Clupeocephala ANCESTRAL SPECIES 535 ENSGT01100000263474.a.b.a.b.a.c.a.b.b.a.a.a.a #36 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b ##36 ENSGT01100000263559.B #32 ENSGT00940000153092 Euteleosteomorpha ANCESTRAL SPECIES 371 ENSGT01100000263474.a.b.a.b.a.c.a.b.b.a.a.a.a #36 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b ##36 ENSGT01100000263559.B #32 ENSGT01100000263506.a.d #14 ENSGT01100000263567.a.a.d.b ##35 ENSGT01100000263569.a.b.b.e.b Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263559.B #32 Northern pike DUPLICATION Northern pike MODERN SPECIES 27 ENSELUG00000034136 #7 ENSELUG00000032145 #8 ENSELUG00000030187 #9 ENSELUG00000001737 #10 ENSELUG00000025166 #11 ENSELUG00000031217 #12 ENSELUG00000026011 #13 ENSELUG00000033473 #14 ENSELUG00000024924 #15 ENSELUG00000032951 #16 ENSELUG00000031155 #17 ENSELUG00000033583 #18 ENSELUG00000034551 #19 ENSELUG00000032686 #20 ENSELUG00000025616 #21 hist2h3c (ENSELUG00000025164) #22 ENSELUG00000030790 #23 ENSELUG00000031278 #24 ENSELUG00000032875 #25 ENSELUG00000031995 #26 ENSELUG00000032921 #27 ENSELUG00000030394 #28 ENSELUG00000028671 #29 ENSELUG00000031902 #30 ENSELUG00000034593 #31 ENSELUG00000031097 #32 ENSELUG00000024636 #33 ENSELUG00000028816 #34 ENSELUG00000027817 #35 ENSELUG00000030940 #36 ENSELUG00000025623 #37 Northern pike MODERN SPECIES 27 ENSELUG00000031155 #17 ENSELUG00000033583 #18 ENSELUG00000034551 #19 ENSELUG00000032686 #20 ENSELUG00000025616 #21 hist2h3c (ENSELUG00000025164) #22 ENSELUG00000030790 #23 ENSELUG00000031278 #24 ENSELUG00000032875 #25 ENSELUG00000031995 #26 ENSELUG00000032921 #27 ENSELUG00000030394 #28 ENSELUG00000028671 #29 ENSELUG00000031902 #30 ENSELUG00000034593 #31 ENSELUG00000031097 #32 ENSELUG00000024636 #33 ENSELUG00000028816 #34 ENSELUG00000027817 #35 ENSELUG00000030940 #36 ENSELUG00000025623 #37 ENSELUG00000031904 ##32 Acanthomorphata ANCESTRAL SPECIES 231 ENSGT01100000263567.a.b.b ##35 ENSGT00990000203553.c.a.a.b.b.b ##28 ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263474.a.b.a.b.b.b.a.b.b.a ##36 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263559.A #25 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT00990000203553.c.a.a.a.a.b #26 ENSGT01100000263474.a.b.b.o.a.a ##36 ENSGT00950000183089.c.a #37 ENSGT01100000263474.a.b.a.b.a.d ##36 ENSGT00990000203553.c.a.a.b.a.a.a.a.b ##28 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b ##36 ENSGT01100000263559.B #32 ENSGT00940000153092 Cod DUPLICATION Cod MODERN SPECIES 11 spsb3a (ENSGMOG00000017939) mrps34 (ENSGMOG00000028328) nme3 (ENSGMOG00000003474) mapk8ip3 (ENSGMOG00000003414) jpt2 (ENSGMOG00000036879) ENSGMOG00000030019 ENSGMOG00000003340 tmem11 (ENSGMOG00000003334) ENSGMOG00000003322 ENSGMOG00000003296 ENSGMOG00000027126 ##31 ENSGMOG00000037144 ##31 ENSGMOG00000033887 ##28 ENSGMOG00000023244 ##36 ENSGMOG00000022179 #37 ENSGMOG00000023058 #32 ENSGMOG00000032444 ##31 ENSGMOG00000032942 #26 ENSGMOG00000002829 #37 ENSGMOG00000028801 ##31 ENSGMOG00000033765 ENSGMOG00000030436 ##36 ENSGMOG00000037006 ##36 ENSGMOG00000018225 ENSGMOG00000007302 nlk1 (ENSGMOG00000001747) ENSGMOG00000001761 cdipt (ENSGMOG00000001781) ENSGMOG00000031370 ENSGMOG00000029501 ENSGMOG00000005347 Cod MODERN SPECIES 17 zdhhc17 (ENSGMOG00000006985) OSBPL8 (ENSGMOG00000012772) phlda1 (ENSGMOG00000002459) ENSGMOG00000007144 ENSGMOG00000018046 ENSGMOG00000018073 ENSGMOG00000018088 ENSGMOG00000022240 ENSGMOG00000002469 PMPCB (ENSGMOG00000003425) DNAJC2 (ENSGMOG00000003391) PSMC2 (ENSGMOG00000003361) SLC26A5 (ENSGMOG00000003319) ENSGMOG00000024111 ENSGMOG00000022967 ##36 ENSGMOG00000029457 #32 ENSGMOG00000001365 ENSGMOG00000024848 ENSGMOG00000024632 ENSGMOG00000000720 ENSGMOG00000009446 ENSGMOG00000009458 ENSGMOG00000030522 ##35 ENSGMOG00000034473 ##36 ENSGMOG00000025404 ENSGMOG00000030396 ##31 ENSGMOG00000019887 ENSGMOG00000025782 ENSGMOG00000014645 lsm8 (ENSGMOG00000034521) ENSGMOG00000005276 Euacanthomorphacea ANCESTRAL SPECIES 136 ENSGT01020000230360.c.b.a.b.b.d.a.a ##31 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263559.A #25 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT00990000203553.c.a.a.a.a.b #26 ENSGT01100000263474.a.b.b.o.a.a ##36 ENSGT00950000183089.c.a.k.a #37 ENSGT00990000203553.c.a.a.b.a.a.a.a.b ##28 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b ##36 ENSGT01100000263559.B #32 ENSGT00940000153092 Percomorphaceae ANCESTRAL SPECIES 89 ENSGT01020000230360.c.b.a.b.a.b.c.b.b ##31 ENSGT01100000263514.A.f.w.b ENSGT00950000183089.c.b ##37 ENSGT00990000203553.c.a.a.a.a.b #26 ENSGT01100000263474.a.b.b.o.a.a ##36 ENSGT00950000183089.c.a.k.a #37 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.n ##28 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b ##36 ENSGT01100000263559.B #32 ENSGT00940000153092 ENSGT01100000263504.a.b.b.b.a.b ENSGT00990000203553.c.a.a.b.b.b ##28 ENSGT01100000263567.a.b.b ##35 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.a ##28 ENSGT01100000263474.a.b.a.b.a.d ##36 ENSGT00950000183089.c.a.k.b.b #37 ENSGT01100000263567.a.a.d.b ##35 ENSGT01100000263506.a.d #14 ENSGT01060000248528.b ENSGT01100000263514.A.e.a ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000163509.a.b Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000165075.a.a ENSGT00940000175327 ENSGT00670000098179.d.a ENSGT00530000063371.C.a ENSGT00940000164705 ENSGT00390000010712 ENSGT00940000156835.k ENSGT00940000161176 ENSGT00550000074939 ENSGT00940000163701.b.a.b.b.b ENSGT00940000163509.a.b ENSGT00940000170476 ENSGT00940000156944.a.a ENSGT01020000230360.d ##31 ENSGT01100000263474.a.b.b.o.b.a ##36 ENSGT01100000263559.B #32 ENSGT00940000153092 ENSGT00390000000002.a.a.b ENSGT00390000001803 ENSGT00940000155150.b.b ENSGT00390000000703 ENSGT00950000182994.A ENSGT00390000001134.b.ab ENSGT01100000263483.E.a.c.a ENSGT01100000263483.F.a ENSGT01100000263483.E.a.c.b ENSGT00390000001134.b.