Gnathostomata ANCESTRAL SPECIES 345 ENSGT01060000248528.b #21 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A ##22 ENSGT00940000153118 ENSGT01100000263506.a ENSGT00990000203553.c.a.b ENSGT01020000230360.d ##19 Euteleostomi ANCESTRAL SPECIES 237 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263506.a ENSGT01100000263567.a.a ##27 ENSGT00940000155501.b ENSGT00390000009083 ENSGT01020000230360.c.b.a.b.b.d #19 ENSGT01100000263474.a.a ##20 ENSGT01100000263514.A.e.a ENSGT01100000263474.a.b.b #28 ENSGT00950000183089 #18 ENSGT01100000263474.a.b.a #20 ENSGT00990000203553.c.a.a.a.b Actinopterygii ANCESTRAL SPECIES 663 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B #22 Reedfish DUPLICATION Reedfish MODERN SPECIES 1 gpx7 (ENSECRG00000007499) #7 TUT4 (ENSECRG00000007462) #8 prpf38a (ENSECRG00000007442) #9 orc1 (ENSECRG00000007422) #10 mpl (ENSECRG00000007403) #11 tie1 (ENSECRG00000007369) #12 si:ch73-185c24.2 (ENSECRG00000007336) #13 ap1m3 (ENSECRG00000007293) #14 tmem125b (ENSECRG00000007272) #15 CFAP57 (ENSECRG00000007244) #16 ENSECRG00000007224 #17 ENSECRG00000007219 #18 ENSECRG00000007209 #19 ENSECRG00000007202 #20 ENSECRG00000007194 #21 hist2h3c (ENSECRG00000021895) #22 ENSECRG00000021890 #23 ENSECRG00000021884 #24 ENSECRG00000021881 #25 ENSECRG00000021872 #26 ENSECRG00000021865 #27 ENSECRG00000021864 #28 ENSECRG00000021857 #29 ENSECRG00000021854 #30 ENSECRG00000021847 #31 ENSECRG00000021842 #32 ENSECRG00000021834 #33 ENSECRG00000021825 #34 ENSECRG00000021818 #35 ENSECRG00000021811 #36 ENSECRG00000021804 #37 Reedfish MODERN SPECIES ENSECRG00000001175 ENSECRG00000001156 ENSECRG00000001106 ENSECRG00000001058 ENSECRG00000001037 ENSECRG00000001025 ENSECRG00000001009 ENSECRG00000000992 ENSECRG00000000972 ENSECRG00000000965 ENSECRG00000000952 ##21 ENSECRG00000000939 ##20 ENSECRG00000000926 ##19 ENSECRG00000000917 ##18 ENSECRG00000000905 ##22 ENSECRG00000000892 ##22 ENSECRG00000000877 ##18 ENSECRG00000000862 ##19 ENSECRG00000000854 ##20 ENSECRG00000000846 ##21 ENSECRG00000000832 ##22 ENSECRG00000000819 ##18 ENSECRG00000000806 ##19 ENSECRG00000000798 ##20 ENSECRG00000000788 ##21 ENSECRG00000000782 ##20 ENSECRG00000000768 ENSECRG00000000752 ##18 ENSECRG00000000746 ##20 ENSECRG00000000738 ##19 ENSECRG00000000731 ##20 Reedfish MODERN SPECIES ENSECRG00000000438 ##20 ENSECRG00000000444 ##21 ENSECRG00000000451 ##20 ENSECRG00000000456 ##21 ENSECRG00000000463 ##20 ENSECRG00000000470 ENSECRG00000000476 ##22 ENSECRG00000000488 ##20 ENSECRG00000000494 ##19 ENSECRG00000000499 ##20 ENSECRG00000000509 ENSECRG00000000526 ENSECRG00000000537 ENSECRG00000000547 ##19 ENSECRG00000000557 ##21 ENSECRG00000000565 ##22 ENSECRG00000000576 ENSECRG00000000585 ##21 ENSECRG00000000595 ENSECRG00000000606 ##18 ENSECRG00000000618 ##19 ENSECRG00000000624 ##20 ENSECRG00000000642 ENSECRG00000000667 ENSECRG00000000677 ##19 ENSECRG00000000688 ##20 ENSECRG00000000697 ENSECRG00000000718 ##27 ENSECRG00000000704 ##27 ENSECRG00000000731 ##20 ENSECRG00000000738 ##19 Reedfish MODERN SPECIES ENSECRG00000001025 ENSECRG00000001009 ENSECRG00000000992 ENSECRG00000000972 ENSECRG00000000965 ENSECRG00000000952 ##21 ENSECRG00000000939 ##20 ENSECRG00000000926 ##19 ENSECRG00000000917 ##18 ENSECRG00000000905 ##22 ENSECRG00000000892 ##22 ENSECRG00000000877 ##18 ENSECRG00000000862 ##19 ENSECRG00000000854 ##20 ENSECRG00000000846 ##21 ENSECRG00000000832 ##22 ENSECRG00000000819 ##18 ENSECRG00000000806 ##19 ENSECRG00000000798 ##20 ENSECRG00000000788 ##21 ENSECRG00000000782 ##20 ENSECRG00000000768 ENSECRG00000000752 ##18 ENSECRG00000000746 ##20 ENSECRG00000000738 ##19 ENSECRG00000000731 ##20 ENSECRG00000000704 ##27 ENSECRG00000000718 ##27 ENSECRG00000000697 ENSECRG00000000688 ##20 ENSECRG00000000677 ##19 Reedfish MODERN SPECIES 1 UBE2U (ENSECRG00000009018) ROR1 (ENSECRG00000008992) PGM1 (ENSECRG00000008950) efcab7 (ENSECRG00000008920) alg6 (ENSECRG00000008901) foxd3 (ENSECRG00000008882) atg4c (ENSECRG00000008865) angptl3 (ENSECRG00000008852) DOCK7 (ENSECRG00000008573) usp1 (ENSECRG00000008474) KANK4 (ENSECRG00000008452) lrp8 (ENSECRG00000008063) ENSECRG00000007997 cfap144 (ENSECRG00000007989) ebna1bp2 (ENSECRG00000007977) ENSECRG00000007972 ##22 ENSECRG00000007965 ##18 ENSECRG00000007958 ##19 ENSECRG00000007951 ##20 ENSECRG00000007945 ##21 ENSECRG00000007940 ##20 ENSECRG00000007931 ##19 ENSECRG00000007925 ##19 zgc:114041 (ENSECRG00000007915) ENSECRG00000007904 ENSECRG00000007896 ##18 ENSECRG00000007890 ##27 ENSECRG00000007876 ##19 ENSECRG00000007870 ##20 ENSECRG00000007863 ##21 ENSECRG00000007856 ##22 Reedfish DUPLICATION Reedfish MODERN SPECIES ENSECRG00000000738 ##19 ENSECRG00000000746 ##20 ENSECRG00000000752 ##18 ENSECRG00000000768 ENSECRG00000000782 ##20 ENSECRG00000000788 ##21 ENSECRG00000000798 ##20 ENSECRG00000000806 ##19 ENSECRG00000000819 ##18 ENSECRG00000000832 ##22 ENSECRG00000000846 ##21 ENSECRG00000000854 ##20 ENSECRG00000000862 ##19 ENSECRG00000000877 ##18 ENSECRG00000000892 ##22 ENSECRG00000000905 ##22 ENSECRG00000000917 ##18 ENSECRG00000000926 ##19 ENSECRG00000000939 ##20 ENSECRG00000000952 ##21 ENSECRG00000000965 ENSECRG00000000972 ENSECRG00000000992 ENSECRG00000001009 ENSECRG00000001025 ENSECRG00000001037 ENSECRG00000001058 ENSECRG00000001106 ENSECRG00000001156 ENSECRG00000001175 ENSECRG00000001188 Reedfish MODERN SPECIES 1 SSH3 (ENSECRG00000010208) mrpl18 (ENSECRG00000010202) ENSECRG00000010185 ndufs8a (ENSECRG00000010160) TBC1D10C (ENSECRG00000010142) PPP1CA (ENSECRG00000010107) RAD9A (ENSECRG00000010077) ENSECRG00000010058 ENSECRG00000010025 CLCF1 (ENSECRG00000010003) ENSECRG00000009991 P2RX3 (ENSECRG00000009959) ssrp1a (ENSECRG00000009932) ENSECRG00000009883 tmem17 (ENSECRG00000009854) ENSECRG00000009841 ##22 ENSECRG00000009838 ##21 ENSECRG00000009834 ##27 ENSECRG00000009828 ##19 ENSECRG00000009824 ##20 ENSECRG00000009819 ##21 ENSECRG00000009814 ##19 ENSECRG00000009812 ##20 ENSECRG00000009804 ##21 ENSECRG00000009797 ENSECRG00000009788 ENSECRG00000009772 clp1 (ENSECRG00000009743) zdhhc5a (ENSECRG00000009724) ENSECRG00000009716 med19a (ENSECRG00000009712) Neopterygii ANCESTRAL SPECIES 527 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B #22 Osteoglossocephalai ANCESTRAL SPECIES 442 ENSGT01100000263567.a.b.b #32 ENSGT01020000230360.c.b.a.a.a.a.b.b #25 ENSGT00990000203553.c.a.a.a.b ENSGT01100000263474.a.b.a.b.a ##20 ENSGT00950000183089.c.a #18 ENSGT01100000263559.B #22 Osteoglossiformes ANCESTRAL SPECIES ENSGT01100000263559.B #22 Asian bonytongue MODERN SPECIES 20 myh7ba (ENSSFOG00015002309) TRPC4AP (ENSSFOG00015002204) SLA2 (ENSSFOG00015002190) ndrg3a (ENSSFOG00015002131) ENSSFOG00015025052 arhgap46a (ENSSFOG00015030332) CLASP1 (ENSSFOG00015001775) SAMD9 (ENSSFOG00015001758) GLI2 (ENSSFOG00015001470) inhbb (ENSSFOG00015029754) RALB (ENSSFOG00015031572) epb41l5 (ENSSFOG00015001354) DAAM1 (ENSSFOG00015029716) L3HYPDH (ENSSFOG00015027099) ENSSFOG00015029977 ##19 hist2h3c (ENSSFOG00015018134) #22 WDR20 (ENSSFOG00015001045) hsp90aa1.2 (ENSSFOG00015000997) ENSSFOG00015000955 si:dkey-174m14.3 (ENSSFOG00015026593) SLC25A29 (ENSSFOG00015000907) FKBP3 (ENSSFOG00015000874) faua (ENSSFOG00015000850) arf6a (ENSSFOG00015000666) naa30 (ENSSFOG00015000656) ENSSFOG00015024990 ENSSFOG00015025570 #28 ENSSFOG00015025209 ENTPD5 (ENSSFOG00015000485) rps29 (ENSSFOG00015000394) wdr21 (ENSSFOG00015000375) Clupeocephala ANCESTRAL SPECIES 535 ENSGT01100000263474.a.b.a.b.a.c.a.b.b.a.a.a.a ##20 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b #28 ENSGT01100000263559.B #22 ENSGT00940000153092 Otomorpha ANCESTRAL SPECIES 494 ENSGT00990000203553.c.a.a.b.b.a.b ENSGT01020000230360.c.b.a.a.a.a.a.d ##19 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263474.a.b.a.b.a.d ##20 ENSGT00950000183089.c.a #18 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b ##19 ENSGT01100000263514.A.f ENSGT01020000230360.c.b.a.a.b #34 Otophysi ANCESTRAL SPECIES 389 ENSGT01020000230360.c.b.a.a.a.a.a.d.i ##19 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263474.a.b.a.b.a.d ##20 ENSGT00950000183089.c.a #18 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b ##19 ENSGT01100000263514.A.f ENSGT01020000230360.c.b.a.a.b #34 Cyprinoidei ANCESTRAL SPECIES 191 ENSGT00940000159147.b.b ENSGT00950000182991.A.b.b ENSGT00990000203615.b.a.a.a.a.g.a.b ENSGT00940000166094 ENSGT00940000162700.f ENSGT00950000183089.c.a.m.a.b #18 ENSGT01100000263559.B #22 ENSGT01060000248528.b.n #21 ENSGT01100000263474.a.b.a.b.a.d ##20 ENSGT00950000183089.c.a.m.a.a #18 ENSGT01100000263559.A.db ##22 ENSGT01060000248528.b.m.b #21 ENSGT01020000230360.c.b.a.a.a.a.a.d.i ##19 ENSGT00940000156472.c Cyprininae ANCESTRAL SPECIES 1551 ENSGT00950000183089.c.a.m.a.b.a.b #18 ENSGT01100000263559.B #22 Cyprininae_a ANCESTRAL SPECIES 1176 ENSGT00950000183089.c.a.m.a.b.a.b #18 ENSGT01100000263559.B #22 Golden-line barbel MODERN SPECIES 3741 ENSSGRG00000004848 ##19 H3C15 (ENSSGRG00000004855) #22 ENSSGRG00000004875 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 37 ENSCCRG00000054426 ENSCCRG00000011168 lrrk2 (ENSCCRG00000023338) ENSCCRG00000023607 spi1a (ENSCCRG00000067414) ENSCCRG00000023629 FIBIN (ENSCCRG00000064565) slc5a12 (ENSCCRG00000001602) ANO3 (ENSCCRG00000001456) svip (ENSCCRG00000073693) GAS2 (ENSCCRG00000079326) slc17a6a (ENSCCRG00000001345) ANO5 (ENSCCRG00000075447) ENSCCRG00000033108 ENSCCRG00000077396 ENSCCRG00000067925 #22 ENSCCRG00000061204 ##19 ENSCCRG00000058264 ENSCCRG00000067526 ENSCCRG00000012743 ENSCCRG00000060232 ##22 ENSCCRG00000059679 ##20 ENSCCRG00000041145 ENSCCRG00000017405 ENSCCRG00000059243 ENSCCRG00000071273 ENSCCRG00000033138 ENSCCRG00000079081 #18 ENSCCRG00000068098 ##20 ENSCCRG00000061770 ENSCCRG00000057144 ##20 Common carp reference MODERN SPECIES zgc:101810 (ENSCCRG00000048389) ENSCCRG00000082846 actn3b (ENSCCRG00000047390) rbm14b (ENSCCRG00000047280) prkd4 (ENSCCRG00000047278) ENSCCRG00000075328 ENSCCRG00000060679 sf3b2 (ENSCCRG00000034663) capn1 (ENSCCRG00000005160) ENSCCRG00000056358 pnp5a (ENSCCRG00000061402) ENSCCRG00000015316 ENSCCRG00000064436 ENSCCRG00000066987 #18 ENSCCRG00000078728 ##20 ENSCCRG00000079165 #22 ENSCCRG00000015735 ENSCCRG00000052853 ENSCCRG00000080209 ENSCCRG00000036718 ENSCCRG00000061125 ENSCCRG00000052857 ##19 ENSCCRG00000059935 ENSCCRG00000062915 ENSCCRG00000042282 ENSCCRG00000080118 ENSCCRG00000071115 vangl2 (ENSCCRG00000024537) ENSCCRG00000076075 ENSCCRG00000076192 ENSCCRG00000077941 Common carp reference MODERN SPECIES ENSCCRG00000058256 #18 ENSCCRG00000054678 #18 ENSCCRG00000032940 ENSCCRG00000058818 PTPRD (ENSCCRG00000049254) ENSCCRG00000065752 TYRP1 (ENSCCRG00000047321) LURAP1L (ENSCCRG00000082720) ENSCCRG00000052968 ##20 ENSCCRG00000064868 ##20 ENSCCRG00000062149 ENSCCRG00000004814 ENSCCRG00000062287 ##22 ENSCCRG00000053465 #18 ENSCCRG00000059347 ##19 ENSCCRG00000068119 #22 ENSCCRG00000060112 ##19 ENSCCRG00000055940 ENSCCRG00000079776 ENSCCRG00000063710 ENSCCRG00000062278 ##20 casq1b (ENSCCRG00000019310) ENSCCRG00000063320 ENSCCRG00000003172 ENSCCRG00000045003 ENSCCRG00000045009 ENSCCRG00000061087 ENSCCRG00000038245 ENSCCRG00000019384 ENSCCRG00000000759 ENSCCRG00000048131 Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 17 vps4a (ENSDARG00000030114) cdk10 (ENSDARG00000034256) ENSDARG00000097374 ENSDARG00000075513 FLNC (ENSDARG00000018566) ENSDARG00000091728 ##20 ENSDARG00000111753 #21 ENSDARG00000113800 ##19 ENSDARG00000109370 ##20 ENSDARG00000075508 #18 hist2h3c (ENSDARG00000094154) #22 ENSDARG00000112561 ##20 ENSDARG00000113205 #21 zgc:112234 (ENSDARG00000111934) ##20 ENSDARG00000110841 #18 zgc:113983 (ENSDARG00000068941) #22 ENSDARG00000111648 ##19 zgc:165555 (ENSDARG00000112954) #21 ENSDARG00000111964 ##20 ENSDARG00000012073 zgc:162611 (ENSDARG00000092846) ENSDARG00000112647 ##22 ENSDARG00000091905 #18 zgc:194989 (ENSDARG00000114405) ##20 ENSDARG00000115281 #21 ENSDARG00000114500 ##22 ENSDARG00000112840 ##19 ENSDARG00000114195 ##20 ENSDARG00000114534 #21 ENSDARG00000114370 #22 ENSDARG00000115766 #18 Zebrafish MODERN SPECIES 22 GAL3ST3 (ENSDARG00000073728) ccs (ENSDARG00000092003) actn3b (ENSDARG00000001431) rbm14b (ENSDARG00000103834) CCS (ENSDARG00000116246) ENSDARG00000113916 prkd4 (ENSDARG00000104153) sf3b2 (ENSDARG00000018049) capn1 (ENSDARG00000045199) pnp5a (ENSDARG00000078619) KCNJ10 (ENSDARG00000090815) ENSDARG00000105438 ENSDARG00000074818 zgc:110425 (ENSDARG00000058479) #18 ENSDARG00000105444 ##19 ENSDARG00000105359 #22 zgc:112234 (ENSDARG00000105507) ##20 hist1h2a2 (ENSDARG00000103015) ##19 ENSDARG00000105409 #21 zgc:112234 (ENSDARG00000105393) ##20 zgc:154164 (ENSDARG00000105355) #21 ENSDARG00000074012 ENSDARG00000098595 ##19 ENSDARG00000105484 ##22 zgc:112234 (ENSDARG00000105483) ##20 ENSDARG00000105366 ##19 ENSDARG00000105482 #21 ENSDARG00000105350 #18 ENSDARG00000105478 ##19 zgc:173552 (ENSDARG00000105345) #32 zgc:112234 (ENSDARG00000105340) ##20 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 22 ENSDARG00000113763 si:ch73-368j24.12 (ENSDARG00000105502) ENSDARG00000105418 ##22 ENSDARG00000105471 ENSDARG00000058564 ENSDARG00000086552 ##19 ENSDARG00000105374 ##22 zgc:112234 (ENSDARG00000105414) ##20 ENSDARG00000105400 ##19 ENSDARG00000105318 #21 zgc:112234 (ENSDARG00000105468) ##20 ENSDARG00000100279 ##19 ENSDARG00000105382 #21 si:ch73-368j24.8 (ENSDARG00000104588) ##20 ENSDARG00000105430 #18 H3C15 (ENSDARG00000105459) #22 ENSDARG00000105353 #21 ENSDARG00000105379 ENSDARG00000105372 ENSDARG00000015607 ENSDARG00000105473 ENSDARG00000105384 ##20 hist2h3ca1 (ENSDARG00000105508) ##22 si:dkey-23a13.20 (ENSDARG00000100906) ##19 zgc:163040 (ENSDARG00000099920) #21 ENSDARG00000101720 ##22 si:dkey-23a13.17 (ENSDARG00000105328) #18 si:dkey-23a13.16 (ENSDARG00000102806) ##20 ENSDARG00000101249 #21 hist1h2a7 (ENSDARG00000099123) ##19 ENSDARG00000100259 ##20 Zebrafish MODERN SPECIES 22 vangl2 (ENSDARG00000027397) ENSDARG00000052482 MYADM (ENSDARG00000086815) ENSDARG00000092823 ENSDARG00000090099 ENSDARG00000093835 ENSDARG00000095133 ENSDARG00000094374 ENSDARG00000028912 ENSDARG00000095068 ENSDARG00000105455 ENSDARG00000093987 ENSDARG00000105470 dusp19b (ENSDARG00000045200) hist1h2a11 (ENSDARG00000088686) ##19 ENSDARG00000103819 #22 zgc:112234 (ENSDARG00000099514) ##20 ENSDARG00000105314 ##19 ENSDARG00000105352 #21 ENSDARG00000105397 ##20 ENSDARG00000105431 ENSDARG00000098970 ##22 ENSDARG00000029838 ENSDARG00000105342 ENSDARG00000100259 ##20 hist1h2a7 (ENSDARG00000099123) ##19 ENSDARG00000101249 #21 si:dkey-23a13.16 (ENSDARG00000102806) ##20 si:dkey-23a13.17 (ENSDARG00000105328) #18 ENSDARG00000101720 ##22 zgc:163040 (ENSDARG00000099920) #21 Zebrafish MODERN SPECIES 17 ENSDARG00000114125 ##20 ENSDARG00000109755 ##19 ENSDARG00000110035 #21 ENSDARG00000032637 #18 ENSDARG00000113481 #25 ENSDARG00000112375 #22 ENSDARG00000111247 #21 zgc:173585 (ENSDARG00000089039) ##20 ENSDARG00000112967 ##22 ENSDARG00000112593 ##19 ENSDARG00000116654 ##20 ENSDARG00000113399 ##19 ENSDARG00000110812 #21 ENSDARG00000115938 ##20 ENSDARG00000115766 #18 ENSDARG00000114370 #22 ENSDARG00000114534 #21 ENSDARG00000114195 ##20 ENSDARG00000112840 ##19 ENSDARG00000114500 ##22 ENSDARG00000115281 #21 zgc:194989 (ENSDARG00000114405) ##20 ENSDARG00000091905 #18 ENSDARG00000112647 ##22 zgc:162611 (ENSDARG00000092846) ENSDARG00000012073 ENSDARG00000111964 ##20 zgc:165555 (ENSDARG00000112954) #21 ENSDARG00000111648 ##19 zgc:113983 (ENSDARG00000068941) #22 ENSDARG00000110841 #18 Zebrafish MODERN SPECIES 17 gabarapl2 (ENSDARG00000027200) tmem231 (ENSDARG00000042272) chst6 (ENSDARG00000061357) spire2 (ENSDARG00000003084) SNTB2 (ENSDARG00000051763) vps4a (ENSDARG00000030114) cdk10 (ENSDARG00000034256) ENSDARG00000097374 ENSDARG00000075513 FLNC (ENSDARG00000018566) ENSDARG00000091728 ##20 ENSDARG00000111753 #21 ENSDARG00000113800 ##19 ENSDARG00000109370 ##20 ENSDARG00000075508 #18 hist2h3c (ENSDARG00000094154) #22 ENSDARG00000112561 ##20 ENSDARG00000113205 #21 zgc:112234 (ENSDARG00000111934) ##20 ENSDARG00000110841 #18 zgc:113983 (ENSDARG00000068941) #22 ENSDARG00000111648 ##19 zgc:165555 (ENSDARG00000112954) #21 ENSDARG00000111964 ##20 ENSDARG00000012073 zgc:162611 (ENSDARG00000092846) ENSDARG00000112647 ##22 ENSDARG00000091905 #18 zgc:194989 (ENSDARG00000114405) ##20 ENSDARG00000115281 #21 ENSDARG00000114500 ##22 Zebrafish MODERN SPECIES 17 GAS2 (ENSDARG00000001259) fancf (ENSDARG00000019250) slc17a6a (ENSDARG00000001127) ANO5 (ENSDARG00000015731) ano9a (ENSDARG00000078941) ##20 ENSDARG00000076320 zgc:153405 (ENSDARG00000096992) #18 ENSDARG00000114133 #31 zgc:113984 (ENSDARG00000115644) ##22 si:dkey-261m9.17 (ENSDARG00000111165) #21 ENSDARG00000114125 ##20 ENSDARG00000109755 ##19 ENSDARG00000110035 #21 ENSDARG00000032637 #18 ENSDARG00000113481 #25 ENSDARG00000112375 #22 ENSDARG00000111247 #21 zgc:173585 (ENSDARG00000089039) ##20 ENSDARG00000112967 ##22 ENSDARG00000112593 ##19 ENSDARG00000116654 ##20 ENSDARG00000113399 ##19 ENSDARG00000110812 #21 ENSDARG00000115938 ##20 ENSDARG00000115766 #18 ENSDARG00000114370 #22 ENSDARG00000114534 #21 ENSDARG00000114195 ##20 ENSDARG00000112840 ##19 ENSDARG00000114500 ##22 ENSDARG00000115281 #21 Zebrafish MODERN SPECIES 17 mphosph6 (ENSDARG00000093007) SNX20 (ENSDARG00000045554) SALL1 (ENSDARG00000075891) RBL2 (ENSDARG00000045636) rpgrip1l (ENSDARG00000051754) irx5b (ENSDARG00000074070) amfra (ENSDARG00000020218) ENSDARG00000051729 DUS2 (ENSDARG00000077607) SLC7A10 (ENSDARG00000051730) ENSDARG00000116673 faap24 (ENSDARG00000051731) bmb (ENSDARG00000096603) ENSDARG00000116781 #21 ENSDARG00000110809 ##19 ENSDARG00000114169 #22 ENSDARG00000111494 #21 ENSDARG00000086591 ##20 ENSDARG00000112528 #21 zgc:110216 (ENSDARG00000077456) #18 hist1h2a4 (ENSDARG00000051736) ##19 zgc:173552 (ENSDARG00000051737) #32 ENSDARG00000110152 #21 ENSDARG00000109737 ##20 ENSDARG00000109458 ##19 ENSDARG00000115054 #21 ENSDARG00000051735 #18 ENSDARG00000111536 #25 zgc:173552 (ENSDARG00000112131) #32 ENSDARG00000112491 #21 ENSDARG00000114895 ##20 Characiphysae ANCESTRAL SPECIES 473 ENSGT01020000230360.c.b.a.a.a.a.a.d.h.b ##19 ENSGT01100000263559.B #22 Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 325 H2A (ENSIPUG00000012097) ##19 ENSIPUG00000012107 #22 Channel catfish MODERN SPECIES 3 ENSIPUG00000003595 ENSIPUG00000003603 ENSIPUG00000003607 ##20 ENSIPUG00000003612 #18 H2A (ENSIPUG00000003622) ##19 ENSIPUG00000003626 #22 ENSIPUG00000003634 ENSIPUG00000003645 emc7b (ENSIPUG00000003653) chd6 (ENSIPUG00000003692) rbl1 (ENSIPUG00000003765) Pigu (ENSIPUG00000003857) OSGIN2 (ENSIPUG00000003905) ENSIPUG00000003924 atg3 (ENSIPUG00000003956) atp5e (ENSIPUG00000004082) cyc1 (ENSIPUG00000004093) ergic3 (ENSIPUG00000004110) romo1 (ENSIPUG00000004166) mych (ENSIPUG00000004172) ENSIPUG00000004179 Channel catfish MODERN SPECIES 479 ENSIPUG00000001270 #22 Channel catfish MODERN SPECIES 179 ENSIPUG00000009334 #22 Channel catfish MODERN SPECIES 396 H2A (ENSIPUG00000012863) ##19 ENSIPUG00000012870 #22 Clupeiformes ANCESTRAL SPECIES 759 ENSGT00990000203553.c.a.a.b.b.a.b ENSGT01020000230360.c.b.a.a.a.a.a.d ##19 ENSGT01100000263559.B #22 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 16 ENSCHAG00000004899 #18 ENSCHAG00000004929 ENSCHAG00000004955 ENSCHAG00000004984 ENSCHAG00000005004 ENSCHAG00000005045 ENSCHAG00000005075 ENSCHAG00000002567 ENSCHAG00000002659 ENSCHAG00000002690 ENSCHAG00000002717 ENSCHAG00000002844 ENSCHAG00000002901 ##19 ENSCHAG00000002931 ENSCHAG00000002955 #18 ENSCHAG00000003002 #22 ENSCHAG00000003031 ##19 ENSCHAG00000003039 ##27 ENSCHAG00000003073 ##20 ENSCHAG00000003121 ENSCHAG00000003133 capn8 (ENSCHAG00000003252) ENSCHAG00000004617 tspan34 (ENSCHAG00000009226) ENSCHAG00000009236 ENSCHAG00000009320 ENSCHAG00000009399 ENSCHAG00000009424 dand5 (ENSCHAG00000009432) rad23aa (ENSCHAG00000009450) ENSCHAG00000009468 Atlantic herring MODERN SPECIES 16 SPTBN1 (ENSCHAG00000024710) ACYP2 (ENSCHAG00000027126) ENSCHAG00000027129 sult6b1 (ENSCHAG00000027137) ENSCHAG00000027151 ENSCHAG00000027153 ENSCHAG00000027158 vipb (ENSCHAG00000002591) SLC29A1 (ENSCHAG00000002693) TMEM63B (ENSCHAG00000003353) ENSCHAG00000005624 elof1 (ENSCHAG00000005651) CNN1 (ENSCHAG00000005679) ENSCHAG00000005683 ENSCHAG00000005703 ##19 ENSCHAG00000005709 #22 ENSCHAG00000005715 ##20 ENSCHAG00000005727 ENSCHAG00000005744 ##19 ENSCHAG00000005750 #18 ENSCHAG00000005771 ##20 ENSCHAG00000005789 ENSCHAG00000005844 ENSCHAG00000005867 ##20 ENSCHAG00000005885 ENSCHAG00000005934 ENSCHAG00000005959 ENSCHAG00000006141 ENSCHAG00000006176 ENSCHAG00000006189 ENSCHAG00000006346 Euteleosteomorpha ANCESTRAL SPECIES 371 ENSGT01100000263474.a.b.a.b.a.c.a.b.b.a.a.a.a ##20 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b #28 ENSGT01100000263559.B #22 ENSGT01100000263506.a.d ENSGT01100000263567.a.a.d.b ##27 ENSGT01100000263569.a.b.b.e.b Protacanthopterygii ANCESTRAL SPECIES ENSGT01100000263559.B #22 Northern pike DUPLICATION Northern pike MODERN SPECIES 27 ENSELUG00000031155 ##27 ENSELUG00000033583 ##20 ENSELUG00000034551 ENSELUG00000032686 ENSELUG00000025616 ##27 hist2h3c (ENSELUG00000025164) #22 ENSELUG00000030790 ##20 ENSELUG00000031278 #18 ENSELUG00000032875 ##22 ENSELUG00000031995 ENSELUG00000032921 ENSELUG00000030394 ENSELUG00000028671 ##20 ENSELUG00000031902 #18 ENSELUG00000034593 ##19 ENSELUG00000031097 #22 ENSELUG00000024636 ##20 ENSELUG00000028816 #18 ENSELUG00000027817 ##27 ENSELUG00000030940 ##20 ENSELUG00000025623 #18 ENSELUG00000031904 ##22 Northern pike MODERN SPECIES 27 ENSELUG00000034136 ##22 ENSELUG00000032145 ##20 ENSELUG00000030187 #18 ENSELUG00000001737 ENSELUG00000025166 ##27 ENSELUG00000031217 ##20 ENSELUG00000026011 #18 ENSELUG00000033473 ENSELUG00000024924 ENSELUG00000032951 ENSELUG00000031155 ##27 ENSELUG00000033583 ##20 ENSELUG00000034551 ENSELUG00000032686 ENSELUG00000025616 ##27 hist2h3c (ENSELUG00000025164) #22 ENSELUG00000030790 ##20 ENSELUG00000031278 #18 ENSELUG00000032875 ##22 ENSELUG00000031995 ENSELUG00000032921 ENSELUG00000030394 ENSELUG00000028671 ##20 ENSELUG00000031902 #18 ENSELUG00000034593 ##19 ENSELUG00000031097 #22 ENSELUG00000024636 ##20 ENSELUG00000028816 #18 ENSELUG00000027817 ##27 ENSELUG00000030940 ##20 ENSELUG00000025623 #18 Acanthomorphata ANCESTRAL SPECIES 231 ENSGT01100000263567.a.b.b #32 ENSGT00990000203553.c.a.a.b.b.b ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263474.a.b.a.b.b.b.a.b.b.a ##20 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263559.A ##22 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT00990000203553.c.a.a.a.a.b ENSGT01100000263474.a.b.b.o.a.a #28 ENSGT00950000183089.c.a #18 ENSGT01100000263474.a.b.a.b.a.d ##20 ENSGT00990000203553.c.a.a.b.a.a.a.a.b ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b #28 ENSGT01100000263559.B #22 ENSGT00940000153092 Cod DUPLICATION Cod MODERN SPECIES 11 spsb3a (ENSGMOG00000017939) mrps34 (ENSGMOG00000028328) nme3 (ENSGMOG00000003474) mapk8ip3 (ENSGMOG00000003414) jpt2 (ENSGMOG00000036879) ENSGMOG00000030019 ENSGMOG00000003340 tmem11 (ENSGMOG00000003334) ENSGMOG00000003322 ENSGMOG00000003296 ENSGMOG00000027126 ##19 ENSGMOG00000037144 ##19 ENSGMOG00000033887 ENSGMOG00000023244 ##20 ENSGMOG00000022179 #18 ENSGMOG00000023058 #22 ENSGMOG00000032444 ##19 ENSGMOG00000032942 ENSGMOG00000002829 #18 ENSGMOG00000028801 ##19 ENSGMOG00000033765 ENSGMOG00000030436 ##20 ENSGMOG00000037006 ##20 ENSGMOG00000018225 ENSGMOG00000007302 nlk1 (ENSGMOG00000001747) ENSGMOG00000001761 cdipt (ENSGMOG00000001781) ENSGMOG00000031370 ENSGMOG00000029501 ENSGMOG00000005347 Cod MODERN SPECIES 17 zdhhc17 (ENSGMOG00000006985) OSBPL8 (ENSGMOG00000012772) phlda1 (ENSGMOG00000002459) ENSGMOG00000007144 ENSGMOG00000018046 ENSGMOG00000018073 ENSGMOG00000018088 ENSGMOG00000022240 ENSGMOG00000002469 PMPCB (ENSGMOG00000003425) DNAJC2 (ENSGMOG00000003391) PSMC2 (ENSGMOG00000003361) SLC26A5 (ENSGMOG00000003319) ENSGMOG00000024111 #21 ENSGMOG00000022967 ##20 ENSGMOG00000029457 #22 ENSGMOG00000001365 ENSGMOG00000024848 ENSGMOG00000024632 ENSGMOG00000000720 ENSGMOG00000009446 ENSGMOG00000009458 ENSGMOG00000030522 ##27 ENSGMOG00000034473 ##20 ENSGMOG00000025404 #21 ENSGMOG00000030396 ##19 ENSGMOG00000019887 ENSGMOG00000025782 ENSGMOG00000014645 lsm8 (ENSGMOG00000034521) ENSGMOG00000005276 Euacanthomorphacea ANCESTRAL SPECIES 136 ENSGT01020000230360.c.b.a.b.b.d.a.a #19 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263559.A ##22 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT00990000203553.c.a.a.a.a.b ENSGT01100000263474.a.b.b.o.a.a #28 ENSGT00950000183089.c.a.k.a #18 ENSGT00990000203553.c.a.a.b.a.a.a.a.b ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b #28 ENSGT01100000263559.B #22 ENSGT00940000153092 Percomorphaceae ANCESTRAL SPECIES 89 ENSGT01020000230360.c.b.a.b.a.b.c.b.b ##19 ENSGT01100000263514.A.f.w.b ENSGT00950000183089.c.b #18 ENSGT00990000203553.c.a.a.a.a.b ENSGT01100000263474.a.b.b.o.a.a #28 ENSGT00950000183089.c.a.k.a #18 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.n ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.o.b #28 ENSGT01100000263559.B #22 ENSGT00940000153092 ENSGT01100000263504.a.b.b.b.a.b ENSGT00990000203553.c.a.a.b.b.b ENSGT01100000263567.a.b.b #32 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.a ENSGT01100000263474.a.b.a.b.a.d ##20 ENSGT00950000183089.c.a.k.b.b #18 ENSGT01100000263567.a.a.d.b ##27 ENSGT01100000263506.a.d ENSGT01060000248528.b #21 ENSGT01100000263514.A.e.a ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000163509.a.b Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000165075.a.a ENSGT00940000175327 ENSGT00670000098179.d.a ENSGT00530000063371.C.a ENSGT00940000164705 ENSGT00390000010712 ENSGT00940000156835.k ENSGT00940000161176 ENSGT00550000074939 ENSGT00940000163701.b.a.b.b.b ENSGT00940000163509.a.b ENSGT00940000170476 ENSGT00940000156944.a.a ENSGT01020000230360.d ##19 ENSGT01100000263474.a.b.b.o.b.a #28 ENSGT01100000263559.B #22 ENSGT00940000153092 ENSGT00390000000002.a.a.b ENSGT00390000001803 ENSGT00940000155150.b.b ENSGT00390000000703 ENSGT00950000182994.A ENSGT00390000001134.b.ab ENSGT01100000263483.E.a.c.a ENSGT01100000263483.F.a ENSGT01100000263483.E.a.c.b ENSGT00390000001134.b.