Mammalia ANCESTRAL SPECIES 123 ENSGT01100000263559.A.e.a ##22 ENSGT01060000248528.b.jh.a.a.b ##21 ENSGT01100000263474.a.b.a.d ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263504.a.b.b.b.b ENSGT00940000153092.a.b ENSGT00940000153125.D ENSGT01100000263506.a.e.a ##23 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b ENSGT00940000153092.a.a ENSGT01100000263559.A.f #22 ENSGT00940000153118.db.b Theria ANCESTRAL SPECIES 69 ENSGT01100000263559.A.e.a ##22 ENSGT01060000248528.b.jh.a.a.b ##21 ENSGT01100000263474.a.b.a.d ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263504.a.b.b.b.b ENSGT00940000160426 ENSGT01100000263575.A ENSGT00940000153125.D ENSGT01100000263506.a.e.a ##23 ENSGT01060000248528.b.kh #21 ENSGT01100000263474.a.b.b ENSGT00940000153092.a.a ENSGT01100000263559.A.f #22 ENSGT01100000263575.B ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 Eutheria ANCESTRAL SPECIES 53 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.b ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b Boreoeutheria ANCESTRAL SPECIES ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT01100000263567.a.a ENSGT01100000263506.a.e.a.a.a.b.b.a.a.a ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000153125.D.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b ENSGT01100000263514.A.e.a.a ENSGT00940000155501.a.b ENSGT00990000203553.c.b ENSGT01060000248528.b.kh.xb.b.a ##21 ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000153118.db.a.b ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.f.b ##23 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Glires ANCESTRAL SPECIES ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Rodentia ANCESTRAL SPECIES 6 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.a ENSGT01030000234553.b.b.c.b.b.c ENSGT00390000002062 ENSGT00950000182802.B.a.a.b ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000162723 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e #22 ENSGT00940000153118.db.b ENSGT01060000248528.b.jh.a.a.a ##21 ENSGT01060000248528.b.kh.xb.b.a ##21 ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.f.b ##23 ENSGT01060000248528.b.kh.xb.b.b ##21 ENSGT01100000263506.a.e.a.a.b.a ##23 ENSGT01100000263474.a.b.a.d ENSGT01060000248528.b.jh.b ##21 ENSGT00940000155501.a.b ENSGT01100000263514.A.f Rodentia_B ANCESTRAL SPECIES ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 #18 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00910000145379.c ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Myomorpha ANCESTRAL SPECIES 12 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 #18 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Muroidea ANCESTRAL SPECIES 15 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.f.b ##23 ENSGT01060000248528.b.jh.a.a.a ##21 ENSGT01060000248528.b.kh.xb.b.a ##21 ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e #22 ENSGT00940000160426 ENSGT01100000263559.B #20 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ##23 ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000160281 ENSGT00940000153253.b.a.h ENSGT00940000164849 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a.u #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT00940000165934 #31 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Murinae ANCESTRAL SPECIES 5 ENSGT00950000182907.a.a.u #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 #18 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263559.B #20 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT00940000165934 #31 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Rat DUPLICATION Rat MODERN SPECIES 11 Aph1a (ENSRNOG00000023816) #7 Car14 (ENSRNOG00000023162) #8 Anp32e (ENSRNOG00000021168) #9 RGD1562196 (ENSRNOG00000065202) #10 Plekho1 (ENSRNOG00000021170) #11 Vps45 (ENSRNOG00000021173) #12 Otud7b (ENSRNOG00000042068) #13 Mtmr11 (ENSRNOG00000021176) #14 Sf3b4 (ENSRNOG00000021181) #15 Sv2a (ENSRNOG00000021182) #16 Bola1 (ENSRNOG00000021185) #17 ENSRNOG00000062927 #18 LOC102549173 (ENSRNOG00000068046) #19 LOC102549173 (ENSRNOG00000065886) #20 Hist1h4b (ENSRNOG00000032224) #21 Hist2h3c2 (ENSRNOG00000063016) #22 H2bc18 (ENSRNOG00000070591) #23 Fcgr1a (ENSRNOG00000021199) #24 ENSRNOG00000069676 #25 AABR07012587.1 (ENSRNOG00000002223) #26 AABR07012588.1 (ENSRNOG00000059842) #27 Hjv (ENSRNOG00000021200) #28 AABR07012592.1 (ENSRNOG00000037223) #29 Txnip (ENSRNOG00000021201) #30 Polr3gl (ENSRNOG00000021209) #31 ENSRNOG00000069895 #32 Ankrd34a (ENSRNOG00000033741) #33 Lix1l (ENSRNOG00000021213) #34 Rbm8a (ENSRNOG00000021215) #35 Pex11b (ENSRNOG00000021216) #36 Itga10 (ENSRNOG00000021217) #37 Rat MODERN SPECIES 8 Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 ENSRNOG00000064118 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) ##21 LOC102549173 (ENSRNOG00000066835) ##22 H3c13 (ENSRNOG00000065054) ##22 Hist1h2af (ENSRNOG00000022146) H1f2 (ENSRNOG00000067441) Hfe (ENSRNOG00000016967) Hist1h4m (ENSRNOG00000070706) ##21 H1f6 (ENSRNOG00000061863) Hist1h2bq (ENSRNOG00000069578) ##23 AC130391.3 (ENSRNOG00000053025) H1f4 (ENSRNOG00000047459) Hist1h4m (ENSRNOG00000070513) ##21 H4f3 (ENSRNOG00000048264) hist1h2ail2 (ENSRNOG00000067434) LOC102548682 (ENSRNOG00000064521) ##22 LOC100910200 (ENSRNOG00000064011) ##23 Hist1h3b (ENSRNOG00000068516) Rat MODERN SPECIES 11 Lix1l (ENSRNOG00000021213) #34 Ankrd34a (ENSRNOG00000033741) #33 ENSRNOG00000069895 #32 Polr3gl (ENSRNOG00000021209) #31 Txnip (ENSRNOG00000021201) #30 AABR07012592.1 (ENSRNOG00000037223) #29 Hjv (ENSRNOG00000021200) #28 AABR07012588.1 (ENSRNOG00000059842) #27 AABR07012587.1 (ENSRNOG00000002223) #26 ENSRNOG00000069676 #25 Fcgr1a (ENSRNOG00000021199) #24 H2bc18 (ENSRNOG00000070591) #23 Hist2h3c2 (ENSRNOG00000063016) #22 Hist1h4b (ENSRNOG00000032224) #21 LOC102549173 (ENSRNOG00000065886) #20 LOC102549173 (ENSRNOG00000068046) #19 ENSRNOG00000062927 #18 Bola1 (ENSRNOG00000021185) #17 Sv2a (ENSRNOG00000021182) #16 Sf3b4 (ENSRNOG00000021181) #15 Mtmr11 (ENSRNOG00000021176) #14 Otud7b (ENSRNOG00000042068) #13 Vps45 (ENSRNOG00000021173) #12 Plekho1 (ENSRNOG00000021170) #11 RGD1562196 (ENSRNOG00000065202) #10 Anp32e (ENSRNOG00000021168) #9 Car14 (ENSRNOG00000023162) #8 Aph1a (ENSRNOG00000023816) #7 C2H1orf54 (ENSRNOG00000059750) Ciart (ENSRNOG00000042717) Mrps21 (ENSRNOG00000024845) Mus ANCESTRAL SPECIES 7 ENSGT00950000182907.a.a.u #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 #18 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263559.B #20 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT00860000135842 ENSGT00940000165934 #31 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423.c #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Shrew mouse MODERN SPECIES 17 Car14 (MGP_PahariEiJ_G0026803) #8 MGP_PahariEiJ_G0026804 #9 Plekho1 (MGP_PahariEiJ_G0026805) #11 Vps45 (MGP_PahariEiJ_G0026806) #12 Otud7b (MGP_PahariEiJ_G0026807) #13 Mtmr11 (MGP_PahariEiJ_G0026808) #14 Sf3b4 (MGP_PahariEiJ_G0026809) #15 Sv2a (MGP_PahariEiJ_G0026810) #16 Bola1 (MGP_PahariEiJ_G0026811) #17 H2ac21 (MGP_PahariEiJ_G0026812) H2ac20 (MGP_PahariEiJ_G0026813) MGP_PahariEiJ_G0026815 MGP_PahariEiJ_G0026814 H2bc21 (MGP_PahariEiJ_G0026816) ##23 MGP_PahariEiJ_G0026817 ##21 MGP_PahariEiJ_G0026818 #22 MGP_PahariEiJ_G0026819 #20 H2bc18 (MGP_PahariEiJ_G0026820) #23 Fcgr1 (MGP_PahariEiJ_G0026821) #24 Hjv (MGP_PahariEiJ_G0026822) #28 Txnip (MGP_PahariEiJ_G0026823) #30 MGP_PahariEiJ_G0026824 Polr3gl (MGP_PahariEiJ_G0026825) #31 Ankrd34a (MGP_PahariEiJ_G0026826) #33 Lix1l (MGP_PahariEiJ_G0026827) #34 MGP_PahariEiJ_G0026828 #35 Pex11b (MGP_PahariEiJ_G0026829) #36 MGP_PahariEiJ_G0026830 #37 Itga10 (MGP_PahariEiJ_G0026831) #37 Ankrd35 (MGP_PahariEiJ_G0026832) Pias3 (MGP_PahariEiJ_G0026833) Mus_A ANCESTRAL SPECIES 9 ENSGT00950000182907.a.a.u #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153092.a.a.d.f.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT00940000156302 #18 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT00860000135842 ENSGT00940000165934 #31 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185.n.a #35 ENSGT00390000014273.b #36 ENSGT00940000158423.c #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Ryukyu mouse MODERN SPECIES 12 Car14 (MGP_CAROLIEiJ_G0025359) #8 Anp32e (MGP_CAROLIEiJ_G0025360) #9 Plekho1 (MGP_CAROLIEiJ_G0025361) #11 Vps45 (MGP_CAROLIEiJ_G0025362) #12 Otud7b (MGP_CAROLIEiJ_G0025363) #13 Mtmr11 (MGP_CAROLIEiJ_G0025364) #14 Sf3b4 (MGP_CAROLIEiJ_G0025365) #15 Sv2a (MGP_CAROLIEiJ_G0025366) #16 Bola1 (MGP_CAROLIEiJ_G0025367) #17 H2ac21 (MGP_CAROLIEiJ_G0025368) H2ac20 (MGP_CAROLIEiJ_G0025369) MGP_CAROLIEiJ_G0025370 H2bc21 (MGP_CAROLIEiJ_G0025371) ##23 MGP_CAROLIEiJ_G0025372 #18 MGP_CAROLIEiJ_G0025373 ##21 MGP_CAROLIEiJ_G0025374 #22 H2bc18 (MGP_CAROLIEiJ_G0025375) #23 Fcgr1 (MGP_CAROLIEiJ_G0025376) #24 Hjv (MGP_CAROLIEiJ_G0025377) #28 Txnip (MGP_CAROLIEiJ_G0025378) #30 MGP_CAROLIEiJ_G0025379 Polr3gl (MGP_CAROLIEiJ_G0025380) #31 Ankrd34a (MGP_CAROLIEiJ_G0025381) #33 Lix1l (MGP_CAROLIEiJ_G0025382) #34 Rbm8a (MGP_CAROLIEiJ_G0025383) #35 Pex11b (MGP_CAROLIEiJ_G0025384) #36 MGP_CAROLIEiJ_G0025385 #37 Itga10 (MGP_CAROLIEiJ_G0025386) #37 MGP_CAROLIEiJ_G0025387 Pias3 (MGP_CAROLIEiJ_G0025388) Nudt17 (MGP_CAROLIEiJ_G0025389) Mus_B ANCESTRAL SPECIES 13 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263506.a.f.b.p.a ##23 ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01060000248528.b.jh.a.b ##21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT00940000155501.a.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.b.c.b.a.a ENSGT01030000234553.b.b.c.b.a.a.b.a.a.a.a.b.a.a.b.b ENSGT01030000234553.b.b.c.b.a.a.b.a.a.a.a.a.b.b.a ENSGT01030000234553.b.b.c.b.b.c.b.a.b.b ENSGT01030000234553.b.b.c.b.b.c.a.a.b.a.b ENSGT01030000234553.b.b.c.b.b.c.b.b.b ENSGT01030000234553.b.b.c.b.a.a.b.a.a.b.b.a ENSGT01030000234553.b.b.c.b.a.a.b.a.a.b.a.b ENSGT01030000234553.b.b.c.b.a.a.b.a.a.b.a.a ENSGT01030000234553.b.b.c.b.a.b.d Mouse MODERN SPECIES 12 Pex11b (ENSMUSG00000028102) #36 Rbm8a (ENSMUSG00000038374) #35 Lix1l (ENSMUSG00000049288) #34 Ankrd34a (ENSMUSG00000049097) #33 Polr3gl (ENSMUSG00000028104) #31 Gm16253 (ENSMUSG00000087610) Txnip (ENSMUSG00000038393) #30 Hjv (ENSMUSG00000038403) #28 Fcgr1 (ENSMUSG00000015947) #24 H2bc18 (ENSMUSG00000105827) #23 H3c13 (ENSMUSG00000074403) ##22 H4c14 (ENSMUSG00000091405) ##21 H3c14 (ENSMUSG00000093769) ##22 H2ac18 (ENSMUSG00000064220) #18 H2ac19 (ENSMUSG00000063954) #18 H3c15 (ENSMUSG00000081058) #22 H2bc21 (ENSMUSG00000068854) ##23 H2ac20 (ENSMUSG00000068855) H2ac21 (ENSMUSG00000063689) Bola1 (ENSMUSG00000015943) #17 Sv2a (ENSMUSG00000038486) #16 Sf3b4 (ENSMUSG00000068856) #15 Mtmr11 (ENSMUSG00000045934) #14 Otud7b (ENSMUSG00000038495) #13 Vps45 (ENSMUSG00000015747) #12 Plekho1 (ENSMUSG00000015745) #11 Anp32e (ENSMUSG00000015749) #9 Car14 (ENSMUSG00000038526) #8 Aph1a (ENSMUSG00000015750) #7 BC028528 (ENSMUSG00000038543) Ciart (ENSMUSG00000038550) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263514.A.f ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000156302 #18 ENSGT00940000153092.a.a.d.e.a ENSGT01100000263559.B #20 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT01100000263506.a.e.a.a.a.b.b.a.a.a ##23 ENSGT01100000263506.a.f.b.p.b ##23 ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000155501.a.a ENSGT00940000155501.a.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.b.c.b.a.a spretus DUPLICATION spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019204 #21 MGP_SPRETEiJ_G0019203 #21 MGP_SPRETEiJ_G0019202 MGP_SPRETEiJ_G0019201 ##23 MGP_SPRETEiJ_G0019200 #22 H1f2 (MGP_SPRETEiJ_G0019199) Hfe (MGP_SPRETEiJ_G0019198) MGP_SPRETEiJ_G0019197 H1f6 (MGP_SPRETEiJ_G0019196) MGP_SPRETEiJ_G0019194 #21 MGP_SPRETEiJ_G0019193 #22 MGP_SPRETEiJ_G0019192 MGP_SPRETEiJ_G0019191 MGP_SPRETEiJ_G0019190 MGP_SPRETEiJ_G0019189 #20 MGP_SPRETEiJ_G0019188 #22 MGP_SPRETEiJ_G0019187 MGP_SPRETEiJ_G0019186 MGP_SPRETEiJ_G0019185 MGP_SPRETEiJ_G0019184 Btn2a2 (MGP_SPRETEiJ_G0019183) Btn1a1 (MGP_SPRETEiJ_G0019182) Abt1 (MGP_SPRETEiJ_G0019181) Zfp322a (MGP_SPRETEiJ_G0019180) MGP_SPRETEiJ_G0019179 Vmn1r217 (MGP_SPRETEiJ_G0019178) MGP_SPRETEiJ_G0019177 Vmn1r215 (MGP_SPRETEiJ_G0019176) Vmn1r214 (MGP_SPRETEiJ_G0019175) MGP_SPRETEiJ_G0019174 MGP_SPRETEiJ_G0019173 spretus DUPLICATION spretus MODERN SPECIES 4 Cmah (MGP_SPRETEiJ_G0019215) MGP_SPRETEiJ_G0019214 Carmil1 (MGP_SPRETEiJ_G0019213) Scgn (MGP_SPRETEiJ_G0019212) Slc17a4 (MGP_SPRETEiJ_G0019211) Slc17a1 (MGP_SPRETEiJ_G0019210) Slc17a3 (MGP_SPRETEiJ_G0019209) Slc17a2 (MGP_SPRETEiJ_G0019208) Trim38 (MGP_SPRETEiJ_G0019207) H1f1 (MGP_SPRETEiJ_G0019206) MGP_SPRETEiJ_G0019205 MGP_SPRETEiJ_G0019204 #21 MGP_SPRETEiJ_G0019203 #21 MGP_SPRETEiJ_G0019202 MGP_SPRETEiJ_G0019201 ##23 MGP_SPRETEiJ_G0019200 #22 H1f2 (MGP_SPRETEiJ_G0019199) Hfe (MGP_SPRETEiJ_G0019198) MGP_SPRETEiJ_G0019197 H1f6 (MGP_SPRETEiJ_G0019196) MGP_SPRETEiJ_G0019194 #21 MGP_SPRETEiJ_G0019193 #22 MGP_SPRETEiJ_G0019192 MGP_SPRETEiJ_G0019191 MGP_SPRETEiJ_G0019190 MGP_SPRETEiJ_G0019189 #20 MGP_SPRETEiJ_G0019188 #22 MGP_SPRETEiJ_G0019187 MGP_SPRETEiJ_G0019186 MGP_SPRETEiJ_G0019185 MGP_SPRETEiJ_G0019184 spretus MODERN SPECIES 4 Vmn1r217 (MGP_SPRETEiJ_G0019178) MGP_SPRETEiJ_G0019179 Zfp322a (MGP_SPRETEiJ_G0019180) Abt1 (MGP_SPRETEiJ_G0019181) Btn1a1 (MGP_SPRETEiJ_G0019182) Btn2a2 (MGP_SPRETEiJ_G0019183) MGP_SPRETEiJ_G0019184 MGP_SPRETEiJ_G0019185 MGP_SPRETEiJ_G0019186 MGP_SPRETEiJ_G0019187 MGP_SPRETEiJ_G0019188 #22 MGP_SPRETEiJ_G0019189 #20 MGP_SPRETEiJ_G0019190 MGP_SPRETEiJ_G0019191 MGP_SPRETEiJ_G0019192 MGP_SPRETEiJ_G0019193 #22 MGP_SPRETEiJ_G0019194 #21 H1f6 (MGP_SPRETEiJ_G0019196) MGP_SPRETEiJ_G0019197 Hfe (MGP_SPRETEiJ_G0019198) H1f2 (MGP_SPRETEiJ_G0019199) MGP_SPRETEiJ_G0019200 #22 MGP_SPRETEiJ_G0019201 ##23 MGP_SPRETEiJ_G0019202 MGP_SPRETEiJ_G0019203 #21 MGP_SPRETEiJ_G0019204 #21 MGP_SPRETEiJ_G0019205 H1f1 (MGP_SPRETEiJ_G0019206) Trim38 (MGP_SPRETEiJ_G0019207) Slc17a2 (MGP_SPRETEiJ_G0019208) Slc17a3 (MGP_SPRETEiJ_G0019209) Cricetidae ANCESTRAL SPECIES 48 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000162950 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.a ##23 ENSGT00940000153092.a.a.c.a.a.f.a Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00530000068834 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT01100000263474.a.a.c.a ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b.b ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000153092.a.a.c.a.a.g Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 19 Anp32e (ENSPEMG00000000742) ##9 Plekho1 (ENSPEMG00000015477) #11 Vps45 (ENSPEMG00000018774) #12 ENSPEMG00000030134 Otud7b (ENSPEMG00000027312) #13 Mtmr11 (ENSPEMG00000014402) #14 Sf3b4 (ENSPEMG00000017568) #15 Sv2a (ENSPEMG00000008887) #16 Bola1 (ENSPEMG00000008051) #17 H2ac21 (ENSPEMG00000025720) H2ac20 (ENSPEMG00000008763) H2bc21 (ENSPEMG00000026085) ##23 ENSPEMG00000026231 #20 ENSPEMG00000024811 #18 ENSPEMG00000030515 #21 ENSPEMG00000030275 #22 H2bc18 (ENSPEMG00000026346) #23 Fcgr1 (ENSPEMG00000010092) #24 ENSPEMG00000029146 Hjv (ENSPEMG00000016694) #28 Txnip (ENSPEMG00000010784) #30 Polr3gl (ENSPEMG00000014489) #31 Ankrd34a (ENSPEMG00000018493) #33 Lix1l (ENSPEMG00000009747) #34 ENSPEMG00000018117 #35 Pex11b (ENSPEMG00000030984) #36 Itga10 (ENSPEMG00000009215) #37 Ankrd35 (ENSPEMG00000005629) Pias3 (ENSPEMG00000003331) Nudt17 (ENSPEMG00000018269) Polr3c (ENSPEMG00000016322) Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000028679 ENSPEMG00000029970 ##23 ENSPEMG00000031078 ENSPEMG00000028544 #21 ENSPEMG00000028094 H1f4 (ENSPEMG00000030581) ENSPEMG00000030798 ENSPEMG00000031080 ##23 H1f6 (ENSPEMG00000009339) ENSPEMG00000025646 #21 Hfe (ENSPEMG00000010389) H1f2 (ENSPEMG00000008138) ENSPEMG00000029874 #22 ENSPEMG00000027714 ENSPEMG00000027552 ENSPEMG00000029640 #22 ENSPEMG00000025866 #21 ENSPEMG00000027771 #21 H3c1 (ENSPEMG00000027111) H1f1 (ENSPEMG00000024910) Trim38 (ENSPEMG00000016246) Slc17a2 (ENSPEMG00000012172) Slc17a3 (ENSPEMG00000004989) Slc17a1 (ENSPEMG00000006668) Slc17a4 (ENSPEMG00000006255) H2bc1 (ENSPEMG00000027369) H2ac1 (ENSPEMG00000031150) Carmil1 (ENSPEMG00000013402) Cmah (ENSPEMG00000016934) Ripor2 (ENSPEMG00000013612) Armh2 (ENSPEMG00000026805) Northern American deer mouse MODERN