUG00000011216) ENSSTUG00000011205 TAFA5 (ENSSTUG00000011200) brd1b (ENSSTUG00000011114) grm8b (ENSSTUG00000010562) #22 GPR37 (ENSSTUG00000010524) #26 spam1 (ENSSTUG00000010486) #27 HYAL4 (ENSSTUG00000010474) #28 hyal6 (ENSSTUG00000010465) ##28 ENSSTUG00000010453 lmod2a (ENSSTUG00000010448) #30 ASB15 (ENSSTUG00000010383) #31 ENSSTUG00000010308 #31 IQUB (ENSSTUG00000010187) #34 CADPS2 (ENSSTUG00000010148) #36 fezf1 (ENSSTUG00000010110) dldh (ENSSTUG00000009461) ENSSTUG00000009267 ENSSTUG00000009265 drd4a (ENSSTUG00000009260) Northern pike MODERN SPECIES 18 ENSELUG00000017450 ENSELUG00000017422 ENSELUG00000032644 ENSELUG00000017387 gtse1 (ENSELUG00000017209) atp2b1b (ENSELUG00000017189) GRAMD4 (ENSELUG00000017143) CERK (ENSELUG00000017084) ENSELUG00000017048 ENSELUG00000027454 TAFA5 (ENSELUG00000016999) brd1b (ENSELUG00000016956) pim3 (ENSELUG00000016851) ENSELUG00000016829 acot19 (ENSELUG00000016811) grm8b (ENSELUG00000016759) #22 ENSELUG00000033983 ENSELUG00000026505 pot1 (ENSELUG00000005339) #24 GPR37 (ENSELUG00000005367) #26 SPAM1 (ENSELUG00000005386) #27 spam1 (ENSELUG00000005438) #27 spam1 (ENSELUG00000005416) #27 HYAL4 (ENSELUG00000005451) #28 hyal6 (ENSELUG00000005481) ##28 WASL (ENSELUG00000005508) #29 lmod2a (ENSELUG00000005530) #30 ASB15 (ENSELUG00000005548) #31 IQUB (ENSELUG00000001465) #34 slc13a1 (ENSELUG00000001491) #35 CADPS2 (ENSELUG00000005691) #36 Otomorpha ANCESTRAL SPECIES 230 ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Clupeiformes ANCESTRAL SPECIES 133 ENSGT00940000158267 ENSGT00390000017625.l ENSGT00390000008092.b.a.a ENSGT00390000009453.fb.a ENSGT00940000159754.b ENSGT00390000015299.a.a.b ENSGT00390000007623.d ENSGT00940000159545 ENSGT00940000157682.B.b ENSGT00940000157236.j ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.a.b #27 ENSGT01020000230364.a.a.b.a.y.a.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A Denticle herring MODERN SPECIES 8 lrrk2 (ENSDCDG00000028980) CLPX (ENSDCDG00000028815) ENSDCDG00000028811 prc1a (ENSDCDG00000028798) ENSDCDG00000028795 ENSDCDG00000028794 FIBIN (ENSDCDG00000028792) slc5a12 (ENSDCDG00000028571) ENSDCDG00000028563 brd1b (ENSDCDG00000028557) acot19 (ENSDCDG00000028554) lamb4 (ENSDCDG00000023768) lamb1a (ENSDCDG00000022152) dldh (ENSDCDG00000022101) ENSDCDG00000024018 grm8b (ENSDCDG00000023416) #22 ENSDCDG00000023392 pot1 (ENSDCDG00000023389) #24 GPR37 (ENSDCDG00000023367) #26 spam1 (ENSDCDG00000023340) #27 spam1 (ENSDCDG00000023336) #27 HYAL4 (ENSDCDG00000023338) #28 hyal6 (ENSDCDG00000023332) ##28 wasla (ENSDCDG00000023287) #29 ASB15 (ENSDCDG00000023279) #31 ASB15 (ENSDCDG00000023275) #31 IQUB (ENSDCDG00000023272) #34 slc13a1 (ENSDCDG00000023184) #35 CADPS2 (ENSDCDG00000022733) #36 fezf1 (ENSDCDG00000022687) aass (ENSDCDG00000022576) Atlantic herring MODERN SPECIES 19 CLPX (ENSCHAG00000013199) ENSCHAG00000014101 PRC1 (ENSCHAG00000014111) ENSCHAG00000014370 ENSCHAG00000014389 FIBIN (ENSCHAG00000014398) slc5a12 (ENSCHAG00000014424) ENSCHAG00000014667 brd1b (ENSCHAG00000014698) acot19 (ENSCHAG00000014744) lamb4 (ENSCHAG00000014816) lamb1a (ENSCHAG00000015221) dldh (ENSCHAG00000020139) ENSCHAG00000020490 ENSCHAG00000020502 grm8b (ENSCHAG00000020543) #22 ENSCHAG00000020581 pot1 (ENSCHAG00000020602) #24 GPR37 (ENSCHAG00000020614) #26 SPAM1 (ENSCHAG00000020620) #27 spam1 (ENSCHAG00000020703) #27 spam1 (ENSCHAG00000020853) #27 HYAL4 (ENSCHAG00000020859) #28 hyal6 (ENSCHAG00000020868) ##28 ENSCHAG00000020886 WASHC4 (ENSCHAG00000020949) cnot2 (ENSCHAG00000021062) ENSCHAG00000021585 fnbp4 (ENSCHAG00000021617) agbl2 (ENSCHAG00000021740) tmem17 (ENSCHAG00000021815) Otophysi ANCESTRAL SPECIES 13 ENSGT00940000163963 ENSGT00390000008240 ENSGT00940000158943.d ENSGT00390000018400.d ENSGT00660000097073 ENSGT00950000183129.a ENSGT00940000157577.c.a ENSGT00970000197481 ENSGT00390000015967.u ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Characiphysae ANCESTRAL SPECIES 6 ENSGT00940000163963 ENSGT00390000008240 ENSGT00940000158943.d ENSGT00390000018400.d ENSGT00660000097073 ENSGT00950000183129.a ENSGT00940000157577.c.a ENSGT00970000197481 ENSGT00390000015967.u ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.b #27 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Channel catfish MODERN SPECIES 5 duox1 (ENSIPUG00000020351) duoxa1 (ENSIPUG00000020332) ENSIPUG00000020321 eif3ja (ENSIPUG00000020304) ENSIPUG00000020294 parp16 (ENSIPUG00000020282) scamp5 (ENSIPUG00000020251) ENSIPUG00000020242 ubl7a (ENSIPUG00000020209) acot19 (ENSIPUG00000020182) lamb4 (ENSIPUG00000020020) lamb1 (ENSIPUG00000019946) Dld (ENSIPUG00000019876) ENSIPUG00000019870 znf800 (ENSIPUG00000019861) #20 grm8b (ENSIPUG00000019840) #22 POT1 (ENSIPUG00000019786) #24 gpr37 (ENSIPUG00000019781) #26 spam1 (ENSIPUG00000019778) #27 spam1 (ENSIPUG00000019771) #27 SPAM1 (ENSIPUG00000019581) #27 spam1 (ENSIPUG00000019563) #27 hyal4 (ENSIPUG00000019556) #28 wasla (ENSIPUG00000019482) #29 ASB15 (ENSIPUG00000019454) #31 iqub (ENSIPUG00000019438) #34 slc13a1 (ENSIPUG00000019409) #35 cadps2 (ENSIPUG00000019001) #36 fezf1 (ENSIPUG00000018937) aass (ENSIPUG00000018877) PTPRZ1 (ENSIPUG00000018747) Characiphysae_b ANCESTRAL SPECIES 5 ENSGT00390000008240 ENSGT00940000158943.d ENSGT00390000018400.d ENSGT00660000097073 ENSGT00950000183129.a ENSGT00940000157577.c.a ENSGT00970000197481 ENSGT00910000144204.b.h ENSGT00390000015967.u ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.b #27 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Characoidei ANCESTRAL SPECIES 4 ENSGT00940000163963 ENSGT00390000008240 ENSGT00940000158943.d ENSGT00390000018400.d ENSGT00660000097073 ENSGT00950000183129.a ENSGT00940000157577.c.a ENSGT00910000144204.b.h ENSGT00390000015967.u ENSGT01010000222336.b.a.b.b ENSGT00940000162514 ENSGT00940000156003.l.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.z #27 ENSGT01020000230364.a.a.b.a.y.a.a.b #27 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00970000193473 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 Red-bellied piranha MODERN SPECIES 220 ENSPNAG00000017064 DUOXA2 (ENSPNAG00000017037) ENSPNAG00000017030 eif3ja (ENSPNAG00000017022) ENSPNAG00000016991 parp16 (ENSPNAG00000016973) scamp5a (ENSPNAG00000016963) ENSPNAG00000016952 ubl7a (ENSPNAG00000016945) acot19 (ENSPNAG00000016908) lamb4 (ENSPNAG00000016882) lamb1a (ENSPNAG00000016829) dldh (ENSPNAG00000016662) ENSPNAG00000016616 znf800a (ENSPNAG00000016603) #20 grm8b (ENSPNAG00000016593) #22 ENSPNAG00000016533 pot1 (ENSPNAG00000016527) #24 GPR37 (ENSPNAG00000016320) #26 SPAM1 (ENSPNAG00000016309) #27 spam1 (ENSPNAG00000016273) #27 HYAL4 (ENSPNAG00000016247) #28 hyal6 (ENSPNAG00000016237) ##28 ENSPNAG00000016227 ENSPNAG00000016152 ASB15 (ENSPNAG00000016139) #31 IQUB (ENSPNAG00000016080) #34 slc13a1 (ENSPNAG00000016055) #35 CADPS2 (ENSPNAG00000015965) #36 fezf1 (ENSPNAG00000015673) aass (ENSPNAG00000015642) Mexicana tetra MODERN SPECIES 23 ENSAMXG00000031014 ENSAMXG00000039680 eif3ja (ENSAMXG00000030386) ENSAMXG00000000749 parp16 (ENSAMXG00000037093) scamp5a (ENSAMXG00000039174) ENSAMXG00000041459 ubl7a (ENSAMXG00000029884) acot19 (ENSAMXG00000035728) lamb4 (ENSAMXG00000000803) lamb1a (ENSAMXG00000000835) dldh (ENSAMXG00000000866) ENSAMXG00000040711 ENSAMXG00000042115 #20 znf800a (ENSAMXG00000000870) #20 grm8b (ENSAMXG00000000876) #22 pot1 (ENSAMXG00000040644) #24 GPR37 (ENSAMXG00000034272) #26 ENSAMXG00000038321 SPAM1 (ENSAMXG00000000897) #27 ENSAMXG00000035446 #27 spam1 (ENSAMXG00000043742) #27 ENSAMXG00000041866 HYAL4 (ENSAMXG00000000899) #28 hyal6 (ENSAMXG00000032723) ##28 ENSAMXG00000000904 lmod2a (ENSAMXG00000000910) #30 ASB15 (ENSAMXG00000000912) #31 IQUB (ENSAMXG00000000913) #34 slc13a1 (ENSAMXG00000000919) #35 CADPS2 (ENSAMXG00000000923) #36 Electric eel MODERN SPECIES 372 ENSEEEG00000008592 DUOXA1 (ENSEEEG00000008626) ENSEEEG00000008629 eif3ja (ENSEEEG00000008632) parp16 (ENSEEEG00000008633) scamp5a (ENSEEEG00000008635) ENSEEEG00000008636 ubl7a (ENSEEEG00000008637) acot19 (ENSEEEG00000008640) lamb4 (ENSEEEG00000008657) lamb1a (ENSEEEG00000008698) dldh (ENSEEEG00000009082) ENSEEEG00000009210 znf800a (ENSEEEG00000009212) #20 grm8b (ENSEEEG00000009214) #22 pot1 (ENSEEEG00000009215) #24 hspa4a (ENSEEEG00000009226) rnf14 (ENSEEEG00000009986) endou2 (ENSEEEG00000009993) ndfip1l (ENSEEEG00000010001) Cyprinoidei ANCESTRAL SPECIES 49 ENSGT00940000160977.e.b ENSGT00940000157737 ENSGT00940000153424.a.a.c.a.a ENSGT00940000164936.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000168688 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00550000074844 ENSGT00940000154487.B ENSGT00390000008140.k.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.a.y.a.a.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT01020000230364.a.b ##28 ENSGT00390000006290 ENSGT00940000156567.a.b #30 ENSGT00940000157073.a.b #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a #35 ENSGT00590000083094.a.b #36 ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.A Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 135 ENSGT00940000155363.v.b.a ENSGT00940000160380.r ENSGT00950000182989.A.a.j ENSGT00390000006479.h ENSGT00940000157327.o.a.b ENSGT00940000160977.e.b.b ENSGT00940000157737.e ENSGT00940000153424.a.a.c.b ENSGT00940000164936.b.c ENSGT00390000003748.d ENSGT00940000157850.a ENSGT00390000015516.p ENSGT00940000158358.a.a ENSGT00550000074844.lb.b ENSGT00390000008140.k.b.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a.c #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.b.g #28 ENSGT01020000230364.a.b.a ##28 ENSGT00390000006290.`b ENSGT00730000110895.b.a.o.a.i.b #29 ENSGT00940000156567.a.b.d #30 ENSGT00940000157073.a.b.c #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a.i #35 ENSGT01030000234550.a.a.d.a.a.j #35 ENSGT00590000083094.a.b.y #36 ENSGT00940000159477.f ENSGT00390000013249.d Goldfish MODERN SPECIES 45 idh3a (ENSCARG00000068321) lrrc61 (ENSCARG00000068295) cib2 (ENSCARG00000068281) SH2D7 (ENSCARG00000068273) ENSCARG00000068267 TBC1D2B (ENSCARG00000068236) DAPK2 (ENSCARG00000068167) ENSCARG00000068159 ENSCARG00000068156 fbxl22 (ENSCARG00000068150) usp3 (ENSCARG00000068131) commd4 (ENSCARG00000068094) sema7a (ENSCARG00000068084) dldh (ENSCARG00000067340) znf800a (ENSCARG00000067258) #20 grm8b (ENSCARG00000067196) #22 GPR37 (ENSCARG00000067187) #26 HYAL4 (ENSCARG00000067183) #28 hyal6 (ENSCARG00000067179) ##28 ENSCARG00000067163 wasla (ENSCARG00000067078) #29 lmod2a (ENSCARG00000067062) #30 ASB15 (ENSCARG00000067054) #31 ASB15 (ENSCARG00000067048) #31 IQUB (ENSCARG00000067008) #34 CADPS2 (ENSCARG00000062728) #36 fezf1 (ENSCARG00000062475) aass (ENSCARG00000061614) PTPRZ1 (ENSCARG00000057229) SLC15A5 (ENSCARG00000057107) fnbp4 (ENSCARG00000057019) Cyprininae_a ANCESTRAL SPECIES 361 ENSGT00940000155363.v.b.a ENSGT00940000160380.r ENSGT00950000182989.A.a.j ENSGT00390000006479.h ENSGT00940000157327.o.a.b ENSGT00940000160977.e.b.b ENSGT00940000157737.e ENSGT00940000153424.a.a.c.a.a.b ENSGT00940000164936.b.c ENSGT00390000003748.d ENSGT00940000157850.a ENSGT00390000015516.p ENSGT00940000158358.a.a ENSGT00550000074844.lb.b ENSGT00390000008140.k.b.b #20 ENSGT01030000234648.a.b.a.a.b.cb.a.c #22 Common carp reference MODERN SPECIES 33 cib2 (ENSCCRG00000017221) ENSCCRG00000003467 TBC1D2B (ENSCCRG00000079712) ENSCCRG00000017232 ENSCCRG00000068480 fbxl22 (ENSCCRG00000071041) ENSCCRG00000049198 ENSCCRG00000064396 usp3 (ENSCCRG00000062678) ENSCCRG00000057867 commd4 (ENSCCRG00000058057) ENSCCRG00000027470 sema7a (ENSCCRG00000060533) dldh (ENSCCRG00000062986) znf800a (ENSCCRG00000049169) #20 grm8b (ENSCCRG00000019516) #22 GPR37 (ENSCCRG00000052162) #26 HYAL4 (ENSCCRG00000067499) #28 hyal6 (ENSCCRG00000016409) ##28 ENSCCRG00000016416 wasla (ENSCCRG00000005469) #29 lmod2a (ENSCCRG00000070098) #30 ASB15 (ENSCCRG00000062766) #31 IQUB (ENSCCRG00000005412) #34 ASB15 (ENSCCRG00000005428) #31 slc13a1 (ENSCCRG00000005369) #35 CADPS2 (ENSCCRG00000060485) #36 fezf1 (ENSCCRG00000044220) aass (ENSCCRG00000044381) PTPRZ1 (ENSCCRG00000013992) ENSCCRG00000017267 Golden-line barbel MODERN SPECIES 30 lrrc61 (ENSSGRG00000042715) cib2 (ENSSGRG00000042716) ENSSGRG00000042718 TBC1D2B (ENSSGRG00000042721) ENSSGRG00000042722 ENSSGRG00000042723 usp3 (ENSSGRG00000042747) ENSSGRG00000043496 ENSSGRG00000043497 MAN2C1 (ENSSGRG00000043527) ENSSGRG00000043586 commd4 (ENSSGRG00000043587) sema7a (ENSSGRG00000043594) dldh (ENSSGRG00000043599) znf800a (ENSSGRG00000043670) #20 grm8b (ENSSGRG00000043671) #22 pot1 (ENSSGRG00000043676) #24 HYAL4 (ENSSGRG00000043690) #28 hyal6 (ENSSGRG00000043691) ##28 hyal6 (ENSSGRG00000043692) ##28 ENSSGRG00000043694 wasla (ENSSGRG00000043695) #29 lmod2a (ENSSGRG00000043696) #30 ENSSGRG00000043698 #31 ENSSGRG00000043699 ASB15 (ENSSGRG00000043701) #31 IQUB (ENSSGRG00000043702) #34 slc13a1 (ENSSGRG00000043709) #35 CADPS2 (ENSSGRG00000043715) #36 aass (ENSSGRG00000043805) PTPRZ1 (ENSSGRG00000045184) Cyprininae ANCESTRAL SPECIES 388 ENSGT00940000157737.f ENSGT00940000153424.a.a.c.a.a.a ENSGT00940000164936.b.d ENSGT00390000003748.c ENSGT00940000157850.b ENSGT00940000168688 ENSGT00940000159282.d ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.o ENSGT00940000158358.a.b ENSGT00550000074844.lb.a ENSGT00550000074844.mb ENSGT00940000154487.B ENSGT00390000008140.k.b.a #20 ENSGT01030000234648.a.b.a.a.b.cb.a.d #22 Goldfish MODERN SPECIES 17 ENSCARG00000065332 ENSCARG00000065296 ENSCARG00000065283 fbxl22 (ENSCARG00000065278) usp3 (ENSCARG00000063894) ENSCARG00000063810 CA12 (ENSCARG00000063767) CA12 (ENSCARG00000063706) ENSCARG00000063605 neil1 (ENSCARG00000063580) commd4 (ENSCARG00000063505) sema7a (ENSCARG00000063473) dldh (ENSCARG00000063076) ENSCARG00000063032 znf800a (ENSCARG00000063017) #20 grm8b (ENSCARG00000062791) #22 ENSCARG00000062780 ENSCARG00000062775 vps13a (ENSCARG00000062609) vps13a (ENSCARG00000059454) ENSCARG00000059343 CABIN1 (ENSCARG00000056207) tbx16 (ENSCARG00000056085) npy8br (ENSCARG00000056067) kctd9a (ENSCARG00000055838) ENSCARG00000055832 ankrd39 (ENSCARG00000055818) PRR5L (ENSCARG00000055732) api5 (ENSCARG00000055543) hsd17b12a (ENSCARG00000055182) alkbh3 (ENSCARG00000055154) Cyprininae_a ANCESTRAL SPECIES 16 ENSGT00940000160977.e.b.a ENSGT00940000157737.f ENSGT00940000153424.a.a.c.a.a.a ENSGT00940000164936.b.d ENSGT00390000003748.c ENSGT00940000157850.b ENSGT00940000168688 ENSGT00940000159282.d ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.o ENSGT00940000158358.a.b ENSGT00550000074844.lb.a ENSGT00940000154487.B ENSGT00390000008140.k.b.a #20 ENSGT01030000234648.a.b.a.a.b.cb.a.d #22 ENSGT00390000018285 #24 ENSGT01100000263518.B.b.b.a #26 ENSGT01020000230364.a.a.b.b.g #28 ENSGT01020000230364.a.b.a ##28 ENSGT00390000006290.`b ENSGT00730000110895.b.a.o.a.i.b #29 ENSGT00940000156567.a.b.d #30 ENSGT00940000157073.a.b.c #31 ENSGT00940000157073.a.a #31 ENSGT00390000014326 #34 ENSGT01030000234550.a.a.d.a.a.i #35 ENSGT01030000234550.a.a.d.a.a.j #35 ENSGT00590000083094.a.b.y #36 ENSGT00940000159477.f ENSGT00390000013249.d Common carp reference MODERN SPECIES 37 cib2 (ENSCCRG00000079843) SH2D7 (ENSCCRG00000017223) TBC1D2B (ENSCCRG00000017225) ENSCCRG00000075352 ENSCCRG00000060964 fbxl22 (ENSCCRG00000079012) usp3 (ENSCCRG00000070057) CA12 (ENSCCRG00000082665) neil1 (ENSCCRG00000042035) MAN2C1 (ENSCCRG00000042025) commd4 (ENSCCRG00000027466) sema7a (ENSCCRG00000042058) dldh (ENSCCRG00000054504) ENSCCRG00000044951 znf800a (ENSCCRG00000068099) #20 grm8b (ENSCCRG00000019553) #22 pot1 (ENSCCRG00000026331) #24 spam1 (ENSCCRG00000026316) #27 HYAL4 (ENSCCRG00000060285) #28 hyal6 (ENSCCRG00000026302) ##28 ENSCCRG00000026294 lmod2a (ENSCCRG00000059769) #30 ASB15 (ENSCCRG00000005440) #31 WASL (ENSCCRG00000080087) #29 slc13a1 (ENSCCRG00000070088) #35 ENSCCRG00000058681 CADPS2 (ENSCCRG00000078782) #36 fezf1 (ENSCCRG00000079010) aass (ENSCCRG00000026765) ENSCCRG00000049037 PTPRZ1 (ENSCCRG00000048958) Golden-line barbel MODERN SPECIES 256 cib2 (ENSSGRG00000021471) SH2D7 (ENSSGRG00000021469) TBC1D2B (ENSSGRG00000021466) ENSSGRG00000021183 fbxl22 (ENSSGRG00000021179) usp3 (ENSSGRG00000020452) ENSSGRG00000020439 CA12 (ENSSGRG00000020288) ENSSGRG00000020278 neil1 (ENSSGRG00000020277) commd4 (ENSSGRG00000020231) sema7a (ENSSGRG00000020226) dldh (ENSSGRG00000020161) ENSSGRG00000020160 znf800a (ENSSGRG00000020159) #20 grm8b (ENSSGRG00000020158) #22 pot1 (ENSSGRG00000020157) #24 GPR37 (ENSSGRG00000020138) #26 spam1 (ENSSGRG00000020136) #27 HYAL4 (ENSSGRG00000020135) #28 ENSSGRG00000020134 wasla (ENSSGRG00000020025) #29 lmod2a (ENSSGRG00000020020) #30 ASB15 (ENSSGRG00000020017) #31 ENSSGRG00000020014 ENSSGRG00000020013 #31 ENSSGRG00000020012 #34 slc13a1 (ENSSGRG00000020009) #35 CADPS2 (ENSSGRG00000016978) #36 fezf1 (ENSSGRG00000016928) aass (ENSSGRG00000016927) Zebrafish MODERN SPECIES 17 ACSBG1 (ENSDARG00000062077) DAPK2 (ENSDARG00000103666) ENSDARG00000088171 fbxl22 (ENSDARG00000096995) usp3 (ENSDARG00000045641) si:dkeyp-73b11.8 (ENSDARG00000090185) CA12 (ENSDARG00000045644) MAN2C1 (ENSDARG00000079835) neil1 (ENSDARG00000018061) commd4 (ENSDARG00000061946) sema7a (ENSDARG00000078707) dldh (ENSDARG00000008785) ENSDARG00000092825 ENSDARG00000097622 znf800a (ENSDARG00000004594) #20 grm8b (ENSDARG00000076508) #22 pot1 (ENSDARG00000079915) #24 GPR37 (ENSDARG00000074563) #26 spam1 (ENSDARG00000004199) #27 HYAL4 (ENSDARG00000051823) #28 hyal6 (ENSDARG00000038166) ##28 ENSDARG00000089227 zgc:153935 (ENSDARG00000036888) wasla (ENSDARG00000014113) #29 lmod2a (ENSDARG00000045634) #30 ASB15 (ENSDARG00000045633) #31 IQUB (ENSDARG00000061899) #34 slc13a1 (ENSDARG00000045638) #35 ENSDARG00000013312 #36 fezf1 (ENSDARG00000010270) aass (ENSDARG00000051816) Clupeocephala ANCESTRAL SPECIES 30 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728.o ENSGT00510000048519.b ENSGT00940000156628.d ENSGT01080000257336.b.e.b.a.a.c ENSGT00390000011863.d.a.b ENSGT01050000244841.A.b.b.a.b ENSGT00390000011239.i ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00970000193473 ENSGT00940000159825.b ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 196 ENSGT01050000244841.A.b.b.a.b ENSGT00390000011239.i ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.l #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a.b #27 ENSGT00970000193473 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 Clupeiformes ANCESTRAL SPECIES 110 ENSGT00390000011239.i ENSGT00940000158160 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a.b #27 ENSGT00970000193473 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00940000158039.h ENSGT00390000004044 ENSGT00940000159379 ENSGT00940000153372.A.f ENSGT00940000153567.a.a.b.b.a Denticle herring MODERN SPECIES 6 PARP11 (ENSDCDG00000033381) ENSDCDG00000033373 prmt8b (ENSDCDG00000033171) tspan11 (ENSDCDG00000033152) sema3aa (ENSDCDG00000033050) ENSDCDG00000032952 cacna2d1a (ENSDCDG00000030409) ENSDCDG00000030338 hgfa (ENSDCDG00000030326) ENSDCDG00000030317 pik3cg (ENSDCDG00000030311) NAMPT (ENSDCDG00000029144) SYPL1 (ENSDCDG00000029118) ATXN7L1 (ENSDCDG00000029116) znf800a (ENSDCDG00000029115) #20 GRM8 (ENSDCDG00000027973) #22 gpr37b (ENSDCDG00000027949) #26 TMEM229A (ENSDCDG00000027946) WASL (ENSDCDG00000027896) #29 LMOD2 (ENSDCDG00000027894) #30 asb15b (ENSDCDG00000027890) #31 ndufa5 (ENSDCDG00000027889) #32 PTPRZ1 (ENSDCDG00000025854) KDM7A (ENSDCDG00000025799) ndufb2 (ENSDCDG00000025796) SEMA3C (ENSDCDG00000021865) cd36 (ENSDCDG00000021645) gnai1 (ENSDCDG00000021632) magi2a (ENSDCDG00000021134) si:dkey-97m3.1 (ENSDCDG00000032411) hcfc2 (ENSDCDG00000032403) Atlantic herring MODERN SPECIES 7 COG5 (ENSCHAG00000003909) gpr22a (ENSCHAG00000004711) dus4l (ENSCHAG00000004743) bcap29 (ENSCHAG00000004827) slco1c1 (ENSCHAG00000004880) PDE3A (ENSCHAG00000005408) aebp2 (ENSCHAG00000005528) plekha5 (ENSCHAG00000005592) ENSCHAG00000006655 ENSCHAG00000006661 ENSCHAG00000006688 PRKAR2B (ENSCHAG00000007917) pik3cg (ENSCHAG00000008000) NAMPT (ENSCHAG00000008180) znf800a (ENSCHAG00000009735) #20 GRM8 (ENSCHAG00000009841) #22 ENSCHAG00000010299 ENSCHAG00000010306 gpr37b (ENSCHAG00000010308) #26 TMEM229A (ENSCHAG00000010330) ENSCHAG00000010361 #27 ENSCHAG00000010454 ndufa5 (ENSCHAG00000010462) #32 ENSCHAG00000010584 KDM7A (ENSCHAG00000012059) ndufb2 (ENSCHAG00000012289) ENSCHAG00000012299 SEMA3C (ENSCHAG00000012375) cd36 (ENSCHAG00000013260) gnai1 (ENSCHAG00000013538) magi2a (ENSCHAG00000013742) Otophysi ANCESTRAL SPECIES 172 ENSGT01050000244841.A.b.b.a.a ENSGT00550000074907 ENSGT00390000011863.d.a.a ENSGT01080000257336.b.e.b.a.a.d ENSGT00940000156628.c ENSGT00510000048519.a ENSGT00940000155728.p ENSGT00940000165209 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000155765.s.b ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.l #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000158094 Characiphysae ANCESTRAL SPECIES 62 ENSGT00940000155728.p ENSGT00510000048519.a ENSGT00940000156628.c ENSGT01080000257336.b.e.b.a.a.d ENSGT00390000011863.d.a.a ENSGT00550000074907 ENSGT00940000166951 ENSGT00390000004586 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000155765.s.b ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000157777 ENSGT00940000157998 Channel catfish MODERN SPECIES 10 ccdc42 (ENSIPUG00000015971) slc13a4 (ENSIPUG00000015941) ##35 coa6 (ENSIPUG00000015928) PTPRZ1 (ENSIPUG00000015816) NDUFA5 (ENSIPUG00000015789) #32 asb15b (ENSIPUG00000015780) #31 lmod2 (ENSIPUG00000015777) #30 ENSIPUG00000015753 gpr37b (ENSIPUG00000015746) #26 ENSIPUG00000015729 ENSIPUG00000015713 ENSIPUG00000015705 ENSIPUG00000015691 ENSIPUG00000015682 ENSIPUG00000015604 GRM8 (ENSIPUG00000015581) #22 pphln1 (ENSIPUG00000015505) ENSIPUG00000015490 cacna1c (ENSIPUG00000015419) mrpl42 (ENSIPUG00000015395) ENSIPUG00000015390 ENSIPUG00000015386 ENSIPUG00000015382 ENSIPUG00000015373 ENSIPUG00000015359 ENSIPUG00000015353 lrtm2 (ENSIPUG00000015332) ENSIPUG00000015319 ENSIPUG00000015300 ##22 ZNF800 (ENSIPUG00000015296) #20 ENSIPUG00000015291 Characiphysae_b ANCESTRAL SPECIES 106 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000155765.s.b ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000157777 ENSGT00940000157998 Characoidei ANCESTRAL SPECIES 386 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 Red-bellied piranha MODERN SPECIES 805 ENSPNAG00000022174 #22 Mexicana tetra MODERN SPECIES 68 ENSAMXG00000014743 ENSAMXG00000014764 ENSAMXG00000035727 ENSAMXG00000035117 plekha5 (ENSAMXG00000032026) pik3cg (ENSAMXG00000004209) NAMPT (ENSAMXG00000037569) SYPL1 (ENSAMXG00000041686) ENSAMXG00000029343 ZNF800 (ENSAMXG00000032507) #20 ENSAMXG00000041912 #22 Electric eel MODERN SPECIES 110 ENSEEEG00000019896 ENSEEEG00000019898 pik3cg (ENSEEEG00000019947) NAMPT (ENSEEEG00000019966) SYPL1 (ENSEEEG00000020327) ENSEEEG00000020328 ZNF800 (ENSEEEG00000020329) #20 GRM8 (ENSEEEG00000020332) #22 ENSEEEG00000020336 gpr37b (ENSEEEG00000020338) #26 TMEM229A (ENSEEEG00000020342) waslb (ENSEEEG00000020345) #29 LMOD2 (ENSEEEG00000020347) #30 asb15b (ENSEEEG00000020349) #31 ndufa5 (ENSEEEG00000020352) #32 ENSEEEG00000020359 coa6 (ENSEEEG00000020365) slc13a4 (ENSEEEG00000020366) ##35 zgc:162331 (ENSEEEG00000020369) ENSEEEG00000020370 ssbp1 (ENSEEEG00000020375) creb3l2 (ENSEEEG00000020384) BEST3 (ENSEEEG00000020390) Cyprinoidei ANCESTRAL SPECIES 62 ENSGT00390000004586 ENSGT00550000074907 ENSGT00390000011863.d.a.a ENSGT01080000257336.b.e.b.a.a.d ENSGT00940000156628.c ENSGT00510000048519.a ENSGT00940000155728.p ENSGT00940000165209 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000155765.s.b ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.l #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ##35 ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000158094 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 376 ENSGT01030000234648.a.b.a.a.b.cb.b.a.a #22 ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a.j.b #29 ENSGT00940000156567.a.a.c.a.a #30 ENSGT00940000157073.b.a #31 ENSGT00390000008099.fc #32 ENSGT00940000155529.B.a ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b.b ##35 ENSGT00940000166253.a.b ENSGT00390000002796.gb.a.b ENSGT00390000002796.gb.a.a ENSGT00940000157659.a ENSGT00940000158094.s Goldfish DUPLICATION Goldfish MODERN SPECIES 21 ENSCARG00000061642 ENSCARG00000061615 plekha5 (ENSCARG00000061281) aebp2 (ENSCARG00000061141) PDE3A (ENSCARG00000061040) slco1c1 (ENSCARG00000060817) bcap29 (ENSCARG00000060796) gpr22a (ENSCARG00000060783) ENSCARG00000060776 mapre3b (ENSCARG00000060758) agbl5 (ENSCARG00000060620) ost4 (ENSCARG00000060604) mrps10 (ENSCARG00000060588) tulp4a (ENSCARG00000060522) tmem181 (ENSCARG00000060459) GRM8 (ENSCARG00000060371) #22 ENSCARG00000060354 gpr37b (ENSCARG00000060337) #26 TMEM229A (ENSCARG00000060320) waslb (ENSCARG00000060224) #29 ENSCARG00000060202 #30 asb15b (ENSCARG00000060176) #31 ndufa5 (ENSCARG00000060170) #32 ENSCARG00000059001 slc13a4 (ENSCARG00000058885) ##35 zgc:162331 (ENSCARG00000058857) ENSCARG00000058832 ssbp1 (ENSCARG00000058814) creb3l2 (ENSCARG00000058549) ENSCARG00000057659 ENSCARG00000057647 Goldfish MODERN SPECIES 2143 GRM8 (ENSCARG00000065346) #22 ENSCARG00000065338 Cyprininae_a ANCESTRAL SPECIES 176 ENSGT00390000011863.d.a.a.a ENSGT01080000257336.b.e.b.a.a.d.b ENSGT00940000156628.c.d ENSGT00510000048519.a.f.a ENSGT00940000155728.p.c ENSGT00940000165209.c ENSGT00940000154471.a.b.a.b.u.b.a ENSGT00940000155765.s.b.a ENSGT00940000156858.d ENSGT00940000153456.b.a.v ENSGT01030000234637.a.b.k ENSGT00940000158612.g ENSGT00390000008140.l.a.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a.b #22 ENSGT01100000263518.B.b.b.b.e #26 ENSGT01030000234648.a.b.a.a.b.cb.b.a.a #22 ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f #26 ENSGT00390000010899.a.b.b.b.g ENSGT00970000193473 ENSGT00940000156567.a.a.c.b #30 ENSGT00730000110895.b.a.o.a.j.a #29 ENSGT00940000156567.a.a.c.a.b #30 ENSGT00940000157073.b.b #31 ENSGT00390000008099.ec #32 ENSGT00940000155529.B.b ENSGT01030000234550.a.a.d.a.b.a ##35 ENSGT00940000166253.a.a ENSGT00390000018424 ENSGT00390000002796.gb.a.b ENSGT00940000157659.b Golden-line barbel MODERN SPECIES 32 GRM8 (ENSSGRG00000029272) #22 ENSSGRG00000029273 TMEM229A (ENSSGRG00000029274) waslb (ENSSGRG00000029275) #29 LMOD2 (ENSSGRG00000029281) #30 asb15b (ENSSGRG00000029283) #31 ndufa5 (ENSSGRG00000029286) #32 slc13a4 (ENSSGRG00000029307) ##35 zgc:162331 (ENSSGRG00000029317) ENSSGRG00000029324 ssbp1 (ENSSGRG00000029326) creb3l2 (ENSSGRG00000029329) ENSSGRG00000029332 ENSSGRG00000029415 RASSF3 (ENSSGRG00000029416) gnsa (ENSSGRG00000029417) Common carp reference MODERN SPECIES 36 COG5 (ENSCCRG00000036890) dus4l (ENSCCRG00000061962) bcap29 (ENSCCRG00000059372) slco1c1 (ENSCCRG00000012631) PDE3A (ENSCCRG00000021749) aebp2 (ENSCCRG00000068042) plekha5 (ENSCCRG00000062976) ENSCCRG00000018493 ENSCCRG00000018528 ENSCCRG00000021757 pik3cg (ENSCCRG00000033481) NAMPT (ENSCCRG00000018383) SYPL1 (ENSCCRG00000072438) ENSCCRG00000081390 znf800b (ENSCCRG00000068618) #20 GRM8 (ENSCCRG00000062488) #22 ENSCCRG00000064462 ENSCCRG00000011690 gpr37b (ENSCCRG00000011699) #26 ENSCCRG00000076753 waslb (ENSCCRG00000038750) #29 ENSCCRG00000038747 #30 asb15b (ENSCCRG00000082179) #31 ndufa5 (ENSCCRG00000070290) #32 ENSCCRG00000010636 ENSCCRG00000001759 zgc:162331 (ENSCCRG00000049880) slc13a4 (ENSCCRG00000049879) ##35 ENSCCRG00000010596 ssbp1 (ENSCCRG00000010595) creb3l2 (ENSCCRG00000010591) Cyprininae ANCESTRAL SPECIES 336 ENSGT00390000004586 ENSGT00550000074907.i ENSGT00390000011863.d.a.a.a ENSGT01080000257336.b.e.b.a.a.d.b ENSGT00940000156628.c.d ENSGT00510000048519.a.f ENSGT00940000155728.p.c ENSGT00940000165209.c ENSGT00940000154471.a.b.a.b.u.b.a ENSGT00940000155765.s.b.a ENSGT00940000156858.d ENSGT00940000153456.b.a.v ENSGT01030000234637.a.b.k ENSGT00940000158612.g ENSGT00390000008140.l.a.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a.b #22 ENSGT00940000163911.a.b.o ENSGT00970000193473 ENSGT00940000156567.a.a.c.b #30 Goldfish DUPLICATION Goldfish MODERN SPECIES 2357 GRM8 (ENSCARG00000041263) #22 ENSCARG00000041251 Goldfish MODERN SPECIES 33 asb15b (ENSCARG00000020245) #31 LMOD2 (ENSCARG00000020255) #30 waslb (ENSCARG00000020261) #29 TMEM229A (ENSCARG00000020267) ENSCARG00000020269 gpr37b (ENSCARG00000020276) #26 aebp2 (ENSCARG00000020323) plekha5 (ENSCARG00000007235) ENSCARG00000007388 ENSCARG00000007431 pik3cg (ENSCARG00000007730) NAMPT (ENSCARG00000007771) SYPL1 (ENSCARG00000008310) ENSCARG00000008316 znf800b (ENSCARG00000008321) #20 GRM8 (ENSCARG00000008373) #22 ENSCARG00000009218 ENSCARG00000009222 ANO6 (ENSCARG00000009246) pwp1 (ENSCARG00000009387) ENSCARG00000009461 nudt4b (ENSCARG00000009484) dnajc2 (ENSCARG00000009510) PMPCB (ENSCARG00000009637) med21 (ENSCARG00000010280) TM7SF3 (ENSCARG00000010311) ENSCARG00000010417 ENSCARG00000010438 naga (ENSCARG00000010483) ENSCARG00000010513 lrig3 (ENSCARG00000011000) Cyprininae_a ANCESTRAL SPECIES 176 ENSGT00390000004586.i ENSGT00550000074907.i ENSGT00390000011863.d.a.a.a ENSGT01080000257336.b.e.b.a.a.d.b ENSGT00940000156628.c.d ENSGT00510000048519.a.f.a ENSGT00940000155728.p.c ENSGT00940000165209.c ENSGT00940000154471.a.b.a.b.u.b.a ENSGT00940000155765.s.b.a ENSGT00940000156858.d ENSGT00940000153456.b.a.v ENSGT01030000234637.a.b.k ENSGT00940000158612.g ENSGT00390000008140.l.a.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.a.b #22 ENSGT01100000263518.B.b.b.b.e #26 ENSGT01030000234648.a.b.a.a.b.cb.b.a.a #22 ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f #26 ENSGT00390000010899.a.b.b.b.g ENSGT00970000193473 ENSGT00940000156567.a.a.c.b #30 ENSGT00730000110895.b.a.o.a.j.a #29 ENSGT00940000156567.a.a.c.a.b #30 ENSGT00940000157073.b.b #31 ENSGT00390000008099.ec #32 ENSGT00940000155529.B.b ENSGT01030000234550.a.a.d.a.b.a ##35 ENSGT00940000166253.a.a ENSGT00390000018424 Common carp reference MODERN SPECIES 8 gpr22a (ENSCCRG00000072873) COG5 (ENSCCRG00000032375) dus4l (ENSCCRG00000079501) bcap29 (ENSCCRG00000036879) slco1c1 (ENSCCRG00000036873) PDE3A (ENSCCRG00000021746) aebp2 (ENSCCRG00000005082) plekha5 (ENSCCRG00000002321) ENSCCRG00000073344 ENSCCRG00000082257 ENSCCRG00000002339 pik3cg (ENSCCRG00000023794) ENSCCRG00000033512 SYPL1 (ENSCCRG00000034117) znf800b (ENSCCRG00000002416) #20 GRM8 (ENSCCRG00000082897) #22 ENSCCRG00000035847 ENSCCRG00000062091 gpr37b (ENSCCRG00000005448) #26 ENSCCRG00000005453 waslb (ENSCCRG00000005466) #29 LMOD2 (ENSCCRG00000070775) #30 asb15b (ENSCCRG00000005552) #31 ndufa5 (ENSCCRG00000005566) #32 ENSCCRG00000005616 slc13a4 (ENSCCRG00000082740) ##35 zgc:162331 (ENSCCRG00000029327) ssbp1 (ENSCCRG00000029330) creb3l2 (ENSCCRG00000029340) ENSCCRG00000008512 ENSCCRG00000056115 Golden-line barbel MODERN SPECIES 55 bcap29 (ENSSGRG00000042728) slco1c1 (ENSSGRG00000042729) PDE3A (ENSSGRG00000042730) aebp2 (ENSSGRG00000042731) plekha5 (ENSSGRG00000042734) ENSSGRG00000042735 ENSSGRG00000042737 ENSSGRG00000042739 ENSSGRG00000042744 pik3cg (ENSSGRG00000042816) NAMPT (ENSSGRG00000042818) SYPL1 (ENSSGRG00000042859) SYPL1 (ENSSGRG00000042860) ATXN7L1 (ENSSGRG00000042861) znf800b (ENSSGRG00000042862) #20 GRM8 (ENSSGRG00000042863) #22 ENSSGRG00000042865 gpr37b (ENSSGRG00000042868) #26 TMEM229A (ENSSGRG00000042869) ENSSGRG00000042870 ENSSGRG00000042876 #30 asb15b (ENSSGRG00000042877) #31 PTPRZ1 (ENSSGRG00000042885) coa6 (ENSSGRG00000043402) slc13a4 (ENSSGRG00000043403) ##35 zgc:162331 (ENSSGRG00000043404) ENSSGRG00000043405 ssbp1 (ENSSGRG00000043406) creb3l2 (ENSSGRG00000043426) ENSSGRG00000043523 RASSF3 (ENSSGRG00000043644) Zebrafish MODERN SPECIES 19 cog5 (ENSDARG00000008235) gpr22a (ENSDARG00000004592) dus4l (ENSDARG00000006567) bcap29 (ENSDARG00000016231) slco1c1 (ENSDARG00000016749) PDE3A (ENSDARG00000004227) aebp2 (ENSDARG00000006038) plekha5 (ENSDARG00000045870) ENSDARG00000098551 ENSDARG00000060248 pik3cg (ENSDARG00000017757) NAMPT (ENSDARG00000030598) SYPL1 (ENSDARG00000077356) ENSDARG00000089860 znf800b (ENSDARG00000039843) #20 GRM8 (ENSDARG00000077654) #22 ENSDARG00000112842 ENSDARG00000070414 gpr37b (ENSDARG00000033296) #26 waslb (ENSDARG00000006283) #29 LMOD2 (ENSDARG00000045864) #30 asb15b (ENSDARG00000045863) #31 smkr1 (ENSDARG00000107526) cd9b (ENSDARG00000016691) ano2b (ENSDARG00000101363) ENSDARG00000115613 ntf3 (ENSDARG00000059043) TBC1D30 (ENSDARG00000075281) gnsa (ENSDARG00000023766) zgc:194209 (ENSDARG00000039356) RASSF3 (ENSDARG00000059064) Otomorpha ANCESTRAL SPECIES 785 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Otophysi ANCESTRAL SPECIES 590 ENSGT00390000008140.k.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Cyprininae ANCESTRAL SPECIES 640 ENSGT00550000074907.j ENSGT00390000011863.d.a.a.b ENSGT01080000257336.b.e.b.a.a.d.a ENSGT00940000156628.c.c ENSGT00510000048519.a.e ENSGT00940000155728.p.d ENSGT00940000165209.d ENSGT00940000154471.a.b.a.b.u.b.b ENSGT00940000155765.s.b.b ENSGT00940000156858.c ENSGT00940000153456.b.a.u ENSGT01030000234637.a.b.l ENSGT00940000158612.h ENSGT00390000008140.l.a.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 1123 ENSCARG00000067310 #22 Goldfish MODERN SPECIES 21 gpr22a (ENSCARG00000060783) bcap29 (ENSCARG00000060796) slco1c1 (ENSCARG00000060817) PDE3A (ENSCARG00000061040) aebp2 (ENSCARG00000061141) plekha5 (ENSCARG00000061281) ENSCARG00000061615 ENSCARG00000061642 pik3cg (ENSCARG00000061947) ENSCARG00000061995 ENSCARG00000062037 NAMPT (ENSCARG00000062094) SYPL1 (ENSCARG00000063241) ATXN7L1 (ENSCARG00000063251) znf800b (ENSCARG00000063271) #20 ENSCARG00000063307 #22 ENSCARG00000063345 mrpl42 (ENSCARG00000063485) ANO6 (ENSCARG00000063575) ENSCARG00000064071 tbk1 (ENSCARG00000064133) eps8a (ENSCARG00000064257) rpap3 (ENSCARG00000065349) atp23 (ENSCARG00000065408) lrig3 (ENSCARG00000065421) zgc:165507 (ENSCARG00000065427) ENSCARG00000065434 ETV6 (ENSCARG00000065438) ENSCARG00000065482 ENSCARG00000065492 TIMP3 (ENSCARG00000065525) Cyprininae_a ANCESTRAL SPECIES 218 ENSGT00390000004586.j ENSGT00550000074907.j ENSGT00390000011863.d.a.a.b ENSGT01080000257336.b.e.b.a.a.d.a ENSGT00940000156628.c.c ENSGT00510000048519.a.f.b ENSGT00940000155728.p.d ENSGT00940000165209.d ENSGT00940000154471.a.b.a.b.u.b.b ENSGT00940000155765.s.b.b ENSGT00940000156858.c ENSGT00940000153456.b.a.u ENSGT01030000234637.a.b.l ENSGT00940000158612.h ENSGT00390000008140.l.a.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Golden-line barbel MODERN SPECIES 128 COG5 (ENSSGRG00000054919) gpr22a (ENSSGRG00000054921) dus4l (ENSSGRG00000054922) bcap29 (ENSSGRG00000054923) slco1c1 (ENSSGRG00000054925) PDE3A (ENSSGRG00000054926) ENSSGRG00000054927 plekha5 (ENSSGRG00000054928) ENSSGRG00000054932 ENSSGRG00000054935 ENSSGRG00000054943 pik3cg (ENSSGRG00000054956) ENSSGRG00000054960 ATXN7L1 (ENSSGRG00000054961) znf800b (ENSSGRG00000001136) #20 ENSSGRG00000001146 #22 Characiphysae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Characiphysae_b ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Characoidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b.cb.b.b #22 Red-bellied piranha MODERN SPECIES 916 ENSPNAG00000003086 ZNF800 (ENSPNAG00000014350) #20 ENSPNAG00000014360 #22 Euteleosteomorpha ANCESTRAL SPECIES 86 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00970000193473 ENSGT00940000159825.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT01050000244841.A.b.b.a.a ENSGT00390000004586 ENSGT00940000166951 ENSGT00550000074907 ENSGT00390000011863.d.a.a ENSGT01080000257336.b.e.b.a.a.d Acanthomorphata ANCESTRAL SPECIES 77 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00970000193473 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 Cod MODERN SPECIES 10 gxylt1b (ENSGMOG00000018808) zcrb1 (ENSGMOG00000018788) ENSGMOG00000018779 prickle1b (ENSGMOG00000018760) pus7l (ENSGMOG00000019423) ENSGMOG00000026197 ENSGMOG00000024775 lrrc17 (ENSGMOG00000029090) CCDC146 (ENSGMOG00000029970) fgl2a (ENSGMOG00000000287) ENSGMOG00000027082 NAMPT (ENSGMOG00000011742) ENSGMOG00000011737 ENSGMOG00000036916 ENSGMOG00000035773 #20 GRM8 (ENSGMOG00000018269) #22 ENSGMOG00000018255 gpr37b (ENSGMOG00000032389) #26 ENSGMOG00000032366 ENSGMOG00000029716 ENSGMOG00000034149 ENSGMOG00000017761 ENSGMOG00000025366 ENSGMOG00000023481 ENSGMOG00000028650 ENSGMOG00000004942 ENSGMOG00000015573 ENSGMOG00000031938 ENSGMOG00000024936 ENSGMOG00000012743 ENSGMOG00000031698 Euacanthomorphacea ANCESTRAL SPECIES 18 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 20 ENSMMDG00005010946 ENSMMDG00005010947 TNNI2 (ENSMMDG00005010948) ENSMMDG00005010949 tnnt3a (ENSMMDG00005010950) myod1 (ENSMMDG00005010952) zgc:172145 (ENSMMDG00005010974) CACNA2D4 (ENSMMDG00005010984) LRTM2 (ENSMMDG00005011155) ENSMMDG00005011190 urahb (ENSMMDG00005012437) acot19 (ENSMMDG00005012454) ENSMMDG00005012464 ENSMMDG00005012488 ENSMMDG00005012495 ENSMMDG00005012577 #22 ENSMMDG00005012579 ENSMMDG00005012580 ENSMMDG00005012582 ENSMMDG00005012585 #24 GRAMD4 (ENSMMDG00005012587) ENSMMDG00005012592 ENSMMDG00005012593 ENSMMDG00005012595 ENSMMDG00005012599 ENSMMDG00005012650 ENSMMDG00005012652 ENSMMDG00005012702 BET1L (ENSMMDG00005017482) deaf1 (ENSMMDG00005017485) drd4a (ENSMMDG00005017487) Pinecone sodierfish MODERN SPECIES 15 prickle1b (ENSMMDG00005008185) ENSMMDG00005008178 ENSMMDG00005008176 pus7l (ENSMMDG00005008172) ENSMMDG00005008167 ENSMMDG00005008151 lrrc17 (ENSMMDG00005008150) fgl2a (ENSMMDG00005008146) ENSMMDG00005008142 ENSMMDG00005008141 NAMPT (ENSMMDG00005007254) ENSMMDG00005007177 ENSMMDG00005007171 ATXN7L1 (ENSMMDG00005007167) znf800a (ENSMMDG00005007165) #20 GRM8 (ENSMMDG00005006075) #22 gpr37b (ENSMMDG00005006050) #26 TMEM229A (ENSMMDG00005006045) spam1 (ENSMMDG00005006037) #27 WASL (ENSMMDG00005005988) #29 LMOD2 (ENSMMDG00005005976) #30 asb15b (ENSMMDG00005005967) #31 ENSMMDG00005005964 ENSMMDG00005005963 ENSMMDG00005005959 ints13 (ENSMMDG00005005948) dnali1 (ENSMMDG00005005937) ANO6 (ENSMMDG00005005354) pwp1 (ENSMMDG00005004969) mrpl42 (ENSMMDG00005004962) ENSMMDG00005004895 Percomorphaceae ANCESTRAL SPECIES 19 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Tiger tail seahorse MODERN SPECIES 128 b2m (ENSHCOG00000008946) ENSHCOG00000008939 ENSHCOG00000008892 kcnc2 (ENSHCOG00000008884) ENSHCOG00000008793 ENSHCOG00000008769 RAB19 (ENSHCOG00000008751) lrrc17 (ENSHCOG00000008723) fgl2a (ENSHCOG00000008718) ENSHCOG00000008702 ENSHCOG00000008649 NAMPT (ENSHCOG00000008631) ENSHCOG00000008615 ENSHCOG00000008596 ENSHCOG00000008592 #20 ENSHCOG00000008587 #22 Percomorphaceae_B ANCESTRAL SPECIES 21 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 Percomorphaceae_C ANCESTRAL SPECIES 22 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 Eupercaria ANCESTRAL SPECIES 21 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000154446.b.a.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00940000163454.b ENSGT00390000017324 Eupecaria_A ANCESTRAL SPECIES 21 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000154446.b.a.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00940000163454.b ENSGT00390000017324 Ballan wrasse MODERN SPECIES 210 pus7l (ENSLBEG00000000724) ENSLBEG00000000820 ENSLBEG00000000842 RAB19 (ENSLBEG00000000853) lrrc17 (ENSLBEG00000000886) fgl2a (ENSLBEG00000000892) ENSLBEG00000000920 ENSLBEG00000000973 NAMPT (ENSLBEG00000001018) ENSLBEG00000001057 ENSLBEG00000001067 ATXN7L1 (ENSLBEG00000001090) znf800a (ENSLBEG00000001105) #20 GRM8 (ENSLBEG00000001149) #22 ENSLBEG00000001182 gpr37b (ENSLBEG00000001205) #26 TMEM229A (ENSLBEG00000001212) spam1 (ENSLBEG00000001281) #27 WASL (ENSLBEG00000001682) #29 ENSLBEG00000001707 #30 ENSLBEG00000001722 #30 asb15b (ENSLBEG00000001759) #31 ENSLBEG00000001864 ENSLBEG00000001920 ENSLBEG00000001992 Eupecaria_B ANCESTRAL SPECIES 21 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000154446.b.a.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00940000163454.b ENSGT00390000017324 Eupecaria_C ANCESTRAL SPECIES 18 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000154446.b.a.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00940000163454.b ENSGT00390000017324 Eupercaria_incertae_sedis ANCESTRAL SPECIES 22 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 European seabass MODERN SPECIES 23 pphln1 (ENSDLAG00005025262) prickle1b (ENSDLAG00005025276) pus7l (ENSDLAG00005025281) ENSDLAG00005025284 ENSDLAG00005031351 ENSDLAG00005034615 ENSDLAG00005027826 fgl2a (ENSDLAG00005025308) ccdc146 (ENSDLAG00005025298) ENSDLAG00005025312 NAMPT (ENSDLAG00005025320) ENSDLAG00005031243 ENSDLAG00005033916 ATXN7L1 (ENSDLAG00005027614) ZNF800 (ENSDLAG00005030175) #20 GRM8 (ENSDLAG00005034515) #22 ENSDLAG00005026662 ENSDLAG00005034000 gpr37b (ENSDLAG00005029174) #26 TMEM229A (ENSDLAG00005026409) ENSDLAG00005031657 #27 WASL (ENSDLAG00005026425) #29 ENSDLAG00005032418 #30 asb15b (ENSDLAG00005032568) #31 ENSDLAG00005029213 ENSDLAG00005032255 ENSDLAG00005031185 ENSDLAG00005028292 ENSDLAG00005029557 pwp1 (ENSDLAG00005030181) ENSDLAG00005029902 Large yellow croaker MODERN SPECIES 491 prickle1b (ENSLCRG00005013135) pus7l (ENSLCRG00005013133) ENSLCRG00005013129 ENSLCRG00005013124 ENSLCRG00005013122 lrrc17 (ENSLCRG00005013121) fgl2a (ENSLCRG00005013120) ENSLCRG00005013115 ENSLCRG00005013111 ENSLCRG00005013109 nampt1 (ENSLCRG00005011507) ENSLCRG00005022663 ATXN7L1 (ENSLCRG00005022662) ENSLCRG00005022660 #20 ENSLCRG00005022658 GRM8 (ENSLCRG00005022356) #22 ENSLCRG00005022338 ENSLCRG00005022337 gpr37b (ENSLCRG00005022333) #26 ENSLCRG00005022331 TMEM229A (ENSLCRG00005022330) spam1 (ENSLCRG00005022328) #27 ENSLCRG00005022326 LMOD2 (ENSLCRG00005022325) #30 asb15b (ENSLCRG00005022323) #31 ENSLCRG00005022322 ENSLCRG00005022319 ENSLCRG00005022318 ints13 (ENSLCRG00005022304) ANO6 (ENSLCRG00005021899) pwp1 (ENSLCRG00005021770) Gilthead seabream MODERN SPECIES 5 ENSSAUG00010027311 ENSSAUG00010027314 pus7l (ENSSAUG00010027316) ENSSAUG00010027317 ENSSAUG00010027318 lrrc17 (ENSSAUG00010027320) ccdc146 (ENSSAUG00010027322) fgl2a (ENSSAUG00010027323) GSAP (ENSSAUG00010027325) ENSSAUG00010027328 NAMPT (ENSSAUG00010027334) ENSSAUG00010027359 ENSSAUG00010027360 ENSSAUG00010027361 znf800a (ENSSAUG00010027363) #20 GRM8 (ENSSAUG00010027371) #22 ENSSAUG00010027418 gpr37b (ENSSAUG00010027419) #26 TMEM229A (ENSSAUG00010027420) spam1 (ENSSAUG00010027421) #27 WASL (ENSSAUG00010027422) #29 LMOD2 (ENSSAUG00010027423) #30 asb15b (ENSSAUG00010027424) #31 ENSSAUG00010027427 ENSSAUG00010027428 ENSSAUG00010001489 ENSSAUG00010001512 ints13 (ENSSAUG00010001641) ANO6 (ENSSAUG00010002478) ENSSAUG00010006043 pwp1 (ENSSAUG00010006053) Perciformes ANCESTRAL SPECIES 18 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j Cottioidei ANCESTRAL SPECIES 19 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b Lumpfish MODERN SPECIES 15 pphln1 (ENSCLMG00005008873) prickle1b (ENSCLMG00005008872) pus7l (ENSCLMG00005008869) ENSCLMG00005008865 ENSCLMG00005008863 lrrc17 (ENSCLMG00005008858) fgl2a (ENSCLMG00005008857) ENSCLMG00005008856 ENSCLMG00005008854 NAMPT (ENSCLMG00005008733) ENSCLMG00005008732 ENSCLMG00005008731 ATXN7L1 (ENSCLMG00005008730) ZNF800 (ENSCLMG00005008728) #20 ENSCLMG00005015402 GRM8 (ENSCLMG00005015401) #22 ENSCLMG00005015399 gpr37b (ENSCLMG00005015398) #26 TMEM229A (ENSCLMG00005015397) ENSCLMG00005015396 #27 WASL (ENSCLMG00005015391) #29 LMOD2 (ENSCLMG00005015389) #30 ENSCLMG00005015388 ENSCLMG00005015387 ENSCLMG00005015386 ints13 (ENSCLMG00005015383) ANO6 (ENSCLMG00005013858) pwp1 (ENSCLMG00005013351) mrpl42 (ENSCLMG00005013350) ube2nb (ENSCLMG00005013340) nudt4b (ENSCLMG00005013339) Stickleback MODERN SPECIES 3 zcrb1 (ENSGACG00000018860) ENSGACG00000018857 ENSGACG00000018856 prickle1b (ENSGACG00000018854) pus7l (ENSGACG00000018853) ENSGACG00000018852 ENSGACG00000018851 ENSGACG00000018847 lrrc17 (ENSGACG00000018846) fgl2a (ENSGACG00000018844) ENSGACG00000018843 ENSGACG00000018841 NAMPT (ENSGACG00000018838) ENSGACG00000018836 ZNF800 (ENSGACG00000018833) #20 GRM8 (ENSGACG00000018829) #22 ENSGACG00000018828 gpr37b (ENSGACG00000018827) #26 ENSGACG00000018826 ENSGACG00000018824 WASL (ENSGACG00000018821) #29 LMOD2 (ENSGACG00000018820) #30 ENSGACG00000018818 ENSGACG00000018817 ENSGACG00000018816 ints13 (ENSGACG00000018815) ANO6 (ENSGACG00000018814) pwp1 (ENSGACG00000018812) mrpl42 (ENSGACG00000018811) ENSGACG00000018807 nudt4b (ENSGACG00000018806) Perciformes_a ANCESTRAL SPECIES 19 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00970000193473 ENSGT00940000159825.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 Pike perch MODERN SPECIES 64 prickle1b (ENSSLUG00000013848) pus7l (ENSSLUG00000013825) ENSSLUG00000013818 ENSSLUG00000013810 RAB19 (ENSSLUG00000013764) lrrc17 (ENSSLUG00000013741) fgl2a (ENSSLUG00000013728) ENSSLUG00000013715 ENSSLUG00000013707 NAMPT (ENSSLUG00000013234) ENSSLUG00000013197 ENSSLUG00000013191 ENSSLUG00000013188 ENSSLUG00000013186 znf800a (ENSSLUG00000013182) #20 GRM8 (ENSSLUG00000011042) #22 ENSSLUG00000010921 Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 129 ENSCGOG00000016801 ENSCGOG00000016805 brd1b (ENSCGOG00000016807) ftsj1 (ENSCGOG00000016813) ENSCGOG00000016934 ENSCGOG00000017050 #22 ENSCGOG00000017052 #24 ENSCGOG00000017062 GPR37 (ENSCGOG00000017065) #26 ENSCGOG00000017069 #27 ENSCGOG00000017121 #27 HYAL4 (ENSCGOG00000017123) #28 Channel bull blenny MODERN SPECIES 15 ENSCGOG00000006756 pus7l (ENSCGOG00000006818) ENSCGOG00000006825 ENSCGOG00000006828 RAB19 (ENSCGOG00000006832) lrrc17 (ENSCGOG00000006834) ENSCGOG00000006835 fgl2a (ENSCGOG00000006836) ENSCGOG00000006839 ENSCGOG00000006843 NAMPT (ENSCGOG00000006887) ENSCGOG00000007826 ENSCGOG00000007827 ENSCGOG00000007830 znf800a (ENSCGOG00000007834) #20 GRM8 (ENSCGOG00000007851) #22 ENSCGOG00000008473 gpr37b (ENSCGOG00000008474) #26 ENSCGOG00000008478 ENSCGOG00000008482 TMEM229A (ENSCGOG00000008486) spam1 (ENSCGOG00000008489) #27 ENSCGOG00000008515 ENSCGOG00000009020 ENSCGOG00000009086 ENSCGOG00000009115 ENSCGOG00000009119 ints13 (ENSCGOG00000009144) ANO6 (ENSCGOG00000009713) pwp1 (ENSCGOG00000010899) mrpl42 (ENSCGOG00000010916) Tetraodontidae ANCESTRAL SPECIES 17 ENSGT00390000013995.b.b.k.a ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000153629.b ENSGT00530000063554.b ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00390000002793 ENSGT00940000158969 ENSGT00940000163454.b ENSGT00390000017324 ENSGT00940000165713 ENSGT00390000010491 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b Fugu MODERN SPECIES 9 ENSTRUG00000024480 pus7l (ENSTRUG00000016734) ENSTRUG00000025096 ENSTRUG00000016729 lrrc17 (ENSTRUG00000016725) fgl2a (ENSTRUG00000021786) ENSTRUG00000016715 ENSTRUG00000025506 ENSTRUG00000027542 NAMPT (ENSTRUG00000016695) ENSTRUG00000016687 ENSTRUG00000032410 ATXN7L1 (ENSTRUG00000025645) ZNF800 (ENSTRUG00000016675) #20 ENSTRUG00000028293 GRM8 (ENSTRUG00000016654) #22 gpr37b (ENSTRUG00000016651) #26 ENSTRUG00000021448 WASL (ENSTRUG00000016634) #29 LMOD2 (ENSTRUG00000031995) #30 asb15b (ENSTRUG00000016616) #31 ENSTRUG00000025114 ENSTRUG00000022666 ints13 (ENSTRUG00000016606) ANO6 (ENSTRUG00000016595) ENSTRUG00000016589 pwp1 (ENSTRUG00000016583) mrpl42 (ENSTRUG00000025949) ube2nb (ENSTRUG00000028142) nudt4b (ENSTRUG00000021444) pkp2 (ENSTRUG00000016573) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000019671 cldn26 (ENSTNIG00000019659) ENSTNIG00000019583 #22 ENSTNIG00000019690 ENSTNIG00000001881 polr2g (ENSTNIG00000019445) ENSTNIG00000019797 ENSTNIG00000019839 ENSTNIG00000019661 ENSTNIG00000019697 ENSTNIG00000019522 ENSTNIG00000019787 ENSTNIG00000003600 ENSTNIG00000017064 zgc:153867 (ENSTNIG00000019453) ENSTNIG00000001876 LTO1 (ENSTNIG00000019843) ENSTNIG00000019464 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 11 ENSTNIG00000018503 pphln1 (ENSTNIG00000018502) ENSTNIG00000018501 pus7l (ENSTNIG00000018500) ENSTNIG00000018499 ENSTNIG00000018498 lrrc17 (ENSTNIG00000018497) fgl2a (ENSTNIG00000018496) ENSTNIG00000018495 ENSTNIG00000018494 NAMPT (ENSTNIG00000018493) ENSTNIG00000018492 ENSTNIG00000018491 znf800a (ENSTNIG00000018490) #20 ENSTNIG00000018489 #22 GRM8 (ENSTNIG00000018488) #22 ENSTNIG00000018487 WASL (ENSTNIG00000018486) #29 LMOD2 (ENSTNIG00000018485) #30 asb15b (ENSTNIG00000018484) #31 ENSTNIG00000018483 ints13 (ENSTNIG00000018482) ANO6 (ENSTNIG00000018481) ENSTNIG00000018480 pwp1 (ENSTNIG00000018479) MRPL42 (ENSTNIG00000018478) ube2nb (ENSTNIG00000018477) nudt4b (ENSTNIG00000018476) ENSTNIG00000018475 ENSTNIG00000018539 ENSTNIG00000018538 Tetraodon MODERN SPECIES 11 zcrb1 (ENSTNIG00000018504) ENSTNIG00000018503 pphln1 (ENSTNIG00000018502) ENSTNIG00000018501 pus7l (ENSTNIG00000018500) ENSTNIG00000018499 ENSTNIG00000018498 lrrc17 (ENSTNIG00000018497) fgl2a (ENSTNIG00000018496) ENSTNIG00000018495 ENSTNIG00000018494 NAMPT (ENSTNIG00000018493) ENSTNIG00000018492 ENSTNIG00000018491 znf800a (ENSTNIG00000018490) #20 ENSTNIG00000018489 #22 GRM8 (ENSTNIG00000018488) #22 ENSTNIG00000018487 WASL (ENSTNIG00000018486) #29 LMOD2 (ENSTNIG00000018485) #30 asb15b (ENSTNIG00000018484) #31 ENSTNIG00000018483 ints13 (ENSTNIG00000018482) ANO6 (ENSTNIG00000018481) ENSTNIG00000018480 pwp1 (ENSTNIG00000018479) MRPL42 (ENSTNIG00000018478) ube2nb (ENSTNIG00000018477) nudt4b (ENSTNIG00000018476) ENSTNIG00000018475 ENSTNIG00000018539 Percomorphaceae_D ANCESTRAL SPECIES 22 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00390000008429.f ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT00940000163454.b Carangaria ANCESTRAL SPECIES 22 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j Pleuronectoidei ANCESTRAL SPECIES 16 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000163454.b ENSGT00390000008429.f ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Tongue sole MODERN SPECIES 18 zcrb1 (ENSCSEG00000010498) pphln1 (ENSCSEG00000010468) ENSCSEG00000010450 pus7l (ENSCSEG00000010433) ENSCSEG00000010422 RAB19 (ENSCSEG00000010402) lrrc17 (ENSCSEG00000010394) fgl2a (ENSCSEG00000010389) ENSCSEG00000010361 ENSCSEG00000010354 ENSCSEG00000010322 NAMPT (ENSCSEG00000010306) ENSCSEG00000010298 ATXN7L1 (ENSCSEG00000010272) znf800a (ENSCSEG00000010257) #20 GRM8 (ENSCSEG00000010203) #22 gpr37b (ENSCSEG00000010168) #26 rassf8b (ENSCSEG00000010120) pkp2 (ENSCSEG00000010096) nudt4b (ENSCSEG00000010079) ube2nb (ENSCSEG00000010074) mrpl42 (ENSCSEG00000010067) pwp1 (ENSCSEG00000010051) ANO6 (ENSCSEG00000010009) ints13 (ENSCSEG00000009946) ENSCSEG00000009931 ENSCSEG00000009915 ENSCSEG00000009899 LMOD2 (ENSCSEG00000009889) #30 ENSCSEG00000009861 spam1 (ENSCSEG00000009631) #27 Turbot MODERN SPECIES 11 zcrb1 (ENSSMAG00000020477) pphln1 (ENSSMAG00000020498) prickle1b (ENSSMAG00000020509) pus7l (ENSSMAG00000020517) ENSSMAG00000020519 ENSSMAG00000020521 ENSSMAG00000020530 fgl2a (ENSSMAG00000020550) ccdc146 (ENSSMAG00000020536) ENSSMAG00000020555 NAMPT (ENSSMAG00000000077) ENSSMAG00000033231 ENSSMAG00000000080 ATXN7L1 (ENSSMAG00000000082) ZNF800 (ENSSMAG00000000084) #20 GRM8 (ENSSMAG00000000088) #22 ENSSMAG00000000091 gpr37b (ENSSMAG00000000094) #26 ENSSMAG00000000148 ENSSMAG00000000098 #27 WASL (ENSSMAG00000000151) #29 ENSSMAG00000000169 #30 asb15b (ENSSMAG00000037064) #31 ENSSMAG00000000174 ENSSMAG00000000183 ENSSMAG00000036226 ENSSMAG00000000188 ENSSMAG00000000210 pwp1 (ENSSMAG00000000253) mrpl42 (ENSSMAG00000000262) ube2nb (ENSSMAG00000000266) Carangaria_A ANCESTRAL SPECIES 21 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j Barramundi perch MODERN SPECIES 283 pus7l (ENSLCAG00010009651) ENSLCAG00010009641 ENSLCAG00010009635 ENSLCAG00010009630 lrrc17 (ENSLCAG00010009628) fgl2a (ENSLCAG00010009625) ENSLCAG00010009613 ENSLCAG00010009609 ENSLCAG00010009604 ENSLCAG00010009594 NAMPT (ENSLCAG00010009555) ENSLCAG00010009540 ENSLCAG00010009536 ATXN7L1 (ENSLCAG00010009531) ENSLCAG00010009521 #20 ENSLCAG00010008966 #22 Seriola ANCESTRAL SPECIES 9 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b Greater amberjack MODERN SPECIES 60 pphln1 (ENSSDUG00000007109) prickle1b (ENSSDUG00000006972) pus7l (ENSSDUG00000006941) ENSSDUG00000006921 ENSSDUG00000006897 ENSSDUG00000006885 lrrc17 (ENSSDUG00000006874) fgl2a (ENSSDUG00000006851) ENSSDUG00000006799 ENSSDUG00000006771 NAMPT (ENSSDUG00000006732) ENSSDUG00000006700 ENSSDUG00000006695 znf800a (ENSSDUG00000006679) #20 ENSSDUG00000006667 GRM8 (ENSSDUG00000006607) #22 gpr37b (ENSSDUG00000006582) #26 TMEM229A (ENSSDUG00000006575) spam1 (ENSSDUG00000006291) #27 WASL (ENSSDUG00000006232) #29 LMOD2 (ENSSDUG00000006211) #30 asb15b (ENSSDUG00000006192) #31 ENSSDUG00000006155 ENSSDUG00000006133 ints13 (ENSSDUG00000006076) ANO6 (ENSSDUG00000005991) pwp1 (ENSSDUG00000005956) mrpl42 (ENSSDUG00000005949) ube2nb (ENSSDUG00000005930) nudt4b (ENSSDUG00000005883) pkp2 (ENSSDUG00000005854) Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 1856 ENSSLDG00000009696 #22 Yellowtail amberjack MODERN SPECIES 2971 zcrb1 (ENSSLDG00000012143) pphln1 (ENSSLDG00000012124) prickle1b (ENSSLDG00000012107) pus7l (ENSSLDG00000012092) ENSSLDG00000012076 ENSSLDG00000012056 lrrc17 (ENSSLDG00000012031) fgl2a (ENSSLDG00000012009) ENSSLDG00000011991 ENSSLDG00000011968 ENSSLDG00000011933 NAMPT (ENSSLDG00000011906) ENSSLDG00000011891 ENSSLDG00000011876 znf800a (ENSSLDG00000011855) #20 ENSSLDG00000011823 #22 ENSSLDG00000011807 ENSSLDG00000011796 ENSSLDG00000011782 ENSSLDG00000011764 TMEM229A (ENSSLDG00000011751) spam1 (ENSSLDG00000010841) #27 WASL (ENSSLDG00000010577) #29 LMOD2 (ENSSLDG00000010548) #30 asb15b (ENSSLDG00000010507) #31 ENSSLDG00000010477 ENSSLDG00000010460 ints13 (ENSSLDG00000010397) ANO6 (ENSSLDG00000010286) pwp1 (ENSSLDG00000010201) mrpl42 (ENSSLDG00000010159) Anabantaria ANCESTRAL SPECIES 21 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT00940000163454.b ENSGT00390000002793 Zig-zag eel MODERN SPECIES 15 zcrb1 (ENSMAMG00000009034) pphln1 (ENSMAMG00000009038) prickle1b (ENSMAMG00000009048) pus7l (ENSMAMG00000009057) ENSMAMG00000009068 ENSMAMG00000009086 ENSMAMG00000026764 lrrc17 (ENSMAMG00000009099) ccdc146 (ENSMAMG00000009112) fgl2a (ENSMAMG00000009199) GSAP (ENSMAMG00000009210) NAMPT (ENSMAMG00000009259) ENSMAMG00000009297 ATXN7L1 (ENSMAMG00000009335) ZNF800 (ENSMAMG00000009359) #20 GRM8 (ENSMAMG00000009368) #22 ENSMAMG00000026664 gpr37b (ENSMAMG00000009413) #26 ENSMAMG00000009421 WASL (ENSMAMG00000009429) #29 ENSMAMG00000009485 #30 asb15b (ENSMAMG00000009489) #31 ENSMAMG00000009532 ENSMAMG00000009555 ENSMAMG00000009567 ENSMAMG00000009583 ENSMAMG00000009639 pwp1 (ENSMAMG00000009695) mrpl42 (ENSMAMG00000009737) ube2nb (ENSMAMG00000026328) nudt4b (ENSMAMG00000028718) Anabantoidei ANCESTRAL SPECIES 21 ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000174483 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b.c.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT00940000163454.b ENSGT00390000002793 ENSGT00940000158969 Siamese fighting fish MODERN SPECIES 20 pphln1 (ENSBSLG00000008490) prickle1b (ENSBSLG00000008455) pus7l (ENSBSLG00000008415) ENSBSLG00000008400 ENSBSLG00000008387 lrrc17 (ENSBSLG00000008365) fgl2a (ENSBSLG00000008346) ENSBSLG00000008313 ENSBSLG00000008272 ENSBSLG00000008234 NAMPT (ENSBSLG00000015932) ENSBSLG00000015917 ENSBSLG00000015912 ATXN7L1 (ENSBSLG00000015902) znf800a (ENSBSLG00000015896) #20 GRM8 (ENSBSLG00000014307) #22 ENSBSLG00000014178 ENSBSLG00000014163 TMEM229A (ENSBSLG00000014146) gpr37b (ENSBSLG00000014129) #26 ENSBSLG00000014009 ENSBSLG00000013985 ENSBSLG00000013932 ENSBSLG00000013921 ENSBSLG00000013916 ENSBSLG00000013912 ENSBSLG00000013909 ints13 (ENSBSLG00000013546) ANO6 (ENSBSLG00000013196) pwp1 (ENSBSLG00000013011) mrpl42 (ENSBSLG00000013004) Climbing perch MODERN SPECIES 14 prickle1b (ENSATEG00000012583) pus7l (ENSATEG00000012646) ENSATEG00000028397 ENSATEG00000012772 ENSATEG00000025410 lrrc17 (ENSATEG00000012789) ccdc146 (ENSATEG00000028056) fgl2a (ENSATEG00000012801) GSAP (ENSATEG00000012857) ENSATEG00000012899 NAMPT (ENSATEG00000029164) ENSATEG00000026478 ENSATEG00000027978 ATXN7L1 (ENSATEG00000012970) ZNF800 (ENSATEG00000013010) #20 GRM8 (ENSATEG00000013049) #22 gpr37b (ENSATEG00000013133) #26 ENSATEG00000013161 #29 ENSATEG00000026427 #29 TMEM229A (ENSATEG00000030014) SPAM1 (ENSATEG00000013352) #27 WASL (ENSATEG00000013693) #29 LMOD2 (ENSATEG00000013744) #30 asb15b (ENSATEG00000013773) #31 ENSATEG00000013853 ENSATEG00000027596 ENSATEG00000026980 ENSATEG00000028360 ENSATEG00000013889 ENSATEG00000013938 ENSATEG00000013962 Ovalentaria ANCESTRAL SPECIES 22 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00940000163454.b Atherinomorphae ANCESTRAL SPECIES 21 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Oryzias ANCESTRAL SPECIES 20 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b ENSGT00940000158677 Oryzias_a ANCESTRAL SPECIES 15 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000153629.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00970000193473 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b ENSGT00940000158677 Japanese Medaka HdrR MODERN SPECIES 15 zcrb1 (ENSORLG00000013088) pphln1 (ENSORLG00000013095) ENSORLG00000013121 pus7l (ENSORLG00000013134) ENSORLG00000026485 ENSORLG00000030162 ENSORLG00000013138 lrrc17 (ENSORLG00000013146) fgl2a (ENSORLG00000028800) ccdc146 (ENSORLG00000026904) ENSORLG00000024907 NAMPT (ENSORLG00000013189) ENSORLG00000013204 ATXN7L1 (ENSORLG00000023732) ZNF800 (ENSORLG00000013219) #20 GRM8 (ENSORLG00000013236) #22 ENSORLG00000029411 gpr37b (ENSORLG00000013254) #26 TMEM229A (ENSORLG00000013258) ENSORLG00000026804 LMOD2 (ENSORLG00000013274) #30 asb15b (ENSORLG00000013320) #31 ENSORLG00000013327 ENSORLG00000022502 ints13 (ENSORLG00000013384) ANO6 (ENSORLG00000013454) pwp1 (ENSORLG00000013489) mrpl42 (ENSORLG00000013500) ube2nb (ENSORLG00000027331) nudt4b (ENSORLG00000013532) ENSORLG00000013540 Chinese medaka MODERN SPECIES 64 ENSOSIG00000003487 ENSOSIG00000021230 ENSOSIG00000021225 NAMPT (ENSOSIG00000020923) ENSOSIG00000020819 ZNF800 (ENSOSIG00000020816) #20 GRM8 (ENSOSIG00000020807) #22 gpr37b (ENSOSIG00000020804) #26 TMEM229A (ENSOSIG00000020802) ENSOSIG00000020800 #30 asb15b (ENSOSIG00000020797) #31 ENSOSIG00000020788 ENSOSIG00000020784 ints13 (ENSOSIG00000020779) ANO6 (ENSOSIG00000020558) pwp1 (ENSOSIG00000020486) mrpl42 (ENSOSIG00000020475) ube2nb (ENSOSIG00000020464) nudt4b (ENSOSIG00000020453) ENSOSIG00000020447 rassf8b (ENSOSIG00000020438) zgc:113263 (ENSOSIG00000020434) Oryzias_b ANCESTRAL SPECIES 19 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00940000174846.b ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT01100000263495.D.b.b.d ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b Indian medaka MODERN SPECIES 2 pphln1 (ENSOMEG00000011858) prickle1b (ENSOMEG00000011831) pus7l (ENSOMEG00000000283) ENSOMEG00000011800 ENSOMEG00000011779 ENSOMEG00000011749 lrrc17 (ENSOMEG00000011734) ENSOMEG00000011720 ENSOMEG00000011683 ENSOMEG00000011555 ENSOMEG00000011539 NAMPT (ENSOMEG00000011478) ENSOMEG00000011444 ATXN7L1 (ENSOMEG00000011428) ZNF800 (ENSOMEG00000011402) #20 GRM8 (ENSOMEG00000011342) #22 ENSOMEG00000011155 ENSOMEG00000000266 ENSOMEG00000011117 ENSOMEG00000011104 gpr37b (ENSOMEG00000011061) #26 TMEM229A (ENSOMEG00000011050) ENSOMEG00000011038 #29 LMOD2 (ENSOMEG00000011021) #30 asb15b (ENSOMEG00000010998) #31 ENSOMEG00000010976 ENSOMEG00000010964 ENSOMEG00000010952 ints13 (ENSOMEG00000010926) ANO6 (ENSOMEG00000010810) pwp1 (ENSOMEG00000010736) Javanese ricefish MODERN SPECIES 15 pus7l (ENSOJAG00000017858) ENSOJAG00000017850 ENSOJAG00000017800 ENSOJAG00000017788 lrrc17 (ENSOJAG00000017779) fgl2a (ENSOJAG00000017698) ENSOJAG00000017642 ENSOJAG00000017626 ENSOJAG00000017613 NAMPT (ENSOJAG00000017215) ENSOJAG00000017170 ENSOJAG00000017160 ATXN7L1 (ENSOJAG00000017145) znf800a (ENSOJAG00000016942) #20 ENSOJAG00000016917 GRM8 (ENSOJAG00000016577) #22 gpr37b (ENSOJAG00000016539) #26 TMEM229A (ENSOJAG00000016521) ENSOJAG00000016491 ENSOJAG00000016488 #30 asb15b (ENSOJAG00000016479) #31 ENSOJAG00000016407 ints13 (ENSOJAG00000016285) ANO6 (ENSOJAG00000015742) pwp1 (ENSOJAG00000015334) mrpl42 (ENSOJAG00000022838) ube2nb (ENSOJAG00000022819) nudt4b (ENSOJAG00000022807) rassf8b (ENSOJAG00000022802) ENSOJAG00000022789 ENSOJAG00000022775 Cyprinodontiformes ANCESTRAL SPECIES 19 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Cyprinodontoidei ANCESTRAL SPECIES 20 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 NAME_4 ANCESTRAL SPECIES 16 ENSGT00940000157529.i.b ENSGT00940000153629.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00990000204361 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j Mummichog MODERN SPECIES 303 fgl2a (ENSFHEG00000008738) ENSFHEG00000008710 ENSFHEG00000008668 NAMPT (ENSFHEG00000008659) ENSFHEG00000008601 ENSFHEG00000008591 ENSFHEG00000008569 ENSFHEG00000008551 #20 GRM8 (ENSFHEG00000008543) #22 ENSFHEG00000008492 Sheepshead minnow MODERN SPECIES 326 GRM8 (ENSCVAG00000006872) #22 ENSCVAG00000006883 ENSCVAG00000006893 gpr37b (ENSCVAG00000000677) #26 TMEM229A (ENSCVAG00000006914) WASL (ENSCVAG00000007005) #29 LMOD2 (ENSCVAG00000007017) #30 asb15b (ENSCVAG00000007024) #31 kitlgb (ENSCVAG00000007029) ENSCVAG00000007035 ENSCVAG00000007044 ints13 (ENSCVAG00000007126) ANO6 (ENSCVAG00000007193) ENSCVAG00000007224 chrna4b (ENSCVAG00000007248) zgpat (ENSCVAG00000007255) Poeciliinae ANCESTRAL SPECIES 19 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Platyfish MODERN SPECIES 8 gxylt1b (ENSXMAG00000009355) yaf2 (ENSXMAG00000009358) zcrb1 (ENSXMAG00000009359) prickle1b (ENSXMAG00000009369) ENSXMAG00000009381 pus7l (ENSXMAG00000009376) ENSXMAG00000009378 lrrc17 (ENSXMAG00000009384) fgl2a (ENSXMAG00000027974) ccdc146 (ENSXMAG00000009388) GSAP (ENSXMAG00000009404) NAMPT (ENSXMAG00000027069) ENSXMAG00000009433 ATXN7L1 (ENSXMAG00000009458) ZNF800 (ENSXMAG00000027262) #20 GRM8 (ENSXMAG00000009482) #22 ENSXMAG00000009521 gpr37b (ENSXMAG00000009526) #26 TMEM229A (ENSXMAG00000026259) WASL (ENSXMAG00000000088) #29 LMOD2 (ENSXMAG00000000109) #30 asb15b (ENSXMAG00000000116) #31 ENSXMAG00000003995 ENSXMAG00000024928 ENSXMAG00000026457 ints13 (ENSXMAG00000003999) ANO6 (ENSXMAG00000004021) pwp1 (ENSXMAG00000004040) MRPL42 (ENSXMAG00000004057) ube2nb (ENSXMAG00000004059) nudt4b (ENSXMAG00000004062) Poecilia ANCESTRAL SPECIES 28 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 Guppy DUPLICATION Guppy MODERN SPECIES 137 ENSPREG00000013835 #22 Guppy MODERN SPECIES 454 yaf2 (ENSPREG00000011388) zcrb1 (ENSPREG00000011402) pphln1 (ENSPREG00000011421) prickle1b (ENSPREG00000011451) pus7l (ENSPREG00000011483) ENSPREG00000011499 ENSPREG00000011513 ENSPREG00000011528 lrrc17 (ENSPREG00000011541) fgl2a (ENSPREG00000011549) ENSPREG00000011563 NAMPT (ENSPREG00000011592) ENSPREG00000011622 ENSPREG00000011643 ENSPREG00000011661 #20 GRM8 (ENSPREG00000011680) #22 ENSPREG00000011730 ENSPREG00000011737 ENSPREG00000011748 gpr37b (ENSPREG00000011755) #26 TMEM229A (ENSPREG00000011760) WASL (ENSPREG00000011770) #29 LMOD2 (ENSPREG00000011779) #30 asb15b (ENSPREG00000011786) #31 ENSPREG00000011803 ENSPREG00000011812 ENSPREG00000011821 ENSPREG00000011828 ints13 (ENSPREG00000011850) ANO6 (ENSPREG00000011910) pwp1 (ENSPREG00000011998) NAME_6 ANCESTRAL SPECIES 30 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 ENSGT00940000165713 ENSGT00540000070023.c.b.j ENSGT00940000155210.a.b ENSGT00940000158677 Sailfin molly MODERN SPECIES 1037 ENSPLAG00000008258 ENSPLAG00000008226 NAMPT (ENSPLAG00000008205) ENSPLAG00000008176 ATXN7L1 (ENSPLAG00000008170) ENSPLAG00000008154 #20 ENSPLAG00000008144 #22 Amazon molly MODERN SPECIES 261 prickle1b (ENSPFOG00000015581) pus7l (ENSPFOG00000015610) ENSPFOG00000015643 ENSPFOG00000015655 RAB19 (ENSPFOG00000015670) lrrc17 (ENSPFOG00000015687) CCDC146 (ENSPFOG00000015705) fgl2a (ENSPFOG00000015737) GSAP (ENSPFOG00000015749) ENSPFOG00000015797 ENSPFOG00000022064 NAMPT (ENSPFOG00000015802) ENSPFOG00000015872 ATXN7L1 (ENSPFOG00000024695) ZNF800 (ENSPFOG00000015897) #20 GRM8 (ENSPFOG00000015940) #22 ENSPFOG00000016126 ENSPFOG00000016133 gpr37b (ENSPFOG00000016135) #26 TMEM229A (ENSPFOG00000016137) WASL (ENSPFOG00000016151) #29 LMOD2 (ENSPFOG00000016265) #30 asb15b (ENSPFOG00000016288) #31 ENSPFOG00000022854 ENSPFOG00000016324 ints13 (ENSPFOG00000016332) ANO6 (ENSPFOG00000016411) pwp1 (ENSPFOG00000016538) mrpl42 (ENSPFOG00000016539) ube2nb (ENSPFOG00000016541) nudt4b (ENSPFOG00000016564) Aplocheiloidei ANCESTRAL SPECIES 316 ENSGT00940000157236.j ENSGT00730000111146 ENSGT00940000168446 ENSGT01010000222336.b.a.b.b ENSGT01030000234648.a.b.a.a.b.cb.b #22 Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015015990 Nfu_g_1_011621 (ENSNFUG00015016003) RAB19 (ENSNFUG00015004046) LRRC17 (ENSNFUG00015004054) ENSNFUG00015004058 ENSNFUG00015004060 ccdc146 (ENSNFUG00015004066) FGL2 (ENSNFUG00015004071) GSAP (ENSNFUG00015004076) NAMPT (ENSNFUG00015004116) SYPL1 (ENSNFUG00015004260) ATXN7L1 (ENSNFUG00015004272) ENSNFUG00015004281 ENSNFUG00015004290 ZNF800 (ENSNFUG00015004298) #20 GRM8 (ENSNFUG00015004357) #22 ENSNFUG00015004424 ENSNFUG00015004428 ENSNFUG00015004433 GPR37B (ENSNFUG00015004434) #26 ENSNFUG00015004437 TMEM229A (ENSNFUG00015004441) WASL (ENSNFUG00015004446) #29 ENSNFUG00015004449 WASL (ENSNFUG00015004453) #29 ENSNFUG00015004459 LMOD2 (ENSNFUG00015004463) #30 asb15b (ENSNFUG00015004475) #31 KITLGB (ENSNFUG00015004488) ENSNFUG00015004511 ENSNFUG00015004519 Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 566 brd1b (ENSKMAG00000000676) ftsj1 (ENSKMAG00000000645) ENSKMAG00000000627 acot19 (ENSKMAG00000000618) ENSKMAG00000000609 #22 Mangrove rivulus MODERN SPECIES 31 pphln1 (ENSKMAG00000012486) prickle1b (ENSKMAG00000012526) pus7l (ENSKMAG00000012571) ENSKMAG00000012599 ENSKMAG00000012615 ENSKMAG00000012638 ENSKMAG00000012657 lrrc17 (ENSKMAG00000012671) fgl2a (ENSKMAG00000012686) ENSKMAG00000012698 ENSKMAG00000012721 NAMPT (ENSKMAG00000012747) ENSKMAG00000012790 ATXN7L1 (ENSKMAG00000012825) znf800a (ENSKMAG00000012878) #20 GRM8 (ENSKMAG00000012924) #22 ENSKMAG00000013004 ENSKMAG00000013031 gpr37b (ENSKMAG00000013045) #26 TMEM229A (ENSKMAG00000013058) WASL (ENSKMAG00000013081) #29 LMOD2 (ENSKMAG00000013106) #30 asb15b (ENSKMAG00000013137) #31 ENSKMAG00000013209 ENSKMAG00000013239 ENSKMAG00000013272 ints13 (ENSKMAG00000013336) ANO6 (ENSKMAG00000013500) pwp1 (ENSKMAG00000013617) mrpl42 (ENSKMAG00000013671) ube2nb (ENSKMAG00000013684) Ovalentaria_B ANCESTRAL SPECIES 23 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT01100000263495.D.b.b.d ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000168331 ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00940000163454.b Cichlidae ANCESTRAL SPECIES 24 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT00940000163454.b ENSGT00940000164807.G.a.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 21 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT00940000154308.A.b.a.a ENSGT00390000002793 ENSGT00940000158969 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000181822 ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT00940000154308.A.b.a.a ENSGT00390000002793 ENSGT00940000158969 Haplochromini ANCESTRAL SPECIES 9 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000166983.c.a ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT00970000193614.a.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT00940000176275 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000166983.c.a ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00970000193614.a.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000174723 ENSGT00940000176275 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00390000002793 P. nyererei MODERN SPECIES 309 yaf2 (ENSPNYG00000008329) zcrb1 (ENSPNYG00000008344) pphln1 (ENSPNYG00000008386) prickle1b (ENSPNYG00000008404) pus7l (ENSPNYG00000008439) ENSPNYG00000008464 ENSPNYG00000008498 lrrc17 (ENSPNYG00000008518) fgl2a (ENSPNYG00000008535) ENSPNYG00000008554 ENSPNYG00000008581 NAMPT (ENSPNYG00000008621) ENSPNYG00000008681 ATXN7L1 (ENSPNYG00000008698) znf800a (ENSPNYG00000008726) #20 GRM8 (ENSPNYG00000008738) #22 ENSPNYG00000008770 gpr37b (ENSPNYG00000008788) #26 TMEM229A (ENSPNYG00000008807) spam1 (ENSPNYG00000008892) #27 WASL (ENSPNYG00000009106) #29 LMOD2 (ENSPNYG00000009147) #30 asb15b (ENSPNYG00000009179) #31 ENSPNYG00000009258 ENSPNYG00000009325 ENSPNYG00000009347 ENSPNYG00000009360 ENSPNYG00000009372 ENSPNYG00000009385 ENSPNYG00000009399 ints13 (ENSPNYG00000009427) Haplochromini_B ANCESTRAL SPECIES 11 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000166983.c.a ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00970000193614.a.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00970000193473 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00940000175977 ENSGT00390000018272.j ENSGT00940000172707.a ENSGT00950000182774.b.a.a.a ENSGT00940000154308.A.b.a.a ENSGT00390000002793 ENSGT00940000158969 ENSGT00390000017324 Eastern happy MODERN SPECIES 8 pphln1 (ENSACLG00000000988) prickle1b (ENSACLG00000000971) pus7l (ENSACLG00000000941) ENSACLG00000000932 ENSACLG00000000885 ENSACLG00000000860 lrrc17 (ENSACLG00000000857) fgl2a (ENSACLG00000000834) ENSACLG00000000809 ENSACLG00000000802 ENSACLG00000000775 NAMPT (ENSACLG00000000655) ENSACLG00000000645 ATXN7L1 (ENSACLG00000000567) znf800a (ENSACLG00000000485) #20 GRM8 (ENSACLG00000000386) #22 ENSACLG00000000322 ENSACLG00000000319 ENSACLG00000000308 gpr37b (ENSACLG00000000302) #26 TMEM229A (ENSACLG00000000293) ENSACLG00000000287 #27 ENSACLG00000000280 ENSACLG00000000186 LMOD2 (ENSACLG00000000160) #30 asb15b (ENSACLG00000000145) #31 ENSACLG00000000138 ENSACLG00000000119 ENSACLG00000000113 ENSACLG00000000102 ENSACLG00000000063 Zebra mbuna MODERN SPECIES 1099 pphln1 (ENSMZEG00005010874) prickle1b (ENSMZEG00005010859) pus7l (ENSMZEG00005010850) ENSMZEG00005010830 ENSMZEG00005010816 ENSMZEG00005010813 lrrc17 (ENSMZEG00005010807) fgl2a (ENSMZEG00005010800) ENSMZEG00005010793 ENSMZEG00005010782 NAMPT (ENSMZEG00005010766) ENSMZEG00005010751 ENSMZEG00005010742 ATXN7L1 (ENSMZEG00005010731) znf800a (ENSMZEG00005010713) #20 GRM8 (ENSMZEG00005010691) #22 ENSMZEG00005010673 ENSMZEG00005010616 ENSMZEG00005010608 gpr37b (ENSMZEG00005010607) #26 TMEM229A (ENSMZEG00005010603) ENSMZEG00005010410 #27 ENSMZEG00005008924 WASL (ENSMZEG00005008830) #29 LMOD2 (ENSMZEG00005008807) #30 asb15b (ENSMZEG00005008788) #31 ENSMZEG00005008768 ENSMZEG00005008751 ENSMZEG00005008742 ENSMZEG00005008729 ints13 (ENSMZEG00005008687) Burton s mouthbrooder MODERN SPECIES 585 ENSHBUG00000021225 lrrc17 (ENSHBUG00000021217) ccdc146 (ENSHBUG00000021200) fgl2a (ENSHBUG00000021176) GSAP (ENSHBUG00000021155) NAMPT (ENSHBUG00000021131) ENSHBUG00000021046 ENSHBUG00000021034 ENSHBUG00000020996 znf800a (ENSHBUG00000020979) #20 GRM8 (ENSHBUG00000020941) #22 ENSHBUG00000020900 Lyretail cichlid MODERN SPECIES 291 zcrb1 (ENSNBRG00000001430) pphln1 (ENSNBRG00000001457) prickle1b (ENSNBRG00000001472) pus7l (ENSNBRG00000001517) ENSNBRG00000001520 ENSNBRG00000001541 RAB19 (ENSNBRG00000001575) lrrc17 (ENSNBRG00000001601) fgl2a (ENSNBRG00000001631) ENSNBRG00000001645 NAMPT (ENSNBRG00000001688) ENSNBRG00000001751 ENSNBRG00000001780 ENSNBRG00000001808 znf800a (ENSNBRG00000001821) #20 GRM8 (ENSNBRG00000001866) #22 ENSNBRG00000001904 gpr37b (ENSNBRG00000001912) #26 TMEM229A (ENSNBRG00000001946) spam1 (ENSNBRG00000002003) #27 ENSNBRG00000002331 ENSNBRG00000002722 LMOD2 (ENSNBRG00000002758) #30 asb15b (ENSNBRG00000002785) #31 ENSNBRG00000002881 ENSNBRG00000002897 ENSNBRG00000002929 ENSNBRG00000002946 ENSNBRG00000002958 ENSNBRG00000002962 ints13 (ENSNBRG00000002980) Nile tilapia MODERN SPECIES 8 zcrb1 (ENSONIG00000016844) pphln1 (ENSONIG00000016846) prickle1b (ENSONIG00000016847) pus7l (ENSONIG00000016848) ENSONIG00000036545 ENSONIG00000039107 lrrc17 (ENSONIG00000016855) ccdc146 (ENSONIG00000016859) fgl2a (ENSONIG00000033531) GSAP (ENSONIG00000016864) NAMPT (ENSONIG00000016870) ENSONIG00000016872 ATXN7L1 (ENSONIG00000030508) ENSONIG00000035703 znf800a (ENSONIG00000016873) #20 GRM8 (ENSONIG00000016874) #22 ENSONIG00000016878 ENSONIG00000032780 gpr37b (ENSONIG00000011788) #26 TMEM229A (ENSONIG00000034822) spam1 (ENSONIG00000011787) #27 WASL (ENSONIG00000011783) #29 LMOD2 (ENSONIG00000011778) #30 asb15b (ENSONIG00000011775) #31 ENSONIG00000011774 ENSONIG00000011773 ENSONIG00000031195 ENSONIG00000035950 ints13 (ENSONIG00000011765) ANO6 (ENSONIG00000011756) pwp1 (ENSONIG00000011755) Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 543 brd1b (ENSACIG00000001571) ftsj1 (ENSACIG00000001541) ENSACIG00000001536 acot19 (ENSACIG00000001408) ENSACIG00000001399 #22 ENSACIG00000001388 Midas cichlid MODERN SPECIES 318 pus7l (ENSACIG00000016411) ENSACIG00000016475 ENSACIG00000016484 lrrc17 (ENSACIG00000016501) fgl2a (ENSACIG00000016520) ENSACIG00000016534 ENSACIG00000016581 NAMPT (ENSACIG00000016597) ENSACIG00000016637 ENSACIG00000016657 znf800a (ENSACIG00000016673) #20 GRM8 (ENSACIG00000016742) #22 ENSACIG00000016773 gpr37b (ENSACIG00000016786) #26 TMEM229A (ENSACIG00000016807) spam1 (ENSACIG00000016859) #27 WASL (ENSACIG00000017247) #29 ENSACIG00000017295 asb15b (ENSACIG00000017601) #31 ENSACIG00000017656 ENSACIG00000017669 ENSACIG00000017683 ENSACIG00000017713 ENSACIG00000017722 ENSACIG00000017752 ints13 (ENSACIG00000017762) ANO6 (ENSACIG00000017792) Pomacentridae ANCESTRAL SPECIES 40 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT00990000204361.d ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000176275 ENSGT00940000168331 ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00940000163454.b Bicolor damselfish MODERN SPECIES 1004 znf800a (ENSSPAG00000018280) #20 ENSSPAG00000018311 #22 ENSSPAG00000018350 ENSSPAG00000018363 Pomacentridae_A ANCESTRAL SPECIES 23 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000174996 ENSGT00940000166983.c.a ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000168532 ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000176275 ENSGT00940000168331 ENSGT00940000174723 ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00940000163454.b ENSGT00390000002793 Amphiprion ANCESTRAL SPECIES 19 ENSGT00730000111061 ENSGT00390000016228.a.a ENSGT00940000157529.i.b ENSGT00530000063554.b ENSGT00940000166983.c.a ENSGT00940000168547 ENSGT00940000156717.f ENSGT00940000156400.a ENSGT00940000157946.e ENSGT00530000063534.a ENSGT00390000012875 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00990000204361.c ENSGT00940000168532.k ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.b #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000018272.j ENSGT00950000182774.b.a.a.a ENSGT00940000176275 ENSGT00940000174723 ENSGT00940000154446.b.a.b ENSGT01030000234576.D.a.b.a.a.a.a.a.a.b ENSGT00940000163454.b Clown anemonefish MODERN SPECIES 1792 GRM8 (ENSAOCG00000024284) #22 ENSAOCG00000002132 Orange clownfish MODERN SPECIES 13 prickle1b (ENSAPEG00000018098) ENSAPEG00000018110 pus7l (ENSAPEG00000018131) ENSAPEG00000018151 ENSAPEG00000018164 ENSAPEG00000018181 lrrc17 (ENSAPEG00000018188) fgl2a (ENSAPEG00000018211) ENSAPEG00000018231 ENSAPEG00000018259 ENSAPEG00000018277 NAMPT (ENSAPEG00000018310) ENSAPEG00000018374 ATXN7L1 (ENSAPEG00000018390) znf800a (ENSAPEG00000018451) #20 GRM8 (ENSAPEG00000018478) #22 ENSAPEG00000018527 ENSAPEG00000018543 gpr37b (ENSAPEG00000018560) #26 TMEM229A (ENSAPEG00000018594) spam1 (ENSAPEG00000018622) #27 WASL (ENSAPEG00000018803) #29 LMOD2 (ENSAPEG00000018880) #30 asb15b (ENSAPEG00000018907) #31 ENSAPEG00000019052 ENSAPEG00000019106 ENSAPEG00000019115 ENSAPEG00000019121 ENSAPEG00000019131 ENSAPEG00000019143 ENSAPEG00000019161 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 2761 ENSAPOG00000000726 #22 Spiny chromis MODERN SPECIES 724 GRM8 (ENSAPOG00000014299) #22 ENSAPOG00000014182 Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00940000155728.o ENSGT00510000048519.b ENSGT00940000156628.d ENSGT01080000257336.b.e.b.a.a.c ENSGT00390000011863.d.a.b ENSGT01050000244841.A.b.b.a.b ENSGT00390000011239.i ENSGT00940000158160 ENSGT00390000002417 ENSGT00940000156858 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000177490 ENSGT00940000158612 ENSGT00390000008140 #20 ENSGT01030000234648.a.b.a.a.b.cb.b #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b #26 ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT01020000230364.a.a.b.b #28 ENSGT00730000110895.b.a.o.a #29 ENSGT00940000156567.a.a #30 ENSGT00940000157073.b #31 ENSGT00390000008099 #32 ENSGT01050000244841.A.b.b.a.a ENSGT00390000004586 ENSGT00550000074907.m ENSGT00390000011863.d.a.a ENSGT01080000257336.b.e.b.a.a.d ENSGT00940000156628.c Northern pike MODERN SPECIES 22 creb3l2 (ENSELUG00000016552) ssbp1 (ENSELUG00000016596) ENSELUG00000016678 zgc:162331 (ENSELUG00000016748) slc13a4 (ENSELUG00000016831) ##35 coa6 (ENSELUG00000016866) ENSELUG00000016969 ENSELUG00000033637 HBP1 (ENSELUG00000017031) PRKAR2B (ENSELUG00000017069) ENSELUG00000017091 pik3cg (ENSELUG00000017187) NAMPT (ENSELUG00000017244) SYPL1 (ENSELUG00000032755) ENSELUG00000000656 #20 GRM8 (ENSELUG00000017430) #22 ENSELUG00000017459 ENSELUG00000001501 ENSELUG00000017469 ENSELUG00000032310 gpr37b (ENSELUG00000017481) #26 TMEM229A (ENSELUG00000017484) spam1 (ENSELUG00000017497) #27 wasla (ENSELUG00000017543) #29 LMOD2 (ENSELUG00000017553) #30 asb15b (ENSELUG00000017571) #31 ENSELUG00000031104 ndufa5 (ENSELUG00000017605) #32 COG5 (ENSELUG00000017679) gpr22a (ENSELUG00000000692) dus4l (ENSELUG00000017740) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 623 ENSGT00940000166253.f ENSGT01030000234550.a.a.d.a.b.c ##35 ENSGT00390000004094.j ENSGT00940000155529.B.d.a.b ENSGT00390000011239.j.b ENSGT00940000158160.j.b ENSGT00940000156858.a ENSGT00940000153456.b.a ENSGT01030000234637.a.b.p ENSGT00940000158612.i ENSGT00390000008140.i.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b.h.b #26 ENSGT00390000010899.a.b.b.b.k.b Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000158094.eb ENSGT00940000157659.d ENSGT00390000002796.ib.a ENSGT00390000018424 ENSGT00940000166253.e ENSGT01030000234550.a.a.d.a.b.d ##35 ENSGT00390000004094.i ENSGT00940000155529.B.c ENSGT00390000011239.j.a ENSGT00940000158160.j.a ENSGT00940000156858.b ENSGT00940000153456.b.a.bb.a.a ENSGT01030000234637.a.b.p ENSGT00940000158612.i ENSGT00390000008140.i.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.a #22 ENSGT00730000110895.b.a.o.a.c.a #29 ENSGT00940000156567.a.a.k #30 ENSGT00940000157073.b.i.a #31 ENSGT00390000008099.dc.b #32 ENSGT00940000157073.b.j #31 ENSGT00390000008099.cc #32 ENSGT01050000244841.A.b.b.a.a.e ENSGT00390000004586.a ENSGT00550000074907.m.a ENSGT00390000011863.d.a.a.d.b ENSGT01080000257336.b.e.b.a.a.d.c ENSGT00940000156628.c.e ENSGT00510000048519.a.c ENSGT00940000155728.p.h.b ENSGT00940000161702 Oncorhynchus ANCESTRAL SPECIES 22 ENSGT00940000157659.d ENSGT00390000002796.ib.a ENSGT00390000018424 ENSGT00940000166253.e ENSGT01030000234550.a.a.d.a.b.d ##35 ENSGT00390000004094.i ENSGT00940000155529.B.c ENSGT00390000011239.j.b.b ENSGT00940000158160.j.a ENSGT00390000002417 ENSGT00940000156858.b ENSGT00940000153456.b.a.bb.a.a ENSGT01030000234637.a.b.p ENSGT00940000158612.i ENSGT00390000008140.i.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b.g.b #26 ENSGT00390000010899.a.b.b.b.k.a.a ENSGT00730000110895.b.a.o.a.c.a #29 ENSGT00940000156567.a.a.k #30 ENSGT00940000157073.b.i.a #31 ENSGT00390000008099.dc.b #32 ENSGT01050000244841.A.b.b.a.a.e ENSGT00550000074907.m.a ENSGT00390000011863.d.a.a.d.b ENSGT01080000257336.b.e.b.a.a.d.c ENSGT00940000156628.c.e ENSGT00510000048519.a.c ENSGT00940000155728.p.h.b ENSGT00940000154471.a.b.a.b.u.b.d Rainbow trout MODERN SPECIES 6 creb3l2 (ENSOMYG00000041524) ssbp1 (ENSOMYG00000041550) ENSOMYG00000041571 ENSOMYG00000041576 slc13a4 (ENSOMYG00000041597) ##35 coa6 (ENSOMYG00000041922) ENSOMYG00000041928 HBP1 (ENSOMYG00000041943) PRKAR2B (ENSOMYG00000042055) ENSOMYG00000042063 pik3cg (ENSOMYG00000042114) NAMPT (ENSOMYG00000042504) SYPL1 (ENSOMYG00000042646) ATXN7L1 (ENSOMYG00000042651) ENSOMYG00000042660 #20 GRM8 (ENSOMYG00000058178) #22 ENSOMYG00000042673 ENSOMYG00000049367 ENSOMYG00000069986 gpr37b (ENSOMYG00000032330) #26 ENSOMYG00000032349 ENSOMYG00000032359 #27 WASL (ENSOMYG00000032371) #29 LMOD2 (ENSOMYG00000051744) #30 ASB15 (ENSOMYG00000032463) #31 NDUFA5 (ENSOMYG00000032627) #32 ENSOMYG00000060441 ENSOMYG00000006744 gpr22a (ENSOMYG00000032635) dus4l (ENSOMYG00000032643) bcap29 (ENSOMYG00000032669) Oncorhynchus_a ANCESTRAL SPECIES 31 ENSGT00940000157659.d ENSGT00390000002796.ib.a ENSGT00390000018424 ENSGT00940000166253.e ENSGT01030000234550.a.a.d.a.b.d ##35 ENSGT00390000004094.i ENSGT00940000155529.B.c ENSGT00390000011239.j.b.b ENSGT00940000158160.j.a ENSGT00390000002417 ENSGT00940000156858.b ENSGT00940000153456.b.a.bb.a.a ENSGT01030000234637.a.b.p ENSGT00940000158612.i ENSGT00390000008140.i.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b.g.b #26 ENSGT00730000110895.b.a.o.a.c.a #29 ENSGT00940000156567.a.a.k #30 ENSGT00940000157073.b.i.a #31 ENSGT00390000008099.dc.b #32 ENSGT01050000244841.A.b.b.a.a.e ENSGT00390000004586.a ENSGT00550000074907.m.a ENSGT01080000257336.b.e.b.a.a.d.c ENSGT00940000156628.c.e ENSGT00510000048519.a.c ENSGT00940000155728.p.h.b ENSGT00940000154471.a.b.a.b.u.b.d ENSGT00940000155765.s.b.f.b Coho salmon MODERN SPECIES 10 creb3l2 (ENSOKIG00005028990) ssbp1 (ENSOKIG00005028968) ENSOKIG00005028948 ENSOKIG00005028937 slc13a4 (ENSOKIG00005027925) ##35 coa6 (ENSOKIG00005027830) ENSOKIG00005027211 HBP1 (ENSOKIG00005027101) PRKAR2B (ENSOKIG00005027080) ENSOKIG00005027058 pik3cg (ENSOKIG00005026920) NAMPT (ENSOKIG00005026646) SYPL1 (ENSOKIG00005026607) ATXN7L1 (ENSOKIG00005026583) znf800a (ENSOKIG00005026570) #20 GRM8 (ENSOKIG00005025521) #22 ENSOKIG00005025412 ENSOKIG00005025397 gpr37b (ENSOKIG00005025387) #26 TMEM229A (ENSOKIG00005025364) ENSOKIG00005025308 #27 WASL (ENSOKIG00005025176) #29 LMOD2 (ENSOKIG00005025147) #30 asb15b (ENSOKIG00005025130) #31 NDUFA5 (ENSOKIG00005025114) #32 gpr22a (ENSOKIG00005025090) ENSOKIG00005025082 cog5 (ENSOKIG00005025055) dus4l (ENSOKIG00005025009) slco1c1 (ENSOKIG00005024874) PDE3A (ENSOKIG00005024788) Chinook salmon MODERN SPECIES 8 creb3l2 (ENSOTSG00005026934) ssbp1 (ENSOTSG00005026937) ENSOTSG00005026938 ENSOTSG00005026941 slc13a4 (ENSOTSG00005026954) ##35 ENSOTSG00005027742 ENSOTSG00005027744 HBP1 (ENSOTSG00005027746) PRKAR2B (ENSOTSG00005027747) ENSOTSG00005027749 pik3cg (ENSOTSG00005027750) NAMPT (ENSOTSG00005027911) SYPL1 (ENSOTSG00005029314) ATXN7L1 (ENSOTSG00005029315) znf800a (ENSOTSG00005029316) #20 GRM8 (ENSOTSG00005029318) #22 ENSOTSG00005029321 gpr37b (ENSOTSG00005029322) #26 TMEM229A (ENSOTSG00005029323) spam1 (ENSOTSG00005029325) #27 WASL (ENSOTSG00005029327) #29 LMOD2 (ENSOTSG00005029357) #30 asb15b (ENSOTSG00005029359) #31 ndufa5 (ENSOTSG00005029360) #32 gpr22a (ENSOTSG00005029362) dus4l (ENSOTSG00005029364) bcap29 (ENSOTSG00005029365) slco1c1 (ENSOTSG00005029368) PDE3A (ENSOTSG00005029434) ENSOTSG00005029458 ENSOTSG00005029460 Salmo ANCESTRAL SPECIES 46 ENSGT00940000157659.d ENSGT00390000002796.ib.a ENSGT00390000018424 ENSGT00940000166253.e ENSGT01030000234550.a.a.d.a.b.d ##35 ENSGT00390000004094.i ENSGT00940000155529.B.c ENSGT00390000011239.j.a ENSGT00940000158160.j.a ENSGT00940000156858.b ENSGT00940000153456.b.a.bb.b ENSGT01030000234637.a.b.p ENSGT00940000177490 ENSGT00940000158612.i ENSGT00390000008140.i.a #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.a #22 ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b.h.b #26 ENSGT00390000010899.a.b.b.b.k.b ENSGT01020000230364.a.a.b.a.y.a #27 ENSGT00730000110895.b.a.o.a.c.a #29 ENSGT00940000156567.a.a.k #30 ENSGT00940000157073.b.i.a #31 ENSGT00390000008099.dc.a.a #32 ENSGT01050000244841.A.b.b.a.a.e ENSGT00390000004586.a ENSGT00550000074907.m.a ENSGT00390000011863.d.a.a.d.a.a ENSGT01080000257336.b.e.b.a.a.d.c ENSGT00940000156628.c.e ENSGT00510000048519.a.d.a River trout MODERN SPECIES 34 ssbp1 (ENSSTUG00000042372) ENSSTUG00000042344 ENSSTUG00000042335 slc13a4 (ENSSTUG00000041180) ##35 coa6 (ENSSTUG00000041120) ENSSTUG00000040106 HBP1 (ENSSTUG00000040042) PRKAR2B (ENSSTUG00000039919) ENSSTUG00000039915 pik3cg (ENSSTUG00000039769) NAMPT (ENSSTUG00000039504) SYPL1 (ENSSTUG00000049543) ENSSTUG00000049541 ATXN7L1 (ENSSTUG00000049536) znf800a (ENSSTUG00000049521) #20 GRM8 (ENSSTUG00000049362) #22 ENSSTUG00000049335 gpr37b (ENSSTUG00000049324) #26 TMEM229A (ENSSTUG00000049315) spam1 (ENSSTUG00000049308) #27 wasla (ENSSTUG00000049302) #29 LMOD2 (ENSSTUG00000049301) #30 asb15b (ENSSTUG00000049244) #31 ndufa5 (ENSSTUG00000049236) #32 gpr22a (ENSSTUG00000049233) COG5 (ENSSTUG00000049072) dus4l (ENSSTUG00000049055) slco1c1 (ENSSTUG00000048998) PDE3A (ENSSTUG00000048887) ENSSTUG00000048878 ENSSTUG00000048874 Atlantic salmon MODERN SPECIES 8 creb3l2 (ENSSSAG00000073100) ssbp1 (ENSSSAG00000073105) ENSSSAG00000073114 ENSSSAG00000111136 slc13a4 (ENSSSAG00000073127) ##35 CA031 (ENSSSAG00000073369) ENSSSAG00000073419 HBP1 (ENSSSAG00000073585) PRKAR2B (ENSSSAG00000073587) pik3cg (ENSSSAG00000073601) NAMPT (ENSSSAG00000073927) SYPL1 (ENSSSAG00000059353) ENSSSAG00000074009 ENSSSAG00000074010 ENSSSAG00000074016 #20 GRM8 (ENSSSAG00000074033) #22 ENSSSAG00000095575 ENSSSAG00000100323 ENSSSAG00000100805 gpr37b (ENSSSAG00000089538) #26 TMEM229A (ENSSSAG00000074186) ENSSSAG00000074188 #27 WASL (ENSSSAG00000074191) #29 ENSSSAG00000095446 #31 NDUFA5 (ENSSSAG00000074231) #32 COG5 (ENSSSAG00000074251) gpr22a (ENSSSAG00000074301) dus4l (ENSSSAG00000074307) bcap29 (ENSSSAG00000088023) slco1c1 (ENSSSAG00000074331) PDE3A (ENSSSAG00000074363) Huchen MODERN SPECIES 1340 GRM8 (ENSHHUG00000022756) #22 ENSHHUG00000022758 ENSHHUG00000022767 ENSHHUG00000022775 ENSHHUG00000022798 ENSHHUG00000022804 Salmoninae ANCESTRAL SPECIES 167 ENSGT01030000234637.a.b.o ENSGT00940000177490 ENSGT00940000158612.j ENSGT00390000008140.i.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.b #22 ENSGT01100000263518.B.b.b.b.g #26 ENSGT00390000010899.a.b.b.b.k.a.b ENSGT01100000263518.B.b.b.b.h.a #26 ENSGT00390000010899.a.b.b.b.l ENSGT00730000110895.b.a.o.a.c.b #29 ENSGT00940000156567.a.a.l #30 ENSGT00940000157073.b #31 ENSGT00390000008099.cc #32 ENSGT00390000008099.dc.a.b #32 ENSGT00390000004586.b ENSGT01050000244841.A.b.b.a.a.f ENSGT00550000074907.m.b ENSGT00390000011863.d.a.a.c ENSGT01080000257336.b.e.b.a.a.d.d ENSGT00940000156628.c.f Huchen DUPLICATION Huchen MODERN SPECIES 5017 ENSHHUG00000049043 #22 ENSHHUG00000049046 #22 Huchen MODERN SPECIES 5017 ENSHHUG00000049043 #22 ENSHHUG00000049046 #22 Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00940000157659.c ENSGT00390000002796.ib.b ENSGT00940000166253.f ENSGT01030000234550.a.a.d.a.b.c ##35 ENSGT00390000004094.j ENSGT00940000155529.B.d.a.b ENSGT00390000011239.j.b ENSGT00940000158160.j.b ENSGT00390000002417 ENSGT00940000156858.a ENSGT00940000153456.b.a.bb.a.b ENSGT01030000234637.a.b.o ENSGT00940000177490 ENSGT00940000158612.j ENSGT00390000008140.i.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.b #22 ENSGT01100000263518.B.b.b.b.g #26 ENSGT00390000010899.a.b.b.b.l ENSGT00730000110895.b.a.o.a.c.b #29 ENSGT00940000156567.a.a.l #30 ENSGT00940000157073.b.i.b #31 ENSGT00390000008099.dc.a.b #32 ENSGT00390000004586.b ENSGT01050000244841.A.b.b.a.a.f ENSGT00550000074907.m.b ENSGT00390000011863.d.a.a.c ENSGT01080000257336.b.e.b.a.a.d.d ENSGT00940000156628.c.f ENSGT00510000048519.a.d.a ENSGT00510000048519.a.d.b ENSGT00940000155728.p.h.a Salmo ANCESTRAL SPECIES 25 ENSGT00940000158094.db ENSGT00940000157659.c ENSGT00390000002796.ib.b ENSGT00940000166253.f ENSGT01030000234550.a.a.d.a.b.c ##35 ENSGT00390000004094.j ENSGT00940000155529.B.d.b ENSGT00390000011239.j.b ENSGT00390000002417 ENSGT00940000158160.j.b ENSGT00940000156858.a ENSGT00940000153456.b.a.bb.a.b ENSGT01030000234637.a.b.o ENSGT00940000158612.j ENSGT00390000008140.i.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.b #22 ENSGT01100000263518.B.b.b.b.h.a #26 ENSGT00390000010899.a.b.b.b.l ENSGT00730000110895.b.a.o.a.c.b #29 ENSGT00940000156567.a.a.l #30 ENSGT00940000157073.b.i.b #31 ENSGT00390000008099.cc #32 ENSGT00390000004586.b ENSGT01050000244841.A.b.b.a.a.f ENSGT00550000074907.m.b ENSGT00390000011863.d.a.a.c ENSGT01080000257336.b.e.b.a.a.d.d ENSGT00940000156628.c.f ENSGT00510000048519.a.d.b ENSGT00940000155728.p.h.a ENSGT00940000165209.f.a Atlantic salmon MODERN SPECIES 26 ssbp1 (ENSSSAG00000055342) ENSSSAG00000111577 ENSSSAG00000107921 slc13a4 (ENSSSAG00000055377) ##35 ENSSSAG00000105698 ENSSSAG00000087012 ENSSSAG00000055514 HBP1 (ENSSSAG00000098080) PRKAR2B (ENSSSAG00000057285) ENSSSAG00000104552 pik3cg (ENSSSAG00000057322) NAMPT (ENSSSAG00000059174) SYPL1 (ENSSSAG00000074006) ATXN7L1 (ENSSSAG00000059403) ZNF800 (ENSSSAG00000059430) #20 GRM8 (ENSSSAG00000059602) #22 gpr37b (ENSSSAG00000121851) #26 ENSSSAG00000066293 ENSSSAG00000066299 asb15b (ENSSSAG00000087259) #31 ENSSSAG00000088349 #32 COG5 (ENSSSAG00000066381) gpr22a (ENSSSAG00000066761) dus4l (ENSSSAG00000066770) bcap29 (ENSSSAG00000118080) slco1c1 (ENSSSAG00000066819) bcap29 (ENSSSAG00000074312) ENSSSAG00000110946 PDE3A (ENSSSAG00000066834) ENSSSAG00000087782 aebp2 (ENSSSAG00000066846) River trout MODERN SPECIES 38 creb3l2 (ENSSTUG00000022617) ssbp1 (ENSSTUG00000022704) ENSSTUG00000022764 ENSSTUG00000022772 slc13a4 (ENSSTUG00000022802) ##35 coa6 (ENSSTUG00000023358) ENSSTUG00000023376 HBP1 (ENSSTUG00000023964) PRKAR2B (ENSSTUG00000023985) pik3cg (ENSSTUG00000024034) NAMPT (ENSSTUG00000024831) SYPL1 (ENSSTUG00000026675) ENSSTUG00000026709 ATXN7L1 (ENSSTUG00000026688) znf800a (ENSSTUG00000026713) #20 GRM8 (ENSSTUG00000026735) #22 gpr37b (ENSSTUG00000027421) #26 TMEM229A (ENSSTUG00000027425) wasla (ENSSTUG00000027442) #29 LMOD2 (ENSSTUG00000027492) #30 asb15b (ENSSTUG00000027500) #31 ndufa5 (ENSSTUG00000027517) #32 COG5 (ENSSTUG00000027534) gpr22a (ENSSTUG00000027855) bcap29 (ENSSTUG00000027875) dus4l (ENSSTUG00000000508) slco1c1 (ENSSTUG00000001952) PDE3A (ENSSTUG00000001994) plekha5 (ENSSTUG00000002046) ENSSTUG00000002181 ENSSTUG00000002366 Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00940000158094.db ENSGT00940000157659.c ENSGT00390000002796.ib.b ENSGT00940000166253.f ENSGT01030000234550.a.a.d.a.b.c ##35 ENSGT00390000004094.j ENSGT00940000155529.B.d.a.b ENSGT00390000011239.j.b.a ENSGT00940000158160.j.b ENSGT00940000156858.a ENSGT00940000153456.b.a.bb.a.b ENSGT01030000234637.a.b.o ENSGT00940000177490 ENSGT00940000158612.j ENSGT00390000008140.i.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.b #22 ENSGT01100000263518.B.b.b.b.g.a #26 ENSGT00390000010899.a.b.b.b.l ENSGT00970000193473 ENSGT00730000110895.b.a.o.a.c.b #29 ENSGT00940000156567.a.a.l #30 ENSGT00940000157073.b.i.b #31 ENSGT00390000008099.cc #32 ENSGT01050000244841.A.b.b.a.a.f ENSGT00390000004586.b ENSGT00550000074907.m.b ENSGT00390000011863.d.a.a.c ENSGT01080000257336.b.e.b.a.a.d.d ENSGT00940000156628.c.f ENSGT00510000048519.a.d.a ENSGT00940000155728.p.h.a Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00940000158094.db ENSGT00940000157659.c ENSGT00390000002796.ib.b ENSGT00940000166253.f ENSGT01030000234550.a.a.d.a.b.c ##35 ENSGT00390000004094.j ENSGT00940000155529.B.d.a.b ENSGT00390000011239.j.b.a ENSGT00940000158160.j.b ENSGT00940000156858.a ENSGT00940000153456.b.a.bb.a.b ENSGT01030000234637.a.b.o ENSGT00940000177490 ENSGT00940000158612.j ENSGT00390000008140.i.b #20 ENSGT01030000234648.a.b.a.a.b.cb.b.s.b #22 ENSGT01100000263518.B.b.b.b.g.a #26 ENSGT00390000010899.a.b.b.b.l ENSGT00730000110895.b.a.o.a.c.b #29 ENSGT00940000156567.a.a.l #30 ENSGT00940000157073.b.i.b #31 ENSGT00390000008099.cc #32 ENSGT01050000244841.A.b.b.a.a.f ENSGT00390000004586.b ENSGT00550000074907.m.b ENSGT00390000011863.d.a.a.c ENSGT01080000257336.b.e.b.a.a.d.d ENSGT00940000156628.c.f ENSGT00510000048519.a.d.a ENSGT00940000155728.p.h.a ENSGT00940000165209.f.a Coho salmon MODERN SPECIES 29 creb3l2 (ENSOKIG00005003650) ssbp1 (ENSOKIG00005003642) ENSOKIG00005003638 slc13a4 (ENSOKIG00005003245) ##35 coa6 (ENSOKIG00005003187) ENSOKIG00005002668 ENSOKIG00005002589 HBP1 (ENSOKIG00005002563) PRKAR2B (ENSOKIG00005002519) pik3cg (ENSOKIG00005002076) NAMPT (ENSOKIG00005001911) SYPL1 (ENSOKIG00005001845) ENSOKIG00005001837 ATXN7L1 (ENSOKIG00005018278) ZNF800 (ENSOKIG00005018265) #20 GRM8 (ENSOKIG00005017194) #22 gpr37b (ENSOKIG00005017137) #26 TMEM229A (ENSOKIG00005017123) ENSOKIG00005017099 LMOD2 (ENSOKIG00005017082) #30 asb15b (ENSOKIG00005017048) #31 ndufa5 (ENSOKIG00005017036) #32 gpr22a (ENSOKIG00005017020) COG5 (ENSOKIG00005016723) dus4l (ENSOKIG00005016687) bcap29 (ENSOKIG00005016665) slco1c1 (ENSOKIG00005016633) PDE3A (ENSOKIG00005016625) aebp2 (ENSOKIG00005016610) plekha5 (ENSOKIG00005016501) ENSOKIG00005016466 Chinook salmon MODERN SPECIES 6 dock4b (ENSOTSG00005018274) ENSOTSG00005018114 creb3l2 (ENSOTSG00005018108) ssbp1 (ENSOTSG00005018106) ENSOTSG00005018105 slc13a4 (ENSOTSG00005017112) ##35 coa6 (ENSOTSG00005017107) ENSOTSG00005017105 HBP1 (ENSOTSG00005017099) PRKAR2B (ENSOTSG00005017076) pik3cg (ENSOTSG00005016600) NAMPT (ENSOTSG00005016560) SYPL1 (ENSOTSG00005016558) ATXN7L1 (ENSOTSG00005016557) znf800a (ENSOTSG00005016555) #20 GRM8 (ENSOTSG00005016553) #22 gpr37b (ENSOTSG00005016551) #26 TMEM229A (ENSOTSG00005016549) WASL (ENSOTSG00005016483) #29 LMOD2 (ENSOTSG00005016475) #30 asb15b (ENSOTSG00005016472) #31 ndufa5 (ENSOTSG00005016469) #32 gpr22a (ENSOTSG00005016463) COG5 (ENSOTSG00005014576) dus4l (ENSOTSG00005014569) bcap29 (ENSOTSG00005014562) slco1c1 (ENSOTSG00005014553) PDE3A (ENSOTSG00005014468) aebp2 (ENSOTSG00005014458) ENSOTSG00005014453 plekha5 (ENSOTSG00005014450) Rainbow trout MODERN SPECIES 13 ENSOMYG00000045396 creb3l2 (ENSOMYG00000045344) ssbp1 (ENSOMYG00000045332) ENSOMYG00000062020 slc13a4 (ENSOMYG00000045311) ##35 cin (ENSOMYG00000045303) ENSOMYG00000045285 HBP1 (ENSOMYG00000045282) PRKAR2B (ENSOMYG00000045266) pik3cg (ENSOMYG00000045201) NAMPT (ENSOMYG00000045093) SYPL1 (ENSOMYG00000045076) ENSOMYG00000045073 ATXN7L1 (ENSOMYG00000045071) ZNF800 (ENSOMYG00000045068) #20 GRM8 (ENSOMYG00000044731) #22 gpr37b (ENSOMYG00000044695) #26 ENSOMYG00000044691 ENSOMYG00000044678 LMOD2 (ENSOMYG00000044669) #30 asb15b (ENSOMYG00000044663) #31 NDUFA5 (ENSOMYG00000044659) #32 gpr22a (ENSOMYG00000044657) COG5 (ENSOMYG00000044613) dus4l (ENSOMYG00000044582) bcap29 (ENSOMYG00000044573) slco1c1 (ENSOMYG00000044556) PDE3A (ENSOMYG00000044522) aebp2 (ENSOMYG00000044501) ENSOMYG00000071244 plekha5 (ENSOMYG00000044459) Salmoninae ANCESTRAL SPECIES 1588 ENSGT00390000008140.j #20 ENSGT01030000234648.a.b.a.a.b.cb.b.t #22 Huchen DUPLICATION Huchen MODERN SPECIES 1791 brd1b (ENSHHUG00000004630) ENSHHUG00000004623 ENSHHUG00000004608 ENSHHUG00000004598 #22 Huchen MODERN SPECIES 2014 ENSHHUG00000023923 ENSHHUG00000023931 znf800a (ENSHHUG00000023936) #20 ENSHHUG00000023943 #22 Huchen DUPLICATION Huchen MODERN SPECIES 4597 ENSHHUG00000042380 #22 GRM8 (ENSHHUG00000042385) #22 Huchen MODERN SPECIES 4597 ENSHHUG00000042380 #22 GRM8 (ENSHHUG00000042385) #22 Elephant shark MODERN SPECIES 1548 gpr37b (ENSCMIG00000019849) #26 TMEM229A (ENSCMIG00000019850) ENSCMIG00000019852 #27 hyal6 (ENSCMIG00000019853) ##28 waslb (ENSCMIG00000019857) #29 lmod2a (ENSCMIG00000019859) #30 asb15 (ENSCMIG00000019860) #31 ndufa5 (ENSCMIG00000019863) #32 ENSCMIG00000019864 #34 slc13a1 (ENSCMIG00000019868) #35 large1 (ENSCMIG00000019872) ENSCMIG00000019877 ENSCMIG00000019879 ENSCMIG00000019880 ZNF800 (ENSCMIG00000019882) #20 grm8b (ENSCMIG00000019883) #22 ENSCMIG00000019884 #24 ENSCMIG00000019885 tbxas1 (ENSCMIG00000019887) hipk2 (ENSCMIG00000019889) cnot4b (ENSCMIG00000019898) tmem178ba (ENSCMIG00000019900) mrps33 (ENSCMIG00000019901) braf (ENSCMIG00000019907) wee2 (ENSCMIG00000019911) ENSCMIG00000019913 ENSCMIG00000019915 amn1 (ENSCMIG00000000278) ENSCMIG00000000292 dennd5b (ENSCMIG00000000649) sinhcaf (ENSCMIG00000001200) Cyclostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.b #22 Hagfish MODERN SPECIES 1248 ENSEBUG00000009007 #22 ENSEBUG00000014427 ##22 ENSEBUG00000008205 ##22 edem1 (ENSEBUG00000005117) ENSEBUG00000001514 ctsc (ENSEBUG00000003805) ENSEBUG00000002762 ENSEBUG00000010228 Vertebrata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Elephant shark MODERN SPECIES 1518 ENSCMIG00000001474 ENSCMIG00000001465 RNF122 (ENSCMIG00000001449) ENSCMIG00000001435 opn1mw3 (ENSCMIG00000001426) ENSCMIG00000001419 ENSCMIG00000001414 ENSCMIG00000001407 ENSCMIG00000001401 ENSCMIG00000001396 ENSCMIG00000001387 nudt3a (ENSCMIG00000001383) ENSCMIG00000001379 itpr3 (ENSCMIG00000001206) ENSCMIG00000001083 ENSCMIG00000001079 ##22 GPR37L1 (ENSCMIG00000001074) ##26 arl8a (ENSCMIG00000001067) ube2t (ENSCMIG00000001059) LGR6 (ENSCMIG00000001050) ENSCMIG00000001039 ENSCMIG00000001033 ENSCMIG00000001024 ENSCMIG00000001006 ENSCMIG00000000992 ENSCMIG00000000988 ENSCMIG00000000982 ENSCMIG00000000975 TNNI1 (ENSCMIG00000000968) phlda3 (ENSCMIG00000000966) csrp1 (ENSCMIG00000000955) Euteleostomi ANCESTRAL SPECIES 855 ENSGT00940000157392 ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 Actinopterygii ANCESTRAL SPECIES 486 ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000157067 ENSGT00940000166065 ENSGT00940000157586 ENSGT00940000162700 Reedfish DUPLICATION Reedfish MODERN SPECIES slc26a3.2 (ENSECRG00000003681) slc26a4 (ENSECRG00000003515) bcap29 (ENSECRG00000003504) dus4l (ENSECRG00000003491) ENSECRG00000003480 COG5 (ENSECRG00000003463) hbp1 (ENSECRG00000003450) PRKAR2B (ENSECRG00000003359) pik3cg (ENSECRG00000003338) NAMPT (ENSECRG00000003323) SYPL1 (ENSECRG00000003308) CDHR3 (ENSECRG00000003289) ATXN7L1 (ENSECRG00000003273) EFCAB10 (ENSECRG00000003263) znf800a (ENSECRG00000003256) #20 ENSECRG00000003238 ##22 grm8b (ENSECRG00000003042) #22 pot1 (ENSECRG00000002972) #24 gpr37b (ENSECRG00000002942) #26 TMEM229A (ENSECRG00000002931) ENSECRG00000002918 SPAM1 (ENSECRG00000002908) #27 ENSECRG00000002772 #27 spam1 (ENSECRG00000002441) #27 HYAL4 (ENSECRG00000002309) #28 hyal6 (ENSECRG00000001758) ##28 waslb (ENSECRG00000001674) #29 lmod2a (ENSECRG00000001647) #30 asb15b (ENSECRG00000001629) #31 ndufa5 (ENSECRG00000001619) #32 IQUB (ENSECRG00000001604) #34 Reedfish MODERN SPECIES 11 ENSECRG00000003394 ANKS1A (ENSECRG00000003332) taf11 (ENSECRG00000003290) ENSECRG00000003278 ENSECRG00000003258 snrpc (ENSECRG00000003247) ilrun (ENSECRG00000003230) SPDEF (ENSECRG00000003212) pacsin1a (ENSECRG00000003188) rps10 (ENSECRG00000003169) nudt3a (ENSECRG00000003163) ENSECRG00000003153 ENSECRG00000003138 hmga1a (ENSECRG00000003125) ENSECRG00000003114 ##22 ENSECRG00000003034 ##22 ENSECRG00000003001 ENSECRG00000002973 ENSECRG00000002950 ENSECRG00000002941 ENSECRG00000002925 PKP1 (ENSECRG00000002897) ENSECRG00000002873 TNNI1 (ENSECRG00000002839) phlda3 (ENSECRG00000002824) csrp1a (ENSECRG00000002812) NAV1 (ENSECRG00000002797) mybpha (ENSECRG00000002165) smpd2a (ENSECRG00000002020) TEAD3 (ENSECRG00000001969) ENSECRG00000001924 Reedfish MODERN SPECIES 11 ENSECRG00000003404 ENSECRG00000003394 ANKS1A (ENSECRG00000003332) taf11 (ENSECRG00000003290) ENSECRG00000003278 ENSECRG00000003258 snrpc (ENSECRG00000003247) ilrun (ENSECRG00000003230) SPDEF (ENSECRG00000003212) pacsin1a (ENSECRG00000003188) rps10 (ENSECRG00000003169) nudt3a (ENSECRG00000003163) ENSECRG00000003153 ENSECRG00000003138 hmga1a (ENSECRG00000003125) ENSECRG00000003114 ##22 ENSECRG00000003034 ##22 ENSECRG00000003001 ENSECRG00000002973 ENSECRG00000002950 ENSECRG00000002941 ENSECRG00000002925 PKP1 (ENSECRG00000002897) ENSECRG00000002873 TNNI1 (ENSECRG00000002839) phlda3 (ENSECRG00000002824) csrp1a (ENSECRG00000002812) NAV1 (ENSECRG00000002797) mybpha (ENSECRG00000002165) smpd2a (ENSECRG00000002020) TEAD3 (ENSECRG00000001969) Neopterygii ANCESTRAL SPECIES 289 ENSGT00940000157661 ENSGT01050000244857.A.a.b ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160123 ENSGT00390000007101.d.b ENSGT00940000154133.A ENSGT00940000153903.a.b.b ENSGT00940000161238 ENSGT00950000182885.C.a ENSGT00940000160745 ENSGT00390000007739 Spotted gar MODERN SPECIES 669 rnpep (ENSLOCG00000010074) scube3 (ENSLOCG00000010047) TCP11X2 (ENSLOCG00000010042) ANKS1A (ENSLOCG00000010031) taf11 (ENSLOCG00000010021) BLTP3A (ENSLOCG00000010005) ENSLOCG00000009999 ilrun (ENSLOCG00000009988) SPDEF (ENSLOCG00000009979) pacsin1a (ENSLOCG00000009969) rps10 (ENSLOCG00000009959) nudt3a (ENSLOCG00000009949) ENSLOCG00000009945 SMIM29 (ENSLOCG00000009940) hmga1a (ENSLOCG00000009932) GRM4 (ENSLOCG00000009910) ##22 ENSLOCG00000009899 ENSLOCG00000009895 ENSLOCG00000009888 ENSLOCG00000009878 ENSLOCG00000009867 ENSLOCG00000009857 ENSLOCG00000009848 ENSLOCG00000009840 PKP1 (ENSLOCG00000009825) tnnt2a (ENSLOCG00000009812) lad1 (ENSLOCG00000009808) TNNI1 (ENSLOCG00000009801) phlda3 (ENSLOCG00000018057) csrp1a (ENSLOCG00000009788) NAV1 (ENSLOCG00000009769) Osteoglossocephalai ANCESTRAL SPECIES 246 ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a.c ENSGT00950000182973.a.c.a.d ENSGT00440000034918 ENSGT00940000157882 ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160123.e.b ENSGT00940000166065.a ENSGT00940000157586.e Osteoglossiformes ANCESTRAL SPECIES 555 ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160123.e.b.c.a ENSGT00940000160123.e.b.d P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 285 ENSPKIG00000002975 ENSPKIG00000002985 ENSPKIG00000003006 ENSPKIG00000003025 ENSPKIG00000003046 RBM15 (ENSPKIG00000003067) slc6a17 (ENSPKIG00000003085) snrpc (ENSPKIG00000003136) ilrun (ENSPKIG00000003195) SPDEF (ENSPKIG00000003229) pacsin1b (ENSPKIG00000003257) rps10 (ENSPKIG00000003321) NUDT3 (ENSPKIG00000003355) ENSPKIG00000003372 ENSPKIG00000003388 GRM4 (ENSPKIG00000003411) ##22 ENSPKIG00000003489 ENSPKIG00000003670 ENSPKIG00000003823 ENSPKIG00000003908 P. kingsleyae MODERN SPECIES 59 sarnp (ENSPKIG00000002212) PFKFB2 (ENSPKIG00000002071) ENSPKIG00000001967 ENSPKIG00000001924 scube3 (ENSPKIG00000001868) ANKS1A (ENSPKIG00000001810) BLTP3A (ENSPKIG00000001733) SNRPC (ENSPKIG00000001671) ILRUN (ENSPKIG00000001636) SPDEF (ENSPKIG00000001617) pacsin1a (ENSPKIG00000001540) RPS10 (ENSPKIG00000001472) nudt3a (ENSPKIG00000001412) SMIM29 (ENSPKIG00000001373) hmga1a (ENSPKIG00000001356) GRM4 (ENSPKIG00000001301) ##22 Asian bonytongue MODERN SPECIES 10 ENSSFOG00015028954 ENSSFOG00015030945 scube3 (ENSSFOG00015022325) ANKS1A (ENSSFOG00015030366) BLTP3A (ENSSFOG00015022390) SNRPC (ENSSFOG00015022422) ILRUN (ENSSFOG00015024501) SPDEF (ENSSFOG00015022446) pacsin1a (ENSSFOG00015027372) rps10 (ENSSFOG00015024890) nudt3a (ENSSFOG00015022497) ENSSFOG00015031819 SMIM29 (ENSSFOG00015024775) hmga1a (ENSSFOG00015031448) ENSSFOG00015022548 GRM4 (ENSSFOG00015022554) ##22 ENSSFOG00015022568 ENSSFOG00015030537 ENSSFOG00015022611 ENSSFOG00015030251 SYT2 (ENSSFOG00015022645) ENSSFOG00015032618 ENSSFOG00015028965 SYT2 (ENSSFOG00015031201) ENSSFOG00015022684 ENSSFOG00015022653 ENSSFOG00015022740 MYBPH (ENSSFOG00015022754) NAV1 (ENSSFOG00015022785) csrp1a (ENSSFOG00015022832) phlda3 (ENSSFOG00015022839) Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 90 ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.l ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT00940000157392.p ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981 ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00940000165428.c.a ENSGT00940000158040.c ENSGT00940000156637.a ENSGT00940000156777.d ENSGT00440000039564.a.a ENSGT01030000234588.a.b ENSGT00730000112095 ENSGT00940000154709.a.b.a.b ENSGT00940000156735.d ENSGT01030000234555.a.a.b.a.b.a.d ENSGT00940000155067.b.b Euteleosteomorpha ANCESTRAL SPECIES 44 ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00940000157392.p ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000165920.a ENSGT00730000111641.a ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Acanthomorphata ANCESTRAL SPECIES 3 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Tiger tail seahorse MODERN SPECIES 404 map3k12 (ENSHCOG00000019859) pcbp2 (ENSHCOG00000019886) ENSHCOG00000019924 pfkfb2a (ENSHCOG00000019938) ENSHCOG00000019961 scube3 (ENSHCOG00000020006) ENSHCOG00000020015 ANKS1A (ENSHCOG00000020105) taf11 (ENSHCOG00000020114) BLTP3A (ENSHCOG00000020148) ilrun (ENSHCOG00000000713) SPDEF (ENSHCOG00000020452) pacsin1a (ENSHCOG00000020474) SMIM29 (ENSHCOG00000020479) hmga1a (ENSHCOG00000020487) GRM4 (ENSHCOG00000020506) ##22 ENSHCOG00000000816 snai1b (ENSHCOG00000020556) samhd1 (ENSHCOG00000020558) cfap20 (ENSHCOG00000001687) ENSHCOG00000001701 KBTBD12 (ENSHCOG00000001709) SLC26A6 (ENSHCOG00000001784) ENSHCOG00000001824 ENSHCOG00000001846 p4htma (ENSHCOG00000001858) ENSHCOG00000001885 parapinopsina (ENSHCOG00000001902) ddx20 (ENSHCOG00000001915) kcnd3 (ENSHCOG00000001923) ENSHCOG00000001935 Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Aplocheiloidei ANCESTRAL SPECIES ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00390000011238 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Mangrove rivulus MODERN SPECIES 13 aaas (ENSKMAG00000011524) map3k12 (ENSKMAG00000011456) pcbp2 (ENSKMAG00000011367) DLGAP4 (ENSKMAG00000011302) pfkfb2a (ENSKMAG00000011230) ENSKMAG00000011207 scube3 (ENSKMAG00000011109) ENSKMAG00000011073 ANKS1A (ENSKMAG00000010858) taf11 (ENSKMAG00000010780) BLTP3A (ENSKMAG00000010747) ilrun (ENSKMAG00000010704) pacsin1a (ENSKMAG00000010634) ENSKMAG00000010586 hmga1a (ENSKMAG00000010571) GRM4 (ENSKMAG00000010513) ##22 ENSKMAG00000010408 ENSKMAG00000010374 ENSKMAG00000010344 SYT2 (ENSKMAG00000010271) guca1b (ENSKMAG00000010238) oard1 (ENSKMAG00000010222) ppp4r2a (ENSKMAG00000010201) eif4e3 (ENSKMAG00000010167) ENSKMAG00000010077 ENSKMAG00000010050 mitfb (ENSKMAG00000010000) FRMD4B (ENSKMAG00000009928) arl6ip5b (ENSKMAG00000009896) LMOD3 (ENSKMAG00000009885) UBA3 (ENSKMAG00000009812) Turquoise killifish MODERN SPECIES 1624 WIBG (ENSNFUG00015022489) SPATS2 (ENSNFUG00015022490) PAN2 (ENSNFUG00015022494) ENSNFUG00015022502 ORMDL2 (ENSNFUG00015022504) TMEM194A (ENSNFUG00015022508) TAF11 (ENSNFUG00015022519) UHRF1BP1 (ENSNFUG00015022520) C6ORF106 (ENSNFUG00015022528) PACSIN1A (ENSNFUG00015004845) SMIM29 (ENSNFUG00015004918) ENSNFUG00015004926 ENSNFUG00015004940 ENSNFUG00015004944 ENSNFUG00015004951 GRM4 (ENSNFUG00015005026) ##22 ENSNFUG00015005195 ENSNFUG00015005200 ENSNFUG00015005213 Nfu_g_1_001532 (ENSNFUG00015005243) PPP1R12B (ENSNFUG00015005256) SYT2 (ENSNFUG00015005275) oard1 (ENSNFUG00015005290) Nfu_g_1_001572 (ENSNFUG00015005331) SNPHA (ENSNFUG00015005340) rad21l1 (ENSNFUG00015005349) Nfu_g_1_001530 (ENSNFUG00015005360) ENSNFUG00015005366 SAMD10A (ENSNFUG00015005376) UCKL1 (ENSNFUG00015005436) SI (ENSNFUG00015005570) Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b NAME_4 ANCESTRAL SPECIES 21 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Mummichog MODERN SPECIES 2226 aaas (ENSFHEG00000009696) map3k12 (ENSFHEG00000009675) pcbp2 (ENSFHEG00000009608) DLGAP4 (ENSFHEG00000009546) PFKFB2 (ENSFHEG00000009537) ENSFHEG00000009494 scube3 (ENSFHEG00000009478) ENSFHEG00000009324 ANKS1A (ENSFHEG00000009266) taf11 (ENSFHEG00000008968) BLTP3A (ENSFHEG00000008944) ilrun (ENSFHEG00000008788) pacsin1a (ENSFHEG00000008762) SMIM29 (ENSFHEG00000008742) hmga1a (ENSFHEG00000008729) GRM4 (ENSFHEG00000008715) ##22 ENSFHEG00000008681 ENSFHEG00000008603 ENSFHEG00000008583 SYT2 (ENSFHEG00000008553) oard1 (ENSFHEG00000008533) guca1b (ENSFHEG00000008497) ENSFHEG00000008293 eif4e3 (ENSFHEG00000008279) spc25 (ENSFHEG00000008240) ENSFHEG00000008230 mitfb (ENSFHEG00000008148) LMOD3 (ENSFHEG00000006588) arl6ip5b (ENSFHEG00000006570) UBA3 (ENSFHEG00000006559) TAFA3 (ENSFHEG00000006494) Sheepshead minnow MODERN SPECIES 199 ANKS1A (ENSCVAG00000022892) taf11 (ENSCVAG00000022925) BLTP3A (ENSCVAG00000022934) ilrun (ENSCVAG00000022951) pacsin1a (ENSCVAG00000022993) SMIM29 (ENSCVAG00000023002) hmga1a (ENSCVAG00000023019) GRM4 (ENSCVAG00000023051) ##22 ENSCVAG00000023090 ENSCVAG00000023109 ENSCVAG00000023156 SYT2 (ENSCVAG00000023162) oard1 (ENSCVAG00000023174) guca1b (ENSCVAG00000023180) ENSCVAG00000023190 eif4e3 (ENSCVAG00000023205) ENSCVAG00000023261 mitfb (ENSCVAG00000003807) FRMD4B (ENSCVAG00000003936) LMOD3 (ENSCVAG00000003950) arl6ip5b (ENSCVAG00000003957) UBA3 (ENSCVAG00000003999) TAFA3 (ENSCVAG00000004011) Poeciliinae ANCESTRAL SPECIES 2 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988.z ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00390000011238 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Poecilia ANCESTRAL SPECIES 14 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988.z ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00390000011238 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l NAME_6 ANCESTRAL SPECIES 23 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988.z ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00390000011238 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Amazon molly MODERN SPECIES 370 aaas (ENSPFOG00000010272) map3k12 (ENSPFOG00000010164) pcbp2 (ENSPFOG00000010086) DLGAP4 (ENSPFOG00000010011) pfkfb2a (ENSPFOG00000009728) ENSPFOG00000024032 scube3 (ENSPFOG00000009325) ENSPFOG00000009291 ANKS1A (ENSPFOG00000009029) taf11 (ENSPFOG00000008998) BLTP3A (ENSPFOG00000008598) ilrun (ENSPFOG00000008533) pacsin1a (ENSPFOG00000008472) SMIM29 (ENSPFOG00000008463) hmga1a (ENSPFOG00000008457) GRM4 (ENSPFOG00000008171) ##22 ENSPFOG00000007918 ENSPFOG00000007912 ENSPFOG00000007908 SYT2 (ENSPFOG00000007780) oard1 (ENSPFOG00000007773) guca1b (ENSPFOG00000007725) ENSPFOG00000007627 eif4e3 (ENSPFOG00000007551) ENSPFOG00000007428 ENSPFOG00000007399 mitfb (ENSPFOG00000007171) FRMD4B (ENSPFOG00000006714) LMOD3 (ENSPFOG00000006617) arl6ip5b (ENSPFOG00000006581) UBA3 (ENSPFOG00000006475) Sailfin molly MODERN SPECIES 70 GRM4 (ENSPLAG00000008102) ##22 ENSPLAG00000008453 ENSPLAG00000008487 ENSPLAG00000008507 SYT2 (ENSPLAG00000008579) oard1 (ENSPLAG00000008591) guca1b (ENSPLAG00000008683) ENSPLAG00000008703 eif4e3 (ENSPLAG00000008729) ENSPLAG00000008769 ENSPLAG00000008783 mitfb (ENSPLAG00000008823) FRMD4B (ENSPLAG00000000188) LMOD3 (ENSPLAG00000009187) arl6ip5b (ENSPLAG00000009197) UBA3 (ENSPLAG00000009264) Guppy MODERN SPECIES 459 aaas (ENSPREG00000006284) map3k12 (ENSPREG00000006228) pcbp2 (ENSPREG00000006202) DLGAP4 (ENSPREG00000006184) DLGAP4 (ENSPREG00000006175) PFKFB2 (ENSPREG00000006145) ENSPREG00000006107 scube3 (ENSPREG00000005568) ENSPREG00000005475 ANKS1A (ENSPREG00000005426) taf11 (ENSPREG00000005401) BLTP3A (ENSPREG00000005378) ilrun (ENSPREG00000005364) ENSPREG00000005354 hmga1a (ENSPREG00000005345) GRM4 (ENSPREG00000005310) ##22 ENSPREG00000005065 ENSPREG00000005014 ENSPREG00000004981 SYT2 (ENSPREG00000004950) oard1 (ENSPREG00000004913) guca1b (ENSPREG00000004858) ENSPREG00000004833 ENSPREG00000004819 eif4e3 (ENSPREG00000004801) ENSPREG00000004768 ENSPREG00000004758 mitfb (ENSPREG00000004738) FRMD4B (ENSPREG00000004698) LMOD3 (ENSPREG00000004671) arl6ip5b (ENSPREG00000004665) Platyfish MODERN SPECIES aaas (ENSXMAG00000016820) map3k12 (ENSXMAG00000016777) pcbp2 (ENSXMAG00000021752) DLGAP4 (ENSXMAG00000016762) PFKFB2 (ENSXMAG00000016736) ENSXMAG00000022642 scube3 (ENSXMAG00000016699) ENSXMAG00000022061 ANKS1A (ENSXMAG00000016654) taf11 (ENSXMAG00000016646) BLTP3A (ENSXMAG00000016608) ilrun (ENSXMAG00000022264) pacsin1a (ENSXMAG00000016576) SMIM29 (ENSXMAG00000016573) hmga1a (ENSXMAG00000016571) GRM4 (ENSXMAG00000016544) ##22 ENSXMAG00000016529 ENSXMAG00000016527 ENSXMAG00000016524 SYT2 (ENSXMAG00000016509) ENSXMAG00000016506 guca1b (ENSXMAG00000022127) ENSXMAG00000009582 eif4e3 (ENSXMAG00000024672) ENSXMAG00000016493 ENSXMAG00000016489 mitfb (ENSXMAG00000016472) FRMD4B (ENSXMAG00000016435) lmod3 (ENSXMAG00000016434) #30 arl6ip5b (ENSXMAG00000016428) UBA3 (ENSXMAG00000016399) Oryzias ANCESTRAL SPECIES 4 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Oryzias_b ANCESTRAL SPECIES 2 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Indian medaka MODERN SPECIES 23 map3k12 (ENSOMEG00000005820) pcbp2 (ENSOMEG00000005759) DLGAP4 (ENSOMEG00000005720) ENSOMEG00000005701 PFKFB2 (ENSOMEG00000005685) ENSOMEG00000005618 scube3 (ENSOMEG00000005579) ENSOMEG00000005444 ANKS1A (ENSOMEG00000005364) taf11 (ENSOMEG00000005158) BLTP3A (ENSOMEG00000005127) ilrun (ENSOMEG00000005106) pacsin1a (ENSOMEG00000005086) SMIM29 (ENSOMEG00000005067) hmga1a (ENSOMEG00000005055) GRM4 (ENSOMEG00000005033) ##22 ENSOMEG00000004950 ENSOMEG00000004839 ENSOMEG00000004820 SYT2 (ENSOMEG00000004746) oard1 (ENSOMEG00000004709) guca1b (ENSOMEG00000004691) ENSOMEG00000004679 eif4e3 (ENSOMEG00000004650) ENSOMEG00000004624 mitfb (ENSOMEG00000004573) FRMD4B (ENSOMEG00000004533) LMOD3 (ENSOMEG00000004488) arl6ip5b (ENSOMEG00000004482) UBA3 (ENSOMEG00000004466) ENSOMEG00000004448 Javanese ricefish MODERN SPECIES 21 map3k12 (ENSOJAG00000023237) pcbp2 (ENSOJAG00000023362) DLGAP4 (ENSOJAG00000023366) pfkfb2a (ENSOJAG00000023547) ENSOJAG00000023816 scube3 (ENSOJAG00000023855) ENSOJAG00000023909 ENSOJAG00000023910 ANKS1A (ENSOJAG00000023912) taf11 (ENSOJAG00000023920) BLTP3A (ENSOJAG00000023922) ilrun (ENSOJAG00000023925) pacsin1a (ENSOJAG00000023927) SMIM29 (ENSOJAG00000023933) hmga1a (ENSOJAG00000023934) GRM4 (ENSOJAG00000005734) ##22 ENSOJAG00000006093 ENSOJAG00000006258 ENSOJAG00000006263 SYT2 (ENSOJAG00000006280) oard1 (ENSOJAG00000006290) guca1b (ENSOJAG00000006296) ENSOJAG00000006313 eif4e3 (ENSOJAG00000006325) ENSOJAG00000006566 mitfb (ENSOJAG00000006597) FRMD4B (ENSOJAG00000006745) LMOD3 (ENSOJAG00000007078) arl6ip5b (ENSOJAG00000007573) UBA3 (ENSOJAG00000007608) ENSOJAG00000007898 Oryzias_a ANCESTRAL SPECIES ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT01090000260066.a.a.d.a.