`b.a ENSGT00940000165879 ENSGT00390000006178 ENSGT00940000178567 ENSGT00940000157138.b Percomorphaceae_C ANCESTRAL SPECIES 43 ENSGT01020000230360.c.b.a.b.b.d.b.a.a ##19 ENSGT00990000203553.c.a.a.a.a.a ENSGT00950000183089.c.a.k.b.a.a #18 ENSGT01100000263559.B #22 ENSGT00940000153092 Percomorphaceae_D ANCESTRAL SPECIES ENSGT01100000263559.B #22 Anabantaria ANCESTRAL SPECIES ENSGT01100000263559.B #22 Anabantoidei ANCESTRAL SPECIES ENSGT01100000263559.B #22 Climbing perch MODERN SPECIES 13 ENSATEG00000018958 SLC39A8 (ENSATEG00000018981) manba (ENSATEG00000019029) ube2d3 (ENSATEG00000019090) ENSATEG00000019100 ENSATEG00000019114 ENSATEG00000019160 ENSATEG00000019177 MTARC2 (ENSATEG00000026060) ENSATEG00000026817 ezra (ENSATEG00000019236) nenf (ENSATEG00000019292) pacc1 (ENSATEG00000019312) ENSATEG00000027828 #28 ENSATEG00000019397 #18 ENSATEG00000028625 #22 ENSATEG00000026927 ENSATEG00000028037 #21 ENSATEG00000027307 #21 ENSATEG00000027028 #21 ENSATEG00000027301 #21 ZNF106 (ENSATEG00000019498) CAPN3 (ENSATEG00000019530) GANC (ENSATEG00000019583) TMEM87A (ENSATEG00000019615) VPS39 (ENSATEG00000019651) GALNT16 (ENSATEG00000019745) ENSATEG00000019775 EXD2 (ENSATEG00000019834) ENSATEG00000019845 ENSATEG00000019883 Eupercaria DUPLICATION Eupercaria DUPLICATION Eupercaria ANCESTRAL SPECIES ENSGT01100000263559.B.kf.a #22 Tetraodontidae ANCESTRAL SPECIES ENSGT01100000263559.B.kf.a #22 Tetraodon MODERN SPECIES 26 angel2 (ENSTNIG00000006802) vegfab (ENSTNIG00000009142) ENSTNIG00000008862 KCNH2 (ENSTNIG00000008782) ENSTNIG00000000924 ENSTNIG00000008781 ENSTNIG00000000071 aoc1 (ENSTNIG00000008780) ENSTNIG00000008779 SLC12A7 (ENSTNIG00000008778) ENSTNIG00000008777 #21 ENSTNIG00000008776 #21 ENSTNIG00000001078 #21 si:dkey-23a13.17 (ENSTNIG00000008775) #18 ENSTNIG00000008774 ##19 hist2h3c (ENSTNIG00000008773) #22 ENSTNIG00000008772 GFOD1 (ENSTNIG00000008771) KIF5B (ENSTNIG00000008770) ARHGAP12 (ENSTNIG00000008769) zeb1b (ENSTNIG00000008768) znf438 (ENSTNIG00000008767) ENSTNIG00000008766 pomp (ENSTNIG00000008765) ENSTNIG00000008764 ENSTNIG00000008763 ENSTNIG00000008762 NSMAF (ENSTNIG00000008761) ENSTNIG00000000016 ENSTNIG00000008760 SLC22A17 (ENSTNIG00000008759) Eupercaria ANCESTRAL SPECIES ENSGT01100000263559.B.kf.b #22 Eupecaria_A ANCESTRAL SPECIES 88 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT01100000263559.B.kf.b #22 Eupecaria_B ANCESTRAL SPECIES 89 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT01100000263559.B.kf.b #22 Eupecaria_C ANCESTRAL SPECIES 121 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT01100000263559.B.kf.b #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 152 ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.a.b ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b ##19 ENSGT01100000263559.B.kf.b #22 European seabass MODERN SPECIES 20 ENSDLAG00005021846 ENSDLAG00005022388 ENSDLAG00005022420 ENSDLAG00005022475 ENSDLAG00005022481 ENSDLAG00005030440 ENSDLAG00005030509 #18 ENSDLAG00005034529 #28 ENSDLAG00005029295 ENSDLAG00005020580 ENSDLAG00005033212 #28 ENSDLAG00005032920 ENSDLAG00005026756 ENSDLAG00005004752 #28 ENSDLAG00005032305 ENSDLAG00005026477 #22 ENSDLAG00005022566 map2k7 (ENSDLAG00005023630) ENSDLAG00005023678 si:ch211-214c7.5 (ENSDLAG00005023995) ENSDLAG00005023998 mcoln1a (ENSDLAG00005024028) ENSDLAG00005024396 ENSDLAG00005015356 ENSDLAG00005030621 ENSDLAG00005030658 ENSDLAG00005029691 ENSDLAG00005034838 ENSDLAG00005015380 ENSDLAG00005024431 ENSDLAG00005024565 Large yellow croaker MODERN SPECIES 481 casp3a (ENSLCRG00005018141) STOX2 (ENSLCRG00005018142) tll1 (ENSLCRG00005018147) cpe (ENSLCRG00005018297) msmo1 (ENSLCRG00005018343) KLHL2 (ENSLCRG00005018351) med28 (ENSLCRG00005018669) ENSLCRG00005018674 ENSLCRG00005018858 ENSLCRG00005018860 ENSLCRG00005018862 #28 ENSLCRG00005018863 ENSLCRG00005018864 ENSLCRG00005018865 ENSLCRG00005018867 ##19 ENSLCRG00005018868 #22 SLC25A38 (ENSLCRG00005018870) ENSLCRG00005018872 ttc26 (ENSLCRG00005018878) ubn2a (ENSLCRG00005019003) ENSLCRG00005019048 cygb2 (ENSLCRG00005002407) SPHK1 (ENSLCRG00005002415) UBE2O (ENSLCRG00005002453) aanat1 (ENSLCRG00005003294) RHBDF2 (ENSLCRG00005003314) acox1 (ENSLCRG00005004566) ten1 (ENSLCRG00005007788) evpla (ENSLCRG00005007792) srp68 (ENSLCRG00005007813) POLG2 (ENSLCRG00005008140) Tetraodontidae ANCESTRAL SPECIES ENSGT01100000263559.B.kf.b #22 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 dph2 (ENSTNIG00000008756) zgc:165532 (ENSTNIG00000008755) rgs9bp (ENSTNIG00000008754) zgc:56231 (ENSTNIG00000008753) RPS20 (ENSTNIG00000001523) ANKS6 (ENSTNIG00000008752) ENSTNIG00000008751 pigm (ENSTNIG00000008750) serpinb1l3 (ENSTNIG00000008749) snx16 (ENSTNIG00000008748) ENSTNIG00000001285 WWP1 (ENSTNIG00000008747) ENSTNIG00000008746 ENSTNIG00000008745 #21 ENSTNIG00000008744 #18 ENSTNIG00000008743 #22 cpne3 (ENSTNIG00000008742) rmdn1 (ENSTNIG00000008741) ENSTNIG00000008740 ENSTNIG00000001014 abca4a (ENSTNIG00000008739) ENSTNIG00000008738 ENSTNIG00000008736 #21 ENSTNIG00000008734 #18 cpne3 (ENSTNIG00000008732) cpne3 (ENSTNIG00000008731) idi1 (ENSTNIG00000008730) wdr37 (ENSTNIG00000008729) ADARB2 (ENSTNIG00000008728) PFKP (ENSTNIG00000008727) klf6a (ENSTNIG00000008726) Tetraodon MODERN SPECIES 26 svopl (ENSTNIG00000003457) mical3b (ENSTNIG00000003458) lta4h (ENSTNIG00000003351) dennd6b (ENSTNIG00000003350) gcc1 (ENSTNIG00000003349) arf5 (ENSTNIG00000003348) lamtor4 (ENSTNIG00000001997) atp6v1f (ENSTNIG00000001217) tnpo3 (ENSTNIG00000003347) irf5 (ENSTNIG00000003346) fbxo7 (ENSTNIG00000003345) kiaa0930 (ENSTNIG00000003344) nup50 (ENSTNIG00000003343) KCNA1 (ENSTNIG00000002493) KCNA5 (ENSTNIG00000000276) ENSTNIG00000002494 #22 ENSTNIG00000002495 ##19 CNOT2 (ENSTNIG00000002496) KCNMB4 (ENSTNIG00000002497) ptprb (ENSTNIG00000002498) PTPRR (ENSTNIG00000002499) ENSTNIG00000002500 rab21 (ENSTNIG00000002501) cand1 (ENSTNIG00000006486) ENSTNIG00000006485 ENSTNIG00000006484 ENSTNIG00000001329 ENSTNIG00000006482 ECHDC3 (ENSTNIG00000001958) kcnj8 (ENSTNIG00000006480) abcc9 (ENSTNIG00000006479) Fugu MODERN SPECIES 1 mpp7a (ENSTRUG00000004016) ENSTRUG00000028053 ODAD2 (ENSTRUG00000004452) ENSTRUG00000031405 ENSTRUG00000030866 rab18a (ENSTRUG00000004984) mkxa (ENSTRUG00000004560) itgb1a (ENSTRUG00000004551) nrp1a (ENSTRUG00000002836) ENSTRUG00000002885 ENSTRUG00000029964 ENSTRUG00000028907 ENSTRUG00000029393 ENSTRUG00000012047 ENSTRUG00000028313 ##19 ENSTRUG00000027909 #22 ENSTRUG00000029713 ENSTRUG00000031791 ENSTRUG00000031069 ENSTRUG00000027530 CUL2 (ENSTRUG00000011837) CCNY (ENSTRUG00000027825) GJD4 (ENSTRUG00000020169) fzd8a (ENSTRUG00000011564) klf6a (ENSTRUG00000021570) PFKP (ENSTRUG00000011032) ADARB2 (ENSTRUG00000010848) wdr37 (ENSTRUG00000010707) idi1 (ENSTRUG00000010615) cpne3 (ENSTRUG00000009713) cpne3 (ENSTRUG00000021775) Eupercaria ANCESTRAL SPECIES 56 ENSGT01020000230360.c.b.a.b.b.d.b.a.a ##19 ENSGT00990000203553.c.a.a.a.a.a ENSGT00950000183089.c.a.k.b.a.a #18 ENSGT01100000263559.B.lf #22 ENSGT00940000153092 Eupecaria_A ANCESTRAL SPECIES 57 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B.lf #22 Eupecaria_B ANCESTRAL SPECIES 52 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B.lf #22 Eupecaria_C ANCESTRAL SPECIES ENSGT01100000263559.B.lf #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT01100000263559.B.lf #22 Large yellow croaker MODERN SPECIES 491 gpr22a (ENSLCRG00005012646) ENSLCRG00005012649 ENSLCRG00005012650 rab21 (ENSLCRG00005012651) KCNMB4 (ENSLCRG00005012653) ENSLCRG00005012658 PTPRR (ENSLCRG00005012683) ENSLCRG00005013153 ENSLCRG00005013157 ENSLCRG00005013175 ENSLCRG00005013176 #21 ENSLCRG00005013177 ENSLCRG00005013178 #31 ENSLCRG00005013182 #18 ENSLCRG00005013184 ENSLCRG00005013185 #22 KCNA5 (ENSLCRG00005013188) KCNA1 (ENSLCRG00005013189) ENSLCRG00005013190 ARHGAP8 (ENSLCRG00005013192) ENSLCRG00005013194 nup50 (ENSLCRG00005013195) kiaa0930 (ENSLCRG00005013198) fbxo7 (ENSLCRG00005013243) RTCB (ENSLCRG00005013246) xpot (ENSLCRG00005013248) rpl18a (ENSLCRG00005013251) ENSLCRG00005013259 pthlha (ENSLCRG00005013301) C11orf98 (ENSLCRG00005013303) ENSLCRG00005013306 Perciformes ANCESTRAL SPECIES 74 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B.lf #22 Perciformes_a ANCESTRAL SPECIES ENSGT01100000263559.B.lf #22 Pike perch MODERN SPECIES 157 ENSSLUG00000017045 ##20 ENSSLUG00000016937 ENSSLUG00000016927 ENSSLUG00000016921 #28 ENSSLUG00000016918 ##19 ENSSLUG00000016914 ##27 ENSSLUG00000016907 steap4 (ENSSLUG00000016831) ENSSLUG00000016787 ENSSLUG00000016727 ENSSLUG00000016714 #21 ENSSLUG00000016707 ENSSLUG00000016703 ##20 ENSSLUG00000016697 #28 ENSSLUG00000016695 ##19 ENSSLUG00000016691 #22 svbp (ENSSLUG00000016684) wnt7aa (ENSSLUG00000016680) ptpdc1a (ENSSLUG00000016668) barx1 (ENSSLUG00000016661) phf2 (ENSSLUG00000016581) FAM120A (ENSSLUG00000016526) CASS4 (ENSSLUG00000016507) cstf1 (ENSSLUG00000016501) ENSSLUG00000016494 ENSSLUG00000016486 pdrg1 (ENSSLUG00000016480) ENSSLUG00000016477 aldh1l1 (ENSSLUG00000016151) ENSSLUG00000016125 ENSSLUG00000016106 Cottioidei ANCESTRAL SPECIES 111 ENSGT01100000263569.a.b.b.f ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.B.lf #22 Stickleback MODERN SPECIES 101 ENSGACG00000010538 ENSGACG00000010540 ENSGACG00000010544 ##21 H3C15 (ENSGACG00000010547) #22 Tetraodontidae ANCESTRAL SPECIES 196 ENSGT01100000263569.a.b.a.b.a.a ENSGT01100000263504.a.b.b.b.b.y ENSGT01100000263559.A ##22 ENSGT00950000183089.c.a.k.b.a.a #18 ENSGT01100000263559.B.lf #22 ENSGT01060000248528.b #21 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b.c.a ##19 Tetraodon MODERN SPECIES 22 GPR119 (ENSTNIG00000001505) clk4b (ENSTNIG00000007593) ENSTNIG00000007594 btg4 (ENSTNIG00000007595) hnrnpaba (ENSTNIG00000007596) ENSTNIG00000007597 hspb9l (ENSTNIG00000001965) ENSTNIG00000007598 zmat2 (ENSTNIG00000007599) lcp2a (ENSTNIG00000001645) FOXI2 (ENSTNIG00000001292) ENSTNIG00000000447 ENSTNIG00000007600 ADRA1B (ENSTNIG00000007601) ENSTNIG00000007602 #18 ENSTNIG00000007603 #22 ENSTNIG00000000699 APBB3 (ENSTNIG00000007604) ENSTNIG00000007605 camk2a (ENSTNIG00000007606) rps14 (ENSTNIG00000007607) chm (ENSTNIG00000007608) ENSTNIG00000007609 ENSTNIG00000000702 ENSTNIG00000007610 ENSTNIG00000007611 ENSTNIG00000007612 ENSTNIG00000000432 ENSTNIG00000007613 DBN1 (ENSTNIG00000007614) GRK6 (ENSTNIG00000007615) Fugu DUPLICATION Fugu MODERN SPECIES 8 ENSTRUG00000023039 #18 ENSTRUG00000025869 ENSTRUG00000032970 ##22 ENSTRUG00000002689 #18 ENSTRUG00000027124 ##22 ENSTRUG00000026986 ENSTRUG00000029643 ENSTRUG00000029122 ENSTRUG00000032916 ENSTRUG00000024593 ##27 ENSTRUG00000032531 ##19 ENSTRUG00000024579 ENSTRUG00000032950 #22 ENSTRUG00000021312 ##19 ENSTRUG00000026851 #18 ENSTRUG00000026537 #22 ENSTRUG00000032005 #21 ENSTRUG00000020802 ENSTRUG00000029500 #21 nansa (ENSTRUG00000015552) clta (ENSTRUG00000015571) gne (ENSTRUG00000015607) cplx2l (ENSTRUG00000015618) TMOD1 (ENSTRUG00000015628) stra6l (ENSTRUG00000019975) ENSTRUG00000022760 abca1a (ENSTRUG00000015743) ENSTRUG00000032261 SGCZ (ENSTRUG00000015887) tusc3 (ENSTRUG00000017650) ENSTRUG00000017618 Fugu MODERN SPECIES 8 xpa (ENSTRUG00000027763) slc24a2 (ENSTRUG00000015445) H3C1 (ENSTRUG00000023777) ENSTRUG00000023039 #18 ENSTRUG00000025869 ENSTRUG00000032970 ##22 ENSTRUG00000002689 #18 ENSTRUG00000027124 ##22 ENSTRUG00000026986 ENSTRUG00000029643 ENSTRUG00000029122 ENSTRUG00000032916 ENSTRUG00000024593 ##27 ENSTRUG00000032531 ##19 ENSTRUG00000024579 ENSTRUG00000032950 #22 ENSTRUG00000021312 ##19 ENSTRUG00000026851 #18 ENSTRUG00000026537 #22 ENSTRUG00000032005 #21 ENSTRUG00000020802 ENSTRUG00000029500 #21 nansa (ENSTRUG00000015552) clta (ENSTRUG00000015571) gne (ENSTRUG00000015607) cplx2l (ENSTRUG00000015618) TMOD1 (ENSTRUG00000015628) stra6l (ENSTRUG00000019975) ENSTRUG00000022760 abca1a (ENSTRUG00000015743) ENSTRUG00000032261 Ovalentaria ANCESTRAL SPECIES 122 ENSGT01100000263474.a.b.b.o.b.a #28 ENSGT01100000263559.B #22 Atherinomorphae ANCESTRAL SPECIES 23 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263506.a.d ENSGT00990000203553.c.a.a.b.b.a.a.a.a.a.a.b ENSGT01030000234575.c.a.a.a.a.a.b.a.a ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b ENSGT00390000005412 ENSGT00940000155563.k.b.b ENSGT01050000244891.E.a.a ENSGT00390000002361 ENSGT00940000154830.d ENSGT00390000009760 ENSGT00940000157228.i.a ENSGT00940000157228.i.b ENSGT00940000156104.B Oryzias ANCESTRAL SPECIES ENSGT01100000263559.B #22 Oryzias_b ANCESTRAL SPECIES ENSGT01100000263559.B #22 Javanese ricefish MODERN SPECIES PRPSAP1 (ENSOJAG00000015912) ENSOJAG00000016095 ENSOJAG00000016208 #18 ENSOJAG00000016236 ENSOJAG00000016257 ENSOJAG00000016278 ENSOJAG00000016296 ##19 ENSOJAG00000016305 ENSOJAG00000016332 ENSOJAG00000016343 ENSOJAG00000016350 ENSOJAG00000016363 ENSOJAG00000016397 ENSOJAG00000016431 ##19 ENSOJAG00000016444 ENSOJAG00000016476 #22 ENSOJAG00000016480 ENSOJAG00000016496 #18 capn9 (ENSOJAG00000016557) taf5l (ENSOJAG00000017027) nup133 (ENSOJAG00000017093) ENSOJAG00000018258 ENSOJAG00000018276 CCSAP (ENSOJAG00000018296) cdc6 (ENSOJAG00000018306) ##10 ENSOJAG00000018403 MRPL21 (ENSOJAG00000018424) mrpl45 (ENSOJAG00000018748) ENSOJAG00000018767 socs7 (ENSOJAG00000018901) sp2 (ENSOJAG00000018969) Cyprinodontiformes ANCESTRAL SPECIES 97 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263506.a.d ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.b ENSGT01100000263569.a.b.a.b.a.b.b.a Aplocheiloidei ANCESTRAL SPECIES 399 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263506.a.d Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015002783 ENSNFUG00015002780 or30bt5 (ENSNFUG00015002776) ENSNFUG00015002773 ENSNFUG00015002771 ENSNFUG00015002767 or71aq1 (ENSNFUG00015002766) ENSNFUG00015002763 ENSNFUG00015002759 PGAP2 (ENSNFUG00015002756) stim1a (ENSNFUG00015002437) ENSNFUG00015002375 ENSNFUG00015002371 ENSNFUG00015002368 #18 ENSNFUG00015002366 ##19 ENSNFUG00015002361 #22 SI (ENSNFUG00015002356) #21 ENSNFUG00015002351 robo2 (ENSNFUG00015001043) ENSNFUG00015000779 ENSNFUG00015000777 ENSNFUG00015000773 ENSNFUG00015000770 ROBO1 (ENSNFUG00015000725) ENSNFUG00015000662 APBB1 (ENSNFUG00015000646) ILK (ENSNFUG00015000630) RRP8 (ENSNFUG00015000624) CR954145.1 (ENSNFUG00015000621) ENSNFUG00015000619 DIABLO (ENSNFUG00015000613) Cyprinodontoidei ANCESTRAL SPECIES 159 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263567.a.b.b #32 Poeciliinae ANCESTRAL SPECIES 95 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263567.a.b.b #32 Poecilia ANCESTRAL SPECIES 150 ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.b #18 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263567.a.b.b #32 NAME_6 ANCESTRAL SPECIES 195 ENSGT00950000183089.c.a.k.b.b.k.b.b #18 ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.b #18 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263567.a.b.b #32 ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.b.i.a ##19 ENSGT01100000263504.a.b.b.b.a.b ENSGT01030000234540.C.k ENSGT01030000234540.C.l ENSGT00940000172777 ENSGT00390000012496.b.h ENSGT00940000158350 ENSGT00950000182933.C.j ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.v ENSGT00950000183127.c.b.d.a.b.a.a.a.a.a.d.a ENSGT00940000161847.b.a.e.b.pb.a.f.a ENSGT01100000263538.A.a.a.a.j.a.a.a.b.a.a.u.a.a ENSGT01100000263538.A.a.a.a.j.a.b.b Sailfin molly MODERN SPECIES 2327 ENSPLAG00000004357 ENSPLAG00000004305 #22 ENSPLAG00000004235 ENSPLAG00000004175 mrpl48 (ENSPLAG00000004162) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 320 ARHGAP8 (ENSPFOG00000015678) ENSPFOG00000015620 nup50 (ENSPFOG00000015591) kiaa0930 (ENSPFOG00000015526) fbxo7 (ENSPFOG00000015474) h2ax (ENSPFOG00000020620) ##19 ENSPFOG00000015460 #21 ENSPFOG00000020845 #32 ENSPFOG00000020844 #21 ENSPFOG00000015449 #18 KCNMB4 (ENSPFOG00000015443) CNOT2 (ENSPFOG00000015440) ENSPFOG00000015423 ##19 ENSPFOG00000020843 ENSPFOG00000020842 #18 H3C15 (ENSPFOG00000020841) #22 ENSPFOG00000020840 ENSPFOG00000015415 ##19 Amazon molly MODERN SPECIES 886 ENSPFOG00000017848 ENSPFOG00000017855 ENSPFOG00000017852 ENSPFOG00000020819 ##19 hist2h3c (ENSPFOG00000024515) #22 ENSPFOG00000020820 #21 ENSPFOG00000017862 ENSPFOG00000017865 ENSPFOG00000023736 ENSPFOG00000020821 ##19 ENSPFOG00000017867 ENSPFOG00000017868 ENSPFOG00000017874 ENSPFOG00000023356 ENSPFOG00000017885 SMURF2 (ENSPFOG00000017936) Ovalentaria_B ANCESTRAL SPECIES 153 ENSGT01100000263474.a.b.b.o.b.a #28 ENSGT01100000263559.B #22 Pomacentridae ANCESTRAL SPECIES ENSGT01100000263559.B #22 Pomacentridae_A ANCESTRAL SPECIES ENSGT01100000263559.B #22 Amphiprion ANCESTRAL SPECIES 385 ENSGT01100000263474.a.b.b.o.b.a.b.b.b.a #28 ENSGT01100000263559.B #22 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 725 ENSAOCG00000000116 #28 ENSAOCG00000003971 #21 ENSAOCG00000003968 #18 ENSAOCG00000003960 ##27 ENSAOCG00000003940 ENSAOCG00000003918 ENSAOCG00000003915 #28 ENSAOCG00000003891 ENSAOCG00000003858 #34 ENSAOCG00000003855 ENSAOCG00000003837 #28 ENSAOCG00000003834 ENSAOCG00000000102 #28 ENSAOCG00000003824 #22 ENSAOCG00000003806 #34 ENSAOCG00000003801 #28 ENSAOCG00000003765 ##19 ENSAOCG00000003759 ENSAOCG00000003736 atpv0e2 (ENSAOCG00000003732) ENSAOCG00000003726 ENTPD7 (ENSAOCG00000003719) slc25a28 (ENSAOCG00000003701) NKX2-3 (ENSAOCG00000003691) Clown anemonefish MODERN SPECIES 1438 msmo1 (ENSAOCG00000009513) KLHL2 (ENSAOCG00000009486) med28 (ENSAOCG00000009427) lap3 (ENSAOCG00000009407) ENSAOCG00000009370 ##20 ENSAOCG00000009358 ENSAOCG00000009341 #28 ENSAOCG00000009227 #22 H4C7 (ENSAOCG00000009141) ENSAOCG00000009129 #18 ENSAOCG00000000560 #28 ENSAOCG00000009105 Cichlidae ANCESTRAL SPECIES ENSGT01100000263559.B #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT01100000263559.B #22 Nile tilapia MODERN SPECIES 1 ENSONIG00000021215 ENSONIG00000017828 ENSONIG00000030223 ENSONIG00000033957 ENSONIG00000021216 chm (ENSONIG00000017832) rps14 (ENSONIG00000017838) camk2a (ENSONIG00000017842) ENSONIG00000017849 APBB3 (ENSONIG00000017851) ENSONIG00000028803 ENSONIG00000026809 ENSONIG00000017862 ENSONIG00000017854 ENSONIG00000032976 ENSONIG00000037819 #22 ENSONIG00000037959 ENSONIG00000021217 ##19 ADRA1B (ENSONIG00000036711) ENSONIG00000035922 ENSONIG00000028584 ENSONIG00000041680 ENSONIG00000017861 ponzr2 (ENSONIG00000039353) nhp2 (ENSONIG00000028712) ENSONIG00000040509 lcp2a (ENSONIG00000017868) zmat2 (ENSONIG00000017873) slbp2 (ENSONIG00000017877) ENSONIG00000017879 hspb9l (ENSONIG00000021218) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT01100000263559.B #22 Haplochromini ANCESTRAL SPECIES ENSGT01100000263559.B #22 Haplochromini_A ANCESTRAL SPECIES 168 ENSGT01100000263559.B #22 ENSGT01060000248528.b #21 ENSGT01100000263514.A.e.a Haplochromini_B ANCESTRAL SPECIES 165 ENSGT01100000263559.B #22 ENSGT01060000248528.b.xe #21 ENSGT01100000263504.a.b.b.b.b.y ENSGT01020000230360.c.b.a.b.a.b.c.a.a.b ##19 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 15 ENSACLG00000004873 ENSACLG00000004870 ENSACLG00000004849 ENSACLG00000004844 ENSACLG00000004829 ENSACLG00000004826 ENSACLG00000004682 ENSACLG00000004657 ENSACLG00000004600 ENSACLG00000004588 ENSACLG00000004546 ENSACLG00000004536 ENSACLG00000004526 ENSACLG00000004511 ENSACLG00000004496 ##19 ENSACLG00000004412 #22 ENSACLG00000004366 ENSACLG00000004265 ENSACLG00000004239 ENSACLG00000003570 ENSACLG00000003557 ENSACLG00000003546 ENSACLG00000003542 ENSACLG00000002995 ENSACLG00000002979 ENSACLG00000002945 ENSACLG00000002885 ENSACLG00000002844 ENSACLG00000002810 ENSACLG00000002785 ENSACLG00000002771 Eastern happy MODERN SPECIES 8 ing3 (ENSACLG00000006777) tspan12 (ENSACLG00000006802) gpr19 (ENSACLG00000006815) crebl2 (ENSACLG00000006824) dusp16 (ENSACLG00000006831) eps8a (ENSACLG00000006856) PTPRO (ENSACLG00000006942) ENSACLG00000007016 socs2 (ENSACLG00000007022) FLNC (ENSACLG00000007030) ENSACLG00000007078 sco2 (ENSACLG00000007084) ncaph2 (ENSACLG00000007091) kcnd2 (ENSACLG00000007563) si:ch73-368j24.12 (ENSACLG00000007578) ENSACLG00000007594 #22 ENSACLG00000007642 KCNA5 (ENSACLG00000007649) ENSACLG00000007661 ARHGAP8 (ENSACLG00000008301) PHF21B (ENSACLG00000008319) nup50 (ENSACLG00000008324) kiaa0930 (ENSACLG00000008334) fbxo7 (ENSACLG00000008351) rtcb (ENSACLG00000008367) xpot (ENSACLG00000008404) rpl18a (ENSACLG00000008450) ENSACLG00000008466 pthlha (ENSACLG00000008477) ENSACLG00000008489 C11orf98 (ENSACLG00000008497) Eastern happy MODERN SPECIES 26 ENSACLG00000012714 gmppb (ENSACLG00000012735) ENSACLG00000012742 ENSACLG00000012775 ENSACLG00000012781 ##27 ENSACLG00000012883 ENSACLG00000012889 gdf3 (ENSACLG00000012901) pgap2 (ENSACLG00000012916) ENSACLG00000012921 ENSACLG00000012923 ENSACLG00000012956 #21 ENSACLG00000012957 ##19 ENSACLG00000012958 ENSACLG00000012970 ##19 ENSACLG00000012973 #22 ENSACLG00000013002 #21 ENSACLG00000013004 ENSACLG00000013009 ENSACLG00000013076 ENSACLG00000013120 ENSACLG00000013154 ENSACLG00000013166 ENSACLG00000013171 ENSACLG00000013363 ENSACLG00000013365 ENSACLG00000013423 ENSACLG00000013428 ENSACLG00000013452 ENSACLG00000013465 Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 5 GALNT10 (ENSMMDG00005015872) ENSMMDG00005015871 sap30l (ENSMMDG00005015870) ENSMMDG00005015866 ponzr2 (ENSMMDG00005015863) ENSMMDG00005015862 #21 ENSMMDG00005015860 ##19 ENSMMDG00005015857 ENSMMDG00005015856 #18 ENSMMDG00005015854 ENSMMDG00005015852 ##19 ENSMMDG00005015849 ENSMMDG00005015847 #18 ENSMMDG00005015845 ##20 ENSMMDG00005015843 ##20 ENSMMDG00005015841 #22 ENSMMDG00005015839 ENSMMDG00005015837 ##19 ENSMMDG00005015835 ##20 ENSMMDG00005015832 ENSMMDG00005015830 ENSMMDG00005015827 #18 ENSMMDG00005015826 ENSMMDG00005015824 ##19 zgc:123105 (ENSMMDG00005015821) clk4b (ENSMMDG00005015818) btg4 (ENSMMDG00005015817) hnrnpaba (ENSMMDG00005015814) st6gal1 (ENSMMDG00005015811) ncf1 (ENSMMDG00005015807) gria1b (ENSMMDG00005015799) Pinecone sodierfish MODERN SPECIES 22 ENSMMDG00005000619 ENSMMDG00005000616 ENSMMDG00005000610 #32 ENSMMDG00005000607 ##19 ENSMMDG00005000466 slc18a2 (ENSMMDG00005000429) ENSMMDG00005000418 ENSMMDG00005000414 ENSMMDG00005000408 ENSMMDG00005000399 ENSMMDG00005000394 ENSMMDG00005000388 ENSMMDG00005000384 ENSMMDG00005000379 ENSMMDG00005000375 #28 ENSMMDG00005000372 #22 ENSMMDG00005000367 ##19 ENSMMDG00005000363 #18 ENSMMDG00005000361 #28 ENSMMDG00005000356 ENSMMDG00005000351 ##19 ENSMMDG00005000345 ##27 ENSMMDG00005000335 ENSMMDG00005007722 ENSMMDG00005007721 ENSMMDG00005007719 ##27 ENSMMDG00005007715 #28 ENSMMDG00005007713 #18 ENSMMDG00005007711 ENSMMDG00005007708 ##27 psmd3 (ENSMMDG00005006395) Sarcopterygii ANCESTRAL SPECIES 284 ENSGT00990000203553.c.a.a.a.b ENSGT01100000263474.a.b.b #28 ENSGT00950000183089 #18 ENSGT01100000263514.A.f ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A ##22 ENSGT00940000153118 ENSGT00940000153092 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263474.a.b.a #20 ENSGT01100000263504.a.b.b.b.a.a Tetrapoda ANCESTRAL SPECIES 133 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263474.a.b.a.c.a #20 ENSGT00940000155501.b ENSGT01100000263567.a.a ##27 ENSGT01100000263506.a ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b #28 ENSGT00940000153118 ENSGT01100000263559.A ##22 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT00940000164494 ENSGT01100000263569.a.b.b ENSGT01100000263504.b ENSGT01100000263514.A.f ENSGT00950000183089 #18 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.a #21 ENSGT01100000263474.a.b.a.d #20 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a ENSGT01100000263474.a.a ##20 ENSGT01020000230360.c.b.a.b.b.d #19 Amniota ANCESTRAL SPECIES 126 ENSGT00940000153118.db.b ENSGT01100000263559.A.f ##22 ENSGT00940000153092.a.a ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Mammalia ANCESTRAL SPECIES 161 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Theria ANCESTRAL SPECIES 69 ENSGT01100000263474.a.b.a.d #20 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263504.a.b.b.b.b ENSGT00940000160426 ENSGT01100000263575.A ENSGT00940000153125.D ENSGT01100000263506.a.e.a ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b #28 ENSGT00940000153092.a.a ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Eutheria ANCESTRAL SPECIES 38 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000155501.a.b ENSGT01060000248528.b.kh #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT00940000153118.db.