SPECIES 18 Carmil1 (ENSPEMG00000013402) H2ac1 (ENSPEMG00000031150) H2bc1 (ENSPEMG00000027369) Slc17a4 (ENSPEMG00000006255) Slc17a1 (ENSPEMG00000006668) Slc17a3 (ENSPEMG00000004989) Slc17a2 (ENSPEMG00000012172) Trim38 (ENSPEMG00000016246) H1f1 (ENSPEMG00000024910) H3c1 (ENSPEMG00000027111) ENSPEMG00000027771 #21 ENSPEMG00000025866 #21 ENSPEMG00000029640 #22 ENSPEMG00000027552 ENSPEMG00000027714 ENSPEMG00000029874 #22 H1f2 (ENSPEMG00000008138) Hfe (ENSPEMG00000010389) ENSPEMG00000025646 #21 H1f6 (ENSPEMG00000009339) ENSPEMG00000031080 ##23 ENSPEMG00000030798 H1f4 (ENSPEMG00000030581) ENSPEMG00000028094 ENSPEMG00000028544 #21 ENSPEMG00000031078 ENSPEMG00000029970 ##23 ENSPEMG00000028679 ENSPEMG00000027534 #20 H1f3 (ENSPEMG00000005204) ENSPEMG00000028580 ##21 Northern American deer mouse MODERN SPECIES 18 Vmn1r196 (ENSPEMG00000021962) ENSPEMG00000029198 ##23 ENSPEMG00000026525 ENSPEMG00000024590 #21 ENSPEMG00000027956 ##23 ENSPEMG00000028756 Prss16 (ENSPEMG00000022140) Pom121l2 (ENSPEMG00000030051) Zfp184 (ENSPEMG00000023916) ENSPEMG00000028170 ENSPEMG00000027887 ENSPEMG00000030497 #21 ENSPEMG00000029379 ##21 ENSPEMG00000031376 ##23 ENSPEMG00000028578 ENSPEMG00000026061 #22 ENSPEMG00000028118 H1f5 (ENSPEMG00000004979) ENSPEMG00000026031 ##23 ENSPEMG00000026109 ENSPEMG00000024444 #21 ENSPEMG00000028797 ##21 ENSPEMG00000028814 ENSPEMG00000025532 ENSPEMG00000027131 ENSPEMG00000027941 ##23 ENSPEMG00000024751 ENSPEMG00000026838 ENSPEMG00000027457 ENSPEMG00000024882 Or2w6 (ENSPEMG00000001581) Prairie vole DUPLICATION Prairie vole MODERN SPECIES 8 ENSMOCG00000017334 ENSMOCG00000007988 ENSMOCG00000011380 Etv3 (ENSMOCG00000016504) ENSMOCG00000020841 Fcrl5 (ENSMOCG00000016593) ##24 ENSMOCG00000018610 ##24 Cd5l (ENSMOCG00000014684) ENSMOCG00000007905 ENSMOCG00000022843 Fcrls (ENSMOCG00000011149) ##24 Kirrel (ENSMOCG00000022496) ENSMOCG00000000933 Fcgr1 (ENSMOCG00000016687) #24 H2bc18 (ENSMOCG00000007133) #23 ENSMOCG00000014664 #22 ENSMOCG00000008172 #20 ENSMOCG00000008702 #18 ENSMOCG00000002051 ##23 ENSMOCG00000007571 H2ac21 (ENSMOCG00000008450) Bola1 (ENSMOCG00000016236) #17 Sv2a (ENSMOCG00000000375) #16 ENSMOCG00000013658 #15 Mtmr11 (ENSMOCG00000017943) #14 Otud7b (ENSMOCG00000005067) #13 Vps45 (ENSMOCG00000014888) #12 Plekho1 (ENSMOCG00000016679) #11 Anp32e (ENSMOCG00000002258) #9 Car14 (ENSMOCG00000014152) #8 Aph1a (ENSMOCG00000022720) #7 Prairie vole MODERN SPECIES 3 ENSMOCG00000002290 ##23 ENSMOCG00000003221 ##21 ENSMOCG00000001222 ENSMOCG00000002479 ##23 ENSMOCG00000014071 ENSMOCG00000001692 ##23 H1f4 (ENSMOCG00000001986) ENSMOCG00000002682 ENSMOCG00000000429 ##23 H1f6 (ENSMOCG00000005143) ENSMOCG00000021002 ##21 Hfe (ENSMOCG00000022056) H1f2 (ENSMOCG00000002620) ENSMOCG00000001970 ENSMOCG00000016483 ENSMOCG00000002731 #22 ENSMOCG00000002982 #21 H3c1 (ENSMOCG00000002964) H1f1 (ENSMOCG00000002837) ENSMOCG00000013392 Slc17a2 (ENSMOCG00000017304) Slc17a3 (ENSMOCG00000010151) Slc17a1 (ENSMOCG00000022985) Slc17a4 (ENSMOCG00000015814) ENSMOCG00000002069 ENSMOCG00000005872 ENSMOCG00000016104 Scgn (ENSMOCG00000009115) Carmil1 (ENSMOCG00000012911) Cmah (ENSMOCG00000014889) ENSMOCG00000021606 Cricetinae ANCESTRAL SPECIES 78 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT00940000155501.a.b Golden Hamster MODERN SPECIES 623 ENSMAUG00000009634 Abt1 (ENSMAUG00000009396) Btn1a1 (ENSMAUG00000009319) Btn2a2 (ENSMAUG00000008943) ENSMAUG00000008468 ENSMAUG00000018294 #21 ENSMAUG00000018375 ##23 ENSMAUG00000011800 H2bc9 (ENSMAUG00000018325) ##23 ENSMAUG00000018354 H1f3 (ENSMAUG00000018389) ENSMAUG00000018261 #22 ENSMAUG00000011443 #21 H1f4 (ENSMAUG00000018344) H1f6 (ENSMAUG00000018283) ENSMAUG00000018397 #21 Hfe (ENSMAUG00000010990) H1f2 (ENSMAUG00000018231) ENSMAUG00000010306 ENSMAUG00000018201 ENSMAUG00000010096 #21 ENSMAUG00000009897 H1f1 (ENSMAUG00000018142) Trim38 (ENSMAUG00000007895) Slc17a2 (ENSMAUG00000007456) Slc17a3 (ENSMAUG00000006126) Slc17a1 (ENSMAUG00000004930) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001012092 #20 H1f2 (ENSCGRG00001009982) Hfe (ENSCGRG00001022484) ENSCGRG00001010840 #21 H1f6 (ENSCGRG00001008610) ENSCGRG00001010735 ##23 ENSCGRG00001008121 H1f4 (ENSCGRG00001009883) ENSCGRG00001018578 ##23 ENSCGRG00001013659 ##23 ENSCGRG00001010597 ENSCGRG00001009204 ENSCGRG00001008076 #21 ENSCGRG00001002972 ##23 ENSCGRG00001003737 ENSCGRG00001008834 #22 H1f3 (ENSCGRG00001009344) ENSCGRG00001008490 #21 ENSCGRG00001006524 #22 ENSCGRG00001008971 ##23 ENSCGRG00001017238 ENSCGRG00001010968 ##23 ENSCGRG00001010550 ##21 ENSCGRG00001010305 Btn2a2 (ENSCGRG00001019983) Btn1a1 (ENSCGRG00001013343) Abt1 (ENSCGRG00001002467) Zfp322a (ENSCGRG00001023553) ENSCGRG00001002420 ENSCGRG00001001272 ENSCGRG00001015553 Chinese hamster chok1gshd MODERN SPECIES 317 Vmn1r195 (ENSCGRG00001015083) Vmn1r196 (ENSCGRG00001009303) ENSCGRG00001018554 ##23 ENSCGRG00001008360 ENSCGRG00001017239 ##21 ENSCGRG00001006928 ##23 ENSCGRG00001007375 Prss16 (ENSCGRG00001007451) ENSCGRG00001021495 Zfp184 (ENSCGRG00001013320) ENSCGRG00001007219 ##23 ENSCGRG00001007023 ENSCGRG00001005448 ENSCGRG00001012199 ##23 ENSCGRG00001004775 ENSCGRG00001004680 #22 ENSCGRG00001005753 H1f5 (ENSCGRG00001009507) ENSCGRG00001009378 ##23 ENSCGRG00001008389 ENSCGRG00001006519 #21 ENSCGRG00001008581 #21 ENSCGRG00001004777 ENSCGRG00001007911 ENSCGRG00001010333 ENSCGRG00001017731 ENSCGRG00001005687 ENSCGRG00001003420 ENSCGRG00001002589 ENSCGRG00001011750 Or2w6 (ENSCGRG00001012060) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 66 Plekho1 (ENSCGRG00001011990) #11 Vps45 (ENSCGRG00001024791) #12 Otud7b (ENSCGRG00001023406) #13 Mtmr11 (ENSCGRG00001016961) #14 Sf3b4 (ENSCGRG00001003590) #15 Sv2a (ENSCGRG00001020508) #16 Bola1 (ENSCGRG00001011268) #17 H2ac21 (ENSCGRG00001011919) ENSCGRG00001009965 #18 ENSCGRG00001011428 ##23 ENSCGRG00001010190 #22 ENSCGRG00001010788 #18 ENSCGRG00001009035 #18 ENSCGRG00001009755 #20 ENSCGRG00001009153 #21 ENSCGRG00001009937 #22 H2bc18 (ENSCGRG00001006172) #23 ENSCGRG00001019293 Hjv (ENSCGRG00001009674) #28 Txnip (ENSCGRG00001010170) #30 Polr3gl (ENSCGRG00001023956) #31 Ankrd34a (ENSCGRG00001006698) #33 Lix1l (ENSCGRG00001012733) #34 ENSCGRG00001002681 #35 Pex11b (ENSCGRG00001007975) #36 Itga10 (ENSCGRG00001010836) #37 Ankrd35 (ENSCGRG00001015237) Pias3 (ENSCGRG00001023567) Nudt17 (ENSCGRG00001018476) Polr3c (ENSCGRG00001005471) Rnf115 (ENSCGRG00001002010) Chinese hamster chok1gshd MODERN SPECIES 66 Itga10 (ENSCGRG00001010836) #37 Pex11b (ENSCGRG00001007975) #36 ENSCGRG00001002681 #35 Lix1l (ENSCGRG00001012733) #34 Ankrd34a (ENSCGRG00001006698) #33 Polr3gl (ENSCGRG00001023956) #31 Txnip (ENSCGRG00001010170) #30 Hjv (ENSCGRG00001009674) #28 ENSCGRG00001019293 H2bc18 (ENSCGRG00001006172) #23 ENSCGRG00001009937 #22 ENSCGRG00001009153 #21 ENSCGRG00001009755 #20 ENSCGRG00001009035 #18 ENSCGRG00001010788 #18 ENSCGRG00001010190 #22 ENSCGRG00001011428 ##23 ENSCGRG00001009965 #18 H2ac21 (ENSCGRG00001011919) Bola1 (ENSCGRG00001011268) #17 Sv2a (ENSCGRG00001020508) #16 Sf3b4 (ENSCGRG00001003590) #15 Mtmr11 (ENSCGRG00001016961) #14 Otud7b (ENSCGRG00001023406) #13 Vps45 (ENSCGRG00001024791) #12 Plekho1 (ENSCGRG00001011990) #11 ENSCGRG00001017709 ##9 ENSCGRG00001022251 Car14 (ENSCGRG00001001363) #8 Aph1a (ENSCGRG00001024346) #7 BC028528 (ENSCGRG00001011710) Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001001748 ENSCGRG00001011965 ENSCGRG00001012015 ENSCGRG00001015553 ENSCGRG00001001272 ENSCGRG00001002420 Zfp322a (ENSCGRG00001023553) Abt1 (ENSCGRG00001002467) Btn1a1 (ENSCGRG00001013343) Btn2a2 (ENSCGRG00001019983) ENSCGRG00001010305 ENSCGRG00001010550 ##21 ENSCGRG00001010968 ##23 ENSCGRG00001017238 ENSCGRG00001008971 ##23 ENSCGRG00001006524 #22 ENSCGRG00001008490 #21 H1f3 (ENSCGRG00001009344) ENSCGRG00001008834 #22 ENSCGRG00001003737 ENSCGRG00001002972 ##23 ENSCGRG00001008076 #21 ENSCGRG00001009204 ENSCGRG00001010597 ENSCGRG00001013659 ##23 ENSCGRG00001018578 ##23 H1f4 (ENSCGRG00001009883) ENSCGRG00001008121 ENSCGRG00001010735 ##23 H1f6 (ENSCGRG00001008610) ENSCGRG00001010840 #21 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1243 Fcgr1 (ENSNGAG00000016194) #24 ENSNGAG00000012113 #20 ENSNGAG00000020540 #22 ENSNGAG00000004233 #22 ENSNGAG00000012728 #18 ENSNGAG00000011353 ##23 ENSNGAG00000023599 H2ac20 (ENSNGAG00000011075) H2ac21 (ENSNGAG00000011111) Bola1 (ENSNGAG00000024327) #17 Sv2a (ENSNGAG00000024242) #16 Sf3b4 (ENSNGAG00000016337) #15 Mtmr11 (ENSNGAG00000015085) #14 Otud7b (ENSNGAG00000019612) #13 Vps45 (ENSNGAG00000001159) #12 ENSNGAG00000005098 Plekho1 (ENSNGAG00000002001) #11 Anp32e (ENSNGAG00000010494) ##9 Upper Galilee mountains blind mole rat MODERN SPECIES 1243 ENSNGAG00000023116 Anp32e (ENSNGAG00000010494) ##9 Plekho1 (ENSNGAG00000002001) #11 ENSNGAG00000005098 Vps45 (ENSNGAG00000001159) #12 Otud7b (ENSNGAG00000019612) #13 Mtmr11 (ENSNGAG00000015085) #14 Sf3b4 (ENSNGAG00000016337) #15 Sv2a (ENSNGAG00000024242) #16 Bola1 (ENSNGAG00000024327) #17 H2ac21 (ENSNGAG00000011111) H2ac20 (ENSNGAG00000011075) ENSNGAG00000023599 ENSNGAG00000011353 ##23 ENSNGAG00000012728 #18 ENSNGAG00000004233 #22 ENSNGAG00000020540 #22 ENSNGAG00000012113 #20 Fcgr1 (ENSNGAG00000016194) #24 Upper Galilee mountains blind mole rat MODERN SPECIES 769 ENSNGAG00000017772 ENSNGAG00000019499 Zfp322a (ENSNGAG00000018458) Abt1 (ENSNGAG00000011004) Btn1a1 (ENSNGAG00000016601) Btn2a2 (ENSNGAG00000005096) ENSNGAG00000017676 #21 ENSNGAG00000018460 ##23 ENSNGAG00000018828 ENSNGAG00000017262 #22 ENSNGAG00000006078 #20 ENSNGAG00000020628 #20 ENSNGAG00000012803 #21 ENSNGAG00000009633 ENSNGAG00000008922 ENSNGAG00000018017 ENSNGAG00000017761 #22 ENSNGAG00000017588 #21 H1f4 (ENSNGAG00000001403) ENSNGAG00000019522 ENSNGAG00000017064 ##23 H1f6 (ENSNGAG00000010517) ENSNGAG00000010665 #21 Hfe (ENSNGAG00000016849) H1f2 (ENSNGAG00000004187) Upper Galilee mountains blind mole rat MODERN SPECIES 516 Vmn1r196 (ENSNGAG00000000421) ENSNGAG00000003182 ENSNGAG00000003390 ENSNGAG00000018350 #21 ENSNGAG00000001327 ##23 ENSNGAG00000018408 Prss16 (ENSNGAG00000017902) ENSNGAG00000016925 ENSNGAG00000018047 ENSNGAG00000001601 H2ac24 (ENSNGAG00000003629) ENSNGAG00000003563 ##21 ENSNGAG00000002211 ENSNGAG00000020779 #22 ENSNGAG00000002100 ENSNGAG00000002502 #21 ENSNGAG00000003052 ENSNGAG00000004217 ENSNGAG00000006564 #20 ENSNGAG00000004855 ENSNGAG00000005469 ##23 ENSNGAG00000005140 ENSNGAG00000001558 Upper Galilee mountains blind mole rat MODERN SPECIES 769 ENSNGAG00000019499 Zfp322a (ENSNGAG00000018458) Abt1 (ENSNGAG00000011004) Btn1a1 (ENSNGAG00000016601) Btn2a2 (ENSNGAG00000005096) ENSNGAG00000017676 #21 ENSNGAG00000018460 ##23 ENSNGAG00000018828 ENSNGAG00000017262 #22 ENSNGAG00000006078 #20 ENSNGAG00000020628 #20 ENSNGAG00000012803 #21 ENSNGAG00000009633 ENSNGAG00000008922 ENSNGAG00000018017 ENSNGAG00000017761 #22 ENSNGAG00000017588 #21 H1f4 (ENSNGAG00000001403) ENSNGAG00000019522 ENSNGAG00000017064 ##23 H1f6 (ENSNGAG00000010517) ENSNGAG00000010665 #21 Hfe (ENSNGAG00000016849) H1f2 (ENSNGAG00000004187) ENSNGAG00000007331 ENSNGAG00000010646 #20 ENSNGAG00000009026 #21 ENSNGAG00000010543 ##21 ENSNGAG00000011159 #20 H1f1 (ENSNGAG00000007966) Slc17a2 (ENSNGAG00000022747) Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 457 Trim27 (ENSDORG00000005051) ENSDORG00000025556 ENSDORG00000013621 Gpx6 (ENSDORG00000013619) ENSDORG00000014252 ENSDORG00000014251 Nkapl (ENSDORG00000025596) ENSDORG00000014249 ENSDORG00000025537 Zkscan8 (ENSDORG00000026493) ENSDORG00000026539 Or2b6 (ENSDORG00000008778) ENSDORG00000001796 ENSDORG00000024522 ##23 ENSDORG00000025297 ENSDORG00000026221 #22 ENSDORG00000030106 #21 ENSDORG00000023845 ##23 ENSDORG00000025697 #21 ENSDORG00000024419 ENSDORG00000029289 ENSDORG00000024249 ##23 ENSDORG00000000770 Pom121l2 (ENSDORG00000028474) Prss16 (ENSDORG00000010257) ENSDORG00000025002 ENSDORG00000028397 ##23 ENSDORG00000024794 #21 ENSDORG00000026404 ENSDORG00000025972 ##23 ENSDORG00000024279 Kangaroo rat MODERN SPECIES 345 Tlr5 (ENSDORG00000027996) Susd4 (ENSDORG00000012702) ENSDORG00000012704 Capn8 (ENSDORG00000012143) Capn2 (ENSDORG00000013919) Trp53bp2 (ENSDORG00000013922) ENSDORG00000024350 ENSDORG00000024805 ENSDORG00000004350 Fcgr1 (ENSDORG00000016350) #24 H2bc18 (ENSDORG00000028945) #23 ENSDORG00000029688 ENSDORG00000028205 ##21 ENSDORG00000025650 ENSDORG00000028881 #18 ENSDORG00000028335 #22 H2ac20 (ENSDORG00000024205) H2ac21 (ENSDORG00000024245) Bola1 (ENSDORG00000016364) #17 Sv2a (ENSDORG00000016365) #16 Sf3b4 (ENSDORG00000016366) #15 Mtmr11 (ENSDORG00000016368) #14 Otud7b (ENSDORG00000005008) #13 Vps45 (ENSDORG00000005012) #12 Plekho1 (ENSDORG00000005015) #11 ENSDORG00000011690 #9 Aph1a (ENSDORG00000011694) #7 BC028528 (ENSDORG00000011695) ENSDORG00000025269 Mrps21 (ENSDORG00000030111) Prpf3 (ENSDORG00000008664) Kangaroo rat MODERN SPECIES 152 ENSDORG00000025050 #18 ENSDORG00000028291 #22 Kangaroo rat MODERN SPECIES 523 BC005537 (ENSDORG00000024875) Gmnn (ENSDORG00000014569) Ripor2 (ENSDORG00000014570) Cmah (ENSDORG00000007165) Carmil1 (ENSDORG00000013666) Scgn (ENSDORG00000013668) H2bc1 (ENSDORG00000024877) Slc17a4 (ENSDORG00000011816) Slc17a1 (ENSDORG00000014554) Slc17a2 (ENSDORG00000014558) H1f1 (ENSDORG00000005238) ENSDORG00000025727 #21 ENSDORG00000028336 #20 ENSDORG00000027742 ENSDORG00000027130 ENSDORG00000025836 #22 ENSDORG00000005251 ENSDORG00000025947 ##23 ENSDORG00000027998 H1f4 (ENSDORG00000005256) ENSDORG00000024928 ##23 ENSDORG00000024715 ##23 ENSDORG00000025258 ENSDORG00000025950 #21 ENSDORG00000023996 ##23 ENSDORG00000030035 #21 Btn2a2 (ENSDORG00000000451) Btn1a1 (ENSDORG00000000452) ENSDORG00000029042 Abt1 (ENSDORG00000000454) Rodentia_A ANCESTRAL SPECIES ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #20 ENSGT00940000163082 ENSGT00940000160426 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01100000264175 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000007715 ENSHGLG00000006288 ENSHGLG00000007387 ENSHGLG00000011910 ENSHGLG00000043882 ENSHGLG00000044427 NKAPL (ENSHGLG00000035910) ENSHGLG00000043206 ENSHGLG00000005144 ENSHGLG00000039085 ENSHGLG00000005106 ENSHGLG00000037822 ENSHGLG00000005055 ENSHGLG00000049036 ENSHGLG00000050901 ENSHGLG00000033143 #22 ENSHGLG00000020815 ENSHGLG00000046806 ENSHGLG00000042768 ##23 ENSHGLG00000041663 ENSHGLG00000039390 ENSHGLG00000035121 ENSHGLG00000012917 EHMT1 (ENSHGLG00000013813) ENSHGLG00000045707 ARRDC1 (ENSHGLG00000014897) ZMYND19 (ENSHGLG00000035090) DPH7 (ENSHGLG00000035731) ENSHGLG00000015326 PNPLA7 (ENSHGLG00000042180) NSMF (ENSHGLG00000011789) Naked mole-rat female MODERN SPECIES 10 C1orf54 (ENSHGLG00000016156) APH1A (ENSHGLG00000009612) #7 CA14 (ENSHGLG00000035588) #8 ENSHGLG00000032045 ENSHGLG00000005468 #9 ENSHGLG00000015344 PLEKHO1 (ENSHGLG00000046314) #11 VPS45 (ENSHGLG00000018897) #12 OTUD7B (ENSHGLG00000019136) #13 MTMR11 (ENSHGLG00000013532) #14 SF3B4 (ENSHGLG00000012360) #15 SV2A (ENSHGLG00000011320) #16 BOLA1 (ENSHGLG00000033803) #17 ENSHGLG00000039058 ENSHGLG00000015936 ENSHGLG00000036146 #22 HIST1H4I (ENSHGLG00000040309) #21 ENSHGLG00000040039 #23 ENSHGLG00000038422 ENSHGLG00000009060 #24 ENSHGLG00000035132 #28 ENSHGLG00000005199 #30 ANKRD34A (ENSHGLG00000009270) #33 ENSHGLG00000005879 LIX1L (ENSHGLG00000008928) #34 RBM8A (ENSHGLG00000033593) #35 ENSHGLG00000006230 PEX11B (ENSHGLG00000005185) #36 ITGA10 (ENSHGLG00000010384) #37 ANKRD35 (ENSHGLG00000008812) PIAS3 (ENSHGLG00000005009) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000040774 ENSHGLG00000005661 ENSHGLG00000003968 ENSHGLG00000046171 ENSHGLG00000033066 ENSHGLG00000033181 ENSHGLG00000038843 ENSHGLG00000008348 ENSHGLG00000040861 ENSHGLG00000042296 ENSHGLG00000048990 HIST1H4I (ENSHGLG00000032537) ##21 ENSHGLG00000049422 ENSHGLG00000042290 ENSHGLG00000043227 ##23 ENSHGLG00000004694 #22 HIST1H4I (ENSHGLG00000047844) #21 ENSHGLG00000045351 ENSHGLG00000006505 ENSHGLG00000048321 ENSHGLG00000043363 ENSHGLG00000039281 ENSHGLG00000040977 HIST1H4I (ENSHGLG00000051005) #21 ENSHGLG00000038626 ##23 H1-4 (ENSHGLG00000045582) ENSHGLG00000040023 ENSHGLG00000033074 ##23 ENSHGLG00000006448 HIST1H1C (ENSHGLG00000049913) ENSHGLG00000042839 #20 Hystricomorpha_a ANCESTRAL SPECIES 59 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 108 ENSCPOG00000023684 GMDS (ENSCPOG00000012254) EXOC2 (ENSCPOG00000003605) IRF4 (ENSCPOG00000003562) DUSP22 (ENSCPOG00000013650) Cavporv1r658 (ENSCPOG00000033301) Cavporv1r655 (ENSCPOG00000034461) Cavporv1r654 (ENSCPOG00000022083) ENSCPOG00000032483 ##23 ENSCPOG00000040632 ENSCPOG00000037278 PRSS16 (ENSCPOG00000025072) ENSCPOG00000013183 ENSCPOG00000037797 ##23 ENSCPOG00000034040 ENSCPOG00000039185 #22 ENSCPOG00000032928 ENSCPOG00000039093 ##23 ENSCPOG00000040174 ENSCPOG00000035152 ENSCPOG00000033709 ##23 ENSCPOG00000012550 ENSCPOG00000024747 ENSCPOG00000027388 ZKSCAN8 (ENSCPOG00000001885) ZSCAN9 (ENSCPOG00000013706) NKAPL (ENSCPOG00000039853) ZSCAN26 (ENSCPOG00000039310) ENSCPOG00000035056 ENSCPOG00000026710 ENSCPOG00000030197 Guinea pig MODERN SPECIES 2 VPS45 (ENSCPOG00000002536) #12 OTUD7B (ENSCPOG00000001517) #13 MTMR11 (ENSCPOG00000008271) #14 SF3B4 (ENSCPOG00000008267) #15 SV2A (ENSCPOG00000010250) #16 BOLA1 (ENSCPOG00000010247) #17 H2AC21 (ENSCPOG00000030869) H2AC20 (ENSCPOG00000036942) ENSCPOG00000034161 ENSCPOG00000033740 #22 ENSCPOG00000034514 #18 ENSCPOG00000031424 ENSCPOG00000030965 ENSCPOG00000031270 #18 ENSCPOG00000030241 #21 ENSCPOG00000037353 #22 H2BC18 (ENSCPOG00000030049) #23 ENSCPOG00000033096 ENSCPOG00000040788 LINGO2 (ENSCPOG00000008899) C9orf72 (ENSCPOG00000009473) ENSCPOG00000000866 MOB3B (ENSCPOG00000009470) TEK (ENSCPOG00000009907) LRRC19 (ENSCPOG00000012981) IFT74 (ENSCPOG00000012980) PLAA (ENSCPOG00000012969) ENSCPOG00000032640 CAAP1 (ENSCPOG00000037143) ELAVL2 (ENSCPOG00000010472) DMRTA1 (ENSCPOG00000036480) Guinea pig MODERN SPECIES 2 LRRC19 (ENSCPOG00000012981) TEK (ENSCPOG00000009907) MOB3B (ENSCPOG00000009470) ENSCPOG00000000866 C9orf72 (ENSCPOG00000009473) LINGO2 (ENSCPOG00000008899) ENSCPOG00000040788 ENSCPOG00000033096 H2BC18 (ENSCPOG00000030049) #23 ENSCPOG00000037353 #22 ENSCPOG00000030241 #21 ENSCPOG00000031270 #18 ENSCPOG00000030965 ENSCPOG00000031424 ENSCPOG00000034514 #18 ENSCPOG00000033740 #22 ENSCPOG00000034161 H2AC20 (ENSCPOG00000036942) H2AC21 (ENSCPOG00000030869) BOLA1 (ENSCPOG00000010247) #17 SV2A (ENSCPOG00000010250) #16 SF3B4 (ENSCPOG00000008267) #15 MTMR11 (ENSCPOG00000008271) #14 OTUD7B (ENSCPOG00000001517) #13 VPS45 (ENSCPOG00000002536) #12 PLEKHO1 (ENSCPOG00000021117) #11 ANP32E (ENSCPOG00000013941) #9 CA14 (ENSCPOG00000006079) #8 APH1A (ENSCPOG00000006509) #7 C1orf54 (ENSCPOG00000026169) ENSCPOG00000035575 Hystricomorpha_b ANCESTRAL SPECIES 182 ENSGT01100000263474.a.b.b.f ENSGT01100000263559.A.f.e #22 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 120 C1orf54 (ENSCLAG00000012077) APH1A (ENSCLAG00000013532) #7 CA14 (ENSCLAG00000015749) #8 ANP32E (ENSCLAG00000016237) #9 PLEKHO1 (ENSCLAG00000011850) #11 VPS45 (ENSCLAG00000013589) #12 OTUD7B (ENSCLAG00000015021) #13 MTMR11 (ENSCLAG00000014280) #14 SF3B4 (ENSCLAG00000015851) #15 SV2A (ENSCLAG00000014270) #16 BOLA1 (ENSCLAG00000014314) #17 H2AC21 (ENSCLAG00000017864) H2AC20 (ENSCLAG00000017761) H2BC21 (ENSCLAG00000017898) ENSCLAG00000017827 H3-7 (ENSCLAG00000011860) #22 ENSCLAG00000018054 #21 H2BC18 (ENSCLAG00000017913) #23 FCGR1A (ENSCLAG00000012978) #24 ENSCLAG00000013809 ENSCLAG00000013150 PRMT8 (ENSCLAG00000014521) CRACR2A (ENSCLAG00000013246) PARP11 (ENSCLAG00000012852) CCND2 (ENSCLAG00000012527) TIGAR (ENSCLAG00000013103) FGF23 (ENSCLAG00000014451) FGF6 (ENSCLAG00000013612) C12orf4 (ENSCLAG00000012415) RAD51AP1 (ENSCLAG00000013907) DYRK4 (ENSCLAG00000016008) Long-tailed chinchilla MODERN SPECIES 190 H1-3 (ENSCLAG00000017591) ENSCLAG00000017552 #21 ENSCLAG00000017593 #20 ENSCLAG00000017451 ENSCLAG00000017446 #21 ENSCLAG00000017500 ##23 ENSCLAG00000001902 H2BC4 (ENSCLAG00000001916) ##23 ENSCLAG00000017464 #21 HFE (ENSCLAG00000002257) H1-2 (ENSCLAG00000017517) ENSCLAG00000017481 #20 ENSCLAG00000017519 H2BC3 (ENSCLAG00000002412) ENSCLAG00000017485 ENSCLAG00000002673 #22 ENSCLAG00000017508 #21 ENSCLAG00000017561 #21 ENSCLAG00000002704 H1-1 (ENSCLAG00000017524) ENSCLAG00000003371 ENSCLAG00000001925 ENSCLAG00000001954 SLC17A2 (ENSCLAG00000001995) SLC17A3 (ENSCLAG00000002031) SLC17A1 (ENSCLAG00000002155) SLC17A4 (ENSCLAG00000002246) ENSCLAG00000017468 H2AC1 (ENSCLAG00000017466) SCGN (ENSCLAG00000002363) CARMIL1 (ENSCLAG00000002103) Degu DUPLICATION Degu MODERN SPECIES 89 ENSODEG00000012686 ENSODEG00000013067 APH1A (ENSODEG00000011643) #7 CA14 (ENSODEG00000012540) #8 ENSODEG00000013093 #9 PLEKHO1 (ENSODEG00000011477) #11 VPS45 (ENSODEG00000012615) #12 ENSODEG00000019951 OTUD7B (ENSODEG00000011926) #13 MTMR11 (ENSODEG00000012623) #14 SV2A (ENSODEG00000011688) #16 BOLA1 (ENSODEG00000020128) #17 H2AC21 (ENSODEG00000019872) ENSODEG00000011653 ##23 H2BC21 (ENSODEG00000011247) ENSODEG00000013136 #22 ENSODEG00000020205 ##21 H2BC18 (ENSODEG00000020003) #23 EML6 (ENSODEG00000011885) ENSODEG00000012809 CLHC1 (ENSODEG00000012708) ENSODEG00000012372 RPS27A (ENSODEG00000013305) MTIF2 (ENSODEG00000013203) ENSODEG00000013135 CCDC88A (ENSODEG00000011846) ENSODEG00000014229 PPP4R3B (ENSODEG00000012869) PNPT1 (ENSODEG00000012137) ENSODEG00000012486 EFEMP1 (ENSODEG00000014621) Degu MODERN SPECIES 160 OR14J1 (ENSODEG00000020074) ENSODEG00000013745 ENSODEG00000012723 ENSODEG00000012485 ABT1 (ENSODEG00000014676) BTN1A1 (ENSODEG00000013656) BTN2A2 (ENSODEG00000013492) ENSODEG00000020041 ENSODEG00000014935 ENSODEG00000015343 #21 ENSODEG00000013504 ##22 ENSODEG00000013667 #20 ENSODEG00000013885 #22 ENSODEG00000013815 #21 ENSODEG00000013335 #21 ENSODEG00000015259 #21 ENSODEG00000013294 ENSODEG00000013476 ##23 HFE (ENSODEG00000015440) ENSODEG00000013990 #20 H1-1 (ENSODEG00000020218) ENSODEG00000020110 ENSODEG00000020246 SLC17A2 (ENSODEG00000013372) SLC17A3 (ENSODEG00000013677) SLC17A1 (ENSODEG00000014265) SLC17A4 (ENSODEG00000014939) ENSODEG00000020202 Sciuridae ANCESTRAL SPECIES 1 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.s ##23 ENSGT00940000163525 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263575.A ENSGT01100000263575.B.t.a.b ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT00940000153118.db.b ENSGT01060000248528.b.jh.a.a.a ##21 ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000153118.db.a.a.a ENSGT01100000263795 ENSGT00940000155501.a.b ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #20 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.b ENSGT00990000203553.c.b Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES ENSSVLG00005000516 OTUD7B (ENSSVLG00005000477) #13 MTMR11 (ENSSVLG00005000407) #14 SF3B4 (ENSSVLG00005000373) #15 SV2A (ENSSVLG00005000231) #16 BOLA1 (ENSSVLG00005000149) #17 H2AC21 (ENSSVLG00005000146) H2AC20 (ENSSVLG00005000144) H2BC21 (ENSSVLG00005000140) H2AC19 (ENSSVLG00005000135) #18 ENSSVLG00005000132 ENSSVLG00005000127 ENSSVLG00005000124 #18 ENSSVLG00005000095 #22 ENSSVLG00005000088 #21 ENSSVLG00005004594 #22 H2BC18 (ENSSVLG00005004581) #23 FCGR1A (ENSSVLG00005004523) #24 HJV (ENSSVLG00005004426) #28 TXNIP (ENSSVLG00005004403) #30 POLR3GL (ENSSVLG00005004386) ANKRD34A (ENSSVLG00005004364) #33 LIX1L (ENSSVLG00005004342) #34 RBM8A (ENSSVLG00005004314) #35 ENSSVLG00005004296 PEX11B (ENSSVLG00005004265) #36 ITGA10 (ENSSVLG00005004180) #37 ANKRD35 (ENSSVLG00005004120) PIAS3 (ENSSVLG00005004062) NUDT17 (ENSSVLG00005004030) POLR3C (ENSSVLG00005004005) Eurasian red squirrel MODERN SPECIES PLEKHO1 (ENSSVLG00005000612) #11 ENSSVLG00005000542 #12 ENSSVLG00005000516 OTUD7B (ENSSVLG00005000477) #13 MTMR11 (ENSSVLG00005000407) #14 SF3B4 (ENSSVLG00005000373) #15 SV2A (ENSSVLG00005000231) #16 BOLA1 (ENSSVLG00005000149) #17 H2AC21 (ENSSVLG00005000146) H2AC20 (ENSSVLG00005000144) H2BC21 (ENSSVLG00005000140) H2AC19 (ENSSVLG00005000135) #18 ENSSVLG00005000132 ENSSVLG00005000127 ENSSVLG00005000124 #18 ENSSVLG00005000095 #22 ENSSVLG00005000088 #21 ENSSVLG00005004594 #22 H2BC18 (ENSSVLG00005004581) #23 FCGR1A (ENSSVLG00005004523) #24 HJV (ENSSVLG00005004426) #28 TXNIP (ENSSVLG00005004403) #30 POLR3GL (ENSSVLG00005004386) ANKRD34A (ENSSVLG00005004364) #33 LIX1L (ENSSVLG00005004342) #34 RBM8A (ENSSVLG00005004314) #35 ENSSVLG00005004296 PEX11B (ENSSVLG00005004265) #36 ITGA10 (ENSSVLG00005004180) #37 ANKRD35 (ENSSVLG00005004120) PIAS3 (ENSSVLG00005004062) Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005016824 ENSSVLG00005016812 ##23 ENSSVLG00005016774 ENSSVLG00005016737 ENSSVLG00005016712 ENSSVLG00005016668 ENSSVLG00005016620 ENSSVLG00005016586 ABT1 (ENSSVLG00005016454) BTN1A1 (ENSSVLG00005016378) BTN2A2 (ENSSVLG00005016352) ENSSVLG00005015971 ENSSVLG00005015918 #21 ENSSVLG00005015900 ENSSVLG00005015881 ENSSVLG00005015860 #22 ENSSVLG00005015847 ##21 H1-3 (ENSSVLG00005015829) ENSSVLG00005015808 ##23 H2AC7 (ENSSVLG00005015788) ENSSVLG00005015768 #22 ENSSVLG00005015745 ##21 ENSSVLG00005015689 ENSSVLG00005015665 H1-4 (ENSSVLG00005015645) H2AC6 (ENSSVLG00005015625) H2BC4 (ENSSVLG00005015614) ##23 H1-6 (ENSSVLG00005015594) ENSSVLG00005015579 #21 ENSSVLG00005015136 ENSSVLG00005015027 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005016668 ENSSVLG00005016620 ENSSVLG00005016586 ABT1 (ENSSVLG00005016454) BTN1A1 (ENSSVLG00005016378) BTN2A2 (ENSSVLG00005016352) ENSSVLG00005015971 ENSSVLG00005015918 #21 ENSSVLG00005015900 ENSSVLG00005015881 ENSSVLG00005015860 #22 ENSSVLG00005015847 ##21 H1-3 (ENSSVLG00005015829) ENSSVLG00005015808 ##23 H2AC7 (ENSSVLG00005015788) ENSSVLG00005015768 #22 ENSSVLG00005015745 ##21 ENSSVLG00005015689 ENSSVLG00005015665 H1-4 (ENSSVLG00005015645) H2AC6 (ENSSVLG00005015625) H2BC4 (ENSSVLG00005015614) ##23 H1-6 (ENSSVLG00005015594) ENSSVLG00005015579 #21 ENSSVLG00005015136 ENSSVLG00005015027 ENSSVLG00005015008 ##23 ENSSVLG00005014988 #21 ENSSVLG00005014863 H1-2 (ENSSVLG00005014836) ENSSVLG00005014821 #20 Marmotini ANCESTRAL SPECIES 40 ENSGT01100000263486.a.b.b ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b ENSGT00940000153092.a.a.d.b ENSGT01100000263514.A.e.a.b.a.a.d ENSGT00940000162950 ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.l ##23 ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.k.b ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e #22 ENSGT00940000153118.db.b ENSGT01100000263474.a.b.b.e.a.a.b ENSGT00940000162941 ENSGT00940000153253.b.a.h ENSGT00940000160281 ENSGT00940000153125.C ENSGT01030000234553.b.b.c.b.a.c.a.b.b.a.b ENSGT00940000162956 ENSGT00390000002062 ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000162723 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT00940000155501.a.a Marmotini_b ANCESTRAL SPECIES 397 ENSGT01100000263559.A.f.e #22 ENSGT00940000153118.db.b Squirrel MODERN SPECIES 271 ENSSTOG00000030249 ENSSTOG00000033423 ENSSTOG00000029728 ENSSTOG00000023645 ENSSTOG00000033773 ENSSTOG00000030654 ENSSTOG00000028749 ##23 ENSSTOG00000026144 ENSSTOG00000023310 ##21 H2BC12 (ENSSTOG00000029261) ##23 H2AC12 (ENSSTOG00000007236) PRSS16 (ENSSTOG00000005984) ENSSTOG00000030356 ENSSTOG00000034579 ENSSTOG00000031831 ENSSTOG00000030706 #22 ENSSTOG00000031850 ENSSTOG00000023857 ENSSTOG00000020367 ##23 ENSSTOG00000006125 H1-5 (ENSSTOG00000006133) ENSSTOG00000028684 ENSSTOG00000022024 #21 ENSSTOG00000032396 ENSSTOG00000027672 ENSSTOG00000023688 ENSSTOG00000004326 ENSSTOG00000019623 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 85 PRPF3 (ENSMMMG00000019495) CIART (ENSMMMG00000019509) C1orf54 (ENSMMMG00000019516) APH1A (ENSMMMG00000019524) #7 CA14 (ENSMMMG00000019528) #8 ENSMMMG00000019537 #9 PLEKHO1 (ENSMMMG00000019549) #11 VPS45 (ENSMMMG00000019551) #12 OTUD7B (ENSMMMG00000019569) #13 MTMR11 (ENSMMMG00000019604) #14 ENSMMMG00000019615 #15 SV2A (ENSMMMG00000019622) #16 H2AC20 (ENSMMMG00000019626) H2BC21 (ENSMMMG00000019629) ENSMMMG00000019631 #21 ENSMMMG00000019638 #22 H2BC18 (ENSMMMG00000019640) #23 FCGR1A (ENSMMMG00000019645) #24 ENSMMMG00000019733 Alpin marmot MODERN SPECIES 36 ENSMMMG00000002756 ENSMMMG00000002753 ENSMMMG00000002747 ENSMMMG00000002733 ENSMMMG00000002722 #21 ENSMMMG00000002717 H1-5 (ENSMMMG00000002713) ENSMMMG00000002666 ##23 ENSMMMG00000002660 ENSMMMG00000002656 ENSMMMG00000002649 #21 ENSMMMG00000002642 ##23 ENSMMMG00000002580 ENSMMMG00000002574 #22 ENSMMMG00000002552 ENSMMMG00000002542 ##23 ENSMMMG00000002530 ZNF184 (ENSMMMG00000002511) ENSMMMG00000002497 ENSMMMG00000002485 ENSMMMG00000002473 ENSMMMG00000002438 ENSMMMG00000002431 ##23 ENSMMMG00000002427 #21 ENSMMMG00000002421 ENSMMMG00000002413 ##23 ENSMMMG00000002407 ENSMMMG00000002403 ZNF322 (ENSMMMG00000002401) Alpin marmot MODERN SPECIES 36 BTN1A1 (ENSMMMG00000002339) BTN2A2 (ENSMMMG00000002247) ENSMMMG00000002131 ENSMMMG00000002108 ##21 ENSMMMG00000002069 ##23 ENSMMMG00000002062 ENSMMMG00000002058 ENSMMMG00000002055 ##23 ENSMMMG00000002041 ENSMMMG00000002037 #21 H1-3 (ENSMMMG00000002023) ENSMMMG00000001989 ENSMMMG00000001983 ENSMMMG00000001975 ##23 ENSMMMG00000001937 ENSMMMG00000001926 #22 ENSMMMG00000001920 #21 ENSMMMG00000001916 ##23 ENSMMMG00000001889 ##23 H1-4 (ENSMMMG00000001870) H2AC6 (ENSMMMG00000001865) ENSMMMG00000001860 ##23 H1-6 (ENSMMMG00000001853) ENSMMMG00000001847 #21 HFE (ENSMMMG00000001838) H1-2 (ENSMMMG00000001827) ENSMMMG00000001825 #20 H2BC3 (ENSMMMG00000001823) H2AC4 (ENSMMMG00000001814) ENSMMMG00000001805 #20 ENSMMMG00000001800 #21 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Pika MODERN SPECIES 4549 PLEKHO1 (ENSOPRG00000010923) #11 VPS45 (ENSOPRG00000010903) #12 OTUD7B (ENSOPRG00000010849) #13 MTMR11 (ENSOPRG00000010825) #14 SF3B4 (ENSOPRG00000010808) #15 SV2A (ENSOPRG00000010799) #16 BOLA1 (ENSOPRG00000010793) #17 H2AC21 (ENSOPRG00000010790) H2AC20 (ENSOPRG00000010787) H2BC21 (ENSOPRG00000010785) H3C15 (ENSOPRG00000010778) #20 ENSOPRG00000010773 #18 ENSOPRG00000010770 #18 ENSOPRG00000010762 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 4 CA14 (ENSOCUG00000009032) #8 ENSOCUG00000022805 #9 PLEKHO1 (ENSOCUG00000006316) #11 ENSOCUG00000014360 #12 OTUD7B (ENSOCUG00000013924) #13 MTMR11 (ENSOCUG00000004616) #14 SF3B4 (ENSOCUG00000004614) #15 SV2A (ENSOCUG00000003894) #16 BOLA1 (ENSOCUG00000004609) #17 ENSOCUG00000037254 H2BC21 (ENSOCUG00000023535) ENSOCUG00000023564 ENSOCUG00000025918 #18 ENSOCUG00000027315 #22 ENSOCUG00000031190 ENSOCUG00000023811 #22 H2BC18 (ENSOCUG00000024543) #23 ENSOCUG00000003403 #24 ENSOCUG00000038567 #24 ENSOCUG00000022427 ENSOCUG00000021718 ENSOCUG00000023196 HJV (ENSOCUG00000006209) #28 ENSOCUG00000007257 TXNIP (ENSOCUG00000003010) #30 POLR3GL (ENSOCUG00000006212) ANKRD34A (ENSOCUG00000029638) #33 LIX1L (ENSOCUG00000003018) #34 RBM8A (ENSOCUG00000025693) #35 PEX11B (ENSOCUG00000003029) #36 ITGA10 (ENSOCUG00000003032) #37 Rabbit MODERN SPECIES 4 C1orf54 (ENSOCUG00000027251) APH1A (ENSOCUG00000009037) #7 CA14 (ENSOCUG00000009032) #8 ENSOCUG00000022805 #9 PLEKHO1 (ENSOCUG00000006316) #11 ENSOCUG00000014360 #12 OTUD7B (ENSOCUG00000013924) #13 MTMR11 (ENSOCUG00000004616) #14 SF3B4 (ENSOCUG00000004614) #15 SV2A (ENSOCUG00000003894) #16 BOLA1 (ENSOCUG00000004609) #17 ENSOCUG00000037254 H2BC21 (ENSOCUG00000023535) ENSOCUG00000023564 ENSOCUG00000025918 #18 ENSOCUG00000027315 #22 ENSOCUG00000031190 ENSOCUG00000023811 #22 H2BC18 (ENSOCUG00000024543) #23 ENSOCUG00000003403 #24 ENSOCUG00000038567 #24 ENSOCUG00000022427 ENSOCUG00000021718 ENSOCUG00000023196 HJV (ENSOCUG00000006209) #28 ENSOCUG00000007257 TXNIP (ENSOCUG00000003010) #30 POLR3GL (ENSOCUG00000006212) ANKRD34A (ENSOCUG00000029638) #33 LIX1L (ENSOCUG00000003018) #34 RBM8A (ENSOCUG00000025693) #35 Primates ANCESTRAL SPECIES 7 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263506.a.e.a.b ##23 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163388 ENSGT00940000163486 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a ENSGT01100000263486.a.b.a.b.a ENSGT01100000263486.a.b.b ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163082 ENSGT00940000162950 ENSGT01100000263474.a.b.b.e.a.a.b ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000160281 ENSGT00940000153125.A ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 Bushbaby MODERN SPECIES 289 CIART (ENSOGAG00000004846) APH1A (ENSOGAG00000004843) #7 CA14 (ENSOGAG00000004842) #8 ANP32E (ENSOGAG00000004841) #9 PLEKHO1 (ENSOGAG00000006275) #11 VPS45 (ENSOGAG00000006271) #12 OTUD7B (ENSOGAG00000030526) #13 MTMR11 (ENSOGAG00000006266) #14 SF3B4 (ENSOGAG00000006265) #15 SV2A (ENSOGAG00000006260) #16 BOLA1 (ENSOGAG00000032964) #17 H2AC21 (ENSOGAG00000006258) H2AC20 (ENSOGAG00000006256) ENSOGAG00000006255 ENSOGAG00000027485 #21 H3-7 (ENSOGAG00000006253) #22 H2BC18 (ENSOGAG00000032731) #23 FCGR1A (ENSOGAG00000014101) #24 ENSOGAG00000024879 ENSOGAG00000028082 Lemuriformes ANCESTRAL SPECIES 58 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000155501.a.b ENSGT00990000203553.c.b ENSGT01100000263567.