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Japanese Medaka HdrR MODERN SPECIES 21 map3k12 (ENSORLG00000012844) pcbp2 (ENSORLG00000012872) ENSORLG00000012896 pfkfb2a (ENSORLG00000012972) ENSORLG00000012982 scube3 (ENSORLG00000013086) ENSORLG00000013093 ANKS1A (ENSORLG00000013119) taf11 (ENSORLG00000013132) BLTP3A (ENSORLG00000013171) ENSORLG00000023178 ILRUN (ENSORLG00000013188) pacsin1a (ENSORLG00000013207) SMIM29 (ENSORLG00000022781) ENSORLG00000026301 ENSORLG00000013266 ##22 ENSORLG00000025216 ENSORLG00000013280 ENSORLG00000013284 ENSORLG00000013293 SYT2 (ENSORLG00000013338) oard1 (ENSORLG00000013349) guca1b (ENSORLG00000013359) ENSORLG00000025571 EIF4E3 (ENSORLG00000013391) ENSORLG00000013419 mitfb (ENSORLG00000013461) FRMD4B (ENSORLG00000013479) LMOD3 (ENSORLG00000013486) arl6ip5b (ENSORLG00000013502) UBA3 (ENSORLG00000013554) Chinese medaka MODERN SPECIES 38 aaas (ENSOSIG00000023097) map3k12 (ENSOSIG00000023118) pcbp2 (ENSOSIG00000023126) DLGAP4 (ENSOSIG00000023129) pfkfb2a (ENSOSIG00000023250) ENSOSIG00000023558 scube3 (ENSOSIG00000023565) ENSOSIG00000023570 ANKS1A (ENSOSIG00000023579) taf11 (ENSOSIG00000023585) BLTP3A (ENSOSIG00000023588) ENSOSIG00000023589 pacsin1a (ENSOSIG00000023593) SMIM29 (ENSOSIG00000023597) ENSOSIG00000023598 GRM4 (ENSOSIG00000023620) ##22 ENSOSIG00000023658 ENSOSIG00000023660 ENSOSIG00000023662 ENSOSIG00000023663 SYT2 (ENSOSIG00000023665) oard1 (ENSOSIG00000023667) guca1b (ENSOSIG00000023670) ENSOSIG00000023671 eif4e3 (ENSOSIG00000023673) ENSOSIG00000023675 mitfb (ENSOSIG00000023681) FRMD4B (ENSOSIG00000023683) LMOD3 (ENSOSIG00000023685) arl6ip5b (ENSOSIG00000023686) UBA3 (ENSOSIG00000023700) Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b.f ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Pomacentridae_A ANCESTRAL SPECIES 24 ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b.f ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Amphiprion ANCESTRAL SPECIES 15 ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b.f ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988.cb ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Clown anemonefish MODERN SPECIES 1283 ENSAOCG00000023617 scube3 (ENSAOCG00000023577) C1orf116 (ENSAOCG00000023494) ANKS1A (ENSAOCG00000023461) taf11 (ENSAOCG00000023354) BLTP3A (ENSAOCG00000023342) ilrun (ENSAOCG00000023296) SPDEF (ENSAOCG00000023268) pacsin1a (ENSAOCG00000023170) ENSAOCG00000002496 hmga1a (ENSAOCG00000023138) GRM4 (ENSAOCG00000023110) ##22 ENSAOCG00000023054 ENSAOCG00000001658 ENSAOCG00000022927 SYT2 (ENSAOCG00000022906) oard1 (ENSAOCG00000022871) guca1b (ENSAOCG00000002085) ppp4r2a (ENSAOCG00000022804) eif4e3 (ENSAOCG00000022785) ENSAOCG00000022757 MITF (ENSAOCG00000022699) FRMD4B (ENSAOCG00000022672) LMOD3 (ENSAOCG00000022546) arl6ip5b (ENSAOCG00000001639) UBA3 (ENSAOCG00000002690) ENSAOCG00000022434 Orange clownfish MODERN SPECIES 22 DLGAP4 (ENSAPEG00000017580) ENSAPEG00000017647 pfkfb2a (ENSAPEG00000017662) ENSAPEG00000017735 ENSAPEG00000017753 scube3 (ENSAPEG00000017769) C1orf116 (ENSAPEG00000017825) ANKS1A (ENSAPEG00000017865) taf11 (ENSAPEG00000017987) BLTP3A (ENSAPEG00000018013) ilrun (ENSAPEG00000018121) SPDEF (ENSAPEG00000018147) pacsin1a (ENSAPEG00000018156) ENSAPEG00000018187 hmga1a (ENSAPEG00000018199) GRM4 (ENSAPEG00000018246) ##22 ENSAPEG00000018303 ENSAPEG00000018479 ENSAPEG00000018492 SYT2 (ENSAPEG00000018508) oard1 (ENSAPEG00000018533) guca1b (ENSAPEG00000018546) ENSAPEG00000018551 eif4e3 (ENSAPEG00000018566) ENSAPEG00000018598 mitfb (ENSAPEG00000018693) FRMD4B (ENSAPEG00000018736) LMOD3 (ENSAPEG00000018905) arl6ip5b (ENSAPEG00000018918) UBA3 (ENSAPEG00000018946) ENSAPEG00000019018 Spiny chromis MODERN SPECIES 494 taf11 (ENSAPOG00000014989) BLTP3A (ENSAPOG00000015000) ilrun (ENSAPOG00000015034) SPDEF (ENSAPOG00000015237) pacsin1a (ENSAPOG00000000426) ENSAPOG00000015268 hmga1a (ENSAPOG00000015286) GRM4 (ENSAPOG00000015361) ##22 Bicolor damselfish MODERN SPECIES 240 ENSSPAG00000000137 GRM4 (ENSSPAG00000000106) ##22 ENSSPAG00000019670 ENSSPAG00000019628 ENSSPAG00000019616 SYT2 (ENSSPAG00000019493) oard1 (ENSSPAG00000019457) guca1b (ENSSPAG00000019383) ppp4r2a (ENSSPAG00000019361) eif4e3 (ENSSPAG00000019336) ENSSPAG00000019266 MITF (ENSSPAG00000019214) FRMD4B (ENSSPAG00000019183) LMOD3 (ENSSPAG00000019172) arl6ip5b (ENSSPAG00000019164) UBA3 (ENSSPAG00000019100) ENSSPAG00000019078 Cichlidae ANCESTRAL SPECIES ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000155224.c.b ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Zebra mbuna MODERN SPECIES 1103 map3k12 (ENSMZEG00005026185) pcbp2 (ENSMZEG00005026186) ENSMZEG00005026190 ENSMZEG00005026192 PFKFB2 (ENSMZEG00005026194) ENSMZEG00005026196 scube3 (ENSMZEG00005026197) ENSMZEG00005026201 ANKS1A (ENSMZEG00005026203) taf11 (ENSMZEG00005026214) BLTP3A (ENSMZEG00005026216) ilrun (ENSMZEG00005026220) pacsin1a (ENSMZEG00005026221) SMIM29 (ENSMZEG00005026222) ENSMZEG00005026223 GRM4 (ENSMZEG00005026226) ##22 ENSMZEG00005026230 ENSMZEG00005026244 ENSMZEG00005026245 SYT2 (ENSMZEG00005026246) oard1 (ENSMZEG00005026247) guca1b (ENSMZEG00005026249) ENSMZEG00005026250 eif4e3 (ENSMZEG00005026251) ENSMZEG00005026252 mitfb (ENSMZEG00005026253) FRMD4B (ENSMZEG00005026256) LMOD3 (ENSMZEG00005026257) arl6ip5b (ENSMZEG00005026258) UBA3 (ENSMZEG00005026259) ENSMZEG00005026260 P. nyererei MODERN SPECIES 339 map3k12 (ENSPNYG00000018837) pcbp2 (ENSPNYG00000018792) ENSPNYG00000018763 ENSPNYG00000018720 PFKFB2 (ENSPNYG00000018657) ENSPNYG00000018602 scube3 (ENSPNYG00000018503) ENSPNYG00000018474 ANKS1A (ENSPNYG00000018443) taf11 (ENSPNYG00000018423) BLTP3A (ENSPNYG00000018412) ilrun (ENSPNYG00000018391) pacsin1a (ENSPNYG00000018149) SMIM29 (ENSPNYG00000018092) hmga1a (ENSPNYG00000018055) GRM4 (ENSPNYG00000018018) ##22 ENSPNYG00000017905 ENSPNYG00000017892 ENSPNYG00000017879 SYT2 (ENSPNYG00000017859) guca1b (ENSPNYG00000017770) oard1 (ENSPNYG00000017743) ENSPNYG00000017730 eif4e3 (ENSPNYG00000017704) ENSPNYG00000017690 mitfb (ENSPNYG00000017638) FRMD4B (ENSPNYG00000017559) lmod3 (ENSPNYG00000017518) #30 arl6ip5b (ENSPNYG00000017500) UBA3 (ENSPNYG00000017442) TAFA3 (ENSPNYG00000017420) Burton s mouthbrooder MODERN SPECIES 346 map3k12 (ENSHBUG00000008855) pcbp2 (ENSHBUG00000008769) DLGAP4 (ENSHBUG00000008711) ENSHBUG00000008692 PFKFB2 (ENSHBUG00000008677) ENSHBUG00000008603 scube3 (ENSHBUG00000008582) ENSHBUG00000008402 ANKS1A (ENSHBUG00000008381) taf11 (ENSHBUG00000008209) BLTP3A (ENSHBUG00000008196) ilrun (ENSHBUG00000008175) pacsin1a (ENSHBUG00000008147) SMIM29 (ENSHBUG00000008097) ENSHBUG00000008088 GRM4 (ENSHBUG00000008056) ##22 ENSHBUG00000008020 ENSHBUG00000007975 ENSHBUG00000007957 SYT2 (ENSHBUG00000007924) oard1 (ENSHBUG00000007914) guca1b (ENSHBUG00000007882) ENSHBUG00000001185 eif4e3 (ENSHBUG00000007849) ENSHBUG00000007818 mitfb (ENSHBUG00000007780) FRMD4B (ENSHBUG00000007720) LMOD3 (ENSHBUG00000007688) arl6ip5b (ENSHBUG00000007634) UBA3 (ENSHBUG00000007609) TAFA3 (ENSHBUG00000007504) Lyretail cichlid MODERN SPECIES 321 pfkfb2a (ENSNBRG00000012892) ENSNBRG00000012863 scube3 (ENSNBRG00000012815) ENSNBRG00000012804 ENSNBRG00000012757 ENSNBRG00000012744 ENSNBRG00000012735 taf11 (ENSNBRG00000012729) BLTP3A (ENSNBRG00000012691) ilrun (ENSNBRG00000012669) pacsin1a (ENSNBRG00000012655) SMIM29 (ENSNBRG00000012639) hmga1a (ENSNBRG00000012619) GRM4 (ENSNBRG00000012602) ##22 ENSNBRG00000012393 ENSNBRG00000012364 ENSNBRG00000012353 SYT2 (ENSNBRG00000012295) guca1b (ENSNBRG00000012287) oard1 (ENSNBRG00000012273) ENSNBRG00000012260 eif4e3 (ENSNBRG00000012239) ENSNBRG00000012176 mitfb (ENSNBRG00000012137) FRMD4B (ENSNBRG00000011966) arl6ip5b (ENSNBRG00000011929) UBA3 (ENSNBRG00000011885) TAFA3 (ENSNBRG00000011866) ENSNBRG00000011857 Nile tilapia MODERN SPECIES 12 map3k12 (ENSONIG00000017012) pcbp2 (ENSONIG00000017003) ENSONIG00000030798 ENSONIG00000017000 PFKFB2 (ENSONIG00000016995) ENSONIG00000027632 scube3 (ENSONIG00000016993) ENSONIG00000016992 ANKS1A (ENSONIG00000016990) taf11 (ENSONIG00000016989) BLTP3A (ENSONIG00000016984) ilrun (ENSONIG00000016983) pacsin1a (ENSONIG00000016981) ENSONIG00000029046 hmga1a (ENSONIG00000016976) GRM4 (ENSONIG00000016968) ##22 ENSONIG00000016965 ENSONIG00000016963 ENSONIG00000031575 oard1 (ENSONIG00000039334) guca1b (ENSONIG00000016961) ENSONIG00000016960 eif4e3 (ENSONIG00000016959) ENSONIG00000016955 SYT2 (ENSONIG00000016962) mitfb (ENSONIG00000016952) FRMD4B (ENSONIG00000016949) LMOD3 (ENSONIG00000041416) arl6ip5b (ENSONIG00000016945) UBA3 (ENSONIG00000016941) TAFA3 (ENSONIG00000030060) Midas cichlid MODERN SPECIES ENSACIG00000000036 ENSACIG00000000037 ENSACIG00000000038 PFKFB2 (ENSACIG00000000039) ENSACIG00000000040 ENSACIG00000000041 scube3 (ENSACIG00000000042) ENSACIG00000000043 ANKS1A (ENSACIG00000000044) taf11 (ENSACIG00000000045) BLTP3A (ENSACIG00000000046) ilrun (ENSACIG00000000047) pacsin1a (ENSACIG00000000048) ENSACIG00000000049 ENSACIG00000000050 GRM4 (ENSACIG00000000051) ##22 ENSACIG00000000052 ENSACIG00000000053 ENSACIG00000000054 SYT2 (ENSACIG00000000055) oard1 (ENSACIG00000000056) guca1b (ENSACIG00000000057) PPP4R2 (ENSACIG00000000058) eif4e3 (ENSACIG00000000059) ENSACIG00000000060 mitfb (ENSACIG00000000061) LMOD3 (ENSACIG00000000062) arl6ip5b (ENSACIG00000000063) UBA3 (ENSACIG00000000064) ENSACIG00000000065 ENSACIG00000000066 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Carangaria ANCESTRAL SPECIES 2 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Seriola ANCESTRAL SPECIES 8 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Greater amberjack MODERN SPECIES 228 ENSSDUG00000019249 scube3 (ENSSDUG00000019266) ENSSDUG00000019314 ANKS1A (ENSSDUG00000019353) taf11 (ENSSDUG00000019473) BLTP3A (ENSSDUG00000019488) ilrun (ENSSDUG00000019512) SPDEF (ENSSDUG00000019525) pacsin1a (ENSSDUG00000019543) SMIM29 (ENSSDUG00000019574) hmga1a (ENSSDUG00000019583) GRM4 (ENSSDUG00000019602) ##22 ENSSDUG00000019643 ENSSDUG00000020073 ENSSDUG00000020108 ENSSDUG00000020135 ENSSDUG00000020145 ENSSDUG00000020170 ENSSDUG00000020179 SYT2 (ENSSDUG00000020202) ENSSDUG00000020215 oard1 (ENSSDUG00000020232) guca1b (ENSSDUG00000020255) ENSSDUG00000020303 eif4e3 (ENSSDUG00000020316) ENSSDUG00000020344 MITF (ENSSDUG00000020369) Yellowtail amberjack MODERN SPECIES 2725 pcbp2 (ENSSLDG00000008839) DLGAP4 (ENSSLDG00000008798) PFKFB2 (ENSSLDG00000008710) ENSSLDG00000008665 scube3 (ENSSLDG00000008542) ENSSLDG00000008472 ANKS1A (ENSSLDG00000008265) taf11 (ENSSLDG00000008190) BLTP3A (ENSSLDG00000008151) ilrun (ENSSLDG00000008116) SPDEF (ENSSLDG00000008101) pacsin1a (ENSSLDG00000008056) ENSSLDG00000008031 SMIM29 (ENSSLDG00000008016) hmga1a (ENSSLDG00000007999) GRM4 (ENSSLDG00000007949) ##22 ENSSLDG00000007924 ENSSLDG00000007911 ENSSLDG00000007886 ENSSLDG00000007868 oard1 (ENSSLDG00000007846) guca1b (ENSSLDG00000007830) ENSSLDG00000007800 eif4e3 (ENSSLDG00000007755) ENSSLDG00000007698 mitfb (ENSSLDG00000007666) FRMD4B (ENSSLDG00000007437) LMOD3 (ENSSLDG00000007374) arl6ip5b (ENSSLDG00000007348) UBA3 (ENSSLDG00000007295) ENSSLDG00000007275 Barramundi perch MODERN SPECIES 53 ENSLCAG00010010593 scube3 (ENSLCAG00010010627) ENSLCAG00010010765 ANKS1A (ENSLCAG00010010775) taf11 (ENSLCAG00010010799) BLTP3A (ENSLCAG00010010801) ilrun (ENSLCAG00010010808) SPDEF (ENSLCAG00010010811) pacsin1a (ENSLCAG00010010814) SMIM29 (ENSLCAG00010010818) ENSLCAG00010010822 GRM4 (ENSLCAG00010010829) ##22 ENSLCAG00010010848 ENSLCAG00010010857 ENSLCAG00010010863 SYT2 (ENSLCAG00010010866) oard1 (ENSLCAG00010010869) guca1b (ENSLCAG00010010874) ppp4r2a (ENSLCAG00010010880) eif4e3 (ENSLCAG00010010884) ENSLCAG00010010882 mitfb (ENSLCAG00010010894) FRMD4B (ENSLCAG00010010999) ENSLCAG00010011054 LMOD3 (ENSLCAG00010011056) arl6ip5b (ENSLCAG00010011060) UBA3 (ENSLCAG00010011079) Pleuronectoidei ANCESTRAL SPECIES 24 ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Turbot MODERN SPECIES 2 ENSSMAG00000005155 pcbp2 (ENSSMAG00000005182) ENSSMAG00000033675 PACSIN1 (ENSSMAG00000005246) SPDEF (ENSSMAG00000005268) ILRUN (ENSSMAG00000030395) BLTP3A (ENSSMAG00000005317) TAF11 (ENSSMAG00000005281) ANKS1A (ENSSMAG00000005327) ENSSMAG00000005398 SCUBE3 (ENSSMAG00000005434) ENSSMAG00000005530 ENSSMAG00000005545 ENSSMAG00000029604 ENSSMAG00000026827 ENSSMAG00000005616 ##22 ENSSMAG00000005664 ENSSMAG00000005929 ENSSMAG00000005944 ENSSMAG00000005957 ENSSMAG00000005987 ENSSMAG00000006006 ENSSMAG00000006095 EIF4E3 (ENSSMAG00000006106) ENSSMAG00000006151 ENSSMAG00000027760 ENSSMAG00000026540 MITF (ENSSMAG00000006262) FRMD4B (ENSSMAG00000006293) LMOD3 (ENSSMAG00000006385) ARL6IP5 (ENSSMAG00000006402) Tongue sole MODERN SPECIES 1 NOL9 (ENSCSEG00000017536) PLEKHG5 (ENSCSEG00000017546) ENSCSEG00000017598 irx7 (ENSCSEG00000017607) ENSCSEG00000017618 scube3 (ENSCSEG00000017662) ENSCSEG00000017696 ANKS1A (ENSCSEG00000017717) taf11 (ENSCSEG00000017802) ENSCSEG00000017811 ilrun (ENSCSEG00000017831) SPDEF (ENSCSEG00000017844) pacsin1a (ENSCSEG00000017855) SMIM29 (ENSCSEG00000017870) hmga1a (ENSCSEG00000017875) ENSCSEG00000017881 ##22 ENSCSEG00000017902 ENSCSEG00000018403 SYT2 (ENSCSEG00000018415) ENSCSEG00000018435 guca1b (ENSCSEG00000018453) eif4e3 (ENSCSEG00000018457) ENSCSEG00000018463 mitfb (ENSCSEG00000018476) FRMD4B (ENSCSEG00000018511) arl6ip5b (ENSCSEG00000018585) LMOD3 (ENSCSEG00000018592) UBA3 (ENSCSEG00000018598) TAFA3 (ENSCSEG00000018619) ENSCSEG00000018627 slc16a7 (ENSCSEG00000018632) Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Zig-zag eel MODERN SPECIES 21 pcbp2 (ENSMAMG00000024156) ENSMAMG00000024157 ENSMAMG00000027810 ENSMAMG00000024159 ENSMAMG00000024160 SCUBE3 (ENSMAMG00000024161) ENSMAMG00000028001 ANKS1A (ENSMAMG00000024163) TAF11 (ENSMAMG00000027828) BLTP3A (ENSMAMG00000024165) ILRUN (ENSMAMG00000024166) SPDEF (ENSMAMG00000024167) PACSIN1 (ENSMAMG00000024168) ENSMAMG00000024733 ENSMAMG00000024170 ENSMAMG00000024171 ##22 ENSMAMG00000024172 ENSMAMG00000028098 ENSMAMG00000024174 ENSMAMG00000024175 ENSMAMG00000024176 ENSMAMG00000024177 ENSMAMG00000024178 ENSMAMG00000024179 EIF4E3 (ENSMAMG00000024995) ENSMAMG00000024181 ENSMAMG00000026584 MITF (ENSMAMG00000024182) FRMD4B (ENSMAMG00000024183) LMOD3 (ENSMAMG00000024184) ARL6IP5 (ENSMAMG00000027048) Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Climbing perch MODERN SPECIES 20 pcbp2 (ENSATEG00000019272) ENSATEG00000028543 ENSATEG00000019363 ENSATEG00000026104 SCUBE3 (ENSATEG00000019449) ENSATEG00000019537 ANKS1A (ENSATEG00000019572) ENSATEG00000019715 TAF11 (ENSATEG00000019727) BLTP3A (ENSATEG00000019758) ILRUN (ENSATEG00000019774) SPDEF (ENSATEG00000019791) pacsin1a (ENSATEG00000019801) ENSATEG00000027835 hmga1a (ENSATEG00000029103) ENSATEG00000019879 ##22 ENSATEG00000019912 ENSATEG00000020017 ENSATEG00000020037 ENSATEG00000020079 ENSATEG00000020099 ENSATEG00000026466 ENSATEG00000020209 EIF4E3 (ENSATEG00000028400) ENSATEG00000020274 MITF (ENSATEG00000025665) FRMD4B (ENSATEG00000020382) LMOD3 (ENSATEG00000028174) ARL6IP5 (ENSATEG00000020415) UBA3 (ENSATEG00000020450) ENSATEG00000020516 Siamese fighting fish MODERN SPECIES 18 ENSBSLG00000009461 FAM120C (ENSBSLG00000009766) hsd17b10 (ENSBSLG00000010206) ENSBSLG00000010215 ENSBSLG00000010501 scube3 (ENSBSLG00000010867) ENSBSLG00000012415 ANKS1A (ENSBSLG00000013397) taf11 (ENSBSLG00000014455) BLTP3A (ENSBSLG00000014475) ilrun (ENSBSLG00000014922) SPDEF (ENSBSLG00000014928) pacsin1a (ENSBSLG00000014934) ENSBSLG00000015150 hmga1a (ENSBSLG00000015172) ENSBSLG00000015263 ##22 ENSBSLG00000015723 ENSBSLG00000015743 SYT2 (ENSBSLG00000015762) ENSBSLG00000015769 ENSBSLG00000015774 ENSBSLG00000015777 ENSBSLG00000015782 Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT01000000217669 ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Tetraodon DUPLICATION Tetraodon MODERN SPECIES 24 col2a1a (ENSTNIG00000012588) aaas (ENSTNIG00000012587) map3k12 (ENSTNIG00000012586) pcbp2 (ENSTNIG00000012585) DLGAP4 (ENSTNIG00000012584) pfkfb2a (ENSTNIG00000012583) ENSTNIG00000012582 scube3 (ENSTNIG00000012581) ANKS1A (ENSTNIG00000012580) taf11 (ENSTNIG00000012579) BLTP3A (ENSTNIG00000012578) ilrun (ENSTNIG00000012577) SPDEF (ENSTNIG00000001703) pacsin1a (ENSTNIG00000012576) ENSTNIG00000012574 ##22 GRM4 (ENSTNIG00000012573) ##22 ENSTNIG00000012572 ENSTNIG00000012571 ENSTNIG00000012570 SYT2 (ENSTNIG00000012569) oard1 (ENSTNIG00000012568) guca1b (ENSTNIG00000012567) eif4e3 (ENSTNIG00000012566) ENSTNIG00000012565 mitfb (ENSTNIG00000012564) FRMD4B (ENSTNIG00000012563) LMOD3 (ENSTNIG00000012562) arl6ip5b (ENSTNIG00000012561) UBA3 (ENSTNIG00000012560) ENSTNIG00000012559 ENSTNIG00000012558 Tetraodon MODERN SPECIES 24 GLS2 (ENSTNIG00000012589) col2a1a (ENSTNIG00000012588) aaas (ENSTNIG00000012587) map3k12 (ENSTNIG00000012586) pcbp2 (ENSTNIG00000012585) DLGAP4 (ENSTNIG00000012584) pfkfb2a (ENSTNIG00000012583) ENSTNIG00000012582 scube3 (ENSTNIG00000012581) ANKS1A (ENSTNIG00000012580) taf11 (ENSTNIG00000012579) BLTP3A (ENSTNIG00000012578) ilrun (ENSTNIG00000012577) SPDEF (ENSTNIG00000001703) pacsin1a (ENSTNIG00000012576) ENSTNIG00000012574 ##22 GRM4 (ENSTNIG00000012573) ##22 ENSTNIG00000012572 ENSTNIG00000012571 ENSTNIG00000012570 SYT2 (ENSTNIG00000012569) oard1 (ENSTNIG00000012568) guca1b (ENSTNIG00000012567) eif4e3 (ENSTNIG00000012566) ENSTNIG00000012565 mitfb (ENSTNIG00000012564) FRMD4B (ENSTNIG00000012563) LMOD3 (ENSTNIG00000012562) arl6ip5b (ENSTNIG00000012561) UBA3 (ENSTNIG00000012560) ENSTNIG00000012559 Fugu MODERN SPECIES 15 map3k12 (ENSTRUG00000009106) pcbp2 (ENSTRUG00000009361) ENSTRUG00000009651 pfkfb2a (ENSTRUG00000009968) ENSTRUG00000028258 scube3 (ENSTRUG00000010346) ENSTRUG00000031987 ANKS1A (ENSTRUG00000010524) taf11 (ENSTRUG00000021221) BLTP3A (ENSTRUG00000010893) ILRUN (ENSTRUG00000011005) SPDEF (ENSTRUG00000011048) pacsin1a (ENSTRUG00000011060) ENSTRUG00000030849 ENSTRUG00000021298 ENSTRUG00000011185 ##22 ENSTRUG00000027214 ENSTRUG00000020555 ENSTRUG00000028060 ENSTRUG00000026763 SYT2 (ENSTRUG00000011452) ENSTRUG00000011698 guca1b (ENSTRUG00000011703) ENSTRUG00000011777 eif4e3 (ENSTRUG00000029505) ENSTRUG00000011898 mitfb (ENSTRUG00000012080) FRMD4B (ENSTRUG00000031158) LMOD3 (ENSTRUG00000012256) arl6ip5b (ENSTRUG00000012296) UBA3 (ENSTRUG00000012359) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Ballan wrasse MODERN SPECIES 4 pcbp2 (ENSLBEG00000010080) DLGAP4 (ENSLBEG00000010025) ENSLBEG00000009987 pfkfb2a (ENSLBEG00000009916) ENSLBEG00000009848 scube3 (ENSLBEG00000009740) ENSLBEG00000009698 ANKS1A (ENSLBEG00000009637) taf11 (ENSLBEG00000009596) BLTP3A (ENSLBEG00000009223) ilrun (ENSLBEG00000009112) SPDEF (ENSLBEG00000009095) pacsin1a (ENSLBEG00000009020) SMIM29 (ENSLBEG00000008973) hmga1a (ENSLBEG00000008947) GRM4 (ENSLBEG00000008769) ##22 ENSLBEG00000008629 ENSLBEG00000008572 ENSLBEG00000008516 SYT2 (ENSLBEG00000008433) oard1 (ENSLBEG00000008410) guca1b (ENSLBEG00000008316) ENSLBEG00000008284 eif4e3 (ENSLBEG00000008251) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Perciformes ANCESTRAL SPECIES 4 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Cottioidei ANCESTRAL SPECIES 2 ENSGT00390000009446 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Lumpfish MODERN SPECIES 22 pcbp2 (ENSCLMG00005010728) DLGAP4 (ENSCLMG00005010727) ENSCLMG00005010726 PFKFB2 (ENSCLMG00005004090) ENSCLMG00005004047 scube3 (ENSCLMG00005003280) ENSCLMG00005003263 ANKS1A (ENSCLMG00005003104) taf11 (ENSCLMG00005003060) BLTP3A (ENSCLMG00005003054) ILRUN (ENSCLMG00005003045) SPDEF (ENSCLMG00005003041) pacsin1a (ENSCLMG00005003034) SMIM29 (ENSCLMG00005003029) ENSCLMG00005003026 GRM4 (ENSCLMG00005003011) ##22 ENSCLMG00005002982 ENSCLMG00005002965 ENSCLMG00005016315 SYT2 (ENSCLMG00005016314) oard1 (ENSCLMG00005016285) guca1b (ENSCLMG00005016282) ENSCLMG00005016281 eif4e3 (ENSCLMG00005016277) ENSCLMG00005016275 mitfb (ENSCLMG00005016206) FRMD4B (ENSCLMG00005016199) LMOD3 (ENSCLMG00005016194) arl6ip5b (ENSCLMG00005016192) UBA3 (ENSCLMG00005016140) ENSCLMG00005016130 Stickleback MODERN SPECIES 11 aaas (ENSGACG00000003128) map3k12 (ENSGACG00000003194) pcbp2 (ENSGACG00000003197) DLGAP4 (ENSGACG00000003221) pfkfb2a (ENSGACG00000003225) ENSGACG00000003245 scube3 (ENSGACG00000003249) ENSGACG00000003252 ANKS1A (ENSGACG00000003255) taf11 (ENSGACG00000003275) BLTP3A (ENSGACG00000003278) ilrun (ENSGACG00000003293) SPDEF (ENSGACG00000003298) pacsin1a (ENSGACG00000003301) SMIM29 (ENSGACG00000003322) GRM4 (ENSGACG00000003323) ##22 ENSGACG00000003339 ENSGACG00000003349 ENSGACG00000003351 ENSGACG00000003354 SYT2 (ENSGACG00000003359) oard1 (ENSGACG00000003364) guca1b (ENSGACG00000003369) ENSGACG00000003388 eif4e3 (ENSGACG00000003392) ENSGACG00000003402 MITF (ENSGACG00000003425) FRMD4B (ENSGACG00000003431) LMOD3 (ENSGACG00000003438) arl6ip5b (ENSGACG00000003444) UBA3 (ENSGACG00000003450) Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000178117 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Channel bull blenny MODERN SPECIES 21 map3k12 (ENSCGOG00000002031) pcbp2 (ENSCGOG00000001972) ENSCGOG00000001967 pfkfb2a (ENSCGOG00000001061) ENSCGOG00000001037 scube3 (ENSCGOG00000000833) ENSCGOG00000000747 ANKS1A (ENSCGOG00000000723) taf11 (ENSCGOG00000000721) BLTP3A (ENSCGOG00000000711) ilrun (ENSCGOG00000000707) SPDEF (ENSCGOG00000000705) pacsin1a (ENSCGOG00000000682) SMIM29 (ENSCGOG00000000672) ENSCGOG00000000668 GRM4 (ENSCGOG00000000653) ##22 ENSCGOG00000000639 ENSCGOG00000000634 ENSCGOG00000000630 SYT2 (ENSCGOG00000000622) oard1 (ENSCGOG00000000615) guca1b (ENSCGOG00000000606) ppp4r2a (ENSCGOG00000000601) eif4e3 (ENSCGOG00000000575) ENSCGOG00000000562 mitfb (ENSCGOG00000000480) FRMD4B (ENSCGOG00000023692) arl6ip5b (ENSCGOG00000023690) LMOD3 (ENSCGOG00000023691) UBA3 (ENSCGOG00000023478) ENSCGOG00000023459 Pike perch MODERN SPECIES 31 map3k12 (ENSSLUG00000022911) pcbp2 (ENSSLUG00000022994) DLGAP4 (ENSSLUG00000023132) PFKFB2 (ENSSLUG00000023258) ENSSLUG00000024519 scube3 (ENSSLUG00000024590) ENSSLUG00000024756 ANKS1A (ENSSLUG00000024759) taf11 (ENSSLUG00000024762) BLTP3A (ENSSLUG00000024763) ilrun (ENSSLUG00000024766) SPDEF (ENSSLUG00000024768) pacsin1a (ENSSLUG00000024771) SMIM29 (ENSSLUG00000024779) hmga1a (ENSSLUG00000024780) GRM4 (ENSSLUG00000024781) ##22 ENSSLUG00000024785 ENSSLUG00000024788 ENSSLUG00000024799 ENSSLUG00000024803 SYT2 (ENSSLUG00000024808) oard1 (ENSSLUG00000024810) guca1b (ENSSLUG00000024812) ENSSLUG00000024814 eif4e3 (ENSSLUG00000024819) ENSSLUG00000024823 ENSSLUG00000024830 mitfb (ENSSLUG00000024839) FRMD4B (ENSSLUG00000024860) LMOD3 (ENSSLUG00000024877) arl6ip5b (ENSSLUG00000024880) Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Gilthead seabream MODERN SPECIES 21 OGN2 (ENSSAUG00010021388) UQCC5 (ENSSAUG00010021391) pfkfb2a (ENSSAUG00010021414) ENSSAUG00010023246 ENSSAUG00010023247 scube3 (ENSSAUG00010023261) ENSSAUG00010023631 ANKS1A (ENSSAUG00010023655) taf11 (ENSSAUG00010023960) BLTP3A (ENSSAUG00010023962) ilrun (ENSSAUG00010023972) SPDEF (ENSSAUG00010023973) pacsin1a (ENSSAUG00010023975) ENSSAUG00010004092 ENSSAUG00010004159 GRM4 (ENSSAUG00010004196) ##22 ENSSAUG00010004241 ENSSAUG00010004252 ENSSAUG00010004255 SYT2 (ENSSAUG00010004264) oard1 (ENSSAUG00010004272) guca1b (ENSSAUG00010004275) ppp4r2a (ENSSAUG00010004280) eif4e3 (ENSSAUG00010004299) ENSSAUG00010004303 mitfb (ENSSAUG00010004313) FRMD4B (ENSSAUG00010004427) LMOD3 (ENSSAUG00010005019) arl6ip5b (ENSSAUG00010005020) UBA3 (ENSSAUG00010005022) TAFA3 (ENSSAUG00010006399) Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000159006.c.b ENSGT00940000154129.hd ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000167980 ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b.a.b Large yellow croaker MODERN SPECIES 487 MYT1 (ENSLCRG00005021923) porcnl (ENSLCRG00005021971) ENSLCRG00005022004 suv39h1b (ENSLCRG00005022024) gpr173 (ENSLCRG00005022028) ENSLCRG00005022051 trappc6b (ENSLCRG00005022080) ENSLCRG00005022098 ENSLCRG00005022103 ENSLCRG00005022141 ENSLCRG00005022185 SPDEF (ENSLCRG00005022189) pacsin1a (ENSLCRG00005022218) SMIM29 (ENSLCRG00005003415) ENSLCRG00005003421 GRM4 (ENSLCRG00005003603) ##22 ENSLCRG00005004592 ENSLCRG00005004608 ENSLCRG00005004624 SYT2 (ENSLCRG00005004649) oard1 (ENSLCRG00005004663) guca1b (ENSLCRG00005004667) ppp4r2a (ENSLCRG00005004700) eif4e3 (ENSLCRG00005004729) ENSLCRG00005004742 ENSLCRG00005004789 mitfb (ENSLCRG00005005088) FRMD4B (ENSLCRG00005006784) LMOD3 (ENSLCRG00005006849) arl6ip5b (ENSLCRG00005006858) UBA3 (ENSLCRG00005006934) European seabass MODERN SPECIES 14 ENSDLAG00005029050 pcbp2 (ENSDLAG00005022214) ENSDLAG00005022197 ENSDLAG00005020550 ENSDLAG00005020455 SCUBE3 (ENSDLAG00005018821) ENSDLAG00005018775 ANKS1A (ENSDLAG00005017188) TAF11 (ENSDLAG00005027404) BLTP3A (ENSDLAG00005016949) ILRUN (ENSDLAG00005026599) SPDEF (ENSDLAG00005016913) pacsin1a (ENSDLAG00005016814) ENSDLAG00005030656 hmga1a (ENSDLAG00005016792) ENSDLAG00005016672 ##22 ENSDLAG00005016641 ENSDLAG00005016624 ENSDLAG00005032742 ENSDLAG00005016562 ENSDLAG00005029171 ENSDLAG00005032959 ENSDLAG00005016425 MITF (ENSDLAG00005016175) FRMD4B (ENSDLAG00005015693) LMOD3 (ENSDLAG00005015682) ARL6IP5 (ENSDLAG00005015672) UBA3 (ENSDLAG00005014726) ENSDLAG00005026511 ENSDLAG00005034826 ENSDLAG00005014640 Pinecone sodierfish MODERN SPECIES 21 map3k12 (ENSMMDG00005007583) pcbp2 (ENSMMDG00005007623) ENSMMDG00005008637 PFKFB2 (ENSMMDG00005008736) ENSMMDG00005013597 scube3 (ENSMMDG00005013637) ENSMMDG00005016655 ANKS1A (ENSMMDG00005016664) taf11 (ENSMMDG00005016698) BLTP3A (ENSMMDG00005016702) ilrun (ENSMMDG00005016703) SPDEF (ENSMMDG00005016706) pacsin1a (ENSMMDG00005016719) SMIM29 (ENSMMDG00005016725) ENSMMDG00005016728 GRM4 (ENSMMDG00005016739) ##22 ENSMMDG00005016777 ENSMMDG00005016784 SYT2 (ENSMMDG00005016786) oard1 (ENSMMDG00005016788) guca1b (ENSMMDG00005016790) ENSMMDG00005016793 eif4e3 (ENSMMDG00005016796) ENSMMDG00005016802 mitfb (ENSMMDG00005016805) FRMD4B (ENSMMDG00005017076) LMOD3 (ENSMMDG00005017081) arl6ip5b (ENSMMDG00005017082) UBA3 (ENSMMDG00005017099) ENSMMDG00005017702 ENSMMDG00005017705 Cod MODERN SPECIES ENSGMOG00000009765 pcbp2 (ENSGMOG00000009787) ENSGMOG00000028292 ENSGMOG00000023581 ENSGMOG00000009821 SCUBE3 (ENSGMOG00000009879) ENSGMOG00000035233 ANKS1A (ENSGMOG00000009954) TAF11 (ENSGMOG00000010004) BLTP3A (ENSGMOG00000010011) ILRUN (ENSGMOG00000010041) SPDEF (ENSGMOG00000023283) pacsin1a (ENSGMOG00000010048) ENSGMOG00000026218 hmga1a (ENSGMOG00000024668) ENSGMOG00000010065 ##22 ENSGMOG00000010082 ENSGMOG00000010089 ENSGMOG00000036092 ENSGMOG00000015030 ENSGMOG00000010113 ENSGMOG00000010119 ENSGMOG00000010131 EIF4E3 (ENSGMOG00000010140) ENSGMOG00000010153 MITF (ENSGMOG00000010175) ENSGMOG00000033892 FRMD4B (ENSGMOG00000010202) LMOD3 (ENSGMOG00000028614) ARL6IP5 (ENSGMOG00000010233) UBA3 (ENSGMOG00000010238) Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT00390000017874.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00440000034918.h ENSGT00940000157392.p ENSGT00410000025882.b ENSGT00940000177729 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00390000006988 ENSGT00940000157530.a ENSGT00940000162859.p ENSGT00940000155865.c.a ENSGT00940000165920.a ENSGT00730000111641.a ENSGT00940000156326.a.a ENSGT01020000230354.A.a.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 28 ENSGT00940000153185.a.a.b.h ENSGT00390000017874.b.b ENSGT00940000155806.c.a.d ENSGT00390000013228 ENSGT00600000084428.a.i ENSGT00730000110997.i.a ENSGT00490000043415.k.a.b ENSGT00940000157549.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00440000034918.h ENSGT00440000034918.g.b.a ENSGT00940000157882.j.a ENSGT00940000157392.p ENSGT00410000025882.b.d ENSGT00940000177729.b ENSGT01030000234648.a.b.a.a.a.f.a.c ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a.b ENSGT00940000166065.b.d ENSGT00940000157586.f.d ENSGT00390000006988.fb ENSGT00940000157530.a.h ENSGT00940000162859.p.e ENSGT00940000155865.c.a.c ENSGT00940000167980 ENSGT00940000156326.a.a.b ENSGT01020000230354.A.a.b.f ENSGT00940000159731.e ENSGT00390000008631.a.o.b.e ENSGT00550000074831.l.c.b ENSGT00940000155644.b.a.b.d Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000154967.a.a.a.b ENSGT00940000153185.a.a.b.h ENSGT00390000017874.b.b ENSGT00940000155806.c.a.d ENSGT00390000013228 ENSGT00600000084428.a.i ENSGT00730000110997.i.a ENSGT00490000043415.k.a.b ENSGT00940000157549.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00440000034918.g.b.a ENSGT00940000157882.j.a ENSGT00940000157392.p ENSGT00410000025882.b.d ENSGT00940000177729.b ENSGT01030000234648.a.b.a.a.a.f.a.c ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a.b ENSGT00940000166065.b.d ENSGT00940000157586.f.d ENSGT00390000006988.fb ENSGT00940000157530.a.h ENSGT00940000162859.p.e ENSGT00940000155865.c.a.c ENSGT00940000167980 ENSGT00940000156326.a.a.b ENSGT01020000230354.A.a.b.f ENSGT00940000159731.e ENSGT00390000008631.a.o.b.e ENSGT00550000074831.l.c.b ENSGT00940000155644.b.a.b.d Salmo ANCESTRAL SPECIES 16 ENSGT00940000154967.a.a.a.b ENSGT00940000153185.a.a.b.h ENSGT00390000017874.b.b ENSGT00940000155806.c.a.d ENSGT00390000013228 ENSGT00600000084428.a.i ENSGT00730000110997.i.a ENSGT00490000043415.k.a.b ENSGT00940000157549.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00440000034918.g.b.a ENSGT00940000157882.j.a ENSGT00940000157392.p ENSGT00410000025882.b.d ENSGT00940000177729.b ENSGT01030000234648.a.b.a.a.a.f.a.c ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a.b ENSGT00940000166065.b.d ENSGT00940000157586.f.d ENSGT00390000006988.fb ENSGT00940000157530.a.h ENSGT00940000162859.p.e ENSGT00940000155865.c.a.c ENSGT00940000167980 ENSGT00940000156326.a.a.b ENSGT01020000230354.A.a.b.f ENSGT00390000008631.a.o.b.e ENSGT00550000074831.l.c.b ENSGT00940000155644.b.a.b.d ENSGT00940000162607.a.d Atlantic salmon MODERN SPECIES 6 ENSSSAG00000078181 pfkfb2a (ENSSSAG00000078211) ENSSSAG00000078540 ENSSSAG00000078571 ENSSSAG00000078770 ANKS1A (ENSSSAG00000078820) taf11 (ENSSSAG00000079281) BLTP3A (ENSSSAG00000079287) ILRUN (ENSSSAG00000039345) spdef (ENSSSAG00000079307) pacsin1 (ENSSSAG00000079319) RPS10 (ENSSSAG00000039526) nudt3 (ENSSSAG00000039586) SMIM29 (ENSSSAG00000093782) ENSSSAG00000039652 ENSSSAG00000065547 ##22 ENSSSAG00000085116 ENSSSAG00000040424 ENSSSAG00000040570 ENSSSAG00000108728 ENSSSAG00000103431 ENSSSAG00000110375 ENSSSAG00000040652 ENSSSAG00000091686 ENSSSAG00000040752 ENSSSAG00000040772 ENSSSAG00000040807 MITF (ENSSSAG00000040900) FRMD4B (ENSSSAG00000041833) PRAF3 (ENSSSAG00000041934) ENSSSAG00000041945 River trout MODERN SPECIES 20 ENSSTUG00000037260 scube3 (ENSSTUG00000035254) ENSSTUG00000035194 ANKS1A (ENSSTUG00000034057) taf11 (ENSSTUG00000034012) BLTP3A (ENSSTUG00000033863) SNRPC (ENSSTUG00000033844) ilrun (ENSSTUG00000033830) SPDEF (ENSSTUG00000033816) pacsin1a (ENSSTUG00000033632) rps10 (ENSSTUG00000033496) nudt3a (ENSSTUG00000033477) ENSSTUG00000033459 ENSSTUG00000033452 ENSSTUG00000033448 GRM4 (ENSSTUG00000033384) ##22 ENSSTUG00000033272 ENSSTUG00000033255 ENSSTUG00000033247 SYT2 (ENSSTUG00000033226) oard1 (ENSSTUG00000033221) guca1b (ENSSTUG00000033201) ppp4r2a (ENSSTUG00000033167) ENSSTUG00000033155 eif4e3 (ENSSTUG00000033133) ENSSTUG00000033123 MITF (ENSSTUG00000032663) FRMD4B (ENSSTUG00000032564) arl6ip5b (ENSSTUG00000032544) UBA3 (ENSSTUG00000032430) TAFA3 (ENSSTUG00000032388) Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000154967.a.a.a.b ENSGT00940000153185.a.a.b.h ENSGT00390000017874.b.b ENSGT00940000155806.c.a.d ENSGT00390000013228 ENSGT00600000084428.a.i ENSGT00730000110997.i.a ENSGT00490000043415.k.a.b ENSGT00940000157549.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00440000034918.h ENSGT00940000157882.j.a ENSGT00940000157392.p ENSGT00410000025882.b.d ENSGT00940000177729.b ENSGT01030000234648.a.b.a.a.a.f.a.c ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a.b ENSGT00940000166065.b.d ENSGT00940000157586.f.d ENSGT00390000006988.fb ENSGT00940000157530.a.h ENSGT00940000162859.p.e ENSGT00940000155865.c.a.c ENSGT00940000165920.a.a.b ENSGT00940000156326.a.a.b ENSGT01020000230354.A.a.b.f ENSGT00940000159731.e ENSGT00390000008631.a.o.b.e ENSGT00550000074831.l.c.b ENSGT00940000155644.b.a.b.d Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000153185.a.a.b.h ENSGT00390000017874.b.b ENSGT00940000155806.c.a.d ENSGT00390000013228 ENSGT00600000084428.a.i ENSGT00730000110997.i.a ENSGT00490000043415.k.a.b ENSGT00940000157549.b.a ENSGT00950000182973.a.c.a.d.c ENSGT00440000034918.h ENSGT00440000034918.g.b.a ENSGT00940000157882.j.a ENSGT00940000157983.ab.a.b ENSGT00410000025882.b.d ENSGT00940000177729.b ENSGT01030000234648.a.b.a.a.a.f.a.c ##22 ENSGT00940000160123.e.a ENSGT00390000013981.a.b ENSGT00940000166065.b.d ENSGT00940000157586.f.d ENSGT00390000006988.fb ENSGT00940000162859.p.e ENSGT00940000155865.c.a.c ENSGT00940000165920.a.a.b ENSGT00940000156326.a.a.b ENSGT01020000230354.A.a.b.f ENSGT00940000159731.e ENSGT00390000008631.a.o.b.e ENSGT00550000074831.l.c.b ENSGT00940000162607.a.d ENSGT00940000164303.b.b Coho salmon MODERN SPECIES 8 ENSOKIG00005034438 scube3 (ENSOKIG00005034554) C1orf116 (ENSOKIG00005037665) ANKS1A (ENSOKIG00005037811) ENSOKIG00005038520 taf11 (ENSOKIG00005038557) BLTP3A (ENSOKIG00005038575) ILRUN (ENSOKIG00005038686) SPDEF (ENSOKIG00005038702) pacsin1a (ENSOKIG00005038719) RPS10 (ENSOKIG00005038797) nudt3a (ENSOKIG00005038815) ENSOKIG00005038826 SMIM29 (ENSOKIG00005038848) ENSOKIG00005038860 GRM4 (ENSOKIG00005038876) ##22 ENSOKIG00005038951 ENSOKIG00005039316 ENSOKIG00005039333 SYT2 (ENSOKIG00005039372) OARD1 (ENSOKIG00005039408) ppp4r2a (ENSOKIG00005039499) EIF4E3 (ENSOKIG00005039602) ENSOKIG00005039672 ENSOKIG00005039684 foxp1a (ENSOKIG00005039693) MITF (ENSOKIG00005039723) FRMD4B (ENSOKIG00005039862) LMOD3 (ENSOKIG00005040078) ARL6IP5 (ENSOKIG00005040201) UBA3 (ENSOKIG00005040230) Chinook salmon MODERN SPECIES 7 ENSOTSG00005018525 ENSOTSG00005018624 scube3 (ENSOTSG00005018628) C1orf116 (ENSOTSG00005018632) ANKS1A (ENSOTSG00005018633) taf11 (ENSOTSG00005018636) BLTP3A (ENSOTSG00005018638) SNRPC (ENSOTSG00005018642) ilrun (ENSOTSG00005018644) SPDEF (ENSOTSG00005018646) pacsin1a (ENSOTSG00005018660) rps10 (ENSOTSG00005018869) nudt3a (ENSOTSG00005018871) SMIM29 (ENSOTSG00005018872) ENSOTSG00005018873 GRM4 (ENSOTSG00005018874) ##22 ENSOTSG00005018876 ENSOTSG00005018887 ENSOTSG00005018890 SYT2 (ENSOTSG00005018897) oard1 (ENSOTSG00005018898) eif4e3 (ENSOTSG00005018901) ppp4r2a (ENSOTSG00005018903) ENSOTSG00005018909 foxp1a (ENSOTSG00005018911) MITF (ENSOTSG00005018913) FRMD4B (ENSOTSG00005019020) LMOD3 (ENSOTSG00005019021) arl6ip5b (ENSOTSG00005019023) UBA3 (ENSOTSG00005019024) ENSOTSG00005019059 Rainbow trout MODERN SPECIES 30 ENSOMYG00000041493 ENSOMYG00000042169 ANKS1A (ENSOMYG00000042182) TAF11 (ENSOMYG00000042191) BLTP3A (ENSOMYG00000042224) ENSOMYG00000066450 SNRPC (ENSOMYG00000042274) ILRUN (ENSOMYG00000042270) SPDEF (ENSOMYG00000042277) pacsin1a (ENSOMYG00000042285) RPS10 (ENSOMYG00000042305) ENSOMYG00000042340 ENSOMYG00000048124 SMIM29 (ENSOMYG00000042352) ENSOMYG00000042354 ENSOMYG00000042365 ##22 ENSOMYG00000058885 ENSOMYG00000042384 ENSOMYG00000042400 ENSOMYG00000042405 ENSOMYG00000076775 ENSOMYG00000068047 ENSOMYG00000042422 ENSOMYG00000064683 ENSOMYG00000042428 ENSOMYG00000042446 ppp4r2a (ENSOMYG00000042472) ENSOMYG00000042478 ENSOMYG00000042490 foxp1a (ENSOMYG00000042498) MITF (ENSOMYG00000042524) Huchen MODERN SPECIES 332 ENSHHUG00000029387 scube3 (ENSHHUG00000029074) C1orf116 (ENSHHUG00000029058) ANKS1A (ENSHHUG00000029041) taf11 (ENSHHUG00000029034) BLTP3A (ENSHHUG00000028983) SNRPC (ENSHHUG00000028942) ilrun (ENSHHUG00000028937) SPDEF (ENSHHUG00000028931) pacsin1a (ENSHHUG00000028908) RPS10 (ENSHHUG00000028863) ENSHHUG00000028858 nudt3a (ENSHHUG00000028853) ENSHHUG00000028848 ENSHHUG00000028837 ENSHHUG00000028801 ##22 Salmoninae ANCESTRAL SPECIES 1256 ENSGT00940000177729.a ENSGT01030000234648.a.b.a.a.a.f.a.d ##22 ENSGT00390000013981.a.a Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00940000154967.a.a.a.a ENSGT00940000153185.a.a.b.g ENSGT00390000017874.b.a ENSGT00940000155806.c.a.c ENSGT00990000214154 ENSGT00600000084428.a.j ENSGT00730000110997.i.b ENSGT00490000043415.k.a.a ENSGT00940000157549.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00440000034918.g.b.b ENSGT00940000157882.j.b ENSGT00940000157983.ab ENSGT00410000025882.b.c ENSGT00940000177729.a ENSGT01030000234648.a.b.a.a.a.f.a.d ##22 ENSGT00390000013981.a.a ENSGT00940000166065.b.c ENSGT00940000157586.f.c ENSGT00390000006988.gb ENSGT00940000157530.a.g ENSGT00940000162859.p.f ENSGT00940000155865.c.a.d ENSGT00940000165920.a.a.a ENSGT00730000111641.a ENSGT00940000156326.a.a.a ENSGT01020000230354.A.a.b.e ENSGT00940000159731.f ENSGT00390000008631.a.o.b.f ENSGT00550000074831.l.c.a ENSGT00940000155644.b.a.b.c Salmo ANCESTRAL SPECIES 4 ENSGT00940000154967.a.a.a.a ENSGT00940000153185.a.a.b.g ENSGT00390000017874.b.a ENSGT00940000155806.c.a.c ENSGT00990000214154 ENSGT00600000084428.a.j ENSGT00730000110997.i.b ENSGT00490000043415.k.a.a ENSGT00940000157549.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00440000034918.g.b.b ENSGT00940000157882.j.b ENSGT00940000157983.ab ENSGT00410000025882.b.c ENSGT00940000177729.a ENSGT01030000234648.a.b.a.a.a.f.a.d ##22 ENSGT00390000013981.a.a ENSGT00940000166065.b.c ENSGT00940000157586.f.c ENSGT00390000006988.gb ENSGT00940000157530.a.g ENSGT00940000162859.p.f ENSGT00940000155865.c.a.d ENSGT00940000165920.a.a.a ENSGT00730000111641.a ENSGT00940000156326.a.a.a ENSGT01020000230354.A.a.b.e ENSGT00940000159731.f ENSGT00390000008631.a.o.b.f ENSGT00550000074831.l.c.a ENSGT00940000155644.b.a.b.c Atlantic salmon MODERN SPECIES 4 ENSSSAG00000048868 ENSSSAG00000041951 ENSSSAG00000041866 ENSSSAG00000040333 ENSSSAG00000040103 BLTP3A (ENSSSAG00000039489) ILRUN (ENSSSAG00000079304) SNRPC (ENSSSAG00000039409) SPDEF (ENSSSAG00000039330) pacsin1a (ENSSSAG00000074166) RPS10 (ENSSSAG00000065595) nudt3a (ENSSSAG00000115927) ENSSSAG00000103559 SMIM29 (ENSSSAG00000065565) ENSSSAG00000065560 ENSSSAG00000004685 ##22 ENSSSAG00000065542 ENSSSAG00000091810 ENSSSAG00000089458 ENSSSAG00000065505 ENSSSAG00000065502 ENSSSAG00000065498 ENSSSAG00000065486 MDFIC2 (ENSSSAG00000111369) mitf (ENSSSAG00000064604) frmd4b (ENSSSAG00000064502) LMOD3 (ENSSSAG00000064484) ARL6IP5 (ENSSSAG00000098965) UBA3 (ENSSSAG00000064406) ENSSSAG00000083767 fam19a4 (ENSSSAG00000086359) River trout MODERN SPECIES 23 ENSSTUG00000045450 scube3 (ENSSTUG00000042616) C1orf116 (ENSSTUG00000042430) ANKS1A (ENSSTUG00000038714) ENSSTUG00000038655 BLTP3A (ENSSTUG00000038562) SNRPC (ENSSTUG00000038548) ilrun (ENSSTUG00000038535) SPDEF (ENSSTUG00000038529) pacsin1a (ENSSTUG00000038362) rps10 (ENSSTUG00000038295) ENSSTUG00000038281 ENSSTUG00000038267 ENSSTUG00000038244 ENSSTUG00000038228 GRM4 (ENSSTUG00000038163) ##22 ENSSTUG00000038140 ENSSTUG00000038124 SYT2 (ENSSTUG00000038114) oard1 (ENSSTUG00000038101) guca1b (ENSSTUG00000038083) ppp4r2a (ENSSTUG00000038058) eif4e3 (ENSSTUG00000038040) foxp1a (ENSSTUG00000038017) MDFIC2 (ENSSTUG00000038012) MITF (ENSSTUG00000037895) FRMD4B (ENSSTUG00000037769) LMOD3 (ENSSTUG00000037759) arl6ip5b (ENSSTUG00000037735) UBA3 (ENSSTUG00000037289) ENSSTUG00000037268 Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000154967.a.a.a.a ENSGT00940000153185.a.a.b.g ENSGT00390000017874.b.a ENSGT00940000155806.c.a.c ENSGT00990000214154 ENSGT00600000084428.a.j ENSGT00730000110997.i.b ENSGT00490000043415.k.a.a ENSGT00940000157549.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00440000034918.g.b.b ENSGT00940000157882.j.b ENSGT00940000157983.ab.a.a ENSGT00410000025882.b.c ENSGT00940000177729.a ENSGT01030000234648.a.b.a.a.a.f.a.d ##22 ENSGT00390000013981.a.a ENSGT00940000166065.b.c ENSGT00940000157586.f.c ENSGT00390000006988.gb ENSGT00940000157530.a.g ENSGT00940000162859.p.f ENSGT00940000155865.c.a.d ENSGT00940000165920.a.a.a ENSGT00730000111641.a ENSGT00940000156326.a.a.a ENSGT01020000230354.A.a.b.e ENSGT00940000159731.f ENSGT00390000008631.a.o.b.f ENSGT00550000074831.l.c.a ENSGT00940000155644.b.a.b.c Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000154967.a.a.a.a ENSGT00940000153185.a.a.b.g ENSGT00390000017874.b.a ENSGT00940000155806.c.a.c ENSGT00990000214154 ENSGT00600000084428.a.j ENSGT00730000110997.i.b ENSGT00490000043415.k.a.a ENSGT00940000157549.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00440000034918.g.b.b ENSGT00940000157882.j.b ENSGT00940000157983.ab.a.a ENSGT00410000025882.b.c ENSGT00940000177729.a ENSGT01030000234648.a.b.a.a.a.f.a.d ##22 ENSGT00390000013981.a.a ENSGT00940000166065.b.c ENSGT00940000157586.f.c ENSGT00390000006988.gb ENSGT00940000157530.a.g ENSGT00940000162859.p.f ENSGT00940000155865.c.a.d ENSGT00940000165920.a.a.a ENSGT00730000111641.a ENSGT00940000156326.a.a.a ENSGT01020000230354.A.a.b.e ENSGT00940000159731.f ENSGT00390000008631.a.o.b.f ENSGT00550000074831.l.c.a ENSGT00940000155644.b.a.b.c Coho salmon MODERN SPECIES 16 SCUBE3 (ENSOKIG00005013852) ENSOKIG00005013814 ENSOKIG00005013807 ANKS1A (ENSOKIG00005013688) ENSOKIG00005047506 BLTP3A (ENSOKIG00005047496) SNRPC (ENSOKIG00005047480) ILRUN (ENSOKIG00005047463) SPDEF (ENSOKIG00005047452) pacsin1a (ENSOKIG00005047396) ENSOKIG00005047337 ENSOKIG00005047331 ENSOKIG00005047323 ENSOKIG00005047320 ENSOKIG00005047312 GRM4 (ENSOKIG00005047297) ##22 ENSOKIG00005047284 ENSOKIG00005047271 SYT2 (ENSOKIG00005047233) guca1b (ENSOKIG00005047180) ppp4r2a (ENSOKIG00005047161) EIF4E3 (ENSOKIG00005047152) foxp1a (ENSOKIG00005047142) MDFIC2 (ENSOKIG00005047135) MITF (ENSOKIG00005046858) FRMD4B (ENSOKIG00005046708) LMOD3 (ENSOKIG00005046691) arl6ip5b (ENSOKIG00005046677) UBA3 (ENSOKIG00005046501) TAFA3 (ENSOKIG00005046483) TAFA1 (ENSOKIG00005046480) Chinook salmon MODERN SPECIES 14 ENSOTSG00005004689 scube3 (ENSOTSG00005004686) ENSOTSG00005004681 ANKS1A (ENSOTSG00005002646) ENSOTSG00005002626 BLTP3A (ENSOTSG00005002621) SNRPC (ENSOTSG00005002615) ilrun (ENSOTSG00005002613) SPDEF (ENSOTSG00005042385) pacsin1a (ENSOTSG00005042378) rps10 (ENSOTSG00005042368) ENSOTSG00005042367 ENSOTSG00005042366 ENSOTSG00005042365 ENSOTSG00005042364 GRM4 (ENSOTSG00005042362) ##22 ENSOTSG00005042361 ENSOTSG00005042360 SYT2 (ENSOTSG00005042359) oard1 (ENSOTSG00005042358) guca1b (ENSOTSG00005042353) ppp4r2a (ENSOTSG00005042352) eif4e3 (ENSOTSG00005042351) foxp1a (ENSOTSG00005042350) ENSOTSG00005042349 MITF (ENSOTSG00005042311) FRMD4B (ENSOTSG00005042310) LMOD3 (ENSOTSG00005042308) arl6ip5b (ENSOTSG00005042307) UBA3 (ENSOTSG00005042189) TAFA3 (ENSOTSG00005042188) Rainbow trout MODERN SPECIES 7 ENSOMYG00000034314 ENSOMYG00000064556 Onmy-LAA (ENSOMYG00000034309) ANKS1A (ENSOMYG00000034233) ENSOMYG00000053241 BLTP3A (ENSOMYG00000034194) ru1c (ENSOMYG00000034165) ILRUN (ENSOMYG00000034144) SPDEF (ENSOMYG00000034131) PACSIN1 (ENSOMYG00000033949) ENSOMYG00000034103 ENSOMYG00000059109 socs2b (ENSOMYG00000051998) ENSOMYG00000033921 ENSOMYG00000033908 ENSOMYG00000033863 ##22 ENSOMYG00000033831 ENSOMYG00000033803 ENSOMYG00000033784 ENSOMYG00000033774 ENSOMYG00000033756 ppp4r2a (ENSOMYG00000033725) ENSOMYG00000033738 foxp1a (ENSOMYG00000033705) ENSOMYG00000058567 MITF (ENSOMYG00000033659) FRMD4B (ENSOMYG00000033633) LMOD3 (ENSOMYG00000033623) ARL6IP5 (ENSOMYG00000033611) UBA3 (ENSOMYG00000033007) ENSOMYG00000054036 Huchen MODERN SPECIES 1337 ENSHHUG00000019837 ##22 ENSHHUG00000020152 Northern pike MODERN SPECIES 11 DLGAP4 (ENSELUG00000018599) pfkfb2a (ENSELUG00000018645) ENSELUG00000018702 scube3 (ENSELUG00000018752) ENSELUG00000018775 ANKS1A (ENSELUG00000019007) taf11 (ENSELUG00000019055) BLTP3A (ENSELUG00000001377) SNRPC (ENSELUG00000000815) ILRUN (ENSELUG00000029115) SPDEF (ENSELUG00000019175) pacsin1a (ENSELUG00000019245) nudt3a (ENSELUG00000019268) ENSELUG00000019304 hmga1a (ENSELUG00000019318) GRM4 (ENSELUG00000019340) ##22 ENSELUG00000019514 ENSELUG00000019546 ENSELUG00000019559 SYT2 (ENSELUG00000019591) oard1 (ENSELUG00000019637) guca1b (ENSELUG00000019659) ppp4r2a (ENSELUG00000019694) eif4e3 (ENSELUG00000019727) ENSELUG00000019786 MITF (ENSELUG00000019860) FRMD4B (ENSELUG00000019897) LMOD3 (ENSELUG00000000874) arl6ip5b (ENSELUG00000019922) UBA3 (ENSELUG00000020016) TAFA3 (ENSELUG00000001047) Otomorpha ANCESTRAL SPECIES 157 ENSGT00940000159065.a ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.l ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT00940000157392.p ENSGT00410000025882.b ENSGT00940000167932 ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981 ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00940000165428.c.a ENSGT00940000158040.c ENSGT00940000156637.a ENSGT00940000156777.d ENSGT00440000039564.a.a ENSGT01030000234588.a.a.a.b ENSGT00730000112095 ENSGT00940000154709.a.b.a.b ENSGT00940000156735.d ENSGT00390000009166.a ENSGT01030000234555.a.a.b.a.b.a.d Clupeiformes ANCESTRAL SPECIES 21 ENSGT01070000253766.B.f.b ENSGT00400000022086.b.a.b ENSGT00390000013839.c.b ENSGT00940000158762.f ENSGT00950000182982.B.c.b ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00490000043415.k.a ENSGT00940000157549.b ENSGT00950000182973.a.c.a.d ENSGT00440000034918 ENSGT00940000157882 ENSGT00940000157392.p ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a.f.a ##22 ENSGT00940000160123.e.a ENSGT00390000013981 ENSGT00940000166065.b ENSGT00940000157586.f ENSGT00940000165428.c.a ENSGT00940000158040.c ENSGT00940000156637.a ENSGT00940000156777.d ENSGT01030000234555.a.a.b.a.b.a.d ENSGT00940000155067.b.b ENSGT00940000159939 ENSGT00940000157365 ENSGT00390000010372 ENSGT00940000162211 ENSGT00940000155662.f Denticle herring MODERN SPECIES 1 ENSDCDG00000021436 OSBPL2 (ENSDCDG00000021362) ENSDCDG00000021351 ANKS1A (ENSDCDG00000021081) taf11 (ENSDCDG00000021062) BLTP3A (ENSDCDG00000021051) ilrun (ENSDCDG00000021042) SPDEF (ENSDCDG00000021037) pacsin1a (ENSDCDG00000021035) rps10 (ENSDCDG00000021029) nudt3a (ENSDCDG00000021026) ENSDCDG00000021025 ENSDCDG00000021023 hmga1a (ENSDCDG00000021021) ENSDCDG00000021019 GRM4 (ENSDCDG00000020299) ##22 ENSDCDG00000020292 ENSDCDG00000020290 ENSDCDG00000020285 SYT2 (ENSDCDG00000020280) ENSDCDG00000020273 ENSDCDG00000020269 ENSDCDG00000020267 ENSDCDG00000020263 ENSDCDG00000020261 ENSDCDG00000020259 ENSDCDG00000020256 mybpha (ENSDCDG00000020250) NAV1 (ENSDCDG00000020051) ENSDCDG00000020030 ognb (ENSDCDG00000020025) Atlantic herring MODERN SPECIES 20 ENSCHAG00000008159 ADRM1 (ENSCHAG00000008102) OSBPL2 (ENSCHAG00000007713) ENSCHAG00000007612 ANKS1A (ENSCHAG00000007286) taf11 (ENSCHAG00000007240) BLTP3A (ENSCHAG00000006831) ilrun (ENSCHAG00000006788) SPDEF (ENSCHAG00000006771) pacsin1a (ENSCHAG00000006652) rps10 (ENSCHAG00000006608) nudt3a (ENSCHAG00000006577) ENSCHAG00000006563 SMIM29 (ENSCHAG00000006534) ENSCHAG00000006521 GRM4 (ENSCHAG00000006184) ##22 ENSCHAG00000005879 ENSCHAG00000005848 ENSCHAG00000005820 SYT2 (ENSCHAG00000005753) ENSCHAG00000005745 ENSCHAG00000005721 ENSCHAG00000005698 mybpha (ENSCHAG00000005301) NAV1 (ENSCHAG00000001738) tnnt2a (ENSCHAG00000001562) TEAD3 (ENSCHAG00000001518) ENSCHAG00000001237 ENSCHAG00000001195 ENSCHAG00000001181 LGR6 (ENSCHAG00000001142) Clupeocephala ANCESTRAL SPECIES 296 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.a.a ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Otomorpha ANCESTRAL SPECIES 552 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a Clupeiformes ANCESTRAL SPECIES 514 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00390000004215.a.b.b.d.a ENSGT00940000159430 Denticle herring MODERN SPECIES 3 ENSDCDG00000026663 camk2n1 (ENSDCDG00000026669) ENSDCDG00000026673 ENSDCDG00000026701 cdab (ENSDCDG00000026703) DNAJC16 (ENSDCDG00000026713) CHIA (ENSDCDG00000026776) ADORA1 (ENSDCDG00000026810) ENSDCDG00000026813 cpne5b (ENSDCDG00000026832) KIF21B (ENSDCDG00000027277) LHFPL5 (ENSDCDG00000029852) ENSDCDG00000029870 mapk14b (ENSDCDG00000030172) tmem167b (ENSDCDG00000030374) GRM4 (ENSDCDG00000030378) ##22 ENSDCDG00000030393 ENSDCDG00000030395 LHFPL5 (ENSDCDG00000030397) ENSDCDG00000030427 mapk14b (ENSDCDG00000030848) tmem167b (ENSDCDG00000031042) ENSDCDG00000031044 igfn1.1 (ENSDCDG00000031051) ENSDCDG00000031054 ENSDCDG00000031058 ENSDCDG00000031071 igfn1.1 (ENSDCDG00000031075) ENSDCDG00000031083 ENSDCDG00000031095 ENSDCDG00000031110 Atlantic herring MODERN SPECIES 21 ENSCHAG00000008640 cldn19 (ENSCHAG00000008814) P3H1 (ENSCHAG00000008835) zgc:112255 (ENSCHAG00000009358) ap5b1 (ENSCHAG00000009370) CDC42 (ENSCHAG00000009377) wnt4 (ENSCHAG00000009418) ENSCHAG00000009663 svbp (ENSCHAG00000009669) fbxo2 (ENSCHAG00000009679) PHF13 (ENSCHAG00000009685) DNAJC11 (ENSCHAG00000009695) CAMTA1 (ENSCHAG00000009781) vamp3 (ENSCHAG00000009803) per3 (ENSCHAG00000009823) GRM4 (ENSCHAG00000010062) ##22 igfn1.1 (ENSCHAG00000010293) ENSCHAG00000010508 ENSCHAG00000010769 ENSCHAG00000010919 ENSCHAG00000011040 ENSCHAG00000011142 tcf15 (ENSCHAG00000011206) ENSCHAG00000011229 slc2a10 (ENSCHAG00000011401) slc6a6b (ENSCHAG00000011494) GRIP2 (ENSCHAG00000014722) sec13 (ENSCHAG00000015779) cand2 (ENSCHAG00000015894) rpl32 (ENSCHAG00000016095) ENSCHAG00000016147 Otophysi ANCESTRAL SPECIES 68 ENSGT00940000166858 ENSGT00950000182945.b.a.a.a.a.b.a ENSGT00940000156024.i.b ENSGT00950000183119.a.a ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000154964.y.a ENSGT00940000156792.g.a ENSGT00940000156138.d ENSGT00940000153217 ENSGT00940000158791 ENSGT00940000156496.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981 ENSGT00940000157748 ENSGT00940000160763 ENSGT01050000244882.a.a.b.b ENSGT00940000153709.A.f ENSGT00940000154899.fb.b ENSGT00390000008325.b.a ENSGT00940000165342.a ENSGT00940000157304 ENSGT00390000003017.c.b Characiphysae DUPLICATION Characiphysae ANCESTRAL SPECIES 2 ENSGT00940000166858 ENSGT00950000182945.b.a.a.a.a.b.a ENSGT00940000156024.i.b ENSGT00950000183119.a.a ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000154964.y.a ENSGT00940000156792.g.a ENSGT00940000156138.d ENSGT00940000153217 ENSGT00940000158791 ENSGT00940000156496.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g ENSGT01030000234648.a.b.a.a.a.f.b.a ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981 ENSGT00940000157748 ENSGT00940000160763 ENSGT01050000244882.a.a.b.b ENSGT00940000153709.A.f ENSGT00940000154899.fb.b ENSGT00390000008325.b.a ENSGT00940000157304 ENSGT00390000003017.c.b ENSGT00940000156378.a.b Channel catfish MODERN SPECIES 2 Rhoa (ENSIPUG00000023572) mov10b.1 (ENSIPUG00000023578) capza1a (ENSIPUG00000023582) st7l (ENSIPUG00000023586) wnt2ba (ENSIPUG00000023596) CTTNBP2NL (ENSIPUG00000023599) phc2b (ENSIPUG00000023603) SLC2A1 (ENSIPUG00000023611) RAP1GAP (ENSIPUG00000023615) padi2 (ENSIPUG00000023632) lrig2 (ENSIPUG00000023642) ENSIPUG00000023643 magi3 (ENSIPUG00000023644) ENSIPUG00000023650 ENSIPUG00000023651 GRM4 (ENSIPUG00000023655) ##22 ENSIPUG00000023658 ENSIPUG00000023670 ENSIPUG00000023673 ENSIPUG00000023675 ENSIPUG00000023684 zgc:66479 (ENSIPUG00000023699) tarbp2 (ENSIPUG00000023701) tespa1 (ENSIPUG00000023710) OXTR (ENSIPUG00000023713) ptgis (ENSIPUG00000023715) KCNB1 (ENSIPUG00000023722) stau1 (ENSIPUG00000023725) PBRM1 (ENSIPUG00000023736) CAMK1 (ENSIPUG00000023756) fam3d (ENSIPUG00000023765) Characiphysae_b ANCESTRAL SPECIES ENSGT00940000166858 ENSGT00950000182945.b.a.a.a.a.b.a ENSGT00940000156024.i.b ENSGT00950000183119.a.a ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000154964.y.a ENSGT00940000156792.g.a ENSGT00940000156138.d ENSGT00940000153217 ENSGT00940000158791 ENSGT00940000156496.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g ENSGT01030000234648.a.b.a.a.a.f.b.a ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981 ENSGT00940000157748 ENSGT00940000160763 ENSGT01050000244882.a.a.b.b ENSGT00940000153709.A.f ENSGT00940000154899.fb.b ENSGT00390000008325.b.a ENSGT00940000157304 ENSGT00390000003017.c.b ENSGT00940000156378.a.b Characoidei ANCESTRAL SPECIES ENSGT00940000166858 ENSGT00950000182945.b.a.a.a.a.b.a ENSGT00940000156024.i.b ENSGT00950000183119.a.a ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000154964.y.a ENSGT00940000156792.g.a ENSGT00940000156138.d ENSGT00940000153217 ENSGT00940000158791 ENSGT00940000156496.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g ENSGT01030000234648.a.b.a.a.a.f.b.a ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981 ENSGT00940000157748 ENSGT00940000160763 ENSGT01050000244882.a.a.b.a.a ENSGT00940000153709.A.f ENSGT00940000154899.fb.b ENSGT00390000008325.b.a ENSGT00940000157304 ENSGT00390000003017.c.b ENSGT00940000156378.a.b Red-bellied piranha MODERN SPECIES 53 ENSPNAG00000009761 rhoca (ENSPNAG00000009771) MOV10 (ENSPNAG00000001337) capza1a (ENSPNAG00000009844) st7l (ENSPNAG00000009893) wnt2ba (ENSPNAG00000009924) CTTNBP2NL (ENSPNAG00000009946) phc2b (ENSPNAG00000009988) SLC2A1 (ENSPNAG00000010024) RAP1GAP (ENSPNAG00000010203) padi2 (ENSPNAG00000010251) LRIG2 (ENSPNAG00000010289) MAGI3 (ENSPNAG00000010330) ENSPNAG00000010349 ENSPNAG00000006414 GRM4 (ENSPNAG00000010408) ##22 igfn1.1 (ENSPNAG00000010528) ENSPNAG00000010639 ENSPNAG00000010766 ENSPNAG00000011086 zgc:66479 (ENSPNAG00000001543) tarbp2 (ENSPNAG00000011128) ENSPNAG00000011137 OXTR (ENSPNAG00000007175) ptgis (ENSPNAG00000011160) KCNB1 (ENSPNAG00000011167) ENSPNAG00000001591 stau1 (ENSPNAG00000011323) pbrm1l (ENSPNAG00000011378) CAMK1 (ENSPNAG00000001882) FAM107A (ENSPNAG00000011740) Mexicana tetra MODERN SPECIES 4 ENSAMXG00000031494 rhoca (ENSAMXG00000044075) MOV10 (ENSAMXG00000016524) capza1a (ENSAMXG00000042945) st7l (ENSAMXG00000016534) wnt2ba (ENSAMXG00000016537) CTTNBP2NL (ENSAMXG00000032465) phc2b (ENSAMXG00000016550) SLC2A1 (ENSAMXG00000016554) RAP1GAP (ENSAMXG00000016561) padi2 (ENSAMXG00000031334) LRIG2 (ENSAMXG00000016581) MAGI3 (ENSAMXG00000033644) ENSAMXG00000030379 ENSAMXG00000043122 GRM4 (ENSAMXG00000016591) ##22 igfn1.1 (ENSAMXG00000016601) ENSAMXG00000016616 ENSAMXG00000016622 ENSAMXG00000034652 ENSAMXG00000016632 zgc:66479 (ENSAMXG00000016650) rsph3 (ENSAMXG00000029064) tarbp2 (ENSAMXG00000016665) ENSAMXG00000016692 OXTR (ENSAMXG00000039096) ptgis (ENSAMXG00000016742) KCNB1 (ENSAMXG00000016765) ENSAMXG00000016793 stau1 (ENSAMXG00000016812) pbrm1l (ENSAMXG00000016832) Electric eel MODERN SPECIES 447 padi2 (ENSEEEG00000008658) LRIG2 (ENSEEEG00000008661) ENSEEEG00000008664 ENSEEEG00000008665 ENSEEEG00000008666 GRM4 (ENSEEEG00000008669) ##22 ENSEEEG00000008672 ENSEEEG00000008674 ENSEEEG00000008675 Characiphysae ANCESTRAL SPECIES 2 ENSGT00390000003721.d.a.g.b.f ENSGT00940000156310.p ENSGT01050000244841.A.b.b.b.a ENSGT00390000018596.A.a.a ENSGT01000000215056 ENSGT00940000158931 ENSGT00940000154857.yb.b ENSGT00940000158489.a.b ENSGT00950000183091.B.b ENSGT00940000154899.fb.a ENSGT00940000153709.A.e ENSGT00530000063557.a ENSGT00390000001414 ENSGT00940000153820.a ENSGT00940000155664.a.a ENSGT01030000234648.a.b.a.a.a.f.b.b ##22 ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458.e.a ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.d ENSGT00940000159178 ENSGT00940000161154.a Channel catfish MODERN SPECIES 2 ip6k2a (ENSIPUG00000019219) ENSIPUG00000019236 ENSIPUG00000019245 Cidec (ENSIPUG00000019254) ENSIPUG00000019267 Uqcrc1 (ENSIPUG00000019292) ENSIPUG00000019346 RBM38 (ENSIPUG00000019349) rae1 (ENSIPUG00000019366) KCNB1 (ENSIPUG00000019394) PTGIS (ENSIPUG00000019399) thumpd3 (ENSIPUG00000019415) nprl2 (ENSIPUG00000019456) zmynd10 (ENSIPUG00000019484) rassf1 (ENSIPUG00000019509) GRM4 (ENSIPUG00000019519) ##22 ENSIPUG00000019566 ENSIPUG00000019773 pxmp4 (ENSIPUG00000019783) tgm5l (ENSIPUG00000019808) ENSIPUG00000019846 tgm2b (ENSIPUG00000019862) quo (ENSIPUG00000019899) DLGAP4 (ENSIPUG00000019978) ENSIPUG00000019990 TGIF2 (ENSIPUG00000019999) myl9b (ENSIPUG00000020002) ENSIPUG00000020023 ENSIPUG00000020057 tpra1 (ENSIPUG00000020080) chchd6 (ENSIPUG00000020179) Characiphysae_b ANCESTRAL SPECIES ENSGT00390000003721.d.a.g.b.f ENSGT00940000156310.p ENSGT01050000244841.A.b.b.b.a ENSGT00390000018596.A.a.a ENSGT01000000215056 ENSGT00940000158931 ENSGT00940000154857.yb.b ENSGT00940000158489.a.b ENSGT00950000183091.B.b ENSGT00940000154899.fb.a ENSGT00940000153709.A.e ENSGT00530000063557.a ENSGT00390000001414 ENSGT00940000153820.a ENSGT00940000155664.a.a ENSGT01030000234648.a.b.a.a.a.f.b.b ##22 ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458.e.a ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.d ENSGT00940000159178 ENSGT00940000161154.a Characoidei ANCESTRAL SPECIES ENSGT00390000003721.d.a.g.b.f ENSGT00940000156310.p ENSGT01050000244841.A.b.b.b.a ENSGT00390000018596.A.a.a ENSGT01000000215056 ENSGT00940000158931 ENSGT00940000154857.yb.b ENSGT00940000158489.a.b ENSGT00950000183091.B.b ENSGT00940000154899.fb.a ENSGT00940000153709.A.e ENSGT00530000063557.a ENSGT00390000001414 ENSGT00940000153820.a ENSGT00940000155664.a.a ENSGT01030000234648.a.b.a.a.a.f.b.b ##22 ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458.e.a ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.d ENSGT00940000159178 ENSGT00940000161154.a Red-bellied piranha MODERN SPECIES 204 SEC61A1 (ENSPNAG00000015442) ip6k2a (ENSPNAG00000015370) ENSPNAG00000004908 cidec (ENSPNAG00000015305) ENSPNAG00000015296 uqcrc1 (ENSPNAG00000015283) ENSPNAG00000015219 ENSPNAG00000015123 rae1 (ENSPNAG00000015017) KCNB1 (ENSPNAG00000003336) PTGIS (ENSPNAG00000014941) thumpd3 (ENSPNAG00000014936) nprl2 (ENSPNAG00000014910) zmynd10 (ENSPNAG00000003308) RASSF1 (ENSPNAG00000014865) GRM4 (ENSPNAG00000014851) ##22 Mexicana tetra MODERN SPECIES 4 ENSAMXG00000033066 uqcrc1 (ENSAMXG00000015553) ENSAMXG00000015577 ENSAMXG00000015601 rae1 (ENSAMXG00000015616) KCNB1 (ENSAMXG00000043338) PTGIS (ENSAMXG00000015659) thumpd3 (ENSAMXG00000015683) nprl2 (ENSAMXG00000015712) zmynd10 (ENSAMXG00000015745) ENSAMXG00000033638 ENSAMXG00000029586 RASSF1 (ENSAMXG00000015781) ENSAMXG00000036597 ENSAMXG00000032490 GRM4 (ENSAMXG00000015802) ##22 pxmp4 (ENSAMXG00000033342) tgm5l (ENSAMXG00000015849) ENSAMXG00000030263 tgm2b (ENSAMXG00000015896) quo (ENSAMXG00000015922) DLGAP4 (ENSAMXG00000015954) TGIF2 (ENSAMXG00000015969) myl9b (ENSAMXG00000037619) LPIN3 (ENSAMXG00000016002) tpra1 (ENSAMXG00000038212) chchd6b (ENSAMXG00000016082) PLXNA1 (ENSAMXG00000016127) txnrd3 (ENSAMXG00000016210) CHST13 (ENSAMXG00000038825) SLC41A3 (ENSAMXG00000016224) Electric eel MODERN SPECIES 24 SEC61A1 (ENSEEEG00000024411) ip6k2a (ENSEEEG00000024410) ENSEEEG00000024408 cidec (ENSEEEG00000024407) ENSEEEG00000024406 uqcrc1 (ENSEEEG00000024345) ENSEEEG00000024321 ENSEEEG00000024318 rae1 (ENSEEEG00000024316) KCNB1 (ENSEEEG00000024313) PTGIS (ENSEEEG00000024307) thumpd3 (ENSEEEG00000024304) nprl2 (ENSEEEG00000024303) zmynd10 (ENSEEEG00000024302) RASSF1 (ENSEEEG00000024301) GRM4 (ENSEEEG00000024300) ##22 pxmp4 (ENSEEEG00000024299) tgm5l (ENSEEEG00000024297) ENSEEEG00000024296 tgm2b (ENSEEEG00000024292) quo (ENSEEEG00000024290) ENSEEEG00000024289 ENSEEEG00000024288 TGIF2 (ENSEEEG00000024287) myl9b (ENSEEEG00000024283) LPIN3 (ENSEEEG00000024282) ENSEEEG00000024281 tpra1 (ENSEEEG00000024278) chchd6b (ENSEEEG00000024277) ENSEEEG00000024276 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00950000182945.b.a.a.a.a.b.a ENSGT00940000156024.i.b ENSGT00950000183119.a.a ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000154964.y.a ENSGT00940000156792.g.a ENSGT00940000160024 ENSGT00940000156138.d ENSGT00940000153217 ENSGT00940000158791 ENSGT00940000156496.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981 ENSGT00940000157748 ENSGT00940000160763 ENSGT01050000244882.a.a.b.b ENSGT00940000153709.A.f ENSGT00940000154899.fb.b ENSGT00390000008325.b.a ENSGT00940000165342.a ENSGT00940000157304 ENSGT00390000003017.c.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 9 ENSGT00940000156024.i.b.a ENSGT00950000183119.a.a.b ENSGT00390000000873.a.a.a ENSGT00940000166225.a ENSGT00950000182852.B.a.f ENSGT00940000154964.y.a.a ENSGT00940000156792.g.a.h ENSGT00940000160024.r ENSGT00940000156138.d.a ENSGT00940000153217.f ENSGT00940000158791.c ENSGT00940000156496.a.a.a ENSGT00940000170686 ENSGT00940000174569 ENSGT00390000008414.g.b ENSGT01030000234648.a.b.a.a.a.f.b.c ##22 ENSGT00940000160123.e.b.b.d ENSGT00940000160123.e.b.a.b.c ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d.a ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.c ENSGT00940000157748.y.a ENSGT00940000160763.f ENSGT01050000244882.a.a.b.b.b ENSGT00940000153709.A.f.b ENSGT00940000154899.fb.b.e ENSGT00390000008325.b.a ENSGT00940000157304 ENSGT00390000003017.c.b.c ENSGT00940000156378.a.b.f.a Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00950000182945.b.a.a.a.a.a.b ENSGT00940000156024.i.b.a ENSGT00950000183119.a.a.b ENSGT00390000000873.a.a.a ENSGT00940000166225.a ENSGT00950000182852.B.a.f ENSGT00940000154964.y.a.a ENSGT00940000156792.g.a.h ENSGT00940000160024.r ENSGT00940000156138.d.a ENSGT00940000153217.f ENSGT00940000158791.c ENSGT00940000156496.a.a.a ENSGT00940000163310.k.b ENSGT00390000008414.g.b ENSGT01030000234648.a.b.a.a.a.f.b.c ##22 ENSGT00940000160123.e.b.b.d ENSGT00940000160123.e.b.a.b.c ENSGT00940000160123.e.b.a.a.b.c ENSGT00940000160123.e.b.a.a.b.d.a ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.c ENSGT00940000157748.y.a ENSGT00940000160763.f ENSGT01050000244882.a.a.b.b.b ENSGT00940000153709.A.f.b ENSGT00940000154899.fb.b.e ENSGT00390000008325.b.a ENSGT00940000165342.a ENSGT00390000003017.c.b.d ENSGT00940000156378.a.b.f.b Golden-line barbel MODERN SPECIES 367 MOV10 (ENSSGRG00000041058) capza1a (ENSSGRG00000041170) st7l (ENSSGRG00000041202) st7l (ENSSGRG00000041207) wnt2ba (ENSSGRG00000041400) CTTNBP2NL (ENSSGRG00000041401) phc2b (ENSSGRG00000041402) SLC2A1 (ENSSGRG00000041452) ENSSGRG00000042889 RAP1GAP (ENSSGRG00000042892) padi2 (ENSSGRG00000042938) ENSSGRG00000043033 MAGI3 (ENSSGRG00000043035) ENSSGRG00000043038 ENSSGRG00000043039 GRM4 (ENSSGRG00000043042) ##22 igfn1.1 (ENSSGRG00000043043) ENSSGRG00000043047 ENSSGRG00000043050 ENSSGRG00000043053 ENSSGRG00000043057 zgc:66479 (ENSSGRG00000043060) tarbp2 (ENSSGRG00000043061) ENSSGRG00000043070 Common carp reference MODERN SPECIES 10 ENSCCRG00000029394 MOV10 (ENSCCRG00000015515) capza1a (ENSCCRG00000014107) st7l (ENSCCRG00000013225) wnt2ba (ENSCCRG00000013194) ENSCCRG00000013187 phc2b (ENSCCRG00000015600) ENSCCRG00000060419 ENSCCRG00000008102 ENSCCRG00000012525 padi2 (ENSCCRG00000035188) ENSCCRG00000034975 ENSCCRG00000032257 ENSCCRG00000032269 ENSCCRG00000062926 ENSCCRG00000065215 ##22 igfn1.1 (ENSCCRG00000032296) ENSCCRG00000032304 ENSCCRG00000074886 ENSCCRG00000041964 zgc:66479 (ENSCCRG00000041969) ENSCCRG00000041972 ENSCCRG00000041979 oxtrb (ENSCCRG00000046824) ptgis (ENSCCRG00000052040) ENSCCRG00000063232 ENSCCRG00000054613 ENSCCRG00000052029 pbrm1l (ENSCCRG00000051197) ENSCCRG00000079479 ENSCCRG00000051140 Goldfish MODERN SPECIES 46 ENSCARG00000004827 KCNS1 (ENSCARG00000004825) rhebl1 (ENSCARG00000004804) MTMR14 (ENSCARG00000003602) ENSCARG00000003528 ENSCARG00000003524 LHFPL4 (ENSCARG00000003521) SETD5 (ENSCARG00000003507) si:dkey-19e4.5 (ENSCARG00000003496) RAP1GAP (ENSCARG00000003438) padi2 (ENSCARG00000003382) LRIG2 (ENSCARG00000003303) MAGI3 (ENSCARG00000003250) ENSCARG00000003241 ENSCARG00000003232 GRM4 (ENSCARG00000003101) ##22 igfn1.1 (ENSCARG00000003061) ENSCARG00000003035 ENSCARG00000003001 zgc:66479 (ENSCARG00000002990) tarbp2 (ENSCARG00000002986) ENSCARG00000002974 oxtrb (ENSCARG00000002964) ptgis (ENSCARG00000002797) KCNB1 (ENSCARG00000002771) ENSCARG00000002766 ENSCARG00000002752 stau1 (ENSCARG00000002703) pbrm1l (ENSCARG00000002473) CAMK1 (ENSCARG00000001523) ENSCARG00000001450 Cyprininae ANCESTRAL SPECIES 90 ENSGT00950000182945.b.a.a.a.a.b.a.a ENSGT00940000156024.i.b.b ENSGT00950000183119.a.a.a ENSGT00390000000873.a.a.b ENSGT00940000166225.b ENSGT00950000182852.B.a.e ENSGT00940000154964.y.a.b ENSGT00940000156792.g.a.g ENSGT00940000160024.q.b ENSGT00940000156138.d.b ENSGT00940000153217.e ENSGT00940000158791.d ENSGT00940000156496.a.a.b ENSGT00940000163310.k.b ENSGT00390000008414.g.a ENSGT01030000234648.a.b.a.a.a.f.b.d ##22 ENSGT00940000160123.e.b.b.c ENSGT00940000160123.e.b.a.b.d ENSGT00940000160123.e.b.a.a.b.d.b ENSGT00390000013981.d ENSGT00940000157748.y.b ENSGT00940000160763.e ENSGT01050000244882.a.a.b.b.a ENSGT00940000153709.A.f.a ENSGT00940000154899.fb.b.f Cyprininae_a ANCESTRAL SPECIES 68 ENSGT00950000182945.b.a.a.a.a.b.a.a ENSGT00940000156024.i.b.b ENSGT00950000183119.a.a.a ENSGT00390000000873.a.a.b ENSGT00940000166225.b ENSGT00950000182852.B.a.e ENSGT00940000154964.y.a.b ENSGT00940000156792.g.a.g ENSGT00940000160024.q.b ENSGT00940000156138.d.b ENSGT00940000153217.e ENSGT00940000158791.d ENSGT00940000156496.a.a.b ENSGT00940000164219 ENSGT00390000008414.g.a ENSGT01030000234648.a.b.a.a.a.f.b.d ##22 ENSGT00940000160123.e.b.b.c ENSGT00940000160123.e.b.a.b.d ENSGT00940000160123.e.b.a.a.b.d.b ENSGT00390000013981.d ENSGT00940000157748.y.b ENSGT00940000160763.e ENSGT01050000244882.a.a.b.b.a ENSGT00940000153709.A.f.a ENSGT00940000154899.fb.b.f ENSGT00940000157304 ENSGT00390000003017.c.b.c ENSGT00940000156378.a.b.f.a ENSGT00390000005497.ab ENSGT00950000183004.a.a.b.e ENSGT00940000155048.d.b.b Golden-line barbel MODERN SPECIES 1326 RAP1GAP (ENSSGRG00000035967) padi2 (ENSSGRG00000035959) LRIG2 (ENSSGRG00000035958) ENSSGRG00000035957 MAGI3 (ENSSGRG00000035948) ENSSGRG00000035942 ENSSGRG00000035941 GRM4 (ENSSGRG00000035940) ##22 Common carp reference MODERN SPECIES 16 rhoca (ENSCCRG00000015548) MOV10 (ENSCCRG00000058348) capza1a (ENSCCRG00000080845) wnt2ba (ENSCCRG00000065641) ENSCCRG00000015569 st7l (ENSCCRG00000078921) phc2b (ENSCCRG00000015557) ENSCCRG00000055788 ENSCCRG00000063207 ENSCCRG00000008124 padi2 (ENSCCRG00000058123) ENSCCRG00000071023 ENSCCRG00000076230 ENSCCRG00000065591 ENSCCRG00000032290 ENSCCRG00000022902 ##22 igfn1.1 (ENSCCRG00000061957) ENSCCRG00000044705 zgc:66479 (ENSCCRG00000044701) tarbp2 (ENSCCRG00000044694) ENSCCRG00000044680 oxtrb (ENSCCRG00000001302) ptgis (ENSCCRG00000043465) ENSCCRG00000072372 stau1 (ENSCCRG00000051957) pbrm1l (ENSCCRG00000051904) ENSCCRG00000051146 FAM107A (ENSCCRG00000017297) cfap20dc (ENSCCRG00000017302) ENSCCRG00000061356 PTPRG (ENSCCRG00000071645) Goldfish MODERN SPECIES 24 rhoca (ENSCARG00000033226) MOV10 (ENSCARG00000033251) capza1a (ENSCARG00000033681) st7l (ENSCARG00000035538) wnt2ba (ENSCARG00000036604) CTTNBP2NL (ENSCARG00000036641) phc2b (ENSCARG00000036806) SLC2A1 (ENSCARG00000036904) ENSCARG00000037999 RAP1GAP (ENSCARG00000038031) padi2 (ENSCARG00000038082) LRIG2 (ENSCARG00000038478) MAGI3 (ENSCARG00000039464) ENSCARG00000040439 ENSCARG00000040545 GRM4 (ENSCARG00000040594) ##22 igfn1.1 (ENSCARG00000040941) ENSCARG00000041190 zgc:66479 (ENSCARG00000041363) tarbp2 (ENSCARG00000041417) ENSCARG00000041481 oxtrb (ENSCARG00000041511) ptgis (ENSCARG00000041534) KCNB1 (ENSCARG00000041729) ENSCARG00000041735 stau1 (ENSCARG00000041776) pbrm1l (ENSCARG00000042350) CAMK1 (ENSCARG00000043428) ENSCARG00000044090 cfap20dc (ENSCARG00000044127) PTPRG (ENSCARG00000044224) Zebrafish MODERN SPECIES 21 rhoca (ENSDARG00000021309) MOV10 (ENSDARG00000015829) capza1a (ENSDARG00000034240) st7l (ENSDARG00000032603) wnt2ba (ENSDARG00000005050) CTTNBP2NL (ENSDARG00000053179) phc2b (ENSDARG00000013224) SLC2A1 (ENSDARG00000007412) ENSDARG00000086490 RAP1GAP (ENSDARG00000053272) padi2 (ENSDARG00000044167) LRIG2 (ENSDARG00000078561) MAGI3 (ENSDARG00000025974) ENSDARG00000086724 ENSDARG00000100446 GRM4 (ENSDARG00000040156) ##22 igfn1.1 (ENSDARG00000005526) ENSDARG00000097613 ENSDARG00000086028 ENSDARG00000075926 zgc:66479 (ENSDARG00000008732) tarbp2 (ENSDARG00000070471) ENSDARG00000053311 oxtrb (ENSDARG00000044175) ptgis (ENSDARG00000060094) KCNB1 (ENSDARG00000060095) ENSDARG00000079897 ENSDARG00000028862 stau1 (ENSDARG00000044182) pbrm1l (ENSDARG00000077038) CAMK1 (ENSDARG00000060116) Euteleosteomorpha ANCESTRAL SPECIES 22 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00940000165292 ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.a.a ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00940000163310.k.b ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00940000163310.k.b ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Tiger tail seahorse MODERN SPECIES 82 ENSHCOG00000001754 MAGI3 (ENSHCOG00000001732) LRIG2 (ENSHCOG00000001695) padi2 (ENSHCOG00000001680) RAP1GAP (ENSHCOG00000001665) ENSHCOG00000001633 SLC2A1 (ENSHCOG00000001627) phc2b (ENSHCOG00000001617) ENSHCOG00000001608 snrpc (ENSHCOG00000001596) ilrun (ENSHCOG00000001590) SPDEF (ENSHCOG00000001583) pacsin1b (ENSHCOG00000001573) rps10 (ENSHCOG00000001560) nudt3b (ENSHCOG00000001555) GRM4 (ENSHCOG00000001550) ##22 igfn1.1 (ENSHCOG00000001545) ENSHCOG00000001530 ENSHCOG00000001508 SYT2 (ENSHCOG00000001474) mybphb (ENSHCOG00000000571) NAV1 (ENSHCOG00000001436) ENSHCOG00000001393 csrp1b (ENSHCOG00000001389) tnni1b (ENSHCOG00000001383) ENSHCOG00000001371 ENSHCOG00000001365 smpd2a (ENSHCOG00000001358) tead3b (ENSHCOG00000001354) ENSHCOG00000001348 ADORA3 (ENSHCOG00000001344) Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000163310.k.b ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a Cichlidae ANCESTRAL SPECIES 1 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Haplochromini ANCESTRAL SPECIES 1 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Haplochromini_A ANCESTRAL SPECIES ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Haplochromini_B ANCESTRAL SPECIES ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.n Zebra mbuna MODERN SPECIES 1108 MAGI3 (ENSMZEG00005001917) LRIG2 (ENSMZEG00005001965) padi2 (ENSMZEG00005001990) RAP1GAP (ENSMZEG00005002028) SLC2A1 (ENSMZEG00005002073) ENSMZEG00005002101 ENSMZEG00005002127 ENSMZEG00005002149 ANKS1A (ENSMZEG00005002164) snrpc (ENSMZEG00005002199) ilrun (ENSMZEG00005002206) SPDEF (ENSMZEG00005002226) pacsin1b (ENSMZEG00005002257) rps10 (ENSMZEG00005002276) nudt3b (ENSMZEG00005002284) GRM4 (ENSMZEG00005002311) ##22 ENSMZEG00005002358 ENSMZEG00005002367 ENSMZEG00005002451 ENSMZEG00005002589 SYT2 (ENSMZEG00005002615) mybphb (ENSMZEG00005002628) NAV1 (ENSMZEG00005002646) csrp1b (ENSMZEG00005002716) tnni1b (ENSMZEG00005002731) ENSMZEG00005002768 PKP1 (ENSMZEG00005002931) smpd2a (ENSMZEG00005002958) tead3b (ENSMZEG00005002990) ENSMZEG00005003077 ADORA3 (ENSMZEG00005003103) Eastern happy MODERN SPECIES 17 ENSACLG00000001311 MAGI3 (ENSACLG00000001174) LRIG2 (ENSACLG00000001147) padi2 (ENSACLG00000001118) RAP1GAP (ENSACLG00000001005) SLC2A1 (ENSACLG00000000935) ENSACLG00000000893 ENSACLG00000000876 ANKS1A (ENSACLG00000000853) snrpc (ENSACLG00000000843) ilrun (ENSACLG00000000818) SPDEF (ENSACLG00000000801) pacsin1b (ENSACLG00000000768) rps10 (ENSACLG00000000755) nudt3b (ENSACLG00000000730) GRM4 (ENSACLG00000000676) ##22 ENSACLG00000000512 ENSACLG00000000387 ENSACLG00000000179 ENSACLG00000000150 SYT2 (ENSACLG00000000137) mybphb (ENSACLG00000000129) NAV1 (ENSACLG00000000040) csrp1b (ENSACLG00000023130) tnni1b (ENSACLG00000023120) ENSACLG00000022933 PKP1 (ENSACLG00000022905) smpd2a (ENSACLG00000022892) tead3b (ENSACLG00000022697) ENSACLG00000022662 ADORA3 (ENSACLG00000022638) P. nyererei MODERN SPECIES 329 MAGI3 (ENSPNYG00000004487) LRIG2 (ENSPNYG00000004534) padi2 (ENSPNYG00000004550) RAP1GAP (ENSPNYG00000004584) SLC2A1 (ENSPNYG00000004661) ENSPNYG00000004717 ENSPNYG00000004747 ENSPNYG00000004783 ANKS1A (ENSPNYG00000004851) snrpc (ENSPNYG00000004900) ilrun (ENSPNYG00000004926) SPDEF (ENSPNYG00000004949) pacsin1b (ENSPNYG00000004974) rps10 (ENSPNYG00000005008) nudt3b (ENSPNYG00000005021) GRM4 (ENSPNYG00000005053) ##22 ENSPNYG00000005106 ENSPNYG00000005137 ENSPNYG00000005207 ENSPNYG00000005289 SYT2 (ENSPNYG00000005311) mybphb (ENSPNYG00000005332) NAV1 (ENSPNYG00000005359) csrp1b (ENSPNYG00000005431) tnni1b (ENSPNYG00000005459) ENSPNYG00000005495 PKP1 (ENSPNYG00000005548) smpd2a (ENSPNYG00000005567) tead3b (ENSPNYG00000005612) ENSPNYG00000005670 ADORA3 (ENSPNYG00000005712) Burton s mouthbrooder MODERN SPECIES 290 MAGI3 (ENSHBUG00000000329) LRIG2 (ENSHBUG00000011830) padi2 (ENSHBUG00000011820) RAP1GAP (ENSHBUG00000011803) SLC2A1 (ENSHBUG00000011765) ENSHBUG00000011734 ENSHBUG00000011706 ENSHBUG00000011683 ANKS1A (ENSHBUG00000011669) snrpc (ENSHBUG00000011637) ilrun (ENSHBUG00000011627) SPDEF (ENSHBUG00000011607) pacsin1b (ENSHBUG00000011583) rps10 (ENSHBUG00000011566) nudt3b (ENSHBUG00000011550) GRM4 (ENSHBUG00000011533) ##22 ENSHBUG00000011488 ENSHBUG00000011389 ENSHBUG00000011298 ENSHBUG00000011017 SYT2 (ENSHBUG00000011009) mybphb (ENSHBUG00000010955) NAV1 (ENSHBUG00000010887) csrp1b (ENSHBUG00000010771) tnni1b (ENSHBUG00000010748) ENSHBUG00000010708 ENSHBUG00000010676 tead3b (ENSHBUG00000010605) ENSHBUG00000010377 Lyretail cichlid MODERN SPECIES 294 MAGI3 (ENSNBRG00000009969) LRIG2 (ENSNBRG00000009907) padi2 (ENSNBRG00000009735) RAP1GAP (ENSNBRG00000009645) SLC2A1 (ENSNBRG00000009585) phc2b (ENSNBRG00000009433) ENSNBRG00000009398 ENSNBRG00000009392 ANKS1A (ENSNBRG00000009341) snrpc (ENSNBRG00000009297) ilrun (ENSNBRG00000009272) SPDEF (ENSNBRG00000009239) pacsin1b (ENSNBRG00000009125) rps10 (ENSNBRG00000009084) nudt3b (ENSNBRG00000009064) GRM4 (ENSNBRG00000009022) ##22 ENSNBRG00000008957 ENSNBRG00000008881 ENSNBRG00000008779 ENSNBRG00000008745 SYT2 (ENSNBRG00000008667) mybphb (ENSNBRG00000008627) NAV1 (ENSNBRG00000008543) csrp1b (ENSNBRG00000008508) tnni1b (ENSNBRG00000008476) ENSNBRG00000008446 ENSNBRG00000008424 smpd2a (ENSNBRG00000008403) tead3b (ENSNBRG00000008369) ENSNBRG00000008303 ENSNBRG00000008293 Nile tilapia MODERN SPECIES 17 ENSONIG00000034263 MAGI3 (ENSONIG00000014790) LRIG2 (ENSONIG00000014788) padi2 (ENSONIG00000014783) RAP1GAP (ENSONIG00000014775) glut1 (ENSONIG00000014767) phc2b (ENSONIG00000014763) ENSONIG00000014761 ANKS1A (ENSONIG00000014758) ENSONIG00000033132 ilrun (ENSONIG00000014754) SPDEF (ENSONIG00000014752) pacsin1b (ENSONIG00000014749) rps10 (ENSONIG00000014744) nudt3b (ENSONIG00000014742) GRM4 (ENSONIG00000014738) ##22 igfn1.1 (ENSONIG00000014736) ENSONIG00000014732 ENSONIG00000031324 ENSONIG00000022671 SYT2 (ENSONIG00000029530) mybphb (ENSONIG00000014722) NAV1 (ENSONIG00000014720) csrp1b (ENSONIG00000014714) tnni1b (ENSONIG00000014712) ENSONIG00000014705 ENSONIG00000014703 smpd2a (ENSONIG00000014702) tead3b (ENSONIG00000014698) ENSONIG00000014697 ENSONIG00000014695 Midas cichlid MODERN SPECIES 867 ENSACIG00000011443 MAGI3 (ENSACIG00000011370) LRIG2 (ENSACIG00000011319) padi2 (ENSACIG00000011164) RAP1GAP (ENSACIG00000011117) SLC2A1 (ENSACIG00000011092) phc2b (ENSACIG00000010948) ENSACIG00000010922 ANKS1A (ENSACIG00000010885) snrpc (ENSACIG00000010867) ilrun (ENSACIG00000010853) SPDEF (ENSACIG00000010833) pacsin1b (ENSACIG00000010810) rps10 (ENSACIG00000010800) nudt3b (ENSACIG00000010785) GRM4 (ENSACIG00000010762) ##22 ENSACIG00000010704 ENSACIG00000010651 ENSACIG00000010493 SYT2 (ENSACIG00000010463) mybphb (ENSACIG00000010317) NAV1 (ENSACIG00000010245) csrp1b (ENSACIG00000010225) tnni1b (ENSACIG00000010207) ENSACIG00000010133 ENSACIG00000010117 smpd2a (ENSACIG00000010069) tead3b (ENSACIG00000009716) ENSACIG00000009656 ENSACIG00000009649 ENSACIG00000009643 Pomacentridae ANCESTRAL SPECIES 56 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a Bicolor damselfish MODERN SPECIES 241 ENSSPAG00000000465 MAGI3 (ENSSPAG00000000505) LRIG2 (ENSSPAG00000000656) padi2 (ENSSPAG00000000670) RAP1GAP (ENSSPAG00000000689) SLC2A1 (ENSSPAG00000000791) phc2b (ENSSPAG00000000850) ENSSPAG00000000862 ANKS1A (ENSSPAG00000000868) snrpc (ENSSPAG00000000914) ilrun (ENSSPAG00000000921) SPDEF (ENSSPAG00000000942) pacsin1b (ENSSPAG00000000962) rps10 (ENSSPAG00000001013) nudt3b (ENSSPAG00000001034) GRM4 (ENSSPAG00000001061) ##22 ENSSPAG00000001122 ENSSPAG00000001273 ENSSPAG00000001329 ENSSPAG00000001532 ENSSPAG00000001630 SYT2 (ENSSPAG00000001643) mybphb (ENSSPAG00000001684) NAV1 (ENSSPAG00000001711) csrp1b (ENSSPAG00000001776) tnni1b (ENSSPAG00000001794) ENSSPAG00000001813 ENSSPAG00000001837 smpd2a (ENSSPAG00000001844) tead3b (ENSSPAG00000001869) ENSSPAG00000001974 Pomacentridae_A ANCESTRAL SPECIES 72 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b Amphiprion ANCESTRAL SPECIES 133 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000155094.a Clown anemonefish MODERN SPECIES 1017 snrpc (ENSAOCG00000021151) ilrun (ENSAOCG00000021181) SPDEF (ENSAOCG00000002774) pacsin1b (ENSAOCG00000021240) rps10 (ENSAOCG00000021264) nudt3b (ENSAOCG00000021293) GRM4 (ENSAOCG00000021348) ##22 ENSAOCG00000021515 ENSAOCG00000021641 ENSAOCG00000021706 ENSAOCG00000021891 ENSAOCG00000021928 ENSAOCG00000021942 SYT2 (ENSAOCG00000021956) mybphb (ENSAOCG00000021968) NAV1 (ENSAOCG00000022044) ENSAOCG00000022058 Orange clownfish MODERN SPECIES 20 ENSAPEG00000023647 MAGI3 (ENSAPEG00000023545) LRIG2 (ENSAPEG00000023495) padi2 (ENSAPEG00000023471) RAP1GAP (ENSAPEG00000023448) SLC2A1 (ENSAPEG00000023415) phc2b (ENSAPEG00000023278) ENSAPEG00000023252 ANKS1A (ENSAPEG00000023226) snrpc (ENSAPEG00000023221) ilrun (ENSAPEG00000023186) SPDEF (ENSAPEG00000023160) pacsin1b (ENSAPEG00000023139) rps10 (ENSAPEG00000023100) nudt3b (ENSAPEG00000023085) GRM4 (ENSAPEG00000023066) ##22 ENSAPEG00000023034 ENSAPEG00000022999 ENSAPEG00000022948 ENSAPEG00000022895 ENSAPEG00000022879 ENSAPEG00000022861 SYT2 (ENSAPEG00000022843) mybphb (ENSAPEG00000022802) ENSAPEG00000022719 NAV1 (ENSAPEG00000022675) ENSAPEG00000022662 C1QB (ENSAPEG00000022650) ENSAPEG00000022635 C1QA (ENSAPEG00000022623) dnase1l4.1 (ENSAPEG00000022607) Spiny chromis MODERN SPECIES 354 SPDEF (ENSAPOG00000010069) pacsin1b (ENSAPOG00000010031) rps10 (ENSAPOG00000010000) nudt3b (ENSAPOG00000009989) GRM4 (ENSAPOG00000009946) ##22 ENSAPOG00000009863 PDZD8 (ENSAPOG00000009843) ENSAPOG00000009801 ENSAPOG00000009791 exo1 (ENSAPOG00000009757) yipf4 (ENSAPOG00000009576) BIRC6 (ENSAPOG00000009525) ENSAPOG00000009104 ttc27 (ENSAPOG00000009088) Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00940000163310.k.b ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Oryzias ANCESTRAL SPECIES 1 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.c.b.q.a ENSGT01030000234528.B.b.a.a.a.c.b.q.b ENSGT00940000168601 ENSGT00940000156629 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.c.b.q.a ENSGT01030000234528.B.b.a.a.a.c.b.q.b ENSGT00940000168601 ENSGT00940000156629 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000007605 LRIG2 (ENSORLG00000007549) padi2 (ENSORLG00000007539) RAP1GAP (ENSORLG00000007499) ENSORLG00000007473 phc2b (ENSORLG00000007405) ENSORLG00000007369 ENSORLG00000007347 ENSORLG00000024947 snrpc (ENSORLG00000007308) ilrun (ENSORLG00000027412) SPDEF (ENSORLG00000029267) pacsin1b (ENSORLG00000007282) rps10 (ENSORLG00000007257) nudt3b (ENSORLG00000025270) ENSORLG00000007238 ##22 ENSORLG00000023973 ENSORLG00000007183 ENSORLG00000028532 ENSORLG00000022198 ENSORLG00000007159 mybphb (ENSORLG00000007135) NAV1 (ENSORLG00000007109) ENSORLG00000026873 csrp1b (ENSORLG00000007008) tnni1b (ENSORLG00000006990) CELA1 (ENSORLG00000006967) ENSORLG00000006922 ENSORLG00000025997 ENSORLG00000006894 smarcd1 (ENSORLG00000006870) Chinese medaka MODERN SPECIES 957 ENSOSIG00000016477 ENSOSIG00000016476 MAGI3 (ENSOSIG00000016422) LRIG2 (ENSOSIG00000016044) RAP1GAP (ENSOSIG00000016035) SLC2A1 (ENSOSIG00000014751) phc2b (ENSOSIG00000014729) ENSOSIG00000014726 ENSOSIG00000014724 snrpc (ENSOSIG00000014723) ilrun (ENSOSIG00000014722) SPDEF (ENSOSIG00000014606) pacsin1b (ENSOSIG00000014592) rps10 (ENSOSIG00000014584) nudt3b (ENSOSIG00000014582) GRM4 (ENSOSIG00000014580) ##22 igfn1.1 (ENSOSIG00000014578) ENSOSIG00000014573 ENSOSIG00000014568 ENSOSIG00000014562 SYT2 (ENSOSIG00000014558) mybphb (ENSOSIG00000014545) ENSOSIG00000014542 NAV1 (ENSOSIG00000013856) csrp1b (ENSOSIG00000013830) tnni1b (ENSOSIG00000013825) CELA1 (ENSOSIG00000013817) ENSOSIG00000013798 smarcd1 (ENSOSIG00000010315) gpd1b (ENSOSIG00000010286) cers5 (ENSOSIG00000010281) Oryzias_b ANCESTRAL SPECIES 3 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.c.b.q.a ENSGT01030000234528.B.b.a.a.a.c.b.q.b ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b Indian medaka MODERN SPECIES 8 MAGI3 (ENSOMEG00000011228) LRIG2 (ENSOMEG00000011295) padi2 (ENSOMEG00000011329) padi2 (ENSOMEG00000011365) RAP1GAP (ENSOMEG00000011639) SLC2A1 (ENSOMEG00000011730) phc2b (ENSOMEG00000011817) ENSOMEG00000011838 ENSOMEG00000011963 snrpc (ENSOMEG00000012014) ilrun (ENSOMEG00000012054) SPDEF (ENSOMEG00000012084) pacsin1b (ENSOMEG00000012156) rps10 (ENSOMEG00000012208) nudt3b (ENSOMEG00000012248) GRM4 (ENSOMEG00000012281) ##22 ENSOMEG00000012442 ENSOMEG00000012547 ENSOMEG00000012697 ENSOMEG00000012734 SYT2 (ENSOMEG00000012840) mybphb (ENSOMEG00000012906) NAV1 (ENSOMEG00000012980) csrp1b (ENSOMEG00000013015) tnni1b (ENSOMEG00000013028) ENSOMEG00000013070 ENSOMEG00000013096 CELA1 (ENSOMEG00000013115) ENSOMEG00000013169 smarcd1 (ENSOMEG00000013234) gpd1b (ENSOMEG00000013286) Javanese ricefish MODERN SPECIES 19 ENSOJAG00000015624 MAGI3 (ENSOJAG00000015676) LRIG2 (ENSOJAG00000015731) padi2 (ENSOJAG00000016057) RAP1GAP (ENSOJAG00000016835) SLC2A1 (ENSOJAG00000017340) phc2b (ENSOJAG00000017713) ENSOJAG00000017734 ENSOJAG00000017744 SNRPC (ENSOJAG00000017772) ilrun (ENSOJAG00000017795) SPDEF (ENSOJAG00000017819) pacsin1b (ENSOJAG00000017834) rps10 (ENSOJAG00000003802) nudt3b (ENSOJAG00000003847) GRM4 (ENSOJAG00000003923) ##22 igfn1.1 (ENSOJAG00000004216) ENSOJAG00000004319 ENSOJAG00000004389 ENSOJAG00000004626 SYT2 (ENSOJAG00000004638) mybphb (ENSOJAG00000004676) NAV1 (ENSOJAG00000004821) csrp1b (ENSOJAG00000005158) tnni1b (ENSOJAG00000005222) CELA1 (ENSOJAG00000005294) ENSOJAG00000005330 ENSOJAG00000005398 smarcd1 (ENSOJAG00000005889) gpd1b (ENSOJAG00000007381) cers5 (ENSOJAG00000007621) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c Mangrove rivulus MODERN SPECIES 11 ENSKMAG00000016855 MAGI3 (ENSKMAG00000016724) LRIG2 (ENSKMAG00000016684) padi2 (ENSKMAG00000016644) RAP1GAP (ENSKMAG00000016533) SLC2A1 (ENSKMAG00000016477) phc2b (ENSKMAG00000016440) ENSKMAG00000016417 ENSKMAG00000016371 snrpc (ENSKMAG00000016356) ilrun (ENSKMAG00000016339) SPDEF (ENSKMAG00000016328) pacsin1b (ENSKMAG00000016303) rps10 (ENSKMAG00000016280) nudt3b (ENSKMAG00000016261) GRM4 (ENSKMAG00000016235) ##22 ENSKMAG00000016195 ENSKMAG00000016152 ENSKMAG00000016084 ENSKMAG00000016052 SYT2 (ENSKMAG00000016008) mybphb (ENSKMAG00000015946) NAV1 (ENSKMAG00000015887) csrp1b (ENSKMAG00000015872) tnni1b (ENSKMAG00000015857) ENSKMAG00000015840 ENSKMAG00000015800 smpd2a (ENSKMAG00000015753) tead3b (ENSKMAG00000015659) ENSKMAG00000015621 ADORA3 (ENSKMAG00000015595) Turquoise killifish MODERN SPECIES 1619 MAGI3 (ENSNFUG00015010562) ENSNFUG00015010610 LRIG2 (ENSNFUG00015010620) ENSNFUG00015010639 padi2 (ENSNFUG00015010699) RAP1GAP (ENSNFUG00015011249) SLC2A1B (ENSNFUG00015011338) phc2b (ENSNFUG00015011435) ENSNFUG00015011446 snrpc (ENSNFUG00015011478) C6H6ORF106 (ENSNFUG00015011493) SPDEF (ENSNFUG00015011501) pacsin1b (ENSNFUG00015011533) RPS10 (ENSNFUG00015011779) NUDT3 (ENSNFUG00015011802) GRM4 (ENSNFUG00015011848) ##22 ENSNFUG00015012008 ENSNFUG00015012022 ENSNFUG00015012054 ENSNFUG00015012063 ENSNFUG00015012067 ENSNFUG00015012077 ENSNFUG00015012095 SYT2 (ENSNFUG00015012105) ENSNFUG00015012117 MYBPHB (ENSNFUG00015012140) NAV1 (ENSNFUG00015012296) ENSNFUG00015012617 ENSNFUG00015012620 csrp1b (ENSNFUG00015012634) tnni1b (ENSNFUG00015012645) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 NAME_4 ANCESTRAL SPECIES 37 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Sheepshead minnow MODERN SPECIES 353 RAP1GAP (ENSCVAG00000014099) SLC2A1 (ENSCVAG00000014127) phc2b (ENSCVAG00000014188) ENSCVAG00000014217 ENSCVAG00000014279 snrpc (ENSCVAG00000014297) ilrun (ENSCVAG00000014325) SPDEF (ENSCVAG00000014366) pacsin1b (ENSCVAG00000014401) rps10 (ENSCVAG00000014422) nudt3b (ENSCVAG00000014455) GRM4 (ENSCVAG00000014517) ##22 ENSCVAG00000014626 ENSCVAG00000014957 ENSCVAG00000015086 ENSCVAG00000015096 SYT2 (ENSCVAG00000015118) mybphb (ENSCVAG00000015134) NAV1 (ENSCVAG00000015186) csrp1b (ENSCVAG00000015201) tnni1b (ENSCVAG00000015214) ENSCVAG00000015221 PKP1 (ENSCVAG00000015234) Mummichog MODERN SPECIES 2219 padi2 (ENSFHEG00000016461) ENSFHEG00000016475 padi2 (ENSFHEG00000016524) RAP1GAP (ENSFHEG00000016558) SLC2A1 (ENSFHEG00000016591) ENSFHEG00000016596 ENSFHEG00000000841 ENSFHEG00000016622 ENSFHEG00000016660 snrpc (ENSFHEG00000016667) ilrun (ENSFHEG00000016680) SPDEF (ENSFHEG00000016716) pacsin1b (ENSFHEG00000016757) rps10 (ENSFHEG00000016772) nudt3b (ENSFHEG00000016797) GRM4 (ENSFHEG00000016829) ##22 ENSFHEG00000016931 ENSFHEG00000016955 ENSFHEG00000017091 ENSFHEG00000017103 SYT2 (ENSFHEG00000017200) mybphb (ENSFHEG00000017210) NAV1 (ENSFHEG00000017293) ENSFHEG00000017309 csrp1b (ENSFHEG00000000435) tnni1b (ENSFHEG00000017364) ENSFHEG00000017375 ENSFHEG00000017390 smpd2a (ENSFHEG00000017395) tead3b (ENSFHEG00000017537) TULP1 (ENSFHEG00000017564) Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.f Poecilia ANCESTRAL SPECIES 25 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000176218 ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.f NAME_6 ANCESTRAL SPECIES 43 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000176218 ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 ENSGT01030000234555.a.a.b.a.b.a.c.f Amazon molly MODERN SPECIES 270 LRIG2 (ENSPFOG00000015867) padi2 (ENSPFOG00000015807) RAP1GAP (ENSPFOG00000015562) ENSPFOG00000021940 ENSPFOG00000015496 SLC2A1 (ENSPFOG00000015424) phc2b (ENSPFOG00000015369) ENSPFOG00000015257 ENSPFOG00000015193 snrpc (ENSPFOG00000015174) ilrun (ENSPFOG00000015161) SPDEF (ENSPFOG00000015137) pacsin1b (ENSPFOG00000015113) rps10 (ENSPFOG00000015072) nudt3b (ENSPFOG00000015050) GRM4 (ENSPFOG00000014917) ##22 igfn1.1 (ENSPFOG00000014846) ENSPFOG00000014782 ENSPFOG00000014722 ENSPFOG00000023959 SYT2 (ENSPFOG00000014693) mybphb (ENSPFOG00000014669) NAV1 (ENSPFOG00000014306) csrp1b (ENSPFOG00000014277) tnni1b (ENSPFOG00000014255) ENSPFOG00000014199 ENSPFOG00000014167 smpd2a (ENSPFOG00000014164) tead3b (ENSPFOG00000013997) ENSPFOG00000013977 ADORA3 (ENSPFOG00000013970) Sailfin molly MODERN SPECIES 501 ENSPLAG00000012305 snrpc (ENSPLAG00000012311) ilrun (ENSPLAG00000012326) SPDEF (ENSPLAG00000012343) pacsin1b (ENSPLAG00000000268) rps10 (ENSPLAG00000012383) nudt3b (ENSPLAG00000012406) GRM4 (ENSPLAG00000012444) ##22 Guppy MODERN SPECIES 457 MAGI3 (ENSPREG00000013589) ENSPREG00000013568 LRIG2 (ENSPREG00000013511) padi2 (ENSPREG00000013395) RAP1GAP (ENSPREG00000013257) SLC2A1 (ENSPREG00000013174) phc2b (ENSPREG00000013115) ENSPREG00000013075 ENSPREG00000013044 snrpc (ENSPREG00000013017) ilrun (ENSPREG00000013006) SPDEF (ENSPREG00000012986) pacsin1b (ENSPREG00000012958) rps10 (ENSPREG00000012922) nudt3b (ENSPREG00000012890) GRM4 (ENSPREG00000012856) ##22 ENSPREG00000012772 ENSPREG00000012733 ENSPREG00000012569 SYT2 (ENSPREG00000012505) mybphb (ENSPREG00000012361) NAV1 (ENSPREG00000012290) csrp1b (ENSPREG00000012264) tnni1b (ENSPREG00000012241) ENSPREG00000012219 PKP1 (ENSPREG00000012195) smpd2a (ENSPREG00000012181) tead3b (ENSPREG00000012159) ENSPREG00000012151 ENSPREG00000012085 ADORA3 (ENSPREG00000012070) Platyfish MODERN SPECIES 12 LRIG2 (ENSXMAG00000017858) padi2 (ENSXMAG00000017865) ENSXMAG00000027635 RAP1GAP (ENSXMAG00000017883) SLC2A1 (ENSXMAG00000017903) phc2b (ENSXMAG00000017915) ENSXMAG00000017919 ENSXMAG00000021563 ENSXMAG00000017925 snrpc (ENSXMAG00000017935) ilrun (ENSXMAG00000017940) SPDEF (ENSXMAG00000017942) pacsin1b (ENSXMAG00000017946) rps10 (ENSXMAG00000028872) nudt3b (ENSXMAG00000017966) GRM4 (ENSXMAG00000017974) ##22 ENSXMAG00000017987 ENSXMAG00000021446 ENSXMAG00000017996 ENSXMAG00000017998 SYT2 (ENSXMAG00000017999) mybphb (ENSXMAG00000018011) NAV1 (ENSXMAG00000018024) csrp1b (ENSXMAG00000018035) tnni1b (ENSXMAG00000018041) ENSXMAG00000018046 PKP1 (ENSXMAG00000018083) smpd2a (ENSXMAG00000018088) tead3b (ENSXMAG00000018099) ENSXMAG00000018117 ENSXMAG00000023370 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Anabantaria ANCESTRAL SPECIES ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Zig-zag eel MODERN SPECIES 19 ENSMAMG00000003442 ENSMAMG00000003453 ENSMAMG00000003478 padi2 (ENSMAMG00000003493) ENSMAMG00000003517 ENSMAMG00000003621 phc2b (ENSMAMG00000003660) ENSMAMG00000003768 ENSMAMG00000003782 SNRPC (ENSMAMG00000027913) ilrun (ENSMAMG00000003871) SPDEF (ENSMAMG00000003895) pacsin1b (ENSMAMG00000003911) rps10 (ENSMAMG00000003945) nudt3b (ENSMAMG00000003977) ENSMAMG00000003997 ##22 igfn1.1 (ENSMAMG00000004051) ENSMAMG00000004123 ENSMAMG00000004257 ENSMAMG00000004418 ENSMAMG00000004441 mybphb (ENSMAMG00000004460) ENSMAMG00000004474 csrp1b (ENSMAMG00000004531) tnni1b (ENSMAMG00000004575) ENSMAMG00000004593 ENSMAMG00000004698 ENSMAMG00000004710 tead3b (ENSMAMG00000004744) ENSMAMG00000004910 ENSMAMG00000026371 Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Climbing perch MODERN SPECIES 18 ENSATEG00000025140 padi2 (ENSATEG00000025139) ENSATEG00000025138 ENSATEG00000025137 phc2b (ENSATEG00000025136) ENSATEG00000025135 ENSATEG00000025134 SNRPC (ENSATEG00000025133) ilrun (ENSATEG00000025132) SPDEF (ENSATEG00000025131) pacsin1b (ENSATEG00000025130) rps10 (ENSATEG00000029580) nudt3b (ENSATEG00000025128) ENSATEG00000025127 ENSATEG00000027622 ENSATEG00000025126 ##22 igfn1.1 (ENSATEG00000025125) ENSATEG00000025124 ENSATEG00000025123 ENSATEG00000025122 ENSATEG00000025121 ENSATEG00000025120 mybphb (ENSATEG00000025119) ENSATEG00000025118 csrp1b (ENSATEG00000025117) tnni1b (ENSATEG00000025116) ENSATEG00000025115 ENSATEG00000025114 ENSATEG00000025113 tead3b (ENSATEG00000025112) ENSATEG00000025111 Siamese fighting fish MODERN SPECIES 16 ENSBSLG00000018207 ENSBSLG00000017209 ENSBSLG00000017163 st3gal8 (ENSBSLG00000017141) ENSBSLG00000017105 REM1 (ENSBSLG00000017033) REM1 (ENSBSLG00000016987) pnp4a (ENSBSLG00000016748) trib3 (ENSBSLG00000016582) ENSBSLG00000015705 ENSBSLG00000015696 ENSBSLG00000015691 ENSBSLG00000015686 ENSBSLG00000015684 nudt3b (ENSBSLG00000015667) GRM4 (ENSBSLG00000015615) ##22 igfn1.1 (ENSBSLG00000015574) ENSBSLG00000015544 ENSBSLG00000015486 ENSBSLG00000015446 ENSBSLG00000015409 SYT2 (ENSBSLG00000015394) mybphb (ENSBSLG00000015262) NAV1 (ENSBSLG00000014725) csrp1b (ENSBSLG00000014634) tnni1b (ENSBSLG00000014621) ENSBSLG00000014614 PKP1 (ENSBSLG00000014611) smpd2a (ENSBSLG00000014593) tead3b (ENSBSLG00000014537) ENSBSLG00000014524 Carangaria ANCESTRAL SPECIES 3 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Pleuronectoidei ANCESTRAL SPECIES 55 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a ENSGT00940000158771 Turbot MODERN SPECIES 18 ENSSMAG00000007304 ENSSMAG00000007350 ENSSMAG00000007413 padi2 (ENSSMAG00000007447) ENSSMAG00000007501 ENSSMAG00000007747 phc2b (ENSSMAG00000007825) ENSSMAG00000007931 ENSSMAG00000007950 ENSSMAG00000033000 SNRPC (ENSSMAG00000029955) ilrun (ENSSMAG00000037168) SPDEF (ENSSMAG00000008095) pacsin1b (ENSSMAG00000008113) nudt3b (ENSSMAG00000008184) ENSSMAG00000008192 ##22 igfn1.1 (ENSSMAG00000008245) ENSSMAG00000008370 ENSSMAG00000008481 ENSSMAG00000008517 ENSSMAG00000008636 ENSSMAG00000008642 mybphb (ENSSMAG00000008659) ENSSMAG00000008943 ENSSMAG00000032805 csrp1b (ENSSMAG00000008808) tnni1b (ENSSMAG00000008824) ENSSMAG00000008926 ENSSMAG00000008963 tead3b (ENSSMAG00000008989) ENSSMAG00000009166 Carangaria_A ANCESTRAL SPECIES 40 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 Barramundi perch MODERN SPECIES 239 MAGI3 (ENSLCAG00010009476) LRIG2 (ENSLCAG00010009495) padi2 (ENSLCAG00010009538) RAP1GAP (ENSLCAG00010009691) SLC2A1 (ENSLCAG00010009747) ENSLCAG00010009879 ENSLCAG00010009881 ENSLCAG00010009883 ENSLCAG00010009891 snrpc (ENSLCAG00010009899) ilrun (ENSLCAG00010009901) SPDEF (ENSLCAG00010009904) pacsin1b (ENSLCAG00010009907) rps10 (ENSLCAG00010009915) nudt3b (ENSLCAG00010009924) GRM4 (ENSLCAG00010009932) ##22 Seriola ANCESTRAL SPECIES 61 ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 Greater amberjack MODERN SPECIES 129 ENSSDUG00000018524 MAGI3 (ENSSDUG00000018552) LRIG2 (ENSSDUG00000018648) padi2 (ENSSDUG00000018679) RAP1GAP (ENSSDUG00000018720) SLC2A1 (ENSSDUG00000018767) phc2b (ENSSDUG00000018822) ENSSDUG00000018853 ENSSDUG00000018873 snrpc (ENSSDUG00000018895) ilrun (ENSSDUG00000018909) SPDEF (ENSSDUG00000018926) pacsin1b (ENSSDUG00000018938) rps10 (ENSSDUG00000018963) nudt3b (ENSSDUG00000018990) GRM4 (ENSSDUG00000019011) ##22 Yellowtail amberjack MODERN SPECIES 2846 SLC2A1 (ENSSLDG00000004833) phc2b (ENSSLDG00000004907) ENSSLDG00000004955 ANKS1A (ENSSLDG00000004980) snrpc (ENSSLDG00000005034) ilrun (ENSSLDG00000005045) SPDEF (ENSSLDG00000005067) pacsin1b (ENSSLDG00000005101) rps10 (ENSSLDG00000005134) nudt3b (ENSSLDG00000005159) GRM4 (ENSSLDG00000005193) ##22 Eupercaria ANCESTRAL SPECIES ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00950000182956.b.b.b.e.a ENSGT00390000009166 ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 angel2 (ENSTNIG00000009275) bmp2k (ENSTNIG00000006803) chodl (ENSTNIG00000006804) ENSTNIG00000006805 bnc2 (ENSTNIG00000006806) ENSTNIG00000006807 tbpl1 (ENSTNIG00000006808) bmp2k (ENSTNIG00000006809) ENSTNIG00000007014 ENSTNIG00000001652 ENSTNIG00000006810 ENSTNIG00000006811 ENSTNIG00000006812 utp11 (ENSTNIG00000006813) FHL3 (ENSTNIG00000006814) ENSTNIG00000000144 ##22 slco2b1 (ENSTNIG00000006848) serpinf1 (ENSTNIG00000006849) ENSTNIG00000006850 ENSTNIG00000000985 ENSTNIG00000006855 slc43a2b (ENSTNIG00000006856) ENSTNIG00000001392 ENSTNIG00000006857 ENSTNIG00000007558 ENSTNIG00000000154 ENSTNIG00000000839 ENSTNIG00000006980 diabloa (ENSTNIG00000006992) dlb (ENSTNIG00000006998) pard6a (ENSTNIG00000006999) Tetraodon MODERN SPECIES 2 MAGI3 (ENSTNIG00000018298) LRIG2 (ENSTNIG00000018299) padi2 (ENSTNIG00000018300) RAP1GAP (ENSTNIG00000018303) appl1 (ENSTNIG00000018301) ENSTNIG00000018302 SLC2A1 (ENSTNIG00000018304) phc2b (ENSTNIG00000018305) ENSTNIG00000018306 snrpc (ENSTNIG00000018307) ilrun (ENSTNIG00000018308) SPDEF (ENSTNIG00000018309) pacsin1b (ENSTNIG00000018310) rps10 (ENSTNIG00000018311) nudt3b (ENSTNIG00000002242) GRM4 (ENSTNIG00000018312) ##22 igfn1.1 (ENSTNIG00000019483) ENSTNIG00000000619 ENSTNIG00000000349 ENSTNIG00000006795 ENSTNIG00000006796 SYT2 (ENSTNIG00000006797) mybphb (ENSTNIG00000005699) NAV1 (ENSTNIG00000005700) ENSTNIG00000000548 srpk1b (ENSTNIG00000006793) ENSTNIG00000006794 KIF21B (ENSTNIG00000007259) cpne5b (ENSTNIG00000007260) ENSTNIG00000007261 ADORA1 (ENSTNIG00000007262) Eupecaria_A ANCESTRAL SPECIES ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Ballan wrasse MODERN SPECIES 34 RAP1GAP (ENSLBEG00000023420) SLC2A1 (ENSLBEG00000023635) phc2b (ENSLBEG00000023688) ENSLBEG00000023772 ANKS1A (ENSLBEG00000023806) snrpc (ENSLBEG00000023881) ilrun (ENSLBEG00000023908) SPDEF (ENSLBEG00000023927) pacsin1b (ENSLBEG00000023960) rps10 (ENSLBEG00000023993) nudt3b (ENSLBEG00000024017) GRM4 (ENSLBEG00000024040) ##22 igfn1.1 (ENSLBEG00000024087) ENSLBEG00000024125 ENSLBEG00000024164 ENSLBEG00000024254 ENSLBEG00000024358 ENSLBEG00000024372 SYT2 (ENSLBEG00000024399) mybphb (ENSLBEG00000024428) NAV1 (ENSLBEG00000024475) csrp1b (ENSLBEG00000024634) tnni1b (ENSLBEG00000024764) ENSLBEG00000024791 ENSLBEG00000024852 smpd2a (ENSLBEG00000024878) tead3b (ENSLBEG00000024973) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000161110.a.a ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 European seabass MODERN SPECIES 10 ENSDLAG00005033529 ENSDLAG00005009001 padi2 (ENSDLAG00005008236) ENSDLAG00005033449 ENSDLAG00005031769 SLC2A1 (ENSDLAG00005006464) phc2b (ENSDLAG00005006380) ENSDLAG00005006364 ENSDLAG00005006317 SNRPC (ENSDLAG00005006306) ilrun (ENSDLAG00005031350) SPDEF (ENSDLAG00005006255) pacsin1b (ENSDLAG00005006128) rps10 (ENSDLAG00005006104) nudt3b (ENSDLAG00005006096) ENSDLAG00005004899 ##22 ENSDLAG00005004718 ENSDLAG00005027867 ENSDLAG00005004587 ENSDLAG00005004437 ENSDLAG00005030077 ENSDLAG00005023606 mybphb (ENSDLAG00005023570) ENSDLAG00005023560 ENSDLAG00005023257 CSRP1 (ENSDLAG00005023237) tnni1b (ENSDLAG00005023229) ENSDLAG00005030074 ENSDLAG00005023209 ENSDLAG00005023191 tead3b (ENSDLAG00005023164) Large yellow croaker MODERN SPECIES 478 MAGI3 (ENSLCRG00005022768) padi2 (ENSLCRG00005022702) LRIG2 (ENSLCRG00005022679) padi2 (ENSLCRG00005022670) RAP1GAP (ENSLCRG00005021812) SLC2A1 (ENSLCRG00005021016) phc2b (ENSLCRG00005021006) ENSLCRG00005020998 ENSLCRG00005020996 snrpc (ENSLCRG00005020993) ilrun (ENSLCRG00005020992) SPDEF (ENSLCRG00005020990) pacsin1b (ENSLCRG00005020820) rps10 (ENSLCRG00005020747) nudt3b (ENSLCRG00005020741) GRM4 (ENSLCRG00005019967) ##22 igfn1.1 (ENSLCRG00005019960) ENSLCRG00005019958 ENSLCRG00005019945 ENSLCRG00005019937 ENSLCRG00005019931 ENSLCRG00005019920 SYT2 (ENSLCRG00005019919) mybphb (ENSLCRG00005019916) NAV1 (ENSLCRG00005019619) csrp1b (ENSLCRG00005019571) tnni1b (ENSLCRG00005019546) ENSLCRG00005019543 ENSLCRG00005019536 smpd2a (ENSLCRG00005019534) tead3b (ENSLCRG00005019514) Gilthead seabream MODERN SPECIES 20 ENSSAUG00010025452 MAGI3 (ENSSAUG00010025455) LRIG2 (ENSSAUG00010025458) padi2 (ENSSAUG00010025461) RAP1GAP (ENSSAUG00010025470) SLC2A1 (ENSSAUG00010026058) phc2b (ENSSAUG00010026250) ENSSAUG00010026255 ENSSAUG00010026261 snrpc (ENSSAUG00010026281) ilrun (ENSSAUG00010026284) SPDEF (ENSSAUG00010026285) pacsin1b (ENSSAUG00010026293) rps10 (ENSSAUG00010026324) nudt3b (ENSSAUG00010026327) GRM4 (ENSSAUG00010026332) ##22 igfn1.1 (ENSSAUG00010026345) ENSSAUG00010026348 ENSSAUG00010026355 ENSSAUG00010026357 ENSSAUG00010026358 SYT2 (ENSSAUG00010026359) mybphb (ENSSAUG00010026361) NAV1 (ENSSAUG00010026401) csrp1b (ENSSAUG00010026534) tnni1b (ENSSAUG00010026535) ENSSAUG00010026537 ENSSAUG00010026540 smpd2a (ENSSAUG00010026543) tead3b (ENSSAUG00010026550) ENSSAUG00010026554 Perciformes ANCESTRAL SPECIES ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Cottioidei ANCESTRAL SPECIES ENSGT00940000156496.a.