`b.a ENSGT00940000165879 ENSGT00390000006178 ENSGT00940000178567 ENSGT00940000157138.b Percomorphaceae_C ANCESTRAL SPECIES 43 ENSGT01020000230360.c.b.a.b.b.d.b.a.a ##31 ENSGT00990000203553.c.a.a.a.a.a ##28 ENSGT00950000183089.c.a.k.b.a.a #37 ENSGT01100000263559.B #32 ENSGT00940000153092 Percomorphaceae_D ANCESTRAL SPECIES ENSGT01100000263559.B #32 Anabantaria ANCESTRAL SPECIES ENSGT01100000263559.B #32 Anabantoidei ANCESTRAL SPECIES ENSGT01100000263559.B #32 Climbing perch MODERN SPECIES 13 ENSATEG00000018958 SLC39A8 (ENSATEG00000018981) manba (ENSATEG00000019029) ube2d3 (ENSATEG00000019090) ENSATEG00000019100 ENSATEG00000019114 ENSATEG00000019160 ENSATEG00000019177 MTARC2 (ENSATEG00000026060) ENSATEG00000026817 ezra (ENSATEG00000019236) nenf (ENSATEG00000019292) pacc1 (ENSATEG00000019312) ENSATEG00000027828 ##36 ENSATEG00000019397 #37 ENSATEG00000028625 #32 ENSATEG00000026927 ##28 ENSATEG00000028037 ENSATEG00000027307 ENSATEG00000027028 ENSATEG00000027301 ZNF106 (ENSATEG00000019498) CAPN3 (ENSATEG00000019530) GANC (ENSATEG00000019583) TMEM87A (ENSATEG00000019615) VPS39 (ENSATEG00000019651) GALNT16 (ENSATEG00000019745) ENSATEG00000019775 EXD2 (ENSATEG00000019834) ENSATEG00000019845 ENSATEG00000019883 Eupercaria DUPLICATION Eupercaria DUPLICATION Eupercaria ANCESTRAL SPECIES ENSGT01100000263559.B.kf.a #32 Tetraodontidae ANCESTRAL SPECIES ENSGT01100000263559.B.kf.a #32 Tetraodon MODERN SPECIES 26 angel2 (ENSTNIG00000006802) vegfab (ENSTNIG00000009142) ENSTNIG00000008862 KCNH2 (ENSTNIG00000008782) ENSTNIG00000000924 ENSTNIG00000008781 ENSTNIG00000000071 aoc1 (ENSTNIG00000008780) ENSTNIG00000008779 SLC12A7 (ENSTNIG00000008778) ENSTNIG00000008777 ENSTNIG00000008776 ENSTNIG00000001078 si:dkey-23a13.17 (ENSTNIG00000008775) #37 ENSTNIG00000008774 ##31 hist2h3c (ENSTNIG00000008773) #32 ENSTNIG00000008772 GFOD1 (ENSTNIG00000008771) KIF5B (ENSTNIG00000008770) ARHGAP12 (ENSTNIG00000008769) zeb1b (ENSTNIG00000008768) znf438 (ENSTNIG00000008767) ENSTNIG00000008766 pomp (ENSTNIG00000008765) ENSTNIG00000008764 ENSTNIG00000008763 ENSTNIG00000008762 NSMAF (ENSTNIG00000008761) ENSTNIG00000000016 ENSTNIG00000008760 SLC22A17 (ENSTNIG00000008759) Eupercaria ANCESTRAL SPECIES ENSGT01100000263559.B.kf.b #32 Eupecaria_A ANCESTRAL SPECIES 88 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT01100000263559.B.kf.b #32 Eupecaria_B ANCESTRAL SPECIES 89 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT01100000263559.B.kf.b #32 Eupecaria_C ANCESTRAL SPECIES 121 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT01100000263559.B.kf.b #32 Eupercaria_incertae_sedis ANCESTRAL SPECIES 152 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##31 ENSGT01100000263559.B.kf.b #32 European seabass MODERN SPECIES 20 ENSDLAG00005021846 ENSDLAG00005022388 ENSDLAG00005022420 ENSDLAG00005022475 ENSDLAG00005022481 ENSDLAG00005030440 ##28 ENSDLAG00005030509 #37 ENSDLAG00005034529 ##36 ENSDLAG00005029295 ENSDLAG00005020580 ENSDLAG00005033212 ##36 ENSDLAG00005032920 ##28 ENSDLAG00005026756 ENSDLAG00005004752 ##36 ENSDLAG00005032305 ENSDLAG00005026477 #32 ENSDLAG00005022566 map2k7 (ENSDLAG00005023630) ENSDLAG00005023678 si:ch211-214c7.5 (ENSDLAG00005023995) ENSDLAG00005023998 mcoln1a (ENSDLAG00005024028) ENSDLAG00005024396 ENSDLAG00005015356 ENSDLAG00005030621 ENSDLAG00005030658 ENSDLAG00005029691 ENSDLAG00005034838 ENSDLAG00005015380 ENSDLAG00005024431 ENSDLAG00005024565 Large yellow croaker MODERN SPECIES 481 casp3a (ENSLCRG00005018141) STOX2 (ENSLCRG00005018142) tll1 (ENSLCRG00005018147) cpe (ENSLCRG00005018297) msmo1 (ENSLCRG00005018343) KLHL2 (ENSLCRG00005018351) med28 (ENSLCRG00005018669) ENSLCRG00005018674 ENSLCRG00005018858 ENSLCRG00005018860 ENSLCRG00005018862 ##36 ENSLCRG00005018863 ENSLCRG00005018864 ##28 ENSLCRG00005018865 ENSLCRG00005018867 ##31 ENSLCRG00005018868 #32 SLC25A38 (ENSLCRG00005018870) ENSLCRG00005018872 ttc26 (ENSLCRG00005018878) ubn2a (ENSLCRG00005019003) ENSLCRG00005019048 cygb2 (ENSLCRG00005002407) SPHK1 (ENSLCRG00005002415) UBE2O (ENSLCRG00005002453) aanat1 (ENSLCRG00005003294) RHBDF2 (ENSLCRG00005003314) acox1 (ENSLCRG00005004566) ten1 (ENSLCRG00005007788) evpla (ENSLCRG00005007792) srp68 (ENSLCRG00005007813) POLG2 (ENSLCRG00005008140) Tetraodontidae ANCESTRAL SPECIES ENSGT01100000263559.B.kf.b #32 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 dph2 (ENSTNIG00000008756) zgc:165532 (ENSTNIG00000008755) rgs9bp (ENSTNIG00000008754) zgc:56231 (ENSTNIG00000008753) RPS20 (ENSTNIG00000001523) ANKS6 (ENSTNIG00000008752) ENSTNIG00000008751 pigm (ENSTNIG00000008750) serpinb1l3 (ENSTNIG00000008749) snx16 (ENSTNIG00000008748) ENSTNIG00000001285 WWP1 (ENSTNIG00000008747) ENSTNIG00000008746 ENSTNIG00000008745 ENSTNIG00000008744 #37 ENSTNIG00000008743 #32 cpne3 (ENSTNIG00000008742) rmdn1 (ENSTNIG00000008741) ENSTNIG00000008740 ENSTNIG00000001014 abca4a (ENSTNIG00000008739) ENSTNIG00000008738 ENSTNIG00000008736 ENSTNIG00000008734 #37 cpne3 (ENSTNIG00000008732) cpne3 (ENSTNIG00000008731) idi1 (ENSTNIG00000008730) wdr37 (ENSTNIG00000008729) ADARB2 (ENSTNIG00000008728) PFKP (ENSTNIG00000008727) klf6a (ENSTNIG00000008726) Tetraodon MODERN SPECIES 26 svopl (ENSTNIG00000003457) mical3b (ENSTNIG00000003458) lta4h (ENSTNIG00000003351) dennd6b (ENSTNIG00000003350) gcc1 (ENSTNIG00000003349) arf5 (ENSTNIG00000003348) lamtor4 (ENSTNIG00000001997) atp6v1f (ENSTNIG00000001217) tnpo3 (ENSTNIG00000003347) irf5 (ENSTNIG00000003346) fbxo7 (ENSTNIG00000003345) kiaa0930 (ENSTNIG00000003344) nup50 (ENSTNIG00000003343) KCNA1 (ENSTNIG00000002493) KCNA5 (ENSTNIG00000000276) ENSTNIG00000002494 #32 ENSTNIG00000002495 ##31 CNOT2 (ENSTNIG00000002496) KCNMB4 (ENSTNIG00000002497) ptprb (ENSTNIG00000002498) PTPRR (ENSTNIG00000002499) ENSTNIG00000002500 rab21 (ENSTNIG00000002501) cand1 (ENSTNIG00000006486) ENSTNIG00000006485 ENSTNIG00000006484 ENSTNIG00000001329 ENSTNIG00000006482 ECHDC3 (ENSTNIG00000001958) kcnj8 (ENSTNIG00000006480) abcc9 (ENSTNIG00000006479) Fugu MODERN SPECIES 1 mpp7a (ENSTRUG00000004016) ENSTRUG00000028053 ODAD2 (ENSTRUG00000004452) ENSTRUG00000031405 ENSTRUG00000030866 rab18a (ENSTRUG00000004984) mkxa (ENSTRUG00000004560) itgb1a (ENSTRUG00000004551) nrp1a (ENSTRUG00000002836) ENSTRUG00000002885 ENSTRUG00000029964 ENSTRUG00000028907 ENSTRUG00000029393 ENSTRUG00000012047 #15 ENSTRUG00000028313 ##31 ENSTRUG00000027909 #32 ENSTRUG00000029713 ##28 ENSTRUG00000031791 ENSTRUG00000031069 ENSTRUG00000027530 CUL2 (ENSTRUG00000011837) CCNY (ENSTRUG00000027825) GJD4 (ENSTRUG00000020169) fzd8a (ENSTRUG00000011564) klf6a (ENSTRUG00000021570) PFKP (ENSTRUG00000011032) ADARB2 (ENSTRUG00000010848) wdr37 (ENSTRUG00000010707) idi1 (ENSTRUG00000010615) cpne3 (ENSTRUG00000009713) cpne3 (ENSTRUG00000021775) Eupercaria ANCESTRAL SPECIES 56 ENSGT01020000230360.c.b.a.b.b.d.b.a.a ##31 ENSGT00990000203553.c.a.a.a.a.a ##28 ENSGT00950000183089.c.a.k.b.a.a #37 ENSGT01100000263559.B.lf #32 ENSGT00940000153092 Eupecaria_A ANCESTRAL SPECIES 57 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.B.lf #32 Eupecaria_B ANCESTRAL SPECIES 52 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.B.lf #32 Eupecaria_C ANCESTRAL SPECIES ENSGT01100000263559.B.lf #32 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT01100000263559.B.lf #32 Large yellow croaker MODERN SPECIES 491 gpr22a (ENSLCRG00005012646) ENSLCRG00005012649 ENSLCRG00005012650 rab21 (ENSLCRG00005012651) KCNMB4 (ENSLCRG00005012653) ENSLCRG00005012658 PTPRR (ENSLCRG00005012683) ENSLCRG00005013153 ENSLCRG00005013157 ENSLCRG00005013175 ENSLCRG00005013176 ENSLCRG00005013177 #14 ENSLCRG00005013178 ##31 ENSLCRG00005013182 ##37 ENSLCRG00005013184 ENSLCRG00005013185 #32 KCNA5 (ENSLCRG00005013188) KCNA1 (ENSLCRG00005013189) ENSLCRG00005013190 ARHGAP8 (ENSLCRG00005013192) ENSLCRG00005013194 nup50 (ENSLCRG00005013195) kiaa0930 (ENSLCRG00005013198) fbxo7 (ENSLCRG00005013243) RTCB (ENSLCRG00005013246) xpot (ENSLCRG00005013248) rpl18a (ENSLCRG00005013251) ENSLCRG00005013259 pthlha (ENSLCRG00005013301) C11orf98 (ENSLCRG00005013303) ENSLCRG00005013306 Perciformes ANCESTRAL SPECIES 74 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.B.lf #32 Perciformes_a ANCESTRAL SPECIES ENSGT01100000263559.B.lf #32 Pike perch MODERN SPECIES 157 ENSSLUG00000017045 ##36 ENSSLUG00000016937 ENSSLUG00000016927 ##28 ENSSLUG00000016921 ##36 ENSSLUG00000016918 ##31 ENSSLUG00000016914 ##35 ENSSLUG00000016907 steap4 (ENSSLUG00000016831) ENSSLUG00000016787 ENSSLUG00000016727 ENSSLUG00000016714 ENSSLUG00000016707 ENSSLUG00000016703 ##36 ENSSLUG00000016697 ##36 ENSSLUG00000016695 ##31 ENSSLUG00000016691 #32 svbp (ENSSLUG00000016684) wnt7aa (ENSSLUG00000016680) ptpdc1a (ENSSLUG00000016668) barx1 (ENSSLUG00000016661) phf2 (ENSSLUG00000016581) FAM120A (ENSSLUG00000016526) CASS4 (ENSSLUG00000016507) cstf1 (ENSSLUG00000016501) ENSSLUG00000016494 ENSSLUG00000016486 pdrg1 (ENSSLUG00000016480) ENSSLUG00000016477 aldh1l1 (ENSSLUG00000016151) ENSSLUG00000016125 ENSSLUG00000016106 Cottioidei ANCESTRAL SPECIES 111 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ENSGT01100000263559.B.lf #32 Stickleback MODERN SPECIES 101 ENSGACG00000010538 ENSGACG00000010540 ENSGACG00000010544 H3C15 (ENSGACG00000010547) #32 Tetraodontidae ANCESTRAL SPECIES 196 ENSGT01100000263569.a.b.a.b.a.a ENSGT01100000263504.a.b.b.b.b.y ENSGT01100000263559.A #25 ENSGT00950000183089.c.a.k.b.a.a #37 ENSGT01100000263559.B.lf #32 ENSGT01060000248528.b ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b.c.a ##31 Tetraodon MODERN SPECIES 22 GPR119 (ENSTNIG00000001505) clk4b (ENSTNIG00000007593) ENSTNIG00000007594 btg4 (ENSTNIG00000007595) hnrnpaba (ENSTNIG00000007596) ENSTNIG00000007597 hspb9l (ENSTNIG00000001965) ENSTNIG00000007598 zmat2 (ENSTNIG00000007599) lcp2a (ENSTNIG00000001645) FOXI2 (ENSTNIG00000001292) ENSTNIG00000000447 ENSTNIG00000007600 ADRA1B (ENSTNIG00000007601) ENSTNIG00000007602 #37 ENSTNIG00000007603 #32 ENSTNIG00000000699 APBB3 (ENSTNIG00000007604) ENSTNIG00000007605 camk2a (ENSTNIG00000007606) rps14 (ENSTNIG00000007607) chm (ENSTNIG00000007608) ENSTNIG00000007609 ENSTNIG00000000702 ENSTNIG00000007610 ENSTNIG00000007611 ENSTNIG00000007612 ENSTNIG00000000432 ENSTNIG00000007613 DBN1 (ENSTNIG00000007614) GRK6 (ENSTNIG00000007615) Fugu DUPLICATION Fugu MODERN SPECIES 8 ENSTRUG00000023039 #37 ENSTRUG00000025869 ENSTRUG00000032970 #25 ENSTRUG00000002689 #37 ENSTRUG00000027124 #25 ENSTRUG00000026986 ENSTRUG00000029643 ENSTRUG00000029122 #19 ENSTRUG00000032916 ENSTRUG00000024593 ##35 ENSTRUG00000032531 ##31 ENSTRUG00000024579 ENSTRUG00000032950 #32 ENSTRUG00000021312 ##31 ENSTRUG00000026851 #37 ENSTRUG00000026537 #32 ENSTRUG00000032005 ENSTRUG00000020802 ENSTRUG00000029500 nansa (ENSTRUG00000015552) clta (ENSTRUG00000015571) gne (ENSTRUG00000015607) cplx2l (ENSTRUG00000015618) TMOD1 (ENSTRUG00000015628) stra6l (ENSTRUG00000019975) ENSTRUG00000022760 abca1a (ENSTRUG00000015743) ENSTRUG00000032261 SGCZ (ENSTRUG00000015887) tusc3 (ENSTRUG00000017650) ENSTRUG00000017618 Fugu MODERN SPECIES 8 xpa (ENSTRUG00000027763) slc24a2 (ENSTRUG00000015445) H3C1 (ENSTRUG00000023777) ENSTRUG00000023039 #37 ENSTRUG00000025869 ENSTRUG00000032970 #25 ENSTRUG00000002689 #37 ENSTRUG00000027124 #25 ENSTRUG00000026986 ENSTRUG00000029643 ENSTRUG00000029122 #19 ENSTRUG00000032916 ENSTRUG00000024593 ##35 ENSTRUG00000032531 ##31 ENSTRUG00000024579 ENSTRUG00000032950 #32 ENSTRUG00000021312 ##31 ENSTRUG00000026851 #37 ENSTRUG00000026537 #32 ENSTRUG00000032005 ENSTRUG00000020802 ENSTRUG00000029500 nansa (ENSTRUG00000015552) clta (ENSTRUG00000015571) gne (ENSTRUG00000015607) cplx2l (ENSTRUG00000015618) TMOD1 (ENSTRUG00000015628) stra6l (ENSTRUG00000019975) ENSTRUG00000022760 abca1a (ENSTRUG00000015743) ENSTRUG00000032261 Ovalentaria ANCESTRAL SPECIES 122 ENSGT01100000263474.a.b.b.o.b.a ##36 ENSGT01100000263559.B #32 Atherinomorphae ANCESTRAL SPECIES 23 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263506.a.d #14 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.b ##28 ENSGT01030000234575.c.a.a.a.a.a.b.a.a ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b ENSGT00390000005412 ENSGT00940000155563.k.b.b ENSGT01050000244891.E.a.a ENSGT00390000002361 ENSGT00940000154830.d ENSGT00390000009760 ENSGT00940000157228.i.a ENSGT00940000157228.i.b ENSGT00940000156104.B Oryzias ANCESTRAL SPECIES ENSGT01100000263559.B #32 Oryzias_b ANCESTRAL SPECIES ENSGT01100000263559.B #32 Javanese ricefish MODERN SPECIES PRPSAP1 (ENSOJAG00000015912) ENSOJAG00000016095 ENSOJAG00000016208 #37 ENSOJAG00000016236 ##28 ENSOJAG00000016257 ENSOJAG00000016278 ENSOJAG00000016296 ##31 ENSOJAG00000016305 ENSOJAG00000016332 ENSOJAG00000016343 ENSOJAG00000016350 ENSOJAG00000016363 ENSOJAG00000016397 ENSOJAG00000016431 ##31 ENSOJAG00000016444 ENSOJAG00000016476 #32 ENSOJAG00000016480 ##28 ENSOJAG00000016496 #37 capn9 (ENSOJAG00000016557) taf5l (ENSOJAG00000017027) nup133 (ENSOJAG00000017093) ENSOJAG00000018258 ENSOJAG00000018276 CCSAP (ENSOJAG00000018296) cdc6 (ENSOJAG00000018306) ENSOJAG00000018403 MRPL21 (ENSOJAG00000018424) mrpl45 (ENSOJAG00000018748) ENSOJAG00000018767 socs7 (ENSOJAG00000018901) sp2 (ENSOJAG00000018969) Cyprinodontiformes ANCESTRAL SPECIES 97 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263506.a.d #14 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.b ##28 ENSGT01100000263569.a.b.a.b.a.b.b.a Aplocheiloidei ANCESTRAL SPECIES 399 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263506.a.d #14 Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015002783 ENSNFUG00015002780 or30bt5 (ENSNFUG00015002776) ENSNFUG00015002773 ENSNFUG00015002771 ENSNFUG00015002767 or71aq1 (ENSNFUG00015002766) ENSNFUG00015002763 ENSNFUG00015002759 PGAP2 (ENSNFUG00015002756) stim1a (ENSNFUG00015002437) ENSNFUG00015002375 ENSNFUG00015002371 ENSNFUG00015002368 #37 ENSNFUG00015002366 ##31 ENSNFUG00015002361 #32 SI (ENSNFUG00015002356) ENSNFUG00015002351 robo2 (ENSNFUG00015001043) ENSNFUG00015000779 ENSNFUG00015000777 ENSNFUG00015000773 ENSNFUG00015000770 ROBO1 (ENSNFUG00015000725) ENSNFUG00015000662 APBB1 (ENSNFUG00015000646) ILK (ENSNFUG00015000630) RRP8 (ENSNFUG00015000624) CR954145.1 (ENSNFUG00015000621) ENSNFUG00015000619 DIABLO (ENSNFUG00015000613) Cyprinodontoidei ANCESTRAL SPECIES 159 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263567.a.b.b ##35 Poeciliinae ANCESTRAL SPECIES 95 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263567.a.b.b ##35 Poecilia ANCESTRAL SPECIES 150 ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.b #37 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263567.a.b.b ##35 NAME_6 ANCESTRAL SPECIES 195 ENSGT00950000183089.c.a.k.b.b.k.b.b #37 ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.b #37 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263567.a.b.b ##35 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b.i.a ##31 ENSGT01100000263504.a.b.b.b.a.b ENSGT01030000234540.C.k ENSGT01030000234540.C.l ENSGT00940000172777 ENSGT00390000012496.b.h ENSGT00940000158350 ENSGT00950000182933.C.j ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.v ENSGT00950000183127.c.b.d.a.b.a.a.a.a.a.d.a ENSGT00940000161847.b.a.e.b.pb.a.f.a ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.u.a.a ENSGT01100000263538.A.a.a.a.j.a.b.b Sailfin molly MODERN SPECIES 2327 ENSPLAG00000004357 ENSPLAG00000004305 #32 ENSPLAG00000004235 ENSPLAG00000004175 mrpl48 (ENSPLAG00000004162) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 320 ARHGAP8 (ENSPFOG00000015678) ENSPFOG00000015620 nup50 (ENSPFOG00000015591) kiaa0930 (ENSPFOG00000015526) fbxo7 (ENSPFOG00000015474) h2ax (ENSPFOG00000020620) #31 ENSPFOG00000015460 ENSPFOG00000020845 ##35 ENSPFOG00000020844 ENSPFOG00000015449 #37 KCNMB4 (ENSPFOG00000015443) CNOT2 (ENSPFOG00000015440) ENSPFOG00000015423 #31 ENSPFOG00000020843 ENSPFOG00000020842 #37 H3C15 (ENSPFOG00000020841) #32 ENSPFOG00000020840 ENSPFOG00000015415 #31 Amazon molly MODERN SPECIES 886 ENSPFOG00000017848 ENSPFOG00000017855 ENSPFOG00000017852 ENSPFOG00000020819 ##31 hist2h3c (ENSPFOG00000024515) #32 ENSPFOG00000020820 ENSPFOG00000017862 ENSPFOG00000017865 ENSPFOG00000023736 ENSPFOG00000020821 ##31 ENSPFOG00000017867 ENSPFOG00000017868 ENSPFOG00000017874 ENSPFOG00000023356 ENSPFOG00000017885 SMURF2 (ENSPFOG00000017936) Ovalentaria_B ANCESTRAL SPECIES 153 ENSGT01100000263474.a.b.b.o.b.a ##36 ENSGT01100000263559.B #32 Pomacentridae ANCESTRAL SPECIES ENSGT01100000263559.B #32 Pomacentridae_A ANCESTRAL SPECIES ENSGT01100000263559.B #32 Amphiprion ANCESTRAL SPECIES 385 ENSGT01100000263474.a.b.b.o.b.a.b.b.b.a ##36 ENSGT01100000263559.B #32 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 725 ENSAOCG00000000116 ##36 ENSAOCG00000003971 ENSAOCG00000003968 #37 ENSAOCG00000003960 ##35 ENSAOCG00000003940 ENSAOCG00000003918 ENSAOCG00000003915 ##36 ENSAOCG00000003891 ENSAOCG00000003858 ##31 ENSAOCG00000003855 ##28 ENSAOCG00000003837 ##36 ENSAOCG00000003834 ##28 ENSAOCG00000000102 ##36 ENSAOCG00000003824 #32 ENSAOCG00000003806 ##31 ENSAOCG00000003801 ##36 ENSAOCG00000003765 ##31 ENSAOCG00000003759 ENSAOCG00000003736 atpv0e2 (ENSAOCG00000003732) ENSAOCG00000003726 ENTPD7 (ENSAOCG00000003719) slc25a28 (ENSAOCG00000003701) NKX2-3 (ENSAOCG00000003691) Clown anemonefish MODERN SPECIES 1438 msmo1 (ENSAOCG00000009513) KLHL2 (ENSAOCG00000009486) med28 (ENSAOCG00000009427) lap3 (ENSAOCG00000009407) ENSAOCG00000009370 ##36 ENSAOCG00000009358 ##28 ENSAOCG00000009341 ##36 ENSAOCG00000009227 #32 H4C7 (ENSAOCG00000009141) ##28 ENSAOCG00000009129 #37 ENSAOCG00000000560 ##36 ENSAOCG00000009105 Cichlidae ANCESTRAL SPECIES ENSGT01100000263559.B #32 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT01100000263559.B #32 Nile tilapia MODERN SPECIES 1 ENSONIG00000021215 ENSONIG00000017828 ENSONIG00000030223 ENSONIG00000033957 ENSONIG00000021216 chm (ENSONIG00000017832) rps14 (ENSONIG00000017838) camk2a (ENSONIG00000017842) ENSONIG00000017849 APBB3 (ENSONIG00000017851) ENSONIG00000028803 ENSONIG00000026809 ENSONIG00000017862 ENSONIG00000017854 ENSONIG00000032976 ENSONIG00000037819 #32 ENSONIG00000037959 ENSONIG00000021217 ##31 ADRA1B (ENSONIG00000036711) ENSONIG00000035922 ENSONIG00000028584 ENSONIG00000041680 ENSONIG00000017861 ponzr2 (ENSONIG00000039353) nhp2 (ENSONIG00000028712) ENSONIG00000040509 lcp2a (ENSONIG00000017868) zmat2 (ENSONIG00000017873) slbp2 (ENSONIG00000017877) ENSONIG00000017879 hspb9l (ENSONIG00000021218) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT01100000263559.B #32 Haplochromini ANCESTRAL SPECIES ENSGT01100000263559.B #32 Haplochromini_A ANCESTRAL SPECIES 168 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263514.A.e.a Haplochromini_B ANCESTRAL SPECIES 165 ENSGT01100000263559.B #32 ENSGT01060000248528.b.xe ENSGT01100000263504.a.b.b.b.b.y ENSGT01020000230360.c.b.a.b.a.b.c.a.a.b ##31 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 15 ENSACLG00000004873 ENSACLG00000004870 ENSACLG00000004849 ENSACLG00000004844 ENSACLG00000004829 ENSACLG00000004826 ENSACLG00000004682 ENSACLG00000004657 ENSACLG00000004600 ENSACLG00000004588 ENSACLG00000004546 ENSACLG00000004536 ENSACLG00000004526 ENSACLG00000004511 ##28 ENSACLG00000004496 ##31 ENSACLG00000004412 #32 ENSACLG00000004366 ENSACLG00000004265 ENSACLG00000004239 ENSACLG00000003570 ENSACLG00000003557 ENSACLG00000003546 ENSACLG00000003542 ENSACLG00000002995 ENSACLG00000002979 ENSACLG00000002945 ENSACLG00000002885 ENSACLG00000002844 ENSACLG00000002810 ENSACLG00000002785 ENSACLG00000002771 Eastern happy MODERN SPECIES 8 ing3 (ENSACLG00000006777) tspan12 (ENSACLG00000006802) gpr19 (ENSACLG00000006815) crebl2 (ENSACLG00000006824) dusp16 (ENSACLG00000006831) eps8a (ENSACLG00000006856) PTPRO (ENSACLG00000006942) ENSACLG00000007016 socs2 (ENSACLG00000007022) FLNC (ENSACLG00000007030) ENSACLG00000007078 sco2 (ENSACLG00000007084) ncaph2 (ENSACLG00000007091) kcnd2 (ENSACLG00000007563) si:ch73-368j24.12 (ENSACLG00000007578) ENSACLG00000007594 #32 ENSACLG00000007642 ##28 KCNA5 (ENSACLG00000007649) ENSACLG00000007661 ARHGAP8 (ENSACLG00000008301) PHF21B (ENSACLG00000008319) nup50 (ENSACLG00000008324) kiaa0930 (ENSACLG00000008334) fbxo7 (ENSACLG00000008351) rtcb (ENSACLG00000008367) xpot (ENSACLG00000008404) rpl18a (ENSACLG00000008450) ENSACLG00000008466 pthlha (ENSACLG00000008477) ENSACLG00000008489 C11orf98 (ENSACLG00000008497) Eastern happy MODERN SPECIES 26 ENSACLG00000012714 gmppb (ENSACLG00000012735) ENSACLG00000012742 ENSACLG00000012775 ENSACLG00000012781 ##35 ENSACLG00000012883 #27 ENSACLG00000012889 ##28 gdf3 (ENSACLG00000012901) pgap2 (ENSACLG00000012916) ENSACLG00000012921 ENSACLG00000012923 ENSACLG00000012956 ENSACLG00000012957 ##31 ENSACLG00000012958 #14 ENSACLG00000012970 ##31 ENSACLG00000012973 #32 ENSACLG00000013002 ENSACLG00000013004 ENSACLG00000013009 ENSACLG00000013076 ENSACLG00000013120 ENSACLG00000013154 ENSACLG00000013166 ENSACLG00000013171 ENSACLG00000013363 ENSACLG00000013365 ENSACLG00000013423 ENSACLG00000013428 ENSACLG00000013452 ENSACLG00000013465 Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 5 GALNT10 (ENSMMDG00005015872) ENSMMDG00005015871 sap30l (ENSMMDG00005015870) ENSMMDG00005015866 ponzr2 (ENSMMDG00005015863) ENSMMDG00005015862 ENSMMDG00005015860 ##31 ENSMMDG00005015857 ##28 ENSMMDG00005015856 #37 ENSMMDG00005015854 ENSMMDG00005015852 ##31 ENSMMDG00005015849 ##28 ENSMMDG00005015847 #37 ENSMMDG00005015845 #23 ENSMMDG00005015843 ##36 ENSMMDG00005015841 #32 ENSMMDG00005015839 #19 ENSMMDG00005015837 ##31 ENSMMDG00005015835 ##36 ENSMMDG00005015832 ##28 ENSMMDG00005015830 ENSMMDG00005015827 #37 ENSMMDG00005015826 ##28 ENSMMDG00005015824 ##31 zgc:123105 (ENSMMDG00005015821) clk4b (ENSMMDG00005015818) btg4 (ENSMMDG00005015817) hnrnpaba (ENSMMDG00005015814) st6gal1 (ENSMMDG00005015811) ncf1 (ENSMMDG00005015807) gria1b (ENSMMDG00005015799) Pinecone sodierfish MODERN SPECIES 22 ENSMMDG00005000619 ENSMMDG00005000616 ENSMMDG00005000610 ##35 ENSMMDG00005000607 ##31 ENSMMDG00005000466 slc18a2 (ENSMMDG00005000429) ENSMMDG00005000418 ENSMMDG00005000414 ENSMMDG00005000408 ENSMMDG00005000399 ENSMMDG00005000394 ENSMMDG00005000388 ENSMMDG00005000384 ENSMMDG00005000379 ##28 ENSMMDG00005000375 ##36 ENSMMDG00005000372 #32 ENSMMDG00005000367 ##31 ENSMMDG00005000363 #37 ENSMMDG00005000361 ##36 ENSMMDG00005000356 #26 ENSMMDG00005000351 ##31 ENSMMDG00005000345 ##35 ENSMMDG00005000335 ENSMMDG00005007722 ENSMMDG00005007721 ##28 ENSMMDG00005007719 ##35 ENSMMDG00005007715 ##36 ENSMMDG00005007713 #37 ENSMMDG00005007711 ##28 ENSMMDG00005007708 ##35 psmd3 (ENSMMDG00005006395) Otomorpha ANCESTRAL SPECIES 494 ENSGT00990000203553.c.a.a.b.b.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.a.d ##31 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263474.a.b.a.b.a.d ##36 ENSGT00950000183089.c.a #37 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b #31 ENSGT01100000263514.A.f ENSGT01020000230360.c.b.a.a.b ##31 Otophysi ANCESTRAL SPECIES 389 ENSGT01020000230360.c.b.a.a.a.a.a.d.i ##31 ENSGT01100000263559.B #32 ENSGT01060000248528.b ENSGT01100000263474.a.b.a.b.a.d ##36 ENSGT00950000183089.c.a #37 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b #31 ENSGT01100000263514.A.f ENSGT01020000230360.c.b.a.a.b ##31 Cyprinoidei ANCESTRAL SPECIES 191 ENSGT00940000159147.b.b ENSGT00950000182991.A.b.b ENSGT00990000203615.b.a.a.a.a.g.a.b ENSGT00940000166094 ENSGT00940000162700.f ENSGT00950000183089.c.a.m.a.b #37 ENSGT01100000263559.B #32 ENSGT01060000248528.b.n ENSGT01100000263474.a.b.a.b.a.d ##36 ENSGT00950000183089.c.a.m.a.a #37 ENSGT01100000263559.A.db #25 ENSGT01060000248528.b.m.b ENSGT01020000230360.c.b.a.a.a.a.a.d.i ##31 ENSGT00940000156472.c Cyprininae ANCESTRAL SPECIES 1551 ENSGT00950000183089.c.a.m.a.b.a.b #37 ENSGT01100000263559.B #32 Cyprininae_a ANCESTRAL SPECIES 1176 ENSGT00950000183089.c.a.m.a.b.a.b #37 ENSGT01100000263559.B #32 Golden-line barbel MODERN SPECIES 3741 ENSSGRG00000004848 ##31 H3C15 (ENSSGRG00000004855) #32 ENSSGRG00000004875 ##28 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 37 ENSCCRG00000054426 ENSCCRG00000011168 lrrk2 (ENSCCRG00000023338) ENSCCRG00000023607 spi1a (ENSCCRG00000067414) ENSCCRG00000023629 FIBIN (ENSCCRG00000064565) slc5a12 (ENSCCRG00000001602) ANO3 (ENSCCRG00000001456) svip (ENSCCRG00000073693) GAS2 (ENSCCRG00000079326) slc17a6a (ENSCCRG00000001345) ANO5 (ENSCCRG00000075447) ENSCCRG00000033108 ENSCCRG00000077396 ENSCCRG00000067925 #32 ENSCCRG00000061204 ##31 ENSCCRG00000058264 ENSCCRG00000067526 ENSCCRG00000012743 #14 ENSCCRG00000060232 #25 ENSCCRG00000059679 ##36 ENSCCRG00000041145 ENSCCRG00000017405 ENSCCRG00000059243 ENSCCRG00000071273 ENSCCRG00000033138 ENSCCRG00000079081 #37 ENSCCRG00000068098 ##36 ENSCCRG00000061770 #19 ENSCCRG00000057144 ##36 Common carp reference MODERN SPECIES zgc:101810 (ENSCCRG00000048389) ENSCCRG00000082846 actn3b (ENSCCRG00000047390) rbm14b (ENSCCRG00000047280) prkd4 (ENSCCRG00000047278) ENSCCRG00000075328 ENSCCRG00000060679 sf3b2 (ENSCCRG00000034663) capn1 (ENSCCRG00000005160) ENSCCRG00000056358 pnp5a (ENSCCRG00000061402) ENSCCRG00000015316 ENSCCRG00000064436 ENSCCRG00000066987 #37 