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.b ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT00940000153092.a.a.d ENSGT01100000263504.a.b.b.b.b ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT00940000153125.A ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a Atlantogenata ANCESTRAL SPECIES 66 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 Afrotheria ANCESTRAL SPECIES 286 ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 Afrotheria_a ANCESTRAL SPECIES 287 ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 Elephant DUPLICATION Elephant MODERN SPECIES 26 MFSD14A (ENSLAFG00000032648) SLC35A3 (ENSLAFG00000007403) AGL (ENSLAFG00000000619) FRRS1 (ENSLAFG00000010929) PALMD (ENSLAFG00000005199) ENSLAFG00000031707 ENSLAFG00000029191 ENSLAFG00000018352 H2BC18 (ENSLAFG00000031442) ENSLAFG00000029272 ENSLAFG00000026296 ENSLAFG00000025802 #22 ENSLAFG00000029422 ENSLAFG00000021961 ENSLAFG00000027548 ENSLAFG00000029983 #22 H2BC21 (ENSLAFG00000007572) ENSLAFG00000031642 H2AC21 (ENSLAFG00000001481) BOLA1 (ENSLAFG00000008527) SV2A (ENSLAFG00000008529) SF3B4 (ENSLAFG00000008531) MTMR11 (ENSLAFG00000008533) OTUD7B (ENSLAFG00000026624) VPS45 (ENSLAFG00000018411) PLEKHO1 (ENSLAFG00000018415) ANP32E (ENSLAFG00000026778) CA14 (ENSLAFG00000004703) APH1A (ENSLAFG00000004705) C1orf54 (ENSLAFG00000022852) CIART (ENSLAFG00000002729) Elephant MODERN SPECIES 26 ANP32E (ENSLAFG00000026778) PLEKHO1 (ENSLAFG00000018415) VPS45 (ENSLAFG00000018411) OTUD7B (ENSLAFG00000026624) MTMR11 (ENSLAFG00000008533) SF3B4 (ENSLAFG00000008531) SV2A (ENSLAFG00000008529) BOLA1 (ENSLAFG00000008527) H2AC21 (ENSLAFG00000001481) ENSLAFG00000031642 H2BC21 (ENSLAFG00000007572) ENSLAFG00000029983 #22 ENSLAFG00000027548 ENSLAFG00000021961 ENSLAFG00000029422 ENSLAFG00000025802 #22 ENSLAFG00000026296 ENSLAFG00000029272 H2BC18 (ENSLAFG00000031442) ENSLAFG00000018352 ENSLAFG00000029191 ENSLAFG00000031707 PALMD (ENSLAFG00000005199) FRRS1 (ENSLAFG00000010929) AGL (ENSLAFG00000000619) SLC35A3 (ENSLAFG00000007403) MFSD14A (ENSLAFG00000032648) SASS6 (ENSLAFG00000002382) TRMT13 (ENSLAFG00000002383) LRRC39 (ENSLAFG00000002386) DBT (ENSLAFG00000006373) Tenrec MODERN SPECIES 15603 ENSETEG00000012263 #22 Xenarthra ANCESTRAL SPECIES 790 ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000162350.b.b ENSGT00390000013440 Sloth MODERN SPECIES 12818 ENSCHOG00000000565 #22 H2BC21 (ENSCHOG00000000567) H2AC20 (ENSCHOG00000000570) H2AC21 (ENSCHOG00000000571) Armadillo MODERN SPECIES 1834 ANP32E (ENSDNOG00000034773) PLEKHO1 (ENSDNOG00000041988) VPS45 (ENSDNOG00000013685) OTUD7B (ENSDNOG00000039147) MTMR11 (ENSDNOG00000002431) ENSDNOG00000048908 SV2A (ENSDNOG00000030740) BOLA1 (ENSDNOG00000000839) H2AC21 (ENSDNOG00000037547) ENSDNOG00000043400 ENSDNOG00000037369 ENSDNOG00000043843 ENSDNOG00000040113 ENSDNOG00000036815 ENSDNOG00000031169 H3C14 (ENSDNOG00000040427) #22 H2BC18 (ENSDNOG00000041447) ENSDNOG00000037158 FCGR1A (ENSDNOG00000035779) ENSDNOG00000039714 ENSDNOG00000040102 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000163102 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163388 ENSGT00940000163486 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a ENSGT01100000263486.a.b.a.b.a ENSGT01100000263486.a.b.b ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh.yb #21 ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000153253.b.a.h ENSGT00940000160281 ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT01100000263474.a.b.b.f #28 ENSGT00940000153125.D.a.b ENSGT01100000263506.a.e.a.a.a.b.b.b ENSGT00940000162956 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000153125.D.a.b ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00940000153125.C ENSGT00940000160281 ENSGT00940000153104.e.b.a.b ENSGT00940000162941 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.a.b.a ENSGT01100000263474.a.b.a.d #20 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000160426 ENSGT01100000263575.B.u ENSGT01100000263548.a.b.b ENSGT01100000263486.a.a ENSGT00940000163388 ENSGT00940000163165 ENSGT00940000161576 ENSGT00940000163521 ENSGT00940000159644 ENSGT00940000163102 ENSGT00940000162298 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Tree shrew MODERN SPECIES 2461 H3C14 (ENSTBEG00000015119) #22 ENSTBEG00000015112 #21 H2BC18 (ENSTBEG00000015103) FCGR1A (ENSTBEG00000015034) Glires ANCESTRAL SPECIES ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Pika DUPLICATION Pika MODERN SPECIES 4549 ENSOPRG00000010762 ##22 ENSOPRG00000010770 ENSOPRG00000010773 H3C15 (ENSOPRG00000010778) #22 H2BC21 (ENSOPRG00000010785) H2AC20 (ENSOPRG00000010787) H2AC21 (ENSOPRG00000010790) BOLA1 (ENSOPRG00000010793) SV2A (ENSOPRG00000010799) SF3B4 (ENSOPRG00000010808) MTMR11 (ENSOPRG00000010825) OTUD7B (ENSOPRG00000010849) VPS45 (ENSOPRG00000010903) PLEKHO1 (ENSOPRG00000010923) Pika MODERN SPECIES 4845 ENSOPRG00000012610 #21 ENSOPRG00000012606 #22 H2BC18 (ENSOPRG00000012604) ENSOPRG00000012597 Rodentia ANCESTRAL SPECIES 6 ENSGT01100000263506.a.e.a.a.b.a ENSGT01060000248528.b.kh.xb.b.b #21 ENSGT01100000263506.a.f.b ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT01060000248528.b.kh.xb.b.a #21 ENSGT01060000248528.b.jh.a.a.a #21 ENSGT00940000153118.db.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT01030000234553.b.b.c.b.b.c ENSGT01030000234553.b.b.c.b.a ENSGT00940000162956 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT00940000153125.F.g ENSGT00940000160281 ENSGT00940000153253.b.a.h ENSGT00940000162941 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263506.a.f.b ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.jh.a.a.a #21 ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263474.a.b.a.d #20 ENSGT01100000263506.a.e.a.a.b.a ENSGT01060000248528.b.kh.xb.b.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ENSGT00940000153092.a.b.f ENSGT01100000263514.A.e.a.a.b ENSGT00940000162950 Kangaroo rat MODERN SPECIES 523 Btn1a1 (ENSDORG00000000452) Btn2a2 (ENSDORG00000000451) ENSDORG00000030035 #21 ENSDORG00000023996 ENSDORG00000025950 #21 ENSDORG00000025258 ENSDORG00000024715 ENSDORG00000024928 H1f4 (ENSDORG00000005256) ENSDORG00000027998 ENSDORG00000025947 ENSDORG00000005251 ENSDORG00000025836 ##22 ENSDORG00000027130 ENSDORG00000027742 ENSDORG00000028336 #22 ENSDORG00000025727 #21 H1f1 (ENSDORG00000005238) Slc17a2 (ENSDORG00000014558) Slc17a1 (ENSDORG00000014554) Slc17a4 (ENSDORG00000011816) H2bc1 (ENSDORG00000024877) ##20 Scgn (ENSDORG00000013668) Carmil1 (ENSDORG00000013666) Cmah (ENSDORG00000007165) Ripor2 (ENSDORG00000014570) Gmnn (ENSDORG00000014569) BC005537 (ENSDORG00000024875) Acot13 (ENSDORG00000006685) Tdp2 (ENSDORG00000006684) ENSDORG00000006683 Myomorpha ANCESTRAL SPECIES 11 ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263506.a.f.b ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.jh.a.a.a #21 ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263474.a.b.a.d #20 ENSGT01100000263506.a.e.a.a.b.a ENSGT01060000248528.b.kh.xb.b.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000153092.a.b.f ENSGT01100000263514.A.e.a.a.b ENSGT00940000162950 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.a ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b Lesser Egyptian jerboa MODERN SPECIES 194 ENSJJAG00000013504 #21 ENSJJAG00000017822 ENSJJAG00000013528 ENSJJAG00000013454 #21 ENSJJAG00000015919 Btn2a2 (ENSJJAG00000015456) Btn1a1 (ENSJJAG00000013358) Abt1 (ENSJJAG00000012693) ENSJJAG00000005342 ENSJJAG00000022549 ENSJJAG00000016030 Prss16 (ENSJJAG00000015051) Pom121l2 (ENSJJAG00000014729) Zfp184 (ENSJJAG00000000455) ENSJJAG00000000223 ENSJJAG00000012933 #22 ENSJJAG00000012941 ENSJJAG00000013681 ENSJJAG00000013718 #21 ENSJJAG00000021608 #21 ENSJJAG00000013582 Zkscan8 (ENSJJAG00000013713) ENSJJAG00000012048 ENSJJAG00000011972 ENSJJAG00000011413 Zscan26 (ENSJJAG00000010881) ENSJJAG00000004576 Gpx6 (ENSJJAG00000000873) ENSJJAG00000000066 Trim27 (ENSJJAG00000022382) ENSJJAG00000013062 Muroidea ANCESTRAL SPECIES 15 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.f.b ENSGT01060000248528.b.jh.a.a.a #21 ENSGT01060000248528.b.kh.xb.b.a #21 ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000160426 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000160281 ENSGT00940000153253.b.a.h ENSGT00940000164849 ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 769 ENSNGAG00000020628 #22 ENSNGAG00000012803 #21 ENSNGAG00000009633 ENSNGAG00000008922 #28 ENSNGAG00000018017 ENSNGAG00000017761 ##22 ENSNGAG00000017588 #21 H1f4 (ENSNGAG00000001403) ENSNGAG00000019522 ENSNGAG00000017064 H1f6 (ENSNGAG00000010517) ENSNGAG00000010665 #21 Hfe (ENSNGAG00000016849) H1f2 (ENSNGAG00000004187) ENSNGAG00000007331 ENSNGAG00000010646 #22 ENSNGAG00000009026 #21 ENSNGAG00000010543 #21 ENSNGAG00000011159 #22 H1f1 (ENSNGAG00000007966) Slc17a2 (ENSNGAG00000022747) Slc17a3 (ENSNGAG00000001190) Slc17a1 (ENSNGAG00000008612) Slc17a4 (ENSNGAG00000017264) H2bc1 (ENSNGAG00000007052) ##20 Scgn (ENSNGAG00000019333) Carmil1 (ENSNGAG00000023801) Upper Galilee mountains blind mole rat MODERN SPECIES 769 Carmil1 (ENSNGAG00000023801) Scgn (ENSNGAG00000019333) H2bc1 (ENSNGAG00000007052) ##20 Slc17a4 (ENSNGAG00000017264) Slc17a1 (ENSNGAG00000008612) Slc17a3 (ENSNGAG00000001190) Slc17a2 (ENSNGAG00000022747) H1f1 (ENSNGAG00000007966) ENSNGAG00000011159 #22 ENSNGAG00000010543 #21 ENSNGAG00000009026 #21 ENSNGAG00000010646 #22 ENSNGAG00000007331 H1f2 (ENSNGAG00000004187) Hfe (ENSNGAG00000016849) ENSNGAG00000010665 #21 H1f6 (ENSNGAG00000010517) ENSNGAG00000017064 ENSNGAG00000019522 H1f4 (ENSNGAG00000001403) ENSNGAG00000017588 #21 ENSNGAG00000017761 ##22 ENSNGAG00000018017 ENSNGAG00000008922 #28 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 516 ENSNGAG00000001558 ENSNGAG00000005140 ENSNGAG00000005469 ENSNGAG00000004855 ENSNGAG00000006564 #22 ENSNGAG00000004217 ENSNGAG00000003052 ENSNGAG00000002502 #21 ENSNGAG00000002100 ENSNGAG00000020779 ##22 ENSNGAG00000002211 #28 ENSNGAG00000003563 #21 H2ac24 (ENSNGAG00000003629) ENSNGAG00000001601 #28 ENSNGAG00000018047 ENSNGAG00000016925 Prss16 (ENSNGAG00000017902) ENSNGAG00000018408 ENSNGAG00000001327 ENSNGAG00000018350 #21 Upper Galilee mountains blind mole rat MODERN SPECIES 494 ENSNGAG00000022884 ENSNGAG00000014133 #22 Bbs10 (ENSNGAG00000022298) Osbpl8 (ENSNGAG00000014231) Zdhhc17 (ENSNGAG00000009049) ENSNGAG00000023257 E2f7 (ENSNGAG00000023644) ENSNGAG00000024182 Nav3 (ENSNGAG00000024210) Syt1 (ENSNGAG00000020988) Pawr (ENSNGAG00000015922) Ppp1r12a (ENSNGAG00000023300) ENSNGAG00000024231 Otogl (ENSNGAG00000022483) Ptprq (ENSNGAG00000024172) Myf6 (ENSNGAG00000023390) Myf5 (ENSNGAG00000003539) Upper Galilee mountains blind mole rat MODERN SPECIES 1243 Plekho1 (ENSNGAG00000002001) ENSNGAG00000005098 Vps45 (ENSNGAG00000001159) Otud7b (ENSNGAG00000019612) Mtmr11 (ENSNGAG00000015085) Sf3b4 (ENSNGAG00000016337) Sv2a (ENSNGAG00000024242) Bola1 (ENSNGAG00000024327) H2ac21 (ENSNGAG00000011111) H2ac20 (ENSNGAG00000011075) ENSNGAG00000023599 ENSNGAG00000011353 ENSNGAG00000012728 ENSNGAG00000004233 ##22 ENSNGAG00000020540 ##22 ENSNGAG00000012113 #22 Fcgr1 (ENSNGAG00000016194) Upper Galilee mountains blind mole rat MODERN SPECIES 769 ENSNGAG00000010646 #22 ENSNGAG00000007331 H1f2 (ENSNGAG00000004187) Hfe (ENSNGAG00000016849) ENSNGAG00000010665 #21 H1f6 (ENSNGAG00000010517) ENSNGAG00000017064 ENSNGAG00000019522 H1f4 (ENSNGAG00000001403) ENSNGAG00000017588 #21 ENSNGAG00000017761 ##22 ENSNGAG00000018017 ENSNGAG00000008922 #28 ENSNGAG00000009633 ENSNGAG00000012803 #21 ENSNGAG00000020628 #22 ENSNGAG00000006078 #22 ENSNGAG00000017262 ##22 ENSNGAG00000018828 ENSNGAG00000018460 ENSNGAG00000017676 #21 Btn2a2 (ENSNGAG00000005096) Btn1a1 (ENSNGAG00000016601) Abt1 (ENSNGAG00000011004) Zfp322a (ENSNGAG00000018458) ENSNGAG00000019499 ENSNGAG00000017772 Upper Galilee mountains blind mole rat MODERN SPECIES 769 ENSNGAG00000017772 ENSNGAG00000019499 Zfp322a (ENSNGAG00000018458) Abt1 (ENSNGAG00000011004) Btn1a1 (ENSNGAG00000016601) Btn2a2 (ENSNGAG00000005096) ENSNGAG00000017676 #21 ENSNGAG00000018460 ENSNGAG00000018828 ENSNGAG00000017262 ##22 ENSNGAG00000006078 #22 ENSNGAG00000020628 #22 ENSNGAG00000012803 #21 ENSNGAG00000009633 ENSNGAG00000008922 #28 ENSNGAG00000018017 ENSNGAG00000017761 ##22 ENSNGAG00000017588 #21 H1f4 (ENSNGAG00000001403) ENSNGAG00000019522 ENSNGAG00000017064 H1f6 (ENSNGAG00000010517) ENSNGAG00000010665 #21 Hfe (ENSNGAG00000016849) H1f2 (ENSNGAG00000004187) ENSNGAG00000007331 Muroidea_A ANCESTRAL SPECIES 14 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01100000263514.A.e.a.a.b ENSGT00940000162950 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.a ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263506.a.f.b.p.b ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.a.b.b Murinae ANCESTRAL SPECIES 5 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.b.b ENSGT01060000248528.b.kh.xb.a.b #21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 ENSGT01060000248528.b.kh.yb.a.b #21 ENSGT01100000263559.A.f.e ##22 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Rat DUPLICATION Rat MODERN SPECIES 8 Hist2h4 (ENSRNOG00000054017) #21 Hist1h2ac (ENSRNOG00000070462) ENSRNOG00000066901 #28 ENSRNOG00000067427 ENSRNOG00000068380 AABR07027878.1 (ENSRNOG00000052387) Zfp322a (ENSRNOG00000017318) Abt1 (ENSRNOG00000017585) Btn1a1 (ENSRNOG00000017514) Btn2a2 (ENSRNOG00000038877) Hist1h4m (ENSRNOG00000064025) #21 Hist1h2bg (ENSRNOG00000070362) LOC120097726 (ENSRNOG00000069245) Hist1h3b (ENSRNOG00000068516) LOC100910200 (ENSRNOG00000064011) LOC102548682 (ENSRNOG00000064521) #22 hist1h2ail2 (ENSRNOG00000067434) H4f3 (ENSRNOG00000048264) Hist1h4m (ENSRNOG00000070513) #21 H1f4 (ENSRNOG00000047459) AC130391.3 (ENSRNOG00000053025) Hist1h2bq (ENSRNOG00000069578) H1f6 (ENSRNOG00000061863) Hist1h4m (ENSRNOG00000070706) #21 Hfe (ENSRNOG00000016967) H1f2 (ENSRNOG00000067441) Hist1h2af (ENSRNOG00000022146) H3c13 (ENSRNOG00000065054) ##22 LOC102549173 (ENSRNOG00000066835) ##22 Hist1h4m (ENSRNOG00000065263) #21 Hist1h3b (ENSRNOG00000068614) Rat MODERN SPECIES 11 Ciart (ENSRNOG00000042717) C2H1orf54 (ENSRNOG00000059750) Aph1a (ENSRNOG00000023816) Car14 (ENSRNOG00000023162) Anp32e (ENSRNOG00000021168) RGD1562196 (ENSRNOG00000065202) Plekho1 (ENSRNOG00000021170) Vps45 (ENSRNOG00000021173) Otud7b (ENSRNOG00000042068) Mtmr11 (ENSRNOG00000021176) Sf3b4 (ENSRNOG00000021181) Sv2a (ENSRNOG00000021182) Bola1 (ENSRNOG00000021185) ENSRNOG00000062927 LOC102549173 (ENSRNOG00000068046) ##22 LOC102549173 (ENSRNOG00000065886) #22 Hist1h4b (ENSRNOG00000032224) #21 Hist2h3c2 (ENSRNOG00000063016) ##22 H2bc18 (ENSRNOG00000070591) Fcgr1a (ENSRNOG00000021199) ENSRNOG00000069676 AABR07012587.1 (ENSRNOG00000002223) AABR07012588.1 (ENSRNOG00000059842) Hjv (ENSRNOG00000021200) AABR07012592.1 (ENSRNOG00000037223) Txnip (ENSRNOG00000021201) Polr3gl (ENSRNOG00000021209) ENSRNOG00000069895 Ankrd34a (ENSRNOG00000033741) Lix1l (ENSRNOG00000021213) Rbm8a (ENSRNOG00000021215) Mus ANCESTRAL SPECIES 7 ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.b.b ENSGT01060000248528.b.kh.xb.a.b #21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 ENSGT01060000248528.b.kh.yb.a.b #21 ENSGT01100000263559.A.f.e ##22 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00860000135842 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423.c ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.jh.a.a.a #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ENSGT00940000155501.a.a ENSGT01100000263514.A.f ENSGT00940000155501.a.b ENSGT01060000248528.b.jh.b #21 ENSGT01100000263506.a.f.b.p.b ENSGT01060000248528.b.kh.yb.a.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.a.a.b.a.b.a ENSGT01030000234553.b.b.c.b.a.a.b.a.a.a.a.a.b.b.a ENSGT01030000234553.b.b.c.b.b.c.b.a.b.b ENSGT01030000234553.b.b.c.b.b.c.a.a.b.a.b ENSGT01030000234553.b.b.c.b.b.c.b.b.b ENSGT01030000234553.b.b.c.b.a.a.b.a.a.b.b ENSGT01030000234553.b.b.c.b.b.c.a.a.b.b ENSGT01030000234553.b.b.c.b.a.b.c Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 4 MGP_CAROLIEiJ_G0018320 MGP_CAROLIEiJ_G0018321 MGP_CAROLIEiJ_G0018322 MGP_CAROLIEiJ_G0018323 MGP_CAROLIEiJ_G0018324 #21 MGP_CAROLIEiJ_G0018325 H1f4 (MGP_CAROLIEiJ_G0018326) MGP_CAROLIEiJ_G0018327 H1f6 (MGP_CAROLIEiJ_G0018328) MGP_CAROLIEiJ_G0018329 #21 Hfe (MGP_CAROLIEiJ_G0018330) H1f2 (MGP_CAROLIEiJ_G0018331) MGP_CAROLIEiJ_G0018332 #22 H2bc3 (MGP_CAROLIEiJ_G0018333) MGP_CAROLIEiJ_G0018334 MGP_CAROLIEiJ_G0018335 #22 MGP_CAROLIEiJ_G0018336 #21 MGP_CAROLIEiJ_G0018337 #21 MGP_CAROLIEiJ_G0018338 H1f1 (MGP_CAROLIEiJ_G0018339) Trim38 (MGP_CAROLIEiJ_G0018340) Slc17a2 (MGP_CAROLIEiJ_G0018341) Slc17a3 (MGP_CAROLIEiJ_G0018342) Slc17a1 (MGP_CAROLIEiJ_G0018343) Slc17a4 (MGP_CAROLIEiJ_G0018344) H2bc1 (MGP_CAROLIEiJ_G0018345) ##20 H2ac1 (MGP_CAROLIEiJ_G0018346) Scgn (MGP_CAROLIEiJ_G0018347) Carmil1 (MGP_CAROLIEiJ_G0018348) Cmah (MGP_CAROLIEiJ_G0018349) Ripor2 (MGP_CAROLIEiJ_G0018350) Ryukyu mouse MODERN SPECIES 4 Scgn (MGP_CAROLIEiJ_G0018347) H2ac1 (MGP_CAROLIEiJ_G0018346) H2bc1 (MGP_CAROLIEiJ_G0018345) ##20 Slc17a4 (MGP_CAROLIEiJ_G0018344) Slc17a1 (MGP_CAROLIEiJ_G0018343) Slc17a3 (MGP_CAROLIEiJ_G0018342) Slc17a2 (MGP_CAROLIEiJ_G0018341) Trim38 (MGP_CAROLIEiJ_G0018340) H1f1 (MGP_CAROLIEiJ_G0018339) MGP_CAROLIEiJ_G0018338 MGP_CAROLIEiJ_G0018337 #21 MGP_CAROLIEiJ_G0018336 #21 MGP_CAROLIEiJ_G0018335 #22 MGP_CAROLIEiJ_G0018334 H2bc3 (MGP_CAROLIEiJ_G0018333) MGP_CAROLIEiJ_G0018332 #22 H1f2 (MGP_CAROLIEiJ_G0018331) Hfe (MGP_CAROLIEiJ_G0018330) MGP_CAROLIEiJ_G0018329 #21 H1f6 (MGP_CAROLIEiJ_G0018328) MGP_CAROLIEiJ_G0018327 H1f4 (MGP_CAROLIEiJ_G0018326) MGP_CAROLIEiJ_G0018325 MGP_CAROLIEiJ_G0018324 #21 MGP_CAROLIEiJ_G0018323 MGP_CAROLIEiJ_G0018322 MGP_CAROLIEiJ_G0018321 MGP_CAROLIEiJ_G0018320 H1f3 (MGP_CAROLIEiJ_G0018319) MGP_CAROLIEiJ_G0018318 #21 MGP_CAROLIEiJ_G0018317 Mus_B ANCESTRAL SPECIES 56 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.a.a.b #21 Mus_C ANCESTRAL SPECIES 10 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263514.A.f ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000156302 ENSGT00940000153092.a.a.d.e.a ENSGT01100000263559.B #22 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ENSGT01100000263506.a.e.a.a.a.b.b.a.a.a ENSGT01100000263506.a.f.b.p.b ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000155501.a.a ENSGT00940000155501.a.b ENSGT00940000158017 spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019205 MGP_SPRETEiJ_G0019204 #21 MGP_SPRETEiJ_G0019203 #21 MGP_SPRETEiJ_G0019202 MGP_SPRETEiJ_G0019201 MGP_SPRETEiJ_G0019200 ##22 H1f2 (MGP_SPRETEiJ_G0019199) Hfe (MGP_SPRETEiJ_G0019198) MGP_SPRETEiJ_G0019197 H1f6 (MGP_SPRETEiJ_G0019196) MGP_SPRETEiJ_G0019194 #21 MGP_SPRETEiJ_G0019193 ##22 MGP_SPRETEiJ_G0019192 MGP_SPRETEiJ_G0019191 #28 MGP_SPRETEiJ_G0019190 #28 MGP_SPRETEiJ_G0019189 #22 MGP_SPRETEiJ_G0019188 ##22 MGP_SPRETEiJ_G0019187 MGP_SPRETEiJ_G0019186 #28 MGP_SPRETEiJ_G0019185 MGP_SPRETEiJ_G0019184 Btn2a2 (MGP_SPRETEiJ_G0019183) Btn1a1 (MGP_SPRETEiJ_G0019182) Abt1 (MGP_SPRETEiJ_G0019181) Zfp322a (MGP_SPRETEiJ_G0019180) MGP_SPRETEiJ_G0019179 Vmn1r217 (MGP_SPRETEiJ_G0019178) MGP_SPRETEiJ_G0019177 Vmn1r215 (MGP_SPRETEiJ_G0019176) Vmn1r214 (MGP_SPRETEiJ_G0019175) MGP_SPRETEiJ_G0019174 Steppe mouse MODERN SPECIES 2974 Vmn1r215 (ENSMSIG00000001920) Vmn1r216 (ENSMSIG00000001928) Vmn1r217 (ENSMSIG00000001939) Vmn1r218 (ENSMSIG00000001945) Vmn1r219 (ENSMSIG00000001961) ENSMSIG00000001982 Vmn1r189 (ENSMSIG00000002000) Vmn1r222 (ENSMSIG00000002019) Vmn1r223 (ENSMSIG00000002029) Zfp322a (ENSMSIG00000002077) Abt1 (ENSMSIG00000002096) Btn1a1 (ENSMSIG00000002124) Btn2a2 (ENSMSIG00000002214) ENSMSIG00000002451 #21 H2ac10 (ENSMSIG00000002460) ENSMSIG00000002473 #22 ENSMSIG00000002485 H1f3 (ENSMSIG00000002502) H1f4 (ENSMSIG00000002510) ENSMSIG00000002543 ENSMSIG00000002557 H1f6 (ENSMSIG00000002560) ENSMSIG00000002567 #21 Hfe (ENSMSIG00000002587) Mouse DUPLICATION Mouse DUPLICATION Mouse MODERN SPECIES 4 H3c3 (ENSMUSG00000069310) ##22 H1f2 (ENSMUSG00000036181) Hfe (ENSMUSG00000006611) H4c3 (ENSMUSG00000060678) #21 H1f6 (ENSMUSG00000036211) H2bc4 (ENSMUSG00000018102) H2ac6 (ENSMUSG00000069270) H1f4 (ENSMUSG00000051627) H2bc6 (ENSMUSG00000047246) H4c4 (ENSMUSG00000061482) #21 H3c4 (ENSMUSG00000099583) #22 H2ac7 (ENSMUSG00000071478) H2bc7 (ENSMUSG00000069268) H2bc8 (ENSMUSG00000058385) H2ac8 (ENSMUSG00000069272) H3c6 (ENSMUSG00000069273) #22 H1f3 (ENSMUSG00000052565) H4c6 (ENSMUSG00000069274) #21 H3c7 (ENSMUSG00000100210) #22 H2bc9 (ENSMUSG00000114456) H3c8 (ENSMUSG00000099517) H2ac10 (ENSMUSG00000061991) H4c8 (ENSMUSG00000060981) #21 Btn2a2 (ENSMUSG00000053216) Btn1a1 (ENSMUSG00000000706) Abt1 (ENSMUSG00000036376) Zfp322a (ENSMUSG00000046351) Vmn1r223 (ENSMUSG00000069280) Vmn1r222 (ENSMUSG00000061022) Vmn1r221 (ENSMUSG00000082316) Vmn1r220 (ENSMUSG00000096099) Mouse MODERN SPECIES 4 H2bc7 (ENSMUSG00000069268) H2ac7 (ENSMUSG00000071478) H3c4 (ENSMUSG00000099583) #22 H4c4 (ENSMUSG00000061482) #21 H2bc6 (ENSMUSG00000047246) H1f4 (ENSMUSG00000051627) H2ac6 (ENSMUSG00000069270) H2bc4 (ENSMUSG00000018102) H1f6 (ENSMUSG00000036211) H4c3 (ENSMUSG00000060678) #21 Hfe (ENSMUSG00000006611) H1f2 (ENSMUSG00000036181) H3c3 (ENSMUSG00000069310) ##22 H2bc3 (ENSMUSG00000075031) H2ac4 (ENSMUSG00000061615) H3c2 (ENSMUSG00000069267) #22 H4c2 (ENSMUSG00000069266) #21 H4c1 (ENSMUSG00000060093) #21 H3c1 (ENSMUSG00000069265) H1f1 (ENSMUSG00000049539) Trim38 (ENSMUSG00000064140) Slc17a2 (ENSMUSG00000036110) Slc17a3 (ENSMUSG00000036083) Slc17a1 (ENSMUSG00000021335) Slc17a4 (ENSMUSG00000021336) H2bc1 (ENSMUSG00000050799) ##20 H2ac1 (ENSMUSG00000060081) Scgn (ENSMUSG00000021337) Carmil1 (ENSMUSG00000021338) Cmah (ENSMUSG00000016756) Ripor2 (ENSMUSG00000036006) Mouse MODERN SPECIES 4 Vmn1r217 (ENSMUSG00000115791) Vmn1r218 (ENSMUSG00000115020) Vmn1r219 (ENSMUSG00000061376) Vmn1r220 (ENSMUSG00000096099) Vmn1r221 (ENSMUSG00000082316) Vmn1r222 (ENSMUSG00000061022) Vmn1r223 (ENSMUSG00000069280) Zfp322a (ENSMUSG00000046351) Abt1 (ENSMUSG00000036376) Btn1a1 (ENSMUSG00000000706) Btn2a2 (ENSMUSG00000053216) H4c8 (ENSMUSG00000060981) #21 H2ac10 (ENSMUSG00000061991) H3c8 (ENSMUSG00000099517) H2bc9 (ENSMUSG00000114456) H3c7 (ENSMUSG00000100210) #22 H4c6 (ENSMUSG00000069274) #21 H1f3 (ENSMUSG00000052565) H3c6 (ENSMUSG00000069273) #22 H2ac8 (ENSMUSG00000069272) H2bc8 (ENSMUSG00000058385) H2bc7 (ENSMUSG00000069268) H2ac7 (ENSMUSG00000071478) H3c4 (ENSMUSG00000099583) #22 H4c4 (ENSMUSG00000061482) #21 H2bc6 (ENSMUSG00000047246) H1f4 (ENSMUSG00000051627) H2ac6 (ENSMUSG00000069270) H2bc4 (ENSMUSG00000018102) H1f6 (ENSMUSG00000036211) H4c3 (ENSMUSG00000060678) #21 Mouse MODERN SPECIES 4 Abt1 (ENSMUSG00000036376) Btn1a1 (ENSMUSG00000000706) Btn2a2 (ENSMUSG00000053216) H4c8 (ENSMUSG00000060981) #21 H2ac10 (ENSMUSG00000061991) H3c8 (ENSMUSG00000099517) H2bc9 (ENSMUSG00000114456) H3c7 (ENSMUSG00000100210) #22 H4c6 (ENSMUSG00000069274) #21 H1f3 (ENSMUSG00000052565) H3c6 (ENSMUSG00000069273) #22 H2ac8 (ENSMUSG00000069272) H2bc8 (ENSMUSG00000058385) H2bc7 (ENSMUSG00000069268) H2ac7 (ENSMUSG00000071478) H3c4 (ENSMUSG00000099583) #22 H4c4 (ENSMUSG00000061482) #21 H2bc6 (ENSMUSG00000047246) H1f4 (ENSMUSG00000051627) H2ac6 (ENSMUSG00000069270) H2bc4 (ENSMUSG00000018102) H1f6 (ENSMUSG00000036211) H4c3 (ENSMUSG00000060678) #21 Hfe (ENSMUSG00000006611) H1f2 (ENSMUSG00000036181) H3c3 (ENSMUSG00000069310) ##22 H2bc3 (ENSMUSG00000075031) H2ac4 (ENSMUSG00000061615) H3c2 (ENSMUSG00000069267) #22 H4c2 (ENSMUSG00000069266) #21 H4c1 (ENSMUSG00000060093) #21 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019383 #22 MGP_PahariEiJ_G0019384 ##22 MGP_PahariEiJ_G0019385 MGP_PahariEiJ_G0019386 MGP_PahariEiJ_G0019387 #21 MGP_PahariEiJ_G0019388 H1f4 (MGP_PahariEiJ_G0019389) MGP_PahariEiJ_G0019390 H1f6 (MGP_PahariEiJ_G0019391) MGP_PahariEiJ_G0019392 #21 Hfe (MGP_PahariEiJ_G0019393) H1f2 (MGP_PahariEiJ_G0019394) MGP_PahariEiJ_G0019395 ##22 H2bc3 (MGP_PahariEiJ_G0019396) MGP_PahariEiJ_G0019397 MGP_PahariEiJ_G0019398 #22 MGP_PahariEiJ_G0019399 #21 MGP_PahariEiJ_G0019400 #21 MGP_PahariEiJ_G0019401 H1f1 (MGP_PahariEiJ_G0019402) Trim38 (MGP_PahariEiJ_G0019403) Slc17a2 (MGP_PahariEiJ_G0019404) Slc17a3 (MGP_PahariEiJ_G0019405) Slc17a1 (MGP_PahariEiJ_G0019406) Slc17a4 (MGP_PahariEiJ_G0019407) H2bc1 (MGP_PahariEiJ_G0019408) ##20 H2ac1 (MGP_PahariEiJ_G0019409) Scgn (MGP_PahariEiJ_G0019410) Carmil1 (MGP_PahariEiJ_G0019411) Cmah (MGP_PahariEiJ_G0019412) Ripor2 (MGP_PahariEiJ_G0019413) Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019398 #22 MGP_PahariEiJ_G0019397 H2bc3 (MGP_PahariEiJ_G0019396) MGP_PahariEiJ_G0019395 ##22 H1f2 (MGP_PahariEiJ_G0019394) Hfe (MGP_PahariEiJ_G0019393) MGP_PahariEiJ_G0019392 #21 H1f6 (MGP_PahariEiJ_G0019391) MGP_PahariEiJ_G0019390 H1f4 (MGP_PahariEiJ_G0019389) MGP_PahariEiJ_G0019388 MGP_PahariEiJ_G0019387 #21 MGP_PahariEiJ_G0019386 MGP_PahariEiJ_G0019385 MGP_PahariEiJ_G0019384 ##22 MGP_PahariEiJ_G0019383 #22 H1f3 (MGP_PahariEiJ_G0019382) MGP_PahariEiJ_G0019381 #21 MGP_PahariEiJ_G0019380 MGP_PahariEiJ_G0019379 #21 Btn2a2 (MGP_PahariEiJ_G0019378) Btn1a1 (MGP_PahariEiJ_G0019377) Abt1 (MGP_PahariEiJ_G0019376) Zfp322a (MGP_PahariEiJ_G0019375) Vmn1r223 (MGP_PahariEiJ_G0019374) MGP_PahariEiJ_G0019373 MGP_PahariEiJ_G0019372 MGP_PahariEiJ_G0019371 MGP_PahariEiJ_G0019370 MGP_PahariEiJ_G0019369 MGP_PahariEiJ_G0019368 Shrew mouse MODERN SPECIES 17 MGP_PahariEiJ_G0026804 Plekho1 (MGP_PahariEiJ_G0026805) Vps45 (MGP_PahariEiJ_G0026806) Otud7b (MGP_PahariEiJ_G0026807) Mtmr11 (MGP_PahariEiJ_G0026808) Sf3b4 (MGP_PahariEiJ_G0026809) Sv2a (MGP_PahariEiJ_G0026810) Bola1 (MGP_PahariEiJ_G0026811) H2ac21 (MGP_PahariEiJ_G0026812) H2ac20 (MGP_PahariEiJ_G0026813) MGP_PahariEiJ_G0026815 MGP_PahariEiJ_G0026814 H2bc21 (MGP_PahariEiJ_G0026816) MGP_PahariEiJ_G0026817 #21 MGP_PahariEiJ_G0026818 ##22 MGP_PahariEiJ_G0026819 #22 H2bc18 (MGP_PahariEiJ_G0026820) Fcgr1 (MGP_PahariEiJ_G0026821) Hjv (MGP_PahariEiJ_G0026822) Txnip (MGP_PahariEiJ_G0026823) MGP_PahariEiJ_G0026824 Polr3gl (MGP_PahariEiJ_G0026825) Ankrd34a (MGP_PahariEiJ_G0026826) Lix1l (MGP_PahariEiJ_G0026827) MGP_PahariEiJ_G0026828 Pex11b (MGP_PahariEiJ_G0026829) MGP_PahariEiJ_G0026830 Itga10 (MGP_PahariEiJ_G0026831) Ankrd35 (MGP_PahariEiJ_G0026832) Pias3 (MGP_PahariEiJ_G0026833) Nudt17 (MGP_PahariEiJ_G0026834) Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b.b ENSGT01060000248528.b.jh.b #21 ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263506.a.e.a.a.a.a.b.a.d ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ENSGT00940000153092.a.b.f.c.a ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ENSGT01100000263514.A.e.a.a.b Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b.a ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.a.a.b.b.b ENSGT01030000234553.b.b.c.b.b.c.a.a.b ENSGT01030000234553.b.b.c.b.b.c.b Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001008076 #21 ENSCGRG00001009204 ENSCGRG00001010597 ENSCGRG00001013659 ENSCGRG00001018578 H1f4 (ENSCGRG00001009883) ENSCGRG00001008121 ENSCGRG00001010735 H1f6 (ENSCGRG00001008610) ENSCGRG00001010840 #21 Hfe (ENSCGRG00001022484) H1f2 (ENSCGRG00001009982) ENSCGRG00001012092 #22 ENSCGRG00001012930 #28 ENSCGRG00001010154 ENSCGRG00001011199 #22 ENSCGRG00001022542 #21 ENSCGRG00001001443 #21 ENSCGRG00001011455 H1f1 (ENSCGRG00001010065) Trim38 (ENSCGRG00001003323) Slc17a2 (ENSCGRG00001011821) Slc17a3 (ENSCGRG00001002510) Slc17a1 (ENSCGRG00001016831) Slc17a4 (ENSCGRG00001016183) H2bc1 (ENSCGRG00001007520) ##20 H2ac1 (ENSCGRG00001009534) Scgn (ENSCGRG00001001150) Carmil1 (ENSCGRG00001019506) ENSCGRG00001013190 Cmah (ENSCGRG00001015567) Chinese hamster chok1gshd MODERN SPECIES 317 Scgn (ENSCGRG00001001150) H2ac1 (ENSCGRG00001009534) H2bc1 (ENSCGRG00001007520) ##20 Slc17a4 (ENSCGRG00001016183) Slc17a1 (ENSCGRG00001016831) Slc17a3 (ENSCGRG00001002510) Slc17a2 (ENSCGRG00001011821) Trim38 (ENSCGRG00001003323) H1f1 (ENSCGRG00001010065) ENSCGRG00001011455 ENSCGRG00001001443 #21 ENSCGRG00001022542 #21 ENSCGRG00001011199 #22 ENSCGRG00001010154 ENSCGRG00001012930 #28 ENSCGRG00001012092 #22 H1f2 (ENSCGRG00001009982) Hfe (ENSCGRG00001022484) ENSCGRG00001010840 #21 H1f6 (ENSCGRG00001008610) ENSCGRG00001010735 ENSCGRG00001008121 H1f4 (ENSCGRG00001009883) ENSCGRG00001018578 ENSCGRG00001013659 ENSCGRG00001010597 ENSCGRG00001009204 ENSCGRG00001008076 #21 ENSCGRG00001002972 ENSCGRG00001003737 ENSCGRG00001008834 ##22 Chinese hamster chok1gshd MODERN SPECIES 66 ENSCGRG00001022251 ENSCGRG00001017709 Plekho1 (ENSCGRG00001011990) Vps45 (ENSCGRG00001024791) Otud7b (ENSCGRG00001023406) Mtmr11 (ENSCGRG00001016961) Sf3b4 (ENSCGRG00001003590) Sv2a (ENSCGRG00001020508) Bola1 (ENSCGRG00001011268) H2ac21 (ENSCGRG00001011919) ENSCGRG00001009965 ENSCGRG00001011428 ENSCGRG00001010190 ##22 ENSCGRG00001010788 ENSCGRG00001009035 ENSCGRG00001009755 #22 ENSCGRG00001009153 #21 ENSCGRG00001009937 ##22 H2bc18 (ENSCGRG00001006172) ENSCGRG00001019293 Hjv (ENSCGRG00001009674) Txnip (ENSCGRG00001010170) Polr3gl (ENSCGRG00001023956) Ankrd34a (ENSCGRG00001006698) Lix1l (ENSCGRG00001012733) ENSCGRG00001002681 Pex11b (ENSCGRG00001007975) Itga10 (ENSCGRG00001010836) Ankrd35 (ENSCGRG00001015237) Pias3 (ENSCGRG00001023567) Nudt17 (ENSCGRG00001018476) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT00940000165934 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.a.a.b.b.b ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a.u ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Prairie vole MODERN SPECIES 8 BC028528 (ENSMOCG00000003466) Aph1a (ENSMOCG00000022720) Car14 (ENSMOCG00000014152) Anp32e (ENSMOCG00000002258) Plekho1 (ENSMOCG00000016679) Vps45 (ENSMOCG00000014888) Otud7b (ENSMOCG00000005067) Mtmr11 (ENSMOCG00000017943) ENSMOCG00000013658 Sv2a (ENSMOCG00000000375) Bola1 (ENSMOCG00000016236) H2ac21 (ENSMOCG00000008450) ENSMOCG00000007571 ENSMOCG00000002051 ENSMOCG00000008702 ENSMOCG00000008172 #22 ENSMOCG00000014664 ##22 H2bc18 (ENSMOCG00000007133) Fcgr1 (ENSMOCG00000016687) ENSMOCG00000000933 Kirrel (ENSMOCG00000022496) Fcrls (ENSMOCG00000011149) ENSMOCG00000022843 ENSMOCG00000007905 Cd5l (ENSMOCG00000014684) ENSMOCG00000018610 Fcrl5 (ENSMOCG00000016593) ENSMOCG00000020841 Etv3 (ENSMOCG00000016504) ENSMOCG00000011380 ENSMOCG00000007988 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000027552 ENSPEMG00000027714 #28 ENSPEMG00000029874 ##22 H1f2 (ENSPEMG00000008138) Hfe (ENSPEMG00000010389) ENSPEMG00000025646 #21 H1f6 (ENSPEMG00000009339) ENSPEMG00000031080 ENSPEMG00000030798 H1f4 (ENSPEMG00000030581) ENSPEMG00000028094 #28 ENSPEMG00000028544 #21 ENSPEMG00000031078 ENSPEMG00000029970 ENSPEMG00000028679 ENSPEMG00000027534 #22 H1f3 (ENSPEMG00000005204) ENSPEMG00000028580 #21 ENSPEMG00000027012 ENSPEMG00000028518 ENSPEMG00000030707 #21 Btn2a2 (ENSPEMG00000008235) ENSPEMG00000027518 Btn1a1 (ENSPEMG00000018352) Abt1 (ENSPEMG00000000185) Zfp322a (ENSPEMG00000017154) ENSPEMG00000029419 ENSPEMG00000031388 ENSPEMG00000031350 Prl3c1 (ENSPEMG00000006701) Prl3b1 (ENSPEMG00000021040) Northern American deer mouse MODERN SPECIES 19 Ankrd35 (ENSPEMG00000005629) Itga10 (ENSPEMG00000009215) Pex11b (ENSPEMG00000030984) ENSPEMG00000018117 Lix1l (ENSPEMG00000009747) Ankrd34a (ENSPEMG00000018493) Polr3gl (ENSPEMG00000014489) Txnip (ENSPEMG00000010784) Hjv (ENSPEMG00000016694) ENSPEMG00000029146 Fcgr1 (ENSPEMG00000010092) H2bc18 (ENSPEMG00000026346) ENSPEMG00000030275 ##22 ENSPEMG00000030515 #21 ENSPEMG00000024811 ENSPEMG00000026231 #22 H2bc21 (ENSPEMG00000026085) H2ac20 (ENSPEMG00000008763) H2ac21 (ENSPEMG00000025720) Bola1 (ENSPEMG00000008051) Sv2a (ENSPEMG00000008887) Sf3b4 (ENSPEMG00000017568) Mtmr11 (ENSPEMG00000014402) Otud7b (ENSPEMG00000027312) ENSPEMG00000030134 Vps45 (ENSPEMG00000018774) Plekho1 (ENSPEMG00000015477) Anp32e (ENSPEMG00000000742) Car14 (ENSPEMG00000011085) Aph1a (ENSPEMG00000015896) BC028528 (ENSPEMG00000009975) Rodentia_A ANCESTRAL SPECIES ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT00940000160426 ENSGT01100000263559.A.f.e ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a Hystricomorpha ANCESTRAL SPECIES 42 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.a ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468.e.a.b ENSGT00940000160468.e.b ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT00940000153125.F.g ENSGT00940000155501.a.a ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT00940000162956 ENSGT01090000260018.D.d.b ENSGT01050000244828.c.b.b.a.a.b Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.a ##20 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468.e.a.b ENSGT00940000160468.e.b ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 ENSGT01090000260018.D.d.b ENSGT01050000244828.c.b.b.a.a.b Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468.e.a.b ENSGT00940000160468.e.b ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153118.db.a.a.a ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.a.s ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263559.B #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 190 ENSCLAG00000017561 #21 ENSCLAG00000017508 #21 ENSCLAG00000002673 ##22 ENSCLAG00000017485 H2BC3 (ENSCLAG00000002412) ENSCLAG00000017519 ENSCLAG00000017481 #22 H1-2 (ENSCLAG00000017517) HFE (ENSCLAG00000002257) ENSCLAG00000017464 #21 H2BC4 (ENSCLAG00000001916) ENSCLAG00000001902 ENSCLAG00000017500 ENSCLAG00000017446 #21 ENSCLAG00000017451 #20 ENSCLAG00000017593 #22 ENSCLAG00000017552 #21 H1-3 (ENSCLAG00000017591) ENSCLAG00000017582 #21 ENSCLAG00000003650 #21 ENSCLAG00000017549 ENSCLAG00000017522 ENSCLAG00000017576 ENSCLAG00000017484 ENSCLAG00000017472 #21 ENSCLAG00000002266 ENSCLAG00000002105 ENSCLAG00000002060 ENSCLAG00000002034 ABT1 (ENSCLAG00000002238) ENSCLAG00000001984 Long-tailed chinchilla MODERN SPECIES 172 ENSCLAG00000007653 SERPINB1 (ENSCLAG00000008637) WRNIP1 (ENSCLAG00000006960) MYLK4 (ENSCLAG00000007226) GMDS (ENSCLAG00000002602) FOXF2 (ENSCLAG00000002746) EXOC2 (ENSCLAG00000003072) IRF4 (ENSCLAG00000004136) DUSP22 (ENSCLAG00000004363) ENSCLAG00000002521 ENSCLAG00000002610 ENSCLAG00000002803 ENSCLAG00000001962 #28 PRSS16 (ENSCLAG00000002074) ENSCLAG00000002094 ENSCLAG00000017554 #22 ENSCLAG00000017470 H1-5 (ENSCLAG00000017511) ENSCLAG00000017473 ENSCLAG00000017507 OR2B6 (ENSCLAG00000002828) ENSCLAG00000002900 ENSCLAG00000002954 ZKSCAN8 (ENSCLAG00000006077) ZSCAN9 (ENSCLAG00000006959) ZSCAN26 (ENSCLAG00000007145) ENSCLAG00000007320 ENSCLAG00000007627 ENSCLAG00000007907 GPX6 (ENSCLAG00000008015) ENSCLAG00000008444 Long-tailed chinchilla MODERN SPECIES 190 SLC17A4 (ENSCLAG00000002246) SLC17A1 (ENSCLAG00000002155) SLC17A3 (ENSCLAG00000002031) SLC17A2 (ENSCLAG00000001995) ENSCLAG00000001954 ENSCLAG00000001925 ENSCLAG00000003371 H1-1 (ENSCLAG00000017524) ENSCLAG00000002704 ENSCLAG00000017561 #21 ENSCLAG00000017508 #21 ENSCLAG00000002673 ##22 ENSCLAG00000017485 H2BC3 (ENSCLAG00000002412) ENSCLAG00000017519 ENSCLAG00000017481 #22 H1-2 (ENSCLAG00000017517) HFE (ENSCLAG00000002257) ENSCLAG00000017464 #21 H2BC4 (ENSCLAG00000001916) ENSCLAG00000001902 ENSCLAG00000017500 ENSCLAG00000017446 #21 ENSCLAG00000017451 #20 ENSCLAG00000017593 #22 ENSCLAG00000017552 #21 H1-3 (ENSCLAG00000017591) ENSCLAG00000017582 #21 ENSCLAG00000003650 #21 ENSCLAG00000017549 ENSCLAG00000017522 Degu DUPLICATION Degu MODERN SPECIES 64 ENSODEG00000007557 FOXC1 (ENSODEG00000006912) FOXF2 (ENSODEG00000007607) EXOC2 (ENSODEG00000006797) ENSODEG00000019672 IRF4 (ENSODEG00000007674) DUSP22 (ENSODEG00000006703) ENSODEG00000007570 ENSODEG00000006390 ENSODEG00000006799 ENSODEG00000019618 #28 ENSODEG00000019561 ENSODEG00000019617 PRSS16 (ENSODEG00000007095) ZNF184 (ENSODEG00000008565) ENSODEG00000019426 #22 ENSODEG00000019469 ENSODEG00000019585 ENSODEG00000019548 ENSODEG00000019596 ENSODEG00000007819 ENSODEG00000019425 #22 ENSODEG00000019545 #20 ENSODEG00000019470 ENSODEG00000008174 ZKSCAN8 (ENSODEG00000006772) ENSODEG00000008300 ZSCAN26 (ENSODEG00000007414) ENSODEG00000008481 ENSODEG00000010310 ENSODEG00000009823 Degu MODERN SPECIES 160 ABT1 (ENSODEG00000014676) BTN1A1 (ENSODEG00000013656) BTN2A2 (ENSODEG00000013492) ENSODEG00000020041 ENSODEG00000014935 ENSODEG00000015343 #21 ENSODEG00000013504 ##22 ENSODEG00000013667 #22 ENSODEG00000013885 ##22 ENSODEG00000013815 #21 ENSODEG00000013335 #21 ENSODEG00000015259 #21 ENSODEG00000013294 ENSODEG00000013476 HFE (ENSODEG00000015440) ENSODEG00000013990 #22 H1-1 (ENSODEG00000020218) ENSODEG00000020110 ENSODEG00000020246 SLC17A2 (ENSODEG00000013372) SLC17A3 (ENSODEG00000013677) SLC17A1 (ENSODEG00000014265) SLC17A4 (ENSODEG00000014939) ENSODEG00000020202 ##20 H2AC1 (ENSODEG00000020076) SCGN (ENSODEG00000013580) CARMIL1 (ENSODEG00000014381) ENSODEG00000020125 ENSODEG00000014566 RIPOR2 (ENSODEG00000013706) GMNN (ENSODEG00000015221) Degu MODERN SPECIES 160 OR14J1 (ENSODEG00000020074) ENSODEG00000013745 ENSODEG00000012723 ENSODEG00000012485 ABT1 (ENSODEG00000014676) BTN1A1 (ENSODEG00000013656) BTN2A2 (ENSODEG00000013492) ENSODEG00000020041 ENSODEG00000014935 ENSODEG00000015343 #21 ENSODEG00000013504 ##22 ENSODEG00000013667 #22 ENSODEG00000013885 ##22 ENSODEG00000013815 #21 ENSODEG00000013335 #21 ENSODEG00000015259 #21 ENSODEG00000013294 ENSODEG00000013476 HFE (ENSODEG00000015440) ENSODEG00000013990 #22 H1-1 (ENSODEG00000020218) ENSODEG00000020110 ENSODEG00000020246 SLC17A2 (ENSODEG00000013372) SLC17A3 (ENSODEG00000013677) SLC17A1 (ENSODEG00000014265) SLC17A4 (ENSODEG00000014939) Degu MODERN SPECIES 64 TRIM27 (ENSODEG00000008147) ENSODEG00000008830 ENSODEG00000008110 GPX6 (ENSODEG00000008209) ENSODEG00000009823 ENSODEG00000010310 ENSODEG00000008481 ZSCAN26 (ENSODEG00000007414) ENSODEG00000008300 ZKSCAN8 (ENSODEG00000006772) ENSODEG00000008174 ENSODEG00000019470 ENSODEG00000019545 #20 ENSODEG00000019425 #22 ENSODEG00000007819 ENSODEG00000019596 ENSODEG00000019548 ENSODEG00000019585 ENSODEG00000019469 ENSODEG00000019426 #22 ZNF184 (ENSODEG00000008565) PRSS16 (ENSODEG00000007095) ENSODEG00000019617 ENSODEG00000019561 ENSODEG00000019618 #28 ENSODEG00000006799 ENSODEG00000006390 ENSODEG00000007570 DUSP22 (ENSODEG00000006703) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000006505 ENSHGLG00000048321 ENSHGLG00000043363 ##20 ENSHGLG00000039281 #28 ENSHGLG00000040977 HIST1H4I (ENSHGLG00000051005) #21 ENSHGLG00000038626 H1-4 (ENSHGLG00000045582) ENSHGLG00000040023 ENSHGLG00000033074 ENSHGLG00000006448 HIST1H1C (ENSHGLG00000049913) ENSHGLG00000042839 #22 ENSHGLG00000037809 ENSHGLG00000042136 ENSHGLG00000033295 #22 HIST1H4I (ENSHGLG00000049339) #21 ENSHGLG00000045417 ENSHGLG00000020348 ENSHGLG00000032839 ENSHGLG00000037734 ENSHGLG00000048095 MBOAT1 (ENSHGLG00000005633) ENSHGLG00000043782 E2F3 (ENSHGLG00000004868) CDKAL1 (ENSHGLG00000004810) SOX4 (ENSHGLG00000046025) ENSHGLG00000041083 ENSHGLG00000039675 ENSHGLG00000046839 ENSHGLG00000004393 Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000041083 SOX4 (ENSHGLG00000046025) CDKAL1 (ENSHGLG00000004810) E2F3 (ENSHGLG00000004868) ENSHGLG00000043782 MBOAT1 (ENSHGLG00000005633) ENSHGLG00000048095 ENSHGLG00000037734 ENSHGLG00000032839 ENSHGLG00000020348 ENSHGLG00000045417 HIST1H4I (ENSHGLG00000049339) #21 ENSHGLG00000033295 #22 ENSHGLG00000042136 ENSHGLG00000037809 ENSHGLG00000042839 #22 HIST1H1C (ENSHGLG00000049913) ENSHGLG00000006448 ENSHGLG00000033074 ENSHGLG00000040023 H1-4 (ENSHGLG00000045582) ENSHGLG00000038626 HIST1H4I (ENSHGLG00000051005) #21 ENSHGLG00000040977 ENSHGLG00000039281 #28 ENSHGLG00000043363 ##20 ENSHGLG00000048321 ENSHGLG00000006505 ENSHGLG00000045351 HIST1H4I (ENSHGLG00000047844) #21 ENSHGLG00000004694 ##22 Sciuridae ANCESTRAL SPECIES 1 ENSGT01100000263575.A ENSGT01100000263575.B.t.a.b ENSGT00940000156302 ENSGT01100000263559.A.f.e ##22 ENSGT00940000153118.db.b ENSGT01060000248528.b.jh.a.a.a #21 ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000153118.db.a.a.a ENSGT01100000263795 ENSGT00940000155501.a.b ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.b ENSGT00990000203553.c.b ENSGT01100000263514.A.e.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000160894 ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 ENSGT00940000153717.a.a Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005013576 CARMIL1 (ENSSVLG00005013714) SCGN (ENSSVLG00005013776) H2AC1 (ENSSVLG00005013853) H2BC1 (ENSSVLG00005013920) ##20 SLC17A4 (ENSSVLG00005014018) SLC17A2 (ENSSVLG00005014276) TRIM38 (ENSSVLG00005014574) H1-1 (ENSSVLG00005014688) ENSSVLG00005014701 ENSSVLG00005014727 #21 ENSSVLG00005014742 #21 ENSSVLG00005014761 #22 H2AC4 (ENSSVLG00005014779) H2BC3 (ENSSVLG00005014798) ENSSVLG00005014821 #22 H1-2 (ENSSVLG00005014836) ENSSVLG00005014863 ENSSVLG00005014988 #21 ENSSVLG00005015008 ENSSVLG00005015027 #19 ENSSVLG00005015136 ENSSVLG00005015579 #21 H1-6 (ENSSVLG00005015594) H2BC4 (ENSSVLG00005015614) H2AC6 (ENSSVLG00005015625) H1-4 (ENSSVLG00005015645) ENSSVLG00005015665 #28 ENSSVLG00005015689 #28 ENSSVLG00005015745 #21 ENSSVLG00005015768 ##22 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005015665 #28 H1-4 (ENSSVLG00005015645) H2AC6 (ENSSVLG00005015625) H2BC4 (ENSSVLG00005015614) H1-6 (ENSSVLG00005015594) ENSSVLG00005015579 #21 ENSSVLG00005015136 ENSSVLG00005015027 #19 ENSSVLG00005015008 ENSSVLG00005014988 #21 ENSSVLG00005014863 H1-2 (ENSSVLG00005014836) ENSSVLG00005014821 #22 H2BC3 (ENSSVLG00005014798) H2AC4 (ENSSVLG00005014779) ENSSVLG00005014761 #22 ENSSVLG00005014742 #21 ENSSVLG00005014727 #21 ENSSVLG00005014701 H1-1 (ENSSVLG00005014688) TRIM38 (ENSSVLG00005014574) SLC17A2 (ENSSVLG00005014276) SLC17A4 (ENSSVLG00005014018) H2BC1 (ENSSVLG00005013920) ##20 H2AC1 (ENSSVLG00005013853) SCGN (ENSSVLG00005013776) CARMIL1 (ENSSVLG00005013714) ENSSVLG00005013576 RIPOR2 (ENSSVLG00005012986) ARMH2 (ENSSVLG00005012864) GMNN (ENSSVLG00005012824) Marmotini ANCESTRAL SPECIES 40 ENSGT00530000068834 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ##20 ENSGT01100000263506.a.f.b ENSGT00940000160894 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.a.b ENSGT00990000203553.c.b ENSGT01100000263575.A ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.b ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01060000248528.b.jh.a.b #21 ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 Marmotini_b ANCESTRAL SPECIES 109 ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT00940000164849 ENSGT00940000160281 ENSGT00940000153125.A ENSGT00940000162956 ENSGT00390000002062 ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000162723 ENSGT01100000263506.a.e.a.a.a.b.b.a.b ENSGT00940000163525 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.b ENSGT00990000203553.c.b ENSGT01100000263514.A.e.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000160894 ENSGT01100000263506.a.f.b ENSGT01100000263474.a.a.c.b ##20 ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 367 ENSUPAG00010005871 H1-3 (ENSUPAG00010005873) ENSUPAG00010005882 ENSUPAG00010005884 #22 ENSUPAG00010005886 #21 H1-4 (ENSUPAG00010005887) H2AC6 (ENSUPAG00010005895) ENSUPAG00010005897 H1-6 (ENSUPAG00010005899) ENSUPAG00010005901 #21 HFE (ENSUPAG00010005903) H1-2 (ENSUPAG00010005911) ENSUPAG00010005912 #22 H2BC3 (ENSUPAG00010005915) ENSUPAG00010005917 ENSUPAG00010005920 #22 ENSUPAG00010005923 #21 ENSUPAG00010005925 ENSUPAG00010005927 H1-1 (ENSUPAG00010005929) TRIM38 (ENSUPAG00010005930) SLC17A2 (ENSUPAG00010005933) SLC17A4 (ENSUPAG00010005946) ENSUPAG00010005968 H2BC1 (ENSUPAG00010005971) ##20 H2AC1 (ENSUPAG00010005977) ENSUPAG00010005978 CARMIL1 (ENSUPAG00010005987) ENSUPAG00010006140 RIPOR2 (ENSUPAG00010006182) ARMH2 (ENSUPAG00010006215) Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 367 CARMIL1 (ENSUPAG00010005987) ENSUPAG00010005978 H2AC1 (ENSUPAG00010005977) H2BC1 (ENSUPAG00010005971) ##20 ENSUPAG00010005968 SLC17A4 (ENSUPAG00010005946) SLC17A2 (ENSUPAG00010005933) TRIM38 (ENSUPAG00010005930) H1-1 (ENSUPAG00010005929) ENSUPAG00010005927 ENSUPAG00010005925 ENSUPAG00010005923 #21 ENSUPAG00010005920 #22 ENSUPAG00010005917 H2BC3 (ENSUPAG00010005915) ENSUPAG00010005912 #22 H1-2 (ENSUPAG00010005911) HFE (ENSUPAG00010005903) ENSUPAG00010005901 #21 H1-6 (ENSUPAG00010005899) ENSUPAG00010005897 H2AC6 (ENSUPAG00010005895) H1-4 (ENSUPAG00010005887) ENSUPAG00010005886 #21 ENSUPAG00010005884 #22 ENSUPAG00010005882 H1-3 (ENSUPAG00010005873) ENSUPAG00010005871 ENSUPAG00010005869 ENSUPAG00010005866 ENSUPAG00010005865 Arctic ground squirrel MODERN SPECIES 367 ZNF322 (ENSUPAG00010005538) ABT1 (ENSUPAG00010005543) BTN1A1 (ENSUPAG00010005549) ENSUPAG00010005833 ENSUPAG00010005837 ENSUPAG00010005862 #21 ENSUPAG00010005865 ENSUPAG00010005866 ENSUPAG00010005869 ENSUPAG00010005871 H1-3 (ENSUPAG00010005873) ENSUPAG00010005882 ENSUPAG00010005884 #22 ENSUPAG00010005886 #21 H1-4 (ENSUPAG00010005887) H2AC6 (ENSUPAG00010005895) ENSUPAG00010005897 H1-6 (ENSUPAG00010005899) ENSUPAG00010005901 #21 HFE (ENSUPAG00010005903) H1-2 (ENSUPAG00010005911) ENSUPAG00010005912 #22 H2BC3 (ENSUPAG00010005915) ENSUPAG00010005917 ENSUPAG00010005920 #22 ENSUPAG00010005923 #21 ENSUPAG00010005925 ENSUPAG00010005927 Arctic ground squirrel MODERN SPECIES 630 ENSUPAG00010012083 ENSUPAG00010012075 ENSUPAG00010012068 ENSUPAG00010012062 ENSUPAG00010012055 ENSUPAG00010012049 ENSUPAG00010012024 ENSUPAG00010012019 ENSUPAG00010012005 ENSUPAG00010011996 ENSUPAG00010011989 ENSUPAG00010011977 ENSUPAG00010011971 ENSUPAG00010011966 ENSUPAG00010011960 ENSUPAG00010011956 #22 ENSUPAG00010011953 ENSUPAG00010011950 #21 ENSUPAG00010011944 #28 ENSUPAG00010011938 H1-5 (ENSUPAG00010011937) ENSUPAG00010011929 ENSUPAG00010011928 ENSUPAG00010011908 #21 ENSUPAG00010011906 ENSUPAG00010011892 Arctic ground squirrel MODERN SPECIES 946 ENSUPAG00010001610 #21 ENSUPAG00010001606 #22 H2BC18 (ENSUPAG00010001593) FCGR1A (ENSUPAG00010001577) ENSUPAG00010001553 ENSUPAG00010001521 ENSUPAG00010001484 Squirrel DUPLICATION Squirrel MODERN SPECIES 180 C1orf54 (ENSSTOG00000006055) APH1A (ENSSTOG00000006041) CA14 (ENSSTOG00000027815) ENSSTOG00000004170 PLEKHO1 (ENSSTOG00000014249) VPS45 (ENSSTOG00000014236) OTUD7B (ENSSTOG00000026621) MTMR11 (ENSSTOG00000006589) ENSSTOG00000000684 SV2A (ENSSTOG00000006537) H2AC21 (ENSSTOG00000021582) H2AC20 (ENSSTOG00000025400) H2BC21 (ENSSTOG00000028429) ENSSTOG00000022473 ENSSTOG00000030339 #22 ENSSTOG00000028762 #22 FCGR1A (ENSSTOG00000028518) ENSSTOG00000031290 ENSSTOG00000027412 