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00940000177480.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a Lumpfish MODERN SPECIES 20 MAGI3 (ENSCLMG00005000097) LRIG2 (ENSCLMG00005018249) padi2 (ENSCLMG00005018204) RAP1GAP (ENSCLMG00005018097) SLC2A1 (ENSCLMG00005017260) phc2b (ENSCLMG00005017250) ENSCLMG00005017248 ENSCLMG00005017247 ENSCLMG00005017246 snrpc (ENSCLMG00005017244) ilrun (ENSCLMG00005017242) SPDEF (ENSCLMG00005017240) pacsin1b (ENSCLMG00005017138) rps10 (ENSCLMG00005017133) nudt3b (ENSCLMG00005017132) GRM4 (ENSCLMG00005017130) ##22 igfn1.1 (ENSCLMG00005017129) ENSCLMG00005017127 ENSCLMG00005017124 ENSCLMG00005017123 zgc:66479 (ENSCLMG00005017119) ENSCLMG00005017117 SYT2 (ENSCLMG00005017115) mybphb (ENSCLMG00005017109) ENSCLMG00005017104 csrp1b (ENSCLMG00005017095) tnni1b (ENSCLMG00005017092) ENSCLMG00005017083 ENSCLMG00005017079 smpd2a (ENSCLMG00005017078) tead3b (ENSCLMG00005017074) Stickleback MODERN SPECIES 17 MAGI3 (ENSGACG00000004771) ENSGACG00000004789 ENSGACG00000004791 padi2 (ENSGACG00000004797) RAP1GAP (ENSGACG00000004819) SLC2A1 (ENSGACG00000004850) phc2b (ENSGACG00000004874) ENSGACG00000004880 ENSGACG00000004889 snrpc (ENSGACG00000004899) ilrun (ENSGACG00000004904) SPDEF (ENSGACG00000004912) pacsin1b (ENSGACG00000004918) rps10 (ENSGACG00000004926) nudt3b (ENSGACG00000004941) GRM4 (ENSGACG00000004954) ##22 igfn1.1 (ENSGACG00000004985) ENSGACG00000004994 ENSGACG00000005003 ENSGACG00000005005 SYT2 (ENSGACG00000005015) mybphb (ENSGACG00000005023) NAV1 (ENSGACG00000005034) csrp1b (ENSGACG00000005056) tnni1b (ENSGACG00000005095) ENSGACG00000005105 PKP1 (ENSGACG00000005123) smpd2a (ENSGACG00000005132) tead3b (ENSGACG00000005144) ENSGACG00000005153 ADORA3 (ENSGACG00000005160) Perciformes_a ANCESTRAL SPECIES 5 ENSGT00940000161110.a.a ENSGT00940000156496.a.a.j.a ENSGT00940000158791 ENSGT00940000153217 ENSGT00940000156138.d ENSGT00940000156792.g.a ENSGT00940000154964.y.a ENSGT00940000160792 ENSGT00940000155806.c.b ENSGT00730000110997 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918 ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00940000178767 ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.b ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Channel bull blenny MODERN SPECIES 19 ENSCGOG00000002260 MAGI3 (ENSCGOG00000002256) LRIG2 (ENSCGOG00000002220) padi2 (ENSCGOG00000002087) RAP1GAP (ENSCGOG00000001509) SLC2A1 (ENSCGOG00000001421) phc2b (ENSCGOG00000001402) TCP11X1 (ENSCGOG00000001388) ENSCGOG00000001374 snrpc (ENSCGOG00000001364) ilrun (ENSCGOG00000001363) SPDEF (ENSCGOG00000001350) pacsin1b (ENSCGOG00000001328) rps10 (ENSCGOG00000001296) nudt3b (ENSCGOG00000001261) GRM4 (ENSCGOG00000000991) ##22 igfn1.1 (ENSCGOG00000000956) ENSCGOG00000000952 ENSCGOG00000000946 ENSCGOG00000000937 ENSCGOG00000000935 ENSCGOG00000000934 SYT2 (ENSCGOG00000000933) mybphb (ENSCGOG00000000926) NAV1 (ENSCGOG00000000826) csrp1b (ENSCGOG00000000758) tnni1b (ENSCGOG00000000746) ENSCGOG00000000737 ENSCGOG00000000734 smpd2a (ENSCGOG00000000726) tead3b (ENSCGOG00000000716) Pike perch MODERN SPECIES 17 MAGI3 (ENSSLUG00000024710) ENSSLUG00000024702 LRIG2 (ENSSLUG00000024695) padi2 (ENSSLUG00000024676) RAP1GAP (ENSSLUG00000024656) SLC2A1 (ENSSLUG00000024326) phc2b (ENSSLUG00000024259) ENSSLUG00000024252 ANKS1A (ENSSLUG00000024247) snrpc (ENSSLUG00000024246) ilrun (ENSSLUG00000024241) SPDEF (ENSSLUG00000024234) pacsin1b (ENSSLUG00000024170) rps10 (ENSSLUG00000024159) nudt3b (ENSSLUG00000024156) GRM4 (ENSSLUG00000024152) ##22 igfn1.1 (ENSSLUG00000024147) ENSSLUG00000024134 ENSSLUG00000024095 ENSSLUG00000024054 ENSSLUG00000024038 SYT2 (ENSSLUG00000024032) mybphb (ENSSLUG00000024013) ENSSLUG00000024004 NAV1 (ENSSLUG00000023954) csrp1b (ENSSLUG00000023929) tnni1b (ENSSLUG00000023922) ENSSLUG00000023907 PKP1 (ENSSLUG00000023901) smpd2a (ENSSLUG00000023896) tead3b (ENSSLUG00000023882) Pinecone sodierfish MODERN SPECIES 19 ENSMMDG00005001676 ENSMMDG00005001665 LRIG2 (ENSMMDG00005001660) padi2 (ENSMMDG00005001496) RAP1GAP (ENSMMDG00005001415) SLC2A1 (ENSMMDG00005001277) phc2b (ENSMMDG00005001239) ENSMMDG00005001200 ANKS1A (ENSMMDG00005001177) snrpc (ENSMMDG00005001162) ilrun (ENSMMDG00005001152) SPDEF (ENSMMDG00005001126) pacsin1b (ENSMMDG00005001120) rps10 (ENSMMDG00005001117) nudt3b (ENSMMDG00005001114) GRM4 (ENSMMDG00005001100) ##22 igfn1.1 (ENSMMDG00005001096) ENSMMDG00005001085 ENSMMDG00005001079 ENSMMDG00005001074 zgc:66479 (ENSMMDG00005001066) ENSMMDG00005001064 SYT2 (ENSMMDG00005001062) mybphb (ENSMMDG00005001055) ENSMMDG00005001053 NAV1 (ENSMMDG00005001052) csrp1b (ENSMMDG00005001050) ENSMMDG00005001048 ENSMMDG00005001041 smpd2a (ENSMMDG00005001033) tead3b (ENSMMDG00005001028) Cod MODERN SPECIES 4 ENSGMOG00000009106 ENSGMOG00000029915 RBM39 (ENSGMOG00000017567) ENSGMOG00000009599 CPNE1 (ENSGMOG00000011530) GLUT1 (ENSGMOG00000011678) ENSGMOG00000022253 ENSGMOG00000025779 ENSGMOG00000010859 ENSGMOG00000000101 SPDEF (ENSGMOG00000000105) pacsin1b (ENSGMOG00000000108) nudt3b (ENSGMOG00000031793) rps10 (ENSGMOG00000000113) nudt3b (ENSGMOG00000026842) ENSGMOG00000006162 ##22 ENSGMOG00000014887 ENSGMOG00000014926 ENSGMOG00000014978 ENSGMOG00000014996 ENSGMOG00000028656 ENSGMOG00000025882 mybphb (ENSGMOG00000015057) ENSGMOG00000028764 ENSGMOG00000015079 csrp1b (ENSGMOG00000015173) tnni1b (ENSGMOG00000015185) ENSGMOG00000015197 ENSGMOG00000015210 ENSGMOG00000028122 tead3b (ENSGMOG00000023663) Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT00490000043415.k.b ENSGT00940000157549.a ENSGT00950000182973.a.c.a.c ENSGT00440000034918.g.a ENSGT00940000157882 ENSGT01030000234648.a.b.a.a.a.f.b ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a ENSGT00940000157586.e ENSGT00940000158040.d ENSGT00940000156637.b ENSGT01010000223242 ENSGT00940000156777.c ENSGT01030000234588.a.a.a.a ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c ENSGT00390000009166 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 42 ENSGT00490000043415.k.b.b ENSGT00940000157549.a.a ENSGT00950000182973.a.c.a.c.b ENSGT00440000034918.g.a.a ENSGT00940000157882.i.b ENSGT01030000234648.a.b.a.a.a.f.b.g ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a.b ENSGT00940000157586.e.g ENSGT00940000158040.d.b ENSGT00940000156637.b.d ENSGT00940000156777.c.b ENSGT01030000234588.a.a.a.a.d ENSGT00940000156735.c.f ENSGT00950000182956.b.b.b.e.a.i.b ENSGT00940000158771.d ENSGT01030000234555.a.a.b.a.b.a.c.r.b Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00390000012411 ENSGT00530000063735.a.b.c ENSGT00940000158385.j ENSGT00940000156669.b.j ENSGT01100000263475.f.a.d.a.a.b.b ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000156624.d ENSGT00940000156550.a ENSGT00550000074784.a.b ENSGT00490000043415.k.b.b ENSGT00940000157549.a.a ENSGT00950000182973.a.c.a.c.b ENSGT00440000034918.g.a.a ENSGT00940000157882.i.b ENSGT01030000234648.a.b.a.a.a.f.b.g ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a.b ENSGT00940000157586.e.g ENSGT00940000158040.d.b ENSGT00940000156637.b.d ENSGT00940000156777.c.b ENSGT01030000234588.a.a.a.a.d ENSGT00940000156735.c.f ENSGT00950000182956.b.b.b.e.a.i.b ENSGT00940000158771.d ENSGT01030000234555.a.a.b.a.b.a.c.r.b Salmo ANCESTRAL SPECIES 33 ENSGT00940000158385.j ENSGT00940000156669.b.j ENSGT01100000263475.f.a.d.a.a.b.b ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000156624.d ENSGT00940000156550.a ENSGT00550000074784.b.e.b.b ENSGT01090000260263.a.b ENSGT00940000158156.b.b.c ENSGT00490000043415.k.b.b ENSGT00940000157549.a.a ENSGT00950000182973.a.c.a.c.b ENSGT00440000034918.g.a.a ENSGT00940000157882.i.b ENSGT01030000234648.a.b.a.a.a.f.b.g ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a.b ENSGT00940000157586.e.g ENSGT00940000158040.d.b ENSGT00940000156637.b.d ENSGT00940000156777.c.b ENSGT01030000234588.a.a.a.a.d ENSGT00940000156735.c.f ENSGT00950000182956.b.b.b.e.a.j ENSGT00950000182956.b.b.b.e.a.i.b ENSGT00940000158771.d Atlantic salmon MODERN SPECIES 3 ca119 (ENSSSAG00000107955) ENSSSAG00000086731 ENSSSAG00000058444 cpne5b (ENSSSAG00000088360) ENSSSAG00000082539 ENSSSAG00000009852 ENSSSAG00000009801 srpk1b (ENSSSAG00000007612) ENSSSAG00000059592 ENSSSAG00000112867 ilrun (ENSSSAG00000091907) SPDEF (ENSSSAG00000007065) pacsin1b (ENSSSAG00000006799) rps10 (ENSSSAG00000103389) nudt3b (ENSSSAG00000112102) ENSSSAG00000039813 ##22 igfn1.1 (ENSSSAG00000004505) ENSSSAG00000004485 ENSSSAG00000004265 ENSSSAG00000004198 zgc:66479 (ENSSSAG00000004175) ENSSSAG00000004157 ENSSSAG00000111107 mybphb (ENSSSAG00000071742) NAV1 (ENSSSAG00000071694) csrp1 (ENSSSAG00000071677) TNNI1 (ENSSSAG00000071655) PKP1 (ENSSSAG00000071648) ENSSSAG00000071165 ENSSSAG00000077051 ENSSSAG00000113453 River trout MODERN SPECIES 5 ENSSTUG00000016724 irak1bp1 (ENSSTUG00000016729) appl1 (ENSSTUG00000016822) ASB14 (ENSSTUG00000018150) rps23 (ENSSTUG00000018173) ENSSTUG00000018238 atp6ap1la (ENSSTUG00000018243) ENSSTUG00000018255 ENSSTUG00000018256 ilrun (ENSSTUG00000018263) ENSSTUG00000018276 SPDEF (ENSSTUG00000018285) pacsin1b (ENSSTUG00000018306) rps10 (ENSSTUG00000018394) nudt3b (ENSSTUG00000018426) GRM4 (ENSSTUG00000018468) ##22 ENSSTUG00000018634 ENSSTUG00000018915 ENSSTUG00000018979 zgc:66479 (ENSSTUG00000019083) SYT2 (ENSSTUG00000019102) mybphb (ENSSTUG00000019146) NAV1 (ENSSTUG00000019368) csrp1b (ENSSTUG00000019617) tnni1b (ENSSTUG00000019641) PKP1 (ENSSTUG00000019675) tead3b (ENSSTUG00000019715) ENSSTUG00000019906 ENSSTUG00000016360 ADORA3 (ENSSTUG00000016383) rplp2 (ENSSTUG00000016398) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT01100000263475.f.a.d.a.a.b.b ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000156780 ENSGT00940000156624.d ENSGT00940000156550.a ENSGT00550000074784.b.e.b.a.a ENSGT01090000260263.a.b ENSGT00940000158156.b.b.c ENSGT00990000213924 ENSGT00490000043415.k.b.b ENSGT00940000157549.a.a ENSGT00950000182973.a.c.a.c.b ENSGT00440000034918.g.a.a ENSGT00940000157882.i.b ENSGT01030000234648.a.b.a.a.a.f.b.g ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a.b ENSGT00940000157586.e.g.a.b ENSGT00940000158040.d.b ENSGT00940000156637.b.d ENSGT00940000156777.c.b ENSGT01030000234588.a.a.a.a.d ENSGT00940000156735.c.f ENSGT00950000182956.b.b.b.e.a.i.b ENSGT00940000158771.d ENSGT01030000234555.a.a.b.a.b.a.c.r.b Oncorhynchus_a ANCESTRAL SPECIES 54 ENSGT01100000263475.f.a.d.a.a.b.b ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000156780 ENSGT00940000156624.d ENSGT00940000156550.a ENSGT00550000074784.b.e.b.a.a ENSGT01090000260263.a.b ENSGT00940000158156.b.b.c ENSGT00990000213924 ENSGT00490000043415.k.b.b ENSGT00940000157549.a.a ENSGT00950000182973.a.c.a.c.b ENSGT00440000034918.g.a.a ENSGT00940000157882.i.b ENSGT01030000234648.a.b.a.a.a.f.b.g ##22 ENSGT00940000160123.e.b.b ENSGT00940000160123.e.b.a.b ENSGT00940000160123.e.b.a.a.b ENSGT00940000160123.e.b.a.a.a ENSGT00390000013981.b ENSGT00940000166065.a.b ENSGT00940000157586.e.g.a.a ENSGT01000000220204 ENSGT00940000157586.e.g.b ENSGT00940000158040.d.b ENSGT00940000156637.b.d ENSGT00940000156777.c.b ENSGT01030000234588.a.a.a.a.d ENSGT00940000156735.c.f ENSGT00950000182956.b.b.b.e.a.i.b Coho salmon MODERN SPECIES ENSOKIG00005030558 ENSOKIG00005030563 irak1bp1 (ENSOKIG00005030575) appl1 (ENSOKIG00005030714) ASB14 (ENSOKIG00005031770) rps23 (ENSOKIG00005031842) ENSOKIG00005032021 atp6ap1la (ENSOKIG00005032044) ENSOKIG00005032056 ENSOKIG00005032103 ilrun (ENSOKIG00005000011) SPDEF (ENSOKIG00005000031) pacsin1b (ENSOKIG00005000074) rps10 (ENSOKIG00005000098) nudt3b (ENSOKIG00005000119) GRM4 (ENSOKIG00005000180) ##22 igfn1.1 (ENSOKIG00005000236) ENSOKIG00005000258 ENSOKIG00005000300 ENSOKIG00005000356 zgc:66479 (ENSOKIG00005000378) SYT2 (ENSOKIG00005000389) mybphb (ENSOKIG00005000411) NAV1 (ENSOKIG00005000458) csrp1b (ENSOKIG00005000477) tnni1b (ENSOKIG00005000487) PKP1 (ENSOKIG00005000493) TEAD3 (ENSOKIG00005000515) ENSOKIG00005000562 ADORA3 (ENSOKIG00005000573) ENSOKIG00005000583 Chinook salmon MODERN SPECIES 11 appl1 (ENSOTSG00005001556) ASB14 (ENSOTSG00005001538) ENSOTSG00005001537 ENSOTSG00005001535 atp6ap1la (ENSOTSG00005001532) ENSOTSG00005001531 ENSOTSG00005001530 ENSOTSG00005001529 ENSOTSG00005001528 ENSOTSG00005001526 ilrun (ENSOTSG00005001524) SPDEF (ENSOTSG00005001521) pacsin1b (ENSOTSG00005001519) rps10 (ENSOTSG00005001517) nudt3b (ENSOTSG00005001515) GRM4 (ENSOTSG00005001351) ##22 igfn1.1 (ENSOTSG00005001324) ENSOTSG00005001310 ENSOTSG00005001271 ENSOTSG00005001232 zgc:66479 (ENSOTSG00005001225) ENSOTSG00005001222 SYT2 (ENSOTSG00005001217) ENSOTSG00005001210 mybphb (ENSOTSG00005001206) NAV1 (ENSOTSG00005001176) csrp1b (ENSOTSG00005001169) tnni1b (ENSOTSG00005001165) PKP1 (ENSOTSG00005001160) tead3b (ENSOTSG00005001016) ENSOTSG00005000930 Rainbow trout MODERN SPECIES 8 ENSOMYG00000007378 ENSOMYG00000007335 ENSOMYG00000062124 atp6ap1la (ENSOMYG00000007259) ENSOMYG00000058834 ENSOMYG00000007227 ENSOMYG00000007200 ilrun (ENSOMYG00000007170) ENSOMYG00000007125 ENSOMYG00000059957 ENSOMYG00000058362 pacsin1b (ENSOMYG00000007012) rps10 (ENSOMYG00000006863) nudt3b (ENSOMYG00000006824) ENSOMYG00000067513 ENSOMYG00000006672 ##22 igfn1.1 (ENSOMYG00000006509) ENSOMYG00000006434 ENSOMYG00000006174 ENSOMYG00000005815 zgc:66479 (ENSOMYG00000005767) ENSOMYG00000005720 ENSOMYG00000005709 mybphb (ENSOMYG00000005590) NAV1 (ENSOMYG00000005205) ENSOMYG00000049179 csrp1 (ENSOMYG00000027036) tnni1b (ENSOMYG00000026998) PKP1 (ENSOMYG00000026971) tead3b (ENSOMYG00000026879) ENSOMYG00000026732 Huchen MODERN SPECIES 325 ENSHHUG00000048897 ENSHHUG00000048895 ENSHHUG00000048891 ilrun (ENSHHUG00000048875) SPDEF (ENSHHUG00000048871) pacsin1b (ENSHHUG00000048839) rps10 (ENSHHUG00000048807) nudt3b (ENSHHUG00000048787) ENSHHUG00000048778 ##22 igfn1.1 (ENSHHUG00000048756) ENSHHUG00000048708 ENSHHUG00000048698 ENSHHUG00000048685 zgc:66479 (ENSHHUG00000048681) ENSHHUG00000048677 SYT2 (ENSHHUG00000048665) mybphb (ENSHHUG00000048571) ENSHHUG00000048553 ENSHHUG00000048548 ENSHHUG00000048544 ENSHHUG00000048538 Salmoninae ANCESTRAL SPECIES 202 ENSGT00940000158385.i ENSGT00940000156669.b.i ENSGT00940000156780 ENSGT00940000156624.c ENSGT00550000074784.b.e.b.a ENSGT01090000260263.b ENSGT00550000074784.b.e.a ENSGT01090000260263.a.a ENSGT00940000158156.b.b.d ENSGT00730000110997.j ENSGT00490000043415.k.b.a ENSGT00940000157549.a.b ENSGT00950000182973.a.c.a.c.a ENSGT00440000034918.g.a.b ENSGT00940000157882.i.a ENSGT01030000234648.a.b.a.a.a.f.b.h ##22 Huchen MODERN SPECIES 2919 ENSHHUG00000040569 ##22 Salmoninae_a ANCESTRAL SPECIES 25 ENSGT01100000263491.a.b.b.c.b.k.a.b ENSGT01100000263491.a.b.b.c.b.k.b ENSGT00530000063735.a.b.d ENSGT00940000158385.i ENSGT00940000156669.b.i ENSGT00940000156780 ENSGT00940000156624.c ENSGT00550000074784.b.e.b.a.b ENSGT00940000158156.b.b.d ENSGT00730000110997.j ENSGT00490000043415.k.b.a ENSGT00940000157549.a.b ENSGT00950000182973.a.c.a.c.a ENSGT00440000034918.g.a.b ENSGT00940000157882.i.a ENSGT01030000234648.a.b.a.a.a.f.b.h ##22 ENSGT00940000166065.a.a ENSGT00940000157586.e.h ENSGT00940000158040.d.a ENSGT00940000156637.b.c ENSGT01010000223242 ENSGT00940000156777.c.a ENSGT01030000234588.a.a.a.a.c ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c.e ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a.i.a ENSGT00940000158771.c ENSGT01030000234555.a.a.b.a.b.a.c.q ENSGT01030000234555.a.a.b.a.b.b.e ENSGT00550000074828.b.e.a.a Salmo ANCESTRAL SPECIES 6 ENSGT00530000063735.a.b.d ENSGT00940000158385.i ENSGT00940000156669.b.i ENSGT00940000156780 ENSGT00940000156624.c ENSGT00550000074784.b.e.a ENSGT01090000260263.a.a ENSGT00550000074784.b.e.b.a.b ENSGT00940000158156.b.b.d ENSGT00730000110997.j ENSGT00490000043415.k.b.a ENSGT00940000157549.a.b ENSGT00950000182973.a.c.a.c.a ENSGT00440000034918.g.a.b ENSGT00940000157882.i.a ENSGT01030000234648.a.b.a.a.a.f.b.h ##22 ENSGT00940000166065.a.a ENSGT00940000157586.e.h ENSGT00940000158040.d.a ENSGT00940000156637.b.c ENSGT00940000156777.c.a ENSGT01030000234588.a.a.a.a.c ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c.e ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a.i.a ENSGT00940000158771.c ENSGT01030000234555.a.a.b.a.b.a.c.q ENSGT01030000234555.a.a.b.a.b.b.e ENSGT00550000074828.b.e.a.a ENSGT00940000159534.f.a River trout MODERN SPECIES 7 ENSSTUG00000027458 ENSSTUG00000027454 ENSSTUG00000027439 arhgef3 (ENSSTUG00000027320) il17rd (ENSSTUG00000027280) appl1 (ENSSTUG00000026537) ENSSTUG00000026413 rps23 (ENSSTUG00000026351) atp6ap1la (ENSSTUG00000026331) snrpc (ENSSTUG00000026313) ilrun (ENSSTUG00000026291) SPDEF (ENSSTUG00000026287) pacsin1b (ENSSTUG00000026171) rps10 (ENSSTUG00000026057) nudt3b (ENSSTUG00000026003) GRM4 (ENSSTUG00000025710) ##22 ENSSTUG00000025681 ENSSTUG00000025641 SYT2 (ENSSTUG00000025631) mybphb (ENSSTUG00000025361) NAV1 (ENSSTUG00000021698) csrp1b (ENSSTUG00000021573) tnni1b (ENSSTUG00000021493) ENSSTUG00000021480 PKP1 (ENSSTUG00000021463) smpd2a (ENSSTUG00000021445) TEAD3 (ENSSTUG00000021317) ENSSTUG00000021246 ADORA3 (ENSSTUG00000021200) ENSSTUG00000021193 rplp2 (ENSSTUG00000021189) Atlantic salmon MODERN SPECIES 14 ENSSSAG00000088014 ENSSSAG00000087797 ENSSSAG00000110320 ARHGEF3 (ENSSSAG00000073898) il17rd (ENSSSAG00000073937) HESX1 (ENSSSAG00000110298) appl1 (ENSSSAG00000073962) rps23 (ENSSSAG00000007090) atp6ap1la (ENSSSAG00000074146) RU1C (ENSSSAG00000074153) ilrun (ENSSSAG00000007069) SPDEF (ENSSSAG00000074163) pacsin1b (ENSSSAG00000090207) rps10 (ENSSSAG00000074172) nudt3b (ENSSSAG00000084577) ENSSSAG00000074204 ##22 ENSSSAG00000108666 ENSSSAG00000075099 mybphb (ENSSSAG00000075107) NAV1 (ENSSSAG00000075240) csrp1b (ENSSSAG00000102520) tnni1b (ENSSSAG00000115603) ENSSSAG00000076994 PKP1 (ENSSSAG00000076999) ENSSSAG00000077001 tead3b (ENSSSAG00000077012) ENSSSAG00000109092 ENSSSAG00000106632 ENSSSAG00000117259 rplp2 (ENSSSAG00000107879) KCNA10 (ENSSSAG00000077173) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT01030000234555.a.a.b.a.a.a.b.p ENSGT01100000263491.a.b.b.c.b.k.a.b.a ENSGT01100000263491.a.b.b.c.b.k.b ENSGT00530000063735.a.b.d ENSGT00940000158385.i ENSGT00940000156669.b.i ENSGT00940000156624.c ENSGT00550000074784.b.e.a ENSGT00940000158156.b.b.d ENSGT00730000110997.j ENSGT00490000043415.k.b.a ENSGT00940000157549.a.b ENSGT00950000182973.a.c.a.c.a ENSGT00440000034918.g.a.b ENSGT00940000157882.i.a ENSGT01030000234648.a.b.a.a.a.f.b.h ##22 ENSGT00940000166065.a.a ENSGT00940000157586.e.h ENSGT00940000158040.d.a ENSGT00940000156637.b.c ENSGT01010000223242 ENSGT00940000156777.c.a ENSGT01030000234588.a.a.a.a.c ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c.e ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a.i.a ENSGT00940000158771.c ENSGT01030000234555.a.a.b.a.b.a.c.q ENSGT01030000234555.a.a.b.a.b.b.e ENSGT00550000074828.b.e.a.a Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT01030000234555.a.a.b.a.a.a.b.p ENSGT01100000263491.a.b.b.c.b.k.a.b.a ENSGT01100000263491.a.b.b.c.b.k.b ENSGT00530000063735.a.b.d ENSGT00940000158385.i ENSGT00940000156669.b.i ENSGT00940000156624.c ENSGT00550000074784.b.e.a ENSGT00940000158156.b.b.d ENSGT00730000110997.j ENSGT00490000043415.k.b.a ENSGT00940000157549.a.b ENSGT00950000182973.a.c.a.c.a ENSGT00440000034918.g.a.b ENSGT00940000157882.i.a ENSGT01030000234648.a.b.a.a.a.f.b.h ##22 ENSGT00940000166065.a.a ENSGT00940000157586.e.h ENSGT00940000158040.d.a ENSGT00940000156637.b.c ENSGT00940000156777.c.a ENSGT01030000234588.a.a.a.a.c ENSGT00940000154709.a.b.a.a ENSGT00940000156735.c.e ENSGT00390000009166 ENSGT00950000182956.b.b.b.e.a.i.a ENSGT00940000158771.c ENSGT01030000234555.a.a.b.a.b.a.c.q ENSGT01030000234555.a.a.b.a.b.b.e ENSGT00550000074828.b.e.a.a ENSGT00550000074828.b.e.b.b Chinook salmon MODERN SPECIES 31 ENSOTSG00005035027 ADORA1 (ENSOTSG00005035029) ENSOTSG00005035030 ENSOTSG00005035032 arhgef3 (ENSOTSG00005035052) il17rd (ENSOTSG00005037532) appl1 (ENSOTSG00005038445) rps23 (ENSOTSG00005041547) atp6ap1la (ENSOTSG00005041548) snrpc (ENSOTSG00005041549) ilrun (ENSOTSG00005041551) SPDEF (ENSOTSG00005041552) pacsin1b (ENSOTSG00005041553) rps10 (ENSOTSG00005041555) nudt3b (ENSOTSG00005041556) GRM4 (ENSOTSG00005041557) ##22 ENSOTSG00005041558 SYT2 (ENSOTSG00005041559) mybphb (ENSOTSG00005041560) NAV1 (ENSOTSG00005041561) csrp1b (ENSOTSG00005041968) tnni1b (ENSOTSG00005041969) ENSOTSG00005041971 PKP1 (ENSOTSG00005041973) smpd2a (ENSOTSG00005041975) tead3b (ENSOTSG00005041977) ENSOTSG00005029629 ADORA3 (ENSOTSG00005029644) ENSOTSG00005029660 rplp2 (ENSOTSG00005029661) KCNA10 (ENSOTSG00005029663) Coho salmon MODERN SPECIES 25 ENSOKIG00005002102 ENSOKIG00005002113 arhgef3 (ENSOKIG00005002207) il17rd (ENSOKIG00005002393) HESX1 (ENSOKIG00005002428) APPL1 (ENSOKIG00005002587) ENSOKIG00005003348 ENSOKIG00005003379 atp6ap1la (ENSOKIG00005003393) snrpc (ENSOKIG00005003398) ilrun (ENSOKIG00005003404) SPDEF (ENSOKIG00005003413) pacsin1b (ENSOKIG00005003426) rps10 (ENSOKIG00005003466) nudt3b (ENSOKIG00005003491) GRM4 (ENSOKIG00005003510) ##22 ENSOKIG00005003545 SYT2 (ENSOKIG00005003554) mybphb (ENSOKIG00005003578) NAV1 (ENSOKIG00005003723) csrp1b (ENSOKIG00005005410) tnni1b (ENSOKIG00005005423) ENSOKIG00005005450 PKP1 (ENSOKIG00005005456) smpd2a (ENSOKIG00005005468) TEAD3 (ENSOKIG00005005515) ENSOKIG00005005644 ADORA3 (ENSOKIG00005005688) ENSOKIG00005005692 rplp2 (ENSOKIG00005005696) ENSOKIG00005005699 Rainbow trout MODERN SPECIES 28 ENSOMYG00000027831 ENSOMYG00000051471 ENSOMYG00000027883 ENSOMYG00000028035 il17rd (ENSOMYG00000028347) appl1 (ENSOMYG00000029294) rps23 (ENSOMYG00000030388) atp6ap1la (ENSOMYG00000030422) SNRPC (ENSOMYG00000030428) ENSOMYG00000072759 ilrun (ENSOMYG00000030435) SPDEF (ENSOMYG00000030457) pacsin1b (ENSOMYG00000030525) rps10 (ENSOMYG00000030562) nudt3b (ENSOMYG00000030583) ENSOMYG00000030638 ##22 ENSOMYG00000030686 ENSOMYG00000030692 ENSOMYG00000030699 ENSOMYG00000060994 mybphb (ENSOMYG00000030760) NAV1 (ENSOMYG00000031075) ENSOMYG00000059254 csrp1b (ENSOMYG00000032147) tnni1b (ENSOMYG00000032167) ENSOMYG00000032181 PKP1 (ENSOMYG00000032188) ENSOMYG00000072636 ENSOMYG00000032211 tead3b (ENSOMYG00000032250) ENSOMYG00000059435 Northern pike MODERN SPECIES 16 ENSELUG00000021424 tnni1b (ENSELUG00000021412) csrp1b (ENSELUG00000021388) NAV1 (ENSELUG00000021348) mybphb (ENSELUG00000021224) SYT2 (ENSELUG00000021160) ENSELUG00000021134 ENSELUG00000020468 snrpc (ENSELUG00000020489) ENSELUG00000031687 ilrun (ENSELUG00000020501) SPDEF (ENSELUG00000001273) pacsin1b (ENSELUG00000020536) rps10 (ENSELUG00000020573) nudt3b (ENSELUG00000020596) GRM4 (ENSELUG00000020642) ##22 igfn1.1 (ENSELUG00000020910) ENSELUG00000020961 ENSELUG00000021032 ENSELUG00000021091 ENSELUG00000023438 ENSELUG00000023455 ENSELUG00000023465 rplp2 (ENSELUG00000028982) KCNA10 (ENSELUG00000023484) KCNA2 (ENSELUG00000023489) KCNA3 (ENSELUG00000023494) ngfb (ENSELUG00000023507) tspan2a (ENSELUG00000023547) slc25a55a (ENSELUG00000023559) tshba (ENSELUG00000023564) Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Eupercaria ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Tetraodontidae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Fugu MODERN SPECIES 10 SLC2A1 (ENSTRUG00000002051) phc2b (ENSTRUG00000001888) ENSTRUG00000029988 ENSTRUG00000027483 ENSTRUG00000029626 ENSTRUG00000028103 snrpc (ENSTRUG00000031289) ilrun (ENSTRUG00000001482) SPDEF (ENSTRUG00000001430) pacsin1b (ENSTRUG00000001255) rps10 (ENSTRUG00000027066) ENSTRUG00000032660 nudt3 (ENSTRUG00000029707) ENSTRUG00000031695 ENSTRUG00000031554 ENSTRUG00000025395 ##22 igfn1.1 (ENSTRUG00000003182) ENSTRUG00000026564 ENSTRUG00000031787 ENSTRUG00000002032 ENSTRUG00000024211 ENSTRUG00000027741 SYT2 (ENSTRUG00000000406) ENSTRUG00000026836 mybphb (ENSTRUG00000000373) ENSTRUG00000027010 ENSTRUG00000030639 NAV1 (ENSTRUG00000002495) ENSTRUG00000029227 ENSTRUG00000002436 tp53rk (ENSTRUG00000032440) Percomorphaceae_D ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Carangaria ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 2 RAP1GAP (ENSCSEG00000016535) padi2 (ENSCSEG00000016500) LRIG2 (ENSCSEG00000016483) ENSCSEG00000016474 ENSCSEG00000016427 ENSCSEG00000016407 ENSCSEG00000016398 ENSCSEG00000016393 PLXNA2 (ENSCSEG00000016368) ENSCSEG00000016365 ora1 (ENSCSEG00000016362) phtf1 (ENSCSEG00000016352) PFKFB2 (ENSCSEG00000016333) yod1 (ENSCSEG00000016326) ENSCSEG00000016313 ENSCSEG00000016301 ##22 igfn1.1 (ENSCSEG00000016287) ENSCSEG00000016272 ENSCSEG00000016213 ENSCSEG00000016157 ENSCSEG00000016143 SYT2 (ENSCSEG00000016136) mybphb (ENSCSEG00000016121) NAV1 (ENSCSEG00000016086) csrp1b (ENSCSEG00000016075) KLHL10 (ENSCSEG00000016070) KLHL10 (ENSCSEG00000016064) tnni1b (ENSCSEG00000016059) ENSCSEG00000016050 PKP1 (ENSCSEG00000016044) smpd2a (ENSCSEG00000016030) Tongue sole MODERN SPECIES 2 ENSCSEG00000016427 ENSCSEG00000016474 LRIG2 (ENSCSEG00000016483) padi2 (ENSCSEG00000016500) RAP1GAP (ENSCSEG00000016535) SLC2A1 (ENSCSEG00000016675) phc2b (ENSCSEG00000016708) TCP11X1 (ENSCSEG00000016767) ENSCSEG00000016785 snrpc (ENSCSEG00000016845) ilrun (ENSCSEG00000016859) SPDEF (ENSCSEG00000016875) pacsin1b (ENSCSEG00000016896) rps10 (ENSCSEG00000016916) nudt3b (ENSCSEG00000016923) ENSCSEG00000016925 ##22 P3H1 (ENSCSEG00000016927) zgc:112255 (ENSCSEG00000016938) ap5b1 (ENSCSEG00000016947) nuf2 (ENSCSEG00000016956) CFAP57 (ENSCSEG00000016999) ENSCSEG00000017040 acad9 (ENSCSEG00000017056) IQSEC1 (ENSCSEG00000017123) ENSCSEG00000017146 ENSCSEG00000017156 hdac11 (ENSCSEG00000017168) ENSCSEG00000017181 ENSCSEG00000017230 setmar (ENSCSEG00000017235) USP48 (ENSCSEG00000017261) Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.g ##22 Salmoninae ANCESTRAL SPECIES 282 ENSGT00940000155308.c.ab ENSGT00950000182835.d.a.k.b.i ENSGT00940000154967.a.a.a.a ENSGT00940000153185.a.a.b.g ENSGT00390000017874.b.a ENSGT00940000155806.c.a.c ENSGT00600000084428.a.j ENSGT00730000110997.i.b ENSGT00490000043415.k.a.a ENSGT00940000157549.b.b ENSGT00950000182973.a.c.a.d.d ENSGT00440000034918.g.b.b ENSGT00940000157882.j.b ENSGT00940000157983.ab ENSGT00410000025882.b.c ENSGT01030000234648.a.b.a.a.a.g ##22 Huchen DUPLICATION Huchen MODERN SPECIES 8311 ENSHHUG00000005919 ##22 Huchen MODERN SPECIES 39 ENSHHUG00000024994 scube3 (ENSHHUG00000025002) ENSHHUG00000025188 C1orf116 (ENSHHUG00000025195) ENSHHUG00000025199 ANKS1A (ENSHHUG00000025208) BLTP3A (ENSHHUG00000025391) SNRPC (ENSHHUG00000025421) ilrun (ENSHHUG00000025433) SPDEF (ENSHHUG00000025441) pacsin1a (ENSHHUG00000025448) rps10 (ENSHHUG00000025460) nudt3a (ENSHHUG00000025548) ENSHHUG00000025561 ENSHHUG00000025566 ENSHHUG00000025572 ##22 Huchen MODERN SPECIES 1014 TECR (ENSHHUG00000050423) ENSHHUG00000050422 ENSHHUG00000050419 appl1 (ENSHHUG00000050224) ENSHHUG00000050212 rps23 (ENSHHUG00000050177) atp6ap1la (ENSHHUG00000050168) snrpc (ENSHHUG00000050158) ilrun (ENSHHUG00000050149) SPDEF (ENSHHUG00000050147) pacsin1b (ENSHHUG00000050095) rps10 (ENSHHUG00000050060) nudt3b (ENSHHUG00000050033) ENSHHUG00000050029 ##22 Sarcopterygii ANCESTRAL SPECIES 137 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918 ENSGT00940000154089.a ENSGT00940000157392 ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 Coelacanth MODERN SPECIES 248 KLHL12 (ENSLACG00000012003) ADIPOR1 (ENSLACG00000011871) cyb5r1 (ENSLACG00000011674) LMOD1 (ENSLACG00000011525) TIMM17A (ENSLACG00000011261) RNPEP (ENSLACG00000011104) ENSLACG00000011027 INAVA (ENSLACG00000010848) GPR25 (ENSLACG00000010503) zgc:195245 (ENSLACG00000010320) TMEM167B (ENSLACG00000022093) ENSLACG00000022461 NUDT3 (ENSLACG00000009589) ENSLACG00000009323 SMIM29 (ENSLACG00000009164) GRM4 (ENSLACG00000003503) ##22 Tetrapoda ANCESTRAL SPECIES 98 ENSGT00940000156676 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918 ENSGT00940000157882 ENSGT00410000025882.b ENSGT01030000234648.a.b.a.a.a ##22 Anura ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Frog MODERN SPECIES 2 ENSXETG00000049061 ENSXETG00000044068 ENSXETG00000043773 ENSXETG00000042679 ENSXETG00000044689 ENSXETG00000034900 ENSXETG00000044878 ENSXETG00000041675 ENSXETG00000044700 ENSXETG00000049083 ENSXETG00000049481 ENSXETG00000044626 ENSXETG00000045094 ENSXETG00000047951 ENSXETG00000042631 grm4 (ENSXETG00000006732) ##22 ENSXETG00000043082 ENSXETG00000044608 itpr3 (ENSXETG00000018719) ENSXETG00000044102 ENSXETG00000042168 ENSXETG00000049301 BAK1 (ENSXETG00000038338) ENSXETG00000044677 mybph (ENSXETG00000015370) ENSXETG00000044629 tbc1d22b (ENSXETG00000015365) brpf3 (ENSXETG00000033963) ENSXETG00000041926 ENSXETG00000042577 mapk13 (ENSXETG00000031922) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000002013 ENSLLEG00000002020 ENSLLEG00000002028 ENSLLEG00000002062 ENSLLEG00000002215 ENSLLEG00000002284 ENSLLEG00000002293 ENSLLEG00000002302 PARL (ENSLLEG00000002333) ENSLLEG00000002385 ENSLLEG00000002405 ENSLLEG00000002443 ENSLLEG00000002448 ENSLLEG00000002473 ENSLLEG00000002517 ENSLLEG00000002528 ##22 ENSLLEG00000002543 ENSLLEG00000002550 ENSLLEG00000002560 ENSLLEG00000002572 ENSLLEG00000002584 ENSLLEG00000002596 ENSLLEG00000002611 ENSLLEG00000002636 ENSLLEG00000002679 ENSLLEG00000002691 ENSLLEG00000002702 ENSLLEG00000002759 ENSLLEG00000002790 ENSLLEG00000002797 ILRUN (ENSLLEG00000002818) Amniota ANCESTRAL SPECIES 26 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700 Sauria ANCESTRAL SPECIES 24 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00470000042297 ENSGT00940000153835.a.a Lepidosauria ANCESTRAL SPECIES 56 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 tuatara MODERN SPECIES 645 ENSSPUG00000002320 ANKS1A (ENSSPUG00000002405) ENSSPUG00000002434 BLTP3A (ENSSPUG00000002450) SNRPC (ENSSPUG00000002502) ILRUN (ENSSPUG00000002512) SPDEF (ENSSPUG00000002521) PACSIN1 (ENSSPUG00000002540) RPS10 (ENSSPUG00000002562) NUDT3 (ENSSPUG00000002568) SMIM29 (ENSSPUG00000002577) HMGA1 (ENSSPUG00000002580) GRM4 (ENSSPUG00000002598) ##22 Episquamata ANCESTRAL SPECIES 1 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a ENSGT00940000169569 Laterata ANCESTRAL SPECIES 3 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a ENSGT00940000169569 Common wall lizard MODERN SPECIES 14 ENSPMRG00000013630 ENSPMRG00000013624 SCUBE3 (ENSPMRG00000013119) ENSPMRG00000013016 ENSPMRG00000012945 ANKS1A (ENSPMRG00000012513) BLTP3A (ENSPMRG00000012404) SNRPC (ENSPMRG00000012398) ILRUN (ENSPMRG00000012393) SPDEF (ENSPMRG00000012387) PACSIN1 (ENSPMRG00000012362) RPS10 (ENSPMRG00000012353) NUDT3 (ENSPMRG00000012347) SMIM29 (ENSPMRG00000012339) HMGA1 (ENSPMRG00000012333) GRM4 (ENSPMRG00000012324) ##22 ENSPMRG00000012313 MLN (ENSPMRG00000012308) LEMD2 (ENSPMRG00000012303) IP6K3 (ENSPMRG00000012298) UQCC2 (ENSPMRG00000012294) ITPR3 (ENSPMRG00000008140) ENSPMRG00000007310 BAK1 (ENSPMRG00000007303) TSPO2 (ENSPMRG00000007294) APOBEC2 (ENSPMRG00000007289) OARD1 (ENSPMRG00000007277) NFYA (ENSPMRG00000007262) ETV7 (ENSPMRG00000007255) KCTD20 (ENSPMRG00000007241) ENSPMRG00000007228 Argentine black and white tegu MODERN SPECIES 16 ZNF76 (ENSSMRG00000001933) SCUBE3 (ENSSMRG00000001879) ENSSMRG00000001082 ENSSMRG00000001079 ANKS1A (ENSSMRG00000001033) ENSSMRG00000000997 BLTP3A (ENSSMRG00000000949) SNRPC (ENSSMRG00000000931) ILRUN (ENSSMRG00000000912) SPDEF (ENSSMRG00000000860) PACSIN1 (ENSSMRG00000000840) RPS10 (ENSSMRG00000000829) NUDT3 (ENSSMRG00000000821) SMIM29 (ENSSMRG00000000816) ENSSMRG00000000807 GRM4 (ENSSMRG00000000779) ##22 ENSSMRG00000000044 ENSSMRG00000000018 LEMD2 (ENSSMRG00000023118) IP6K3 (ENSSMRG00000023117) UQCC2 (ENSSMRG00000023116) ITPR3 (ENSSMRG00000021174) BAK1 (ENSSMRG00000021028) TSPO2 (ENSSMRG00000021026) APOBEC2 (ENSSMRG00000021025) OARD1 (ENSSMRG00000021024) NFYA (ENSSMRG00000021023) ETV7 (ENSSMRG00000021020) KCTD20 (ENSSMRG00000021019) STK38 (ENSSMRG00000021018) ENSSMRG00000021017 Toxicofera ANCESTRAL SPECIES 1 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00960000190525 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a ENSGT00910000144115.a Lizard MODERN SPECIES 3 ENSACAG00000035209 ENSACAG00000040370 ENSACAG00000001834 ANKS1A (ENSACAG00000001592) ENSACAG00000001573 BLTP3A (ENSACAG00000001504) SNRPC (ENSACAG00000015721) ILRUN (ENSACAG00000015742) ENSACAG00000037538 SPDEF (ENSACAG00000015770) PACSIN1 (ENSACAG00000015801) ENSACAG00000015886 NUDT3 (ENSACAG00000028344) SMIM29 (ENSACAG00000024314) HMGA1 (ENSACAG00000015910) GRM4 (ENSACAG00000015953) ##22 ENSACAG00000042036 ENSACAG00000016044 ENSACAG00000036298 ENSACAG00000039763 ENSACAG00000045221 rh2 (ENSACAG00000016065) ENSACAG00000039336 MLN (ENSACAG00000022014) ENSACAG00000016140 IP6K3 (ENSACAG00000016147) UQCC2 (ENSACAG00000038971) ITPR3 (ENSACAG00000016163) ENSACAG00000045112 ENSACAG00000036976 BAK1 (ENSACAG00000016485) Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.h ##22 Elapidae_a ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a.h ##22 Blue-lipped sea krait MODERN SPECIES 5849 ENSLLTG00000008269 ##22 Elapidae ANCESTRAL SPECIES 1 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a.i ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a ENSGT00910000144115.a ENSGT00940000159918.a.b.a.a ENSGT00940000160379 Indian cobra MODERN SPECIES 2 DEF6 (ENSNNAG00000004512) ZNF76 (ENSNNAG00000004552) SCUBE3 (ENSNNAG00000004594) ENSNNAG00000004778 ANKS1A (ENSNNAG00000005133) ENSNNAG00000005382 BLTP3A (ENSNNAG00000005397) ENSNNAG00000005441 ILRUN (ENSNNAG00000005463) SPDEF (ENSNNAG00000005492) PACSIN1 (ENSNNAG00000005506) RPS10 (ENSNNAG00000005537) NUDT3 (ENSNNAG00000005555) SMIM29 (ENSNNAG00000005577) HMGA1 (ENSNNAG00000005594) GRM4 (ENSNNAG00000005621) ##22 MLN (ENSNNAG00000005751) LEMD2 (ENSNNAG00000005768) IP6K3 (ENSNNAG00000005795) UQCC2 (ENSNNAG00000005816) ITPR3 (ENSNNAG00000006068) APOBEC2 (ENSNNAG00000009562) OARD1 (ENSNNAG00000009595) NFYA (ENSNNAG00000009649) ETV7 (ENSNNAG00000009704) KCTD20 (ENSNNAG00000009750) STK38 (ENSNNAG00000009778) SRSF3 (ENSNNAG00000009830) CDKN1A (ENSNNAG00000009861) ENSNNAG00000009880 C6orf89 (ENSNNAG00000010010) Elapidae_a ANCESTRAL SPECIES 57 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a.i ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078.mb ENSGT01090000260100.A ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a.b ENSGT00960000191064 ENSGT00940000153544.a.a ENSGT00910000144115.a ENSGT00940000159918.a.b.a.a Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a.i ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078.mb ENSGT01090000260100.A ENSGT00940000156616 ENSGT00390000006988.d ENSGT00390000015714 ENSGT00940000162211 ENSGT00390000007975.b ENSGT00940000153544.a.a ENSGT00910000144115.a ENSGT00940000159918.a.b.a.a ENSGT00390000014270 ENSGT00950000185014 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 194 ENSPTXG00000011432 ##22 Eastern brown snake MODERN SPECIES 88 ENSPTXG00000019074 ##22 ENSPTXG00000019075 ENSPTXG00000019076 ENSPTXG00000019077 ENSPTXG00000019088 ENSPTXG00000019144 ENSPTXG00000019145 ENSPTXG00000019146 ENSPTXG00000019147 ENSPTXG00000019148 ENSPTXG00000019149 ENSPTXG00000019150 ENSPTXG00000019152 ENSPTXG00000019154 ENSPTXG00000019155 ENSPTXG00000019157 Mainland tiger snake MODERN SPECIES 131 DEF6 (ENSNSUG00000011906) ENSNSUG00000011907 SCUBE3 (ENSNSUG00000011908) ENSNSUG00000011909 ANKS1A (ENSNSUG00000011910) ENSNSUG00000011911 BLTP3A (ENSNSUG00000011912) SNRPC (ENSNSUG00000011913) ILRUN (ENSNSUG00000011914) SPDEF (ENSNSUG00000011915) PACSIN1 (ENSNSUG00000011916) RPS10 (ENSNSUG00000011918) NUDT3 (ENSNSUG00000011919) SMIM29 (ENSNSUG00000011920) HMGA1 (ENSNSUG00000011921) GRM4 (ENSNSUG00000011923) ##22 ENSNSUG00000011924 ENSNSUG00000011925 LEMD2 (ENSNSUG00000011926) IP6K3 (ENSNSUG00000011927) ENSNSUG00000011954 Blue-lipped sea krait MODERN SPECIES 1897 ENSLLTG00000012512 ##22 Archelosauria ANCESTRAL SPECIES 22 ENSGT00940000160911 ENSGT00390000008767.c.b ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00950000185061 ENSGT00470000042297 Cryptodira ANCESTRAL SPECIES 27 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00950000185061 ENSGT00940000153835.a.b ENSGT00470000042297 Testudinoidea ANCESTRAL SPECIES 22 ENSGT00940000160911.e ENSGT00390000008767.c.b ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.cb ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00950000185061.a.a ENSGT00950000185061.a.b.a ENSGT00940000153835.a.b Emydidae ANCESTRAL SPECIES 25 ENSGT00950000183017.b.b.a.b ENSGT00940000160911.e ENSGT00390000008767.c.a ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.bb ENSGT00940000157882 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00940000153835.a.a.c.c ENSGT00940000158700 ENSGT00940000160187.f Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 95 HMGA1 (ENSTMTG00000006160) ENSTMTG00000006048 ##22 ENSTMTG00000006002 ENSTMTG00000005966 ENSTMTG00000005946 ENSTMTG00000005933 ENSTMTG00000005741 ENSTMTG00000005658 ENSTMTG00000005633 ENSTMTG00000005607 ENSTMTG00000005591 ENSTMTG00000005553 ENSTMTG00000005539 ENSTMTG00000005463 MDFI (ENSTMTG00000005448) ENSTMTG00000005423 ENSTMTG00000005411 Three-toed box turtle MODERN SPECIES 94 ENSTMTG00000014285 ENSTMTG00000014223 ##22 ENSTMTG00000014196 MLN (ENSTMTG00000014180) ENSTMTG00000014169 ENSTMTG00000014142 ENSTMTG00000014127 UQCC2 (ENSTMTG00000014119) ENSTMTG00000013971 ENSTMTG00000013922 ENSTMTG00000013914 ENSTMTG00000013901 ENSTMTG00000013887 ENSTMTG00000013874 ENSTMTG00000013764 ENSTMTG00000013740 painted turtle MODERN SPECIES 914 TBC1D22B (ENSCPBG00000027169) ENSCPBG00000027167 SCUBE3 (ENSCPBG00000027165) ENSCPBG00000027163 ANKS1A (ENSCPBG00000027158) ENSCPBG00000027153 BLTP3A (ENSCPBG00000027144) SNRPC (ENSCPBG00000027142) ILRUN (ENSCPBG00000027140) SPDEF (ENSCPBG00000027138) PACSIN1 (ENSCPBG00000027137) ENSCPBG00000027135 ENSCPBG00000027133 GRM4 (ENSCPBG00000027131) ##22 ENSCPBG00000027130 ENSCPBG00000027128 Testudinidae ANCESTRAL SPECIES 26 ENSGT00940000160911.e ENSGT00390000008767.c.b ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.cb ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT01030000236145 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00950000185061.a.a ENSGT00950000185061.a.b.a ENSGT00940000153835.a.b Goode s thornscrub tortoise MODERN SPECIES 18 ENSGEVG00005001777 SCUBE3 (ENSGEVG00005001903) ENSGEVG00005002149 ANKS1A (ENSGEVG00005002406) ENSGEVG00005002812 BLTP3A (ENSGEVG00005002842) SNRPC (ENSGEVG00005002884) ILRUN (ENSGEVG00005002910) SPDEF (ENSGEVG00005002951) PACSIN1 (ENSGEVG00005002971) ENSGEVG00005002990 NUDT3 (ENSGEVG00005003006) ENSGEVG00005003018 SMIM29 (ENSGEVG00005003030) HMGA1 (ENSGEVG00005003047) GRM4 (ENSGEVG00005003070) ##22 ENSGEVG00005003101 ENSGEVG00005003110 ENSGEVG00005003122 LEMD2 (ENSGEVG00005003130) IP6K3 (ENSGEVG00005003153) UQCC2 (ENSGEVG00005003169) ITPR3 (ENSGEVG00005003357) BAK1 (ENSGEVG00005003511) TSPO2 (ENSGEVG00005003523) APOBEC2 (ENSGEVG00005003537) OARD1 (ENSGEVG00005003547) NFYA (ENSGEVG00005003561) ENSGEVG00005003574 ENSGEVG00005003594 ENSGEVG00005003622 Abingdon island giant tortoise MODERN SPECIES 221 GRM4 (ENSCABG00000009553) ##22 ENSCABG00000009456 ENSCABG00000009455 ENSCABG00000009454 LEMD2 (ENSCABG00000009453) IP6K3 (ENSCABG00000009449) UQCC2 (ENSCABG00000009447) ITPR3 (ENSCABG00000009445) BAK1 (ENSCABG00000009441) TSPO2 (ENSCABG00000009439) APOBEC2 (ENSCABG00000009438) OARD1 (ENSCABG00000009436) NFYA (ENSCABG00000009267) ENSCABG00000009257 ENSCABG00000009254 ENSCABG00000009250 Chinese turtle MODERN SPECIES 774 GRM4 (ENSPSIG00000014424) ##22 ENSPSIG00000014246 MLN (ENSPSIG00000014243) IP6K3 (ENSPSIG00000014194) ITPR3 (ENSPSIG00000013648) BAK1 (ENSPSIG00000013536) TSPO2 (ENSPSIG00000013531) APOBEC2 (ENSPSIG00000013480) OARD1 (ENSPSIG00000013464) NFYA (ENSPSIG00000013239) ENSPSIG00000012854 ENSPSIG00000012831 ENSPSIG00000012825 TREM2 (ENSPSIG00000012815) ENSPSIG00000012572 ENSPSIG00000001498 Archosauria ANCESTRAL SPECIES 23 ENSGT00940000160911 ENSGT00390000008767.c.b ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00950000185061 ENSGT00470000042297 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 37 CNTN6 (ENSCPRG00005015511) ENSCPRG00005015470 ENSCPRG00005015468 CNTN4 (ENSCPRG00005015455) IL5RA (ENSCPRG00005015437) TRNT1 (ENSCPRG00005015429) CRBN (ENSCPRG00005015422) LRRN1 (ENSCPRG00005015420) ENSCPRG00005015416 SUMF1 (ENSCPRG00005015401) ENSCPRG00005015393 ITPR1 (ENSCPRG00005013420) BHLHE40 (ENSCPRG00005013082) ARL8B (ENSCPRG00005013015) EDEM1 (ENSCPRG00005012826) ENSCPRG00005012786 ##22 GRM7 (ENSCPRG00005012779) ##22 ENSCPRG00005012767 LMCD1 (ENSCPRG00005012738) ENSCPRG00005012724 ENSCPRG00005012717 CAV3 (ENSCPRG00005012711) OXTR (ENSCPRG00005012696) RAD18 (ENSCPRG00005012686) SRGAP3 (ENSCPRG00005012679) THUMPD3 (ENSCPRG00005012665) ENSCPRG00005012662 IRAK2 (ENSCPRG00005012647) TATDN2 (ENSCPRG00005012643) GHRL (ENSCPRG00005012641) RPL32 (ENSCPRG00005012635) Australian saltwater crocodile MODERN SPECIES 53 ZNF76 (ENSCPRG00005014331) ENSCPRG00005014319 SCUBE3 (ENSCPRG00005014284) ENSCPRG00005014273 ANKS1A (ENSCPRG00005014190) ENSCPRG00005014174 BLTP3A (ENSCPRG00005014167) SNRPC (ENSCPRG00005014161) ILRUN (ENSCPRG00005014159) SPDEF (ENSCPRG00005014151) PACSIN1 (ENSCPRG00005014146) ENSCPRG00005014145 NUDT3 (ENSCPRG00005014140) SMIM29 (ENSCPRG00005014138) HMGA1 (ENSCPRG00005014137) ENSCPRG00005014124 ##22 MLN (ENSCPRG00005014118) LEMD2 (ENSCPRG00005014114) IP6K3 (ENSCPRG00005014108) UQCC2 (ENSCPRG00005014099) ITPR3 (ENSCPRG00005011760) BAK1 (ENSCPRG00005011519) UNC5CL (ENSCPRG00005011514) TSPO2 (ENSCPRG00005011511) APOBEC2 (ENSCPRG00005011503) OARD1 (ENSCPRG00005011499) NFYA (ENSCPRG00005011494) ENSCPRG00005011472 ENSCPRG00005011470 TREM2 (ENSCPRG00005011466) ENSCPRG00005011462 Aves ANCESTRAL SPECIES 25 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000153835.a.b ENSGT00950000185061 ENSGT00470000042297 ENSGT00940000153835.a.a African ostrich MODERN SPECIES 505 FANCE (ENSSCUG00000006023) ENSSCUG00000006021 PPARD (ENSSCUG00000006020) ZNF76 (ENSSCUG00000006018) RPL10A (ENSSCUG00000006016) ENSSCUG00000006009 ANKS1A (ENSSCUG00000006006) ENSSCUG00000005990 BLTP3A (ENSSCUG00000005976) ENSSCUG00000005973 ILRUN (ENSSCUG00000005972) PACSIN1 (ENSSCUG00000005970) RPS10 (ENSSCUG00000005968) NUDT3 (ENSSCUG00000005966) GRM4 (ENSSCUG00000005965) ##22 ENSSCUG00000005961 ENSSCUG00000005959 IP6K3 (ENSSCUG00000005956) ENSSCUG00000005955 ITPR3 (ENSSCUG00000005311) BAK1 (ENSSCUG00000005012) APOBEC2 (ENSSCUG00000005011) OARD1 (ENSSCUG00000005008) NFYA (ENSSCUG00000005007) TREM2 (ENSSCUG00000005005) ENSSCUG00000005003 Neognathae ANCESTRAL SPECIES 24 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000153835.a.b ENSGT00950000185061 ENSGT00470000042297 ENSGT00940000153835.a.a Neognathae_b ANCESTRAL SPECIES 24 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700 ENSGT00940000160187 Neognathae_c ANCESTRAL SPECIES 27 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00980000202402 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 Golden eagle MODERN SPECIES 16 ZNF76 (ENSACCG00020014824) RPL10A (ENSACCG00020014808) SCUBE3 (ENSACCG00020014785) ENSACCG00020014760 ANKS1A (ENSACCG00020014223) ENSACCG00020013787 BLTP3A (ENSACCG00020013757) SNRPC (ENSACCG00020013719) ILRUN (ENSACCG00020013698) SPDEF (ENSACCG00020013661) PACSIN1 (ENSACCG00020013637) RPS10 (ENSACCG00020013618) NUDT3 (ENSACCG00020013597) ENSACCG00020013578 HMGA1 (ENSACCG00020013561) GRM4 (ENSACCG00020013536) ##22 ENSACCG00020013519 ENSACCG00020013499 LEMD2 (ENSACCG00020013479) IP6K3 (ENSACCG00020013460) UQCC2 (ENSACCG00020013440) ITPR3 (ENSACCG00020013187) BAK1 (ENSACCG00020012707) TSPO2 (ENSACCG00020012685) APOBEC2 (ENSACCG00020012676) OARD1 (ENSACCG00020012645) NFYA (ENSACCG00020012588) TREM2 (ENSACCG00020012540) ENSACCG00020012512 FOXP4 (ENSACCG00020012478) MDFI (ENSACCG00020012448) Kakapo MODERN SPECIES 30 ST7L (ENSSHBG00005014637) WNT2B (ENSSHBG00005014626) CTTNBP2NL (ENSSHBG00005014616) KCND3 (ENSSHBG00005014608) DDX20 (ENSSHBG00005014590) INKA2 (ENSSHBG00005014581) ENSSHBG00005014571 ENSSHBG00005014557 SNRPC (ENSSHBG00005014545) ILRUN (ENSSHBG00005014536) SPDEF (ENSSHBG00005014525) PACSIN1 (ENSSHBG00005014517) RPS10 (ENSSHBG00005014508) SMIM29 (ENSSHBG00005014502) NUDT3 (ENSSHBG00005014490) GRM4 (ENSSHBG00005014485) ##22 ENSSHBG00005014478 LEMD2 (ENSSHBG00005014246) IP6K3 (ENSSHBG00005014223) UQCC2 (ENSSHBG00005014215) ITPR3 (ENSSHBG00005014174) BAK1 (ENSSHBG00005014138) TSPO2 (ENSSHBG00005014125) APOBEC2 (ENSSHBG00005014113) OARD1 (ENSSHBG00005014103) NFYA (ENSSHBG00005014091) TREM2 (ENSSHBG00005014084) ENSSHBG00005014070 ENSSHBG00005014059 FOXP4 (ENSSHBG00005013805) MDFI (ENSSHBG00005013778) Passeriformes ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700 ENSGT00940000160187 Great tit MODERN SPECIES 19 ENSPMJG00000012388 ENSPMJG00000012389 RPL10A (ENSPMJG00000012390) SCUBE3 (ENSPMJG00000012391) ANKS1A (ENSPMJG00000012513) ENSPMJG00000012514 BLTP3A (ENSPMJG00000012515) SNRPC (ENSPMJG00000012516) ILRUN (ENSPMJG00000012517) RPS10 (ENSPMJG00000012519) SPDEF (ENSPMJG00000012520) PACSIN1 (ENSPMJG00000012521) NUDT3 (ENSPMJG00000012522) SMIM29 (ENSPMJG00000012523) HMGA1 (ENSPMJG00000012524) GRM4 (ENSPMJG00000012525) ##22 ENSPMJG00000012526 ENSPMJG00000012527 LEMD2 (ENSPMJG00000012528) IP6K3 (ENSPMJG00000012529) UQCC2 (ENSPMJG00000012530) ITPR3 (ENSPMJG00000012531) ENSPMJG00000016246 BAK1 (ENSPMJG00000016247) APOBEC2 (ENSPMJG00000016248) OARD1 (ENSPMJG00000016249) NFYA (ENSPMJG00000016250) TREM2 (ENSPMJG00000016251) ENSPMJG00000016252 ENSPMJG00000016253 FOXP4 (ENSPMJG00000016256) Passeriformes_d ANCESTRAL SPECIES 21 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00980000202402 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887.j ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700.n ENSGT00940000160187 Passeriformes_g ANCESTRAL SPECIES 24 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00980000202402 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887.j ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT01000000215036 ENSGT00940000158700.n Medium ground finch MODERN SPECIES 215 PPARD (ENSGFOG00000009620) DEF6 (ENSGFOG00000009628) ENSGFOG00000009636 ZNF76 (ENSGFOG00000009638) ENSGFOG00000009644 RPL10A (ENSGFOG00000009647) SCUBE3 (ENSGFOG00000009691) ANKS1A (ENSGFOG00000010716) BLTP3A (ENSGFOG00000012052) SNRPC (ENSGFOG00000012057) ILRUN (ENSGFOG00000012059) PACSIN1 (ENSGFOG00000012062) ENSGFOG00000012068 NUDT3 (ENSGFOG00000012072) ENSGFOG00000012076 GRM4 (ENSGFOG00000012082) ##22 ENSGFOG00000012087 ENSGFOG00000012092 LEMD2 (ENSGFOG00000012096) IP6K3 (ENSGFOG00000012101) ITPR3 (ENSGFOG00000012137) BAK1 (ENSGFOG00000012443) TSPO2 (ENSGFOG00000012449) APOBEC2 (ENSGFOG00000012466) OARD1 (ENSGFOG00000012469) NFYA (ENSGFOG00000012476) ENSGFOG00000012479 ENSGFOG00000012484 ENSGFOG00000012486 FOXP4 (ENSGFOG00000012493) MDFI (ENSGFOG00000012504) Passeroidea ANCESTRAL SPECIES 24 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00980000202402 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887.j ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042297 ENSGT00940000153835.a.a ENSGT00940000158700.n ENSGT00940000160187 Common canary MODERN SPECIES 62 ZNF76 (ENSSCAG00000015828) RPL10A (ENSSCAG00000015835) ENSSCAG00000015837 SCUBE3 (ENSSCAG00000015844) ANKS1A (ENSSCAG00000015899) ENSSCAG00000015962 BLTP3A (ENSSCAG00000015969) SNRPC (ENSSCAG00000015974) ILRUN (ENSSCAG00000015976) SPDEF (ENSSCAG00000015977) PACSIN1 (ENSSCAG00000015981) RPS10 (ENSSCAG00000015987) NUDT3 (ENSSCAG00000015988) ENSSCAG00000015990 HMGA1 (ENSSCAG00000015991) GRM4 (ENSSCAG00000015992) ##22 ENSSCAG00000015998 MLN (ENSSCAG00000016010) LEMD2 (ENSSCAG00000016012) IP6K3 (ENSSCAG00000016016) UQCC2 (ENSSCAG00000016021) ITPR3 (ENSSCAG00000016393) BAK1 (ENSSCAG00000016887) TSPO2 (ENSSCAG00000016888) APOBEC2 (ENSSCAG00000016889) OARD1 (ENSSCAG00000016891) NFYA (ENSSCAG00000016893) TREM2 (ENSSCAG00000016895) ENSSCAG00000016897 FOXP4 (ENSSCAG00000000094) ENSSCAG00000000104 Zebra finch MODERN SPECIES 19 PPARD (ENSTGUG00000001735) DEF6 (ENSTGUG00000001738) ZNF76 (ENSTGUG00000001745) RPL10A (ENSTGUG00000001749) SCUBE3 (ENSTGUG00000001750) ANKS1A (ENSTGUG00000001756) TAF11 (ENSTGUG00000001766) BLTP3A (ENSTGUG00000001768) SNRPC (ENSTGUG00000001773) ILRUN (ENSTGUG00000001777) PACSIN1 (ENSTGUG00000013694) SPDEF (ENSTGUG00000001781) RPS10 (ENSTGUG00000001782) NUDT3 (ENSTGUG00000025458) ENSTGUG00000022185 GRM4 (ENSTGUG00000021157) ##22 ENSTGUG00000001791 ENSTGUG00000026122 LEMD2 (ENSTGUG00000001795) IP6K3 (ENSTGUG00000019985) UQCC2 (ENSTGUG00000001797) ITPR3 (ENSTGUG00000001798) TSPO2 (ENSTGUG00000021855) APOBEC2 (ENSTGUG00000018533) OARD1 (ENSTGUG00000001830) NFYA (ENSTGUG00000001832) TREM2 (ENSTGUG00000001835) ENSTGUG00000024731 ENSTGUG00000001836 FOXP4 (ENSTGUG00000001837) TFEB (ENSTGUG00000024407) Flycatcher DUPLICATION Flycatcher MODERN SPECIES 18 DEF6 (ENSFALG00000003694) ZNF76 (ENSFALG00000003698) ENSFALG00000003701 SCUBE3 (ENSFALG00000003706) ANKS1A (ENSFALG00000003711) ENSFALG00000024921 BLTP3A (ENSFALG00000003722) ENSFALG00000028356 ILRUN (ENSFALG00000023018) SPDEF (ENSFALG00000027495) PACSIN1 (ENSFALG00000003773) RPS10 (ENSFALG00000025571) NUDT3 (ENSFALG00000003788) ENSFALG00000028104 HMGA1 (ENSFALG00000003795) ENSFALG00000026051 ##22 ENSFALG00000025014 ENSFALG00000003816 ##22 ENSFALG00000003843 ENSFALG00000003856 LEMD2 (ENSFALG00000003858) IP6K3 (ENSFALG00000003865) ENSFALG00000025988 ITPR3 (ENSFALG00000003884) BAK1 (ENSFALG00000003897) ENSFALG00000003903 ENSFALG00000023379 ENSFALG00000003916 CCND3 (ENSFALG00000002849) BYSL (ENSFALG00000026746) MED20 (ENSFALG00000002933) Flycatcher MODERN SPECIES 18 ENSFALG00000003701 SCUBE3 (ENSFALG00000003706) ANKS1A (ENSFALG00000003711) ENSFALG00000024921 BLTP3A (ENSFALG00000003722) ENSFALG00000028356 ILRUN (ENSFALG00000023018) SPDEF (ENSFALG00000027495) PACSIN1 (ENSFALG00000003773) RPS10 (ENSFALG00000025571) NUDT3 (ENSFALG00000003788) ENSFALG00000028104 HMGA1 (ENSFALG00000003795) ENSFALG00000026051 ##22 ENSFALG00000025014 ENSFALG00000003816 ##22 ENSFALG00000003843 ENSFALG00000003856 LEMD2 (ENSFALG00000003858) IP6K3 (ENSFALG00000003865) ENSFALG00000025988 ITPR3 (ENSFALG00000003884) BAK1 (ENSFALG00000003897) ENSFALG00000003903 ENSFALG00000023379 ENSFALG00000003916 CCND3 (ENSFALG00000002849) BYSL (ENSFALG00000026746) MED20 (ENSFALG00000002933) USP49 (ENSFALG00000002945) ENSFALG00000028135 Galloanserae ANCESTRAL SPECIES 28 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000153835.a.b ENSGT00950000185061 ENSGT00470000042297 ENSGT00940000153835.a.a Phasianidae ANCESTRAL SPECIES 22 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000153835.a.b ENSGT00940000153835.b ENSGT00940000153835.a.a ENSGT00940000158700 Japanese quail MODERN SPECIES 18 PPARD (ENSCJPG00005017795) DEF6 (ENSCJPG00005017796) ENSCJPG00005017797 RPL10A (ENSCJPG00005017798) SCUBE3 (ENSCJPG00005017799) ANKS1A (ENSCJPG00005017800) ENSCJPG00005017861 BLTP3A (ENSCJPG00005017862) ILRUN (ENSCJPG00005017896) SPDEF (ENSCJPG00005017897) PACSIN1 (ENSCJPG00005017903) RPS10 (ENSCJPG00005017946) NUDT3 (ENSCJPG00005017947) SMIM29 (ENSCJPG00005017948) ENSCJPG00005017949 GRM4 (ENSCJPG00005017950) ##22 ENSCJPG00005018003 MLN (ENSCJPG00005018006) LEMD2 (ENSCJPG00005018007) IP6K3 (ENSCJPG00005018008) UQCC2 (ENSCJPG00005018009) ITPR3 (ENSCJPG00005018010) BAK1 (ENSCJPG00005018929) TSPO2 (ENSCJPG00005018930) APOBEC2 (ENSCJPG00005018931) OARD1 (ENSCJPG00005018932) NFYA (ENSCJPG00005018933) ENSCJPG00005018934 ENSCJPG00005018935 ENSCJPG00005018936 FOXP4 (ENSCJPG00005018938) Phasianidae_b ANCESTRAL SPECIES 22 ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792.d ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000153835.a.b ENSGT00940000153835.b ENSGT00940000153835.a.a ENSGT00940000158700 Chicken MODERN SPECIES 18 ZNF76 (ENSGALG00010025887) RPL10A (ENSGALG00010025904) SCUBE3 (ENSGALG00010025917) ENSGALG00010025941 ANKS1A (ENSGALG00010026001) TAF11 (ENSGALG00010026051) BLTP3A (ENSGALG00010026068) SNRPC (ENSGALG00010026088) C6orf106 (ENSGALG00010026094) SPDEF (ENSGALG00010026109) PACSIN1 (ENSGALG00010026124) RPS10 (ENSGALG00010026148) NUDT3 (ENSGALG00010026184) SMIM29 (ENSGALG00010026192) HMGA1 (ENSGALG00010026300) GRM4 (ENSGALG00010024446) ##22 OPN1MSW (ENSGALG00010027226) MLN (ENSGALG00010027373) LEMD2 (ENSGALG00010027260) IP6K3 (ENSGALG00010027265) C26H6ORF125 (ENSGALG00010027579) ITPR3 (ENSGALG00010027594) ENSGALG00010027604 BAK1 (ENSGALG00010027612) TSPO2 (ENSGALG00010027621) APOBEC2 (ENSGALG00010027623) OARD1 (ENSGALG00010027627) NFYA (ENSGALG00010027648) TREMB1 (ENSGALG00010027664) TREM2 (ENSGALG00010027674) TREMB2 (ENSGALG00010027695) Turkey DUPLICATION Turkey MODERN SPECIES 20 ENSMGAG00000017990 ENSMGAG00000010137 ENSMGAG00000020405 ENSMGAG00000010124 ENSMGAG00000010140 ENSMGAG00000010170 ENSMGAG00000009782 ENSMGAG00000010175 ENSMGAG00000020491 LEMD2 (ENSMGAG00000005990) ENSMGAG00000009872 UQCC2 (ENSMGAG00000018544) ENSMGAG00000009787 ENSMGAG00000006145 ENSMGAG00000019397 ENSMGAG00000006072 ##22 ENSMGAG00000018879 ##22 ENSMGAG00000002804 ENSMGAG00000002783 ENSMGAG00000002756 ENSMGAG00000002725 ENSMGAG00000002732 ILRUN (ENSMGAG00000006067) ENSMGAG00000006054 ENSMGAG00000005996 ENSMGAG00000006015 ENSMGAG00000005929 ENSMGAG00000020028 ENSMGAG00000018669 ENSMGAG00000005909 ENSMGAG00000019502 Turkey MODERN SPECIES 20 ENSMGAG00000010137 ENSMGAG00000020405 ENSMGAG00000010124 ENSMGAG00000010140 ENSMGAG00000010170 ENSMGAG00000009782 ENSMGAG00000010175 ENSMGAG00000020491 LEMD2 (ENSMGAG00000005990) ENSMGAG00000009872 UQCC2 (ENSMGAG00000018544) ENSMGAG00000009787 ENSMGAG00000006145 ENSMGAG00000019397 ENSMGAG00000006072 ##22 ENSMGAG00000018879 ##22 ENSMGAG00000002804 ENSMGAG00000002783 ENSMGAG00000002756 ENSMGAG00000002725 ENSMGAG00000002732 ILRUN (ENSMGAG00000006067) ENSMGAG00000006054 ENSMGAG00000005996 ENSMGAG00000006015 ENSMGAG00000005929 ENSMGAG00000020028 ENSMGAG00000018669 ENSMGAG00000005909 ENSMGAG00000019502 ENSMGAG00000005706 Anatidae ANCESTRAL SPECIES 38 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00390000008767.d ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT01030000235038 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT01030000234549.a.a.a.a.a.b.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887.g ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00950000183117.a.b ENSGT01030000234578.B.b ENSGT00390000017353 ENSGT00940000165883 Pink-footed goose MODERN SPECIES 237 DEF6 (ENSABRG00000013347) ZNF76 (ENSABRG00000013332) RPL10A (ENSABRG00000013328) SCUBE3 (ENSABRG00000012752) ENSABRG00000012693 ANKS1A (ENSABRG00000011633) ENSABRG00000011563 BLTP3A (ENSABRG00000011558) ENSABRG00000011549 ILRUN (ENSABRG00000011537) SPDEF (ENSABRG00000011532) PACSIN1 (ENSABRG00000011521) RPS10 (ENSABRG00000011511) NUDT3 (ENSABRG00000011504) ENSABRG00000011498 GRM4 (ENSABRG00000011490) ##22 ENSABRG00000011362 MLN (ENSABRG00000011350) LEMD2 (ENSABRG00000011346) IP6K3 (ENSABRG00000011341) UQCC2 (ENSABRG00000011317) ITPR3 (ENSABRG00000011227) BAK1 (ENSABRG00000011204) TSPO2 (ENSABRG00000011186) APOBEC2 (ENSABRG00000011171) OARD1 (ENSABRG00000011155) NFYA (ENSABRG00000011138) CEPT1 (ENSABRG00000011119) DRAM2 (ENSABRG00000011112) LRIF1 (ENSABRG00000011108) ENSABRG00000011096 Duck DUPLICATION Duck MODERN SPECIES 21 MAS1 (ENSAPLG00000000729) PNLDC1 (ENSAPLG00000007014) MRPL18 (ENSAPLG00000006870) TCP1 (ENSAPLG00000006259) ACAT2 (ENSAPLG00000006048) WTAP (ENSAPLG00000024378) #23 SOD2 (ENSAPLG00000005614) ENSAPLG00000005370 STX11 (ENSAPLG00000000719) ENSAPLG00000021478 ENSAPLG00000004522 EPM2A (ENSAPLG00000027607) FBXO30 (ENSAPLG00000014234) SHPRH (ENSAPLG00000014248) ENSAPLG00000026243 ENSAPLG00000014495 ##22 RAB32 (ENSAPLG00000029671) ENSAPLG00000028353 STXBP5 (ENSAPLG00000014903) SAMD5 (ENSAPLG00000016694) ENSAPLG00000022887 SASH1 (ENSAPLG00000007750) UST (ENSAPLG00000008044) TAB2 (ENSAPLG00000008173) ZC3H12D (ENSAPLG00000008379) PPIL4 (ENSAPLG00000008437) GINM1 (ENSAPLG00000008777) KATNA1 (ENSAPLG00000008891) LATS1 (ENSAPLG00000009385) NUP43 (ENSAPLG00000028569) PCMT1 (ENSAPLG00000009762) Duck MODERN SPECIES 18 ENSAPLG00000030874 GOLT1A (ENSAPLG00000027994) REN (ENSAPLG00000012376) ETNK2 (ENSAPLG00000012663) SOX13 (ENSAPLG00000016687) ENSAPLG00000006673 ENSAPLG00000023437 ANKS1A (ENSAPLG00000006934) BLTP3A (ENSAPLG00000007589) SNRPC (ENSAPLG00000023212) ILRUN (ENSAPLG00000019995) SPDEF (ENSAPLG00000017680) PACSIN1 (ENSAPLG00000008350) RPS10 (ENSAPLG00000008728) NUDT3 (ENSAPLG00000026621) ENSAPLG00000005514 ##22 ENSAPLG00000005325 LEMD2 (ENSAPLG00000028691) ITPR3 (ENSAPLG00000003078) BAK1 (ENSAPLG00000003058) TSPO2 (ENSAPLG00000002897) APOBEC2 (ENSAPLG00000002895) OARD1 (ENSAPLG00000002869) NFYA (ENSAPLG00000002694) DRAM2 (ENSAPLG00000001918) CEPT1 (ENSAPLG00000002219) LRIF1 (ENSAPLG00000001746) ENSAPLG00000016298 UBE2T (ENSAPLG00000016278) ENSAPLG00000016240 ADIPOR1 (ENSAPLG00000016148) Mammalia ANCESTRAL SPECIES 41 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00940000164212 ENSGT00470000042300 ENSGT00940000153835.b ENSGT00940000153835.a.a Platypus MODERN SPECIES 18 LHFPL5 (ENSOANG00000046683) CLPS (ENSOANG00000048366) ENSOANG00000007040 ENSOANG00000008792 ANKS1A (ENSOANG00000038289) ENSOANG00000013388 BLTP3A (ENSOANG00000049312) SNRPC (ENSOANG00000003405) ILRUN (ENSOANG00000005979) SPDEF (ENSOANG00000050028) PACSIN1 (ENSOANG00000041042) RPS10 (ENSOANG00000012677) NUDT3 (ENSOANG00000000127) SMIM29 (ENSOANG00000044876) HMGA1 (ENSOANG00000032894) GRM4 (ENSOANG00000008364) ##22 MLN (ENSOANG00000021641) ENSOANG00000036925 IP6K3 (ENSOANG00000011263) UQCC2 (ENSOANG00000047713) ITPR3 (ENSOANG00000011265) ENSOANG00000040572 UNC5CL (ENSOANG00000037471) APOBEC2 (ENSOANG00000046384) ENSOANG00000042689 NFYA (ENSOANG00000044490) ENSOANG00000013646 ENSOANG00000011496 ENSOANG00000014169 ENSOANG00000048521 SCUBE3 (ENSOANG00000009784) Theria ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228 ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Marsupialia ANCESTRAL SPECIES 2 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228.d.a.b ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Opossum MODERN SPECIES 1 ZNF76 (ENSMODG00000013806) SCUBE3 (ENSMODG00000013831) ENSMODG00000027808 ENSMODG00000013839 ANKS1A (ENSMODG00000013855) TAF11 (ENSMODG00000051190) BLTP3A (ENSMODG00000013895) ENSMODG00000013904 ILRUN (ENSMODG00000013910) SPDEF (ENSMODG00000013916) ENSMODG00000049383 RPS10 (ENSMODG00000013929) NUDT3 (ENSMODG00000048086) SMIM29 (ENSMODG00000013938) ENSMODG00000013940 GRM4 (ENSMODG00000013970) ##22 ENSMODG00000027450 ENSMODG00000013983 ENSMODG00000048209 ENSMODG00000013987 IP6K3 (ENSMODG00000013993) UQCC2 (ENSMODG00000013996) ITPR3 (ENSMODG00000014069) ENSMODG00000014083 BAK1 (ENSMODG00000014089) ZBTB9 (ENSMODG00000014092) SYNGAP1 (ENSMODG00000014104) ENSMODG00000025679 PHF1 (ENSMODG00000014121) ENSMODG00000014132 SMIM40 (ENSMODG00000041725) Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228.d.a.b ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Diprotodontia ANCESTRAL SPECIES 44 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228.c ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Diprotodontia_a ANCESTRAL SPECIES 49 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000160792 ENSGT00940000155806 ENSGT00390000013228.c ENSGT00600000084428.a ENSGT00730000110997 ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Common wonbat MODERN SPECIES 1047 PPARD (ENSVURG00010018918) DEF6 (ENSVURG00010018912) ZNF76 (ENSVURG00010018901) ENSVURG00010018893 ENSVURG00010018884 ENSVURG00010018877 ANKS1A (ENSVURG00010016789) BLTP3A (ENSVURG00010016640) SNRPC (ENSVURG00010016613) ILRUN (ENSVURG00010016604) SPDEF (ENSVURG00010016586) PACSIN1 (ENSVURG00010016428) ENSVURG00010016405 NUDT3 (ENSVURG00010016394) SMIM29 (ENSVURG00010016385) GRM4 (ENSVURG00010016218) ##22 MLN (ENSVURG00010016193) ENSVURG00010016182 IP6K3 (ENSVURG00010016173) ENSVURG00010016152 ITPR3 (ENSVURG00010016061) ENSVURG00010016031 BAK1 (ENSVURG00010016019) SYNGAP1 (ENSVURG00010015312) CUTA (ENSVURG00010015262) PHF1 (ENSVURG00010015194) ENSVURG00010015167 SMIM40 (ENSVURG00010015158) DAXX (ENSVURG00010015143) ZBTB22 (ENSVURG00010015135) ENSVURG00010015107 koala MODERN SPECIES 76 ZNF76 (ENSPCIG00000021233) SCUBE3 (ENSPCIG00000003800) ENSPCIG00000012637 ENSPCIG00000006331 ANKS1A (ENSPCIG00000006345) ENSPCIG00000006365 BLTP3A (ENSPCIG00000006367) SNRPC (ENSPCIG00000033609) ILRUN (ENSPCIG00000006371) SPDEF (ENSPCIG00000006374) PACSIN1 (ENSPCIG00000006379) ENSPCIG00000026597 NUDT3 (ENSPCIG00000034631) ENSPCIG00000024361 HMGA1 (ENSPCIG00000024362) GRM4 (ENSPCIG00000036938) ##22 MLN (ENSPCIG00000012512) LEMD2 (ENSPCIG00000012513) IP6K3 (ENSPCIG00000024478) ENSPCIG00000035005 ITPR3 (ENSPCIG00000016569) ENSPCIG00000014453 BAK1 (ENSPCIG00000035728) ZBTB9 (ENSPCIG00000030149) SYNGAP1 (ENSPCIG00000030140) CUTA (ENSPCIG00000030134) PHF1 (ENSPCIG00000030129) ENSPCIG00000030126 SMIM40 (ENSPCIG00000030125) DAXX (ENSPCIG00000030119) ZBTB22 (ENSPCIG00000030117) Wallaby MODERN SPECIES 3193 GRM4 (ENSMEUG00000013535) ##22 Tasmanian devil MODERN SPECIES 3 PPARD (ENSSHAG00000027880) ENSSHAG00000010104 SCUBE3 (ENSSHAG00000009564) ENSSHAG00000007929 ANKS1A (ENSSHAG00000006146) ENSSHAG00000004697 BLTP3A (ENSSHAG00000003291) ENSSHAG00000000945 ILRUN (ENSSHAG00000031640) SPDEF (ENSSHAG00000004899) PACSIN1 (ENSSHAG00000029937) RPS10 (ENSSHAG00000000731) NUDT3 (ENSSHAG00000023017) SMIM29 (ENSSHAG00000021864) ENSSHAG00000026467 GRM4 (ENSSHAG00000026932) ##22 MLN (ENSSHAG00000031254) ENSSHAG00000028642 IP6K3 (ENSSHAG00000007830) UQCC2 (ENSSHAG00000007481) ITPR3 (ENSSHAG00000006269) ENSSHAG00000005349 BAK1 (ENSSHAG00000028586) ZBTB9 (ENSSHAG00000027893) SYNGAP1 (ENSSHAG00000002507) CUTA (ENSSHAG00000002227) ENSSHAG00000001198 PHF1 (ENSSHAG00000021541) DAXX (ENSSHAG00000007459) ZBTB22 (ENSSHAG00000007426) TAPBP (ENSSHAG00000025584) Eutheria ANCESTRAL SPECIES 9 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT01050000247851 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 ENSGT00390000010512 Xenarthra ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Armadillo MODERN SPECIES 2472 GRM4 (ENSDNOG00000045454) ##22 Afrotheria ANCESTRAL SPECIES 83 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT01050000247851 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00520000061205 ENSGT00520000057851 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00390000009448 ENSGT00940000160991 Tenrec MODERN SPECIES 2310 GRM4 (ENSETEG00000007981) ##22 Afrotheria_a ANCESTRAL SPECIES 84 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT01050000247851 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 ENSGT00390000010512 Hyrax MODERN SPECIES 1873 GRM4 (ENSPCAG00000002501) ##22 Elephant MODERN SPECIES 14 PPARD (ENSLAFG00000017670) DEF6 (ENSLAFG00000007975) ZNF76 (ENSLAFG00000026071) SCUBE3 (ENSLAFG00000007965) TCP11 (ENSLAFG00000011497) ANKS1A (ENSLAFG00000011487) TAF11 (ENSLAFG00000011482) BLTP3A (ENSLAFG00000032745) SNRPC (ENSLAFG00000013534) ILRUN (ENSLAFG00000015230) SPDEF (ENSLAFG00000002253) PACSIN1 (ENSLAFG00000006319) RPS10 (ENSLAFG00000008539) NUDT3 (ENSLAFG00000008940) HMGA1 (ENSLAFG00000028445) GRM4 (ENSLAFG00000026679) ##22 MLN (ENSLAFG00000012163) LEMD2 (ENSLAFG00000012159) IP6K3 (ENSLAFG00000012157) UQCC2 (ENSLAFG00000008206) ITPR3 (ENSLAFG00000022216) ENSLAFG00000001449 BAK1 (ENSLAFG00000001446) ZBTB9 (ENSLAFG00000020986) SYNGAP1 (ENSLAFG00000007848) CUTA (ENSLAFG00000005876) PHF1 (ENSLAFG00000005870) DAXX (ENSLAFG00000027595) ZBTB22 (ENSLAFG00000018510) TAPBP (ENSLAFG00000032520) RGL2 (ENSLAFG00000022913) Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00730000110997.k.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00730000110997.k.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Glires ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Rodentia ANCESTRAL SPECIES 6 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Myomorpha ANCESTRAL SPECIES 11 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Muroidea ANCESTRAL SPECIES 15 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Cricetidae ANCESTRAL SPECIES 9 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Cricetinae ANCESTRAL SPECIES 24 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000164565 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Golden Hamster MODERN SPECIES 794 Def6 (ENSMAUG00000012255) Zfp523 (ENSMAUG00000001011) Scube3 (ENSMAUG00000008838) ENSMAUG00000020125 ENSMAUG00000013869 Anks1 (ENSMAUG00000007655) Taf11 (ENSMAUG00000012684) Uhrf1bp1 (ENSMAUG00000001812) Ilrun (ENSMAUG00000020257) Spdef (ENSMAUG00000007348) Pacsin1 (ENSMAUG00000014331) Rps10 (ENSMAUG00000010407) Nudt3 (ENSMAUG00000009585) Smim29 (ENSMAUG00000014272) ENSMAUG00000012619 Grm4 (ENSMAUG00000014425) ##22 Lemd2 (ENSMAUG00000008930) Ip6k3 (ENSMAUG00000007919) ENSMAUG00000015225 Itpr3 (ENSMAUG00000019945) Ggnbp1 (ENSMAUG00000020283) Bak1 (ENSMAUG00000018236) Zbtb9 (ENSMAUG00000014578) Syngap1 (ENSMAUG00000021307) Cuta (ENSMAUG00000016276) Phf1 (ENSMAUG00000002043) ENSMAUG00000021378 ENSMAUG00000019318 Zbtb22 (ENSMAUG00000014068) Tapbp (ENSMAUG00000005999) ENSMAUG00000007762 Chinese hamster chok1gshd MODERN SPECIES 303 Zfp523 (ENSCGRG00001020582) Scube3 (ENSCGRG00001016041) Tcp11 (ENSCGRG00001020725) Anks1 (ENSCGRG00001019540) Taf11 (ENSCGRG00001000736) Uhrf1bp1 (ENSCGRG00001018079) ENSCGRG00001009011 ENSCGRG00001001907 Ilrun (ENSCGRG00001024033) Spdef (ENSCGRG00001013540) Pacsin1 (ENSCGRG00001000381) ENSCGRG00001018710 Nudt3 (ENSCGRG00001014942) Smim29 (ENSCGRG00001011777) Hmga1 (ENSCGRG00001002340) ENSCGRG00001015412 ##22 Lemd2 (ENSCGRG00001010388) Ip6k3 (ENSCGRG00001005691) Uqcc2 (ENSCGRG00001023447) Itpr3 (ENSCGRG00001002765) Ggnbp1 (ENSCGRG00001015484) Bak1 (ENSCGRG00001012370) Zbtb9 (ENSCGRG00001012006) Syngap1 (ENSCGRG00001017977) Phf1 (ENSCGRG00001019832) Cuta (ENSCGRG00001018695) ENSCGRG00001012172 Daxx (ENSCGRG00001007861) Zbtb22 (ENSCGRG00001020183) Tapbp (ENSCGRG00001019225) Rgl2 (ENSCGRG00001005003) Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Prairie vole MODERN SPECIES 352 Def6 (ENSMOCG00000012935) ENSMOCG00000013791 Scube3 (ENSMOCG00000018773) Tcp11 (ENSMOCG00000020027) ENSMOCG00000000600 Taf11 (ENSMOCG00000014739) Uhrf1bp1 (ENSMOCG00000019070) Snrpc (ENSMOCG00000017609) Ilrun (ENSMOCG00000021618) Spdef (ENSMOCG00000015432) Pacsin1 (ENSMOCG00000016272) ENSMOCG00000010589 Nudt3 (ENSMOCG00000015183) Smim29 (ENSMOCG00000020775) Hmga1b (ENSMOCG00000021224) Grm4 (ENSMOCG00000018236) ##22 Lemd2 (ENSMOCG00000020451) Ip6k3 (ENSMOCG00000017166) Uqcc2 (ENSMOCG00000020094) Itpr3 (ENSMOCG00000017037) Ggnbp1 (ENSMOCG00000002798) Bak1 (ENSMOCG00000018013) Zbtb9 (ENSMOCG00000018315) Syngap1 (ENSMOCG00000021904) Cuta (ENSMOCG00000022966) Phf1 (ENSMOCG00000015733) ENSMOCG00000001648 Daxx (ENSMOCG00000007154) Tapbp (ENSMOCG00000010072) Rgl2 (ENSMOCG00000022698) Pfdn6 (ENSMOCG00000022424) Northern American deer mouse MODERN SPECIES 13 Def6 (ENSPEMG00000012978) Zfp523 (ENSPEMG00000003720) Scube3 (ENSPEMG00000010616) Tcp11 (ENSPEMG00000007157) Anks1 (ENSPEMG00000013765) ENSPEMG00000025271 Uhrf1bp1 (ENSPEMG00000007001) Snrpc (ENSPEMG00000010773) Ilrun (ENSPEMG00000012968) Spdef (ENSPEMG00000018293) Pacsin1 (ENSPEMG00000015284) Rps10 (ENSPEMG00000013126) Nudt3 (ENSPEMG00000029768) Smim29 (ENSPEMG00000013010) Hmga1b (ENSPEMG00000027659) Grm4 (ENSPEMG00000008393) ##22 Lemd2 (ENSPEMG00000029345) Ip6k3 (ENSPEMG00000010729) Uqcc2 (ENSPEMG00000019242) Itpr3 (ENSPEMG00000010465) Ggnbp1 (ENSPEMG00000017027) Bak1 (ENSPEMG00000026995) Zbtb9 (ENSPEMG00000005547) Syngap1 (ENSPEMG00000016655) Cuta (ENSPEMG00000015912) Phf1 (ENSPEMG00000008040) ENSPEMG00000005677 ENSPEMG00000030934 Daxx (ENSPEMG00000009347) Zbtb22 (ENSPEMG00000019021) Tapbp (ENSPEMG00000011953) Murinae ANCESTRAL SPECIES 18 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Mus ANCESTRAL SPECIES 21 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.c.b.b ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866 Mus_A ANCESTRAL SPECIES 10 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.c.b.b ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866 Mus_B ANCESTRAL SPECIES 9 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.c.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866 Mus_C ANCESTRAL SPECIES 9 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b.d ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866 Steppe mouse MODERN SPECIES 3360 Zfp523 (ENSMSIG00000007823) Scube3 (ENSMSIG00000007550) Tcp11 (ENSMSIG00000007312) Anks1 (ENSMSIG00000006570) Taf11 (ENSMSIG00000006531) Uhrf1bp1 (ENSMSIG00000006462) Snrpc (ENSMSIG00000006356) Ilrun (ENSMSIG00000006231) Spdef (ENSMSIG00000006129) Pacsin1 (ENSMSIG00000006080) ENSMSIG00000005933 ENSMSIG00000005759 Smim29 (ENSMSIG00000005684) ENSMSIG00000005670 ENSMSIG00000005358 Grm4 (ENSMSIG00000005245) ##22 Lemd2 (ENSMSIG00000005161) Ip6k3 (ENSMSIG00000005125) Uqcc2 (ENSMSIG00000005071) Itpr3 (ENSMSIG00000004883) Bak1 (ENSMSIG00000004848) Ggnbp1 (ENSMSIG00000004764) Zbtb9 (ENSMSIG00000004746) Syngap1 (ENSMSIG00000004408) Cuta (ENSMSIG00000004352) Phf1 (ENSMSIG00000004306) spretus MODERN SPECIES 8 Zfp523 (MGP_SPRETEiJ_G0022227) Scube3 (MGP_SPRETEiJ_G0022226) Tcp11 (MGP_SPRETEiJ_G0022225) Anks1 (MGP_SPRETEiJ_G0022224) Taf11 (MGP_SPRETEiJ_G0022223) Uhrf1bp1 (MGP_SPRETEiJ_G0022222) MGP_SPRETEiJ_G0022221 Ilrun (MGP_SPRETEiJ_G0022220) Spdef (MGP_SPRETEiJ_G0022219) Pacsin1 (MGP_SPRETEiJ_G0022218) Rps10 (MGP_SPRETEiJ_G0022217) Nudt3 (MGP_SPRETEiJ_G0022216) Smim29 (MGP_SPRETEiJ_G0022215) MGP_SPRETEiJ_G0022214 MGP_SPRETEiJ_G0022213 Grm4 (MGP_SPRETEiJ_G0022212) ##22 Lemd2 (MGP_SPRETEiJ_G0022211) Ip6k3 (MGP_SPRETEiJ_G0022210) Uqcc2 (MGP_SPRETEiJ_G0022209) Itpr3 (MGP_SPRETEiJ_G0022208) Bak1 (MGP_SPRETEiJ_G0022207) Ggnbp1 (MGP_SPRETEiJ_G0022206) Zbtb9 (MGP_SPRETEiJ_G0022205) Syngap1 (MGP_SPRETEiJ_G0022204) Cuta (MGP_SPRETEiJ_G0022203) Phf1 (MGP_SPRETEiJ_G0022202) MGP_SPRETEiJ_G0022201 MGP_SPRETEiJ_G0022200 Nkx2-5 (MGP_SPRETEiJ_G0022199) Bnip1 (MGP_SPRETEiJ_G0022198) Crebrf (MGP_SPRETEiJ_G0022197) Mouse MODERN SPECIES 8 Zfp523 (ENSMUSG00000024220) Scube3 (ENSMUSG00000038677) Tcp11 (ENSMUSG00000062859) Anks1 (ENSMUSG00000024219) Taf11 (ENSMUSG00000024218) Uhrf1bp1 (ENSMUSG00000039512) Snrpc (ENSMUSG00000024217) Ilrun (ENSMUSG00000056692) Spdef (ENSMUSG00000024215) Pacsin1 (ENSMUSG00000040276) Rps10 (ENSMUSG00000052146) Gm49804 (ENSMUSG00000117338) Nudt3 (ENSMUSG00000024213) Smim29 (ENSMUSG00000062753) Hmga1 (ENSMUSG00000046711) Grm4 (ENSMUSG00000063239) ##22 Lemd2 (ENSMUSG00000044857) Ip6k3 (ENSMUSG00000024210) Uqcc2 (ENSMUSG00000024208) Itpr3 (ENSMUSG00000042644) Bak1 (ENSMUSG00000057789) Ggnbp1 (ENSMUSG00000048731) Zbtb9 (ENSMUSG00000079605) Syngap1 (ENSMUSG00000067629) Cuta (ENSMUSG00000024194) Phf1 (ENSMUSG00000024193) Kifc5b (ENSMUSG00000024301) Nkx2-5 (ENSMUSG00000015579) Bnip1 (ENSMUSG00000024191) Crebrf (ENSMUSG00000048249) Atp6v0e (ENSMUSG00000015575) Ryukyu mouse MODERN SPECIES 8 Zfp523 (MGP_CAROLIEiJ_G0021314) Scube3 (MGP_CAROLIEiJ_G0021313) Tcp11 (MGP_CAROLIEiJ_G0021312) Anks1 (MGP_CAROLIEiJ_G0021311) Taf11 (MGP_CAROLIEiJ_G0021310) Uhrf1bp1 (MGP_CAROLIEiJ_G0021309) Snrpc (MGP_CAROLIEiJ_G0021308) Ilrun (MGP_CAROLIEiJ_G0021307) Spdef (MGP_CAROLIEiJ_G0021306) Pacsin1 (MGP_CAROLIEiJ_G0021305) Rps10 (MGP_CAROLIEiJ_G0021304) Nudt3 (MGP_CAROLIEiJ_G0021303) Smim29 (MGP_CAROLIEiJ_G0021302) MGP_CAROLIEiJ_G0021301 MGP_CAROLIEiJ_G0021300 Grm4 (MGP_CAROLIEiJ_G0021299) ##22 Lemd2 (MGP_CAROLIEiJ_G0021298) Ip6k3 (MGP_CAROLIEiJ_G0021297) Uqcc2 (MGP_CAROLIEiJ_G0021296) Itpr3 (MGP_CAROLIEiJ_G0021295) Bak1 (MGP_CAROLIEiJ_G0021294) Ggnbp1 (MGP_CAROLIEiJ_G0021293) Zbtb9 (MGP_CAROLIEiJ_G0021292) Syngap1 (MGP_CAROLIEiJ_G0021291) Cuta (MGP_CAROLIEiJ_G0021290) Phf1 (MGP_CAROLIEiJ_G0021289) MGP_CAROLIEiJ_G0021287 Nkx2-5 (MGP_CAROLIEiJ_G0021286) Bnip1 (MGP_CAROLIEiJ_G0021285) Crebrf (MGP_CAROLIEiJ_G0021284) MGP_CAROLIEiJ_G0021283 Shrew mouse MODERN SPECIES 13 Zfp523 (MGP_PahariEiJ_G0023632) Scube3 (MGP_PahariEiJ_G0023631) Tcp11 (MGP_PahariEiJ_G0023630) Anks1 (MGP_PahariEiJ_G0023629) Taf11 (MGP_PahariEiJ_G0023628) Uhrf1bp1 (MGP_PahariEiJ_G0023627) MGP_PahariEiJ_G0023626 MGP_PahariEiJ_G0023625 Spdef (MGP_PahariEiJ_G0023624) Pacsin1 (MGP_PahariEiJ_G0023623) Rps10 (MGP_PahariEiJ_G0023622) Nudt3 (MGP_PahariEiJ_G0023621) Smim29 (MGP_PahariEiJ_G0023620) MGP_PahariEiJ_G0023619 MGP_PahariEiJ_G0023618 Grm4 (MGP_PahariEiJ_G0023617) ##22 Lemd2 (MGP_PahariEiJ_G0023616) Ip6k3 (MGP_PahariEiJ_G0023615) Uqcc2 (MGP_PahariEiJ_G0023614) Itpr3 (MGP_PahariEiJ_G0023613) Bak1 (MGP_PahariEiJ_G0023612) Ggnbp1 (MGP_PahariEiJ_G0023611) Zbtb9 (MGP_PahariEiJ_G0023610) Syngap1 (MGP_PahariEiJ_G0023609) Cuta (MGP_PahariEiJ_G0023608) Phf1 (MGP_PahariEiJ_G0023607) MGP_PahariEiJ_G0023605 MGP_PahariEiJ_G0023606 Nkx2-5 (MGP_PahariEiJ_G0023604) Bnip1 (MGP_PahariEiJ_G0023603) Crebrf (MGP_PahariEiJ_G0023602) Rat MODERN SPECIES 12 Zfp523 (ENSRNOG00000000501) Scube3 (ENSRNOG00000000500) Tcp11 (ENSRNOG00000000499) Anks1a (ENSRNOG00000000498) Taf11 (ENSRNOG00000024601) Bltp3a (ENSRNOG00000000495) Snrpc (ENSRNOG00000000493) Ilrun (ENSRNOG00000038883) ENSRNOG00000058912 Spdef (ENSRNOG00000000491) Pacsin1 (ENSRNOG00000054603) Rps10l1 (ENSRNOG00000000490) Nudt3 (ENSRNOG00000061176) Smim29 (ENSRNOG00000054374) Hmga1 (ENSRNOG00000000488) Grm4 (ENSRNOG00000000487) ##22 Mln (ENSRNOG00000042186) Ip6k3 (ENSRNOG00000025883) Uqcc2 (ENSRNOG00000025909) ENSRNOG00000067891 Itpr3 (ENSRNOG00000052795) Bak1 (ENSRNOG00000000485) Ggnbp1 (ENSRNOG00000000486) Zbtb9 (ENSRNOG00000026799) Syngap1 (ENSRNOG00000000483) Cuta (ENSRNOG00000000481) Phf1 (ENSRNOG00000000480) Kifc1 (ENSRNOG00000000479) AA926063 (ENSRNOG00000000478) Daxx (ENSRNOG00000000477) Zbtb22 (ENSRNOG00000000476) Upper Galilee mountains blind mole rat MODERN SPECIES 1087 ENSNGAG00000012643 Scube3 (ENSNGAG00000013392) ENSNGAG00000015137 ENSNGAG00000014288 ENSNGAG00000015816 Taf11 (ENSNGAG00000016936) Uhrf1bp1 (ENSNGAG00000018660) Snrpc (ENSNGAG00000019686) Ilrun (ENSNGAG00000020755) Spdef (ENSNGAG00000021086) Pacsin1 (ENSNGAG00000021382) Rps10 (ENSNGAG00000021418) Nudt3 (ENSNGAG00000005815) Smim29 (ENSNGAG00000007902) ENSNGAG00000009189 Grm4 (ENSNGAG00000010916) ##22 Lemd2 (ENSNGAG00000012052) Ip6k3 (ENSNGAG00000012474) Uqcc2 (ENSNGAG00000013059) Itpr3 (ENSNGAG00000016614) Ggnbp1 (ENSNGAG00000000329) Bak1 (ENSNGAG00000000971) Zbtb9 (ENSNGAG00000017613) Syngap1 (ENSNGAG00000007288) Cuta (ENSNGAG00000013238) Phf1 (ENSNGAG00000014246) ENSNGAG00000016919 ENSNGAG00000019692 Tapbp (ENSNGAG00000000457) Rgl2 (ENSNGAG00000001749) Pfdn6 (ENSNGAG00000004185) Lesser Egyptian jerboa MODERN SPECIES 41 Scube3 (ENSJJAG00000020942) ENSJJAG00000020856 ENSJJAG00000001270 Anks1 (ENSJJAG00000022281) ENSJJAG00000022698 Uhrf1bp1 (ENSJJAG00000016778) Snrpc (ENSJJAG00000021741) Ilrun (ENSJJAG00000018829) Spdef (ENSJJAG00000019742) Pacsin1 (ENSJJAG00000019275) Rps10 (ENSJJAG00000023024) Nudt3 (ENSJJAG00000001351) ENSJJAG00000003056 Smim29 (ENSJJAG00000017387) ENSJJAG00000019684 Grm4 (ENSJJAG00000022598) ##22 ENSJJAG00000021141 Ip6k3 (ENSJJAG00000022349) Uqcc2 (ENSJJAG00000023718) Itpr3 (ENSJJAG00000023487) ENSJJAG00000020274 Bak1 (ENSJJAG00000005502) Zbtb9 (ENSJJAG00000022199) Syngap1 (ENSJJAG00000023548) Cuta (ENSJJAG00000021933) Phf1 (ENSJJAG00000003110) ENSJJAG00000006229 Daxx (ENSJJAG00000022212) ENSJJAG00000000854 ENSJJAG00000021860 ENSJJAG00000023644 Kangaroo rat MODERN SPECIES 439 Def6 (ENSDORG00000004837) ENSDORG00000004835 Scube3 (ENSDORG00000003155) Tcp11 (ENSDORG00000009354) Anks1 (ENSDORG00000009353) ENSDORG00000009352 Uhrf1bp1 (ENSDORG00000009351) ENSDORG00000005955 Ilrun (ENSDORG00000026614) Spdef (ENSDORG00000016134) Pacsin1 (ENSDORG00000016133) ENSDORG00000012060 Nudt3 (ENSDORG00000016311) Smim29 (ENSDORG00000028929) Hmga1b (ENSDORG00000025915) Grm4 (ENSDORG00000003502) ##22 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Sciuridae ANCESTRAL SPECIES 1 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Marmotini ANCESTRAL SPECIES 18 ENSGT00940000153185.a.a.b ENSGT00960000190885 ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00960000190479 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Marmotini_b ANCESTRAL SPECIES 8 ENSGT00940000153185.a.a.b ENSGT00960000190885 ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00960000190479 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Arctic ground squirrel MODERN SPECIES 25 SCUBE3 (ENSUPAG00010014823) ENSUPAG00010014803 TCP11 (ENSUPAG00010014741) ANKS1A (ENSUPAG00010014510) TAF11 (ENSUPAG00010014501) BLTP3A (ENSUPAG00010014463) ENSUPAG00010014443 ILRUN (ENSUPAG00010014410) SPDEF (ENSUPAG00010014371) PACSIN1 (ENSUPAG00010014340) RPS10 (ENSUPAG00010014271) NUDT3 (ENSUPAG00010014236) ENSUPAG00010014229 ENSUPAG00010014209 HMGA1 (ENSUPAG00010014148) GRM4 (ENSUPAG00010014105) ##22 MLN (ENSUPAG00010014101) LEMD2 (ENSUPAG00010014087) IP6K3 (ENSUPAG00010014072) UQCC2 (ENSUPAG00010014062) ITPR3 (ENSUPAG00010013963) ENSUPAG00010013955 BAK1 (ENSUPAG00010013946) ENSUPAG00010013936 ZBTB9 (ENSUPAG00010013935) SYNGAP1 (ENSUPAG00010013762) CUTA (ENSUPAG00010013747) PHF1 (ENSUPAG00010013695) KIFC1 (ENSUPAG00010013621) SMIM40 (ENSUPAG00010013617) DAXX (ENSUPAG00010013614) Squirrel MODERN SPECIES 76 DEF6 (ENSSTOG00000023306) ZNF76 (ENSSTOG00000000256) SCUBE3 (ENSSTOG00000000248) TCP11 (ENSSTOG00000000247) ANKS1A (ENSSTOG00000000241) TAF11 (ENSSTOG00000013562) BLTP3A (ENSSTOG00000026015) SNRPC (ENSSTOG00000013786) ILRUN (ENSSTOG00000024680) SPDEF (ENSSTOG00000028807) PACSIN1 (ENSSTOG00000024029) ENSSTOG00000013486 NUDT3 (ENSSTOG00000016560) SMIM29 (ENSSTOG00000009996) HMGA1 (ENSSTOG00000016559) GRM4 (ENSSTOG00000021639) ##22 LEMD2 (ENSSTOG00000000860) IP6K3 (ENSSTOG00000021218) UQCC2 (ENSSTOG00000000855) ITPR3 (ENSSTOG00000000825) ENSSTOG00000023969 BAK1 (ENSSTOG00000002492) ZBTB9 (ENSSTOG00000028789) SYNGAP1 (ENSSTOG00000002482) CUTA (ENSSTOG00000002474) PHF1 (ENSSTOG00000002459) KIFC1 (ENSSTOG00000002449) DAXX (ENSSTOG00000002441) ZBTB22 (ENSSTOG00000021763) TAPBP (ENSSTOG00000025004) RGL2 (ENSSTOG00000024728) Alpin marmot MODERN SPECIES 20 ZNF76 (ENSMMMG00000024327) SCUBE3 (ENSMMMG00000024326) ENSMMMG00000024324 TCP11 (ENSMMMG00000024323) ANKS1A (ENSMMMG00000024322) ENSMMMG00000024321 BLTP3A (ENSMMMG00000024320) ENSMMMG00000024319 ILRUN (ENSMMMG00000024318) PACSIN1 (ENSMMMG00000024316) RPS10 (ENSMMMG00000024315) NUDT3 (ENSMMMG00000024314) ENSMMMG00000024313 SMIM29 (ENSMMMG00000024310) HMGA1 (ENSMMMG00000024301) GRM4 (ENSMMMG00000024297) ##22 MLN (ENSMMMG00000024293) LEMD2 (ENSMMMG00000024291) IP6K3 (ENSMMMG00000024290) UQCC2 (ENSMMMG00000024286) ITPR3 (ENSMMMG00000024278) ENSMMMG00000024274 BAK1 (ENSMMMG00000024272) ZBTB9 (ENSMMMG00000024268) SYNGAP1 (ENSMMMG00000024248) CUTA (ENSMMMG00000024245) PHF1 (ENSMMMG00000024244) KIFC1 (ENSMMMG00000024243) SMIM40 (ENSMMMG00000024242) DAXX (ENSMMMG00000024241) TAPBP (ENSMMMG00000024240) Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005009159 TAF11 (ENSSVLG00005009195) BLTP3A (ENSSVLG00005009259) ENSSVLG00005009315 ENSSVLG00005009350 ENSSVLG00005009363 ENSSVLG00005009380 ILRUN (ENSSVLG00005009437) ENSSVLG00005009521 SPDEF (ENSSVLG00005009549) PACSIN1 (ENSSVLG00005009627) ENSSVLG00005009721 ENSSVLG00005009849 SMIM29 (ENSSVLG00005009875) HMGA1 (ENSSVLG00005009928) GRM4 (ENSSVLG00005010040) ##22 MLN (ENSSVLG00005010325) LEMD2 (ENSSVLG00005010376) IP6K3 (ENSSVLG00005010422) UQCC2 (ENSSVLG00005010471) ITPR3 (ENSSVLG00005010544) ENSSVLG00005010600 ENSSVLG00005010672 ENSSVLG00005010748 ENSSVLG00005004290 ZBTB9 (ENSSVLG00005004305) SYNGAP1 (ENSSVLG00005004360) CUTA (ENSSVLG00005004466) PHF1 (ENSSVLG00005004509) ENSSVLG00005004551 SMIM40 (ENSSVLG00005004582) Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.b.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Naked mole-rat female MODERN SPECIES 4 ZNF76 (ENSHGLG00000013342) SCUBE3 (ENSHGLG00000013799) TCP11 (ENSHGLG00000015933) ANKS1A (ENSHGLG00000016179) ENSHGLG00000016220 BLTP3A (ENSHGLG00000013152) SNRPC (ENSHGLG00000050686) ENSHGLG00000035791 ENSHGLG00000019438 SPDEF (ENSHGLG00000016872) PACSIN1 (ENSHGLG00000034230) RPS10 (ENSHGLG00000019210) NUDT3 (ENSHGLG00000019328) ENSHGLG00000036849 ENSHGLG00000019318 GRM4 (ENSHGLG00000017549) ##22 ENSHGLG00000043165 LEMD2 (ENSHGLG00000017560) IP6K3 (ENSHGLG00000017231) UQCC2 (ENSHGLG00000017241) ITPR3 (ENSHGLG00000017265) ENSHGLG00000017276 ZBTB9 (ENSHGLG00000021359) ENSHGLG00000043131 ENSHGLG00000017582 ENSHGLG00000017591 ENSHGLG00000019206 ENSHGLG00000017183 RCAN2 (ENSHGLG00000033844) ENSHGLG00000045423 ENPP4 (ENSHGLG00000014196) Hystricomorpha_a ANCESTRAL SPECIES 42 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.c.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Guinea pig MODERN SPECIES 15 PPARD (ENSCPOG00000011385) DEF6 (ENSCPOG00000027364) ZNF76 (ENSCPOG00000007381) SCUBE3 (ENSCPOG00000015286) TCP11 (ENSCPOG00000011287) ANKS1A (ENSCPOG00000015430) TAF11 (ENSCPOG00000031905) BLTP3A (ENSCPOG00000015425) SNRPC (ENSCPOG00000008563) ILRUN (ENSCPOG00000010706) SPDEF (ENSCPOG00000020697) PACSIN1 (ENSCPOG00000012000) RPS10 (ENSCPOG00000008613) NUDT3 (ENSCPOG00000003929) HMGA1 (ENSCPOG00000031062) GRM4 (ENSCPOG00000000288) ##22 MLN (ENSCPOG00000007949) LEMD2 (ENSCPOG00000007946) IP6K3 (ENSCPOG00000013261) UQCC2 (ENSCPOG00000034353) ITPR3 (ENSCPOG00000014107) BAK1 (ENSCPOG00000000108) ZBTB9 (ENSCPOG00000035179) SYNGAP1 (ENSCPOG00000002979) CUTA (ENSCPOG00000008762) PHF1 (ENSCPOG00000008751) KIFC1 (ENSCPOG00000010632) DAXX (ENSCPOG00000006780) ZBTB22 (ENSCPOG00000035676) TAPBP (ENSCPOG00000024169) RGL2 (ENSCPOG00000012737) Hystricomorpha_b ANCESTRAL SPECIES 3 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a.d ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000159200 ENSGT00940000161403 ENSGT00390000010512 ENSGT00390000007075 Degu MODERN SPECIES 46 SCUBE3 (ENSODEG00000017212) ENSODEG00000020378 ENSODEG00000016903 ANKS1A (ENSODEG00000017014) TAF11 (ENSODEG00000016983) BLTP3A (ENSODEG00000017715) ENSODEG00000017080 ILRUN (ENSODEG00000017302) ENSODEG00000017064 SPDEF (ENSODEG00000017318) PACSIN1 (ENSODEG00000016899) ENSODEG00000017159 NUDT3 (ENSODEG00000017009) SMIM29 (ENSODEG00000016986) HMGA1 (ENSODEG00000017058) GRM4 (ENSODEG00000017030) ##22 LEMD2 (ENSODEG00000017492) IP6K3 (ENSODEG00000016935) ENSODEG00000017142 ITPR3 (ENSODEG00000017165) BAK1 (ENSODEG00000017211) ZBTB9 (ENSODEG00000017442) SYNGAP1 (ENSODEG00000017205) CUTA (ENSODEG00000017063) PHF1 (ENSODEG00000017098) KIFC1 (ENSODEG00000017215) ENSODEG00000017039 DAXX (ENSODEG00000017044) TAPBP (ENSODEG00000017301) RGL2 (ENSODEG00000017326) ENSODEG00000017649 Long-tailed chinchilla MODERN SPECIES 144 DEF6 (ENSCLAG00000010815) ZNF76 (ENSCLAG00000007582) SCUBE3 (ENSCLAG00000012780) TCP11 (ENSCLAG00000011475) ANKS1A (ENSCLAG00000009134) TAF11 (ENSCLAG00000013347) BLTP3A (ENSCLAG00000016999) SNRPC (ENSCLAG00000016920) ILRUN (ENSCLAG00000010022) SPDEF (ENSCLAG00000008792) PACSIN1 (ENSCLAG00000011333) RPS10 (ENSCLAG00000009803) NUDT3 (ENSCLAG00000009016) SMIM29 (ENSCLAG00000011061) HMGA1 (ENSCLAG00000010467) GRM4 (ENSCLAG00000010404) ##22 LEMD2 (ENSCLAG00000008317) IP6K3 (ENSCLAG00000009756) UQCC2 (ENSCLAG00000009455) ITPR3 (ENSCLAG00000009348) BAK1 (ENSCLAG00000015649) ZBTB9 (ENSCLAG00000011733) SYNGAP1 (ENSCLAG00000010661) CUTA (ENSCLAG00000007315) PHF1 (ENSCLAG00000008684) KIFC1 (ENSCLAG00000007341) DAXX (ENSCLAG00000010016) TAPBP (ENSCLAG00000010992) RGL2 (ENSCLAG00000009780) PFDN6 (ENSCLAG00000010475) WDR46 (ENSCLAG00000007512) Lagomorpha ANCESTRAL SPECIES 2 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Rabbit MODERN SPECIES 3 FKBP5 (ENSOCUG00000005513) PPARD (ENSOCUG00000007732) DEF6 (ENSOCUG00000015644) ZNF76 (ENSOCUG00000015630) SCUBE3 (ENSOCUG00000015611) TCP11 (ENSOCUG00000015587) ANKS1A (ENSOCUG00000015569) TAF11 (ENSOCUG00000002023) BLTP3A (ENSOCUG00000002018) ENSOCUG00000026668 ENSOCUG00000024862 PACSIN1 (ENSOCUG00000011332) ENSOCUG00000011373 NUDT3 (ENSOCUG00000013405) ENSOCUG00000022537 GRM4 (ENSOCUG00000002450) ##22 ENSOCUG00000013398 ENSOCUG00000022909 IP6K3 (ENSOCUG00000029364) UQCC2 (ENSOCUG00000005802) ITPR3 (ENSOCUG00000005766) BAK1 (ENSOCUG00000002556) ZBTB9 (ENSOCUG00000025266) SYNGAP1 (ENSOCUG00000001039) CUTA (ENSOCUG00000025968) PHF1 (ENSOCUG00000013680) KIFC1 (ENSOCUG00000010708) SMIM40 (ENSOCUG00000037016) DAXX (ENSOCUG00000010574) TAPBP (ENSOCUG00000010563) RGL2 (ENSOCUG00000026930) Primates ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Mouse lemur MODERN SPECIES 28 TCP11 (ENSMICG00000005056) ANKS1A (ENSMICG00000014070) ENSMICG00000047647 ENSMICG00000047097 ENSMICG00000014063 BLTP3A (ENSMICG00000014035) ENSMICG00000007339 ILRUN (ENSMICG00000047546) ENSMICG00000029461 SPDEF (ENSMICG00000013437) PACSIN1 (ENSMICG00000030734) ENSMICG00000031123 NUDT3 (ENSMICG00000026429) SMIM29 (ENSMICG00000029002) HMGA1 (ENSMICG00000036252) GRM4 (ENSMICG00000003131) ##22 MLN (ENSMICG00000016491) LEMD2 (ENSMICG00000016479) IP6K3 (ENSMICG00000016472) ENSMICG00000016469 ITPR3 (ENSMICG00000016370) BAK1 (ENSMICG00000031665) PTCHD4 (ENSMICG00000015380) OPN5 (ENSMICG00000015348) ADGRF4 (ENSMICG00000015299) ENSMICG00000033055 CD2AP (ENSMICG00000015240) ENSMICG00000041964 TNFRSF21 (ENSMICG00000017760) ADGRF1 (ENSMICG00000017759) ADGRF5 (ENSMICG00000017758) Lemuriformes_a ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00390000008099.u.b #32 ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Greater bamboo lemur MODERN SPECIES 318 SPDEF (ENSPSMG00000008512) PACSIN1 (ENSPSMG00000008541) RPS10 (ENSPSMG00000008574) NUDT3 (ENSPSMG00000008602) ENSPSMG00000008606 ENSPSMG00000008613 SMIM29 (ENSPSMG00000008643) ENSPSMG00000008675 GRM4 (ENSPSMG00000008799) ##22 MLN (ENSPSMG00000008840) LEMD2 (ENSPSMG00000008863) IP6K3 (ENSPSMG00000008873) UQCC2 (ENSPSMG00000008888) ENSPSMG00000009013 BAK1 (ENSPSMG00000009025) ENSPSMG00000009034 #32 Coquerels sifaka MODERN SPECIES 356 DEF6 (ENSPCOG00000026130) ZNF76 (ENSPCOG00000013296) SCUBE3 (ENSPCOG00000021049) TCP11 (ENSPCOG00000024469) ANKS1A (ENSPCOG00000021030) TAF11 (ENSPCOG00000014818) BLTP3A (ENSPCOG00000025815) SNRPC (ENSPCOG00000004904) ILRUN (ENSPCOG00000026218) SPDEF (ENSPCOG00000027590) PACSIN1 (ENSPCOG00000013300) RPS10 (ENSPCOG00000015821) NUDT3 (ENSPCOG00000013295) SMIM29 (ENSPCOG00000019890) HMGA1 (ENSPCOG00000022375) GRM4 (ENSPCOG00000025240) ##22 Bushbaby MODERN SPECIES 146 TCP11 (ENSOGAG00000031615) ENSOGAG00000028462 ANKS1A (ENSOGAG00000008526) TAF11 (ENSOGAG00000008522) BLTP3A (ENSOGAG00000016353) ENSOGAG00000008755 ILRUN (ENSOGAG00000011264) SPDEF (ENSOGAG00000011260) PACSIN1 (ENSOGAG00000029242) ENSOGAG00000027856 ENSOGAG00000001365 ENSOGAG00000031287 NUDT3 (ENSOGAG00000034590) SMIM29 (ENSOGAG00000015674) ENSOGAG00000025948 GRM4 (ENSOGAG00000029055) ##22 MLN (ENSOGAG00000015614) LEMD2 (ENSOGAG00000030156) IP6K3 (ENSOGAG00000015606) UQCC2 (ENSOGAG00000015604) ITPR3 (ENSOGAG00000015581) ENSOGAG00000015578 BAK1 (ENSOGAG00000015573) ZBTB9 (ENSOGAG00000026628) SYNGAP1 (ENSOGAG00000015560) ENSOGAG00000015556 PHF1 (ENSOGAG00000015551) KIFC1 (ENSOGAG00000013028) ENSOGAG00000004002 ZBTB22 (ENSOGAG00000033956) TAPBP (ENSOGAG00000003999) Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Tarsier MODERN SPECIES 5961 SNRPC (ENSTSYG00000011216) ILRUN (ENSTSYG00000007590) SPDEF (ENSTSYG00000011393) PACSIN1 (ENSTSYG00000027582) RPS10 (ENSTSYG00000032368) NUDT3 (ENSTSYG00000003608) SMIM29 (ENSTSYG00000036429) HMGA1 (ENSTSYG00000025919) GRM4 (ENSTSYG00000026349) ##22 MLN (ENSTSYG00000008721) ENSTSYG00000014312 IP6K3 (ENSTSYG00000001526) UQCC2 (ENSTSYG00000000510) ITPR3 (ENSTSYG00000033238) Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00950000182857.a.a.b.a.r.a.b.b.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Hominoidea ANCESTRAL SPECIES 4 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00440000034918.q.a.b ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00950000182857.a.a.b.a.r.a.b.b.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l.b ENSGT00390000011871 ENSGT00730000111329.l.a.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00440000034918.q.a.b ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l.a.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415.e ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.a ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l.a.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415.e ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.a ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l.a.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Pan ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415.e ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00910000148210 ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329.l.a.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Bonobo MODERN SPECIES 19 SCUBE3 (ENSPPAG00000043824) TCP11 (ENSPPAG00000036085) ANKS1A (ENSPPAG00000000841) TAF11 (ENSPPAG00000041432) BLTP3A (ENSPPAG00000030877) SNRPC (ENSPPAG00000043871) ENSPPAG00000031072 ILRUN (ENSPPAG00000040518) SPDEF (ENSPPAG00000042558) PACSIN1 (ENSPPAG00000001207) ENSPPAG00000041795 ENSPPAG00000038030 NUDT3 (ENSPPAG00000031106) SMIM29 (ENSPPAG00000031721) ENSPPAG00000031034 GRM4 (ENSPPAG00000043362) ##22 MLN (ENSPPAG00000033007) ENSPPAG00000035724 IP6K3 (ENSPPAG00000032091) UQCC2 (ENSPPAG00000039893) ENSPPAG00000024853 ITPR3 (ENSPPAG00000040289) BAK1 (ENSPPAG00000029631) ZBTB9 (ENSPPAG00000016279) SYNGAP1 (ENSPPAG00000036420) CUTA (ENSPPAG00000037422) PHF1 (ENSPPAG00000034810) KIFC1 (ENSPPAG00000042032) ENSPPAG00000039323 ENSPPAG00000028889 DAXX (ENSPPAG00000028039) Chimpanzee MODERN SPECIES 19 ZNF76 (ENSPTRG00000018080) SCUBE3 (ENSPTRG00000018079) TCP11 (ENSPTRG00000018077) ANKS1A (ENSPTRG00000018076) TAF11 (ENSPTRG00000018075) BLTP3A (ENSPTRG00000018074) SNRPC (ENSPTRG00000018070) ILRUN (ENSPTRG00000018068) SPDEF (ENSPTRG00000018065) PACSIN1 (ENSPTRG00000018064) ENSPTRG00000018063 ENSPTRG00000052440 NUDT3 (ENSPTRG00000018062) SMIM29 (ENSPTRG00000018061) HMGA1 (ENSPTRG00000040884) GRM4 (ENSPTRG00000018059) ##22 MLN (ENSPTRG00000018058) LEMD2 (ENSPTRG00000018057) IP6K3 (ENSPTRG00000018056) UQCC2 (ENSPTRG00000018055) ENSPTRG00000044431 ITPR3 (ENSPTRG00000018054) BAK1 (ENSPTRG00000018053) ZBTB9 (ENSPTRG00000018052) SYNGAP1 (ENSPTRG00000033928) CUTA (ENSPTRG00000018050) PHF1 (ENSPTRG00000018049) KIFC1 (ENSPTRG00000018047) DAXX (ENSPTRG00000018045) ZBTB22 (ENSPTRG00000018044) TAPBP (ENSPTRG00000018043) Human MODERN SPECIES 18 ZNF76 (ENSG00000065029) SCUBE3 (ENSG00000146197) TCP11 (ENSG00000124678) ANKS1A (ENSG00000064999) TAF11 (ENSG00000064995) BLTP3A (ENSG00000065060) SNRPC (ENSG00000124562) ILRUN (ENSG00000196821) SPDEF (ENSG00000124664) PACSIN1 (ENSG00000124507) RPS10 (ENSG00000124614) RPS10-NUDT3 (ENSG00000270800) NUDT3 (ENSG00000272325) SMIM29 (ENSG00000186577) HMGA1 (ENSG00000137309) GRM4 (ENSG00000124493) ##22 MLN (ENSG00000096395) LEMD2 (ENSG00000161904) IP6K3 (ENSG00000161896) UQCC2 (ENSG00000137288) ITPR3 (ENSG00000096433) BAK1 (ENSG00000030110) ZBTB9 (ENSG00000213588) SYNGAP1 (ENSG00000197283) CUTA (ENSG00000112514) PHF1 (ENSG00000112511) KIFC1 (ENSG00000237649) SMIM40 (ENSG00000286920) DAXX (ENSG00000204209) ZBTB22 (ENSG00000236104) TAPBP (ENSG00000231925) Gorilla MODERN SPECIES 19 DEF6 (ENSGGOG00000016204) ZNF76 (ENSGGOG00000014188) SCUBE3 (ENSGGOG00000016378) TCP11 (ENSGGOG00000016087) ANKS1A (ENSGGOG00000007973) TAF11 (ENSGGOG00000012371) BLTP3A (ENSGGOG00000014664) SNRPC (ENSGGOG00000012499) ILRUN (ENSGGOG00000000388) SPDEF (ENSGGOG00000000383) PACSIN1 (ENSGGOG00000023013) NUDT3 (ENSGGOG00000039407) ENSGGOG00000038559 ENSGGOG00000024443 ENSGGOG00000025804 GRM4 (ENSGGOG00000005313) ##22 MLN (ENSGGOG00000008134) LEMD2 (ENSGGOG00000008126) IP6K3 (ENSGGOG00000016288) UQCC2 (ENSGGOG00000043321) ENSGGOG00000023740 ITPR3 (ENSGGOG00000016235) BAK1 (ENSGGOG00000022462) ENSGGOG00000025210 ZBTB9 (ENSGGOG00000040099) SYNGAP1 (ENSGGOG00000009923) CUTA (ENSGGOG00000000265) PHF1 (ENSGGOG00000000264) KIFC1 (ENSGGOG00000000261) ENSGGOG00000009233 ENSGGOG00000024257 Orangutan MODERN SPECIES 19 DEF6 (ENSPPYG00000016526) ZNF76 (ENSPPYG00000016525) SCUBE3 (ENSPPYG00000016524) TCP11 (ENSPPYG00000016523) ANKS1A (ENSPPYG00000016522) TAF11 (ENSPPYG00000016521) BLTP3A (ENSPPYG00000016520) SNRPC (ENSPPYG00000017272) ENSPPYG00000032792 ILRUN (ENSPPYG00000016519) SPDEF (ENSPPYG00000016518) PACSIN1 (ENSPPYG00000016517) ENSPPYG00000016516 NUDT3 (ENSPPYG00000016515) ENSPPYG00000016514 GRM4 (ENSPPYG00000016512) ##22 MLN (ENSPPYG00000016511) LEMD2 (ENSPPYG00000016510) IP6K3 (ENSPPYG00000016509) ENSPPYG00000016508 ENSPPYG00000016507 ITPR3 (ENSPPYG00000016504) BAK1 (ENSPPYG00000016502) ZBTB9 (ENSPPYG00000016501) SYNGAP1 (ENSPPYG00000016500) CUTA (ENSPPYG00000016499) PHF1 (ENSPPYG00000016498) KIFC1 (ENSPPYG00000016497) ENSPPYG00000016496 SMIM40 (ENSPPYG00000031014) DAXX (ENSPPYG00000017250) Gibbon MODERN SPECIES 10 TAF11 (ENSNLEG00000008457) BLTP3A (ENSNLEG00000008400) SNRPC (ENSNLEG00000034810) ENSNLEG00000027593 ENSNLEG00000031071 ENSNLEG00000035761 SPDEF (ENSNLEG00000008374) PACSIN1 (ENSNLEG00000008343) ENSNLEG00000008336 ENSNLEG00000033500 NUDT3 (ENSNLEG00000029692) ENSNLEG00000033901 SMIM29 (ENSNLEG00000032266) HMGA1 (ENSNLEG00000031539) ENSNLEG00000034916 GRM4 (ENSNLEG00000008487) ##22 MLN (ENSNLEG00000008478) ENSNLEG00000008472 IP6K3 (ENSNLEG00000008448) UQCC2 (ENSNLEG00000035324) ITPR3 (ENSNLEG00000008373) BAK1 (ENSNLEG00000028170) ZBTB9 (ENSNLEG00000008348) ENSNLEG00000033973 PHF1 (ENSNLEG00000008320) KIFC1 (ENSNLEG00000008288) ZBTB22 (ENSNLEG00000030172) ENSNLEG00000006852 RGL2 (ENSNLEG00000006847) PFDN6 (ENSNLEG00000034338) ENSNLEG00000006842 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000161869 ENSGT00550000074838.e ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00950000182857.a.a.b.a.r.a.b.b.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00390000011871 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Rhinopithecus ANCESTRAL SPECIES 31 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00950000182857.a.a.b.a.r.a.b.b.