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.b.a.a.a ##23 ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT01100000263506.a.e.a.a.a.a.a ##23 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 ENSGT00940000153125.B ENSGT00940000153125.C ENSGT00940000160281 ENSGT00940000153104.e.b.a.b ENSGT00940000162941 ENSGT00940000153125.E.d ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00420000029746.f Lemuriformes_a ANCESTRAL SPECIES 19 ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT00940000153118.db.a.a.b.a.a ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 ENSGT00500000045038 ENSGT00390000011497 Greater bamboo lemur MODERN SPECIES 1644 ENSPSMG00000003529 ENSPSMG00000003539 #18 ENSPSMG00000003546 #22 ENSPSMG00000003549 #21 H2BC18 (ENSPSMG00000003555) #23 FCGR1A (ENSPSMG00000003570) #24 ENSPSMG00000003576 ENSPSMG00000003579 Coquerels sifaka MODERN SPECIES 750 ENSPCOG00000015554 FCGR1A (ENSPCOG00000016186) #24 H3C13 (ENSPCOG00000011308) #20 ENSPCOG00000011101 #21 ENSPCOG00000005500 #18 ENSPCOG00000011625 #18 ENSPCOG00000012693 #22 H2BC21 (ENSPCOG00000010375) H2AC20 (ENSPCOG00000011857) SV2A (ENSPCOG00000018151) #16 SF3B4 (ENSPCOG00000015399) #15 MTMR11 (ENSPCOG00000027870) #14 OTUD7B (ENSPCOG00000028177) #13 VPS45 (ENSPCOG00000011875) #12 PLEKHO1 (ENSPCOG00000027826) #11 ANP32E (ENSPCOG00000022218) #9 CA14 (ENSPCOG00000025811) #8 APH1A (ENSPCOG00000016266) #7 C1orf54 (ENSPCOG00000006128) CIART (ENSPCOG00000018797) ENSPCOG00000023504 PRPF3 (ENSPCOG00000013828) Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263575.B.u ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.A ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT01060000248528.b.jh.a.b ##21 ENSGT00940000158017 ENSGT00940000162723 ENSGT00940000163835 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT00940000162956 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT00940000153125.D.a.b Tarsier MODERN SPECIES 4185 H2AC19 (ENSTSYG00000031574) #18 ENSTSYG00000033807 #22 ENSTSYG00000033976 #21 H2BC18 (ENSTSYG00000026570) #23 FCGR1A (ENSTSYG00000008821) #24 Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b.a #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.b ENSGT01100000263575.B.u ENSGT00940000160426 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.A ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT01060000248528.b.kh.yb.b.b.b.a #21 ENSGT01060000248528.b.jh.a.b ##21 ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000163036 ENSGT00940000163835 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b Platyrrhini ANCESTRAL SPECIES 12 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.o #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.a.a ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Cebidae ANCESTRAL SPECIES 12 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.o #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.a.a ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.b.b.a.a #21 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Marmoset MODERN SPECIES 9 CA14 (ENSCJAG00000009756) #8 ANP32E (ENSCJAG00000009710) #9 PLEKHO1 (ENSCJAG00000000867) #11 VPS45 (ENSCJAG00000000845) #12 OTUD7B (ENSCJAG00000000821) #13 MTMR11 (ENSCJAG00000000802) #14 SF3B4 (ENSCJAG00000042351) #15 SV2A (ENSCJAG00000000779) #16 BOLA1 (ENSCJAG00000044018) #17 H2AC20 (ENSCJAG00000048427) H2BC21 (ENSCJAG00000081464) ENSCJAG00000086954 #21 ENSCJAG00000078934 #20 ENSCJAG00000078694 #18 H2AC18 (ENSCJAG00000073890) #18 ENSCJAG00000083438 #22 ENSCJAG00000087228 #21 H2BC18 (ENSCJAG00000041683) #23 ENSCJAG00000074017 FCGR1A (ENSCJAG00000000771) #24 ENSCJAG00000069867 ENSCJAG00000084089 ENSCJAG00000078453 ENSCJAG00000062347 ENSCJAG00000020687 ENSCJAG00000084541 ENSCJAG00000081006 ENSCJAG00000083457 ENSCJAG00000086209 HJV (ENSCJAG00000041142) #28 TXNIP (ENSCJAG00000002161) #30 Cebidae_a ANCESTRAL SPECIES 6 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.o #15 ENSGT00950000182940.b.a.b #16 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.a.a ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 Bolivian squirrel monkey MODERN SPECIES 194 APH1A (ENSSBOG00000025150) #7 CA14 (ENSSBOG00000024949) #8 ANP32E (ENSSBOG00000033935) #9 PLEKHO1 (ENSSBOG00000031989) #11 VPS45 (ENSSBOG00000029517) #12 OTUD7B (ENSSBOG00000022601) #13 MTMR11 (ENSSBOG00000018459) #14 ENSSBOG00000012310 #15 SV2A (ENSSBOG00000030706) #16 H2AC21 (ENSSBOG00000017659) H2AC20 (ENSSBOG00000019840) ENSSBOG00000008360 ENSSBOG00000015704 #21 ENSSBOG00000014986 #20 H2AC19 (ENSSBOG00000019167) #18 H3-7 (ENSSBOG00000018931) #22 H2BC18 (ENSSBOG00000030913) #23 FCGR1A (ENSSBOG00000035681) #24 Capuchin MODERN SPECIES 188 ENSCCAG00000036223 #24 H2BC18 (ENSCCAG00000036311) #23 ENSCCAG00000029951 ENSCCAG00000013177 ##22 H2AC18 (ENSCCAG00000020282) #18 ENSCCAG00000026615 #18 ENSCCAG00000000823 #22 ENSCCAG00000034681 H2BC21 (ENSCCAG00000020545) H2AC20 (ENSCCAG00000005773) H2AC21 (ENSCCAG00000020094) SV2A (ENSCCAG00000035849) #16 ENSCCAG00000021751 #15 MTMR11 (ENSCCAG00000035057) #14 OTUD7B (ENSCCAG00000036948) #13 VPS45 (ENSCCAG00000037065) #12 PLEKHO1 (ENSCCAG00000033185) #11 ENSCCAG00000020910 CA14 (ENSCCAG00000023681) #8 APH1A (ENSCCAG00000036376) #7 C1orf54 (ENSCCAG00000032327) CIART (ENSCCAG00000027921) Catarrhini ANCESTRAL SPECIES 10 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b ENSGT01060000248528.b.kh.yb.b.b.b.b #21 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000162941 ENSGT00910000147164 ENSGT00910000147195 ENSGT00950000183105.B.a.a.a.a ENSGT01100000263506.a.f.b ##23 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000153125.E.c.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.A ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT01100000263567.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e #22 ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01060000248528.b.kh.yb.b.b.b.b #21 ENSGT01020000230360.c.b.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.D.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000162950 ENSGT00940000163388 ENSGT00940000163165 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00420000029746.f.c.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 ENSGT00940000160493 ENSGT00940000159284 ENSGT00420000029746.e.a.b.b.b.a ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 Vervet Monkey MODERN SPECIES 43 H2AC19 (ENSCSAG00000000206) #18 ENSCSAG00000000205 #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.t.a.b ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b Cercopithecinae_b ANCESTRAL SPECIES 134 ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e #22 Cercopithecinae_d ANCESTRAL SPECIES 131 ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01060000248528.b.kh.yb.b.a.lb.a #21 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00940000154913.g.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C ENSGT00940000158408 ENSGT00730000110915.b ENSGT00940000159402 Drill MODERN SPECIES 1144 ENSMLEG00000013337 #18 ENSMLEG00000014337 #21 ENSMLEG00000024345 #21 H3-7 (ENSMLEG00000010141) #22 H2BC18 (ENSMLEG00000038899) #23 FCGR1A (ENSMLEG00000029459) #24 ENSMLEG00000035616 ENSMLEG00000037359 ENSMLEG00000030019 ENSMLEG00000036897 ENSMLEG00000037305 GJA8 (ENSMLEG00000031211) GJA5 (ENSMLEG00000020313) ACP6 (ENSMLEG00000030267) BCL9 (ENSMLEG00000034454) ENSMLEG00000029668 Macaca ANCESTRAL SPECIES 79 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 Macaca_a ANCESTRAL SPECIES ENSGT01100000263559.A.f.e #22 Rhesus MODERN SPECIES 14 H2AC12 (ENSMMUG00000061750) H2BC12 (ENSMMUG00000058189) ##23 H4C9 (ENSMMUG00000057258) #21 H2AC11 (ENSMMUG00000052414) H2BC11 (ENSMMUG00000040348) ##23 ZNF322 (ENSMMUG00000017480) ENSMMUG00000055937 ABT1 (ENSMMUG00000060813) HMGN4 (ENSMMUG00000029909) BTN1A1 (ENSMMUG00000023008) BTN2A2 (ENSMMUG00000065003) BTN3A3 (ENSMMUG00000021971) H4C8 (ENSMMUG00000059737) #21 H3C8 (ENSMMUG00000054702) H2BC9 (ENSMMUG00000045038) ##23 H3C7 (ENSMMUG00000051224) #22 H4C6 (ENSMMUG00000060751) #21 H1-3 (ENSMMUG00000022050) H3C6 (ENSMMUG00000055425) H2AC8 (ENSMMUG00000060663) H2BC8 (ENSMMUG00000063339) ##23 H4C5 (ENSMMUG00000060950) #21 H2BC7 (ENSMMUG00000052621) ##23 ENSMMUG00000041744 H4C4 (ENSMMUG00000056028) #21 H2BC6 (ENSMMUG00000061648) ##23 H2BC5 (ENSMMUG00000041727) H1-4 (ENSMMUG00000023748) H2AC6 (ENSMMUG00000060294) H2BC4 (ENSMMUG00000057462) ##23 H1-6 (ENSMMUG00000051980) Pig-tailed macaque MODERN SPECIES 556 ENSMNEG00000039748 ENSMNEG00000038867 ENSMNEG00000040511 ENSMNEG00000040861 ENSMNEG00000043241 ENSMNEG00000039666 ENSMNEG00000034285 ENSMNEG00000042265 ENSMNEG00000042893 FCGR1A (ENSMNEG00000033591) #24 H2BC18 (ENSMNEG00000038342) #23 H3C13 (ENSMNEG00000026749) #20 ENSMNEG00000007282 #21 ENSMNEG00000034002 H2AC19 (ENSMNEG00000011270) #18 ENSMNEG00000015126 #22 Rhinopithecus ANCESTRAL SPECIES 710 ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b Black snub-nosed monkey MODERN SPECIES 846 H3-7 (ENSRBIG00000015383) #22 H2BC18 (ENSRBIG00000035220) #23 FCGR1A (ENSRBIG00000038615) #24 ENSRBIG00000035418 ENSRBIG00000040328 ENSRBIG00000036231 ENSRBIG00000040725 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1730 H3-7 (ENSRROG00000015656) #22 FCGR1A (ENSRROG00000040166) #24 H2BC18 (ENSRROG00000029908) #23 ENSRROG00000032255 Golden snub-nosed monkey MODERN SPECIES 161 ENSRROG00000038449 #22 Hominoidea ANCESTRAL SPECIES 7 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00390000009543.d ENSGT00420000029746.f.c Hominidae ANCESTRAL SPECIES 6 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00390000009543.d ENSGT00420000029746.f.c Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00390000009543.d ENSGT00420000029746.f.c Gorilla MODERN SPECIES PLEKHO1 (ENSGGOG00000002021) #11 VPS45 (ENSGGOG00000026516) #12 OTUD7B (ENSGGOG00000024965) #13 MTMR11 (ENSGGOG00000004764) #14 SF3B4 (ENSGGOG00000004761) #15 SV2A (ENSGGOG00000002959) #16 BOLA1 (ENSGGOG00000002957) #17 H2AC21 (ENSGGOG00000040311) HIST2H2AC (ENSGGOG00000040152) H2BC21 (ENSGGOG00000036989) ENSGGOG00000036863 #21 HIST2H3A (ENSGGOG00000037264) #20 HIST2H2AA3 (ENSGGOG00000040128) #18 ENSGGOG00000040718 ##23 HIST2H2AA3 (ENSGGOG00000043514) #18 HIST2H3A (ENSGGOG00000041476) #22 ENSGGOG00000039364 #21 ENSGGOG00000036188 ENSGGOG00000041808 #23 ENSGGOG00000039911 #24 ENSGGOG00000037739 ENSGGOG00000037973 ENSGGOG00000041997 ENSGGOG00000039869 ENSGGOG00000043630 ENSGGOG00000040707 ENSGGOG00000015122 ENSGGOG00000023207 ENSGGOG00000041180 ENSGGOG00000016010 ENSGGOG00000005749 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00390000009543.d ENSGT00420000029746.f.c Human MODERN SPECIES PIAS3 (ENSG00000131788) NUDT17 (ENSG00000186364) POLR3C (ENSG00000186141) RNF115 (ENSG00000265491) CD160 (ENSG00000117281) PDZK1 (ENSG00000174827) GPR89A (ENSG00000117262) NBPF20 (ENSG00000162825) PPIAL4D (ENSG00000289549) FAM72D (ENSG00000215784) SRGAP2B (ENSG00000196369) PPIAL4F (ENSG00000279782) NBPF15 (ENSG00000266338) PPIAL4E (ENSG00000271567) FAM72C (ENSG00000263513) H3-7 (ENSG00000273213) #22 SRGAP2C (ENSG00000171943) FAM72B (ENSG00000188610) PPIAL4A (ENSG00000263353) NBPF26 (ENSG00000273136) NOTCH2NLR (ENSG00000286106) NBPF8 (ENSG00000270231) SEC22B (ENSG00000265808) NOTCH2 (ENSG00000134250) ADAM30 (ENSG00000134249) REG4 (ENSG00000134193) HMGCS2 (ENSG00000134240) PHGDH (ENSG00000092621) ZNF697 (ENSG00000143067) HSD3B1 (ENSG00000203857) HSD3B2 (ENSG00000203859) Pan ANCESTRAL SPECIES ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.m #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.A.f.e #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00940000160915.e.b ENSGT00390000009543.d.c ENSGT00420000029746.f.c.d ENSGT00910000147491.a ENSGT00420000029746.e.a.b.b.b.d ENSGT00910000145223.a.a ENSGT00390000009543.d.d ENSGT00420000029746.f.c.c ENSGT00940000160258.e ENSGT00940000155416.a.a ENSGT00940000157663 ENSGT00940000158169 ENSGT00390000015805 Bonobo DUPLICATION Bonobo MODERN SPECIES CIART (ENSPPAG00000043860) C1orf54 (ENSPPAG00000041323) APH1A (ENSPPAG00000033416) #7 CA14 (ENSPPAG00000027877) #8 ANP32E (ENSPPAG00000032079) #9 PLEKHO1 (ENSPPAG00000035597) #11 VPS45 (ENSPPAG00000039563) #12 OTUD7B (ENSPPAG00000027439) #13 MTMR11 (ENSPPAG00000030287) #14 SF3B4 (ENSPPAG00000040904) #15 SV2A (ENSPPAG00000028470) #16 BOLA1 (ENSPPAG00000025235) #17 H2AC21 (ENSPPAG00000019861) H2AC20 (ENSPPAG00000022736) H2BC21 (ENSPPAG00000025024) H3-7 (ENSPPAG00000023295) #22 H2BC18 (ENSPPAG00000020072) #23 FCGR1A (ENSPPAG00000039866) #24 ENSPPAG00000036804 ENSPPAG00000032403 ENSPPAG00000034850 ENSPPAG00000029215 ENSPPAG00000020771 ENSPPAG00000028256 ENSPPAG00000042737 ENSPPAG00000028949 ENSPPAG00000028195 ENSPPAG00000033138 ENSPPAG00000033589 ENSPPAG00000027857 GSTM1 (ENSPPAG00000034147) Bonobo MODERN SPECIES 213 ENSPPAG00000032850 #20 ENSPPAG00000010106 #18 ENSPPAG00000035334 ENSPPAG00000035234 ENSPPAG00000032669 #22 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 319 H3C13 (ENSPTRG00000049585) #20 H2AC19 (ENSPTRG00000046303) #18 ENSPTRG00000047237 ENSPTRG00000046524 ENSPTRG00000044548 #18 H3C13 (ENSPTRG00000044724) #22 Chimpanzee MODERN SPECIES C1H1orf54 (ENSPTRG00000001251) APH1A (ENSPTRG00000001250) #7 CA14 (ENSPTRG00000001249) #8 ANP32E (ENSPTRG00000046939) #9 PLEKHO1 (ENSPTRG00000001247) #11 VPS45 (ENSPTRG00000001246) #12 OTUD7B (ENSPTRG00000001245) #13 MTMR11 (ENSPTRG00000001244) #14 SF3B4 (ENSPTRG00000001243) #15 SV2A (ENSPTRG00000001242) #16 BOLA1 (ENSPTRG00000001241) #17 H2AC21 (ENSPTRG00000047219) H2AC20 (ENSPTRG00000052021) H2BC21 (ENSPTRG00000050454) H4C6 (ENSPTRG00000001238) #21 H3C13 (ENSPTRG00000044185) #22 H2BC18 (ENSPTRG00000047357) #23 FCGR1A (ENSPTRG00000001233) #24 ENSPTRG00000051267 ENSPTRG00000046494 ENSPTRG00000047652 ENSPTRG00000047567 ENSPTRG00000023855 ENSPTRG00000046020 ENSPTRG00000050992 ENSPTRG00000030794 ENSPTRG00000051930 ENSPTRG00000045351 ENSPTRG00000050199 ENSPTRG00000030424 GSTM1 (ENSPTRG00000001061) Gibbon DUPLICATION Gibbon MODERN SPECIES 2 ACP6 (ENSNLEG00000000233) GJA5 (ENSNLEG00000034607) ENSNLEG00000031342 GJA8 (ENSNLEG00000000252) ENSNLEG00000029979 ENSNLEG00000031320 ENSNLEG00000033725 ENSNLEG00000034293 ENSNLEG00000035986 ENSNLEG00000033645 ENSNLEG00000009671 #24 H2BC18 (ENSNLEG00000030888) #23 H3-7 (ENSNLEG00000034204) #22 H4C15 (ENSNLEG00000027152) ##21 ENSNLEG00000027903 #18 ENSNLEG00000034350 #22 H2BC21 (ENSNLEG00000034437) H2AC20 (ENSNLEG00000031795) SV2A (ENSNLEG00000009675) #16 ENSNLEG00000009693 #15 MTMR11 (ENSNLEG00000009701) #14 OTUD7B (ENSNLEG00000009731) #13 VPS45 (ENSNLEG00000009742) #12 ENSNLEG00000009769 #11 ANP32E (ENSNLEG00000032790) #9 CA14 (ENSNLEG00000009787) #8 C1orf54 (ENSNLEG00000009825) APH1A (ENSNLEG00000009799) #7 CIART (ENSNLEG00000009830) MRPS21 (ENSNLEG00000031023) PRPF3 (ENSNLEG00000009841) Gibbon MODERN SPECIES 2 APH1A (ENSNLEG00000009799) #7 C1orf54 (ENSNLEG00000009825) CA14 (ENSNLEG00000009787) #8 ANP32E (ENSNLEG00000032790) #9 ENSNLEG00000009769 #11 VPS45 (ENSNLEG00000009742) #12 OTUD7B (ENSNLEG00000009731) #13 MTMR11 (ENSNLEG00000009701) #14 ENSNLEG00000009693 #15 SV2A (ENSNLEG00000009675) #16 H2AC20 (ENSNLEG00000031795) H2BC21 (ENSNLEG00000034437) ENSNLEG00000034350 #22 ENSNLEG00000027903 #18 H4C15 (ENSNLEG00000027152) ##21 H3-7 (ENSNLEG00000034204) #22 H2BC18 (ENSNLEG00000030888) #23 ENSNLEG00000009671 #24 ENSNLEG00000033645 ENSNLEG00000035986 ENSNLEG00000034293 ENSNLEG00000033725 ENSNLEG00000031320 ENSNLEG00000029979 GJA8 (ENSNLEG00000000252) ENSNLEG00000031342 GJA5 (ENSNLEG00000034607) ACP6 (ENSNLEG00000000233) BCL9 (ENSNLEG00000000223) ENSNLEG00000030334 CHD1L (ENSNLEG00000000179) Euarchontoglires DUPLICATION Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.a ##22 Glires ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00530000063074.a ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT00910000145379.c ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 Myomorpha ANCESTRAL