Squirrel MODERN SPECIES 180 ENSSTOG00000027412 ENSSTOG00000031290 FCGR1A (ENSSTOG00000028518) ENSSTOG00000028762 #22 ENSSTOG00000030339 #22 ENSSTOG00000022473 H2BC21 (ENSSTOG00000028429) H2AC20 (ENSSTOG00000025400) H2AC21 (ENSSTOG00000021582) SV2A (ENSSTOG00000006537) ENSSTOG00000000684 MTMR11 (ENSSTOG00000006589) OTUD7B (ENSSTOG00000026621) VPS45 (ENSSTOG00000014236) PLEKHO1 (ENSSTOG00000014249) ENSSTOG00000004170 CA14 (ENSSTOG00000027815) APH1A (ENSSTOG00000006041) C1orf54 (ENSSTOG00000006055) ENSSTOG00000024097 Squirrel MODERN SPECIES 271 ENSSTOG00000032774 ENSSTOG00000024781 #21 H2BC3 (ENSSTOG00000034083) H1-2 (ENSSTOG00000025721) HFE (ENSSTOG00000015350) ENSSTOG00000029691 #21 H1-6 (ENSSTOG00000024164) ENSSTOG00000034294 H2AC6 (ENSSTOG00000034455) ENSSTOG00000029814 #28 ENSSTOG00000029863 ENSSTOG00000032348 #28 ENSSTOG00000019576 ENSSTOG00000033868 ENSSTOG00000032658 #21 ENSSTOG00000034791 #22 ENSSTOG00000020189 ENSSTOG00000028273 ENSSTOG00000026857 #21 ENSSTOG00000001676 BTN2A2 (ENSSTOG00000011871) BTN1A1 (ENSSTOG00000004034) ABT1 (ENSSTOG00000024481) ENSSTOG00000030249 ENSSTOG00000033423 ENSSTOG00000029728 ENSSTOG00000023645 ENSSTOG00000033773 ENSSTOG00000030654 ENSSTOG00000028749 ENSSTOG00000026144 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 36 ENSMMMG00000001937 ENSMMMG00000001926 ##22 ENSMMMG00000001920 #21 ENSMMMG00000001916 ENSMMMG00000001889 H1-4 (ENSMMMG00000001870) H2AC6 (ENSMMMG00000001865) ENSMMMG00000001860 H1-6 (ENSMMMG00000001853) ENSMMMG00000001847 #21 HFE (ENSMMMG00000001838) H1-2 (ENSMMMG00000001827) ENSMMMG00000001825 #22 H2BC3 (ENSMMMG00000001823) H2AC4 (ENSMMMG00000001814) ENSMMMG00000001805 #22 ENSMMMG00000001800 #21 ENSMMMG00000001796 ENSMMMG00000001785 H1-1 (ENSMMMG00000001780) TRIM38 (ENSMMMG00000001750) SLC17A2 (ENSMMMG00000001700) SLC17A4 (ENSMMMG00000001650) ENSMMMG00000001635 ENSMMMG00000001626 H2BC1 (ENSMMMG00000001621) ##20 H2AC1 (ENSMMMG00000001616) SCGN (ENSMMMG00000001573) CARMIL1 (ENSMMMG00000001132) ENSMMMG00000000774 RIPOR2 (ENSMMMG00000000738) Alpin marmot MODERN SPECIES 36 SCGN (ENSMMMG00000001573) H2AC1 (ENSMMMG00000001616) H2BC1 (ENSMMMG00000001621) ##20 ENSMMMG00000001626 ENSMMMG00000001635 SLC17A4 (ENSMMMG00000001650) SLC17A2 (ENSMMMG00000001700) TRIM38 (ENSMMMG00000001750) H1-1 (ENSMMMG00000001780) ENSMMMG00000001785 ENSMMMG00000001796 ENSMMMG00000001800 #21 ENSMMMG00000001805 #22 H2AC4 (ENSMMMG00000001814) H2BC3 (ENSMMMG00000001823) ENSMMMG00000001825 #22 H1-2 (ENSMMMG00000001827) HFE (ENSMMMG00000001838) ENSMMMG00000001847 #21 H1-6 (ENSMMMG00000001853) ENSMMMG00000001860 H2AC6 (ENSMMMG00000001865) H1-4 (ENSMMMG00000001870) ENSMMMG00000001889 ENSMMMG00000001916 ENSMMMG00000001920 #21 ENSMMMG00000001926 ##22 ENSMMMG00000001937 ENSMMMG00000001975 ENSMMMG00000001983 ENSMMMG00000001989 Primates ANCESTRAL SPECIES 7 ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b ENSGT01100000263559.A.f.e ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00940000163102 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163388 ENSGT00940000163486 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a ENSGT01100000263486.a.b.a.b.a ENSGT01100000263486.a.b.b ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263559.A.f.e ##22 ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163082 ENSGT00940000162950 ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000160281 ENSGT00940000153125.A Lemuriformes ANCESTRAL SPECIES ENSGT01100000263559.B #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT01100000263559.B #22 Coquerels sifaka MODERN SPECIES 750 APH1A (ENSPCOG00000016266) CA14 (ENSPCOG00000025811) ANP32E (ENSPCOG00000022218) PLEKHO1 (ENSPCOG00000027826) VPS45 (ENSPCOG00000011875) OTUD7B (ENSPCOG00000028177) MTMR11 (ENSPCOG00000027870) SF3B4 (ENSPCOG00000015399) SV2A (ENSPCOG00000018151) H2AC20 (ENSPCOG00000011857) H2BC21 (ENSPCOG00000010375) ENSPCOG00000012693 ##22 ENSPCOG00000011625 ENSPCOG00000005500 ENSPCOG00000011101 #21 H3C13 (ENSPCOG00000011308) #22 FCGR1A (ENSPCOG00000016186) ENSPCOG00000015554 Mouse lemur MODERN SPECIES 11 ENSMICG00000034870 ANP32E (ENSMICG00000015265) PLEKHO1 (ENSMICG00000027313) VPS45 (ENSMICG00000015188) ENSMICG00000035294 OTUD7B (ENSMICG00000047179) MTMR11 (ENSMICG00000000298) SF3B4 (ENSMICG00000044961) SV2A (ENSMICG00000000293) H2BC21 (ENSMICG00000044053) H2AC20 (ENSMICG00000048145) ENSMICG00000044581 #20 ENSMICG00000043363 H2AC18 (ENSMICG00000043969) ENSMICG00000046339 #21 ENSMICG00000045632 #22 FCGR1A (ENSMICG00000033541) ENSMICG00000029326 HJV (ENSMICG00000037948) TXNIP (ENSMICG00000038247) POLR3GL (ENSMICG00000034663) ANKRD34A (ENSMICG00000044107) LIX1L (ENSMICG00000043095) RBM8A (ENSMICG00000031698) PEX11B (ENSMICG00000028232) ITGA10 (ENSMICG00000036050) ANKRD35 (ENSMICG00000028514) PIAS3 (ENSMICG00000033732) NUDT17 (ENSMICG00000031177) POLR3C (ENSMICG00000034253) RNF115 (ENSMICG00000044821) Bushbaby DUPLICATION Bushbaby MODERN SPECIES ENSOGAG00000028032 #22 ENSOGAG00000030176 ENSOGAG00000032631 ENSOGAG00000028067 ENSOGAG00000029978 ENSOGAG00000029164 #22 Bushbaby MODERN SPECIES ENSOGAG00000029164 #22 ENSOGAG00000029978 ENSOGAG00000028067 ENSOGAG00000032631 ENSOGAG00000030176 ENSOGAG00000028032 #22 Haplorrhini ANCESTRAL SPECIES 72 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b Simiiformes ANCESTRAL SPECIES 45 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b Platyrrhini ANCESTRAL SPECIES 12 ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263559.A.f.e ##22 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.t.a.a.a ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537.o ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Cebidae ANCESTRAL SPECIES 12 ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263559.A.f.e ##22 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.t.a.a.a ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537.o ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Cebidae_a ANCESTRAL SPECIES 6 ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f.e ##22 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263575.B.t.a.a.a ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00950000182940.b.a.b ENSGT00870000136537.o ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 ENSGT00500000045038.y.b Bolivian squirrel monkey MODERN SPECIES 194 FCGR1A (ENSSBOG00000035681) H2BC18 (ENSSBOG00000030913) H3-7 (ENSSBOG00000018931) ##22 H2AC19 (ENSSBOG00000019167) ENSSBOG00000014986 #22 ENSSBOG00000015704 #21 ENSSBOG00000008360 H2AC20 (ENSSBOG00000019840) H2AC21 (ENSSBOG00000017659) SV2A (ENSSBOG00000030706) ENSSBOG00000012310 MTMR11 (ENSSBOG00000018459) OTUD7B (ENSSBOG00000022601) VPS45 (ENSSBOG00000029517) PLEKHO1 (ENSSBOG00000031989) ANP32E (ENSSBOG00000033935) CA14 (ENSSBOG00000024949) APH1A (ENSSBOG00000025150) C1orf54 (ENSSBOG00000013160) CIART (ENSSBOG00000024903) Marmoset MODERN SPECIES 9 ENSCJAG00000083457 ENSCJAG00000081006 ENSCJAG00000084541 ENSCJAG00000020687 ENSCJAG00000062347 ENSCJAG00000078453 ENSCJAG00000084089 ENSCJAG00000069867 FCGR1A (ENSCJAG00000000771) ENSCJAG00000074017 H2BC18 (ENSCJAG00000041683) ENSCJAG00000087228 #21 ENSCJAG00000083438 ##22 H2AC18 (ENSCJAG00000073890) ENSCJAG00000078694 ENSCJAG00000078934 #22 ENSCJAG00000086954 #21 H2BC21 (ENSCJAG00000081464) H2AC20 (ENSCJAG00000048427) BOLA1 (ENSCJAG00000044018) SV2A (ENSCJAG00000000779) SF3B4 (ENSCJAG00000042351) MTMR11 (ENSCJAG00000000802) OTUD7B (ENSCJAG00000000821) VPS45 (ENSCJAG00000000845) PLEKHO1 (ENSCJAG00000000867) ANP32E (ENSCJAG00000009710) CA14 (ENSCJAG00000009756) APH1A (ENSCJAG00000009786) C1orf54 (ENSCJAG00000009890) CIART (ENSCJAG00000009905) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 194 ENSANAG00000031357 #22 ENSANAG00000031309 ENSANAG00000021805 ENSANAG00000006272 #22 Mas night monkey MODERN SPECIES 194 ENSANAG00000006272 #22 ENSANAG00000021805 ENSANAG00000031309 ENSANAG00000031357 #22 Catarrhini ANCESTRAL SPECIES 45 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00910000147195 ENSGT00950000183105.B.a.a.a.a ENSGT01100000263506.a.f.b ENSGT01060000248528.b.kh.yb.a.b #21 ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000153125.E.c.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.A ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT01100000263567.a.b #27 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e ##22 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01060000248528.b.kh.yb.b.b.b.b #21 ENSGT01020000230360.c.b.a.b.a.b ##19 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.D.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000162950 ENSGT00940000163388 ENSGT00940000163165 ENSGT00400000024870 ENSGT00940000161576 Rhinopithecus ANCESTRAL SPECIES 721 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000153125.D.a.b Golden snub-nosed monkey MODERN SPECIES 2973 H2AC18 (ENSRROG00000012185) ENSRROG00000009298 #22 H4C15 (ENSRROG00000022198) #21 Cercopithecinae ANCESTRAL SPECIES 81 ENSGT00940000156302 ENSGT01100000263559.B #22 Cercopithecinae_a ANCESTRAL SPECIES 100 ENSGT00940000156302 ENSGT01100000263559.B #22 Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00940000154913.g.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b Olive baboon MODERN SPECIES APH1A (ENSPANG00000008739) CA14 (ENSPANG00000012135) ANP32E (ENSPANG00000032905) PLEKHO1 (ENSPANG00000007434) VPS45 (ENSPANG00000012294) OTUD7B (ENSPANG00000009169) MTMR11 (ENSPANG00000020583) SF3B4 (ENSPANG00000005126) SV2A (ENSPANG00000008740) BOLA1 (ENSPANG00000005165) H2AC21 (ENSPANG00000048915) H2BC21 (ENSPANG00000043204) ENSPANG00000033703 #21 H2AC20 (ENSPANG00000040460) ENSPANG00000049378 H3C13 (ENSPANG00000045449) #22 H2BC18 (ENSPANG00000040080) FCGR1A (ENSPANG00000001763) ENSPANG00000002791 ENSPANG00000036881 ENSPANG00000037189 ENSPANG00000012430 ENSPANG00000037273 ENSPANG00000049208 GJA8 (ENSPANG00000014667) ENSPANG00000040876 GJA5 (ENSPANG00000014222) ACP6 (ENSPANG00000004993) BCL9 (ENSPANG00000021034) CHD1L (ENSPANG00000009170) ENSPANG00000005600 Cercopithecinae_d ANCESTRAL SPECIES 131 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00940000154913.g.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 194 ENSCATG00000006942 #22 ENSCATG00000026319 #19 ENSCATG00000023800 ENSCATG00000017808 #22 H2BC18 (ENSCATG00000029818) FCGR1A (ENSCATG00000036763) ENSCATG00000042090 ENSCATG00000040171 ENSCATG00000045009 ENSCATG00000032168 ENSCATG00000008183 ENSCATG00000000382 ENSCATG00000040939 ENSCATG00000033281 ENSCATG00000042443 GJA8 (ENSCATG00000015119) GJA5 (ENSCATG00000007536) ACP6 (ENSCATG00000014613) BCL9 (ENSCATG00000030994) Sooty mangabey MODERN SPECIES 194 GJA8 (ENSCATG00000015119) ENSCATG00000042443 ENSCATG00000033281 ENSCATG00000040939 ENSCATG00000000382 ENSCATG00000008183 ENSCATG00000032168 ENSCATG00000045009 ENSCATG00000040171 ENSCATG00000042090 FCGR1A (ENSCATG00000036763) H2BC18 (ENSCATG00000029818) ENSCATG00000017808 #22 ENSCATG00000023800 ENSCATG00000026319 #19 ENSCATG00000006942 #22 Macaca ANCESTRAL SPECIES ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263548.a.b.b ENSGT01060000248528.b.kh.yb.a.b #21 ENSGT01100000263506.a.f.b ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01060000248528.b.kh.yb.b.a.mb #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00400000022759 ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b Pig-tailed macaque MODERN SPECIES 556 ENSMNEG00000015126 ##22 H2AC19 (ENSMNEG00000011270) ENSMNEG00000034002 ENSMNEG00000007282 #21 H3C13 (ENSMNEG00000026749) #22 H2BC18 (ENSMNEG00000038342) FCGR1A (ENSMNEG00000033591) ENSMNEG00000042893 ENSMNEG00000042265 ENSMNEG00000034285 ENSMNEG00000039666 ENSMNEG00000043241 ENSMNEG00000040861 ENSMNEG00000040511 ENSMNEG00000038867 ENSMNEG00000039748 ENSMNEG00000029417 ENSMNEG00000044380 GJA8 (ENSMNEG00000029170) ENSMNEG00000034524 Macaca_a ANCESTRAL SPECIES ENSGT00500000045038.y.b.b ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537.m ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00960000186796.b.b.a ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 Rhesus MODERN SPECIES C1H1orf54 (ENSMMUG00000021387) APH1A (ENSMMUG00000021386) CA14 (ENSMMUG00000021385) ANP32E (ENSMMUG00000021531) PLEKHO1 (ENSMMUG00000013681) VPS45 (ENSMMUG00000013673) OTUD7B (ENSMMUG00000007244) ENSMMUG00000052282 MTMR11 (ENSMMUG00000007246) SF3B4 (ENSMMUG00000007256) SV2A (ENSMMUG00000007257) BOLA1 (ENSMMUG00000007258) H2AC21 (ENSMMUG00000061036) H2AC20 (ENSMMUG00000037540) H4C14 (ENSMMUG00000052382) #21 H3C13 (ENSMMUG00000054078) #22 H2BC18 (ENSMMUG00000040506) FCGR1A (ENSMMUG00000004362) ENSMMUG00000062140 ENSMMUG00000048493 ENSMMUG00000057963 ENSMMUG00000056619 GJA8 (ENSMMUG00000001382) GJA5 (ENSMMUG00000001803) ACP6 (ENSMMUG00000013561) BCL9 (ENSMMUG00000016786) FMO5 (ENSMMUG00000000476) CHD1L (ENSMMUG00000009024) PRKAB2 (ENSMMUG00000012221) ENSMMUG00000050315 ENSMMUG00000065207 Hominoidea ANCESTRAL SPECIES 51 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b Hominidae ANCESTRAL SPECIES 48 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000161530 ENSGT00940000163835.a.a ENSGT00940000162723.c.a ENSGT00940000163835.a.b ENSGT00940000163036 ENSGT00940000158017 ENSGT00940000162723.c.b ENSGT01100000263506.a.e.a.a.a.a.a ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.a ENSGT01100000263514.A.e.a.b.a.a.d ENSGT00940000153092.a.a.c.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a.j ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01100000263514.A.e.a.b.b ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a.i.b ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f Gorilla MODERN SPECIES ENSGGOG00000015122 ENSGGOG00000040707 ENSGGOG00000043630 ENSGGOG00000039869 ENSGGOG00000041997 ENSGGOG00000037973 ENSGGOG00000037739 ENSGGOG00000039911 ENSGGOG00000041808 ENSGGOG00000036188 ENSGGOG00000039364 #21 HIST2H3A (ENSGGOG00000041476) ##22 HIST2H2AA3 (ENSGGOG00000043514) ENSGGOG00000040718 HIST2H2AA3 (ENSGGOG00000040128) HIST2H3A (ENSGGOG00000037264) #22 ENSGGOG00000036863 #21 H2BC21 (ENSGGOG00000036989) HIST2H2AC (ENSGGOG00000040152) H2AC21 (ENSGGOG00000040311) BOLA1 (ENSGGOG00000002957) SV2A (ENSGGOG00000002959) SF3B4 (ENSGGOG00000004761) MTMR11 (ENSGGOG00000004764) OTUD7B (ENSGGOG00000024965) VPS45 (ENSGGOG00000026516) PLEKHO1 (ENSGGOG00000002021) ENSGGOG00000011889 CA14 (ENSGGOG00000017116) APH1A (ENSGGOG00000017118) C1orf54 (ENSGGOG00000016964) Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.b ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00940000153125.C ENSGT00990000203553.c.b ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000163525 ENSGT01100000263474.a.b.b.f #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.E.c.b ENSGT00940000153118.db.b ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a.i.b ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01060000248528.b.kh.yb.b.a #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT01100000263575.A Human DUPLICATION Human MODERN SPECIES NOTCH2NLB (ENSG00000286019) NUDT4B (ENSG00000177144) PDE4DIP (ENSG00000178104) NBPF9 (ENSG00000269713) NOTCH2NLC (ENSG00000286219) ENSG00000286185 NBPF19 (ENSG00000271383) PPIAL4C (ENSG00000288867) FCGR1A (ENSG00000150337) H2BC18 (ENSG00000203814) H3C13 (ENSG00000183598) #22 H4C14 (ENSG00000270882) #21 H3C14 (ENSG00000203811) #22 H2AC18 (ENSG00000288825) H2AC19 (ENSG00000288859) H3C15 (ENSG00000203852) #22 H4C15 (ENSG00000270276) #21 H2BC21 (ENSG00000184678) H2AC20 (ENSG00000184260) H2AC21 (ENSG00000184270) BOLA1 (ENSG00000178096) SV2A (ENSG00000159164) SF3B4 (ENSG00000143368) MTMR11 (ENSG00000014914) OTUD7B (ENSG00000264522) VPS45 (ENSG00000136631) PLEKHO1 (ENSG00000023902) ANP32E (ENSG00000143401) CA14 (ENSG00000118298) APH1A (ENSG00000117362) C1orf54 (ENSG00000118292) Human MODERN SPECIES VPS45 (ENSG00000136631) OTUD7B (ENSG00000264522) MTMR11 (ENSG00000014914) SF3B4 (ENSG00000143368) SV2A (ENSG00000159164) BOLA1 (ENSG00000178096) H2AC21 (ENSG00000184270) H2AC20 (ENSG00000184260) H2BC21 (ENSG00000184678) H4C15 (ENSG00000270276) #21 H3C15 (ENSG00000203852) #22 H2AC19 (ENSG00000288859) H2AC18 (ENSG00000288825) H3C14 (ENSG00000203811) #22 H4C14 (ENSG00000270882) #21 H3C13 (ENSG00000183598) #22 H2BC18 (ENSG00000203814) FCGR1A (ENSG00000150337) PPIAL4C (ENSG00000288867) NBPF19 (ENSG00000271383) ENSG00000286185 NOTCH2NLC (ENSG00000286219) NBPF9 (ENSG00000269713) PDE4DIP (ENSG00000178104) NUDT4B (ENSG00000177144) NOTCH2NLB (ENSG00000286019) NBPF14 (ENSG00000270629) PPIAL4G (ENSG00000236334) NBPF11 (ENSG00000263956) GPR89B (ENSG00000188092) GJA8 (ENSG00000121634) Human MODERN SPECIES ANP32E (ENSG00000143401) PLEKHO1 (ENSG00000023902) VPS45 (ENSG00000136631) OTUD7B (ENSG00000264522) MTMR11 (ENSG00000014914) SF3B4 (ENSG00000143368) SV2A (ENSG00000159164) BOLA1 (ENSG00000178096) H2AC21 (ENSG00000184270) H2AC20 (ENSG00000184260) H2BC21 (ENSG00000184678) H4C15 (ENSG00000270276) #21 H3C15 (ENSG00000203852) #22 H2AC19 (ENSG00000288859) H2AC18 (ENSG00000288825) H3C14 (ENSG00000203811) #22 H4C14 (ENSG00000270882) #21 H3C13 (ENSG00000183598) #22 H2BC18 (ENSG00000203814) FCGR1A (ENSG00000150337) PPIAL4C (ENSG00000288867) NBPF19 (ENSG00000271383) ENSG00000286185 NOTCH2NLC (ENSG00000286219) NBPF9 (ENSG00000269713) PDE4DIP (ENSG00000178104) NUDT4B (ENSG00000177144) NOTCH2NLB (ENSG00000286019) NBPF14 (ENSG00000270629) PPIAL4G (ENSG00000236334) NBPF11 (ENSG00000263956) Pan ANCESTRAL SPECIES 55 ENSGT01100000263474.a.b.b.f.b #28 ENSGT01100000263474.a.b.b.f.a #28 ENSGT00940000156302 ENSGT01100000263559.B #22 Chimpanzee MODERN SPECIES 319 H3C13 (ENSPTRG00000044724) ##22 ENSPTRG00000044548 ENSPTRG00000046524 #28 ENSPTRG00000047237 #28 H2AC19 (ENSPTRG00000046303) H3C13 (ENSPTRG00000049585) #22 Bonobo MODERN SPECIES 213 ENSPPAG00000032669 ##22 ENSPPAG00000035234 #28 ENSPPAG00000035334 #28 ENSPPAG00000010106 ENSPPAG00000032850 #22 Orangutan DUPLICATION Orangutan MODERN SPECIES CA14 (ENSPPYG00000000906) ANP32E (ENSPPYG00000000907) PLEKHO1 (ENSPPYG00000034117) VPS45 (ENSPPYG00000000909) OTUD7B (ENSPPYG00000000910) MTMR11 (ENSPPYG00000000911) SF3B4 (ENSPPYG00000000912) SV2A (ENSPPYG00000000913) BOLA1 (ENSPPYG00000040309) H2AC21 (ENSPPYG00000035072) ENSPPYG00000030729 H2BC21 (ENSPPYG00000000917) ENSPPYG00000000922 #21 ENSPPYG00000039474 ENSPPYG00000036744 ENSPPYG00000036244 #22 ENSPPYG00000032863 #22 ENSPPYG00000031542 FCGR1A (ENSPPYG00000019984) ENSPPYG00000039543 ENSPPYG00000038344 ENSPPYG00000032672 ENSPPYG00000040768 ENSPPYG00000039570 ENSPPYG00000000924 ENSPPYG00000033178 ENSPPYG00000034414 ENSPPYG00000000953 ENSPPYG00000041334 ENSPPYG00000000952 PDE4DIP (ENSPPYG00000030940) Orangutan MODERN SPECIES ANP32E (ENSPPYG00000000907) PLEKHO1 (ENSPPYG00000034117) VPS45 (ENSPPYG00000000909) OTUD7B (ENSPPYG00000000910) MTMR11 (ENSPPYG00000000911) SF3B4 (ENSPPYG00000000912) SV2A (ENSPPYG00000000913) BOLA1 (ENSPPYG00000040309) H2AC21 (ENSPPYG00000035072) ENSPPYG00000030729 H2BC21 (ENSPPYG00000000917) ENSPPYG00000000922 #21 ENSPPYG00000039474 ENSPPYG00000036744 ENSPPYG00000036244 #22 ENSPPYG00000032863 #22 ENSPPYG00000031542 FCGR1A (ENSPPYG00000019984) ENSPPYG00000039543 ENSPPYG00000038344 ENSPPYG00000032672 ENSPPYG00000040768 ENSPPYG00000039570 ENSPPYG00000000924 ENSPPYG00000033178 ENSPPYG00000034414 ENSPPYG00000000953 ENSPPYG00000041334 ENSPPYG00000000952 PDE4DIP (ENSPPYG00000030940) ENSPPYG00000040487 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263506.a.e.a.a.b.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.A ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b Eulipotyphla ANCESTRAL SPECIES 377 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a.b.a.a.a.b Hedgehog MODERN SPECIES 16224 H3C13 (ENSEEUG00000006126) #22 H2BC18 (ENSEEUG00000006137) Laurasiatheria_a ANCESTRAL SPECIES ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b Artiodactyla ANCESTRAL SPECIES ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263506.a.e.a.a.b.b ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000153118.db.b ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b Artiodactyla_b ANCESTRAL SPECIES ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a Cetacea ANCESTRAL SPECIES ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f ##22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263506.a.e.a.a.a.a.a ENSGT00940000156302.m.a ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Odontoceti ANCESTRAL SPECIES ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01100000263506.a.e.b ENSGT01100000263575.B.t.a.a.b ENSGT01100000263559.A.f ##22 ENSGT00940000156302.m.b ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Odontoceti_a ANCESTRAL SPECIES ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f ##22 ENSGT00940000156302.m.b ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a.b ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Dolphin MODERN SPECIES 2133 H2BC18 (ENSTTRG00000005097) H3-7 (ENSTTRG00000005108) ##22 ENSTTRG00000005120 #21 ENSTTRG00000005132 ENSTTRG00000005136 H3C14 (ENSTTRG00000005140) #22 H2BC21 (ENSTTRG00000005143) H2AC20 (ENSTTRG00000005146) H2AC21 (ENSTTRG00000005162) BOLA1 (ENSTTRG00000005176) SV2A (ENSTTRG00000005189) SF3B4 (ENSTTRG00000005217) MTMR11 (ENSTTRG00000005231) OTUD7B (ENSTTRG00000005256) Odontoceti_b ANCESTRAL SPECIES ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ##22 ENSGT00940000156302.m.b ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a.b ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Vaquita MODERN SPECIES PLEKHO1 (ENSPSNG00000001496) VPS45 (ENSPSNG00000001453) OTUD7B (ENSPSNG00000001389) MTMR11 (ENSPSNG00000001321) SF3B4 (ENSPSNG00000001286) SV2A (ENSPSNG00000001263) BOLA1 (ENSPSNG00000001237) H2AC21 (ENSPSNG00000001218) H2AC20 (ENSPSNG00000001208) H2BC21 (ENSPSNG00000001199) ENSPSNG00000001182 ##22 ENSPSNG00000001168 ENSPSNG00000001160 ENSPSNG00000001148 ENSPSNG00000001132 ENSPSNG00000001122 #22 H3-7 (ENSPSNG00000001054) ##22 H2BC18 (ENSPSNG00000001038) ENSPSNG00000001015 ENSPSNG00000000971 HJV (ENSPSNG00000000911) TXNIP (ENSPSNG00000000878) POLR3GL (ENSPSNG00000000850) ANKRD34A (ENSPSNG00000000834) LIX1L (ENSPSNG00000000812) ENSPSNG00000000786 PEX11B (ENSPSNG00000000744) ITGA10 (ENSPSNG00000000636) ANKRD35 (ENSPSNG00000000537) PIAS3 (ENSPSNG00000000478) NUDT17 (ENSPSNG00000000422) Monodontidae ANCESTRAL SPECIES ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028.w.a ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.a.b ENSGT01100000263559.A.f ##22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263506.a.e.a.a.a.a.a ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Narwhal MODERN SPECIES 304 CA14 (ENSMMNG00015000189) ANP32E (ENSMMNG00015000229) PLEKHO1 (ENSMMNG00015000265) ENSMMNG00015000303 OTUD7B (ENSMMNG00015000357) MTMR11 (ENSMMNG00015000420) SF3B4 (ENSMMNG00015000508) SV2A (ENSMMNG00015000538) BOLA1 (ENSMMNG00015000565) H2AC21 (ENSMMNG00015000574) H2AC20 (ENSMMNG00015000583) ENSMMNG00015000589 ENSMMNG00015000597 ##22 ENSMMNG00015000609 ##22 ENSMMNG00015000624 #21 H3C13 (ENSMMNG00015000641) #22 H2BC18 (ENSMMNG00015000651) ENSMMNG00015000669 ENSMMNG00015000699 HJV (ENSMMNG00015000764) TXNIP (ENSMMNG00015000791) ENSMMNG00015000840 ANKRD34A (ENSMMNG00015000874) LIX1L (ENSMMNG00015000890) RBM8A (ENSMMNG00015000918) PEX11B (ENSMMNG00015000972) ITGA10 (ENSMMNG00015001059) ANKRD35 (ENSMMNG00015001213) PIAS3 (ENSMMNG00015001315) NUDT17 (ENSMMNG00015001410) POLR3C (ENSMMNG00015001448) Sperm whale DUPLICATION Sperm whale MODERN SPECIES 15 PLEKHO1 (ENSPCTG00005010430) VPS45 (ENSPCTG00005010502) OTUD7B (ENSPCTG00005010704) MTMR11 (ENSPCTG00005010793) SF3B4 (ENSPCTG00005011142) SV2A (ENSPCTG00005011188) BOLA1 (ENSPCTG00005011392) H2AC21 (ENSPCTG00005011410) H2AC20 (ENSPCTG00005011425) ENSPCTG00005011442 ENSPCTG00005011455 ##22 ENSPCTG00005011469 ENSPCTG00005011490 ENSPCTG00005011505 ENSPCTG00005011520 ENSPCTG00005011537 #22 ENSPCTG00005011561 ENSPCTG00005011661 HJV (ENSPCTG00005011809) TXNIP (ENSPCTG00005011915) POLR3GL (ENSPCTG00005012074) ENSPCTG00005012215 ENSPCTG00005012232 LIX1L (ENSPCTG00005012257) RBM8A (ENSPCTG00005012300) PEX11B (ENSPCTG00005012430) ITGA10 (ENSPCTG00005012521) POLR3C (ENSPCTG00005012859) ENSPCTG00005012939 ENSPCTG00005012998 PDZK1 (ENSPCTG00005013079) Sperm whale MODERN SPECIES 545 ENSPCTG00005014494 #21 ENSPCTG00005014511 #22 H2BC18 (ENSPCTG00005014536) Blue whale DUPLICATION Blue whale MODERN SPECIES PLEKHO1 (ENSBMSG00010013986) VPS45 (ENSBMSG00010013898) OTUD7B (ENSBMSG00010004006) MTMR11 (ENSBMSG00010003964) SF3B4 (ENSBMSG00010003943) SV2A (ENSBMSG00010003927) BOLA1 (ENSBMSG00010003920) H2AC21 (ENSBMSG00010003913) H2AC20 (ENSBMSG00010003906) H2BC21 (ENSBMSG00010003899) ENSBMSG00010003894 #22 ENSBMSG00010003888 ENSBMSG00010003885 ENSBMSG00010003880 ENSBMSG00010003874 ENSBMSG00010003866 #22 ENSBMSG00010003857 #21 ENSBMSG00010003847 #22 H2BC18 (ENSBMSG00010003841) ENSBMSG00010003827 HJV (ENSBMSG00010003805) TXNIP (ENSBMSG00010003790) POLR3GL (ENSBMSG00010003781) ANKRD34A (ENSBMSG00010003767) LIX1L (ENSBMSG00010003757) RBM8A (ENSBMSG00010003752) PEX11B (ENSBMSG00010003741) ITGA10 (ENSBMSG00010003688) NUDT17 (ENSBMSG00010003650) ENSBMSG00010003614 POLR3C (ENSBMSG00010003595) Blue whale MODERN SPECIES OTUD7B (ENSBMSG00010004006) MTMR11 (ENSBMSG00010003964) SF3B4 (ENSBMSG00010003943) SV2A (ENSBMSG00010003927) BOLA1 (ENSBMSG00010003920) H2AC21 (ENSBMSG00010003913) H2AC20 (ENSBMSG00010003906) H2BC21 (ENSBMSG00010003899) ENSBMSG00010003894 #22 ENSBMSG00010003888 ENSBMSG00010003885 ENSBMSG00010003880 ENSBMSG00010003874 ENSBMSG00010003866 #22 ENSBMSG00010003857 #21 ENSBMSG00010003847 #22 H2BC18 (ENSBMSG00010003841) ENSBMSG00010003827 HJV (ENSBMSG00010003805) TXNIP (ENSBMSG00010003790) POLR3GL (ENSBMSG00010003781) ANKRD34A (ENSBMSG00010003767) LIX1L (ENSBMSG00010003757) RBM8A (ENSBMSG00010003752) PEX11B (ENSBMSG00010003741) ITGA10 (ENSBMSG00010003688) NUDT17 (ENSBMSG00010003650) ENSBMSG00010003614 POLR3C (ENSBMSG00010003595) ENSBMSG00010003585 ENSBMSG00010003575 Blue whale MODERN SPECIES RBM8A (ENSBMSG00010003752) LIX1L (ENSBMSG00010003757) ANKRD34A (ENSBMSG00010003767) POLR3GL (ENSBMSG00010003781) TXNIP (ENSBMSG00010003790) HJV (ENSBMSG00010003805) ENSBMSG00010003827 H2BC18 (ENSBMSG00010003841) ENSBMSG00010003847 #22 ENSBMSG00010003857 #21 ENSBMSG00010003866 #22 ENSBMSG00010003874 ENSBMSG00010003880 ENSBMSG00010003885 ENSBMSG00010003888 ENSBMSG00010003894 #22 H2BC21 (ENSBMSG00010003899) H2AC20 (ENSBMSG00010003906) H2AC21 (ENSBMSG00010003913) BOLA1 (ENSBMSG00010003920) SV2A (ENSBMSG00010003927) SF3B4 (ENSBMSG00010003943) MTMR11 (ENSBMSG00010003964) OTUD7B (ENSBMSG00010004006) VPS45 (ENSBMSG00010013898) PLEKHO1 (ENSBMSG00010013986) ANP32E (ENSBMSG00010014047) CA14 (ENSBMSG00010014191) ENSBMSG00010014245 C1orf54 (ENSBMSG00010014318) CIART (ENSBMSG00010014384) Pecora ANCESTRAL SPECIES 32 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01100000263514.A.e.a.b.b ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153118.db.b.a ENSGT01100000263474.a.b.b.e.a.a.a.b.g.a #28 ENSGT00940000153125.E.c.a.b.b ENSGT00940000162950 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.E.c.