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.a.a.a.d.m ENSGT00440000034918.r.h.a ENSGT00940000157882 ENSGT00910000148034 ENSGT00950000182872.f.a.a.b.r.b.a.a ENSGT00410000025882.b ENSGT00730000111329.l.d.a ENSGT00730000111329.l.d.b ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00910000146977 ENSGT01090000260100.A.j ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00940000168716 ENSGT00390000009448 ENSGT00940000160991 Golden snub-nosed monkey MODERN SPECIES 3244 ILRUN (ENSRROG00000039638) SPDEF (ENSRROG00000030067) PACSIN1 (ENSRROG00000044346) ENSRROG00000011959 ENSRROG00000030593 NUDT3 (ENSRROG00000019323) ENSRROG00000014514 ENSRROG00000027348 SMIM29 (ENSRROG00000030413) ENSRROG00000022352 GRM4 (ENSRROG00000035463) ##22 Black snub-nosed monkey MODERN SPECIES 1651 ENSRBIG00000034989 ANKS1A (ENSRBIG00000037624) TAF11 (ENSRBIG00000021601) BLTP3A (ENSRBIG00000042064) ENSRBIG00000037567 ILRUN (ENSRBIG00000041529) ENSRBIG00000043717 SPDEF (ENSRBIG00000002665) PACSIN1 (ENSRBIG00000037018) ENSRBIG00000037448 NUDT3 (ENSRBIG00000028109) ENSRBIG00000012680 ENSRBIG00000027690 SMIM29 (ENSRBIG00000028207) ENSRBIG00000030072 GRM4 (ENSRBIG00000037392) ##22 MLN (ENSRBIG00000012093) LEMD2 (ENSRBIG00000031339) IP6K3 (ENSRBIG00000028384) ENSRBIG00000014909 ITPR3 (ENSRBIG00000044105) ENSRBIG00000035323 BAK1 (ENSRBIG00000042255) ZBTB9 (ENSRBIG00000025097) SYNGAP1 (ENSRBIG00000027954) CUTA (ENSRBIG00000035030) PHF1 (ENSRBIG00000028706) KIFC1 (ENSRBIG00000036961) ENSRBIG00000042037 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00550000074838.e ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00390000011871 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00910000146977 ENSGT00510000048041.p ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 Vervet Monkey MODERN SPECIES 8 ZNF76 (ENSCSAG00000009955) SCUBE3 (ENSCSAG00000009938) ENSCSAG00000009901 TCP11 (ENSCSAG00000009892) ANKS1A (ENSCSAG00000009858) ENSCSAG00000009843 BLTP3A (ENSCSAG00000009829) ENSCSAG00000019305 SNRPC (ENSCSAG00000009821) ILRUN (ENSCSAG00000009818) SPDEF (ENSCSAG00000009798) PACSIN1 (ENSCSAG00000009789) NUDT3 (ENSCSAG00000009782) ENSCSAG00000009778 HMGA1 (ENSCSAG00000009775) GRM4 (ENSCSAG00000009763) ##22 MLN (ENSCSAG00000009706) LEMD2 (ENSCSAG00000009695) IP6K3 (ENSCSAG00000009672) UQCC2 (ENSCSAG00000009662) ITPR3 (ENSCSAG00000009649) BAK1 (ENSCSAG00000009617) ZBTB9 (ENSCSAG00000019306) SYNGAP1 (ENSCSAG00000009596) CUTA (ENSCSAG00000009582) PHF1 (ENSCSAG00000009589) KIFC1 (ENSCSAG00000009576) DAXX (ENSCSAG00000009571) ZBTB22 (ENSCSAG00000019307) TAPBP (ENSCSAG00000009568) RGL2 (ENSCSAG00000009562) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000161869 ENSGT00550000074838.e ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00910000148034 ENSGT00390000011871 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Macaca ANCESTRAL SPECIES 9 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00910000148034 ENSGT00390000011871 ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.f ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT01100000263920.C ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.a.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.i ENSGT00940000157882 ENSGT00390000011871 ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.f ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00940000157078 ENSGT00910000146977 ENSGT00390000015789.c.a.b ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00530000064449.E.l ENSGT00390000009448 Rhesus MODERN SPECIES 14 TCP11 (ENSMMUG00000021720) ENSMMUG00000060313 ANKS1A (ENSMMUG00000021718) TAF11 (ENSMMUG00000021715) BLTP3A (ENSMMUG00000021712) SNRPC (ENSMMUG00000000869) ENSMMUG00000063472 ILRUN (ENSMMUG00000022824) ENSMMUG00000058767 SPDEF (ENSMMUG00000056340) PACSIN1 (ENSMMUG00000007811) NUDT3 (ENSMMUG00000019532) ENSMMUG00000029987 ENSMMUG00000019531 HMGA1 (ENSMMUG00000019529) GRM4 (ENSMMUG00000023046) ##22 MLN (ENSMMUG00000021738) LEMD2 (ENSMMUG00000021734) IP6K3 (ENSMMUG00000045656) UQCC2 (ENSMMUG00000020703) ITPR3 (ENSMMUG00000047729) ENSMMUG00000058175 ENSMMUG00000052902 ENSMMUG00000019505 BAK1 (ENSMMUG00000063304) ZBTB9 (ENSMMUG00000029765) SYNGAP1 (ENSMMUG00000010659) PHF1 (ENSMMUG00000010649) CUTA (ENSMMUG00000010658) KIFC1 (ENSMMUG00000007477) ENSMMUG00000051253 Crab-eating macaque MODERN SPECIES 14 ANKS1A (ENSMFAG00000003052) TAF11 (ENSMFAG00000035760) BLTP3A (ENSMFAG00000000555) ENSMFAG00000031764 ENSMFAG00000065156 SPDEF (ENSMFAG00000031435) ENSMFAG00000057349 PACSIN1 (ENSMFAG00000036381) ENSMFAG00000039924 NUDT3 (ENSMFAG00000042647) ENSMFAG00000028033 ENSMFAG00000064073 ENSMFAG00000065608 ENSMFAG00000001292 ENSMFAG00000059689 GRM4 (ENSMFAG00000043495) ##22 MLN (ENSMFAG00000032195) ENSMFAG00000001775 IP6K3 (ENSMFAG00000036096) UQCC2 (ENSMFAG00000039620) ITPR3 (ENSMFAG00000039709) ENSMFAG00000037076 EIF1 (ENSMFAG00000046072) BAK1 (ENSMFAG00000029410) ZBTB9 (ENSMFAG00000025074) SYNGAP1 (ENSMFAG00000041047) CUTA (ENSMFAG00000044039) PHF1 (ENSMFAG00000040302) KIFC1 (ENSMFAG00000036107) ENSMFAG00000058856 DAXX (ENSMFAG00000038728) Pig-tailed macaque MODERN SPECIES 528 ZNF76 (ENSMNEG00000036701) SCUBE3 (ENSMNEG00000022720) TCP11 (ENSMNEG00000037244) ANKS1A (ENSMNEG00000042805) TAF11 (ENSMNEG00000032309) BLTP3A (ENSMNEG00000043690) SNRPC (ENSMNEG00000032731) ILRUN (ENSMNEG00000034761) SPDEF (ENSMNEG00000044984) PACSIN1 (ENSMNEG00000039933) ENSMNEG00000043352 NUDT3 (ENSMNEG00000033006) ENSMNEG00000023546 ENSMNEG00000041775 ENSMNEG00000005671 GRM4 (ENSMNEG00000044576) ##22 MLN (ENSMNEG00000032540) LEMD2 (ENSMNEG00000038123) IP6K3 (ENSMNEG00000038698) ENSMNEG00000029597 ENSMNEG00000041642 ITPR3 (ENSMNEG00000036557) BAK1 (ENSMNEG00000029718) ZBTB9 (ENSMNEG00000004451) SYNGAP1 (ENSMNEG00000038386) CUTA (ENSMNEG00000037602) PHF1 (ENSMNEG00000039621) KIFC1 (ENSMNEG00000034876) DAXX (ENSMNEG00000040481) ZBTB22 (ENSMNEG00000016441) TAPBP (ENSMNEG00000029255) Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00940000161869 ENSGT00550000074838.e ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.a ENSGT00940000157882 ENSGT00910000148034 ENSGT00390000011871 ENSGT00410000025882.b ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Olive baboon MODERN SPECIES 16 TCP11 (ENSPANG00000024080) ENSPANG00000048759 ANKS1A (ENSPANG00000016478) TAF11 (ENSPANG00000009105) BLTP3A (ENSPANG00000008271) SNRPC (ENSPANG00000022802) ENSPANG00000049468 ENSPANG00000038047 ILRUN (ENSPANG00000020768) SPDEF (ENSPANG00000016482) PACSIN1 (ENSPANG00000016481) ENSPANG00000049744 ENSPANG00000016480 SMIM29 (ENSPANG00000029208) HMGA1 (ENSPANG00000043347) GRM4 (ENSPANG00000012328) ##22 MLN (ENSPANG00000009106) LEMD2 (ENSPANG00000017101) IP6K3 (ENSPANG00000037017) UQCC2 (ENSPANG00000010760) ENSPANG00000007623 ITPR3 (ENSPANG00000017411) BAK1 (ENSPANG00000031258) ENSPANG00000039481 ZBTB9 (ENSPANG00000012823) SYNGAP1 (ENSPANG00000014561) CUTA (ENSPANG00000022347) PHF1 (ENSPANG00000009191) KIFC1 (ENSPANG00000020271) ENSPANG00000038941 SMIM40 (ENSPANG00000047345) Cercopithecinae_d ANCESTRAL SPECIES 13 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a.e ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.a ENSGT00940000157882 ENSGT00910000148034 ENSGT00390000011871 ENSGT00730000111329.l ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041.o ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A.i.a ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Sooty mangabey MODERN SPECIES 97 SCUBE3 (ENSCATG00000043555) TCP11 (ENSCATG00000023254) ANKS1A (ENSCATG00000008652) ENSCATG00000009047 TAF11 (ENSCATG00000036264) BLTP3A (ENSCATG00000030943) SNRPC (ENSCATG00000035787) ILRUN (ENSCATG00000030451) SPDEF (ENSCATG00000018528) PACSIN1 (ENSCATG00000030095) RPS10 (ENSCATG00000043558) NUDT3 (ENSCATG00000043783) ENSCATG00000041218 ENSCATG00000038836 ENSCATG00000042051 GRM4 (ENSCATG00000022825) ##22 MLN (ENSCATG00000041664) LEMD2 (ENSCATG00000005671) IP6K3 (ENSCATG00000036617) UQCC2 (ENSCATG00000043597) ITPR3 (ENSCATG00000037656) ENSCATG00000036623 BAK1 (ENSCATG00000038803) ZBTB9 (ENSCATG00000022705) SYNGAP1 (ENSCATG00000038034) PHF1 (ENSCATG00000044603) CUTA (ENSCATG00000032989) KIFC1 (ENSCATG00000020793) DAXX (ENSCATG00000036824) ZBTB22 (ENSCATG00000001104) TAPBP (ENSCATG00000025425) Drill MODERN SPECIES 941 ZNF76 (ENSMLEG00000040578) SCUBE3 (ENSMLEG00000010066) TCP11 (ENSMLEG00000038731) ANKS1A (ENSMLEG00000033172) TAF11 (ENSMLEG00000023789) BLTP3A (ENSMLEG00000029436) ENSMLEG00000033916 ILRUN (ENSMLEG00000036904) SPDEF (ENSMLEG00000043720) PACSIN1 (ENSMLEG00000015133) RPS10 (ENSMLEG00000020492) NUDT3 (ENSMLEG00000041057) ENSMLEG00000017707 ENSMLEG00000041073 ENSMLEG00000042857 GRM4 (ENSMLEG00000039397) ##22 MLN (ENSMLEG00000039698) IP6K3 (ENSMLEG00000039478) ENSMLEG00000012668 ENSMLEG00000009976 ITPR3 (ENSMLEG00000034958) BAK1 (ENSMLEG00000033537) ZBTB9 (ENSMLEG00000011741) SYNGAP1 (ENSMLEG00000029147) CUTA (ENSMLEG00000022508) PHF1 (ENSMLEG00000040290) KIFC1 (ENSMLEG00000030563) DAXX (ENSMLEG00000034686) ZBTB22 (ENSMLEG00000005786) TAPBP (ENSMLEG00000026095) ENSMLEG00000024250 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.c ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.h.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00390000017146.a.m.b ENSGT00390000011871 ENSGT00730000111329.k.a ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00910000146977 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Mas night monkey MODERN SPECIES 1007 ANKS1A (ENSANAG00000033183) TAF11 (ENSANAG00000038167) BLTP3A (ENSANAG00000026155) ENSANAG00000019696 ENSANAG00000020523 ENSANAG00000019816 SPDEF (ENSANAG00000028395) PACSIN1 (ENSANAG00000034324) ENSANAG00000020059 ENSANAG00000023528 ENSANAG00000032790 ENSANAG00000019819 ENSANAG00000026505 ENSANAG00000033169 ENSANAG00000024318 GRM4 (ENSANAG00000036603) ##22 MLN (ENSANAG00000026306) LEMD2 (ENSANAG00000021561) IP6K3 (ENSANAG00000036812) UQCC2 (ENSANAG00000036236) ENSANAG00000035534 ITPR3 (ENSANAG00000037391) BAK1 (ENSANAG00000026323) ZBTB9 (ENSANAG00000015631) SYNGAP1 (ENSANAG00000019519) CUTA (ENSANAG00000034018) PHF1 (ENSANAG00000030035) KIFC1 (ENSANAG00000021191) DAXX (ENSANAG00000029566) ZBTB22 (ENSANAG00000016363) TAPBP (ENSANAG00000021536) Cebidae ANCESTRAL SPECIES 5 ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.c ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r.h.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00390000017146.a.m.b ENSGT00390000011871 ENSGT00730000111329.k.a ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 Cebidae_a ANCESTRAL SPECIES 25 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.c ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00390000014660.r ENSGT00440000034918.q.a.a.a.c.a ENSGT00940000157882 ENSGT00410000025882.b ENSGT00390000017146.a.m.b ENSGT00390000011871 ENSGT00730000111329.k.a ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00390000009448 ENSGT00940000160991 ENSGT00940000159200 ENSGT00940000161403 Capuchin MODERN SPECIES 24 TCP11 (ENSCCAG00000035758) ANKS1A (ENSCCAG00000003428) TAF11 (ENSCCAG00000027206) UHRF1BP1 (ENSCCAG00000028890) ENSCCAG00000022209 ILRUN (ENSCCAG00000018395) ENSCCAG00000029431 SPDEF (ENSCCAG00000032174) PACSIN1 (ENSCCAG00000024229) ENSCCAG00000026459 ENSCCAG00000028065 NUDT3 (ENSCCAG00000024850) ENSCCAG00000029813 ENSCCAG00000033605 ENSCCAG00000024304 GRM4 (ENSCCAG00000024807) ##22 MLN (ENSCCAG00000025534) LEMD2 (ENSCCAG00000007623) IP6K3 (ENSCCAG00000037337) UQCC2 (ENSCCAG00000028094) ITPR3 (ENSCCAG00000029014) BAK1 (ENSCCAG00000037937) ZBTB9 (ENSCCAG00000001949) SYNGAP1 (ENSCCAG00000037957) CUTA (ENSCCAG00000037942) PHF1 (ENSCCAG00000018362) KIFC1 (ENSCCAG00000020819) ENSCCAG00000035320 ZBTB22 (ENSCCAG00000019414) TAPBP (ENSCCAG00000030579) RGL2 (ENSCCAG00000036457) Bolivian squirrel monkey MODERN SPECIES 49 SCUBE3 (ENSSBOG00000033009) TCP11 (ENSSBOG00000025221) ANKS1A (ENSSBOG00000023296) ENSSBOG00000034253 BLTP3A (ENSSBOG00000020282) ENSSBOG00000031528 ENSSBOG00000025658 ILRUN (ENSSBOG00000026233) SPDEF (ENSSBOG00000026084) ENSSBOG00000033685 PACSIN1 (ENSSBOG00000025412) ENSSBOG00000034667 NUDT3 (ENSSBOG00000022644) SMIM29 (ENSSBOG00000030537) HMGA1 (ENSSBOG00000000498) GRM4 (ENSSBOG00000020919) ##22 MLN (ENSSBOG00000028942) ENSSBOG00000021386 IP6K3 (ENSSBOG00000034249) UQCC2 (ENSSBOG00000030900) ITPR3 (ENSSBOG00000021882) ZBTB9 (ENSSBOG00000014339) SYNGAP1 (ENSSBOG00000036152) CUTA (ENSSBOG00000033274) PHF1 (ENSSBOG00000024315) KIFC1 (ENSSBOG00000023255) DAXX (ENSSBOG00000022990) ZBTB22 (ENSSBOG00000018285) TAPBP (ENSSBOG00000031122) RGL2 (ENSSBOG00000031644) PFDN6 (ENSSBOG00000034801) Marmoset DUPLICATION Marmoset MODERN SPECIES 16 SCUBE3 (ENSCJAG00000015443) TCP11 (ENSCJAG00000015429) ANKS1A (ENSCJAG00000034880) TAF11 (ENSCJAG00000015388) BLTP3A (ENSCJAG00000015333) ENSCJAG00000083830 ENSCJAG00000015321 ILRUN (ENSCJAG00000015304) SPDEF (ENSCJAG00000015294) ENSCJAG00000078363 PACSIN1 (ENSCJAG00000015266) ENSCJAG00000015250 NUDT3 (ENSCJAG00000039344) SMIM29 (ENSCJAG00000015241) HMGA1 (ENSCJAG00000039587) GRM4 (ENSCJAG00000084753) ##22 ENSCJAG00000012209 LEMD2 (ENSCJAG00000012200) IP6K3 (ENSCJAG00000044270) UQCC2 (ENSCJAG00000012180) ENSCJAG00000072978 ITPR3 (ENSCJAG00000012111) ENSCJAG00000016047 ENSCJAG00000084010 ENSCJAG00000084888 ZBTB9 (ENSCJAG00000021692) SYNGAP1 (ENSCJAG00000021691) CUTA (ENSCJAG00000021690) PHF1 (ENSCJAG00000021684) KIFC1 (ENSCJAG00000021681) SMIM40 (ENSCJAG00000052899) Marmoset MODERN SPECIES 16 MUCL3 (ENSCJAG00000081019) MUC22 (ENSCJAG00000075478) ENSCJAG00000073912 C6orf15 (ENSCJAG00000019814) CDSN (ENSCJAG00000071715) PSORS1C1 (ENSCJAG00000019806) PSORS1C2 (ENSCJAG00000019811) CCHCR1 (ENSCJAG00000019801) TCF19 (ENSCJAG00000019800) POU5F1 (ENSCJAG00000019789) ENSCJAG00000072004 ENSCJAG00000040131 ENSCJAG00000085978 ENSCJAG00000078623 ENSCJAG00000055749 ENSCJAG00000080501 ##22 ENSCJAG00000071689 ENSCJAG00000062939 ENSCJAG00000064324 ENSCJAG00000081869 ENSCJAG00000070558 ENSCJAG00000074059 ENSCJAG00000077832 ENSCJAG00000057007 ENSCJAG00000078769 ENSCJAG00000085891 ENSCJAG00000073614 ENSCJAG00000072428 ENSCJAG00000078235 ENSCJAG00000035381 ENSCJAG00000086898 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Suina ANCESTRAL SPECIES 17 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00900000143577 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Chacoan peccary MODERN SPECIES 782 ZNF76 (ENSCWAG00000010458) SCUBE3 (ENSCWAG00000010700) TCP11 (ENSCWAG00000010884) ANKS1A (ENSCWAG00000011550) TAF11 (ENSCWAG00000011982) BLTP3A (ENSCWAG00000012054) SNRPC (ENSCWAG00000012141) ILRUN (ENSCWAG00000012228) ENSCWAG00000012314 SPDEF (ENSCWAG00000012352) PACSIN1 (ENSCWAG00000012455) RPS10 (ENSCWAG00000012591) NUDT3 (ENSCWAG00000012650) SMIM29 (ENSCWAG00000012681) HMGA1 (ENSCWAG00000012769) GRM4 (ENSCWAG00000012858) ##22 MLN (ENSCWAG00000005531) LEMD2 (ENSCWAG00000005562) IP6K3 (ENSCWAG00000005636) UQCC2 (ENSCWAG00000005671) ITPR3 (ENSCWAG00000005745) ENSCWAG00000005968 BAK1 (ENSCWAG00000006011) ZBTB9 (ENSCWAG00000006043) SYNGAP1 (ENSCWAG00000006055) CUTA (ENSCWAG00000006165) PHF1 (ENSCWAG00000006199) KIFC1 (ENSCWAG00000006260) SMIM40 (ENSCWAG00000006317) DAXX (ENSCWAG00000006331) ZBTB22 (ENSCWAG00000006346) Pig MODERN SPECIES 15 ZNF76 (ENSSSCG00000001537) SCUBE3 (ENSSSCG00000001536) TCP11 (ENSSSCG00000001535) ANKS1A (ENSSSCG00000001534) TAF11 (ENSSSCG00000001533) BLTP3A (ENSSSCG00000001532) SNRPC (ENSSSCG00000001531) ILRUN (ENSSSCG00000001527) ENSSSCG00000037476 SPDEF (ENSSSCG00000036573) PACSIN1 (ENSSSCG00000027053) RPS10 (ENSSSCG00000060493) NUDT3 (ENSSSCG00000031593) SMIM29 (ENSSSCG00000023160) HMGA1 (ENSSSCG00000032242) GRM4 (ENSSSCG00000001523) ##22 MLN (ENSSSCG00000001521) LEMD2 (ENSSSCG00000001520) IP6K3 (ENSSSCG00000039272) UQCC2 (ENSSSCG00000030668) ITPR3 (ENSSSCG00000001518) ENSSSCG00000001517 ENSSSCG00000001516 ZBTB9 (ENSSSCG00000060402) SYNGAP1 (ENSSSCG00000001513) CUTA (ENSSSCG00000001512) PHF1 (ENSSSCG00000001511) KIFC1 (ENSSSCG00000001510) SMIM40 (ENSSSCG00000059451) DAXX (ENSSSCG00000001509) ZBTB22 (ENSSSCG00000054523) Artiodactyla_a ANCESTRAL SPECIES 19 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Camelidae ANCESTRAL SPECIES 13 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882.p ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Arabian camel MODERN SPECIES 12 ZNF76 (ENSCDRG00005008400) SCUBE3 (ENSCDRG00005008308) TCP11 (ENSCDRG00005008189) ANKS1A (ENSCDRG00005004631) TAF11 (ENSCDRG00005004524) BLTP3A (ENSCDRG00005004384) SNRPC (ENSCDRG00005004283) ENSCDRG00005004250 ILRUN (ENSCDRG00005004197) SPDEF (ENSCDRG00005004153) PACSIN1 (ENSCDRG00005004095) RPS10 (ENSCDRG00005003996) NUDT3 (ENSCDRG00005003951) SMIM29 (ENSCDRG00005003919) ENSCDRG00005003857 GRM4 (ENSCDRG00005003578) ##22 MLN (ENSCDRG00005003452) ENSCDRG00005021748 IP6K3 (ENSCDRG00005021743) UQCC2 (ENSCDRG00005021740) ITPR3 (ENSCDRG00005021737) ENSCDRG00005021734 BAK1 (ENSCDRG00005021730) ZBTB9 (ENSCDRG00005021729) SYNGAP1 (ENSCDRG00005021714) CUTA (ENSCDRG00005021706) PHF1 (ENSCDRG00005021700) KIFC1 (ENSCDRG00005021698) SMIM40 (ENSCDRG00005021695) DAXX (ENSCDRG00005021691) ZBTB22 (ENSCDRG00005021690) Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b.i.a ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Blue whale MODERN SPECIES 2 ZNF76 (ENSBMSG00010009171) SCUBE3 (ENSBMSG00010009186) TCP11 (ENSBMSG00010009227) ANKS1A (ENSBMSG00010009447) TAF11 (ENSBMSG00010009497) BLTP3A (ENSBMSG00010009511) SNRPC (ENSBMSG00010009524) ENSBMSG00010009546 SPDEF (ENSBMSG00010009566) PACSIN1 (ENSBMSG00010009581) ENSBMSG00010009593 NUDT3 (ENSBMSG00010009604) ENSBMSG00010009610 SMIM29 (ENSBMSG00010009615) HMGA1 (ENSBMSG00010009623) GRM4 (ENSBMSG00010009661) ##22 MLN (ENSBMSG00010009751) LEMD2 (ENSBMSG00010009773) IP6K3 (ENSBMSG00010009797) UQCC2 (ENSBMSG00010009808) ITPR3 (ENSBMSG00010009844) ENSBMSG00010009909 BAK1 (ENSBMSG00010009926) ZBTB9 (ENSBMSG00010009949) SYNGAP1 (ENSBMSG00010010019) CUTA (ENSBMSG00010010557) PHF1 (ENSBMSG00010010595) KIFC1 (ENSBMSG00010010611) SMIM40 (ENSBMSG00010010619) DAXX (ENSBMSG00010010625) ZBTB22 (ENSBMSG00010010638) Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00730000110997.l ENSGT00490000043415.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b.i.a ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000153786.e.a.b ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 905 GRM4 (ENSPCTG00005013169) ##22 Sperm whale MODERN SPECIES 9 ZNF76 (ENSPCTG00005017628) SCUBE3 (ENSPCTG00005017357) TCP11 (ENSPCTG00005017060) ANKS1A (ENSPCTG00005016466) TAF11 (ENSPCTG00005016379) UHRF1BP1 (ENSPCTG00005016279) SNRPC (ENSPCTG00005016210) ILRUN (ENSPCTG00005016079) SPDEF (ENSPCTG00005015978) PACSIN1 (ENSPCTG00005015775) RPS10 (ENSPCTG00005015685) NUDT3 (ENSPCTG00005015647) SMIM29 (ENSPCTG00005015565) HMGA1 (ENSPCTG00005015441) ENSPCTG00005015388 ENSPCTG00005015351 ##22 MLN (ENSPCTG00005015154) ENSPCTG00005015136 UQCC2 (ENSPCTG00005015018) ITPR3 (ENSPCTG00005014292) ENSPCTG00005014198 BAK1 (ENSPCTG00005014079) ZBTB9 (ENSPCTG00005014057) ENSPCTG00005014008 SYNGAP1 (ENSPCTG00005012336) CUTA (ENSPCTG00005012115) PHF1 (ENSPCTG00005012052) KIFC1 (ENSPCTG00005012002) ENSPCTG00005011963 RING1 (ENSPCTG00005011923) HSD17B8 (ENSPCTG00005011876) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b.i.a ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000153786.e.a.b ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 Dolphin MODERN SPECIES 159 GRM4 (ENSTTRG00000006581) ##22 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00730000110997.l ENSGT00490000043415.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.a.b ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b.i.a ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Monodontidae ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.a ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b.i.a ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000153786.e.a.b.f ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 Narwhal MODERN SPECIES 310 PPARD (ENSMMNG00015010868) DEF6 (ENSMMNG00015010907) ZNF76 (ENSMMNG00015010934) SCUBE3 (ENSMMNG00015011024) TCP11 (ENSMMNG00015011238) ANKS1A (ENSMMNG00015011370) TAF11 (ENSMMNG00015011433) BLTP3A (ENSMMNG00015011466) SNRPC (ENSMMNG00015011510) ENSMMNG00015011561 SPDEF (ENSMMNG00015011601) PACSIN1 (ENSMMNG00015011632) ENSMMNG00015011658 ENSMMNG00015011673 ENSMMNG00015011685 GRM4 (ENSMMNG00015011724) ##22 MLN (ENSMMNG00015011804) LEMD2 (ENSMMNG00015011822) IP6K3 (ENSMMNG00015011838) UQCC2 (ENSMMNG00015011853) ITPR3 (ENSMMNG00015011896) ENSMMNG00015011970 ENSMMNG00015011979 BAK1 (ENSMMNG00015012006) ZBTB9 (ENSMMNG00015012021) ENSMMNG00015012030 SYNGAP1 (ENSMMNG00015012086) CUTA (ENSMMNG00015012280) PHF1 (ENSMMNG00015012349) KIFC1 (ENSMMNG00015012412) DAXX (ENSMMNG00015012453) Beluga whale MODERN SPECIES 8 DEF6 (ENSDLEG00000020172) ZNF76 (ENSDLEG00000020166) SCUBE3 (ENSDLEG00000020160) TCP11 (ENSDLEG00000020152) ANKS1A (ENSDLEG00000020137) TAF11 (ENSDLEG00000020131) UHRF1BP1 (ENSDLEG00000020115) SNRPC (ENSDLEG00000020111) ENSDLEG00000020109 SPDEF (ENSDLEG00000020105) PACSIN1 (ENSDLEG00000020101) RPS10 (ENSDLEG00000020098) NUDT3 (ENSDLEG00000020096) ENSDLEG00000020091 HMGA1 (ENSDLEG00000020082) GRM4 (ENSDLEG00000020058) ##22 ENSDLEG00000020053 ENSDLEG00000020050 LEMD2 (ENSDLEG00000020047) IP6K3 (ENSDLEG00000020042) UQCC2 (ENSDLEG00000020040) ENSDLEG00000020037 ITPR3 (ENSDLEG00000012814) ENSDLEG00000012378 BAK1 (ENSDLEG00000012340) ZBTB9 (ENSDLEG00000012333) ENSDLEG00000012321 SYNGAP1 (ENSDLEG00000009904) CUTA (ENSDLEG00000009700) PHF1 (ENSDLEG00000009666) KIFC1 (ENSDLEG00000009649) Vaquita MODERN SPECIES 2 PPARD (ENSPSNG00000017498) DEF6 (ENSPSNG00000017425) ZNF76 (ENSPSNG00000017309) SCUBE3 (ENSPSNG00000017135) TCP11 (ENSPSNG00000016862) ANKS1A (ENSPSNG00000016738) TAF11 (ENSPSNG00000016639) BLTP3A (ENSPSNG00000016517) SNRPC (ENSPSNG00000016399) ENSPSNG00000016260 SPDEF (ENSPSNG00000016130) PACSIN1 (ENSPSNG00000015872) ENSPSNG00000015778 NUDT3 (ENSPSNG00000015724) SMIM29 (ENSPSNG00000015615) GRM4 (ENSPSNG00000015059) ##22 MLN (ENSPSNG00000014819) LEMD2 (ENSPSNG00000014756) IP6K3 (ENSPSNG00000014674) UQCC2 (ENSPSNG00000014538) ENSPSNG00000014465 ITPR3 (ENSPSNG00000013739) ENSPSNG00000013586 BAK1 (ENSPSNG00000013464) ZBTB9 (ENSPSNG00000013410) SYNGAP1 (ENSPSNG00000012003) CUTA (ENSPSNG00000011726) KIFC1 (ENSPSNG00000011613) SMIM40 (ENSPSNG00000011575) DAXX (ENSPSNG00000011511) ZBTB22 (ENSPSNG00000011484) Pecora ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Yarkand deer MODERN SPECIES 30 PPARD (ENSCHYG00000010282) DEF6 (ENSCHYG00000010145) ZNF76 (ENSCHYG00000009770) SCUBE3 (ENSCHYG00000009366) ENSCHYG00000009047 ENSCHYG00000009019 ANKS1A (ENSCHYG00000006984) TAF11 (ENSCHYG00000006899) BLTP3A (ENSCHYG00000006803) ENSCHYG00000006706 ILRUN (ENSCHYG00000006613) SPDEF (ENSCHYG00000006557) PACSIN1 (ENSCHYG00000006508) RPS10 (ENSCHYG00000006413) NUDT3 (ENSCHYG00000006377) GRM4 (ENSCHYG00000006106) ##22 ENSCHYG00000006032 LEMD2 (ENSCHYG00000005984) IP6K3 (ENSCHYG00000005950) UQCC2 (ENSCHYG00000005875) ITPR3 (ENSCHYG00000005797) ENSCHYG00000005749 BAK1 (ENSCHYG00000005696) ZBTB9 (ENSCHYG00000005656) SYNGAP1 (ENSCHYG00000005513) CUTA (ENSCHYG00000005349) PHF1 (ENSCHYG00000005145) KIFC1 (ENSCHYG00000005051) SMIM40 (ENSCHYG00000005026) DAXX (ENSCHYG00000005013) ZBTB22 (ENSCHYG00000004990) Percora_a ANCESTRAL SPECIES 12 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Siberian musk deer MODERN SPECIES 355 SCUBE3 (ENSMMSG00000023749) TCP11 (ENSMMSG00000023721) ANKS1A (ENSMMSG00000023673) TAF11 (ENSMMSG00000023653) ENSMMSG00000023647 BLTP3A (ENSMMSG00000023628) SNRPC (ENSMMSG00000023609) ENSMMSG00000023583 SPDEF (ENSMMSG00000023570) PACSIN1 (ENSMMSG00000023558) ENSMMSG00000023552 RPS10 (ENSMMSG00000023536) NUDT3 (ENSMMSG00000023528) SMIM29 (ENSMMSG00000023520) HMGA1 (ENSMMSG00000023513) GRM4 (ENSMMSG00000023487) ##22 MLN (ENSMMSG00000023475) LEMD2 (ENSMMSG00000023465) IP6K3 (ENSMMSG00000023458) ENSMMSG00000023443 ITPR3 (ENSMMSG00000023429) ENSMMSG00000023420 BAK1 (ENSMMSG00000023407) ZBTB9 (ENSMMSG00000023399) SYNGAP1 (ENSMMSG00000023343) CUTA (ENSMMSG00000023317) PHF1 (ENSMMSG00000023287) KIFC1 (ENSMMSG00000023227) SMIM40 (ENSMMSG00000023214) DAXX (ENSMMSG00000023208) ZBTB22 (ENSMMSG00000023203) Bovidae ANCESTRAL SPECIES 13 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Caprinae ANCESTRAL SPECIES 16 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Rambouillet Sheep MODERN SPECIES 12 SCUBE3 (ENSOARG00020021445) TCP11 (ENSOARG00020020829) ANKS1A (ENSOARG00020020350) ENSOARG00020020279 BLTP3A (ENSOARG00020019885) SNRPC (ENSOARG00020019732) ILRUN (ENSOARG00020019597) SPDEF (ENSOARG00020019475) PACSIN1 (ENSOARG00020019350) ENSOARG00020019307 ENSOARG00020019290 NUDT3 (ENSOARG00020019262) ENSOARG00020019241 SMIM29 (ENSOARG00020019174) HMGA1 (ENSOARG00020019128) GRM4 (ENSOARG00020018722) ##22 MLN (ENSOARG00020018668) LEMD2 (ENSOARG00020018611) IP6K3 (ENSOARG00020018550) UQCC2 (ENSOARG00020018431) ITPR3 (ENSOARG00020017959) ENSOARG00020017836 BAK1 (ENSOARG00020017744) ZBTB9 (ENSOARG00020017726) SYNGAP1 (ENSOARG00020014272) CUTA (ENSOARG00020013904) PHF1 (ENSOARG00020013705) KIFC1 (ENSOARG00020013542) SMIM40 (ENSOARG00020013486) DAXX (ENSOARG00020013385) ZBTB22 (ENSOARG00020013358) Goat DUPLICATION Goat MODERN SPECIES 23 GARIN1B (ENSCHIG00000023839) #7 GARIN1A (ENSCHIG00000018576) #8 HILPDA (ENSCHIG00000009991) IMPDH1 (ENSCHIG00000017941) #9 ENSCHIG00000017791 PRRT4 (ENSCHIG00000019622) #10 RBM28 (ENSCHIG00000014146) #11 LEP (ENSCHIG00000019616) #13 SND1 (ENSCHIG00000023390) #14 LRRC4 (ENSCHIG00000006081) #15 PAX4 (ENSCHIG00000014419) #16 FSCN3 (ENSCHIG00000011966) #17 ARF5 (ENSCHIG00000018906) #18 GCC1 (ENSCHIG00000013724) #19 ZNF800 (ENSCHIG00000018562) #20 ENSCHIG00000009077 ##22 ENSCHIG00000021887 ENSCHIG00000011972 POT1 (ENSCHIG00000014866) #24 GPR37 (ENSCHIG00000020618) #26 TMEM229A (ENSCHIG00000011201) ENSCHIG00000015094 #27 ENSCHIG00000020486 ##28 ENSCHIG00000020009 #27 HYAL4 (ENSCHIG00000003866) #28 WASL (ENSCHIG00000016281) #29 LMOD2 (ENSCHIG00000023924) #30 ASB15 (ENSCHIG00000018758) #31 NDUFA5 (ENSCHIG00000014906) #32 IQUB (ENSCHIG00000021401) #34 SLC13A1 (ENSCHIG00000014530) #35 Goat MODERN SPECIES 15 ZNF76 (ENSCHIG00000017284) SCUBE3 (ENSCHIG00000023181) TCP11 (ENSCHIG00000018098) ANKS1A (ENSCHIG00000022852) ENSCHIG00000007802 ENSCHIG00000024450 BLTP3A (ENSCHIG00000025551) ILRUN (ENSCHIG00000019313) SPDEF (ENSCHIG00000017087) PACSIN1 (ENSCHIG00000009071) RPS10 (ENSCHIG00000026089) NUDT3 (ENSCHIG00000024150) ENSCHIG00000008210 SMIM29 (ENSCHIG00000009218) HMGA1 (ENSCHIG00000010976) GRM4 (ENSCHIG00000015235) ##22 MLN (ENSCHIG00000017878) LEMD2 (ENSCHIG00000017649) IP6K3 (ENSCHIG00000021074) UQCC2 (ENSCHIG00000009060) ITPR3 (ENSCHIG00000007818) ENSCHIG00000007482 BAK1 (ENSCHIG00000016258) ZBTB9 (ENSCHIG00000003330) SYNGAP1 (ENSCHIG00000014463) PHF1 (ENSCHIG00000023053) CUTA (ENSCHIG00000012220) KIFC1 (ENSCHIG00000019665) ENSCHIG00000026105 ENSCHIG00000013938 ZBTB22 (ENSCHIG00000003375) Bovinae ANCESTRAL SPECIES 9 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00390000011010.b.s.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.c ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 American bison MODERN SPECIES 3186 SCUBE3 (ENSBBBG00000013778) TCP11 (ENSBBBG00000013808) ANKS1A (ENSBBBG00000013865) TAF11 (ENSBBBG00000013897) BLTP3A (ENSBBBG00000013943) ENSBBBG00000013957 ENSBBBG00000013963 ILRUN (ENSBBBG00000003059) SPDEF (ENSBBBG00000013970) PACSIN1 (ENSBBBG00000013990) RPS10 (ENSBBBG00000003090) ENSBBBG00000007549 NUDT3 (ENSBBBG00000014010) SMIM29 (ENSBBBG00000003105) HMGA1 (ENSBBBG00000003112) GRM4 (ENSBBBG00000014072) ##22 ENSBBBG00000014085 ENSBBBG00000014096 IP6K3 (ENSBBBG00000014104) UQCC2 (ENSBBBG00000014109) ITPR3 (ENSBBBG00000014413) ENSBBBG00000014460 BAK1 (ENSBBBG00000014474) ZBTB9 (ENSBBBG00000014478) SYNGAP1 (ENSBBBG00000001211) CUTA (ENSBBBG00000001096) PHF1 (ENSBBBG00000001027) KIFC1 (ENSBBBG00000001000) ENSBBBG00000000992 SMIM40 (ENSBBBG00000000988) DAXX (ENSBBBG00000000938) Bos ANCESTRAL SPECIES 17 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00390000011010.b.s.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.c ENSGT00940000160955 ENSGT00940000160887.b ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Bos_b ANCESTRAL SPECIES 8 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00390000011010.b.s.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.c ENSGT00940000160955 ENSGT00940000160887.b ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Hybrid Bos Indicus MODERN SPECIES 15 TCP11 (ENSBIXG00005012284) ANKS1A (ENSBIXG00005001303) TAF11 (ENSBIXG00005000356) ENSBIXG00005012377 BLTP3A (ENSBIXG00005012397) SNRPC (ENSBIXG00005012449) ILRUN (ENSBIXG00005000336) SPDEF (ENSBIXG00005012540) PACSIN1 (ENSBIXG00005012624) RPS10 (ENSBIXG00005012752) ENSBIXG00005012769 ENSBIXG00005012779 NUDT3 (ENSBIXG00005012804) SMIM29 (ENSBIXG00005012851) ENSBIXG00005001436 GRM4 (ENSBIXG00005006797) ##22 ENSBIXG00005013091 LEMD2 (ENSBIXG00005013140) IP6K3 (ENSBIXG00005001507) UQCC2 (ENSBIXG00005013203) ITPR3 (ENSBIXG00005013427) ENSBIXG00005013470 BAK1 (ENSBIXG00005001624) ZBTB9 (ENSBIXG00005013532) SYNGAP1 (ENSBIXG00005013877) CUTA (ENSBIXG00005001757) PHF1 (ENSBIXG00005007493) KIFC1 (ENSBIXG00005001822) SMIM40 (ENSBIXG00005014070) DAXX (ENSBIXG00005001833) ZBTB22 (ENSBIXG00005014096) Cow MODERN SPECIES 15 ZNF76 (ENSBTAG00000006170) SCUBE3 (ENSBTAG00000009226) TCP11 (ENSBTAG00000016891) ANKS1A (ENSBTAG00000016890) TAF11 (ENSBTAG00000016887) BLTP3A (ENSBTAG00000009267) SNRPC (ENSBTAG00000024549) ILRUN (ENSBTAG00000034493) SPDEF (ENSBTAG00000021993) PACSIN1 (ENSBTAG00000016124) RPS10 (ENSBTAG00000015598) ENSBTAG00000014274 NUDT3 (ENSBTAG00000019684) SMIM29 (ENSBTAG00000034519) HMGA1 (ENSBTAG00000034529) GRM4 (ENSBTAG00000013632) ##22 MLN (ENSBTAG00000015550) LEMD2 (ENSBTAG00000015538) IP6K3 (ENSBTAG00000033603) UQCC2 (ENSBTAG00000054726) ITPR3 (ENSBTAG00000013245) GGNBP1 (ENSBTAG00000011057) BAK1 (ENSBTAG00000000428) ZBTB9 (ENSBTAG00000038888) SYNGAP1 (ENSBTAG00000020975) CUTA (ENSBTAG00000001635) PHF1 (ENSBTAG00000001634) KIFC1 (ENSBTAG00000001631) DAXX (ENSBTAG00000016830) ZBTB22 (ENSBTAG00000016829) TAPBP (ENSBTAG00000016828) Bos_a ANCESTRAL SPECIES 11 ENSGT00940000156676 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00490000043415.b ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489.c ENSGT00940000160955 ENSGT00940000160887.b ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Domestic yak MODERN SPECIES 16 TCP11 (ENSBGRG00000017298) ANKS1A (ENSBGRG00000017530) TAF11 (ENSBGRG00000018993) BLTP3A (ENSBGRG00000019214) ENSBGRG00000019994 ENSBGRG00000020027 ILRUN (ENSBGRG00000020387) SPDEF (ENSBGRG00000020519) PACSIN1 (ENSBGRG00000020626) RPS10 (ENSBGRG00000020664) NUDT3 (ENSBGRG00000020713) ENSBGRG00000020796 ENSBGRG00000020823 ENSBGRG00000020838 ENSBGRG00000020924 GRM4 (ENSBGRG00000020991) ##22 MLN (ENSBGRG00000021370) LEMD2 (ENSBGRG00000021442) IP6K3 (ENSBGRG00000021534) ENSBGRG00000021558 UQCC2 (ENSBGRG00000021583) ITPR3 (ENSBGRG00000021666) ENSBGRG00000022171 BAK1 (ENSBGRG00000022225) SYNGAP1 (ENSBGRG00000015797) CUTA (ENSBGRG00000016639) PHF1 (ENSBGRG00000016743) KIFC1 (ENSBGRG00000016981) SMIM40 (ENSBGRG00000017145) DAXX (ENSBGRG00000017181) ZBTB22 (ENSBGRG00000017270) Wild yak MODERN SPECIES 3060 ENSBMUG00000002821 ##22 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.a.a.a ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Equus ANCESTRAL SPECIES 10 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.a.a.a ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Horse MODERN SPECIES 12 SCUBE3 (ENSECAG00000015613) TCP11 (ENSECAG00000012071) ANKS1A (ENSECAG00000019918) TAF11 (ENSECAG00000016725) BLTP3A (ENSECAG00000009741) SNRPC (ENSECAG00000026848) ENSECAG00000055666 ENSECAG00000053290 ILRUN (ENSECAG00000000406) SPDEF (ENSECAG00000021717) PACSIN1 (ENSECAG00000013077) RPS10 (ENSECAG00000006430) NUDT3 (ENSECAG00000006023) SMIM29 (ENSECAG00000005108) HMGA1 (ENSECAG00000000734) GRM4 (ENSECAG00000016306) ##22 MLN (ENSECAG00000014006) LEMD2 (ENSECAG00000012707) IP6K3 (ENSECAG00000009417) ENSECAG00000052831 ENSECAG00000031664 ITPR3 (ENSECAG00000007328) BAK1 (ENSECAG00000023902) GGNBP1 (ENSECAG00000004978) ZBTB9 (ENSECAG00000001767) SYNGAP1 (ENSECAG00000020868) CUTA (ENSECAG00000016206) PHF1 (ENSECAG00000001042) KIFC1 (ENSECAG00000024196) DAXX (ENSECAG00000021055) ZBTB22 (ENSECAG00000019536) Donkey MODERN SPECIES 28 ZNF76 (ENSEASG00005021182) SCUBE3 (ENSEASG00005021138) TCP11 (ENSEASG00005032490) ANKS1A (ENSEASG00005021060) TAF11 (ENSEASG00005024329) BLTP3A (ENSEASG00005021010) SNRPC (ENSEASG00005021007) ILRUN (ENSEASG00005021001) SPDEF (ENSEASG00005020995) PACSIN1 (ENSEASG00005020986) ENSEASG00005020975 NUDT3 (ENSEASG00005020969) ENSEASG00005020963 ENSEASG00005036540 HMGA1 (ENSEASG00005025606) GRM4 (ENSEASG00005020947) ##22 MLN (ENSEASG00005020942) LEMD2 (ENSEASG00005024496) IP6K3 (ENSEASG00005020926) UQCC2 (ENSEASG00005020919) ITPR3 (ENSEASG00005020906) ENSEASG00005020902 BAK1 (ENSEASG00005020896) ZBTB9 (ENSEASG00005036178) SYNGAP1 (ENSEASG00005020883) ENSEASG00005020871 PHF1 (ENSEASG00005020866) KIFC1 (ENSEASG00005020860) SMIM40 (ENSEASG00005020856) DAXX (ENSEASG00005020852) ZBTB22 (ENSEASG00005020850) Chiroptera ANCESTRAL SPECIES 3 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Megabat MODERN SPECIES 327 GRM4 (ENSPVAG00000012911) ##22 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Microbat MODERN SPECIES 2510 ENSMLUG00000011097 ##22 Greater horseshoe bat MODERN SPECIES 21 ZNF76 (ENSRFEG00010019335) SCUBE3 (ENSRFEG00010019173) TCP11 (ENSRFEG00010018836) ANKS1A (ENSRFEG00010018694) TAF11 (ENSRFEG00010018509) BLTP3A (ENSRFEG00010018442) ENSRFEG00010018304 ILRUN (ENSRFEG00010018208) SPDEF (ENSRFEG00010018128) PACSIN1 (ENSRFEG00010018068) ENSRFEG00010017910 ENSRFEG00010017884 NUDT3 (ENSRFEG00010017810) SMIM29 (ENSRFEG00010017727) ENSRFEG00010017624 GRM4 (ENSRFEG00010017316) ##22 ENSRFEG00010017224 MLN (ENSRFEG00010017151) LEMD2 (ENSRFEG00010017087) IP6K3 (ENSRFEG00010017031) ENSRFEG00010016929 ITPR3 (ENSRFEG00010016881) ENSRFEG00010016790 BAK1 (ENSRFEG00010016690) ZBTB9 (ENSRFEG00010016671) SYNGAP1 (ENSRFEG00010015951) CUTA (ENSRFEG00010015764) PHF1 (ENSRFEG00010015595) KIFC1 (ENSRFEG00010015527) ENSRFEG00010015490 SMIM40 (ENSRFEG00010015468) Carnivora ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Felidae ANCESTRAL SPECIES 5 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT01000000221634 ENSGT00920000150736 ENSGT00390000009448 Cat MODERN SPECIES 236 SCUBE3 (ENSFCAG00000005888) ENSFCAG00000047092 TCP11 (ENSFCAG00000005886) ANKS1A (ENSFCAG00000005884) TAF11 (ENSFCAG00000022931) BLTP3A (ENSFCAG00000005879) ENSFCAG00000043853 ENSFCAG00000044077 ILRUN (ENSFCAG00000040568) SPDEF (ENSFCAG00000015357) PACSIN1 (ENSFCAG00000015356) RPS10 (ENSFCAG00000015355) NUDT3 (ENSFCAG00000015354) SMIM29 (ENSFCAG00000037728) HMGA1 (ENSFCAG00000044104) GRM4 (ENSFCAG00000015349) ##22 MLN (ENSFCAG00000005275) LEMD2 (ENSFCAG00000005274) IP6K3 (ENSFCAG00000040779) UQCC2 (ENSFCAG00000041370) ITPR3 (ENSFCAG00000013659) GGNBP1 (ENSFCAG00000022517) BAK1 (ENSFCAG00000032638) ZBTB9 (ENSFCAG00000027926) SYNGAP1 (ENSFCAG00000013656) CUTA (ENSFCAG00000013655) PHF1 (ENSFCAG00000013654) KIFC1 (ENSFCAG00000013653) ENSFCAG00000047002 ENSFCAG00000046536 ENSFCAG00000050206 Panthera ANCESTRAL SPECIES 7 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A.k ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT01000000221634 ENSGT00920000150736 ENSGT00390000009448 Tiger MODERN SPECIES 220 DEF6 (ENSPTIG00000007928) ZNF76 (ENSPTIG00000010061) SCUBE3 (ENSPTIG00000011959) TCP11 (ENSPTIG00000015068) ANKS1A (ENSPTIG00000019823) TAF11 (ENSPTIG00000020823) BLTP3A (ENSPTIG00000021124) ENSPTIG00000021867 ILRUN (ENSPTIG00000021985) SPDEF (ENSPTIG00000001491) PACSIN1 (ENSPTIG00000004160) RPS10 (ENSPTIG00000006681) NUDT3 (ENSPTIG00000007366) SMIM29 (ENSPTIG00000008836) HMGA1 (ENSPTIG00000009618) GRM4 (ENSPTIG00000010168) ##22 MLN (ENSPTIG00000013047) Panthera_a ANCESTRAL SPECIES 4 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A.k ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT01000000221634 ENSGT00920000150736 ENSGT00390000009448 leopard MODERN SPECIES 30 ZNF76 (ENSPPRG00000021755) SCUBE3 (ENSPPRG00000023073) TCP11 (ENSPPRG00000003440) ANKS1A (ENSPPRG00000005060) TAF11 (ENSPPRG00000006052) BLTP3A (ENSPPRG00000007237) ENSPPRG00000008647 ENSPPRG00000008899 ILRUN (ENSPPRG00000009052) SPDEF (ENSPPRG00000009413) PACSIN1 (ENSPPRG00000009914) ENSPPRG00000010455 NUDT3 (ENSPPRG00000010831) SMIM29 (ENSPPRG00000011469) HMGA1 (ENSPPRG00000012047) GRM4 (ENSPPRG00000016859) ##22 ENSPPRG00000003780 MLN (ENSPPRG00000005124) LEMD2 (ENSPPRG00000005449) IP6K3 (ENSPPRG00000006044) UQCC2 (ENSPPRG00000006383) ITPR3 (ENSPPRG00000011688) ENSPPRG00000012361 ENSPPRG00000012994 ENSPPRG00000013423 ZBTB9 (ENSPPRG00000020032) SYNGAP1 (ENSPPRG00000022184) CUTA (ENSPPRG00000023270) PHF1 (ENSPPRG00000000222) KIFC1 (ENSPPRG00000000899) DAXX (ENSPPRG00000002274) lion MODERN SPECIES 5 ZNF76 (ENSPLOG00000013876) SCUBE3 (ENSPLOG00000013668) TCP11 (ENSPLOG00000013585) ANKS1A (ENSPLOG00000013144) TAF11 (ENSPLOG00000013051) BLTP3A (ENSPLOG00000012674) ENSPLOG00000012605 SNRPC (ENSPLOG00000012472) ILRUN (ENSPLOG00000012403) SPDEF (ENSPLOG00000012346) PACSIN1 (ENSPLOG00000012303) RPS10 (ENSPLOG00000012151) NUDT3 (ENSPLOG00000012119) SMIM29 (ENSPLOG00000012047) HMGA1 (ENSPLOG00000011984) GRM4 (ENSPLOG00000011735) ##22 MLN (ENSPLOG00000011654) LEMD2 (ENSPLOG00000011596) IP6K3 (ENSPLOG00000011552) UQCC2 (ENSPLOG00000011487) ITPR3 (ENSPLOG00000011420) ENSPLOG00000011334 ENSPLOG00000011229 ZBTB9 (ENSPLOG00000011169) SYNGAP1 (ENSPLOG00000010427) CUTA (ENSPLOG00000010187) PHF1 (ENSPLOG00000010046) KIFC1 (ENSPLOG00000009952) ENSPLOG00000009926 SMIM40 (ENSPLOG00000009910) DAXX (ENSPLOG00000009856) Caniformia ANCESTRAL SPECIES 3 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Canidae ANCESTRAL SPECIES 6 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 Red fox MODERN SPECIES 7 DEF6 (ENSVVUG00000026176) ZNF76 (ENSVVUG00000026174) SCUBE3 (ENSVVUG00000026167) TCP11 (ENSVVUG00000026151) ANKS1A (ENSVVUG00000026149) TAF11 (ENSVVUG00000026146) BLTP3A (ENSVVUG00000026132) ENSVVUG00000026131 CUNH6orf106 (ENSVVUG00000026129) SPDEF (ENSVVUG00000026127) PACSIN1 (ENSVVUG00000026124) RPS10 (ENSVVUG00000026117) NUDT3 (ENSVVUG00000026114) ENSVVUG00000026111 HMGA1 (ENSVVUG00000026109) GRM4 (ENSVVUG00000026106) ##22 MLN (ENSVVUG00000026102) LEMD2 (ENSVVUG00000026101) IP6K3 (ENSVVUG00000026099) ENSVVUG00000026098 ENSVVUG00000025902 ENSVVUG00000025665 BAK1 (ENSVVUG00000025650) ZBTB9 (ENSVVUG00000025646) SYNGAP1 (ENSVVUG00000025640) CUTA (ENSVVUG00000025622) PHF1 (ENSVVUG00000025614) ENSVVUG00000025594 SMIM40 (ENSVVUG00000025592) DAXX (ENSVVUG00000025591) ZBTB22 (ENSVVUG00000025590) Canis_lupus ANCESTRAL SPECIES 11 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.q.b.b ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00940000153117.B.c.a.d.a ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 Dingo MODERN SPECIES 276 ZNF76 (ENSCAFG00020006995) SCUBE3 (ENSCAFG00020006984) TCP11 (ENSCAFG00020006981) ANKS1A (ENSCAFG00020006542) TAF11 (ENSCAFG00020006493) ENSCAFG00020006489 BLTP3A (ENSCAFG00020006319) ENSCAFG00020006308 ILRUN (ENSCAFG00020006292) SPDEF (ENSCAFG00020006289) PACSIN1 (ENSCAFG00020006279) RPS10 (ENSCAFG00020006238) NUDT3 (ENSCAFG00020006231) SMIM29 (ENSCAFG00020006217) HMGA1 (ENSCAFG00020006214) GRM4 (ENSCAFG00020006156) ##22 ENSCAFG00020006128 MLN (ENSCAFG00020006103) LEMD2 (ENSCAFG00020006098) IP6K3 (ENSCAFG00020006095) UQCC2 (ENSCAFG00020006083) ENSCAFG00020005090 ENSCAFG00020003859 ENSCAFG00020003809 BAK1 (ENSCAFG00020003807) ZBTB9 (ENSCAFG00020003798) SYNGAP1 (ENSCAFG00020003455) CUTA (ENSCAFG00020003385) ENSCAFG00020003379 PHF1 (ENSCAFG00020003366) SMIM40 (ENSCAFG00020003364) Dog MODERN SPECIES 3 SCUBE3 (ENSCAFG00845028551) TCP11 (ENSCAFG00845028305) ANKS1A (ENSCAFG00845027911) TAF11 (ENSCAFG00845027786) FKBP1A (ENSCAFG00845027743) BLTP3A (ENSCAFG00845027489) SNRPC (ENSCAFG00845027420) ENSCAFG00845027377 ILRUN (ENSCAFG00845027291) SPDEF (ENSCAFG00845027202) PACSIN1 (ENSCAFG00845026967) RPS10 (ENSCAFG00845026833) NUDT3 (ENSCAFG00845026783) ENSCAFG00845026693 HMGA1 (ENSCAFG00845026595) GRM4 (ENSCAFG00845026257) ##22 ENSCAFG00845026155 MLN (ENSCAFG00845026089) LEMD2 (ENSCAFG00845025993) IP6K3 (ENSCAFG00845025943) UQCC2 (ENSCAFG00845025862) ITPR3 (ENSCAFG00845023922) ENSCAFG00845023632 BAK1 (ENSCAFG00845023547) ENSCAFG00845023466 ZBTB9 (ENSCAFG00845023405) SYNGAP1 (ENSCAFG00845022368) CUTA (ENSCAFG00845022043) PHF1 (ENSCAFG00845021851) KIFC1 (ENSCAFG00845021754) SMIM40 (ENSCAFG00845021695) Caniformia_b ANCESTRAL SPECIES 6 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Mustelinae ANCESTRAL SPECIES 65 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078.`c ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00940000164565 ENSGT00920000150736 ENSGT00390000009448 Ferret MODERN SPECIES 318 ZNF76 (ENSMPUG00000003522) SCUBE3 (ENSMPUG00000003499) TCP11 (ENSMPUG00000003416) ANKS1A (ENSMPUG00000003245) ENSMPUG00000003243 TAF11 (ENSMPUG00000003241) BLTP3A (ENSMPUG00000003236) SNRPC (ENSMPUG00000003210) ILRUN (ENSMPUG00000003190) SPDEF (ENSMPUG00000003167) PACSIN1 (ENSMPUG00000003139) ENSMPUG00000003117 NUDT3 (ENSMPUG00000003111) SMIM29 (ENSMPUG00000003102) ENSMPUG00000003098 GRM4 (ENSMPUG00000003090) ##22 MLN (ENSMPUG00000003080) LEMD2 (ENSMPUG00000003061) ENSMPUG00000003058 IP6K3 (ENSMPUG00000003052) UQCC2 (ENSMPUG00000003032) ENSMPUG00000002462 ENSMPUG00000002458 ENSMPUG00000002455 BAK1 (ENSMPUG00000002438) ZBTB9 (ENSMPUG00000018789) SYNGAP1 (ENSMPUG00000002431) CUTA (ENSMPUG00000002420) PHF1 (ENSMPUG00000002414) KIFC1 (ENSMPUG00000002409) DAXX (ENSMPUG00000002405) American mink MODERN SPECIES 258 ZNF76 (ENSNVIG00000011700) SCUBE3 (ENSNVIG00000011783) ENSNVIG00000011809 TCP11 (ENSNVIG00000011822) ANKS1A (ENSNVIG00000011961) TAF11 (ENSNVIG00000012017) BLTP3A (ENSNVIG00000012042) SNRPC (ENSNVIG00000012123) ILRUN (ENSNVIG00000012137) SPDEF (ENSNVIG00000012148) PACSIN1 (ENSNVIG00000012200) RPS10 (ENSNVIG00000012259) NUDT3 (ENSNVIG00000012317) ENSNVIG00000012331 HMGA1 (ENSNVIG00000012367) GRM4 (ENSNVIG00000012391) ##22 MLN (ENSNVIG00000012447) LEMD2 (ENSNVIG00000012480) IP6K3 (ENSNVIG00000012514) UQCC2 (ENSNVIG00000012538) ITPR3 (ENSNVIG00000012548) ENSNVIG00000012687 BAK (ENSNVIG00000012694) ZBTB9 (ENSNVIG00000012705) SYNGAP1 (ENSNVIG00000012712) CUTA (ENSNVIG00000012780) PHF1 (ENSNVIG00000012814) ENSNVIG00000012872 SMIM40 (ENSNVIG00000012878) DAXX (ENSNVIG00000012888) ZBTB22 (ENSNVIG00000012910) Ursidae ANCESTRAL SPECIES 37 ENSGT00950000183017.b.b.a.b ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Giant Panda MODERN SPECIES 15 DEF6 (ENSAMEG00000000719) ZNF76 (ENSAMEG00000000752) SCUBE3 (ENSAMEG00000000790) TCP11 (ENSAMEG00000000846) ANKS1A (ENSAMEG00000000884) TAF11 (ENSAMEG00000000920) BLTP3A (ENSAMEG00000000933) SNRPC (ENSAMEG00000000963) ILRUN (ENSAMEG00000000971) SPDEF (ENSAMEG00000000981) PACSIN1 (ENSAMEG00000000988) ENSAMEG00000001047 NUDT3 (ENSAMEG00000001052) SMIM29 (ENSAMEG00000001058) HMGA1 (ENSAMEG00000001061) GRM4 (ENSAMEG00000001063) ##22 ENSAMEG00000001099 IP6K3 (ENSAMEG00000001109) UQCC2 (ENSAMEG00000029955) ITPR3 (ENSAMEG00000001124) ENSAMEG00000001355 ENSAMEG00000001363 ZBTB9 (ENSAMEG00000019731) SYNGAP1 (ENSAMEG00000001379) CUTA (ENSAMEG00000001407) PHF1 (ENSAMEG00000001427) KIFC1 (ENSAMEG00000001458) SMIM40 (ENSAMEG00000030691) DAXX (ENSAMEG00000001484) ZBTB22 (ENSAMEG00000019741) TAPBP (ENSAMEG00000001518) Ursus ANCESTRAL SPECIES 53 ENSGT00940000160911 ENSGT00940000153185.a.a.b ENSGT00940000161869 ENSGT00940000155806 ENSGT00390000013228.e.a ENSGT00600000084428.a ENSGT00730000110997.l ENSGT00730000110997.k.a ENSGT00490000043415 ENSGT00940000157549 ENSGT00950000182973.a.c.a ENSGT00440000034918.r ENSGT00940000157882 ENSGT00390000011871 ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ##22 ENSGT00390000000489 ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00920000150736 ENSGT00390000009448 ENSGT00940000160991 Polar bear MODERN SPECIES 184 PPARD (ENSUMAG00000010402) DEF6 (ENSUMAG00000010421) ZNF76 (ENSUMAG00000010449) SCUBE3 (ENSUMAG00000010513) TCP11 (ENSUMAG00000010533) ANKS1A (ENSUMAG00000010559) TAF11 (ENSUMAG00000010818) BLTP3A (ENSUMAG00000010824) SNRPC (ENSUMAG00000010869) ILRUN (ENSUMAG00000010872) PACSIN1 (ENSUMAG00000010881) RPS10 (ENSUMAG00000010901) NUDT3 (ENSUMAG00000010905) ENSUMAG00000010909 HMGA1 (ENSUMAG00000010910) GRM4 (ENSUMAG00000010915) ##22 MLN (ENSUMAG00000010935) LEMD2 (ENSUMAG00000010937) IP6K3 (ENSUMAG00000010952) UQCC2 (ENSUMAG00000010960) ITPR3 (ENSUMAG00000011124) ENSUMAG00000012167 ENSUMAG00000012169 ZBTB9 (ENSUMAG00000012186) SYNGAP1 (ENSUMAG00000012214) CUTA (ENSUMAG00000012326) PHF1 (ENSUMAG00000012332) KIFC1 (ENSUMAG00000012334) DAXX (ENSUMAG00000012343) ZBTB22 (ENSUMAG00000012348) TAPBP (ENSUMAG00000012349) American black bear DUPLICATION American black bear MODERN SPECIES 5414 ENSUAMG00000022365 ##22 American black bear MODERN SPECIES 1846 GRM4 (ENSUAMG00000022918) ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Hedgehog MODERN SPECIES 2400 GRM4 (ENSEEUG00000008673) ##22 Common shrew MODERN SPECIES 1758 ENSSARG00000004074 ##22 Cyclostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.a.a ##22 Hagfish DUPLICATION Hagfish MODERN SPECIES 1034 ENSEBUG00000012074 ENSEBUG00000007782 ENSEBUG00000003837 ENSEBUG00000017066 ENSEBUG00000001550 ENSEBUG00000008011 ##22 ENSEBUG00000007824 ##22 Hagfish MODERN SPECIES 1300 ENSEBUG00000001553 ##22 Vertebrata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b ##22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b ##22 Euteleostomi ANCESTRAL SPECIES 152 ENSGT00940000159563 ENSGT00940000159128 ENSGT00940000166196 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00950000182827.B ENSGT00940000161689 ENSGT00940000158963 ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000012692 Actinopterygii DUPLICATION Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES 136 ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00940000155877 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 Neopterygii ANCESTRAL SPECIES 131 ENSGT00950000183005.a.a ENSGT00730000111044 ENSGT00940000155877 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 Osteoglossocephalai ANCESTRAL SPECIES 116 ENSGT00940000159128 ENSGT00940000161383.d.b ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000161689 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00720000108868 Clupeocephala ANCESTRAL SPECIES 149 ENSGT00940000155317.a.a ENSGT00940000156963.a.b ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000169444 ENSGT00600000085663 ENSGT00990000203541.b ENSGT00940000159563 ENSGT00940000166313.b ENSGT00940000159128 ENSGT00940000161383.d.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00940000155056.b Otomorpha ANCESTRAL SPECIES 83 ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000161689 ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b.h Clupeiformes ANCESTRAL SPECIES 80 ENSGT00940000159128 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b.v ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b.h ENSGT00720000108868 Denticle herring MODERN SPECIES 1 ENSDCDG00000013911 mecp2 (ENSDCDG00000013979) ENSDCDG00000014265 FGD1 (ENSDCDG00000014316) ENSDCDG00000014841 tfe3a (ENSDCDG00000014843) mbd1a (ENSDCDG00000014854) ENSDCDG00000014860 abcd1 (ENSDCDG00000014869) PLXNB3 (ENSDCDG00000015001) SRPK3 (ENSDCDG00000020351) tsr2 (ENSDCDG00000021609) CDK16 (ENSDCDG00000021622) comta (ENSDCDG00000023828) abt1 (ENSDCDG00000023830) grm6a (ENSDCDG00000023855) ##22 USP11 (ENSDCDG00000026692) zgc:86609 (ENSDCDG00000030234) uxt (ENSDCDG00000030254) ELK1 (ENSDCDG00000030257) ENSDCDG00000030264 otud5a (ENSDCDG00000030287) pim2 (ENSDCDG00000030420) slc35a2 (ENSDCDG00000030422) bcap31 (ENSDCDG00000030429) slc6a8 (ENSDCDG00000030465) ENSDCDG00000032001 plxna3 (ENSDCDG00000032471) ptpn18 (ENSDCDG00000033724) gripap1 (ENSDCDG00000033747) kcnd1 (ENSDCDG00000033776) Atlantic herring MODERN SPECIES 20 ENSCHAG00000018158 HDAC6 (ENSCHAG00000016727) ENSCHAG00000016693 cdk20 (ENSCHAG00000016474) hcfc1b (ENSCHAG00000015879) tfe3a (ENSCHAG00000015756) FGD1 (ENSCHAG00000015518) ENSCHAG00000015450 abcd1 (ENSCHAG00000014730) PLXNB3 (ENSCHAG00000010819) SRPK3 (ENSCHAG00000010403) tsr2 (ENSCHAG00000010385) CDK16 (ENSCHAG00000006163) comta (ENSCHAG00000006027) abt1 (ENSCHAG00000006011) grm6a (ENSCHAG00000003869) ##22 USP11 (ENSCHAG00000001346) zgc:86609 (ENSCHAG00000000813) uxt (ENSCHAG00000000675) ENSCHAG00000000504 ENSCHAG00000000466 ENSCHAG00000000439 ENSCHAG00000000376 ENSCHAG00000000355 ENSCHAG00000000334 SNPH (ENSCHAG00000000315) sdcbp2 (ENSCHAG00000000281) fkbp1ab (ENSCHAG00000000250) ENSCHAG00000000212 fbxo44.3 (ENSCHAG00000026714) cdc42 (ENSCHAG00000026712) Otophysi ANCESTRAL SPECIES 127 ENSGT00940000155615.i.b ENSGT00940000163873.c.a ENSGT01030000235233 ENSGT00600000085663 ENSGT00990000203541.b ENSGT00940000159563 ENSGT00940000166313.b ENSGT00940000159128 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b.h ENSGT00720000108868 Cyprinoidei ANCESTRAL SPECIES 32 ENSGT00940000155615.i.b ENSGT00940000163873.c.a.o ENSGT01030000235233 ENSGT00600000085663 ENSGT00990000203541.b ENSGT00940000159563 ENSGT00940000166313.b ENSGT00940000159128 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00940000175166 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b.h Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 134 ENSGT00940000160502.j ENSGT00530000063687.b.b.b.t ENSGT00390000003348 ENSGT00940000159438.hb.b.a ENSGT00940000157503.i.a.d ENSGT00940000158685.t.b ENSGT00730000111044.s ENSGT00940000169444 ENSGT00940000154102.b.a.b.e ENSGT00950000182955.a.b.a.i ENSGT01020000230394.e.a.a.b.a.b.d ENSGT00940000157877.b.g.b ENSGT00390000012692.o ENSGT00940000156963.a.b.b ENSGT00940000155317.a.a.i.a ENSGT01030000234648.a.b.a.b.a.a.a ##22 ENSGT00940000160485.u ENSGT00390000005780.a.b ENSGT00390000018078.q ENSGT00940000157571.a.a ENSGT00940000165528.d ENSGT00940000158963.b.b.b ENSGT00940000163427.c.ab.b ENSGT00940000175166 ENSGT00950000182827.B.c ENSGT00390000011863.c.o.a ENSGT00940000155869.c ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a.c ENSGT00940000164289.a.a ENSGT00390000006665.b.h Cyprininae_a ANCESTRAL SPECIES 258 ENSGT00940000157877.b.g.b ENSGT00390000012692.o ENSGT00940000156963.a.b.b ENSGT00940000155317.a.a.i.a ENSGT00390000002062.o ENSGT01030000234648.a.b.a.b.a.a.a ##22 ENSGT00940000160485.u ENSGT00390000005780.a.b ENSGT00390000018078.q ENSGT00940000157571.a.a ENSGT00940000165528.d ENSGT00940000158963.b.b.b ENSGT00940000163427.c.ab.b ENSGT00940000175166 ENSGT00950000182827.B.c ENSGT00390000011863.c.o.a ENSGT00940000155869.c ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a.c ENSGT00940000164289.a.a ENSGT00390000006665.b.h Common carp reference MODERN SPECIES 23 hcfc1b (ENSCCRG00000002147) ENSCCRG00000021365 mecp2 (ENSCCRG00000062551) ENSCCRG00000021358 ENSCCRG00000021342 tfe3a (ENSCCRG00000025498) zgc:113363 (ENSCCRG00000025731) cxxc1a (ENSCCRG00000025486) ENSCCRG00000025735 abcd1 (ENSCCRG00000025744) ENSCCRG00000030157 SRPK3 (ENSCCRG00000080303) ENSCCRG00000069480 comta (ENSCCRG00000052635) ENSCCRG00000052636 grm6a (ENSCCRG00000018975) ##22 ENSCCRG00000043673 uxt (ENSCCRG00000054398) zgc:86609 (ENSCCRG00000011959) ENSCCRG00000064227 ENSCCRG00000071159 otud5a (ENSCCRG00000020046) pim2 (ENSCCRG00000071894) ENSCCRG00000071095 slc35a2 (ENSCCRG00000035398) bcap31 (ENSCCRG00000035634) slc6a8 (ENSCCRG00000035629) ENSCCRG00000051042 plxna3 (ENSCCRG00000051129) ptpn18 (ENSCCRG00000059436) ENSCCRG00000079483 Golden-line barbel MODERN SPECIES 311 ENSSGRG00000043541 ENSSGRG00000042665 tsr2 (ENSSGRG00000042640) CDK16 (ENSSGRG00000042522) comta (ENSSGRG00000042520) abt1 (ENSSGRG00000042519) grm6a (ENSSGRG00000041831) ##22 USP11 (ENSSGRG00000041815) zgc:86609 (ENSSGRG00000041492) uxt (ENSSGRG00000041488) ENSSGRG00000041487 ENSSGRG00000041486 otud5a (ENSSGRG00000041484) pim2 (ENSSGRG00000041480) ENSSGRG00000041477 ENSSGRG00000041476 slc35a2 (ENSSGRG00000041475) bcap31 (ENSSGRG00000041454) slc6a8 (ENSSGRG00000041450) ENSSGRG00000041426 plxna3 (ENSSGRG00000041403) ptpn18 (ENSSGRG00000041399) Goldfish DUPLICATION Goldfish MODERN SPECIES 48 ENSCARG00000013822 mecp2 (ENSCARG00000013811) ENSCARG00000013801 FGD1 (ENSCARG00000013577) tfe3a (ENSCARG00000013560) zgc:113363 (ENSCARG00000013546) cxxc1a (ENSCARG00000013188) mbd1a (ENSCARG00000013159) ENSCARG00000013152 abcd1 (ENSCARG00000012822) ENSCARG00000011771 SRPK3 (ENSCARG00000011511) tsr2 (ENSCARG00000011484) CDK16 (ENSCARG00000011331) comta (ENSCARG00000011300) grm6a (ENSCARG00000009693) ##22 USP11 (ENSCARG00000009214) zgc:86609 (ENSCARG00000009187) uxt (ENSCARG00000009182) ENSCARG00000009172 ENSCARG00000009168 otud5a (ENSCARG00000009129) pim2 (ENSCARG00000009106) ENSCARG00000009101 slc35a2 (ENSCARG00000009092) bcap31 (ENSCARG00000009086) slc6a8 (ENSCARG00000007521) ENSCARG00000007441 plxna3 (ENSCARG00000006861) ptpn18 (ENSCARG00000006767) MON1B (ENSCARG00000006753) Goldfish MODERN SPECIES 2001 grm6a (ENSCARG00000039475) ##22 USP11 (ENSCARG00000038964) zgc:86609 (ENSCARG00000038811) uxt (ENSCARG00000038796) Cyprininae ANCESTRAL SPECIES 111 ENSGT00940000159438.hb.a ENSGT00940000157503.i.a.c ENSGT00940000158685.t.a ENSGT00730000111044.t ENSGT00940000154102.b.a.b.f ENSGT00950000182955.a.b.a.j ENSGT01020000230394.e.a.a.b.a.b.c ENSGT00940000157877.b.g.a ENSGT00390000012692.p ENSGT00940000156963.a.b.a ENSGT00940000155317.a.a.i.b ENSGT00390000002062.p ENSGT00390000002062.o ENSGT01030000234648.a.b.a.b.a.a.b ##22 ENSGT00940000160485.v ENSGT00390000005780.a.a ENSGT00390000018078.r ENSGT00940000157571.b ENSGT00940000165528.c ENSGT00940000158963.b.b.a ENSGT00940000163427.c.ab.a ENSGT00950000182827.B.d ENSGT00390000011863.c.p ENSGT00940000155869.d ENSGT01050000244850.A.a.o.a.d ENSGT00940000164289.a.b ENSGT00720000108868.d ENSGT00940000155472.a.a.b ENSGT00950000183145.A.b.b.b Cyprininae_a ANCESTRAL SPECIES 111 ENSGT00530000063687.b.b.b.s ENSGT00940000159438.hb.b.b ENSGT00940000159438.hb.a ENSGT00940000157503.i.a.c ENSGT00940000158685.t.a ENSGT00730000111044.t ENSGT00940000169444 ENSGT00940000154102.b.a.b.f ENSGT00950000182955.a.b.a.j ENSGT01020000230394.e.a.a.b.a.b.c ENSGT00940000157877.b.g.a ENSGT00390000012692.p ENSGT00940000156963.a.b.a ENSGT00940000155317.a.a.i.b ENSGT00390000002062.p ENSGT01030000234648.a.b.a.b.a.a.b ##22 ENSGT00940000160485.v ENSGT00390000005780.a.a ENSGT00390000018078.r ENSGT00940000157571.b ENSGT00940000165528.c ENSGT00940000158963.b.b.a ENSGT00950000182827.B.d ENSGT00390000011863.c.p ENSGT00940000155869.d ENSGT01050000244850.A.a.o.a.d ENSGT00940000164289.a.b ENSGT00720000108868.d ENSGT00940000155472.a.a.b ENSGT00950000183145.A.b.b.b ENSGT00940000166296.b Common carp reference MODERN SPECIES 17 cdk20 (ENSCCRG00000010099) ENSCCRG00000002126 mecp2 (ENSCCRG00000076063) ENSCCRG00000002107 tfe3a (ENSCCRG00000034728) zgc:113363 (ENSCCRG00000034733) cxxc1a (ENSCCRG00000034737) mbd1a (ENSCCRG00000065415) ENSCCRG00000035218 abcd1 (ENSCCRG00000035216) ENSCCRG00000030238 SRPK3 (ENSCCRG00000025752) ENSCCRG00000067741 comta (ENSCCRG00000025764) abt1 (ENSCCRG00000025767) grm6a (ENSCCRG00000044676) ##22 ENSCCRG00000042969 zgc:86609 (ENSCCRG00000075696) uxt (ENSCCRG00000068398) ENSCCRG00000058800 ENSCCRG00000019150 ENSCCRG00000069233 otud5a (ENSCCRG00000077446) slc35a2 (ENSCCRG00000081173) slc6a8 (ENSCCRG00000033069) ENSCCRG00000033025 plxna3 (ENSCCRG00000066638) ptpn18 (ENSCCRG00000005561) gripap1 (ENSCCRG00000005400) kcnd1 (ENSCCRG00000053667) ENSCCRG00000014243 Golden-line barbel MODERN SPECIES 63 hcfc1b (ENSSGRG00000033403) ENSSGRG00000033459 mecp2 (ENSSGRG00000033460) FGD1 (ENSSGRG00000033479) tfe3a (ENSSGRG00000033483) zgc:113363 (ENSSGRG00000033484) cxxc1a (ENSSGRG00000033487) ENSSGRG00000033490 abcd1 (ENSSGRG00000033492) PLXNB3 (ENSSGRG00000033604) SRPK3 (ENSSGRG00000034455) tsr2 (ENSSGRG00000035040) CDK16 (ENSSGRG00000035043) comta (ENSSGRG00000035052) abt1 (ENSSGRG00000035053) grm6a (ENSSGRG00000035056) ##22 USP11 (ENSSGRG00000035063) zgc:86609 (ENSSGRG00000036052) uxt (ENSSGRG00000036086) ENSSGRG00000036088 ENSSGRG00000036090 otud5a (ENSSGRG00000036096) slc35a2 (ENSSGRG00000036136) bcap31 (ENSSGRG00000036138) slc6a8 (ENSSGRG00000036141) plxna3 (ENSSGRG00000036305) ptpn18 (ENSSGRG00000036417) gripap1 (ENSSGRG00000036425) kcnd1 (ENSSGRG00000036535) ENSSGRG00000036537 pim1 (ENSSGRG00000036538) Goldfish DUPLICATION Goldfish MODERN SPECIES 1857 FGD1 (ENSCARG00000054608) tfe3a (ENSCARG00000054238) zgc:113363 (ENSCARG00000054198) cxxc1a (ENSCARG00000054070) ENSCARG00000053994 ENSCARG00000053939 PLXNB3 (ENSCARG00000053158) SRPK3 (ENSCARG00000053120) ENSCARG00000053076 CDK16 (ENSCARG00000050894) comta (ENSCARG00000050828) abt1 (ENSCARG00000050817) grm6a (ENSCARG00000050523) ##22 USP11 (ENSCARG00000049254) zgc:86609 (ENSCARG00000049008) uxt (ENSCARG00000048972) ENSCARG00000048957 ENSCARG00000048949 otud5a (ENSCARG00000047780) pim2 (ENSCARG00000047698) slc35a2 (ENSCARG00000047678) bcap31 (ENSCARG00000047662) slc6a8 (ENSCARG00000047363) ENSCARG00000047350 plxna3 (ENSCARG00000046997) ptpn18 (ENSCARG00000046896) gripap1 (ENSCARG00000046818) kcnd1 (ENSCARG00000046801) Goldfish MODERN SPECIES 3122 CDK16 (ENSCARG00000070092) comta (ENSCARG00000070089) abt1 (ENSCARG00000070087) ENSCARG00000070086 ##22 Zebrafish MODERN SPECIES 23 ENSDARG00000025949 mecp2 (ENSDARG00000014218) FGD1 (ENSDARG00000100402) tfe3a (ENSDARG00000098903) zgc:113363 (ENSDARG00000101206) cxxc1a (ENSDARG00000101996) mbd1a (ENSDARG00000101205) ENSDARG00000012449 abcd1 (ENSDARG00000074876) ENSDARG00000032990 SRPK3 (ENSDARG00000005916) tsr2 (ENSDARG00000005772) CDK16 (ENSDARG00000032072) comta (ENSDARG00000015337) abt1 (ENSDARG00000043666) grm6a (ENSDARG00000017742) ##22 ENSDARG00000076303 zgc:86609 (ENSDARG00000029479) uxt (ENSDARG00000019339) ELK1 (ENSDARG00000078066) ENSDARG00000077112 otud5a (ENSDARG00000059006) pim2 (ENSDARG00000059001) ENSDARG00000093019 slc35a2 (ENSDARG00000058990) bcap31 (ENSDARG00000044972) slc6a8 (ENSDARG00000043646) ENSDARG00000043648 plxna3 (ENSDARG00000007172) ptpn18 (ENSDARG00000006308) MON1B (ENSDARG00000035686) Characiphysae ANCESTRAL SPECIES 41 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000161689 ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b.h Channel catfish DUPLICATION Channel catfish MODERN SPECIES 10 dus4l (ENSIPUG00000014454) Cog5 (ENSIPUG00000014494) pus7l (ENSIPUG00000014589) asun (ENSIPUG00000014623) Ube2h (ENSIPUG00000014680) stk38l (ENSIPUG00000014712) nrf1 (ENSIPUG00000014867) TNPO3 (ENSIPUG00000014979) ENSIPUG00000015151 foxl2b (ENSIPUG00000015173) pik3cg (ENSIPUG00000015194) nampt (ENSIPUG00000015223) Sypl1 (ENSIPUG00000015265) ENSIPUG00000015291 ZNF800 (ENSIPUG00000015296) #20 ENSIPUG00000015300 ##22 ENSIPUG00000015319 lrtm2 (ENSIPUG00000015332) ENSIPUG00000015353 ENSIPUG00000015359 ENSIPUG00000015373 ENSIPUG00000015382 ENSIPUG00000015386 ENSIPUG00000015390 mrpl42 (ENSIPUG00000015395) cacna1c (ENSIPUG00000015419) ENSIPUG00000015490 pphln1 (ENSIPUG00000015505) GRM8 (ENSIPUG00000015581) #22 ENSIPUG00000015604 ENSIPUG00000015682 Channel catfish MODERN SPECIES 24 FGD1 (ENSIPUG00000012986) tfe3a (ENSIPUG00000012922) zgc:113363 (ENSIPUG00000012710) ntpcr (ENSIPUG00000012672) CXXC1 (ENSIPUG00000012610) mbd1a (ENSIPUG00000012547) CCDC120 (ENSIPUG00000012472) ABCD1 (ENSIPUG00000012423) PLXNB3 (ENSIPUG00000012302) srpk3 (ENSIPUG00000012200) tsr2 (ENSIPUG00000012170) cdk16 (ENSIPUG00000012114) comt (ENSIPUG00000012075) comt (ENSIPUG00000012058) abt1 (ENSIPUG00000012026) grm6a (ENSIPUG00000011995) ##22 usp11 (ENSIPUG00000011912) zgc:86609 (ENSIPUG00000011878) Uxt (ENSIPUG00000011857) elk1 (ENSIPUG00000011841) LRRN1 (ENSIPUG00000011826) otud5 (ENSIPUG00000011788) pim2 (ENSIPUG00000011752) slc35a2 (ENSIPUG00000011733) bcap31 (ENSIPUG00000011713) Slc6a8 (ENSIPUG00000011661) ENSIPUG00000011620 plxna3 (ENSIPUG00000011528) Ptpn18 (ENSIPUG00000011444) Gripap1 (ENSIPUG00000011217) kcnd1 (ENSIPUG00000011155) Characiphysae_b ANCESTRAL SPECIES 134 ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c Electric eel MODERN SPECIES 462 ENSEEEG00000014927 comta (ENSEEEG00000014928) abt1 (ENSEEEG00000014948) grm6a (ENSEEEG00000014949) ##22 USP11 (ENSEEEG00000014951) zgc:86609 (ENSEEEG00000014956) uxt (ENSEEEG00000014959) ENSEEEG00000014960 ENSEEEG00000014961 otud5a (ENSEEEG00000014962) pim2 (ENSEEEG00000014982) slc35a2 (ENSEEEG00000014984) bcap31 (ENSEEEG00000014986) slc6a8 (ENSEEEG00000015001) ENSEEEG00000015767 ENSEEEG00000015770 Characoidei ANCESTRAL SPECIES 150 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00940000158685 ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 Mexicana tetra MODERN SPECIES 21 ENSAMXG00000034063 RHOBTB2 (ENSAMXG00000007255) ido1 (ENSAMXG00000039501) ENSAMXG00000032719 ENSAMXG00000040673 stc1 (ENSAMXG00000042529) ENSAMXG00000031945 nkx3-1 (ENSAMXG00000031436) slc25a37 (ENSAMXG00000036375) ENSAMXG00000036785 entpd4 (ENSAMXG00000030989) chmp7 (ENSAMXG00000015495) lgi3 (ENSAMXG00000015522) fgfr1a (ENSAMXG00000015547) abt1 (ENSAMXG00000043918) grm6a (ENSAMXG00000016722) ##22 rgl1 (ENSAMXG00000016687) colgalt2b (ENSAMXG00000041867) zgc:92140 (ENSAMXG00000039623) EDEM3 (ENSAMXG00000041285) npl (ENSAMXG00000043524) sec22bb (ENSAMXG00000016628) ENSAMXG00000035566 ENSAMXG00000036885 slc35a3a (ENSAMXG00000032366) FAM78B (ENSAMXG00000016600) foxd2 (ENSAMXG00000016595) trabd2b (ENSAMXG00000016593) ENSAMXG00000016590 ENSAMXG00000036131 ENSAMXG00000016569 Red-bellied piranha MODERN SPECIES 319 grm6a (ENSPNAG00000002966) ##22 ENSPNAG00000013894 gpd1a (ENSPNAG00000007036) asic1a (ENSPNAG00000013947) si:ch211-255g12.6 (ENSPNAG00000013964) wdr13 (ENSPNAG00000014009) haus5 (ENSPNAG00000014095) fzr1a (ENSPNAG00000014157) dohh (ENSPNAG00000014171) smim24 (ENSPNAG00000014188) ENSPNAG00000014233 MFSD12 (ENSPNAG00000014267) csnk1g2b (ENSPNAG00000003073) mknk2b (ENSPNAG00000014554) mob3a (ENSPNAG00000014581) zap70 (ENSPNAG00000014606) Euteleosteomorpha ANCESTRAL SPECIES 144 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a Protacanthopterygii ANCESTRAL SPECIES 135 ENSGT00940000165736 ENSGT00950000183119.a.b ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b ENSGT00940000155343.a.a ENSGT00940000155343.b ENSGT00940000158400 ENSGT00940000158156.b.a ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00720000108868 ENSGT00940000155472.a.a Salmoninae ANCESTRAL SPECIES 213 ENSGT00940000165736 ENSGT00950000183119.a.b ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b.f ENSGT00940000155343.a.a ENSGT00940000158400 ENSGT00940000158156.b.a.f ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.r ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485.k ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b.d ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c ENSGT01050000244850.A.a.o.a.e ENSGT00940000164289.a.d ENSGT00720000108868.e ENSGT00940000155472.a.a.c Salmoninae_a ANCESTRAL SPECIES 26 ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b.f ENSGT00940000155343.a.a ENSGT00940000155343.b ENSGT00940000158400 ENSGT00940000158156.b.a.f ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.r ENSGT00990000211545.I ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485.k ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b.d ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT01050000244850.A.a.o.a.f ENSGT00940000164289.a.c ENSGT00720000108868.f ENSGT00940000155472.a.a.d ENSGT00950000183145.A.b.b Salmo ANCESTRAL SPECIES 4 ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b.f ENSGT00940000155343.a.a ENSGT00940000155343.b ENSGT00940000158400 ENSGT00940000158156.b.a.f ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.r ENSGT00990000211545.I ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485.k ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b.d ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c.f ENSGT01050000244850.A.a.o.a.f ENSGT00940000164289.a.c ENSGT00720000108868.f ENSGT00940000155472.a.a.d Atlantic salmon MODERN SPECIES 4 ENSSSAG00000075682 ENSSSAG00000099746 ENSSSAG00000103451 kcnd3 (ENSSSAG00000115399) ENSSSAG00000122210 ddx20 (ENSSSAG00000076815) ENSSSAG00000076805 b4galt3 (ENSSSAG00000076803) bgn (ENSSSAG00000076802) ENSSSAG00000107407 ENSSSAG00000076726 tsr2 (ENSSSAG00000076713) ENSSSAG00000076397 comta (ENSSSAG00000076380) abt1 (ENSSSAG00000093372) grm6a (ENSSSAG00000117835) ##22 ENSSSAG00000074048 POB (ENSSSAG00000074008) uxt (ENSSSAG00000073999) ENSSSAG00000073997 ENSSSAG00000073995 otud5a (ENSSSAG00000073981) pim2 (ENSSSAG00000090531) slc35a2 (ENSSSAG00000073975) bcap31 (ENSSSAG00000073971) slc6a8 (ENSSSAG00000073066) ENSSSAG00000099811 plxna3 (ENSSSAG00000117654) ptpn18 (ENSSSAG00000072816) ENSSSAG00000089679 gripap1 (ENSSSAG00000072624) River trout MODERN SPECIES 23 cttnbp2nlb (ENSSTUG00000045686) ENSSTUG00000045749 ENSSTUG00000047092 ENSSTUG00000047096 KCND3 (ENSSTUG00000047097) ddx20 (ENSSTUG00000047111) atp6ap1lb (ENSSTUG00000047237) B4GALT3 (ENSSTUG00000047239) bgnb (ENSSTUG00000047245) SRPK3 (ENSSTUG00000047250) tsr2 (ENSSTUG00000047276) CDK16 (ENSSTUG00000047329) comta (ENSSTUG00000048934) ENSSTUG00000048941 abt1 (ENSSTUG00000048946) grm6a (ENSSTUG00000048975) ##22 USP11 (ENSSTUG00000049221) zgc:86609 (ENSSTUG00000049556) uxt (ENSSTUG00000049561) ENSSTUG00000049564 ENSSTUG00000049565 otud5a (ENSSTUG00000049567) pim2 (ENSSTUG00000049580) slc35a2 (ENSSTUG00000049583) bcap31 (ENSSTUG00000049584) slc6a8 (ENSSTUG00000049592) ENSSTUG00000049669 plxna3 (ENSSTUG00000049704) ENSSTUG00000050050 ENSSTUG00000050053 ptpn18 (ENSSTUG00000050057) Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00950000183119.a.b ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b.e.a ENSGT00940000155343.a.a ENSGT00940000158400 ENSGT00940000158156.b.a.f ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.r ENSGT00990000211545.I ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485.k ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b.d ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT01050000244850.A.a.o.a.f ENSGT00940000164289.a.c ENSGT00720000108868.f ENSGT00940000155472.a.a.d ENSGT00950000183145.A.b.b Rainbow trout MODERN SPECIES 7 kcnd3 (ENSOMYG00000054558) ENSOMYG00000052073 ENSOMYG00000050077 ddx20 (ENSOMYG00000033653) ENSOMYG00000070426 ENSOMYG00000033995 ENSOMYG00000034082 ENSOMYG00000054349 ENSOMYG00000034378 tsr2 (ENSOMYG00000034541) ENSOMYG00000034674 ENSOMYG00000049357 comta (ENSOMYG00000034879) ENSOMYG00000034885 abt1 (ENSOMYG00000034903) grm6a (ENSOMYG00000058364) ##22 ENSOMYG00000035226 zgc:86609 (ENSOMYG00000038259) uxt (ENSOMYG00000038408) ENSOMYG00000038424 ENSOMYG00000038448 otud5a (ENSOMYG00000038621) pim2 (ENSOMYG00000070574) slc35a2 (ENSOMYG00000039080) bcap31 (ENSOMYG00000039088) ENSOMYG00000054617 ENSOMYG00000049752 ENSOMYG00000072926 slc6a8 (ENSOMYG00000039300) ENSOMYG00000069042 ENSOMYG00000065897 Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00950000183119.a.b ENSGT00950000182852.B.b ENSGT00950000182958.b.a.a.b.e.a ENSGT00940000155343.a.a ENSGT00940000158400 ENSGT00940000158156.b.a.f ENSGT00940000158549 ENSGT00940000155311.C.c ENSGT00940000164248.b.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.r ENSGT00990000211545.I ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485.k ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b.d ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT01050000244850.A.a.o.a.f ENSGT00940000164289.a.c ENSGT00720000108868.f ENSGT00940000155472.a.a.d ENSGT00950000183145.A.b.b ENSGT00940000153394.c.a.f Coho salmon MODERN SPECIES 16 ENSOKIG00005015407 kcnd3 (ENSOKIG00005015538) ENSOKIG00005015555 ENSOKIG00005015561 ddx20 (ENSOKIG00005015610) atp6ap1lb (ENSOKIG00005015875) B4GALT3 (ENSOKIG00005015885) bgnb (ENSOKIG00005015897) ENSOKIG00005015901 SRPK3 (ENSOKIG00005015985) tsr2 (ENSOKIG00005016773) CDK16 (ENSOKIG00005016915) comta (ENSOKIG00005018638) ENSOKIG00005018646 abt1 (ENSOKIG00005018653) grm6a (ENSOKIG00005018665) ##22 USP11 (ENSOKIG00005018744) zgc:86609 (ENSOKIG00005018996) uxt (ENSOKIG00005019052) ENSOKIG00005019068 ENSOKIG00005019078 ENSOKIG00005019082 otud5a (ENSOKIG00005019120) slc35a2 (ENSOKIG00005019267) bcap31 (ENSOKIG00005019304) slc6a8 (ENSOKIG00005019356) plxna3 (ENSOKIG00005019794) ptpn18 (ENSOKIG00005022692) gripap1 (ENSOKIG00005022809) ENSOKIG00005023012 pim1 (ENSOKIG00005023060) Chinook salmon MODERN SPECIES 14 ENSOTSG00005003218 snai1b (ENSOTSG00005003220) samhd1 (ENSOTSG00005003231) ENSOTSG00005003620 KBTBD12 (ENSOTSG00005003623) ENSOTSG00005003626 parapinopsina (ENSOTSG00005003628) ENSOTSG00005003630 ENSOTSG00005003633 SRPK3 (ENSOTSG00005003664) tsr2 (ENSOTSG00005007514) CDK16 (ENSOTSG00005007515) comta (ENSOTSG00005007911) ENSOTSG00005007912 abt1 (ENSOTSG00005007913) grm6a (ENSOTSG00005007914) ##22 USP11 (ENSOTSG00005007925) zgc:86609 (ENSOTSG00005011090) uxt (ENSOTSG00005011091) ENSOTSG00005011092 ENSOTSG00005011094 otud5a (ENSOTSG00005011095) slc35a2 (ENSOTSG00005011435) bcap31 (ENSOTSG00005011436) slc6a8 (ENSOTSG00005011442) plxna3 (ENSOTSG00005012512) ptpn18 (ENSOTSG00005012519) gripap1 (ENSOTSG00005012537) kcnd1 (ENSOTSG00005013857) ENSOTSG00005013859 prpf6 (ENSOTSG00005013868) Huchen MODERN SPECIES 658 ENSHHUG00000003651 SRPK3 (ENSHHUG00000003667) tsr2 (ENSHHUG00000004082) CDK16 (ENSHHUG00000004095) comta (ENSHHUG00000004607) abt1 (ENSHHUG00000004632) grm6a (ENSHHUG00000004662) ##22 USP11 (ENSHHUG00000005084) zgc:86609 (ENSHHUG00000005253) uxt (ENSHHUG00000005290) ENSHHUG00000005322 ENSHHUG00000005325 otud5a (ENSHHUG00000005328) pim2 (ENSHHUG00000005361) slc35a2 (ENSHHUG00000005374) bcap31 (ENSHHUG00000005381) slc6a8 (ENSHHUG00000005394) plxna3 (ENSHHUG00000005822) ptpn18 (ENSHHUG00000007415) gripap1 (ENSHHUG00000007452) Northern pike MODERN SPECIES 11 kcnd3 (ENSELUG00000010238) ENSELUG00000025745 ddx20 (ENSELUG00000010260) ENSELUG00000010271 ENSELUG00000033720 B4GALT3 (ENSELUG00000010296) bgnb (ENSELUG00000001635) ENSELUG00000030150 ENSELUG00000007723 tsr2 (ENSELUG00000007768) ENSELUG00000027361 CDK16 (ENSELUG00000007866) comta (ENSELUG00000029048) abt1 (ENSELUG00000007974) ENSELUG00000025738 grm6a (ENSELUG00000004674) ##22 pim2 (ENSELUG00000004786) otud5a (ENSELUG00000005004) ENSELUG00000005075 ENSELUG00000005052 uxt (ENSELUG00000001230) ENSELUG00000026224 zgc:86609 (ENSELUG00000010388) ENSELUG00000010401 USP11 (ENSELUG00000010436) slc6a8 (ENSELUG00000010479) slc35a2 (ENSELUG00000001521) BAP31 (ENSELUG00000032776) parapinopsina (ENSELUG00000004654) rpf1 (ENSELUG00000001464) LRTM1 (ENSELUG00000010099) Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.a ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.a ##22 Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00990000210258 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Cichlidae ANCESTRAL SPECIES ENSGT00940000158675.a ENSGT00940000158313.a.b ENSGT00940000154955.b ENSGT01050000244882.b.c.b.b ENSGT00950000182989.D.a.a.b ENSGT00530000063168.a.a.b ENSGT00940000155170 ENSGT00600000085659.b ENSGT01030000234941.c ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT01050000244882.b.c.b.b ENSGT00950000182989.D.a.a.b ENSGT00530000063168.a.a.b ENSGT00940000155170 ENSGT00600000085659.b ENSGT00950000182888.a.a.a.f ENSGT01030000234941.d ENSGT00940000154285.a.a.c.a.e.a ENSGT01030000234941.c ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.f Nile tilapia MODERN SPECIES 12 ENSONIG00000031199 ENSONIG00000034031 ENSONIG00000033251 ENSONIG00000004087 ENSONIG00000014581 ENSONIG00000030712 ENSONIG00000040125 ENSONIG00000041257 ENSONIG00000039995 ENSONIG00000033261 ENSONIG00000000730 CCM2L (ENSONIG00000000732) CDK16 (ENSONIG00000000736) rad51c (ENSONIG00000042488) abt1 (ENSONIG00000000750) grm6a (ENSONIG00000000755) ##22 tsr2 (ENSONIG00000000763) SRPK3 (ENSONIG00000000769) PLXNB3 (ENSONIG00000000783) abcd1 (ENSONIG00000000793) ENSONIG00000000800 ENSONIG00000000801 ENSONIG00000000806 ENSONIG00000040360 ENSONIG00000030751 FGD1 (ENSONIG00000000817) TFE3 (ENSONIG00000000820) ENSONIG00000038680 ENSONIG00000038372 cxxc1a (ENSONIG00000000828) HDAC6 (ENSONIG00000000836) Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00530000063168.a.a.b ENSGT00940000155170 ENSGT00600000085659.b.db ENSGT00600000085659.b.cb.a ENSGT00950000182888.a.a.a.f ENSGT01030000234941.d.a ENSGT00940000154285.a.a.c.a.e.a ENSGT00940000156038.a.a.d.a.i.a ENSGT01030000234941.c ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.f Haplochromini ANCESTRAL SPECIES 20 ENSGT00530000063168.a.a.b ENSGT00940000155170 ENSGT00600000085659.b.db ENSGT00600000085659.b.cb.b ENSGT00950000182888.a.a.a.f ENSGT01030000234941.d.a ENSGT00940000154285.a.a.c.a.e.a ENSGT00940000156038.a.a.d.a.i.a ENSGT01030000234941.c ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.f Burton s mouthbrooder MODERN SPECIES 396 ENSHBUG00000021135 CCM2L (ENSHBUG00000021124) xkr7b (ENSHBUG00000021111) CDK16 (ENSHBUG00000021082) abt1 (ENSHBUG00000021041) rad51c (ENSHBUG00000021032) grm6a (ENSHBUG00000021021) ##22 tsr2 (ENSHBUG00000020989) SRPK3 (ENSHBUG00000020976) PLXNB3 (ENSHBUG00000020962) abcd1 (ENSHBUG00000020860) ENSHBUG00000020813 ENSHBUG00000020787 ENSHBUG00000020760 ENSHBUG00000020716 ENSHBUG00000020689 FGD1 (ENSHBUG00000020661) TFE3 (ENSHBUG00000020599) zgc:113363 (ENSHBUG00000020240) cxxc1a (ENSHBUG00000020227) HDAC6 (ENSHBUG00000020208) ENSHBUG00000000790 Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00600000085659.b.db.d ENSGT00600000085659.b.cb.a ENSGT00950000182888.a.a.a.f ENSGT01030000234941.d.a ENSGT00950000183145.B.a.a.b.f.e.b.a.b ENSGT00940000154285.a.a.c.a.e.a ENSGT00940000156038.a.a.d.a.i.a ENSGT01030000234941.c.a ENSGT01030000234941.c.b ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.f P. nyererei MODERN SPECIES 505 ENSPNYG00000019761 ENSPNYG00000019784 ENSPNYG00000019798 ENSPNYG00000019807 CABLES2 (ENSPNYG00000019819) ENSPNYG00000019834 ENSPNYG00000019847 xkr7b (ENSPNYG00000019858) CDK16 (ENSPNYG00000019878) abt1 (ENSPNYG00000019939) rad51c (ENSPNYG00000019952) grm6a (ENSPNYG00000019962) ##22 tsr2 (ENSPNYG00000019995) ENSPNYG00000020006 SRPK3 (ENSPNYG00000020031) ENSPNYG00000020080 abcd1 (ENSPNYG00000020284) ENSPNYG00000020321 ENSPNYG00000020329 ENSPNYG00000020350 ENSPNYG00000020387 ENSPNYG00000020399 FGD1 (ENSPNYG00000020422) TFE3 (ENSPNYG00000020458) CXXC1 (ENSPNYG00000020491) HDAC6 (ENSPNYG00000020695) ENSPNYG00000020743 Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000155170 ENSGT00600000085659.b.db.d ENSGT00600000085659.b.cb.b ENSGT00950000182888.a.a.a.f ENSGT00950000183145.B.a.a.b.f.e.b.a.b ENSGT00940000154285.a.a.c.a.e.a ENSGT00940000156038.a.a.d.a.i.a ENSGT01030000234941.c.a ENSGT01030000234941.c.b ENSGT00400000022086.b.a.a ENSGT00390000016168.b ENSGT01070000253766.B.f.a ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g.f Zebra mbuna MODERN SPECIES 1103 ENSMZEG00005026715 ENSMZEG00005026716 ENSMZEG00005026717 ENSMZEG00005026718 ENSMZEG00005026721 ENSMZEG00005026733 ENSMZEG00005026734 ENSMZEG00005026736 ENSMZEG00005026737 CABLES2 (ENSMZEG00005026739) CCM2L (ENSMZEG00005026740) xkr7b (ENSMZEG00005026742) CDK16 (ENSMZEG00005026744) abt1 (ENSMZEG00005026748) rad51c (ENSMZEG00005026750) grm6a (ENSMZEG00005026751) ##22 tsr2 (ENSMZEG00005026752) SRPK3 (ENSMZEG00005026753) ENSMZEG00005026754 abcd1 (ENSMZEG00005026756) ENSMZEG00005026757 ENSMZEG00005026759 ENSMZEG00005026760 ENSMZEG00005026761 ENSMZEG00005026762 FGD1 (ENSMZEG00005026763) TFE3 (ENSMZEG00005026764) ENSMZEG00005026765 cxxc1a (ENSMZEG00005026766) HDAC6 (ENSMZEG00005026767) ENSMZEG00005026768 Eastern happy MODERN SPECIES 12 ENSACLG00000015000 ENSACLG00000014701 ENSACLG00000014688 ENSACLG00000014681 ENSACLG00000014651 ENSACLG00000014647 ENSACLG00000014623 CABLES2 (ENSACLG00000014603) ENSACLG00000014595 ENSACLG00000014591 ENSACLG00000014577 xkr7b (ENSACLG00000014562) CDK16 (ENSACLG00000014389) abt1 (ENSACLG00000014378) rad51c (ENSACLG00000014360) grm6a (ENSACLG00000014320) ##22 tsr2 (ENSACLG00000014269) ENSACLG00000014259 SRPK3 (ENSACLG00000014229) ENSACLG00000013976 ENSACLG00000013969 abcd1 (ENSACLG00000013880) ENSACLG00000013776 ENSACLG00000013767 ENSACLG00000013689 ENSACLG00000013679 ENSACLG00000013662 FGD1 (ENSACLG00000013633) TFE3 (ENSACLG00000013619) ENSACLG00000013610 cxxc1a (ENSACLG00000013463) Lyretail cichlid MODERN SPECIES 397 ENSNBRG00000007485 ENSNBRG00000007515 ENSNBRG00000007534 ENSNBRG00000007543 ENSNBRG00000007547 ENSNBRG00000007573 ENSNBRG00000007589 xkr7b (ENSNBRG00000007600) ENSNBRG00000007616 rad51c (ENSNBRG00000007632) GRM6 (ENSNBRG00000007667) ##22 tsr2 (ENSNBRG00000007965) ENSNBRG00000007974 SRPK3 (ENSNBRG00000007989) PLXNB3 (ENSNBRG00000008035) abcd1 (ENSNBRG00000008264) ENSNBRG00000008309 ENSNBRG00000008338 ENSNBRG00000008359 mecp2 (ENSNBRG00000008411) ENSNBRG00000008488 FGD1 (ENSNBRG00000008517) TFE3 (ENSNBRG00000008566) ENSNBRG00000008595 cxxc1a (ENSNBRG00000008635) HDAC6 (ENSNBRG00000008791) Midas cichlid MODERN SPECIES 129 CCM2L (ENSACIG00000005002) xkr7b (ENSACIG00000004985) ENSACIG00000004977 CDK16 (ENSACIG00000004946) abt1 (ENSACIG00000004935) rad51c (ENSACIG00000004925) grm6a (ENSACIG00000004895) ##22 tsr2 (ENSACIG00000004880) ENSACIG00000004868 SRPK3 (ENSACIG00000004837) PLXNB3 (ENSACIG00000004668) abcd1 (ENSACIG00000004632) ENSACIG00000004604 ENSACIG00000004586 ENSACIG00000004554 ENSACIG00000004533 ENSACIG00000004515 FGD1 (ENSACIG00000004445) TFE3 (ENSACIG00000004421) cxxc1a (ENSACIG00000004393) HDAC6 (ENSACIG00000004282) ENSACIG00000004183 Pomacentridae ANCESTRAL SPECIES 94 ENSGT00940000159563.j ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000175919 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00950000182846.a.a.a.a.a.a ENSGT00940000156478 ENSGT00390000007823 ENSGT00940000159151 ENSGT00940000160318.c.a ENSGT00940000157078 ENSGT01100000263518.B.b.a.a ##26 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2454 SRPK3 (ENSSPAG00000008057) abt1 (ENSSPAG00000008031) rad51c (ENSSPAG00000008017) ENSSPAG00000008011 ##22 GRM6 (ENSSPAG00000007981) ##22 ENSSPAG00000007968 CDK16 (ENSSPAG00000007921) dnase1l1 (ENSSPAG00000007887) Bicolor damselfish MODERN SPECIES 2454 SRPK3 (ENSSPAG00000008057) abt1 (ENSSPAG00000008031) rad51c (ENSSPAG00000008017) ENSSPAG00000008011 ##22 GRM6 (ENSSPAG00000007981) ##22 ENSSPAG00000007968 CDK16 (ENSSPAG00000007921) dnase1l1 (ENSSPAG00000007887) Pomacentridae_A ANCESTRAL SPECIES 92 ENSGT00990000203541.b ENSGT00940000159563.j ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00950000182846.a.a.a.a.a.a ENSGT00940000156478 ENSGT00390000007823 ENSGT00940000159151 ENSGT00940000160318.c.a ENSGT00940000157078 ENSGT01100000263518.B.b.a.a ##26 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a Amphiprion ANCESTRAL SPECIES 119 ENSGT00990000203541.b ENSGT00940000159563.j ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000167532 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00950000182846.a.a.a.a.a.a ENSGT00940000156478 ENSGT00390000007823 ENSGT00940000159151 ENSGT00940000160318.c.a ENSGT00940000157078 ENSGT01100000263518.B.b.a.a ##26 ENSGT00940000159657.d.h ENSGT00940000157212.A ENSGT00940000164481.b.b ENSGT00940000155472.a.a ENSGT00720000108868 ENSGT00940000164289.a Clown anemonefish MODERN SPECIES 1471 bag6l (ENSAOCG00000015405) ENSAOCG00000015428 atat1 (ENSAOCG00000015480) c1galt1a (ENSAOCG00000015514) ENSAOCG00000015523 ENSAOCG00000015575 rpa3 (ENSAOCG00000015606) umad1 (ENSAOCG00000001916) glcci1a (ENSAOCG00000015650) ENSAOCG00000015701 ENSAOCG00000002151 ENSAOCG00000015787 ENSAOCG00000015804 abt1 (ENSAOCG00000015817) rad51c (ENSAOCG00000015828) GRM6 (ENSAOCG00000015884) ##22 tsr2 (ENSAOCG00000015893) Orange clownfish MODERN SPECIES 22 ENSAPEG00000024110 ENSAPEG00000024105 ENSAPEG00000024096 FGD1 (ENSAPEG00000024070) ENSAPEG00000024051 mecp2 (ENSAPEG00000023997) ENSAPEG00000023917 ENSAPEG00000023882 abcd1 (ENSAPEG00000023814) ENSAPEG00000023797 ENSAPEG00000023723 PLXNB3 (ENSAPEG00000023646) SRPK3 (ENSAPEG00000023629) abt1 (ENSAPEG00000023617) rad51c (ENSAPEG00000023593) GRM6 (ENSAPEG00000023556) ##22 tsr2 (ENSAPEG00000023549) CDK16 (ENSAPEG00000023524) dnase1l1 (ENSAPEG00000023457) hm13 (ENSAPEG00000023409) mrgbp (ENSAPEG00000023381) SULF2 (ENSAPEG00000023292) ENSAPEG00000023270 ENSAPEG00000023263 ENSAPEG00000023201 GPR37L1 (ENSAPEG00000023190) ##26 arl8a (ENSAPEG00000023154) ENSAPEG00000023142 ENSAPEG00000023050 kcnd1 (ENSAPEG00000023041) gripap1 (ENSAPEG00000023013) Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 2246 GRM6 (ENSAPOG00000004192) ##22 ENSAPOG00000004150 CDK16 (ENSAPOG00000004056) dnase1l1 (ENSAPOG00000004021) Spiny chromis MODERN SPECIES 2954 ENSAPOG00000020928 abt1 (ENSAPOG00000020914) rad51c (ENSAPOG00000000730) ENSAPOG00000020883 ##22 Atherinomorphae ANCESTRAL SPECIES 50 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Oryzias ANCESTRAL SPECIES 58 ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00940000164771.b ENSGT00520000055578.a.a.c ENSGT00940000156364.a.b ENSGT00940000156650.j ENSGT00390000018621 ENSGT00940000156358 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000166923 Oryzias_a ANCESTRAL SPECIES 77 ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00940000164771.b ENSGT00520000055578.a.a.c ENSGT00940000156364.a.b ENSGT00940000156650.j ENSGT00390000018621 ENSGT00940000156358 ENSGT00490000043329.a.a.a.vb.a ENSGT00940000166923 Chinese medaka MODERN SPECIES 1068 abt1 (ENSOSIG00000001102) rad51c (ENSOSIG00000001097) GRM6 (ENSOSIG00000000965) ##22 ENSOSIG00000000944 Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000024242 ENSORLG00000019788 suv39h1b (ENSORLG00000019802) gpr173 (ENSORLG00000019811) ENSORLG00000025857 ENSORLG00000025224 trappc6b (ENSORLG00000019824) ENSORLG00000019878 ENSORLG00000019895 VPS13D (ENSORLG00000019952) ENSORLG00000019972 ENSORLG00000030327 ENSORLG00000027136 abt1 (ENSORLG00000024030) rad51c (ENSORLG00000020003) ENSORLG00000020032 ##22 tsr2 (ENSORLG00000022662) ENSORLG00000025612 ENSORLG00000025217 SRPK3 (ENSORLG00000020076) ENSORLG00000020098 ENSORLG00000028233 abcd1 (ENSORLG00000020113) ENSORLG00000029784 ENSORLG00000028017 mecp2 (ENSORLG00000028917) ENSORLG00000020120 ENSORLG00000027477 asxl1 (ENSORLG00000020127) ENSORLG00000020139 atp6ap1a (ENSORLG00000020153) Oryzias_b ANCESTRAL SPECIES 48 ENSGT00940000153544.a.i.b ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000159128 ENSGT00940000164755.A.b ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00940000164771.b ENSGT00520000055578.a.a.c ENSGT00940000156364.a.b ENSGT00940000157506.f Indian medaka MODERN SPECIES 23 ENSOMEG00000012103 ENSOMEG00000012072 uxt (ENSOMEG00000012056) cdk20 (ENSOMEG00000012028) ENSOMEG00000011995 ENSOMEG00000011973 ENSOMEG00000011964 sypa (ENSOMEG00000011916) ENSOMEG00000011782 ENSOMEG00000011758 CXXC1 (ENSOMEG00000011705) ENSOMEG00000011663 FGD1 (ENSOMEG00000011622) abt1 (ENSOMEG00000011593) rad51c (ENSOMEG00000011578) GRM6 (ENSOMEG00000011505) ##22 tsr2 (ENSOMEG00000011483) ENSOMEG00000011469 SRPK3 (ENSOMEG00000011459) ENSOMEG00000011405 ENSOMEG00000011387 ENSOMEG00000011376 abcd1 (ENSOMEG00000011346) ENSOMEG00000011274 ENSOMEG00000011232 mecp2 (ENSOMEG00000011209) ENSOMEG00000011185 ENSOMEG00000011176 ENSOMEG00000011157 asxl1 (ENSOMEG00000011144) ENSOMEG00000011037 Javanese ricefish MODERN SPECIES 21 dennd2da (ENSOJAG00000007970) stk38a (ENSOJAG00000007879) ENSOJAG00000007805 uxt (ENSOJAG00000007790) cdk20 (ENSOJAG00000007754) ENSOJAG00000007688 SYP (ENSOJAG00000005032) ENSOJAG00000005018 ENSOJAG00000004339 CXXC1 (ENSOJAG00000004282) TFE3 (ENSOJAG00000004250) ENSOJAG00000004234 FGD1 (ENSOJAG00000004025) abt1 (ENSOJAG00000003999) ENSOJAG00000003947 grm6a (ENSOJAG00000003817) ##22 ENSOJAG00000003748 SRPK3 (ENSOJAG00000003070) abcd1 (ENSOJAG00000002175) ENSOJAG00000002120 mecp2 (ENSOJAG00000002090) ENSOJAG00000002049 asxl1 (ENSOJAG00000002014) ENSOJAG00000001739 ENSOJAG00000001498 ccn5 (ENSOJAG00000001457) ENSOJAG00000001451 ENSOJAG00000001445 ENSOJAG00000001437 GPR37L1 (ENSOJAG00000001435) ##26 arl8a (ENSOJAG00000001330) Cyprinodontiformes ANCESTRAL SPECIES 46 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Aplocheiloidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.a ##22 Mangrove rivulus MODERN SPECIES 1147 GRM6 (ENSKMAG00000003277) ##22 Cyprinodontoidei ANCESTRAL SPECIES 57 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Poeciliinae ANCESTRAL SPECIES 45 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Poecilia ANCESTRAL SPECIES 79 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g NAME_6 ANCESTRAL SPECIES 397 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 3174 CDK16 (ENSPLAG00000016676) abt1 (ENSPLAG00000016669) rad51c (ENSPLAG00000016665) ENSPLAG00000016659 ##22 grm6a (ENSPLAG00000016644) ##22 Sailfin molly MODERN SPECIES 3174 CDK16 (ENSPLAG00000016676) abt1 (ENSPLAG00000016669) rad51c (ENSPLAG00000016665) ENSPLAG00000016659 ##22 grm6a (ENSPLAG00000016644) ##22 Amazon molly MODERN SPECIES 890 ENSPFOG00000011271 CDK16 (ENSPFOG00000011288) abt1 (ENSPFOG00000011510) rad51c (ENSPFOG00000011542) grm6a (ENSPFOG00000011555) ##22 tsr2 (ENSPFOG00000011824) SRPK3 (ENSPFOG00000022695) PLXNB3 (ENSPFOG00000011896) abcd1 (ENSPFOG00000012630) Guppy MODERN SPECIES 9 CDK16 (ENSPREG00000013083) abt1 (ENSPREG00000013063) rad51c (ENSPREG00000013050) grm6a (ENSPREG00000013021) ##22 tsr2 (ENSPREG00000013009) SRPK3 (ENSPREG00000012974) ENSPREG00000012919 ENSPREG00000012909 ENSPREG00000012865 abcd1 (ENSPREG00000012807) ENSPREG00000012777 ENSPREG00000012748 ENSPREG00000012629 mecp2 (ENSPREG00000012585) ENSPREG00000012549 FGD1 (ENSPREG00000012524) ENSPREG00000012514 ENSPREG00000012507 cxxc1a (ENSPREG00000012472) Platyfish MODERN SPECIES snx21 (ENSXMAG00000003313) ENSXMAG00000003316 ENSXMAG00000003317 edem2 (ENSXMAG00000029629) ENSXMAG00000028440 ENSXMAG00000029059 ENSXMAG00000029701 ENSXMAG00000028679 ENSXMAG00000027647 ENSXMAG00000024715 ENSXMAG00000027352 ENSXMAG00000021516 CDK16 (ENSXMAG00000003320) abt1 (ENSXMAG00000003341) rad51c (ENSXMAG00000003344) grm6a (ENSXMAG00000003346) ##22 tsr2 (ENSXMAG00000024827) SRPK3 (ENSXMAG00000003381) PLXNB3 (ENSXMAG00000003393) abcd1 (ENSXMAG00000003466) ENSXMAG00000024465 ENSXMAG00000021127 ENSXMAG00000003511 ENSXMAG00000021429 ENSXMAG00000025932 FGD1 (ENSXMAG00000003528) ENSXMAG00000003547 ENSXMAG00000021186 cxxc1a (ENSXMAG00000013043) ENSXMAG00000013014 ENSXMAG00000006655 NAME_4 ANCESTRAL SPECIES 162 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Sheepshead minnow MODERN SPECIES 140 DENND11 (ENSCVAG00000001738) ENSCVAG00000001751 slc26a5 (ENSCVAG00000001760) psmc2 (ENSCVAG00000001766) dnajc2 (ENSCVAG00000001780) pmpcb (ENSCVAG00000001788) phax (ENSCVAG00000001794) kcnc2 (ENSCVAG00000001799) ENSCVAG00000001803 cmah (ENSCVAG00000001810) ENSCVAG00000001812 NXPE3 (ENSCVAG00000001817) CDK16 (ENSCVAG00000001825) abt1 (ENSCVAG00000001828) ENSCVAG00000001832 grm6a (ENSCVAG00000001842) ##22 tsr2 (ENSCVAG00000001845) SRPK3 (ENSCVAG00000001855) PLXNB3 (ENSCVAG00000001870) abcd1 (ENSCVAG00000001887) ENSCVAG00000001895 ENSCVAG00000001900 ENSCVAG00000001909 mecp2 (ENSCVAG00000001916) ENSCVAG00000001919 FGD1 (ENSCVAG00000001930) TFE3 (ENSCVAG00000001957) ENSCVAG00000001963 cxxc1a (ENSCVAG00000002083) ENSCVAG00000002108 ENSCVAG00000002115 Mummichog DUPLICATION Mummichog MODERN SPECIES 451 dag1 (ENSFHEG00000012354) nicn1 (ENSFHEG00000012362) ENSFHEG00000012371 ENSFHEG00000012380 ##22 Mummichog MODERN SPECIES 1439 ENSFHEG00000019465 ##22 ENSFHEG00000019473 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00990000210258 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.m ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b ENSGT01030000234637.b.c.g Zig-zag eel MODERN SPECIES 21 mkrn4 (ENSMAMG00000011051) ppardb (ENSMAMG00000011065) DEF6 (ENSMAMG00000011078) ENSMAMG00000011104 pfkma (ENSMAMG00000011141) ENSMAMG00000011206 asb8 (ENSMAMG00000027831) atf7a (ENSMAMG00000011234) dip2ba (ENSMAMG00000011261) ENSMAMG00000011315 ENSMAMG00000011361 ENSMAMG00000025721 ENSMAMG00000011416 ENSMAMG00000011460 ENSMAMG00000011498 grm6a (ENSMAMG00000011504) ##22 tsr2 (ENSMAMG00000011540) SRPK3 (ENSMAMG00000011547) ENSMAMG00000011573 abcd1 (ENSMAMG00000011668) ENSMAMG00000011700 ENSMAMG00000011723 ENSMAMG00000011744 ENSMAMG00000011796 ENSMAMG00000011807 ENSMAMG00000011823 ENSMAMG00000011838 ENSMAMG00000011870 cxxc1a (ENSMAMG00000011895) ENSMAMG00000011914 ENSMAMG00000011945 Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000159855 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000175919 ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00390000002062 ENSGT00940000156963.a.b Climbing perch MODERN SPECIES 20 cxxc1a (ENSATEG00000019631) ENSATEG00000019604 ENSATEG00000019578 ENSATEG00000019560 ENSATEG00000019532 ENSATEG00000019515 ENSATEG00000028169 ENSATEG00000026321 ENSATEG00000019432 ENSATEG00000019386 abcd1 (ENSATEG00000019330) ENSATEG00000019296 ENSATEG00000019117 SRPK3 (ENSATEG00000019084) ENSATEG00000019071 ENSATEG00000019019 ##22 tsr2 (ENSATEG00000019009) ENSATEG00000018998 ENSATEG00000018948 Carangaria ANCESTRAL SPECIES 2 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.m ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Pleuronectoidei ANCESTRAL SPECIES 24 ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Turbot MODERN SPECIES 2 ENSSMAG00000031042 ENSSMAG00000013423 FGD3 (ENSSMAG00000013383) ENSSMAG00000013331 ENSSMAG00000013261 zgc:171857 (ENSSMAG00000013246) WNT7A (ENSSMAG00000013237) FBLN2 (ENSSMAG00000013213) NUP210 (ENSSMAG00000013104) IQSEC1 (ENSSMAG00000013037) ENSSMAG00000013028 ENSSMAG00000013004 cnbpa (ENSSMAG00000029786) ENSSMAG00000032588 ENSSMAG00000012972 ENSSMAG00000012928 ##22 tsr2 (ENSSMAG00000012882) SRPK3 (ENSSMAG00000012744) ENSSMAG00000012623 abcd1 (ENSSMAG00000012522) ENSSMAG00000012502 ENSSMAG00000012466 ENSSMAG00000012458 ENSSMAG00000012446 ENSSMAG00000012438 ENSSMAG00000012385 IFT122 (ENSSMAG00000012276) exorh (ENSSMAG00000012265) PLXND1 (ENSSMAG00000012111) TMCC1 (ENSSMAG00000012052) trh (ENSSMAG00000012040) Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.m ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Seriola ANCESTRAL SPECIES 75 ENSGT00940000156963.a.b ENSGT00940000155317.a.a.m ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000175919 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Greater amberjack MODERN SPECIES 150 CDK16 (ENSSDUG00000019268) COMT (ENSSDUG00000019301) abt1 (ENSSDUG00000019357) rad51c (ENSSDUG00000019366) GRM6 (ENSSDUG00000019376) ##22 tsr2 (ENSSDUG00000019445) SRPK3 (ENSSDUG00000019453) ENSSDUG00000019492 PLXNB3 (ENSSDUG00000019515) abcd1 (ENSSDUG00000019696) ENSSDUG00000019722 ENSSDUG00000019763 ENSSDUG00000019781 mecp2 (ENSSDUG00000019809) ENSSDUG00000019824 FGD1 (ENSSDUG00000019849) TFE3 (ENSSDUG00000019935) ENSSDUG00000019955 cxxc1a (ENSSDUG00000019959) ENSSDUG00000019982 Yellowtail amberjack MODERN SPECIES 2724 CDK16 (ENSSLDG00000005240) COMT (ENSSLDG00000005333) abt1 (ENSSLDG00000005513) rad51c (ENSSLDG00000005524) GRM6 (ENSSLDG00000005543) ##22 tsr2 (ENSSLDG00000005598) SRPK3 (ENSSLDG00000005703) PLXNB3 (ENSSLDG00000005974) abcd1 (ENSSLDG00000006205) ENSSLDG00000006250 ENSSLDG00000006262 ENSSLDG00000006286 mecp2 (ENSSLDG00000006333) ENSSLDG00000006346 ENSSLDG00000006375 ENSSLDG00000006396 TFE3 (ENSSLDG00000006428) ENSSLDG00000006443 CXXC1 (ENSSLDG00000006497) ENSSLDG00000006702 Barramundi perch MODERN SPECIES 443 ENSLCAG00010017702 cxxc1a (ENSLCAG00010017703) HDAC6 (ENSLCAG00010017708) ENSLCAG00010017720 ENSLCAG00010017725 sypa (ENSLCAG00010017728) ENSLCAG00010017736 mecp2 (ENSLCAG00010017746) ENSLCAG00010017753 abcd1 (ENSLCAG00010017910) PLXNB3 (ENSLCAG00010017937) SRPK3 (ENSLCAG00010017967) ENSLCAG00010017968 abt1 (ENSLCAG00010017969) rad51c (ENSLCAG00010017971) GRM6 (ENSLCAG00010018045) ##22 ENSLCAG00010018354 CDK16 (ENSLCAG00010018396) Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00990000210258 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00990000210258 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 Ballan wrasse MODERN SPECIES 954 CDK16 (ENSLBEG00000017127) abt1 (ENSLBEG00000017161) rad51c (ENSLBEG00000017178) grm6a (ENSLBEG00000017198) ##22 ENSLBEG00000017259 tsr2 (ENSLBEG00000017316) SRPK3 (ENSLBEG00000017286) ENSLBEG00000017332 PLXNB3 (ENSLBEG00000017384) ENSLBEG00000017564 Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00990000210258 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 Eupecaria_C ANCESTRAL SPECIES 31 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 42 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT00940000156805 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.j ENSGT00940000181187 ENSGT00730000111044 ENSGT00940000159563 ENSGT00990000203541.b European seabass MODERN SPECIES 14 ENSDLAG00005028849 ENSDLAG00005028980 ENSDLAG00005033797 ENSDLAG00005018262 ENSDLAG00005034848 ENSDLAG00005014655 ENSDLAG00005035011 ENSDLAG00005027562 ENSDLAG00005021803 ENSDLAG00005034043 ENSDLAG00005013270 ENSDLAG00005014307 abt1 (ENSDLAG00005014326) ENSDLAG00005027640 ENSDLAG00005014357 ENSDLAG00005014385 ##22 tsr2 (ENSDLAG00005029437) SRPK3 (ENSDLAG00005031799) ENSDLAG00005030649 abcd1 (ENSDLAG00005016340) ENSDLAG00005029985 ENSDLAG00005004085 ENSDLAG00005033657 ENSDLAG00005004067 ENSDLAG00005031463 ENSDLAG00005028443 ENSDLAG00005034191 ENSDLAG00005030977 ENSDLAG00005028920 cxxc1a (ENSDLAG00005031159) ENSDLAG00005031629 Large yellow croaker MODERN SPECIES 29 CDK16 (ENSLCRG00005019813) abt1 (ENSLCRG00005019922) rad51c (ENSLCRG00005019923) grm6a (ENSLCRG00005019925) ##22 ENSLCRG00005019997 SRPK3 (ENSLCRG00005019999) PLXNB3 (ENSLCRG00005020040) abcd1 (ENSLCRG00005020298) ENSLCRG00005020882 ENSLCRG00005020884 ENSLCRG00005020885 mecp2 (ENSLCRG00005020893) ENSLCRG00005020895 FGD1 (ENSLCRG00005020901) TFE3 (ENSLCRG00005021053) ENSLCRG00005021054 CXXC1 (ENSLCRG00005021056) ENSLCRG00005021098 cacna1fb (ENSLCRG00005021100) Gilthead seabream MODERN SPECIES 21 CDK16 (ENSSAUG00010018454) abt1 (ENSSAUG00010018548) rad51c (ENSSAUG00010018550) grm6a (ENSSAUG00010018563) ##22 tsr2 (ENSSAUG00010019259) SRPK3 (ENSSAUG00010019271) ENSSAUG00010020741 ENSSAUG00010020751 abcd1 (ENSSAUG00010020753) ENSSAUG00010020809 ENSSAUG00010020828 ENSSAUG00010020871 ENSSAUG00010020873 ENSSAUG00010020874 ENSSAUG00010020876 ENSSAUG00010020928 ENSSAUG00010020930 cacna1fb (ENSSAUG00010020946) ENSSAUG00010022054 Perciformes ANCESTRAL SPECIES 37 ENSGT00940000156963.a.b ENSGT00940000156805 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00530000063687.b.b.b ENSGT00940000159855 ENSGT00940000164755.A ENSGT00940000156315.f Cottioidei ANCESTRAL SPECIES 47 ENSGT00940000156963.a.b ENSGT00940000156805 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000160502 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00390000003348 ENSGT00530000063687.b.b.b ENSGT00940000159855 Lumpfish MODERN SPECIES 22 aar2 (ENSCLMG00005010140) EMILIN3 (ENSCLMG00005010141) b4galt5 (ENSCLMG00005010144) zhx3b (ENSCLMG00005010553) plcg1 (ENSCLMG00005010570) TOP1 (ENSCLMG00005011678) ENSCLMG00005011680 GGT7 (ENSCLMG00005011681) TP53INP2 (ENSCLMG00005011732) snai1b (ENSCLMG00005011734) samhd1 (ENSCLMG00005011739) ENSCLMG00005012971 CDK16 (ENSCLMG00005012987) rad51c (ENSCLMG00005013172) abt1 (ENSCLMG00005013173) GRM6 (ENSCLMG00005013175) ##22 ENSCLMG00005013176 tsr2 (ENSCLMG00005013178) SRPK3 (ENSCLMG00005013236) PLXNB3 (ENSCLMG00005016945) abcd1 (ENSCLMG00005017334) ENSCLMG00005017745 ENSCLMG00005017746 ENSCLMG00005017751 ENSCLMG00005000075 ENSCLMG00005000096 ENSCLMG00005000110 sypa (ENSCLMG00005000117) ENSCLMG00005000133 ENSCLMG00005000208 cxxc1a (ENSCLMG00005000489) Stickleback MODERN SPECIES 67 itpr3 (ENSGACG00000000253) gripap1 (ENSGACG00000000262) st14b (ENSGACG00000000267) ENSGACG00000000270 arl8a (ENSGACG00000000273) GPR37L1 (ENSGACG00000000278) ##26 plxna3 (ENSGACG00000000280) bcap31 (ENSGACG00000000281) ENSGACG00000000285 slc35a2 (ENSGACG00000000286) ENSGACG00000000288 CDK16 (ENSGACG00000000290) rad51c (ENSGACG00000000293) abt1 (ENSGACG00000000295) ENSGACG00000000296 GRM6 (ENSGACG00000000297) ##22 Perciformes_a ANCESTRAL SPECIES 5 ENSGT00940000156805 ENSGT00940000156963.a.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000157877.b.g ENSGT01020000230394.e.a.a.b.a.b ENSGT00950000182955.a.b.a ENSGT00940000154102.b.a.b ENSGT00940000167532 ENSGT00940000160502 ENSGT01030000234637.b.c.g ENSGT00990000203541.b ENSGT00940000159563 ENSGT00730000111044 ENSGT00940000157503.i.b ENSGT00940000155877 ENSGT01030000234549.a.a.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a Pike perch MODERN SPECIES 96 sult1st6 (ENSSLUG00000006894) ENSSLUG00000006885 ENSSLUG00000006879 ENSSLUG00000006872 rad51c (ENSSLUG00000006868) CDK16 (ENSSLUG00000006596) abt1 (ENSSLUG00000006557) GRM6 (ENSSLUG00000006540) ##22 tsr2 (ENSSLUG00000006530) SRPK3 (ENSSLUG00000005919) ENSSLUG00000004185 abcd1 (ENSSLUG00000002614) ENSSLUG00000002492 ENSSLUG00000002355 ENSSLUG00000002337 ENSSLUG00000002325 ENSSLUG00000002315 sypa (ENSSLUG00000002310) ENSSLUG00000002307 ENSSLUG00000001926 cxxc1a (ENSSLUG00000001738) ENSSLUG00000001700 ENSSLUG00000001694 Tetraodontidae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.a ##22 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 amd1 (ENSTNIG00000002750) CDK19 (ENSTNIG00000002752) ENSTNIG00000002760 NTSR1 (ENSTNIG00000002761) ##26 nsfl1c (ENSTNIG00000002762) gata5 (ENSTNIG00000002769) ENSTNIG00000002774 ENSTNIG00000002775 ENSTNIG00000002777 ENSTNIG00000002785 ENSTNIG00000002830 gpx7 (ENSTNIG00000002786) ENSTNIG00000002787 pomgnt1 (ENSTNIG00000002788) TSPAN1 (ENSTNIG00000000821) GRM6 (ENSTNIG00000002806) ##22 SRPK3 (ENSTNIG00000002807) UBL3 (ENSTNIG00000009908) ENSTNIG00000002831 uqcc1 (ENSTNIG00000002832) fam83c (ENSTNIG00000002833) MMP24 (ENSTNIG00000002834) ENSTNIG00000002835 eif6 (ENSTNIG00000002836) map1lc3a (ENSTNIG00000002837) dynlrb1 (ENSTNIG00000002838) ENSTNIG00000002839 ENSTNIG00000002840 ENSTNIG00000002841 ENSTNIG00000002842 ENSTNIG00000002843 Tetraodon MODERN SPECIES 26 PFKFB1 (ENSTNIG00000006832) ENSTNIG00000003492 PDZD4 (ENSTNIG00000003491) IQSEC2 (ENSTNIG00000014953) zgc:86609 (ENSTNIG00000014954) USP11 (ENSTNIG00000014955) rfc2 (ENSTNIG00000014956) ENSTNIG00000014957 ENSTNIG00000014958 ENSTNIG00000014959 ENSTNIG00000014960 abt1 (ENSTNIG00000014961) CDK16 (ENSTNIG00000014962) ENSTNIG00000014963 rad51c (ENSTNIG00000014964) ENSTNIG00000014965 ##22 ENSTNIG00000002273 XPO1 (ENSTNIG00000003360) cct4 (ENSTNIG00000003361) pus10 (ENSTNIG00000003362) ENSTNIG00000005303 ENSTNIG00000000317 ENSTNIG00000005304 ENSTNIG00000005305 ENSTNIG00000003614 abcd1 (ENSTNIG00000006189) gnl2 (ENSTNIG00000003733) dnali1 (ENSTNIG00000003732) ENSTNIG00000012195 THRAP3 (ENSTNIG00000012194) sh3d21 (ENSTNIG00000012193) Tiger tail seahorse MODERN SPECIES 514 XDH (ENSHCOG00000002935) dnajc27 (ENSHCOG00000002948) ENSHCOG00000002955 creg1 (ENSHCOG00000002961) otud5a (ENSHCOG00000002974) slc35a2 (ENSHCOG00000002991) slc6a8 (ENSHCOG00000003009) bcap31 (ENSHCOG00000003029) plxna3 (ENSHCOG00000003075) gripap1 (ENSHCOG00000003180) kcnd1 (ENSHCOG00000003209) rad51c (ENSHCOG00000003223) ENSHCOG00000003571 abt1 (ENSHCOG00000003610) CDK16 (ENSHCOG00000003661) GRM6 (ENSHCOG00000003691) ##22 AMIGO1 (ENSHCOG00000003703) ENSHCOG00000003711 sort1b (ENSHCOG00000003722) ngrn (ENSHCOG00000003730) nfyal (ENSHCOG00000003767) ahcyl1 (ENSHCOG00000003816) pgm2l1 (ENSHCOG00000003850) ENSHCOG00000003912 ZNF335 (ENSHCOG00000003939) prok1 (ENSHCOG00000003950) lamtor5 (ENSHCOG00000004009) slc16a4 (ENSHCOG00000004036) RBM15 (ENSHCOG00000004048) ENSHCOG00000004058 ENSHCOG00000004070 Osteoglossiformes ANCESTRAL SPECIES 147 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00940000158685 ENSGT00940000155480.d.m ENSGT00730000111044 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 ENSGT01050000244850.A.a.o.a ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00720000108868 P. kingsleyae MODERN SPECIES 301 mecp2 (ENSPKIG00000023979) ENSPKIG00000023954 FGD1 (ENSPKIG00000023905) tfe3a (ENSPKIG00000023885) ENSPKIG00000023877 cxxc1a (ENSPKIG00000023833) ENSPKIG00000023805 ENSPKIG00000023796 abcd1 (ENSPKIG00000023779) PLXNB3 (ENSPKIG00000023729) SRPK3 (ENSPKIG00000023691) tsr2 (ENSPKIG00000023676) CDK16 (ENSPKIG00000023637) comta (ENSPKIG00000023566) abt1 (ENSPKIG00000023588) grm6a (ENSPKIG00000023528) ##22 USP11 (ENSPKIG00000023476) zgc:86609 (ENSPKIG00000023431) uxt (ENSPKIG00000023407) ENSPKIG00000023382 Asian bonytongue MODERN SPECIES ENSSFOG00015001848 FGD1 (ENSSFOG00015001880) tfe3a (ENSSFOG00015001934) zgc:113363 (ENSSFOG00015032088) cxxc1a (ENSSFOG00015001940) ENSSFOG00015001950 ENSSFOG00015026264 ENSSFOG00015030516 abcd1 (ENSSFOG00015001977) PLXNB3 (ENSSFOG00015002059) SRPK3 (ENSSFOG00015002090) tsr2 (ENSSFOG00015002207) CDK16 (ENSSFOG00015002239) abt1 (ENSSFOG00015031363) comta (ENSSFOG00015032003) grm6a (ENSSFOG00015002324) ##22 USP11 (ENSSFOG00015002379) zgc:86609 (ENSSFOG00015002467) uxt (ENSSFOG00015002509) ENSSFOG00015002614 ENSSFOG00015002627 otud5a (ENSSFOG00015030449) pim2 (ENSSFOG00015002649) pim2 (ENSSFOG00015002666) slc35a2 (ENSSFOG00015002690) bcap31 (ENSSFOG00015002726) slc6a8 (ENSSFOG00015033035) slc6a8 (ENSSFOG00015002806) PNCK (ENSSFOG00015002842) plxna3 (ENSSFOG00015002896) ptpn18 (ENSSFOG00015003042) Reedfish MODERN SPECIES 2 gnl3l (ENSECRG00000007644) mecp2 (ENSECRG00000007685) IRAK1 (ENSECRG00000007760) ENSECRG00000007782 TMEM187 (ENSECRG00000007796) HCFC1 (ENSECRG00000007822) si:dkey-13a21.4 (ENSECRG00000007855) cdk20 (ENSECRG00000007865) gata1a (ENSECRG00000007886) ENSECRG00000007908 ENSECRG00000007966 tsr2 (ENSECRG00000008057) CDK16 (ENSECRG00000008102) comtb (ENSECRG00000008178) abt1 (ENSECRG00000008206) ENSECRG00000008237 ##22 ENSECRG00000008328 ##22 ENSECRG00000008668 zgc:86609 (ENSECRG00000008697) uxt (ENSECRG00000008724) ENSECRG00000008741 ENSECRG00000008752 otud5a (ENSECRG00000008757) pim2 (ENSECRG00000008775) pim2 (ENSECRG00000008783) slc35a2 (ENSECRG00000008796) bcap31 (ENSECRG00000008809) slc6a8 (ENSECRG00000008845) ENSECRG00000008903 ENSECRG00000008931 ENSECRG00000008948 Actinopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.a.b ##22 Clupeocephala ANCESTRAL SPECIES 149 ENSGT00390000002062 ENSGT00940000161383.d.b ENSGT00940000159128 ENSGT00940000166313.b ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 Otomorpha ANCESTRAL SPECIES 83 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000161689 ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c Clupeiformes ANCESTRAL SPECIES 86 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00940000159809 ENSGT00390000001799 ENSGT00940000155569.a.a ENSGT00530000063255.A ENSGT01000000214440.B ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.b ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00940000154102.a.h ENSGT01050000244888.a.b ENSGT00940000160300.b.b ENSGT00940000158083.b ENSGT00940000157665.b ENSGT00510000046843.a.b.l ENSGT00390000001509.a ENSGT00950000182903.b.a.z ENSGT00940000166327 ENSGT00500000044947 ENSGT00950000182834.C ENSGT00390000009278.a ENSGT00940000166894 ENSGT00940000158374.d Atlantic herring MODERN SPECIES 21 camkvb (ENSCHAG00000008371) ENSCHAG00000008556 ENSCHAG00000008627 mon1a (ENSCHAG00000008722) ENSCHAG00000008726 ENSCHAG00000008741 nelfcd (ENSCHAG00000008753) ctsz (ENSCHAG00000009119) ENSCHAG00000009200 npepl1 (ENSCHAG00000009212) STX16 (ENSCHAG00000009836) mbd1b (ENSCHAG00000009904) ccdc120b (ENSCHAG00000009963) ENSCHAG00000010017 ENSCHAG00000011442 grm6b (ENSCHAG00000011535) ##22 otud5b (ENSCHAG00000011755) inavab (ENSCHAG00000011825) ENSCHAG00000011837 GPR25 (ENSCHAG00000011855) ENSCHAG00000011879 olfml3b (ENSCHAG00000011888) ENSCHAG00000011906 ENSCHAG00000011913 ENSCHAG00000011957 mxra8a (ENSCHAG00000012742) ENSCHAG00000012766 ENSCHAG00000012774 utp3 (ENSCHAG00000012804) ppcs (ENSCHAG00000012821) foxj3 (ENSCHAG00000012858) Denticle herring MODERN SPECIES 3 ENSDCDG00000015348 SEMA3F (ENSDCDG00000021551) camkvb (ENSDCDG00000021439) ENSDCDG00000021427 mon1a (ENSDCDG00000021422) ENSDCDG00000021417 ENSDCDG00000021412 nelfcd (ENSDCDG00000021242) ctsz (ENSDCDG00000021228) npepl1 (ENSDCDG00000021220) STX16 (ENSDCDG00000021217) mbd1b (ENSDCDG00000021207) ccdc120b (ENSDCDG00000021198) SRPK3 (ENSDCDG00000021100) comtb (ENSDCDG00000021086) grm6b (ENSDCDG00000020548) ##22 otud5b (ENSDCDG00000020507) inavab (ENSDCDG00000020505) GPR25 (ENSDCDG00000020501) ENSDCDG00000020498 olfml3b (ENSDCDG00000020495) SYT6 (ENSDCDG00000020492) PLEKHG5 (ENSDCDG00000020321) mxra8a (ENSDCDG00000020313) dvl1b (ENSDCDG00000020176) utp3 (ENSDCDG00000020147) ppcs (ENSDCDG00000020135) foxj3 (ENSDCDG00000020106) PRDM2 (ENSDCDG00000020063) kaznb (ENSDCDG00000020060) tmem51b (ENSDCDG00000020058) Otophysi ANCESTRAL SPECIES 91 ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000006665.b.g ENSGT00940000155056.b ENSGT00940000163942.a ENSGT00940000158374.d ENSGT00940000166894 ENSGT00390000009278.a ENSGT00940000154570.a.a ENSGT00940000159410 ENSGT00940000165157 ENSGT00950000182834.C ENSGT00500000044947 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 Characiphysae ANCESTRAL SPECIES 30 ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000006665.b.g ENSGT00940000155056.b ENSGT00940000163942.a ENSGT00940000158374.d ENSGT00940000166894 ENSGT00390000009278.a ENSGT00940000154570.a.a ENSGT00940000159410 ENSGT00940000165157 ENSGT00950000182834.C ENSGT00500000044947 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 Characiphysae_b ANCESTRAL SPECIES 134 ENSGT00940000167532 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT00390000003348 ENSGT00940000159438 ENSGT00940000157503.i.