SPECIES 12 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 Muroidea ANCESTRAL SPECIES 118 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 Muroidea_A ANCESTRAL SPECIES 64 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 Murinae ANCESTRAL SPECIES 5 ENSGT00530000063074.a ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT00940000165934 #31 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a.u #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 Mus ANCESTRAL SPECIES 7 ENSGT00940000158423.c #37 ENSGT00390000014273.b #36 ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT00940000165934 #31 ENSGT00860000135842 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a.u #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 Mus_A ANCESTRAL SPECIES 9 ENSGT00530000063074.a ENSGT00940000158423.c #37 ENSGT00390000014273.b #36 ENSGT00730000111185.n.a #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT00940000165934 #31 ENSGT00860000135842 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.A.f.e #22 ENSGT01060000248528.b.kh.yb.a.b ##21 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.d.a.a ##22 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT00940000153092.a.a.d.f.a ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a.u #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 Mus_B ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.a ##22 Mouse MODERN SPECIES 12 Car14 (ENSMUSG00000038526) #8 Anp32e (ENSMUSG00000015749) #9 Plekho1 (ENSMUSG00000015745) #11 Vps45 (ENSMUSG00000015747) #12 Otud7b (ENSMUSG00000038495) #13 Mtmr11 (ENSMUSG00000045934) #14 Sf3b4 (ENSMUSG00000068856) #15 Sv2a (ENSMUSG00000038486) #16 Bola1 (ENSMUSG00000015943) #17 H2ac21 (ENSMUSG00000063689) H2ac20 (ENSMUSG00000068855) H2bc21 (ENSMUSG00000068854) ##23 H3c15 (ENSMUSG00000081058) #22 H2ac19 (ENSMUSG00000063954) #18 H2ac18 (ENSMUSG00000064220) #18 H3c14 (ENSMUSG00000093769) ##22 H4c14 (ENSMUSG00000091405) ##21 H3c13 (ENSMUSG00000074403) ##22 H2bc18 (ENSMUSG00000105827) #23 Fcgr1 (ENSMUSG00000015947) #24 Hjv (ENSMUSG00000038403) #28 Txnip (ENSMUSG00000038393) #30 Gm16253 (ENSMUSG00000087610) Polr3gl (ENSMUSG00000028104) #31 Ankrd34a (ENSMUSG00000049097) #33 Lix1l (ENSMUSG00000049288) #34 Rbm8a (ENSMUSG00000038374) #35 Pex11b (ENSMUSG00000028102) #36 Itga10 (ENSMUSG00000090210) #37 Ankrd35 (ENSMUSG00000038354) Pias3 (ENSMUSG00000028101) Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.xb.b.b ##21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT00940000153125.E.c.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153125.A ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT00940000162956 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT00940000153125.D.a.b ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 ENSGT00940000153125.C ENSGT00940000160281 ENSGT00940000153104.e.b.a.b ENSGT00940000162941 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153092.a.b.f Primates ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Cebidae ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Capuchin MODERN SPECIES 188 CA14 (ENSCCAG00000023681) #8 ENSCCAG00000020910 PLEKHO1 (ENSCCAG00000033185) #11 VPS45 (ENSCCAG00000037065) #12 OTUD7B (ENSCCAG00000036948) #13 MTMR11 (ENSCCAG00000035057) #14 ENSCCAG00000021751 #15 SV2A (ENSCCAG00000035849) #16 H2AC21 (ENSCCAG00000020094) H2AC20 (ENSCCAG00000005773) H2BC21 (ENSCCAG00000020545) ENSCCAG00000034681 ENSCCAG00000000823 #22 ENSCCAG00000026615 #18 H2AC18 (ENSCCAG00000020282) #18 ENSCCAG00000013177 ##22 ENSCCAG00000029951 H2BC18 (ENSCCAG00000036311) #23 ENSCCAG00000036223 #24 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Glires ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.s ##23 ENSGT00940000153125.E.c.b ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000162950 ENSGT01020000230360.c.b.a.b.b.d ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Rodentia_B ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.a.b ##22 Muroidea ANCESTRAL SPECIES 6 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##23 ENSGT01100000263506.a.e.a.a.a.b.b.b ##23 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01060000248528.b.kh.xb.b.b ##21 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Muroidea_A ANCESTRAL SPECIES 90 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 Murinae ANCESTRAL SPECIES 21 ENSGT00940000155501.a.b ENSGT01100000263514.A.f ENSGT00940000155501.a.a ENSGT00940000162950.d ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263506.a.f.b.p.a ##23 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.b ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 ENSGT00940000153717.a.a ENSGT00530000068834 ENSGT00940000153270.a Mus ANCESTRAL SPECIES 18 ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263506.a.f.b.p.a ##23 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000153092.a.a.c.a.a.g ENSGT00940000155501.a.a ENSGT01100000263514.A.f ENSGT00940000155501.a.b ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263506.a.f.b.p.b ##23 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT00940000162950.d ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.a.a.b ##21 Mus_A ANCESTRAL SPECIES 7 ENSGT01030000234599.a.b ENSGT00940000155774.b ENSGT00950000182961.a.b.a.b ENSGT00950000182961.a.b.a.a ENSGT00940000160320 ENSGT00530000063694.b ENSGT01050000244814.a.a.a.b ENSGT00940000163122 ENSGT00950000182696.A.a ENSGT00940000155964 ENSGT00940000155357.q.a ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT00940000153118.db.a.a.a ENSGT01100000263795 ENSGT00390000013440 ENSGT00390000003800 ENSGT01030000234601.c.a.b ENSGT00390000003753.b ENSGT00930000151058 ENSGT00390000006233.c.a.b ENSGT00390000013260.C ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 Mus_B ANCESTRAL SPECIES 13 ENSGT01030000234553.b.b.c.b.a.a.b.a.a.a.a.a.b.b.a ENSGT01030000234553.b.b.c.b.a.a.b.a.a.a.a.b.a.a.b.b ENSGT01030000234553.b.b.c.b.b.c.b.a.a ENSGT00940000162956 ENSGT00390000002062 ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000155501.a.b ENSGT01100000263559.A.f.e #22 ENSGT00940000156302 #18 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000163525 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263506.a.f.b.p.a ##23 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.b ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B Mouse MODERN SPECIES 12 Plekho1 (ENSMUSG00000015745) #11 Vps45 (ENSMUSG00000015747) #12 Otud7b (ENSMUSG00000038495) #13 Mtmr11 (ENSMUSG00000045934) #14 Sf3b4 (ENSMUSG00000068856) #15 Sv2a (ENSMUSG00000038486) #16 Bola1 (ENSMUSG00000015943) #17 H2ac21 (ENSMUSG00000063689) H2ac20 (ENSMUSG00000068855) H2bc21 (ENSMUSG00000068854) ##23 H3c15 (ENSMUSG00000081058) #22 H2ac19 (ENSMUSG00000063954) #18 H2ac18 (ENSMUSG00000064220) #18 H3c14 (ENSMUSG00000093769) ##22 H4c14 (ENSMUSG00000091405) ##21 H3c13 (ENSMUSG00000074403) ##22 H2bc18 (ENSMUSG00000105827) #23 Fcgr1 (ENSMUSG00000015947) #24 Hjv (ENSMUSG00000038403) #28 Txnip (ENSMUSG00000038393) #30 Gm16253 (ENSMUSG00000087610) Polr3gl (ENSMUSG00000028104) #31 Ankrd34a (ENSMUSG00000049097) #33 Lix1l (ENSMUSG00000049288) #34 Rbm8a (ENSMUSG00000038374) #35 Pex11b (ENSMUSG00000028102) #36 Itga10 (ENSMUSG00000090210) #37 Ankrd35 (ENSMUSG00000038354) Pias3 (ENSMUSG00000028101) Nudt17 (ENSMUSG00000028100) Polr3c (ENSMUSG00000028099) Shrew mouse MODERN SPECIES 7 Scgn (MGP_PahariEiJ_G0019410) H2ac1 (MGP_PahariEiJ_G0019409) H2bc1 (MGP_PahariEiJ_G0019408) Slc17a4 (MGP_PahariEiJ_G0019407) Slc17a1 (MGP_PahariEiJ_G0019406) Slc17a3 (MGP_PahariEiJ_G0019405) Slc17a2 (MGP_PahariEiJ_G0019404) Trim38 (MGP_PahariEiJ_G0019403) H1f1 (MGP_PahariEiJ_G0019402) MGP_PahariEiJ_G0019401 MGP_PahariEiJ_G0019400 ##21 MGP_PahariEiJ_G0019399 #21 MGP_PahariEiJ_G0019398 #20 MGP_PahariEiJ_G0019397 H2bc3 (MGP_PahariEiJ_G0019396) ##23 MGP_PahariEiJ_G0019395 ##22 H1f2 (MGP_PahariEiJ_G0019394) Hfe (MGP_PahariEiJ_G0019393) MGP_PahariEiJ_G0019392 #21 H1f6 (MGP_PahariEiJ_G0019391) MGP_PahariEiJ_G0019390 ##23 H1f4 (MGP_PahariEiJ_G0019389) MGP_PahariEiJ_G0019388 ##23 MGP_PahariEiJ_G0019387 #21 MGP_PahariEiJ_G0019386 MGP_PahariEiJ_G0019385 MGP_PahariEiJ_G0019384 ##22 MGP_PahariEiJ_G0019383 #20 H1f3 (MGP_PahariEiJ_G0019382) MGP_PahariEiJ_G0019381 #21 MGP_PahariEiJ_G0019380 Euarchontoglires ANCESTRAL SPECIES 72 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 ENSGT01060000248528.b.jh.a.a.b ##21 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT01060000248528.b.kh.xb.b.a ##21 ENSGT00940000162723 ENSGT00940000158017 ENSGT00940000161530 ENSGT00950000182802.B.a.a.b ENSGT00390000002062 ENSGT00940000162956 ENSGT01030000234553.b.b.c.b.a Glires ANCESTRAL SPECIES 75 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Rodentia ANCESTRAL SPECIES 75 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Rodentia_B ANCESTRAL SPECIES 113 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Myomorpha ANCESTRAL SPECIES 127 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Muroidea ANCESTRAL SPECIES 149 ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000159644.t ENSGT00940000163016 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644.s ENSGT00860000135624 ENSGT00940000161576 ENSGT00940000163486 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a ENSGT01100000263486.a.b.a.b.a ENSGT01100000263486.a.b.b ENSGT01100000263548.a.b.b.ob ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b.nb.a ENSGT00940000153092.a.a.d ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000164849 ENSGT00940000153253.b.a.h ENSGT00940000160281 ENSGT00390000002062 ENSGT00940000161530 ENSGT00940000158017 ENSGT01060000248528.b.jh.a.a.b ##21 ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.o.b ##23 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.f.b.p.b ##23 ENSGT00940000155501.a.a Murinae ANCESTRAL SPECIES 21 ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263506.a.f.b.p.a ##23 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000162950.d ENSGT00940000155501.a.a ENSGT01100000263514.A.f ENSGT00940000155501.a.b ENSGT01060000248528.b.jh.a.a.a ##21 ENSGT01100000263506.a.f.b.o ##23 ENSGT01060000248528.b.jh.a.a.b ##21 Mus ANCESTRAL SPECIES 18 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.f.b.p.b ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT00940000155501.a.b ENSGT01100000263514.A.f ENSGT00940000155501.a.a ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.b #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01100000263506.a.f.b.p.a ##23 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.b ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 ENSGT00940000153717.a.a ENSGT00530000068834 ENSGT00940000153270.a Mus_A ANCESTRAL SPECIES 14 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263506.a.f.b.p.a ##23 ENSGT00940000153092.a.a.d.e.b ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.jh.a.a.a ##21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000155501.a.a ENSGT01100000263514.A.f ENSGT00940000155501.a.b ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263506.a.f.b.p.b ##23 ENSGT01060000248528.b.kh.yb.a.a ##21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263559.B #20 ENSGT01060000248528.b.jh.a.a.b ##21 Ryukyu mouse MODERN SPECIES 4 Zscan26 (MGP_CAROLIEiJ_G0018271) Nkapl (MGP_CAROLIEiJ_G0018272) MGP_CAROLIEiJ_G0018273 Zkscan4 (MGP_CAROLIEiJ_G0018274) Zkscan8 (MGP_CAROLIEiJ_G0018275) MGP_CAROLIEiJ_G0018276 MGP_CAROLIEiJ_G0018277 Or2w2 (MGP_CAROLIEiJ_G0018278) Or2w4 (MGP_CAROLIEiJ_G0018279) Or2b6 (MGP_CAROLIEiJ_G0018280) Or2w6 (MGP_CAROLIEiJ_G0018281) MGP_CAROLIEiJ_G0018282 MGP_CAROLIEiJ_G0018283 MGP_CAROLIEiJ_G0018284 ##23 MGP_CAROLIEiJ_G0018285 MGP_CAROLIEiJ_G0018286 ##22 MGP_CAROLIEiJ_G0018287 ##23 MGP_CAROLIEiJ_G0018288 ##23 MGP_CAROLIEiJ_G0018289 ##23 MGP_CAROLIEiJ_G0018290 ##21 MGP_CAROLIEiJ_G0018291 #21 H1f5 (MGP_CAROLIEiJ_G0018292) MGP_CAROLIEiJ_G0018293 Zfp184 (MGP_CAROLIEiJ_G0018294) Pom121l2 (MGP_CAROLIEiJ_G0018295) Prss16 (MGP_CAROLIEiJ_G0018296) MGP_CAROLIEiJ_G0018297 ##21 MGP_CAROLIEiJ_G0018298 #21 MGP_CAROLIEiJ_G0018299 #21 MGP_CAROLIEiJ_G0018300 Vmn1r191 (MGP_CAROLIEiJ_G0018301) Mus_B ANCESTRAL SPECIES 13 ENSGT00530000068834 ENSGT00940000153717.a.a ENSGT00390000010830 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00940000161385 ENSGT01100000263474.a.a.c.b ENSGT00940000160894 ENSGT00940000162346 ENSGT00940000162523 ENSGT00940000161926 ENSGT00940000160468 ENSGT00940000163269 ENSGT01100000263514.A.e.a.b.a.a.c.b ENSGT01100000263506.a.f.b.p.a ##23 ENSGT01100000263559.A.f.d.b ##22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01100000263559.A.f.d.a.b ##22 ENSGT01060000248528.b.jh.a.b ##21 ENSGT00940000163525 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000155501.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.p ##23 ENSGT00940000156302 #18 ENSGT01100000263559.A.f.e #22 ENSGT00940000155501.a.b ENSGT00940000158017 ENSGT00940000161530 ENSGT00390000002062 ENSGT00940000162956 Mouse MODERN SPECIES 4 Scgn (ENSMUSG00000021337) H2ac1 (ENSMUSG00000060081) H2bc1 (ENSMUSG00000050799) Slc17a4 (ENSMUSG00000021336) Slc17a1 (ENSMUSG00000021335) Slc17a3 (ENSMUSG00000036083) Slc17a2 (ENSMUSG00000036110) Trim38 (ENSMUSG00000064140) H1f1 (ENSMUSG00000049539) H3c1 (ENSMUSG00000069265) H4c1 (ENSMUSG00000060093) #21 H4c2 (ENSMUSG00000069266) ##21 H3c2 (ENSMUSG00000069267) #20 H2ac4 (ENSMUSG00000061615) H2bc3 (ENSMUSG00000075031) ##23 H3c3 (ENSMUSG00000069310) ##22 H1f2 (ENSMUSG00000036181) Hfe (ENSMUSG00000006611) H4c3 (ENSMUSG00000060678) ##21 H1f6 (ENSMUSG00000036211) H2bc4 (ENSMUSG00000018102) ##23 H2ac6 (ENSMUSG00000069270) H1f4 (ENSMUSG00000051627) H2bc6 (ENSMUSG00000047246) ##23 H4c4 (ENSMUSG00000061482) #21 H3c4 (ENSMUSG00000099583) #20 H2ac7 (ENSMUSG00000071478) H2bc7 (ENSMUSG00000069268) ##23 H2bc8 (ENSMUSG00000058385) ##23 H2ac8 (ENSMUSG00000069272) H3c6 (ENSMUSG00000069273) #20 Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019399 #21 MGP_PahariEiJ_G0019398 #20 MGP_PahariEiJ_G0019397 H2bc3 (MGP_PahariEiJ_G0019396) ##23 MGP_PahariEiJ_G0019395 ##22 H1f2 (MGP_PahariEiJ_G0019394) Hfe (MGP_PahariEiJ_G0019393) MGP_PahariEiJ_G0019392 #21 H1f6 (MGP_PahariEiJ_G0019391) MGP_PahariEiJ_G0019390 ##23 H1f4 (MGP_PahariEiJ_G0019389) MGP_PahariEiJ_G0019388 ##23 MGP_PahariEiJ_G0019387 #21 MGP_PahariEiJ_G0019386 MGP_PahariEiJ_G0019385 MGP_PahariEiJ_G0019384 ##22 MGP_PahariEiJ_G0019383 #20 H1f3 (MGP_PahariEiJ_G0019382) MGP_PahariEiJ_G0019381 #21 MGP_PahariEiJ_G0019380 MGP_PahariEiJ_G0019379 ##21 Btn2a2 (MGP_PahariEiJ_G0019378) Btn1a1 (MGP_PahariEiJ_G0019377) Abt1 (MGP_PahariEiJ_G0019376) Zfp322a (MGP_PahariEiJ_G0019375) Vmn1r223 (MGP_PahariEiJ_G0019374) MGP_PahariEiJ_G0019373 MGP_PahariEiJ_G0019372 MGP_PahariEiJ_G0019371 MGP_PahariEiJ_G0019370 MGP_PahariEiJ_G0019369 Rat MODERN SPECIES 8 LOC120097726 (ENSRNOG00000069245) Hist1h3b (ENSRNOG00000068516) LOC100910200 (ENSRNOG00000064011) ##23 LOC102548682 (ENSRNOG00000064521) ##22 hist1h2ail2 (ENSRNOG00000067434) H4f3 (ENSRNOG00000048264) Hist1h4m (ENSRNOG00000070513) ##21 H1f4 (ENSRNOG00000047459) AC130391.3 (ENSRNOG00000053025) Hist1h2bq (ENSRNOG00000069578) ##23 H1f6 (ENSRNOG00000061863) Hist1h4m (ENSRNOG00000070706) ##21 Hfe (ENSRNOG00000016967) H1f2 (ENSRNOG00000067441) Hist1h2af (ENSRNOG00000022146) H3c13 (ENSRNOG00000065054) ##22 LOC102549173 (ENSRNOG00000066835) ##22 Hist1h4m (ENSRNOG00000065263) ##21 Hist1h3b (ENSRNOG00000068614) H1f1 (ENSRNOG00000017175) Slc17a2 (ENSRNOG00000017180) Slc17a3 (ENSRNOG00000032745) AABR07027750.1 (ENSRNOG00000042692) Slc17a4 (ENSRNOG00000022505) H2bc1 (ENSRNOG00000069905) H2ac1 (ENSRNOG00000065352) Scgn (ENSRNOG00000016628) Carmil1 (ENSRNOG00000016576) ENSRNOG00000064118 ENSRNOG00000067245 Cmahp (ENSRNOG00000003094) Rodentia_A ANCESTRAL SPECIES ENSGT01100000263559.A.f.d.b ##22 Hystricomorpha ANCESTRAL SPECIES 42 ENSGT01050000244828.c.b.b.a.a.b ENSGT01090000260018.D.d.b ENSGT00940000162956 ENSGT00390000002062 ENSGT00950000182802.B.a.a.b ENSGT00940000161530 ENSGT00940000158017 ENSGT00940000155501.a.a ENSGT00940000153125.F.g ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000163269 ENSGT00940000160468.e.b ENSGT00940000160468.e.a.b ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 ENSGT00940000153717.a.a ENSGT00530000068834 Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT01050000244828.c.b.b.a.a.b ENSGT01090000260018.D.d.b ENSGT00940000162956 ENSGT00390000002062 ENSGT00940000161530 ENSGT00940000158017 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000163269 ENSGT00940000160468.e.b ENSGT00940000160468.e.a.b ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a ENSGT00940000161385 ENSGT00950000183108.a ENSGT00940000155112.B ENSGT00390000010830 ENSGT00940000153717.a.a ENSGT00530000068834 Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f.d.b ##22 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.s ##23 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000162950 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT01060000248528.b.kh.yb.b #21 ENSGT00940000153118.db.a.