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT01060000248528.b.jh.a.b #21 ENSGT00940000163036 ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT01090000259995.b.a.a.a.a.b.e ENSGT01090000259995.b.a.a.a.a.b.f Yarkand deer MODERN SPECIES 578 ENSCHYG00000014275 H2AC19 (ENSCHYG00000014327) ENSCHYG00000014354 #22 Percora_a ANCESTRAL SPECIES 12 ENSGT01100000263474.a.b.b.e.a.a.a.b.h #28 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.vc.b ENSGT01100000263548.a.b.b ENSGT01100000263486.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.vc.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.wc ENSGT00940000153118.db.b.a ENSGT01100000263474.a.b.b.e.a.a.a.b.g.a #28 ENSGT00940000153125.E.c.a.b.b ENSGT00940000162950 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.E.c.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT01060000248528.b.jh.a.b #21 ENSGT00940000163036 ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT01090000259995.b.a.a.a.a.b.e ENSGT01090000259995.b.a.a.a.a.b.f ENSGT00940000162956.c Bovidae ANCESTRAL SPECIES 1 ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b #21 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263474.a.b.a.d #20 ENSGT00940000156302 ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537.i ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 Caprinae ANCESTRAL SPECIES 2 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537.i ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Rambouillet Sheep MODERN SPECIES POLR3GL (ENSOARG00020003936) TXNIP (ENSOARG00020003962) HJV (ENSOARG00020004031) ENSOARG00020006466 ENSOARG00020006487 ENSOARG00020006514 FCGR1A (ENSOARG00020006588) H2BC18 (ENSOARG00020006656) H3-7 (ENSOARG00020006703) ##22 ENSOARG00020006725 #21 ENSOARG00020006745 ##22 ENSOARG00020006772 ENSOARG00020006796 ENSOARG00020006810 #20 ENSOARG00020006832 ENSOARG00020006850 #22 HIST2H2BE (ENSOARG00020006877) HIST2H2AC (ENSOARG00020006891) HIST2H2AB (ENSOARG00020006921) BOLA1 (ENSOARG00020006951) SV2A (ENSOARG00020007009) SF3B4 (ENSOARG00020007183) MTMR11 (ENSOARG00020007236) OTUD7B (ENSOARG00020007348) VPS45 (ENSOARG00020007445) PLEKHO1 (ENSOARG00020007594) ENSOARG00020007614 CA14 (ENSOARG00020007644) APH1A (ENSOARG00020007706) C1orf54 (ENSOARG00020007824) CIART (ENSOARG00020007852) Goat MODERN SPECIES 22 ANKRD34A (ENSCHIG00000007942) POLR3GL (ENSCHIG00000008824) TXNIP (ENSCHIG00000017689) HJV (ENSCHIG00000010408) ENSCHIG00000023415 ENSCHIG00000017683 FCGR1A (ENSCHIG00000027141) H2BC18 (ENSCHIG00000007673) ENSCHIG00000010234 ##22 ENSCHIG00000009699 #21 ENSCHIG00000013241 ##22 ENSCHIG00000008044 ENSCHIG00000013722 ENSCHIG00000007823 ENSCHIG00000022263 ENSCHIG00000010054 #22 H2BC21 (ENSCHIG00000012955) H2AC20 (ENSCHIG00000010392) H2AC21 (ENSCHIG00000006209) BOLA1 (ENSCHIG00000023087) SV2A (ENSCHIG00000017231) ENSCHIG00000025663 MTMR11 (ENSCHIG00000021928) OTUD7B (ENSCHIG00000020643) VPS45 (ENSCHIG00000010595) PLEKHO1 (ENSCHIG00000022413) ANP32E (ENSCHIG00000002759) CA14 (ENSCHIG00000024032) APH1A (ENSCHIG00000015526) CIART (ENSCHIG00000001297) MRPS21 (ENSCHIG00000021516) Bovinae ANCESTRAL SPECIES 9 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f.n.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000163525 ENSGT01060000248528.b.kh.yb #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01060000248528.b.kh.xb.a.a #21 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a ##20 ENSGT01100000263474.a.a.c.b ##20 ENSGT01020000230360.c.b.a.b.b.d #19 ENSGT00950000183108.a ENSGT00940000155112.B American bison MODERN SPECIES 3032 MTMR11 (ENSBBBG00000023347) ENSBBBG00000006102 SV2A (ENSBBBG00000023321) ENSBBBG00000023289 ENSBBBG00000023283 H2AC21 (ENSBBBG00000023276) H2AC20 (ENSBBBG00000023272) H2BC21 (ENSBBBG00000008849) ENSBBBG00000008681 ##22 ENSBBBG00000023258 ENSBBBG00000023255 ENSBBBG00000006078 ENSBBBG00000023206 ENSBBBG00000023201 ##22 H4C15 (ENSBBBG00000023197) #21 H3C13 (ENSBBBG00000023194) #22 H2BC18 (ENSBBBG00000023192) FCGR1A (ENSBBBG00000023183) ENSBBBG00000000326 ENSBBBG00000000337 Bos ANCESTRAL SPECIES 68 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Bos_a ANCESTRAL SPECIES ENSGT01100000263559.B #22 Domestic yak MODERN SPECIES 22 ENSBGRG00000014985 LIX1L (ENSBGRG00000015160) ANKRD34A (ENSBGRG00000015222) POLR3GL (ENSBGRG00000015249) TXNIP (ENSBGRG00000015334) HJV (ENSBGRG00000015528) ENSBGRG00000015702 ENSBGRG00000015767 FCGR1A (ENSBGRG00000015945) H2BC18 (ENSBGRG00000016034) ENSBGRG00000016114 ##22 ENSBGRG00000016136 ##22 ENSBGRG00000016148 ENSBGRG00000016162 ENSBGRG00000016186 ENSBGRG00000016242 #22 ENSBGRG00000016266 ##22 H2BC21 (ENSBGRG00000016302) H2AC20 (ENSBGRG00000016331) H2AC21 (ENSBGRG00000016349) ENSBGRG00000016367 SV2A (ENSBGRG00000016418) ENSBGRG00000016698 MTMR11 (ENSBGRG00000016764) OTUD7B (ENSBGRG00000016856) VPS45 (ENSBGRG00000016926) PLEKHO1 (ENSBGRG00000017135) ENSBGRG00000017198 ENSBGRG00000017224 CA14 (ENSBGRG00000000220) APH1A (ENSBGRG00000000249) Bos_b ANCESTRAL SPECIES 63 ENSGT01100000263559.B #22 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Cow DUPLICATION Cow MODERN SPECIES 51 ENSBTAG00000054658 ENSBTAG00000050465 ENSBTAG00000051309 ##21 ENSBTAG00000050095 #22 ENSBTAG00000053942 ENSBTAG00000053309 ENSBTAG00000053718 ##21 ENSBTAG00000051272 ##22 ENSBTAG00000050054 ENSBTAG00000051460 ENSBTAG00000050880 ##21 ENSBTAG00000054782 #22 ENSBTAG00000052212 ENSBTAG00000051398 ENSBTAG00000049559 ENSBTAG00000052507 ##21 ENSBTAG00000052656 ENSBTAG00000048564 ENSBTAG00000053021 ##21 ENSBTAG00000054906 #22 ENSBTAG00000051109 Cow MODERN SPECIES 51 ENSBTAG00000054658 ENSBTAG00000050465 ENSBTAG00000051309 ##21 ENSBTAG00000050095 #22 ENSBTAG00000053942 ENSBTAG00000053309 ENSBTAG00000053718 ##21 ENSBTAG00000051272 ##22 ENSBTAG00000050054 ENSBTAG00000051460 ENSBTAG00000050880 ##21 ENSBTAG00000054782 #22 ENSBTAG00000052212 ENSBTAG00000051398 ENSBTAG00000049559 ENSBTAG00000052507 ##21 ENSBTAG00000052656 ENSBTAG00000048564 ENSBTAG00000053021 ##21 Cow MODERN SPECIES 51 ENSBTAG00000053942 ENSBTAG00000053309 ENSBTAG00000053718 ##21 ENSBTAG00000051272 ##22 ENSBTAG00000050054 ENSBTAG00000051460 ENSBTAG00000050880 ##21 ENSBTAG00000054782 #22 ENSBTAG00000052212 ENSBTAG00000051398 ENSBTAG00000049559 ENSBTAG00000052507 ##21 ENSBTAG00000052656 ENSBTAG00000048564 ENSBTAG00000053021 ##21 ENSBTAG00000054906 #22 ENSBTAG00000051109 Camelidae ANCESTRAL SPECIES 6 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.a.a.b ENSGT01100000263559.B #22 ENSGT01100000263559.A.f ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Arabian camel DUPLICATION Arabian camel MODERN SPECIES 13 ENSCDRG00005016574 APH1A (ENSCDRG00005016465) CA14 (ENSCDRG00005016386) ANP32E (ENSCDRG00005016234) PLEKHO1 (ENSCDRG00005016174) VPS45 (ENSCDRG00005016029) OTUD7B (ENSCDRG00005015982) MTMR11 (ENSCDRG00005015753) SF3B4 (ENSCDRG00005015698) SV2A (ENSCDRG00005015609) BOLA1 (ENSCDRG00005015588) H2AC21 (ENSCDRG00005015577) H2AC20 (ENSCDRG00005015569) ENSCDRG00005015337 ENSCDRG00005015322 ENSCDRG00005015313 #22 ENSCDRG00005015303 #21 ENSCDRG00005015297 #22 H2BC18 (ENSCDRG00005015267) FCGR1A (ENSCDRG00005015157) ENSCDRG00005015110 ENSCDRG00005015029 HJV (ENSCDRG00005014941) TXNIP (ENSCDRG00005014863) POLR3GL (ENSCDRG00005014814) ANKRD34A (ENSCDRG00005014782) LIX1L (ENSCDRG00005014710) RBM8A (ENSCDRG00005014616) ENSCDRG00005014575 ITGA10 (ENSCDRG00005014118) ANKRD35 (ENSCDRG00005013927) Arabian camel MODERN SPECIES 13 CA14 (ENSCDRG00005016386) ANP32E (ENSCDRG00005016234) PLEKHO1 (ENSCDRG00005016174) VPS45 (ENSCDRG00005016029) OTUD7B (ENSCDRG00005015982) MTMR11 (ENSCDRG00005015753) SF3B4 (ENSCDRG00005015698) SV2A (ENSCDRG00005015609) BOLA1 (ENSCDRG00005015588) H2AC21 (ENSCDRG00005015577) H2AC20 (ENSCDRG00005015569) ENSCDRG00005015337 ENSCDRG00005015322 ENSCDRG00005015313 #22 ENSCDRG00005015303 #21 ENSCDRG00005015297 #22 H2BC18 (ENSCDRG00005015267) FCGR1A (ENSCDRG00005015157) ENSCDRG00005015110 ENSCDRG00005015029 HJV (ENSCDRG00005014941) TXNIP (ENSCDRG00005014863) POLR3GL (ENSCDRG00005014814) ANKRD34A (ENSCDRG00005014782) LIX1L (ENSCDRG00005014710) RBM8A (ENSCDRG00005014616) ENSCDRG00005014575 ITGA10 (ENSCDRG00005014118) ANKRD35 (ENSCDRG00005013927) PIAS3 (ENSCDRG00005013833) ENSCDRG00005013752 Suina ANCESTRAL SPECIES 8 ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01100000263474.a.b.b.e.a.a.a.a #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.f.b ENSGT00940000153092.a.a.d ENSGT00940000163525 ENSGT01100000263474.a.b.a.d #20 ENSGT01060000248528.b.kh.yb #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.A.f ##22 ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000153118.db.b ENSGT01100000263559.B #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Pig MODERN SPECIES 12 RBM8A (ENSSSCG00000028509) LIX1L (ENSSSCG00000026502) ANKRD34A (ENSSSCG00000037823) ENSSSCG00000006682 TXNIP (ENSSSCG00000031262) HJV (ENSSSCG00000035429) ENSSSCG00000006679 FCGR1A (ENSSSCG00000006678) H2BC18 (ENSSSCG00000062160) ENSSSCG00000059426 #21 H3C14 (ENSSSCG00000063270) ##22 ENSSSCG00000057512 ENSSSCG00000055629 H2BC21 (ENSSSCG00000060759) ENSSSCG00000057447 ENSSSCG00000053902 #22 ENSSSCG00000047083 H2AC20 (ENSSSCG00000034598) H2AC21 (ENSSSCG00000063420) BOLA1 (ENSSSCG00000006667) SV2A (ENSSSCG00000006666) SF3B4 (ENSSSCG00000006665) MTMR11 (ENSSSCG00000006664) OTUD7B (ENSSSCG00000006663) VPS45 (ENSSSCG00000006661) PLEKHO1 (ENSSSCG00000022784) ANP32E (ENSSSCG00000035209) CA14 (ENSSSCG00000027875) APH1A (ENSSSCG00000028297) C1orf54 (ENSSSCG00000045950) CIART (ENSSSCG00000038374) Chacoan peccary MODERN SPECIES 29 PEX11B (ENSCWAG00000011193) ENSCWAG00000011122 RBM8A (ENSCWAG00000011078) LIX1L (ENSCWAG00000011045) ANKRD34A (ENSCWAG00000011022) ENSCWAG00000010984 TXNIP (ENSCWAG00000010902) HJV (ENSCWAG00000010824) ENSCWAG00000010758 ENSCWAG00000010702 ENSCWAG00000010635 H2BC18 (ENSCWAG00000010598) ENSCWAG00000010582 #21 ENSCWAG00000010575 #20 ENSCWAG00000010555 H3C15 (ENSCWAG00000010535) #22 H2BC21 (ENSCWAG00000010520) H2AC20 (ENSCWAG00000010494) H2AC21 (ENSCWAG00000010470) BOLA1 (ENSCWAG00000010457) SV2A (ENSCWAG00000010325) SF3B4 (ENSCWAG00000010291) MTMR11 (ENSCWAG00000009987) OTUD7B (ENSCWAG00000009903) ENSCWAG00000009861 VPS45 (ENSCWAG00000009712) PLEKHO1 (ENSCWAG00000009593) ANP32E (ENSCWAG00000009540) CA14 (ENSCWAG00000009438) APH1A (ENSCWAG00000009346) C1orf54 (ENSCWAG00000009306) Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00390000002062 ENSGT00950000182802.B.a.a.b ENSGT00940000161530 ENSGT01060000248528.b.kh.xb.a.b #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh.yb.d #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b #28 ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a ##20 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f ##22 ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263575.A ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 Chiroptera ANCESTRAL SPECIES 20 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.d #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u ENSGT00940000153125.E.c.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153125.E.c.a.b.b ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263514.A.e.a.b.a.b.a.b Megabat MODERN SPECIES 4971 ENSPVAG00000024247 ENSPVAG00000012140 #22 ENSPVAG00000024083 #21 Equus ANCESTRAL SPECIES 3 ENSGT01100000263506.a.e.b ENSGT01100000263559.A.f ##22 ENSGT00940000153092.a.b.e.a.a ENSGT01100000263575.B.u ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000163036.g.a.a.a ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ENSGT00940000160426 ENSGT01100000263567.a.a ##27 ENSGT01060000248528.b.jh.b #21 ENSGT01060000248528.b.kh.yb.d #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.a ENSGT01100000263559.B #22 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 ENSGT00950000182940.b.a.b ENSGT00870000136537 ENSGT00940000160276 ENSGT00940000159172 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000156893 ENSGT00390000002049.c.a ENSGT00390000003103 ENSGT00390000018360 ENSGT00500000045038 Donkey DUPLICATION Donkey MODERN SPECIES 17 ANP32E (ENSEASG00005038731) PLEKHO1 (ENSEASG00005001526) VPS45 (ENSEASG00005001512) ENSEASG00005027301 OTUD7B (ENSEASG00005001503) MTMR11 (ENSEASG00005001485) SF3B4 (ENSEASG00005001477) SV2A (ENSEASG00005001472) ENSEASG00005001466 H2AC21 (ENSEASG00005032093) ENSEASG00005025005 ENSEASG00005026834 #22 ENSEASG00005033525 ENSEASG00005027933 ENSEASG00005036493 #21 ENSEASG00005037866 #22 ENSEASG00005002125 ENSEASG00005002130 ENSEASG00005037767 ENSEASG00005025106 TXNIP (ENSEASG00005007477) POLR3GL (ENSEASG00005007466) ANKRD34A (ENSEASG00005007463) LIX1L (ENSEASG00005007459) RBM8A (ENSEASG00005007455) ENSEASG00005007451 PEX11B (ENSEASG00005032013) ITGA10 (ENSEASG00005007436) ANKRD35 (ENSEASG00005007430) PIAS3 (ENSEASG00005007424) NUDT17 (ENSEASG00005007420) Donkey MODERN SPECIES 17 PEX11B (ENSEASG00005032013) ENSEASG00005007451 RBM8A (ENSEASG00005007455) LIX1L (ENSEASG00005007459) ANKRD34A (ENSEASG00005007463) POLR3GL (ENSEASG00005007466) TXNIP (ENSEASG00005007477) ENSEASG00005025106 ENSEASG00005037767 ENSEASG00005002130 ENSEASG00005002125 ENSEASG00005037866 #22 ENSEASG00005036493 #21 ENSEASG00005027933 ENSEASG00005033525 ENSEASG00005026834 #22 ENSEASG00005025005 H2AC21 (ENSEASG00005032093) ENSEASG00005001466 SV2A (ENSEASG00005001472) SF3B4 (ENSEASG00005001477) MTMR11 (ENSEASG00005001485) OTUD7B (ENSEASG00005001503) ENSEASG00005027301 VPS45 (ENSEASG00005001512) PLEKHO1 (ENSEASG00005001526) ANP32E (ENSEASG00005038731) CA14 (ENSEASG00005001536) APH1A (ENSEASG00005035187) C1orf54 (ENSEASG00005025776) CIART (ENSEASG00005001554) Carnivora ANCESTRAL SPECIES 75 ENSGT01060000248528.b.kh.xb.b.b #21 ENSGT01100000263559.B #22 Caniformia ANCESTRAL SPECIES 31 ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263559.A.f ##22 ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Caniformia_b ANCESTRAL SPECIES 35 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f ##22 ENSGT00940000156302 ENSGT01100000263506.a.e.a.a.a.a.b.a ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Mustelinae ANCESTRAL SPECIES 81 ENSGT00500000045038 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f American mink MODERN SPECIES 530 OTUD7B (ENSNVIG00000003037) MTMR11 (ENSNVIG00000003067) SF3B4 (ENSNVIG00000003168) SV2A (ENSNVIG00000003188) BOLA1 (ENSNVIG00000003246) H2AC21 (ENSNVIG00000003251) H2AC20 (ENSNVIG00000003252) ENSNVIG00000003258 ENSNVIG00000003275 ##22 ENSNVIG00000003279 ENSNVIG00000003286 ENSNVIG00000003349 ENSNVIG00000003397 ENSNVIG00000003399 ##22 H4 (ENSNVIG00000003408) #21 ENSNVIG00000003413 #22 H2BC18 (ENSNVIG00000003417) ENSNVIG00000003430 ENSNVIG00000003436 ENSNVIG00000003455 ENSNVIG00000003483 Ursidae ANCESTRAL SPECIES ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00950000182907.a.a.a.b ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263575.A ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185.p ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Ursus ANCESTRAL SPECIES 290 ENSGT01060000248528.b.jh.a.b #21 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f American black bear MODERN SPECIES 234 PLEKHO1 (ENSUAMG00000022464) VPS45 (ENSUAMG00000022465) OTUD7B (ENSUAMG00000022466) MTMR11 (ENSUAMG00000022467) SF3B4 (ENSUAMG00000022468) SV2A (ENSUAMG00000022469) BOLA1 (ENSUAMG00000022470) ENSUAMG00000022471 H2AC21 (ENSUAMG00000022472) ENSUAMG00000022473 ENSUAMG00000022483 ENSUAMG00000022505 ENSUAMG00000022508 ENSUAMG00000022509 ENSUAMG00000022510 #21 H3C13 (ENSUAMG00000022511) #22 H2BC18 (ENSUAMG00000022512) FCGR1A (ENSUAMG00000022513) ENSUAMG00000022514 ENSUAMG00000022516 Giant Panda MODERN SPECIES 11 C1orf54 (ENSAMEG00000001725) APH1A (ENSAMEG00000001729) CA14 (ENSAMEG00000001775) ANP32E (ENSAMEG00000001813) PLEKHO1 (ENSAMEG00000001832) VPS45 (ENSAMEG00000001841) OTUD7B (ENSAMEG00000010043) MTMR11 (ENSAMEG00000010059) SF3B4 (ENSAMEG00000010073) SV2A (ENSAMEG00000010085) BOLA1 (ENSAMEG00000018625) H2AC21 (ENSAMEG00000030369) H2AC20 (ENSAMEG00000030590) H2BC21 (ENSAMEG00000024998) ENSAMEG00000026973 #21 H3C14 (ENSAMEG00000026075) #22 ENSAMEG00000031520 ENSAMEG00000007093 ENSAMEG00000029936 ENSAMEG00000006949 ENSAMEG00000026609 TXNIP (ENSAMEG00000017638) ENSAMEG00000017634 ANKRD34A (ENSAMEG00000017633) LIX1L (ENSAMEG00000017628) RBM8A (ENSAMEG00000017623) ENSAMEG00000025842 PEX11B (ENSAMEG00000031122) PEX11B (ENSAMEG00000026333) ITGA10 (ENSAMEG00000017585) ANKRD35 (ENSAMEG00000027203) Felidae ANCESTRAL SPECIES 10 ENSGT00940000156302 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00940000153118.db.a.b ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT01060000248528.b.kh.yb.d #21 ENSGT00940000155501.a.b.e.b ENSGT01100000263567.a.b #27 ENSGT01060000248528.b.kh.xb.b.b #21 ENSGT01100000263559.B #22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a Panthera ANCESTRAL SPECIES 30 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263567.a.b #27 ENSGT00940000155501.a.b.e.b ENSGT01060000248528.b.kh.yb.d #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ENSGT01100000263474.a.b.b.e.a.a.b #28 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263504.a.b.b.b.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ENSGT00990000203553.c.b ENSGT00940000163835 ENSGT00940000164101.a ENSGT00940000161530 ENSGT00950000182802.B.a.a.b.d ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.b.a Panthera_a ANCESTRAL SPECIES 79 ENSGT01100000263504.a.b.b.b.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263559.A.f ##22 ENSGT01100000263506.a.e.b ENSGT01050000244808.A.b.b.a ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f leopard MODERN SPECIES 149 OTUD7B (ENSPPRG00000005622) MTMR11 (ENSPPRG00000007153) SF3B4 (ENSPPRG00000007384) SV2A (ENSPPRG00000007971) BOLA1 (ENSPPRG00000016802) H2AC21 (ENSPPRG00000016850) ENSPPRG00000016865 ENSPPRG00000016879 H2AC20 (ENSPPRG00000016889) H2BC21 (ENSPPRG00000016907) H2AC19 (ENSPPRG00000016923) ENSPPRG00000017082 ENSPPRG00000017282 ENSPPRG00000017308 ENSPPRG00000017324 #21 H3C13 (ENSPPRG00000017364) #22 H2BC18 (ENSPPRG00000011510) FCGR1A (ENSPPRG00000012934) ENSPPRG00000013069 ENSPPRG00000013639 lion MODERN SPECIES 404 ENSPLOG00000020331 H2AC19 (ENSPLOG00000020345) ENSPLOG00000020358 #22 Marsupialia ANCESTRAL SPECIES 22 ENSGT00530000063599.A ENSGT00940000162162.b.a.b ENSGT00940000163105 ENSGT00940000158772 ENSGT00940000157016 ENSGT00390000007779 ENSGT00940000153882.a.b.b.b ENSGT00530000063753.B ENSGT00940000161686 ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000161385 ENSGT01100000263575.A ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263559.A.f ##22 ENSGT00940000153092.a.a.b Marsupialia_b ANCESTRAL SPECIES 59 ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000163082 Diprotodontia ANCESTRAL SPECIES 119 ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f ##22 ENSGT01100000263575.B ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000163082 Wallaby DUPLICATION Wallaby MODERN SPECIES 13852 ENSMEUG00000000895 ENSMEUG00000000893 #22 ENSMEUG00000000889 ENSMEUG00000000886 ENSMEUG00000000879 ENSMEUG00000000873 Wallaby MODERN SPECIES 12404 ENSMEUG00000005952 #22 ENSMEUG00000005947 ##22 Diprotodontia_a ANCESTRAL SPECIES 37 ENSGT00940000162162.b.a.b ENSGT00940000163105 ENSGT00940000158772 ENSGT00940000157016 ENSGT00390000007779 ENSGT00940000153882.a.b.b.b ENSGT00530000063753.B ENSGT00940000161686 ENSGT00940000153104.e.b.a.a.a.a ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000153118.db.b ENSGT01100000263504.a.b.b.b.a.a ENSGT00940000155501.b.f.a ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT00940000161385 ENSGT01100000263575.A ENSGT00940000155501.b.e.b ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000160426.b ENSGT01100000263567.a.a ##27 ENSGT01100000263474.a.b.b #28 ENSGT01100000263504.a.b.b.b.b ENSGT00940000155501.b.f.b ENSGT00940000160426.a.a.b ENSGT01100000263575.B.e.a ENSGT00940000155501.b.e.a koala DUPLICATION koala MODERN SPECIES 167 ENSPCIG00000015334 TRIM11 (ENSPCIG00000015276) ENSPCIG00000037166 ENSPCIG00000015238 ##27 ENSPCIG00000031167 #28 ENSPCIG00000033149 ENSPCIG00000031273 ENSPCIG00000032592 ENSPCIG00000031487 ENSPCIG00000031433 ENSPCIG00000036717 ENSPCIG00000034762 ENSPCIG00000014676 ENSPCIG00000031126 ENSPCIG00000031257 #22 ENSPCIG00000034498 #22 HFE (ENSPCIG00000008663) ENSPCIG00000008666 ENSPCIG00000032287 ENSPCIG00000031525 ENSPCIG00000035745 #21 ENSPCIG00000024809 ENSPCIG00000033159 ENSPCIG00000024792 ENSPCIG00000035138 ENSPCIG00000030835 BTN1A1 (ENSPCIG00000024787) ENSPCIG00000036834 ENSPCIG00000027495 PIK3R5 (ENSPCIG00000000380) ENSPCIG00000000324 koala MODERN SPECIES 167 ZNF496 (ENSPCIG00000015280) ENSPCIG00000015334 TRIM11 (ENSPCIG00000015276) ENSPCIG00000037166 ENSPCIG00000015238 ##27 ENSPCIG00000031167 #28 ENSPCIG00000033149 ENSPCIG00000031273 ENSPCIG00000032592 ENSPCIG00000031487 ENSPCIG00000031433 ENSPCIG00000036717 ENSPCIG00000034762 ENSPCIG00000014676 ENSPCIG00000031126 ENSPCIG00000031257 #22 ENSPCIG00000034498 #22 HFE (ENSPCIG00000008663) ENSPCIG00000008666 ENSPCIG00000032287 ENSPCIG00000031525 ENSPCIG00000035745 #21 ENSPCIG00000024809 ENSPCIG00000033159 ENSPCIG00000024792 ENSPCIG00000035138 ENSPCIG00000030835 BTN1A1 (ENSPCIG00000024787) ENSPCIG00000036834 ENSPCIG00000027495 PIK3R5 (ENSPCIG00000000380) Common wonbat DUPLICATION Common wonbat MODERN SPECIES 746 ENSVURG00010005173 ##27 ENSVURG00010005043 ENSVURG00010005034 ENSVURG00010005028 ##22 ENSVURG00010004997 ##27 ENSVURG00010004986 #22 ENSVURG00010004971 ENSVURG00010004956 ENSVURG00010004911 ENSVURG00010004824 ENSVURG00010004807 #21 ENSVURG00010004804 ENSVURG00010004790 ENSVURG00010004733 ENSVURG00010004681 ENSVURG00010004665 BTN1A1 (ENSVURG00010004551) ENSVURG00010004530 ZNF286A (ENSVURG00010004522) PIK3R5 (ENSVURG00010004490) ENSVURG00010004479 Common wonbat MODERN SPECIES 1007 ENSVURG00010015984 ENSVURG00010015977 ENSVURG00010015968 #21 ENSVURG00010015963 #21 ENSVURG00010015957 #21 ENSVURG00010015953 #21 ENSVURG00010015945 #21 ENSVURG00010015942 ENSVURG00010015933 #21 ENSVURG00010015924 ENSVURG00010015916 #22 ENSVURG00010015906 ENSVURG00010015903 ENSVURG00010015897 ENSVURG00010015891 ENSVURG00010015885 #22 ENSVURG00010015875 ENSVURG00010015872 ENSVURG00010015866 ENSVURG00010015862 ENSVURG00010015803 ENSVURG00010015790 ENSVURG00010015766 ENSVURG00010015753 ENSVURG00010015733 ENSVURG00010015716 ENSVURG00010015671 ENSVURG00010015660 ENSVURG00010015651 ENSVURG00010015635 ENSVURG00010015618 Common wonbat MODERN SPECIES 968 ENSVURG00010007401 ENSVURG00010007406 ENSVURG00010007414 #22 ENSVURG00010007421 #21 Common wonbat MODERN SPECIES 1007 ENSVURG00010015716 ENSVURG00010015733 ENSVURG00010015753 ENSVURG00010015766 ENSVURG00010015790 ENSVURG00010015803 ENSVURG00010015862 ENSVURG00010015866 ENSVURG00010015872 ENSVURG00010015875 ENSVURG00010015885 #22 ENSVURG00010015891 ENSVURG00010015897 ENSVURG00010015903 ENSVURG00010015906 ENSVURG00010015916 #22 ENSVURG00010015924 ENSVURG00010015933 #21 ENSVURG00010015942 ENSVURG00010015945 #21 ENSVURG00010015953 #21 ENSVURG00010015957 #21 ENSVURG00010015963 #21 ENSVURG00010015968 #21 ENSVURG00010015977 ENSVURG00010015984 ENSVURG00010015986 ENSVURG00010015991 ENSVURG00010000347 ENSVURG00010000365 ENSVURG00010000395 Common wonbat MODERN SPECIES 1007 ENSVURG00010000895 ENSVURG00010000922 ENSVURG00010000937 ENSVURG00010000953 ENSVURG00010000996 ENSVURG00010001021 ENSVURG00010001047 ENSVURG00010001073 ENSVURG00010001132 ENSVURG00010001164 ENSVURG00010001172 ##22 ENSVURG00010001177 ENSVURG00010001199 ENSVURG00010001206 ENSVURG00010001221 ENSVURG00010001308 #22 ENSVURG00010001317 ENSVURG00010001341 #21 ENSVURG00010001350 ENSVURG00010001356 #21 ENSVURG00010001364 #21 ENSVURG00010001372 #21 ENSVURG00010001379 #21 ENSVURG00010001381 #21 ENSVURG00010001404 ENSVURG00010001436 ENSVURG00010001444 ENSVURG00010001469 ENSVURG00010001489 ENSVURG00010001495 ENSVURG00010001505 Opossum DUPLICATION Opossum MODERN SPECIES 1 PRPF3 (ENSMODG00000018774) MRPS21 (ENSMODG00000018783) ENSMODG00000018781 APH1A (ENSMODG00000018778) CA14 (ENSMODG00000018776) ENSMODG00000027412 ENSMODG00000018772 VPS45 (ENSMODG00000018771) OTUD7B (ENSMODG00000018770) MTMR11 (ENSMODG00000018769) SF3B4 (ENSMODG00000018767) SV2A (ENSMODG00000018766) ENSMODG00000044619 ENSMODG00000049030 ENSMODG00000050604 ENSMODG00000043839 #22 ENSMODG00000036508 HIST1H4I (ENSMODG00000044293) #21 HIST1H4I (ENSMODG00000046729) #21 HIST1H4I (ENSMODG00000045825) #21 HIST1H4I (ENSMODG00000043804) #21 HIST1H4I (ENSMODG00000037943) #21 ENSMODG00000038666 HJV (ENSMODG00000018756) TXNIP (ENSMODG00000018755) ENSMODG00000018754 ANKRD34A (ENSMODG00000023216) LIX1L (ENSMODG00000018753) RBM8A (ENSMODG00000047652) ENSMODG00000018751 PEX11B (ENSMODG00000018750) Opossum MODERN SPECIES 1 RACK1 (ENSMODG00000004091) ENSMODG00000003964 TRIM7 (ENSMODG00000003934) ENSMODG00000003901 ENSMODG00000036746 ENSMODG00000037511 HIST1H4I (ENSMODG00000048847) #21 HIST1H4I (ENSMODG00000044280) #21 HIST1H4I (ENSMODG00000039062) #21 ENSMODG00000042315 ENSMODG00000040444 #22 ENSMODG00000042479 ENSMODG00000050148 ENSMODG00000051254 ENSMODG00000050666 ENSMODG00000036588 #22 ENSMODG00000046657 ENSMODG00000003817 BTNL9 (ENSMODG00000003790) ENSMODG00000023693 MGAT1 (ENSMODG00000003277) ENSMODG00000048266 ENSMODG00000039382 ENSMODG00000039164 ENSMODG00000045185 ENSMODG00000048797 ENSMODG00000003171 PTGER3 (ENSMODG00000003176) ENSMODG00000003163 ENSMODG00000012123 monDomV1R1213 (ENSMODG00000042132) Opossum MODERN SPECIES 1 ENSMODG00000048797 ENSMODG00000045185 ENSMODG00000039164 ENSMODG00000039382 ENSMODG00000048266 MGAT1 (ENSMODG00000003277) ENSMODG00000023693 BTNL9 (ENSMODG00000003790) ENSMODG00000003817 ENSMODG00000046657 ENSMODG00000036588 #22 ENSMODG00000050666 ENSMODG00000051254 ENSMODG00000050148 ENSMODG00000042479 ENSMODG00000040444 #22 ENSMODG00000042315 HIST1H4I (ENSMODG00000039062) #21 HIST1H4I (ENSMODG00000044280) #21 HIST1H4I (ENSMODG00000048847) #21 ENSMODG00000037511 ENSMODG00000036746 ENSMODG00000003901 TRIM7 (ENSMODG00000003934) ENSMODG00000003964 RACK1 (ENSMODG00000004091) ENSMODG00000004101 ZKSCAN1 (ENSMODG00000004145) ENSMODG00000028855 ENSMODG00000050533 ZNF3 (ENSMODG00000004159) Platypus DUPLICATION Platypus DUPLICATION Platypus MODERN SPECIES 88 ENSOANG00000040130 ENSOANG00000045306 ENSOANG00000038051 ENSOANG00000038321 ENSOANG00000048075 ENSOANG00000047142 ENSOANG00000037816 ENSOANG00000045607 ##22 ENSOANG00000037825 #21 ENSOANG00000051301 ENSOANG00000045094 ENSOANG00000038387 ENSOANG00000045700 ##27 ENSOANG00000039935 ENSOANG00000000173 ENSOANG00000046785 #22 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #22 H1-2 (ENSOANG00000047788) ENSOANG00000042244 ##22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 ENSOANG00000038871 #21 ENSOANG00000049432 ENSOANG00000038547 #22 ENSOANG00000047517 #21 ENSOANG00000048954 ##22 ENSOANG00000044997 #21 ENSOANG00000038271 ENSOANG00000049942 Platypus MODERN SPECIES 88 ENSOANG00000047522 ENSOANG00000038285 ##27 ENSOANG00000047856 ENSOANG00000050887 ENSOANG00000040521 ENSOANG00000039179 #21 ENSOANG00000044108 ENSOANG00000050614 ENSOANG00000036855 ENSOANG00000051035 #21 ENSOANG00000049861 #21 ENSOANG00000046437 ENSOANG00000037672 ##27 ENSOANG00000038211 ENSOANG00000048323 ENSOANG00000048678 #22 ENSOANG00000036523 SDHC (ENSOANG00000048957) MPZ (ENSOANG00000041826) PCP4L1 (ENSOANG00000037665) NR1I3 (ENSOANG00000041107) TOMM40L (ENSOANG00000047077) ENSOANG00000039172 ENSOANG00000038491 NDUFS2 (ENSOANG00000047151) ENSOANG00000046313 B4GALT3 (ENSOANG00000048632) ENSOANG00000038415 ENSOANG00000036199 ENSOANG00000044116 ENSOANG00000050912 Platypus MODERN SPECIES 88 ENSOANG00000038321 ENSOANG00000048075 ENSOANG00000047142 ENSOANG00000037816 ENSOANG00000045607 ##22 ENSOANG00000037825 #21 ENSOANG00000051301 ENSOANG00000045094 ENSOANG00000038387 ENSOANG00000045700 ##27 ENSOANG00000039935 ENSOANG00000000173 ENSOANG00000046785 #22 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #22 H1-2 (ENSOANG00000047788) ENSOANG00000042244 ##22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 ENSOANG00000038871 #21 ENSOANG00000049432 ENSOANG00000038547 #22 ENSOANG00000047517 #21 ENSOANG00000048954 ##22 ENSOANG00000044997 #21 ENSOANG00000038271 ENSOANG00000049942 ENSOANG00000044699 #22 ENSOANG00000040358 ENSOANG00000040609 Platypus MODERN SPECIES 88 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #22 H1-2 (ENSOANG00000047788) ENSOANG00000042244 ##22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 ENSOANG00000038871 #21 ENSOANG00000049432 ENSOANG00000038547 #22 ENSOANG00000047517 #21 ENSOANG00000048954 ##22 ENSOANG00000044997 #21 ENSOANG00000038271 ENSOANG00000049942 ENSOANG00000044699 #22 ENSOANG00000040358 ENSOANG00000040609 H2AC21 (ENSOANG00000047209) ENSOANG00000047921 ENSOANG00000041422 ENSOANG00000036404 ENSOANG00000039121 ENSOANG00000049615 ENSOANG00000036630 ENSOANG00000020663 ENSOANG00000019718 ENSOANG00000037103 ENSOANG00000031496 ENSOANG00000045163 VANGL2 (ENSOANG00000046213) Platypus MODERN SPECIES 88 ENSOANG00000045094 ENSOANG00000038387 ENSOANG00000045700 ##27 ENSOANG00000039935 ENSOANG00000000173 ENSOANG00000046785 #22 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #22 H1-2 (ENSOANG00000047788) ENSOANG00000042244 ##22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 ENSOANG00000038871 #21 ENSOANG00000049432 ENSOANG00000038547 #22 ENSOANG00000047517 #21 ENSOANG00000048954 ##22 ENSOANG00000044997 #21 ENSOANG00000038271 ENSOANG00000049942 ENSOANG00000044699 #22 ENSOANG00000040358 ENSOANG00000040609 H2AC21 (ENSOANG00000047209) ENSOANG00000047921 ENSOANG00000041422 ENSOANG00000036404 ENSOANG00000039121 ENSOANG00000049615 ENSOANG00000036630 Sauria ANCESTRAL SPECIES 78 ENSGT01100000263474.a.b.a.d #20 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263474.a.b.b.j.a #28 ENSGT01100000263514.A.f ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263474.a.b.b.j.b.a #28 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263514.A.e.a ENSGT00940000153118.db.a.a.a ENSGT01100000263474.a.b.b.j.b.b.b.b #28 ENSGT00950000183089 #18 ENSGT01100000263474.a.b.b.j.b.b.a #28 ENSGT00940000153118.db.a.a.b.a.b Lepidosauria ANCESTRAL SPECIES 171 ENSGT01100000263474.a.b.b.j.b.b.b.b #28 ENSGT00940000156302 ENSGT01100000263559.B #22 ENSGT00950000183089 #18 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b.j.b.b.b.a.a #28 ENSGT00940000153092.a.a ENSGT01100000263559.A.f ##22 ENSGT00940000153118.db.a.a.b.b tuatara DUPLICATION tuatara MODERN SPECIES 236 ENSSPUG00000018728 ENSSPUG00000018726 ##22 ENSSPUG00000018723 ENSSPUG00000018720 ENSSPUG00000018719 #28 ENSSPUG00000018716 #28 ENSSPUG00000018713 ENSSPUG00000018710 #22 PFAS (ENSSPUG00000018703) RANGRF (ENSSPUG00000018698) SLC25A35 (ENSSPUG00000018695) ENSSPUG00000018688 ARHGEF15 (ENSSPUG00000018677) PLOD3 (ENSSPUG00000018633) ZNHIT1 (ENSSPUG00000018605) FIS1 (ENSSPUG00000018599) CLDN15 (ENSSPUG00000018594) ENSSPUG00000018587 ENSSPUG00000018580 ENSSPUG00000018577 ENSSPUG00000018573 #21 ENSSPUG00000018571 #21 tuatara DUPLICATION tuatara MODERN SPECIES 1221 ENSSPUG00000017863 ENSSPUG00000017860 ENSSPUG00000017853 ENSSPUG00000017850 TM9SF1 (ENSSPUG00000017843) TSSK4 (ENSSPUG00000017835) ENSSPUG00000017826 GMPR2 (ENSSPUG00000017818) ENSSPUG00000017806 TGM1 (ENSSPUG00000017783) RABGGTA (ENSSPUG00000017767) NOP9 (ENSSPUG00000017755) CIDEB (ENSSPUG00000017744) ENSSPUG00000017736 ENSSPUG00000017734 #21 ENSSPUG00000017731 #22 ENSSPUG00000017727 #18 ENSSPUG00000017726 #21 ENSSPUG00000017721 ENSSPUG00000017718 #18 H1-1 (ENSSPUG00000017701) ENSSPUG00000017696 ENSSPUG00000017692 #21 ENSSPUG00000017681 #18 ENSSPUG00000017676 #21 ENSSPUG00000017671 #18 ENSSPUG00000017664 ENSSPUG00000017660 #21 ENSSPUG00000017653 #21 ENSSPUG00000017647 #21 ENSSPUG00000017643 tuatara MODERN SPECIES 1528 ENSSPUG00000010038 ENSSPUG00000010048 ENSSPUG00000010068 ENSSPUG00000010092 ENSSPUG00000010105 #28 ENSSPUG00000010120 #28 H2AC7 (ENSSPUG00000010127) ENSSPUG00000010130 #22 ENSSPUG00000010176 ZNF581 (ENSSPUG00000010209) U2AF2 (ENSSPUG00000010229) EPN1 (ENSSPUG00000010256) ENSSPUG00000010289 ISOC2 (ENSSPUG00000010332) SHISA7 (ENSSPUG00000010345) UBE2S (ENSSPUG00000010366) RCVRN (ENSSPUG00000010379) RPL28 (ENSSPUG00000010390) ENSSPUG00000010413 TMEM238 (ENSSPUG00000010434) ENSSPUG00000010444 Episquamata ANCESTRAL SPECIES 5 ENSGT01030000234535.A.w ENSGT00390000018426 ENSGT01030000234558.A.a.a.a ENSGT01030000234571.b.b.a.a.b ENSGT00940000165211 ENSGT00940000160771 ENSGT00390000013834 ENSGT00940000161324 ENSGT00390000007600 ENSGT01100000263559.A.f ##22 ENSGT00940000160426 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a #28 ENSGT00990000203553.c.a.a.b.a.a.a.b ENSGT01100000263474.a.b.b.j.b.b.b.a.b.b.a #28 ENSGT00940000156302.jc ENSGT01100000263559.B #22 ENSGT01100000263504.b ENSGT01100000263514.A.f.o.a ENSGT00950000183089 #18 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.b.a.b #28 ENSGT00940000153118.db.b ENSGT00940000153402 ENSGT01100000263537.a ENSGT00520000055620.A.c ENSGT00390000014495 ENSGT00940000153649.B ENSGT00940000153886.a.a ENSGT00940000154888.`b.a ENSGT00550000075058 ENSGT00940000162245 Laterata ANCESTRAL SPECIES 6 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT00940000171081 ENSGT00390000013440 ENSGT01100000263954 ENSGT01100000263559.A.f ##22 ENSGT00940000153092.a.a ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.a #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.b.a #28 ENSGT00940000156302.jc ENSGT01100000263559.B #22 ENSGT00940000153125.F ENSGT01100000263515.a.b.a.b.a ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b.g ENSGT00950000182961.a.b.b.h ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 4 ENSPMRG00000013115 ENSPMRG00000013120 ENSPMRG00000013126 PLOD3 (ENSPMRG00000013206) ARHGEF15 (ENSPMRG00000013487) ENSPMRG00000013520 SLC25A35 (ENSPMRG00000013600) RANGRF (ENSPMRG00000013608) ENSPMRG00000013625 PFAS (ENSPMRG00000013655) ENSPMRG00000013675 ##22 ENSPMRG00000013678 ENSPMRG00000013680 #28 ENSPMRG00000013682 #17 ENSPMRG00000013687 H3C15 (ENSPMRG00000013691) #22 ENSPMRG00000013693 #19 ENSPMRG00000013696 ENSPMRG00000013701 #19 ENSPMRG00000013705 #28 ENSPMRG00000013707 #21 ENSPMRG00000013710 ENSPMRG00000013712 ENSPMRG00000013715 #28 ENSPMRG00000013718 #28 ENSPMRG00000013720 #21 ENSPMRG00000013724 ENSPMRG00000013730 RPGRIP1 (ENSPMRG00000013738) SUPT16H (ENSPMRG00000013774) CHD8 (ENSPMRG00000013813) Common wall lizard MODERN SPECIES 10 ENSPMRG00000007180 ENSPMRG00000007187 ENSPMRG00000007195 FBXL12 (ENSPMRG00000007198) UBL5 (ENSPMRG00000007209) ENSPMRG00000007214 PIN1 (ENSPMRG00000007220) ENSPMRG00000007236 OLFM2 (ENSPMRG00000007242) ENSPMRG00000007254 ENSPMRG00000007274 RDH8 (ENSPMRG00000007284) ENSPMRG00000007295 #21 ENSPMRG00000007301 #28 ENSPMRG00000007306 H3C13 (ENSPMRG00000007311) #22 ENSPMRG00000007315 ENSPMRG00000007324 #21 ENSPMRG00000007330 ENSPMRG00000007336 #28 HDAC7 (ENSPMRG00000007354) ENSPMRG00000007416 SLC48A1 (ENSPMRG00000007424) ENSPMRG00000007434 ENSPMRG00000007445 ENSPMRG00000007457 ENDOU (ENSPMRG00000007465) ENSPMRG00000007476 PPP1R1A (ENSPMRG00000007492) ENSPMRG00000007497 ENSPMRG00000007503 Common wall lizard MODERN SPECIES 1 STRA8 (ENSPMRG00000011902) WDR91 (ENSPMRG00000011912) TMEM140 (ENSPMRG00000011972) AGBL3 (ENSPMRG00000011977) PDE6H (ENSPMRG00000011991) ARHGDIB (ENSPMRG00000011997) ENSPMRG00000012002 ENSPMRG00000012008 MGP (ENSPMRG00000012012) ENSPMRG00000012015 ENSPMRG00000012019 SMCO3 (ENSPMRG00000012022) ENSPMRG00000012026 ENSPMRG00000012030 ##22 ENSPMRG00000012040 #28 ENSPMRG00000012042 #22 ENSPMRG00000012044 ENSPMRG00000012046 ENSPMRG00000012052 APOLD1 (ENSPMRG00000012062) DDX47 (ENSPMRG00000012066) ENSPMRG00000012071 ENSPMRG00000019714 ENSPMRG00000019720 ENSPMRG00000019726 ENSPMRG00000019731 FAM234B (ENSPMRG00000019736) GSG1 (ENSPMRG00000019745) ENSPMRG00000019749 EMP1 (ENSPMRG00000019757) ENSPMRG00000019785 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 38 ENSSMRG00000003927 IPO4 (ENSSMRG00000003911) TM9SF1 (ENSSMRG00000003908) ENSSMRG00000003905 CHMP4A (ENSSMRG00000003900) ENSSMRG00000003897 NEDD8 (ENSSMRG00000003894) GMPR2 (ENSSMRG00000003886) ENSSMRG00000003878 TGM1 (ENSSMRG00000003863) RABGGTA (ENSSMRG00000003846) NOP9 (ENSSMRG00000003844) CIDEB (ENSSMRG00000003843) ENSSMRG00000003841 ENSSMRG00000003839 #28 ENSSMRG00000003828 #22 PDZD11 (ENSSMRG00000003824) KIF4A (ENSSMRG00000003797) TAF9 (ENSSMRG00000003792) ENSSMRG00000003774 ENSSMRG00000003758 #21 ENSSMRG00000003751 ENSSMRG00000003750 ENSSMRG00000003743 #27 PER1 (ENSSMRG00000003730) VAMP2 (ENSSMRG00000003721) AURKB (ENSSMRG00000003714) TMEM107 (ENSSMRG00000003702) ENSSMRG00000003690 HES7 (ENSSMRG00000003687) ENSSMRG00000003683 Argentine black and white tegu MODERN SPECIES 6 NUP205 (ENSSMRG00000014005) POLR3H (ENSSMRG00000014008) CNOT4 (ENSSMRG00000014010) ENSSMRG00000014012 STRA8 (ENSSMRG00000014027) WDR91 (ENSSMRG00000014028) ENSSMRG00000014073 TMEM140 (ENSSMRG00000014074) AGBL3 (ENSSMRG00000014075) PDE6H (ENSSMRG00000014076) ARHGDIB (ENSSMRG00000014087) ERP27 (ENSSMRG00000014089) MGP (ENSSMRG00000014092) ENSSMRG00000014093 ENSSMRG00000014094 ENSSMRG00000014097 #22 ENSSMRG00000014098 ENSSMRG00000014099 APOLD1 (ENSSMRG00000014100) DDX47 (ENSSMRG00000014101) ENSSMRG00000014102 ENSSMRG00000014103 HEBP1 (ENSSMRG00000014104) ENSSMRG00000014105 FAM234B (ENSSMRG00000014106) GSG1 (ENSSMRG00000014107) EMP1 (ENSSMRG00000014108) ENSSMRG00000014109 GRIN2B (ENSSMRG00000014110) ATF7IP (ENSSMRG00000014112) PLBD1 (ENSSMRG00000014113) Toxicofera ANCESTRAL SPECIES 142 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.b #28 ENSGT01100000263559.B #22 ENSGT00940000153125.F Lizard MODERN SPECIES 1013 IPO4 (ENSACAG00000003973) ENSACAG00000037232 TM9SF1 (ENSACAG00000010366) ENSACAG00000003999 ENSACAG00000043716 GMPR2 (ENSACAG00000004007) TINF2 (ENSACAG00000004097) ENSACAG00000004106 RABGGTA (ENSACAG00000004170) CIDEB (ENSACAG00000004392) ENSACAG00000044900 ENSACAG00000043566 ENSACAG00000004420 #22 ENSACAG00000004423 #18 ENSACAG00000004430 ENSACAG00000004469 ENSACAG00000004688 ENSACAG00000042496 ENSACAG00000004696 ENSACAG00000045559 #21 ENSACAG00000004700 ENSACAG00000036931 #18 PER1 (ENSACAG00000004715) ENSACAG00000023444 ENSACAG00000004832 TMEM107 (ENSACAG00000004902) ENSACAG00000045393 ENSACAG00000029011 Elapidae ANCESTRAL SPECIES 2 ENSGT00390000001945 ENSGT00640000091578 ENSGT00940000161852.y.b ENSGT00940000159148 ENSGT00940000162394 ENSGT00940000154535.C ENSGT01000000214708 ENSGT00940000167399.a ENSGT00940000161385 ENSGT01060000248528.b.kh #21 ENSGT01100000263506.a ENSGT00940000153125.D ENSGT01010000230061 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.a #28 ENSGT00940000160426 ENSGT01100000263559.B #22 ENSGT00940000153125.F ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.b #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.b #28 ENSGT00940000159065 ENSGT00390000002307 ENSGT00940000159931 ENSGT00940000154126.h.a ENSGT00530000063825.B ENSGT00940000160217 ENSGT00940000160763 ENSGT00940000161232 ENSGT00940000160712.i ENSGT00390000016619.b.d.a ENSGT00940000156784 ENSGT00940000158061 Indian cobra MODERN SPECIES 337 CHMP4A (ENSNNAG00000006999) ENSNNAG00000007007 NEDD8 (ENSNNAG00000007020) GMPR2 (ENSNNAG00000007054) TGM1 (ENSNNAG00000007239) RABGGTA (ENSNNAG00000007419) ENSNNAG00000007434 #28 ENSNNAG00000007442 #28 ENSNNAG00000007450 ENSNNAG00000007467 PDZD11 (ENSNNAG00000007476) ENSNNAG00000007513 TAF9 (ENSNNAG00000007565) ENSNNAG00000007605 ENSNNAG00000007621 #21 ENSNNAG00000007640 #22 ENSNNAG00000007647 #18 ENSNNAG00000007670 AURKB (ENSNNAG00000007690) ENSNNAG00000007752 ALOXE3 (ENSNNAG00000007800) ENSNNAG00000008177 GUCY2D (ENSNNAG00000008330) ENSNNAG00000008515 TRAPPC1 (ENSNNAG00000008533) ENSNNAG00000008551 KCNAB3 (ENSNNAG00000008574) CHD3 (ENSNNAG00000009480) CYB5D1 (ENSNNAG00000018023) NAA38 (ENSNNAG00000018028) ENSNNAG00000018031 Elapidae_a ANCESTRAL SPECIES 52 ENSGT00390000001945 ENSGT00640000091578 ENSGT00940000161852.y.b ENSGT00940000159148 ENSGT00940000162394 ENSGT00940000154535.C ENSGT01000000214708 ENSGT00940000167399.a ENSGT00510000050353 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.a #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.b.a.a.b #28 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.b.a.b #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.a #28 ENSGT00940000160426 ENSGT01100000263559.B #22 ENSGT00940000153125.F ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.b #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.b #28 ENSGT00940000159065 ENSGT00390000002307 ENSGT00940000159931 ENSGT00940000154126.h.a ENSGT00530000063825.B ENSGT00940000160217 ENSGT00940000160763 ENSGT00940000161232 ENSGT00940000160712.j ENSGT00940000160712.i ENSGT00390000016619.b.d.a ENSGT00940000156784 Blue-lipped sea krait MODERN SPECIES 5358 H3C13 (ENSLLTG00000004401) #22 ENSLLTG00000004397 ENSLLTG00000004388 #28 ENSLLTG00000004363 Acanthophiinae ANCESTRAL SPECIES 52 ENSGT00640000091578 ENSGT00940000161852.y.b ENSGT00940000159148 ENSGT00940000162394 ENSGT00940000154535.C ENSGT01000000214708 ENSGT00940000167399.a ENSGT00510000050353 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.a #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.b.a.a.b #28 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b.j.b.b.b.a.a.a.a.b.b.a.a.a #28 ENSGT00940000153125.D.e.b ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.a #28 ENSGT00940000160426 ENSGT01100000263559.B #22 ENSGT00940000153125.F ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.b #28 ENSGT01100000263474.a.b.b.j.b.b.b.a.b.a.a.b #28 ENSGT00940000159065 ENSGT00390000002307 ENSGT00940000159931 ENSGT00940000154126.h.a ENSGT00530000063825.B ENSGT00940000160217 ENSGT00940000160763 ENSGT00940000161232 ENSGT00940000160712.i ENSGT00390000016619.b.d.a ENSGT00940000156784 ENSGT00940000158061 Mainland tiger snake MODERN SPECIES 210 ENSNSUG00000018339 CLDN15 (ENSNSUG00000018340) FIS1 (ENSNSUG00000018341) ENSNSUG00000018342 ZNHIT1 (ENSNSUG00000018343) PLOD3 (ENSNSUG00000018345) ENSNSUG00000018456 ENSNSUG00000018457 ENSNSUG00000018458 RANGRF (ENSNSUG00000018459) ENSNSUG00000018460 PFAS (ENSNSUG00000018461) ENSNSUG00000018462 ENSNSUG00000018463 ENSNSUG00000018464 #28 H3C14 (ENSNSUG00000018465) #22 ENSNSUG00000018466 #21 ENSNSUG00000018467 #28 ENSNSUG00000018468 ENSNSUG00000018469 ENSNSUG00000018470 ENSNSUG00000018471 ENSNSUG00000018472 ENSNSUG00000018473 ENSNSUG00000018474 RAB2B (ENSNSUG00000018964) ENSNSUG00000018965 METTL3 (ENSNSUG00000018966) ENSNSUG00000018968 ENSNSUG00000018969 OR4E1 (ENSNSUG00000018970) Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 1031 ENSPTXG00000016138 #21 ENSPTXG00000016137 #22 Eastern brown snake MODERN SPECIES 63 ENSPTXG00000010773 ENSPTXG00000010771 ENSPTXG00000010769 ENSPTXG00000010768 FBXL12 (ENSPTXG00000010764) UBL5 (ENSPTXG00000010763) PIN1 (ENSPTXG00000010762) ENSPTXG00000010761 OLFM2 (ENSPTXG00000010760) ENSPTXG00000010755 ENSPTXG00000010751 ENSPTXG00000010748 ENSPTXG00000010746 #21 ENSPTXG00000010745 #28 H2AC7 (ENSPTXG00000010743) H3C13 (ENSPTXG00000010742) #22 ENSPTXG00000010740 ENSPTXG00000010739 #21 ENSPTXG00000010738 ENSPTXG00000010737 #28 HDAC7 (ENSPTXG00000010734) ENSPTXG00000010726 SLC48A1 (ENSPTXG00000010723) RAPGEF3 (ENSPTXG00000010678) ENSPTXG00000010668 ENDOU (ENSPTXG00000010666) NEUROD4 (ENSPTXG00000010664) ENSPTXG00000010661 PPP1R1A (ENSPTXG00000010660) PDE1B (ENSPTXG00000010658) ENSPTXG00000010656 Archelosauria ANCESTRAL SPECIES 76 ENSGT00940000153118.db.a.a.b.a.a.b ENSGT01100000263474.a.b.b.j.a.a.b #28 ENSGT01100000263514.A.f ENSGT01060000248528.b.kh #21 ENSGT01100000263559.A.f ##22 ENSGT00940000156302 ENSGT01100000263474.a.b.b.j.a.a.a #28 ENSGT01100000263559.B #22 ENSGT01100000263506.a ENSGT00940000153118.db.a.b ENSGT01100000263474.a.b.b.j.b.b.a #28 ENSGT00950000183089.s.a.a #18 ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a #28 ENSGT00940000153118.db.a.a.b.a.a.a.b Archosauria ANCESTRAL SPECIES 190 ENSGT01100000263559.B #22 ENSGT01100000263506.a Aves ANCESTRAL SPECIES 1 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT01030000234601.c.a.b ENSGT00940000171081 ENSGT00390000013440.e ENSGT01100000263840 ENSGT01100000263474.a.b.b.k #28 ENSGT00940000153118.db.a.b ENSGT00950000183089.s.a.a #18 ENSGT01100000263559.B #22 ENSGT01100000263506.a ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.b ENSGT00940000160320 ENSGT00410000026495.B ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 Neognathae ANCESTRAL SPECIES 96 ENSGT00940000153118.db.a.a.b.a.a.b.b ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.a #28 ENSGT01100000263559.B #22 ENSGT01100000263506.a Galloanserae ANCESTRAL SPECIES 69 ENSGT01100000263559.A.f ##22 ENSGT01100000263474.a.b.b.j.b.a #28 ENSGT01060000248528.b.jh.a.a.b #21 ENSGT00940000153118.db.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.b #28 ENSGT00950000183089.s.a.a.b.b.a.a #18 ENSGT01100000263559.B #22 ENSGT01100000263506.a Phasianidae ANCESTRAL SPECIES ENSGT01050000244814.a.a.a.b ENSGT00530000063694.b ENSGT00410000026495.B ENSGT00940000160320 ENSGT00950000182961.a.b.b ENSGT00940000155774.b ENSGT01030000234599.a.b ENSGT00940000161385.m.b.a ENSGT01100000263474.a.b.b.j.a.a.b #28 ENSGT01100000263514.A.f.v ENSGT01060000248528.b.jh.a.a.b #21 ENSGT01100000263474.a.b.b.j.b.a #28 ENSGT00940000153118.db.