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963.b.b ENSGT00940000163427.c ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000156776.c Characoidei ANCESTRAL SPECIES 214 ENSGT00940000158405 ENSGT00940000160486.d.d ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000006665.b.g ENSGT00940000155056.b ENSGT00940000163942.a ENSGT00940000158374.d Mexicana tetra MODERN SPECIES 14 ephb2b (ENSAMXG00000006326) fam83d (ENSAMXG00000036827) adnpa (ENSAMXG00000006355) gata1a (ENSAMXG00000040272) si:dkey-13a21.4 (ENSAMXG00000032663) opn1sw2 (ENSAMXG00000037260) opn1lw1 (ENSAMXG00000006368) gnl3l (ENSAMXG00000006376) tfe3b (ENSAMXG00000020781) cxxc1b (ENSAMXG00000006383) ccdc120b (ENSAMXG00000042805) grm6b (ENSAMXG00000006398) ##22 MON1B (ENSAMXG00000006415) BRPF3 (ENSAMXG00000041882) ENSAMXG00000031120 PLCH2 (ENSAMXG00000006425) ENSAMXG00000024789 LACTBL1 (ENSAMXG00000004600) ENSAMXG00000043590 ENSAMXG00000029622 smarcd1 (ENSAMXG00000004577) gpd1b (ENSAMXG00000029979) cers5 (ENSAMXG00000004553) ENSAMXG00000025806 BCDIN3D (ENSAMXG00000004546) ENSAMXG00000038993 dnase1l4.2 (ENSAMXG00000036786) Red-bellied piranha MODERN SPECIES 622 mbd1b (ENSPNAG00000018075) ccdc120b (ENSPNAG00000018137) comtb (ENSPNAG00000018256) grm6b (ENSPNAG00000018295) ##22 otud5b (ENSPNAG00000018357) MON1B (ENSPNAG00000018371) BRPF3 (ENSPNAG00000018439) ENSPNAG00000018493 PLCH2 (ENSPNAG00000018519) Electric eel MODERN SPECIES 66 comtb (ENSEEEG00000000388) grm6b (ENSEEEG00000000371) ##22 otud5b (ENSEEEG00000000337) MON1B (ENSEEEG00000000316) BRPF3 (ENSEEEG00000000228) ENSEEEG00000000128 skib (ENSEEEG00000024169) ENSEEEG00000024165 kaznb (ENSEEEG00000024163) PRDM2 (ENSEEEG00000024162) foxj3 (ENSEEEG00000024161) lix1 (ENSEEEG00000024160) olfm1a (ENSEEEG00000024159) ENSEEEG00000024158 rxrab (ENSEEEG00000024157) ENSEEEG00000024152 brd3b (ENSEEEG00000024147) Cyprinoidei ANCESTRAL SPECIES 23 ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT01060000253577 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00730000111044 ENSGT00940000169444 ENSGT00940000154102.b.a.b ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b.g ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00940000158963.b.a ENSGT00390000006665.b.g ENSGT00940000155056.b ENSGT00940000163942.a ENSGT00940000158374.d ENSGT00940000166894 ENSGT00390000009278.a ENSGT00940000154570.a.a ENSGT00940000159410 ENSGT00940000165157 ENSGT00950000182834.C ENSGT00500000044947 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 17 ENSGT00940000158405.f ENSGT00940000161531.b.b ENSGT00940000164411.a ENSGT00530000063631.b.n.a.b ENSGT00940000166313.a.b ENSGT00940000166196.e ENSGT00940000164702.b.a ENSGT01030000234549.a.a.a.a.a.a.b ENSGT01030000234549.a.a.a.b.fb ENSGT00940000155877.a ENSGT00940000157503.i.b.a ENSGT00940000166392.b ENSGT00950000183005.a.a.e ENSGT00940000154102.b.a.a.a ENSGT00940000155317.a.a.j.b ENSGT01030000234648.a.b.a.b.a.b.a ##22 ENSGT00940000158963.b.a.b ENSGT00390000006665.b.g.a ENSGT00940000155056.b.b ENSGT00940000163942.a.a ENSGT00940000158374.d.b ENSGT00940000166894.b ENSGT00390000009278.a.a ENSGT00940000154570.a.a.d ENSGT00940000159410.p ENSGT00940000165157.cb ENSGT00950000182834.C.b ENSGT00500000044947 ENSGT00940000160611.m ENSGT00940000162210.b ENSGT00940000160586.i Cyprininae_a ANCESTRAL SPECIES 9 ENSGT00940000158405.f ENSGT00940000161531.b.b ENSGT00940000164411.a ENSGT00530000063631.b.n.a.b ENSGT00940000166313.a.b ENSGT00940000166196.e ENSGT00940000164702.b.a ENSGT01030000234549.a.a.a.a.a.a.b ENSGT01030000234549.a.a.a.b.fb ENSGT00940000155877.a ENSGT00940000157503.i.b.a ENSGT00940000166392.b ENSGT00950000183005.a.a.e ENSGT00940000154102.b.a.a.a ENSGT00940000155317.a.a.j.b ENSGT01030000234648.a.b.a.b.a.b.a ##22 ENSGT00940000158963.b.a.b ENSGT00390000006665.b.g.a ENSGT00940000155056.b.b ENSGT00940000163942.a.a ENSGT00940000158374.d.b ENSGT00940000166894.b ENSGT00390000009278.a.a ENSGT00940000154570.a.a.d ENSGT00940000159410.p ENSGT00940000165157.cb ENSGT00950000182834.C.b ENSGT00500000044947 ENSGT00940000160611.m ENSGT00940000162210.b ENSGT00940000160586.i Golden-line barbel MODERN SPECIES 2 ENSSGRG00000052703 top1a (ENSSGRG00000052705) ENSSGRG00000052959 fam83d (ENSSGRG00000052960) ENSSGRG00000052961 adnpa (ENSSGRG00000052962) gata1a (ENSSGRG00000052963) si:dkey-13a21.4 (ENSSGRG00000052964) hcfc1a (ENSSGRG00000052971) opn1sw2 (ENSSGRG00000053033) ENSSGRG00000053037 gnl3l (ENSSGRG00000053063) cxxc1b (ENSSGRG00000053088) mbd1b (ENSSGRG00000053211) ccdc120b (ENSSGRG00000053213) grm6b (ENSSGRG00000053215) ##22 otud5b (ENSSGRG00000053241) MON1B (ENSSGRG00000053261) BRPF3 (ENSSGRG00000053264) ENSSGRG00000053265 PLCH2 (ENSSGRG00000053266) skib (ENSSGRG00000053270) tmem51b (ENSSGRG00000053271) ENSSGRG00000053273 kaznb (ENSSGRG00000053276) PRDM2 (ENSSGRG00000053278) foxj3 (ENSSGRG00000053279) ppcs (ENSSGRG00000053280) rbm12 (ENSSGRG00000053282) cpne1 (ENSSGRG00000053287) ENSSGRG00000053441 Common carp reference MODERN SPECIES 13 ENSCCRG00000043267 fam83d (ENSCCRG00000043259) mafbb (ENSCCRG00000071188) ENSCCRG00000062076 adnpa (ENSCCRG00000067055) gata1a (ENSCCRG00000005129) si:dkey-13a21.4 (ENSCCRG00000005132) hcfc1a (ENSCCRG00000018417) ENSCCRG00000034762 gnl3l (ENSCCRG00000034764) tfe3b (ENSCCRG00000042182) cxxc1b (ENSCCRG00000040395) mbd1b (ENSCCRG00000040434) ccdc120b (ENSCCRG00000041901) comtb (ENSCCRG00000058467) grm6b (ENSCCRG00000039534) ##22 otud5b (ENSCCRG00000055331) ENSCCRG00000040483 ENSCCRG00000056706 ENSCCRG00000082610 ENSCCRG00000039484 skib (ENSCCRG00000039528) tmem51b (ENSCCRG00000066188) kaznb (ENSCCRG00000041361) PRDM2 (ENSCCRG00000066868) foxj3 (ENSCCRG00000041882) ENSCCRG00000075282 ppcs (ENSCCRG00000018688) utp3 (ENSCCRG00000018699) rbm12 (ENSCCRG00000056406) cpne1 (ENSCCRG00000018715) Goldfish MODERN SPECIES 2 fam83d (ENSCARG00000011289) mafbb (ENSCARG00000011282) ENSCARG00000011231 adnpa (ENSCARG00000011224) gata1a (ENSCARG00000011209) si:dkey-13a21.4 (ENSCARG00000011198) hcfc1a (ENSCARG00000010684) opn1sw2 (ENSCARG00000010620) ENSCARG00000010595 gnl3l (ENSCARG00000010084) tfe3b (ENSCARG00000010567) cxxc1b (ENSCARG00000009899) mbd1b (ENSCARG00000009878) ccdc120b (ENSCARG00000009875) comtb (ENSCARG00000009856) grm6b (ENSCARG00000009850) ##22 otud5b (ENSCARG00000009489) MON1B (ENSCARG00000009463) BRPF3 (ENSCARG00000009425) ENSCARG00000009384 skib (ENSCARG00000009364) tmem51b (ENSCARG00000009358) kaznb (ENSCARG00000009343) PRDM2 (ENSCARG00000009321) foxj3 (ENSCARG00000009213) ppcs (ENSCARG00000009197) ENSCARG00000039027 rbm12 (ENSCARG00000039023) cpne1 (ENSCARG00000034515) ENSCARG00000034251 st3gal8 (ENSCARG00000034224) Cyprininae ANCESTRAL SPECIES 212 ENSGT00940000161531.b.a ENSGT00940000164411.b ENSGT00530000063631.b.n.a.a ENSGT00940000166313.a.a ENSGT00940000166196.f ENSGT00940000164702.b.b ENSGT01030000234549.a.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.gb ENSGT00940000155877.b ENSGT00940000157503.i.b.b ENSGT01060000253577 ENSGT00940000166392.a ENSGT00950000183005.a.a.f ENSGT00940000154102.b.a.a.b ENSGT00940000155317.a.a.j.a ENSGT01030000234648.a.b.a.b.a.b.b ##22 ENSGT00940000158963.b.a.a ENSGT00390000006665.b.g.b ENSGT00940000155056.b.a ENSGT00940000163942.a.b ENSGT00940000158374.d.a ENSGT00940000166894.a ENSGT00390000009278.a.b ENSGT00940000154570.a.a.c ENSGT00940000159410.o ENSGT00940000165157.db ENSGT00950000182834.C.a ENSGT00940000160611.n ENSGT00940000162210.a ENSGT00940000160586.j ENSGT00940000165482.c Cyprininae_a ANCESTRAL SPECIES 3 ENSGT00940000161531.b.a ENSGT00940000164411.b ENSGT00530000063631.b.n.a.a ENSGT00940000166313.a.a ENSGT00940000166196.f ENSGT00940000164702.b.b ENSGT01030000234549.a.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.gb ENSGT00940000155877.b ENSGT00940000157503.i.b.b ENSGT01060000253577 ENSGT00940000166392.a ENSGT00950000183005.a.a.f ENSGT00940000154102.b.a.a.b ENSGT00940000155317.a.a.j.a ENSGT01030000234648.a.b.a.b.a.b.b ##22 ENSGT00940000158963.b.a.a ENSGT00390000006665.b.g.b ENSGT00940000155056.b.a ENSGT00940000163942.a.b ENSGT00940000158374.d.a ENSGT00940000166894.a ENSGT00390000009278.a.b ENSGT00940000154570.a.a.c ENSGT00940000159410.o ENSGT00940000165157.db ENSGT00950000182834.C.a ENSGT00940000160611.n ENSGT00940000162210.a ENSGT00940000160586.j ENSGT00940000165482.c Golden-line barbel MODERN SPECIES 1 top1a (ENSSGRG00000029390) fam83d (ENSSGRG00000029370) mafbb (ENSSGRG00000029369) ENSSGRG00000029368 ENSSGRG00000029367 si:dkey-13a21.4 (ENSSGRG00000029365) hcfc1a (ENSSGRG00000028465) opn1sw2 (ENSSGRG00000028454) LWS1 (ENSSGRG00000028050) gnl3l (ENSSGRG00000028038) tfe3b (ENSSGRG00000028032) cxxc1b (ENSSGRG00000027621) mbd1b (ENSSGRG00000027615) ccdc120b (ENSSGRG00000027614) comtb (ENSSGRG00000027613) grm6b (ENSSGRG00000027612) ##22 otud5b (ENSSGRG00000027407) ENSSGRG00000027405 BRPF3 (ENSSGRG00000027403) ENSSGRG00000027402 ENSSGRG00000027280 skib (ENSSGRG00000027272) tmem51b (ENSSGRG00000027271) ENSSGRG00000027270 kaznb (ENSSGRG00000027269) Common carp reference MODERN SPECIES 42 ENSCCRG00000063625 ENSCCRG00000043578 top1a (ENSCCRG00000076066) fam83d (ENSCCRG00000043564) ENSCCRG00000043364 adnpa (ENSCCRG00000043343) hcfc1a (ENSCCRG00000058227) opn1sw2 (ENSCCRG00000034760) ENSCCRG00000042194 tfe3b (ENSCCRG00000076795) ENSCCRG00000082624 cxxc1b (ENSCCRG00000041918) mbd1b (ENSCCRG00000079505) ccdc120b (ENSCCRG00000040452) comtb (ENSCCRG00000055844) grm6b (ENSCCRG00000040460) ##22 otud5b (ENSCCRG00000039550) ENSCCRG00000039580 ENSCCRG00000039624 ENSCCRG00000066958 ENSCCRG00000040353 skib (ENSCCRG00000055470) kaznb (ENSCCRG00000048175) ENSCCRG00000002530 foxj3 (ENSCCRG00000002519) ppcs (ENSCCRG00000007743) rbm12 (ENSCCRG00000052976) cpne1 (ENSCCRG00000029688) ENSCCRG00000029635 ENSCCRG00000081943 st3gal8 (ENSCCRG00000020068) Goldfish MODERN SPECIES 142 ENSCARG00000035337 top1a (ENSCARG00000035362) ENSCARG00000036550 fam83d (ENSCARG00000036570) mafbb (ENSCARG00000036595) adnpa (ENSCARG00000036603) gata1a (ENSCARG00000036620) hcfc1a (ENSCARG00000036717) opn1sw2 (ENSCARG00000037260) ENSCARG00000037307 tfe3b (ENSCARG00000037442) cxxc1b (ENSCARG00000040392) mbd1b (ENSCARG00000040889) ccdc120b (ENSCARG00000040903) comtb (ENSCARG00000040935) grm6b (ENSCARG00000040997) ##22 otud5b (ENSCARG00000042249) MON1B (ENSCARG00000042471) BRPF3 (ENSCARG00000042547) ENSCARG00000042717 PLCH2 (ENSCARG00000042766) skib (ENSCARG00000043193) tmem51b (ENSCARG00000043270) kaznb (ENSCARG00000043310) PRDM2 (ENSCARG00000043363) foxj3 (ENSCARG00000043419) ppcs (ENSCARG00000043618) rbm12 (ENSCARG00000043629) cpne1 (ENSCARG00000043687) ENSCARG00000045070 ENSCARG00000045246 Zebrafish MODERN SPECIES 2 ENSDARG00000070541 adnpa (ENSDARG00000062002) gata1a (ENSDARG00000013477) si:dkey-13a21.4 (ENSDARG00000026098) hcfc1a (ENSDARG00000015990) opn1sw2 (ENSDARG00000017274) opn1lw1 (ENSDARG00000044862) opn1lw2 (ENSDARG00000044861) gnl3l (ENSDARG00000020595) tfe3b (ENSDARG00000019457) si:dkey-245f22.3 (ENSDARG00000097510) cxxc1b (ENSDARG00000025718) mbd1b (ENSDARG00000025699) ccdc120b (ENSDARG00000032856) comtb (ENSDARG00000025679) grm6b (ENSDARG00000025671) ##22 otud5b (ENSDARG00000056840) MON1B (ENSDARG00000077434) BRPF3 (ENSDARG00000070513) ENSDARG00000070511 PLCH2 (ENSDARG00000056805) skib (ENSDARG00000008034) tmem51b (ENSDARG00000061916) kaznb (ENSDARG00000006601) PRDM2 (ENSDARG00000076451) foxj3 (ENSDARG00000075774) ppcs (ENSDARG00000061889) utp3 (ENSDARG00000056720) cpne1 (ENSDARG00000075536) rbm12 (ENSDARG00000100636) ENSDARG00000076952 Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Acanthomorphata ANCESTRAL SPECIES 42 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Pinecone sodierfish MODERN SPECIES 19 adnpa (ENSMMDG00005007898) BCL2L1 (ENSMMDG00005007904) gata1a (ENSMMDG00005007905) si:dkey-13a21.4 (ENSMMDG00005007907) hcfc1a (ENSMMDG00005007918) opn1sw2 (ENSMMDG00005007982) opn1sw2 (ENSMMDG00005008017) opn1lw1 (ENSMMDG00005008024) gnl3l (ENSMMDG00005008026) tfe3b (ENSMMDG00005008031) cxxc1b (ENSMMDG00005008061) mbd1b (ENSMMDG00005008899) ccdc120b (ENSMMDG00005008902) SRPK3 (ENSMMDG00005008906) comtb (ENSMMDG00005008931) grm6b (ENSMMDG00005008936) ##22 traip (ENSMMDG00005008941) mon1a (ENSMMDG00005008952) ENSMMDG00005008960 camkvb (ENSMMDG00005008983) SEMA3F (ENSMMDG00005008991) arl8bb (ENSMMDG00005008996) NAAA (ENSMMDG00005009008) bhlhe40 (ENSMMDG00005009011) ITPR1 (ENSMMDG00005009020) ENSMMDG00005009072 setmar (ENSMMDG00005009073) lrrn1 (ENSMMDG00005009074) ENSMMDG00005009079 trnt1 (ENSMMDG00005009082) arl6ip5a (ENSMMDG00005009086) Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Tiger tail seahorse MODERN SPECIES 280 ENSHCOG00000003780 gata1a (ENSHCOG00000003808) HCFC1 (ENSHCOG00000003837) opn1sw2 (ENSHCOG00000005841) opn1sw2 (ENSHCOG00000006937) opn1sw2 (ENSHCOG00000007007) ENSHCOG00000008361 ENSHCOG00000009761 gnl3l (ENSHCOG00000009877) tfe3b (ENSHCOG00000009907) cxxc1b (ENSHCOG00000009945) mbd1b (ENSHCOG00000009952) ccdc120b (ENSHCOG00000000314) SRPK3 (ENSHCOG00000009982) comtb (ENSHCOG00000010157) grm6b (ENSHCOG00000010199) ##22 traip (ENSHCOG00000010255) mon1a (ENSHCOG00000010263) ENSHCOG00000010321 camkvb (ENSHCOG00000010400) SEMA3F (ENSHCOG00000010442) arl8bb (ENSHCOG00000010468) ENSHCOG00000010474 bhlhe40 (ENSHCOG00000010486) ENSHCOG00000000326 ITPR1 (ENSHCOG00000010574) ENSHCOG00000010596 setmar (ENSHCOG00000010603) lrrn1 (ENSHCOG00000010606) trnt1 (ENSHCOG00000010618) arl6ip5a (ENSHCOG00000010626) Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 Pomacentridae ANCESTRAL SPECIES 33 ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h.c ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h.c ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Amphiprion ANCESTRAL SPECIES 38 ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h.c ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000163250.B.b.a.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 Clown anemonefish MODERN SPECIES 1386 adnpa (ENSAOCG00000020540) BCL2L1 (ENSAOCG00000020533) gata1a (ENSAOCG00000020528) si:dkey-13a21.4 (ENSAOCG00000020491) hcfc1a (ENSAOCG00000020454) opn1sw2 (ENSAOCG00000020417) opn1lw1 (ENSAOCG00000020394) gnl3l (ENSAOCG00000020369) tfe3b (ENSAOCG00000020357) cxxc1b (ENSAOCG00000020325) mbd1b (ENSAOCG00000020272) ccdc120b (ENSAOCG00000020252) ENSAOCG00000020237 ENSAOCG00000020213 comtb (ENSAOCG00000020195) grm6b (ENSAOCG00000020181) ##22 traip (ENSAOCG00000020147) mon1a (ENSAOCG00000020133) ENSAOCG00000020104 camkvb (ENSAOCG00000020082) Orange clownfish MODERN SPECIES 20 ENSAPEG00000023397 adnpa (ENSAPEG00000023391) BCL2L1 (ENSAPEG00000023385) gata1a (ENSAPEG00000023372) si:dkey-13a21.4 (ENSAPEG00000023338) ENSAPEG00000023323 opn1sw2 (ENSAPEG00000023305) opn1lw1 (ENSAPEG00000023291) gnl3l (ENSAPEG00000023280) tfe3b (ENSAPEG00000023266) cxxc1b (ENSAPEG00000023253) mbd1b (ENSAPEG00000023230) ccdc120b (ENSAPEG00000023200) SRPK3 (ENSAPEG00000023166) comtb (ENSAPEG00000023151) grm6b (ENSAPEG00000023124) ##22 traip (ENSAPEG00000023069) mon1a (ENSAPEG00000023054) ENSAPEG00000022994 camkvb (ENSAPEG00000022969) SEMA3F (ENSAPEG00000022941) arl8bb (ENSAPEG00000022867) ENSAPEG00000022852 ENSAPEG00000022832 bhlhe40 (ENSAPEG00000022818) ENSAPEG00000022812 ITPR1 (ENSAPEG00000022750) setmar (ENSAPEG00000022737) lrrn1 (ENSAPEG00000022732) ENSAPEG00000022640 trnt1 (ENSAPEG00000022627) Spiny chromis MODERN SPECIES 5 ENSAPOG00000010385 adnpa (ENSAPOG00000010396) BCL2L1 (ENSAPOG00000010408) gata1a (ENSAPOG00000010416) si:dkey-13a21.4 (ENSAPOG00000010446) hcfc1a (ENSAPOG00000010487) opn1sw2 (ENSAPOG00000010519) opn1lw1 (ENSAPOG00000012463) gnl3l (ENSAPOG00000012629) tfe3b (ENSAPOG00000012695) cxxc1b (ENSAPOG00000012779) mbd1b (ENSAPOG00000012810) ccdc120b (ENSAPOG00000012838) SRPK3 (ENSAPOG00000012864) comtb (ENSAPOG00000012877) grm6b (ENSAPOG00000012948) ##22 traip (ENSAPOG00000013037) mon1a (ENSAPOG00000000350) ENSAPOG00000013161 camkvb (ENSAPOG00000013178) SEMA3F (ENSAPOG00000013275) arl8bb (ENSAPOG00000013328) NAAA (ENSAPOG00000013354) bhlhe40 (ENSAPOG00000013386) ITPR1 (ENSAPOG00000013619) setmar (ENSAPOG00000013638) lrrn1 (ENSAPOG00000013646) ENSAPOG00000013653 trnt1 (ENSAPOG00000013687) arl6ip5a (ENSAPOG00000013701) FRMD4B (ENSAPOG00000013741) Bicolor damselfish MODERN SPECIES 1122 ENSSPAG00000021221 adnpa (ENSSPAG00000021247) BCL2L1 (ENSSPAG00000021255) gata1a (ENSSPAG00000021259) si:dkey-13a21.4 (ENSSPAG00000021279) hcfc1a (ENSSPAG00000021303) opn1sw2 (ENSSPAG00000021344) opn1lw1 (ENSSPAG00000021356) gnl3l (ENSSPAG00000021373) tfe3b (ENSSPAG00000021389) cxxc1b (ENSSPAG00000021410) mbd1b (ENSSPAG00000021447) ccdc120b (ENSSPAG00000021482) SRPK3 (ENSSPAG00000021517) comtb (ENSSPAG00000021543) grm6b (ENSSPAG00000021631) ##22 traip (ENSSPAG00000021659) mon1a (ENSSPAG00000021702) ENSSPAG00000021727 Cichlidae ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Haplochromini ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Haplochromini_A ANCESTRAL SPECIES ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000179368 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a P. nyererei DUPLICATION P. nyererei MODERN SPECIES 685 cxxc1b (ENSPNYG00000015904) ccdc120b (ENSPNYG00000015866) SRPK3 (ENSPNYG00000015849) comtb (ENSPNYG00000015834) ENSPNYG00000015823 ##22 grm6b (ENSPNYG00000015798) ##22 ENSPNYG00000015758 mon1a (ENSPNYG00000015733) ENSPNYG00000015609 camkvb (ENSPNYG00000015516) ENSPNYG00000015496 SEMA3F (ENSPNYG00000015463) arl8bb (ENSPNYG00000015445) ENSPNYG00000015394 P. nyererei MODERN SPECIES 685 cxxc1b (ENSPNYG00000015904) ccdc120b (ENSPNYG00000015866) SRPK3 (ENSPNYG00000015849) comtb (ENSPNYG00000015834) ENSPNYG00000015823 ##22 grm6b (ENSPNYG00000015798) ##22 ENSPNYG00000015758 mon1a (ENSPNYG00000015733) ENSPNYG00000015609 camkvb (ENSPNYG00000015516) ENSPNYG00000015496 SEMA3F (ENSPNYG00000015463) arl8bb (ENSPNYG00000015445) ENSPNYG00000015394 Haplochromini_B ANCESTRAL SPECIES ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000179368 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Zebra mbuna MODERN SPECIES 1108 adnpa (ENSMZEG00005010188) ENSMZEG00005010193 gata1a (ENSMZEG00005010202) si:dkey-13a21.4 (ENSMZEG00005010220) ENSMZEG00005010225 opn1sw2 (ENSMZEG00005010240) opn1sw2 (ENSMZEG00005010258) opn1lw1 (ENSMZEG00005010329) gnl3l (ENSMZEG00005010346) tfe3b (ENSMZEG00005010367) cxxc1b (ENSMZEG00005010397) mbd1b (ENSMZEG00005010421) ccdc120b (ENSMZEG00005010446) SRPK3 (ENSMZEG00005010462) comtb (ENSMZEG00005010499) grm6b (ENSMZEG00005010508) ##22 traip (ENSMZEG00005010532) mon1a (ENSMZEG00005010548) ENSMZEG00005010556 camkvb (ENSMZEG00005010584) ENSMZEG00005010650 SEMA3F (ENSMZEG00005010665) arl8bb (ENSMZEG00005010708) ENSMZEG00005010716 ENSMZEG00005010728 ENSMZEG00005010740 ip6k2a (ENSMZEG00005010798) ENSMZEG00005010825 cidec (ENSMZEG00005010835) ENSMZEG00005010867 uqcrc1 (ENSMZEG00005010878) Eastern happy MODERN SPECIES 17 adnpa (ENSACLG00000021065) gata1a (ENSACLG00000021090) si:dkey-13a21.4 (ENSACLG00000021109) ENSACLG00000021128 opn1sw2 (ENSACLG00000021147) opn1sw2 (ENSACLG00000021193) opn1lw1 (ENSACLG00000021226) gnl3l (ENSACLG00000021244) tfe3b (ENSACLG00000021271) cxxc1b (ENSACLG00000021315) mbd1b (ENSACLG00000021383) ENSACLG00000021406 ccdc120b (ENSACLG00000021415) SRPK3 (ENSACLG00000021452) comtb (ENSACLG00000021475) grm6b (ENSACLG00000021488) ##22 traip (ENSACLG00000021544) mon1a (ENSACLG00000021606) ENSACLG00000021639 camkvb (ENSACLG00000021669) ENSACLG00000021691 SEMA3F (ENSACLG00000021730) ENSACLG00000021860 arl8bb (ENSACLG00000021872) ENSACLG00000021909 bhlhe40 (ENSACLG00000021923) ITPR1 (ENSACLG00000021949) setmar (ENSACLG00000022175) lrrn1 (ENSACLG00000022186) ENSACLG00000022197 ENSACLG00000022206 Burton s mouthbrooder MODERN SPECIES 279 adnpa (ENSHBUG00000014001) ENSHBUG00000013989 gata1a (ENSHBUG00000014016) si:dkey-13a21.4 (ENSHBUG00000014023) hcfc1a (ENSHBUG00000014047) opn1sw2 (ENSHBUG00000014102) opn1sw2 (ENSHBUG00000014119) opn1lw1 (ENSHBUG00000014159) gnl3l (ENSHBUG00000014227) tfe3b (ENSHBUG00000014246) cxxc1b (ENSHBUG00000014254) mbd1b (ENSHBUG00000014270) ccdc120b (ENSHBUG00000014281) SRPK3 (ENSHBUG00000014340) comtb (ENSHBUG00000014357) grm6b (ENSHBUG00000014416) ##22 traip (ENSHBUG00000014431) mon1a (ENSHBUG00000014446) ENSHBUG00000014460 camkvb (ENSHBUG00000014473) SEMA3F (ENSHBUG00000014574) arl8bb (ENSHBUG00000014610) ENSHBUG00000014622 Lyretail cichlid MODERN SPECIES 296 MAFB (ENSNBRG00000023180) adnpa (ENSNBRG00000023187) ENSNBRG00000023195 gata1a (ENSNBRG00000023206) si:dkey-13a21.4 (ENSNBRG00000023214) ENSNBRG00000023227 opn1sw2 (ENSNBRG00000023236) opn1sw2 (ENSNBRG00000023247) opn1lw1 (ENSNBRG00000023323) gnl3l (ENSNBRG00000023334) tfe3b (ENSNBRG00000023362) cxxc1b (ENSNBRG00000023408) ccdc120b (ENSNBRG00000023464) ENSNBRG00000023479 comtb (ENSNBRG00000023483) grm6b (ENSNBRG00000023489) ##22 traip (ENSNBRG00000023496) ENSNBRG00000023505 camkvb (ENSNBRG00000023513) SEMA3F (ENSNBRG00000023532) arl8bb (ENSNBRG00000023542) ENSNBRG00000023549 BHLHE40 (ENSNBRG00000023554) ITPR1 (ENSNBRG00000023567) setmar (ENSNBRG00000023590) lrrn1 (ENSNBRG00000023596) ENSNBRG00000023604 trnt1 (ENSNBRG00000023606) arl6ip5a (ENSNBRG00000023616) FRMD4B (ENSNBRG00000023651) mitfa (ENSNBRG00000023738) Nile tilapia MODERN SPECIES 17 ENSONIG00000020300 ENSONIG00000028248 ENSONIG00000020298 gata1a (ENSONIG00000020297) si:dkey-13a21.4 (ENSONIG00000020296) hcfc1a (ENSONIG00000020295) opn1sw2 (ENSONIG00000020294) opn1sw2 (ENSONIG00000020293) opn1lw1 (ENSONIG00000020292) gnl3l (ENSONIG00000029260) tfe3b (ENSONIG00000020291) cxxc1b (ENSONIG00000020290) ccdc120b (ENSONIG00000020288) SRPK3 (ENSONIG00000020287) comtb (ENSONIG00000020286) grm6b (ENSONIG00000020285) ##22 traip (ENSONIG00000020284) mon1a (ENSONIG00000020283) ENSONIG00000020282 camkvb (ENSONIG00000036268) SEMA3F (ENSONIG00000020280) ENSONIG00000028560 arl8bb (ENSONIG00000020279) NAAA (ENSONIG00000020278) bhlhe40 (ENSONIG00000020277) ITPR1 (ENSONIG00000020276) setmar (ENSONIG00000020275) lrrn1 (ENSONIG00000020810) ENSONIG00000020274 trnt1 (ENSONIG00000020273) arl6ip5a (ENSONIG00000029243) Midas cichlid MODERN SPECIES 1043 adnpa (ENSACIG00000011073) ENSACIG00000011059 gata1a (ENSACIG00000011048) si:dkey-13a21.4 (ENSACIG00000011024) ENSACIG00000011009 opn1sw2 (ENSACIG00000010993) opn1sw2 (ENSACIG00000010980) opn1lw1 (ENSACIG00000010960) gnl3l (ENSACIG00000010900) tfe3b (ENSACIG00000010840) cxxc1b (ENSACIG00000010624) mbd1b (ENSACIG00000010590) ccdc120b (ENSACIG00000010542) SRPK3 (ENSACIG00000010338) comtb (ENSACIG00000010204) grm6b (ENSACIG00000010172) ##22 traip (ENSACIG00000010020) mon1a (ENSACIG00000009986) MST1R (ENSACIG00000009876) camkvb (ENSACIG00000009801) SEMA3F (ENSACIG00000009744) arl8bb (ENSACIG00000009595) NAAA (ENSACIG00000009524) bhlhe40 (ENSACIG00000009498) ENSACIG00000009416 ENSACIG00000009395 ITPR1 (ENSACIG00000009297) setmar (ENSACIG00000009270) Atherinomorphae ANCESTRAL SPECIES 2 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Aplocheiloidei ANCESTRAL SPECIES 76 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d Mangrove rivulus MODERN SPECIES 139 BCL2L1 (ENSKMAG00000021065) gata1a (ENSKMAG00000021051) si:dkey-13a21.4 (ENSKMAG00000021039) hcfc1a (ENSKMAG00000020984) opn1sw2 (ENSKMAG00000020951) opn1lw1 (ENSKMAG00000020908) gnl3l (ENSKMAG00000020874) tfe3b (ENSKMAG00000020858) ENSKMAG00000020845 cxxc1b (ENSKMAG00000020802) mbd1b (ENSKMAG00000020760) ccdc120b (ENSKMAG00000020721) SRPK3 (ENSKMAG00000020698) ENSKMAG00000020685 comtb (ENSKMAG00000020662) grm6b (ENSKMAG00000020636) ##22 traip (ENSKMAG00000020606) mon1a (ENSKMAG00000020581) ENSKMAG00000020521 camkvb (ENSKMAG00000020494) SEMA3F (ENSKMAG00000020412) arl8bb (ENSKMAG00000020329) ENSKMAG00000020310 bhlhe40 (ENSKMAG00000020298) ITPR1 (ENSKMAG00000020220) setmar (ENSKMAG00000020186) lrrn1 (ENSKMAG00000020176) Turquoise killifish MODERN SPECIES 1619 BCL2L1 (ENSNFUG00015015141) GATA1A (ENSNFUG00015015117) si:dkey-13a21.4 (ENSNFUG00015015097) HCFC1 (ENSNFUG00015014937) opn1sw2 (ENSNFUG00015014885) opn1sw2 (ENSNFUG00015014824) ENSNFUG00015014685 Nfu_g_1_021486 (ENSNFUG00015014616) GNL3L (ENSNFUG00015014553) tfe3b (ENSNFUG00015014314) CXXC1 (ENSNFUG00015014008) ENSNFUG00015013989 CCDC120 (ENSNFUG00015013984) SRPK3 (ENSNFUG00015013920) COMTB (ENSNFUG00015013912) grm6b (ENSNFUG00015013210) ##22 TRAIP (ENSNFUG00015013172) MON1A (ENSNFUG00015013166) ENSNFUG00015013156 ITGA5 (ENSNFUG00015013119) BIN2B (ENSNFUG00015013099) TXNRD1 (ENSNFUG00015010795) CHST13 (ENSNFUG00015010692) SLC41A3 (ENSNFUG00015010690) ENSNFUG00015010685 ENSNFUG00015010670 acot8 (ENSNFUG00015010580) IFT52 (ENSNFUG00015019857) MYBL2 (ENSNFUG00015019626) rpn2 (ENSNFUG00015019399) GHRH (ENSNFUG00015019390) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b.s ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a NAME_4 ANCESTRAL SPECIES 63 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b.s ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 Mummichog MODERN SPECIES 313 tfe3b (ENSFHEG00000020182) cxxc1b (ENSFHEG00000020144) mbd1b (ENSFHEG00000020120) ccdc120b (ENSFHEG00000020101) ENSFHEG00000020017 comtb (ENSFHEG00000020002) grm6b (ENSFHEG00000019995) ##22 traip (ENSFHEG00000019960) mon1a (ENSFHEG00000019845) ENSFHEG00000019818 camkvb (ENSFHEG00000019743) SEMA3F (ENSFHEG00000019657) ENSFHEG00000019608 arl8bb (ENSFHEG00000019579) ENSFHEG00000019555 NAAA (ENSFHEG00000019547) bhlhe40 (ENSFHEG00000019542) ITPR1 (ENSFHEG00000019522) setmar (ENSFHEG00000019347) lrrn1 (ENSFHEG00000019336) ENSFHEG00000019332 ENSFHEG00000019322 Sheepshead minnow MODERN SPECIES 141 gata1a (ENSCVAG00000001149) si:dkey-13a21.4 (ENSCVAG00000001150) hcfc1a (ENSCVAG00000001152) opn1sw2 (ENSCVAG00000000046) opn1sw2 (ENSCVAG00000001155) ENSCVAG00000001006 ENSCVAG00000001157 ENSCVAG00000001159 gnl3l (ENSCVAG00000001161) tfe3b (ENSCVAG00000001163) cxxc1b (ENSCVAG00000001165) mbd1b (ENSCVAG00000001167) ccdc120b (ENSCVAG00000001169) SRPK3 (ENSCVAG00000001172) comtb (ENSCVAG00000001175) grm6b (ENSCVAG00000001176) ##22 traip (ENSCVAG00000001182) mon1a (ENSCVAG00000001185) ENSCVAG00000001188 camkvb (ENSCVAG00000001192) SEMA3F (ENSCVAG00000000915) sfswap (ENSCVAG00000001205) ENSCVAG00000001208 TRABD2A (ENSCVAG00000001210) HOOK3 (ENSCVAG00000001222) rnf170 (ENSCVAG00000001227) gpn3 (ENSCVAG00000001234) arpc3 (ENSCVAG00000001238) ENSCVAG00000001246 ENSCVAG00000001252 RIMBP2 (ENSCVAG00000001256) Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b.s.b ENSGT01030000234549.a.a.a.b.s.a ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 ENSGT01050000244882.b.c.a.a ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000155071.C ENSGT00940000177280 Poecilia ANCESTRAL SPECIES 20 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b.s.b ENSGT01030000234549.a.a.a.b.s.a ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00940000165164.b.j ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 ENSGT01050000244882.b.c.a.a ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000155071.C NAME_6 ANCESTRAL SPECIES 141 ENSGT01030000234549.a.a.a.b.s.a ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00940000165164.b.j ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 ENSGT01050000244882.b.c.a.a ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000155071.C ENSGT00940000158384.d Amazon molly MODERN SPECIES 430 ENSPFOG00000008152 gnl3l (ENSPFOG00000007874) tfe3b (ENSPFOG00000007817) cxxc1b (ENSPFOG00000007618) mbd1b (ENSPFOG00000007511) ccdc120b (ENSPFOG00000007506) comtb (ENSPFOG00000007504) grm6b (ENSPFOG00000007313) ##22 traip (ENSPFOG00000007180) ENSPFOG00000007170 mon1a (ENSPFOG00000007130) ENSPFOG00000006925 camkvb (ENSPFOG00000006783) mitfa (ENSPFOG00000006677) FRMD4B (ENSPFOG00000006321) arl6ip5a (ENSPFOG00000006253) arl6ip5a (ENSPFOG00000006251) trnt1 (ENSPFOG00000006194) ENSPFOG00000006189 ENSPFOG00000006181 lrrn1 (ENSPFOG00000020409) setmar (ENSPFOG00000006180) ITPR1 (ENSPFOG00000004491) Sailfin molly MODERN SPECIES 886 ENSPLAG00000021152 gnl3l (ENSPLAG00000021161) tfe3b (ENSPLAG00000021183) cxxc1b (ENSPLAG00000021242) mbd1b (ENSPLAG00000021258) ccdc120b (ENSPLAG00000000459) SRPK3 (ENSPLAG00000021368) comtb (ENSPLAG00000021472) grm6b (ENSPLAG00000021493) ##22 traip (ENSPLAG00000021502) ENSPLAG00000021525 mon1a (ENSPLAG00000021533) ENSPLAG00000021615 Guppy MODERN SPECIES 457 gata1a (ENSPREG00000022245) si:dkey-13a21.4 (ENSPREG00000022241) hcfc1a (ENSPREG00000022223) opn1sw2 (ENSPREG00000022208) opn1sw2 (ENSPREG00000022188) ENSPREG00000022153 ENSPREG00000022087 ENSPREG00000022016 gnl3l (ENSPREG00000021994) tfe3b (ENSPREG00000021875) cxxc1b (ENSPREG00000021824) mbd1b (ENSPREG00000021805) ccdc120b (ENSPREG00000021798) SRPK3 (ENSPREG00000021760) comtb (ENSPREG00000021730) grm6b (ENSPREG00000021714) ##22 traip (ENSPREG00000021665) ENSPREG00000021636 mon1a (ENSPREG00000021632) ENSPREG00000021618 ENSPREG00000021586 camkvb (ENSPREG00000021561) mitfa (ENSPREG00000021528) FRMD4B (ENSPREG00000021492) arl6ip5a (ENSPREG00000021482) ENSPREG00000021478 trnt1 (ENSPREG00000021470) ENSPREG00000021464 ENSPREG00000021460 lrrn1 (ENSPREG00000021458) ENSPREG00000021441 Platyfish MODERN SPECIES 12 SYNPR (ENSXMAG00000021931) zbtb49 (ENSXMAG00000021595) lyar (ENSXMAG00000002067) TMEM128 (ENSXMAG00000026106) OTOP1 (ENSXMAG00000002077) ENSXMAG00000020065 SLC2A9 (ENSXMAG00000002081) WDR1 (ENSXMAG00000002092) idh3b (ENSXMAG00000002101) ptpra (ENSXMAG00000002115) gnrh2 (ENSXMAG00000002133) ENSXMAG00000002135 ENSXMAG00000002136 ENSXMAG00000002137 ENSXMAG00000002143 grm6b (ENSXMAG00000002147) ##22 traip (ENSXMAG00000002153) mon1a (ENSXMAG00000002162) ENSXMAG00000002163 camkvb (ENSXMAG00000002182) mitfa (ENSXMAG00000002200) ENSXMAG00000002210 arl6ip5a (ENSXMAG00000002223) ENSXMAG00000002226 trnt1 (ENSXMAG00000002227) ENSXMAG00000027163 ENSXMAG00000028634 lrrn1 (ENSXMAG00000020066) setmar (ENSXMAG00000029083) ITPR1 (ENSXMAG00000008118) ENSXMAG00000021673 Oryzias ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154697.a.b ENSGT00940000158384.c ENSGT00940000155071.D ENSGT00940000179168 ENSGT00390000008983.a ENSGT00940000157154.c ENSGT00940000165984 ENSGT00940000176938 ENSGT00950000182897.A ENSGT00940000156561.a.b.b Oryzias_b ANCESTRAL SPECIES 3 ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154697.a.b ENSGT00940000158384.c ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00940000157154.c ENSGT00940000165984 ENSGT00940000176938 ENSGT00950000182897.A ENSGT00940000156561.a.b.b ENSGT00940000154578.A.c.a.h Indian medaka MODERN SPECIES 8 adnpa (ENSOMEG00000023725) ENSOMEG00000023723 gata1a (ENSOMEG00000023720) opn1sw2 (ENSOMEG00000023716) ENSOMEG00000023708 opn1sw2 (ENSOMEG00000023704) opn1lw1 (ENSOMEG00000023693) gnl3l (ENSOMEG00000023685) tfe3b (ENSOMEG00000023677) cxxc1b (ENSOMEG00000023668) mbd1b (ENSOMEG00000023660) ccdc120b (ENSOMEG00000023649) ENSOMEG00000023641 ENSOMEG00000023630 comtb (ENSOMEG00000023614) grm6b (ENSOMEG00000023604) ##22 traip (ENSOMEG00000023576) mon1a (ENSOMEG00000023547) ENSOMEG00000023525 camkvb (ENSOMEG00000023496) ormdl1 (ENSOMEG00000023479) ENSOMEG00000023475 SEMA3F (ENSOMEG00000023448) tomm34 (ENSOMEG00000023382) BHLHE40 (ENSOMEG00000023321) ITPR1 (ENSOMEG00000023274) sumf1 (ENSOMEG00000023220) lrrn1 (ENSOMEG00000023199) ENSOMEG00000023179 ENSOMEG00000023139 zc3h10 (ENSOMEG00000023135) Javanese ricefish MODERN SPECIES 19 adnpa (ENSOJAG00000021497) ENSOJAG00000021490 gata1a (ENSOJAG00000021488) si:dkey-13a21.4 (ENSOJAG00000021482) hcfc1a (ENSOJAG00000021155) opn1sw2 (ENSOJAG00000021110) ENSOJAG00000021068 ENSOJAG00000021046 gnl3l (ENSOJAG00000021019) tfe3b (ENSOJAG00000020986) cxxc1b (ENSOJAG00000020840) mbd1b (ENSOJAG00000020799) ccdc120b (ENSOJAG00000020787) SRPK3 (ENSOJAG00000020679) comtb (ENSOJAG00000020667) grm6b (ENSOJAG00000020220) ##22 traip (ENSOJAG00000020144) mon1a (ENSOJAG00000020130) ENSOJAG00000020111 camkvb (ENSOJAG00000020021) SEMA3F (ENSOJAG00000019102) tomm34 (ENSOJAG00000018996) BHLHE40 (ENSOJAG00000018979) sumf1 (ENSOJAG00000018036) lrrn1 (ENSOJAG00000018020) ENSOJAG00000018007 ENSOJAG00000017985 zc3h10 (ENSOJAG00000017976) ENSOJAG00000017223 ENSOJAG00000017169 ANKRD52 (ENSOJAG00000016587) Oryzias_a ANCESTRAL SPECIES 5 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT00940000166196 ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154697.a.b ENSGT00940000158384.c ENSGT00940000155071.D ENSGT00940000179168 ENSGT00390000008983.a ENSGT00940000157154.c ENSGT00940000165984 ENSGT00940000156246.d ENSGT00950000182897.A ENSGT00940000156561.a.b.b Chinese medaka MODERN SPECIES 655 adnpa (ENSOSIG00000009297) BCL2L1 (ENSOSIG00000009295) gata1a (ENSOSIG00000009293) si:dkey-13a21.4 (ENSOSIG00000009290) hcfc1a (ENSOSIG00000009288) opn1sw2 (ENSOSIG00000009284) opn1sw2 (ENSOSIG00000009282) ENSOSIG00000009264 gnl3l (ENSOSIG00000008975) tfe3b (ENSOSIG00000008770) cxxc1b (ENSOSIG00000008735) ENSOSIG00000008731 ccdc120b (ENSOSIG00000008730) SRPK3 (ENSOSIG00000006352) comtb (ENSOSIG00000006338) grm6b (ENSOSIG00000006276) ##22 traip (ENSOSIG00000006266) mon1a (ENSOSIG00000006264) ENSOSIG00000006262 camkvb (ENSOSIG00000006258) tomm34 (ENSOSIG00000004563) BHLHE40 (ENSOSIG00000004561) ITPR1 (ENSOSIG00000004278) sumf1 (ENSOSIG00000002024) lrrn1 (ENSOSIG00000001976) ENSOSIG00000001970 ENSOSIG00000001961 zc3h10 (ENSOSIG00000001956) ESYT1 (ENSOSIG00000001259) ENSOSIG00000001253 npepl1 (ENSOSIG00000001035) Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000024903 gata1a (ENSORLG00000013980) si:dkey-13a21.4 (ENSORLG00000025098) hcfc1a (ENSORLG00000014012) kfh-b (ENSORLG00000028370) ENSORLG00000014058 kfh-r (ENSORLG00000014088) gnl3l (ENSORLG00000014117) tfe3b (ENSORLG00000014134) ENSORLG00000029478 cxxc1b (ENSORLG00000014161) mbd1b (ENSORLG00000029390) ccdc120b (ENSORLG00000014183) ENSORLG00000014212 comtb (ENSORLG00000014228) grm6b (ENSORLG00000014253) ##22 traip (ENSORLG00000014261) mon1a (ENSORLG00000014273) ENSORLG00000014291 camkvb (ENSORLG00000014299) ENSORLG00000014370 tomm34 (ENSORLG00000014386) bhlhe40 (ENSORLG00000014397) ITPR1 (ENSORLG00000014557) ENSORLG00000029017 sumf1 (ENSORLG00000014571) lrrn1 (ENSORLG00000014579) ENSORLG00000014588 ENSORLG00000024075 zc3h10 (ENSORLG00000014596) ENSORLG00000014612 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Eupercaria ANCESTRAL SPECIES ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000160486.d ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l.a ENSGT00940000166313.a ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00390000011581.c ENSGT00940000156091.b ENSGT00390000002635 ENSGT00940000169850 Tetraodon MODERN SPECIES 2 MAFB (ENSTNIG00000007316) ENSTNIG00000000511 adnpa (ENSTNIG00000007317) BCL2L1 (ENSTNIG00000007318) gata1a (ENSTNIG00000007319) hcfc1a (ENSTNIG00000007320) opn1sw2 (ENSTNIG00000007321) opn1lw1 (ENSTNIG00000007322) gnl3l (ENSTNIG00000007323) tfe3b (ENSTNIG00000007324) cxxc1b (ENSTNIG00000007325) ENSTNIG00000007326 ccdc120b (ENSTNIG00000007327) SRPK3 (ENSTNIG00000007328) comtb (ENSTNIG00000007329) grm6b (ENSTNIG00000007330) ##22 traip (ENSTNIG00000007331) mon1a (ENSTNIG00000007332) MST1R (ENSTNIG00000007333) camkvb (ENSTNIG00000007334) SEMA3F (ENSTNIG00000007335) arl8bb (ENSTNIG00000007336) NAAA (ENSTNIG00000007337) bhlhe40 (ENSTNIG00000007338) ITPR1 (ENSTNIG00000007339) lrrn1 (ENSTNIG00000007340) mybl2b (ENSTNIG00000007341) rpn2 (ENSTNIG00000007342) ENSTNIG00000007343 cdk5rap1 (ENSTNIG00000007344) ENSTNIG00000007345 Fugu MODERN SPECIES 10 ENSTRUG00000012597 adnpa (ENSTRUG00000033492) ENSTRUG00000030489 BCL2L1 (ENSTRUG00000012724) gata1a (ENSTRUG00000012781) hcfc1a (ENSTRUG00000012807) opn1sw2 (ENSTRUG00000013002) opn1lw1 (ENSTRUG00000013052) gnl3l (ENSTRUG00000013131) tfe3b (ENSTRUG00000013198) cxxc1b (ENSTRUG00000013293) mbd1b (ENSTRUG00000013422) ccdc120b (ENSTRUG00000013456) SRPK3 (ENSTRUG00000029636) comtb (ENSTRUG00000013666) grm6b (ENSTRUG00000013670) ##22 traip (ENSTRUG00000013872) mon1a (ENSTRUG00000013941) ENSTRUG00000013975 camkvb (ENSTRUG00000014152) SEMA3F (ENSTRUG00000014242) arl8bb (ENSTRUG00000011496) NAAA (ENSTRUG00000014493) bhlhe40 (ENSTRUG00000020385) ITPR1 (ENSTRUG00000023819) setmar (ENSTRUG00000021227) lrrn1 (ENSTRUG00000014946) ENSTRUG00000027705 ift52 (ENSTRUG00000014953) mybl2b (ENSTRUG00000021040) rpn2 (ENSTRUG00000014997) Eupecaria_A ANCESTRAL SPECIES ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Ballan wrasse MODERN SPECIES 61 ENSLBEG00000017986 adnpa (ENSLBEG00000018017) BCL2L1 (ENSLBEG00000018039) gata1a (ENSLBEG00000018106) hcfc1a (ENSLBEG00000018128) si:dkey-13a21.4 (ENSLBEG00000018180) opn1sw2 (ENSLBEG00000018213) ENSLBEG00000018236 gnl3l (ENSLBEG00000018256) tfe3b (ENSLBEG00000018288) cxxc1b (ENSLBEG00000018337) ENSLBEG00000018506 ccdc120b (ENSLBEG00000018545) SRPK3 (ENSLBEG00000018572) comtb (ENSLBEG00000018603) grm6b (ENSLBEG00000018623) ##22 traip (ENSLBEG00000018662) mon1a (ENSLBEG00000018702) MST1R (ENSLBEG00000018750) camkvb (ENSLBEG00000018889) SEMA3F (ENSLBEG00000018957) arl8bb (ENSLBEG00000019016) NAAA (ENSLBEG00000019157) bhlhe40 (ENSLBEG00000019219) ITPR1 (ENSLBEG00000019256) setmar (ENSLBEG00000019413) lrrn1 (ENSLBEG00000019424) ENSLBEG00000019439 trnt1 (ENSLBEG00000019457) arl6ip5a (ENSLBEG00000019488) FRMD4B (ENSLBEG00000019520) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Perciformes ANCESTRAL SPECIES ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Perciformes_a ANCESTRAL SPECIES 27 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Channel bull blenny MODERN SPECIES 19 BCL2L1 (ENSCGOG00000001425) gata1a (ENSCGOG00000001418) si:dkey-13a21.4 (ENSCGOG00000001417) hcfc1a (ENSCGOG00000001124) opn1sw2 (ENSCGOG00000001101) opn1sw2 (ENSCGOG00000001089) opn1lw1 (ENSCGOG00000001051) gnl3l (ENSCGOG00000001042) tfe3b (ENSCGOG00000001023) cxxc1a (ENSCGOG00000000995) ENSCGOG00000000992 ENSCGOG00000000965 ccdc120b (ENSCGOG00000000963) SRPK3 (ENSCGOG00000000936) comtb (ENSCGOG00000000932) grm6b (ENSCGOG00000000769) ##22 traip (ENSCGOG00000000727) mon1a (ENSCGOG00000000725) ENSCGOG00000000720 camkvb (ENSCGOG00000000660) SEMA3F (ENSCGOG00000000535) arl8bb (ENSCGOG00000023683) NAAA (ENSCGOG00000023679) bhlhe40 (ENSCGOG00000023677) ENSCGOG00000023674 ITPR1 (ENSCGOG00000021328) setmar (ENSCGOG00000021226) lrrn1 (ENSCGOG00000021224) ENSCGOG00000021223 trnt1 (ENSCGOG00000021203) arl6ip5a (ENSCGOG00000021199) Pike perch MODERN SPECIES 11 gata1a (ENSSLUG00000021830) si:dkey-13a21.4 (ENSSLUG00000021834) hcfc1a (ENSSLUG00000021854) opn1sw2 (ENSSLUG00000021888) ENSSLUG00000021893 ENSSLUG00000021896 ENSSLUG00000021899 ENSSLUG00000021917 gnl3l (ENSSLUG00000021972) tfe3b (ENSSLUG00000022004) CXXC1 (ENSSLUG00000022049) mbd1b (ENSSLUG00000022140) ccdc120b (ENSSLUG00000022153) SRPK3 (ENSSLUG00000022192) comtb (ENSSLUG00000022361) grm6b (ENSSLUG00000022374) ##22 traip (ENSSLUG00000022387) mon1a (ENSSLUG00000022403) ENSSLUG00000022410 camkvb (ENSSLUG00000005084) SEMA3F (ENSSLUG00000005295) arl8bb (ENSSLUG00000007380) NAAA (ENSSLUG00000007391) bhlhe40 (ENSSLUG00000007397) ITPR1 (ENSSLUG00000007574) setmar (ENSSLUG00000010262) lrrn1 (ENSSLUG00000010263) ENSSLUG00000010265 trnt1 (ENSSLUG00000010274) arl6ip5a (ENSSLUG00000010291) FRMD4B (ENSSLUG00000010314) Cottioidei ANCESTRAL SPECIES ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000161383.d.a ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000181969 ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Lumpfish MODERN SPECIES 20 si:dkey-13a21.4 (ENSCLMG00005013104) HCFC1 (ENSCLMG00005012898) opn1sw2 (ENSCLMG00005012893) opn1sw2 (ENSCLMG00005012891) opn1lw1 (ENSCLMG00005012888) gnl3l (ENSCLMG00005012879) tfe3b (ENSCLMG00005012790) ENSCLMG00005012788 cxxc1b (ENSCLMG00005012498) ENSCLMG00005012492 ccdc120b (ENSCLMG00005012490) ENSCLMG00005012489 ENSCLMG00005012487 SRPK3 (ENSCLMG00005012486) comtb (ENSCLMG00005012436) grm6b (ENSCLMG00005012426) ##22 traip (ENSCLMG00005012422) mon1a (ENSCLMG00005012421) ENSCLMG00005012418 camkvb (ENSCLMG00005012417) SEMA3F (ENSCLMG00005012021) arl8bb (ENSCLMG00005012010) NAAA (ENSCLMG00005012008) ENSCLMG00005012006 tpra1 (ENSCLMG00005011990) ENSCLMG00005011985 PLXNA1 (ENSCLMG00005003300) ENSCLMG00005003064 ENSCLMG00005003038 ENSCLMG00005003023 EVC2 (ENSCLMG00005003008) Stickleback MODERN SPECIES 17 edem1 (ENSGACG00000012289) arl8ba (ENSGACG00000012267) ENSGACG00000012265 ddi2 (ENSGACG00000012259) cplane2 (ENSGACG00000012256) epha2a (ENSGACG00000012225) H6PD (ENSGACG00000012197) cenps (ENSGACG00000012180) tardbpb (ENSGACG00000012164) gnb1b (ENSGACG00000012145) cxxc1b (ENSGACG00000012117) ENSGACG00000012106 ccdc120b (ENSGACG00000012102) SRPK3 (ENSGACG00000012098) comtb (ENSGACG00000012090) grm6b (ENSGACG00000012070) ##22 traip (ENSGACG00000012044) mon1a (ENSGACG00000012037) ENSGACG00000012007 camkvb (ENSGACG00000011998) SEMA3F (ENSGACG00000011989) arl8bb (ENSGACG00000011972) NAAA (ENSGACG00000011964) ENSGACG00000011962 bhlhe40 (ENSGACG00000011940) ITPR1 (ENSGACG00000011921) setmar (ENSGACG00000011919) lrrn1 (ENSGACG00000011915) trnt1 (ENSGACG00000011903) arl6ip5a (ENSGACG00000011898) FRMD4B (ENSGACG00000011892) Eupecaria_C ANCESTRAL SPECIES ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Gilthead seabream MODERN SPECIES 20 ENSSAUG00010014348 BCL2L (ENSSAUG00010014353) gata1a (ENSSAUG00010014355) si:dkey-13a21.4 (ENSSAUG00010014358) hcfc1a (ENSSAUG00010014373) opn1sw2 (ENSSAUG00010014432) opn1sw2 (ENSSAUG00010014437) opn1lw1 (ENSSAUG00010014442) gnl3l (ENSSAUG00010014448) tfe3b (ENSSAUG00010014478) cxxc1b (ENSSAUG00010014492) mbd1b (ENSSAUG00010014539) ccdc120b (ENSSAUG00010014546) SRPK3 (ENSSAUG00010014567) comtb (ENSSAUG00010017170) grm6b (ENSSAUG00010017188) ##22 traip (ENSSAUG00010017395) mon1a (ENSSAUG00010017406) ENSSAUG00010017412 camkvb (ENSSAUG00010017420) SEMA3F (ENSSAUG00010017498) arl8bb (ENSSAUG00010018930) ENSSAUG00010018932 bhlhe40 (ENSSAUG00010018934) ITPR1 (ENSSAUG00010018947) setmar (ENSSAUG00010020167) lrrn1 (ENSSAUG00010020168) ENSSAUG00010020169 trnt1 (ENSSAUG00010020172) arl6ip5a (ENSSAUG00010020174) FRMD4B (ENSSAUG00010020175) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Large yellow croaker MODERN SPECIES pdzrn3b (ENSLCRG00005000512) ppp4r2b (ENSLCRG00005000505) gxylt2 (ENSLCRG00005000503) shq1 (ENSLCRG00005000499) RYBP (ENSLCRG00005000497) prok2 (ENSLCRG00005000494) gpr27 (ENSLCRG00005000493) EIF4E3 (ENSLCRG00005000492) foxp1b (ENSLCRG00005000348) zgc:113054 (ENSLCRG00005000288) mitfa (ENSLCRG00005000244) mbd1b (ENSLCRG00005000194) ccdc120b (ENSLCRG00005000159) SRPK3 (ENSLCRG00005000084) comtb (ENSLCRG00005023001) grm6b (ENSLCRG00005022971) ##22 traip (ENSLCRG00005022970) mon1a (ENSLCRG00005022969) ENSLCRG00005022968 camkvb (ENSLCRG00005022967) SEMA3F (ENSLCRG00005022633) ENSLCRG00005022615 arl8bb (ENSLCRG00005022612) ENSLCRG00005022610 NAAA (ENSLCRG00005022608) bhlhe40 (ENSLCRG00005022605) ITPR1 (ENSLCRG00005022437) setmar (ENSLCRG00005022422) ENSLCRG00005022421 trnt1 (ENSLCRG00005022420) arl6ip5a (ENSLCRG00005022419) European seabass MODERN SPECIES 10 MAFB (ENSDLAG00005029273) adnpa (ENSDLAG00005025737) ENSDLAG00005025736 gata1a (ENSDLAG00005025735) RAB7A (ENSDLAG00005031533) hcfc1a (ENSDLAG00005025731) opn1sw2 (ENSDLAG00005025729) opn1sw2 (ENSDLAG00005025726) opn1lw1 (ENSDLAG00005025724) gnl3l (ENSDLAG00005025705) tfe3b (ENSDLAG00005025703) ENSDLAG00005025682 mbd1b (ENSDLAG00005025679) ccdc120b (ENSDLAG00005025677) ENSDLAG00005025559 grm6b (ENSDLAG00005025480) ##22 traip (ENSDLAG00005025462) ENSDLAG00005025454 CAMKV (ENSDLAG00005025437) ENSDLAG00005025304 ARL8B (ENSDLAG00005034963) ENSDLAG00005025286 bhlhe40 (ENSDLAG00005025285) ITPR1 (ENSDLAG00005024685) setmar (ENSDLAG00005032118) LRRN1 (ENSDLAG00005032471) trnt1 (ENSDLAG00005026509) arl6ip5a (ENSDLAG00005024563) FRMD4B (ENSDLAG00005024483) mitfa (ENSDLAG00005024449) ENSDLAG00005028768 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Carangaria ANCESTRAL SPECIES 3 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.b ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a ENSGT00940000156326.a.b Turbot MODERN SPECIES 18 ENSSMAG00000013917 ENSSMAG00000028451 gata1a (ENSSMAG00000013930) si:dkey-13a21.4 (ENSSMAG00000013945) hcfc1a (ENSSMAG00000013953) opn1sw2 (ENSSMAG00000014006) opn1sw2 (ENSSMAG00000014457) opn1lw1 (ENSSMAG00000014476) gnl3l (ENSSMAG00000014518) tfe3b (ENSSMAG00000014563) cxxc1b (ENSSMAG00000014604) mbd1b (ENSSMAG00000014640) ccdc120b (ENSSMAG00000014764) ENSSMAG00000014783 comtb (ENSSMAG00000014805) grm6b (ENSSMAG00000014847) ##22 traip (ENSSMAG00000014911) mon1a (ENSSMAG00000014977) ENSSMAG00000014995 camkvb (ENSSMAG00000015020) ENSSMAG00000015037 arl8bb (ENSSMAG00000036408) ENSSMAG00000022883 ENSSMAG00000015251 bhlhe40 (ENSSMAG00000026563) setmar (ENSSMAG00000015405) lrrn1 (ENSSMAG00000015413) ENSSMAG00000026170 trnt1 (ENSSMAG00000015432) arl6ip5a (ENSSMAG00000015475) FRMD4B (ENSSMAG00000015504) Tongue sole MODERN SPECIES 2 rybpa (ENSCSEG00000007805) ENSCSEG00000007818 shq1 (ENSCSEG00000007829) gxylt2 (ENSCSEG00000007848) ppp4r2b (ENSCSEG00000007869) pdzrn3b (ENSCSEG00000007883) ENSCSEG00000007911 ENSCSEG00000007957 ENSCSEG00000008067 cntn4 (ENSCSEG00000008117) arl6ip5a (ENSCSEG00000008154) trnt1 (ENSCSEG00000008157) ENSCSEG00000008178 ENSCSEG00000008213 mon1a (ENSCSEG00000008235) grm6b (ENSCSEG00000008243) ##22 ENSCSEG00000008263 SRPK3 (ENSCSEG00000008071) CKB (ENSCSEG00000008082) wnt4 (ENSCSEG00000008092) fbxo2 (ENSCSEG00000008134) svbp (ENSCSEG00000008141) ITGA5 (ENSCSEG00000008169) ENSCSEG00000008387 cdc42 (ENSCSEG00000008405) snrpe (ENSCSEG00000008431) sox13 (ENSCSEG00000008443) CHST15 (ENSCSEG00000008472) ENSCSEG00000008476 slc41a1 (ENSCSEG00000008494) ENSCSEG00000008511 Carangaria_A ANCESTRAL SPECIES 7 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Barramundi perch MODERN SPECIES 93 adnpa (ENSLCAG00010019391) BCL2L1 (ENSLCAG00010019389) gata1a (ENSLCAG00010019384) si:dkey-13a21.4 (ENSLCAG00010019380) opn1sw2 (ENSLCAG00010019363) opn1sw2 (ENSLCAG00010019332) opn1sw2 (ENSLCAG00010019314) opn1lw1 (ENSLCAG00010019185) gnl3l (ENSLCAG00010019117) tfe3b (ENSLCAG00010018845) cxxc1b (ENSLCAG00010018774) mbd1b (ENSLCAG00010018764) ccdc120b (ENSLCAG00010018757) SRPK3 (ENSLCAG00010018737) comtb (ENSLCAG00010018721) grm6b (ENSLCAG00010018700) ##22 traip (ENSLCAG00010018680) mon1a (ENSLCAG00010018669) ENSLCAG00010018663 camkvb (ENSLCAG00010018655) SEMA3F (ENSLCAG00010018634) arl8bb (ENSLCAG00010018615) NAAA (ENSLCAG00010018609) bhlhe40 (ENSLCAG00010018605) slc43a1a (ENSLCAG00010018575) med19a (ENSLCAG00010018564) si:dkey-6i22.5 (ENSLCAG00010018560) tmx2a (ENSLCAG00010018557) zdhhc5b (ENSLCAG00010018554) clp1 (ENSLCAG00010018551) ENSLCAG00010018548 Seriola ANCESTRAL SPECIES 10 ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Yellowtail amberjack MODERN SPECIES 2631 ENSSLDG00000009983 comtb (ENSSLDG00000009969) grm6b (ENSSLDG00000009921) ##22 traip (ENSSLDG00000009865) mon1a (ENSSLDG00000009834) MST1R (ENSSLDG00000009798) camkvb (ENSSLDG00000009673) SEMA3F (ENSSLDG00000009613) arl8bb (ENSSLDG00000009588) NAAA (ENSSLDG00000009564) bhlhe40 (ENSSLDG00000009545) ITPR1 (ENSSLDG00000009407) setmar (ENSSLDG00000009370) lrrn1 (ENSSLDG00000009364) ENSSLDG00000009355 trnt1 (ENSSLDG00000009325) arl6ip5a (ENSSLDG00000009316) FRMD4B (ENSSLDG00000009202) Greater amberjack MODERN SPECIES 37 BCL2L1 (ENSSDUG00000019783) gata1a (ENSSDUG00000019759) si:dkey-13a21.4 (ENSSDUG00000019738) hcfc1a (ENSSDUG00000019688) opn1sw2 (ENSSDUG00000017946) opn1sw2 (ENSSDUG00000017835) opn1sw2 (ENSSDUG00000015046) opn1lw1 (ENSSDUG00000013219) gnl3l (ENSSDUG00000013117) tfe3b (ENSSDUG00000013054) cxxc1b (ENSSDUG00000013022) mbd1b (ENSSDUG00000012996) ccdc120b (ENSSDUG00000012978) SRPK3 (ENSSDUG00000012949) comtb (ENSSDUG00000012936) grm6b (ENSSDUG00000012908) ##22 traip (ENSSDUG00000012887) mon1a (ENSSDUG00000012873) MST1R (ENSSDUG00000012803) camkvb (ENSSDUG00000012707) SEMA3F (ENSSDUG00000012565) ENSSDUG00000012547 arl8bb (ENSSDUG00000012529) NAAA (ENSSDUG00000012503) bhlhe40 (ENSSDUG00000012494) ITPR1 (ENSSDUG00000012375) setmar (ENSSDUG00000012353) lrrn1 (ENSSDUG00000012348) ENSSDUG00000012333 trnt1 (ENSSDUG00000012320) arl6ip5a (ENSSDUG00000012308) Anabantaria ANCESTRAL SPECIES ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a Zig-zag eel MODERN SPECIES 19 gata1a (ENSMAMG00000021092) si:dkey-13a21.4 (ENSMAMG00000021095) hcfc1a (ENSMAMG00000021100) opn1sw2 (ENSMAMG00000026245) opn1sw2 (ENSMAMG00000021134) ENSMAMG00000022442 ENSMAMG00000022455 gnl3l (ENSMAMG00000023332) tfe3b (ENSMAMG00000023336) ENSMAMG00000023337 cxxc1b (ENSMAMG00000023339) ENSMAMG00000027411 ccdc120b (ENSMAMG00000024568) ENSMAMG00000023345 comtb (ENSMAMG00000023349) grm6b (ENSMAMG00000023356) ##22 mon1a (ENSMAMG00000023358) traip (ENSMAMG00000023357) ENSMAMG00000023360 camkvb (ENSMAMG00000023367) ENSMAMG00000023374 arl8bb (ENSMAMG00000027917) ENSMAMG00000023382 ENSMAMG00000023384 bhlhe40 (ENSMAMG00000023386) ENSMAMG00000024536 ITPR1 (ENSMAMG00000023390) setmar (ENSMAMG00000023395) lrrn1 (ENSMAMG00000023397) ENSMAMG00000023400 trnt1 (ENSMAMG00000023401) Anabantoidei ANCESTRAL SPECIES 1 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000166196 ENSGT00940000164702.b ENSGT01030000234549.a.a.a.a.a.a.c.a.a ENSGT01030000234549.a.a.a.a.a.a.d ENSGT01030000234549.a.a.a.b ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392 ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a.n ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a Siamese fighting fish MODERN SPECIES 16 adnpa (ENSBSLG00000023899) BCL2L1 (ENSBSLG00000023910) gata1a (ENSBSLG00000023916) si:dkey-13a21.4 (ENSBSLG00000007864) hcfc1a (ENSBSLG00000007920) opn1sw2 (ENSBSLG00000008108) opn1sw2 (ENSBSLG00000008155) opn1lw1 (ENSBSLG00000008207) gnl3l (ENSBSLG00000008417) tfe3b (ENSBSLG00000008528) cxxc1b (ENSBSLG00000008835) mbd1b (ENSBSLG00000009328) ccdc120b (ENSBSLG00000009387) SRPK3 (ENSBSLG00000009779) comtb (ENSBSLG00000010327) grm6b (ENSBSLG00000010337) ##22 traip (ENSBSLG00000010544) mon1a (ENSBSLG00000010555) ENSBSLG00000010560 camkvb (ENSBSLG00000010678) SEMA3F (ENSBSLG00000010913) arl8bb (ENSBSLG00000013136) NAAA (ENSBSLG00000013286) bhlhe40 (ENSBSLG00000013372) ITPR1 (ENSBSLG00000013775) setmar (ENSBSLG00000020708) lrrn1 (ENSBSLG00000020709) ENSBSLG00000020712 trnt1 (ENSBSLG00000020713) arl6ip5a (ENSBSLG00000020715) FRMD4B (ENSBSLG00000020719) Climbing perch MODERN SPECIES 18 ENSATEG00000014989 gata1a (ENSATEG00000014966) si:dkey-13a21.4 (ENSATEG00000014958) hcfc1a (ENSATEG00000014798) opn1sw2 (ENSATEG00000014765) opn1sw2 (ENSATEG00000014431) ENSATEG00000011811 ENSATEG00000009817 gnl3l (ENSATEG00000009762) tfe3b (ENSATEG00000009661) cxxc1b (ENSATEG00000009642) mbd1b (ENSATEG00000009608) ccdc120b (ENSATEG00000009583) ENSATEG00000009561 comtb (ENSATEG00000009551) grm6b (ENSATEG00000009522) ##22 traip (ENSATEG00000009440) mon1a (ENSATEG00000009424) ENSATEG00000009407 camkvb (ENSATEG00000009278) ENSATEG00000009213 arl8bb (ENSATEG00000028465) ENSATEG00000009196 bhlhe40 (ENSATEG00000009176) ITPR1 (ENSATEG00000009014) setmar (ENSATEG00000008998) lrrn1 (ENSATEG00000008988) ENSATEG00000008955 trnt1 (ENSATEG00000008928) arl6ip5a (ENSATEG00000008916) FRMD4B (ENSATEG00000008872) Cod MODERN SPECIES 4 ENSGMOG00000025656 gata1a (ENSGMOG00000029187) si:dkey-13a21.4 (ENSGMOG00000024459) ENSGMOG00000018011 opn1sw2 (ENSGMOG00000018045) opn1sw2 (ENSGMOG00000018054) gnl3l (ENSGMOG00000018085) tfe3b (ENSGMOG00000018115) cxxc1b (ENSGMOG00000002734) ENSGMOG00000036759 ccdc120b (ENSGMOG00000029914) ENSGMOG00000002647 ENSGMOG00000011937 ENSGMOG00000020337 ENSGMOG00000002636 grm6b (ENSGMOG00000002607) ##22 traip (ENSGMOG00000002576) mon1a (ENSGMOG00000024519) ENSGMOG00000032890 camkvb (ENSGMOG00000002479) ENSGMOG00000002430 arl8bb (ENSGMOG00000002416) ENSGMOG00000002389 bhlhe40 (ENSGMOG00000031170) ITPR1 (ENSGMOG00000002239) setmar (ENSGMOG00000034115) LRRN1 (ENSGMOG00000020177) HRH1 (ENSGMOG00000034842) ATG7 (ENSGMOG00000010427) vgll4b (ENSGMOG00000010444) ENSGMOG00000010454 Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT00940000160486.d ENSGT00940000164411 ENSGT00530000063631.b.n.a ENSGT01090000260003.a.b.b.a.a.b.b.a.l ENSGT00940000166313.a ENSGT00940000161383.d.a ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a ENSGT00940000155877 ENSGT00940000157503.i.b ENSGT00940000166392.c ENSGT00950000183005.a.a ENSGT00940000154102.b.a.a ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##22 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a ENSGT01020000230354.A.a.a ENSGT00940000156326.a.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 103 ENSGT00940000164411.d ENSGT00530000063631.b.n.a.d ENSGT01090000260003.a.b.b.a.a.b.b.a.l.d ENSGT00940000166313.a.d ENSGT00940000161383.d.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.a ENSGT00940000155877 ENSGT00940000157503.i.b.d ENSGT00940000166392.c.a ENSGT00950000183005.a.a.d ENSGT00940000154102.b.a.a.d ENSGT00940000157877.b.h.g ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ##22 ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 ENSGT00390000008631.a.o.a.b ENSGT01020000230354.A.a.a.d ENSGT00940000156326.a.b.c Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000164411.d ENSGT00530000063631.b.n.a.d ENSGT01090000260003.a.b.b.a.a.b.b.a.l.d ENSGT00940000166313.a.d ENSGT00940000161383.d.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.a ENSGT00940000155877 ENSGT00940000157503.i.b.d ENSGT00940000166392.c.a ENSGT00950000183005.a.a.d ENSGT00940000154102.b.a.a.d ENSGT00940000157877.b.h.g ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ##22 ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 ENSGT00390000008631.a.o.a.b ENSGT01020000230354.A.a.a.d ENSGT00940000156326.a.b.c Salmo ANCESTRAL SPECIES 33 ENSGT00940000164411.d ENSGT00530000063631.b.n.a.d ENSGT01090000260003.a.b.b.a.a.b.b.a.l.d ENSGT00940000166313.a.d ENSGT00940000161383.d.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.a ENSGT00940000155877 ENSGT00940000157503.i.b.d ENSGT00730000111044 ENSGT00950000183005.a.a.d ENSGT00940000154102.b.a.a.d ENSGT00940000157877.b.h.g ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ##22 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.e ENSGT00390000008631.a.o.a.b ENSGT01020000230354.A.a.a.d ENSGT00940000156326.a.b.c ENSGT00940000165309.e.a River trout MODERN SPECIES 5 adnpa (ENSSTUG00000017712) BCL2L1 (ENSSTUG00000017701) gata1a (ENSSTUG00000017690) HCFC1 (ENSSTUG00000017458) opn1sw2 (ENSSTUG00000017425) ENSSTUG00000017235 ENSSTUG00000017145 gnl3l (ENSSTUG00000017058) tfe3b (ENSSTUG00000017011) CXXC1 (ENSSTUG00000016765) mbd1b (ENSSTUG00000016736) ENSSTUG00000016732 ccdc120b (ENSSTUG00000016723) SRPK3 (ENSSTUG00000016695) comtb (ENSSTUG00000016606) grm6b (ENSSTUG00000016561) ##22 traip (ENSSTUG00000016538) mon1a (ENSSTUG00000016521) ENSSTUG00000016484 camkvb (ENSSTUG00000016452) SEMA3F (ENSSTUG00000015849) arl8bb (ENSSTUG00000015812) bhlhe40 (ENSSTUG00000015789) ITPR1 (ENSSTUG00000015338) setmar (ENSSTUG00000015300) lrrn1 (ENSSTUG00000015297) ENSSTUG00000015291 trnt1 (ENSSTUG00000015279) arl6ip5a (ENSSTUG00000015266) FRMD4B (ENSSTUG00000015084) mitfa (ENSSTUG00000014914) Atlantic salmon MODERN SPECIES 3 gata1a (ENSSSAG00000008520) ENSSSAG00000089688 ENSSSAG00000008592 opn1sw2 (ENSSSAG00000104363) ENSSSAG00000010443 ENSSSAG00000114717 gnl3l (ENSSSAG00000015523) ENSSSAG00000118599 tfe3b (ENSSSAG00000015673) ENSSSAG00000020016 ENSSSAG00000092788 mbd1b (ENSSSAG00000035232) ccdc120b (ENSSSAG00000035547) ENSSSAG00000036227 comtb (ENSSSAG00000042490) grm6b (ENSSSAG00000093082) ##22 mon1a (ENSSSAG00000043049) ENSSSAG00000043080 camkvb (ENSSSAG00000043153) ENSSSAG00000043762 arl8bb (ENSSSAG00000116454) BHLH2 (ENSSSAG00000052801) ITPR1 (ENSSSAG00000054019) ENSSSAG00000112671 setmar (ENSSSAG00000077574) lrrn1 (ENSSSAG00000098200) ENSSSAG00000077580 TRNT1 (ENSSSAG00000077584) arl6ip5a (ENSSSAG00000077595) FRMD4B (ENSSSAG00000077601) mitfa (ENSSSAG00000077659) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000160486.d.b ENSGT00940000164411.d ENSGT00530000063631.b.n.a.d ENSGT01090000260003.a.b.b.a.a.b.b.a.l.d ENSGT00940000166313.a.d ENSGT00940000161383.d.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.a ENSGT00940000155877 ENSGT00940000157503.i.b.d ENSGT00940000166392.c.a ENSGT00950000183005.a.a.d ENSGT00940000154102.b.a.a.d ENSGT00940000157877.b.h.g ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ##22 ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h ENSGT00390000008631.a.o.a.b ENSGT01020000230354.A.a.a.d ENSGT00940000156326.a.b.c Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000160486.d.b ENSGT00940000164411.d ENSGT00530000063631.b.n.a.d ENSGT01090000260003.a.b.b.a.a.b.b.a.l.d ENSGT00940000166313.a.d ENSGT00940000161383.d.a.b ENSGT01030000234549.a.a.a.a.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.a ENSGT00940000155877 ENSGT00940000157503.i.b.d ENSGT00940000166392.c.a ENSGT00950000183005.a.a.d ENSGT00940000154102.b.a.a.d ENSGT00940000157877.b.h.g ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ##22 ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h ENSGT00390000008631.a.o.a.b ENSGT01020000230354.A.a.a.d ENSGT00940000156326.a.b.c Chinook salmon MODERN SPECIES 11 MAFB (ENSOTSG00005043144) ENSOTSG00005043145 adnpa (ENSOTSG00005043146) BCL2L1 (ENSOTSG00005043147) gata1a (ENSOTSG00005043148) HCFC1 (ENSOTSG00005043149) opn1sw2 (ENSOTSG00005043152) ENSOTSG00005043155 gnl3l (ENSOTSG00005043179) tfe3b (ENSOTSG00005043372) cxxc1b (ENSOTSG00005043374) mbd1b (ENSOTSG00005043437) ccdc120b (ENSOTSG00005043438) SRPK3 (ENSOTSG00005043456) comtb (ENSOTSG00005045196) grm6b (ENSOTSG00005045198) ##22 ENSOTSG00005045212 mon1a (ENSOTSG00005045213) MST1R (ENSOTSG00005045214) camkvb (ENSOTSG00005000406) SEMA3F (ENSOTSG00005000749) arl8bb (ENSOTSG00005001141) bhlhe40 (ENSOTSG00005001151) ITPR1 (ENSOTSG00005001228) setmar (ENSOTSG00005001878) lrrn1 (ENSOTSG00005001879) ENSOTSG00005001880 trnt1 (ENSOTSG00005001883) arl6ip5a (ENSOTSG00005001888) FRMD4B (ENSOTSG00005001893) mitfa (ENSOTSG00005001922) Coho salmon MODERN SPECIES MAFB (ENSOKIG00005014519) adnpa (ENSOKIG00005014512) BCL2L1 (ENSOKIG00005014496) gata1a (ENSOKIG00005014483) HCFC1 (ENSOKIG00005014244) ENSOKIG00005014220 opn1sw2 (ENSOKIG00005014210) ENSOKIG00005014066 gnl3l (ENSOKIG00005013946) tfe3b (ENSOKIG00005013920) cxxc1b (ENSOKIG00005013660) mbd1b (ENSOKIG00005013620) ccdc120b (ENSOKIG00005013610) SRPK3 (ENSOKIG00005013561) comtb (ENSOKIG00005013536) grm6b (ENSOKIG00005013474) ##22 ENSOKIG00005013355 mon1a (ENSOKIG00005013313) MST1R (ENSOKIG00005013256) ENSOKIG00005013248 ENSOKIG00005013243 camkvb (ENSOKIG00005013204) SEMA3F (ENSOKIG00005013005) arl8bb (ENSOKIG00005012969) bhlhe40 (ENSOKIG00005012956) ITPR1 (ENSOKIG00005012584) setmar (ENSOKIG00005012520) lrrn1 (ENSOKIG00005012515) ENSOKIG00005012512 trnt1 (ENSOKIG00005012500) arl6ip5a (ENSOKIG00005012491) Rainbow trout MODERN SPECIES 8 adnpa (ENSOMYG00000017914) ENSOMYG00000017923 gata1a (ENSOMYG00000017940) ENSOMYG00000066542 ENSOMYG00000018008 ENSOMYG00000019621 opn1sw2 (ENSOMYG00000019627) ENSOMYG00000019730 gnl3l (ENSOMYG00000019850) tfe3b (ENSOMYG00000020367) cxxc1b (ENSOMYG00000020532) mbd1b (ENSOMYG00000020593) ccdc120b (ENSOMYG00000020609) ENSOMYG00000020776 comtb (ENSOMYG00000021878) grm6b (ENSOMYG00000021991) ##22 ENSOMYG00000075273 mon1a (ENSOMYG00000022263) ENSOMYG00000022319 camkvb (ENSOMYG00000022384) ENSOMYG00000022540 arl8bb (ENSOMYG00000022701) bhlhe40 (ENSOMYG00000022729) ITPR1 (ENSOMYG00000023613) ENSOMYG00000024717 setmar (ENSOMYG00000024725) lrrn1 (ENSOMYG00000024735) ENSOMYG00000024756 trnt1 (ENSOMYG00000024790) arl6ip5a (ENSOMYG00000024815) FRMD4B (ENSOMYG00000025031) Huchen MODERN SPECIES 42 ENSHHUG00000000011 adnpa (ENSHHUG00000000079) BCL2L1 (ENSHHUG00000000089) gata1a (ENSHHUG00000000102) HCFC1 (ENSHHUG00000000123) opn1sw2 (ENSHHUG00000000400) ENSHHUG00000000425 ENSHHUG00000000749 gnl3l (ENSHHUG00000001091) tfe3b (ENSHHUG00000001218) cxxc1b (ENSHHUG00000001362) mbd1b (ENSHHUG00000001603) ccdc120b (ENSHHUG00000001636) SRPK3 (ENSHHUG00000001646) comtb (ENSHHUG00000002247) grm6b (ENSHHUG00000002259) ##22 ENSHHUG00000002603 mon1a (ENSHHUG00000002609) ENSHHUG00000002620 ENSHHUG00000002638 camkvb (ENSHHUG00000002647) SEMA3F (ENSHHUG00000002663) Salmoninae ANCESTRAL SPECIES 8 ENSGT00940000158405.g ENSGT00940000160486.d.a ENSGT00940000164411.c ENSGT00530000063631.b.n.a.c ENSGT01090000260003.a.b.b.a.a.b.b.a.l.c ENSGT00940000166313.a.c ENSGT00940000161383.d.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.b ENSGT00940000157503.i.b.c ENSGT00940000166392.c.b ENSGT00730000111044 ENSGT00950000183005.a.a.c ENSGT00940000154102.b.a.a.c ENSGT00940000157877.b.h.h ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ##22 ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a ENSGT01020000230354.A.a.a.c ENSGT00940000156326.a.b.d ENSGT00940000165309.e.b Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000158405.g ENSGT00940000160486.d.a ENSGT00940000164411.c ENSGT00530000063631.b.n.a.c ENSGT01090000260003.a.b.b.a.a.b.b.a.l.c ENSGT00940000166313.a.c ENSGT00940000161383.d.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.b ENSGT00940000157503.i.b.c ENSGT00940000166392.c.b ENSGT00730000111044 ENSGT00950000183005.a.a.c ENSGT00940000154102.b.a.a.c ENSGT00940000157877.b.h.h ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ##22 ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a ENSGT01020000230354.A.a.a.c ENSGT00940000156326.a.b.d ENSGT00940000165309.e.b Salmo ANCESTRAL SPECIES 6 ENSGT00950000182893.a.a.b.b.f ENSGT00940000158405.g ENSGT00940000160486.d.a ENSGT00940000164411.c ENSGT00530000063631.b.n.a.c ENSGT01090000260003.a.b.b.a.a.b.b.a.l.c ENSGT00940000166313.a.c ENSGT00940000161383.d.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.b ENSGT00940000157503.i.b.c ENSGT00940000166392.c.b ENSGT00950000183005.a.a.c ENSGT00940000154102.b.a.a.c ENSGT00940000157877.b.h.h ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ##22 ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000009678.f ENSGT00390000008631.a.o.a.a ENSGT01020000230354.A.a.a.c ENSGT00940000156326.a.b.d Atlantic salmon MODERN SPECIES 14 ENSSSAG00000081397 fam83d (ENSSSAG00000081395) ENSSSAG00000113089 ENSSSAG00000081390 adnpa (ENSSSAG00000081389) gata1a (ENSSSAG00000081386) ENSSSAG00000081388 ENSSSAG00000081355 ENSSSAG00000081346 tfe3b (ENSSSAG00000081340) cxxc1b (ENSSSAG00000081321) mbd1b (ENSSSAG00000081317) ccdc120b (ENSSSAG00000107262) ENSSSAG00000081305 comtb (ENSSSAG00000095832) grm6b (ENSSSAG00000105405) ##22 traip (ENSSSAG00000051195) mon1a (ENSSSAG00000081282) ENSSSAG00000081275 ENSSSAG00000117917 ENSSSAG00000081274 camkvb (ENSSSAG00000095316) ENSSSAG00000081205 BHLH2 (ENSSSAG00000081153) ENSSSAG00000078769 setmar (ENSSSAG00000078434) lrrn1 (ENSSSAG00000085844) ENSSSAG00000078424 ENSSSAG00000087334 trnt1 (ENSSSAG00000078413) arl6ip5a (ENSSSAG00000098089) River trout MODERN SPECIES 7 ENSSTUG00000033889 top1a (ENSSTUG00000033912) ENSSTUG00000034597 fam83d (ENSSTUG00000034601) ENSSTUG00000034608 adnpa (ENSSTUG00000034635) BCL2L1 (ENSSTUG00000034657) gata1a (ENSSTUG00000034673) HCFC1 (ENSSTUG00000034680) ENSSTUG00000034912 tfe3b (ENSSTUG00000034951) cxxc1b (ENSSTUG00000035005) mbd1b (ENSSTUG00000035673) ccdc120b (ENSSTUG00000035764) comtb (ENSSTUG00000035786) grm6b (ENSSTUG00000035821) ##22 traip (ENSSTUG00000035875) mon1a (ENSSTUG00000035963) ENSSTUG00000035987 ENSSTUG00000036057 camkvb (ENSSTUG00000036070) SEMA3F (ENSSTUG00000036160) bhlhe40 (ENSSTUG00000037370) ITPR1 (ENSSTUG00000034046) setmar (ENSSTUG00000034728) ENSSTUG00000034740 lrrn1 (ENSSTUG00000034747) ENSSTUG00000034758 ENSSTUG00000034824 arl6ip5a (ENSSTUG00000034827) FRMD4B (ENSSTUG00000034835) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000164411.c ENSGT00530000063631.b.n.a.c ENSGT01090000260003.a.b.b.a.a.b.b.a.l.c ENSGT00940000166313.a.c ENSGT00940000161383.d.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.b ENSGT00940000157503.i.b.c ENSGT00940000166392.c.b ENSGT00940000164755.A ENSGT00940000159667.a.f ENSGT00730000111044 ENSGT00950000183005.a.a.c ENSGT00940000154102.b.a.a.c ENSGT00940000157877.b.h.h ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ##22 ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a ENSGT01020000230354.A.a.a.c ENSGT00940000156326.a.b.d ENSGT00940000165309.e.b Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000158405.g ENSGT00940000160486.d.a ENSGT00940000164411.c ENSGT00530000063631.b.n.a.c ENSGT01090000260003.a.b.b.a.a.b.b.a.l.c ENSGT00940000166313.a.c ENSGT00940000161383.d.a.a ENSGT01030000234549.a.a.a.b.cb.a.b.b ENSGT00940000157503.i.b.c ENSGT00940000166392.c.b ENSGT00730000111044 ENSGT00950000183005.a.a.c ENSGT00940000154102.b.a.a.c ENSGT00940000157877.b.h.h ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ##22 ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000175393 ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a ENSGT01020000230354.A.a.a.c ENSGT00940000156326.a.b.d Chinook salmon MODERN SPECIES 31 ENSOTSG00005026354 fam83d (ENSOTSG00005026353) MAFB (ENSOTSG00005026352) ENSOTSG00005026351 adnpa (ENSOTSG00005026350) BCL2L1 (ENSOTSG00005026349) gata1a (ENSOTSG00005026348) HCFC1 (ENSOTSG00005025435) ENSOTSG00005030472 tfe3b (ENSOTSG00005030461) cxxc1b (ENSOTSG00005030449) mbd1b (ENSOTSG00005030447) ccdc120b (ENSOTSG00005030445) SRPK3 (ENSOTSG00005030443) comtb (ENSOTSG00005030442) grm6b (ENSOTSG00005030440) ##22 traip (ENSOTSG00005030396) mon1a (ENSOTSG00005030356) MST1R (ENSOTSG00005030351) ENSOTSG00005030348 ENSOTSG00005030346 camkvb (ENSOTSG00005030318) SEMA3F (ENSOTSG00005029841) bhlhe40 (ENSOTSG00005029834) ITPR1 (ENSOTSG00005029499) setmar (ENSOTSG00005029489) lrrn1 (ENSOTSG00005029488) ENSOTSG00005029487 ENSOTSG00005029486 arl6ip5a (ENSOTSG00005029485) FRMD4B (ENSOTSG00005029474) Coho salmon MODERN SPECIES 25 ENSOKIG00005001012 fam83d (ENSOKIG00005001007) MAFB (ENSOKIG00005001002) ENSOKIG00005000996 adnpa (ENSOKIG00005000989) BCL2L1 (ENSOKIG00005000981) gata1a (ENSOKIG00005000975) HCFC1 (ENSOKIG00005000945) ENSOKIG00005000917 tfe3b (ENSOKIG00005000908) CXXC1 (ENSOKIG00005000830) mbd1b (ENSOKIG00005000756) ccdc120b (ENSOKIG00005000738) SRPK3 (ENSOKIG00005000728) comtb (ENSOKIG00005000717) grm6b (ENSOKIG00005000710) ##22 traip (ENSOKIG00005000674) mon1a (ENSOKIG00005000633) ENSOKIG00005000620 ENSOKIG00005000607 ENSOKIG00005000597 ENSOKIG00005000585 camkvb (ENSOKIG00005000557) SEMA3F (ENSOKIG00005000482) bhlhe40 (ENSOKIG00005000439) ITPR1 (ENSOKIG00005000297) lrrn1 (ENSOKIG00005000048) ENSOKIG00005000039 ENSOKIG00005000022 arl6ip5a (ENSOKIG00005000004) FRMD4B (ENSOKIG00005049789) Rainbow trout MODERN SPECIES 28 ENSOMYG00000022642 adnpa (ENSOMYG00000022627) ENSOMYG00000022616 ENSOMYG00000053348 gata1a (ENSOMYG00000022604) ENSOMYG00000022484 ENSOMYG00000073696 ENSOMYG00000022325 tfe3b (ENSOMYG00000022308) ENSOMYG00000021738 mbd1b (ENSOMYG00000021578) ENSOMYG00000064320 ccdc120b (ENSOMYG00000021563) ENSOMYG00000021549 comtb (ENSOMYG00000021507) grm6b (ENSOMYG00000021486) ##22 traip (ENSOMYG00000021463) mon1a (ENSOMYG00000021436) MST1R (ENSOMYG00000021410) ENSOMYG00000021362 ENSOMYG00000073574 camkvb (ENSOMYG00000021343) ENSOMYG00000019619 bhlhe40 (ENSOMYG00000019293) ENSOMYG00000019279 ENSOMYG00000018924 ENSOMYG00000058313 setmar (ENSOMYG00000018797) lrrn1 (ENSOMYG00000018787) ENSOMYG00000018779 praf3 (ENSOMYG00000018762) Huchen MODERN SPECIES 2095 ENSHHUG00000019149 ENSHHUG00000019136 adnpa (ENSHHUG00000019123) BCL2L1 (ENSHHUG00000019112) gata1a (ENSHHUG00000019104) HCFC1 (ENSHHUG00000019091) ENSHHUG00000019084 ENSHHUG00000018987 tfe3b (ENSHHUG00000018985) cxxc1b (ENSHHUG00000018861) mbd1b (ENSHHUG00000018835) ccdc120b (ENSHHUG00000018833) ENSHHUG00000018832 SRPK3 (ENSHHUG00000018790) comtb (ENSHHUG00000018775) grm6b (ENSHHUG00000018125) ##22 traip (ENSHHUG00000018113) mon1a (ENSHHUG00000018109) ENSHHUG00000018068 Northern pike MODERN SPECIES 16 fam83d (ENSELUG00000004726) MAFB (ENSELUG00000004717) ENSELUG00000004696 adnpa (ENSELUG00000004665) BCL2L1 (ENSELUG00000004651) gata1a (ENSELUG00000004641) hcfc1a (ENSELUG00000004626) ENSELUG00000004583 gnl3l (ENSELUG00000004555) tfe3b (ENSELUG00000004498) cxxc1b (ENSELUG00000004423) mbd1b (ENSELUG00000004375) ccdc120b (ENSELUG00000004322) SRPK3 (ENSELUG00000001310) comtb (ENSELUG00000004237) grm6b (ENSELUG00000004228) ##22 ENSELUG00000004204 mon1a (ENSELUG00000004180) ENSELUG00000004158 ENSELUG00000033830 ENSELUG00000004107 camkvb (ENSELUG00000004070) SEMA3F (ENSELUG00000004030) arl8bb (ENSELUG00000003984) bhlhe40 (ENSELUG00000001165) ITPR1 (ENSELUG00000003888) setmar (ENSELUG00000003826) lrrn1 (ENSELUG00000003813) ENSELUG00000028972 trnt1 (ENSELUG00000003802) praf3 (ENSELUG00000003790) Actinopterygii ANCESTRAL SPECIES 136 ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 Neopterygii ANCESTRAL SPECIES 131 ENSGT01030000234549.a.a.a.a.a.a ENSGT00530000063687.b.b.b ENSGT00940000160502 ENSGT00940000161383 ENSGT00940000166196 ENSGT00940000159128 ENSGT00940000166313 ENSGT00940000159563 ENSGT00990000203541.b ENSGT00600000085663 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.a.a ##22 ENSGT00390000012692 ENSGT00940000156963.a.b ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.b ##22 ENSGT00940000160485 ENSGT00390000005780.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000165528 ENSGT00940000158963 ENSGT00940000161689 ENSGT00950000182827.B ENSGT00390000011863.c ENSGT00940000155869 ENSGT00940000162187 ENSGT01050000244850.A.a Spotted gar MODERN SPECIES 647 FAM107A (ENSLOCG00000014487) renbp (ENSLOCG00000014488) ENSLOCG00000014494 ptpn18 (ENSLOCG00000014499) MON1B (ENSLOCG00000014503) gripap1 (ENSLOCG00000014510) kcnd1 (ENSLOCG00000014523) ENSLOCG00000014533 ENSLOCG00000014538 alas2 (ENSLOCG00000014541) fam50a (ENSLOCG00000014548) ENSLOCG00000014554 ENSLOCG00000014555 comtb (ENSLOCG00000014559) abt1 (ENSLOCG00000014561) grm6a (ENSLOCG00000014563) ##22 ENSLOCG00000014568 zgc:86609 (ENSLOCG00000014569) uxt (ENSLOCG00000014570) ELK1 (ENSLOCG00000014572) ENSLOCG00000017978 otud5a (ENSLOCG00000014573) pim2 (ENSLOCG00000014577) slc35a2 (ENSLOCG00000014583) bcap31 (ENSLOCG00000014585) slc6a8 (ENSLOCG00000014590) PNCK (ENSLOCG00000014603) plxna3 (ENSLOCG00000014612) idh3g (ENSLOCG00000014632) ENSLOCG00000014638 ENSLOCG00000014641 Reedfish MODERN SPECIES 2 mecp2 (ENSECRG00000007685) IRAK1 (ENSECRG00000007760) ENSECRG00000007782 TMEM187 (ENSECRG00000007796) HCFC1 (ENSECRG00000007822) si:dkey-13a21.4 (ENSECRG00000007855) cdk20 (ENSECRG00000007865) gata1a (ENSECRG00000007886) ENSECRG00000007908 ENSECRG00000007966 tsr2 (ENSECRG00000008057) CDK16 (ENSECRG00000008102) comtb (ENSECRG00000008178) abt1 (ENSECRG00000008206) ENSECRG00000008237 ##22 ENSECRG00000008328 ##22 ENSECRG00000008668 zgc:86609 (ENSECRG00000008697) uxt (ENSECRG00000008724) ENSECRG00000008741 ENSECRG00000008752 otud5a (ENSECRG00000008757) pim2 (ENSECRG00000008775) pim2 (ENSECRG00000008783) slc35a2 (ENSECRG00000008796) bcap31 (ENSECRG00000008809) slc6a8 (ENSECRG00000008845) ENSECRG00000008903 ENSECRG00000008931 ENSECRG00000008948 smc1al (ENSECRG00000008973) Sarcopterygii ANCESTRAL SPECIES 405 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00950000182827.B ENSGT00940000161689 ENSGT00940000158963 ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000012692 Tetrapoda ANCESTRAL SPECIES 235 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00950000182827.B ENSGT00940000161689 ENSGT00940000158963 ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 Amniota ANCESTRAL SPECIES 65 ENSGT00940000156963.a.b ENSGT00940000158975 ENSGT00940000165541 ENSGT00390000003022 ENSGT00940000160369 ENSGT00390000016016.B ENSGT00390000012929 ENSGT00940000153231.A ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 Sauria ANCESTRAL SPECIES 56 ENSGT00390000005780.a ENSGT00940000160485 ENSGT00940000156963.a.b ENSGT00940000158975 ENSGT00940000165541 ENSGT00390000003022 ENSGT00940000160369 ENSGT00390000016016.B ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 Lepidosauria ANCESTRAL SPECIES 38 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Episquamata ANCESTRAL SPECIES 23 ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000165391 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Laterata ANCESTRAL SPECIES 7 ENSGT00940000153683.a.a ENSGT00940000162852.b.a.a.b.b.a ENSGT00940000162852.b.a.a.b.a.d ENSGT00940000153683.a.b ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Common wall lizard MODERN SPECIES 8 OR1F1 (ENSPMRG00000018485) ENSPMRG00000018491 ENSPMRG00000018495 ENSPMRG00000018499 ENSPMRG00000018507 ENSPMRG00000018519 ENSPMRG00000018521 SPACA3 (ENSPMRG00000018537) ENSPMRG00000018568 ENSPMRG00000018574 ENSPMRG00000018579 ENSPMRG00000018585 ENSPMRG00000018587 ENSPMRG00000018593 ABT1 (ENSPMRG00000018603) GRM6 (ENSPMRG00000018607) ##22 ENSPMRG00000018623 WDR13 (ENSPMRG00000018635) SUV39H1 (ENSPMRG00000018649) WAS (ENSPMRG00000018659) ##29 ENSPMRG00000018667 SLC38A5 (ENSPMRG00000018673) ENSPMRG00000018683 ENSPMRG00000018690 EBP (ENSPMRG00000018698) PORCN (ENSPMRG00000018707) ENSPMRG00000018717 FTSJ1 (ENSPMRG00000018723) GPKOW (ENSPMRG00000018732) WDR45 (ENSPMRG00000018757) PRAF2 (ENSPMRG00000018857) Argentine black and white tegu MODERN SPECIES 12 COL5A2 (ENSSMRG00000019394) ENSSMRG00000019391 ENSSMRG00000019390 ENSSMRG00000019389 ENSSMRG00000019388 ENSSMRG00000019387 ENSSMRG00000019386 ENSSMRG00000019385 ENSSMRG00000019384 ENSSMRG00000019383 ENSSMRG00000019381 ENSSMRG00000019380 RBM3 (ENSSMRG00000019379) ENSSMRG00000019378 ABT1 (ENSSMRG00000019377) GRM6 (ENSSMRG00000019270) ##22 ENSSMRG00000019264 WDR13 (ENSSMRG00000019261) SUV39H1 (ENSSMRG00000019258) SLC38A5 (ENSSMRG00000019251) TBC1D25 (ENSSMRG00000019248) EBP (ENSSMRG00000019246) PORCN (ENSSMRG00000019245) ENSSMRG00000019244 FTSJ1 (ENSSMRG00000019243) GPKOW (ENSSMRG00000019242) WDR45 (ENSSMRG00000019241) PRAF2 (ENSSMRG00000019240) CCDC120 (ENSSMRG00000019239) TFE3 (ENSSMRG00000019237) GRIPAP1 (ENSSMRG00000019236) Toxicofera ANCESTRAL SPECIES 6 ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000165391 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Elapidae ANCESTRAL SPECIES 21 ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000161810.a.b ENSGT00940000165391 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a.s ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a.t ENSGT00940000166825 ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Indian cobra MODERN SPECIES 1 OR1B1 (ENSNNAG00000007490) ENSNNAG00000007496 ENSNNAG00000007505 ENSNNAG00000007519 ENSNNAG00000007534 ENSNNAG00000007556 OR1N2 (ENSNNAG00000007596) ENSNNAG00000007634 ENSNNAG00000007772 ENSNNAG00000008382 ENSNNAG00000008413 ENSNNAG00000008430 RBM3 (ENSNNAG00000008459) ENSNNAG00000008480 ABT1 (ENSNNAG00000008508) GRM6 (ENSNNAG00000008590) ##22 WDR13 (ENSNNAG00000009312) SUV39H1 (ENSNNAG00000009353) WAS (ENSNNAG00000009371) ##29 SLC38A5 (ENSNNAG00000009453) TBC1D25 (ENSNNAG00000010438) ENSNNAG00000010495 PORCN (ENSNNAG00000010535) ENSNNAG00000010633 ENSNNAG00000010677 FTSJ1 (ENSNNAG00000010700) GPKOW (ENSNNAG00000010730) WDR45 (ENSNNAG00000010759) PRAF2 (ENSNNAG00000010800) CCDC120 (ENSNNAG00000010874) TFE3 (ENSNNAG00000010930) Elapidae_a ANCESTRAL SPECIES 23 ENSGT00940000159633 ENSGT00940000162852.b.b ENSGT00940000153683.a.a ENSGT00940000162852.b.a.a.b.b.a ENSGT00940000162852.b.a.a.b.a.f ENSGT00940000162852.b.a.a.b.a.e ENSGT00940000153683.a.b ENSGT00940000163103 ENSGT00940000161810.a.a ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000161810.a.b ENSGT00940000165391 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a.s ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a.t ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 Blue-lipped sea krait MODERN SPECIES 6996 GRM6 (ENSLLTG00000014239) ##22 Acanthophiinae ANCESTRAL SPECIES 23 ENSGT00940000161978.c ENSGT00940000159633 ENSGT00940000162852.b.b ENSGT00940000162852.b.a.a.b.b.a ENSGT00940000162852.b.a.a.b.a.f ENSGT00940000162852.b.a.a.b.a.e ENSGT00940000153683.a.b ENSGT00940000163103 ENSGT00940000161810.a.a ENSGT00950000184155.a.b ENSGT00940000159227 ENSGT00940000161810.a.b ENSGT00940000165391 ENSGT00940000153524.b.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a.s ENSGT01030000234564.a.a.b.a ENSGT00530000063715.a.t ENSGT00730000111146 ENSGT00390000015154 ENSGT00940000155657 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT00720000108868 Eastern brown snake MODERN SPECIES 52 ENSPTXG00000008962 ARAF (ENSPTXG00000008961) ENSPTXG00000008959 ENSPTXG00000008958 ENSPTXG00000008956 ENSPTXG00000008955 OR1N2 (ENSPTXG00000008954) ENSPTXG00000008953 ENSPTXG00000008499 ENSPTXG00000008498 ENSPTXG00000008497 ENSPTXG00000008496 RBM3 (ENSPTXG00000008495) ENSPTXG00000008494 ABT1 (ENSPTXG00000008493) GRM6 (ENSPTXG00000008284) ##22 WDR13 (ENSPTXG00000008274) SUV39H1 (ENSPTXG00000008273) WAS (ENSPTXG00000008271) ##29 SLC38A5 (ENSPTXG00000008266) TBC1D25 (ENSPTXG00000008263) ENSPTXG00000008261 PORCN (ENSPTXG00000008260) ENSPTXG00000008259 ENSPTXG00000008258 FTSJ1 (ENSPTXG00000008257) GPKOW (ENSPTXG00000008255) WDR45 (ENSPTXG00000008253) PRAF2 (ENSPTXG00000008251) CCDC120 (ENSPTXG00000008213) TFE3 (ENSPTXG00000008211) Mainland tiger snake MODERN SPECIES 81 ENSNSUG00000001209 ENSNSUG00000001208 ENSNSUG00000001203 ENSNSUG00000001192 ENSNSUG00000001188 ENSNSUG00000001181 OR1K1 (ENSNSUG00000001179) SPACA3 (ENSNSUG00000001171) ENSNSUG00000001080 ENSNSUG00000001078 ENSNSUG00000001075 ENSNSUG00000001072 RBM3 (ENSNSUG00000001070) ENSNSUG00000001066 ABT1 (ENSNSUG00000001065) GRM6 (ENSNSUG00000000257) ##22 WDR13 (ENSNSUG00000000218) SUV39H1 (ENSNSUG00000000131) WAS (ENSNSUG00000000092) ##29 SLC38A5 (ENSNSUG00000000035) TBC1D25 (ENSNSUG00000000006) ENSNSUG00000019865 PORCN (ENSNSUG00000019834) ENSNSUG00000019833 FTSJ1 (ENSNSUG00000019832) GPKOW (ENSNSUG00000019831) WDR45 (ENSNSUG00000019830) PRAF2 (ENSNSUG00000019829) CCDC120 (ENSNSUG00000019828) TFE3 (ENSNSUG00000019827) GRIPAP1 (ENSNSUG00000019826) Lizard MODERN SPECIES 1 ENSACAG00000007510 ENSACAG00000007259 ENSACAG00000024787 ENSACAG00000007128 CSAD (ENSACAG00000007021) ZNF740 (ENSACAG00000006993) ITGB7 (ENSACAG00000006931) RARG (ENSACAG00000006832) ENSACAG00000006796 ENSACAG00000006765 ENSACAG00000044779 MFSD5 (ENSACAG00000006761) ENSACAG00000006758 ESPL1 (ENSACAG00000006650) ENSACAG00000006636 ENSACAG00000006406 ##22 ENSACAG00000006403 ENSACAG00000036004 ENSACAG00000006342 ENSACAG00000006321 WAS (ENSACAG00000006303) ##29 ENSACAG00000006254 ENSACAG00000006227 ENSACAG00000044448 ENSACAG00000025194 ENSACAG00000006169 ENSACAG00000006125 ENSACAG00000036991 ENSACAG00000041420 ENSACAG00000006087 ENSACAG00000006080 Archelosauria ANCESTRAL SPECIES 68 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 Archosauria ANCESTRAL SPECIES 70 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000164454 ENSGT00950000182835.c.c ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000159855 Aves ANCESTRAL SPECIES 66 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000164454 ENSGT00950000182835.c.c ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000159855 Neognathae ANCESTRAL SPECIES 48 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00940000157847 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000164454 ENSGT00950000182835.c.c ENSGT00940000155170 ENSGT00550000074803 ENSGT00390000016224.j.a ENSGT00940000162821 ENSGT00940000161807 ENSGT00390000003809 ENSGT00940000159855 Neognathae_b ANCESTRAL SPECIES 66 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Passeriformes ANCESTRAL SPECIES 83 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Passeriformes_d ANCESTRAL SPECIES 79 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Passeriformes_g ANCESTRAL SPECIES 90 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Passeroidea ANCESTRAL SPECIES 95 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 38 ENSTGUG00000019568 ENSTGUG00000020951 ENSTGUG00000022796 ##22 ENSTGUG00000022259 ENSTGUG00000027775 ENSTGUG00000019736 ENSTGUG00000027947 ENSTGUG00000029102 UBA1 (ENSTGUG00000020872) ENSTGUG00000025459 IMP4 (ENSTGUG00000027791) ENSTGUG00000023635 ENSTGUG00000028522 ENSTGUG00000021493 ENSTGUG00000019503 ENSTGUG00000025094 ##22 ENSTGUG00000027009 TSR2 (ENSTGUG00000025955) ENSTGUG00000002777 PHF8 (ENSTGUG00000029424) ENSTGUG00000021153 ENSTGUG00000019111 SART1 (ENSTGUG00000025224) EIF1AD (ENSTGUG00000029092) SF3B2 (ENSTGUG00000029190) ENSTGUG00000021979 ENSTGUG00000016784 ENSTGUG00000016786 ENSTGUG00000029054 ENSTGUG00000021574 ENSTGUG00000024180 Zebra finch MODERN SPECIES 38 TSR2 (ENSTGUG00000025955) ENSTGUG00000027009 ENSTGUG00000025094 ##22 ENSTGUG00000019503 ENSTGUG00000021493 ENSTGUG00000028522 ENSTGUG00000023635 IMP4 (ENSTGUG00000027791) ENSTGUG00000025459 UBA1 (ENSTGUG00000020872) ENSTGUG00000029102 ENSTGUG00000027947 ENSTGUG00000019736 ENSTGUG00000027775 ENSTGUG00000022259 ENSTGUG00000022796 ##22 ENSTGUG00000020951 ENSTGUG00000019568 ENSTGUG00000029601 ENSTGUG00000025634 OTUD5 (ENSTGUG00000025602) SRPK3 (ENSTGUG00000021949) ENSTGUG00000026718 ENSTGUG00000025286 ENSTGUG00000023368 ENSTGUG00000029033 ENSTGUG00000024305 ENSTGUG00000026390 ENSTGUG00000022784 LWS (ENSTGUG00000020605) SWS2 (ENSTGUG00000026520) Common canary MODERN SPECIES 525 ENSSCAG00000001488 ##22 Neognathae_c ANCESTRAL SPECIES 104 ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00990000204190 Golden eagle MODERN SPECIES 56 ENSACCG00020016331 ##22 TSR2 (ENSACCG00020010392) ENSACCG00020010405 ENSACCG00020010414 PHF8 (ENSACCG00020010436) ENSACCG00020010459 HUWE1 (ENSACCG00020015067) GNL3L (ENSACCG00020016701) ENSACCG00020016704 PFKFB1 (ENSACCG00020016708) HSD17B10 (ENSACCG00020016714) NAA10 (ENSACCG00020016717) ENSACCG00020016722 ENSACCG00020016723 CCDC22 (ENSACCG00020016726) CACNA1F (ENSACCG00020016732) Kakapo MODERN SPECIES 44 ENSSHBG00005009173 GRM6 (ENSSHBG00005008372) ##22 ENSSHBG00005008248 Cryptodira ANCESTRAL SPECIES 81 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 40 ENSGT00390000018078 ENSGT00940000160485.a ENSGT00940000156963.a.b ENSGT00390000016016.B ENSGT00940000160369.g ENSGT00390000003022 ENSGT00940000165541 ENSGT00940000158975 ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000153832.e.a ENSGT00940000153832.e.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.f ##22 ENSGT01030000234648.a.b.a.b.e ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT01030000234637.b.c ENSGT00390000012715.a ENSGT00390000002034 Testudinidae ANCESTRAL SPECIES 46 ENSGT00390000018078 ENSGT00940000160485.a ENSGT00940000156963.a.b ENSGT00940000160369.g ENSGT00390000003022 ENSGT00940000165541 ENSGT00940000158975 ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00930000151076 ENSGT00940000153832.e.a ENSGT00940000153832.e.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.f ##22 ENSGT01030000234648.a.b.a.b.e ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT01030000234637.b.c ENSGT00390000012715.a ENSGT00390000002034 Goode s thornscrub tortoise MODERN SPECIES 169 ENSGEVG00005021055 ENSGEVG00005021057 ENSGEVG00005021059 ENSGEVG00005021060 ENSGEVG00005013905 ENSGEVG00005013936 ENSGEVG00005014031 ENSGEVG00005014316 CXXC1 (ENSGEVG00005014332) ENSGEVG00005014403 ENSGEVG00005014600 ENSGEVG00005014664 ENSGEVG00005014706 ENSGEVG00005014832 ABT1 (ENSGEVG00005014911) GRM6 (ENSGEVG00005015118) ##22 ENSGEVG00005016121 WDR13 (ENSGEVG00005016183) SUV39H1 (ENSGEVG00005016238) WAS (ENSGEVG00005016334) ##29 SLC38A5 (ENSGEVG00005016347) TBC1D25 (ENSGEVG00005016385) EBP (ENSGEVG00005016402) PORCN (ENSGEVG00005016430) FTSJ1 (ENSGEVG00005016503) ENSGEVG00005016522 PRAF2 (ENSGEVG00005016535) TFE3 (ENSGEVG00005016568) SYP (ENSGEVG00005016630) TREX2 (ENSGEVG00005016725) ENSGEVG00005016743 Emydidae ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.e ##22 Three-toed box turtle MODERN SPECIES 1006 ENSTMTG00000009116 ##22 Testudinoidea ANCESTRAL SPECIES 40 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000160485.a ENSGT00940000156963.a.b ENSGT00390000016016.B ENSGT00940000160369.g ENSGT00390000003022 ENSGT00940000165541 ENSGT00940000158975 ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000153832.e.a ENSGT00940000153832.e.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.f ##22 ENSGT01030000234648.a.b.a.b.e ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT01030000234637.b.c ENSGT00390000012715.a Emydidae ANCESTRAL SPECIES 59 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044 ENSGT00940000153832.e.a ENSGT00940000153832.e.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.f ##22 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a.q ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT01030000234637.b.c ENSGT00390000012715.a ENSGT00940000164196 ENSGT00940000159667 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 500 ENSTMTG00000004567 ##22 Three-toed box turtle MODERN SPECIES 781 ENSTMTG00000011007 ##22 painted turtle MODERN SPECIES 2027 ENSCPBG00000003498 ABT1 (ENSCPBG00000003311) ENSCPBG00000003289 ##22 Testudinidae ANCESTRAL SPECIES 46 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000160485.a ENSGT00940000156963.a.b ENSGT00940000160369.g ENSGT00390000003022 ENSGT00940000165541 ENSGT00940000158975 ENSGT00390000006665.b ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00930000151076 ENSGT00940000153832.e.a ENSGT00940000153832.e.b ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.f ##22 ENSGT01030000234648.a.b.a.b.e ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00730000111146 ENSGT00390000008631.b ENSGT00940000154102.b ENSGT00940000157503 ENSGT01030000234637.b.c ENSGT00390000012715.a Abingdon island giant tortoise MODERN SPECIES 2751 NDUFB11 (ENSCABG00000018023) UBA1 (ENSCABG00000016462) ENSCABG00000016449 ENSCABG00000016446 IMP4 (ENSCABG00000016445) ENSCABG00000016444 ENSCABG00000016443 MON1B (ENSCABG00000016441) CXXC1 (ENSCABG00000016437) ENSCABG00000016418 ENSCABG00000016414 ENSCABG00000016413 ENSCABG00000016405 ENSCABG00000016401 ENSCABG00000016396 GRM6 (ENSCABG00000016254) ##22 ENSCABG00000016250 SUV39H1 (ENSCABG00000016244) WAS (ENSCABG00000016243) ##29 SLC38A5 (ENSCABG00000016241) TBC1D25 (ENSCABG00000016239) EBP (ENSCABG00000016236) PORCN (ENSCABG00000016181) FTSJ1 (ENSCABG00000016180) PRAF2 (ENSCABG00000016179) CCDC120 (ENSCABG00000016178) TFE3 (ENSCABG00000016176) SYP (ENSCABG00000016175) ENSCABG00000016173 IQSEC2 (ENSCABG00000016172) SMC1A (ENSCABG00000014810) Chinese turtle MODERN SPECIES 1667 ABT1 (ENSPSIG00000010152) GRM6 (ENSPSIG00000009310) ##22 ENSPSIG00000009114 SUV39H1 (ENSPSIG00000008563) ENSPSIG00000008428 TBC1D25 (ENSPSIG00000001256) EBP (ENSPSIG00000008241) PORCN (ENSPSIG00000007476) ENSPSIG00000007020 TFE3 (ENSPSIG00000006242) TREX2 (ENSPSIG00000006116) Mammalia ANCESTRAL SPECIES 46 ENSGT00940000160485 ENSGT00940000156963.a.b ENSGT00940000158975 ENSGT00940000165541 ENSGT00390000003022 ENSGT00940000160369 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000155317.