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000163269 ENSGT00940000160468.e.b ENSGT00940000160468.e.a.b ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a Degu MODERN SPECIES 160 SLC17A1 (ENSODEG00000014265) SLC17A3 (ENSODEG00000013677) SLC17A2 (ENSODEG00000013372) ENSODEG00000020246 ENSODEG00000020110 H1-1 (ENSODEG00000020218) ENSODEG00000013990 #20 HFE (ENSODEG00000015440) ENSODEG00000013476 ##23 ENSODEG00000013294 ENSODEG00000015259 #21 ENSODEG00000013335 #21 ENSODEG00000013815 #21 ENSODEG00000013885 #22 ENSODEG00000013667 #20 ENSODEG00000013504 ##22 ENSODEG00000015343 #21 ENSODEG00000014935 ENSODEG00000020041 BTN2A2 (ENSODEG00000013492) BTN1A1 (ENSODEG00000013656) ABT1 (ENSODEG00000014676) ENSODEG00000012485 ENSODEG00000012723 ENSODEG00000013745 OR14J1 (ENSODEG00000020074) Guinea pig MODERN SPECIES 38 OR14J1 (ENSCPOG00000011597) ENSCPOG00000009070 ZNF322 (ENSCPOG00000001020) ABT1 (ENSCPOG00000035744) BTN1A1 (ENSCPOG00000031494) BTN2A2 (ENSCPOG00000001363) ENSCPOG00000039303 ENSCPOG00000036966 #21 ENSCPOG00000040673 ##23 ENSCPOG00000033212 ENSCPOG00000038998 ENSCPOG00000039392 ##22 ENSCPOG00000030495 #21 ENSCPOG00000040045 ENSCPOG00000030992 ##23 ENSCPOG00000031052 ##23 H2BC6 (ENSCPOG00000033590) ##23 ENSCPOG00000038987 ##23 ENSCPOG00000007747 HFE (ENSCPOG00000031763) H1-2 (ENSCPOG00000005522) H2BC3 (ENSCPOG00000032375) ENSCPOG00000036445 ENSCPOG00000032921 #21 ENSCPOG00000038477 #21 ENSCPOG00000031982 H1-1 (ENSCPOG00000012027) Laurasiatheria ANCESTRAL SPECIES ENSGT01100000263506.a.e.a.a.b.a ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.A ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Eulipotyphla ANCESTRAL SPECIES ENSGT01100000263559.A.f #22 Common shrew MODERN SPECIES 7832 ENSSARG00000010332 #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT01030000234553.b.b.c.b.b ENSGT00940000162956 ENSGT01090000259995.b.a.a.a.a.b ENSGT00390000002062 ENSGT00950000182802.B.a.a.b ENSGT00940000161530 ENSGT01060000248528.b.kh.xb.a.b ##21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##23 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##23 ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01060000248528.b.kh.yb.d #21 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 Carnivora ANCESTRAL SPECIES 1 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Felidae ANCESTRAL SPECIES 44 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01060000248528.b.kh.xb.a.a ##21 Panthera ANCESTRAL SPECIES 40 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f Panthera_a ANCESTRAL SPECIES 79 ENSGT01100000263504.a.b.b.b.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f lion MODERN SPECIES 258 ENSPLOG00000019966 ##21 H3-7 (ENSPLOG00000019985) #22 H2BC18 (ENSPLOG00000020001) #23 FCGR1A (ENSPLOG00000020037) #24 ENSPLOG00000020126 ENSPLOG00000020136 ENSPLOG00000020168 Cat DUPLICATION Cat MODERN SPECIES 239 PRPF3 (ENSFCAG00000013940) ENSFCAG00000034082 CIART (ENSFCAG00000013937) CC1H1orf54 (ENSFCAG00000013939) CA14 (ENSFCAG00000013934) #8 APH1A (ENSFCAG00000030589) #7 ANP32E (ENSFCAG00000022278) #9 PLEKHO1 (ENSFCAG00000035563) #11 VPS45 (ENSFCAG00000010112) #12 OTUD7B (ENSFCAG00000010110) #13 MTMR11 (ENSFCAG00000010108) #14 SF3B4 (ENSFCAG00000010106) #15 ENSFCAG00000051403 SV2A (ENSFCAG00000010104) #16 H2BC19 (ENSFCAG00000044074) ##23 ENSFCAG00000047792 #22 H4C14 (ENSFCAG00000023368) ##21 H3C13 (ENSFCAG00000045408) #22 H2BC18 (ENSFCAG00000046241) #23 FCGR1A (ENSFCAG00000027331) #24 ENSFCAG00000044482 ENSFCAG00000025610 ENSFCAG00000031642 HJV (ENSFCAG00000043881) #28 TXNIP (ENSFCAG00000029919) #30 POLR3GL (ENSFCAG00000005410) ANKRD34A (ENSFCAG00000002723) #33 LIX1L (ENSFCAG00000033679) #34 RBM8A (ENSFCAG00000033936) #35 PEX11B (ENSFCAG00000030808) #36 ITGA10 (ENSFCAG00000005415) #37 Cat MODERN SPECIES 239 CIART (ENSFCAG00000013937) CC1H1orf54 (ENSFCAG00000013939) CA14 (ENSFCAG00000013934) #8 APH1A (ENSFCAG00000030589) #7 ANP32E (ENSFCAG00000022278) #9 PLEKHO1 (ENSFCAG00000035563) #11 VPS45 (ENSFCAG00000010112) #12 OTUD7B (ENSFCAG00000010110) #13 MTMR11 (ENSFCAG00000010108) #14 SF3B4 (ENSFCAG00000010106) #15 ENSFCAG00000051403 SV2A (ENSFCAG00000010104) #16 H2BC19 (ENSFCAG00000044074) ##23 ENSFCAG00000047792 #22 H4C14 (ENSFCAG00000023368) ##21 H3C13 (ENSFCAG00000045408) #22 H2BC18 (ENSFCAG00000046241) #23 FCGR1A (ENSFCAG00000027331) #24 ENSFCAG00000044482 ENSFCAG00000025610 ENSFCAG00000031642 HJV (ENSFCAG00000043881) #28 TXNIP (ENSFCAG00000029919) #30 POLR3GL (ENSFCAG00000005410) ANKRD34A (ENSFCAG00000002723) #33 LIX1L (ENSFCAG00000033679) #34 RBM8A (ENSFCAG00000033936) #35 PEX11B (ENSFCAG00000030808) #36 ITGA10 (ENSFCAG00000005415) #37 ANKRD35 (ENSFCAG00000005416) PIAS3 (ENSFCAG00000031238) Caniformia ANCESTRAL SPECIES 31 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263559.A.f #22 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263559.B #20 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 Canidae ANCESTRAL SPECIES 18 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01100000263883 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00910000145379 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Red fox MODERN SPECIES 176 CIART (ENSVVUG00000007857) APH1A (ENSVVUG00000007850) #7 CA14 (ENSVVUG00000007843) #8 ENSVVUG00000007839 #9 PLEKHO1 (ENSVVUG00000007828) #11 VPS45 (ENSVVUG00000007786) #12 OTUD7B (ENSVVUG00000007773) #13 MTMR11 (ENSVVUG00000007745) #14 ENSVVUG00000007732 #15 SV2A (ENSVVUG00000007726) #16 BOLA1 (ENSVVUG00000007718) #17 H2AC21 (ENSVVUG00000007714) H2AC20 (ENSVVUG00000007707) H2BC21 (ENSVVUG00000007671) ENSVVUG00000007660 #21 H3-7 (ENSVVUG00000007640) #22 H2BC18 (ENSVVUG00000007606) #23 ENSVVUG00000007601 ENSVVUG00000007595 ENSVVUG00000007591 FCGR1A (ENSVVUG00000007556) #24 ENSVVUG00000007552 HJV (ENSVVUG00000007529) #28 TXNIP (ENSVVUG00000007524) #30 POLR3GL (ENSVVUG00000007497) ANKRD34A (ENSVVUG00000007494) #33 LIX1L (ENSVVUG00000007490) #34 RBM8A (ENSVVUG00000007486) #35 PEX11B (ENSVVUG00000007477) #36 ITGA10 (ENSVVUG00000007459) #37 ANKRD35 (ENSVVUG00000007450) Caniformia_b ANCESTRAL SPECIES 35 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.B #20 ENSGT01060000248528.b.jh.a.b ##21 ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Mustelinae ANCESTRAL SPECIES 255 ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 American mink DUPLICATION American mink MODERN SPECIES 530 ENSNVIG00000003483 ENSNVIG00000003455 ENSNVIG00000003436 ENSNVIG00000003430 #24 H2BC18 (ENSNVIG00000003417) #23 ENSNVIG00000003413 #20 H4 (ENSNVIG00000003408) #21 ENSNVIG00000003399 #22 ENSNVIG00000003397 #18 ENSNVIG00000003349 ENSNVIG00000003286 ENSNVIG00000003279 #18 ENSNVIG00000003275 #22 ENSNVIG00000003258 H2AC20 (ENSNVIG00000003252) H2AC21 (ENSNVIG00000003251) BOLA1 (ENSNVIG00000003246) #17 SV2A (ENSNVIG00000003188) #16 SF3B4 (ENSNVIG00000003168) #15 MTMR11 (ENSNVIG00000003067) #14 OTUD7B (ENSNVIG00000003037) #13 VPS45 (ENSNVIG00000002966) #12 PLEKHO1 (ENSNVIG00000002956) #11 ENSNVIG00000002941 #9 American mink MODERN SPECIES 530 PLEKHO1 (ENSNVIG00000002956) #11 VPS45 (ENSNVIG00000002966) #12 OTUD7B (ENSNVIG00000003037) #13 MTMR11 (ENSNVIG00000003067) #14 SF3B4 (ENSNVIG00000003168) #15 SV2A (ENSNVIG00000003188) #16 BOLA1 (ENSNVIG00000003246) #17 H2AC21 (ENSNVIG00000003251) H2AC20 (ENSNVIG00000003252) ENSNVIG00000003258 ENSNVIG00000003275 #22 ENSNVIG00000003279 #18 ENSNVIG00000003286 ENSNVIG00000003349 ENSNVIG00000003397 #18 ENSNVIG00000003399 #22 H4 (ENSNVIG00000003408) #21 ENSNVIG00000003413 #20 H2BC18 (ENSNVIG00000003417) #23 ENSNVIG00000003430 #24 ENSNVIG00000003436 ENSNVIG00000003455 ENSNVIG00000003483 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.b ##23 ENSGT01100000263559.B #20 ENSGT01100000263575.A ENSGT00940000156302 #18 ENSGT01100000263575.B.u ENSGT00940000153125.D.a.a ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Equus ANCESTRAL SPECIES 3 ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263559.B #20 ENSGT01100000263514.A.e.a.a ENSGT00940000155501.a.b ENSGT01060000248528.b.kh.yb.d #21 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263567.a.a ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT01060000248528.b.jh.a.b ##21 ENSGT00940000163036.g.a.a.a ENSGT01100000263575.A ENSGT00940000156302 #18 ENSGT01100000263575.B.u ENSGT00940000153092.a.b.e.a.a ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Horse MODERN SPECIES 26 ANP32E (ENSECAG00000008718) #9 ENSECAG00000057654 ENSECAG00000044747 PLEKHO1 (ENSECAG00000059570) #11 VPS45 (ENSECAG00000013816) #12 OTUD7B (ENSECAG00000019449) #13 MTMR11 (ENSECAG00000023282) #14 SV2A (ENSECAG00000007414) #16 BOLA1 (ENSECAG00000034826) #17 H2AC20 (ENSECAG00000049520) H2BC20 (ENSECAG00000060054) ENSECAG00000054279 H2AC19 (ENSECAG00000043631) #18 H2BC20 (ENSECAG00000053797) H2BC19 (ENSECAG00000043501) ENSECAG00000046705 #22 H2BC18 (ENSECAG00000044618) #23 ENSECAG00000037030 #24 ENSECAG00000014464 #24 ENSECAG00000013628 ENSECAG00000013941 ENSECAG00000037385 #24 POLR3GL (ENSECAG00000015900) HJV (ENSECAG00000028996) #28 TXNIP (ENSECAG00000028144) #30 ANKRD34A (ENSECAG00000002458) #33 LIX1L (ENSECAG00000020654) #34 ENSECAG00000046198 RBM8A (ENSECAG00000022024) #35 GNRHR2 (ENSECAG00000023497) PEX11B (ENSECAG00000002265) #36 Chiroptera ANCESTRAL SPECIES 20 ENSGT01060000248528.b.kh.yb.d #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u ENSGT00940000153125.E.c.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000153125.E.c.a.b.b ENSGT00940000162950 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.kh.yb.c.a #21 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000153125.E.c.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.b ##23 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01060000248528.b.jh.b ##21 ENSGT01060000248528.b.kh.yb.d #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 14 CA14 (ENSRFEG00010020216) #8 ANP32E (ENSRFEG00010020103) #9 PLEKHO1 (ENSRFEG00010020048) #11 VPS45 (ENSRFEG00010019952) #12 OTUD7B (ENSRFEG00010019911) #13 MTMR11 (ENSRFEG00010019669) #14 SF3B4 (ENSRFEG00010019596) #15 SV2A (ENSRFEG00010019515) #16 BOLA1 (ENSRFEG00010019489) #17 ENSRFEG00010019479 H2AC21 (ENSRFEG00010019466) H2AC20 (ENSRFEG00010019447) ENSRFEG00010019413 ##23 ENSRFEG00010019403 ENSRFEG00010019396 #18 ENSRFEG00010019380 #22 ENSRFEG00010019363 #21 ENSRFEG00010019351 ##21 ENSRFEG00010019339 #22 H2BC18 (ENSRFEG00010019313) #23 FCGR1A (ENSRFEG00010019271) #24 HJV (ENSRFEG00010019205) #28 TXNIP (ENSRFEG00010019128) #30 POLR3GL (ENSRFEG00010019091) ANKRD34A (ENSRFEG00010019075) #33 LIX1L (ENSRFEG00010019031) #34 RBM8A (ENSRFEG00010018987) #35 PEX11B (ENSRFEG00010018908) #36 ITGA10 (ENSRFEG00010018433) #37 ANKRD35 (ENSRFEG00010018199) PIAS3 (ENSRFEG00010018138) Greater horseshoe bat MODERN SPECIES 14 VPS45 (ENSRFEG00010019952) #12 OTUD7B (ENSRFEG00010019911) #13 MTMR11 (ENSRFEG00010019669) #14 SF3B4 (ENSRFEG00010019596) #15 SV2A (ENSRFEG00010019515) #16 BOLA1 (ENSRFEG00010019489) #17 ENSRFEG00010019479 H2AC21 (ENSRFEG00010019466) H2AC20 (ENSRFEG00010019447) ENSRFEG00010019413 ##23 ENSRFEG00010019403 ENSRFEG00010019396 #18 ENSRFEG00010019380 #22 ENSRFEG00010019363 #21 ENSRFEG00010019351 ##21 ENSRFEG00010019339 #22 H2BC18 (ENSRFEG00010019313) #23 FCGR1A (ENSRFEG00010019271) #24 HJV (ENSRFEG00010019205) #28 TXNIP (ENSRFEG00010019128) #30 POLR3GL (ENSRFEG00010019091) ANKRD34A (ENSRFEG00010019075) #33 LIX1L (ENSRFEG00010019031) #34 RBM8A (ENSRFEG00010018987) #35 PEX11B (ENSRFEG00010018908) #36 ITGA10 (ENSRFEG00010018433) #37 ANKRD35 (ENSRFEG00010018199) PIAS3 (ENSRFEG00010018138) NUDT17 (ENSRFEG00010018121) POLR3C (ENSRFEG00010018066) RNF115 (ENSRFEG00010018030) Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000163521 ENSGT00950000182890.D.c.a.b ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000165662 ENSGT00940000163388 ENSGT00940000163486 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a ENSGT01100000263486.a.b.a.b.a ENSGT01100000263486.a.b.b ENSGT01100000263486.a.a ENSGT01100000263548.a.b.b ENSGT01100000263575.B.u ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT00940000153125.D.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01060000248528.b.kh.yb #21 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##23 ENSGT00940000162941 ENSGT00940000153104.e.b.a.b ENSGT00940000153104.e.a.a.a.a.b ENSGT00940000153253.b.a.h ENSGT00940000160281 ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ##23 Suina ANCESTRAL SPECIES 8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000153118.db.b ENSGT01100000263575.A ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb #21 ENSGT01100000263474.a.b.a.d ENSGT00940000163525 ENSGT00940000153092.a.a.d ENSGT01100000263506.a.f.b ##23 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.a.a ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000160426 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b Pig MODERN SPECIES 12 PLEKHO1 (ENSSSCG00000022784) #11 VPS45 (ENSSSCG00000006661) #12 OTUD7B (ENSSSCG00000006663) #13 MTMR11 (ENSSSCG00000006664) #14 SF3B4 (ENSSSCG00000006665) #15 SV2A (ENSSSCG00000006666) #16 BOLA1 (ENSSSCG00000006667) #17 H2AC21 (ENSSSCG00000063420) H2AC20 (ENSSSCG00000034598) ENSSSCG00000047083 ENSSSCG00000053902 #20 ENSSSCG00000057447 #18 H2BC21 (ENSSSCG00000060759) ENSSSCG00000055629 ENSSSCG00000057512 #18 H3C14 (ENSSSCG00000063270) #22 ENSSSCG00000059426 #21 H2BC18 (ENSSSCG00000062160) #23 FCGR1A (ENSSSCG00000006678) #24 ENSSSCG00000006679 HJV (ENSSSCG00000035429) #28 TXNIP (ENSSSCG00000031262) #30 ENSSSCG00000006682 ANKRD34A (ENSSSCG00000037823) #33 LIX1L (ENSSSCG00000026502) #34 RBM8A (ENSSSCG00000028509) #35 ENSSSCG00000006685 PEX11B (ENSSSCG00000056541) #36 ITGA10 (ENSSSCG00000006687) #37 ANKRD35 (ENSSSCG00000006688) PIAS3 (ENSSSCG00000006689) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263506.a.e.a.a.a.a.a ##23 ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Camelidae ANCESTRAL SPECIES 6 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263506.a.e.a.a.a.a.a.b ##23 ENSGT01100000263559.B #20 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT00910000145379 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Alpaca MODERN SPECIES 5349 ENSVPAG00000015436 #21 H3-7 (ENSVPAG00000015477) #22 H2BC18 (ENSVPAG00000015447) #23 Artiodactyla_b ANCESTRAL SPECIES ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263575.B.t.a.a.a ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Cetacea ANCESTRAL SPECIES ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302.m.b #18 ENSGT01100000263575.B.t.a.a.a.a.b ENSGT01100000263575.B.t.a.a.a.a.a ENSGT00940000156302.m.a #18 ENSGT01100000263506.a.e.a.a.a.