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.b #28 ENSGT00950000183089.s.a.a.b.b.a.a #18 ENSGT01100000263559.B #22 ENSGT01100000263506.a ENSGT01100000264469 ENSGT00390000013440.e ENSGT01030000234601.c.a.b ENSGT00410000026290.j ENSGT00390000003753.b ENSGT00930000151058 ENSGT00390000006233.c.a.b ENSGT00390000013260.C ENSGT00940000160916 ENSGT00390000014089 ENSGT00960000189329 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a Phasianidae_b ANCESTRAL SPECIES 9 ENSGT00940000153118.db.a.a.b.a.a.a.b ENSGT00990000203553.c.a.b ENSGT01100000263559.A.f ##22 ENSGT01100000263474.a.b.b.j.b.a #28 ENSGT00940000153118.db.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.b #28 ENSGT00950000183089.s.a.a.b.b.a.a #18 ENSGT01100000263559.B #22 ENSGT01100000263506.a ENSGT01100000264469 ENSGT00390000013440.e ENSGT01030000234601.c.a.b ENSGT00530000066362 ENSGT00390000003753.b ENSGT00930000151058 ENSGT00390000006233.c.a.b ENSGT00390000013260.C ENSGT00940000160916 ENSGT00390000014089 ENSGT00960000189329 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a Chicken DUPLICATION Chicken DUPLICATION Chicken MODERN SPECIES HIST1H2B5 (ENSGALG00010014375) #28 ENSGALG00010012324 ENSGALG00010014449 #18 H2B-I (ENSGALG00010011987) #28 HIST1H101 (ENSGALG00010012144) #18 ENSGALG00010012307 ENSGALG00010012317 ENSGALG00010014431 #18 HIST1H3H (ENSGALG00010012277) #22 HIST1H110 (ENSGALG00010011989) #18 HIST1H2B7 (ENSGALG00010014416) #28 H2B-VII (ENSGALG00010014403) #28 HIST1H3H (ENSGALG00010012266) ##22 H2AFJ (ENSGALG00010012248) ENSGALG00010012179 HIST1H3H (ENSGALG00010012169) #22 H2B-I (ENSGALG00010012157) HIST1H2A4L1 (ENSGALG00010013579) WBP11 (ENSGALG00010012127) SMCO3 (ENSGALG00010012117) ART4 (ENSGALG00010012098) OC3 (ENSGALG00010012092) MGP (ENSGALG00010012083) ERP27 (ENSGALG00010012069) ARHGDIB (ENSGALG00010012059) PDE6H (ENSGALG00010012048) ENSGALG00010012035 ENSGALG00010014468 TMEM140 (ENSGALG00010012028) ENSGALG00010012022 WDR91 (ENSGALG00010012016) Chicken MODERN SPECIES H2AFJ (ENSGALG00010012248) HIST1H3H (ENSGALG00010012266) ##22 H2B-VII (ENSGALG00010014403) #28 HIST1H2B7 (ENSGALG00010014416) #28 HIST1H110 (ENSGALG00010011989) #18 HIST1H3H (ENSGALG00010012277) #22 ENSGALG00010014431 #18 ENSGALG00010012317 ENSGALG00010012307 HIST1H101 (ENSGALG00010012144) #18 H2B-I (ENSGALG00010011987) #28 ENSGALG00010014449 #18 ENSGALG00010012324 HIST1H2B5 (ENSGALG00010014375) #28 ENSGALG00010012331 HIST1H3H (ENSGALG00010013592) #22 HIST1H3H (ENSGALG00010012338) ##22 H2B-I (ENSGALG00010012345) #28 HIST1H2A4L1 (ENSGALG00010012350) APOLD1 (ENSGALG00010009659) DDX47 (ENSGALG00010009672) ENSGALG00010009689 HEBP1 (ENSGALG00010010995) ENSGALG00010011013 FAM234B (ENSGALG00010011027) GSG1 (ENSGALG00010011038) EMP1 (ENSGALG00010011080) GRIN2B (ENSGALG00010011090) ATF7IP (ENSGALG00010011144) PLBD1 (ENSGALG00010011231) GUCY2C (ENSGALG00010011323) Chicken MODERN SPECIES ERP27 (ENSGALG00010012069) MGP (ENSGALG00010012083) OC3 (ENSGALG00010012092) ART4 (ENSGALG00010012098) SMCO3 (ENSGALG00010012117) WBP11 (ENSGALG00010012127) HIST1H2A4L1 (ENSGALG00010013579) H2B-I (ENSGALG00010012157) HIST1H3H (ENSGALG00010012169) #22 ENSGALG00010012179 H2AFJ (ENSGALG00010012248) HIST1H3H (ENSGALG00010012266) ##22 H2B-VII (ENSGALG00010014403) #28 HIST1H2B7 (ENSGALG00010014416) #28 HIST1H110 (ENSGALG00010011989) #18 HIST1H3H (ENSGALG00010012277) #22 ENSGALG00010014431 #18 ENSGALG00010012317 ENSGALG00010012307 HIST1H101 (ENSGALG00010012144) #18 H2B-I (ENSGALG00010011987) #28 ENSGALG00010014449 #18 ENSGALG00010012324 HIST1H2B5 (ENSGALG00010014375) #28 ENSGALG00010012331 HIST1H3H (ENSGALG00010013592) #22 HIST1H3H (ENSGALG00010012338) ##22 H2B-I (ENSGALG00010012345) #28 HIST1H2A4L1 (ENSGALG00010012350) APOLD1 (ENSGALG00010009659) DDX47 (ENSGALG00010009672) Neognathae_b ANCESTRAL SPECIES 83 ENSGT00940000153118.db.a.b.d ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.a #28 ENSGT01100000263559.B #22 ENSGT00940000161385.m.a.b Neognathae_c ANCESTRAL SPECIES 106 ENSGT01100000263559.B #22 ENSGT01100000263567.a.b #27 ENSGT01100000263474.a.b.b.j.b.b.a #28 Golden eagle MODERN SPECIES 18 ENSACCG00020014337 #21 ENSACCG00020014302 #21 ENSACCG00020014283 ENSACCG00020014268 ENSACCG00020014257 ENSACCG00020014244 #21 ENSACCG00020014230 #18 ENSACCG00020014214 ENSACCG00020014202 #28 ENSACCG00020014188 ENSACCG00020014175 #28 ENSACCG00020014165 #28 ENSACCG00020014159 #18 ENSACCG00020014147 ENSACCG00020014141 #28 ENSACCG00020014131 #22 ENSACCG00020014121 #27 ENSACCG00020014109 #28 ENSACCG00020014102 ENSACCG00020014095 #18 APOLD1 (ENSACCG00020014085) DDX47 (ENSACCG00020014067) ENSACCG00020014060 HEBP1 (ENSACCG00020014050) ENSACCG00020014036 FAM234B (ENSACCG00020014012) GSG1 (ENSACCG00020013993) EMP1 (ENSACCG00020013982) GRIN2B (ENSACCG00020013961) ATF7IP (ENSACCG00020013900) PLBD1 (ENSACCG00020013881) Passeriformes ANCESTRAL SPECIES 221 ENSGT01100000263559.B #22 ENSGT00940000161385.m.a.b Passeriformes_d ANCESTRAL SPECIES 225 ENSGT01100000263559.B #22 ENSGT00940000161385.m.a.b Flycatcher MODERN SPECIES 10 ENSFALG00000024028 ENSFALG00000024477 ENSFALG00000025542 ENSFALG00000026328 ENSFALG00000027986 #18 ENSFALG00000028565 ENSFALG00000025898 ENSFALG00000015030 ENSFALG00000028498 #28 ENSFALG00000014910 #21 ENSFALG00000026855 #19 ENSFALG00000024259 ENSFALG00000024410 ENSFALG00000024851 ENSFALG00000025608 ENSFALG00000025838 #22 ENSFALG00000011368 #18 ENSFALG00000027151 APOLD1 (ENSFALG00000015142) DDX47 (ENSFALG00000011391) ENSFALG00000011403 HEBP1 (ENSFALG00000028562) ENSFALG00000024132 FAM234B (ENSFALG00000011447) GSG1 (ENSFALG00000024709) EMP1 (ENSFALG00000011466) GRIN2B (ENSFALG00000011468) ENSFALG00000026886 ATF7IP (ENSFALG00000011483) PLBD1 (ENSFALG00000011495) GUCY2C (ENSFALG00000011542) Passeriformes_g ANCESTRAL SPECIES 70 ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.b.a.b #28 ENSGT00950000183089.s.a.b #18 ENSGT00940000153118.db.a.a.a.f ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.a #28 ENSGT01100000263514.A.f.v ENSGT01100000263504.a.b.b.b.b.ub ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.b.a.a #28 ENSGT00940000153118.db.a.a.b.a.a.a.b ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263514.A.f.u.a.a ENSGT01100000263474.a.b.b.j.a.a.b #28 ENSGT01100000263514.A.f.u.b Passeroidea ANCESTRAL SPECIES 81 ENSGT00940000153118.db.a.b.d ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.a #28 ENSGT01100000263514.A.f.v ENSGT01100000263504.a.b.b.b.b.ub ENSGT01100000263474.a.b.b.j.b.b.b.b.b.a.a.a.b.a.a #28 ENSGT00940000153118.db.a.a.b.a.a.a.b ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263514.A.f.u.a.a ENSGT01100000263474.a.b.b.j.a.a.b #28 ENSGT01100000263514.A.f.u.b Common canary MODERN SPECIES 6 ENSSCAG00000006409 ENSSCAG00000006411 ENSSCAG00000006418 #28 ENSSCAG00000006421 ENSSCAG00000006423 #28 ENSSCAG00000006427 ENSSCAG00000006440 ENSSCAG00000006442 #19 ENSSCAG00000006445 #21 ENSSCAG00000006448 ENSSCAG00000006451 ENSSCAG00000006453 #28 ENSSCAG00000006454 ENSSCAG00000006459 #21 ENSSCAG00000006460 ENSSCAG00000006463 #22 ENSSCAG00000006467 #21 ENSSCAG00000006472 ENSSCAG00000006475 #28 ENSSCAG00000006478 ##22 ENSSCAG00000006480 ENSSCAG00000006483 #28 ENSSCAG00000006487 #21 ENSSCAG00000006488 #28 ENSSCAG00000006490 ENSSCAG00000006495 SMCO3 (ENSSCAG00000006501) ART4 (ENSSCAG00000006506) ENSSCAG00000006509 MGP (ENSSCAG00000006513) ERP27 (ENSSCAG00000006517) Zebra finch MODERN SPECIES 11 ENSTGUG00000023259 #28 ENSTGUG00000025906 ENSTGUG00000018918 ENSTGUG00000025029 #21 ENSTGUG00000021685 ENSTGUG00000009332 #18 ENSTGUG00000027107 ENSTGUG00000024300 ENSTGUG00000026411 ENSTGUG00000029262 ##22 ENSTGUG00000024041 #21 ENSTGUG00000023762 ENSTGUG00000024227 #28 ENSTGUG00000024417 ENSTGUG00000026778 #28 ENSTGUG00000025908 #22 ENSTGUG00000028919 ENSTGUG00000022164 ENSTGUG00000021922 ENSTGUG00000027005 DDX47 (ENSTGUG00000009385) ENSTGUG00000009414 HEBP1 (ENSTGUG00000022626) ENSTGUG00000022523 FAM234B (ENSTGUG00000009424) GSG1 (ENSTGUG00000009437) EMP1 (ENSTGUG00000026511) GRIN2B (ENSTGUG00000009456) ATF7IP (ENSTGUG00000009479) PLBD1 (ENSTGUG00000009494) GUCY2C (ENSTGUG00000009506) Cryptodira ANCESTRAL SPECIES 131 ENSGT01100000263504.a.b.b.b.a.b ENSGT00940000155501.b.i ENSGT00940000160426 ENSGT01100000263474.a.b.b.j.a.a.a.b #28 ENSGT01100000263559.B #22 ENSGT01100000263506.a Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 1257 ENSPSIG00000001626 ENSPSIG00000001616 ##22 H4C4 (ENSPSIG00000001606) #21 ENSPSIG00000001592 #21 ENSPSIG00000001580 #21 ENSPSIG00000001543 #21 ENSPSIG00000001532 #18 ENSPSIG00000003758 #28 ENSPSIG00000001516 ENSPSIG00000001507 ENSPSIG00000001495 ENSPSIG00000001472 #28 ENSPSIG00000001455 ENSPSIG00000001422 #21 ENSPSIG00000003754 ##22 ENSPSIG00000001382 #22 ENSPSIG00000003742 #28 ENSPSIG00000001368 ENSPSIG00000001405 ENSPSIG00000003689 ENSPSIG00000003674 SMCO3 (ENSPSIG00000001390) ENSPSIG00000001381 ART4 (ENSPSIG00000003662) MGP (ENSPSIG00000003615) ERP27 (ENSPSIG00000003609) ARHGDIB (ENSPSIG00000016539) PDE6H (ENSPSIG00000016325) AGBL3 (ENSPSIG00000015627) TMEM140 (ENSPSIG00000015467) WDR91 (ENSPSIG00000014113) Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 1257 ENSPSIG00000001455 ENSPSIG00000001472 #28 ENSPSIG00000001495 ENSPSIG00000001507 ENSPSIG00000001516 ENSPSIG00000003758 #28 ENSPSIG00000001532 #18 ENSPSIG00000001543 #21 ENSPSIG00000001580 #21 ENSPSIG00000001592 #21 H4C4 (ENSPSIG00000001606) #21 ENSPSIG00000001616 ##22 ENSPSIG00000001626 ENSPSIG00000001644 #28 ENSPSIG00000001655 #28 ENSPSIG00000001671 #22 ENSPSIG00000001694 #22 Chinese turtle MODERN SPECIES 1257 ENSPSIG00000001472 #28 ENSPSIG00000001495 ENSPSIG00000001507 ENSPSIG00000001516 ENSPSIG00000003758 #28 ENSPSIG00000001532 #18 ENSPSIG00000001543 #21 ENSPSIG00000001580 #21 ENSPSIG00000001592 #21 H4C4 (ENSPSIG00000001606) #21 ENSPSIG00000001616 ##22 ENSPSIG00000001626 ENSPSIG00000001644 #28 ENSPSIG00000001655 #28 ENSPSIG00000001671 #22 ENSPSIG00000001694 #22 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C ENSGT00390000006233.c.a.b ENSGT00930000151058 ENSGT00390000003753.b ENSGT00530000066362 ENSGT01030000234601.c.a.b ENSGT00940000171081 ENSGT00390000013440.e ENSGT01100000263840 ENSGT01070000253822.D.a.n.a ENSGT00940000153118.db.a.a.b.a.a.a.b.b ENSGT01100000263474.a.b.b.j.a.b.a.a #28 ENSGT01100000263559.B #22 ENSGT01100000263506.a ENSGT00940000153118.db.a.a.b.a.a.a.b.a.a ENSGT01100000263474.a.b.b.j.b.b.b.a.b #28 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.k #28 ENSGT00940000153092.a.a ENSGT01100000263559.A.f ##22 ENSGT01060000248528.b.jh.a.b #21 ENSGT01060000248528.b.jh.b #21 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.a.d #20 ENSGT00940000156302.fc ENSGT00940000155501.b.i.a.a ENSGT01100000263515.a.b.a.b.a.c ENSGT01030000234599.a.b Testudinidae ANCESTRAL SPECIES ENSGT00510000046732.A ENSGT00390000008610.a.a ENSGT00940000156163 ENSGT00940000159690 ENSGT00940000161093 ENSGT00530000063947.C ENSGT01030000234582.e.b ENSGT01030000234582.f.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT00530000063516.a.a ENSGT00390000009554 ENSGT00940000160984 ENSGT00940000153118.db.a.a.b.a.a.a.b.a.b.b ENSGT01100000263474.a.b.b.j.a.b.a.a #28 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263504.a.b.b.b.b ENSGT01100000263474.a.b.b.j.b.b.b.a.b #28 ENSGT01100000263504.a.b.b.b.a.a ENSGT01100000263474.a.b.b.k #28 ENSGT00940000153092.a.a ENSGT01100000263559.A.f ##22 ENSGT01060000248528.b.jh.a.b #21 ENSGT00730000110920.a ENSGT00940000156536 ENSGT00390000009497 ENSGT00940000155350 ENSGT00940000156251 ENSGT00950000182988.a.b.a.u ENSGT00530000063816.c Abingdon island giant tortoise MODERN SPECIES 1041 PDE6H (ENSCABG00000006859) ARHGDIB (ENSCABG00000006862) ERP27 (ENSCABG00000006864) MGP (ENSCABG00000006867) ART4 (ENSCABG00000006871) SMCO3 (ENSCABG00000006875) ENSCABG00000006876 ENSCABG00000006881 ENSCABG00000006882 ENSCABG00000006886 ENSCABG00000006896 ENSCABG00000006903 ENSCABG00000006907 #21 ENSCABG00000006909 ENSCABG00000006916 #28 ENSCABG00000006930 #22 ENSCABG00000006935 #21 ENSCABG00000006939 ENSCABG00000006948 #28 ENSCABG00000006973 #18 Emydidae ANCESTRAL SPECIES 163 ENSGT01100000263504.a.b.b.b.a.b ENSGT00940000155501.b.i.a.b ENSGT00940000160426 ENSGT01100000263474.a.b.b.j.a.a.a.b #28 ENSGT01100000263559.B #22 ENSGT00940000153118.db.a.a.b.a.a.a.b.b ENSGT01100000263474.a.b.b.j.a.b.a.a #28 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 28 ARHGDIB (ENSTMTG00000007864) ERP27 (ENSTMTG00000007875) ART4 (ENSTMTG00000007900) SMCO3 (ENSTMTG00000007909) ENSTMTG00000007917 ENSTMTG00000007937 ENSTMTG00000000055 ENSTMTG00000000081 ENSTMTG00000000091 #28 ENSTMTG00000000146 #21 ENSTMTG00000000153 ##22 ENSTMTG00000000169 ##22 ENSTMTG00000000178 #21 ENSTMTG00000000207 ENSTMTG00000000214 #28 ENSTMTG00000000222 #22 ENSTMTG00000000228 ENSTMTG00000000236 #28 ENSTMTG00000000247 #21 ENSTMTG00000000270 ##22 ENSTMTG00000000281 ENSTMTG00000000293 #21 ENSTMTG00000000303 ENSTMTG00000000311 ENSTMTG00000000321 #21 ENSTMTG00000000337 #21 ENSTMTG00000000347 H2AC7 (ENSTMTG00000000360) ENSTMTG00000000374 #28 ENSTMTG00000000387 ENSTMTG00000000420 Three-toed box turtle MODERN SPECIES 28 ENSTMTG00000000236 #28 ENSTMTG00000000247 #21 ENSTMTG00000000270 ##22 ENSTMTG00000000281 ENSTMTG00000000293 #21 ENSTMTG00000000303 ENSTMTG00000000311 ENSTMTG00000000321 #21 ENSTMTG00000000337 #21 ENSTMTG00000000347 H2AC7 (ENSTMTG00000000360) ENSTMTG00000000374 #28 ENSTMTG00000000387 ENSTMTG00000000420 ENSTMTG00000000438 #28 ENSTMTG00000000446 #22 ENSTMTG00000000461 ENSTMTG00000000472 ENSTMTG00000000484 ##22 ENSTMTG00000000494 #28 ENSTMTG00000000502 APOLD1 (ENSTMTG00000000521) DDX47 (ENSTMTG00000000534) ENSTMTG00000000551 HEBP1 (ENSTMTG00000000561) FAM234B (ENSTMTG00000000579) GSG1 (ENSTMTG00000000615) EMP1 (ENSTMTG00000000648) GRIN2B (ENSTMTG00000000660) ATF7IP (ENSTMTG00000000701) PLBD1 (ENSTMTG00000000759) Anura ANCESTRAL SPECIES 306 ENSGT01100000263559.A.d ##22 ENSGT01100000263559.B #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b #28 ENSGT00940000153118 ENSGT00950000183089 #18 ENSGT01060000248528.b.jh.b #21 ENSGT01100000263567.a.b #27 Frog DUPLICATION Frog MODERN SPECIES 3 dsn1 (ENSXETG00000026399) fbxl12 (ENSXETG00000000645) clec4m (ENSXETG00000000646) clec4e (ENSXETG00000000644) ENSXETG00000041630 lmx1b.2 (ENSXETG00000000641) chchd5 (ENSXETG00000042136) atp13a1 (ENSXETG00000000635) ENSXETG00000043627 #21 ENSXETG00000048856 ENSXETG00000045293 #21 ENSXETG00000047630 #18 ENSXETG00000048747 #21 ENSXETG00000045405 h3c14 (ENSXETG00000044910) #22 h3c14 (ENSXETG00000044354) #22 ENSXETG00000048482 #28 ENSXETG00000045042 #18 ENSXETG00000046881 #27 ENSXETG00000044704 #21 ENSXETG00000048427 ENSXETG00000043134 #18 ENSXETG00000046040 #21 h2ac12 (ENSXETG00000048231) h3c14 (ENSXETG00000044611) #22 h3c14 (ENSXETG00000044528) ##22 ENSXETG00000034713 ENSXETG00000043592 #18 ENSXETG00000049375 h3c14 (ENSXETG00000046975) ##22 ENSXETG00000048994 Frog MODERN SPECIES 6 ENSXETG00000047743 ENSXETG00000039086 MGC145518 (ENSXETG00000032392) ENSXETG00000047285 ENSXETG00000035631 ENSXETG00000030081 ENSXETG00000024374 ENSXETG00000044061 ENSXETG00000043716 znf568 (ENSXETG00000024362) ENSXETG00000042392 ENSXETG00000042865 #25 ENSXETG00000030307 ENSXETG00000046344 ENSXETG00000046312 h3c14 (ENSXETG00000045663) #22 ENSXETG00000047120 #19 ENSXETG00000045443 #28 ENSXETG00000046535 #21 ENSXETG00000035834 ENSXETG00000049148 #21 ENSXETG00000045159 ENSXETG00000043919 ENSXETG00000044932 ENSXETG00000037756 ENSXETG00000044695 XB5896327 [provisional:trim25] (ENSXETG00000031315) ENSXETG00000003407 ENSXETG00000042609 ENSXETG00000018403 ENSXETG00000037506 Frog MODERN SPECIES 9 ENSXETG00000048548 tnfrsf12a (ENSXETG00000048784) b2m (ENSXETG00000033246) trim72 (ENSXETG00000034870) ENSXETG00000038188 ENSXETG00000040750 ENSXETG00000044796 ENSXETG00000043427 #28 ENSXETG00000038302 #18 h3c14 (ENSXETG00000042734) ##22 ENSXETG00000044502 #21 ENSXETG00000034552 ENSXETG00000042925 ENSXETG00000049291 #18 h2ac21 (ENSXETG00000044100) h3c14 (ENSXETG00000044526) #22 ENSXETG00000046306 #21 pycard (ENSXETG00000036975) ENSXETG00000038422 ENSXETG00000034437 ENSXETG00000038074 ENSXETG00000043862 bcl7c (ENSXETG00000036060) ENSXETG00000036989 ZNF646 (ENSXETG00000036016) znf668 (ENSXETG00000038510) stx4 (ENSXETG00000048105) stx1b (ENSXETG00000030140) hsd3b7 (ENSXETG00000001913) setd1a (ENSXETG00000001921) fbxl19 (ENSXETG00000037049) Frog DUPLICATION Frog MODERN SPECIES 9 ENSXETG00000043472 #27 ENSXETG00000039538 ENSXETG00000042002 ENSXETG00000033833 #18 ENSXETG00000044553 znf585a (ENSXETG00000045538) XB5772961 [provisional] (ENSXETG00000038026) ENSXETG00000040589 ENSXETG00000047810 ENSXETG00000041825 #28 ENSXETG00000036199 #28 ENSXETG00000043294 #27 ENSXETG00000042757 ENSXETG00000042082 #28 ENSXETG00000041789 h3c14 (ENSXETG00000045858) #22 ENSXETG00000045984 #21 ENSXETG00000048291 #28 ENSXETG00000006489 ENSXETG00000043404 ENSXETG00000041488 #27 ENSXETG00000045744 #21 ENSXETG00000046804 #28 ENSXETG00000044756 #18 ENSXETG00000038981 #18 ENSXETG00000043458 ENSXETG00000042653 ENSXETG00000045527 ENSXETG00000037055 ENSXETG00000043446 ENSXETG00000038638 Frog MODERN SPECIES 3 h3c14 (ENSXETG00000046975) ##22 ENSXETG00000049375 ENSXETG00000043592 #18 ENSXETG00000034713 h3c14 (ENSXETG00000044528) ##22 h3c14 (ENSXETG00000044611) #22 h2ac12 (ENSXETG00000048231) ENSXETG00000046040 #21 ENSXETG00000043134 #18 ENSXETG00000048427 ENSXETG00000044704 #21 ENSXETG00000046881 #27 ENSXETG00000045042 #18 ENSXETG00000048482 #28 h3c14 (ENSXETG00000044354) #22 h3c14 (ENSXETG00000044910) #22 ENSXETG00000045405 ENSXETG00000048747 #21 ENSXETG00000047630 #18 ENSXETG00000045293 #21 ENSXETG00000048856 ENSXETG00000043627 #21 atp13a1 (ENSXETG00000000635) chchd5 (ENSXETG00000042136) lmx1b.2 (ENSXETG00000000641) ENSXETG00000041630 clec4e (ENSXETG00000000644) clec4m (ENSXETG00000000646) fbxl12 (ENSXETG00000000645) dsn1 (ENSXETG00000026399) ENSXETG00000047317 Frog MODERN SPECIES 9 ENSXETG00000049087 ENSXETG00000046935 h3c14 (ENSXETG00000048174) ##22 ENSXETG00000043641 ENSXETG00000049129 #28 ENSXETG00000047959 ENSXETG00000038839 h2ac21 (ENSXETG00000043529) ENSXETG00000049253 ENSXETG00000024252 #18 ENSXETG00000043274 ENSXETG00000042414 ENSXETG00000048370 h2ac21 (ENSXETG00000048013) ENSXETG00000047553 #18 h3c14 (ENSXETG00000044638) #22 ENSXETG00000046168 #21 h2ac21 (ENSXETG00000044601) h2bc21 (ENSXETG00000043429) #28 XB5836359 [provisional:trim25] (ENSXETG00000045507) ENSXETG00000044900 ENSXETG00000040161 ENSXETG00000047256 ENSXETG00000043833 zg16 (ENSXETG00000012436) doc2a (ENSXETG00000044702) ino80e (ENSXETG00000033211) hirip3 (ENSXETG00000031738) dusp14 (ENSXETG00000040580) dppa2 (ENSXETG00000032148) sez6l2 (ENSXETG00000011339) Frog MODERN SPECIES 3 h3c14 (ENSXETG00000041525) ##22 ENSXETG00000040201 ENSXETG00000043306 #21 ENSXETG00000048561 #28 ENSXETG00000042408 ENSXETG00000042790 ENSXETG00000045640 #18 h3c14 (ENSXETG00000042473) ##22 h2bc11 (ENSXETG00000039549) #28 ENSXETG00000048994 h3c14 (ENSXETG00000046975) ##22 ENSXETG00000049375 ENSXETG00000043592 #18 ENSXETG00000034713 h3c14 (ENSXETG00000044528) ##22 h3c14 (ENSXETG00000044611) #22 h2ac12 (ENSXETG00000048231) ENSXETG00000046040 #21 ENSXETG00000043134 #18 ENSXETG00000048427 ENSXETG00000044704 #21 ENSXETG00000046881 #27 ENSXETG00000045042 #18 ENSXETG00000048482 #28 h3c14 (ENSXETG00000044354) #22 h3c14 (ENSXETG00000044910) #22 ENSXETG00000045405 ENSXETG00000048747 #21 ENSXETG00000047630 #18 ENSXETG00000045293 #21 ENSXETG00000048856 Frog MODERN SPECIES 6 ENSXETG00000044932 ENSXETG00000037756 ENSXETG00000044695 XB5896327 [provisional:trim25] (ENSXETG00000031315) ENSXETG00000003407 ENSXETG00000042609 ENSXETG00000018403 ENSXETG00000037506 ENSXETG00000047410 #21 ENSXETG00000045929 #28 ENSXETG00000047380 #21 h3c14 (ENSXETG00000043383) #22 ENSXETG00000041056 #18 h3c14 (ENSXETG00000041419) ##22 ENSXETG00000045612 #28 h3c14 (ENSXETG00000046180) #22 ENSXETG00000048401 #21 ENSXETG00000042804 #25 ENSXETG00000045736 #28 ENSXETG00000049063 #21 ENSXETG00000046114 ENSXETG00000043740 #28 ENSXETG00000037819 ENSXETG00000045718 ENSXETG00000042142 ENSXETG00000040222 ENSXETG00000039120 ENSXETG00000046964 ENSXETG00000048915 ENSXETG00000042187 ENSXETG00000041465 Frog MODERN SPECIES 6 ENSXETG00000039120 ENSXETG00000040222 ENSXETG00000042142 ENSXETG00000045718 ENSXETG00000037819 ENSXETG00000043740 #28 ENSXETG00000046114 ENSXETG00000049063 #21 ENSXETG00000045736 #28 ENSXETG00000042804 #25 ENSXETG00000048401 #21 h3c14 (ENSXETG00000046180) #22 ENSXETG00000045612 #28 h3c14 (ENSXETG00000041419) ##22 ENSXETG00000041056 #18 h3c14 (ENSXETG00000043383) #22 ENSXETG00000047380 #21 ENSXETG00000045929 #28 ENSXETG00000047410 #21 ENSXETG00000037506 ENSXETG00000018403 ENSXETG00000042609 ENSXETG00000003407 XB5896327 [provisional:trim25] (ENSXETG00000031315) ENSXETG00000044695 ENSXETG00000037756 ENSXETG00000044932 ENSXETG00000043919 ENSXETG00000045159 ENSXETG00000049148 #21 ENSXETG00000035834 Frog MODERN SPECIES 9 ENSXETG00000042049 ENSXETG00000045956 ENSXETG00000036839 ENSXETG00000042733 ENSXETG00000043974 ENSXETG00000035804 ENSXETG00000034508 ENSXETG00000044854 ENSXETG00000041669 ENSXETG00000047998 ENSXETG00000042771 ENSXETG00000048301 ENSXETG00000046250 #28 ENSXETG00000048504 #21 ENSXETG00000027962 #18 h3c14 (ENSXETG00000045967) #22 ENSXETG00000033789 XB5924310 (ENSXETG00000007273) ENSXETG00000042965 ENSXETG00000048859 ENSXETG00000038680 ENSXETG00000036338 ENSXETG00000027332 ENSXETG00000047417 ENSXETG00000045026 ENSXETG00000041463 ENSXETG00000046333 ENSXETG00000024253 ENSXETG00000046276 ENSXETG00000024242 ENSXETG00000041796 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 838 ENSLLEG00000016304 #22 ENSLLEG00000016284 #21 ENSLLEG00000016240 ENSLLEG00000016214 ENSLLEG00000016166 #18 ENSLLEG00000016139 #22 ENSLLEG00000016114 #18 Leishan spiny toad MODERN SPECIES 218 ENSLLEG00000010442 #28 ENSLLEG00000010422 ENSLLEG00000010394 #18 ENSLLEG00000010373 #22 ENSLLEG00000010363 #21 Leishan spiny toad MODERN SPECIES 219 ENSLLEG00000010632 #28 ENSLLEG00000010599 ENSLLEG00000010561 #18 ENSLLEG00000010540 #22 ENSLLEG00000010517 #21 ENSLLEG00000010490 ENSLLEG00000010471 #18 ENSLLEG00000010454 #18 Leishan spiny toad MODERN SPECIES 1479 ENSLLEG00000027160 #28 ENSLLEG00000027174 ENSLLEG00000027192 H3C13 (ENSLLEG00000027207) #22 ENSLLEG00000027230 #21 ENSLLEG00000027245 #18 ENSLLEG00000027286 ENSLLEG00000027306 #28 ENSLLEG00000027323 ENSLLEG00000027338 #20 ENSLLEG00000027358 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000019967 #28 ENSLLEG00000019929 ENSLLEG00000019912 #21 ENSLLEG00000019882 #28 ENSLLEG00000019859 ENSLLEG00000019843 #21 ENSLLEG00000019784 ENSLLEG00000019760 ENSLLEG00000019741 #28 ENSLLEG00000019709 ENSLLEG00000019682 ENSLLEG00000019646 #28 ENSLLEG00000019620 #21 ENSLLEG00000019604 #28 ENSLLEG00000019588 ENSLLEG00000019566 #22 ENSLLEG00000019518 ENSLLEG00000019463 #18 ENSLLEG00000019403 ENSLLEG00000019382 #28 ENSLLEG00000019359 ENSLLEG00000019340 #22 ENSLLEG00000019314 #28 ENSLLEG00000019295 ENSLLEG00000019283 #21 CYB561 (ENSLLEG00000019175) ENSLLEG00000019139 TANC2 (ENSLLEG00000017648) ENSLLEG00000017194 MRC2 (ENSLLEG00000015994) TLK2 (ENSLLEG00000014977) Leishan spiny toad MODERN SPECIES 628 ENSLLEG00000027021 #28 ENSLLEG00000027038 #22 ENSLLEG00000027051 #21 ENSLLEG00000027065 #18 Leishan spiny toad MODERN SPECIES 838 ENSLLEG00000016304 #22 ENSLLEG00000016284 #21 ENSLLEG00000016240 ENSLLEG00000016214 ENSLLEG00000016166 #18 ENSLLEG00000016139 #22 ENSLLEG00000016114 #18 Leishan spiny toad MODERN SPECIES 3 DNTTIP1 (ENSLLEG00000030632) ENSLLEG00000030644 ENSLLEG00000014358 ITGB3 (ENSLLEG00000014416) ENSLLEG00000014646 ENSLLEG00000014904 TLK2 (ENSLLEG00000014977) MRC2 (ENSLLEG00000015994) ENSLLEG00000017194 TANC2 (ENSLLEG00000017648) ENSLLEG00000019139 CYB561 (ENSLLEG00000019175) ENSLLEG00000019283 #21 ENSLLEG00000019295 ENSLLEG00000019314 #28 ENSLLEG00000019340 #22 ENSLLEG00000019359 ENSLLEG00000019382 #28 ENSLLEG00000019403 ENSLLEG00000019463 #18 ENSLLEG00000019518 ENSLLEG00000019566 #22 ENSLLEG00000019588 ENSLLEG00000019604 #28 ENSLLEG00000019620 #21 ENSLLEG00000019646 #28 ENSLLEG00000019682 ENSLLEG00000019709 ENSLLEG00000019741 #28 ENSLLEG00000019760 ENSLLEG00000019784