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT00940000159563 ENSGT00940000161156 ENSGT00940000159128 ENSGT00390000017780.e ENSGT00950000183102.C ENSGT00950000182827.B ENSGT00940000161689 ENSGT00940000158963 Theria ANCESTRAL SPECIES 68 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT00390000018078 ENSGT00940000157571 ENSGT00940000161209 ENSGT00940000161081 ENSGT00940000161978 ENSGT00940000159633 Eutheria ANCESTRAL SPECIES 6 ENSGT00940000157465 ENSGT00940000178460 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 Atlantogenata ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b Xenarthra ANCESTRAL SPECIES 1257 ENSGT00940000156647 ENSGT00940000162715 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162743 Armadillo MODERN SPECIES 1741 ADAMTS2 (ENSDNOG00000025298) ZNF354C (ENSDNOG00000011675) GRM6 (ENSDNOG00000010132) ##22 ZFP2 (ENSDNOG00000006562) ENSDNOG00000035619 ZNF354B (ENSDNOG00000031129) ENSDNOG00000046988 ENSDNOG00000039312 ENSDNOG00000049731 ENSDNOG00000042262 ENSDNOG00000038880 SNTG1 (ENSDNOG00000016423) Afrotheria ANCESTRAL SPECIES 123 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b Tenrec MODERN SPECIES 7036 GRM6 (ENSETEG00000019306) ##22 ENSETEG00000019303 Afrotheria_a ANCESTRAL SPECIES 127 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ENSGT00950000183007.a.b.g.a.b.b Elephant MODERN SPECIES 2 RNF130 (ENSLAFG00000008735) TBC1D9B (ENSLAFG00000018254) MRNIP (ENSLAFG00000028457) SQSTM1 (ENSLAFG00000028515) MGAT4B (ENSLAFG00000030911) ENSLAFG00000017123 LTC4S (ENSLAFG00000020490) MAML1 (ENSLAFG00000000515) CANX (ENSLAFG00000000512) ENSLAFG00000001132 ENSLAFG00000015766 RUFY1 (ENSLAFG00000015754) ADAMTS2 (ENSLAFG00000006120) ZNF354C (ENSLAFG00000006476) ZNF879 (ENSLAFG00000018662) GRM6 (ENSLAFG00000022818) ##22 MGAT1 (ENSLAFG00000009734) ZFP62 (ENSLAFG00000010486) BTNL9 (ENSLAFG00000010886) ENSLAFG00000028767 ENSLAFG00000029553 ENSLAFG00000028643 ENSLAFG00000030931 ENSLAFG00000031543 ENSLAFG00000027573 ENSLAFG00000029252 ENSLAFG00000031758 ENSLAFG00000029830 ENSLAFG00000029708 TRIM7 (ENSLAFG00000012263) ENSLAFG00000011744 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000157465 ENSGT00940000178460 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Suina ANCESTRAL SPECIES 11 ENSGT00940000157465 ENSGT00940000178460 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Chacoan peccary MODERN SPECIES 203 RASGEF1C (ENSCWAG00000021970) RNF130 (ENSCWAG00000000068) TBC1D9B (ENSCWAG00000000150) MRNIP (ENSCWAG00000000234) SQSTM1 (ENSCWAG00000000263) MGAT4B (ENSCWAG00000000289) LTC4S (ENSCWAG00000000309) MAML1 (ENSCWAG00000000338) CANX (ENSCWAG00000000423) ENSCWAG00000000440 HNRNPH1 (ENSCWAG00000000465) RUFY1 (ENSCWAG00000000548) ADAMTS2 (ENSCWAG00000000631) ZNF354C (ENSCWAG00000000692) ZNF879 (ENSCWAG00000000708) GRM6 (ENSCWAG00000000721) ##22 ZNF454 (ENSCWAG00000000753) ZFP2 (ENSCWAG00000000774) ZNF354B (ENSCWAG00000000786) PROP1 (ENSCWAG00000000841) ENSCWAG00000000855 ZNF354A (ENSCWAG00000000870) CLK4 (ENSCWAG00000000896) COL23A1 (ENSCWAG00000000955) PHYKPL (ENSCWAG00000001058) HNRNPAB (ENSCWAG00000001091) NHP2 (ENSCWAG00000001147) RMND5B (ENSCWAG00000001174) N4BP3 (ENSCWAG00000001193) B4GALT7 (ENSCWAG00000001212) TMED9 (ENSCWAG00000001233) Pig MODERN SPECIES 10 ENSSSCG00000055787 TBC1D9B (ENSSSCG00000014014) ENSSSCG00000014015 SQSTM1 (ENSSSCG00000014016) MGAT4B (ENSSSCG00000014017) LTC4S (ENSSSCG00000028488) MAML1 (ENSSSCG00000014019) CANX (ENSSSCG00000014020) ENSSSCG00000014021 ENSSSCG00000063154 HNRNPH1 (ENSSSCG00000014022) RUFY1 (ENSSSCG00000014023) ADAMTS2 (ENSSSCG00000024043) ZNF354C (ENSSSCG00000021640) ZNF879 (ENSSSCG00000052203) GRM6 (ENSSSCG00000014027) ##22 ZNF454 (ENSSSCG00000027351) ZFP2 (ENSSSCG00000029380) ZNF354B (ENSSSCG00000028295) ENSSSCG00000034785 MSANTD5 (ENSSSCG00000042891) PROP1 (ENSSSCG00000029569) ENSSSCG00000051188 ENSSSCG00000044183 ZNF354A (ENSSSCG00000053800) CLK4 (ENSSSCG00000014028) COL23A1 (ENSSSCG00000014029) PHYKPL (ENSSSCG00000014030) ENSSSCG00000014031 ENSSSCG00000039635 RMND5B (ENSSSCG00000014033) Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00940000154756.A Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00940000154756.A.ld Pecora ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.ld ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 ENSGT00950000183080.a.b.a.b.b Yarkand deer MODERN SPECIES 32 SQSTM1 (ENSCHYG00000024608) ENSCHYG00000024695 MGAT4B (ENSCHYG00000024710) LTC4S (ENSCHYG00000024793) MAML1 (ENSCHYG00000024853) CANX (ENSCHYG00000024917) ENSCHYG00000025001 ENSCHYG00000025054 ENSCHYG00000025060 HNRNPH1 (ENSCHYG00000025070) RUFY1 (ENSCHYG00000025163) ADAMTS2 (ENSCHYG00000025226) ENSCHYG00000025422 ZNF354C (ENSCHYG00000025442) ZNF879 (ENSCHYG00000025473) GRM6 (ENSCHYG00000025499) ##22 ZNF454 (ENSCHYG00000009231) ZFP2 (ENSCHYG00000009266) ENSCHYG00000009280 ENSCHYG00000009333 RNF187 (ENSCHYG00000009353) ENSCHYG00000009390 H2AC25 (ENSCHYG00000009419) H3-4 (ENSCHYG00000009438) TRIM17 (ENSCHYG00000009461) TRIM11 (ENSCHYG00000009542) ENSCHYG00000009620 ENSCHYG00000009774 ENSCHYG00000009985 IBA57 (ENSCHYG00000010014) GJC2 (ENSCHYG00000010036) Percora_a ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.ld ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 ENSGT00950000183080.a.b.a.b.b Bovidae ANCESTRAL SPECIES ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.ld ENSGT00940000154756.A.kd.b ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 Caprinae ANCESTRAL SPECIES 32 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334.a ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.ld ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 Goat MODERN SPECIES 26 RNF130 (ENSCHIG00000026077) TBC1D9B (ENSCHIG00000009249) MRNIP (ENSCHIG00000017185) SQSTM1 (ENSCHIG00000022932) ENSCHIG00000000618 MGAT4B (ENSCHIG00000010088) LTC4S (ENSCHIG00000026999) MAML1 (ENSCHIG00000024765) CANX (ENSCHIG00000000679) CBY3 (ENSCHIG00000015238) HNRNPH1 (ENSCHIG00000021285) RUFY1 (ENSCHIG00000025380) ADAMTS2 (ENSCHIG00000027055) ZNF354C (ENSCHIG00000014371) ZNF879 (ENSCHIG00000020873) GRM6 (ENSCHIG00000024892) ##22 ZNF454 (ENSCHIG00000013008) ZFP2 (ENSCHIG00000010314) ENSCHIG00000025835 RNF187 (ENSCHIG00000012732) H2BC26 (ENSCHIG00000009284) H2AC25 (ENSCHIG00000006649) H3-4 (ENSCHIG00000008243) TRIM17 (ENSCHIG00000017072) TRIM11 (ENSCHIG00000010660) OBSCN (ENSCHIG00000026141) IBA57 (ENSCHIG00000025813) GJC2 (ENSCHIG00000012045) GUK1 (ENSCHIG00000020301) MRPL55 (ENSCHIG00000024153) C1orf35 (ENSCHIG00000020666) Rambouillet Sheep MODERN SPECIES 21 ENSOARG00020013782 ENSOARG00020013856 SQSTM1 (ENSOARG00020014013) ENSOARG00020014482 MGAT4B (ENSOARG00020014516) LTC4S (ENSOARG00020014721) MAML1 (ENSOARG00020014863) CANX (ENSOARG00020014950) ENSOARG00020015166 HNRNPH1 (ENSOARG00020015212) ENSOARG00020015427 ENSOARG00020015796 ADAMTS2 (ENSOARG00020015867) ENSOARG00020016295 ZNF354C (ENSOARG00020016338) GRM6 (ENSOARG00020016554) ##22 ZNF454 (ENSOARG00020016811) ZFP2 (ENSOARG00020016872) RNF187 (ENSOARG00020016886) HIST3H2BB (ENSOARG00020016921) H2AC25 (ENSOARG00020016951) H3-4 (ENSOARG00020016979) TRIM17 (ENSOARG00020017007) TRIM11 (ENSOARG00020017090) IBA57 (ENSOARG00020018299) GJC2 (ENSOARG00020018337) GUK1 (ENSOARG00020018354) MRPL55 (ENSOARG00020018459) C1orf35 (ENSOARG00020018506) ARF1 (ENSOARG00020018572) WNT3A (ENSOARG00020018613) Bovinae ANCESTRAL SPECIES 34 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00940000154756.A.kd.b.a.a ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 Bos ANCESTRAL SPECIES 34 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00390000009312.n.b ENSGT00940000154756.A.kd.b.a.a.b ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 Bos_a ANCESTRAL SPECIES 29 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00390000009312.n.b ENSGT00940000154756.A.kd.b.a.a.a ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 Domestic yak MODERN SPECIES 27 TBC1D9B (ENSBGRG00000004939) MRNIP (ENSBGRG00000004791) ENSBGRG00000004761 SQSTM1 (ENSBGRG00000004587) MGAT4B (ENSBGRG00000004400) LTC4S (ENSBGRG00000004319) MAML1 (ENSBGRG00000004268) CANX (ENSBGRG00000004174) CBY3 (ENSBGRG00000004121) HNRNPH1 (ENSBGRG00000003913) RUFY1 (ENSBGRG00000003711) ENSBGRG00000003670 ENSBGRG00000003653 ADAMTS2 (ENSBGRG00000003554) ZNF354C (ENSBGRG00000003526) GRM6 (ENSBGRG00000003481) ##22 ZNF454 (ENSBGRG00000003460) ENSBGRG00000003452 RNF187 (ENSBGRG00000003438) H2AC25 (ENSBGRG00000003429) H3-4 (ENSBGRG00000003421) ENSBGRG00000003415 TRIM17 (ENSBGRG00000003402) TRIM11 (ENSBGRG00000003387) ENSBGRG00000003375 IBA57 (ENSBGRG00000003172) GJC2 (ENSBGRG00000003164) GUK1 (ENSBGRG00000003137) MRPL55 (ENSBGRG00000003109) C1orf35 (ENSBGRG00000003092) ARF1 (ENSBGRG00000003083) Wild yak MODERN SPECIES 2149 ZNF879 (ENSBMUG00000002790) GRM6 (ENSBMUG00000002826) ##22 ZNF454 (ENSBMUG00000002862) ZFP2 (ENSBMUG00000002880) Bos_b ANCESTRAL SPECIES 36 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00390000008903.g.b.b ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00390000009510 ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00940000153092.a.a.c.b ENSGT01100000263514.A.e.b ENSGT00940000162155 ENSGT00940000160371 ENSGT00390000009312.n.b ENSGT00940000154756.A.kd.b.a.a.b ENSGT00390000006465 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00940000155815 ENSGT00390000010309 ENSGT00390000005590 Cow MODERN SPECIES 26 MRNIP (ENSBTAG00000015602) SQSTM1 (ENSBTAG00000015591) ENSBTAG00000052483 MGAT4B (ENSBTAG00000009738) LTC4S (ENSBTAG00000009737) MAML1 (ENSBTAG00000050347) CANX (ENSBTAG00000048107) CBY3 (ENSBTAG00000046663) HNRNPH1 (ENSBTAG00000009389) RUFY1 (ENSBTAG00000019868) ADAMTS2 (ENSBTAG00000014665) ZNF354C (ENSBTAG00000002281) ENSBTAG00000055301 ZNF879 (ENSBTAG00000038541) ENSBTAG00000034973 GRM6 (ENSBTAG00000016187) ##22 ZNF454 (ENSBTAG00000004262) ZFP2 (ENSBTAG00000007122) ENSBTAG00000052690 RNF187 (ENSBTAG00000019667) H2BC26 (ENSBTAG00000053467) H2AC25 (ENSBTAG00000037964) H3-4 (ENSBTAG00000055153) TRIM17 (ENSBTAG00000018673) TRIM11 (ENSBTAG00000039246) ENSBTAG00000007820 ENSBTAG00000040028 ENSBTAG00000051744 ENSBTAG00000049190 IBA57 (ENSBTAG00000014918) GJC2 (ENSBTAG00000014916) Hybrid Bos Indicus MODERN SPECIES 26 GFPT2 (ENSBIXG00005030150) MAPK9 (ENSBIXG00005030066) RASGEF1C (ENSBIXG00005029974) RNF130 (ENSBIXG00005029909) TBC1D9B (ENSBIXG00005029826) SQSTM1 (ENSBIXG00005029735) MGAT4B (ENSBIXG00005029717) LTC4S (ENSBIXG00005029703) MAML1 (ENSBIXG00005029688) CANX (ENSBIXG00005029662) ENSBIXG00005029650 HNRNPH1 (ENSBIXG00005029588) RUFY1 (ENSBIXG00005029537) ADAMTS2 (ENSBIXG00005029444) ZNF354C (ENSBIXG00005029390) GRM6 (ENSBIXG00005029370) ##22 ZNF454 (ENSBIXG00005029356) RNF187 (ENSBIXG00005029336) H2BC26 (ENSBIXG00005029334) H2AC25 (ENSBIXG00005029330) ENSBIXG00005029327 H3-4 (ENSBIXG00005029320) TRIM17 (ENSBIXG00005029306) TRIM11 (ENSBIXG00005029289) ENSBIXG00005029278 OBSCN (ENSBIXG00005010529) ENSBIXG00005010951 IBA57 (ENSBIXG00005010975) GUK1 (ENSBIXG00005011045) MRPL55 (ENSBIXG00005011160) C1orf35 (ENSBIXG00005001035) American bison MODERN SPECIES 3366 ENSBBBG00000013465 ENSBBBG00000013442 ENSBBBG00000013424 SQSTM1 (ENSBBBG00000013370) ENSBBBG00000002719 MGAT4B (ENSBBBG00000001606) LTC4S (ENSBBBG00000013326) MAML1 (ENSBBBG00000002705) CANX (ENSBBBG00000001618) CBY3 (ENSBBBG00000013250) HNRNPH1 (ENSBBBG00000002667) RUFY1 (ENSBBBG00000013083) ADAMTS2 (ENSBBBG00000013027) ZNF354C (ENSBBBG00000012969) ZNF879 (ENSBBBG00000012952) GRM6 (ENSBBBG00000002558) ##22 ZNF454 (ENSBBBG00000012911) ZFP2 (ENSBBBG00000012903) ENSBBBG00000012896 ENSBBBG00000012877 H2BC26 (ENSBBBG00000012861) H2AC25 (ENSBBBG00000002529) ENSBBBG00000012856 SPAG17 (ENSBBBG00000001749) WDR3 (ENSBBBG00000012825) GDAP2 (ENSBBBG00000002478) TENT5C (ENSBBBG00000007449) MAN1A2 (ENSBBBG00000012766) VTCN1 (ENSBBBG00000002434) TRIM45 (ENSBBBG00000012597) TTF2 (ENSBBBG00000012568) Siberian musk deer MODERN SPECIES 1213 FLT4 (ENSMMSG00000024202) ZNF354C (ENSMMSG00000024233) ZNF879 (ENSMMSG00000019906) GRM6 (ENSMMSG00000019933) ##22 ZNF454 (ENSMMSG00000019980) RNF187 (ENSMMSG00000020017) H2BC26 (ENSMMSG00000020045) H2AC25 (ENSMMSG00000020054) H3-4 (ENSMMSG00000020062) TRIM17 (ENSMMSG00000020070) TRIM11 (ENSMMSG00000020106) OBSCN (ENSMMSG00000020369) IBA57 (ENSMMSG00000022482) GJC2 (ENSMMSG00000022491) GUK1 (ENSMMSG00000022498) MRPL55 (ENSMMSG00000022520) C1orf35 (ENSMMSG00000022529) ARF1 (ENSMMSG00000022533) WNT3A (ENSMMSG00000022541) Cetacea ANCESTRAL SPECIES 1 ENSGT00940000157465 ENSGT00950000184876 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b.rb.a ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00940000154756.A.kd.a Blue whale MODERN SPECIES 14 ENSBMSG00010008160 TBC1D9B (ENSBMSG00010008220) MRNIP (ENSBMSG00010008305) SQSTM1 (ENSBMSG00010008322) MGAT4B (ENSBMSG00010008352) LTC4S (ENSBMSG00010008396) MAML1 (ENSBMSG00010008423) CANX (ENSBMSG00010008443) CBY3 (ENSBMSG00010008469) HNRNPH1 (ENSBMSG00010008502) RUFY1 (ENSBMSG00010008550) ENSBMSG00010008570 ENSBMSG00010008587 ENSBMSG00010008598 ZNF879 (ENSBMSG00010008639) GRM6 (ENSBMSG00010008657) ##22 ZNF454 (ENSBMSG00010008671) ZFP2 (ENSBMSG00010008682) ZNF354B (ENSBMSG00010008689) JMJD4 (ENSBMSG00010008694) SNAP47 (ENSBMSG00010008703) PRSS38 (ENSBMSG00010008714) WNT9A (ENSBMSG00010008726) WNT3A (ENSBMSG00010008734) ENSBMSG00010008747 C1orf35 (ENSBMSG00010008763) ENSBMSG00010008778 GUK1 (ENSBMSG00010008805) GJC2 (ENSBMSG00010008838) IBA57 (ENSBMSG00010008847) ENSBMSG00010008859 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000157465 ENSGT00950000184876 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b.rb.a ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00990000211596 Sperm whale MODERN SPECIES 11 TBC1D9B (ENSPCTG00005001115) MRNIP (ENSPCTG00005001159) SQSTM1 (ENSPCTG00005001251) MGAT4B (ENSPCTG00005001282) LTC4S (ENSPCTG00005001322) MAML1 (ENSPCTG00005001342) CANX (ENSPCTG00005001359) ENSPCTG00005001383 HNRNPH1 (ENSPCTG00005001402) RUFY1 (ENSPCTG00005001444) ENSPCTG00005001527 ADAMTS2 (ENSPCTG00005001538) ZNF354C (ENSPCTG00005001563) ZNF879 (ENSPCTG00005001578) ENSPCTG00005001587 GRM6 (ENSPCTG00005001608) ##22 ZNF454 (ENSPCTG00005001630) ZFP2 (ENSPCTG00005001642) ZNF354B (ENSPCTG00005001661) JMJD4 (ENSPCTG00005001672) SNAP47 (ENSPCTG00005001687) PRSS38 (ENSPCTG00005001709) WNT9A (ENSPCTG00005001728) WNT3A (ENSPCTG00005001738) ARF1 (ENSPCTG00005001753) C1orf35 (ENSPCTG00005001766) ENSPCTG00005001780 GUK1 (ENSPCTG00005001793) GJC2 (ENSPCTG00005001808) IBA57 (ENSPCTG00005001814) ENSPCTG00005001819 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000157465 ENSGT00950000184876 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b.rb.a ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00990000211596 Dolphin MODERN SPECIES 2137 GRM6 (ENSTTRG00000012883) ##22 ZNF454 (ENSTTRG00000012880) Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT00940000155143.mb.b.a ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b.rb.a ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00990000211596 Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT00940000155143.mb.b.a ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a.b ENSGT00940000159618 ENSGT00940000160510 ENSGT00950000183080.a.b.a.b.b.rb.a ENSGT00390000005590 ENSGT00390000010309 ENSGT00940000155815 ENSGT01090000260005.a.a.a.b.a.a.a ENSGT00390000006465 ENSGT00990000211596 Narwhal MODERN SPECIES 298 MRNIP (ENSMMNG00015002797) SQSTM1 (ENSMMNG00015002834) MGAT4B (ENSMMNG00015002877) LTC4S (ENSMMNG00015002934) ENSMMNG00015002960 MAML1 (ENSMMNG00015002970) CANX (ENSMMNG00015002989) ENSMMNG00015003017 ENSMMNG00015003071 RUFY1 (ENSMMNG00015003190) ADAMTS2 (ENSMMNG00015003260) ENSMMNG00015003278 ZNF354C (ENSMMNG00015003290) ZNF879 (ENSMMNG00015003310) ENSMMNG00015003325 GRM6 (ENSMMNG00015003345) ##22 ZNF454 (ENSMMNG00015003376) ZFP2 (ENSMMNG00015003397) ZNF354B (ENSMMNG00015003424) JMJD4 (ENSMMNG00015003436) SNAP47 (ENSMMNG00015003455) ENSMMNG00015003473 PRSS38 (ENSMMNG00015003487) WNT9A (ENSMMNG00015003510) WNT3A (ENSMMNG00015003522) ENSMMNG00015003538 C1orf35 (ENSMMNG00015003552) MRPL55 (ENSMMNG00015003572) GUK1 (ENSMMNG00015003608) GJC2 (ENSMMNG00015003654) IBA57 (ENSMMNG00015003669) Beluga whale MODERN SPECIES 93 MRNIP (ENSDLEG00000016990) SQSTM1 (ENSDLEG00000016971) MGAT4B (ENSDLEG00000016952) LTC4S (ENSDLEG00000016932) MAML1 (ENSDLEG00000016920) CANX (ENSDLEG00000016884) ENSDLEG00000012884 ENSDLEG00000012869 RUFY1 (ENSDLEG00000012804) ENSDLEG00000012788 ENSDLEG00000012767 ADAMTS2 (ENSDLEG00000012411) ZNF354C (ENSDLEG00000012363) ZNF879 (ENSDLEG00000012354) ENSDLEG00000012347 GRM6 (ENSDLEG00000012287) ##22 ZNF454 (ENSDLEG00000012270) ZFP2 (ENSDLEG00000012263) ZNF354B (ENSDLEG00000012249) JMJD4 (ENSDLEG00000012232) SNAP47 (ENSDLEG00000012222) PRSS38 (ENSDLEG00000012200) WNT9A (ENSDLEG00000012170) WNT3A (ENSDLEG00000012150) ENSDLEG00000012142 ENSDLEG00000012123 MRPL55 (ENSDLEG00000012111) GUK1 (ENSDLEG00000012045) GJC2 (ENSDLEG00000012033) IBA57 (ENSDLEG00000012021) ENSDLEG00000012007 Vaquita MODERN SPECIES 14 RNF130 (ENSPSNG00000009870) TBC1D9B (ENSPSNG00000009691) MRNIP (ENSPSNG00000009411) SQSTM1 (ENSPSNG00000009189) MGAT4B (ENSPSNG00000009081) LTC4S (ENSPSNG00000008981) ENSPSNG00000008956 MAML1 (ENSPSNG00000008918) CANX (ENSPSNG00000008859) CBY3 (ENSPSNG00000008816) ENSPSNG00000008738 RUFY1 (ENSPSNG00000008611) ADAMTS2 (ENSPSNG00000008224) ZNF879 (ENSPSNG00000008106) ENSPSNG00000008070 GRM6 (ENSPSNG00000007996) ##22 ZNF454 (ENSPSNG00000007949) ZFP2 (ENSPSNG00000007917) ZNF354B (ENSPSNG00000007886) JMJD4 (ENSPSNG00000007858) SNAP47 (ENSPSNG00000007830) PRSS38 (ENSPSNG00000007771) WNT9A (ENSPSNG00000007743) WNT3A (ENSPSNG00000007708) ENSPSNG00000007683 C1orf35 (ENSPSNG00000007656) MRPL55 (ENSPSNG00000007632) GUK1 (ENSPSNG00000007583) GJC2 (ENSPSNG00000007534) IBA57 (ENSPSNG00000007499) ENSPSNG00000003866 Camelidae ANCESTRAL SPECIES 57 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Alpaca MODERN SPECIES 2215 ENSVPAG00000011197 ##22 ZNF454 (ENSVPAG00000011195) ZNF354B (ENSVPAG00000011193) Arabian camel MODERN SPECIES 14 RNF130 (ENSCDRG00005005219) ENSCDRG00005005418 ENSCDRG00005005487 MRNIP (ENSCDRG00005005511) SQSTM1 (ENSCDRG00005005528) MGAT4B (ENSCDRG00005005565) LTC4S (ENSCDRG00005005617) MAML1 (ENSCDRG00005005672) CANX (ENSCDRG00005005708) ENSCDRG00005005737 HNRNPH1 (ENSCDRG00005005774) RUFY1 (ENSCDRG00005005851) ADAMTS2 (ENSCDRG00005005953) ZNF354C (ENSCDRG00005006750) ZNF879 (ENSCDRG00005006793) GRM6 (ENSCDRG00005006835) ##22 ZNF454 (ENSCDRG00005006909) ZFP2 (ENSCDRG00005006933) ZNF354B (ENSCDRG00005006982) ENSCDRG00005007004 PROP1 (ENSCDRG00005007026) ZNF354A (ENSCDRG00005007068) CLK4 (ENSCDRG00005007120) COL23A1 (ENSCDRG00005007256) PHYKPL (ENSCDRG00005007428) HNRNPAB (ENSCDRG00005007513) NHP2 (ENSCDRG00005007619) RMND5B (ENSCDRG00005007687) N4BP3 (ENSCDRG00005007852) B4GALT7 (ENSCDRG00005007898) TMED9 (ENSCDRG00005007989) Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Carnivora ANCESTRAL SPECIES 8 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Mustelinae ANCESTRAL SPECIES 92 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 American mink MODERN SPECIES 311 MRNIP (ENSNVIG00000009983) SQSTM1 (ENSNVIG00000009967) MGAT4B (ENSNVIG00000009946) ENSNVIG00000009938 MAML1 (ENSNVIG00000009929) ENSNVIG00000009926 CANX (ENSNVIG00000009897) ENSNVIG00000009895 ENSNVIG00000009885 HNRNPH1 (ENSNVIG00000009779) RUFY1 (ENSNVIG00000009742) ENSNVIG00000009731 ADAMTS2 (ENSNVIG00000009679) ZNF354C (ENSNVIG00000009666) ZNF879 (ENSNVIG00000009657) GRM6 (ENSNVIG00000009613) ##22 ZNF454 (ENSNVIG00000009594) ZFP2 (ENSNVIG00000009587) ZNF354B (ENSNVIG00000009575) ENSNVIG00000009570 PROP1 (ENSNVIG00000009566) Ferret MODERN SPECIES 230 RNF130 (ENSMPUG00000000598) TBC1D9B (ENSMPUG00000000629) MRNIP (ENSMPUG00000000636) SQSTM1 (ENSMPUG00000000653) MGAT4B (ENSMPUG00000000665) LTC4S (ENSMPUG00000000668) MAML1 (ENSMPUG00000000684) CANX (ENSMPUG00000000686) CBY3 (ENSMPUG00000018459) RUFY1 (ENSMPUG00000000690) HNRNPH1 (ENSMPUG00000000693) ENSMPUG00000000697 ADAMTS2 (ENSMPUG00000000699) ZNF354C (ENSMPUG00000000700) ZNF879 (ENSMPUG00000000701) GRM6 (ENSMPUG00000000702) ##22 ZNF454 (ENSMPUG00000000725) ZFP2 (ENSMPUG00000018460) ZNF354B (ENSMPUG00000000728) PROP1 (ENSMPUG00000000729) ENSMPUG00000000730 ENSMPUG00000018461 ZNF354A (ENSMPUG00000000732) ENSMPUG00000000735 CLK4 (ENSMPUG00000000737) COL23A1 (ENSMPUG00000000738) PHYKPL (ENSMPUG00000000742) HNRNPAB (ENSMPUG00000000743) RMND5B (ENSMPUG00000000746) NHP2 (ENSMPUG00000000747) N4BP3 (ENSMPUG00000000751) Ursidae ANCESTRAL SPECIES 16 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.k.b ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Giant Panda MODERN SPECIES 13 GFPT2 (ENSAMEG00000000889) MAPK9 (ENSAMEG00000000853) RASGEF1C (ENSAMEG00000000806) RNF130 (ENSAMEG00000008631) TBC1D9B (ENSAMEG00000008647) MRNIP (ENSAMEG00000008734) SQSTM1 (ENSAMEG00000008746) MGAT4B (ENSAMEG00000008776) LTC4S (ENSAMEG00000008821) MAML1 (ENSAMEG00000008832) CANX (ENSAMEG00000008836) CBY3 (ENSAMEG00000026250) HNRNPH1 (ENSAMEG00000008888) ENSAMEG00000008993 ZNF354C (ENSAMEG00000009025) GRM6 (ENSAMEG00000009029) ##22 ZNF454 (ENSAMEG00000030594) ZNF354B (ENSAMEG00000009090) ENSAMEG00000023862 ENSAMEG00000023808 PROP1 (ENSAMEG00000030265) ENSAMEG00000020203 ZNF354A (ENSAMEG00000009107) CLK4 (ENSAMEG00000009109) COL23A1 (ENSAMEG00000006381) PHYKPL (ENSAMEG00000006429) HNRNPAB (ENSAMEG00000006465) NHP2 (ENSAMEG00000006471) RMND5B (ENSAMEG00000006489) ENSAMEG00000006518 ENSAMEG00000006527 Ursus ANCESTRAL SPECIES 111 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00950000185542 ENSGT00940000159222 ENSGT00940000154735.k.b ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747.mb American black bear MODERN SPECIES 5625 GRM6 (ENSUAMG00000026250) ##22 ZNF454 (ENSUAMG00000026246) Canidae ANCESTRAL SPECIES 9 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330 ENSGT00940000162292 ENSGT00390000008029.d ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Dingo MODERN SPECIES 238 RNF130 (ENSCAFG00020002599) TBC1D9B (ENSCAFG00020002609) MRNIP (ENSCAFG00020002630) SQSTM1 (ENSCAFG00020002634) MGAT4B (ENSCAFG00020002640) LTC4S (ENSCAFG00020002654) MAML1 (ENSCAFG00020002665) ENSCAFG00020002674 CANX (ENSCAFG00020002678) CBY3 (ENSCAFG00020002701) HNRNPH1 (ENSCAFG00020002712) RUFY1 (ENSCAFG00020002806) ADAMTS2 (ENSCAFG00020002876) ZNF354C (ENSCAFG00020003521) ZNF879 (ENSCAFG00020003529) GRM6 (ENSCAFG00020003534) ##22 ZNF454 (ENSCAFG00020003550) ZFP2 (ENSCAFG00020003554) ZNF354B (ENSCAFG00020003559) ENSCAFG00020003565 PROP1 (ENSCAFG00020003569) ENSCAFG00020003580 ENSCAFG00020003585 ZNF354A (ENSCAFG00020003589) CLK4 (ENSCAFG00020003611) ENSCAFG00020003618 COL23A1 (ENSCAFG00020003626) PHYKPL (ENSCAFG00020003640) HNRNPAB (ENSCAFG00020003646) NHP2 (ENSCAFG00020003649) RMND5B (ENSCAFG00020003651) Dog MODERN SPECIES 2 MAPK9 (ENSCAFG00845006710) RASGEF1C (ENSCAFG00845006880) RNF130 (ENSCAFG00845007023) TBC1D9B (ENSCAFG00845007248) ENSCAFG00845007488 SQSTM1 (ENSCAFG00845007599) MGAT4B (ENSCAFG00845007711) LTC4S (ENSCAFG00845007863) MAML1 (ENSCAFG00845007951) CANX (ENSCAFG00845008030) ENSCAFG00845008156 HNRNPH1 (ENSCAFG00845008269) RUFY1 (ENSCAFG00845008457) ADAMTS2 (ENSCAFG00845008674) ZNF879 (ENSCAFG00845008945) GRM6 (ENSCAFG00845009049) ##22 ZNF454 (ENSCAFG00845009113) ZFP2 (ENSCAFG00845009219) ZNF354B (ENSCAFG00845009251) OR1AD1 (ENSCAFG00845009275) PROP1 (ENSCAFG00845009295) ZNF354A (ENSCAFG00845009328) ENSCAFG00845009369 CLK4 (ENSCAFG00845009410) COL23A1 (ENSCAFG00845009535) PHYKPL (ENSCAFG00845009776) HNRNPAB (ENSCAFG00845009974) NHP2 (ENSCAFG00845010060) RMND5B (ENSCAFG00845010127) N4BP3 (ENSCAFG00845010223) TMED9 (ENSCAFG00845010269) Red fox MODERN SPECIES 111 RNF130 (ENSVVUG00000001731) TBC1D9B (ENSVVUG00000001699) MRNIP (ENSVVUG00000001675) SQSTM1 (ENSVVUG00000001644) MGAT4B (ENSVVUG00000001609) LTC4S (ENSVVUG00000001534) MAML1 (ENSVVUG00000001479) CANX (ENSVVUG00000001443) ENSVVUG00000001423 HNRNPH1 (ENSVVUG00000001397) RUFY1 (ENSVVUG00000001379) ADAMTS2 (ENSVVUG00000001350) ZNF354C (ENSVVUG00000001301) ZNF879 (ENSVVUG00000001298) GRM6 (ENSVVUG00000001275) ##22 ZNF454 (ENSVVUG00000001267) ZFP2 (ENSVVUG00000001258) ZNF354B (ENSVVUG00000001230) ENSVVUG00000001223 PROP1 (ENSVVUG00000001216) ENSVVUG00000001199 ZNF354A (ENSVVUG00000001168) CLK4 (ENSVVUG00000001156) PHYKPL (ENSVVUG00000001071) HNRNPAB (ENSVVUG00000001047) NHP2 (ENSVVUG00000001030) RMND5B (ENSVVUG00000001011) N4BP3 (ENSVVUG00000000991) ENSVVUG00000000970 ENSVVUG00000000418 Felidae ANCESTRAL SPECIES 6 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330.q ENSGT00940000162292 ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Panthera ANCESTRAL SPECIES 6 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330.q ENSGT00940000162330.r ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162330.q ENSGT00940000162330.r ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 lion MODERN SPECIES 146 ADAMTS2 (ENSPLOG00000015944) ZNF354C (ENSPLOG00000017279) ZNF879 (ENSPLOG00000017324) GRM6 (ENSPLOG00000017372) ##22 ZNF454 (ENSPLOG00000017464) ZFP2 (ENSPLOG00000017520) ZNF354B (ENSPLOG00000017535) leopard MODERN SPECIES 56 RASGEF1C (ENSPPRG00000001768) RNF130 (ENSPPRG00000002048) TBC1D9B (ENSPPRG00000003447) ENSPPRG00000004317 SQSTM1 (ENSPPRG00000005098) MGAT4B (ENSPPRG00000006074) LTC4S (ENSPPRG00000007076) MAML1 (ENSPPRG00000007494) CANX (ENSPPRG00000007744) CBY3 (ENSPPRG00000007762) HNRNPH1 (ENSPPRG00000008228) RUFY1 (ENSPPRG00000008370) ADAMTS2 (ENSPPRG00000009123) ZNF354C (ENSPPRG00000009858) ZNF879 (ENSPPRG00000010083) GRM6 (ENSPPRG00000010413) ##22 ZNF454 (ENSPPRG00000010811) ZFP2 (ENSPPRG00000016081) ZNF354B (ENSPPRG00000011009) ENSPPRG00000016090 ENSPPRG00000011161 PROP1 (ENSPPRG00000011246) ZNF354A (ENSPPRG00000011698) CLK4 (ENSPPRG00000013000) COL23A1 (ENSPPRG00000014776) PHYKPL (ENSPPRG00000015475) HNRNPAB (ENSPPRG00000020542) NHP2 (ENSPPRG00000022505) RMND5B (ENSPPRG00000000179) N4BP3 (ENSPPRG00000000242) B4GALT7 (ENSPPRG00000000505) Tiger MODERN SPECIES 179 GFPT2 (ENSPTIG00000016814) MAPK9 (ENSPTIG00000021236) RASGEF1C (ENSPTIG00000021261) RNF130 (ENSPTIG00000021267) TBC1D9B (ENSPTIG00000021280) ENSPTIG00000021321 SQSTM1 (ENSPTIG00000021366) MGAT4B (ENSPTIG00000021423) LTC4S (ENSPTIG00000021436) MAML1 (ENSPTIG00000021443) CANX (ENSPTIG00000021509) HNRNPH1 (ENSPTIG00000021552) RUFY1 (ENSPTIG00000021574) ADAMTS2 (ENSPTIG00000021593) ZNF879 (ENSPTIG00000021605) GRM6 (ENSPTIG00000021610) ##22 ZNF454 (ENSPTIG00000021618) ZFP2 (ENSPTIG00000008055) ZNF354B (ENSPTIG00000021623) ENSPTIG00000008063 ENSPTIG00000008066 PROP1 (ENSPTIG00000021642) ZNF354A (ENSPTIG00000021645) CLK4 (ENSPTIG00000021658) COL23A1 (ENSPTIG00000021709) PHYKPL (ENSPTIG00000021713) HNRNPAB (ENSPTIG00000021727) NHP2 (ENSPTIG00000021731) RMND5B (ENSPTIG00000021736) N4BP3 (ENSPTIG00000021764) B4GALT7 (ENSPTIG00000021765) Cat MODERN SPECIES GFPT2 (ENSFCAG00000004474) MAPK9 (ENSFCAG00000025302) RASGEF1C (ENSFCAG00000004472) TBC1D9B (ENSFCAG00000014707) MRNIP (ENSFCAG00000014705) SQSTM1 (ENSFCAG00000014700) MGAT4B (ENSFCAG00000014697) LTC4S (ENSFCAG00000019371) MAML1 (ENSFCAG00000014693) CANX (ENSFCAG00000022987) ENSFCAG00000004846 HNRNPH1 (ENSFCAG00000001204) RUFY1 (ENSFCAG00000001202) ADAMTS2 (ENSFCAG00000019013) ZNF354C (ENSFCAG00000038284) GRM6 (ENSFCAG00000009682) ##22 ZNF454 (ENSFCAG00000021971) ZNF354B (ENSFCAG00000040729) ENSFCAG00000022525 PROP1 (ENSFCAG00000044834) ENSFCAG00000028668 ZNF354A (ENSFCAG00000043514) CLK4 (ENSFCAG00000030349) COL23A1 (ENSFCAG00000045286) PHYKPL (ENSFCAG00000015542) HNRNPAB (ENSFCAG00000027603) NHP2 (ENSFCAG00000015541) RMND5B (ENSFCAG00000022567) N4BP3 (ENSFCAG00000044282) B4GALT7 (ENSFCAG00000024195) TMED9 (ENSFCAG00000042521) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000157465 ENSGT00940000178333 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b Equus ANCESTRAL SPECIES 6 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.t ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 Horse MODERN SPECIES 5 RASGEF1C (ENSECAG00000015254) RNF130 (ENSECAG00000007222) TBC1D9B (ENSECAG00000017830) MRNIP (ENSECAG00000020524) SQSTM1 (ENSECAG00000020929) MGAT4B (ENSECAG00000010844) LTC4S (ENSECAG00000020644) MAML1 (ENSECAG00000024706) CANX (ENSECAG00000003079) CBY3 (ENSECAG00000056430) HNRNPH1 (ENSECAG00000014429) RUFY1 (ENSECAG00000023719) ADAMTS2 (ENSECAG00000016328) ZNF354C (ENSECAG00000023446) ZNF879 (ENSECAG00000053026) GRM6 (ENSECAG00000023504) ##22 ZNF454 (ENSECAG00000056685) ZFP2 (ENSECAG00000005156) ZNF354B (ENSECAG00000012028) PROP1 (ENSECAG00000012415) ZNF354A (ENSECAG00000012431) CLK4 (ENSECAG00000014153) COL23A1 (ENSECAG00000041924) PHYKPL (ENSECAG00000013232) HNRNPAB (ENSECAG00000018242) NHP2 (ENSECAG00000022963) RMND5B (ENSECAG00000000675) N4BP3 (ENSECAG00000009254) B4GALT7 (ENSECAG00000011175) TMED9 (ENSECAG00000015165) ENSECAG00000022615 Donkey MODERN SPECIES 29 RNF130 (ENSEASG00005012726) TBC1D9B (ENSEASG00005028853) ENSEASG00005012662 SQSTM1 (ENSEASG00005012658) MGAT4B (ENSEASG00005012655) ENSEASG00005012654 MAML1 (ENSEASG00005012652) CANX (ENSEASG00005012649) CBY3 (ENSEASG00005012647) HNRNPH1 (ENSEASG00005012642) ENSEASG00005031517 RUFY1 (ENSEASG00005012637) ADAMTS2 (ENSEASG00005012630) ZNF354C (ENSEASG00005012627) ZNF879 (ENSEASG00005026494) GRM6 (ENSEASG00005012619) ##22 ZNF454 (ENSEASG00005012616) ZFP2 (ENSEASG00005012614) ZNF354B (ENSEASG00005037407) ENSEASG00005007167 ENSEASG00005007169 ZNF354A (ENSEASG00005030309) CLK4 (ENSEASG00005012601) COL23A1 (ENSEASG00005012585) PHYKPL (ENSEASG00005012577) ENSEASG00005012572 NHP2 (ENSEASG00005012569) RMND5B (ENSEASG00005012561) N4BP3 (ENSEASG00005012557) B4GALT7 (ENSEASG00005012554) TMED9 (ENSEASG00005012553) Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000157465 ENSGT00940000178333 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162851 ENSGT00940000162570 Megabat MODERN SPECIES 5784 ZNF354C (ENSPVAG00000007680) GRM6 (ENSPVAG00000007677) ##22 ZNF454 (ENSPVAG00000007676) ZNF354B (ENSPVAG00000007675) Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000157465 ENSGT00940000178333 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162851 Greater horseshoe bat MODERN SPECIES 16 SQSTM1 (ENSRFEG00010021248) MGAT4B (ENSRFEG00010021202) LTC4S (ENSRFEG00010021169) MAML1 (ENSRFEG00010021142) CANX (ENSRFEG00010021119) ENSRFEG00010021107 ENSRFEG00010021101 ENSRFEG00010021085 HNRNPH1 (ENSRFEG00010021042) RUFY1 (ENSRFEG00010020977) ENSRFEG00010020957 ENSRFEG00010020942 ADAMTS2 (ENSRFEG00010020822) ZNF354C (ENSRFEG00010020767) ZNF879 (ENSRFEG00010020752) GRM6 (ENSRFEG00010020725) ##22 ZNF454 (ENSRFEG00010020708) ZFP2 (ENSRFEG00010020696) ENSRFEG00010020667 JMJD4 (ENSRFEG00010020639) SNAP47 (ENSRFEG00010020620) PRSS38 (ENSRFEG00010020586) WNT9A (ENSRFEG00010020564) WNT3A (ENSRFEG00010020529) ENSRFEG00010020502 ENSRFEG00010020459 MRPL55 (ENSRFEG00010020427) ENSRFEG00010020344 GJC2 (ENSRFEG00010020305) IBA57 (ENSRFEG00010020284) OBSCN (ENSRFEG00010012968) Microbat MODERN SPECIES 1323 ADAMTS2 (ENSMLUG00000011727) GRM6 (ENSMLUG00000025416) ##22 ZNF454 (ENSMLUG00000002894) ZFP2 (ENSMLUG00000017448) ENSMLUG00000028703 EVI5L (ENSMLUG00000013657) ENSMLUG00000028297 LRRC8E (ENSMLUG00000013667) MAP2K7 (ENSMLUG00000013674) ENSMLUG00000013689 CTXN1 (ENSMLUG00000013701) TIMM44 (ENSMLUG00000013706) ENSMLUG00000008101 ENSMLUG00000008112 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Primates ANCESTRAL SPECIES 8 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.k ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 Lemuriformes ANCESTRAL SPECIES 25 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.k ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000155271 ENSGT00390000013236 ENSGT00940000160536 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ##21 ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00910000147337 Lemuriformes_a ANCESTRAL SPECIES 32 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a.k ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000155271 ENSGT00390000013236 ENSGT00940000160536 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ##21 ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00910000147337 Coquerels sifaka MODERN SPECIES 438 ADAMTS2 (ENSPCOG00000017420) ZNF354C (ENSPCOG00000020526) ZNF879 (ENSPCOG00000020986) GRM6 (ENSPCOG00000014235) ##22 ZNF454 (ENSPCOG00000016969) ENSPCOG00000016281 GNAL (ENSPCOG00000023216) ENSPCOG00000018143 IMPA2 (ENSPCOG00000013288) CIDEA (ENSPCOG00000023877) AFG3L2 (ENSPCOG00000016252) PRELID3A (ENSPCOG00000020923) ##21 SPIRE1 (ENSPCOG00000014958) CEP76 (ENSPCOG00000024636) ENSPCOG00000022274 PTPN2 (ENSPCOG00000017492) SEH1L (ENSPCOG00000017158) CEP192 (ENSPCOG00000028338) LDLRAD4 (ENSPCOG00000012700) Greater bamboo lemur MODERN SPECIES 376 RNF130 (ENSPSMG00000010915) TBC1D9B (ENSPSMG00000011075) ENSPSMG00000011137 SQSTM1 (ENSPSMG00000011174) MGAT4B (ENSPSMG00000011272) LTC4S (ENSPSMG00000011309) MAML1 (ENSPSMG00000011314) CANX (ENSPSMG00000011331) CBY3 (ENSPSMG00000011344) HNRNPH1 (ENSPSMG00000011572) RUFY1 (ENSPSMG00000011809) ADAMTS2 (ENSPSMG00000011850) ZNF354C (ENSPSMG00000011861) ZNF879 (ENSPSMG00000011864) GRM6 (ENSPSMG00000011907) ##22 ZNF454 (ENSPSMG00000011918) ZFP2 (ENSPSMG00000011924) GNAL (ENSPSMG00000012017) MPPE1 (ENSPSMG00000012056) IMPA2 (ENSPSMG00000012070) CIDEA (ENSPSMG00000012085) Mouse lemur MODERN SPECIES 10 TBC1D9B (ENSMICG00000036875) ENSMICG00000002549 SQSTM1 (ENSMICG00000006544) MGAT4B (ENSMICG00000006533) LTC4S (ENSMICG00000044735) MAML1 (ENSMICG00000034960) ENSMICG00000007943 CANX (ENSMICG00000003149) CBY3 (ENSMICG00000036379) ENSMICG00000027131 ENSMICG00000033979 RUFY1 (ENSMICG00000012324) ADAMTS2 (ENSMICG00000010523) ZNF354C (ENSMICG00000034512) ZNF879 (ENSMICG00000033568) GRM6 (ENSMICG00000000566) ##22 ZNF454 (ENSMICG00000032054) GNAL (ENSMICG00000001922) ENSMICG00000001930 IMPA2 (ENSMICG00000004775) CIDEA (ENSMICG00000007492) TUBB6 (ENSMICG00000010939) AFG3L2 (ENSMICG00000000130) PRELID3A (ENSMICG00000002779) ##21 SPIRE1 (ENSMICG00000000131) CEP76 (ENSMICG00000026464) PSMG2 (ENSMICG00000036341) ENSMICG00000041776 PTPN2 (ENSMICG00000005890) SEH1L (ENSMICG00000037641) CEP192 (ENSMICG00000017316) Bushbaby MODERN SPECIES 313 ZFYVE28 (ENSOGAG00000011309) RNF4 (ENSOGAG00000010776) FAM193A (ENSOGAG00000012386) TNIP2 (ENSOGAG00000012391) SH3BP2 (ENSOGAG00000008463) ADD1 (ENSOGAG00000011061) MFSD10 (ENSOGAG00000011069) NOP14 (ENSOGAG00000011073) GRK4 (ENSOGAG00000005619) HTT (ENSOGAG00000007586) MSANTD1 (ENSOGAG00000007605) RGS12 (ENSOGAG00000007608) DOK7 (ENSOGAG00000007622) LRPAP1 (ENSOGAG00000007628) ZNF879 (ENSOGAG00000032797) GRM6 (ENSOGAG00000029331) ##22 ENSOGAG00000034371 ZNF518B (ENSOGAG00000029956) CLNK (ENSOGAG00000012251) Haplorrhini ANCESTRAL SPECIES 4 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 Simiiformes ANCESTRAL SPECIES 6 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Platyrrhini ANCESTRAL SPECIES 19 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000154173.A.a.b ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00910000147061 ENSGT00940000162570 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611.b.b ENSGT00940000163611.b.a ENSGT00940000160338 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A Cebidae ANCESTRAL SPECIES 47 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000154173.A.a.b ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611.b.b ENSGT00940000163611.b.a ENSGT00940000160338 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A Cebidae_a ANCESTRAL SPECIES 113 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000158978 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000154173.A.a.b ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 Capuchin MODERN SPECIES 616 ADAMTS2 (ENSCCAG00000026283) ZNF354C (ENSCCAG00000018268) ZNF879 (ENSCCAG00000022061) GRM6 (ENSCCAG00000028198) ##22 ZNF454 (ENSCCAG00000024321) ZFP2 (ENSCCAG00000031494) ZNF354B (ENSCCAG00000017690) HNRNPH1 (ENSCCAG00000026563) RUFY1 (ENSCCAG00000021753) Bolivian squirrel monkey MODERN SPECIES 237 ENSSBOG00000014015 ENSSBOG00000028968 MAML1 (ENSSBOG00000021790) CANX (ENSSBOG00000034866) CBY3 (ENSSBOG00000023009) HNRNPH1 (ENSSBOG00000022306) RUFY1 (ENSSBOG00000031721) CNOT6 (ENSSBOG00000030494) ENSSBOG00000027641 SCGB3A1 (ENSSBOG00000027262) FLT4 (ENSSBOG00000031031) ENSSBOG00000025755 ADAMTS2 (ENSSBOG00000025193) ZNF354C (ENSSBOG00000015814) ZNF879 (ENSSBOG00000022474) GRM6 (ENSSBOG00000024819) ##22 ZNF454 (ENSSBOG00000028339) ZFP2 (ENSSBOG00000020675) ZNF354B (ENSSBOG00000021888) Marmoset MODERN SPECIES 11 MRNIP (ENSCJAG00000010163) SQSTM1 (ENSCJAG00000010152) MGAT4B (ENSCJAG00000010124) LTC4S (ENSCJAG00000010116) MAML1 (ENSCJAG00000048349) CANX (ENSCJAG00000009989) ENSCJAG00000009931 RUFY1 (ENSCJAG00000009844) CNOT6 (ENSCJAG00000009795) ENSCJAG00000043414 SCGB3A1 (ENSCJAG00000009787) FLT4 (ENSCJAG00000009696) ADAMTS2 (ENSCJAG00000018919) ZNF354C (ENSCJAG00000086065) ZNF879 (ENSCJAG00000018904) GRM6 (ENSCJAG00000018865) ##22 ZNF454 (ENSCJAG00000018857) ZNF354B (ENSCJAG00000018848) MGAT1 (ENSCJAG00000046208) ZFP62 (ENSCJAG00000018839) BTNL9 (ENSCJAG00000018803) RACK1 (ENSCJAG00000018752) TRIM41 (ENSCJAG00000018733) TRIM7 (ENSCJAG00000018704) ENSCJAG00000066969 PPP2CA (ENSCJAG00000045966) ENSCJAG00000067181 TCF7 (ENSCJAG00000013603) ENSCJAG00000013556 C5orf15 (ENSCJAG00000013543) FSTL4 (ENSCJAG00000013506) Mas night monkey MODERN SPECIES 911 LTC4S (ENSANAG00000024498) MAML1 (ENSANAG00000037400) CANX (ENSANAG00000025740) CBY3 (ENSANAG00000024701) HNRNPH1 (ENSANAG00000035312) RUFY1 (ENSANAG00000031581) ENSANAG00000030413 ENSANAG00000028928 ENSANAG00000013483 CNOT6 (ENSANAG00000030436) SCGB3A1 (ENSANAG00000025025) FLT4 (ENSANAG00000030669) ENSANAG00000027694 ADAMTS2 (ENSANAG00000032180) ZNF354C (ENSANAG00000021816) GRM6 (ENSANAG00000032011) ##22 ZNF454 (ENSANAG00000037002) ZFP2 (ENSANAG00000019541) ENSANAG00000035849 ZNF354B (ENSANAG00000028556) TRIM7 (ENSANAG00000022519) TRIM41 (ENSANAG00000024834) RACK1 (ENSANAG00000026722) BTNL9 (ENSANAG00000024022) ZFP62 (ENSANAG00000019588) MGAT1 (ENSANAG00000014373) DNAAF5 (ENSANAG00000036684) PRKAR1B (ENSANAG00000033552) PDGFA (ENSANAG00000034259) Catarrhini ANCESTRAL SPECIES 7 ENSGT00390000002781 ENSGT00940000174020 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00950000183043.b.b ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.eb ENSGT00550000074939 Hominoidea ANCESTRAL SPECIES 8 ENSGT00390000002781 ENSGT00940000174020 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00950000183043.b.b ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000162292 Hominidae ANCESTRAL SPECIES 7 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00950000183043.b.b.m.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000162292 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00950000183043.b.b.m.a ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000162292 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00950000183043.b.b.m.a ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000162292 Pan ANCESTRAL SPECIES 10 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00950000183043.b.b.m.a ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000167867 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a Bonobo MODERN SPECIES 18 MRNIP (ENSPPAG00000037015) SQSTM1 (ENSPPAG00000034309) MGAT4B (ENSPPAG00000033457) ENSPPAG00000041541 MAML1 (ENSPPAG00000005302) ENSPPAG00000034104 CANX (ENSPPAG00000034073) ENSPPAG00000030033 CBY3 (ENSPPAG00000043106) ENSPPAG00000038325 RUFY1 (ENSPPAG00000029293) ENSPPAG00000039363 ADAMTS2 (ENSPPAG00000026778) ZNF354C (ENSPPAG00000041850) ZNF879 (ENSPPAG00000030668) GRM6 (ENSPPAG00000036885) ##22 ZNF454 (ENSPPAG00000038343) ZFP2 (ENSPPAG00000015238) ENSPPAG00000031584 ZNF354B (ENSPPAG00000027268) ENSPPAG00000038338 ZNF354A (ENSPPAG00000039371) CLK4 (ENSPPAG00000037779) COL23A1 (ENSPPAG00000041470) PHYKPL (ENSPPAG00000038615) ENSPPAG00000037536 GMCL2 (ENSPPAG00000034995) NHP2 (ENSPPAG00000028668) RMND5B (ENSPPAG00000035022) N4BP3 (ENSPPAG00000023810) B4GALT7 (ENSPPAG00000043542) Chimpanzee MODERN SPECIES 18 SQSTM1 (ENSPTRG00000017626) MGAT4B (ENSPTRG00000017625) LTC4S (ENSPTRG00000017624) MAML1 (ENSPTRG00000033932) ENSPTRG00000045963 CANX (ENSPTRG00000017621) ENSPTRG00000051338 CBY3 (ENSPTRG00000052485) ENSPTRG00000045474 ENSPTRG00000051626 RUFY1 (ENSPTRG00000017616) ENSPTRG00000028474 ADAMTS2 (ENSPTRG00000017614) ZNF354C (ENSPTRG00000045846) ZNF879 (ENSPTRG00000041282) GRM6 (ENSPTRG00000017612) ##22 ZNF454 (ENSPTRG00000017611) ZFP2 (ENSPTRG00000023199) ENSPTRG00000045160 ENSPTRG00000043704 ENSPTRG00000045467 ZNF354B (ENSPTRG00000017609) ENSPTRG00000049669 ZNF354A (ENSPTRG00000017606) CLK4 (ENSPTRG00000017605) COL23A1 (ENSPTRG00000017603) PHYKPL (ENSPTRG00000048247) HNRNPAB (ENSPTRG00000017601) NHP2 (ENSPTRG00000048185) RMND5B (ENSPTRG00000017598) N4BP3 (ENSPTRG00000017597) Human MODERN SPECIES 17 RASGEF1C (ENSG00000146090) RNF130 (ENSG00000113269) TBC1D9B (ENSG00000197226) MRNIP (ENSG00000161010) SQSTM1 (ENSG00000161011) MGAT4B (ENSG00000161013) LTC4S (ENSG00000213316) MAML1 (ENSG00000161021) CANX (ENSG00000127022) CBY3 (ENSG00000204659) HNRNPH1 (ENSG00000169045) RUFY1 (ENSG00000176783) ADAMTS2 (ENSG00000087116) ZNF354C (ENSG00000177932) ZNF879 (ENSG00000234284) GRM6 (ENSG00000113262) ##22 ZNF454 (ENSG00000178187) ZFP2 (ENSG00000198939) ZNF354B (ENSG00000178338) ZNF354A (ENSG00000169131) MSANTD5 (ENSG00000285891) CLK4 (ENSG00000113240) COL23A1 (ENSG00000050767) PHYKPL (ENSG00000175309) HNRNPAB (ENSG00000197451) GMCL2 (ENSG00000244234) NHP2 (ENSG00000145912) RMND5B (ENSG00000145916) N4BP3 (ENSG00000145911) PROP1 (ENSG00000175325) FAM153A (ENSG00000170074) Gorilla MODERN SPECIES 18 MRNIP (ENSGGOG00000014962) SQSTM1 (ENSGGOG00000026960) MGAT4B (ENSGGOG00000024066) LTC4S (ENSGGOG00000027355) MAML1 (ENSGGOG00000028537) ENSGGOG00000040537 ENSGGOG00000026945 CANX (ENSGGOG00000008450) CBY3 (ENSGGOG00000012023) HNRNPH1 (ENSGGOG00000025844) ENSGGOG00000003557 ENSGGOG00000014985 ADAMTS2 (ENSGGOG00000000816) ZNF354C (ENSGGOG00000014245) ZNF879 (ENSGGOG00000023048) GRM6 (ENSGGOG00000011993) ##22 ZNF454 (ENSGGOG00000022508) ZFP2 (ENSGGOG00000037928) ENSGGOG00000044077 ENSGGOG00000043873 ZNF354B (ENSGGOG00000000628) ENSGGOG00000028413 ZNF354A (ENSGGOG00000002534) CLK4 (ENSGGOG00000014248) ENSGGOG00000036374 COL23A1 (ENSGGOG00000006904) PHYKPL (ENSGGOG00000012916) HNRNPAB (ENSGGOG00000011692) GMCL2 (ENSGGOG00000023455) ENSGGOG00000000015 RMND5B (ENSGGOG00000000014) Orangutan MODERN SPECIES 18 MRNIP (ENSPPYG00000016131) SQSTM1 (ENSPPYG00000016130) MGAT4B (ENSPPYG00000016129) LTC4S (ENSPPYG00000016128) MAML1 (ENSPPYG00000016127) CBY3 (ENSPPYG00000016124) CANX (ENSPPYG00000016126) ENSPPYG00000031721 ENSPPYG00000016121 ENSPPYG00000040835 RUFY1 (ENSPPYG00000016120) ENSPPYG00000035848 ADAMTS2 (ENSPPYG00000016118) ZNF354C (ENSPPYG00000016117) ZNF879 (ENSPPYG00000029650) GRM6 (ENSPPYG00000016116) ##22 ZNF454 (ENSPPYG00000041561) ZFP2 (ENSPPYG00000016115) ZNF354B (ENSPPYG00000016113) ENSPPYG00000016112 ZNF354A (ENSPPYG00000016111) MSANTD5 (ENSPPYG00000036366) CLK4 (ENSPPYG00000016110) COL23A1 (ENSPPYG00000016109) PHYKPL (ENSPPYG00000016108) HNRNPAB (ENSPPYG00000016107) GMCL2 (ENSPPYG00000016106) NHP2 (ENSPPYG00000038546) RMND5B (ENSPPYG00000016104) N4BP3 (ENSPPYG00000016103) PROP1 (ENSPPYG00000016101) Gibbon MODERN SPECIES 11 TBC1D9B (ENSNLEG00000001836) MRNIP (ENSNLEG00000001806) ENSNLEG00000001801 ENSNLEG00000033839 MGAT4B (ENSNLEG00000001699) ENSNLEG00000001697 MAML1 (ENSNLEG00000001678) CANX (ENSNLEG00000001508) ENSNLEG00000035116 CBY3 (ENSNLEG00000001503) ENSNLEG00000026658 RUFY1 (ENSNLEG00000001488) ENSNLEG00000001449 ZNF354C (ENSNLEG00000001445) ZNF879 (ENSNLEG00000001439) GRM6 (ENSNLEG00000001434) ##22 ZNF454 (ENSNLEG00000001430) ZFP2 (ENSNLEG00000001415) ENSNLEG00000001427 ENSNLEG00000031458 ZNF354B (ENSNLEG00000001411) CLK4 (ENSNLEG00000015794) ENSNLEG00000015781 ENSNLEG00000015775 NHP2 (ENSNLEG00000015765) RMND5B (ENSNLEG00000015737) N4BP3 (ENSNLEG00000015729) PROP1 (ENSNLEG00000015712) ENSNLEG00000035226 ENSNLEG00000031386 ENSNLEG00000027902 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000174020 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00950000183043.b.b ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.eb ENSGT00550000074939 Rhinopithecus ANCESTRAL SPECIES 464 ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000161487 Golden snub-nosed monkey MODERN SPECIES 2239 TBC1D9B (ENSRROG00000043130) MRNIP (ENSRROG00000030855) SQSTM1 (ENSRROG00000036129) MGAT4B (ENSRROG00000038612) LTC4S (ENSRROG00000033957) MAML1 (ENSRROG00000039755) CANX (ENSRROG00000034381) CBY3 (ENSRROG00000034035) ENSRROG00000036327 ENSRROG00000027548 ENSRROG00000035613 RUFY1 (ENSRROG00000041055) ADAMTS2 (ENSRROG00000041064) ZNF354C (ENSRROG00000039027) ZNF879 (ENSRROG00000030257) GRM6 (ENSRROG00000044108) ##22 ZNF454 (ENSRROG00000029318) ZFP2 (ENSRROG00000038496) ENSRROG00000045092 ENSRROG00000021202 ZNF354B (ENSRROG00000029239) ZNF354A (ENSRROG00000035557) ENSRROG00000041069 Black snub-nosed monkey MODERN SPECIES 102 ENSRBIG00000028319 ENSRBIG00000031870 RUFY1 (ENSRBIG00000027921) ADAMTS2 (ENSRBIG00000025864) ZNF879 (ENSRBIG00000043646) GRM6 (ENSRBIG00000029280) ##22 ZNF454 (ENSRBIG00000035621) ZFP2 (ENSRBIG00000037934) ENSRBIG00000034197 ENSRBIG00000018735 ZNF354B (ENSRBIG00000031331) ZNF354A (ENSRBIG00000033996) Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00950000183043.b.b ENSGT00950000183043.b.a.g.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.eb ENSGT00550000074939 Vervet Monkey MODERN SPECIES 15 RNF130 (ENSCSAG00000008295) TBC1D9B (ENSCSAG00000008307) MRNIP (ENSCSAG00000008324) SQSTM1 (ENSCSAG00000008334) MGAT4B (ENSCSAG00000008346) LTC4S (ENSCSAG00000008363) MAML1 (ENSCSAG00000008369) CANX (ENSCSAG00000008385) CBY3 (ENSCSAG00000008395) ENSCSAG00000008405 HNRNPH1 (ENSCSAG00000008415) RUFY1 (ENSCSAG00000008458) ADAMTS2 (ENSCSAG00000008473) ZNF354C (ENSCSAG00000008484) ZNF879 (ENSCSAG00000008491) GRM6 (ENSCSAG00000008547) ##22 ZNF454 (ENSCSAG00000008562) ZFP2 (ENSCSAG00000008564) ZNF354B (ENSCSAG00000008583) ZNF354A (ENSCSAG00000008589) CLK4 (ENSCSAG00000008600) PHYKPL (ENSCSAG00000008619) ENSCSAG00000008658 NHP2 (ENSCSAG00000008690) RMND5B (ENSCSAG00000008697) N4BP3 (ENSCSAG00000008702) PROP1 (ENSCSAG00000008706) B4GALT7 (ENSCSAG00000008715) TMED9 (ENSCSAG00000008720) FAM193B (ENSCSAG00000008728) DDX41 (ENSCSAG00000008742) Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00390000002781 ENSGT00940000174020 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.db.b ENSGT00550000074939 Macaca ANCESTRAL SPECIES 7 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236180 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000162292 ENSGT00940000157712 Rhesus MODERN SPECIES 16 RNF130 (ENSMMUG00000013347) TBC1D9B (ENSMMUG00000021057) MRNIP (ENSMMUG00000021056) SQSTM1 (ENSMMUG00000021055) MGAT4B (ENSMMUG00000012374) LTC4S (ENSMMUG00000012373) MAML1 (ENSMMUG00000012371) ENSMMUG00000050372 CANX (ENSMMUG00000012370) ENSMMUG00000058524 CBY3 (ENSMMUG00000043680) ENSMMUG00000063082 HNRNPH1 (ENSMMUG00000010843) RUFY1 (ENSMMUG00000018666) ADAMTS2 (ENSMMUG00000002488) GRM6 (ENSMMUG00000017587) ##22 ZNF354C (ENSMMUG00000002485) ZFP2 (ENSMMUG00000008978) ZNF354B (ENSMMUG00000008976) ZNF354A (ENSMMUG00000041519) MSANTD5 (ENSMMUG00000050539) CLK4 (ENSMMUG00000004002) COL23A1 (ENSMMUG00000004000) PHYKPL (ENSMMUG00000003997) HNRNPAB (ENSMMUG00000003996) GMCL2 (ENSMMUG00000008440) NHP2 (ENSMMUG00000018757) RMND5B (ENSMMUG00000018758) N4BP3 (ENSMMUG00000017607) PROP1 (ENSMMUG00000057777) B4GALT7 (ENSMMUG00000029662) Crab-eating macaque MODERN SPECIES 16 RNF130 (ENSMFAG00000019863) TBC1D9B (ENSMFAG00000000062) MRNIP (ENSMFAG00000040511) SQSTM1 (ENSMFAG00000032992) MGAT4B (ENSMFAG00000029205) ENSMFAG00000043066 MAML1 (ENSMFAG00000044212) CBY3 (ENSMFAG00000042944) CANX (ENSMFAG00000031934) ENSMFAG00000033075 HNRNPH1 (ENSMFAG00000028267) RUFY1 (ENSMFAG00000033376) ADAMTS2 (ENSMFAG00000002799) ZNF879 (ENSMFAG00000039136) ENSMFAG00000050028 GRM6 (ENSMFAG00000002639) ##22 ZNF454 (ENSMFAG00000043337) ZFP2 (ENSMFAG00000014508) ZNF354B (ENSMFAG00000029623) ZNF354A (ENSMFAG00000013407) MSANTD5 (ENSMFAG00000055801) CLK4 (ENSMFAG00000040140) ENSMFAG00000062651 COL23A1 (ENSMFAG00000040567) PHYKPL (ENSMFAG00000004010) ENSMFAG00000035188 GMCL2 (ENSMFAG00000018167) NHP2 (ENSMFAG00000032376) RMND5B (ENSMFAG00000044663) N4BP3 (ENSMFAG00000060893) PROP1 (ENSMFAG00000048111) Pig-tailed macaque MODERN SPECIES 591 SQSTM1 (ENSMNEG00000021850) MGAT4B (ENSMNEG00000042915) LTC4S (ENSMNEG00000042676) MAML1 (ENSMNEG00000031843) ENSMNEG00000020821 CANX (ENSMNEG00000038823) ENSMNEG00000033462 ENSMNEG00000004160 CBY3 (ENSMNEG00000037134) ENSMNEG00000044166 HNRNPH1 (ENSMNEG00000032375) RUFY1 (ENSMNEG00000036092) ADAMTS2 (ENSMNEG00000032393) ZNF354C (ENSMNEG00000034678) ZNF879 (ENSMNEG00000030724) GRM6 (ENSMNEG00000044389) ##22 ZNF454 (ENSMNEG00000002699) ZFP2 (ENSMNEG00000038326) ENSMNEG00000041417 ENSMNEG00000026073 ZNF354B (ENSMNEG00000031489) ENSMNEG00000043660 ZNF354A (ENSMNEG00000036763) CLK4 (ENSMNEG00000030273) COL23A1 (ENSMNEG00000036213) PHYKPL (ENSMNEG00000032543) HNRNPAB (ENSMNEG00000044677) NHP2 (ENSMNEG00000038787) RMND5B (ENSMNEG00000030718) N4BP3 (ENSMNEG00000038139) PROP1 (ENSMNEG00000013479) Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000174020 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.db.b ENSGT00550000074939 Olive baboon MODERN SPECIES 15 TBC1D9B (ENSPANG00000003016) MRNIP (ENSPANG00000002750) SQSTM1 (ENSPANG00000012011) ENSPANG00000038696 MGAT4B (ENSPANG00000009339) ENSPANG00000044272 MAML1 (ENSPANG00000009297) CANX (ENSPANG00000013567) CBY3 (ENSPANG00000012012) HNRNPH1 (ENSPANG00000013058) RUFY1 (ENSPANG00000019170) ENSPANG00000040974 ENSPANG00000049297 ADAMTS2 (ENSPANG00000005312) ZNF879 (ENSPANG00000032345) GRM6 (ENSPANG00000006031) ##22 ZNF454 (ENSPANG00000009509) ZNF354B (ENSPANG00000002751) ZNF354A (ENSPANG00000032762) MSANTD5 (ENSPANG00000042990) CLK4 (ENSPANG00000014774) COL23A1 (ENSPANG00000006848) PHYKPL (ENSPANG00000016441) HNRNPAB (ENSPANG00000014427) GMCL2 (ENSPANG00000009340) ENSPANG00000038618 NHP2 (ENSPANG00000019121) RMND5B (ENSPANG00000011466) N4BP3 (ENSPANG00000022950) ENSPANG00000037764 PROP1 (ENSPANG00000031959) Cercopithecinae_d ANCESTRAL SPECIES 115 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00940000153137.a.b.a ENSGT00940000166214 ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000154944.e.b ENSGT00910000147061 ENSGT00940000162570 ENSGT00940000156044.u.b ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735.db.a ENSGT00940000156185.l ENSGT00940000154735.db.b ENSGT00550000074939 ENSGT00940000153203.A.a Sooty mangabey MODERN SPECIES 157 MRNIP (ENSCATG00000038409) SQSTM1 (ENSCATG00000034356) LTC4S (ENSCATG00000029442) MGAT4B (ENSCATG00000021105) MAML1 (ENSCATG00000035850) CANX (ENSCATG00000024926) ENSCATG00000030870 CBY3 (ENSCATG00000038136) ENSCATG00000039249 ENSCATG00000037633 HNRNPH1 (ENSCATG00000034747) RUFY1 (ENSCATG00000012248) ADAMTS2 (ENSCATG00000024805) ZNF354C (ENSCATG00000039049) ZNF879 (ENSCATG00000029400) GRM6 (ENSCATG00000042346) ##22 ZNF454 (ENSCATG00000031926) ZFP2 (ENSCATG00000029817) ENSCATG00000025765 ENSCATG00000020646 ZNF354B (ENSCATG00000040064) ZNF354A (ENSCATG00000029919) CLK4 (ENSCATG00000031741) COL23A1 (ENSCATG00000009862) PHYKPL (ENSCATG00000035427) HNRNPAB (ENSCATG00000032328) GMCL2 (ENSCATG00000021212) NHP2 (ENSCATG00000043608) RMND5B (ENSCATG00000036305) N4BP3 (ENSCATG00000034047) PROP1 (ENSCATG00000033045) Drill MODERN SPECIES 603 RNF130 (ENSMLEG00000044175) TBC1D9B (ENSMLEG00000029660) MRNIP (ENSMLEG00000041022) SQSTM1 (ENSMLEG00000037546) MGAT4B (ENSMLEG00000030238) LTC4S (ENSMLEG00000039124) MAML1 (ENSMLEG00000033787) CANX (ENSMLEG00000041092) CBY3 (ENSMLEG00000028373) ENSMLEG00000027731 ENSMLEG00000040142 RUFY1 (ENSMLEG00000042265) ADAMTS2 (ENSMLEG00000037514) ZNF354C (ENSMLEG00000029929) ZNF879 (ENSMLEG00000044457) GRM6 (ENSMLEG00000031526) ##22 ZNF454 (ENSMLEG00000039955) ZFP2 (ENSMLEG00000014884) ENSMLEG00000003410 ZNF354B (ENSMLEG00000037960) ENSMLEG00000043968 ZNF354A (ENSMLEG00000038806) Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Tree shrew MODERN SPECIES 4172 ENSTBEG00000000353 ##22 ZNF454 (ENSTBEG00000000346) Glires ANCESTRAL SPECIES 7 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Lagomorpha ANCESTRAL SPECIES 341 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 Rabbit MODERN SPECIES 463 ENSOCUG00000030900 ENSOCUG00000016395 GRM6 (ENSOCUG00000001989) ##22 ZNF454 (ENSOCUG00000029119) ZFP2 (ENSOCUG00000029226) ZNF354B (ENSOCUG00000029238) PROP1 (ENSOCUG00000027555) ENSOCUG00000024408 ZNF354C (ENSOCUG00000035837) ADAMTS2 (ENSOCUG00000001035) RUFY1 (ENSOCUG00000002518) HNRNPH1 (ENSOCUG00000017150) ENSOCUG00000022535 CANX (ENSOCUG00000015091) MGAT4B (ENSOCUG00000008822) ENSOCUG00000021533 SQSTM1 (ENSOCUG00000015445) MRNIP (ENSOCUG00000015452) Pika MODERN SPECIES 3706 ENSOPRG00000009040 ##22 ENSOPRG00000009035 Rodentia ANCESTRAL SPECIES 7 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000182924.B.a.b Myomorpha ANCESTRAL SPECIES 28 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000182924.B.a.b Muroidea ANCESTRAL SPECIES 10 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.a.b.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Cricetidae ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.a.b.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Cricetinae ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.a.b.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 Chinese hamster chok1gshd MODERN SPECIES 229 Tbc1d9b (ENSCGRG00001020092) Mrnip (ENSCGRG00001004426) Sqstm1 (ENSCGRG00001009697) ENSCGRG00001010734 Mgat4b (ENSCGRG00001006474) ENSCGRG00001013494 Maml1 (ENSCGRG00001016447) Canx (ENSCGRG00001017710) Cby3 (ENSCGRG00001009348) Hnrnph1 (ENSCGRG00001013538) Rufy1 (ENSCGRG00001013990) ENSCGRG00001015852 Adamts2 (ENSCGRG00001017939) Zfp354c (ENSCGRG00001011620) Zfp879 (ENSCGRG00001013407) Grm6 (ENSCGRG00001015589) ##22 Zfp454 (ENSCGRG00001013939) Zfp354b (ENSCGRG00001006089) Zfp2 (ENSCGRG00001006658) Prop1 (ENSCGRG00001004549) Or1ad6 (ENSCGRG00001007584) Or1ad1 (ENSCGRG00001005982) ENSCGRG00001005203 Or1ad8 (ENSCGRG00001006382) ENSCGRG00001005395 Zfp354a (ENSCGRG00001021088) Clk4 (ENSCGRG00001016893) Col23a1 (ENSCGRG00001019776) Phykpl (ENSCGRG00001023817) Hnrnpab (ENSCGRG00001005044) Nhp2 (ENSCGRG00001005326) Golden Hamster MODERN SPECIES 647 Rasgef1c (ENSMAUG00000017005) Rnf130 (ENSMAUG00000015405) Tbc1d9b (ENSMAUG00000014065) Mrnip (ENSMAUG00000016042) Sqstm1 (ENSMAUG00000014382) Mgat4b (ENSMAUG00000000092) ENSMAUG00000004203 Maml1 (ENSMAUG00000011048) Canx (ENSMAUG00000007570) ENSMAUG00000005355 Hnrnph1 (ENSMAUG00000012959) Rufy1 (ENSMAUG00000010229) Adamts2 (ENSMAUG00000000258) Zfp354c (ENSMAUG00000001171) Zfp879 (ENSMAUG00000000179) Grm6 (ENSMAUG00000017668) ##22 Zfp454 (ENSMAUG00000013415) Zfp2 (ENSMAUG00000006975) Zfp354b (ENSMAUG00000000163) Prop1 (ENSMAUG00000013991) Zfp354a (ENSMAUG00000000735) Clk4 (ENSMAUG00000006824) ENSMAUG00000008965 Rmnd5b (ENSMAUG00000015256) N4bp3 (ENSMAUG00000012606) Sec24a (ENSMAUG00000016468) Sar1b (ENSMAUG00000014677) Jade2 (ENSMAUG00000010462) ENSMAUG00000018340 Nfat5 (ENSMAUG00000014930) Nqo1 (ENSMAUG00000008644) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000161487 ENSGT00840000130327 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000164277 Prairie vole MODERN SPECIES 15 Rnf130 (ENSMOCG00000022727) Tbc1d9b (ENSMOCG00000017854) Mrnip (ENSMOCG00000014732) ENSMOCG00000019043 ENSMOCG00000002756 Mgat4b (ENSMOCG00000010677) ENSMOCG00000021052 Maml1 (ENSMOCG00000001181) Canx (ENSMOCG00000011838) ENSMOCG00000011359 Hnrnph1 (ENSMOCG00000020579) Rufy1 (ENSMOCG00000003244) Adamts2 (ENSMOCG00000022331) Zfp354c (ENSMOCG00000022297) Zfp879 (ENSMOCG00000020947) Grm6 (ENSMOCG00000018877) ##22 Zfp454 (ENSMOCG00000020470) Zfp2 (ENSMOCG00000022747) Zfp354b (ENSMOCG00000019941) Prop1 (ENSMOCG00000021712) Zfp354a (ENSMOCG00000003692) ENSMOCG00000002350 Clk4 (ENSMOCG00000022044) Col23a1 (ENSMOCG00000019880) Phykpl (ENSMOCG00000016904) Hnrnpab (ENSMOCG00000014470) Nhp2 (ENSMOCG00000022171) Rmnd5b (ENSMOCG00000020378) N4bp3 (ENSMOCG00000020990) 0610009B22Rik (ENSMOCG00000020890) Sec24a (ENSMOCG00000019735) Northern American deer mouse MODERN SPECIES 21 Rasgef1c (ENSPEMG00000018905) Rnf130 (ENSPEMG00000016730) Tbc1d9b (ENSPEMG00000013746) Mrnip (ENSPEMG00000018478) Sqstm1 (ENSPEMG00000019274) Mgat4b (ENSPEMG00000014635) Ltc4s (ENSPEMG00000027708) Maml1 (ENSPEMG00000019224) Canx (ENSPEMG00000005531) ENSPEMG00000017877 Hnrnph1 (ENSPEMG00000018866) Rufy1 (ENSPEMG00000009753) Adamts2 (ENSPEMG00000018873) Zfp354c (ENSPEMG00000014426) Zfp879 (ENSPEMG00000010770) Grm6 (ENSPEMG00000012676) ##22 Zfp454 (ENSPEMG00000009308) Zfp2 (ENSPEMG00000030164) Zfp354b (ENSPEMG00000001281) Prop1 (ENSPEMG00000002087) Or1ad6 (ENSPEMG00000029264) ENSPEMG00000026849 ENSPEMG00000025212 Or1ad8 (ENSPEMG00000030226) ENSPEMG00000028922 ENSPEMG00000024167 ENSPEMG00000024434 ENSPEMG00000028065 Clk4 (ENSPEMG00000009386) Col23a1 (ENSPEMG00000023483) Phykpl (ENSPEMG00000021956) Murinae ANCESTRAL SPECIES 7 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.a.b.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327.a.a ENSGT00840000130327.a.b ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 Mus ANCESTRAL SPECIES 2 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327.a.a ENSGT00840000130327.a.b ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00900000143680 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00860000136315 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327.a.a ENSGT00840000130327.a.b ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00900000143680 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00860000136315 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327.a.a ENSGT00840000130327.a.b ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 Mouse MODERN SPECIES 2 Rasgef1c (ENSMUSG00000020374) Rnf130 (ENSMUSG00000020376) Tbc1d9b (ENSMUSG00000036644) Mrnip (ENSMUSG00000020381) Sqstm1 (ENSMUSG00000015837) Mgat4b (ENSMUSG00000036620) Ltc4s (ENSMUSG00000020377) Maml1 (ENSMUSG00000050567) Canx (ENSMUSG00000020368) Cby3 (ENSMUSG00000050087) Hnrnph1 (ENSMUSG00000007850) Rufy1 (ENSMUSG00000020375) Adamts2 (ENSMUSG00000036545) Zfp354c (ENSMUSG00000044807) Zfp879 (ENSMUSG00000044296) Grm6 (ENSMUSG00000000617) ##22 Zfp454 (ENSMUSG00000048728) Zfp2 (ENSMUSG00000049321) Zfp354b (ENSMUSG00000020335) 4933414I15Rik (ENSMUSG00000072983) Prop1 (ENSMUSG00000044542) Or1ad6 (ENSMUSG00000050343) Or1ad1 (ENSMUSG00000061952) Or1ad8 (ENSMUSG00000060918) Or1x2 (ENSMUSG00000059397) Or1x6 (ENSMUSG00000057890) Zfp354a (ENSMUSG00000020364) Msantd5 (ENSMUSG00000061469) BC049762 (ENSMUSG00000045942) Clk4 (ENSMUSG00000020385) Col23a1 (ENSMUSG00000063564) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00900000143680 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00860000136315 ENSGT00940000162292 ENSGT00940000162330.j ENSGT00940000162330.i.a.a ENSGT00940000162330.i.b ENSGT00940000164840 ENSGT00940000161487 ENSGT00840000130327.a.b ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 spretus MODERN SPECIES 2 Rasgef1c (MGP_SPRETEiJ_G0017125) Rnf130 (MGP_SPRETEiJ_G0017126) Tbc1d9b (MGP_SPRETEiJ_G0017127) Mrnip (MGP_SPRETEiJ_G0017128) Sqstm1 (MGP_SPRETEiJ_G0017129) Mgat4b (MGP_SPRETEiJ_G0017130) Ltc4s (MGP_SPRETEiJ_G0017131) Maml1 (MGP_SPRETEiJ_G0017132) Canx (MGP_SPRETEiJ_G0017133) MGP_SPRETEiJ_G0017134 MGP_SPRETEiJ_G0017135 Rufy1 (MGP_SPRETEiJ_G0017136) Adamts2 (MGP_SPRETEiJ_G0017137) Zfp354c (MGP_SPRETEiJ_G0017138) Zfp879 (MGP_SPRETEiJ_G0017139) Grm6 (MGP_SPRETEiJ_G0017140) ##22 Zfp454 (MGP_SPRETEiJ_G0017141) Zfp2 (MGP_SPRETEiJ_G0017142) Zfp354b (MGP_SPRETEiJ_G0017143) 4933414I15Rik (MGP_SPRETEiJ_G0017144) Prop1 (MGP_SPRETEiJ_G0017145) Or1ad6 (MGP_SPRETEiJ_G0017146) Or1ad1 (MGP_SPRETEiJ_G0017147) Or1ad8 (MGP_SPRETEiJ_G0017148) MGP_SPRETEiJ_G0017149 MGP_SPRETEiJ_G0017150 MGP_SPRETEiJ_G0017151 Clk4 (MGP_SPRETEiJ_G0017152) Col23a1 (MGP_SPRETEiJ_G0017153) Phykpl (MGP_SPRETEiJ_G0017154) Hnrnpab (MGP_SPRETEiJ_G0017155) Steppe mouse MODERN SPECIES 2758 Mrnip (ENSMSIG00000009547) Sqstm1 (ENSMSIG00000009550) Mgat4b (ENSMSIG00000009625) Ltc4s (ENSMSIG00000009669) Maml1 (ENSMSIG00000009693) Canx (ENSMSIG00000009706) ENSMSIG00000009741 Hnrnph1 (ENSMSIG00000009749) Rufy1 (ENSMSIG00000009787) Adamts2 (ENSMSIG00000009833) Zfp354c (ENSMSIG00000009873) Zfp879 (ENSMSIG00000009906) Grm6 (ENSMSIG00000009979) ##22 Zfp454 (ENSMSIG00000010013) Zfp2 (ENSMSIG00000010031) Zfp354b (ENSMSIG00000010046) 4933414I15Rik (ENSMSIG00000010069) Prop1 (ENSMSIG00000010077) Or1ad6 (ENSMSIG00000010084) Or1ad1 (ENSMSIG00000010102) Ryukyu mouse MODERN SPECIES 2 Rnf130 (MGP_CAROLIEiJ_G0016281) Tbc1d9b (MGP_CAROLIEiJ_G0016282) Mrnip (MGP_CAROLIEiJ_G0016283) Sqstm1 (MGP_CAROLIEiJ_G0016284) Mgat4b (MGP_CAROLIEiJ_G0016285) Ltc4s (MGP_CAROLIEiJ_G0016286) Maml1 (MGP_CAROLIEiJ_G0016287) Canx (MGP_CAROLIEiJ_G0016288) MGP_CAROLIEiJ_G0016289 MGP_CAROLIEiJ_G0016290 MGP_CAROLIEiJ_G0016291 Rufy1 (MGP_CAROLIEiJ_G0016292) Adamts2 (MGP_CAROLIEiJ_G0016293) Zfp354c (MGP_CAROLIEiJ_G0016294) Zfp879 (MGP_CAROLIEiJ_G0016295) Grm6 (MGP_CAROLIEiJ_G0016296) ##22 Zfp454 (MGP_CAROLIEiJ_G0016297) Zfp2 (MGP_CAROLIEiJ_G0016298) Zfp354b (MGP_CAROLIEiJ_G0016299) 4933414I15Rik (MGP_CAROLIEiJ_G0016300) Prop1 (MGP_CAROLIEiJ_G0016301) Or1ad6 (MGP_CAROLIEiJ_G0016302) MGP_CAROLIEiJ_G0016303 Or1ad8 (MGP_CAROLIEiJ_G0016304) MGP_CAROLIEiJ_G0016305 Zfp354a (MGP_CAROLIEiJ_G0016306) MGP_CAROLIEiJ_G0016307 Clk4 (MGP_CAROLIEiJ_G0016308) Col23a1 (MGP_CAROLIEiJ_G0016309) Phykpl (MGP_CAROLIEiJ_G0016310) Hnrnpab (MGP_CAROLIEiJ_G0016311) Shrew mouse MODERN SPECIES 5 Rasgef1c (MGP_PahariEiJ_G0017416) Rnf130 (MGP_PahariEiJ_G0017417) Tbc1d9b (MGP_PahariEiJ_G0017418) Mrnip (MGP_PahariEiJ_G0017419) Sqstm1 (MGP_PahariEiJ_G0017420) Mgat4b (MGP_PahariEiJ_G0017421) MGP_PahariEiJ_G0017422 Maml1 (MGP_PahariEiJ_G0017423) Canx (MGP_PahariEiJ_G0017424) Cby3 (MGP_PahariEiJ_G0017425) Hnrnph1 (MGP_PahariEiJ_G0017426) Rufy1 (MGP_PahariEiJ_G0017427) Adamts2 (MGP_PahariEiJ_G0017428) Zfp354c (MGP_PahariEiJ_G0017429) Zfp879 (MGP_PahariEiJ_G0017430) Grm6 (MGP_PahariEiJ_G0017431) ##22 Zfp454 (MGP_PahariEiJ_G0017432) Zfp2 (MGP_PahariEiJ_G0017433) Zfp354b (MGP_PahariEiJ_G0017434) Prop1 (MGP_PahariEiJ_G0017436) Or1ad6 (MGP_PahariEiJ_G0017437) Or1ad1 (MGP_PahariEiJ_G0017438) Or1ad8 (MGP_PahariEiJ_G0017439) MGP_PahariEiJ_G0017440 Zfp354a (MGP_PahariEiJ_G0017441) MGP_PahariEiJ_G0017442 Clk4 (MGP_PahariEiJ_G0017443) Col23a1 (MGP_PahariEiJ_G0017444) Phykpl (MGP_PahariEiJ_G0017445) Hnrnpab (MGP_PahariEiJ_G0017446) Nhp2 (MGP_PahariEiJ_G0017447) Rat MODERN SPECIES 1 Rasgef1c (ENSRNOG00000003005) Rnf130 (ENSRNOG00000046330) Tbc1d9b (ENSRNOG00000003050) Mrnip (ENSRNOG00000003068) Sqstm1 (ENSRNOG00000003147) Mgat4b (ENSRNOG00000003235) Ltc4s (ENSRNOG00000003244) Maml1 (ENSRNOG00000003268) Canx (ENSRNOG00000003343) Cby3 (ENSRNOG00000066223) Hnrnph1 (ENSRNOG00000003399) Rufy1 (ENSRNOG00000003536) Adamts2 (ENSRNOG00000061484) Zfp354c (ENSRNOG00000029205) Zfp879 (ENSRNOG00000030517) Grm6 (ENSRNOG00000000233) ##22 Znf454 (ENSRNOG00000029678) Zfp2 (ENSRNOG00000030750) ENSRNOG00000067059 Prop1 (ENSRNOG00000003671) Or1ad6 (ENSRNOG00000003668) Or1ad1 (ENSRNOG00000063756) Or1ad5 (ENSRNOG00000029930) Or1ad8 (ENSRNOG00000068382) AC128290.1 (ENSRNOG00000033559) Or1x2b (ENSRNOG00000070608) Or1x2 (ENSRNOG00000066417) Or1x2c (ENSRNOG00000064065) Or1x2d (ENSRNOG00000065571) Zfp354a (ENSRNOG00000003634) LOC120095094 (ENSRNOG00000058960) Upper Galilee mountains blind mole rat MODERN SPECIES 1624 Rnf130 (ENSNGAG00000000237) ENSNGAG00000013038 Tbc1d9b (ENSNGAG00000020655) Mrnip (ENSNGAG00000019013) Sqstm1 (ENSNGAG00000000111) Mgat4b (ENSNGAG00000011567) ENSNGAG00000019905 Maml1 (ENSNGAG00000007418) Canx (ENSNGAG00000009718) ENSNGAG00000019073 Hnrnph1 (ENSNGAG00000014666) Rufy1 (ENSNGAG00000014023) Adamts2 (ENSNGAG00000007774) Zfp354c (ENSNGAG00000013055) Zfp879 (ENSNGAG00000010850) Grm6 (ENSNGAG00000000051) ##22 Zfp454 (ENSNGAG00000001170) Zfp2 (ENSNGAG00000015033) Prop1 (ENSNGAG00000016946) Lesser Egyptian jerboa MODERN SPECIES 133 Hand1 (ENSJJAG00000023893) Sap30l (ENSJJAG00000024095) Galnt10 (ENSJJAG00000011786) Mfap3 (ENSJJAG00000011608) Fam114a2 (ENSJJAG00000018239) Gria1 (ENSJJAG00000011336) Nmur2 (ENSJJAG00000006251) ENSJJAG00000016616 Glra1 (ENSJJAG00000010424) G3bp1 (ENSJJAG00000017035) Zfp354c (ENSJJAG00000015911) Grm6 (ENSJJAG00000010828) ##22 Zfp454 (ENSJJAG00000005501) Zfp2 (ENSJJAG00000005258) Zfp354b (ENSJJAG00000018840) Prop1 (ENSJJAG00000018429) Zfp354a (ENSJJAG00000001494) Clk4 (ENSJJAG00000014522) Col23a1 (ENSJJAG00000020773) Phykpl (ENSJJAG00000014498) Hnrnpab (ENSJJAG00000022240) Nhp2 (ENSJJAG00000016469) Rmnd5b (ENSJJAG00000017175) N4bp3 (ENSJJAG00000023037) Sec24a (ENSJJAG00000021996) ENSJJAG00000000251 Jade2 (ENSJJAG00000014097) Kangaroo rat MODERN SPECIES 454 Mapk9 (ENSDORG00000003921) Rasgef1c (ENSDORG00000003918) Rnf130 (ENSDORG00000012990) Tbc1d9b (ENSDORG00000014854) Sqstm1 (ENSDORG00000014852) Mgat4b (ENSDORG00000007019) ENSDORG00000025410 Maml1 (ENSDORG00000023567) Canx (ENSDORG00000002108) ENSDORG00000024643 Hnrnph1 (ENSDORG00000005453) Rufy1 (ENSDORG00000005452) Adamts2 (ENSDORG00000015603) Zfp354c (ENSDORG00000015602) Zfp2 (ENSDORG00000005936) Grm6 (ENSDORG00000029560) ##22 Zfp454 (ENSDORG00000029196) Prop1 (ENSDORG00000009397) Zfp354a (ENSDORG00000009396) Clk4 (ENSDORG00000009760) ENSDORG00000024543 Col23a1 (ENSDORG00000011025) Phykpl (ENSDORG00000011023) Hnrnpab (ENSDORG00000011015) Nhp2 (ENSDORG00000003312) Rmnd5b (ENSDORG00000003311) N4bp3 (ENSDORG00000003310) Sec24a (ENSDORG00000007130) Sar1b (ENSDORG00000023516) Jade2 (ENSDORG00000001777) Cdkn2aipnl (ENSDORG00000023575) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000182924.B.a.b ENSGT00940000160154 Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000183007.a.b.g.a.b.b ENSGT00950000183007.a.b.g.a.a Hystricomorpha_a ANCESTRAL SPECIES 74 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000183007.a.b.g.a.b.b ENSGT00950000183007.a.b.g.b Long-tailed chinchilla MODERN SPECIES 115 CNOT6 (ENSCLAG00000010489) GFPT2 (ENSCLAG00000011097) MAPK9 (ENSCLAG00000011477) RASGEF1C (ENSCLAG00000010592) RNF130 (ENSCLAG00000012509) TBC1D9B (ENSCLAG00000010716) SQSTM1 (ENSCLAG00000014864) MGAT4B (ENSCLAG00000013986) MAML1 (ENSCLAG00000012443) CANX (ENSCLAG00000012635) HNRNPH1 (ENSCLAG00000013617) RUFY1 (ENSCLAG00000012650) ADAMTS2 (ENSCLAG00000012213) ZNF354C (ENSCLAG00000012651) ZNF879 (ENSCLAG00000013696) GRM6 (ENSCLAG00000015195) ##22 ENSCLAG00000010195 ENSCLAG00000010435 ZFP2 (ENSCLAG00000011174) ZNF354B (ENSCLAG00000013514) ENSCLAG00000017710 ENSCLAG00000010643 ZNF354A (ENSCLAG00000014648) CLK4 (ENSCLAG00000013604) COL23A1 (ENSCLAG00000011420) PHYKPL (ENSCLAG00000014481) HNRNPAB (ENSCLAG00000011022) NHP2 (ENSCLAG00000016005) RMND5B (ENSCLAG00000012053) N4BP3 (ENSCLAG00000013512) ENSCLAG00000011265 Degu MODERN SPECIES 70 ENSODEG00000006939 GFPT2 (ENSODEG00000007246) ENSODEG00000006074 RNF130 (ENSODEG00000006815) TBC1D9B (ENSODEG00000007268) SQSTM1 (ENSODEG00000007536) MGAT4B (ENSODEG00000006661) LTC4S (ENSODEG00000006956) MAML1 (ENSODEG00000007120) CANX (ENSODEG00000007247) ENSODEG00000007058 RUFY1 (ENSODEG00000006045) ADAMTS2 (ENSODEG00000010343) ZNF354C (ENSODEG00000007509) ZNF879 (ENSODEG00000007967) GRM6 (ENSODEG00000009985) ##22 ZNF454 (ENSODEG00000007335) ZNF354B (ENSODEG00000007968) PROP1 (ENSODEG00000007660) ENSODEG00000007859 ENSODEG00000006751 ZNF354A (ENSODEG00000008278) CLK4 (ENSODEG00000006750) ENSODEG00000007622 PHYKPL (ENSODEG00000008837) HNRNPAB (ENSODEG00000006830) NHP2 (ENSODEG00000006948) RMND5B (ENSODEG00000007077) N4BP3 (ENSODEG00000007406) SLC36A2 (ENSODEG00000006677) SLC36A3 (ENSODEG00000008013) Guinea pig MODERN SPECIES 176 RNF130 (ENSCPOG00000013821) ENSCPOG00000015076 TBC1D9B (ENSCPOG00000011294) SQSTM1 (ENSCPOG00000026534) MGAT4B (ENSCPOG00000005836) LTC4S (ENSCPOG00000021312) MAML1 (ENSCPOG00000009382) CANX (ENSCPOG00000003259) ENSCPOG00000001485 RUFY1 (ENSCPOG00000012088) ADAMTS2 (ENSCPOG00000001168) ZNF354C (ENSCPOG00000038581) ZNF879 (ENSCPOG00000040313) GRM6 (ENSCPOG00000001162) ##22 ENSCPOG00000035563 ENSCPOG00000033835 ZFP2 (ENSCPOG00000031347) ZNF354B (ENSCPOG00000002227) PROP1 (ENSCPOG00000020734) ENSCPOG00000025194 ENSCPOG00000037406 ZNF354A (ENSCPOG00000034791) CLK4 (ENSCPOG00000002898) ENSCPOG00000037852 PHYKPL (ENSCPOG00000012384) HNRNPAB (ENSCPOG00000025972) NHP2 (ENSCPOG00000033753) RMND5B (ENSCPOG00000031718) N4BP3 (ENSCPOG00000025006) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000016658 RNF130 (ENSHGLG00000019044) TBC1D9B (ENSHGLG00000014248) ENSHGLG00000034162 SQSTM1 (ENSHGLG00000012249) ENSHGLG00000010792 LTC4S (ENSHGLG00000008079) MAML1 (ENSHGLG00000007422) ENSHGLG00000014507 ENSHGLG00000014040 HNRNPH1 (ENSHGLG00000018565) RUFY1 (ENSHGLG00000017638) ADAMTS2 (ENSHGLG00000017531) ENSHGLG00000019454 ZNF879 (ENSHGLG00000013266) GRM6 (ENSHGLG00000013576) ##22 ZFP2 (ENSHGLG00000033138) ENSHGLG00000047455 ENSHGLG00000033241 ENSHGLG00000034750 ENSHGLG00000009648 ENSHGLG00000032445 ENSHGLG00000045105 ENSHGLG00000039978 ZNF354A (ENSHGLG00000005975) ENSHGLG00000013793 COL23A1 (ENSHGLG00000039641) PHYKPL (ENSHGLG00000018644) HNRNPAB (ENSHGLG00000014490) NHP2 (ENSHGLG00000043955) RMND5B (ENSHGLG00000032587) Sciuridae ANCESTRAL SPECIES 33 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT01030000236091 ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000182924.B.a.b ENSGT00940000160154 ENSGT00940000158570 Marmotini ANCESTRAL SPECIES 90 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000163610 ENSGT00940000162327 Marmotini_b ANCESTRAL SPECIES 162 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000153503.a.a ENSGT00940000158334 ENSGT00940000156647 ENSGT00940000162715 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000163610 ENSGT00940000162327 Squirrel MODERN SPECIES 339 RASGEF1C (ENSSTOG00000002744) RNF130 (ENSSTOG00000013681) TBC1D9B (ENSSTOG00000013665) ENSSTOG00000013660 SQSTM1 (ENSSTOG00000013654) MGAT4B (ENSSTOG00000015692) LTC4S (ENSSTOG00000028546) MAML1 (ENSSTOG00000013644) CANX (ENSSTOG00000013636) CBY3 (ENSSTOG00000013625) HNRNPH1 (ENSSTOG00000016376) RUFY1 (ENSSTOG00000016368) ADAMTS2 (ENSSTOG00000004811) ZNF354C (ENSSTOG00000023695) ZNF879 (ENSSTOG00000033666) GRM6 (ENSSTOG00000021282) ##22 ZNF454 (ENSSTOG00000029783) ZFP2 (ENSSTOG00000034472) ZNF354B (ENSSTOG00000008858) PROP1 (ENSSTOG00000013571) ENSSTOG00000027829 ENSSTOG00000001898 Arctic ground squirrel MODERN SPECIES 616 HNRNPH1 (ENSUPAG00010002880) RUFY1 (ENSUPAG00010002901) ADAMTS2 (ENSUPAG00010002953) ZNF354C (ENSUPAG00010002992) ZNF879 (ENSUPAG00010003001) GRM6 (ENSUPAG00010003014) ##22 ZNF454 (ENSUPAG00010003038) ZFP2 (ENSUPAG00010003041) ZNF354B (ENSUPAG00010003044) PROP1 (ENSUPAG00010003061) Alpin marmot MODERN SPECIES 119 TBC1D9B (ENSMMMG00000010464) ENSMMMG00000010472 ENSMMMG00000010477 ENSMMMG00000010488 SQSTM1 (ENSMMMG00000010495) MGAT4B (ENSMMMG00000010531) LTC4S (ENSMMMG00000010544) MAML1 (ENSMMMG00000010563) CANX (ENSMMMG00000010583) ENSMMMG00000010630 HNRNPH1 (ENSMMMG00000010637) RUFY1 (ENSMMMG00000010729) ADAMTS2 (ENSMMMG00000010786) ZNF354C (ENSMMMG00000010838) ZNF879 (ENSMMMG00000010856) GRM6 (ENSMMMG00000010868) ##22 ZNF454 (ENSMMMG00000010924) ZFP2 (ENSMMMG00000010928) ZNF354B (ENSMMMG00000010934) PROP1 (ENSMMMG00000010955) ENSMMMG00000010966 PGBD2 (ENSMMMG00000010992) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005004884 TBC1D9B (ENSSVLG00005004773) MRNIP (ENSSVLG00005004714) SQSTM1 (ENSSVLG00005004679) MGAT4B (ENSSVLG00005004599) LTC4S (ENSSVLG00005004534) MAML1 (ENSSVLG00005004507) ENSSVLG00005004484 CANX (ENSSVLG00005004460) CBY3 (ENSSVLG00005004437) HNRNPH1 (ENSSVLG00005004313) RUFY1 (ENSSVLG00005004214) ADAMTS2 (ENSSVLG00005004107) ZNF354C (ENSSVLG00005004083) ZNF879 (ENSSVLG00005004068) GRM6 (ENSSVLG00005004048) ##22 ZNF454 (ENSSVLG00005004024) ZFP2 (ENSSVLG00005004011) ZNF354B (ENSSVLG00005003997) PROP1 (ENSSVLG00005003982) ENSSVLG00005003957 ENSSVLG00005003942 ENSSVLG00005003936 ENSSVLG00005003918 ENSSVLG00005003905 #21 ENSSVLG00005003893 ZNF354A (ENSSVLG00005003883) CLK4 (ENSSVLG00005003803) COL23A1 (ENSSVLG00005003715) PHYKPL (ENSSVLG00005003681) HNRNPAB (ENSSVLG00005003613) Marsupialia ANCESTRAL SPECIES 29 ENSGT00940000161081 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000156963.a.b ENSGT00940000160485 ENSGT00940000158975 ENSGT00940000160369 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352.a ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000159563 ENSGT00940000161156 ENSGT00940000159128 ENSGT00390000017780.e ENSGT00950000183102.C.f ENSGT00950000182827.B ENSGT00940000161689 Marsupialia_b ANCESTRAL SPECIES 31 ENSGT00940000161081 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000156963.a.b ENSGT00940000160485 ENSGT00940000158975.e ENSGT00940000160369.a ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352.a ENSGT00730000111044.b ENSGT00730000111044.a ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000159563 ENSGT00940000161156 ENSGT00940000159128 ENSGT00390000017780.e ENSGT00950000183102.C.f ENSGT00950000182827.B ENSGT00940000161689 Diprotodontia DUPLICATION Diprotodontia ANCESTRAL SPECIES 60 ENSGT00940000159633 ENSGT00940000161978 ENSGT00940000161081 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000156963.a.b ENSGT00940000160485 ENSGT00940000158975.e ENSGT00940000160369.a ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044.a ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.g ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000159563 ENSGT00940000161156 ENSGT00940000159128 ENSGT00390000017780.e ENSGT00950000183102.C.f ENSGT00950000182827.B ENSGT00940000161689 Diprotodontia_a ANCESTRAL SPECIES 58 ENSGT00940000159633 ENSGT00940000161978 ENSGT00940000161081.a ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000156963.a.b ENSGT00940000160485 ENSGT00940000158975.e ENSGT00940000160369.a ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00730000111044.a ENSGT00950000183005.a.a ENSGT00390000002062 ENSGT01030000234648.a.b.a.b.g ##22 ENSGT00390000017639 ENSGT00940000153634.a ENSGT00940000160063 ENSGT00730000110895.b.b ##29 ENSGT00940000161233 ENSGT00940000159173 ENSGT00530000063715.a ENSGT01030000234564.a.a.b.a ENSGT00940000159563 ENSGT00940000161156 ENSGT00940000159128 ENSGT00390000017780.e ENSGT00950000183102.C.f ENSGT00950000182827.B ENSGT00940000161689 koala MODERN SPECIES 294 ARAF (ENSPCIG00000028805) ENSPCIG00000033258 SYN1 (ENSPCIG00000028803) CFP (ENSPCIG00000028802) ENSPCIG00000034126 UXT (ENSPCIG00000028801) CDK16 (ENSPCIG00000028800) USP11 (ENSPCIG00000028796) UBA1 (ENSPCIG00000028009) RBM10 (ENSPCIG00000027962) IMP4 (ENSPCIG00000027960) MON1B (ENSPCIG00000027954) CXXC1 (ENSPCIG00000027942) ENSPCIG00000027937 ENSPCIG00000027936 GRM6 (ENSPCIG00000027935) ##22 ENSPCIG00000027932 WDR13 (ENSPCIG00000007549) SUV39H1 (ENSPCIG00000007547) ENSPCIG00000007542 SLC38A5 (ENSPCIG00000007378) TBC1D25 (ENSPCIG00000027924) EBP (ENSPCIG00000027919) PORCN (ENSPCIG00000027915) HDAC6 (ENSPCIG00000027912) GATA1 (ENSPCIG00000027911) CDK20 (ENSPCIG00000027909) TIMM17B (ENSPCIG00000027908) ENSPCIG00000027905 ENSPCIG00000027902 PIM2 (ENSPCIG00000027897) Common wonbat MODERN SPECIES 1079 ABT1 (ENSVURG00010010299) ENSVURG00010010306 ##22 WAS (ENSVURG00010010322) ##29 SLC38A5 (ENSVURG00010010329) TBC1D25 (ENSVURG00010010343) EBP (ENSVURG00010010353) PORCN (ENSVURG00010010369) HDAC6 (ENSVURG00010010455) GATA1 (ENSVURG00010010465) CDK20 (ENSVURG00010010475) TIMM17B (ENSVURG00010010486) ENSVURG00010010494 SLC35A2 (ENSVURG00010010497) PIM2 (ENSVURG00010010500) ENSVURG00010010507 ENSVURG00010010519 GRIPAP1 (ENSVURG00010010555) Wallaby MODERN SPECIES 12433 GRM6 (ENSMEUG00000008360) ##22 Diprotodontia ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.h ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b.h ##22 Common wonbat MODERN SPECIES 127 ENSVURG00010001167 ##22 Tasmanian devil MODERN SPECIES 21 ENSSHAG00000001846 ENSSHAG00000006228 ENSSHAG00000026397 ENSSHAG00000028647 ENSSHAG00000022245 ENSSHAG00000007378 ENSSHAG00000007468 ENSSHAG00000007608 ENSSHAG00000007724 ENSSHAG00000008267 ENSSHAG00000008415 ENSSHAG00000008525 ENSSHAG00000003967 ENSSHAG00000003661 ENSSHAG00000003493 ENSSHAG00000003137 ##22 ENSSHAG00000028465 ENSSHAG00000001207 ENSSHAG00000000138 ENSSHAG00000022637 ENSSHAG00000002882 ##29 ENSSHAG00000000940 ENSSHAG00000032369 ENSSHAG00000001709 ENSSHAG00000001040 ENSSHAG00000021720 ENSSHAG00000021486 ENSSHAG00000001555 ENSSHAG00000021727 OTUD5 (ENSSHAG00000024529) PIM2 (ENSSHAG00000022404) Opossum MODERN SPECIES 627 SYN1 (ENSMODG00000010825) ENSMODG00000010849 CFP (ENSMODG00000010789) ENSMODG00000010777 CDK16 (ENSMODG00000010767) USP11 (ENSMODG00000010726) UBA1 (ENSMODG00000010677) RBM10 (ENSMODG00000010640) IMP4 (ENSMODG00000010577) ENSMODG00000010588 MON1B (ENSMODG00000010558) ENSMODG00000037413 CXXC1 (ENSMODG00000010555) ENSMODG00000010534 ABT1 (ENSMODG00000010429) GRM6 (ENSMODG00000010422) ##22 ENSMODG00000043220 WDR13 (ENSMODG00000010303) SUV39H1 (ENSMODG00000010324) WAS (ENSMODG00000010317) ##29 ENSMODG00000010292 TBC1D25 (ENSMODG00000010259) EBP (ENSMODG00000010248) PORCN (ENSMODG00000010236) HDAC6 (ENSMODG00000010166) ENSMODG00000044553 GATA1 (ENSMODG00000010099) CDK20 (ENSMODG00000010092) TIMM17B (ENSMODG00000010069) ENSMODG00000010063 SLC35A2 (ENSMODG00000010048) Platypus MODERN SPECIES 17 UBA1 (ENSOANG00000036317) ENSOANG00000004553 NDUFB11 (ENSOANG00000037175) ENSOANG00000046222 RBM10 (ENSOANG00000004552) ENSOANG00000004550 ENSOANG00000004774 ENSOANG00000047650 IMP4 (ENSOANG00000014598) ENSOANG00000014597 MON1B (ENSOANG00000039235) CXXC1 (ENSOANG00000014594) ENSOANG00000042027 ENSOANG00000051319 ABT1 (ENSOANG00000014590) GRM6 (ENSOANG00000014586) ##22 ENSOANG00000038903 WDR13 (ENSOANG00000006932) SUV39H1 (ENSOANG00000015959) WAS (ENSOANG00000015230) ##29 SLC38A5 (ENSOANG00000036935) ENSOANG00000014584 TBC1D25 (ENSOANG00000038580) EBP (ENSOANG00000012972) PORCN (ENSOANG00000005775) ENSOANG00000047880 HDAC6 (ENSOANG00000002256) GATA1 (ENSOANG00000010765) CDK20 (ENSOANG00000010766) TIMM17B (ENSOANG00000014281) PQBP1 (ENSOANG00000031396) Anura ANCESTRAL SPECIES 456 ENSGT01030000234648.a.b.a.b ##22 ENSGT00940000165541 ENSGT00390000003022 Frog MODERN SPECIES 12 grm8l (ENSXETG00000018732) ##22 XB22062963 [provisional:camkv] (ENSXETG00000046886) Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000014916 GDI1 (ENSLLEG00000014696) ENSLLEG00000014500 ENSLLEG00000014459 ENSLLEG00000014450 ENSLLEG00000014440 ENSLLEG00000014195 SLC35A2 (ENSLLEG00000014108) ENSLLEG00000014085 OTUD5 (ENSLLEG00000014017) ENSLLEG00000013910 ENSLLEG00000012337 COMT (ENSLLEG00000011999) ABT1 (ENSLLEG00000011917) ENSLLEG00000011864 GRM6 (ENSLLEG00000011740) ##22 ENSLLEG00000011625 NDUFB11 (ENSLLEG00000011577) PQBP1 (ENSLLEG00000011392) TIMM17B (ENSLLEG00000010838) ENSLLEG00000010766 CDK20 (ENSLLEG00000010690) ENSLLEG00000010635 ENSLLEG00000010530 ENSLLEG00000010488 ANAPC2 (ENSLLEG00000010272) ENSLLEG00000010236 ENSLLEG00000010207 ENSLLEG00000010183 ENSLLEG00000010171 ENSLLEG00000010110 Coelacanth MODERN SPECIES 2699 GRM6 (ENSLACG00000000463) ##22 ENSLACG00000004378 MON1B (ENSLACG00000006217) ENSLACG00000007013 Vertebrata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 NAME_4 ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Sheepshead minnow MODERN SPECIES 1771 ENSCVAG00000010570 ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Coho salmon MODERN SPECIES 16 nkain4 (ENSOKIG00005020251) ENSOKIG00005020229 YTHDF1 (ENSOKIG00005020191) bhlhe23 (ENSOKIG00005020180) slc17a9b (ENSOKIG00005019977) gid8b (ENSOKIG00005019960) ENSOKIG00005019947 ENSOKIG00005019929 DNAH12 (ENSOKIG00005018693) ASB14 (ENSOKIG00005018598) ENSOKIG00005018584 AMIGO3 (ENSOKIG00005018577) ENSOKIG00005018574 ENSOKIG00005018563 ENSOKIG00005018537 ##22 ENSOKIG00005018530 ##22 DAG1 (ENSOKIG00005018520) PCBP4 (ENSOKIG00005018503) DOCK3 (ENSOKIG00005017476) DCAF1 (ENSOKIG00005015679) ssuh2rs1 (ENSOKIG00005015560) ENSOKIG00005015535 grip2a (ENSOKIG00005013376) ENSOKIG00005013127 ABTB1 (ENSOKIG00005013075) ENSOKIG00005013065 ENSOKIG00005013051 cers5 (ENSOKIG00005012981) slmapb (ENSOKIG00005012966) abhd6b (ENSOKIG00005012954) kctd6b (ENSOKIG00005012943) Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Amniota ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Mammalia ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Theria ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Eutheria ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Atlantogenata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Xenarthra ANCESTRAL SPECIES ENSGT01030000234648.a.b.b ##22 Armadillo MODERN SPECIES 4088 ENSDNOG00000034567 ##22 Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b.a ##22 Hagfish DUPLICATION Hagfish MODERN SPECIES 243 ENSEBUG00000007233 ##22 Hagfish MODERN SPECIES 1248 ENSEBUG00000009007 #22 ENSEBUG00000014427 ##22 ENSEBUG00000008205 ##22 edem1 (ENSEBUG00000005117) ENSEBUG00000001514 ctsc (ENSEBUG00000003805) ENSEBUG00000002762 ENSEBUG00000010228 Lamprey MODERN SPECIES 1708 ENSPMAG00000006812 ##22 Cyclostomata ANCESTRAL SPECIES ENSGT01030000234648.a.b.b.b ##22 Lamprey MODERN SPECIES 1420 ENSPMAG00000002757 ENSPMAG00000002755 ##22 Vertebrata ANCESTRAL SPECIES 1042 ENSGT01030000234648.a.a ##22 ENSGT00940000157717 Cyclostomata ANCESTRAL SPECIES 1157 ENSGT01030000234648.a.a ##22 ENSGT00940000157717 Hagfish DUPLICATION Hagfish MODERN SPECIES 1248 ENSEBUG00000009007 #22 ENSEBUG00000014427 ##22 ENSEBUG00000008205 ##22 edem1 (ENSEBUG00000005117) ENSEBUG00000001514 ctsc (ENSEBUG00000003805) ENSEBUG00000002762 ENSEBUG00000010228 Hagfish MODERN SPECIES 720 ENSEBUG00000012364 ##22 Gnathostomata ANCESTRAL SPECIES 331 ENSGT01030000234648.a.a ##22 ENSGT00940000157717 ENSGT00940000154861 ENSGT00940000155071.D ENSGT00390000008983.a ENSGT00940000157154 ENSGT00940000165984 ENSGT00390000016404 ENSGT01050000244882.b.c.a ENSGT00390000009678 Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Amniota ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Sauria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Lepidosauria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 tuatara MODERN SPECIES 15 ENSSPUG00000005522 ##22 ENSSPUG00000005505 ##22 Actinopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Neopterygii ANCESTRAL SPECIES 70 ENSGT00940000154280 ENSGT00940000156550 ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00950000183146.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00390000005351 ENSGT00940000158813 ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429 ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514 ENSGT00390000005874 ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873 ENSGT00940000158890 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615 ENSGT00940000154583 Spotted gar MODERN SPECIES 671 rps23 (ENSLOCG00000013284) DNAH12 (ENSLOCG00000013287) ASB14 (ENSLOCG00000013300) appl1 (ENSLOCG00000013306) HESX1 (ENSLOCG00000013317) il17rd (ENSLOCG00000013320) arhgef3 (ENSLOCG00000013328) TASOR (ENSLOCG00000013340) CCDC66 (ENSLOCG00000013348) IP6K1 (ENSLOCG00000013360) gmppb (ENSLOCG00000013363) RNF123 (ENSLOCG00000013373) AMIGO3 (ENSLOCG00000018259) ENSLOCG00000013378 lmcd1 (ENSLOCG00000013380) GRM7 (ENSLOCG00000013382) ##22 nicn1 (ENSLOCG00000013395) dag1 (ENSLOCG00000013399) pcbp4 (ENSLOCG00000013402) rbm15b (ENSLOCG00000013409) manf (ENSLOCG00000013413) DOCK3 (ENSLOCG00000013416) DCAF1 (ENSLOCG00000013471) ENSLOCG00000013481 ENSLOCG00000013492 ssuh2.4 (ENSLOCG00000013496) ENSLOCG00000013502 rpl32 (ENSLOCG00000013512) cand2 (ENSLOCG00000013520) sec13 (ENSLOCG00000013529) grip2a (ENSLOCG00000013537) Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000156550 ENSGT00940000154280 ENSGT00550000074784.b ENSGT00940000158156.b ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00390000008429.e.b ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873 ENSGT00940000158890 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 388 ENSGT00390000010053.l ENSGT00940000157928.g ENSGT00940000155306.a ENSGT00940000157869.e.a ENSGT00940000155146.v ENSGT00940000157660.h ENSGT00940000158156.a ENSGT00940000154280 ENSGT00530000063735.a.b ENSGT00940000157802.k.b ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.a.a ##22 Asian bonytongue MODERN SPECIES IPPK (ENSSFOG00015013541) stab1 (ENSSFOG00015013421) ENSSFOG00015013402 kctd6b (ENSSFOG00015025544) slmapa (ENSSFOG00015013304) ENSSFOG00015013285 ENSSFOG00015013262 ENSSFOG00015013245 IP6K1 (ENSSFOG00015013241) ENSSFOG00015013232 DNAH12 (ENSSFOG00015013120) ENSSFOG00015027648 ENSSFOG00015032273 IP6K1 (ENSSFOG00015013045) AMIGO3 (ENSSFOG00015013033) GRM7 (ENSSFOG00015012045) ##22 DAG1 (ENSSFOG00015032160) PCBP4 (ENSSFOG00015029169) manf (ENSSFOG00015030655) DOCK3 (ENSSFOG00015012131) DCAF1 (ENSSFOG00015012254) rpl32 (ENSSFOG00015028671) grip2a (ENSSFOG00015012371) slc6a6a (ENSSFOG00015012499) ABTB1 (ENSSFOG00015032411) ENSSFOG00015030782 ENSSFOG00015018330 gpd1a (ENSSFOG00015031260) SMARCD1 (ENSSFOG00015018240) asic1a (ENSSFOG00015018213) spryd4 (ENSSFOG00015026803) P. kingsleyae MODERN SPECIES 3 NAB2 (ENSPKIG00000006062) cd63 (ENSPKIG00000006017) letmd1 (ENSPKIG00000005986) IPPK (ENSPKIG00000005960) ENSPKIG00000005937 ENSPKIG00000005913 ENSPKIG00000005896 KCTD6 (ENSPKIG00000005875) pdhb (ENSPKIG00000005802) slmapa (ENSPKIG00000005625) ENSPKIG00000005540 DNAH12 (ENSPKIG00000005294) ENSPKIG00000005171 IP6K1 (ENSPKIG00000005140) AMIGO3 (ENSPKIG00000005130) GRM7 (ENSPKIG00000005094) ##22 mmp9 (ENSPKIG00000005040) ENSPKIG00000005006 fez1 (ENSPKIG00000004972) esama (ENSPKIG00000004923) MSANTD2 (ENSPKIG00000004896) robo3 (ENSPKIG00000004816) ENSPKIG00000004757 ENSPKIG00000004740 tmem218 (ENSPKIG00000004724) pknox2 (ENSPKIG00000004642) PANX3 (ENSPKIG00000004600) ENSPKIG00000004587 opcml (ENSPKIG00000004566) ntm (ENSPKIG00000004498) lim2.1 (ENSPKIG00000004418) Osteoglossiformes ANCESTRAL SPECIES 34 ENSGT00940000160207.a ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.a ENSGT00390000012411 ENSGT00940000157802.k.a ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a.b ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.f ENSGT00940000160561 ENSGT00390000007160.a.a.r ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.j ENSGT00940000155615.i.a ENSGT00940000154583.e.a Asian bonytongue MODERN SPECIES 14 HELZ2 (ENSSFOG00015020580) ENSSFOG00015020597 ENSSFOG00015020601 ENSSFOG00015020619 HESX1 (ENSSFOG00015020712) il17rd (ENSSFOG00015020761) arhgef3 (ENSSFOG00015032625) TASOR (ENSSFOG00015020843) CCDC66 (ENSSFOG00015020887) IP6K1 (ENSSFOG00015020899) gmppb (ENSSFOG00015020926) lmcd1 (ENSSFOG00015026071) ENSSFOG00015025673 RNF123 (ENSSFOG00015020965) AMIGO3 (ENSSFOG00015020997) GRM7 (ENSSFOG00015008278) ##22 dag1 (ENSSFOG00015008254) pcbp4 (ENSSFOG00015028307) rbm15b (ENSSFOG00015026568) manf (ENSSFOG00015024701) DOCK3 (ENSSFOG00015007666) DCAF1 (ENSSFOG00015007471) ENSSFOG00015007443 ENSSFOG00015007426 ssuh2.4 (ENSSFOG00015007409) ssuh2rs1 (ENSSFOG00015007404) ENSSFOG00015026029 cand2 (ENSSFOG00015007228) sec13 (ENSSFOG00015007199) GRIP2 (ENSSFOG00015007150) slc6a6b (ENSSFOG00015007103) P. kingsleyae MODERN SPECIES 126 RIMS4 (ENSPKIG00000011049) ENSPKIG00000011038 ANGPT4 (ENSPKIG00000011009) ENSPKIG00000010981 HESX1 (ENSPKIG00000010964) il17rd (ENSPKIG00000010943) arhgef3 (ENSPKIG00000010859) TASOR (ENSPKIG00000010794) CCDC66 (ENSPKIG00000010727) IP6K1 (ENSPKIG00000010674) gmppb (ENSPKIG00000010618) lmcd1 (ENSPKIG00000010590) ENSPKIG00000010564 AMIGO3 (ENSPKIG00000010551) RNF123 (ENSPKIG00000010414) GRM7 (ENSPKIG00000010345) ##22 ENSPKIG00000010330 nicn1 (ENSPKIG00000010313) dag1 (ENSPKIG00000010294) pcbp4 (ENSPKIG00000010244) rbm15b (ENSPKIG00000010201) manf (ENSPKIG00000010172) DOCK3 (ENSPKIG00000010079) DCAF1 (ENSPKIG00000009962) ENSPKIG00000009891 ENSPKIG00000009852 ssuh2.4 (ENSPKIG00000009826) ssuh2rs1 (ENSPKIG00000009794) ENSPKIG00000009723 cand2 (ENSPKIG00000009636) sec13 (ENSPKIG00000009564) Clupeocephala ANCESTRAL SPECIES 7 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00390000008429.e.b ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00390000017740.a.b ENSGT00940000153393.B Otomorpha ANCESTRAL SPECIES 29 ENSGT00980000199890 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a ENSGT00940000154583.e.a Otophysi ANCESTRAL SPECIES 2 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000171658 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a ENSGT00940000154583.e.a Characiphysae ANCESTRAL SPECIES 5 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000171658 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00940000153973 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a Channel catfish MODERN SPECIES 13 ENSIPUG00000007213 ASB14 (ENSIPUG00000007235) ASB14 (ENSIPUG00000007317) appl1 (ENSIPUG00000007329) hesx1 (ENSIPUG00000007422) il17rd (ENSIPUG00000007463) arhgef3 (ENSIPUG00000007527) TASOR (ENSIPUG00000007589) ccdc66 (ENSIPUG00000007623) IP6K1 (ENSIPUG00000007656) gmppb (ENSIPUG00000007693) lmcd1 (ENSIPUG00000007760) terf2ip (ENSIPUG00000007768) RNF123 (ENSIPUG00000007804) amigo3 (ENSIPUG00000008027) GRM7 (ENSIPUG00000008053) ##22 nicn1 (ENSIPUG00000008110) DAG1 (ENSIPUG00000008175) pcbp4 (ENSIPUG00000008212) rbm15b (ENSIPUG00000008345) MANF (ENSIPUG00000008352) DOCK3 (ENSIPUG00000008398) ENSIPUG00000008535 ENSIPUG00000008545 ENSIPUG00000008562 ENSIPUG00000008605 rpl32 (ENSIPUG00000008634) cand2 (ENSIPUG00000008700) sec13 (ENSIPUG00000008812) GRIP2 (ENSIPUG00000008974) slc6a6b (ENSIPUG00000009147) Characiphysae_b ANCESTRAL SPECIES 8 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000171658 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00940000153973 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a Characoidei ANCESTRAL SPECIES 100 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000171658 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00940000165085 ENSGT00440000038003 ENSGT00940000163873.d ENSGT00940000163873.c.b ENSGT00940000158890 ENSGT00940000153973 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a Red-bellied piranha MODERN SPECIES 104 ASB14 (ENSPNAG00000006878) appl1 (ENSPNAG00000029237) HESX1 (ENSPNAG00000029270) il17rd (ENSPNAG00000029287) arhgef3 (ENSPNAG00000029400) TASOR (ENSPNAG00000029581) CCDC66 (ENSPNAG00000029685) IP6K1 (ENSPNAG00000029711) gmppb (ENSPNAG00000004673) lmcd1 (ENSPNAG00000029733) terf2ip (ENSPNAG00000029738) ENSPNAG00000029749 AMIGO3 (ENSPNAG00000029753) RNF123 (ENSPNAG00000029778) ENSPNAG00000029788 GRM7 (ENSPNAG00000004677) ##22 nicn1 (ENSPNAG00000029799) Mexicana tetra MODERN SPECIES 14 ENSAMXG00000031766 rps23 (ENSAMXG00000035093) ASB14 (ENSAMXG00000004021) appl1 (ENSAMXG00000004034) HESX1 (ENSAMXG00000004052) il17rd (ENSAMXG00000004054) arhgef3 (ENSAMXG00000033424) ENSAMXG00000038617 CCDC66 (ENSAMXG00000004073) IP6K1 (ENSAMXG00000033171) gmppb (ENSAMXG00000032893) lmcd1 (ENSAMXG00000004086) ENSAMXG00000004094 AMIGO3 (ENSAMXG00000025804) RNF123 (ENSAMXG00000004097) GRM7 (ENSAMXG00000004103) ##22 nicn1 (ENSAMXG00000031447) dag1 (ENSAMXG00000015523) pcbp4 (ENSAMXG00000033125) rbm15b (ENSAMXG00000025805) manf (ENSAMXG00000040494) DOCK3 (ENSAMXG00000004203) ENSAMXG00000043899 ENSAMXG00000004300 ssuh2.4 (ENSAMXG00000031934) ENSAMXG00000043820 rpl32 (ENSAMXG00000043771) cand2 (ENSAMXG00000032469) sec13 (ENSAMXG00000004356) GRIP2 (ENSAMXG00000004381) slc6a6b (ENSAMXG00000004425) Electric eel MODERN SPECIES 55 rps23 (ENSEEEG00000010666) ASB14 (ENSEEEG00000010664) appl1 (ENSEEEG00000010648) HESX1 (ENSEEEG00000010630) il17rd (ENSEEEG00000010627) arhgef3 (ENSEEEG00000010266) ENSEEEG00000010257 ENSEEEG00000010250 IP6K1 (ENSEEEG00000010249) gmppb (ENSEEEG00000010244) lmcd1 (ENSEEEG00000010240) terf2ip (ENSEEEG00000010238) AMIGO3 (ENSEEEG00000010237) RNF123 (ENSEEEG00000010227) ENSEEEG00000010216 GRM7 (ENSEEEG00000010215) ##22 nicn1 (ENSEEEG00000010213) dag1 (ENSEEEG00000010211) pcbp4 (ENSEEEG00000010210) rbm15b (ENSEEEG00000010209) manf (ENSEEEG00000010208) DOCK3 (ENSEEEG00000010206) ENSEEEG00000010154 Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00940000160465.l ENSGT00940000153664.B.r ENSGT00940000154942.f ENSGT00400000022158.b ENSGT00940000157837.d ENSGT00390000002554 ENSGT00940000157798.b ENSGT00940000157331.b.a ENSGT00940000157322.b.b ENSGT00940000162611.a.a.a ENSGT00530000063604.A ENSGT00940000162476 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00390000017740.a.b ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00940000158890 ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 14 KCNIP2 (ENSDARG00000075846) ARHGAP19 (ENSDARG00000083189) slit1b (ENSDARG00000099446) ENSDARG00000100908 hoga1 (ENSDARG00000018944) atpv0e2 (ENSDARG00000059057) ENSDARG00000116068 HYKK (ENSDARG00000077610) ENSDARG00000087901 ENSDARG00000087407 ENSDARG00000109630 ENSDARG00000060953 terf2ip (ENSDARG00000103977) AMIGO3 (ENSDARG00000074469) RNF123 (ENSDARG00000031269) ENSDARG00000114852 ##22 GRM7 (ENSDARG00000100267) ##22 nicn1 (ENSDARG00000069677) dag1 (ENSDARG00000016153) pcbp4 (ENSDARG00000024276) rbm15b (ENSDARG00000078966) manf (ENSDARG00000063177) DOCK3 (ENSDARG00000063180) ENSDARG00000099655 ENSDARG00000113244 LSM3 (ENSDARG00000089663) slc6a6b (ENSDARG00000098438) GRIP2 (ENSDARG00000027618) sec13 (ENSDARG00000054807) cand2 (ENSDARG00000005749) rpl32 (ENSDARG00000054818) Zebrafish MODERN SPECIES 14 ARHGAP19 (ENSDARG00000083189) slit1b (ENSDARG00000099446) ENSDARG00000100908 hoga1 (ENSDARG00000018944) atpv0e2 (ENSDARG00000059057) ENSDARG00000116068 HYKK (ENSDARG00000077610) ENSDARG00000087901 ENSDARG00000087407 ENSDARG00000109630 ENSDARG00000060953 terf2ip (ENSDARG00000103977) AMIGO3 (ENSDARG00000074469) RNF123 (ENSDARG00000031269) ENSDARG00000114852 ##22 GRM7 (ENSDARG00000100267) ##22 nicn1 (ENSDARG00000069677) dag1 (ENSDARG00000016153) pcbp4 (ENSDARG00000024276) rbm15b (ENSDARG00000078966) manf (ENSDARG00000063177) DOCK3 (ENSDARG00000063180) ENSDARG00000099655 ENSDARG00000113244 LSM3 (ENSDARG00000089663) slc6a6b (ENSDARG00000098438) GRIP2 (ENSDARG00000027618) sec13 (ENSDARG00000054807) cand2 (ENSDARG00000005749) rpl32 (ENSDARG00000054818) ENSDARG00000073789 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 472 ENSGT00940000153386.A.l ENSGT00950000183189.a.b.a.b ENSGT00940000154384.b ENSGT00940000160614.r ENSGT00940000156162.C.b ENSGT00940000156941 ENSGT00950000182899.C.a.b ENSGT00950000182930.B.f ENSGT00390000018319.a.b.b.b.b.b ENSGT00940000160221.c.d ENSGT00940000165866 ENSGT00940000155631.j ENSGT00390000005351.p ENSGT00940000155781.q.b ENSGT00950000183146.b.b.b ENSGT01030000234648.a.a.c.a.e ##22 ENSGT00390000001505.e ENSGT00390000008429.e.a.d ENSGT00940000159711.i ENSGT00940000160561 ENSGT00390000007160.a.a.i ENSGT00940000155514.c.b Goldfish MODERN SPECIES 14 ENSCARG00000016749 ENSCARG00000016767 ENSCARG00000016774 ENSCARG00000016777 ENSCARG00000016786 ENSCARG00000016801 ENSCARG00000022972 ENSCARG00000022974 ENSCARG00000022980 ENSCARG00000022997 ENSCARG00000023020 terf2ip (ENSCARG00000023026) RNF123 (ENSCARG00000023047) ENSCARG00000023193 ENSCARG00000023199 GRM7 (ENSCARG00000023226) ##22 nicn1 (ENSCARG00000023476) dag1 (ENSCARG00000023482) pcbp4 (ENSCARG00000023492) rbm15b (ENSCARG00000023519) manf (ENSCARG00000023537) DOCK3 (ENSCARG00000023610) ENSCARG00000024994 ENSCARG00000025003 ENSCARG00000025008 ENSCARG00000025017 ENSCARG00000025028 ENSCARG00000025032 ENSCARG00000025040 ENSCARG00000025050 ENSCARG00000025056 Cyprininae_a ANCESTRAL SPECIES 300 ENSGT00940000153386.A.l ENSGT00950000183189.a.b.a.b ENSGT00940000154384.b ENSGT00940000160614.r ENSGT00940000156162.C.b ENSGT00940000156941 ENSGT00950000182899.C.a.b ENSGT00950000182930.B.f ENSGT00390000018319.a.b.b.b.b.b ENSGT00940000160221.c.d ENSGT00940000165866.e ENSGT00940000155631.j ENSGT00390000005351.p.a ENSGT00940000155781.q.b ENSGT00950000183146.b.b.b ENSGT01030000234648.a.a.c.a.e ##22 ENSGT00390000001505.e ENSGT00390000008429.e.a.d ENSGT00940000159711.i ENSGT00940000160561.l ENSGT00390000007160.a.a.i ENSGT00940000155514.c.b Common carp reference MODERN SPECIES 5 ENSCCRG00000057997 ENSCCRG00000052939 ENSCCRG00000072056 ENSCCRG00000066410 ENSCCRG00000078543 ENSCCRG00000054158 ENSCCRG00000065730 ENSCCRG00000056296 ENSCCRG00000068958 ENSCCRG00000068015 ENSCCRG00000057188 ENSCCRG00000053461 ENSCCRG00000026923 ENSCCRG00000058417 ENSCCRG00000001352 ENSCCRG00000023094 ##22 nicn1 (ENSCCRG00000070732) dag1 (ENSCCRG00000012418) ENSCCRG00000058580 pcbp4 (ENSCCRG00000023698) rbm15b (ENSCCRG00000023692) manf (ENSCCRG00000067445) DOCK3 (ENSCCRG00000022035) ENSCCRG00000080996 ENSCCRG00000045654 ENSCCRG00000073985 ENSCCRG00000063253 ENSCCRG00000063740 ENSCCRG00000053291 slc6a6b (ENSCCRG00000052482) ENSCCRG00000052489 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 158 RNF123 (ENSSGRG00000023214) ENSSGRG00000023339 ENSSGRG00000023340 ##22 GRM7 (ENSSGRG00000023341) ##22 ENSSGRG00000023367 nicn1 (ENSSGRG00000023369) dag1 (ENSSGRG00000023373) pcbp4 (ENSSGRG00000023379) rbm15b (ENSSGRG00000023380) manf (ENSSGRG00000023381) DOCK3 (ENSSGRG00000023455) ENSSGRG00000027995 ENSSGRG00000027998 Golden-line barbel MODERN SPECIES 158 RNF123 (ENSSGRG00000023214) ENSSGRG00000023339 ENSSGRG00000023340 ##22 GRM7 (ENSSGRG00000023341) ##22 ENSSGRG00000023367 nicn1 (ENSSGRG00000023369) dag1 (ENSSGRG00000023373) pcbp4 (ENSSGRG00000023379) rbm15b (ENSSGRG00000023380) manf (ENSSGRG00000023381) DOCK3 (ENSSGRG00000023455) ENSSGRG00000027995 ENSSGRG00000027998 Cyprininae ANCESTRAL SPECIES 1055 ENSGT00390000005351.o ENSGT00940000155781.q.a ENSGT00950000183146.b.b.a ENSGT01030000234648.a.a.c.a.f ##22 Goldfish MODERN SPECIES 41 sde2 (ENSCARG00000029526) mrps28 (ENSCARG00000029551) capn1b (ENSCARG00000029614) capn2b (ENSCARG00000030450) ENSCARG00000036781 atpv0e2 (ENSCARG00000036787) ENSCARG00000036842 ENSCARG00000036993 ENSCARG00000036999 RNF123 (ENSCARG00000037082) ENSCARG00000037446 ENSCARG00000037456 ENSCARG00000037473 ENSCARG00000037528 ENSCARG00000037537 GRM7 (ENSCARG00000037657) ##22 ENSCARG00000038274 ENSCARG00000038298 slit1b (ENSCARG00000038380) KCNIP2 (ENSCARG00000039607) armh3 (ENSCARG00000039679) ENSCARG00000040018 ENSCARG00000040027 srfa (ENSCARG00000040068) rnf13 (ENSCARG00000040153) pfn2b (ENSCARG00000040238) ENSCARG00000040281 ENSCARG00000040286 ENSCARG00000040292 ENSCARG00000040346 ENSCARG00000040762 Cyprininae_a ANCESTRAL SPECIES 430 ENSGT00940000153664.B.r.c.a.a ENSGT00940000154942.f.f.b ENSGT00400000022158.b.g ENSGT00940000157837.d.c ENSGT00390000002554.k ENSGT00940000157798.b.b ENSGT00940000157331.b.a.j ENSGT00940000157322.b.b.b ENSGT00940000162611.a.a.a.h ENSGT00940000162611.b.b ENSGT00530000063604.A.a ENSGT00940000162476.f ENSGT00390000005351.p.b ENSGT00940000155781.q.a ENSGT00950000183146.b.b.a ENSGT01030000234648.a.a.c.a.f ##22 Common carp reference MODERN SPECIES 43 rnf13 (ENSCCRG00000035726) srfa (ENSCCRG00000078070) ENSCCRG00000057450 ENSCCRG00000013905 armh3 (ENSCCRG00000020015) ENSCCRG00000019997 slit1b (ENSCCRG00000044549) ENSCCRG00000073211 ENSCCRG00000075405 hoga1 (ENSCCRG00000071117) ENSCCRG00000001561 terf2ip (ENSCCRG00000050331) ENSCCRG00000009347 ENSCCRG00000060380 ENSCCRG00000021216 ENSCCRG00000048023 ##22 nicn1 (ENSCCRG00000012423) ENSCCRG00000082314 ENSCCRG00000054387 dag1 (ENSCCRG00000031847) ENSCCRG00000059042 pcbp4 (ENSCCRG00000066903) rbm15b (ENSCCRG00000023934) manf (ENSCCRG00000023676) DOCK3 (ENSCCRG00000023733) ENSCCRG00000061920 ENSCCRG00000006235 ENSCCRG00000037074 ENSCCRG00000001927 ENSCCRG00000001928 ENSCCRG00000001931 Golden-line barbel MODERN SPECIES 521 ENSSGRG00000032915 clrn1 (ENSSGRG00000032916) GPR171 (ENSSGRG00000032917) ENSSGRG00000032918 P2RY14 (ENSSGRG00000032919) GRM7 (ENSSGRG00000032922) ##22 Clupeiformes ANCESTRAL SPECIES 87 ENSGT00980000199890 ENSGT00550000074784.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711 ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c Denticle herring MODERN SPECIES 3 ENSDCDG00000008956 RNF123 (ENSDCDG00000009052) AMIGO3 (ENSDCDG00000011242) ENSDCDG00000011263 RNF123 (ENSDCDG00000011403) GRM7 (ENSDCDG00000011627) ##22 ENSDCDG00000015126 nicn1 (ENSDCDG00000015134) dag1 (ENSDCDG00000015141) pcbp4 (ENSDCDG00000015151) rbm15b (ENSDCDG00000015158) manf (ENSDCDG00000015161) DOCK3 (ENSDCDG00000015428) ENSDCDG00000027317 ENSDCDG00000027321 tmcc1b (ENSDCDG00000027322) etnk2 (ENSDCDG00000027323) sox13 (ENSDCDG00000027325) snrpe (ENSDCDG00000002978) zc3h11a (ENSDCDG00000003019) ENSDCDG00000003208 Atlantic herring MODERN SPECIES 21 ENSCHAG00000024717 ASB14 (ENSCHAG00000024783) ENSCHAG00000024787 appl1 (ENSCHAG00000001254) HESX1 (ENSCHAG00000002050) il17rd (ENSCHAG00000002126) arhgef3 (ENSCHAG00000002258) ENSCHAG00000003007 CCDC66 (ENSCHAG00000003104) IP6K1 (ENSCHAG00000003231) gmppb (ENSCHAG00000003361) lmcd1 (ENSCHAG00000003423) ENSCHAG00000003453 RNF123 (ENSCHAG00000003673) AMIGO3 (ENSCHAG00000008242) GRM7 (ENSCHAG00000008320) ##22 nicn1 (ENSCHAG00000009626) dag1 (ENSCHAG00000009630) ENSCHAG00000009631 pck1 (ENSCHAG00000009647) ENSCHAG00000009750 strip1 (ENSCHAG00000009789) RBM15 (ENSCHAG00000010286) manf (ENSCHAG00000010297) DOCK3 (ENSCHAG00000010542) USP48 (ENSCHAG00000016461) ENSCHAG00000016900 SLITRK2 (ENSCHAG00000016933) Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT01090000260263 ENSGT00550000074784.b.e.b.b ENSGT00940000156550.a ENSGT00940000156624 ENSGT00940000156780 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00490000043388.b.a Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 98 ENSGT00940000157802 ENSGT00940000158909 ENSGT00940000158813 ENSGT00390000005351 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a.g ##22 ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000165085.b ENSGT00440000038003 ENSGT00940000163873.c.b ENSGT00940000158890.h ENSGT00390000017740.a.b ENSGT00490000043388.b.a ENSGT00730000111323 ENSGT01050000244824.F Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 322 ENSGT00940000157802.v.b ENSGT00940000158909 ENSGT00940000158813.a.a.a ENSGT00390000005351 ENSGT00950000183146.b.b.c ENSGT00940000155781 ENSGT01030000234648.a.a.c.a.g.a ##22 ENSGT00940000154285.a.a.e.b ENSGT00990000203979 ENSGT00390000001505 ENSGT00390000008429.e.a.f ENSGT00940000159711.g.e ENSGT00940000160561.`b ENSGT00390000007160.a.a.p ENSGT00940000155514.c.c.a ENSGT00940000165085.b.a ENSGT00940000163873.c.b ENSGT00940000158890.h.a ENSGT00940000153393.B.g ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000155615.i.a.a ENSGT00940000154583.e.b.b.a.a Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00940000160690.j ENSGT00390000017509.d ENSGT00390000017509.c.a ENSGT00390000003282.B.f.a.a ENSGT00390000000616 ENSGT00950000183160.C ENSGT00940000156199.a.a.d ENSGT00940000156173.k.a ENSGT00940000155356.c.b.b ENSGT00940000157802.v.b ENSGT00940000158909 ENSGT00940000158813.a.a.a ENSGT00390000005351 ENSGT00950000183146.b.b.c ENSGT00940000155781 ENSGT01030000234648.a.a.c.a.g.a ##22 ENSGT00990000203979 ENSGT00940000154285.a.a.e.b ENSGT00390000001505 ENSGT00390000008429.e.a.f ENSGT00940000159711.g.e ENSGT00940000160561.`b ENSGT00390000007160.a.a.p ENSGT00940000155514.c.c.a ENSGT00940000165085.b.a ENSGT00940000163873.c.b ENSGT00940000158890.h.a ENSGT00940000153393.B.g ENSGT01050000244866.D.a.e.a.a ENSGT00390000015137 ENSGT00950000183066.a.b.a.b.l Oncorhynchus ANCESTRAL SPECIES 72 ENSGT00940000160690.j ENSGT00390000017509.d ENSGT00390000003282.B.f.a.a ENSGT00390000000616 ENSGT00950000183160.C ENSGT00940000156199.a.a.d ENSGT00940000156173.k.a ENSGT00940000155356.c.b.b ENSGT00940000157802.v.b ENSGT00940000158909 ENSGT00940000158813.a.a.a ENSGT00390000005351 ENSGT00950000183146.b.b.c ENSGT00940000155781 ENSGT01090000260677 ENSGT01030000234648.a.a.c.a.g.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a.f ENSGT00940000159711.g.e ENSGT00940000160561.`b ENSGT00390000007160.a.a.p ENSGT00940000155514.c.c.a ENSGT00940000165085.b.a ENSGT00940000163873.c.b ENSGT00940000158890.h.a ENSGT00940000153393.B.g ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000155615.i.a.a ENSGT00940000154583.e.b.b.a.a ENSGT00390000013951.jd ENSGT00490000043388.b.a.p Rainbow trout MODERN SPECIES 28 ENSOMYG00000069036 ENSOMYG00000052210 UBE2J2 (ENSOMYG00000039086) ENSOMYG00000075224 ENSOMYG00000039099 ENSOMYG00000039126 ENSOMYG00000054127 ENSOMYG00000039152 lmcd1 (ENSOMYG00000056060) ENSOMYG00000039183 ENSOMYG00000039272 ENSOMYG00000039220 ENSOMYG00000073877 ENSOMYG00000055539 ENSOMYG00000066070 ENSOMYG00000039040 ##22 stl3 (ENSOMYG00000038912) ENSOMYG00000038722 nicn1 (ENSOMYG00000038613) ENSOMYG00000075543 dag1 (ENSOMYG00000038581) ENSOMYG00000076416 ENSOMYG00000072849 ENSOMYG00000069121 pcbp4 (ENSOMYG00000050178) rbm15b (ENSOMYG00000002333) manf (ENSOMYG00000032510) ENSOMYG00000059083 ENSOMYG00000059808 ENSOMYG00000071478 DOCK3 (ENSOMYG00000002166) Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00390000000616 ENSGT00950000183160.C ENSGT00940000156199.a.a.d ENSGT00940000156173.k.a ENSGT00940000155356.c.b.b ENSGT00940000157802.v.b ENSGT00940000158909 ENSGT00940000158813.a.a.a ENSGT00390000005351 ENSGT00950000183146.b.b.c ENSGT00940000155781 ENSGT01090000260677 ENSGT01030000234648.a.a.c.a.g.a ##22 ENSGT00390000001505 ENSGT00390000008429.e.a.f ENSGT00940000159711.g.e ENSGT00940000160561.`b ENSGT00390000007160.a.a.p ENSGT00940000155514.c.c.a ENSGT00940000165085.b.a ENSGT00940000163873.c.b ENSGT00940000158890.h.a ENSGT00940000153393.B.g ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000155615.i.a.a ENSGT00940000154583.e.b.b.a.a ENSGT00390000013951.jd ENSGT00730000111323.e Coho salmon MODERN SPECIES 25 PUSL1 (ENSOKIG00005013381) ACAP3 (ENSOKIG00005013282) ube2j2 (ENSOKIG00005013266) ENSOKIG00005013191 ENSOKIG00005013169 IP6K1 (ENSOKIG00005013157) gmppb (ENSOKIG00005013117) lmcd1 (ENSOKIG00005013092) terf2ip (ENSOKIG00005013076) ENSOKIG00005012672 AMIGO3 (ENSOKIG00005012663) RNF123 (ENSOKIG00005012315) ENSOKIG00005012280 ENSOKIG00005012271 ENSOKIG00005012248 GRM7 (ENSOKIG00005012165) ##22 ENSOKIG00005012128 ENSOKIG00005012064 nicn1 (ENSOKIG00005012037) ENSOKIG00005012019 dag1 (ENSOKIG00005012011) ENSOKIG00005012003 ENSOKIG00005011999 pcbp4 (ENSOKIG00005011989) rbm15b (ENSOKIG00005011984) manf (ENSOKIG00005011974) ENSOKIG00005011951 ENSOKIG00005011918 DOCK3 (ENSOKIG00005009589) ENSOKIG00005009435 ENSOKIG00005009392 Chinook salmon MODERN SPECIES 31 ENSOTSG00005007888 ENSOTSG00005007885 ENSOTSG00005007884 ogna (ENSOTSG00005007883) aspn (ENSOTSG00005007882) ECM2 (ENSOTSG00005007881) pde12 (ENSOTSG00005007880) dennd6aa (ENSOTSG00005007879) slmapa (ENSOTSG00005007756) ube2j2 (ENSOTSG00005007753) ENSOTSG00005007752 RNF123 (ENSOTSG00005005068) ENSOTSG00005005062 lmcd1 (ENSOTSG00005005061) gmppb (ENSOTSG00005005060) GRM7 (ENSOTSG00005005058) ##22 ENSOTSG00005005056 ENSOTSG00005005054 nicn1 (ENSOTSG00005005053) dag1 (ENSOTSG00005005050) ENSOTSG00005005048 ENSOTSG00005005047 rpl32 (ENSOTSG00005005046) sec13 (ENSOTSG00005005010) PDE1B (ENSOTSG00005004341) ENSOTSG00005004333 ITGA7 (ENSOTSG00005002629) bloc1s1 (ENSOTSG00005002607) rdh5 (ENSOTSG00005002601) gls2b (ENSOTSG00005001488) ENSOTSG00005001302 Salmo ANCESTRAL SPECIES 61 ENSGT00940000156027.b.l.b ENSGT00940000160690.j ENSGT00390000017509.c.a ENSGT00390000003282.B.f.a.a ENSGT00390000000616 ENSGT00950000183160.C ENSGT00940000156199.a.a.d ENSGT00940000156173.k.a ENSGT00940000155356.c.b.b ENSGT00940000157802.v.b ENSGT00940000158909 ENSGT00940000158813.a.b ENSGT00390000005351 ENSGT00940000155781 ENSGT00950000183146.b.b.c ENSGT01030000234648.a.a.c.a.g.a ##22 ENSGT00940000154285.a.a.e.b.e.b.b.a ENSGT00940000154285.a.a.e.b.e.b.a.b ENSGT00990000203979 ENSGT00940000154285.a.a.e.b.e.b.b.b.b.a ENSGT00940000154285.a.a.e.b.e.b.b.b.b.b.b ENSGT00390000001505 ENSGT00390000008429.e.a.f ENSGT00990000212314 ENSGT01060000250309.c ENSGT00940000159711.g.e ENSGT00940000160561.