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Odontoceti ANCESTRAL SPECIES ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302.m.a #18 ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.t.a.a.b ENSGT01100000263506.a.e.b #23 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a Sperm whale MODERN SPECIES 15 PEX11B (ENSPCTG00005012430) #36 RBM8A (ENSPCTG00005012300) #35 LIX1L (ENSPCTG00005012257) #34 ENSPCTG00005012232 #33 ENSPCTG00005012215 #33 POLR3GL (ENSPCTG00005012074) TXNIP (ENSPCTG00005011915) #30 HJV (ENSPCTG00005011809) #28 ENSPCTG00005011661 ENSPCTG00005011561 ENSPCTG00005011537 #20 ENSPCTG00005011520 #18 ENSPCTG00005011505 ENSPCTG00005011490 ENSPCTG00005011469 #18 ENSPCTG00005011455 #22 ENSPCTG00005011442 H2AC20 (ENSPCTG00005011425) H2AC21 (ENSPCTG00005011410) BOLA1 (ENSPCTG00005011392) #17 SV2A (ENSPCTG00005011188) #16 SF3B4 (ENSPCTG00005011142) #15 MTMR11 (ENSPCTG00005010793) #14 OTUD7B (ENSPCTG00005010704) #13 VPS45 (ENSPCTG00005010502) #12 PLEKHO1 (ENSPCTG00005010430) #11 ANP32E (ENSPCTG00005010280) #9 CA14 (ENSPCTG00005010130) #8 APH1A (ENSPCTG00005010018) #7 C4H1orf54 (ENSPCTG00005009937) CIART (ENSPCTG00005009880) Odontoceti_a ANCESTRAL SPECIES ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537 #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT01100000263575.B.u ENSGT01100000263559.B #20 ENSGT00940000156302.m.a.b #18 ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b #18 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00390000005869.a #34 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Dolphin MODERN SPECIES 2133 OTUD7B (ENSTTRG00000005256) #13 MTMR11 (ENSTTRG00000005231) #14 SF3B4 (ENSTTRG00000005217) #15 SV2A (ENSTTRG00000005189) #16 BOLA1 (ENSTTRG00000005176) #17 H2AC21 (ENSTTRG00000005162) H2AC20 (ENSTTRG00000005146) H2BC21 (ENSTTRG00000005143) H3C14 (ENSTTRG00000005140) #20 ENSTTRG00000005136 #18 ENSTTRG00000005132 #18 ENSTTRG00000005120 ##21 H3-7 (ENSTTRG00000005108) #22 H2BC18 (ENSTTRG00000005097) #23 Odontoceti_b ANCESTRAL SPECIES ENSGT00390000014273.b #36 ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.B #20 ENSGT00940000156302.m.a.b #18 ENSGT01100000263575.B.t.a.a.a.a.a ENSGT01100000263575.B.t.a.a.a.a.b ENSGT00940000156302.m.b #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Monodontidae ANCESTRAL SPECIES ENSGT00530000063074.a ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01100000263506.a.e.b #23 ENSGT01100000263559.B #20 ENSGT01100000263506.a.e.a.a.a.a.a ##23 ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.t.a.a.b ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028.w.a #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Beluga whale MODERN SPECIES 99 ENSDLEG00000009879 CA14 (ENSDLEG00000009908) #8 ANP32E (ENSDLEG00000009954) #9 PLEKHO1 (ENSDLEG00000009972) #11 VPS45 (ENSDLEG00000009999) #12 ENSDLEG00000010020 #12 OTUD7B (ENSDLEG00000010038) #13 MTMR11 (ENSDLEG00000010078) #14 SF3B4 (ENSDLEG00000010135) #15 SV2A (ENSDLEG00000010159) #16 BOLA1 (ENSDLEG00000010185) #17 ENSDLEG00000010198 #18 H2AC21 (ENSDLEG00000010209) ENSDLEG00000010220 ##23 ENSDLEG00000010243 ##21 H3-7 (ENSDLEG00000010255) #22 H2BC18 (ENSDLEG00000010273) #23 ENSDLEG00000010280 ENSDLEG00000010319 Narwhal DUPLICATION Narwhal MODERN SPECIES 304 ANKRD35 (ENSMMNG00015001213) ITGA10 (ENSMMNG00015001059) #37 PEX11B (ENSMMNG00015000972) #36 RBM8A (ENSMMNG00015000918) #35 LIX1L (ENSMMNG00015000890) #34 ANKRD34A (ENSMMNG00015000874) #33 ENSMMNG00015000840 TXNIP (ENSMMNG00015000791) #30 HJV (ENSMMNG00015000764) #28 ENSMMNG00015000699 ENSMMNG00015000669 H2BC18 (ENSMMNG00015000651) #23 H3C13 (ENSMMNG00015000641) #20 ENSMMNG00015000624 #21 ENSMMNG00015000609 #22 ENSMMNG00015000597 #22 ENSMMNG00015000589 H2AC20 (ENSMMNG00015000583) H2AC21 (ENSMMNG00015000574) BOLA1 (ENSMMNG00015000565) #17 SV2A (ENSMMNG00015000538) #16 SF3B4 (ENSMMNG00015000508) #15 MTMR11 (ENSMMNG00015000420) #14 OTUD7B (ENSMMNG00015000357) #13 ENSMMNG00015000303 #12 PLEKHO1 (ENSMMNG00015000265) #11 ANP32E (ENSMMNG00015000229) #9 CA14 (ENSMMNG00015000189) #8 APH1A (ENSMMNG00015000151) #7 C1orf54 (ENSMMNG00015000118) CIART (ENSMMNG00015000077) Narwhal MODERN SPECIES 304 C1orf54 (ENSMMNG00015000118) APH1A (ENSMMNG00015000151) #7 CA14 (ENSMMNG00015000189) #8 ANP32E (ENSMMNG00015000229) #9 PLEKHO1 (ENSMMNG00015000265) #11 ENSMMNG00015000303 #12 OTUD7B (ENSMMNG00015000357) #13 MTMR11 (ENSMMNG00015000420) #14 SF3B4 (ENSMMNG00015000508) #15 SV2A (ENSMMNG00015000538) #16 BOLA1 (ENSMMNG00015000565) #17 H2AC21 (ENSMMNG00015000574) H2AC20 (ENSMMNG00015000583) ENSMMNG00015000589 ENSMMNG00015000597 #22 ENSMMNG00015000609 #22 ENSMMNG00015000624 #21 H3C13 (ENSMMNG00015000641) #20 H2BC18 (ENSMMNG00015000651) #23 ENSMMNG00015000669 ENSMMNG00015000699 HJV (ENSMMNG00015000764) #28 TXNIP (ENSMMNG00015000791) #30 ENSMMNG00015000840 ANKRD34A (ENSMMNG00015000874) #33 LIX1L (ENSMMNG00015000890) #34 RBM8A (ENSMMNG00015000918) #35 PEX11B (ENSMMNG00015000972) #36 ITGA10 (ENSMMNG00015001059) #37 ANKRD35 (ENSMMNG00015001213) PIAS3 (ENSMMNG00015001315) Vaquita DUPLICATION Vaquita MODERN SPECIES VPS45 (ENSPSNG00000001453) #12 OTUD7B (ENSPSNG00000001389) #13 MTMR11 (ENSPSNG00000001321) #14 SF3B4 (ENSPSNG00000001286) #15 SV2A (ENSPSNG00000001263) #16 BOLA1 (ENSPSNG00000001237) #17 H2AC21 (ENSPSNG00000001218) H2AC20 (ENSPSNG00000001208) H2BC21 (ENSPSNG00000001199) ENSPSNG00000001182 #22 ENSPSNG00000001168 #18 ENSPSNG00000001160 ENSPSNG00000001148 ENSPSNG00000001132 #18 ENSPSNG00000001122 #20 H3-7 (ENSPSNG00000001054) #22 H2BC18 (ENSPSNG00000001038) #23 ENSPSNG00000001015 ENSPSNG00000000971 HJV (ENSPSNG00000000911) #28 TXNIP (ENSPSNG00000000878) #30 POLR3GL (ENSPSNG00000000850) ANKRD34A (ENSPSNG00000000834) #33 LIX1L (ENSPSNG00000000812) #34 ENSPSNG00000000786 PEX11B (ENSPSNG00000000744) #36 ITGA10 (ENSPSNG00000000636) #37 ANKRD35 (ENSPSNG00000000537) PIAS3 (ENSPSNG00000000478) NUDT17 (ENSPSNG00000000422) POLR3C (ENSPSNG00000000389) Vaquita MODERN SPECIES ENSPSNG00000000786 LIX1L (ENSPSNG00000000812) #34 ANKRD34A (ENSPSNG00000000834) #33 POLR3GL (ENSPSNG00000000850) TXNIP (ENSPSNG00000000878) #30 HJV (ENSPSNG00000000911) #28 ENSPSNG00000000971 ENSPSNG00000001015 H2BC18 (ENSPSNG00000001038) #23 H3-7 (ENSPSNG00000001054) #22 ENSPSNG00000001122 #20 ENSPSNG00000001132 #18 ENSPSNG00000001148 ENSPSNG00000001160 ENSPSNG00000001168 #18 ENSPSNG00000001182 #22 H2BC21 (ENSPSNG00000001199) H2AC20 (ENSPSNG00000001208) H2AC21 (ENSPSNG00000001218) BOLA1 (ENSPSNG00000001237) #17 SV2A (ENSPSNG00000001263) #16 SF3B4 (ENSPSNG00000001286) #15 MTMR11 (ENSPSNG00000001321) #14 OTUD7B (ENSPSNG00000001389) #13 VPS45 (ENSPSNG00000001453) #12 PLEKHO1 (ENSPSNG00000001496) #11 ANP32E (ENSPSNG00000001573) #9 CA14 (ENSPSNG00000001634) #8 ENSPSNG00000001681 #7 CIART (ENSPSNG00000001759) MRPS21 (ENSPSNG00000001805) Pecora ANCESTRAL SPECIES 2 ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263474.a.b.a.d ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Yarkand deer MODERN SPECIES 12 APH1A (ENSCHYG00000012752) #7 CA14 (ENSCHYG00000012847) #8 ANP32E (ENSCHYG00000012932) #9 ENSCHYG00000013481 #11 VPS45 (ENSCHYG00000013592) #12 OTUD7B (ENSCHYG00000014204) #13 ENSCHYG00000014343 MTMR11 (ENSCHYG00000014428) #14 ENSCHYG00000014732 #15 SV2A (ENSCHYG00000014801) #16 BOLA1 (ENSCHYG00000014998) #17 H2AC21 (ENSCHYG00000015023) H2AC20 (ENSCHYG00000015051) H2BC21 (ENSCHYG00000015088) ENSCHYG00000015117 #21 H3-7 (ENSCHYG00000015151) #22 H2BC18 (ENSCHYG00000015177) #23 ENSCHYG00000015246 FCGR1A (ENSCHYG00000015523) #24 ENSCHYG00000015606 HJV (ENSCHYG00000015634) #28 TXNIP (ENSCHYG00000015719) #30 POLR3GL (ENSCHYG00000015898) ANKRD34A (ENSCHYG00000015933) #33 LIX1L (ENSCHYG00000015993) #34 RBM8A (ENSCHYG00000016090) #35 PEX11B (ENSCHYG00000004579) #36 ITGA10 (ENSCHYG00000004850) #37 ANKRD35 (ENSCHYG00000004968) PIAS3 (ENSCHYG00000005027) NUDT17 (ENSCHYG00000005077) Percora_a ANCESTRAL SPECIES 1 ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263474.a.b.a.d ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 247 ANP32E (ENSMMSG00000020532) #9 PLEKHO1 (ENSMMSG00000020759) #11 VPS45 (ENSMMSG00000020801) #12 OTUD7B (ENSMMSG00000020949) #13 MTMR11 (ENSMMSG00000020972) #14 SF3B4 (ENSMMSG00000021043) #15 SV2A (ENSMMSG00000021080) #16 BOLA1 (ENSMMSG00000021162) #17 H2AC21 (ENSMMSG00000021172) H2AC20 (ENSMMSG00000021185) H2BC21 (ENSMMSG00000021195) ENSMMSG00000021208 #22 ENSMMSG00000013230 #18 ENSMMSG00000013235 ##23 ENSMMSG00000013242 #21 H3-7 (ENSMMSG00000013251) #22 H2BC18 (ENSMMSG00000013260) #23 ENSMMSG00000013270 ENSMMSG00000013282 #24 ENSMMSG00000013290 ENSMMSG00000013298 ENSMMSG00000013310 Siberian musk deer MODERN SPECIES 247 ENSMMSG00000013310 ENSMMSG00000013298 ENSMMSG00000013290 ENSMMSG00000013282 #24 ENSMMSG00000013270 H2BC18 (ENSMMSG00000013260) #23 H3-7 (ENSMMSG00000013251) #22 ENSMMSG00000013242 #21 ENSMMSG00000013235 ##23 ENSMMSG00000013230 #18 ENSMMSG00000021208 #22 H2BC21 (ENSMMSG00000021195) H2AC20 (ENSMMSG00000021185) H2AC21 (ENSMMSG00000021172) BOLA1 (ENSMMSG00000021162) #17 SV2A (ENSMMSG00000021080) #16 SF3B4 (ENSMMSG00000021043) #15 MTMR11 (ENSMMSG00000020972) #14 OTUD7B (ENSMMSG00000020949) #13 VPS45 (ENSMMSG00000020801) #12 PLEKHO1 (ENSMMSG00000020759) #11 ANP32E (ENSMMSG00000020532) #9 CA14 (ENSMMSG00000020490) #8 APH1A (ENSMMSG00000020404) #7 C1orf54 (ENSMMSG00000020377) CIART (ENSMMSG00000020350) Bovidae ANCESTRAL SPECIES 1 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263559.B #20 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##21 ENSGT01100000263474.a.b.a.d ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537.i #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Bovinae ANCESTRAL SPECIES 1 ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT01100000263506.a.e.a.a.a.a.b.a ##23 ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537.i #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 American bison MODERN SPECIES 3032 ENSBBBG00000000337 ENSBBBG00000000326 FCGR1A (ENSBBBG00000023183) #24 H2BC18 (ENSBBBG00000023192) #23 H3C13 (ENSBBBG00000023194) #20 H4C15 (ENSBBBG00000023197) ##21 ENSBBBG00000023201 ##22 ENSBBBG00000023206 #18 ENSBBBG00000006078 ##23 ENSBBBG00000023255 ##23 ENSBBBG00000023258 #18 ENSBBBG00000008681 #22 H2BC21 (ENSBBBG00000008849) H2AC20 (ENSBBBG00000023272) H2AC21 (ENSBBBG00000023276) ENSBBBG00000023283 #17 ENSBBBG00000023289 #17 SV2A (ENSBBBG00000023321) #16 ENSBBBG00000006102 #15 MTMR11 (ENSBBBG00000023347) #14 OTUD7B (ENSBBBG00000023362) #13 VPS45 (ENSBBBG00000023405) #12 PLEKHO1 (ENSBBBG00000023413) #11 ENSBBBG00000023424 #9 CA14 (ENSBBBG00000023456) #8 APH1A (ENSBBBG00000023500) #7 C1orf54 (ENSBBBG00000008854) Bos ANCESTRAL SPECIES ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT00420000029746.f ENSGT00950000183190.a.b.a.b ENSGT01050000244808.A.b.b.a #24 ENSGT01100000263506.a.e.b #23 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537.i #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 ENSGT00500000045038 Bos_a ANCESTRAL SPECIES 47 ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.u ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000153118.db.a.a.b.a.b ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537.i #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000003103 ENSGT00390000018360 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 22 VPS45 (ENSBGRG00000016926) #12 OTUD7B (ENSBGRG00000016856) #13 MTMR11 (ENSBGRG00000016764) #14 ENSBGRG00000016698 #15 SV2A (ENSBGRG00000016418) #16 ENSBGRG00000016367 H2AC21 (ENSBGRG00000016349) H2AC20 (ENSBGRG00000016331) H2BC21 (ENSBGRG00000016302) ENSBGRG00000016266 #22 ENSBGRG00000016242 #20 ENSBGRG00000016186 ##23 ENSBGRG00000016162 ##23 ENSBGRG00000016148 #18 ENSBGRG00000016136 #22 ENSBGRG00000016114 #22 H2BC18 (ENSBGRG00000016034) #23 FCGR1A (ENSBGRG00000015945) #24 ENSBGRG00000015767 ENSBGRG00000015702 HJV (ENSBGRG00000015528) #28 TXNIP (ENSBGRG00000015334) #30 POLR3GL (ENSBGRG00000015249) ANKRD34A (ENSBGRG00000015222) #33 LIX1L (ENSBGRG00000015160) #34 ENSBGRG00000014985 #35 ENSBGRG00000014804 PEX11B (ENSBGRG00000014702) #36 ITGA10 (ENSBGRG00000013986) #37 ANKRD35 (ENSBGRG00000013826) PIAS3 (ENSBGRG00000013646) Domestic yak DUPLICATION Domestic yak MODERN SPECIES 22 LIX1L (ENSBGRG00000015160) #34 ANKRD34A (ENSBGRG00000015222) #33 POLR3GL (ENSBGRG00000015249) TXNIP (ENSBGRG00000015334) #30 HJV (ENSBGRG00000015528) #28 ENSBGRG00000015702 ENSBGRG00000015767 FCGR1A (ENSBGRG00000015945) #24 H2BC18 (ENSBGRG00000016034) #23 ENSBGRG00000016114 #22 ENSBGRG00000016136 #22 ENSBGRG00000016148 #18 ENSBGRG00000016162 ##23 ENSBGRG00000016186 ##23 ENSBGRG00000016242 #20 ENSBGRG00000016266 #22 H2BC21 (ENSBGRG00000016302) H2AC20 (ENSBGRG00000016331) H2AC21 (ENSBGRG00000016349) ENSBGRG00000016367 SV2A (ENSBGRG00000016418) #16 ENSBGRG00000016698 #15 MTMR11 (ENSBGRG00000016764) #14 OTUD7B (ENSBGRG00000016856) #13 VPS45 (ENSBGRG00000016926) #12 PLEKHO1 (ENSBGRG00000017135) #11 ENSBGRG00000017198 #9 ENSBGRG00000017224 CA14 (ENSBGRG00000000220) #8 APH1A (ENSBGRG00000000249) #7 C1orf54 (ENSBGRG00000000272) Domestic yak MODERN SPECIES 22 PLEKHO1 (ENSBGRG00000017135) #11 VPS45 (ENSBGRG00000016926) #12 OTUD7B (ENSBGRG00000016856) #13 MTMR11 (ENSBGRG00000016764) #14 ENSBGRG00000016698 #15 SV2A (ENSBGRG00000016418) #16 ENSBGRG00000016367 H2AC21 (ENSBGRG00000016349) H2AC20 (ENSBGRG00000016331) H2BC21 (ENSBGRG00000016302) ENSBGRG00000016266 #22 ENSBGRG00000016242 #20 ENSBGRG00000016186 ##23 ENSBGRG00000016162 ##23 ENSBGRG00000016148 #18 ENSBGRG00000016136 #22 ENSBGRG00000016114 #22 H2BC18 (ENSBGRG00000016034) #23 FCGR1A (ENSBGRG00000015945) #24 ENSBGRG00000015767 ENSBGRG00000015702 HJV (ENSBGRG00000015528) #28 TXNIP (ENSBGRG00000015334) #30 POLR3GL (ENSBGRG00000015249) ANKRD34A (ENSBGRG00000015222) #33 LIX1L (ENSBGRG00000015160) #34 ENSBGRG00000014985 #35 ENSBGRG00000014804 PEX11B (ENSBGRG00000014702) #36 ITGA10 (ENSBGRG00000013986) #37 ANKRD35 (ENSBGRG00000013826) Bos_b ANCESTRAL SPECIES 1 ENSGT00500000045038 ENSGT00390000018360 ENSGT00390000003103 ENSGT00390000002049.c.a #7 ENSGT00940000156893 #8 ENSGT00950000182907.a.a #9 ENSGT00530000063760.b #11 ENSGT00550000075028 #12 ENSGT00940000159172 #13 ENSGT00940000160276 #14 ENSGT00870000136537.i #15 ENSGT00950000182940.b.a.b #16 ENSGT00510000048165 #17 ENSGT00940000153118.db.a.a.b.a.a ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b #28 ENSGT00940000158522 #30 ENSGT01060000248645 ENSGT00390000012355.B.b #33 ENSGT00730000111185 #35 ENSGT01050000244841.A.a.b ENSGT00390000014273.b #36 ENSGT00940000158423 #37 ENSGT00530000063074.a ENSGT01100000263480.a.a.a.b.a.b.b.a.b ENSGT01030000234539.a.a.b.a.a Hybrid Bos Indicus MODERN SPECIES 22 PRPF3 (ENSBIXG00005026388) MRPS21 (ENSBIXG00005004483) CIART (ENSBIXG00005026269) APH1A (ENSBIXG00005026181) #7 CA14 (ENSBIXG00005004451) #8 ENSBIXG00005006696 #9 PLEKHO1 (ENSBIXG00005025976) #11 VPS45 (ENSBIXG00005025887) #12 OTUD7B (ENSBIXG00005025620) #13 MTMR11 (ENSBIXG00005004349) #14 ENSBIXG00005004342 #15 SV2A (ENSBIXG00005025476) #16 ENSBIXG00005025435 #17 H2AC20 (ENSBIXG00005025423) ENSBIXG00005004318 ##23 H3-7 (ENSBIXG00005025404) #22 ENSBIXG00005004313 #21 H2BC18 (ENSBIXG00005025377) #23 FCGR1A (ENSBIXG00005025364) #24 ENSBIXG00005025348 ENSBIXG00005025317 ENSBIXG00005025301 HJV (ENSBIXG00005006687) #28 TXNIP (ENSBIXG00005025179) #30 POLR3GL (ENSBIXG00005025127) ANKRD34A (ENSBIXG00005025105) #33 ENSBIXG00005025081 #35 ENSBIXG00005025011 ITGA10 (ENSBIXG00005004255) #37 ANKRD35 (ENSBIXG00005024727) ENSBIXG00005004206 Cow DUPLICATION Cow MODERN SPECIES 11 ENSBTAG00000012171 SF3B1 (ENSBTAG00000008915) COQ10B (ENSBTAG00000004659) HSPD1 (ENSBTAG00000012586) HSPE1 (ENSBTAG00000012589) MOB4 (ENSBTAG00000019116) RFTN2 (ENSBTAG00000007652) MARS2 (ENSBTAG00000002056) BOLL (ENSBTAG00000031614) PLCL1 (ENSBTAG00000007635) SATB2 (ENSBTAG00000016334) ENSBTAG00000031595 C2H2orf69 (ENSBTAG00000009952) TYW5 (ENSBTAG00000019232) MAIP1 (ENSBTAG00000019231) ENSBTAG00000024003 #22 SPATS2L (ENSBTAG00000016092) KCTD18 (ENSBTAG00000002272) SGO2 (ENSBTAG00000031579) AOX1 (ENSBTAG00000009725) ENSBTAG00000047849 AOX4 (ENSBTAG00000038878) AOX2 (ENSBTAG00000026812) BZW1 (ENSBTAG00000006049) CLK1 (ENSBTAG00000005408) PPIL3 (ENSBTAG00000005416) NIF3L1 (ENSBTAG00000018282) ORC2 (ENSBTAG00000031473) HYCC2 (ENSBTAG00000021201) NDUFB3 (ENSBTAG00000012760) CFLAR (ENSBTAG00000010998) Cow MODERN SPECIES 51 ENSBTAG00000054658 ENSBTAG00000050465 ENSBTAG00000051309 ##21 ENSBTAG00000050095 #20 ENSBTAG00000053942 ENSBTAG00000053309 ENSBTAG00000053718 ##21 ENSBTAG00000051272 #22 ENSBTAG00000050054 ENSBTAG00000051460 ENSBTAG00000050880 ##21 ENSBTAG00000054782 #20 ENSBTAG00000052212 ENSBTAG00000051398 ENSBTAG00000049559 ENSBTAG00000052507 ##21 ENSBTAG00000052656 ENSBTAG00000048564 ENSBTAG00000053021 ##21 ENSBTAG00000054906 #20 ENSBTAG00000051109 Cow MODERN SPECIES 22 CA14 (ENSBTAG00000021481) #8 ANP32E (ENSBTAG00000016730) #9 PLEKHO1 (ENSBTAG00000004852) #11 VPS45 (ENSBTAG00000020635) #12 OTUD7B (ENSBTAG00000001586) #13 MTMR11 (ENSBTAG00000012496) #14 SF3B4 (ENSBTAG00000012495) #15 SV2A (ENSBTAG00000001599) #16 BOLA1 (ENSBTAG00000006050) #17 H2AC20 (ENSBTAG00000040098) H2AC21 (ENSBTAG00000032456) ENSBTAG00000050122 H2AC19 (ENSBTAG00000046003) H4C14 (ENSBTAG00000032453) H2AC18 (ENSBTAG00000038476) #18 H3C13 (ENSBTAG00000050881) #22 H2BC18 (ENSBTAG00000032455) #23 FCGR1A (ENSBTAG00000008592) #24 ENSBTAG00000037565 MGC134040 (ENSBTAG00000022741) HJV (ENSBTAG00000021823) #28 TXNIP (ENSBTAG00000020060) #30 POLR3GL (ENSBTAG00000013910) ANKRD34A (ENSBTAG00000008365) #33 RBM8A (ENSBTAG00000008369) #35 GNRHR2 (ENSBTAG00000008370) PEX11B (ENSBTAG00000008372) #36 ITGA10 (ENSBTAG00000008373) #37 ANKRD35 (ENSBTAG00000038844) ENSBTAG00000052421 PIAS3 (ENSBTAG00000021634) Caprinae ANCESTRAL SPECIES 51 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a.vc.a ##23 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01060000248528.b.jh.b ##21 ENSGT01100000263514.A.e.a.a ENSGT00940000155501.a.b ENSGT00990000203553.c.