ENSCCRG00000078728 ##36 ENSCCRG00000079165 #32 ENSCCRG00000015735 ENSCCRG00000052853 ENSCCRG00000080209 ENSCCRG00000036718 ENSCCRG00000061125 ENSCCRG00000052857 ##31 ENSCCRG00000059935 ENSCCRG00000062915 ENSCCRG00000042282 ENSCCRG00000080118 ENSCCRG00000071115 vangl2 (ENSCCRG00000024537) ENSCCRG00000076075 ENSCCRG00000076192 ENSCCRG00000077941 Common carp reference MODERN SPECIES ENSCCRG00000058256 #37 ENSCCRG00000054678 #37 ENSCCRG00000032940 ENSCCRG00000058818 PTPRD (ENSCCRG00000049254) ENSCCRG00000065752 TYRP1 (ENSCCRG00000047321) LURAP1L (ENSCCRG00000082720) ENSCCRG00000052968 ##36 ENSCCRG00000064868 ##36 ENSCCRG00000062149 ENSCCRG00000004814 ENSCCRG00000062287 #25 ENSCCRG00000053465 #37 ENSCCRG00000059347 #31 ENSCCRG00000068119 #32 ENSCCRG00000060112 #31 ENSCCRG00000055940 ENSCCRG00000079776 ENSCCRG00000063710 #26 ENSCCRG00000062278 ##36 casq1b (ENSCCRG00000019310) ENSCCRG00000063320 ENSCCRG00000003172 ENSCCRG00000045003 ENSCCRG00000045009 ENSCCRG00000061087 ENSCCRG00000038245 ENSCCRG00000019384 ENSCCRG00000000759 ENSCCRG00000048131 Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 17 vps4a (ENSDARG00000030114) cdk10 (ENSDARG00000034256) ENSDARG00000097374 ENSDARG00000075513 FLNC (ENSDARG00000018566) ENSDARG00000091728 ##36 ENSDARG00000111753 ENSDARG00000113800 ##31 ENSDARG00000109370 ##36 ENSDARG00000075508 #37 hist2h3c (ENSDARG00000094154) #32 ENSDARG00000112561 ##36 ENSDARG00000113205 zgc:112234 (ENSDARG00000111934) ##36 ENSDARG00000110841 #37 zgc:113983 (ENSDARG00000068941) #32 ENSDARG00000111648 ##31 zgc:165555 (ENSDARG00000112954) ENSDARG00000111964 ##36 ENSDARG00000012073 zgc:162611 (ENSDARG00000092846) ENSDARG00000112647 #25 ENSDARG00000091905 #37 zgc:194989 (ENSDARG00000114405) ##36 ENSDARG00000115281 ENSDARG00000114500 #25 ENSDARG00000112840 ##31 ENSDARG00000114195 ##36 ENSDARG00000114534 ENSDARG00000114370 #32 ENSDARG00000115766 #37 Zebrafish MODERN SPECIES 22 GAL3ST3 (ENSDARG00000073728) ccs (ENSDARG00000092003) actn3b (ENSDARG00000001431) rbm14b (ENSDARG00000103834) CCS (ENSDARG00000116246) ENSDARG00000113916 prkd4 (ENSDARG00000104153) sf3b2 (ENSDARG00000018049) capn1 (ENSDARG00000045199) pnp5a (ENSDARG00000078619) KCNJ10 (ENSDARG00000090815) ENSDARG00000105438 ENSDARG00000074818 zgc:110425 (ENSDARG00000058479) #37 ENSDARG00000105444 ##31 ENSDARG00000105359 #32 zgc:112234 (ENSDARG00000105507) ##36 hist1h2a2 (ENSDARG00000103015) ##31 ENSDARG00000105409 zgc:112234 (ENSDARG00000105393) ##36 zgc:154164 (ENSDARG00000105355) ENSDARG00000074012 ENSDARG00000098595 ##31 ENSDARG00000105484 #25 zgc:112234 (ENSDARG00000105483) ##36 ENSDARG00000105366 ##31 ENSDARG00000105482 ENSDARG00000105350 #37 ENSDARG00000105478 ##31 zgc:173552 (ENSDARG00000105345) ##35 zgc:112234 (ENSDARG00000105340) ##36 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 22 ENSDARG00000113763 si:ch73-368j24.12 (ENSDARG00000105502) ENSDARG00000105418 #25 ENSDARG00000105471 ##28 ENSDARG00000058564 ENSDARG00000086552 ##31 ENSDARG00000105374 #25 zgc:112234 (ENSDARG00000105414) ##36 ENSDARG00000105400 ##31 ENSDARG00000105318 zgc:112234 (ENSDARG00000105468) ##36 ENSDARG00000100279 ##31 ENSDARG00000105382 si:ch73-368j24.8 (ENSDARG00000104588) ##36 ENSDARG00000105430 #37 H3C15 (ENSDARG00000105459) #32 ENSDARG00000105353 ENSDARG00000105379 ENSDARG00000105372 ENSDARG00000015607 ENSDARG00000105473 ENSDARG00000105384 ##36 hist2h3ca1 (ENSDARG00000105508) #25 si:dkey-23a13.20 (ENSDARG00000100906) ##31 zgc:163040 (ENSDARG00000099920) ENSDARG00000101720 #25 si:dkey-23a13.17 (ENSDARG00000105328) #37 si:dkey-23a13.16 (ENSDARG00000102806) ##36 ENSDARG00000101249 hist1h2a7 (ENSDARG00000099123) ##31 ENSDARG00000100259 ##36 Zebrafish MODERN SPECIES 22 vangl2 (ENSDARG00000027397) ENSDARG00000052482 MYADM (ENSDARG00000086815) ENSDARG00000092823 ENSDARG00000090099 ENSDARG00000093835 ENSDARG00000095133 ENSDARG00000094374 ENSDARG00000028912 ENSDARG00000095068 ENSDARG00000105455 ENSDARG00000093987 ENSDARG00000105470 dusp19b (ENSDARG00000045200) hist1h2a11 (ENSDARG00000088686) ##31 ENSDARG00000103819 #32 zgc:112234 (ENSDARG00000099514) ##36 ENSDARG00000105314 ##31 ENSDARG00000105352 ENSDARG00000105397 ##36 ENSDARG00000105431 ENSDARG00000098970 #25 ENSDARG00000029838 ENSDARG00000105342 ENSDARG00000100259 ##36 hist1h2a7 (ENSDARG00000099123) ##31 ENSDARG00000101249 si:dkey-23a13.16 (ENSDARG00000102806) ##36 si:dkey-23a13.17 (ENSDARG00000105328) #37 ENSDARG00000101720 #25 zgc:163040 (ENSDARG00000099920) Zebrafish MODERN SPECIES 17 ENSDARG00000114125 ##36 ENSDARG00000109755 ##31 ENSDARG00000110035 ENSDARG00000032637 #37 ENSDARG00000113481 ##31 ENSDARG00000112375 #32 ENSDARG00000111247 zgc:173585 (ENSDARG00000089039) ##36 ENSDARG00000112967 #25 ENSDARG00000112593 ##31 ENSDARG00000116654 ##36 ENSDARG00000113399 ##31 ENSDARG00000110812 ENSDARG00000115938 ##36 ENSDARG00000115766 #37 ENSDARG00000114370 #32 ENSDARG00000114534 ENSDARG00000114195 ##36 ENSDARG00000112840 ##31 ENSDARG00000114500 #25 ENSDARG00000115281 zgc:194989 (ENSDARG00000114405) ##36 ENSDARG00000091905 #37 ENSDARG00000112647 #25 zgc:162611 (ENSDARG00000092846) ENSDARG00000012073 ENSDARG00000111964 ##36 zgc:165555 (ENSDARG00000112954) ENSDARG00000111648 ##31 zgc:113983 (ENSDARG00000068941) #32 ENSDARG00000110841 #37 Zebrafish MODERN SPECIES 17 gabarapl2 (ENSDARG00000027200) tmem231 (ENSDARG00000042272) chst6 (ENSDARG00000061357) spire2 (ENSDARG00000003084) SNTB2 (ENSDARG00000051763) vps4a (ENSDARG00000030114) cdk10 (ENSDARG00000034256) ENSDARG00000097374 ENSDARG00000075513 FLNC (ENSDARG00000018566) ENSDARG00000091728 ##36 ENSDARG00000111753 ENSDARG00000113800 ##31 ENSDARG00000109370 ##36 ENSDARG00000075508 #37 hist2h3c (ENSDARG00000094154) #32 ENSDARG00000112561 ##36 ENSDARG00000113205 zgc:112234 (ENSDARG00000111934) ##36 ENSDARG00000110841 #37 zgc:113983 (ENSDARG00000068941) #32 ENSDARG00000111648 ##31 zgc:165555 (ENSDARG00000112954) ENSDARG00000111964 ##36 ENSDARG00000012073 zgc:162611 (ENSDARG00000092846) ENSDARG00000112647 #25 ENSDARG00000091905 #37 zgc:194989 (ENSDARG00000114405) ##36 ENSDARG00000115281 ENSDARG00000114500 #25 Zebrafish MODERN SPECIES 17 GAS2 (ENSDARG00000001259) fancf (ENSDARG00000019250) slc17a6a (ENSDARG00000001127) ANO5 (ENSDARG00000015731) ano9a (ENSDARG00000078941) ##36 ENSDARG00000076320 zgc:153405 (ENSDARG00000096992) #37 ENSDARG00000114133 ##31 zgc:113984 (ENSDARG00000115644) #25 si:dkey-261m9.17 (ENSDARG00000111165) ENSDARG00000114125 ##36 ENSDARG00000109755 ##31 ENSDARG00000110035 ENSDARG00000032637 #37 ENSDARG00000113481 ##31 ENSDARG00000112375 #32 ENSDARG00000111247 zgc:173585 (ENSDARG00000089039) ##36 ENSDARG00000112967 #25 ENSDARG00000112593 ##31 ENSDARG00000116654 ##36 ENSDARG00000113399 ##31 ENSDARG00000110812 ENSDARG00000115938 ##36 ENSDARG00000115766 #37 ENSDARG00000114370 #32 ENSDARG00000114534 ENSDARG00000114195 ##36 ENSDARG00000112840 ##31 ENSDARG00000114500 #25 ENSDARG00000115281 Zebrafish MODERN SPECIES 17 mphosph6 (ENSDARG00000093007) SNX20 (ENSDARG00000045554) SALL1 (ENSDARG00000075891) RBL2 (ENSDARG00000045636) rpgrip1l (ENSDARG00000051754) irx5b (ENSDARG00000074070) amfra (ENSDARG00000020218) ENSDARG00000051729 DUS2 (ENSDARG00000077607) SLC7A10 (ENSDARG00000051730) ENSDARG00000116673 faap24 (ENSDARG00000051731) bmb (ENSDARG00000096603) ENSDARG00000116781 ENSDARG00000110809 ##31 ENSDARG00000114169 #32 ENSDARG00000111494 ENSDARG00000086591 ##36 ENSDARG00000112528 zgc:110216 (ENSDARG00000077456) #37 hist1h2a4 (ENSDARG00000051736) ##31 zgc:173552 (ENSDARG00000051737) ##35 ENSDARG00000110152 ENSDARG00000109737 ##36 ENSDARG00000109458 ##31 ENSDARG00000115054 ENSDARG00000051735 #37 ENSDARG00000111536 ##31 zgc:173552 (ENSDARG00000112131) ##35 ENSDARG00000112491 ENSDARG00000114895 ##36 Characiphysae ANCESTRAL SPECIES 473 ENSGT01020000230360.c.b.a.a.a.a.a.d.h.b ##31 ENSGT01100000263559.B #32 Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 325 H2A (ENSIPUG00000012097) ##31 ENSIPUG00000012107 #32 Channel catfish MODERN SPECIES 3 ENSIPUG00000003595 ##28 ENSIPUG00000003603 #10 ENSIPUG00000003607 ##36 ENSIPUG00000003612 #37 H2A (ENSIPUG00000003622) ##31 ENSIPUG00000003626 #32 ENSIPUG00000003634 ENSIPUG00000003645 emc7b (ENSIPUG00000003653) chd6 (ENSIPUG00000003692) rbl1 (ENSIPUG00000003765) Pigu (ENSIPUG00000003857) OSGIN2 (ENSIPUG00000003905) ENSIPUG00000003924 atg3 (ENSIPUG00000003956) atp5e (ENSIPUG00000004082) cyc1 (ENSIPUG00000004093) ergic3 (ENSIPUG00000004110) romo1 (ENSIPUG00000004166) mych (ENSIPUG00000004172) ENSIPUG00000004179 Channel catfish MODERN SPECIES 479 ENSIPUG00000001270 #32 Channel catfish MODERN SPECIES 179 ENSIPUG00000009334 #32 Channel catfish MODERN SPECIES 396 H2A (ENSIPUG00000012863) ##31 ENSIPUG00000012870 #32 Clupeiformes ANCESTRAL SPECIES 759 ENSGT00990000203553.c.a.a.b.b.a.b ##28 ENSGT01020000230360.c.b.a.a.a.a.a.d ##31 ENSGT01100000263559.B #32 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 16 ENSCHAG00000004899 #37 ENSCHAG00000004929 ENSCHAG00000004955 ENSCHAG00000004984 ENSCHAG00000005004 ENSCHAG00000005045 ENSCHAG00000005075 ENSCHAG00000002567 ENSCHAG00000002659 ENSCHAG00000002690 ENSCHAG00000002717 ENSCHAG00000002844 ENSCHAG00000002901 ##31 ENSCHAG00000002931 ##28 ENSCHAG00000002955 #37 ENSCHAG00000003002 #32 ENSCHAG00000003031 ##31 ENSCHAG00000003039 #35 ENSCHAG00000003073 ##36 ENSCHAG00000003121 ##28 ENSCHAG00000003133 capn8 (ENSCHAG00000003252) ENSCHAG00000004617 tspan34 (ENSCHAG00000009226) ENSCHAG00000009236 ENSCHAG00000009320 ENSCHAG00000009399 ENSCHAG00000009424 dand5 (ENSCHAG00000009432) rad23aa (ENSCHAG00000009450) ENSCHAG00000009468 Atlantic herring MODERN SPECIES 16 SPTBN1 (ENSCHAG00000024710) ACYP2 (ENSCHAG00000027126) ENSCHAG00000027129 sult6b1 (ENSCHAG00000027137) ENSCHAG00000027151 ENSCHAG00000027153 ENSCHAG00000027158 vipb (ENSCHAG00000002591) SLC29A1 (ENSCHAG00000002693) TMEM63B (ENSCHAG00000003353) ENSCHAG00000005624 elof1 (ENSCHAG00000005651) CNN1 (ENSCHAG00000005679) ENSCHAG00000005683 ##28 ENSCHAG00000005703 ##31 ENSCHAG00000005709 #32 ENSCHAG00000005715 ##36 ENSCHAG00000005727 ##28 ENSCHAG00000005744 ##31 ENSCHAG00000005750 #37 ENSCHAG00000005771 ##36 ENSCHAG00000005789 ENSCHAG00000005844 ##28 ENSCHAG00000005867 #8 ENSCHAG00000005885 ENSCHAG00000005934 ENSCHAG00000005959 ENSCHAG00000006141 ENSCHAG00000006176 ENSCHAG00000006189 ENSCHAG00000006346