`b ENSGT00390000007160.a.a.p ENSGT00940000155514.c.c.a ENSGT00940000165085.b.a ENSGT00940000163873.c.b Atlantic salmon MODERN SPECIES 14 tamm41 (ENSSSAG00000044785) ENSSSAG00000101870 PUSL1 (ENSSSAG00000094446) ENSSSAG00000098650 ENSSSAG00000094825 ube2j2 (ENSSSAG00000024661) ENSSSAG00000027167 ENSSSAG00000042882 ENSSSAG00000042858 ENSSSAG00000042898 lmcd1 (ENSSSAG00000110920) ENSSSAG00000114935 ENSSSAG00000118301 ENSSSAG00000043035 ENSSSAG00000044747 ENSSSAG00000048986 ##22 ENSSSAG00000106337 ENSSSAG00000028428 ENSSSAG00000091555 ENSSSAG00000085882 ENSSSAG00000108089 ENSSSAG00000084518 ENSSSAG00000089967 ENSSSAG00000098521 ENSSSAG00000087297 ENSSSAG00000113919 ENSSSAG00000064892 ENSSSAG00000110432 ENSSSAG00000079097 nicn1 (ENSSSAG00000079158) ENSSSAG00000079162 River trout MODERN SPECIES 7 tamm41 (ENSSTUG00000047582) ENSSTUG00000047590 PUSL1 (ENSSTUG00000047593) acap3b (ENSSTUG00000047629) ENSSTUG00000048389 ube2j2 (ENSSTUG00000048391) ENSSTUG00000048416 im:7152348 (ENSSTUG00000048628) IP6K1 (ENSSTUG00000048632) ENSSTUG00000048636 gmppb (ENSSTUG00000048642) lmcd1 (ENSSTUG00000048646) ENSSTUG00000048652 RNF123 (ENSSTUG00000048705) AMIGO3 (ENSSTUG00000049391) GRM7 (ENSSTUG00000049401) ##22 ENSSTUG00000049449 ENSSTUG00000049491 ENSSTUG00000049501 ENSSTUG00000001845 ENSSTUG00000002865 ENSSTUG00000002952 ENSSTUG00000003030 ENSSTUG00000003252 ENSSTUG00000003503 ENSSTUG00000003520 nicn1 (ENSSTUG00000003559) dag1 (ENSSTUG00000003564) pcbp4 (ENSSTUG00000003579) ENSSTUG00000003599 ENSSTUG00000003606 Huchen MODERN SPECIES 818 ENSHHUG00000051110 ##22 GRM7 (ENSHHUG00000051108) ##22 ENSHHUG00000051048 nicn1 (ENSHHUG00000051040) dag1 (ENSHHUG00000051038) Salmoninae ANCESTRAL SPECIES 101 ENSGT01030000234648.a.a.c.a.g.b ##22 ENSGT00390000008429.e.a.e ENSGT00940000159711.g.f ENSGT00940000160561.ab ENSGT00390000007160.a.a.o ENSGT00940000155514.c.c.b ENSGT00390000005874.j ENSGT00940000165085.b.b ENSGT00440000038003 ENSGT00940000158890.h.b ENSGT00390000017740.a.b ENSGT00940000153393.B.h ENSGT00940000155615.i.a.b ENSGT00940000154583.e.b.b.a.b ENSGT00490000043388.b.a.o ENSGT00730000111323.f Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000157869.e.b ENSGT00940000155306.a.p.a ENSGT00940000157928 ENSGT00940000157238.a.c ENSGT00940000159941.c ENSGT00390000010053.c ENSGT00940000166256.f ENSGT00940000156030.j.i.b ENSGT00940000157262.m.a.a ENSGT00390000007084.m.a ENSGT00940000166500.j.a ENSGT00940000156027.b.l.a ENSGT00940000160690.i ENSGT00390000003282.B.f.a.b ENSGT00950000183146.b.b.d ENSGT01030000234648.a.a.c.a.g.b ##22 ENSGT00390000008429.e.a.e ENSGT00940000159711.g.f ENSGT00940000160561.ab ENSGT00390000007160.a.a.o ENSGT00940000155514.c.c.b ENSGT00390000005874.j ENSGT00940000165085.b.b ENSGT00440000038003 ENSGT00940000158890.h.b ENSGT00390000017740.a.b ENSGT00940000153393.B.h ENSGT00940000155615.i.a.b ENSGT00940000154583.e.b.b.a.b ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000155615.i.a.a Oncorhynchus ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.g.b ##22 Rainbow trout MODERN SPECIES 8 ENSOMYG00000058752 ENSOMYG00000050300 ENSOMYG00000031292 ENSOMYG00000035788 ENSOMYG00000032769 ENSOMYG00000066264 ENSOMYG00000049966 ENSOMYG00000053591 ENSOMYG00000032780 ENSOMYG00000032788 ENSOMYG00000051926 ENSOMYG00000077229 ENSOMYG00000032839 ENSOMYG00000032875 ENSOMYG00000048689 ENSOMYG00000032466 ##22 ENSOMYG00000076952 ENSOMYG00000066382 ENSOMYG00000075932 dag1 (ENSOMYG00000032460) ENSOMYG00000074355 pcbp4 (ENSOMYG00000076872) rbm15b (ENSOMYG00000032495) manf (ENSOMYG00000069831) ENSOMYG00000065223 DOCK3 (ENSOMYG00000032548) ENSOMYG00000032724 ENSOMYG00000064291 ENSOMYG00000057567 ENSOMYG00000061470 ENSOMYG00000066629 Oncorhynchus_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.g.b ##22 Coho salmon MODERN SPECIES ENSOKIG00005001161 SLMAP (ENSOKIG00005001181) ENSOKIG00005001222 ENSOKIG00005001225 ENSOKIG00005001227 acot8 (ENSOKIG00005001233) ENSOKIG00005001243 ENSOKIG00005001248 VGLL4 (ENSOKIG00005001258) ENSOKIG00005001273 IP6K1 (ENSOKIG00005001293) ENSOKIG00005001305 AMIGO3 (ENSOKIG00005001311) ENSOKIG00005001313 ENSOKIG00005001318 GRM7 (ENSOKIG00005001350) ##22 ENSOKIG00005001425 ENSOKIG00005001427 dag1 (ENSOKIG00005001430) pcbp4 (ENSOKIG00005001438) ENSOKIG00005001453 rbm15b (ENSOKIG00005001456) manf (ENSOKIG00005001460) DOCK3 (ENSOKIG00005001972) DCAF1 (ENSOKIG00005009361) ENSOKIG00005009522 rpl32 (ENSOKIG00005009537) cand2 (ENSOKIG00005009619) sec13 (ENSOKIG00005011074) ENSOKIG00005011182 GRIP2 (ENSOKIG00005011407) Salmo ANCESTRAL SPECIES 33 ENSGT00940000156199.a.a.c ENSGT00940000156173.k.b ENSGT00940000155356.c.b.a ENSGT00940000157802.v.a ENSGT00940000158813.b ENSGT00950000183146.b.b.d ENSGT00940000163520.A.a.a.b.e.b ENSGT01030000234648.a.a.c.a.g.b ##22 ENSGT00390000008429.e.a.e ENSGT00940000159711.g.f ENSGT00940000160561.ab ENSGT00390000007160.a.a.o ENSGT00940000155514.c.c.b ENSGT00390000005874.j ENSGT00940000165085.a ENSGT00940000165085.b.b ENSGT00440000038003 ENSGT00940000158890.h.b ENSGT00390000017740.a.b ENSGT00940000153393.B.h ENSGT00940000155615.i.a.b ENSGT00940000154583.e.b.b.a.b ENSGT00390000013951 River trout MODERN SPECIES 5 ENSSTUG00000002897 isy1 (ENSSTUG00000002939) mkrn2 (ENSSTUG00000002950) ENSSTUG00000002981 ENSSTUG00000002984 ENSSTUG00000003006 SYN2 (ENSSTUG00000003068) TIMP4 (ENSSTUG00000003488) ube2j2 (ENSSTUG00000003500) ENSSTUG00000003537 ENSSTUG00000003558 IP6K1 (ENSSTUG00000003604) lmcd1 (ENSSTUG00000003651) AMIGO3 (ENSSTUG00000003671) ENSSTUG00000003676 GRM7 (ENSSTUG00000003695) ##22 dag1 (ENSSTUG00000003927) ENSSTUG00000003934 ENSSTUG00000003955 ENSSTUG00000003963 pcbp4 (ENSSTUG00000003972) ENSSTUG00000004017 rbm15b (ENSSTUG00000004064) manf (ENSSTUG00000004074) DOCK3 (ENSSTUG00000004303) DCAF1 (ENSSTUG00000008140) ENSSTUG00000008255 ENSSTUG00000008262 ENSSTUG00000008271 ENSSTUG00000008279 rpl32 (ENSSTUG00000008287) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000066901 ENSSSAG00000116964 ENSSSAG00000044841 ENSSSAG00000009275 ENSSSAG00000095817 ENSSSAG00000065575 ENSSSAG00000104809 ENSSSAG00000093486 ENSSSAG00000119382 ENSSSAG00000066885 ENSSSAG00000066894 ENSSSAG00000115139 ENSSSAG00000094714 ENSSSAG00000012748 ENSSSAG00000119211 ENSSSAG00000079104 ##22 dag1 (ENSSSAG00000110356) ENSSSAG00000053937 pcbp4 (ENSSSAG00000053929) manf (ENSSSAG00000107019) ENSSSAG00000065584 ENSSSAG00000054650 ENSSSAG00000062654 ENSSSAG00000062932 rpl32 (ENSSSAG00000087271) ENSSSAG00000119644 cand2 (ENSSSAG00000106568) sec13 (ENSSSAG00000106589) ENSSSAG00000006160 ENSSSAG00000039620 ENSSSAG00000042655 Northern pike MODERN SPECIES 16 nudt19 (ENSELUG00000017976) SLC7A9 (ENSELUG00000018001) zgc:165481 (ENSELUG00000001348) cep89 (ENSELUG00000018075) rhpn2 (ENSELUG00000000734) slc7a10a (ENSELUG00000018150) lrp3 (ENSELUG00000018159) ENSELUG00000024795 WDR88 (ENSELUG00000018175) gpatch1 (ENSELUG00000018195) cebpa (ENSELUG00000018222) ENSELUG00000027461 ENSELUG00000026547 cebpg (ENSELUG00000018254) ENSELUG00000028915 GRM7 (ENSELUG00000018296) ##22 nicn1 (ENSELUG00000018350) dag1 (ENSELUG00000030698) ENSELUG00000023027 GBGT1 (ENSELUG00000018166) GBGT1 (ENSELUG00000018112) ENSELUG00000027547 pcbp4 (ENSELUG00000018204) rbm15b (ENSELUG00000000768) manf (ENSELUG00000029649) DOCK3 (ENSELUG00000018356) DCAF1 (ENSELUG00000018442) ENSELUG00000028334 ENSELUG00000018480 ENSELUG00000018500 SSUH2 (ENSELUG00000018514) Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.h ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.h ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.h ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.h ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a.h ##22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 266 ENSOTSG00005014019 ENSOTSG00005014015 ENSOTSG00005014011 ##22 Chinook salmon MODERN SPECIES 11 ENSOTSG00005005211 alas1 (ENSOTSG00005005202) DOCK3 (ENSOTSG00005004638) manf (ENSOTSG00005004628) rbm15b (ENSOTSG00005004627) ENSOTSG00005004624 AMIGO3 (ENSOTSG00005004623) ENSOTSG00005004622 GRM7 (ENSOTSG00005004621) ##22 ENSOTSG00005004618 SMARCD1 (ENSOTSG00005004274) gpd1b (ENSOTSG00005004201) ENSOTSG00005004194 ENSOTSG00005004190 ENSOTSG00005004188 dnase1l4.2 (ENSOTSG00005004183) ccdc51 (ENSOTSG00005004176) mcm2 (ENSOTSG00005003900) zgc:171566 (ENSOTSG00005003894) LSM3 (ENSOTSG00005003892) ENSOTSG00005003890 rpl32 (ENSOTSG00005003887) cand2 (ENSOTSG00005002395) sec13 (ENSOTSG00005002355) Huchen DUPLICATION Huchen MODERN SPECIES 7165 ENSHHUG00000015105 ##22 Huchen MODERN SPECIES 818 ENSHHUG00000051110 ##22 GRM7 (ENSHHUG00000051108) ##22 ENSHHUG00000051048 nicn1 (ENSHHUG00000051040) dag1 (ENSHHUG00000051038) Acanthomorphata ANCESTRAL SPECIES 71 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000171658 Cod MODERN SPECIES 4 ENSGMOG00000036770 ENSGMOG00000011692 ENSGMOG00000011688 eif6 (ENSGMOG00000011684) fam83c (ENSGMOG00000003558) uqcc1 (ENSGMOG00000033876) ENSGMOG00000035556 GDF5 (ENSGMOG00000022945) ENSGMOG00000003404 ENSGMOG00000034142 manf (ENSGMOG00000003389) ENSGMOG00000026672 pcbp4 (ENSGMOG00000028507) ENSGMOG00000003333 nicn1 (ENSGMOG00000016757) ENSGMOG00000013553 ##22 ENSGMOG00000014472 ENSGMOG00000028639 ENSGMOG00000027515 ENSGMOG00000025739 ENSGMOG00000036290 ENSGMOG00000013978 ENSGMOG00000013925 ENSGMOG00000027519 ENSGMOG00000034249 FAM120A (ENSGMOG00000037041) phf2 (ENSGMOG00000004936) ENSGMOG00000022585 barx1 (ENSGMOG00000023980) ptpdc1a (ENSGMOG00000033201) wnt7aa (ENSGMOG00000004893) Euacanthomorphacea ANCESTRAL SPECIES 82 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000171658 Pinecone sodierfish MODERN SPECIES 19 ENSMMDG00005003265 dynlrb2 (ENSMMDG00005003261) map1lc3a (ENSMMDG00005003255) eif6 (ENSMMDG00005003249) MMP24 (ENSMMDG00005003243) fam83c (ENSMMDG00005003239) uqcc1 (ENSMMDG00005003234) GDF5 (ENSMMDG00005003163) sdc4 (ENSMMDG00005003151) oser1 (ENSMMDG00005003145) manf (ENSMMDG00005003139) rbm15b (ENSMMDG00005003136) pcbp4 (ENSMMDG00005003066) dag1 (ENSMMDG00005003054) nicn1 (ENSMMDG00005003047) GRM7 (ENSMMDG00005003020) ##22 ENSMMDG00005002995 AMIGO3 (ENSMMDG00005002992) RNF123 (ENSMMDG00005002933) ENSMMDG00005002891 ENSMMDG00005002881 ENSMMDG00005002875 ENSMMDG00005002868 ENSMMDG00005002864 ENSMMDG00005002858 ENSMMDG00005002855 ENSMMDG00005002849 ENSMMDG00005002841 ENSMMDG00005002834 ENSMMDG00005002826 ENSMMDG00005002815 Percomorphaceae ANCESTRAL SPECIES 33 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000171658 ENSGT00940000178492 ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00940000178764 ENSGT00390000013266 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Eupercaria ANCESTRAL SPECIES ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Eupecaria_A ANCESTRAL SPECIES ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Perciformes ANCESTRAL SPECIES ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Perciformes_a ANCESTRAL SPECIES 41 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 Channel bull blenny MODERN SPECIES 19 DCAF1 (ENSCGOG00000001505) smpd4 (ENSCGOG00000001730) ENSCGOG00000002071 GDF5 (ENSCGOG00000002074) ENSCGOG00000002088 ENSCGOG00000002091 ENSCGOG00000002095 sdc4 (ENSCGOG00000002101) manf (ENSCGOG00000002103) oser1 (ENSCGOG00000002104) ENSCGOG00000002105 dag1 (ENSCGOG00000002107) ENSCGOG00000002112 nicn1 (ENSCGOG00000002116) ENSCGOG00000002121 GRM7 (ENSCGOG00000002126) ##22 ENSCGOG00000002128 ENSCGOG00000002129 ENSCGOG00000002131 Pike perch MODERN SPECIES 344 GRM7 (ENSSLUG00000007597) ##22 ENSSLUG00000007593 ENSSLUG00000007588 ENSSLUG00000007584 Cottioidei ANCESTRAL SPECIES ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b Lumpfish MODERN SPECIES 20 fam83c (ENSCLMG00005020158) uqcc1 (ENSCLMG00005020159) ENSCLMG00005020160 GDF5 (ENSCLMG00005020162) ENSCLMG00005020163 ENSCLMG00005020164 oser1 (ENSCLMG00005020169) manf (ENSCLMG00005020170) rbm15b (ENSCLMG00005020171) pcbp4 (ENSCLMG00005020172) ENSCLMG00005020173 ENSCLMG00005020176 dag1 (ENSCLMG00005020178) ENSCLMG00005020181 nicn1 (ENSCLMG00005020186) GRM7 (ENSCLMG00005020190) ##22 RNF123 (ENSCLMG00005020205) AMIGO3 (ENSCLMG00005020384) ENSCLMG00005020385 ENSCLMG00005020386 Stickleback MODERN SPECIES 17 ENSGACG00000003282 snrpb (ENSGACG00000003262) ctsa (ENSGACG00000003218) ENSGACG00000003210 KCNQ2 (ENSGACG00000003203) ddx27 (ENSGACG00000003177) pltp (ENSGACG00000003124) khk (ENSGACG00000003103) zgc:171566 (ENSGACG00000003065) ENSGACG00000003064 dag1 (ENSGACG00000003062) ENSGACG00000003059 ENSGACG00000003057 nicn1 (ENSGACG00000003054) ENSGACG00000003051 GRM7 (ENSGACG00000003043) ##22 ENSGACG00000003039 AMIGO3 (ENSGACG00000003035) RNF123 (ENSGACG00000003027) ENSGACG00000003025 Eupecaria_C ANCESTRAL SPECIES 41 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Gilthead seabream MODERN SPECIES 20 ENSSAUG00010013948 ENSSAUG00010013858 pcbp4 (ENSSAUG00010013856) ENSSAUG00010013853 manf (ENSSAUG00010013852) ENSSAUG00010013850 rbm15b (ENSSAUG00010013849) ENSSAUG00010013848 ENSSAUG00010013847 ENSSAUG00010013846 ENSSAUG00010013840 dag1 (ENSSAUG00010013837) nicn1 (ENSSAUG00010013835) ENSSAUG00010013832 ENSSAUG00010013831 ENSSAUG00010013830 ##22 ENSSAUG00010013829 AMIGO3 (ENSSAUG00010013828) RNF123 (ENSSAUG00010012258) aldh4a1 (ENSSAUG00010012211) ENSSAUG00010012207 ENSSAUG00010012206 PIK3C2B (ENSSAUG00010009714) FAM107A (ENSSAUG00010009681) mkrn2 (ENSSAUG00010009678) ENSSAUG00010009672 ENSSAUG00010009670 rbm39a (ENSSAUG00010009342) si:ch211-15p9.2 (ENSSAUG00010009338) isy1 (ENSSAUG00010009336) ENSSAUG00010009335 Eupercaria_incertae_sedis ANCESTRAL SPECIES 47 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00940000169528 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a European seabass MODERN SPECIES 10 ENSDLAG00005027215 ENSDLAG00005027533 ENSDLAG00005026913 ENSDLAG00005013997 manf (ENSDLAG00005013998) rbm15b (ENSDLAG00005027466) ENSDLAG00005030138 pcbp4 (ENSDLAG00005003946) ENSDLAG00005034313 ENSDLAG00005004451 nicn1 (ENSDLAG00005004421) ENSDLAG00005030046 ENSDLAG00005005280 ENSDLAG00005030025 ENSDLAG00005025272 ENSDLAG00005025254 ##22 ENSDLAG00005025241 ENSDLAG00005025238 ENSDLAG00005032336 ENSDLAG00005032183 ENSDLAG00005011552 ENSDLAG00005019653 ENSDLAG00005029332 ENSDLAG00005023897 ENSDLAG00005023900 ENSDLAG00005033126 ENSDLAG00005003477 ENSDLAG00005031883 Large yellow croaker MODERN SPECIES 478 GDF5 (ENSLCRG00005004801) ENSLCRG00005004800 ENSLCRG00005004799 SDC4 (ENSLCRG00005004798) oser1 (ENSLCRG00005004797) ENSLCRG00005004796 rbm15b (ENSLCRG00005004794) manf (ENSLCRG00005004793) pcbp4 (ENSLCRG00005004788) dag1 (ENSLCRG00005004787) ENSLCRG00005004784 ENSLCRG00005004781 ENSLCRG00005004778 nicn1 (ENSLCRG00005004775) ENSLCRG00005004770 GRM7 (ENSLCRG00005004674) ##22 ENSLCRG00005004672 ENSLCRG00005004671 mkrn2 (ENSLCRG00005004669) ENSLCRG00005004668 PIK3C2B (ENSLCRG00005004388) ENSLCRG00005004379 ASCL5 (ENSLCRG00005004377) AMIGO3 (ENSLCRG00005004375) RNF123 (ENSLCRG00005001426) si:ch211-15p9.2 (ENSLCRG00005001330) tsen2 (ENSLCRG00005001328) ENSLCRG00005001327 isy1 (ENSLCRG00005001325) ENSLCRG00005001323 ENSLCRG00005001320 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Anabantaria ANCESTRAL SPECIES ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT00390000003839.a ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a Anabantoidei ANCESTRAL SPECIES 1 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00960000191447 ENSGT00940000154468.tb.a ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b ENSGT00390000016206 ENSGT00510000047836 Climbing perch MODERN SPECIES 18 ENSATEG00000008274 ENSATEG00000008320 fam83c (ENSATEG00000008410) uqcc1 (ENSATEG00000008423) GDF5 (ENSATEG00000008437) ENSATEG00000029338 ENSATEG00000008479 manf (ENSATEG00000027289) ENSATEG00000026385 ENSATEG00000028805 pcbp4 (ENSATEG00000008529) ENSATEG00000008577 ENSATEG00000008680 ENSATEG00000025280 ENSATEG00000008720 ENSATEG00000008739 ##22 ENSATEG00000008775 ENSATEG00000026741 ENSATEG00000008817 ENSATEG00000009115 ENSATEG00000009148 ENSATEG00000009200 ENSATEG00000009210 ENSATEG00000009229 ENSATEG00000009337 mkrn2 (ENSATEG00000009352) ENSATEG00000029135 ENSATEG00000028083 ENSATEG00000026035 ENSATEG00000009443 ENSATEG00000009461 Siamese fighting fish MODERN SPECIES 16 map1lc3a (ENSBSLG00000000893) eif6 (ENSBSLG00000000895) MMP24 (ENSBSLG00000001270) fam83c (ENSBSLG00000001335) uqcc1 (ENSBSLG00000001340) ENSBSLG00000001350 GDF5 (ENSBSLG00000001363) ENSBSLG00000001376 oser1 (ENSBSLG00000001381) manf (ENSBSLG00000001389) rbm15b (ENSBSLG00000001399) pcbp4 (ENSBSLG00000001408) pcbp4 (ENSBSLG00000001415) dag1 (ENSBSLG00000001431) nicn1 (ENSBSLG00000001438) GRM7 (ENSBSLG00000001476) ##22 AMIGO3 (ENSBSLG00000002132) aldh4a1 (ENSBSLG00000002311) ASCL5 (ENSBSLG00000002744) ENSBSLG00000002751 PIK3C2B (ENSBSLG00000002809) FAM107A (ENSBSLG00000003040) ENSBSLG00000003042 mkrn2 (ENSBSLG00000003043) ENSBSLG00000003059 ENSBSLG00000003061 ENSBSLG00000003068 rbm39a (ENSBSLG00000003071) ENSBSLG00000003633 isy1 (ENSBSLG00000003665) ENSBSLG00000003723 Zig-zag eel MODERN SPECIES 19 ENSMAMG00000010557 eif6 (ENSMAMG00000010546) ENSMAMG00000010362 ENSMAMG00000022357 fam83c (ENSMAMG00000010316) uqcc1 (ENSMAMG00000010263) GDF5 (ENSMAMG00000010238) ENSMAMG00000026870 ENSMAMG00000010228 manf (ENSMAMG00000010216) ENSMAMG00000010212 pcbp4 (ENSMAMG00000010163) ENSMAMG00000010144 nicn1 (ENSMAMG00000028280) ENSMAMG00000010098 ENSMAMG00000010071 ##22 ENSMAMG00000010042 ENSMAMG00000010034 ENSMAMG00000010030 ENSMAMG00000009949 ENSMAMG00000027797 ENSMAMG00000028140 ENSMAMG00000009874 ENSMAMG00000009865 ENSMAMG00000009790 ENSMAMG00000027632 ENSMAMG00000009756 ENSMAMG00000024966 ENSMAMG00000009733 ENSMAMG00000009683 ENSMAMG00000009666 Carangaria ANCESTRAL SPECIES 3 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000163190.h.a.b ENSGT00940000163190.g.a Carangaria_A ANCESTRAL SPECIES 80 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00940000163190.g.a Seriola ANCESTRAL SPECIES 69 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.b.b.c.b.b.a.a.b ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163190.h.a.b.`b ENSGT00940000163190.h.a.b.ab ENSGT00940000163190.g.a ENSGT00970000193381.a.b.b.c.b.b.a.a.a ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT00390000003839.a Greater amberjack MODERN SPECIES 25 eif6 (ENSSDUG00000017507) MMP24 (ENSSDUG00000017535) fam83c (ENSSDUG00000017583) uqcc1 (ENSSDUG00000017608) GDF5 (ENSSDUG00000017642) ENSSDUG00000017667 ENSSDUG00000017673 oser1 (ENSSDUG00000017683) manf (ENSSDUG00000017693) rbm15b (ENSSDUG00000017706) pcbp4 (ENSSDUG00000017719) dag1 (ENSSDUG00000017738) ENSSDUG00000017755 ENSSDUG00000017791 nicn1 (ENSSDUG00000017805) GRM7 (ENSSDUG00000017828) ##22 ENSSDUG00000017862 RNF123 (ENSSDUG00000017867) AMIGO3 (ENSSDUG00000017937) aldh4a1 (ENSSDUG00000017947) ENSSDUG00000017981 ENSSDUG00000017993 ENSSDUG00000018007 ENSSDUG00000018009 ENSSDUG00000018013 ENSSDUG00000018027 ENSSDUG00000018032 ENSSDUG00000018040 ASCL5 (ENSSDUG00000018046) ENSSDUG00000018049 PIK3C2B (ENSSDUG00000018064) Yellowtail amberjack MODERN SPECIES 3238 ENSSLDG00000007079 ENSSLDG00000007061 ENSSLDG00000007022 ENSSLDG00000006973 ENSSLDG00000006746 dag1 (ENSSLDG00000006683) ENSSLDG00000006660 nicn1 (ENSSLDG00000006629) GRM7 (ENSSLDG00000006579) ##22 ENSSLDG00000006517 Barramundi perch MODERN SPECIES 83 nicn1 (ENSLCAG00010006737) GRM7 (ENSLCAG00010006681) ##22 amph (ENSLCAG00010006618) inhbab (ENSLCAG00010006600) ENSLCAG00010006596 ENSLCAG00010006593 ENSLCAG00010006585 zgc:55781 (ENSLCAG00010006579) dnajc1 (ENSLCAG00010006574) cdh7a (ENSLCAG00010006564) impa1 (ENSLCAG00010006557) IMPA1 (ENSLCAG00010006552) riok1 (ENSLCAG00010006395) rpp40 (ENSLCAG00010006317) CDY1 (ENSLCAG00010006312) ENSLCAG00010006253 opn4.1 (ENSLCAG00010006233) Pleuronectoidei ANCESTRAL SPECIES 31 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000010760.e.a ENSGT00940000154856.A.b.e.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b Turbot MODERN SPECIES 18 EIF6 (ENSSMAG00000005666) ENSSMAG00000005694 fam83c (ENSSMAG00000005791) uqcc1 (ENSSMAG00000005727) GDF5 (ENSSMAG00000005743) ENSSMAG00000027321 manf (ENSSMAG00000030816) ENSSMAG00000035079 pcbp4 (ENSSMAG00000005827) ENSSMAG00000005893 ENSSMAG00000034605 ENSSMAG00000027780 ENSSMAG00000025744 ENSSMAG00000022100 nicn1 (ENSSMAG00000005914) ENSSMAG00000005933 ##22 ENSSMAG00000005990 ENSSMAG00000006132 ENSSMAG00000023613 ENSSMAG00000024919 ENSSMAG00000006159 ENSSMAG00000006185 ENSSMAG00000006226 ENSSMAG00000033433 ENSSMAG00000006350 ENSSMAG00000006394 ENSSMAG00000006406 ENSSMAG00000006440 ENSSMAG00000006499 ENSSMAG00000006527 ENSSMAG00000023429 Tongue sole MODERN SPECIES 2 ENSCSEG00000014248 SEMA3F (ENSCSEG00000014282) CDK18 (ENSCSEG00000014393) ENSCSEG00000014425 MFSD4A (ENSCSEG00000014433) elk4 (ENSCSEG00000014444) ENSCSEG00000014452 nicn1 (ENSCSEG00000014462) ENSCSEG00000014472 dag1 (ENSCSEG00000014484) pcbp4 (ENSCSEG00000014487) rbm15b (ENSCSEG00000014504) DCAF1 (ENSCSEG00000014518) DOCK3 (ENSCSEG00000014636) ENSCSEG00000014720 GRM7 (ENSCSEG00000014789) ##22 ENSCSEG00000014857 YWHAB (ENSCSEG00000015031) RIMS4 (ENSCSEG00000015047) ENSCSEG00000015065 LSM3 (ENSCSEG00000015071) slc6a6b (ENSCSEG00000015077) GRIP2 (ENSCSEG00000015122) zgc:171566 (ENSCSEG00000015237) PTPRT (ENSCSEG00000015248) rspo4 (ENSCSEG00000015270) ENSCSEG00000015279 ENSCSEG00000015288 ripor3 (ENSCSEG00000015298) blcap (ENSCSEG00000015330) ENSCSEG00000015337 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000178764 ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000154468.tb.a Ovalentaria_B ANCESTRAL SPECIES 30 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234583.a.a.c.b.a.a.b.a.b.a.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a Pomacentridae ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.a ##22 Amphiprion ANCESTRAL SPECIES 358 ENSGT01030000234648.a.a.c.a ##22 ENSGT01090000260059.a.b.b.b.a.d.a.a.a.b.a.a.a.b Clown anemonefish MODERN SPECIES 3587 sox1a (ENSAOCG00000014177) ATP11A (ENSAOCG00000014094) ENSAOCG00000013897 ##22 ENSAOCG00000013832 ENSAOCG00000013822 ENSAOCG00000013810 ENSAOCG00000013801 Orange clownfish MODERN SPECIES 20 uqcc1 (ENSAPEG00000023052) ENSAPEG00000023064 GDF5 (ENSAPEG00000023071) ENSAPEG00000023078 sdc4 (ENSAPEG00000023088) oser1 (ENSAPEG00000023096) manf (ENSAPEG00000023114) rbm15b (ENSAPEG00000023123) pcbp4 (ENSAPEG00000023157) ENSAPEG00000023199 ENSAPEG00000023206 dag1 (ENSAPEG00000023264) ENSAPEG00000023275 nicn1 (ENSAPEG00000023299) ENSAPEG00000023309 ENSAPEG00000023380 ##22 ENSAPEG00000023400 ENSAPEG00000023412 ENSAPEG00000023421 ENSAPEG00000023429 ENSAPEG00000023439 ENSAPEG00000023450 ENSAPEG00000023473 pdhb (ENSAPEG00000023492) pxk (ENSAPEG00000023540) HTD2 (ENSAPEG00000023579) rpp14 (ENSAPEG00000023583) ABHD6 (ENSAPEG00000023596) ENSAPEG00000023602 ENSAPEG00000023611 ippk (ENSAPEG00000023634) Bicolor damselfish MODERN SPECIES 1442 GRM7 (ENSSPAG00000002963) ##22 Cichlidae ANCESTRAL SPECIES 39 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b ENSGT01030000234648.a.a.c.a ##22 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b Midas cichlid MODERN SPECIES 673 ENSACIG00000021756 ENSACIG00000021784 ENSACIG00000021794 GRM7 (ENSACIG00000021818) ##22 ENSACIG00000021833 ENSACIG00000021844 ENSACIG00000021848 ENSACIG00000021859 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Nile tilapia MODERN SPECIES 17 ENSONIG00000035143 sdc4 (ENSONIG00000018558) oser1 (ENSONIG00000018557) manf (ENSONIG00000018556) rbm15b (ENSONIG00000029596) ENSONIG00000034637 pcbp4 (ENSONIG00000018552) ENSONIG00000039817 dag1 (ENSONIG00000018551) ENSONIG00000006777 ENSONIG00000034183 nicn1 (ENSONIG00000018549) ENSONIG00000032897 ENSONIG00000028696 ENSONIG00000033125 GRM7 (ENSONIG00000000308) ##22 ENSONIG00000035000 ENSONIG00000043088 AMIGO3 (ENSONIG00000020715) RNF123 (ENSONIG00000000304) aldh4a1 (ENSONIG00000000298) ASCL5 (ENSONIG00000039187) ENSONIG00000029056 FAM107A (ENSONIG00000000289) ENSONIG00000041988 ENSONIG00000042490 mkrn2 (ENSONIG00000000281) ENSONIG00000000280 tsen2 (ENSONIG00000000278) rbm39a (ENSONIG00000000274) si:ch211-15p9.2 (ENSONIG00000000272) Pseudocrenilabrinae_A ANCESTRAL SPECIES 50 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Haplochromini ANCESTRAL SPECIES 55 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a ENSGT00390000014109 Burton s mouthbrooder MODERN SPECIES 603 ENSHBUG00000004668 GRM7 (ENSHBUG00000004739) ##22 ENSHBUG00000004765 AMIGO3 (ENSHBUG00000004768) RNF123 (ENSHBUG00000004853) aldh4a1 (ENSHBUG00000004936) ASCL5 (ENSHBUG00000004951) ENSHBUG00000004958 PIK3C2B (ENSHBUG00000004975) FAM107A (ENSHBUG00000004990) Haplochromini_A ANCESTRAL SPECIES 61 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000181725 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a Haplochromini_B ANCESTRAL SPECIES 74 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000181725 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00950000183041.A.a.a Eastern happy MODERN SPECIES 17 fam83c (ENSACLG00000013293) uqcc1 (ENSACLG00000013297) GDF5 (ENSACLG00000013302) ENSACLG00000013329 ENSACLG00000013332 sdc4 (ENSACLG00000013335) oser1 (ENSACLG00000013344) manf (ENSACLG00000013345) rbm15b (ENSACLG00000013346) pcbp4 (ENSACLG00000013348) dag1 (ENSACLG00000013364) ENSACLG00000013376 ENSACLG00000013525 nicn1 (ENSACLG00000013534) ENSACLG00000013707 GRM7 (ENSACLG00000013783) ##22 ENSACLG00000013886 ENSACLG00000013891 ENSACLG00000013900 RNF123 (ENSACLG00000013912) AMIGO3 (ENSACLG00000014028) ENSACLG00000014039 aldh4a1 (ENSACLG00000014062) ASCL5 (ENSACLG00000014120) ENSACLG00000014134 ENSACLG00000014216 FAM107A (ENSACLG00000014232) mkrn2 (ENSACLG00000014256) MKRN2OS (ENSACLG00000014293) tsen2 (ENSACLG00000014303) rbm39a (ENSACLG00000014339) Zebra mbuna MODERN SPECIES 1108 ENSMZEG00005007920 ENSMZEG00005007940 ENSMZEG00005007954 ENSMZEG00005007971 ENSMZEG00005007991 ENSMZEG00005008007 ENSMZEG00005008037 ENSMZEG00005008042 matn4 (ENSMZEG00005008052) RBPJL (ENSMZEG00005008101) dag1 (ENSMZEG00005008374) ENSMZEG00005008385 ENSMZEG00005008406 nicn1 (ENSMZEG00005008420) ENSMZEG00005008459 GRM7 (ENSMZEG00005008472) ##22 ENSMZEG00005008501 RNF123 (ENSMZEG00005008522) AMIGO3 (ENSMZEG00005008553) aldh4a1 (ENSMZEG00005008572) ASCL5 (ENSMZEG00005008611) ENSMZEG00005008626 KCNQ2 (ENSMZEG00005008656) ddx27 (ENSMZEG00005008750) pltp (ENSMZEG00005008780) khk (ENSMZEG00005008809) pcbp4 (ENSMZEG00005008852) ENSMZEG00005008904 ENSMZEG00005008917 rbm15b (ENSMZEG00005008925) manf (ENSMZEG00005008940) P. nyererei MODERN SPECIES 400 fam83c (ENSPNYG00000019386) uqcc1 (ENSPNYG00000019361) ENSPNYG00000019338 GDF5 (ENSPNYG00000019328) ENSPNYG00000019314 sdc4 (ENSPNYG00000019303) oser1 (ENSPNYG00000019292) manf (ENSPNYG00000019280) rbm15b (ENSPNYG00000019263) pcbp4 (ENSPNYG00000019234) ENSPNYG00000019223 dag1 (ENSPNYG00000019196) nicn1 (ENSPNYG00000019176) ENSPNYG00000019161 ENSPNYG00000019124 GRM7 (ENSPNYG00000019092) ##22 ENSPNYG00000019076 AMIGO3 (ENSPNYG00000019066) RNF123 (ENSPNYG00000018891) aldh4a1 (ENSPNYG00000018832) ASCL5 (ENSPNYG00000018810) ENSPNYG00000018799 PIK3C2B (ENSPNYG00000018722) FAM107A (ENSPNYG00000018703) Lyretail cichlid MODERN SPECIES 374 eif6 (ENSNBRG00000007765) MMP24 (ENSNBRG00000007670) uqcc1 (ENSNBRG00000007619) ENSNBRG00000007604 GDF5 (ENSNBRG00000007588) ENSNBRG00000007566 ENSNBRG00000007560 ENSNBRG00000007553 oser1 (ENSNBRG00000007545) manf (ENSNBRG00000007537) rbm15b (ENSNBRG00000007512) pcbp4 (ENSNBRG00000007475) dag1 (ENSNBRG00000007446) ENSNBRG00000007394 ENSNBRG00000007381 ENSNBRG00000007377 ##22 ENSNBRG00000007363 AMIGO3 (ENSNBRG00000007350) ENSNBRG00000007338 aldh4a1 (ENSNBRG00000007308) ENSNBRG00000007286 ENSNBRG00000007273 PIK3C2B (ENSNBRG00000007196) ENSNBRG00000007180 mkrn2 (ENSNBRG00000007146) MKRN2OS (ENSNBRG00000007129) tsen2 (ENSNBRG00000007105) rbm39a (ENSNBRG00000007057) si:ch211-15p9.2 (ENSNBRG00000007016) ENSNBRG00000006996 isy1 (ENSNBRG00000006974) Atherinomorphae ANCESTRAL SPECIES 29 ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000178764 ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000154468.tb.a Oryzias ANCESTRAL SPECIES 1 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00940000155865.c.b ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00940000158955 ENSGT00940000156616.i ENSGT00940000158289.a.a.d ENSGT00940000177304 ENSGT00390000014507.b ENSGT00940000159692 ENSGT00940000166655.a Oryzias_b ANCESTRAL SPECIES 3 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00940000155865.c.b ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00940000158955 ENSGT00940000156616.i ENSGT00940000158289.a.a.d ENSGT00940000177304 ENSGT00390000014507.b ENSGT00940000159692 ENSGT00940000166655.a Javanese ricefish MODERN SPECIES 19 ENSOJAG00000022411 ENSOJAG00000023350 ENSOJAG00000023757 pdzrn3b (ENSOJAG00000023854) ppp4r2b (ENSOJAG00000023860) gxylt2 (ENSOJAG00000003792) shq1 (ENSOJAG00000003807) ENSOJAG00000003841 RYBP (ENSOJAG00000003861) prok2 (ENSOJAG00000003872) EIF4E3 (ENSOJAG00000003890) dag1 (ENSOJAG00000003940) ENSOJAG00000003948 nicn1 (ENSOJAG00000003956) ENSOJAG00000003991 GRM7 (ENSOJAG00000004119) ##22 ENSOJAG00000004517 ENSOJAG00000004546 RNF123 (ENSOJAG00000004657) AMIGO3 (ENSOJAG00000006140) aldh4a1 (ENSOJAG00000006168) ENSOJAG00000007046 ENSOJAG00000007081 PIK3C2B (ENSOJAG00000007235) ENSOJAG00000009236 apobec2a (ENSOJAG00000009249) cacna1sa (ENSOJAG00000009581) ENSOJAG00000013538 GOLT1A (ENSOJAG00000013546) ENSOJAG00000013553 ENSOJAG00000013598 Indian medaka MODERN SPECIES 8 ENSOMEG00000001158 cntn4 (ENSOMEG00000001171) ENSOMEG00000001186 ENSOMEG00000001197 ENSOMEG00000001211 pdzrn3b (ENSOMEG00000001216) ppp4r2b (ENSOMEG00000001220) gxylt2 (ENSOMEG00000001223) shq1 (ENSOMEG00000001225) RYBP (ENSOMEG00000001230) prok2 (ENSOMEG00000001233) EIF4E3 (ENSOMEG00000001240) ENSOMEG00000001245 dag1 (ENSOMEG00000001249) nicn1 (ENSOMEG00000001258) GRM7 (ENSOMEG00000001268) ##22 ENSOMEG00000001272 ENSOMEG00000001275 AMIGO3 (ENSOMEG00000001277) ENSOMEG00000001281 ENSOMEG00000001284 aldh4a1 (ENSOMEG00000001286) ENSOMEG00000001289 ENSOMEG00000001290 PIK3C2B (ENSOMEG00000001301) ENSOMEG00000001307 apobec2a (ENSOMEG00000001311) cacna1sa (ENSOMEG00000001319) ENSOMEG00000001326 ENSOMEG00000001327 GOLT1A (ENSOMEG00000001331) Oryzias_a ANCESTRAL SPECIES 5 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000158065 ENSGT00940000162859.o ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00940000155865.c.b ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00940000158955 ENSGT00940000156616.i ENSGT00940000158289.a.a.d ENSGT00940000177304 ENSGT00390000014507.b ENSGT00940000159692 ENSGT00940000177827 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000011220 ENSORLG00000029566 ENSORLG00000027420 ENSORLG00000011105 pdzrn3b (ENSORLG00000011027) gxylt2 (ENSORLG00000011004) ppp4r2b (ENSORLG00000010996) shq1 (ENSORLG00000023538) rybpa (ENSORLG00000030260) prok2 (ENSORLG00000026685) EIF4E3 (ENSORLG00000010970) dag1 (ENSORLG00000010935) ENSORLG00000024220 nicn1 (ENSORLG00000010901) ENSORLG00000030265 ENSORLG00000010879 ##22 ENSORLG00000028895 ENSORLG00000010874 ENSORLG00000023877 AMIGO3 (ENSORLG00000010862) RNF123 (ENSORLG00000010855) aldh4a1 (ENSORLG00000010810) ENSORLG00000010785 ENSORLG00000028258 PIK3C2B (ENSORLG00000010776) ENSORLG00000028244 apobec2a (ENSORLG00000010752) ENSORLG00000010732 ENSORLG00000026770 kiss1 (ENSORLG00000025285) ENSORLG00000023879 Chinese medaka MODERN SPECIES 148 GRM7 (ENSOSIG00000018235) ##22 ENSOSIG00000018230 ENSOSIG00000018224 ENSOSIG00000018199 Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.c ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000178764 ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a Aplocheiloidei ANCESTRAL SPECIES 91 ENSGT00940000159941 ENSGT00390000010053 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT00970000193381.a.a.a.a.a.a.a.c ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b Turquoise killifish MODERN SPECIES 1619 dynlrb1 (ENSNFUG00015005981) map1lc3a (ENSNFUG00015005990) EIF6 (ENSNFUG00015006013) fam83c (ENSNFUG00015006022) uqcc1 (ENSNFUG00015006027) ENSNFUG00015006034 GDF5 (ENSNFUG00015006038) sdc4 (ENSNFUG00015006050) C6H20ORF111 (ENSNFUG00015006057) MANF (ENSNFUG00015006067) RBM15B (ENSNFUG00015006075) pcbp4 (ENSNFUG00015006082) DAG1 (ENSNFUG00015006093) NICN1 (ENSNFUG00015006099) GPR4 (ENSNFUG00015006183) GRM7 (ENSNFUG00015006254) ##22 RNF123 (ENSNFUG00015006669) ENSNFUG00015006739 AMIGO3 (ENSNFUG00015006745) ALDH4A1 (ENSNFUG00015006811) ASCL5 (ENSNFUG00015007429) ENSNFUG00015007435 polr2j (ENSNFUG00015007439) DNTTIP1 (ENSNFUG00015007451) PCIF1 (ENSNFUG00015007469) HDHD5 (ENSNFUG00015007526) isy1 (ENSNFUG00015007544) si:ch211-15p9.2 (ENSNFUG00015007591) rbm39a (ENSNFUG00015007623) ENSNFUG00015007827 ENSNFUG00015007831 Mangrove rivulus MODERN SPECIES 762 GRM7 (ENSKMAG00000014399) ##22 Cyprinodontoidei ANCESTRAL SPECIES 46 ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000178764 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00390000014109 Poeciliinae ANCESTRAL SPECIES 31 ENSGT01090000262945 ENSGT00390000015972 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.b ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g.c ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.a ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00390000014109 ENSGT00940000164112.b Poecilia ANCESTRAL SPECIES 25 ENSGT00390000015972 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.b ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.a.b.b ENSGT00940000159711.g.c ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.a ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00940000171658 ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00390000014109 NAME_6 ANCESTRAL SPECIES 534 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.a.b.a.a.b ENSGT00390000001505 ENSGT01030000234648.a.a.c.a ##22 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.a Amazon molly MODERN SPECIES 1108 ENSPFOG00000001102 ##22 ENSPFOG00000000941 Sailfin molly MODERN SPECIES 627 ENSPLAG00000016050 nicn1 (ENSPLAG00000016059) ENSPLAG00000016080 ##22 ENSPLAG00000016095 Guppy MODERN SPECIES 457 ENSPREG00000021622 sdc4 (ENSPREG00000021611) oser1 (ENSPREG00000021592) manf (ENSPREG00000021567) ENSPREG00000021550 ENSPREG00000021537 ENSPREG00000021514 pcbp4 (ENSPREG00000021498) dag1 (ENSPREG00000021495) ENSPREG00000021479 ENSPREG00000021473 nicn1 (ENSPREG00000021466) ENSPREG00000021456 ENSPREG00000021448 ENSPREG00000021445 GRM7 (ENSPREG00000021434) ##22 ENSPREG00000021406 AMIGO3 (ENSPREG00000021377) ENSPREG00000021366 ENSPREG00000021351 ENSPREG00000021340 aldh4a1 (ENSPREG00000021317) ASCL5 (ENSPREG00000021303) ENSPREG00000021293 PIK3C2B (ENSPREG00000021267) FAM107A (ENSPREG00000021220) mkrn2 (ENSPREG00000021199) MKRN2OS (ENSPREG00000021189) ENSPREG00000021166 rbm39a (ENSPREG00000021088) smpd4 (ENSPREG00000020995) Platyfish MODERN SPECIES 12 ENSXMAG00000021972 ippk (ENSXMAG00000004787) ENSXMAG00000029106 ENSXMAG00000004779 map1lc3a (ENSXMAG00000027769) eif6 (ENSXMAG00000004761) ENSXMAG00000028340 MMP24 (ENSXMAG00000004709) fam83c (ENSXMAG00000023922) ENSXMAG00000025716 uqcc1 (ENSXMAG00000012231) GDF5 (ENSXMAG00000012227) pcbp4 (ENSXMAG00000015709) dag1 (ENSXMAG00000012250) nicn1 (ENSXMAG00000024537) GRM7 (ENSXMAG00000015698) ##22 ENSXMAG00000028609 ENSXMAG00000026990 RNF123 (ENSXMAG00000012608) AMIGO3 (ENSXMAG00000010901) aldh4a1 (ENSXMAG00000012583) ASCL5 (ENSXMAG00000024316) ENSXMAG00000027726 PIK3C2B (ENSXMAG00000012532) FAM107A (ENSXMAG00000012529) ENSXMAG00000028757 mkrn2 (ENSXMAG00000012508) MKRN2OS (ENSXMAG00000012504) tsen2 (ENSXMAG00000012479) rbm39a (ENSXMAG00000012463) si:ch211-15p9.2 (ENSXMAG00000012458) NAME_4 ANCESTRAL SPECIES 174 ENSGT01030000234648.a.a.c.a ##22 ENSGT00940000155781.c ENSGT00950000183146.b.b ENSGT00940000155781.d ENSGT00560000077335 ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT00390000003839.a ENSGT00940000178764 ENSGT00390000013266 ENSGT00940000154468.tb.a ENSGT00940000156368.a ENSGT00390000014109 Mummichog MODERN SPECIES 1044 ENSFHEG00000000054 ##22 Sheepshead minnow MODERN SPECIES 1639 GRM7 (ENSCVAG00000002859) ##22 ENSCVAG00000002853 AMIGO3 (ENSCVAG00000002836) Euteleostomi ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Amniota ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Mammalia ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Theria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Eutheria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Carnivora ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Caniformia ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Canidae ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Red fox MODERN SPECIES 5 CHL1 (ENSVVUG00000013809) CNTN6 (ENSVVUG00000013018) CNTN4 (ENSVVUG00000012913) IL5RA (ENSVVUG00000012836) TRNT1 (ENSVVUG00000012810) CRBN (ENSVVUG00000012661) LRRN1 (ENSVVUG00000012640) ENSVVUG00000012624 ENSVVUG00000012619 SUMF1 (ENSVVUG00000012610) ENSVVUG00000011191 ENSVVUG00000009857 BHLHE40 (ENSVVUG00000009777) ARL8B (ENSVVUG00000009760) EDEM1 (ENSVVUG00000009660) ENSVVUG00000009583 ##22 Actinopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b ##22 Euteleosteomorpha ANCESTRAL SPECIES 11 ENSGT00960000192140 ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00550000074784.b.e.b.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.a ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.a ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.a ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.a ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.a ##22 Chinook salmon MODERN SPECIES 17 si:dkey-33c12.12 (ENSOTSG00005034870) ENSOTSG00005034882 ENSOTSG00005034883 TMEM100 (ENSOTSG00005034884) ENSOTSG00005034885 nploc4 (ENSOTSG00005034898) pde6gb (ENSOTSG00005035404) OXLD1 (ENSOTSG00005035407) gprc5c (ENSOTSG00005035409) ENSOTSG00005035415 map2k6 (ENSOTSG00005035420) ENSOTSG00005035422 ENSOTSG00005035427 ENSOTSG00005035429 ENSOTSG00005035430 ENSOTSG00005035435 ##22 KCNJ2 (ENSOTSG00005035437) ENSOTSG00005035439 kcnj2a (ENSOTSG00005035442) KCNJ16 (ENSOTSG00005035446) tvp23b (ENSOTSG00005035449) trim16 (ENSOTSG00005035454) FADS6 (ENSOTSG00005035457) USH1G (ENSOTSG00005035462) OTOP3 (ENSOTSG00005035465) ENSOTSG00005035467 ENSOTSG00005035468 ENSOTSG00005035471 ENSOTSG00005035504 SAMD8 (ENSOTSG00005035505) VDAC2 (ENSOTSG00005035516) Huchen MODERN SPECIES 10907 ENSHHUG00000018907 ##22 Protacanthopterygii ANCESTRAL SPECIES 37 ENSGT00940000156172.a ENSGT00940000162832 ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00550000074784.b.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890.g ENSGT00940000155615.i.b ENSGT00940000154583.e.b.a ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 399 ENSGT00940000158963.b.b.c ENSGT00940000160485.l ENSGT00530000063735.a.a.a ENSGT00950000183146.b.a.d ENSGT01030000234648.a.a.c.b.b.a ##22 ENSGT00390000008429.e.b.b ENSGT00940000159711.h.a ENSGT00940000155514.d.c ENSGT00390000005874.i.g ENSGT00940000158890.g.a ENSGT00940000155615.i.b.d ENSGT00940000154583.e.b.a.a ENSGT00940000157869.f ENSGT00940000155306.a.o.b ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c Salmoninae_a ANCESTRAL SPECIES 128 ENSGT00940000158963.b.b.c ENSGT00940000160485.l ENSGT00530000063735.a.a.a ENSGT00950000183146.b.a.d ENSGT01030000234648.a.a.c.b.b.a ##22 ENSGT00390000008429.e.b.b ENSGT00940000159711.h.a ENSGT00940000155514.d.c ENSGT00390000005874.i.g ENSGT00940000158890.g.a ENSGT00940000155615.i.b.d ENSGT00940000154583.e.b.a.a ENSGT00940000157869.f ENSGT00940000155306.a.o.b ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c Salmo ANCESTRAL SPECIES 39 ENSGT00940000156915.f.a.c ENSGT00390000009491.d.o ENSGT00940000156047.b.c ENSGT00940000158523.c.a.d ENSGT00940000162955 ENSGT00940000164549.a.a.c ENSGT00940000158284.vb.a ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000159597.c ENSGT00940000168452.a ENSGT00940000164282.a.b ENSGT00940000158963.b.b.c ENSGT00940000160485.l ENSGT00530000063735.a.a.a ENSGT00950000183146.b.a.d ENSGT01030000234648.a.a.c.b.b.a ##22 ENSGT00390000008429.e.b.b ENSGT00940000159711.h.a ENSGT00940000155514.d.c ENSGT00940000158890.g.a ENSGT00940000155615.i.b.d ENSGT00940000154583.e.b.a.a ENSGT00940000157869.f ENSGT00940000155306.a.o.b ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c Atlantic salmon MODERN SPECIES 6 WNT7A (ENSSSAG00000083105) ENSSSAG00000007323 fbxw12 (ENSSSAG00000007336) ENSSSAG00000094839 ENSSSAG00000108729 ENSSSAG00000006906 ENSSSAG00000006851 ENSSSAG00000006841 ENSSSAG00000006838 ENSSSAG00000116165 ENSSSAG00000055843 ENSSSAG00000055867 ENSSSAG00000056236 ENSSSAG00000058643 ENSSSAG00000058662 ENSSSAG00000108308 ##22 ENSSSAG00000065466 ENSSSAG00000094119 ENSSSAG00000112079 ENSSSAG00000066300 ENSSSAG00000068534 ENSSSAG00000070250 ENSSSAG00000114249 ENSSSAG00000112610 ENSSSAG00000118089 rbm39b (ENSSSAG00000070289) rh50 (ENSSSAG00000070385) ENSSSAG00000070643 eif2d (ENSSSAG00000077056) MAPK2 (ENSSSAG00000077364) ENSSSAG00000077389 River trout MODERN SPECIES 20 pcmtd2a (ENSSTUG00000021858) MYT1 (ENSSTUG00000021873) porcnl (ENSSTUG00000021920) SUV39H1 (ENSSTUG00000021941) gpr173 (ENSSTUG00000021951) ENSSTUG00000021957 sema3gb (ENSSTUG00000022061) slc38a5b (ENSSTUG00000022985) ccdc22 (ENSSTUG00000023073) nt5dc2 (ENSSTUG00000023248) tbc1d25 (ENSSTUG00000023438) otud5a (ENSSTUG00000023479) USP11 (ENSSTUG00000023543) ENSSTUG00000025917 ENSSTUG00000025953 ENSSTUG00000025974 ##22 DAG1 (ENSSTUG00000026113) pcbp4 (ENSSTUG00000026150) DOCK3 (ENSSTUG00000026492) rpl32 (ENSSTUG00000027756) grip2a (ENSSTUG00000027807) SLC6A6 (ENSSTUG00000028331) ENSSTUG00000029455 YWHAB (ENSSTUG00000029462) or90j1 (ENSSTUG00000029476) rbm39b (ENSSTUG00000029482) ENSSTUG00000029665 ENSSTUG00000029681 eif2d (ENSSTUG00000030030) mapkapk2b (ENSSTUG00000032003) ENSSTUG00000032365 Oncorhynchus ANCESTRAL SPECIES 93 ENSGT00940000160485.l ENSGT00530000063735.a.a.a ENSGT00950000183146.b.a.d ENSGT01030000234648.a.a.c.b.b.a ##22 ENSGT00390000008429.e.b.b ENSGT00940000159711.h.a ENSGT00940000155514.d.c ENSGT00390000005874.i.g ENSGT00940000158890.g.a ENSGT00940000155615.i.b.d ENSGT00940000154583.e.b.a.a ENSGT00940000155306.a.o.b ENSGT00940000157238.b.f ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000160485.l ENSGT00530000063735.a.a.a ENSGT00950000183146.b.a.d ENSGT01030000234648.a.a.c.b.b.a ##22 ENSGT00390000008429.e.b.b ENSGT00940000159711.h.a ENSGT00940000155514.d.c ENSGT00390000005874.i.g ENSGT00940000158890.g.a ENSGT00940000155615.i.b.d ENSGT00940000154583.e.b.a.a ENSGT00940000155306.a.o.b ENSGT00940000157238.b.f ENSGT00390000012445.a.b ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i Coho salmon MODERN SPECIES 8 SHE (ENSOKIG00005020766) pygo2 (ENSOKIG00005020772) cgnb (ENSOKIG00005020778) ENSOKIG00005020846 C1orf43 (ENSOKIG00005020903) ubap2l (ENSOKIG00005020967) hax1 (ENSOKIG00005021990) znf687b (ENSOKIG00005021996) PSMD4 (ENSOKIG00005022033) PIP5K1A (ENSOKIG00005022071) ENSOKIG00005022155 ndufv1 (ENSOKIG00005022193) USP11 (ENSOKIG00005023371) ENSOKIG00005030111 AMIGO3 (ENSOKIG00005030126) ENSOKIG00005030191 ##22 DAG1 (ENSOKIG00005030503) ENSOKIG00005030522 ENSOKIG00005030603 DOCK3 (ENSOKIG00005030656) DCAF1 (ENSOKIG00005031675) ENSOKIG00005031795 GRIP2 (ENSOKIG00005031817) SLC6A6 (ENSOKIG00005031975) ENSOKIG00005032450 OGN (ENSOKIG00005032466) ENSOKIG00005032504 YWHAB (ENSOKIG00005032541) or90j1 (ENSOKIG00005032555) rbm39b (ENSOKIG00005032574) rh50 (ENSOKIG00005032704) Chinook salmon MODERN SPECIES 7 ENSOTSG00005036396 cdv3 (ENSOTSG00005036399) ENSOTSG00005036436 DNAJC13 (ENSOTSG00005036452) ENSOTSG00005036492 lztfl1 (ENSOTSG00005036538) ENSOTSG00005036539 gli3 (ENSOTSG00005036541) prpf4bb (ENSOTSG00005036543) ENSOTSG00005036548 CDH7 (ENSOTSG00005036552) IMPA1 (ENSOTSG00005036553) ENSOTSG00005036554 ENSOTSG00005036556 ENSOTSG00005036557 ENSOTSG00005036562 ##22 DAG1 (ENSOTSG00005037133) pcbp4 (ENSOTSG00005037135) DOCK3 (ENSOTSG00005037141) DCAF1 (ENSOTSG00005037206) rpl32 (ENSOTSG00005037213) grip2a (ENSOTSG00005037215) SLC6A6 (ENSOTSG00005041012) ENSOTSG00005041394 ognb (ENSOTSG00005041397) cyc1 (ENSOTSG00005041465) YWHAB (ENSOTSG00005041470) or90j1 (ENSOTSG00005041472) rbm39b (ENSOTSG00005004633) rh50 (ENSOTSG00005004642) ENSOTSG00005004654 Rainbow trout MODERN SPECIES 30 ENSOMYG00000011746 ENSOMYG00000063079 ENSOMYG00000011780 ENSOMYG00000011830 ENSOMYG00000053066 ENSOMYG00000061894 ETNPPL (ENSOMYG00000011940) OSTC (ENSOMYG00000011859) ENSOMYG00000071635 ENSOMYG00000069026 ENSOMYG00000060123 ENSOMYG00000013090 ENSOMYG00000048382 ENSOMYG00000022625 ENSOMYG00000022636 ENSOMYG00000022819 ##22 ENSOMYG00000023051 ENSOMYG00000047991 ENSOMYG00000023063 ENSOMYG00000023073 ENSOMYG00000065944 ENSOMYG00000024030 rl32 (ENSOMYG00000056816) ENSOMYG00000074423 ENSOMYG00000028407 ENSOMYG00000029980 ENSOMYG00000058292 ENSOMYG00000031367 ENSOMYG00000031380 ENSOMYG00000031424 ENSOMYG00000031450 Huchen MODERN SPECIES 368 otud5a (ENSHHUG00000025967) USP11 (ENSHHUG00000025980) ENSHHUG00000026051 ENSHHUG00000026053 GRM7 (ENSHHUG00000026061) ##22 DAG1 (ENSHHUG00000026178) pcbp4 (ENSHHUG00000026181) DOCK3 (ENSHHUG00000026198) DCAF1 (ENSHHUG00000026997) rpl32 (ENSHHUG00000027022) grip2a (ENSHHUG00000027034) SLC6A6 (ENSHHUG00000027054) ENSHHUG00000027420 ENSHHUG00000027440 YWHAB (ENSHHUG00000027446) rbm39b (ENSHHUG00000027450) ENSHHUG00000027522 eif2d (ENSHHUG00000027638) mapkapk2b (ENSHHUG00000027666) ENSHHUG00000027780 Salmoninae ANCESTRAL SPECIES 462 ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164.c ENSGT00940000156911.j.b ENSGT00940000162992.f ENSGT00940000164164.d ENSGT00940000160406 ENSGT00940000156911.j.a ENSGT00940000162992.e ENSGT00940000158186.g.d ENSGT00390000015162.e.a.b ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a.b ENSGT00950000183146.b.a.c ENSGT01030000234648.a.a.c.b.b.b ##22 Salmoninae_a ANCESTRAL SPECIES 26 ENSGT01070000254296 ENSGT00940000157989.a.b.f ENSGT00940000164164.d ENSGT00940000160406 ENSGT00940000156911.j.a ENSGT00940000162992.e ENSGT00940000158186.g.d ENSGT00390000015162.e.a.b ENSGT00550000074784.b.e.a ENSGT01090000260263.b ENSGT00550000074784.b.e.b.a.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a.b ENSGT00950000183146.b.a.c ENSGT01030000234648.a.a.c.b.b.b ##22 ENSGT00390000008429.e.b.a ENSGT00940000159711.h.b ENSGT00940000155514.d.d.a.a ENSGT00390000005874.i.h ENSGT00940000163873.c.a ENSGT00940000158890.g.b ENSGT00940000155615.i.b.c ENSGT00940000154583.e.b.a.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00940000156286.j ENSGT00510000047225.b Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000156172.a.c ENSGT00940000168127.a.b.d ENSGT01070000254296 ENSGT00940000157989.a.b.f ENSGT00940000164164.d ENSGT00940000160406 ENSGT00940000156911.j.a ENSGT00940000162992.e ENSGT00940000158186.g.d ENSGT00390000015162.e.a.b ENSGT01090000260263.b ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a.b ENSGT00950000183146.b.a.c ENSGT01030000234648.a.a.c.b.b.b ##22 ENSGT00390000008429.e.b.a ENSGT00940000159711.h.b ENSGT00940000155514.d.d.a.a ENSGT00390000005874.i.h ENSGT00940000163873.c.a ENSGT00940000158890.g.b ENSGT00940000155615.i.b.c ENSGT00940000154583.e.b.a.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000158060.h.b ENSGT00940000156172.a.c ENSGT00940000168127.a.b.d ENSGT01070000254296 ENSGT00940000157989.a.b.f ENSGT00940000164164.d ENSGT00940000156911.j.a ENSGT00940000162992.e ENSGT00940000158186.g.d ENSGT00390000015162.e.a.b ENSGT01090000260263.b ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a.b ENSGT00950000183146.b.a.c ENSGT01030000234648.a.a.c.b.b.b ##22 ENSGT00390000008429.e.b.a ENSGT00940000159711.h.b ENSGT00940000155514.d.d.a.a ENSGT00390000005874.i.h ENSGT00940000163873.c.a ENSGT00940000158890.g.b ENSGT00940000155615.i.b.c ENSGT00940000154583.e.b.a.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Chinook salmon MODERN SPECIES 14 DNAJC5 (ENSOTSG00005044904) adrm1 (ENSOTSG00005044900) ENSOTSG00005044898 p4htma (ENSOTSG00005044897) ENSOTSG00005044848 ENSOTSG00005044847 slc17a9b (ENSOTSG00005044846) gid8b (ENSOTSG00005044845) rps23 (ENSOTSG00005044842) ENSOTSG00005044840 DNAH12 (ENSOTSG00005044769) ASB14 (ENSOTSG00005044750) ENSOTSG00005044749 AMIGO3 (ENSOTSG00005044748) ENSOTSG00005044747 ENSOTSG00005044671 ##22 DAG1 (ENSOTSG00005044670) pcbp4 (ENSOTSG00005044669) DOCK3 (ENSOTSG00005044627) DCAF1 (ENSOTSG00005044577) ssuh2rs1 (ENSOTSG00005044573) rpl32 (ENSOTSG00005044572) grip2a (ENSOTSG00005044449) ENSOTSG00005044420 ABTB1 (ENSOTSG00005044418) ENSOTSG00005044417 ENSOTSG00005044415 cers5 (ENSOTSG00005044389) slmapb (ENSOTSG00005044387) abhd6b (ENSOTSG00005044386) kctd6b (ENSOTSG00005044385) Coho salmon MODERN SPECIES 16 ENSOKIG00005020272 nkain4 (ENSOKIG00005020251) ENSOKIG00005020229 YTHDF1 (ENSOKIG00005020191) bhlhe23 (ENSOKIG00005020180) slc17a9b (ENSOKIG00005019977) gid8b (ENSOKIG00005019960) ENSOKIG00005019947 ENSOKIG00005019929 DNAH12 (ENSOKIG00005018693) ASB14 (ENSOKIG00005018598) ENSOKIG00005018584 AMIGO3 (ENSOKIG00005018577) ENSOKIG00005018574 ENSOKIG00005018563 ENSOKIG00005018537 ##22 ENSOKIG00005018530 ##22 DAG1 (ENSOKIG00005018520) PCBP4 (ENSOKIG00005018503) DOCK3 (ENSOKIG00005017476) DCAF1 (ENSOKIG00005015679) ssuh2rs1 (ENSOKIG00005015560) ENSOKIG00005015535 grip2a (ENSOKIG00005013376) ENSOKIG00005013127 ABTB1 (ENSOKIG00005013075) ENSOKIG00005013065 ENSOKIG00005013051 cers5 (ENSOKIG00005012981) slmapb (ENSOKIG00005012966) abhd6b (ENSOKIG00005012954) Rainbow trout MODERN SPECIES 7 ENSOMYG00000035358 ENSOMYG00000077691 NKAIN4 (ENSOMYG00000035363) birc7 (ENSOMYG00000035264) YTHDF1 (ENSOMYG00000035279) bhlhe23 (ENSOMYG00000035305) slc17a9b (ENSOMYG00000035244) gid8b (ENSOMYG00000035218) ENSOMYG00000007307 ENSOMYG00000035205 ENSOMYG00000034764 ENSOMYG00000074003 ENSOMYG00000034481 ENSOMYG00000034473 ENSOMYG00000034456 ENSOMYG00000034426 ##22 ENSOMYG00000034418 ENSOMYG00000034396 ENSOMYG00000024783 ENSOMYG00000020987 ssuh2rs1 (ENSOMYG00000020830) ENSOMYG00000020785 grip2a (ENSOMYG00000020151) ENSOMYG00000019880 ENSOMYG00000038373 ENSOMYG00000038407 ENSOMYG00000038343 ENSOMYG00000038289 slmapb (ENSOMYG00000038216) abhd6b (ENSOMYG00000038205) kctd6b (ENSOMYG00000038189) Salmo ANCESTRAL SPECIES 4 ENSGT00940000162832 ENSGT00940000168127.a.b.d ENSGT01070000254296 ENSGT00940000157989.a.b.f ENSGT00940000164164.d ENSGT00940000156911.j.a ENSGT00940000162992.e ENSGT00940000158186.g.d ENSGT00390000015162.e.a.b ENSGT01090000260263.b ENSGT00550000074784.b.e.b.a.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a.b ENSGT00950000183146.b.a.c ENSGT01030000234648.a.a.c.b.b.b ##22 ENSGT00390000008429.e.b.a ENSGT00940000159711.h.b ENSGT00940000155514.d.d.b ENSGT00390000005874.i.h ENSGT00940000163873.c.a ENSGT00940000158890.g.b ENSGT00940000155615.i.b.c ENSGT00940000154583.e.b.a.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00940000156286.j ENSGT00510000047225.b Atlantic salmon MODERN SPECIES 4 ENSSSAG00000095719 ENSSSAG00000048537 NKAIN4 (ENSSSAG00000090443) ENSSSAG00000117859 ENSSSAG00000048513 YTHDF1 (ENSSSAG00000048494) ENSSSAG00000095820 SLC17A9 (ENSSSAG00000048285) ENSSSAG00000048169 ENSSSAG00000085568 ENSSSAG00000048140 ENSSSAG00000034855 ENSSSAG00000031995 ENSSSAG00000031885 ENSSSAG00000031848 ENSSSAG00000058897 ##22 ENSSSAG00000119859 ENSSSAG00000049216 ENSSSAG00000115257 ENSSSAG00000049250 ENSSSAG00000049367 ENSSSAG00000049897 ssuh2rs1 (ENSSSAG00000056396) ENSSSAG00000056402 grip2a (ENSSSAG00000056549) slc6a6 (ENSSSAG00000068263) ENSSSAG00000068433 ENSSSAG00000068520 ENSSSAG00000068523 ENSSSAG00000068533 slmapb (ENSSSAG00000068554) River trout MODERN SPECIES 23 ENSSTUG00000036234 nkain4 (ENSSTUG00000036197) ENSSTUG00000036186 YTHDF1 (ENSSTUG00000036158) bhlhe23 (ENSSTUG00000028141) slc17a9b (ENSSTUG00000027917) gid8b (ENSSTUG00000027895) rps23 (ENSSTUG00000027873) ENSSTUG00000027860 ENSSTUG00000027857 DNAH12 (ENSSTUG00000023972) ASB14 (ENSSTUG00000023799) ENSSTUG00000023781 AMIGO3 (ENSSTUG00000023775) ENSSTUG00000023768 ENSSTUG00000022981 ##22 DAG1 (ENSSTUG00000022949) pcbp4 (ENSSTUG00000022918) DOCK3 (ENSSTUG00000020371) DCAF1 (ENSSTUG00000019944) ssuh2rs1 (ENSSTUG00000019913) rpl32 (ENSSTUG00000019892) grip2a (ENSSTUG00000019192) ENSSTUG00000018906 ABTB1 (ENSSTUG00000018847) ENSSTUG00000018834 ENSSTUG00000018812 cers5 (ENSSTUG00000018778) slmapb (ENSSTUG00000018772) ENSSTUG00000018762 abhd6b (ENSSTUG00000018747) Huchen MODERN SPECIES 2301 AMIGO3 (ENSHHUG00000037295) GRM7 (ENSHHUG00000036698) ##22 Northern pike MODERN SPECIES 11 ENSELUG00000032694 ZBTB46 (ENSELUG00000001920) ENSELUG00000001919 ENSELUG00000001915 nkain4 (ENSELUG00000001913) birc7 (ENSELUG00000001911) YTHDF1 (ENSELUG00000001906) slc17a9b (ENSELUG00000001179) gid8 (ENSELUG00000001894) RS23 (ENSELUG00000025078) ENSELUG00000001890 DNAH12 (ENSELUG00000001888) ASB14 (ENSELUG00000001880) ENSELUG00000001879 AMIGO3 (ENSELUG00000001875) ENSELUG00000001874 ##22 DAG1 (ENSELUG00000001872) pcbp4 (ENSELUG00000001870) ENSELUG00000028390 DOCK3 (ENSELUG00000001865) DCAF1 (ENSELUG00000001858) ssuh2rs1 (ENSELUG00000001855) rpl32 (ENSELUG00000001851) grip2a (ENSELUG00000001845) ENSELUG00000001837 ABTB1 (ENSELUG00000001833) ENSELUG00000001831 ENSELUG00000001829 cers5 (ENSELUG00000001826) slmapb (ENSELUG00000001822) abhd6b (ENSELUG00000001820) Acanthomorphata ANCESTRAL SPECIES 3 ENSGT01020000230412.B.b.b.b ENSGT00960000192140 ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00940000156286 Cod MODERN SPECIES SAMD10 (ENSGMOG00000026006) ZNF512B (ENSGMOG00000014036) UCKL1 (ENSGMOG00000014000) ENSGMOG00000037013 ENSGMOG00000034129 NKAIN4 (ENSGMOG00000023038) ENSGMOG00000017566 YTHDF1 (ENSGMOG00000017575) bhlhe23 (ENSGMOG00000019833) SLC17A9 (ENSGMOG00000017586) gid8b (ENSGMOG00000023284) ENSGMOG00000017616 ENSGMOG00000017719 ENSGMOG00000017745 ENSGMOG00000037019 ENSGMOG00000017764 ##22 ENSGMOG00000023425 ENSGMOG00000017799 ENSGMOG00000017817 ENSGMOG00000017897 ssuh2rs1 (ENSGMOG00000017954) grip2a (ENSGMOG00000017983) ENSGMOG00000018027 ENSGMOG00000018063 ENSGMOG00000025318 ENSGMOG00000018099 ENSGMOG00000018108 ENSGMOG00000017970 ENSGMOG00000018127 AMPD2 (ENSGMOG00000001039) gnat2 (ENSGMOG00000001067) Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00940000156286 Pinecone sodierfish MODERN SPECIES 21 ZNF512B (ENSMMDG00005019974) uckl1a (ENSMMDG00005019977) ZBTB46 (ENSMMDG00005019979) ENSMMDG00005019980 ENSMMDG00005019981 nkain4 (ENSMMDG00005019982) birc7 (ENSMMDG00005019985) YTHDF1 (ENSMMDG00005019987) bhlhe23 (ENSMMDG00005019989) slc17a9b (ENSMMDG00005019993) gid8b (ENSMMDG00005020002) ENSMMDG00005020005 ASB14 (ENSMMDG00005020006) ENSMMDG00005020008 ENSMMDG00005020011 ENSMMDG00005020014 ##22 DAG1 (ENSMMDG00005020017) pcbp4 (ENSMMDG00005020019) DOCK3 (ENSMMDG00005020039) DCAF1 (ENSMMDG00005020117) ssuh2rs1 (ENSMMDG00005021101) rpl32 (ENSMMDG00005021107) grip2a (ENSMMDG00005021111) SLC6A6 (ENSMMDG00005004419) ABTB1 (ENSMMDG00005010125) dnase1l4.1 (ENSMMDG00005010150) ENSMMDG00005010327 ENSMMDG00005010330 cers5 (ENSMMDG00005010335) slmapb (ENSMMDG00005010392) ENSMMDG00005010393 Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Tiger tail seahorse MODERN SPECIES 148 YTHDF1 (ENSHCOG00000011303) bhlhe23 (ENSHCOG00000011289) slc17a9b (ENSHCOG00000011275) gid8b (ENSHCOG00000011252) ENSHCOG00000011246 ENSHCOG00000011211 ENSHCOG00000011188 ENSHCOG00000011091 ASB14 (ENSHCOG00000011081) ENSHCOG00000011026 ENSHCOG00000000832 ENSHCOG00000010984 ENSHCOG00000010962 ENSHCOG00000010887 ENSHCOG00000010879 GRM7 (ENSHCOG00000010872) ##22 DAG1 (ENSHCOG00000010853) pcbp4 (ENSHCOG00000010838) DOCK3 (ENSHCOG00000010753) ADRM1 (ENSHCOG00000010679) Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Carangaria ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Carangaria_A DUPLICATION Carangaria_A ANCESTRAL SPECIES ENSGT01030000234648.a.a.c.b.c ##22 Barramundi perch MODERN SPECIES 1018 ENSLCAG00010004582 ##22 Carangaria_A ANCESTRAL SPECIES 1 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b.d ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Seriola ANCESTRAL SPECIES 8 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b.d ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Yellowtail amberjack MODERN SPECIES 2466 ENSSLDG00000001169 ENSSLDG00000001140 nkain4 (ENSSLDG00000001106) birc7 (ENSSLDG00000001088) YTHDF1 (ENSSLDG00000001054) bhlhe23 (ENSSLDG00000001025) slc17a9b (ENSSLDG00000000933) gid8b (ENSSLDG00000000903) ENSSLDG00000000869 DNAH12 (ENSSLDG00000000657) ASB14 (ENSSLDG00000000643) ENSSLDG00000000633 AMIGO3 (ENSSLDG00000000623) ENSSLDG00000000559 ##22 Greater amberjack MODERN SPECIES 16 ZNF512B (ENSSDUG00000016057) uckl1a (ENSSDUG00000016009) ZBTB46 (ENSSDUG00000015950) ENSSDUG00000015923 ENSSDUG00000015912 nkain4 (ENSSDUG00000015884) ENSSDUG00000015847 YTHDF1 (ENSSDUG00000015823) bhlhe23 (ENSSDUG00000015792) slc17a9b (ENSSDUG00000015771) gid8b (ENSSDUG00000015750) DNAH12 (ENSSDUG00000015662) ASB14 (ENSSDUG00000015640) ENSSDUG00000015610 AMIGO3 (ENSSDUG00000015601) ENSSDUG00000015574 ##22 DAG1 (ENSSDUG00000015565) pcbp4 (ENSSDUG00000015540) DOCK3 (ENSSDUG00000015437) DCAF1 (ENSSDUG00000015377) ssuh2rs1 (ENSSDUG00000015316) rpl32 (ENSSDUG00000015301) grip2a (ENSSDUG00000015250) SLC6A6 (ENSSDUG00000015221) ABTB1 (ENSSDUG00000015195) dnase1l4.1 (ENSSDUG00000015175) ENSSDUG00000015126 cers5 (ENSSDUG00000015102) slmapb (ENSSDUG00000015040) ENSSDUG00000015012 abhd6b (ENSSDUG00000014988) Barramundi perch MODERN SPECIES 156 uckl1a (ENSLCAG00010014058) ZBTB46 (ENSLCAG00010014102) ENSLCAG00010014106 ENSLCAG00010014109 nkain4 (ENSLCAG00010014110) ENSLCAG00010014118 YTHDF1 (ENSLCAG00010014124) ENSLCAG00010014131 bhlhe23 (ENSLCAG00010014133) slc17a9b (ENSLCAG00010014136) gid8b (ENSLCAG00010014144) DNAH12 (ENSLCAG00010014287) ASB14 (ENSLCAG00010014695) ENSLCAG00010014712 AMIGO3 (ENSLCAG00010014725) ENSLCAG00010014741 ##22 DAG1 (ENSLCAG00010014760) pcbp4 (ENSLCAG00010014770) DOCK3 (ENSLCAG00010014986) RPL32 (ENSLCAG00010015536) DCAF1 (ENSLCAG00010015551) ssuh2rs1 (ENSLCAG00010015561) grip2a (ENSLCAG00010015567) SLC6A6 (ENSLCAG00010015579) ABTB1 (ENSLCAG00010015585) dnase1l4.1 (ENSLCAG00010015594) ENSLCAG00010015629 ENSLCAG00010015716 cers5 (ENSLCAG00010015721) slmapb (ENSLCAG00010015726) abhd6b (ENSLCAG00010015729) Pleuronectoidei ANCESTRAL SPECIES 38 ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Tongue sole MODERN SPECIES 1 ENSCSEG00000021111 BRPF1 (ENSCSEG00000021109) ENSCSEG00000021049 ENSCSEG00000021048 ENSCSEG00000021047 BICD2 (ENSCSEG00000021046) rpl32 (ENSCSEG00000021045) ssuh2rs1 (ENSCSEG00000021044) DCAF1 (ENSCSEG00000021043) DOCK3 (ENSCSEG00000021042) pcbp4 (ENSCSEG00000021041) DAG1 (ENSCSEG00000021039) ENSCSEG00000021037 ENSCSEG00000021036 AMIGO3 (ENSCSEG00000021034) ENSCSEG00000021031 ##22 p4htma (ENSCSEG00000021030) ENSCSEG00000021028 SLC26A6 (ENSCSEG00000021027) samhd1 (ENSCSEG00000021024) snai1b (ENSCSEG00000021022) ENSCSEG00000021021 GGT7 (ENSCSEG00000021018) ENSCSEG00000021017 ENSCSEG00000021013 ENSCSEG00000021012 ENSCSEG00000021010 zhx3b (ENSCSEG00000021007) rab5if (ENSCSEG00000021005) dhx35 (ENSCSEG00000021003) mafba (ENSCSEG00000021002) Turbot MODERN SPECIES 2 ENSSMAG00000008815 snai1b (ENSSMAG00000008834) ENSSMAG00000008850 ENSSMAG00000030879 ENSSMAG00000008945 ENSSMAG00000008964 ENSSMAG00000008990 ENSSMAG00000009025 p4htma (ENSSMAG00000009093) ENSSMAG00000009105 ENSSMAG00000009132 ENSSMAG00000009155 ENSSMAG00000009280 ENSSMAG00000009297 ENSSMAG00000009328 ENSSMAG00000009334 ##22 ENSSMAG00000009365 ENSSMAG00000009392 ENSSMAG00000009438 ENSSMAG00000009582 ssuh2rs1 (ENSSMAG00000009684) ENSSMAG00000009755 grip2a (ENSSMAG00000009770) ENSSMAG00000009831 ENSSMAG00000010191 ENSSMAG00000010267 ENSSMAG00000010312 ENSSMAG00000010365 slmapb (ENSSMAG00000010413) abhd6b (ENSSMAG00000010436) kctd6b (ENSSMAG00000010455) Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Zig-zag eel MODERN SPECIES 21 ZNF512B (ENSMAMG00000010784) UCKL1 (ENSMAMG00000010803) ENSMAMG00000010870 ENSMAMG00000010905 ENSMAMG00000026480 NKAIN4 (ENSMAMG00000025843) birc7 (ENSMAMG00000011053) YTHDF1 (ENSMAMG00000011072) bhlhe23 (ENSMAMG00000011091) SLC17A9 (ENSMAMG00000011102) gid8b (ENSMAMG00000026586) ENSMAMG00000011176 ENSMAMG00000011282 ENSMAMG00000011308 ENSMAMG00000024798 ENSMAMG00000011323 ##22 ENSMAMG00000011352 ENSMAMG00000011364 ENSMAMG00000011404 ENSMAMG00000011514 ssuh2rs1 (ENSMAMG00000011572) ENSMAMG00000011629 grip2a (ENSMAMG00000011644) ENSMAMG00000011665 ENSMAMG00000011705 ENSMAMG00000011752 ENSMAMG00000011759 ENSMAMG00000024625 slmapb (ENSMAMG00000028597) abhd6b (ENSMAMG00000011788) kctd6b (ENSMAMG00000011809) Anabantoidei ANCESTRAL SPECIES 2 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000162832 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Climbing perch MODERN SPECIES 20 ZNF512B (ENSATEG00000005771) UCKL1 (ENSATEG00000005786) ENSATEG00000005808 ENSATEG00000005861 ENSATEG00000028804 NKAIN4 (ENSATEG00000005894) birc7 (ENSATEG00000005945) YTHDF1 (ENSATEG00000005996) bhlhe23 (ENSATEG00000006042) SLC17A9 (ENSATEG00000006063) gid8b (ENSATEG00000006074) ENSATEG00000006089 ENSATEG00000006355 ENSATEG00000006412 ENSATEG00000006422 ENSATEG00000006449 ##22 ENSATEG00000006499 ENSATEG00000006511 ENSATEG00000006559 ENSATEG00000006782 ssuh2rs1 (ENSATEG00000006917) ENSATEG00000027504 grip2a (ENSATEG00000006974) ENSATEG00000007057 ENSATEG00000007113 ENSATEG00000007162 ENSATEG00000007210 ENSATEG00000029859 slmapb (ENSATEG00000007215) abhd6b (ENSATEG00000007229) kctd6b (ENSATEG00000007279) Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 18 SAMD10 (ENSBSLG00000007734) ZNF512B (ENSBSLG00000007600) uckl1a (ENSBSLG00000006855) ZBTB46 (ENSBSLG00000006461) ENSBSLG00000006366 nkain4 (ENSBSLG00000005702) ENSBSLG00000005680 YTHDF1 (ENSBSLG00000005599) bhlhe23 (ENSBSLG00000005571) slc17a9b (ENSBSLG00000004728) gid8b (ENSBSLG00000004718) DNAH12 (ENSBSLG00000004266) ASB14 (ENSBSLG00000004197) AMIGO3 (ENSBSLG00000004176) ENSBSLG00000004171 ##22 ENSBSLG00000004155 ##22 ENSBSLG00000020865 DAG1 (ENSBSLG00000020863) PCBP4 (ENSBSLG00000020860) DCAF1 (ENSBSLG00000020774) ssuh2rs1 (ENSBSLG00000020769) ssuh2rs1 (ENSBSLG00000020764) ssuh2rs1 (ENSBSLG00000020755) rpl32 (ENSBSLG00000020751) grip2a (ENSBSLG00000020718) ENSBSLG00000020678 ABTB1 (ENSBSLG00000020670) ENSBSLG00000020618 ENSBSLG00000020612 cers5 (ENSBSLG00000020609) slmapb (ENSBSLG00000020604) Siamese fighting fish MODERN SPECIES 18 prpf6 (ENSBSLG00000007832) SAMD10 (ENSBSLG00000007734) ZNF512B (ENSBSLG00000007600) uckl1a (ENSBSLG00000006855) ZBTB46 (ENSBSLG00000006461) ENSBSLG00000006366 nkain4 (ENSBSLG00000005702) ENSBSLG00000005680 YTHDF1 (ENSBSLG00000005599) bhlhe23 (ENSBSLG00000005571) slc17a9b (ENSBSLG00000004728) gid8b (ENSBSLG00000004718) DNAH12 (ENSBSLG00000004266) ASB14 (ENSBSLG00000004197) AMIGO3 (ENSBSLG00000004176) ENSBSLG00000004171 ##22 ENSBSLG00000004155 ##22 ENSBSLG00000020865 DAG1 (ENSBSLG00000020863) PCBP4 (ENSBSLG00000020860) DCAF1 (ENSBSLG00000020774) ssuh2rs1 (ENSBSLG00000020769) ssuh2rs1 (ENSBSLG00000020764) ssuh2rs1 (ENSBSLG00000020755) rpl32 (ENSBSLG00000020751) grip2a (ENSBSLG00000020718) ENSBSLG00000020678 ABTB1 (ENSBSLG00000020670) ENSBSLG00000020618 ENSBSLG00000020612 cers5 (ENSBSLG00000020609) Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Tetraodontidae ANCESTRAL SPECIES 2 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000162832 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Fugu MODERN SPECIES 15 uckl1a (ENSTRUG00000004158) ZBTB46 (ENSTRUG00000004720) ENSTRUG00000004851 ENSTRUG00000021157 nkain4 (ENSTRUG00000004880) birc7 (ENSTRUG00000004995) YTHDF1 (ENSTRUG00000005049) bhlhe23 (ENSTRUG00000005237) slc17a9b (ENSTRUG00000022178) gid8b (ENSTRUG00000019737) ENSTRUG00000029506 DNAH12 (ENSTRUG00000021732) ASB14 (ENSTRUG00000025750) ENSTRUG00000006258 AMIGO3 (ENSTRUG00000006467) GRM7 (ENSTRUG00000006490) ##22 DAG1 (ENSTRUG00000023258) pcbp4 (ENSTRUG00000007426) DCAF1 (ENSTRUG00000009124) ssuh2rs1 (ENSTRUG00000009410) rpl32 (ENSTRUG00000025026) grip2a (ENSTRUG00000009566) SLC6A6 (ENSTRUG00000009909) ABTB1 (ENSTRUG00000010087) dnase1l4.1 (ENSTRUG00000010203) ENSTRUG00000010250 ENSTRUG00000031302 cers5 (ENSTRUG00000010435) slmapb (ENSTRUG00000010853) abhd6b (ENSTRUG00000010887) kctd6b (ENSTRUG00000022471) Tetraodon MODERN SPECIES 24 ENSTNIG00000017871 aar2 (ENSTNIG00000017872) prpf6 (ENSTNIG00000017873) SAMD10 (ENSTNIG00000017874) ENSTNIG00000017875 uckl1a (ENSTNIG00000017876) ZBTB46 (ENSTNIG00000017877) ENSTNIG00000017878 bhlhe23 (ENSTNIG00000017879) slc17a9b (ENSTNIG00000017880) gid8b (ENSTNIG00000017881) DNAH12 (ENSTNIG00000017882) ASB14 (ENSTNIG00000000041) ENSTNIG00000017883 AMIGO3 (ENSTNIG00000017884) GRM7 (ENSTNIG00000017885) ##22 DAG1 (ENSTNIG00000017886) pcbp4 (ENSTNIG00000017887) DOCK3 (ENSTNIG00000017888) DCAF1 (ENSTNIG00000017889) ssuh2rs1 (ENSTNIG00000017890) rpl32 (ENSTNIG00000017891) grip2a (ENSTNIG00000017892) SLC6A6 (ENSTNIG00000017893) lipt2 (ENSTNIG00000000434) ABTB1 (ENSTNIG00000017894) dnase1l4.1 (ENSTNIG00000017895) ENSTNIG00000001338 ENSTNIG00000017896 cers5 (ENSTNIG00000017897) slmapb (ENSTNIG00000017898) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Ballan wrasse MODERN SPECIES 26 ENSLBEG00000012196 ENSLBEG00000012158 nkain4 (ENSLBEG00000012122) ENSLBEG00000012104 YTHDF1 (ENSLBEG00000012068) ENSLBEG00000011917 slc17a9b (ENSLBEG00000011823) gid8b (ENSLBEG00000011776) ENSLBEG00000011722 ENSLBEG00000011680 ENSLBEG00000011627 ENSLBEG00000011608 ASB14 (ENSLBEG00000011575) ENSLBEG00000011537 ENSLBEG00000011512 GRM7 (ENSLBEG00000011459) ##22 DAG1 (ENSLBEG00000011422) pcbp4 (ENSLBEG00000011345) DOCK3 (ENSLBEG00000011190) DCAF1 (ENSLBEG00000011078) ssuh2rs1 (ENSLBEG00000010987) ssuh2rs1 (ENSLBEG00000010907) rpl32 (ENSLBEG00000010869) grip2a (ENSLBEG00000010792) SLC6A6 (ENSLBEG00000010687) ABTB1 (ENSLBEG00000010587) dnase1l4.1 (ENSLBEG00000010552) ENSLBEG00000010520 ENSLBEG00000010489 cers5 (ENSLBEG00000010442) slmapb (ENSLBEG00000010394) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Perciformes ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Cottioidei ANCESTRAL SPECIES 2 ENSGT00390000008161.a.a.a.b ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a ENSGT00390000013390 Lumpfish MODERN SPECIES 22 ENSCLMG00005010024 ENSCLMG00005010022 ENSCLMG00005009978 YTHDF1 (ENSCLMG00005009977) bhlhe23 (ENSCLMG00005009975) slc17a9b (ENSCLMG00005009974) gid8b (ENSCLMG00005009973) ENSCLMG00005009972 ENSCLMG00005009971 ENSCLMG00005009969 ENSCLMG00005009965 ASB14 (ENSCLMG00005009961) ENSCLMG00005009959 ENSCLMG00005009958 AMIGO3 (ENSCLMG00005009956) ENSCLMG00005009955 ##22 DAG1 (ENSCLMG00005009954) PCBP4 (ENSCLMG00005009950) DOCK3 (ENSCLMG00005009940) DCAF1 (ENSCLMG00005006838) ssuh2rs1 (ENSCLMG00005006836) ssuh2rs1 (ENSCLMG00005006814) rpl32 (ENSCLMG00005006813) GRIP2 (ENSCLMG00005006810) ENSCLMG00005006809 ENSCLMG00005006808 slmapb (ENSCLMG00005006806) abhd6b (ENSCLMG00005006802) kctd6b (ENSCLMG00005006799) UQCC5 (ENSCLMG00005006798) ognb (ENSCLMG00005006750) Stickleback MODERN SPECIES 11 slc9a8 (ENSGACG00000002558) aar2 (ENSGACG00000002569) prpf6 (ENSGACG00000002576) nkain4 (ENSGACG00000002604) ENSGACG00000002611 YTHDF1 (ENSGACG00000002613) slc17a9b (ENSGACG00000002624) gid8b (ENSGACG00000002635) DNAH12 (ENSGACG00000002639) ASB14 (ENSGACG00000002650) ENSGACG00000002655 ##22 DAG1 (ENSGACG00000002661) pcbp4 (ENSGACG00000002664) DOCK3 (ENSGACG00000002671) DCAF1 (ENSGACG00000002685) ssuh2rs1 (ENSGACG00000002695) ENSGACG00000002699 grip2a (ENSGACG00000002707) SLC6A6 (ENSGACG00000002717) ABTB1 (ENSGACG00000002750) ENSGACG00000002753 ENSGACG00000002756 ENSGACG00000002759 cers5 (ENSGACG00000002760) slmapb (ENSGACG00000002762) abhd6b (ENSGACG00000002777) Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Channel bull blenny MODERN SPECIES 21 ZNF512B (ENSCGOG00000019928) uckl1a (ENSCGOG00000019615) ZBTB46 (ENSCGOG00000019601) ENSCGOG00000019599 ENSCGOG00000019596 nkain4 (ENSCGOG00000019594) birc7 (ENSCGOG00000019592) YTHDF1 (ENSCGOG00000019590) bhlhe23 (ENSCGOG00000019587) slc17a9b (ENSCGOG00000019573) gid8b (ENSCGOG00000019570) DNAH12 (ENSCGOG00000019431) ASB14 (ENSCGOG00000019409) ENSCGOG00000019401 AMIGO3 (ENSCGOG00000019398) ENSCGOG00000019037 ##22 DAG1 (ENSCGOG00000019027) pcbp4 (ENSCGOG00000019022) DOCK3 (ENSCGOG00000015927) DCAF1 (ENSCGOG00000014540) ssuh2rs1 (ENSCGOG00000014511) rpl32 (ENSCGOG00000014501) grip2a (ENSCGOG00000013867) SLC6A6 (ENSCGOG00000013517) ABTB1 (ENSCGOG00000013387) dnase1l4.1 (ENSCGOG00000013382) ENSCGOG00000013376 ENSCGOG00000013373 cers5 (ENSCGOG00000013099) slmapb (ENSCGOG00000013086) abhd6b (ENSCGOG00000013079) Pike perch MODERN SPECIES 31 ZNF512B (ENSSLUG00000005363) uckl1a (ENSSLUG00000005493) ZBTB46 (ENSSLUG00000005620) ENSSLUG00000005654 ENSSLUG00000005666 nkain4 (ENSSLUG00000005673) birc7 (ENSSLUG00000005684) YTHDF1 (ENSSLUG00000005709) bhlhe23 (ENSSLUG00000005736) slc17a9b (ENSSLUG00000005741) gid8b (ENSSLUG00000005750) DNAH12 (ENSSLUG00000005993) ASB14 (ENSSLUG00000010238) ENSSLUG00000010247 AMIGO3 (ENSSLUG00000010252) ENSSLUG00000010323 ##22 DAG1 (ENSSLUG00000011380) pcbp4 (ENSSLUG00000011386) DOCK3 (ENSSLUG00000011554) DCAF1 (ENSSLUG00000014032) ssuh2rs1 (ENSSLUG00000013865) rpl32 (ENSSLUG00000014201) grip2a (ENSSLUG00000014367) SLC6A6 (ENSSLUG00000018278) ABTB1 (ENSSLUG00000020666) ENSSLUG00000020675 ENSSLUG00000020680 cers5 (ENSSLUG00000020690) slmapb (ENSSLUG00000020699) abhd6b (ENSSLUG00000020703) kctd6b (ENSSLUG00000020714) Eupecaria_C ANCESTRAL SPECIES 5 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Gilthead seabream MODERN SPECIES 21 uckl1a (ENSSAUG00010016270) ZBTB46 (ENSSAUG00010016526) ENSSAUG00010016528 ENSSAUG00010016529 nkain4 (ENSSAUG00010016532) ENSSAUG00010016534 birc7 (ENSSAUG00010016535) YTHDF1 (ENSSAUG00010016537) bhlhe23 (ENSSAUG00010016542) slc17a9b (ENSSAUG00010016545) gid8b (ENSSAUG00010016548) DNAH12 (ENSSAUG00010016622) ASB14 (ENSSAUG00010018220) ENSSAUG00010018221 AMIGO3 (ENSSAUG00010018223) ENSSAUG00010018230 ##22 DAG1 (ENSSAUG00010018813) pcbp4 (ENSSAUG00010018816) DOCK3 (ENSSAUG00010018906) DCAF1 (ENSSAUG00010023866) ssuh2rs1 (ENSSAUG00010023883) rpl32 (ENSSAUG00010023884) grip2a (ENSSAUG00010023896) ENSSAUG00010024556 ABTB1 (ENSSAUG00010024559) dnase1l4.1 (ENSSAUG00010024563) ENSSAUG00010024574 ENSSAUG00010024575 cers5 (ENSSAUG00010024578) slmapb (ENSSAUG00010024652) abhd6b (ENSSAUG00010024654) Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000158890 ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b European seabass MODERN SPECIES 14 PRPF6 (ENSDLAG00005009648) SAMD10 (ENSDLAG00005009629) ZNF512B (ENSDLAG00005033527) UCKL1 (ENSDLAG00005009109) ENSDLAG00005009069 ENSDLAG00005031786 ENSDLAG00005026525 NKAIN4 (ENSDLAG00005009020) ENSDLAG00005009007 YTHDF1 (ENSDLAG00005008987) SLC17A9 (ENSDLAG00005008901) GID8 (ENSDLAG00005034283) ENSDLAG00005005473 ENSDLAG00005005328 ENSDLAG00005021998 ENSDLAG00005021585 ##22 ENSDLAG00005026403 ENSDLAG00005021557 ENSDLAG00005020704 ENSDLAG00005020541 ENSDLAG00005020483 ssuh2rs1 (ENSDLAG00005027339) grip2a (ENSDLAG00005019453) ENSDLAG00005019092 ENSDLAG00005019044 ENSDLAG00005019007 ENSDLAG00005018984 ENSDLAG00005027278 ENSDLAG00005030441 slmapb (ENSDLAG00005018921) abhd6b (ENSDLAG00005018910) Large yellow croaker MODERN SPECIES 487 uckl1a (ENSLCRG00005015546) ZBTB46 (ENSLCRG00005015602) ENSLCRG00005015613 ENSLCRG00005015616 nkain4 (ENSLCRG00005015618) ENSLCRG00005015619 YTHDF1 (ENSLCRG00005015620) bhlhe23 (ENSLCRG00005015622) slc17a9b (ENSLCRG00005015623) gid8b (ENSLCRG00005015626) DNAH12 (ENSLCRG00005015635) ASB14 (ENSLCRG00005015648) ENSLCRG00005015649 ENSLCRG00005015651 AMIGO3 (ENSLCRG00005015653) ENSLCRG00005015662 ##22 DAG1 (ENSLCRG00005016344) pcbp4 (ENSLCRG00005016347) DOCK3 (ENSLCRG00005016393) ENSLCRG00005016596 ssuh2rs1 (ENSLCRG00005016622) rpl32 (ENSLCRG00005016623) grip2a (ENSLCRG00005016625) SLC6A6 (ENSLCRG00005016662) ENSLCRG00005017632 ABTB1 (ENSLCRG00005017633) ENSLCRG00005017635 dnase1l4.1 (ENSLCRG00005017638) ENSLCRG00005017639 cers5 (ENSLCRG00005017641) slmapb (ENSLCRG00005017666) Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 344 UCKL1 (ENSSPAG00000003855) ZBTB46 (ENSSPAG00000003827) ENSSPAG00000003787 ENSSPAG00000003757 nkain4 (ENSSPAG00000003733) birc7 (ENSSPAG00000003697) YTHDF1 (ENSSPAG00000003666) bhlhe23 (ENSSPAG00000003632) slc17a9b (ENSSPAG00000003611) gid8b (ENSSPAG00000003590) DNAH12 (ENSSPAG00000003237) ASB14 (ENSSPAG00000003192) ENSSPAG00000003155 AMIGO3 (ENSSPAG00000003144) ENSSPAG00000003135 ##22 ENSSPAG00000003115 ##22 DAG1 (ENSSPAG00000003093) pcbp4 (ENSSPAG00000003033) DOCK3 (ENSSPAG00000002892) DCAF1 (ENSSPAG00000002813) ssuh2rs1 (ENSSPAG00000002781) rpl32 (ENSSPAG00000002762) grip2a (ENSSPAG00000002695) SLC6A6 (ENSSPAG00000002638) ABTB1 (ENSSPAG00000002582) dnase1l4.1 (ENSSPAG00000002569) ENSSPAG00000002555 ENSSPAG00000002542 cers5 (ENSSPAG00000002499) slmapb (ENSSPAG00000002478) Bicolor damselfish MODERN SPECIES 344 UCKL1 (ENSSPAG00000003855) ZBTB46 (ENSSPAG00000003827) ENSSPAG00000003787 ENSSPAG00000003757 nkain4 (ENSSPAG00000003733) birc7 (ENSSPAG00000003697) YTHDF1 (ENSSPAG00000003666) bhlhe23 (ENSSPAG00000003632) slc17a9b (ENSSPAG00000003611) gid8b (ENSSPAG00000003590) DNAH12 (ENSSPAG00000003237) ASB14 (ENSSPAG00000003192) ENSSPAG00000003155 AMIGO3 (ENSSPAG00000003144) ENSSPAG00000003135 ##22 ENSSPAG00000003115 ##22 DAG1 (ENSSPAG00000003093) pcbp4 (ENSSPAG00000003033) DOCK3 (ENSSPAG00000002892) DCAF1 (ENSSPAG00000002813) ssuh2rs1 (ENSSPAG00000002781) rpl32 (ENSSPAG00000002762) grip2a (ENSSPAG00000002695) SLC6A6 (ENSSPAG00000002638) ABTB1 (ENSSPAG00000002582) dnase1l4.1 (ENSSPAG00000002569) ENSSPAG00000002555 ENSSPAG00000002542 cers5 (ENSSPAG00000002499) slmapb (ENSSPAG00000002478) abhd6b (ENSSPAG00000002445) Pomacentridae_A ANCESTRAL SPECIES 12 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Amphiprion ANCESTRAL SPECIES 22 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Clown anemonefish MODERN SPECIES 1407 ZNF512B (ENSAOCG00000012878) uckl1a (ENSAOCG00000012809) ZBTB46 (ENSAOCG00000002510) ENSAOCG00000012696 ENSAOCG00000012666 nkain4 (ENSAOCG00000012648) birc7 (ENSAOCG00000012614) YTHDF1 (ENSAOCG00000012567) bhlhe23 (ENSAOCG00000012515) slc17a9b (ENSAOCG00000012500) gid8b (ENSAOCG00000012455) DNAH12 (ENSAOCG00000012412) ASB14 (ENSAOCG00000012008) ENSAOCG00000011950 AMIGO3 (ENSAOCG00000011915) GRM7 (ENSAOCG00000011894) ##22 Orange clownfish MODERN SPECIES 22 ZNF512B (ENSAPEG00000008457) uckl1a (ENSAPEG00000008498) ZBTB46 (ENSAPEG00000008583) ENSAPEG00000008630 ENSAPEG00000008648 nkain4 (ENSAPEG00000008661) birc7 (ENSAPEG00000008722) YTHDF1 (ENSAPEG00000008750) bhlhe23 (ENSAPEG00000008795) slc17a9b (ENSAPEG00000008809) gid8b (ENSAPEG00000008850) DNAH12 (ENSAPEG00000008904) ASB14 (ENSAPEG00000009406) ENSAPEG00000009461 ENSAPEG00000009473 GRM7 (ENSAPEG00000009483) ##22 DAG1 (ENSAPEG00000009528) pcbp4 (ENSAPEG00000009555) DOCK3 (ENSAPEG00000009614) DCAF1 (ENSAPEG00000009801) ssuh2rs1 (ENSAPEG00000009917) rpl32 (ENSAPEG00000009992) grip2a (ENSAPEG00000010050) SLC6A6 (ENSAPEG00000010135) ABTB1 (ENSAPEG00000010168) ENSAPEG00000010213 ENSAPEG00000010230 cers5 (ENSAPEG00000010240) ENSAPEG00000010285 slmapb (ENSAPEG00000010323) abhd6b (ENSAPEG00000010420) Spiny chromis MODERN SPECIES 122 ZBTB46 (ENSAPOG00000010632) ENSAPOG00000010658 ENSAPOG00000010688 nkain4 (ENSAPOG00000010730) ENSAPOG00000010753 YTHDF1 (ENSAPOG00000010796) bhlhe23 (ENSAPOG00000010832) slc17a9b (ENSAPOG00000010897) gid8b (ENSAPOG00000010926) ENSAPOG00000011018 ENSAPOG00000011058 ENSAPOG00000011118 ASB14 (ENSAPOG00000011144) ENSAPOG00000011155 AMIGO3 (ENSAPOG00000011161) GRM7 (ENSAPOG00000011198) ##22 Cichlidae ANCESTRAL SPECIES ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Midas cichlid MODERN SPECIES 810 ENSACIG00000020007 ENSACIG00000020047 nkain4 (ENSACIG00000020059) birc7 (ENSACIG00000020073) YTHDF1 (ENSACIG00000020083) bhlhe23 (ENSACIG00000020116) slc17a9b (ENSACIG00000020122) gid8b (ENSACIG00000020166) ENSACIG00000020229 ENSACIG00000020262 ENSACIG00000020286 ENSACIG00000020319 ASB14 (ENSACIG00000020333) ENSACIG00000020350 AMIGO3 (ENSACIG00000020397) GRM7 (ENSACIG00000020406) ##22 DAG1 (ENSACIG00000020429) pcbp4 (ENSACIG00000020434) DOCK3 (ENSACIG00000020456) DCAF1 (ENSACIG00000020508) ssuh2rs1 (ENSACIG00000020542) rpl32 (ENSACIG00000020567) grip2a (ENSACIG00000020582) SLC6A6 (ENSACIG00000020614) ABTB1 (ENSACIG00000020639) ENSACIG00000020673 ENSACIG00000020769 cers5 (ENSACIG00000020828) slmapb (ENSACIG00000020857) abhd6b (ENSACIG00000020886) kctd6b (ENSACIG00000020900) Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Nile tilapia MODERN SPECIES 12 ZNF512B (ENSONIG00000017403) uckl1a (ENSONIG00000017401) ZBTB46 (ENSONIG00000017400) ENSONIG00000017399 ENSONIG00000035447 nkain4 (ENSONIG00000042513) birc7 (ENSONIG00000017397) YTHDF1 (ENSONIG00000017396) bhlhe23 (ENSONIG00000021146) slc17a9 (ENSONIG00000031918) gid8b (ENSONIG00000017394) DNAH12 (ENSONIG00000017386) ASB14 (ENSONIG00000031226) ENSONIG00000028082 AMIGO3 (ENSONIG00000021144) GRM7 (ENSONIG00000017384) ##22 DAG1 (ENSONIG00000017382) pcbp4 (ENSONIG00000017378) DOCK3 (ENSONIG00000017366) DCAF1 (ENSONIG00000017362) ssuh2rs1 (ENSONIG00000017360) rpl32 (ENSONIG00000027546) grip2a (ENSONIG00000017348) SLC6A6 (ENSONIG00000017336) ABTB1 (ENSONIG00000017334) dnase1l4.1 (ENSONIG00000017332) ENSONIG00000017331 ENSONIG00000017330 ENSONIG00000035748 cers5 (ENSONIG00000017329) slmapb (ENSONIG00000017328) Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Lyretail cichlid MODERN SPECIES 334 SAMD10 (ENSNBRG00000015080) ZNF512B (ENSNBRG00000015121) uckl1a (ENSNBRG00000015158) ZBTB46 (ENSNBRG00000015250) ENSNBRG00000015263 nkain4 (ENSNBRG00000015278) birc7 (ENSNBRG00000015293) YTHDF1 (ENSNBRG00000015321) bhlhe23 (ENSNBRG00000015361) slc17a9b (ENSNBRG00000015371) gid8b (ENSNBRG00000015403) DNAH12 (ENSNBRG00000015436) ASB14 (ENSNBRG00000015724) ENSNBRG00000015755 AMIGO3 (ENSNBRG00000015829) GRM7 (ENSNBRG00000015838) ##22 DAG1 (ENSNBRG00000015854) pcbp4 (ENSNBRG00000015885) DOCK3 (ENSNBRG00000015912) DCAF1 (ENSNBRG00000016036) ssuh2rs1 (ENSNBRG00000016079) rpl32 (ENSNBRG00000016118) grip2a (ENSNBRG00000016139) SLC6A6 (ENSNBRG00000016196) ABTB1 (ENSNBRG00000016242) ENSNBRG00000016301 ENSNBRG00000016353 cers5 (ENSNBRG00000016400) slmapb (ENSNBRG00000016423) abhd6b (ENSNBRG00000016434) kctd6b (ENSNBRG00000016454) Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Burton s mouthbrooder MODERN SPECIES 404 ZNF512B (ENSHBUG00000004543) uckl1a (ENSHBUG00000000907) ZBTB46 (ENSHBUG00000000118) ENSHBUG00000004743 ENSHBUG00000004772 nkain4 (ENSHBUG00000004813) ENSHBUG00000004843 YTHDF1 (ENSHBUG00000004875) bhlhe23 (ENSHBUG00000004888) slc17a9b (ENSHBUG00000004912) gid8b (ENSHBUG00000004948) DNAH12 (ENSHBUG00000005150) ASB14 (ENSHBUG00000005199) ENSHBUG00000005220 AMIGO3 (ENSHBUG00000005231) GRM7 (ENSHBUG00000005266) ##22 DAG1 (ENSHBUG00000005276) pcbp4 (ENSHBUG00000005329) DOCK3 (ENSHBUG00000005449) DCAF1 (ENSHBUG00000005497) ssuh2rs1 (ENSHBUG00000005551) rpl32 (ENSHBUG00000005568) grip2a (ENSHBUG00000005715) SLC6A6 (ENSHBUG00000005783) ABTB1 (ENSHBUG00000005849) dnase1l4.1 (ENSHBUG00000005887) ENSHBUG00000005901 cers5 (ENSHBUG00000005911) slmapb (ENSHBUG00000005933) abhd6b (ENSHBUG00000005994) kctd6b (ENSHBUG00000006019) Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Zebra mbuna MODERN SPECIES 1103 ZNF512B (ENSMZEG00005023567) uckl1a (ENSMZEG00005023576) ZBTB46 (ENSMZEG00005023581) ENSMZEG00005023584 ENSMZEG00005023587 nkain4 (ENSMZEG00005023588) birc7 (ENSMZEG00005023589) YTHDF1 (ENSMZEG00005023596) bhlhe23 (ENSMZEG00005023601) slc17a9b (ENSMZEG00005023602) gid8b (ENSMZEG00005023605) DNAH12 (ENSMZEG00005023609) ASB14 (ENSMZEG00005023613) ENSMZEG00005023614 AMIGO3 (ENSMZEG00005023620) GRM7 (ENSMZEG00005023623) ##22 DAG1 (ENSMZEG00005023629) pcbp4 (ENSMZEG00005023631) DOCK3 (ENSMZEG00005023635) DCAF1 (ENSMZEG00005023638) ssuh2rs1 (ENSMZEG00005023640) rpl32 (ENSMZEG00005023643) grip2a (ENSMZEG00005023645) SLC6A6 (ENSMZEG00005023650) ABTB1 (ENSMZEG00005023655) dnase1l4.1 (ENSMZEG00005023660) ENSMZEG00005023684 ENSMZEG00005023692 cers5 (ENSMZEG00005023697) slmapb (ENSMZEG00005023701) abhd6b (ENSMZEG00005023704) Eastern happy MODERN SPECIES 12 ZNF512B (ENSACLG00000025773) uckl1a (ENSACLG00000025688) ZBTB46 (ENSACLG00000025648) ENSACLG00000025587 ENSACLG00000025565 nkain4 (ENSACLG00000025545) birc7 (ENSACLG00000025533) YTHDF1 (ENSACLG00000025518) bhlhe23 (ENSACLG00000025505) slc17a9b (ENSACLG00000025475) gid8b (ENSACLG00000025461) DNAH12 (ENSACLG00000025363) ASB14 (ENSACLG00000025342) ENSACLG00000025317 AMIGO3 (ENSACLG00000025313) GRM7 (ENSACLG00000025299) ##22 DAG1 (ENSACLG00000025294) pcbp4 (ENSACLG00000025246) DOCK3 (ENSACLG00000025127) DCAF1 (ENSACLG00000025039) ssuh2rs1 (ENSACLG00000025015) rpl32 (ENSACLG00000025002) grip2a (ENSACLG00000024942) SLC6A6 (ENSACLG00000024933) ABTB1 (ENSACLG00000024910) dnase1l4.1 (ENSACLG00000024909) ENSACLG00000024898 ENSACLG00000024894 cers5 (ENSACLG00000024890) slmapb (ENSACLG00000024880) abhd6b (ENSACLG00000024852) P. nyererei DUPLICATION P. nyererei MODERN SPECIES 395 uckl1a (ENSPNYG00000002074) ZBTB46 (ENSPNYG00000002165) ENSPNYG00000002190 ENSPNYG00000002200 nkain4 (ENSPNYG00000002218) birc7 (ENSPNYG00000002251) YTHDF1 (ENSPNYG00000002266) bhlhe23 (ENSPNYG00000002310) slc17a9b (ENSPNYG00000002335) gid8b (ENSPNYG00000002433) DNAH12 (ENSPNYG00000002500) ASB14 (ENSPNYG00000002934) ENSPNYG00000002950 AMIGO3 (ENSPNYG00000003030) ENSPNYG00000003036 ##22 GRM7 (ENSPNYG00000003049) ##22 DAG1 (ENSPNYG00000003091) pcbp4 (ENSPNYG00000003098) DOCK3 (ENSPNYG00000003175) DCAF1 (ENSPNYG00000003336) ssuh2rs1 (ENSPNYG00000003430) rpl32 (ENSPNYG00000003484) grip2a (ENSPNYG00000003533) SLC6A6 (ENSPNYG00000003688) ABTB1 (ENSPNYG00000003728) ENSPNYG00000003785 ENSPNYG00000003803 ENSPNYG00000003828 cers5 (ENSPNYG00000003886) slmapb (ENSPNYG00000003910) abhd6b (ENSPNYG00000003928) P. nyererei MODERN SPECIES 395 ZNF512B (ENSPNYG00000002032) uckl1a (ENSPNYG00000002074) ZBTB46 (ENSPNYG00000002165) ENSPNYG00000002190 ENSPNYG00000002200 nkain4 (ENSPNYG00000002218) birc7 (ENSPNYG00000002251) YTHDF1 (ENSPNYG00000002266) bhlhe23 (ENSPNYG00000002310) slc17a9b (ENSPNYG00000002335) gid8b (ENSPNYG00000002433) DNAH12 (ENSPNYG00000002500) ASB14 (ENSPNYG00000002934) ENSPNYG00000002950 AMIGO3 (ENSPNYG00000003030) ENSPNYG00000003036 ##22 GRM7 (ENSPNYG00000003049) ##22 DAG1 (ENSPNYG00000003091) pcbp4 (ENSPNYG00000003098) DOCK3 (ENSPNYG00000003175) DCAF1 (ENSPNYG00000003336) ssuh2rs1 (ENSPNYG00000003430) rpl32 (ENSPNYG00000003484) grip2a (ENSPNYG00000003533) SLC6A6 (ENSPNYG00000003688) ABTB1 (ENSPNYG00000003728) ENSPNYG00000003785 ENSPNYG00000003803 ENSPNYG00000003828 cers5 (ENSPNYG00000003886) slmapb (ENSPNYG00000003910) Atherinomorphae ANCESTRAL SPECIES 3 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT00950000182846.a.a.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Mangrove rivulus MODERN SPECIES 32 ZNF512B (ENSKMAG00000017734) uckl1a (ENSKMAG00000017668) ZBTB46 (ENSKMAG00000017612) ENSKMAG00000017568 ENSKMAG00000017542 nkain4 (ENSKMAG00000017510) birc7 (ENSKMAG00000017497) YTHDF1 (ENSKMAG00000017472) bhlhe23 (ENSKMAG00000017420) slc17a9b (ENSKMAG00000017408) gid8b (ENSKMAG00000017372) DNAH12 (ENSKMAG00000017220) ASB14 (ENSKMAG00000017189) ENSKMAG00000017131 AMIGO3 (ENSKMAG00000017120) GRM7 (ENSKMAG00000017090) ##22 DAG1 (ENSKMAG00000017070) Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1624 SAMD10B (ENSNFUG00015015458) ENSNFUG00015015468 ZNF512B (ENSNFUG00015015546) ZBTB46 (ENSNFUG00015015930) ENSNFUG00015015952 ENSNFUG00015015961 NKAIN4 (ENSNFUG00015015973) ENSNFUG00015015980 YTHDF1 (ENSNFUG00015015998) BHLHE23 (ENSNFUG00015016018) ENSNFUG00015016022 SLC17A9B (ENSNFUG00015016037) GID8A (ENSNFUG00015016085) ENSNFUG00015016116 ENSNFUG00015016217 GRM7 (ENSNFUG00015016221) ##22 DAG1 (ENSNFUG00015016234) PCBP4 (ENSNFUG00015016240) DOCK3 (ENSNFUG00015016680) DCAF1 (ENSNFUG00015022532) C3ORF32 (ENSNFUG00015022560) ENSNFUG00015014021 RPL32 (ENSNFUG00015014027) ENSNFUG00015014036 grip2a (ENSNFUG00015014051) SLC6A6 (ENSNFUG00015014254) ENSNFUG00015016795 CERS5 (ENSNFUG00015016810) ENSNFUG00015016819 SLMAPB (ENSNFUG00015016822) abhd6b (ENSNFUG00015016829) Turquoise killifish MODERN SPECIES 195 ENSNFUG00015020586 ASB14 (ENSNFUG00015020569) FAM208AB (ENSNFUG00015020561) ENSNFUG00015020554 ENSNFUG00015020552 ##22 ENSNFUG00015020550 Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 NAME_4 ANCESTRAL SPECIES 87 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00970000193593 ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 Mummichog MODERN SPECIES 2194 ZNF512B (ENSFHEG00000022959) uckl1a (ENSFHEG00000023161) ZBTB46 (ENSFHEG00000023209) ENSFHEG00000000879 ENSFHEG00000023228 nkain4 (ENSFHEG00000002507) birc7 (ENSFHEG00000002526) YTHDF1 (ENSFHEG00000002540) bhlhe23 (ENSFHEG00000002549) slc17a9b (ENSFHEG00000002575) gid8b (ENSFHEG00000002582) DNAH12 (ENSFHEG00000002654) ASB14 (ENSFHEG00000002687) ENSFHEG00000002699 ENSFHEG00000002707 GRM7 (ENSFHEG00000002720) ##22 DAG1 (ENSFHEG00000002732) pcbp4 (ENSFHEG00000002769) DOCK3 (ENSFHEG00000002863) DCAF1 (ENSFHEG00000002932) ssuh2rs1 (ENSFHEG00000002954) grip2a (ENSFHEG00000003023) SLC6A6 (ENSFHEG00000003071) ABTB1 (ENSFHEG00000003100) dnase1l4.1 (ENSFHEG00000003411) ENSFHEG00000003435 RBSN (ENSFHEG00000003446) mrps25 (ENSFHEG00000003470) ENSFHEG00000003455 nr2c2 (ENSFHEG00000003489) wdr46 (ENSFHEG00000003499) Sheepshead minnow MODERN SPECIES 405 GRM7 (ENSCVAG00000013126) ##22 DAG1 (ENSCVAG00000013102) pcbp4 (ENSCVAG00000013090) DOCK3 (ENSCVAG00000012989) DCAF1 (ENSCVAG00000012818) ssuh2rs1 (ENSCVAG00000012652) rpl32 (ENSCVAG00000012560) grip2a (ENSCVAG00000012544) SLC6A6 (ENSCVAG00000012487) ABTB1 (ENSCVAG00000012449) ENSCVAG00000012406 ENSCVAG00000012395 mrps25 (ENSCVAG00000012389) RBSN (ENSCVAG00000012378) nr2c2 (ENSCVAG00000012369) ENSCVAG00000012295 Poeciliinae ANCESTRAL SPECIES 2 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d.a ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 Poecilia ANCESTRAL SPECIES 14 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d.a ENSGT00940000155514.d.b ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 NAME_6 ANCESTRAL SPECIES 105 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000160406 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d.a Amazon molly MODERN SPECIES 341 ZNF512B (ENSPFOG00000006173) uckl1a (ENSPFOG00000005921) ZBTB46 (ENSPFOG00000005845) ENSPFOG00000005737 ENSPFOG00000024056 nkain4 (ENSPFOG00000023974) birc7 (ENSPFOG00000005618) YTHDF1 (ENSPFOG00000005558) bhlhe23 (ENSPFOG00000020648) slc17a9b (ENSPFOG00000005323) gid8b (ENSPFOG00000005244) DNAH12 (ENSPFOG00000003610) ASB14 (ENSPFOG00000003490) ENSPFOG00000021990 AMIGO3 (ENSPFOG00000020647) GRM7 (ENSPFOG00000003136) ##22 DAG1 (ENSPFOG00000003094) pcbp4 (ENSPFOG00000002989) DOCK3 (ENSPFOG00000001524) Sailfin molly MODERN SPECIES 682 slc17a9b (ENSPLAG00000012597) gid8b (ENSPLAG00000012610) DNAH12 (ENSPLAG00000012763) ASB14 (ENSPLAG00000012822) ENSPLAG00000012835 AMIGO3 (ENSPLAG00000012848) GRM7 (ENSPLAG00000012865) ##22 DAG1 (ENSPLAG00000012881) Guppy MODERN SPECIES 459 uckl1a (ENSPREG00000017907) ENSPREG00000017888 ZBTB46 (ENSPREG00000017867) ENSPREG00000017790 ENSPREG00000017768 nkain4 (ENSPREG00000017745) ENSPREG00000017696 YTHDF1 (ENSPREG00000017662) bhlhe23 (ENSPREG00000017659) slc17a9b (ENSPREG00000017625) gid8b (ENSPREG00000017615) DNAH12 (ENSPREG00000017522) ASB14 (ENSPREG00000017491) ENSPREG00000017456 AMIGO3 (ENSPREG00000017444) GRM7 (ENSPREG00000017411) ##22 DAG1 (ENSPREG00000017395) pcbp4 (ENSPREG00000017370) DOCK3 (ENSPREG00000017294) DCAF1 (ENSPREG00000017242) ssuh2rs1 (ENSPREG00000017189) rpl32 (ENSPREG00000017173) grip2a (ENSPREG00000017079) ENSPREG00000017002 ABTB1 (ENSPREG00000016953) dnase1l4.1 (ENSPREG00000016864) ENSPREG00000016784 RBSN (ENSPREG00000016737) mrps25 (ENSPREG00000016711) nr2c2 (ENSPREG00000016689) ENSPREG00000016683 Platyfish MODERN SPECIES uckl1a (ENSXMAG00000015618) ZBTB46 (ENSXMAG00000023594) ENSXMAG00000015632 ENSXMAG00000027553 nkain4 (ENSXMAG00000015634) ENSXMAG00000029538 YTHDF1 (ENSXMAG00000015644) bhlhe23 (ENSXMAG00000019916) slc17a9b (ENSXMAG00000015651) gid8b (ENSXMAG00000015662) DNAH12 (ENSXMAG00000015666) ASB14 (ENSXMAG00000002546) ENSXMAG00000002553 ENSXMAG00000020316 ENSXMAG00000029755 GRM7 (ENSXMAG00000026455) ##22 DAG1 (ENSXMAG00000015708) pcbp4 (ENSXMAG00000024530) DOCK3 (ENSXMAG00000015718) DCAF1 (ENSXMAG00000015781) ssuh2rs1 (ENSXMAG00000015790) rpl32 (ENSXMAG00000021671) grip2a (ENSXMAG00000015803) ENSXMAG00000015832 ABTB1 (ENSXMAG00000015862) dnase1l4.1 (ENSXMAG00000006848) ENSXMAG00000006874 RBSN (ENSXMAG00000015881) mrps25 (ENSXMAG00000023324) nr2c2 (ENSXMAG00000015890) ENSXMAG00000025003 Oryzias ANCESTRAL SPECIES 4 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000159165 ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01030000234515.a.a.a.l ENSGT01100000263573.b.b ENSGT00940000167624 ENSGT00510000047225.b ENSGT00940000157869.e.a Javanese ricefish MODERN SPECIES 21 SAMD10 (ENSOJAG00000004343) ZNF512B (ENSOJAG00000004373) uckl1a (ENSOJAG00000004543) ZBTB46 (ENSOJAG00000004751) ENSOJAG00000004791 ENSOJAG00000004806 nkain4 (ENSOJAG00000004820) ENSOJAG00000004854 YTHDF1 (ENSOJAG00000004893) bhlhe23 (ENSOJAG00000004946) slc17a9b (ENSOJAG00000004967) gid8b (ENSOJAG00000005060) ASB14 (ENSOJAG00000006180) ENSOJAG00000006193 ENSOJAG00000006215 GRM7 (ENSOJAG00000006251) ##22 DAG1 (ENSOJAG00000006431) pcbp4 (ENSOJAG00000006451) DOCK3 (ENSOJAG00000006585) DCAF1 (ENSOJAG00000010754) ssuh2rs1 (ENSOJAG00000010915) rpl32 (ENSOJAG00000010967) grip2a (ENSOJAG00000011304) SLC6A6 (ENSOJAG00000014546) ABTB1 (ENSOJAG00000016146) ENSOJAG00000016299 cers5 (ENSOJAG00000016329) slmapb (ENSOJAG00000016704) abhd6b (ENSOJAG00000016718) kctd6b (ENSOJAG00000016729) UQCC5 (ENSOJAG00000016742) Indian medaka MODERN SPECIES 23 ENSOMEG00000011936 nkain4 (ENSOMEG00000011881) ENSOMEG00000011859 YTHDF1 (ENSOMEG00000011843) bhlhe23 (ENSOMEG00000011815) slc17a9b (ENSOMEG00000011789) gid8b (ENSOMEG00000011743) ENSOMEG00000011723 ENSOMEG00000011707 ENSOMEG00000011692 ENSOMEG00000011671 ENSOMEG00000011649 ASB14 (ENSOMEG00000011633) ENSOMEG00000011608 AMIGO3 (ENSOMEG00000011579) GRM7 (ENSOMEG00000011572) ##22 DAG1 (ENSOMEG00000001024) pcbp4 (ENSOMEG00000011545) DOCK3 (ENSOMEG00000011509) DCAF1 (ENSOMEG00000011453) ssuh2rs1 (ENSOMEG00000011328) rpl32 (ENSOMEG00000011294) grip2a (ENSOMEG00000011272) SLC6A6 (ENSOMEG00000011166) ABTB1 (ENSOMEG00000011096) ENSOMEG00000011046 ENSOMEG00000011022 cers5 (ENSOMEG00000010954) slmapb (ENSOMEG00000010916) abhd6b (ENSOMEG00000010886) kctd6b (ENSOMEG00000010855) Oryzias_a ANCESTRAL SPECIES ENSGT01020000230412.B.b.b.b ENSGT00940000158060 ENSGT00940000162832 ENSGT00940000156172.a ENSGT00940000168127.a.b ENSGT00940000157989.a.b ENSGT00940000164164 ENSGT00940000156911.j ENSGT00940000162992 ENSGT00940000158186.g ENSGT00390000015162.e.a ENSGT00940000154280 ENSGT00940000156550.b ENSGT00530000063735.a.a ENSGT00950000183146.b.a ENSGT01030000234648.a.a.c.b ##22 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a.d ENSGT00940000158890 ENSGT00940000163873.c.a.c ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT01030000234515.a.a.a.l ENSGT00940000167624 ENSGT00510000047225.b Japanese Medaka HdrR MODERN SPECIES 21 UCKL1 (ENSORLG00000009673) ZBTB46 (ENSORLG00000009686) ENSORLG00000029878 ENSORLG00000024967 nkain4 (ENSORLG00000026482) ENSORLG00000009725 YTHDF1 (ENSORLG00000009739) bhlhe23 (ENSORLG00000009742) ENSORLG00000028609 slc17a9b (ENSORLG00000009767) gid8b (ENSORLG00000028791) DNAH12 (ENSORLG00000009821) ASB14 (ENSORLG00000027305) ENSORLG00000009828 ENSORLG00000009831 ENSORLG00000009866 ##22 ENSORLG00000009878 ENSORLG00000009899 ENSORLG00000009964 DCAF1 (ENSORLG00000010003) ssuh2rs1 (ENSORLG00000010022) ssuh2rs1 (ENSORLG00000021847) rpl32 (ENSORLG00000025373) grip2a (ENSORLG00000010075) SLC6A6 (ENSORLG00000010119) ABTB1 (ENSORLG00000010172) CERS5 (ENSORLG00000010219) ENSORLG00000010185 ENSORLG00000027821 slmapb (ENSORLG00000010228) abhd6b (ENSORLG00000010260) Chinese medaka MODERN SPECIES 499 SAMD10 (ENSOSIG00000009263) ZNF512B (ENSOSIG00000009261) uckl1a (ENSOSIG00000008422) ZBTB46 (ENSOSIG00000008408) ENSOSIG00000008406 ENSOSIG00000008405 nkain4 (ENSOSIG00000008404) ENSOSIG00000008401 YTHDF1 (ENSOSIG00000008399) slc17a9b (ENSOSIG00000008388) gid8b (ENSOSIG00000008372) DNAH12 (ENSOSIG00000008150) ASB14 (ENSOSIG00000008141) ENSOSIG00000008137 ENSOSIG00000008134 GRM7 (ENSOSIG00000008053) ##22 DAG1 (ENSOSIG00000008046) pcbp4 (ENSOSIG00000008043) DOCK3 (ENSOSIG00000004617) DCAF1 (ENSOSIG00000004272) ssuh2rs1 (ENSOSIG00000004212) rpl32 (ENSOSIG00000004200) grip2a (ENSOSIG00000004184) SLC6A6 (ENSOSIG00000003815) ABTB1 (ENSOSIG00000003717) ENSOSIG00000023501 ENSOSIG00000023497 cers5 (ENSOSIG00000023495) slmapb (ENSOSIG00000023491) abhd6b (ENSOSIG00000023490) kctd6b (ENSOSIG00000023488) Euteleostomi ANCESTRAL SPECIES 9 ENSGT00940000158813 ENSGT01030000234648.a.a.d ##22 ENSGT00940000157717 ENSGT00940000154861 ENSGT00940000158384 ENSGT00940000155071.E ENSGT00390000008983.a ENSGT00940000162663 ENSGT00940000157154.d ENSGT00940000165984 ENSGT00940000166994 ENSGT00390000016404 ENSGT01050000244882.b.c.a ENSGT00390000009678 ENSGT00940000158065 ENSGT00390000007605 ENSGT00730000111641 Actinopterygii ANCESTRAL SPECIES 257 ENSGT00940000158813 ENSGT01030000234648.a.a.d ##22 ENSGT00940000157717 ENSGT00940000154861 ENSGT00940000158384 ENSGT00940000155071.E ENSGT00390000008983.a ENSGT00940000162663 ENSGT00940000157154.d ENSGT00940000165984 ENSGT00940000166994 ENSGT00390000016404 ENSGT01050000244882.b.c.a ENSGT00390000009678 ENSGT00940000158065 ENSGT00390000007605 Reedfish MODERN SPECIES 9 mrps25 (ENSECRG00000019558) nr2c2 (ENSECRG00000019474) FGD5 (ENSECRG00000019175) ccdc174 (ENSECRG00000019123) atp6ap1lb (ENSECRG00000019045) pde12 (ENSECRG00000019009) ARF4 (ENSECRG00000018935) dennd6aa (ENSECRG00000018889) slmapa (ENSECRG00000018695) FLNB (ENSECRG00000018485) ENSECRG00000018457 DNASE1L3 (ENSECRG00000018431) abhd6b (ENSECRG00000018412) lmcd1 (ENSECRG00000018390) ENSECRG00000018374 GRM7 (ENSECRG00000018263) ##22 edem1 (ENSECRG00000018184) arl8bb (ENSECRG00000018149) bhlhe40 (ENSECRG00000018114) ITPR1 (ENSECRG00000017959) sumf1 (ENSECRG00000017899) setmar (ENSECRG00000017884) lrrn1 (ENSECRG00000017870) ENSECRG00000017858 crbn (ENSECRG00000017838) ENSECRG00000017808 trnt1 (ENSECRG00000017785) vhl (ENSECRG00000017772) ENSECRG00000017747 ghrl (ENSECRG00000017728) ENSECRG00000017709 Neopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Ovalentaria ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Ovalentaria_B ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Pomacentridae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Spiny chromis MODERN SPECIES 1358 ENSAPOG00000011278 ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Aplocheiloidei ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Mangrove rivulus MODERN SPECIES 1487 ENSKMAG00000003498 ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Poeciliinae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Poecilia ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 NAME_6 ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Amazon molly MODERN SPECIES 820 FAM107A (ENSPFOG00000006933) PIK3C2B (ENSPFOG00000006376) ENSPFOG00000024401 ENSPFOG00000024501 aldh4a1 (ENSPFOG00000006130) AMIGO3 (ENSPFOG00000006112) RNF123 (ENSPFOG00000005081) ENSPFOG00000024448 nicn1 (ENSPFOG00000004938) ENSPFOG00000004926 ##22 NAME_4 ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Sheepshead minnow MODERN SPECIES 658 ENSCVAG00000012720 ENSCVAG00000012748 ENSCVAG00000012760 ENSCVAG00000012775 ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Eupercaria ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Perciformes ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Perciformes_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Pike perch MODERN SPECIES 464 ENSSLUG00000019218 ENSSLUG00000019214 ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Huchen MODERN SPECIES 5137 ENSHHUG00000051942 ##22 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00390000013995.b.a ENSGT00390000007605 ENSGT00940000158065 ENSGT00940000162859 ENSGT00950000183062.a.a.a ENSGT00390000009678 ENSGT01050000244882.b.c.a ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873 ENSGT00950000183006.A.a.b ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000155616 ENSGT01010000222866 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000153973 Coelacanth MODERN SPECIES 240 ENSLACG00000007350 TMEM179 (ENSLACG00000008733) KIF26A (ENSLACG00000015005) ARL8B (ENSLACG00000016025) EDEM1 (ENSLACG00000016116) GRM7 (ENSLACG00000017483) ##22 ENSLACG00000018123 LMCD1 (ENSLACG00000018161) SSUH2 (ENSLACG00000018294) ENSLACG00000018315 CAV3 (ENSLACG00000018353) OXTR (ENSLACG00000018362) RAD18 (ENSLACG00000018437) SRGAP3 (ENSLACG00000018512) THUMPD3 (ENSLACG00000018604) vhl (ENSLACG00000018618) ENSLACG00000018645 ENSLACG00000018685 exoc3l1 (ENSLACG00000018701) MATCAP1 (ENSLACG00000018735) ENSLACG00000018753 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873 ENSGT00950000183006.A.a.b ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00390000014874 Anura ANCESTRAL SPECIES 159 ENSGT00940000153541.A ENSGT00940000161454.i.a.b ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00940000163873 ENSGT00950000183006.B.f.b.b.a ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 Frog MODERN SPECIES 4 ENSXETG00000045593 ENSXETG00000042663 cntn4 (ENSXETG00000031338) il5ra (ENSXETG00000032117) trnt1 (ENSXETG00000025091) crbn (ENSXETG00000005146) lrrn1 (ENSXETG00000005147) setmar (ENSXETG00000032592) ENSXETG00000039434 sumf1 (ENSXETG00000005149) itpr1 (ENSXETG00000005153) bhlhe40 (ENSXETG00000035212) arl8b (ENSXETG00000034571) edem1 (ENSXETG00000005217) ENSXETG00000043187 grm7 (ENSXETG00000015711) ##22 ENSXETG00000045616 lmcd1 (ENSXETG00000015748) ENSXETG00000035465 XB5956430 [provisional:ssuh2] (ENSXETG00000015781) ENSXETG00000046985 oxtr (ENSXETG00000001441) cav3.1 (ENSXETG00000046990) rad18 (ENSXETG00000033878) ENSXETG00000049418 srgap3 (ENSXETG00000001445) rpl32 (ENSXETG00000001461) thumpd3 (ENSXETG00000001447) vhl (ENSXETG00000001448) irak2 (ENSXETG00000001449) tatdn2 (ENSXETG00000034509) Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000029766 ENSLLEG00000029776 ENSLLEG00000029788 CNTN4 (ENSLLEG00000029791) ENSLLEG00000029830 TRNT1 (ENSLLEG00000029877) CRBN (ENSLLEG00000030072) LRRN1 (ENSLLEG00000030088) ENSLLEG00000030102 SUMF1 (ENSLLEG00000014064) ITPR1 (ENSLLEG00000014236) ENSLLEG00000017319 BHLHE40 (ENSLLEG00000017398) ARL8B (ENSLLEG00000017797) EDEM1 (ENSLLEG00000017941) GRM7 (ENSLLEG00000018177) ##22 LMCD1 (ENSLLEG00000018847) ENSLLEG00000019021 ENSLLEG00000019153 ENSLLEG00000019332 OXTR (ENSLLEG00000019366) RAD18 (ENSLLEG00000019425) ENSLLEG00000019942 SRGAP3 (ENSLLEG00000019969) TPR (ENSLLEG00000020224) ODR4 (ENSLLEG00000021599) PDC (ENSLLEG00000021813) ENSLLEG00000021850 PTGS2 (ENSLLEG00000021891) PLA2G4A (ENSLLEG00000022334) ENSLLEG00000023172 Amniota ANCESTRAL SPECIES 22 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873 ENSGT00950000183006.A.a.b ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b Sauria ANCESTRAL SPECIES 13 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00390000003937 ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b Lepidosauria ANCESTRAL SPECIES 14 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b tuatara MODERN SPECIES 15 ENSSPUG00000005522 ##22 ENSSPUG00000005505 ##22 Episquamata ANCESTRAL SPECIES 4 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 Laterata ANCESTRAL SPECIES 1 ENSGT00950000183062.a.a.a ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000004270 ##22 ENSSMRG00000004268 ##22 ENSSMRG00000003457 ##22 LMCD1 (ENSSMRG00000003391) SSUH2 (ENSSMRG00000003378) ENSSMRG00000003373 ENSSMRG00000003343 ENSSMRG00000003335 OXTR (ENSSMRG00000003334) RAD18 (ENSSMRG00000003315) ENSSMRG00000003306 SRGAP3 (ENSSMRG00000003257) THUMPD3 (ENSSMRG00000003192) ENSSMRG00000003190 IRAK2 (ENSSMRG00000003184) TATDN2 (ENSSMRG00000003178) GHRL (ENSSMRG00000003101) Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000004270 ##22 ENSSMRG00000004268 ##22 ENSSMRG00000003457 ##22 LMCD1 (ENSSMRG00000003391) SSUH2 (ENSSMRG00000003378) ENSSMRG00000003373 ENSSMRG00000003343 ENSSMRG00000003335 OXTR (ENSSMRG00000003334) RAD18 (ENSSMRG00000003315) ENSSMRG00000003306 SRGAP3 (ENSSMRG00000003257) THUMPD3 (ENSSMRG00000003192) ENSSMRG00000003190 IRAK2 (ENSSMRG00000003184) TATDN2 (ENSSMRG00000003178) Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000004270 ##22 ENSSMRG00000004268 ##22 ENSSMRG00000003457 ##22 LMCD1 (ENSSMRG00000003391) SSUH2 (ENSSMRG00000003378) ENSSMRG00000003373 ENSSMRG00000003343 ENSSMRG00000003335 OXTR (ENSSMRG00000003334) RAD18 (ENSSMRG00000003315) ENSSMRG00000003306 SRGAP3 (ENSSMRG00000003257) THUMPD3 (ENSSMRG00000003192) ENSSMRG00000003190 IRAK2 (ENSSMRG00000003184) TATDN2 (ENSSMRG00000003178) GHRL (ENSSMRG00000003101) SEC13 (ENSSMRG00000003096) Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 10 CNTN4 (ENSPMRG00000014619) ENSPMRG00000014615 TRNT1 (ENSPMRG00000014610) CRBN (ENSPMRG00000014605) LRRN1 (ENSPMRG00000014601) ENSPMRG00000014598 ENSPMRG00000014589 ENSPMRG00000014584 SUMF1 (ENSPMRG00000014573) ITPR1 (ENSPMRG00000006931) BHLHE40 (ENSPMRG00000005541) ARL8B (ENSPMRG00000005530) EDEM1 (ENSPMRG00000005413) ENSPMRG00000005385 ENSPMRG00000005378 ENSPMRG00000005371 ##22 ENSPMRG00000005362 ##22 ENSPMRG00000005354 LMCD1 (ENSPMRG00000005344) SSUH2 (ENSPMRG00000005332) ENSPMRG00000005319 OXTR (ENSPMRG00000005313) RAD18 (ENSPMRG00000005296) ENSPMRG00000005292 SRGAP3 (ENSPMRG00000005264) THUMPD3 (ENSPMRG00000005254) ENSPMRG00000005246 IRAK2 (ENSPMRG00000005238) TATDN2 (ENSPMRG00000005231) GHRL (ENSPMRG00000005213) SEC13 (ENSPMRG00000005203) Common wall lizard MODERN SPECIES 10 ENSPMRG00000014615 TRNT1 (ENSPMRG00000014610) CRBN (ENSPMRG00000014605) LRRN1 (ENSPMRG00000014601) ENSPMRG00000014598 ENSPMRG00000014589 ENSPMRG00000014584 SUMF1 (ENSPMRG00000014573) ITPR1 (ENSPMRG00000006931) BHLHE40 (ENSPMRG00000005541) ARL8B (ENSPMRG00000005530) EDEM1 (ENSPMRG00000005413) ENSPMRG00000005385 ENSPMRG00000005378 ENSPMRG00000005371 ##22 ENSPMRG00000005362 ##22 ENSPMRG00000005354 LMCD1 (ENSPMRG00000005344) SSUH2 (ENSPMRG00000005332) ENSPMRG00000005319 OXTR (ENSPMRG00000005313) RAD18 (ENSPMRG00000005296) ENSPMRG00000005292 SRGAP3 (ENSPMRG00000005264) THUMPD3 (ENSPMRG00000005254) ENSPMRG00000005246 IRAK2 (ENSPMRG00000005238) TATDN2 (ENSPMRG00000005231) GHRL (ENSPMRG00000005213) SEC13 (ENSPMRG00000005203) CAND2 (ENSPMRG00000005087) Toxicofera ANCESTRAL SPECIES 3 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT01030000235965 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b Elapidae ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a.s ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT01030000235965 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 Elapidae_a ANCESTRAL SPECIES 8 ENSGT00950000183062.a.a.a.s ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a.c ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616.e ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 ENSGT00530000063687.a Blue-lipped sea krait MODERN SPECIES 10780 ENSLLTG00000011298 ##22 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00950000183062.a.a.a.s ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E.m.a ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.k ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a.c ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616.e ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 ENSGT00530000063687.a Eastern brown snake MODERN SPECIES 3 PDZRN3 (ENSPTXG00000000135) CNTN3 (ENSPTXG00000000180) CHL1 (ENSPTXG00000000274) ENSPTXG00000000362 CNTN4 (ENSPTXG00000000390) TRNT1 (ENSPTXG00000000410) CRBN (ENSPTXG00000000440) LRRN1 (ENSPTXG00000000450) ENSPTXG00000000457 SUMF1 (ENSPTXG00000000467) ITPR1 (ENSPTXG00000000808) ENSPTXG00000002883 BHLHE40 (ENSPTXG00000002885) ARL8B (ENSPTXG00000002887) EDEM1 (ENSPTXG00000002889) GRM7 (ENSPTXG00000002895) ##22 LMCD1 (ENSPTXG00000002903) SSUH2 (ENSPTXG00000002904) ENSPTXG00000002905 OXTR (ENSPTXG00000002906) RAD18 (ENSPTXG00000002908) SRGAP3 (ENSPTXG00000002911) THUMPD3 (ENSPTXG00000002916) ENSPTXG00000002920 IRAK2 (ENSPTXG00000002922) ENSPTXG00000002923 SEC13 (ENSPTXG00000002924) CAND2 (ENSPTXG00000002928) ENSPTXG00000002933 ENSPTXG00000002935 MBD4 (ENSPTXG00000002936) Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000006605 CHL1 (ENSNSUG00000006603) CNTN6 (ENSNSUG00000006539) CNTN4 (ENSNSUG00000006531) TRNT1 (ENSNSUG00000006530) CRBN (ENSNSUG00000006528) LRRN1 (ENSNSUG00000006527) ENSNSUG00000006524 SUMF1 (ENSNSUG00000006522) ENSNSUG00000006519 ITPR1 (ENSNSUG00000006516) BHLHE40 (ENSNSUG00000006512) ARL8B (ENSNSUG00000006508) EDEM1 (ENSNSUG00000006360) ENSNSUG00000006357 ##22 GRM7 (ENSNSUG00000006356) ##22 LMCD1 (ENSNSUG00000006355) SSUH2 (ENSNSUG00000006353) ENSNSUG00000006350 OXTR (ENSNSUG00000006347) ENSNSUG00000006346 SRGAP3 (ENSNSUG00000006301) THUMPD3 (ENSNSUG00000006295) ENSNSUG00000006287 IRAK2 (ENSNSUG00000006285) ENSNSUG00000006283 SEC13 (ENSNSUG00000006282) CAND2 (ENSNSUG00000006281) ENSNSUG00000006279 ENSNSUG00000006278 IFT122 (ENSNSUG00000006277) Mainland tiger snake MODERN SPECIES 2 CNTN3 (ENSNSUG00000006618) ENSNSUG00000006605 CHL1 (ENSNSUG00000006603) CNTN6 (ENSNSUG00000006539) CNTN4 (ENSNSUG00000006531) TRNT1 (ENSNSUG00000006530) CRBN (ENSNSUG00000006528) LRRN1 (ENSNSUG00000006527) ENSNSUG00000006524 SUMF1 (ENSNSUG00000006522) ENSNSUG00000006519 ITPR1 (ENSNSUG00000006516) BHLHE40 (ENSNSUG00000006512) ARL8B (ENSNSUG00000006508) EDEM1 (ENSNSUG00000006360) ENSNSUG00000006357 ##22 GRM7 (ENSNSUG00000006356) ##22 LMCD1 (ENSNSUG00000006355) SSUH2 (ENSNSUG00000006353) ENSNSUG00000006350 OXTR (ENSNSUG00000006347) ENSNSUG00000006346 SRGAP3 (ENSNSUG00000006301) THUMPD3 (ENSNSUG00000006295) ENSNSUG00000006287 IRAK2 (ENSNSUG00000006285) ENSNSUG00000006283 SEC13 (ENSNSUG00000006282) CAND2 (ENSNSUG00000006281) ENSNSUG00000006279 ENSNSUG00000006278 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 1 ENSNNAG00000001814 CNTN3 (ENSNNAG00000001838) CHL1 (ENSNNAG00000001897) CNTN6 (ENSNNAG00000002047) CNTN4 (ENSNNAG00000002367) TRNT1 (ENSNNAG00000002400) ENSNNAG00000002424 LRRN1 (ENSNNAG00000002516) ENSNNAG00000002521 SUMF1 (ENSNNAG00000002532) ENSNNAG00000004054 BHLHE40 (ENSNNAG00000018438) ARL8B (ENSNNAG00000018443) EDEM1 (ENSNNAG00000018450) ENSNNAG00000018468 ##22 GRM7 (ENSNNAG00000018473) ##22 LMCD1 (ENSNNAG00000018484) SSUH2 (ENSNNAG00000018487) ENSNNAG00000018494 OXTR (ENSNNAG00000018500) ENSNNAG00000018503 SRGAP3 (ENSNNAG00000018519) THUMPD3 (ENSNNAG00000018537) ENSNNAG00000018544 ENSNNAG00000018550 TATDN2 (ENSNNAG00000018553) SEC13 (ENSNNAG00000018559) CAND2 (ENSNNAG00000018590) ENSNNAG00000018642 ENSNNAG00000018649 IFT122 (ENSNNAG00000018719) Indian cobra MODERN SPECIES 1 PDZRN3 (ENSNNAG00000001782) ENSNNAG00000001814 CNTN3 (ENSNNAG00000001838) CHL1 (ENSNNAG00000001897) CNTN6 (ENSNNAG00000002047) CNTN4 (ENSNNAG00000002367) TRNT1 (ENSNNAG00000002400) ENSNNAG00000002424 LRRN1 (ENSNNAG00000002516) ENSNNAG00000002521 SUMF1 (ENSNNAG00000002532) ENSNNAG00000004054 BHLHE40 (ENSNNAG00000018438) ARL8B (ENSNNAG00000018443) EDEM1 (ENSNNAG00000018450) ENSNNAG00000018468 ##22 GRM7 (ENSNNAG00000018473) ##22 LMCD1 (ENSNNAG00000018484) SSUH2 (ENSNNAG00000018487) ENSNNAG00000018494 OXTR (ENSNNAG00000018500) ENSNNAG00000018503 SRGAP3 (ENSNNAG00000018519) THUMPD3 (ENSNNAG00000018537) ENSNNAG00000018544 ENSNNAG00000018550 TATDN2 (ENSNNAG00000018553) SEC13 (ENSNNAG00000018559) CAND2 (ENSNNAG00000018590) ENSNNAG00000018642 ENSNNAG00000018649 Lizard DUPLICATION Lizard MODERN SPECIES 1 ENSACAG00000036932 TRNT1 (ENSACAG00000005657) CRBN (ENSACAG00000005582) ENSACAG00000045387 LRRN1 (ENSACAG00000026715) ENSACAG00000045524 SUMF1 (ENSACAG00000010294) ENSACAG00000035619 ITPR1 (ENSACAG00000009987) ENSACAG00000037777 BHLHE40 (ENSACAG00000012577) ARL8B (ENSACAG00000045374) EDEM1 (ENSACAG00000012377) ENSACAG00000029600 