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.b ##23 ENSGT00940000155501.a.a ENSGT00940000153092.a.b.f.n.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##23 ENSGT00940000163525 ENSGT01100000263474.a.b.a.d ENSGT00940000156302 #18 ENSGT01100000263559.A.f #22 ENSGT01060000248528.b.kh.yb #21 ENSGT01100000263517.b.d.m.a.a.b ENSGT00940000163082 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01100000263575.A ENSGT00940000153092.a.a.c.a.b.b.b ENSGT00940000163269 ENSGT00940000160468 ENSGT00940000161926 ENSGT00940000162523 ENSGT00940000162346 ENSGT00940000160894 ENSGT01100000263474.a.a.c.a ENSGT01100000263474.a.a.c.b ENSGT00950000183108.a Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES PLEKHO1 (ENSOARG00020007594) #11 VPS45 (ENSOARG00020007445) #12 OTUD7B (ENSOARG00020007348) #13 MTMR11 (ENSOARG00020007236) #14 SF3B4 (ENSOARG00020007183) #15 SV2A (ENSOARG00020007009) #16 BOLA1 (ENSOARG00020006951) #17 HIST2H2AB (ENSOARG00020006921) HIST2H2AC (ENSOARG00020006891) HIST2H2BE (ENSOARG00020006877) ENSOARG00020006850 #20 ENSOARG00020006832 #18 ENSOARG00020006810 ENSOARG00020006796 ENSOARG00020006772 #18 ENSOARG00020006745 #22 ENSOARG00020006725 #21 H3-7 (ENSOARG00020006703) #22 H2BC18 (ENSOARG00020006656) #23 FCGR1A (ENSOARG00020006588) #24 ENSOARG00020006514 ENSOARG00020006487 ENSOARG00020006466 HJV (ENSOARG00020004031) #28 TXNIP (ENSOARG00020003962) #30 POLR3GL (ENSOARG00020003936) ANKRD34A (ENSOARG00020003925) #33 LIX1L (ENSOARG00020003889) #34 RBM8A (ENSOARG00020003860) #35 PEX11B (ENSOARG00020003815) #36 ITGA10 (ENSOARG00020003429) #37 Rambouillet Sheep MODERN SPECIES OTUD7B (ENSOARG00020007348) #13 MTMR11 (ENSOARG00020007236) #14 SF3B4 (ENSOARG00020007183) #15 SV2A (ENSOARG00020007009) #16 BOLA1 (ENSOARG00020006951) #17 HIST2H2AB (ENSOARG00020006921) HIST2H2AC (ENSOARG00020006891) HIST2H2BE (ENSOARG00020006877) ENSOARG00020006850 #20 ENSOARG00020006832 #18 ENSOARG00020006810 ENSOARG00020006796 ENSOARG00020006772 #18 ENSOARG00020006745 #22 ENSOARG00020006725 #21 H3-7 (ENSOARG00020006703) #22 H2BC18 (ENSOARG00020006656) #23 FCGR1A (ENSOARG00020006588) #24 ENSOARG00020006514 ENSOARG00020006487 ENSOARG00020006466 HJV (ENSOARG00020004031) #28 TXNIP (ENSOARG00020003962) #30 POLR3GL (ENSOARG00020003936) ANKRD34A (ENSOARG00020003925) #33 LIX1L (ENSOARG00020003889) #34 RBM8A (ENSOARG00020003860) #35 PEX11B (ENSOARG00020003815) #36 ITGA10 (ENSOARG00020003429) #37 PIAS3 (ENSOARG00020003167) NUDT17 (ENSOARG00020003144) Goat DUPLICATION Goat MODERN SPECIES 22 PLEKHO1 (ENSCHIG00000022413) #11 VPS45 (ENSCHIG00000010595) #12 OTUD7B (ENSCHIG00000020643) #13 MTMR11 (ENSCHIG00000021928) #14 ENSCHIG00000025663 #15 SV2A (ENSCHIG00000017231) #16 BOLA1 (ENSCHIG00000023087) #17 H2AC21 (ENSCHIG00000006209) H2AC20 (ENSCHIG00000010392) H2BC21 (ENSCHIG00000012955) ENSCHIG00000010054 #20 ENSCHIG00000022263 ENSCHIG00000007823 ENSCHIG00000013722 ENSCHIG00000008044 ENSCHIG00000013241 #22 ENSCHIG00000009699 #21 ENSCHIG00000010234 #22 H2BC18 (ENSCHIG00000007673) #23 FCGR1A (ENSCHIG00000027141) #24 ENSCHIG00000017683 ENSCHIG00000023415 HJV (ENSCHIG00000010408) #28 TXNIP (ENSCHIG00000017689) #30 POLR3GL (ENSCHIG00000008824) ANKRD34A (ENSCHIG00000007942) #33 LIX1L (ENSCHIG00000012584) #34 RBM8A (ENSCHIG00000012114) #35 ITGA10 (ENSCHIG00000027027) #37 ANKRD35 (ENSCHIG00000018547) PIAS3 (ENSCHIG00000010071) Goat MODERN SPECIES 22 OTUD7B (ENSCHIG00000020643) #13 MTMR11 (ENSCHIG00000021928) #14 ENSCHIG00000025663 #15 SV2A (ENSCHIG00000017231) #16 BOLA1 (ENSCHIG00000023087) #17 H2AC21 (ENSCHIG00000006209) H2AC20 (ENSCHIG00000010392) H2BC21 (ENSCHIG00000012955) ENSCHIG00000010054 #20 ENSCHIG00000022263 ENSCHIG00000007823 ENSCHIG00000013722 ENSCHIG00000008044 ENSCHIG00000013241 #22 ENSCHIG00000009699 #21 ENSCHIG00000010234 #22 H2BC18 (ENSCHIG00000007673) #23 FCGR1A (ENSCHIG00000027141) #24 ENSCHIG00000017683 ENSCHIG00000023415 HJV (ENSCHIG00000010408) #28 TXNIP (ENSCHIG00000017689) #30 POLR3GL (ENSCHIG00000008824) ANKRD34A (ENSCHIG00000007942) #33 LIX1L (ENSCHIG00000012584) #34 RBM8A (ENSCHIG00000012114) #35 ITGA10 (ENSCHIG00000027027) #37 ANKRD35 (ENSCHIG00000018547) PIAS3 (ENSCHIG00000010071) NUDT17 (ENSCHIG00000014413) POLR3C (ENSCHIG00000022431) Atlantogenata ANCESTRAL SPECIES 205 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b Afrotheria ANCESTRAL SPECIES 267 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b Afrotheria_a ANCESTRAL SPECIES 271 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 ENSGT01050000244808.A.b.b.a #24 ENSGT00950000183190.a.b.a.b Hyrax MODERN SPECIES 9433 ENSPCAG00000018798 #18 ENSPCAG00000018887 #22 H2BC18 (ENSPCAG00000018876) #23 Xenarthra ANCESTRAL SPECIES 1952 ENSGT01100000263559.A.f #22 ENSGT01100000263506.a.e.b #23 Sloth MODERN SPECIES 8910 H3-7 (ENSCHOG00000003977) #22 H2BC18 (ENSCHOG00000003973) #23 Marsupialia ANCESTRAL SPECIES 22 ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f #22 ENSGT01060000248528.b.kh #21 ENSGT01100000263559.B #20 ENSGT00940000156302 #18 ENSGT01100000263575.B ENSGT01100000263575.A ENSGT00940000161385 ENSGT00940000158017 ENSGT00940000161530 ENSGT00940000161686 ENSGT00530000063753.B ENSGT00940000153882.a.b.b.b ENSGT00390000007779 ENSGT00940000157016 ENSGT00940000158772 ENSGT00940000163105 Opossum DUPLICATION Opossum MODERN SPECIES 1 ENSMODG00000039920 ENSMODG00000038299 ENSMODG00000038832 ENSMODG00000040021 #22 ENSMODG00000044872 ENSMODG00000045603 ENSMODG00000041872 HIST1H4I (ENSMODG00000050634) #21 ENSMODG00000023582 ENSMODG00000039289 ENSMODG00000040158 ENSMODG00000037177 ENSMODG00000040044 ENSMODG00000039862 ENSMODG00000049273 ENSMODG00000038443 #22 ENSMODG00000039692 ENSMODG00000041060 ENSMODG00000008744 ENSMODG00000008756 ENSMODG00000008778 ZNF496 (ENSMODG00000008791) ENSMODG00000048059 ENSMODG00000008799 ENSMODG00000046293 ENSMODG00000008807 ENSMODG00000008875 TRIM58 (ENSMODG00000008884) ENSMODG00000008925 ENSMODG00000008951 ENSMODG00000008981 Opossum MODERN SPECIES 1 ENSMODG00000008744 ENSMODG00000041060 ENSMODG00000039692 ENSMODG00000038443 #22 ENSMODG00000049273 ENSMODG00000039862 ENSMODG00000040044 ENSMODG00000037177 ENSMODG00000040158 ENSMODG00000039289 ENSMODG00000023582 HIST1H4I (ENSMODG00000050634) #21 ENSMODG00000041872 ENSMODG00000045603 ENSMODG00000044872 ENSMODG00000040021 #22 ENSMODG00000038832 ENSMODG00000038299 ENSMODG00000039920 HIST1H4I (ENSMODG00000039780) ##21 ENSMODG00000028015 ENSMODG00000046495 ENSMODG00000047806 BTN2A2 (ENSMODG00000008595) BTN1A1 (ENSMODG00000047634) ENSMODG00000005045 PIK3R5 (ENSMODG00000008530) ENSMODG00000041093 STX8 (ENSMODG00000008471) CFAP52 (ENSMODG00000008363) USP43 (ENSMODG00000008348) Marsupialia_b ANCESTRAL SPECIES 59 ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f #22 ENSGT01100000263575.B ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT00940000163082 Diprotodontia ANCESTRAL SPECIES 119 ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f #22 ENSGT01100000263575.B ENSGT00940000156302 #18 ENSGT01100000263559.B #20 ENSGT00940000163082 Wallaby DUPLICATION Wallaby MODERN SPECIES 14270 ENSMEUG00000009843 ENSMEUG00000009839 ENSMEUG00000009833 #22 ENSMEUG00000009816 #21 Wallaby MODERN SPECIES 12404 ENSMEUG00000005952 #20 ENSMEUG00000005947 #22 Wallaby MODERN SPECIES 10486 ENSMEUG00000000670 #22 ENSMEUG00000000673 Wallaby MODERN SPECIES 13830 ENSMEUG00000009755 #22 ENSMEUG00000009762 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 #37 ENSGT00390000014273.b #36 ENSGT01050000244841.A.a.b ENSGT00730000111185 #35 ENSGT00390000005869.a #34 ENSGT00390000012355.B.b #33 ENSGT01060000248645 ENSGT00940000158522 #30 ENSGT00950000183112.b.b #28 ENSGT01100000263575.B.e.b ENSGT00940000153092.a.a.b ENSGT01100000263559.A.f #22 ENSGT01100000263575.B.f ENSGT00940000153125.F ENSGT00940000153118.db.a.a.b.a.b ENSGT01100000263506.a.f ##23 ENSGT00510000048165 #17 ENSGT00950000182940.b.a.b #16 ENSGT00870000136537 #15 ENSGT00940000160276 #14 ENSGT00940000159172 #13 ENSGT00550000075028 #12 ENSGT00530000063760.b #11 ENSGT00950000182907.a.a #9 ENSGT00940000156893 #8 ENSGT00390000002049.c.a #7 ENSGT00390000018360 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 ENSVURG00010001436 ENSVURG00010001404 #28 ENSVURG00010001381 #21 ENSVURG00010001379 #21 ENSVURG00010001372 #21 ENSVURG00010001364 #21 ENSVURG00010001356 #21 ENSVURG00010001350 ENSVURG00010001341 #21 ENSVURG00010001317 ENSVURG00010001308 #20 ENSVURG00010001221 #18 ENSVURG00010001206 ENSVURG00010001199 ENSVURG00010001177 ENSVURG00010001172 #22 ENSVURG00010001164 ENSVURG00010001132 ENSVURG00010001073 ENSVURG00010001047 ENSVURG00010001021 ##23 ENSVURG00010000996 #17 ENSVURG00010000953 #16 ENSVURG00010000937 #15 ENSVURG00010000922 #14 ENSVURG00010000895 #13 ENSVURG00010000870 #12 ENSVURG00010000839 #11 ANP32E (ENSVURG00010000762) #9 ENSVURG00010000731 #8 ENSVURG00010000715 #7 Common wonbat MODERN SPECIES 746 ENSVURG00010005173 ENSVURG00010005043 ENSVURG00010005034 ##23 ENSVURG00010005028 #22 ENSVURG00010004997 ENSVURG00010004986 #20 ENSVURG00010004971 ENSVURG00010004956 ENSVURG00010004911 ENSVURG00010004824 ENSVURG00010004807 #21 ENSVURG00010004804 ENSVURG00010004790 ENSVURG00010004733 ENSVURG00010004681 ENSVURG00010004665 BTN1A1 (ENSVURG00010004551) ENSVURG00010004530 ZNF286A (ENSVURG00010004522) koala DUPLICATION koala MODERN SPECIES 558 ENSPCIG00000032833 ENSPCIG00000036566 ENSPCIG00000033888 ENSPCIG00000033339 ENSPCIG00000035808 #22 ENSPCIG00000036723 #21 koala MODERN SPECIES 4 LIX1L (ENSPCIG00000011929) #34 ANKRD34A (ENSPCIG00000011927) #33 POLR3GL (ENSPCIG00000011925) TXNIP (ENSPCIG00000011922) #30 HJV (ENSPCIG00000031042) #28 ENSPCIG00000031302 #21 ENSPCIG00000037192 #21 ENSPCIG00000034427 ##21 ENSPCIG00000032472 #21 ENSPCIG00000031998 #21 ENSPCIG00000034490 #21 ENSPCIG00000034324 #18 H1-5 (ENSPCIG00000034869) ENSPCIG00000019912 ENSPCIG00000036686 ENSPCIG00000036846 #22 ENSPCIG00000037267 ENSPCIG00000008760 H2AC21 (ENSPCIG00000036441) ENSPCIG00000031608 ##23 BOLA1 (ENSPCIG00000008763) #17 SV2A (ENSPCIG00000008764) #16 SF3B4 (ENSPCIG00000008765) #15 MTMR11 (ENSPCIG00000008766) #14 OTUD7B (ENSPCIG00000008768) #13 VPS45 (ENSPCIG00000008774) #12 PLEKHO1 (ENSPCIG00000030649) #11 ENSPCIG00000033433 #9 CA14 (ENSPCIG00000008783) #8 APH1A (ENSPCIG00000008786) #7 CIART (ENSPCIG00000035308) Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 3 CCDC42 (ENSSHAG00000007214) ENSSHAG00000006948 ENSSHAG00000005879 ENSSHAG00000005087 ENSSHAG00000002977 CFAP52 (ENSSHAG00000021427) STX8 (ENSSHAG00000010361) NTN1 (ENSSHAG00000027889) ENSSHAG00000002313 ENSSHAG00000000878 ENSSHAG00000025589 ENSSHAG00000022029 ENSSHAG00000003486 ENSSHAG00000005678 ENSSHAG00000022380 ENSSHAG00000023000 #22 ENSSHAG00000028669 ENSSHAG00000030497 #21 ENSSHAG00000027822 ENSSHAG00000030240 ENSSHAG00000026049 #22 ENSSHAG00000031290 ENSSHAG00000020659 #22 ENSSHAG00000029033 ENSSHAG00000031549 ZNF692 (ENSSHAG00000005493) ENSSHAG00000003615 ENSSHAG00000002617 HEXD (ENSSHAG00000002559) OGFOD3 (ENSSHAG00000028666) CYBC1 (ENSSHAG00000022500) Tasmanian devil MODERN SPECIES 3 TBCD (ENSSHAG00000028769) FN3KRP (ENSSHAG00000023662) WDR45B (ENSSHAG00000003572) FOXK2 (ENSSHAG00000029677) NARF (ENSSHAG00000002826) CYBC1 (ENSSHAG00000022500) OGFOD3 (ENSSHAG00000028666) HEXD (ENSSHAG00000002559) ENSSHAG00000002617 ENSSHAG00000003615 ZNF692 (ENSSHAG00000005493) ENSSHAG00000031549 ENSSHAG00000029033 ENSSHAG00000020659 #22 ENSSHAG00000031290 ENSSHAG00000026049 #22 ENSSHAG00000030240 ENSSHAG00000027822 ENSSHAG00000030497 #21 ENSSHAG00000028669 ENSSHAG00000023000 #22 ENSSHAG00000022380 ENSSHAG00000005678 ENSSHAG00000003486 ENSSHAG00000022029 ENSSHAG00000025589 ENSSHAG00000000878 ENSSHAG00000002313 NTN1 (ENSSHAG00000027889) STX8 (ENSSHAG00000010361) CFAP52 (ENSSHAG00000021427) Tasmanian devil MODERN SPECIES 3 B3GNTL1 (ENSSHAG00000003694) ZNF750 (ENSSHAG00000008537) TBCD (ENSSHAG00000028769) FN3KRP (ENSSHAG00000023662) WDR45B (ENSSHAG00000003572) FOXK2 (ENSSHAG00000029677) NARF (ENSSHAG00000002826) CYBC1 (ENSSHAG00000022500) OGFOD3 (ENSSHAG00000028666) HEXD (ENSSHAG00000002559) ENSSHAG00000002617 ENSSHAG00000003615 ZNF692 (ENSSHAG00000005493) ENSSHAG00000031549 ENSSHAG00000029033 ENSSHAG00000020659 #22 ENSSHAG00000031290 ENSSHAG00000026049 #22 ENSSHAG00000030240 ENSSHAG00000027822 ENSSHAG00000030497 #21 ENSSHAG00000028669 ENSSHAG00000023000 #22 ENSSHAG00000022380 ENSSHAG00000005678 ENSSHAG00000003486 ENSSHAG00000022029 ENSSHAG00000025589 ENSSHAG00000000878 ENSSHAG00000002313 NTN1 (ENSSHAG00000027889) Tasmanian devil MODERN SPECIES 3 CNPY4 (ENSSHAG00000023094) AP4M1 (ENSSHAG00000028001) MCM7 (ENSSHAG00000029246) COPS6 (ENSSHAG00000011684) ZNF3 (ENSSHAG00000011938) ENSSHAG00000030879 ENSSHAG00000012439 ENSSHAG00000012687 ENSSHAG00000012892 ENSSHAG00000027999 ENSSHAG00000025476 ENSSHAG00000000638 ENSSHAG00000025316 ##21 ENSSHAG00000022269 ENSSHAG00000026791 ENSSHAG00000000585 #22 ENSSHAG00000026903 ENSSHAG00000029410 ENSSHAG00000024125 ENSSHAG00000001547 ENSSHAG00000004487 ENSSHAG00000001637 ENSSHAG00000004434 ENSSHAG00000005615 ENSSHAG00000000918 POLR1H (ENSSHAG00000001554) RNF39 (ENSSHAG00000025183) PPP1R11 (ENSSHAG00000025209) TRIM10 (ENSSHAG00000027656) TRIM15 (ENSSHAG00000002782) TRIM26 (ENSSHAG00000002914) Platypus DUPLICATION Platypus MODERN SPECIES 88 ENSOANG00000045700 ENSOANG00000039935 ENSOANG00000000173 ENSOANG00000046785 #20 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #20 H1-2 (ENSOANG00000047788) ENSOANG00000042244 #22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 ENSOANG00000038871 #21 ENSOANG00000049432 ENSOANG00000038547 #20 ENSOANG00000047517 #21 ENSOANG00000048954 #22 ENSOANG00000044997 #21 ENSOANG00000038271 ENSOANG00000049942 ENSOANG00000044699 #20 ENSOANG00000040358 ENSOANG00000040609 H2AC21 (ENSOANG00000047209) ENSOANG00000047921 ENSOANG00000041422 ENSOANG00000036404 ENSOANG00000039121 ENSOANG00000049615 ENSOANG00000036630 ENSOANG00000020663 ENSOANG00000019718 Platypus MODERN SPECIES 88 ENSOANG00000046504 ENSOANG00000043122 #21 ENSOANG00000041825 ENSOANG00000036615 ENSOANG00000042346 H1-1 (ENSOANG00000050321) ENSOANG00000039485 ENSOANG00000045994 ENSOANG00000040130 ENSOANG00000045306 ENSOANG00000038051 ENSOANG00000038321 ENSOANG00000048075 ENSOANG00000047142 ENSOANG00000037816 ENSOANG00000045607 #22 ENSOANG00000037825 #21 ENSOANG00000051301 #18 ENSOANG00000045094 ENSOANG00000038387 ENSOANG00000045700 ENSOANG00000039935 ENSOANG00000000173 ENSOANG00000046785 #20 ENSOANG00000042644 #21 ENSOANG00000040672 ENSOANG00000041683 #20 H1-2 (ENSOANG00000047788) ENSOANG00000042244 #22 H2AC7 (ENSOANG00000049037) ENSOANG00000040002 Platypus MODERN SPECIES 88 ENSOANG00000047921 H2AC21 (ENSOANG00000047209) ENSOANG00000040609 ENSOANG00000040358 ENSOANG00000044699 #20 ENSOANG00000049942 ENSOANG00000038271 ENSOANG00000044997 #21 ENSOANG00000048954 #22 ENSOANG00000047517 #21 ENSOANG00000038547 #20 ENSOANG00000049432 ENSOANG00000038871 #21 ENSOANG00000040002 H2AC7 (ENSOANG00000049037) ENSOANG00000042244 #22 H1-2 (ENSOANG00000047788) ENSOANG00000041683 #20 ENSOANG00000040672 ENSOANG00000042644 #21 ENSOANG00000046785 #20 ENSOANG00000000173 ENSOANG00000039935 ENSOANG00000045700 ENSOANG00000038387 ENSOANG00000045094 ENSOANG00000051301 #18 ENSOANG00000037825 #21 ENSOANG00000045607 #22 ENSOANG00000037816 ENSOANG00000047142