ENSACAG00000040711 ENSACAG00000043925 ##22 ENSACAG00000045588 ENSACAG00000034877 ENSACAG00000009849 ##22 trh (ENSACAG00000043370) ENSACAG00000012305 ENSACAG00000012285 NR2C2 (ENSACAG00000012082) FGD5 (ENSACAG00000011946) ENSACAG00000036348 C3orf20 (ENSACAG00000011942) CCDC174 (ENSACAG00000011855) ENSACAG00000043154 GRIP2 (ENSACAG00000013280) SLC6A6 (ENSACAG00000013426) ENSACAG00000037760 Lizard MODERN SPECIES 1 ENSACAG00000045387 LRRN1 (ENSACAG00000026715) ENSACAG00000045524 SUMF1 (ENSACAG00000010294) ENSACAG00000035619 ITPR1 (ENSACAG00000009987) ENSACAG00000037777 BHLHE40 (ENSACAG00000012577) ARL8B (ENSACAG00000045374) EDEM1 (ENSACAG00000012377) ENSACAG00000029600 ENSACAG00000040711 ENSACAG00000043925 ##22 ENSACAG00000045588 ENSACAG00000034877 ENSACAG00000009849 ##22 trh (ENSACAG00000043370) ENSACAG00000012305 ENSACAG00000012285 NR2C2 (ENSACAG00000012082) FGD5 (ENSACAG00000011946) ENSACAG00000036348 C3orf20 (ENSACAG00000011942) CCDC174 (ENSACAG00000011855) ENSACAG00000043154 GRIP2 (ENSACAG00000013280) SLC6A6 (ENSACAG00000013426) ENSACAG00000037760 ENSACAG00000038707 ENSACAG00000040167 LSM3 (ENSACAG00000013503) Archelosauria ANCESTRAL SPECIES 17 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b Cryptodira ANCESTRAL SPECIES 17 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000003964.b ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT01030000238841 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000003964.b ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B Emydidae ANCESTRAL SPECIES 13 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT01030000238841 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000003964.b ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B Three-toed box turtle MODERN SPECIES 33 CHL1 (ENSTMTG00000018260) ENSTMTG00000018456 CNTN6 (ENSTMTG00000018470) CNTN4 (ENSTMTG00000018539) IL5RA (ENSTMTG00000018639) TRNT1 (ENSTMTG00000018738) CRBN (ENSTMTG00000018758) LRRN1 (ENSTMTG00000018782) SUMF1 (ENSTMTG00000018795) ENSTMTG00000018826 ITPR1 (ENSTMTG00000018838) ENSTMTG00000018932 BHLHE40 (ENSTMTG00000018947) ARL8B (ENSTMTG00000018960) EDEM1 (ENSTMTG00000018977) GRM7 (ENSTMTG00000019012) ##22 LMCD1 (ENSTMTG00000019124) SSUH2 (ENSTMTG00000019142) ENSTMTG00000019174 ENSTMTG00000019192 CAV3 (ENSTMTG00000019214) OXTR (ENSTMTG00000019224) RAD18 (ENSTMTG00000019261) SRGAP3 (ENSTMTG00000019297) THUMPD3 (ENSTMTG00000019533) ENSTMTG00000019550 IRAK2 (ENSTMTG00000019566) TATDN2 (ENSTMTG00000019600) GHRL (ENSTMTG00000019620) SEC13 (ENSTMTG00000019636) CAND2 (ENSTMTG00000019657) painted turtle MODERN SPECIES 699 CNTN6 (ENSCPBG00000017663) CNTN4 (ENSCPBG00000017643) IL5RA (ENSCPBG00000017639) TRNT1 (ENSCPBG00000017636) CRBN (ENSCPBG00000017633) LRRN1 (ENSCPBG00000017631) ENSCPBG00000017630 SUMF1 (ENSCPBG00000017623) ITPR1 (ENSCPBG00000015066) BHLHE40 (ENSCPBG00000014940) ARL8B (ENSCPBG00000014937) EDEM1 (ENSCPBG00000014836) GRM7 (ENSCPBG00000014825) ##22 ENSCPBG00000014823 LMCD1 (ENSCPBG00000014818) SSUH2 (ENSCPBG00000014808) ENSCPBG00000014803 ENSCPBG00000014800 CAV3 (ENSCPBG00000014797) OXTR (ENSCPBG00000014795) RAD18 (ENSCPBG00000014787) SRGAP3 (ENSCPBG00000014775) THUMPD3 (ENSCPBG00000014771) ENSCPBG00000014768 ENSCPBG00000014760 IRAK2 (ENSCPBG00000014750) TATDN2 (ENSCPBG00000014748) ENSCPBG00000014745 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT01030000238841 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b Abingdon island giant tortoise MODERN SPECIES 1018 CNTN4 (ENSCABG00000017322) IL5RA (ENSCABG00000017331) TRNT1 (ENSCABG00000017350) CRBN (ENSCABG00000017369) LRRN1 (ENSCABG00000017472) ENSCABG00000017474 SUMF1 (ENSCABG00000017480) ITPR1 (ENSCABG00000017505) ENSCABG00000017520 BHLHE40 (ENSCABG00000017522) ARL8B (ENSCABG00000017525) EDEM1 (ENSCABG00000017541) GRM7 (ENSCABG00000017790) ##22 LMCD1 (ENSCABG00000017807) SSUH2 (ENSCABG00000017809) CAV3 (ENSCABG00000017812) OXTR (ENSCABG00000017814) RAD18 (ENSCABG00000017818) SRGAP3 (ENSCABG00000000091) THUMPD3 (ENSCABG00000000193) ENSCABG00000000206 IRAK2 (ENSCABG00000000217) TATDN2 (ENSCABG00000000234) GHRL (ENSCABG00000000251) SEC13 (ENSCABG00000000279) CAND2 (ENSCABG00000000379) ENSCABG00000001473 ENSCABG00000001478 Goode s thornscrub tortoise MODERN SPECIES 21 CNTN6 (ENSGEVG00005017681) ENSGEVG00005017608 CNTN4 (ENSGEVG00005017523) IL5RA (ENSGEVG00005017497) ENSGEVG00005017472 TRNT1 (ENSGEVG00005017461) CRBN (ENSGEVG00005017441) LRRN1 (ENSGEVG00005017431) ENSGEVG00005017420 SUMF1 (ENSGEVG00005017395) ENSGEVG00005017380 ENSGEVG00005011014 BHLHE40 (ENSGEVG00005010114) ARL8B (ENSGEVG00005010089) EDEM1 (ENSGEVG00005009852) GRM7 (ENSGEVG00005009564) ##22 LMCD1 (ENSGEVG00005009447) SSUH2 (ENSGEVG00005009363) ENSGEVG00005009300 ENSGEVG00005009228 CAV3 (ENSGEVG00005009176) OXTR (ENSGEVG00005009121) RAD18 (ENSGEVG00005009041) SRGAP3 (ENSGEVG00005007925) THUMPD3 (ENSGEVG00005007694) ENSGEVG00005007674 IRAK2 (ENSGEVG00005007624) TATDN2 (ENSGEVG00005007577) GHRL (ENSGEVG00005007550) SEC13 (ENSGEVG00005007518) CAND2 (ENSGEVG00005007489) Chinese turtle MODERN SPECIES 1835 ENSPSIG00000017232 IL5RA (ENSPSIG00000017240) TRNT1 (ENSPSIG00000017356) CRBN (ENSPSIG00000017465) ENSPSIG00000000072 LRRN1 (ENSPSIG00000000527) ENSPSIG00000017734 SUMF1 (ENSPSIG00000017744) ITPR1 (ENSPSIG00000017904) BHLHE40 (ENSPSIG00000018157) ARL8B (ENSPSIG00000005943) EDEM1 (ENSPSIG00000005957) ENSPSIG00000000535 GRM7 (ENSPSIG00000006085) ##22 LMCD1 (ENSPSIG00000006716) SSUH2 (ENSPSIG00000006779) ENSPSIG00000006832 ENSPSIG00000006837 ENSPSIG00000006843 CAV3 (ENSPSIG00000006848) OXTR (ENSPSIG00000006867) RAD18 (ENSPSIG00000006928) SRGAP3 (ENSPSIG00000007033) THUMPD3 (ENSPSIG00000007370) ENSPSIG00000007377 ENSPSIG00000007384 IRAK2 (ENSPSIG00000007409) TATDN2 (ENSPSIG00000007521) GHRL (ENSPSIG00000020346) Archosauria ANCESTRAL SPECIES 24 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT01030000237821 ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b Australian saltwater crocodile MODERN SPECIES 37 ENSCPRG00005015470 ENSCPRG00005015468 CNTN4 (ENSCPRG00005015455) IL5RA (ENSCPRG00005015437) TRNT1 (ENSCPRG00005015429) CRBN (ENSCPRG00005015422) LRRN1 (ENSCPRG00005015420) ENSCPRG00005015416 SUMF1 (ENSCPRG00005015401) ENSCPRG00005015393 ITPR1 (ENSCPRG00005013420) BHLHE40 (ENSCPRG00005013082) ARL8B (ENSCPRG00005013015) EDEM1 (ENSCPRG00005012826) ENSCPRG00005012786 ##22 GRM7 (ENSCPRG00005012779) ##22 ENSCPRG00005012767 LMCD1 (ENSCPRG00005012738) ENSCPRG00005012724 ENSCPRG00005012717 CAV3 (ENSCPRG00005012711) OXTR (ENSCPRG00005012696) RAD18 (ENSCPRG00005012686) SRGAP3 (ENSCPRG00005012679) THUMPD3 (ENSCPRG00005012665) ENSCPRG00005012662 IRAK2 (ENSCPRG00005012647) TATDN2 (ENSCPRG00005012643) GHRL (ENSCPRG00005012641) RPL32 (ENSCPRG00005012635) CAND2 (ENSCPRG00005012618) Aves ANCESTRAL SPECIES 29 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 ENSGT00530000063687.a African ostrich MODERN SPECIES 833 GRM7 (ENSSCUG00000012842) ##22 LMCD1 (ENSSCUG00000012846) SSUH2 (ENSSCUG00000012848) CAV3 (ENSSCUG00000012850) OXTR (ENSSCUG00000012851) RAD18 (ENSSCUG00000012857) SRGAP3 (ENSSCUG00000012949) THUMPD3 (ENSSCUG00000013073) ENSSCUG00000013075 IRAK2 (ENSSCUG00000013076) GHRL (ENSSCUG00000013078) SEC13 (ENSSCUG00000013080) CAND2 (ENSSCUG00000013081) ENSSCUG00000013083 ENSSCUG00000013085 MBD4 (ENSSCUG00000013086) Neognathae ANCESTRAL SPECIES 27 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 ENSGT00530000063687.a Neognathae_b ANCESTRAL SPECIES 18 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b Neognathae_c ANCESTRAL SPECIES 21 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00390000014874.d ENSGT00530000063687.a ENSGT00390000001016.b Kakapo MODERN SPECIES 3 ENSSHBG00005010579 CNTN3 (ENSSHBG00005000965) CHL1 (ENSSHBG00005021241) CNTN6 (ENSSHBG00005021239) CNTN4 (ENSSHBG00005021238) IL5RA (ENSSHBG00005021237) TRNT1 (ENSSHBG00005021236) CRBN (ENSSHBG00005021235) LRRN1 (ENSSHBG00005021234) ENSSHBG00005021232 SUMF1 (ENSSHBG00005021231) ITPR1 (ENSSHBG00005021182) BHLHE40 (ENSSHBG00005021165) ARL8B (ENSSHBG00005021164) EDEM1 (ENSSHBG00005021161) GRM7 (ENSSHBG00005021159) ##22 LMCD1 (ENSSHBG00005021158) SSUH2 (ENSSHBG00005021156) CAV3 (ENSSHBG00005021155) OXTR (ENSSHBG00005021154) RAD18 (ENSSHBG00005021151) SRGAP3 (ENSSHBG00005021150) THUMPD3 (ENSSHBG00005021147) ENSSHBG00005021145 IRAK2 (ENSSHBG00005021143) ENSSHBG00005021139 ABHD6 (ENSSHBG00005021137) DNASE1L3 (ENSSHBG00005021136) FLNB (ENSSHBG00005021128) SLMAP (ENSSHBG00005021121) DENND6A (ENSSHBG00005021116) Golden eagle MODERN SPECIES 12 CHL1 (ENSACCG00020009287) CNTN6 (ENSACCG00020009592) CNTN4 (ENSACCG00020009634) ENSACCG00020009645 IL5RA (ENSACCG00020009685) TRNT1 (ENSACCG00020009728) CRBN (ENSACCG00020009742) ENSACCG00020009755 LRRN1 (ENSACCG00020009768) ENSACCG00020009779 SUMF1 (ENSACCG00020009793) ITPR1 (ENSACCG00020009868) BHLHE40 (ENSACCG00020009955) ARL8B (ENSACCG00020009966) EDEM1 (ENSACCG00020009983) GRM7 (ENSACCG00020010003) ##22 LMCD1 (ENSACCG00020010014) SSUH2 (ENSACCG00020010024) CAV3 (ENSACCG00020010035) OXTR (ENSACCG00020010045) RAD18 (ENSACCG00020010080) SRGAP3 (ENSACCG00020010374) THUMPD3 (ENSACCG00020010551) ENSACCG00020010562 IRAK2 (ENSACCG00020010579) SEC13 (ENSACCG00020010591) CAND2 (ENSACCG00020010611) ENSACCG00020010634 ENSACCG00020010648 MBD4 (ENSACCG00020010658) IFT122 (ENSACCG00020010690) Passeriformes ANCESTRAL SPECIES 16 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 Great tit MODERN SPECIES 3 PDZRN3 (ENSPMJG00000005657) ENSPMJG00000005665 CNTN3 (ENSPMJG00000005671) CHL1 (ENSPMJG00000005688) CNTN6 (ENSPMJG00000005736) CNTN4 (ENSPMJG00000005757) IL5RA (ENSPMJG00000005764) TRNT1 (ENSPMJG00000005765) CRBN (ENSPMJG00000005773) ENSPMJG00000005792 SUMF1 (ENSPMJG00000005794) ITPR1 (ENSPMJG00000005801) BHLHE40 (ENSPMJG00000005858) ARL8B (ENSPMJG00000005862) EDEM1 (ENSPMJG00000005863) GRM7 (ENSPMJG00000005895) ##22 LMCD1 (ENSPMJG00000005956) CAV3 (ENSPMJG00000005958) OXTR (ENSPMJG00000005959) RAD18 (ENSPMJG00000005960) ENSPMJG00000005966 SRGAP3 (ENSPMJG00000005970) THUMPD3 (ENSPMJG00000005977) ENSPMJG00000005978 IRAK2 (ENSPMJG00000005988) SEC13 (ENSPMJG00000006004) CAND2 (ENSPMJG00000006009) ENSPMJG00000006014 MBD4 (ENSPMJG00000006016) IFT122 (ENSPMJG00000006019) RHO (ENSPMJG00000006031) Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 Flycatcher MODERN SPECIES 3 CNTN6 (ENSFALG00000013472) CNTN4 (ENSFALG00000013504) ENSFALG00000025220 IL5RA (ENSFALG00000013534) TRNT1 (ENSFALG00000013539) CRBN (ENSFALG00000013540) LRRN1 (ENSFALG00000014525) ENSFALG00000023036 SUMF1 (ENSFALG00000013555) ITPR1 (ENSFALG00000013566) ENSFALG00000023539 ENSFALG00000027473 ARL8B (ENSFALG00000013578) EDEM1 (ENSFALG00000013588) ENSFALG00000024020 GRM7 (ENSFALG00000013602) ##22 ENSFALG00000025075 LMCD1 (ENSFALG00000013612) CAV3 (ENSFALG00000024966) OXTR (ENSFALG00000013622) RAD18 (ENSFALG00000013625) SRGAP3 (ENSFALG00000013628) ENSFALG00000023660 ENSFALG00000026425 THUMPD3 (ENSFALG00000013631) ENSFALG00000013639 ENSFALG00000013647 ENSFALG00000013653 ENSFALG00000013662 MBD4 (ENSFALG00000013663) IFT122 (ENSFALG00000013670) Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C.l ENSGT00940000155198.C.k ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 Medium ground finch MODERN SPECIES 123 CNTN6 (ENSGFOG00000006749) CNTN4 (ENSGFOG00000007641) IL5RA (ENSGFOG00000007674) TRNT1 (ENSGFOG00000007738) CRBN (ENSGFOG00000007741) LRRN1 (ENSGFOG00000007754) ENSGFOG00000007761 SUMF1 (ENSGFOG00000007775) ITPR1 (ENSGFOG00000007908) BHLHE40 (ENSGFOG00000008912) ARL8B (ENSGFOG00000008921) EDEM1 (ENSGFOG00000008936) GRM7 (ENSGFOG00000008966) ##22 LMCD1 (ENSGFOG00000008974) ENSGFOG00000008981 CAV3 (ENSGFOG00000008983) OXTR (ENSGFOG00000008986) RAD18 (ENSGFOG00000008990) SRGAP3 (ENSGFOG00000009033) THUMPD3 (ENSGFOG00000009508) ENSGFOG00000009517 IRAK2 (ENSGFOG00000009530) SEC13 (ENSGFOG00000009539) CAND2 (ENSGFOG00000009552) ENSGFOG00000009571 ENSGFOG00000009581 IFT122 (ENSGFOG00000009686) RHO (ENSGFOG00000012583) Passeroidea ANCESTRAL SPECIES 16 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C.l ENSGT00940000155198.C.k ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 Zebra finch MODERN SPECIES 3 PDZRN3 (ENSTGUG00000014523) CNTN3 (ENSTGUG00000009960) CHL1 (ENSTGUG00000009997) CNTN6 (ENSTGUG00000010053) CNTN4 (ENSTGUG00000010102) IL5RA (ENSTGUG00000010171) TRNT1 (ENSTGUG00000010192) CRBN (ENSTGUG00000010200) LRRN1 (ENSTGUG00000010215) ENSTGUG00000019447 SUMF1 (ENSTGUG00000010221) ITPR1 (ENSTGUG00000010241) BHLHE40 (ENSTGUG00000010301) ARL8B (ENSTGUG00000022959) EDEM1 (ENSTGUG00000010316) GRM7 (ENSTGUG00000010358) ##22 LMCD1 (ENSTGUG00000010388) CAV3 (ENSTGUG00000010401) OXTR (ENSTGUG00000020441) RAD18 (ENSTGUG00000010405) SRGAP3 (ENSTGUG00000010415) THUMPD3 (ENSTGUG00000010440) ENSTGUG00000024732 IRAK2 (ENSTGUG00000010449) SEC13 (ENSTGUG00000010453) CAND2 (ENSTGUG00000010461) MBD4 (ENSTGUG00000010478) RPL32 (ENSTGUG00000010472) IFT122 (ENSTGUG00000010483) RHO (ENSTGUG00000024955) ENSTGUG00000025075 Common canary DUPLICATION Common canary MODERN SPECIES 86 ENSSCAG00000015338 ##22 LMCD1 (ENSSCAG00000015348) CAV3 (ENSSCAG00000015351) OXTR (ENSSCAG00000015355) RAD18 (ENSSCAG00000015359) SRGAP3 (ENSSCAG00000015492) THUMPD3 (ENSSCAG00000015878) ENSSCAG00000015885 IRAK2 (ENSSCAG00000015888) SEC13 (ENSSCAG00000015892) CAND2 (ENSSCAG00000015898) ENSSCAG00000015908 MBD4 (ENSSCAG00000015913) IFT122 (ENSSCAG00000016026) RHO (ENSSCAG00000016206) ENSSCAG00000016208 Common canary MODERN SPECIES 817 ENSSCAG00000002358 ##22 Galloanserae ANCESTRAL SPECIES 26 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b Anatidae ANCESTRAL SPECIES 41 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b Pink-footed goose MODERN SPECIES 49 PDZRN3 (ENSABRG00000016746) CNTN3 (ENSABRG00000016737) CHL1 (ENSABRG00000016703) CNTN6 (ENSABRG00000015653) CNTN4 (ENSABRG00000014569) IL5RA (ENSABRG00000014471) TRNT1 (ENSABRG00000014416) CRBN (ENSABRG00000014371) LRRN1 (ENSABRG00000014369) ENSABRG00000014367 SUMF1 (ENSABRG00000014365) ITPR1 (ENSABRG00000010195) BHLHE40 (ENSABRG00000009713) ARL8B (ENSABRG00000009711) EDEM1 (ENSABRG00000009573) GRM7 (ENSABRG00000009502) ##22 LMCD1 (ENSABRG00000009469) SSUH2 (ENSABRG00000009453) CAV3 (ENSABRG00000009447) OXTR (ENSABRG00000009437) RAD18 (ENSABRG00000009421) SRGAP3 (ENSABRG00000009392) THUMPD3 (ENSABRG00000009373) ENSABRG00000009365 IRAK2 (ENSABRG00000009344) GHRL (ENSABRG00000009307) SEC13 (ENSABRG00000009259) CAND2 (ENSABRG00000008196) ENSABRG00000008104 ENSABRG00000008088 IFT122 (ENSABRG00000005701) Duck MODERN SPECIES 4 PDZRN3 (ENSAPLG00000014073) CNTN3 (ENSAPLG00000009693) CHL1 (ENSAPLG00000007000) CNTN6 (ENSAPLG00000005639) CNTN4 (ENSAPLG00000004320) IL5RA (ENSAPLG00000004282) TRNT1 (ENSAPLG00000004258) CRBN (ENSAPLG00000003897) LRRN1 (ENSAPLG00000001694) ENSAPLG00000001691 SUMF1 (ENSAPLG00000003538) ITPR1 (ENSAPLG00000016350) BHLHE40 (ENSAPLG00000016313) ARL8B (ENSAPLG00000016295) EDEM1 (ENSAPLG00000027743) GRM7 (ENSAPLG00000002555) ##22 LMCD1 (ENSAPLG00000002970) SSUH2 (ENSAPLG00000003015) CAV3 (ENSAPLG00000003098) OXTR (ENSAPLG00000003100) RAD18 (ENSAPLG00000003138) SRGAP3 (ENSAPLG00000003289) THUMPD3 (ENSAPLG00000003598) ENSAPLG00000003676 IRAK2 (ENSAPLG00000003679) GHRL (ENSAPLG00000003792) SEC13 (ENSAPLG00000003815) CAND2 (ENSAPLG00000003936) ENSAPLG00000004194 IFT122 (ENSAPLG00000004234) RHO (ENSAPLG00000005189) Phasianidae ANCESTRAL SPECIES 16 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a.e ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00530000063647.A.a.d ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a.e ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b Turkey MODERN SPECIES 5 ENSMGAG00000021720 ENSMGAG00000009709 CHL1 (ENSMGAG00000009762) CNTN6 (ENSMGAG00000009812) CNTN4 (ENSMGAG00000009910) IL5RA (ENSMGAG00000009996) CRBN (ENSMGAG00000010013) TRNT1 (ENSMGAG00000009971) LRRN1 (ENSMGAG00000009988) ENSMGAG00000018225 SUMF1 (ENSMGAG00000010033) ITPR1 (ENSMGAG00000010046) BHLHE40 (ENSMGAG00000018338) ARL8B (ENSMGAG00000017811) EDEM1 (ENSMGAG00000010070) GRM7 (ENSMGAG00000010102) ##22 ENSMGAG00000018916 ENSMGAG00000019285 ENSMGAG00000010131 OXTR (ENSMGAG00000010127) ENSMGAG00000010109 ENSMGAG00000010119 ENSMGAG00000010182 IRAK2 (ENSMGAG00000010194) ENSMGAG00000010214 SEC13 (ENSMGAG00000010222) ENSMGAG00000010238 ENSMGAG00000010254 MBD4 (ENSMGAG00000010259) IFT122 (ENSMGAG00000010263) RHO (ENSMGAG00000010301) Chicken MODERN SPECIES 3 ENSGALG00010020359 CNTN3 (ENSGALG00010020369) CHL1 (ENSGALG00010020396) CNTN6 (ENSGALG00010020425) CNTN4 (ENSGALG00010020436) IL5RA (ENSGALG00010020457) TRNT1 (ENSGALG00010020484) CRBN (ENSGALG00010020509) LRRN1 (ENSGALG00010020562) ENSGALG00010020580 SUMF1 (ENSGALG00010020596) ITPR1 (ENSGALG00010021688) BHLHE40 (ENSGALG00010021719) ARL8B (ENSGALG00010021730) EDEM1 (ENSGALG00010021736) GRM7 (ENSGALG00010019426) ##22 LMCD1 (ENSGALG00010019441) CAV3 (ENSGALG00010019451) OXTR (ENSGALG00010019473) RAD18 (ENSGALG00010019584) SRGAP3 (ENSGALG00010019624) THUMPD3 (ENSGALG00010018999) ENSGALG00010019006 IRAK2 (ENSGALG00010019017) GHRL (ENSGALG00010019047) SEC13 (ENSGALG00010022642) CAND2 (ENSGALG00010019065) RPL32 (ENSGALG00010019093) MBD4 (ENSGALG00010019110) IFT122 (ENSGALG00010019144) RHO (ENSGALG00010019173) Japanese quail DUPLICATION Japanese quail MODERN SPECIES 3 ENSCJPG00005018674 ENSCJPG00005018675 CNTN6 (ENSCJPG00005018676) CNTN4 (ENSCJPG00005018679) IL5RA (ENSCJPG00005018680) TRNT1 (ENSCJPG00005018681) CRBN (ENSCJPG00005018682) LRRN1 (ENSCJPG00005018683) ENSCJPG00005018684 SUMF1 (ENSCJPG00005018685) ITPR1 (ENSCJPG00005018726) ENSCJPG00005020532 BHLHE40 (ENSCJPG00005020534) ARL8B (ENSCJPG00005020535) EDEM1 (ENSCJPG00005020536) ENSCJPG00005020539 ##22 ENSCJPG00005020540 ##22 LMCD1 (ENSCJPG00005020541) CAV3 (ENSCJPG00005020542) OXTR (ENSCJPG00005020543) RAD18 (ENSCJPG00005020544) SRGAP3 (ENSCJPG00005020553) THUMPD3 (ENSCJPG00005020742) ENSCJPG00005020743 IRAK2 (ENSCJPG00005020747) GHRL (ENSCJPG00005020750) SEC13 (ENSCJPG00005020751) CAND2 (ENSCJPG00005020756) ENSCJPG00005020793 MBD4 (ENSCJPG00005020795) IFT122 (ENSCJPG00005020797) Japanese quail MODERN SPECIES 3 ENSCJPG00005018675 CNTN6 (ENSCJPG00005018676) CNTN4 (ENSCJPG00005018679) IL5RA (ENSCJPG00005018680) TRNT1 (ENSCJPG00005018681) CRBN (ENSCJPG00005018682) LRRN1 (ENSCJPG00005018683) ENSCJPG00005018684 SUMF1 (ENSCJPG00005018685) ITPR1 (ENSCJPG00005018726) ENSCJPG00005020532 BHLHE40 (ENSCJPG00005020534) ARL8B (ENSCJPG00005020535) EDEM1 (ENSCJPG00005020536) ENSCJPG00005020539 ##22 ENSCJPG00005020540 ##22 LMCD1 (ENSCJPG00005020541) CAV3 (ENSCJPG00005020542) OXTR (ENSCJPG00005020543) RAD18 (ENSCJPG00005020544) SRGAP3 (ENSCJPG00005020553) THUMPD3 (ENSCJPG00005020742) ENSCJPG00005020743 IRAK2 (ENSCJPG00005020747) GHRL (ENSCJPG00005020750) SEC13 (ENSCJPG00005020751) CAND2 (ENSCJPG00005020756) ENSCJPG00005020793 MBD4 (ENSCJPG00005020795) IFT122 (ENSCJPG00005020797) RHO (ENSCJPG00005020821) Mammalia ANCESTRAL SPECIES 18 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Theria ANCESTRAL SPECIES 28 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Marsupialia ANCESTRAL SPECIES 14 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Opossum DUPLICATION Opossum MODERN SPECIES 5 ENSMODG00000048583 ENSMODG00000028686 CNTN4 (ENSMODG00000004323) ENSMODG00000004351 TRNT1 (ENSMODG00000004368) CRBN (ENSMODG00000004403) LRRN1 (ENSMODG00000024416) ENSMODG00000004437 SUMF1 (ENSMODG00000045035) ITPR1 (ENSMODG00000004495) BHLHE40 (ENSMODG00000004516) ARL8B (ENSMODG00000004530) EDEM1 (ENSMODG00000004556) ENSMODG00000042609 ENSMODG00000004592 ##22 GRM7 (ENSMODG00000004605) ##22 LMCD1 (ENSMODG00000004651) SSUH2 (ENSMODG00000004659) ENSMODG00000045708 OXTR (ENSMODG00000004673) RAD18 (ENSMODG00000004679) SRGAP3 (ENSMODG00000004712) THUMPD3 (ENSMODG00000004715) SETD5 (ENSMODG00000004781) ENSMODG00000039324 MTMR14 (ENSMODG00000004830) CPNE9 (ENSMODG00000005036) BRPF1 (ENSMODG00000005085) OGG1 (ENSMODG00000005099) CAMK1 (ENSMODG00000005114) TADA3 (ENSMODG00000005129) Opossum MODERN SPECIES 5 ENSMODG00000051590 ENSMODG00000048583 ENSMODG00000028686 CNTN4 (ENSMODG00000004323) ENSMODG00000004351 TRNT1 (ENSMODG00000004368) CRBN (ENSMODG00000004403) LRRN1 (ENSMODG00000024416) ENSMODG00000004437 SUMF1 (ENSMODG00000045035) ITPR1 (ENSMODG00000004495) BHLHE40 (ENSMODG00000004516) ARL8B (ENSMODG00000004530) EDEM1 (ENSMODG00000004556) ENSMODG00000042609 ENSMODG00000004592 ##22 GRM7 (ENSMODG00000004605) ##22 LMCD1 (ENSMODG00000004651) SSUH2 (ENSMODG00000004659) ENSMODG00000045708 OXTR (ENSMODG00000004673) RAD18 (ENSMODG00000004679) SRGAP3 (ENSMODG00000004712) THUMPD3 (ENSMODG00000004715) SETD5 (ENSMODG00000004781) ENSMODG00000039324 MTMR14 (ENSMODG00000004830) CPNE9 (ENSMODG00000005036) BRPF1 (ENSMODG00000005085) OGG1 (ENSMODG00000005099) CAMK1 (ENSMODG00000005114) Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Tasmanian devil MODERN SPECIES ENSSHAG00000010121 ENSSHAG00000010125 CNTN6 (ENSSHAG00000015764) CNTN4 (ENSSHAG00000018520) IL5RA (ENSSHAG00000018837) TRNT1 (ENSSHAG00000018861) CRBN (ENSSHAG00000029768) LRRN1 (ENSSHAG00000027597) ENSSHAG00000030072 SUMF1 (ENSSHAG00000022459) ENSSHAG00000012663 BHLHE40 (ENSSHAG00000023494) ARL8B (ENSSHAG00000031008) EDEM1 (ENSSHAG00000005432) ENSSHAG00000026569 GRM7 (ENSSHAG00000024593) ##22 LMCD1 (ENSSHAG00000008779) SSUH2 (ENSSHAG00000010057) CAV3 (ENSSHAG00000021107) OXTR (ENSSHAG00000011374) RAD18 (ENSSHAG00000012472) SRGAP3 (ENSSHAG00000012943) THUMPD3 (ENSSHAG00000014467) SETD5 (ENSSHAG00000014669) LHFPL4 (ENSSHAG00000030288) MTMR14 (ENSSHAG00000015131) CPNE9 (ENSSHAG00000015270) BRPF1 (ENSSHAG00000015320) OGG1 (ENSSHAG00000000167) CAMK1 (ENSSHAG00000015377) TADA3 (ENSSHAG00000015430) Diprotodontia ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Wallaby MODERN SPECIES 9595 ENSMEUG00000002479 ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1012 ENSVURG00010008843 ENSVURG00010008854 CNTN4 (ENSVURG00010008887) IL5RA (ENSVURG00010008982) TRNT1 (ENSVURG00010008997) CRBN (ENSVURG00010009020) LRRN1 (ENSVURG00010009042) ENSVURG00010009062 SUMF1 (ENSVURG00010009079) ITPR1 (ENSVURG00010009114) BHLHE40 (ENSVURG00010009249) ARL8B (ENSVURG00010009259) EDEM1 (ENSVURG00010009274) ENSVURG00010009302 ENSVURG00010009325 ##22 GRM7 (ENSVURG00010009382) ##22 ENSVURG00010009435 ENSVURG00010009440 LMCD1 (ENSVURG00010009459) SSUH2 (ENSVURG00010009470) CAV3 (ENSVURG00010009478) OXTR (ENSVURG00010009486) RAD18 (ENSVURG00010009498) SRGAP3 (ENSVURG00010009588) THUMPD3 (ENSVURG00010010790) SETD5 (ENSVURG00010010824) LHFPL4 (ENSVURG00010010906) MTMR14 (ENSVURG00010010921) CPNE9 (ENSVURG00010010933) BRPF1 (ENSVURG00010010944) OGG1 (ENSVURG00010010954) Common wonbat MODERN SPECIES 1012 CNTN6 (ENSVURG00010008756) ENSVURG00010008843 ENSVURG00010008854 CNTN4 (ENSVURG00010008887) IL5RA (ENSVURG00010008982) TRNT1 (ENSVURG00010008997) CRBN (ENSVURG00010009020) LRRN1 (ENSVURG00010009042) ENSVURG00010009062 SUMF1 (ENSVURG00010009079) ITPR1 (ENSVURG00010009114) BHLHE40 (ENSVURG00010009249) ARL8B (ENSVURG00010009259) EDEM1 (ENSVURG00010009274) ENSVURG00010009302 ENSVURG00010009325 ##22 GRM7 (ENSVURG00010009382) ##22 ENSVURG00010009435 ENSVURG00010009440 LMCD1 (ENSVURG00010009459) SSUH2 (ENSVURG00010009470) CAV3 (ENSVURG00010009478) OXTR (ENSVURG00010009486) RAD18 (ENSVURG00010009498) SRGAP3 (ENSVURG00010009588) THUMPD3 (ENSVURG00010010790) SETD5 (ENSVURG00010010824) LHFPL4 (ENSVURG00010010906) MTMR14 (ENSVURG00010010921) CPNE9 (ENSVURG00010010933) BRPF1 (ENSVURG00010010944) koala DUPLICATION koala MODERN SPECIES 247 ENSPCIG00000024208 ##22 GRM7 (ENSPCIG00000036328) ##22 ENSPCIG00000017161 LMCD1 (ENSPCIG00000017159) SSUH2 (ENSPCIG00000035482) CAV3 (ENSPCIG00000022742) OXTR (ENSPCIG00000006580) RAD18 (ENSPCIG00000024872) SRGAP3 (ENSPCIG00000034645) THUMPD3 (ENSPCIG00000002049) SETD5 (ENSPCIG00000001936) LHFPL4 (ENSPCIG00000001902) koala MODERN SPECIES 247 ENSPCIG00000024208 ##22 GRM7 (ENSPCIG00000036328) ##22 ENSPCIG00000017161 LMCD1 (ENSPCIG00000017159) SSUH2 (ENSPCIG00000035482) CAV3 (ENSPCIG00000022742) OXTR (ENSPCIG00000006580) RAD18 (ENSPCIG00000024872) SRGAP3 (ENSPCIG00000034645) THUMPD3 (ENSPCIG00000002049) SETD5 (ENSPCIG00000001936) LHFPL4 (ENSPCIG00000001902) Eutheria ANCESTRAL SPECIES 14 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Atlantogenata ANCESTRAL SPECIES 34 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Xenarthra ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Armadillo MODERN SPECIES 1373 ENSDNOG00000045152 GRM7 (ENSDNOG00000015428) ##22 ENSDNOG00000046600 LMCD1 (ENSDNOG00000000622) SSUH2 (ENSDNOG00000000625) CAV3 (ENSDNOG00000031489) OXTR (ENSDNOG00000033285) Sloth DUPLICATION Sloth MODERN SPECIES 7125 GRM7 (ENSCHOG00000011897) ##22 Sloth MODERN SPECIES 6386 ENSCHOG00000002775 ##22 ZNF454 (ENSCHOG00000002770) Afrotheria ANCESTRAL SPECIES 32 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Elephant MODERN SPECIES 49 ENSLAFG00000031602 CNTN3 (ENSLAFG00000008082) CHL1 (ENSLAFG00000000179) CNTN6 (ENSLAFG00000008927) CNTN4 (ENSLAFG00000011631) IL5RA (ENSLAFG00000011644) TRNT1 (ENSLAFG00000023191) CRBN (ENSLAFG00000017627) LRRN1 (ENSLAFG00000010287) ENSLAFG00000026765 SUMF1 (ENSLAFG00000010276) ITPR1 (ENSLAFG00000002957) BHLHE40 (ENSLAFG00000004896) ARL8B (ENSLAFG00000007764) EDEM1 (ENSLAFG00000007772) GRM7 (ENSLAFG00000002333) ##22 LMCD1 (ENSLAFG00000015653) SSUH2 (ENSLAFG00000010680) CAV3 (ENSLAFG00000030253) OXTR (ENSLAFG00000005307) RAD18 (ENSLAFG00000004667) SRGAP3 (ENSLAFG00000005453) THUMPD3 (ENSLAFG00000005103) SETD5 (ENSLAFG00000008849) LHFPL4 (ENSLAFG00000008855) MTMR14 (ENSLAFG00000010144) ENSLAFG00000029305 BRPF1 (ENSLAFG00000016431) OGG1 (ENSLAFG00000016438) CAMK1 (ENSLAFG00000016446) TADA3 (ENSLAFG00000017494) Hyrax MODERN SPECIES 6735 GRM7 (ENSPCAG00000003450) ##22 Tenrec MODERN SPECIES 7988 GRM7 (ENSETEG00000007170) ##22 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Equus ANCESTRAL SPECIES 5 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT01090000263390 ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Donkey MODERN SPECIES 13 ENSEASG00005002560 ENSEASG00005032406 CNTN6 (ENSEASG00005003549) CNTN4 (ENSEASG00005003558) IL5RA (ENSEASG00005003564) TRNT1 (ENSEASG00005003577) CRBN (ENSEASG00005003584) LRRN1 (ENSEASG00005003592) ENSEASG00005032131 SUMF1 (ENSEASG00005003601) ITPR1 (ENSEASG00005004852) BHLHE40 (ENSEASG00005034761) ARL8B (ENSEASG00005023967) EDEM1 (ENSEASG00005013107) ENSEASG00005031999 GRM7 (ENSEASG00005013291) ##22 ENSEASG00005013295 LMCD1 (ENSEASG00005013302) SSUH2 (ENSEASG00005013304) CAV3 (ENSEASG00005033820) OXTR (ENSEASG00005013312) RAD18 (ENSEASG00005013316) SRGAP3 (ENSEASG00005013321) THUMPD3 (ENSEASG00005013327) ENSEASG00005027715 SETD5 (ENSEASG00005013335) LHFPL4 (ENSEASG00005013343) MTMR14 (ENSEASG00005013346) CPNE9 (ENSEASG00005013424) BRPF1 (ENSEASG00005014142) OGG1 (ENSEASG00005014145) Horse MODERN SPECIES 7 ENSECAG00000027842 CNTN6 (ENSECAG00000015975) CNTN4 (ENSECAG00000009769) IL5RA (ENSECAG00000022503) TRNT1 (ENSECAG00000014420) CRBN (ENSECAG00000015422) LRRN1 (ENSECAG00000002874) ENSECAG00000011514 SUMF1 (ENSECAG00000020242) ITPR1 (ENSECAG00000020933) BHLHE40 (ENSECAG00000015069) ARL8B (ENSECAG00000013084) EDEM1 (ENSECAG00000023369) ENSECAG00000056332 ENSECAG00000048581 GRM7 (ENSECAG00000016171) ##22 LMCD1 (ENSECAG00000010791) SSUH2 (ENSECAG00000039589) CAV3 (ENSECAG00000020701) OXTR (ENSECAG00000017844) ENSECAG00000056983 RAD18 (ENSECAG00000010746) SRGAP3 (ENSECAG00000010118) THUMPD3 (ENSECAG00000002016) ENSECAG00000057920 SETD5 (ENSECAG00000016843) LHFPL4 (ENSECAG00000038489) MTMR14 (ENSECAG00000020625) CPNE9 (ENSECAG00000007471) BRPF1 (ENSECAG00000021020) OGG1 (ENSECAG00000010671) Chiroptera ANCESTRAL SPECIES 54 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Megabat MODERN SPECIES 3007 GRM7 (ENSPVAG00000013935) ##22 Microchiroptera ANCESTRAL SPECIES 16 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Greater horseshoe bat MODERN SPECIES 8 ENSRFEG00010020600 PBRM1 (ENSRFEG00010020466) UQCC5 (ENSRFEG00010020406) NT5DC2 (ENSRFEG00010020356) STAB1 (ENSRFEG00010018575) NISCH (ENSRFEG00010018464) TNNC1 (ENSRFEG00010018419) SEMA3G (ENSRFEG00010018373) PHF7 (ENSRFEG00010018334) BAP1 (ENSRFEG00010017990) DNAH1 (ENSRFEG00010017179) GLYCTK (ENSRFEG00010017030) ENSRFEG00010017009 WDR82 (ENSRFEG00010016964) PPM1M (ENSRFEG00010016849) GRM7 (ENSRFEG00010016395) ##22 LMCD1 (ENSRFEG00010016208) SSUH2 (ENSRFEG00010016053) CAV3 (ENSRFEG00010016003) OXTR (ENSRFEG00010015954) RAD18 (ENSRFEG00010015794) SRGAP3 (ENSRFEG00010015658) ENSRFEG00010015601 THUMPD3 (ENSRFEG00010015565) ENSRFEG00010015554 SETD5 (ENSRFEG00010015275) LHFPL4 (ENSRFEG00010015205) ENSRFEG00010015187 MTMR14 (ENSRFEG00010014861) CPNE9 (ENSRFEG00010014762) BRPF1 (ENSRFEG00010014594) Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 945 ENSMLUG00000022634 ##22 ENSMLUG00000030387 ##22 ENSMLUG00000017429 ##22 LMCD1 (ENSMLUG00000016476) SSUH2 (ENSMLUG00000016480) CAV3 (ENSMLUG00000024508) OXTR (ENSMLUG00000016492) RAD18 (ENSMLUG00000016494) SRGAP3 (ENSMLUG00000010338) THUMPD3 (ENSMLUG00000008538) SETD5 (ENSMLUG00000008573) LHFPL4 (ENSMLUG00000023073) ENSMLUG00000012935 CPNE9 (ENSMLUG00000012948) BRPF1 (ENSMLUG00000012954) OGG1 (ENSMLUG00000012962) CAMK1 (ENSMLUG00000012973) TADA3 (ENSMLUG00000012978) Microbat MODERN SPECIES 945 ENSMLUG00000022634 ##22 ENSMLUG00000030387 ##22 ENSMLUG00000017429 ##22 LMCD1 (ENSMLUG00000016476) SSUH2 (ENSMLUG00000016480) CAV3 (ENSMLUG00000024508) OXTR (ENSMLUG00000016492) RAD18 (ENSMLUG00000016494) SRGAP3 (ENSMLUG00000010338) THUMPD3 (ENSMLUG00000008538) SETD5 (ENSMLUG00000008573) LHFPL4 (ENSMLUG00000023073) ENSMLUG00000012935 CPNE9 (ENSMLUG00000012948) BRPF1 (ENSMLUG00000012954) OGG1 (ENSMLUG00000012962) Microbat MODERN SPECIES 945 ENSMLUG00000022634 ##22 ENSMLUG00000030387 ##22 ENSMLUG00000017429 ##22 LMCD1 (ENSMLUG00000016476) SSUH2 (ENSMLUG00000016480) CAV3 (ENSMLUG00000024508) OXTR (ENSMLUG00000016492) RAD18 (ENSMLUG00000016494) SRGAP3 (ENSMLUG00000010338) THUMPD3 (ENSMLUG00000008538) SETD5 (ENSMLUG00000008573) LHFPL4 (ENSMLUG00000023073) ENSMLUG00000012935 CPNE9 (ENSMLUG00000012948) BRPF1 (ENSMLUG00000012954) OGG1 (ENSMLUG00000012962) CAMK1 (ENSMLUG00000012973) Carnivora ANCESTRAL SPECIES 6 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Felidae ANCESTRAL SPECIES 17 ENSGT00940000160282 ENSGT00390000008694.b.b.d ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Cat MODERN SPECIES 1 ENSFCAG00000034166 CNTN6 (ENSFCAG00000015456) ENSFCAG00000052641 CNTN4 (ENSFCAG00000000649) IL5RA (ENSFCAG00000000652) TRNT1 (ENSFCAG00000026805) CRBN (ENSFCAG00000026512) LRRN1 (ENSFCAG00000029530) ENSFCAG00000037787 SUMF1 (ENSFCAG00000011512) ITPR1 (ENSFCAG00000002477) BHLHE40 (ENSFCAG00000034238) ARL8B (ENSFCAG00000000736) EDEM1 (ENSFCAG00000000737) ENSFCAG00000029757 GRM7 (ENSFCAG00000029003) ##22 LMCD1 (ENSFCAG00000014723) SSUH2 (ENSFCAG00000014724) CAV3 (ENSFCAG00000035688) OXTR (ENSFCAG00000014726) RAD18 (ENSFCAG00000025747) SRGAP3 (ENSFCAG00000008390) THUMPD3 (ENSFCAG00000006171) SETD5 (ENSFCAG00000005610) LHFPL4 (ENSFCAG00000029519) MTMR14 (ENSFCAG00000014190) CPNE9 (ENSFCAG00000018421) BRPF1 (ENSFCAG00000014191) OGG1 (ENSFCAG00000014192) CAMK1 (ENSFCAG00000014193) TADA3 (ENSFCAG00000014195) Panthera ANCESTRAL SPECIES 1 ENSGT00940000160282 ENSGT00390000008694.b.b.d ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000010799.u.b.a.b.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Tiger MODERN SPECIES 57 GRM7 (ENSPTIG00000015908) ##22 LMCD1 (ENSPTIG00000012417) SSUH2 (ENSPTIG00000011315) CAV3 (ENSPTIG00000010685) OXTR (ENSPTIG00000010242) RAD18 (ENSPTIG00000008602) SRGAP3 (ENSPTIG00000020357) THUMPD3 (ENSPTIG00000017923) SETD5 (ENSPTIG00000015757) LHFPL4 (ENSPTIG00000015274) ENSPTIG00000014911 MTMR14 (ENSPTIG00000009395) CPNE9 (ENSPTIG00000018787) BRPF1 (ENSPTIG00000014562) OGG1 (ENSPTIG00000012227) CAMK1 (ENSPTIG00000011640) Panthera_a ANCESTRAL SPECIES ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000010799.u.b.a.b.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b lion MODERN SPECIES 2 CHL1 (ENSPLOG00000003228) ENSPLOG00000003473 CNTN6 (ENSPLOG00000003490) ENSPLOG00000003587 CNTN4 (ENSPLOG00000003617) IL5RA (ENSPLOG00000003728) TRNT1 (ENSPLOG00000003771) CRBN (ENSPLOG00000003808) LRRN1 (ENSPLOG00000003838) ENSPLOG00000003853 SUMF1 (ENSPLOG00000003874) ITPR1 (ENSPLOG00000003942) BHLHE40 (ENSPLOG00000004020) ARL8B (ENSPLOG00000004035) EDEM1 (ENSPLOG00000004057) GRM7 (ENSPLOG00000004096) ##22 LMCD1 (ENSPLOG00000004127) SSUH2 (ENSPLOG00000004153) CAV3 (ENSPLOG00000004164) OXTR (ENSPLOG00000004169) RAD18 (ENSPLOG00000004183) SRGAP3 (ENSPLOG00000004214) THUMPD3 (ENSPLOG00000004248) SETD5 (ENSPLOG00000004271) MTMR14 (ENSPLOG00000004371) CPNE9 (ENSPLOG00000004451) BRPF1 (ENSPLOG00000004482) OGG1 (ENSPLOG00000004556) CAMK1 (ENSPLOG00000004587) TADA3 (ENSPLOG00000004596) ARPC4 (ENSPLOG00000004614) leopard MODERN SPECIES 114 GRM7 (ENSPPRG00000001163) ##22 LMCD1 (ENSPPRG00000002208) SSUH2 (ENSPPRG00000002754) CAV3 (ENSPPRG00000002936) OXTR (ENSPPRG00000002982) RAD18 (ENSPPRG00000004021) SRGAP3 (ENSPPRG00000007280) THUMPD3 (ENSPPRG00000008071) SETD5 (ENSPPRG00000008405) LHFPL4 (ENSPPRG00000008567) ENSPPRG00000009278 MTMR14 (ENSPPRG00000010211) CPNE9 (ENSPPRG00000013002) BRPF1 (ENSPPRG00000013919) OGG1 (ENSPPRG00000015892) CAMK1 (ENSPPRG00000018158) Caniformia ANCESTRAL SPECIES 4 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606.d ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Caniformia_b ANCESTRAL SPECIES 16 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606.d ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Ursidae ANCESTRAL SPECIES 11 ENSGT00940000160282 ENSGT00390000000263.fb.a ENSGT00940000160080.b ENSGT00940000160606.d ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Giant Panda MODERN SPECIES 14 ENSAMEG00000023576 ENSAMEG00000013402 CNTN6 (ENSAMEG00000014259) CNTN4 (ENSAMEG00000014387) IL5RA (ENSAMEG00000014490) TRNT1 (ENSAMEG00000014520) CRBN (ENSAMEG00000014541) LRRN1 (ENSAMEG00000018835) ENSAMEG00000015893 SUMF1 (ENSAMEG00000015897) ITPR1 (ENSAMEG00000015900) BHLHE40 (ENSAMEG00000016060) ARL8B (ENSAMEG00000026834) EDEM1 (ENSAMEG00000016099) ENSAMEG00000028093 GRM7 (ENSAMEG00000027634) ##22 LMCD1 (ENSAMEG00000012319) SSUH2 (ENSAMEG00000012342) CAV3 (ENSAMEG00000026850) RAD18 (ENSAMEG00000012375) SRGAP3 (ENSAMEG00000012398) THUMPD3 (ENSAMEG00000011321) SETD5 (ENSAMEG00000011307) LHFPL4 (ENSAMEG00000029596) MTMR14 (ENSAMEG00000016362) CPNE9 (ENSAMEG00000016320) BRPF1 (ENSAMEG00000016299) OGG1 (ENSAMEG00000016290) CAMK1 (ENSAMEG00000016268) TADA3 (ENSAMEG00000016252) ARPC4 (ENSAMEG00000016243) Ursus ANCESTRAL SPECIES 43 ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E.e ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Polar bear MODERN SPECIES 210 LRRN1 (ENSUMAG00000024226) ENSUMAG00000024224 ENSUMAG00000024223 SUMF1 (ENSUMAG00000024222) ITPR1 (ENSUMAG00000020523) BHLHE40 (ENSUMAG00000019582) ARL8B (ENSUMAG00000019574) EDEM1 (ENSUMAG00000019393) ENSUMAG00000019361 GRM7 (ENSUMAG00000019342) ##22 LMCD1 (ENSUMAG00000019308) SSUH2 (ENSUMAG00000019301) CAV3 (ENSUMAG00000019292) ENSUMAG00000019289 RAD18 (ENSUMAG00000019279) ENSUMAG00000019260 THUMPD3 (ENSUMAG00000019241) SETD5 (ENSUMAG00000019048) LHFPL4 (ENSUMAG00000019006) ENSUMAG00000019000 ENSUMAG00000018991 CPNE9 (ENSUMAG00000018922) ENSUMAG00000018897 OGG1 (ENSUMAG00000018883) CAMK1 (ENSUMAG00000018867) American black bear MODERN SPECIES 3142 ENSUAMG00000019944 ##22 Mustelinae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 American mink MODERN SPECIES 421 ENSNVIG00000024574 ENSNVIG00000024573 ENSNVIG00000024571 GRM7 (ENSNVIG00000024565) ##22 Ferret MODERN SPECIES 163 IL5RA (ENSMPUG00000017016) TRNT1 (ENSMPUG00000017017) CRBN (ENSMPUG00000017018) LRRN1 (ENSMPUG00000020111) ENSMPUG00000017019 ENSMPUG00000017021 SUMF1 (ENSMPUG00000017022) ENSMPUG00000017028 ITPR1 (ENSMPUG00000017024) BHLHE40 (ENSMPUG00000017029) ENSMPUG00000017030 ARL8B (ENSMPUG00000017035) EDEM1 (ENSMPUG00000017042) ENSMPUG00000017055 ENSMPUG00000020112 GRM7 (ENSMPUG00000017057) ##22 ENSMPUG00000020113 LMCD1 (ENSMPUG00000017058) SSUH2 (ENSMPUG00000017059) CAV3 (ENSMPUG00000017061) OXTR (ENSMPUG00000017062) RAD18 (ENSMPUG00000017063) SRGAP3 (ENSMPUG00000017064) ENSMPUG00000017065 ENSMPUG00000017066 SETD5 (ENSMPUG00000017067) LHFPL4 (ENSMPUG00000017068) ENSMPUG00000017069 MTMR14 (ENSMPUG00000017070) CPNE9 (ENSMPUG00000017072) BRPF1 (ENSMPUG00000017121) Canidae ANCESTRAL SPECIES ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606.d ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Red fox MODERN SPECIES 130 GRM7 (ENSVVUG00000025363) ##22 LMCD1 (ENSVVUG00000025343) SSUH2 (ENSVVUG00000025339) CAV3 (ENSVVUG00000025336) OXTR (ENSVVUG00000025334) RAD18 (ENSVVUG00000025318) SRGAP3 (ENSVVUG00000025299) THUMPD3 (ENSVVUG00000025278) SETD5 (ENSVVUG00000025086) LHFPL4 (ENSVVUG00000025065) MTMR14 (ENSVVUG00000024522) CPNE9 (ENSVVUG00000023992) BRPF1 (ENSVVUG00000023771) OGG1 (ENSVVUG00000023761) CAMK1 (ENSVVUG00000023754) ENSVVUG00000023752 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606.d ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00550000074855.u.a.a.a.a.b ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.c.a ENSGT00390000018852.d ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 Dog MODERN SPECIES 12 CNTN6 (ENSCAFG00845005936) CNTN4 (ENSCAFG00845012710) IL5RA (ENSCAFG00845012603) TRNT1 (ENSCAFG00845012496) CRBN (ENSCAFG00845012410) ENSCAFG00845012385 LRRN1 (ENSCAFG00845012344) SETMAR (ENSCAFG00845012243) ENSCAFG00845012212 SUMF1 (ENSCAFG00845012121) ITPR1 (ENSCAFG00845011583) BHLHE40 (ENSCAFG00845011295) ARL8B (ENSCAFG00845011245) EDEM1 (ENSCAFG00845011142) ENSCAFG00845011042 GRM7 (ENSCAFG00845010858) ##22 LMCD1 (ENSCAFG00845010761) SSUH2 (ENSCAFG00845010670) PSMA1 (ENSCAFG00845010623) CAV3 (ENSCAFG00845010595) OXTR (ENSCAFG00845010546) RAD18 (ENSCAFG00845010415) SRGAP3 (ENSCAFG00845010252) THUMPD3 (ENSCAFG00845010175) SETD5 (ENSCAFG00845009873) LHFPL4 (ENSCAFG00845009723) MTMR14 (ENSCAFG00845009554) CPNE9 (ENSCAFG00845009431) BRPF1 (ENSCAFG00845009250) OGG1 (ENSCAFG00845009193) CAMK1 (ENSCAFG00845009151) Dingo DUPLICATION Dingo MODERN SPECIES 236 ENSCAFG00020015018 ENSCAFG00020015005 CNTN4 (ENSCAFG00020014776) IL5RA (ENSCAFG00020014747) TRNT1 (ENSCAFG00020014746) CRBN (ENSCAFG00020014744) LRRN1 (ENSCAFG00020014742) ENSCAFG00020014740 SUMF1 (ENSCAFG00020014738) ITPR1 (ENSCAFG00020009780) BHLHE40 (ENSCAFG00020009373) ARL8B (ENSCAFG00020009368) EDEM1 (ENSCAFG00020009305) ENSCAFG00020009301 ENSCAFG00020009294 ##22 GRM7 (ENSCAFG00020009277) ##22 LMCD1 (ENSCAFG00020009259) SSUH2 (ENSCAFG00020009247) ENSCAFG00020009244 CAV3 (ENSCAFG00020009240) OXTR (ENSCAFG00020009232) ENSCAFG00020009230 RAD18 (ENSCAFG00020009228) SRGAP3 (ENSCAFG00020008925) ENSCAFG00020008895 SETD5 (ENSCAFG00020008878) LHFPL4 (ENSCAFG00020008865) ENSCAFG00020008806 ENSCAFG00020008718 CPNE9 (ENSCAFG00020008664) BRPF1 (ENSCAFG00020008649) Dingo MODERN SPECIES 236 CHL1 (ENSCAFG00020015069) ENSCAFG00020015018 ENSCAFG00020015005 CNTN4 (ENSCAFG00020014776) IL5RA (ENSCAFG00020014747) TRNT1 (ENSCAFG00020014746) CRBN (ENSCAFG00020014744) LRRN1 (ENSCAFG00020014742) ENSCAFG00020014740 SUMF1 (ENSCAFG00020014738) ITPR1 (ENSCAFG00020009780) BHLHE40 (ENSCAFG00020009373) ARL8B (ENSCAFG00020009368) EDEM1 (ENSCAFG00020009305) ENSCAFG00020009301 ENSCAFG00020009294 ##22 GRM7 (ENSCAFG00020009277) ##22 LMCD1 (ENSCAFG00020009259) SSUH2 (ENSCAFG00020009247) ENSCAFG00020009244 CAV3 (ENSCAFG00020009240) OXTR (ENSCAFG00020009232) ENSCAFG00020009230 RAD18 (ENSCAFG00020009228) SRGAP3 (ENSCAFG00020008925) ENSCAFG00020008895 SETD5 (ENSCAFG00020008878) LHFPL4 (ENSCAFG00020008865) ENSCAFG00020008806 ENSCAFG00020008718 CPNE9 (ENSCAFG00020008664) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Suina ANCESTRAL SPECIES 1 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Chacoan peccary MODERN SPECIES 950 CNTN3 (ENSCWAG00000020972) CHL1 (ENSCWAG00000021043) CNTN6 (ENSCWAG00000021190) ENSCWAG00000021205 CNTN4 (ENSCWAG00000021224) IL5RA (ENSCWAG00000021262) TRNT1 (ENSCWAG00000021303) CRBN (ENSCWAG00000021315) LRRN1 (ENSCWAG00000021333) ENSCWAG00000021337 SUMF1 (ENSCWAG00000021351) ITPR1 (ENSCWAG00000021394) BHLHE40 (ENSCWAG00000021441) ARL8B (ENSCWAG00000021449) EDEM1 (ENSCWAG00000021462) GRM7 (ENSCWAG00000021475) ##22 LMCD1 (ENSCWAG00000021516) ENSCWAG00000021523 SSUH2 (ENSCWAG00000021528) CAV3 (ENSCWAG00000021533) OXTR (ENSCWAG00000021536) RAD18 (ENSCWAG00000021543) SRGAP3 (ENSCWAG00000021560) THUMPD3 (ENSCWAG00000021592) SETD5 (ENSCWAG00000021607) LHFPL4 (ENSCWAG00000021645) MTMR14 (ENSCWAG00000021653) CPNE9 (ENSCWAG00000021671) BRPF1 (ENSCWAG00000021682) OGG1 (ENSCWAG00000021683) CAMK1 (ENSCWAG00000021688) Pig MODERN SPECIES 4 CNTN6 (ENSSSCG00000038152) ENSSSCG00000050505 CNTN4 (ENSSSCG00000011527) IL5RA (ENSSSCG00000011528) TRNT1 (ENSSSCG00000011529) CRBN (ENSSSCG00000011530) ENSSSCG00000041465 LRRN1 (ENSSSCG00000023806) ENSSSCG00000011531 SUMF1 (ENSSSCG00000011532) ITPR1 (ENSSSCG00000023437) BHLHE40 (ENSSSCG00000036136) ARL8B (ENSSSCG00000011535) ENSSSCG00000044623 EDEM1 (ENSSSCG00000034197) GRM7 (ENSSSCG00000023891) ##22 LMCD1 (ENSSSCG00000011538) SSUH2 (ENSSSCG00000023082) CAV3 (ENSSSCG00000056902) OXTR (ENSSSCG00000021585) RAD18 (ENSSSCG00000026158) SRGAP3 (ENSSSCG00000033624) THUMPD3 (ENSSSCG00000011542) SETD5 (ENSSSCG00000011540) LHFPL4 (ENSSSCG00000011543) MTMR14 (ENSSSCG00000011546) CPNE9 (ENSSSCG00000054876) BRPF1 (ENSSSCG00000011548) ENSSSCG00000011549 CAMK1 (ENSSSCG00000011550) TTLL3 (ENSSSCG00000011552) Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Pecora ANCESTRAL SPECIES 17 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Yarkand deer MODERN SPECIES 16 ENSCHYG00000026685 ENSCHYG00000026687 CNTN4 (ENSCHYG00000026696) IL5RA (ENSCHYG00000026716) TRNT1 (ENSCHYG00000026731) CRBN (ENSCHYG00000026738) ENSCHYG00000026754 ENSCHYG00000026764 ENSCHYG00000026769 SUMF1 (ENSCHYG00000026779) ITPR1 (ENSCHYG00000026821) BHLHE40 (ENSCHYG00000026844) ARL8B (ENSCHYG00000026850) EDEM1 (ENSCHYG00000026855) ENSCHYG00000026863 GRM7 (ENSCHYG00000026874) ##22 LMCD1 (ENSCHYG00000026896) SSUH2 (ENSCHYG00000026901) CAV3 (ENSCHYG00000026911) OXTR (ENSCHYG00000026918) RAD18 (ENSCHYG00000026923) SRGAP3 (ENSCHYG00000013878) THUMPD3 (ENSCHYG00000014272) SETD5 (ENSCHYG00000014430) LHFPL4 (ENSCHYG00000015163) MTMR14 (ENSCHYG00000015234) CPNE9 (ENSCHYG00000016206) BRPF1 (ENSCHYG00000017308) OGG1 (ENSCHYG00000017407) CAMK1 (ENSCHYG00000017644) ENSCHYG00000017747 Percora_a ANCESTRAL SPECIES 19 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Siberian musk deer MODERN SPECIES 1217 CNTN6 (ENSMMSG00000023002) ENSMMSG00000023026 CNTN4 (ENSMMSG00000023037) IL5RA (ENSMMSG00000023050) TRNT1 (ENSMMSG00000023102) CRBN (ENSMMSG00000023112) LRRN1 (ENSMMSG00000023149) ENSMMSG00000023154 SUMF1 (ENSMMSG00000023161) ITPR1 (ENSMMSG00000023236) BHLHE40 (ENSMMSG00000023362) ARL8B (ENSMMSG00000023368) EDEM1 (ENSMMSG00000023381) GRM7 (ENSMMSG00000023416) ##22 ENSMMSG00000023445 LMCD1 (ENSMMSG00000023464) SSUH2 (ENSMMSG00000023483) CAV3 (ENSMMSG00000023491) OXTR (ENSMMSG00000023495) RAD18 (ENSMMSG00000023505) SRGAP3 (ENSMMSG00000023532) THUMPD3 (ENSMMSG00000023573) SETD5 (ENSMMSG00000023589) LHFPL4 (ENSMMSG00000023624) MTMR14 (ENSMMSG00000023637) CPNE9 (ENSMMSG00000023665) BRPF1 (ENSMMSG00000023702) OGG1 (ENSMMSG00000023712) CAMK1 (ENSMMSG00000023717) Bovidae ANCESTRAL SPECIES 19 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Bovinae ANCESTRAL SPECIES 16 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00960000191185 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Bos ANCESTRAL SPECIES 16 ENSGT00940000160080 ENSGT00940000160606.b ENSGT00940000160606.a.a ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000162732 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.b ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00960000191185 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Bos_a ANCESTRAL SPECIES 9 ENSGT00940000160080 ENSGT00940000160606.b ENSGT00940000160606.a.a ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000162732 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.b ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Wild yak MODERN SPECIES 730 ENSBMUG00000001592 ENSBMUG00000001582 GRM7 (ENSBMUG00000001513) ##22 LMCD1 (ENSBMUG00000001354) SSUH2 (ENSBMUG00000001321) Domestic yak MODERN SPECIES 14 CNTN4 (ENSBGRG00000023008) IL5RA (ENSBGRG00000023363) TRNT1 (ENSBGRG00000023414) ENSBGRG00000023555 CRBN (ENSBGRG00000023591) LRRN1 (ENSBGRG00000023800) ENSBGRG00000023820 ENSBGRG00000023834 ENSBGRG00000023871 ENSBGRG00000023884 SUMF1 (ENSBGRG00000023916) ITPR1 (ENSBGRG00000024500) BHLHE40 (ENSBGRG00000026121) ARL8B (ENSBGRG00000026129) EDEM1 (ENSBGRG00000026138) GRM7 (ENSBGRG00000026154) ##22 ENSBGRG00000026180 ENSBGRG00000026184 LMCD1 (ENSBGRG00000006947) SSUH2 (ENSBGRG00000007163) CAV3 (ENSBGRG00000007247) OXTR (ENSBGRG00000007298) RAD18 (ENSBGRG00000007350) SRGAP3 (ENSBGRG00000007703) ENSBGRG00000008258 THUMPD3 (ENSBGRG00000008275) SETD5 (ENSBGRG00000008315) LHFPL4 (ENSBGRG00000008472) MTMR14 (ENSBGRG00000008560) CPNE9 (ENSBGRG00000009213) BRPF1 (ENSBGRG00000009674) Bos_b ANCESTRAL SPECIES 17 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 ENSGT00940000160606.a.a ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00940000162732 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.b ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00960000191185 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Hybrid Bos Indicus MODERN SPECIES 14 CNTN6 (ENSBIXG00005031434) CNTN4 (ENSBIXG00005031442) IL5RA (ENSBIXG00005031445) TRNT1 (ENSBIXG00005031446) CRBN (ENSBIXG00005031447) LRRN1 (ENSBIXG00005031456) ENSBIXG00005031458 SUMF1 (ENSBIXG00005031466) ENSBIXG00005031470 ENSBIXG00005031471 ITPR1 (ENSBIXG00005031482) BHLHE40 (ENSBIXG00005031493) ARL8B (ENSBIXG00005031495) EDEM1 (ENSBIXG00005001970) ENSBIXG00005029056 GRM7 (ENSBIXG00005028996) ##22 LMCD1 (ENSBIXG00005005060) SSUH2 (ENSBIXG00005028895) CAV3 (ENSBIXG00005002263) OXTR (ENSBIXG00005028862) RAD18 (ENSBIXG00005002314) SRGAP3 (ENSBIXG00005005347) THUMPD3 (ENSBIXG00005028624) SETD5 (ENSBIXG00005028549) LHFPL4 (ENSBIXG00005004877) MTMR14 (ENSBIXG00005028344) ENSBIXG00005028281 CPNE9 (ENSBIXG00005028262) BRPF1 (ENSBIXG00005028097) OGG1 (ENSBIXG00005004820) CAMK1 (ENSBIXG00005028008) Cow MODERN SPECIES 14 ENSBTAG00000006727 CNTN6 (ENSBTAG00000003592) CNTN4 (ENSBTAG00000033225) IL5RA (ENSBTAG00000000273) TRNT1 (ENSBTAG00000019534) CRBN (ENSBTAG00000019536) LRRN1 (ENSBTAG00000001176) SETMAR (ENSBTAG00000018935) ENSBTAG00000034496 SUMF1 (ENSBTAG00000039855) ITPR1 (ENSBTAG00000020455) BHLHE40 (ENSBTAG00000009863) ARL8B (ENSBTAG00000012902) ENSBTAG00000052329 EDEM1 (ENSBTAG00000012904) GRM7 (ENSBTAG00000013047) ##22 LMCD1 (ENSBTAG00000005431) SSUH2 (ENSBTAG00000005433) CAV3 (ENSBTAG00000022699) OXTR (ENSBTAG00000019772) RAD18 (ENSBTAG00000012142) SRGAP3 (ENSBTAG00000004685) THUMPD3 (ENSBTAG00000003112) SETD5 (ENSBTAG00000019193) LHFPL4 (ENSBTAG00000010916) ENSBTAG00000048523 MTMR14 (ENSBTAG00000009765) CPNE9 (ENSBTAG00000011551) BRPF1 (ENSBTAG00000007776) OGG1 (ENSBTAG00000007777) CAMK1 (ENSBTAG00000007780) American bison MODERN SPECIES 3349 GRM7 (ENSBBBG00000002872) ##22 LMCD1 (ENSBBBG00000007078) SSUH2 (ENSBBBG00000014589) CAV3 (ENSBBBG00000014598) OXTR (ENSBBBG00000014600) RAD18 (ENSBBBG00000014638) SRGAP3 (ENSBBBG00000014747) ENSBBBG00000014775 ENSBBBG00000014779 ENSBBBG00000008911 ENSBBBG00000007134 ENSBBBG00000003641 ENSBBBG00000014797 ENSBBBG00000014809 ENSBBBG00000002816 ENSBBBG00000014850 Caprinae ANCESTRAL SPECIES 15 ENSGT00940000165570 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Rambouillet Sheep MODERN SPECIES 10 CHL1 (ENSOARG00020015831) CNTN6 (ENSOARG00020015543) ENSOARG00020015490 CNTN4 (ENSOARG00020015064) TRNT1 (ENSOARG00020014826) CRBN (ENSOARG00020014355) ENSOARG00020014311 LRRN1 (ENSOARG00020014291) ENSOARG00020014205 SUMF1 (ENSOARG00020014038) ITPR1 (ENSOARG00020012519) BHLHE40 (ENSOARG00020012417) ARL8B (ENSOARG00020012288) EDEM1 (ENSOARG00020012137) ENSOARG00020012075 GRM7 (ENSOARG00020011716) ##22 LMCD1 (ENSOARG00020011551) SSUH2 (ENSOARG00020011381) CAV3 (ENSOARG00020011348) OXTR (ENSOARG00020011329) RAD18 (ENSOARG00020011184) SRGAP3 (ENSOARG00020010228) THUMPD3 (ENSOARG00020025485) SETD5 (ENSOARG00020025409) LHFPL4 (ENSOARG00020025385) MTMR14 (ENSOARG00020025368) CPNE9 (ENSOARG00020025304) BRPF1 (ENSOARG00020025261) OGG1 (ENSOARG00020025235) CAMK1 (ENSOARG00020025222) TADA3 (ENSOARG00020025208) Goat DUPLICATION Goat MODERN SPECIES 14 CNTN6 (ENSCHIG00000024913) CNTN4 (ENSCHIG00000018077) IL5RA (ENSCHIG00000011708) TRNT1 (ENSCHIG00000007030) CRBN (ENSCHIG00000022897) ENSCHIG00000017211 LRRN1 (ENSCHIG00000009563) ENSCHIG00000019739 SUMF1 (ENSCHIG00000026539) ITPR1 (ENSCHIG00000018318) BHLHE40 (ENSCHIG00000014557) ARL8B (ENSCHIG00000011960) EDEM1 (ENSCHIG00000011192) ENSCHIG00000008494 ##22 ENSCHIG00000021691 GRM7 (ENSCHIG00000000474) ##22 LMCD1 (ENSCHIG00000012706) SSUH2 (ENSCHIG00000021708) CAV3 (ENSCHIG00000010009) OXTR (ENSCHIG00000007774) RAD18 (ENSCHIG00000007965) ENSCHIG00000016941 SRGAP3 (ENSCHIG00000019201) THUMPD3 (ENSCHIG00000024037) ENSCHIG00000010782 SETD5 (ENSCHIG00000025966) LHFPL4 (ENSCHIG00000018946) MTMR14 (ENSCHIG00000016043) CPNE9 (ENSCHIG00000023346) BRPF1 (ENSCHIG00000013470) OGG1 (ENSCHIG00000022673) Goat MODERN SPECIES 14 CNTN3 (ENSCHIG00000015485) CHL1 (ENSCHIG00000015409) CNTN6 (ENSCHIG00000024913) CNTN4 (ENSCHIG00000018077) IL5RA (ENSCHIG00000011708) TRNT1 (ENSCHIG00000007030) CRBN (ENSCHIG00000022897) ENSCHIG00000017211 LRRN1 (ENSCHIG00000009563) ENSCHIG00000019739 SUMF1 (ENSCHIG00000026539) ITPR1 (ENSCHIG00000018318) BHLHE40 (ENSCHIG00000014557) ARL8B (ENSCHIG00000011960) EDEM1 (ENSCHIG00000011192) ENSCHIG00000008494 ##22 ENSCHIG00000021691 GRM7 (ENSCHIG00000000474) ##22 LMCD1 (ENSCHIG00000012706) SSUH2 (ENSCHIG00000021708) CAV3 (ENSCHIG00000010009) OXTR (ENSCHIG00000007774) RAD18 (ENSCHIG00000007965) ENSCHIG00000016941 SRGAP3 (ENSCHIG00000019201) THUMPD3 (ENSCHIG00000024037) ENSCHIG00000010782 SETD5 (ENSCHIG00000025966) LHFPL4 (ENSCHIG00000018946) MTMR14 (ENSCHIG00000016043) CPNE9 (ENSCHIG00000023346) Cetacea ANCESTRAL SPECIES 7 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00940000156539.r ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Blue whale MODERN SPECIES 2 CNTN3 (ENSBMSG00010021994) ENSBMSG00010022002 CHL1 (ENSBMSG00010022027) CNTN6 (ENSBMSG00010022054) CNTN4 (ENSBMSG00010022067) IL5RA (ENSBMSG00010022077) TRNT1 (ENSBMSG00010022089) CRBN (ENSBMSG00010022093) LRRN1 (ENSBMSG00010022098) ENSBMSG00010022101 SUMF1 (ENSBMSG00010022107) ENSBMSG00010022122 BHLHE40 (ENSBMSG00010022124) ARL8B (ENSBMSG00010022125) EDEM1 (ENSBMSG00010022127) GRM7 (ENSBMSG00010022139) ##22 ENSBMSG00010022144 LMCD1 (ENSBMSG00010022145) SSUH2 (ENSBMSG00010022152) CAV3 (ENSBMSG00010022159) OXTR (ENSBMSG00010022161) RAD18 (ENSBMSG00010022168) SRGAP3 (ENSBMSG00010022181) THUMPD3 (ENSBMSG00010022188) SETD5 (ENSBMSG00010022193) LHFPL4 (ENSBMSG00010022197) ENSBMSG00010022205 MTMR14 (ENSBMSG00010022211) CPNE9 (ENSBMSG00010022216) BRPF1 (ENSBMSG00010022222) OGG1 (ENSBMSG00010022236) Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00940000156539.r ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Sperm whale MODERN SPECIES 9 ENSPCTG00005016393 CNTN6 (ENSPCTG00005016124) CNTN4 (ENSPCTG00005011901) IL5RA (ENSPCTG00005011305) TRNT1 (ENSPCTG00005011251) CRBN (ENSPCTG00005011120) LRRN1 (ENSPCTG00005011097) ENSPCTG00005011064 SUMF1 (ENSPCTG00005010949) ENSPCTG00005010893 BHLHE40 (ENSPCTG00005010857) ARL8B (ENSPCTG00005010834) EDEM1 (ENSPCTG00005010722) ENSPCTG00005010694 ENSPCTG00005010665 GRM7 (ENSPCTG00005010372) ##22 ENSPCTG00005010301 ENSPCTG00005010267 CAV3 (ENSPCTG00005010229) OXTR (ENSPCTG00005010180) RAD18 (ENSPCTG00005009968) THUMPD3 (ENSPCTG00005009829) SETD5 (ENSPCTG00005009250) LHFPL4 (ENSPCTG00005009157) ENSPCTG00005009141 MTMR14 (ENSPCTG00005008799) BRPF1 (ENSPCTG00005008668) OGG1 (ENSPCTG00005008438) CAMK1 (ENSPCTG00005008369) TADA3 (ENSPCTG00005008328) ARPC4 (ENSPCTG00005008277) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00940000156539.r ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Dolphin MODERN SPECIES 2525 GRM7 (ENSTTRG00000016681) ##22 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000168733 ENSGT00940000160080 ENSGT00940000160606 ENSGT01000000221469 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00940000156539.r ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b Monodontidae ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Narwhal DUPLICATION Narwhal MODERN SPECIES 244 ENSMMNG00015000712 ##22 Narwhal MODERN SPECIES 310 ENSMMNG00015020993 CHL1 (ENSMMNG00015021112) CNTN6 (ENSMMNG00015021308) ENSMMNG00015021339 CNTN4 (ENSMMNG00015021354) IL5RA (ENSMMNG00015021373) TRNT1 (ENSMMNG00015021404) CRBN (ENSMMNG00015021425) LRRN1 (ENSMMNG00015021441) ENSMMNG00015021455 SUMF1 (ENSMMNG00015021480) ITPR1 (ENSMMNG00015021764) BHLHE40 (ENSMMNG00015021940) EDEM1 (ENSMMNG00015021945) ENSMMNG00015021948 GRM7 (ENSMMNG00015021949) ##22 ENSMMNG00015021951 LMCD1 (ENSMMNG00015021953) SSUH2 (ENSMMNG00015021955) CAV3 (ENSMMNG00015021970) OXTR (ENSMMNG00015021973) RAD18 (ENSMMNG00015021977) SRGAP3 (ENSMMNG00015021982) THUMPD3 (ENSMMNG00015021984) SETD5 (ENSMMNG00015009941) ENSMMNG00015010075 MTMR14 (ENSMMNG00015010221) CPNE9 (ENSMMNG00015010323) BRPF1 (ENSMMNG00015010418) OGG1 (ENSMMNG00015010484) CAMK1 (ENSMMNG00015010534) Narwhal DUPLICATION Narwhal MODERN SPECIES 168 ENSMMNG00015002830 ##22 Narwhal MODERN SPECIES 164 ENSMMNG00015002793 ##22 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 113 GRM7 (ENSDLEG00000008127) ##22 ENSDLEG00000008198 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 184 ENSDLEG00000018491 ##22 Beluga whale MODERN SPECIES 134 ENSDLEG00000008345 ##22 Vaquita DUPLICATION Vaquita MODERN SPECIES 2 CNTN6 (ENSPSNG00000021579) ENSPSNG00000021554 CNTN4 (ENSPSNG00000021522) IL5RA (ENSPSNG00000021430) TRNT1 (ENSPSNG00000021385) CRBN (ENSPSNG00000021316) LRRN1 (ENSPSNG00000021271) ENSPSNG00000021260 SUMF1 (ENSPSNG00000021203) ITPR1 (ENSPSNG00000020755) BHLHE40 (ENSPSNG00000020577) ARL8B (ENSPSNG00000020515) EDEM1 (ENSPSNG00000020473) ENSPSNG00000020429 ENSPSNG00000020416 GRM7 (ENSPSNG00000020266) ##22 LMCD1 (ENSPSNG00000020193) SSUH2 (ENSPSNG00000020116) CAV3 (ENSPSNG00000020071) OXTR (ENSPSNG00000020047) RAD18 (ENSPSNG00000019957) SRGAP3 (ENSPSNG00000019609) THUMPD3 (ENSPSNG00000019527) SETD5 (ENSPSNG00000019261) LHFPL4 (ENSPSNG00000019162) ENSPSNG00000019129 MTMR14 (ENSPSNG00000018998) CPNE9 (ENSPSNG00000018631) BRPF1 (ENSPSNG00000018490) OGG1 (ENSPSNG00000018217) CAMK1 (ENSPSNG00000018141) Vaquita MODERN SPECIES 4 ENSPSNG00000013284 SLC4A5 (ENSPSNG00000012412) MTHFD2 (ENSPSNG00000012222) MOB1A (ENSPSNG00000012154) ENSPSNG00000012096 TET3 (ENSPSNG00000011888) DGUOK (ENSPSNG00000011764) ACTG2 (ENSPSNG00000011617) ENSPSNG00000011509 STAMBP (ENSPSNG00000011437) ENSPSNG00000011335 DUSP11 (ENSPSNG00000011224) TPRKB (ENSPSNG00000011166) ENSPSNG00000011132 ENSPSNG00000011057 ENSPSNG00000011021 ##22 ENSPSNG00000010962 ENSPSNG00000010914 ENSPSNG00000010874 ALMS1 (ENSPSNG00000010790) EGR4 (ENSPSNG00000010696) FBXO41 (ENSPSNG00000010548) ENSPSNG00000010519 CCT7 (ENSPSNG00000010258) PRADC1 (ENSPSNG00000010164) SMYD5 (ENSPSNG00000010059) NOTO (ENSPSNG00000009962) RAB11FIP5 (ENSPSNG00000009877) SFXN5 (ENSPSNG00000009721) EMX1 (ENSPSNG00000009636) SPR (ENSPSNG00000009589) Camelidae ANCESTRAL SPECIES 7 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Alpaca MODERN SPECIES 2580 GRM7 (ENSVPAG00000009635) ##22 Arabian camel MODERN SPECIES 8 CNTN6 (ENSCDRG00005006079) ENSCDRG00005006107 CNTN4 (ENSCDRG00005006128) TRNT1 (ENSCDRG00005006181) IL5RA (ENSCDRG00005006219) CRBN (ENSCDRG00005006474) LRRN1 (ENSCDRG00005006616) ENSCDRG00005006638 ENSCDRG00005006687 SUMF1 (ENSCDRG00005006754) ITPR1 (ENSCDRG00005006971) BHLHE40 (ENSCDRG00005007592) ARL8B (ENSCDRG00005007624) EDEM1 (ENSCDRG00005007706) ENSCDRG00005007733 GRM7 (ENSCDRG00005007785) ##22 LMCD1 (ENSCDRG00005008646) SSUH2 (ENSCDRG00005008739) CAV3 (ENSCDRG00005008785) OXTR (ENSCDRG00005008802) RAD18 (ENSCDRG00005008867) SRGAP3 (ENSCDRG00005009310) THUMPD3 (ENSCDRG00005009741) SETD5 (ENSCDRG00005009836) LHFPL4 (ENSCDRG00005010279) MTMR14 (ENSCDRG00005010357) CPNE9 (ENSCDRG00005010789) BRPF1 (ENSCDRG00005010992) OGG1 (ENSCDRG00005011148) ENSCDRG00005011303 TADA3 (ENSCDRG00005011346) Eulipotyphla ANCESTRAL SPECIES ENSGT01030000234648.a.a.d ##22 Common shrew MODERN SPECIES 6346 GRM7 (ENSSARG00000010341) ##22 Hedgehog MODERN SPECIES 8070 GRM7 (ENSEEUG00000004868) ##22 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Tree shrew MODERN SPECIES 4873 GRM7 (ENSTBEG00000013304) ##22 Glires ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Rodentia ANCESTRAL SPECIES 2 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Kangaroo rat MODERN SPECIES 331 Pdzrn3 (ENSDORG00000002686) Cntn3 (ENSDORG00000000121) Chl1 (ENSDORG00000010546) Cntn6 (ENSDORG00000005702) Cntn4 (ENSDORG00000014028) Il5ra (ENSDORG00000014033) Trnt1 (ENSDORG00000014035) Crbn (ENSDORG00000014038) Lrrn1 (ENSDORG00000023814) Setmar (ENSDORG00000026212) Sumf1 (ENSDORG00000006695) Itpr1 (ENSDORG00000005966) Bhlhe40 (ENSDORG00000028127) Arl8b (ENSDORG00000023904) Edem1 (ENSDORG00000002004) Grm7 (ENSDORG00000007450) ##22 Lmcd1 (ENSDORG00000003932) Ssu2 (ENSDORG00000009888) Cav3 (ENSDORG00000023359) Oxtr (ENSDORG00000007711) ENSDORG00000029722 Rad18 (ENSDORG00000001099) ENSDORG00000001101 Thumpd3 (ENSDORG00000003257) Setd5 (ENSDORG00000003260) Lhfpl4 (ENSDORG00000009115) Mtmr14 (ENSDORG00000011006) Cpne9 (ENSDORG00000011008) Brpf1 (ENSDORG00000011011) Ogg1 (ENSDORG00000011013) Camk1 (ENSDORG00000011016) Myomorpha ANCESTRAL SPECIES 36 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Lesser Egyptian jerboa MODERN SPECIES 45 Cntn4 (ENSJJAG00000023102) Il5ra (ENSJJAG00000010396) Trnt1 (ENSJJAG00000018561) Crbn (ENSJJAG00000011234) ENSJJAG00000004639 Lrrn1 (ENSJJAG00000021670) Setmar (ENSJJAG00000024359) Sumf1 (ENSJJAG00000014950) Itpr1 (ENSJJAG00000021325) ENSJJAG00000015303 ENSJJAG00000022672 Arl8b (ENSJJAG00000017608) Edem1 (ENSJJAG00000007371) ENSJJAG00000015222 ENSJJAG00000017538 Grm7 (ENSJJAG00000023200) ##22 ENSJJAG00000016367 Lmcd1 (ENSJJAG00000016825) Ssu2 (ENSJJAG00000023516) Cav3 (ENSJJAG00000024313) Oxtr (ENSJJAG00000016459) ENSJJAG00000021410 Rad18 (ENSJJAG00000001484) ENSJJAG00000000240 Srgap3 (ENSJJAG00000011741) ENSJJAG00000022541 ENSJJAG00000014704 Thumpd3 (ENSJJAG00000017751) Setd5 (ENSJJAG00000014155) Lhfpl4 (ENSJJAG00000020034) Mtmr14 (ENSJJAG00000014129) Muroidea ANCESTRAL SPECIES 37 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Upper Galilee mountains blind mole rat MODERN SPECIES 1707 Grm7 (ENSNGAG00000022295) ##22 ENSNGAG00000000864 Lmcd1 (ENSNGAG00000005048) Ssu2 (ENSNGAG00000007680) Cav3 (ENSNGAG00000022726) Oxtr (ENSNGAG00000023128) Rad18 (ENSNGAG00000012464) Srgap3 (ENSNGAG00000020921) ENSNGAG00000021014 Setd5 (ENSNGAG00000021493) Lhfpl4 (ENSNGAG00000023038) Mtmr14 (ENSNGAG00000012586) Cpne9 (ENSNGAG00000016783) Brpf1 (ENSNGAG00000009975) Ogg1 (ENSNGAG00000020036) Camk1 (ENSNGAG00000023744) Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Cricetinae ANCESTRAL SPECIES 8 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Golden Hamster MODERN SPECIES 622 Cibar1 (ENSMAUG00000009551) Triqk (ENSMAUG00000012998) Cntn4 (ENSMAUG00000009508) Il5ra (ENSMAUG00000021101) Trnt1 (ENSMAUG00000020707) Crbn (ENSMAUG00000001100) Lrrn1 (ENSMAUG00000005827) ENSMAUG00000009893 Setmar (ENSMAUG00000020081) Sumf1 (ENSMAUG00000014146) Itpr1 (ENSMAUG00000016842) Bhlhe40 (ENSMAUG00000009803) Arl8b (ENSMAUG00000016691) Edem1 (ENSMAUG00000008525) ENSMAUG00000019900 Grm7 (ENSMAUG00000021392) ##22 Lmcd1 (ENSMAUG00000014020) Ssu2 (ENSMAUG00000020801) Cav3 (ENSMAUG00000019157) Oxtr (ENSMAUG00000020582) Rad18 (ENSMAUG00000020642) Srgap3 (ENSMAUG00000020606) Thumpd3 (ENSMAUG00000012250) Setd5 (ENSMAUG00000016093) Lhfpl4 (ENSMAUG00000017801) ENSMAUG00000018733 ENSMAUG00000018826 Cpne9 (ENSMAUG00000010261) Brpf1 (ENSMAUG00000020760) Camk1 (ENSMAUG00000007551) Tada3 (ENSMAUG00000014747) Chinese hamster chok1gshd MODERN SPECIES 144 Chl1 (ENSCGRG00001021609) Cntn6 (ENSCGRG00001012547) Cntn4 (ENSCGRG00001005552) Il5ra (ENSCGRG00001023890) Trnt1 (ENSCGRG00001009998) Crbn (ENSCGRG00001014850) Lrrn1 (ENSCGRG00001000760) ENSCGRG00001003904 Setmar (ENSCGRG00001005415) Sumf1 (ENSCGRG00001010527) Itpr1 (ENSCGRG00001019657) Bhlhe40 (ENSCGRG00001015526) Arl8b (ENSCGRG00001018115) Edem1 (ENSCGRG00001020705) ENSCGRG00001023368 Grm7 (ENSCGRG00001005305) ##22 Lmcd1 (ENSCGRG00001009463) Ssu2 (ENSCGRG00001012512) Cav3 (ENSCGRG00001014266) Oxtr (ENSCGRG00001014988) ENSCGRG00001015311 ENSCGRG00001018154 ENSCGRG00001021718 Srgap3 (ENSCGRG00001010935) Thumpd3 (ENSCGRG00001024117) Setd5 (ENSCGRG00001006430) Lhfpl4 (ENSCGRG00001014765) Mtmr14 (ENSCGRG00001016521) Cpne9 (ENSCGRG00001004481) Brpf1 (ENSCGRG00001013167) Ogg1 (ENSCGRG00001015167) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Prairie vole MODERN SPECIES 84 Cntn6 (ENSMOCG00000005399) Cntn4 (ENSMOCG00000013257) Il5ra (ENSMOCG00000015311) Trnt1 (ENSMOCG00000004539) Crbn (ENSMOCG00000019318) Lrrn1 (ENSMOCG00000001702) Setmar (ENSMOCG00000003026) Sumf1 (ENSMOCG00000014598) Itpr1 (ENSMOCG00000002247) Bhlhe40 (ENSMOCG00000014385) Arl8b (ENSMOCG00000018769) Edem1 (ENSMOCG00000020129) ENSMOCG00000009387 ENSMOCG00000016285 ENSMOCG00000020138 Grm7 (ENSMOCG00000016029) ##22 Lmcd1 (ENSMOCG00000013328) Ssu2 (ENSMOCG00000006487) Cav3 (ENSMOCG00000002186) OXTR (ENSMOCG00000002867) Rad18 (ENSMOCG00000009114) Srgap3 (ENSMOCG00000001918) Thumpd3 (ENSMOCG00000020148) Setd5 (ENSMOCG00000021198) Lhfpl4 (ENSMOCG00000002060) ENSMOCG00000010990 ENSMOCG00000018949 Cpne9 (ENSMOCG00000002818) Brpf1 (ENSMOCG00000018538) Ogg1 (ENSMOCG00000004855) Camk1 (ENSMOCG00000013180) Northern American deer mouse MODERN SPECIES 16 Cntn3 (ENSPEMG00000014200) Chl1 (ENSPEMG00000023675) Cntn6 (ENSPEMG00000019384) Cntn4 (ENSPEMG00000020085) Il5ra (ENSPEMG00000000193) Trnt1 (ENSPEMG00000019845) Crbn (ENSPEMG00000020177) Lrrn1 (ENSPEMG00000019903) Setmar (ENSPEMG00000023423) Sumf1 (ENSPEMG00000012549) Itpr1 (ENSPEMG00000018533) ENSPEMG00000025770 Bhlhe40 (ENSPEMG00000028508) Arl8b (ENSPEMG00000029131) Edem1 (ENSPEMG00000005304) Grm7 (ENSPEMG00000029693) ##22 Lmcd1 (ENSPEMG00000013048) Ssu2 (ENSPEMG00000022560) Cav3 (ENSPEMG00000029098) Oxtr (ENSPEMG00000027376) Rad18 (ENSPEMG00000022129) Srgap3 (ENSPEMG00000022268) Thumpd3 (ENSPEMG00000022411) Setd5 (ENSPEMG00000022422) Lhfpl4 (ENSPEMG00000009516) Mtmr14 (ENSPEMG00000007108) Cpne9 (ENSPEMG00000000816) Brpf1 (ENSPEMG00000015200) Ogg1 (ENSPEMG00000017476) Camk1 (ENSPEMG00000009642) Tada3 (ENSPEMG00000009947) Murinae ANCESTRAL SPECIES 4 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00960000189964 ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Rat MODERN SPECIES 14 ENSRNOG00000065903 AABR07061614.1 (ENSRNOG00000032820) Cntn6 (ENSRNOG00000032517) Cntn4 (ENSRNOG00000005652) Il5ra (ENSRNOG00000005954) Trnt1 (ENSRNOG00000006432) Crbn (ENSRNOG00000006534) Lrrn1 (ENSRNOG00000006802) Setmar (ENSRNOG00000006806) Sumf1 (ENSRNOG00000006813) Itpr1 (ENSRNOG00000007104) AABR07061707.1 (ENSRNOG00000052718) Bhlhe40 (ENSRNOG00000007152) Arl8b (ENSRNOG00000055860) Edem1 (ENSRNOG00000055365) Grm7 (ENSRNOG00000005662) ##22 LOC120102505 (ENSRNOG00000042804) ENSRNOG00000064122 Lmcd1 (ENSRNOG00000005690) Ssuh2 (ENSRNOG00000005734) Cav3 (ENSRNOG00000005798) Oxtr (ENSRNOG00000005806) Rad18 (ENSRNOG00000005907) Srgap3 (ENSRNOG00000006509) Thumpd3 (ENSRNOG00000006941) Setd5 (ENSRNOG00000007472) Lhfpl4 (ENSRNOG00000063676) Mtmr14 (ENSRNOG00000007881) Cpne9 (ENSRNOG00000023077) Brpf1 (ENSRNOG00000008142) Ogg1 (ENSRNOG00000052140) Mus ANCESTRAL SPECIES 12 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Mus_A ANCESTRAL SPECIES 7 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Mus_B ANCESTRAL SPECIES 15 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Mouse MODERN SPECIES 15 Pdzrn3 (ENSMUSG00000035357) Cntn3 (ENSMUSG00000030075) Chl1 (ENSMUSG00000030077) Cntn6 (ENSMUSG00000030092) Cntn4 (ENSMUSG00000064293) Il5ra (ENSMUSG00000005364) Trnt1 (ENSMUSG00000013736) Crbn (ENSMUSG00000005362) Lrrn1 (ENSMUSG00000034648) Setmar (ENSMUSG00000034639) Sumf1 (ENSMUSG00000030101) Itpr1 (ENSMUSG00000030102) Bhlhe40 (ENSMUSG00000030103) Arl8b (ENSMUSG00000030105) Edem1 (ENSMUSG00000030104) Grm7 (ENSMUSG00000056755) ##22 Lmcd1 (ENSMUSG00000057604) Ssu2 (ENSMUSG00000034387) Cav3 (ENSMUSG00000062694) Oxtr (ENSMUSG00000049112) Rad18 (ENSMUSG00000030254) Srgap3 (ENSMUSG00000030257) Thumpd3 (ENSMUSG00000030264) Setd5 (ENSMUSG00000034269) Lhfpl4 (ENSMUSG00000042873) Mtmr14 (ENSMUSG00000030269) Cpne9 (ENSMUSG00000030270) Brpf1 (ENSMUSG00000001632) Ogg1 (ENSMUSG00000030271) Camk1 (ENSMUSG00000030272) Tada3 (ENSMUSG00000048930) Mus_C ANCESTRAL SPECIES 18 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 spretus MODERN SPECIES 15 Pdzrn3 (MGP_SPRETEiJ_G0029720) Cntn3 (MGP_SPRETEiJ_G0029721) Chl1 (MGP_SPRETEiJ_G0029722) Cntn6 (MGP_SPRETEiJ_G0029723) Cntn4 (MGP_SPRETEiJ_G0029724) Il5ra (MGP_SPRETEiJ_G0029725) Trnt1 (MGP_SPRETEiJ_G0029726) Crbn (MGP_SPRETEiJ_G0029727) Lrrn1 (MGP_SPRETEiJ_G0029728) Setmar (MGP_SPRETEiJ_G0029729) Sumf1 (MGP_SPRETEiJ_G0029730) Itpr1 (MGP_SPRETEiJ_G0029731) Bhlhe40 (MGP_SPRETEiJ_G0029732) Arl8b (MGP_SPRETEiJ_G0029733) Edem1 (MGP_SPRETEiJ_G0029734) Grm7 (MGP_SPRETEiJ_G0029735) ##22 Lmcd1 (MGP_SPRETEiJ_G0029736) Ssu2 (MGP_SPRETEiJ_G0029737) Cav3 (MGP_SPRETEiJ_G0029738) Oxtr (MGP_SPRETEiJ_G0029739) Rad18 (MGP_SPRETEiJ_G0029740) Srgap3 (MGP_SPRETEiJ_G0029741) Thumpd3 (MGP_SPRETEiJ_G0029742) Setd5 (MGP_SPRETEiJ_G0029743) Lhfpl4 (MGP_SPRETEiJ_G0029744) Mtmr14 (MGP_SPRETEiJ_G0029745) Cpne9 (MGP_SPRETEiJ_G0029746) Brpf1 (MGP_SPRETEiJ_G0029747) Ogg1 (MGP_SPRETEiJ_G0029748) Camk1 (MGP_SPRETEiJ_G0029749) Tada3 (MGP_SPRETEiJ_G0029750) Steppe mouse MODERN SPECIES 3071 Grm7 (ENSMSIG00000005295) ##22 Ryukyu mouse MODERN SPECIES 15 Pdzrn3 (MGP_CAROLIEiJ_G0028692) Cntn3 (MGP_CAROLIEiJ_G0028693) Chl1 (MGP_CAROLIEiJ_G0028694) Cntn6 (MGP_CAROLIEiJ_G0028695) Cntn4 (MGP_CAROLIEiJ_G0028696) Il5ra (MGP_CAROLIEiJ_G0028697) Trnt1 (MGP_CAROLIEiJ_G0028698) Crbn (MGP_CAROLIEiJ_G0028699) Lrrn1 (MGP_CAROLIEiJ_G0028700) Setmar (MGP_CAROLIEiJ_G0028701) Sumf1 (MGP_CAROLIEiJ_G0028702) Itpr1 (MGP_CAROLIEiJ_G0028703) Bhlhe40 (MGP_CAROLIEiJ_G0028704) Arl8b (MGP_CAROLIEiJ_G0028705) Edem1 (MGP_CAROLIEiJ_G0028706) Grm7 (MGP_CAROLIEiJ_G0028707) ##22 Lmcd1 (MGP_CAROLIEiJ_G0028708) Ssu2 (MGP_CAROLIEiJ_G0028709) Cav3 (MGP_CAROLIEiJ_G0028710) Oxtr (MGP_CAROLIEiJ_G0028711) Rad18 (MGP_CAROLIEiJ_G0028712) Srgap3 (MGP_CAROLIEiJ_G0028713) MGP_CAROLIEiJ_G0028714 Setd5 (MGP_CAROLIEiJ_G0028715) Lhfpl4 (MGP_CAROLIEiJ_G0028716) Mtmr14 (MGP_CAROLIEiJ_G0028717) Cpne9 (MGP_CAROLIEiJ_G0028718) Brpf1 (MGP_CAROLIEiJ_G0028719) Ogg1 (MGP_CAROLIEiJ_G0028720) Camk1 (MGP_CAROLIEiJ_G0028721) Tada3 (MGP_CAROLIEiJ_G0028722) Shrew mouse MODERN SPECIES 11 Pdzrn3 (MGP_PahariEiJ_G0022443) Cntn3 (MGP_PahariEiJ_G0022444) Chl1 (MGP_PahariEiJ_G0022445) Cntn6 (MGP_PahariEiJ_G0022446) MGP_PahariEiJ_G0022447 Il5ra (MGP_PahariEiJ_G0022448) Trnt1 (MGP_PahariEiJ_G0022449) Crbn (MGP_PahariEiJ_G0022450) Lrrn1 (MGP_PahariEiJ_G0022451) Setmar (MGP_PahariEiJ_G0022452) Sumf1 (MGP_PahariEiJ_G0022453) Itpr1 (MGP_PahariEiJ_G0022454) Bhlhe40 (MGP_PahariEiJ_G0022455) Arl8b (MGP_PahariEiJ_G0022456) Edem1 (MGP_PahariEiJ_G0022457) Grm7 (MGP_PahariEiJ_G0022458) ##22 Lmcd1 (MGP_PahariEiJ_G0022459) Ssu2 (MGP_PahariEiJ_G0022460) Cav3 (MGP_PahariEiJ_G0022461) Oxtr (MGP_PahariEiJ_G0022462) Rad18 (MGP_PahariEiJ_G0022463) Srgap3 (MGP_PahariEiJ_G0022464) Thumpd3 (MGP_PahariEiJ_G0022465) Setd5 (MGP_PahariEiJ_G0022466) Lhfpl4 (MGP_PahariEiJ_G0022467) Mtmr14 (MGP_PahariEiJ_G0022468) Cpne9 (MGP_PahariEiJ_G0022469) Brpf1 (MGP_PahariEiJ_G0022470) Ogg1 (MGP_PahariEiJ_G0022471) Camk1 (MGP_PahariEiJ_G0022472) Tada3 (MGP_PahariEiJ_G0022473) Rodentia_A ANCESTRAL SPECIES 27 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Sciuridae ANCESTRAL SPECIES 41 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Eurasian red squirrel MODERN SPECIES 10 IL5RA (ENSSVLG00005025823) TRNT1 (ENSSVLG00005025808) CRBN (ENSSVLG00005025805) ENSSVLG00005025803 LRRN1 (ENSSVLG00005025801) ENSSVLG00005025798 SUMF1 (ENSSVLG00005025792) ITPR1 (ENSSVLG00005025774) BHLHE40 (ENSSVLG00005025741) ENSSVLG00005025728 ARL8B (ENSSVLG00005025718) EDEM1 (ENSSVLG00005025704) ENSSVLG00005025696 ENSSVLG00005025690 ENSSVLG00005025685 GRM7 (ENSSVLG00005025662) ##22 LMCD1 (ENSSVLG00005025633) SSUH2 (ENSSVLG00005025613) CAV3 (ENSSVLG00005025604) OXTR (ENSSVLG00005025596) RAD18 (ENSSVLG00005025578) SRGAP3 (ENSSVLG00005025521) THUMPD3 (ENSSVLG00005025481) SETD5 (ENSSVLG00005025433) LHFPL4 (ENSSVLG00005025392) MTMR14 (ENSSVLG00005025326) CPNE9 (ENSSVLG00005025235) BRPF1 (ENSSVLG00005025105) OGG1 (ENSSVLG00005025032) CAMK1 (ENSSVLG00005024976) TADA3 (ENSSVLG00005024948) Marmotini ANCESTRAL SPECIES 49 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Alpin marmot MODERN SPECIES 40 PDZRN3 (ENSMMMG00000006989) CNTN3 (ENSMMMG00000007027) CHL1 (ENSMMMG00000007097) CNTN6 (ENSMMMG00000007205) CNTN4 (ENSMMMG00000007297) IL5RA (ENSMMMG00000007442) TRNT1 (ENSMMMG00000007463) CRBN (ENSMMMG00000007485) LRRN1 (ENSMMMG00000007534) ENSMMMG00000007561 SUMF1 (ENSMMMG00000007589) ITPR1 (ENSMMMG00000007640) BHLHE40 (ENSMMMG00000007823) ARL8B (ENSMMMG00000007850) EDEM1 (ENSMMMG00000007881) GRM7 (ENSMMMG00000008319) ##22 LMCD1 (ENSMMMG00000008370) SSUH2 (ENSMMMG00000008390) CAV3 (ENSMMMG00000008414) OXTR (ENSMMMG00000008417) RAD18 (ENSMMMG00000008426) SRGAP3 (ENSMMMG00000008489) THUMPD3 (ENSMMMG00000008539) SETD5 (ENSMMMG00000008559) LHFPL4 (ENSMMMG00000008628) ENSMMMG00000008637 CPNE9 (ENSMMMG00000008660) BRPF1 (ENSMMMG00000008752) OGG1 (ENSMMMG00000008989) CAMK1 (ENSMMMG00000008993) TADA3 (ENSMMMG00000009015) Marmotini_b ANCESTRAL SPECIES 62 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Arctic ground squirrel MODERN SPECIES 23 CNTN4 (ENSUPAG00010022747) IL5RA (ENSUPAG00010022771) TRNT1 (ENSUPAG00010022775) CRBN (ENSUPAG00010022777) LRRN1 (ENSUPAG00010022779) ENSUPAG00010022780 SUMF1 (ENSUPAG00010022782) ITPR1 (ENSUPAG00010022789) BHLHE40 (ENSUPAG00010022838) ARL8B (ENSUPAG00010022842) EDEM1 (ENSUPAG00010022843) GRM7 (ENSUPAG00010022847) ##22 ENSUPAG00010022848 LMCD1 (ENSUPAG00010022849) SSUH2 (ENSUPAG00010022850) CAV3 (ENSUPAG00010022852) OXTR (ENSUPAG00010022853) RAD18 (ENSUPAG00010022854) SRGAP3 (ENSUPAG00010022863) THUMPD3 (ENSUPAG00010022869) SETD5 (ENSUPAG00010022873) LHFPL4 (ENSUPAG00010022879) MTMR14 (ENSUPAG00010022881) CPNE9 (ENSUPAG00010022882) BRPF1 (ENSUPAG00010022889) CAMK1 (ENSUPAG00010022925) TADA3 (ENSUPAG00010022928) Squirrel DUPLICATION Squirrel MODERN SPECIES 202 GRM7 (ENSSTOG00000012823) ##22 ENSSTOG00000029032 LMCD1 (ENSSTOG00000013558) SSUH2 (ENSSTOG00000013310) CAV3 (ENSSTOG00000013328) OXTR (ENSSTOG00000013332) RAD18 (ENSSTOG00000004870) SRGAP3 (ENSSTOG00000004891) THUMPD3 (ENSSTOG00000003973) SETD5 (ENSSTOG00000002023) LHFPL4 (ENSSTOG00000021198) MTMR14 (ENSSTOG00000002048) CPNE9 (ENSSTOG00000002061) BRPF1 (ENSSTOG00000002078) OGG1 (ENSSTOG00000002087) CAMK1 (ENSSTOG00000002094) Squirrel MODERN SPECIES 177 CHL1 (ENSSTOG00000003470) CNTN6 (ENSSTOG00000010495) CNTN4 (ENSSTOG00000000147) IL5RA (ENSSTOG00000007367) TRNT1 (ENSSTOG00000000150) CRBN (ENSSTOG00000028102) LRRN1 (ENSSTOG00000020406) ENSSTOG00000025520 SUMF1 (ENSSTOG00000022603) ITPR1 (ENSSTOG00000012015) BHLHE40 (ENSSTOG00000000793) ARL8B (ENSSTOG00000009294) EDEM1 (ENSSTOG00000009304) ENSSTOG00000024514 ##22 Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000033324 ENSHGLG00000048183 ENSHGLG00000042322 ENSHGLG00000039470 ENSHGLG00000002002 ENSHGLG00000001846 ENSHGLG00000002073 ENSHGLG00000050895 ENSHGLG00000044283 ENSHGLG00000042623 ENSHGLG00000046070 ENSHGLG00000040264 ENSHGLG00000002591 ENSHGLG00000032624 ENSHGLG00000041435 ENSHGLG00000007102 ##22 ENSHGLG00000008410 ENSHGLG00000009436 ENSHGLG00000010813 DLEC1 (ENSHGLG00000011950) PLCD1 (ENSHGLG00000019434) VILL (ENSHGLG00000034627) ENSHGLG00000007859 ITGA9 (ENSHGLG00000008865) ENSHGLG00000041383 ENSHGLG00000045409 ENSHGLG00000003324 MLH1 (ENSHGLG00000002978) EPM2AIP1 (ENSHGLG00000038650) TRANK1 (ENSHGLG00000002458) DCLK3 (ENSHGLG00000002384) Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b Guinea pig DUPLICATION Guinea pig MODERN SPECIES 16 CHL1 (ENSCPOG00000014986) CNTN6 (ENSCPOG00000001124) CNTN4 (ENSCPOG00000026863) Il5ra (ENSCPOG00000007845) TRNT1 (ENSCPOG00000007849) CRBN (ENSCPOG00000007851) LRRN1 (ENSCPOG00000006583) ENSCPOG00000019854 SUMF1 (ENSCPOG00000014854) ITPR1 (ENSCPOG00000005053) BHLHE40 (ENSCPOG00000004014) ENSCPOG00000002434 ENSCPOG00000020709 ARL8B (ENSCPOG00000031098) EDEM1 (ENSCPOG00000031536) GRM7 (ENSCPOG00000001886) ##22 DLEC1 (ENSCPOG00000008859) PLCD1 (ENSCPOG00000000596) VILL (ENSCPOG00000029985) CTDSPL (ENSCPOG00000000592) ITGA9 (ENSCPOG00000014650) GOLGA4 (ENSCPOG00000008525) LRRFIP2 (ENSCPOG00000038703) MLH1 (ENSCPOG00000003928) EPM2AIP1 (ENSCPOG00000022371) TRANK1 (ENSCPOG00000013754) DCLK3 (ENSCPOG00000002280) STAC (ENSCPOG00000031088) ARPP21 (ENSCPOG00000008780) ENSCPOG00000003230 CLASP2 (ENSCPOG00000015184) Guinea pig MODERN SPECIES 11 GARIN1A (ENSCPOG00000020934) #8 ENSCPOG00000037525 HILPDA (ENSCPOG00000037851) IMPDH1 (ENSCPOG00000006264) #9 PRRT4 (ENSCPOG00000040639) #10 RBM28 (ENSCPOG00000006253) #11 LEP (ENSCPOG00000034742) #13 LRRC4 (ENSCPOG00000032605) #15 SND1 (ENSCPOG00000006251) #14 PAX4 (ENSCPOG00000006244) #16 FSCN3 (ENSCPOG00000005661) #17 ARF5 (ENSCPOG00000006239) #18 GCC1 (ENSCPOG00000038340) #19 ZNF800 (ENSCPOG00000007495) #20 ENSCPOG00000024031 #22 ENSCPOG00000036366 ##22 POT1 (ENSCPOG00000014166) #24 GPR37 (ENSCPOG00000014159) #26 TMEM229A (ENSCPOG00000039455) SPAM1 (ENSCPOG00000001716) #27 HYAL4 (ENSCPOG00000013594) #28 ENSCPOG00000027329 ##28 WASL (ENSCPOG00000003284) #29 LMOD2 (ENSCPOG00000034650) #30 ASB15 (ENSCPOG00000025748) #31 NDUFA5 (ENSCPOG00000030629) #32 IQUB (ENSCPOG00000006286) #34 SLC13A1 (ENSCPOG00000006440) #35 TAS2R16 (ENSCPOG00000007419) RNF133 (ENSCPOG00000035136) CADPS2 (ENSCPOG00000005875) #36 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b Long-tailed chinchilla MODERN SPECIES 128 PDZRN3 (ENSCLAG00000010964) CNTN3 (ENSCLAG00000009614) CHL1 (ENSCLAG00000006459) CNTN6 (ENSCLAG00000008602) CNTN4 (ENSCLAG00000006463) IL5RA (ENSCLAG00000005656) TRNT1 (ENSCLAG00000005186) CRBN (ENSCLAG00000004930) LRRN1 (ENSCLAG00000004896) ENSCLAG00000005640 SUMF1 (ENSCLAG00000004509) ITPR1 (ENSCLAG00000009445) BHLHE40 (ENSCLAG00000003841) ARL8B (ENSCLAG00000003184) EDEM1 (ENSCLAG00000004922) GRM7 (ENSCLAG00000004216) ##22 ENSCLAG00000003666 SLC22A14 (ENSCLAG00000003320) ENSCLAG00000003124 DLEC1 (ENSCLAG00000006229) PLCD1 (ENSCLAG00000005079) VILL (ENSCLAG00000005376) CTDSPL (ENSCLAG00000004547) ITGA9 (ENSCLAG00000004058) GOLGA4 (ENSCLAG00000005913) LRRFIP2 (ENSCLAG00000003180) MLH1 (ENSCLAG00000004334) EPM2AIP1 (ENSCLAG00000017557) ENSCLAG00000004029 TRANK1 (ENSCLAG00000003643) DCLK3 (ENSCLAG00000005385) Degu MODERN SPECIES 112 GRM7 (ENSODEG00000004081) ##22 ENSODEG00000004146 ENSODEG00000004195 SLC22A14 (ENSODEG00000004224) ENSODEG00000004410 DLEC1 (ENSODEG00000004527) PLCD1 (ENSODEG00000004716) ENSODEG00000004890 CTDSPL (ENSODEG00000005636) ITGA9 (ENSODEG00000005754) GOLGA4 (ENSODEG00000005969) ENSODEG00000019234 ENSODEG00000006044 MLH1 (ENSODEG00000006098) EPM2AIP1 (ENSODEG00000019311) TRANK1 (ENSODEG00000003882) Lagomorpha ANCESTRAL SPECIES 169 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b Pika MODERN SPECIES 4304 GRM7 (ENSOPRG00000002111) ##22 Rabbit DUPLICATION Rabbit MODERN SPECIES 436 CNTN6 (ENSOCUG00000012763) CNTN4 (ENSOCUG00000011025) ENSOCUG00000015601 TRNT1 (ENSOCUG00000008580) CRBN (ENSOCUG00000025795) LRRN1 (ENSOCUG00000023697) ENSOCUG00000036915 ENSOCUG00000036153 ENSOCUG00000026652 SUMF1 (ENSOCUG00000012348) ITPR1 (ENSOCUG00000012148) ENSOCUG00000015177 ENSOCUG00000014090 EDEM1 (ENSOCUG00000014098) ENSOCUG00000039475 ##22 GRM7 (ENSOCUG00000017426) ##22 ENSOCUG00000024911 LMCD1 (ENSOCUG00000010136) SSUH2 (ENSOCUG00000014613) CAV3 (ENSOCUG00000005950) RAD18 (ENSOCUG00000000013) Rabbit MODERN SPECIES 436 ENSOCUG00000037666 CNTN6 (ENSOCUG00000012763) CNTN4 (ENSOCUG00000011025) ENSOCUG00000015601 TRNT1 (ENSOCUG00000008580) CRBN (ENSOCUG00000025795) LRRN1 (ENSOCUG00000023697) ENSOCUG00000036915 ENSOCUG00000036153 ENSOCUG00000026652 SUMF1 (ENSOCUG00000012348) ITPR1 (ENSOCUG00000012148) ENSOCUG00000015177 ENSOCUG00000014090 EDEM1 (ENSOCUG00000014098) ENSOCUG00000039475 ##22 GRM7 (ENSOCUG00000017426) ##22 ENSOCUG00000024911 LMCD1 (ENSOCUG00000010136) SSUH2 (ENSOCUG00000014613) CAV3 (ENSOCUG00000005950) RAD18 (ENSOCUG00000000013) Primates ANCESTRAL SPECIES 1 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000160975 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000169558 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 Gibbon DUPLICATION Gibbon MODERN SPECIES 13 ENSNLEG00000034611 CNTN4 (ENSNLEG00000003113) IL5RA (ENSNLEG00000003193) TRNT1 (ENSNLEG00000003226) CRBN (ENSNLEG00000003256) LRRN1 (ENSNLEG00000003325) ENSNLEG00000003327 SETMAR (ENSNLEG00000003331) SUMF1 (ENSNLEG00000003334) ITPR1 (ENSNLEG00000003382) ENSNLEG00000003704 ARL8B (ENSNLEG00000034641) EDEM1 (ENSNLEG00000003738) ENSNLEG00000036159 ENSNLEG00000032377 ##22 ENSNLEG00000003761 ##22 ENSNLEG00000034183 LMCD1 (ENSNLEG00000003766) SSUH2 (ENSNLEG00000003778) CAV3 (ENSNLEG00000003781) OXTR (ENSNLEG00000029699) ENSNLEG00000029940 RAD18 (ENSNLEG00000003789) SRGAP3 (ENSNLEG00000003842) ENSNLEG00000018950 THUMPD3 (ENSNLEG00000003863) SETD5 (ENSNLEG00000003896) LHFPL4 (ENSNLEG00000029860) ENSNLEG00000035746 MTMR14 (ENSNLEG00000003963) CPNE9 (ENSNLEG00000004055) Gibbon MODERN SPECIES 13 ENSNLEG00000029240 ENSNLEG00000034611 CNTN4 (ENSNLEG00000003113) IL5RA (ENSNLEG00000003193) TRNT1 (ENSNLEG00000003226) CRBN (ENSNLEG00000003256) LRRN1 (ENSNLEG00000003325) ENSNLEG00000003327 SETMAR (ENSNLEG00000003331) SUMF1 (ENSNLEG00000003334) ITPR1 (ENSNLEG00000003382) ENSNLEG00000003704 ARL8B (ENSNLEG00000034641) EDEM1 (ENSNLEG00000003738) ENSNLEG00000036159 ENSNLEG00000032377 ##22 ENSNLEG00000003761 ##22 ENSNLEG00000034183 LMCD1 (ENSNLEG00000003766) SSUH2 (ENSNLEG00000003778) CAV3 (ENSNLEG00000003781) OXTR (ENSNLEG00000029699) ENSNLEG00000029940 RAD18 (ENSNLEG00000003789) SRGAP3 (ENSNLEG00000003842) ENSNLEG00000018950 THUMPD3 (ENSNLEG00000003863) SETD5 (ENSNLEG00000003896) LHFPL4 (ENSNLEG00000029860) ENSNLEG00000035746 MTMR14 (ENSNLEG00000003963) Hominidae ANCESTRAL SPECIES 2 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 Orangutan MODERN SPECIES 16 ENSPPYG00000013708 CNTN6 (ENSPPYG00000013706) ENSPPYG00000033051 CNTN4 (ENSPPYG00000013704) IL5RA (ENSPPYG00000013703) TRNT1 (ENSPPYG00000013702) CRBN (ENSPPYG00000013701) LRRN1 (ENSPPYG00000013700) SETMAR (ENSPPYG00000038930) SUMF1 (ENSPPYG00000013698) ITPR1 (ENSPPYG00000013697) BHLHE40 (ENSPPYG00000013696) ENSPPYG00000037656 ARL8B (ENSPPYG00000013694) EDEM1 (ENSPPYG00000013692) GRM7 (ENSPPYG00000013691) ##22 LMCD1 (ENSPPYG00000029530) SSUH2 (ENSPPYG00000034055) ENSPPYG00000032602 OXTR (ENSPPYG00000013689) RAD18 (ENSPPYG00000013688) SRGAP3 (ENSPPYG00000013687) THUMPD3 (ENSPPYG00000029461) ENSPPYG00000039709 SETD5 (ENSPPYG00000013685) LHFPL4 (ENSPPYG00000031280) MTMR14 (ENSPPYG00000013683) CPNE9 (ENSPPYG00000036270) BRPF1 (ENSPPYG00000013682) CAMK1 (ENSPPYG00000013680) ENSPPYG00000013681 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT00390000017443.q ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 Gorilla MODERN SPECIES 16 ENSGGOG00000023041 CNTN4 (ENSGGOG00000001075) IL5RA (ENSGGOG00000001078) TRNT1 (ENSGGOG00000015286) CRBN (ENSGGOG00000008850) LRRN1 (ENSGGOG00000022843) ENSGGOG00000041496 SETMAR (ENSGGOG00000004932) SUMF1 (ENSGGOG00000015942) ITPR1 (ENSGGOG00000005486) BHLHE40 (ENSGGOG00000015864) ARL8B (ENSGGOG00000004952) EDEM1 (ENSGGOG00000002037) ENSGGOG00000041394 ENSGGOG00000026240 GRM7 (ENSGGOG00000034996) ##22 ENSGGOG00000036793 LMCD1 (ENSGGOG00000013915) SSUH2 (ENSGGOG00000025443) CAV3 (ENSGGOG00000000136) OXTR (ENSGGOG00000011995) ENSGGOG00000037974 RAD18 (ENSGGOG00000008391) SRGAP3 (ENSGGOG00000011175) THUMPD3 (ENSGGOG00000000604) SETD5 (ENSGGOG00000004026) LHFPL4 (ENSGGOG00000039691) MTMR14 (ENSGGOG00000003531) ENSGGOG00000041533 CPNE9 (ENSGGOG00000014229) BRPF1 (ENSGGOG00000014249) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT00390000017443.q ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 Human MODERN SPECIES 15 CHL1 (ENSG00000134121) CNTN6 (ENSG00000134115) CNTN4 (ENSG00000144619) IL5RA (ENSG00000091181) TRNT1 (ENSG00000072756) CRBN (ENSG00000113851) SUMF1 (ENSG00000144455) LRRN1 (ENSG00000175928) SETMAR (ENSG00000170364) ITPR1 (ENSG00000150995) BHLHE40 (ENSG00000134107) ARL8B (ENSG00000134108) EDEM1 (ENSG00000134109) GRM7 (ENSG00000196277) ##22 LMCD1 (ENSG00000071282) SSUH2 (ENSG00000125046) CAV3 (ENSG00000182533) OXTR (ENSG00000180914) RAD18 (ENSG00000070950) SRGAP3 (ENSG00000196220) THUMPD3 (ENSG00000134077) SETD5 (ENSG00000168137) LHFPL4 (ENSG00000156959) MTMR14 (ENSG00000163719) CPNE9 (ENSG00000144550) BRPF1 (ENSG00000156983) OGG1 (ENSG00000114026) CAMK1 (ENSG00000134072) TADA3 (ENSG00000171148) Pan ANCESTRAL SPECIES 2 ENSGT00860000135570.a.a.d ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT00390000017443.q ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00950000182967.a.a.a.a.a.a.o.a.a.a.b.a ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 Bonobo MODERN SPECIES 16 ENSPPAG00000036787 ENSPPAG00000029596 CNTN6 (ENSPPAG00000030653) CNTN4 (ENSPPAG00000030378) IL5RA (ENSPPAG00000043636) TRNT1 (ENSPPAG00000043566) CRBN (ENSPPAG00000043835) LRRN1 (ENSPPAG00000019340) ENSPPAG00000040514 SETMAR (ENSPPAG00000039860) SUMF1 (ENSPPAG00000031782) ITPR1 (ENSPPAG00000040602) BHLHE40 (ENSPPAG00000033029) ARL8B (ENSPPAG00000043156) EDEM1 (ENSPPAG00000028465) GRM7 (ENSPPAG00000031004) ##22 ENSPPAG00000041288 ENSPPAG00000034040 SSUH2 (ENSPPAG00000034342) CAV3 (ENSPPAG00000041648) ENSPPAG00000028316 RAD18 (ENSPPAG00000035797) SRGAP3 (ENSPPAG00000038210) THUMPD3 (ENSPPAG00000025852) SETD5 (ENSPPAG00000040908) LHFPL4 (ENSPPAG00000041973) ENSPPAG00000003279 MTMR14 (ENSPPAG00000042894) ENSPPAG00000031881 CPNE9 (ENSPPAG00000039535) BRPF1 (ENSPPAG00000018806) Chimpanzee MODERN SPECIES 16 ENSPTRG00000047628 CNTN6 (ENSPTRG00000014560) CNTN4 (ENSPTRG00000014562) IL5RA (ENSPTRG00000014563) TRNT1 (ENSPTRG00000014564) CRBN (ENSPTRG00000014565) LRRN1 (ENSPTRG00000014566) ENSPTRG00000051411 SETMAR (ENSPTRG00000047540) SUMF1 (ENSPTRG00000014568) ITPR1 (ENSPTRG00000014570) BHLHE40 (ENSPTRG00000014571) ARL8B (ENSPTRG00000014572) EDEM1 (ENSPTRG00000014573) ENSPTRG00000043253 GRM7 (ENSPTRG00000014576) ##22 LMCD1 (ENSPTRG00000014579) SSUH2 (ENSPTRG00000014580) CAV3 (ENSPTRG00000014581) OXTR (ENSPTRG00000014582) ENSPTRG00000044052 RAD18 (ENSPTRG00000014583) SRGAP3 (ENSPTRG00000023245) THUMPD3 (ENSPTRG00000014585) SETD5 (ENSPTRG00000014586) LHFPL4 (ENSPTRG00000014587) ENSPTRG00000042180 MTMR14 (ENSPTRG00000023231) ENSPTRG00000051815 CPNE9 (ENSPTRG00000014591) BRPF1 (ENSPTRG00000014592) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 Vervet Monkey MODERN SPECIES 14 CNTN3 (ENSCSAG00000011366) CHL1 (ENSCSAG00000011267) CNTN6 (ENSCSAG00000011221) CNTN4 (ENSCSAG00000011111) IL5RA (ENSCSAG00000011082) TRNT1 (ENSCSAG00000011052) CRBN (ENSCSAG00000011049) LRRN1 (ENSCSAG00000018805) SETMAR (ENSCSAG00000011036) SUMF1 (ENSCSAG00000011018) ITPR1 (ENSCSAG00000010951) BHLHE40 (ENSCSAG00000010905) ARL8B (ENSCSAG00000010899) EDEM1 (ENSCSAG00000010870) ENSCSAG00000018808 GRM7 (ENSCSAG00000010821) ##22 LMCD1 (ENSCSAG00000010812) SSUH2 (ENSCSAG00000010807) CAV3 (ENSCSAG00000010794) OXTR (ENSCSAG00000010788) RAD18 (ENSCSAG00000010783) SRGAP3 (ENSCSAG00000010768) THUMPD3 (ENSCSAG00000010753) SETD5 (ENSCSAG00000010734) LHFPL4 (ENSCSAG00000010717) MTMR14 (ENSCSAG00000010706) CPNE9 (ENSCSAG00000010693) BRPF1 (ENSCSAG00000010677) OGG1 (ENSCSAG00000010646) CAMK1 (ENSCSAG00000010585) TADA3 (ENSCSAG00000010578) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 Sooty mangabey MODERN SPECIES 650 CNTN3 (ENSCATG00000034171) CHL1 (ENSCATG00000029263) CNTN6 (ENSCATG00000010690) CNTN4 (ENSCATG00000013943) IL5RA (ENSCATG00000034457) TRNT1 (ENSCATG00000031985) CRBN (ENSCATG00000031208) LRRN1 (ENSCATG00000022421) ENSCATG00000036442 SETMAR (ENSCATG00000030348) SUMF1 (ENSCATG00000041356) ITPR1 (ENSCATG00000041137) BHLHE40 (ENSCATG00000041297) ARL8B (ENSCATG00000039869) EDEM1 (ENSCATG00000042340) GRM7 (ENSCATG00000039394) ##22 ENSCATG00000022769 LMCD1 (ENSCATG00000021322) SSUH2 (ENSCATG00000015257) CAV3 (ENSCATG00000033700) OXTR (ENSCATG00000041051) ENSCATG00000022222 RAD18 (ENSCATG00000039277) SRGAP3 (ENSCATG00000039630) THUMPD3 (ENSCATG00000040999) SETD5 (ENSCATG00000039007) ENSCATG00000002330 LHFPL4 (ENSCATG00000042929) ENSCATG00000043717 MTMR14 (ENSCATG00000044467) CPNE9 (ENSCATG00000044635) Drill MODERN SPECIES 1357 GRM7 (ENSMLEG00000043857) ##22 LMCD1 (ENSMLEG00000030862) SSUH2 (ENSMLEG00000012350) CAV3 (ENSMLEG00000034423) OXTR (ENSMLEG00000000821) ENSMLEG00000032743 RAD18 (ENSMLEG00000014306) SRGAP3 (ENSMLEG00000013856) Olive baboon MODERN SPECIES 11 CNTN6 (ENSPANG00000010252) ENSPANG00000041415 ENSPANG00000011250 IL5RA (ENSPANG00000011489) TRNT1 (ENSPANG00000025944) CRBN (ENSPANG00000007745) LRRN1 (ENSPANG00000007804) ENSPANG00000043434 SETMAR (ENSPANG00000005127) SUMF1 (ENSPANG00000023714) ITPR1 (ENSPANG00000016086) ENSPANG00000045181 ENSPANG00000039685 ARL8B (ENSPANG00000009815) EDEM1 (ENSPANG00000016993) GRM7 (ENSPANG00000005212) ##22 LMCD1 (ENSPANG00000001206) SSUH2 (ENSPANG00000009185) CAV3 (ENSPANG00000046040) OXTR (ENSPANG00000005977) RAD18 (ENSPANG00000008855) SRGAP3 (ENSPANG00000008856) THUMPD3 (ENSPANG00000016253) SETD5 (ENSPANG00000005213) LHFPL4 (ENSPANG00000032875) MTMR14 (ENSPANG00000023051) CPNE9 (ENSPANG00000004587) BRPF1 (ENSPANG00000006489) CAMK1 (ENSPANG00000000429) TADA3 (ENSPANG00000021587) OGG1 (ENSPANG00000018759) Macaca ANCESTRAL SPECIES 5 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00390000014001.b ENSGT00440000033232.c.f ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 Pig-tailed macaque MODERN SPECIES 546 CNTN4 (ENSMNEG00000044169) IL5RA (ENSMNEG00000043242) TRNT1 (ENSMNEG00000037805) CRBN (ENSMNEG00000044270) LRRN1 (ENSMNEG00000021728) ENSMNEG00000013018 SETMAR (ENSMNEG00000045183) SUMF1 (ENSMNEG00000003566) ITPR1 (ENSMNEG00000034253) BHLHE40 (ENSMNEG00000038264) ARL8B (ENSMNEG00000029717) EDEM1 (ENSMNEG00000034041) ENSMNEG00000021998 GRM7 (ENSMNEG00000031784) ##22 LMCD1 (ENSMNEG00000039664) SSUH2 (ENSMNEG00000032764) CAV3 (ENSMNEG00000045110) OXTR (ENSMNEG00000037475) ENSMNEG00000027815 RAD18 (ENSMNEG00000013464) SRGAP3 (ENSMNEG00000028942) ENSMNEG00000032308 THUMPD3 (ENSMNEG00000030529) SETD5 (ENSMNEG00000045236) ENSMNEG00000026054 LHFPL4 (ENSMNEG00000032394) MTMR14 (ENSMNEG00000036145) CPNE9 (ENSMNEG00000032338) BRPF1 (ENSMNEG00000028158) Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00440000033232.c.f ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01100000263493.a.a.a.b.a.a.a.a.a.a.b.b ENSGT01030000236289.b ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 Rhesus MODERN SPECIES 11 ENSMMUG00000056158 CNTN4 (ENSMMUG00000001847) IL5RA (ENSMMUG00000001849) TRNT1 (ENSMMUG00000017983) CRBN (ENSMMUG00000017986) LRRN1 (ENSMMUG00000049373) SETMAR (ENSMMUG00000017828) SUMF1 (ENSMMUG00000004734) ITPR1 (ENSMMUG00000012574) BHLHE40 (ENSMMUG00000056699) ARL8B (ENSMMUG00000008810) EDEM1 (ENSMMUG00000065088) ENSMMUG00000065004 ENSMMUG00000057502 ENSMMUG00000031947 GRM7 (ENSMMUG00000011231) ##22 ENSMMUG00000062010 LMCD1 (ENSMMUG00000001814) SSUH2 (ENSMMUG00000009699) CAV3 (ENSMMUG00000053020) OXTR (ENSMMUG00000009703) ENSMMUG00000060249 RAD18 (ENSMMUG00000020013) SRGAP3 (ENSMMUG00000020014) THUMPD3 (ENSMMUG00000017307) SETD5 (ENSMMUG00000003943) ENSMMUG00000055011 LHFPL4 (ENSMMUG00000063958) MTMR14 (ENSMMUG00000007808) CPNE9 (ENSMMUG00000006115) BRPF1 (ENSMMUG00000006116) Crab-eating macaque MODERN SPECIES 11 IL5RA (ENSMFAG00000006030) TRNT1 (ENSMFAG00000045113) CRBN (ENSMFAG00000031028) LRRN1 (ENSMFAG00000020302) ENSMFAG00000029288 SUMF1 (ENSMFAG00000040853) ITPR1 (ENSMFAG00000044748) BHLHE40 (ENSMFAG00000040134) ARL8B (ENSMFAG00000035233) EDEM1 (ENSMFAG00000038359) ENSMFAG00000061059 ENSMFAG00000048887 ENSMFAG00000063438 ENSMFAG00000047622 ENSMFAG00000029998 GRM7 (ENSMFAG00000027785) ##22 LMCD1 (ENSMFAG00000033976) SSUH2 (ENSMFAG00000035455) CAV3 (ENSMFAG00000037376) OXTR (ENSMFAG00000037530) ENSMFAG00000030087 RAD18 (ENSMFAG00000028864) ENSMFAG00000033455 THUMPD3 (ENSMFAG00000044884) LHFPL4 (ENSMFAG00000033316) MTMR14 (ENSMFAG00000038577) CPNE9 (ENSMFAG00000035676) BRPF1 (ENSMFAG00000045669) OGG1 (ENSMFAG00000041077) CAMK1 (ENSMFAG00000040953) TADA3 (ENSMFAG00000044750) Rhinopithecus ANCESTRAL SPECIES 439 ENSGT01030000234648.a.a.d ##22 ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Black snub-nosed monkey MODERN SPECIES 473 GRM7 (ENSRBIG00000010613) ##22 LMCD1 (ENSRBIG00000017585) SSUH2 (ENSRBIG00000038459) CAV3 (ENSRBIG00000007905) OXTR (ENSRBIG00000039422) ENSRBIG00000043756 RAD18 (ENSRBIG00000044173) SRGAP3 (ENSRBIG00000035277) THUMPD3 (ENSRBIG00000035954) SETD5 (ENSRBIG00000036095) LHFPL4 (ENSRBIG00000042287) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1474 GRM7 (ENSRROG00000033250) ##22 ENSRROG00000028079 LMCD1 (ENSRROG00000020720) SSUH2 (ENSRROG00000036883) CAV3 (ENSRROG00000016719) OXTR (ENSRROG00000042508) ENSRROG00000034591 RAD18 (ENSRROG00000043948) SRGAP3 (ENSRROG00000033385) THUMPD3 (ENSRROG00000035734) SETD5 (ENSRROG00000029806) LHFPL4 (ENSRROG00000034833) Golden snub-nosed monkey MODERN SPECIES 2532 ENSRROG00000036586 ##22 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00940000169558 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000169558 ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Cebidae_a ANCESTRAL SPECIES 47 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Capuchin MODERN SPECIES 302 GRM7 (ENSCCAG00000020768) ##22 ENSCCAG00000017734 Bolivian squirrel monkey MODERN SPECIES 62 ENSSBOG00000012697 CNTN6 (ENSSBOG00000005957) ENSSBOG00000025385 CNTN4 (ENSSBOG00000025686) IL5RA (ENSSBOG00000020431) TRNT1 (ENSSBOG00000021208) CRBN (ENSSBOG00000024658) LRRN1 (ENSSBOG00000018919) SETMAR (ENSSBOG00000023556) SUMF1 (ENSSBOG00000031100) ITPR1 (ENSSBOG00000021312) BHLHE40 (ENSSBOG00000026538) ARL8B (ENSSBOG00000032344) EDEM1 (ENSSBOG00000023180) GRM7 (ENSSBOG00000000625) ##22 LMCD1 (ENSSBOG00000022801) SSUH2 (ENSSBOG00000025696) CAV3 (ENSSBOG00000032317) OXTR (ENSSBOG00000031766) ENSSBOG00000008434 SRGAP3 (ENSSBOG00000028415) THUMPD3 (ENSSBOG00000023567) SETD5 (ENSSBOG00000034634) LHFPL4 (ENSSBOG00000004674) MTMR14 (ENSSBOG00000029274) CPNE9 (ENSSBOG00000026144) BRPF1 (ENSSBOG00000026552) OGG1 (ENSSBOG00000029878) CAMK1 (ENSSBOG00000029387) TADA3 (ENSSBOG00000032118) Marmoset MODERN SPECIES 6 IL5RA (ENSCJAG00000015437) ENSCJAG00000074141 TRNT1 (ENSCJAG00000015466) ENSCJAG00000015479 ENSCJAG00000058149 ENSCJAG00000070490 ENSCJAG00000071888 SETMAR (ENSCJAG00000015508) SUMF1 (ENSCJAG00000015516) ITPR1 (ENSCJAG00000015544) BHLHE40 (ENSCJAG00000062049) ARL8B (ENSCJAG00000046554) EDEM1 (ENSCJAG00000015856) ENSCJAG00000082150 ENSCJAG00000084935 GRM7 (ENSCJAG00000015891) ##22 ENSCJAG00000065767 ENSCJAG00000078658 LMCD1 (ENSCJAG00000015896) ENSCJAG00000069303 ENSCJAG00000076915 ENSCJAG00000079210 ENSCJAG00000081179 ENSCJAG00000086606 CAV3 (ENSCJAG00000061163) SSUH2 (ENSCJAG00000082032) OXTR (ENSCJAG00000015914) RAD18 (ENSCJAG00000040303) SRGAP3 (ENSCJAG00000015927) THUMPD3 (ENSCJAG00000015949) SETD5 (ENSCJAG00000015959) Mas night monkey MODERN SPECIES 321 GRM7 (ENSANAG00000036825) ##22 LMCD1 (ENSANAG00000034565) SSUH2 (ENSANAG00000038074) ENSANAG00000025958 CAV3 (ENSANAG00000027621) OXTR (ENSANAG00000031655) RAD18 (ENSANAG00000033360) ENSANAG00000037778 SRGAP3 (ENSANAG00000034431) ENSANAG00000024293 THUMPD3 (ENSANAG00000002365) SETD5 (ENSANAG00000005767) LHFPL4 (ENSANAG00000032953) MTMR14 (ENSANAG00000033686) CPNE9 (ENSANAG00000034969) BRPF1 (ENSANAG00000019372) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 Lemuriformes ANCESTRAL SPECIES 73 ENSGT00950000183062.a.a.a ENSGT00940000160282 ENSGT00940000160080 ENSGT00940000160606 ENSGT00940000155198.C ENSGT00940000160890 ENSGT00390000009678 ENSGT00390000016404 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 Mouse lemur MODERN SPECIES 18 EDEM1 (ENSMICG00000000246) ENSMICG00000029477 BHLHE40 (ENSMICG00000043220) ITPR1 (ENSMICG00000004656) SUMF1 (ENSMICG00000016631) ENSMICG00000032203 ENSMICG00000030917 LRRN1 (ENSMICG00000038690) CRBN (ENSMICG00000016619) TRNT1 (ENSMICG00000016615) IL5RA (ENSMICG00000046178) CNTN4 (ENSMICG00000016581) GRM7 (ENSMICG00000010596) ##22 DRD1 (ENSMICG00000042729) ENSMICG00000030242 HRH2 (ENSMICG00000003318) CPLX2 (ENSMICG00000047802) ENSMICG00000028441 SIMC1 (ENSMICG00000015305) ENSMICG00000036088 KIAA1191 (ENSMICG00000037293) ENSMICG00000004020 ENSMICG00000046823 CLTB (ENSMICG00000004024) FAF2 (ENSMICG00000009955) RNF44 (ENSMICG00000009971) CDHR2 (ENSMICG00000027886) SNCB (ENSMICG00000013390) Lemuriformes_a ANCESTRAL SPECIES 122 ENSGT00390000005780.b ENSGT00390000016970 ENSGT00390000000631 ENSGT00390000011082 ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 ENSGT01030000234648.a.a.d ##22 Coquerels sifaka MODERN SPECIES 761 GRM7 (ENSPCOG00000028593) ##22 ENSPCOG00000012766 ENSPCOG00000028014 ENSPCOG00000003755 LRRN1 (ENSPCOG00000010921) CRBN (ENSPCOG00000009726) TRNT1 (ENSPCOG00000022228) IL5RA (ENSPCOG00000011234) CNTN4 (ENSPCOG00000022861) Greater bamboo lemur MODERN SPECIES 457 EMC3 (ENSPSMG00000010117) FANCD2 (ENSPSMG00000010216) ENSPSMG00000010241 ENSPSMG00000010243 ENSPSMG00000010255 VHL (ENSPSMG00000010269) IRAK2 (ENSPSMG00000010285) TATDN2 (ENSPSMG00000010305) GHRL (ENSPSMG00000010345) SEC13 (ENSPSMG00000010410) SUMF1 (ENSPSMG00000010527) ITPR1 (ENSPSMG00000011255) BHLHE40 (ENSPSMG00000011729) ARL8B (ENSPSMG00000011797) EDEM1 (ENSPSMG00000011828) GRM7 (ENSPSMG00000011892) ##22 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 130 CNTN4 (ENSOGAG00000007059) IL5RA (ENSOGAG00000007069) CRBN (ENSOGAG00000007077) ENSOGAG00000033945 ENSOGAG00000030861 LRRN1 (ENSOGAG00000027599) ENSOGAG00000024973 SUMF1 (ENSOGAG00000003702) ITPR1 (ENSOGAG00000003704) BHLHE40 (ENSOGAG00000029762) ARL8B (ENSOGAG00000026863) EDEM1 (ENSOGAG00000003714) ENSOGAG00000025402 ENSOGAG00000034686 ##22 ENSOGAG00000025792 GRM7 (ENSOGAG00000004355) ##22 ENSOGAG00000027930 LMCD1 (ENSOGAG00000009965) SSUH2 (ENSOGAG00000009967) ENSOGAG00000032668 ENSOGAG00000027853 CAV3 (ENSOGAG00000027025) OXTR (ENSOGAG00000001407) ENSOGAG00000029283 RAD18 (ENSOGAG00000001410) SRGAP3 (ENSOGAG00000001412) THUMPD3 (ENSOGAG00000017111) SETD5 (ENSOGAG00000006870) LHFPL4 (ENSOGAG00000032622) MTMR14 (ENSOGAG00000015616) CPNE9 (ENSOGAG00000015624) Bushbaby MODERN SPECIES 130 CHL1 (ENSOGAG00000012057) CNTN6 (ENSOGAG00000002731) CNTN4 (ENSOGAG00000007059) IL5RA (ENSOGAG00000007069) CRBN (ENSOGAG00000007077) ENSOGAG00000033945 ENSOGAG00000030861 LRRN1 (ENSOGAG00000027599) ENSOGAG00000024973 SUMF1 (ENSOGAG00000003702) ITPR1 (ENSOGAG00000003704) BHLHE40 (ENSOGAG00000029762) ARL8B (ENSOGAG00000026863) EDEM1 (ENSOGAG00000003714) ENSOGAG00000025402 ENSOGAG00000034686 ##22 ENSOGAG00000025792 GRM7 (ENSOGAG00000004355) ##22 ENSOGAG00000027930 LMCD1 (ENSOGAG00000009965) SSUH2 (ENSOGAG00000009967) ENSOGAG00000032668 ENSOGAG00000027853 CAV3 (ENSOGAG00000027025) OXTR (ENSOGAG00000001407) ENSOGAG00000029283 RAD18 (ENSOGAG00000001410) SRGAP3 (ENSOGAG00000001412) THUMPD3 (ENSOGAG00000017111) SETD5 (ENSOGAG00000006870) LHFPL4 (ENSOGAG00000032622) Platypus DUPLICATION Platypus MODERN SPECIES 84 VGLL4 (ENSOANG00000014429) CNTN3 (ENSOANG00000021376) CHL1 (ENSOANG00000003342) CNTN6 (ENSOANG00000012175) CNTN4 (ENSOANG00000011370) IL5RA (ENSOANG00000015382) TRNT1 (ENSOANG00000007514) CRBN (ENSOANG00000007513) LRRN1 (ENSOANG00000010239) ENSOANG00000003769 SUMF1 (ENSOANG00000019838) ITPR1 (ENSOANG00000003765) BHLHE40 (ENSOANG00000038785) ARL8B (ENSOANG00000051209) EDEM1 (ENSOANG00000003763) ENSOANG00000012380 ##22 ENSOANG00000002636 ENSOANG00000013668 ##22 ENSOANG00000041232 LMCD1 (ENSOANG00000041669) SSUH2 (ENSOANG00000011551) CAV3 (ENSOANG00000044650) OXTR (ENSOANG00000007720) ENSOANG00000046474 SRGAP3 (ENSOANG00000014483) THUMPD3 (ENSOANG00000014481) SETD5 (ENSOANG00000015208) LHFPL4 (ENSOANG00000036882) MTMR14 (ENSOANG00000015207) CPNE9 (ENSOANG00000041727) BRPF1 (ENSOANG00000012087) Platypus MODERN SPECIES 84 CHL1 (ENSOANG00000003342) CNTN6 (ENSOANG00000012175) CNTN4 (ENSOANG00000011370) IL5RA (ENSOANG00000015382) TRNT1 (ENSOANG00000007514) CRBN (ENSOANG00000007513) LRRN1 (ENSOANG00000010239) ENSOANG00000003769 SUMF1 (ENSOANG00000019838) ITPR1 (ENSOANG00000003765) BHLHE40 (ENSOANG00000038785) ARL8B (ENSOANG00000051209) EDEM1 (ENSOANG00000003763) ENSOANG00000012380 ##22 ENSOANG00000002636 ENSOANG00000013668 ##22 ENSOANG00000041232 LMCD1 (ENSOANG00000041669) SSUH2 (ENSOANG00000011551) CAV3 (ENSOANG00000044650) OXTR (ENSOANG00000007720) ENSOANG00000046474 SRGAP3 (ENSOANG00000014483) THUMPD3 (ENSOANG00000014481) SETD5 (ENSOANG00000015208) LHFPL4 (ENSOANG00000036882) MTMR14 (ENSOANG00000015207) CPNE9 (ENSOANG00000041727) BRPF1 (ENSOANG00000012087) OGG1 (ENSOANG00000045738) CAMK1 (ENSOANG00000012085) Vertebrata ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Hagfish MODERN SPECIES 1034 ENSEBUG00000012074 ENSEBUG00000007782 ENSEBUG00000003837 ENSEBUG00000017066 ENSEBUG00000001550 ENSEBUG00000008011 ##22 ENSEBUG00000007824 ##22 Lamprey MODERN SPECIES 109 MAPKAPK2 (ENSPMAG00000007311) ENSPMAG00000007307 ##22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Amniota ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Mammalia ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Theria ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Eutheria ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Glires ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Rodentia ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Guinea pig MODERN SPECIES 40 VSTM5 (ENSCPOG00000024881) MED17 (ENSCPOG00000014149) C11orf54 (ENSCPOG00000014146) TAF1D (ENSCPOG00000002426) CEP295 (ENSCPOG00000032006) SMCO4 (ENSCPOG00000032286) DEUP1 (ENSCPOG00000011016) SLC36A4 (ENSCPOG00000036098) MTNR1B (ENSCPOG00000010637) ENSCPOG00000010626 CHORDC1 (ENSCPOG00000022614) NAALAD2 (ENSCPOG00000038440) FOLH1 (ENSCPOG00000003797) NOX4 (ENSCPOG00000040335) TYR (ENSCPOG00000010608) ENSCPOG00000039497 ##22 GRM5 (ENSCPOG00000009056) CTSC (ENSCPOG00000014848) RAB38 (ENSCPOG00000033635) TMEM135 (ENSCPOG00000033735) FZD4 (ENSCPOG00000014369) PRSS23 (ENSCPOG00000031160) ME3 (ENSCPOG00000004861) CCDC81 (ENSCPOG00000004853) HIKESHI (ENSCPOG00000020182) EED (ENSCPOG00000001815) PICALM (ENSCPOG00000020758) CCDC83 (ENSCPOG00000015279) ENSCPOG00000006998 CREBZF (ENSCPOG00000000925) TMEM126A (ENSCPOG00000032709) Actinopterygii ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Reedfish MODERN SPECIES 11 ENSECRG00000001115 ENSECRG00000001096 ENSECRG00000001087 ENSECRG00000001065 ENSECRG00000001048 ENSECRG00000001029 ENSECRG00000000995 ENSECRG00000000976 ENSECRG00000000958 stx11a (ENSECRG00000000938) ENSECRG00000000929 ENSECRG00000000888 EPM2A (ENSECRG00000000855) fbxo30a (ENSECRG00000000833) SHPRH (ENSECRG00000000763) ENSECRG00000000710 ##22 GRM1 (ENSECRG00000000685) rab32a (ENSECRG00000000653) stxbp5a (ENSECRG00000004726) SAMD5 (ENSECRG00000004712) sash1a (ENSECRG00000004700) usta (ENSECRG00000004679) tab2 (ENSECRG00000004659) ENSECRG00000004638 ENSECRG00000004620 ppil4 (ENSECRG00000004613) GINM1 (ENSECRG00000004598) katna1 (ENSECRG00000004562) DOP1A (ENSECRG00000004449) pgm3 (ENSECRG00000004409) ENSECRG00000004386 Neopterygii ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Eupercaria ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Ballan wrasse MODERN SPECIES 1631 ENSLBEG00000008823 ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT01030000234648.b ##22 Coho salmon MODERN SPECIES 9 CLPB (ENSOKIG00005010215) phox2a (ENSOKIG00005010203) inppl1a (ENSOKIG00005010021) folr (ENSOKIG00005009968) anapc15 (ENSOKIG00005009955) tomt (ENSOKIG00005009855) ENSOKIG00005009835 lamtor1 (ENSOKIG00005009819) lrrc51 (ENSOKIG00005009789) ENSOKIG00005009749 chordc1a (ENSOKIG00005009586) ENSOKIG00005009574 CTSC (ENSOKIG00005009559) tyr (ENSOKIG00005009538) ENSOKIG00005009528 ENSOKIG00005009516 ##22 ENSOKIG00005009510 PDE2A (ENSOKIG00005009117) ENSOKIG00005009071 ENSOKIG00005009068 FCHSD2 (ENSOKIG00005008874) P2RY2 (ENSOKIG00005008846) ENSOKIG00005008840 relt (ENSOKIG00005008771) ENSOKIG00005008763 ARHGEF17 (ENSOKIG00005008691) P2RY6 (ENSOKIG00005008672) ENSOKIG00005008654 ENSOKIG00005008644 ENSOKIG00005008626 ENSOKIG00005008610 Elephant shark MODERN SPECIES 1592 phf2 (ENSCMIG00000011459) FAM120A (ENSCMIG00000011516) ENSCMIG00000011522 ENSCMIG00000011526 ENSCMIG00000011528 ninj1 (ENSCMIG00000011529) ENSCMIG00000011530 ENSCMIG00000011532 FGD3 (ENSCMIG00000011536) BICD2 (ENSCMIG00000011547) tktb (ENSCMIG00000011571) DCP1A (ENSCMIG00000011651) cacna1da (ENSCMIG00000011699) CHDH (ENSCMIG00000011886) ENSCMIG00000011896 ENSCMIG00000011936 ##22 edem1 (ENSCMIG00000012120) arl8bb (ENSCMIG00000012230) ITPR1 (ENSCMIG00000012625) sumf1 (ENSCMIG00000013754) lrrn1 (ENSCMIG00000013770) ENSCMIG00000013774 crbn (ENSCMIG00000013785) ENSCMIG00000013795 trnt1 (ENSCMIG00000013799) CHL1 (ENSCMIG00000013989) ENSCMIG00000014484