Tetrapoda ANCESTRAL SPECIES 37 ENSGT00440000037341.b.b ENSGT00940000161445 ENSGT00390000014682 ENSGT00390000014139 ENSGT00940000161057 ENSGT00940000158344.b ENSGT00390000002548 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000161901 ENSGT00940000159256 ENSGT00390000017267 ENSGT01090000260005.a.b.a.b.b ENSGT01100000263504.a.b.a.a #22 ENSGT00940000171204 ENSGT01100000263504.a.b.a.b.a.b ##35 ENSGT00940000161634 ENSGT00940000160281 ENSGT00940000160500 ENSGT00940000161895 ENSGT00530000063174.b ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000161428 ENSGT00940000160457 ENSGT00390000015495 ENSGT00940000157823 ENSGT00940000155454 ENSGT00940000160232 Amniota ANCESTRAL SPECIES 12 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00940000170165 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000007971 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ##31 Mammalia ANCESTRAL SPECIES 21 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000170136 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000181148 ENSGT00940000155738 ENSGT00550000074902 Theria ANCESTRAL SPECIES 9 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000170136 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000181148 ENSGT00940000155738 ENSGT00550000074902 Eutheria ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 ENSGT00950000183142.a.b.a.b #36 Laurasiatheria ANCESTRAL SPECIES 28 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00910000148060 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00910000148060 Artiodactyla ANCESTRAL SPECIES 25 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 Artiodactyla_a ANCESTRAL SPECIES 26 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00910000148060 Artiodactyla_b ANCESTRAL SPECIES 26 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00910000148060 Pecora ANCESTRAL SPECIES 22 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c ENSGT00390000005861 Percora_a ANCESTRAL SPECIES 15 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c ENSGT00390000005861 Bovidae ANCESTRAL SPECIES 15 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.tb #18 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.ub #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c ENSGT00390000005861 Caprinae ANCESTRAL SPECIES 1 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Rambouillet Sheep MODERN SPECIES 3 ENSOARG00020016393 #7 CNIH3 (ENSOARG00020016440) #8 DNAH14 (ENSOARG00020016617) #9 ENSOARG00020017311 #10 LBR (ENSOARG00020017338) #11 ENAH (ENSOARG00020017437) #12 ENSOARG00020018058 #13 ENSOARG00020018102 #14 SRP9 (ENSOARG00020018121) #15 EPHX1 (ENSOARG00020018225) #16 TMEM63A (ENSOARG00020018308) #17 ENSOARG00020018411 #18 PYCR2 (ENSOARG00020018457) #19 ENSOARG00020018575 #20 SDE2 (ENSOARG00020018625) #21 H3F3A (ENSOARG00020018672) #22 ACBD3 (ENSOARG00020018756) #23 MIXL1 (ENSOARG00020018842) #24 LIN9 (ENSOARG00020018902) #25 PARP1 (ENSOARG00020019277) #26 STUM (ENSOARG00020019418) #27 ITPKB (ENSOARG00020019465) #28 PSEN2 (ENSOARG00020019535) #29 COQ8A (ENSOARG00020019681) #30 CDC42BPA (ENSOARG00020019926) #31 AHCTF1 (ENSOARG00020003268) #32 ENSOARG00020003724 #33 SCCPDH (ENSOARG00020003810) #34 ENSOARG00020003854 #35 TFB2M (ENSOARG00020003896) #36 SMYD3 (ENSOARG00020003928) #37 Goat MODERN SPECIES 10 EXOC7 (ENSCHIG00000010786) GALR2 (ENSCHIG00000017151) SRP68 (ENSCHIG00000009842) ENSCHIG00000026103 CDK3 (ENSCHIG00000019794) TEN1 (ENSCHIG00000009483) ENSCHIG00000014913 ACOX1 (ENSCHIG00000021549) FBF1 (ENSCHIG00000023306) MRPL38 (ENSCHIG00000016277) TRIM65 (ENSCHIG00000022135) TRIM47 (ENSCHIG00000016592) WBP2 (ENSCHIG00000025622) UNC13D (ENSCHIG00000023322) UNK (ENSCHIG00000015385) ENSCHIG00000023303 #22 GALK1 (ENSCHIG00000004957) ITGB4 (ENSCHIG00000005571) SAP30BP (ENSCHIG00000021087) RECQL5 (ENSCHIG00000009742) SMIM5 (ENSCHIG00000025984) ENSCHIG00000026451 ENSCHIG00000019066 LLGL2 (ENSCHIG00000013481) TSEN54 (ENSCHIG00000019908) CASKIN2 (ENSCHIG00000021700) TMEM94 (ENSCHIG00000013867) GRB2 (ENSCHIG00000016061) SLC25A19 (ENSCHIG00000004195) MIF4GD (ENSCHIG00000006682) MRPS7 (ENSCHIG00000026974) Bovinae ANCESTRAL SPECIES 12 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.tb #18 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.ub #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT01100000263474.a.b.b.e.a.b.a ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c Bos ANCESTRAL SPECIES 12 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.tb #18 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.ub #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058.l #26 ENSGT01100000263474.a.b.b.e.a.b.a ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c Bos_a ANCESTRAL SPECIES 8 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.tb #18 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.ub #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058.l #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT01100000263504.a.b.b.b.b #35 ENSGT00940000155028.q.a.c ENSGT00390000005861 Wild yak DUPLICATION Wild yak MODERN SPECIES 1666 DSPP (ENSBMUG00000025197) SPARCL1 (ENSBMUG00000025191) NUDT9 (ENSBMUG00000025184) HSD17B11 (ENSBMUG00000025178) HSD17B13 (ENSBMUG00000025176) ENSBMUG00000025168 #22 KLHL8 (ENSBMUG00000025163) AFF1 (ENSBMUG00000025155) Wild yak MODERN SPECIES 1893 PYCR2 (ENSBMUG00000015566) #19 ENSBMUG00000015525 #20 SDE2 (ENSBMUG00000015514) #21 ENSBMUG00000015502 #22 ACBD3 (ENSBMUG00000015476) #23 MIXL1 (ENSBMUG00000015459) #24 LIN9 (ENSBMUG00000015437) #25 ENSBMUG00000014506 #26 Camelidae ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Alpaca MODERN SPECIES 4801 ENSVPAG00000005851 #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Laurasiatheria_c ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Chiroptera ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Microchiroptera ANCESTRAL SPECIES ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Microbat MODERN SPECIES 1419 ACOX1 (ENSMLUG00000001210) FBF1 (ENSMLUG00000001196) MRPL38 (ENSMLUG00000006296) ENSMLUG00000006291 TRIM47 (ENSMLUG00000014887) UNK (ENSMLUG00000015453) ENSMLUG00000015447 #22 GALK1 (ENSMLUG00000015425) ITGB4 (ENSMLUG00000015402) SAP30BP (ENSMLUG00000015391) RECQL5 (ENSMLUG00000015374) ENSMLUG00000015365 LLGL2 (ENSMLUG00000015307) TSEN54 (ENSMLUG00000015298) CASKIN2 (ENSMLUG00000015284) TMEM94 (ENSMLUG00000015265) GRB2 (ENSMLUG00000015262) SLC25A19 (ENSMLUG00000015251) MIF4GD (ENSMLUG00000015242) MRPS7 (ENSMLUG00000015237) GGA3 (ENSMLUG00000015225) NUP85 (ENSMLUG00000015211) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 15 ASIP (ENSRFEG00010007692) AHCY (ENSRFEG00010007632) ITCH (ENSRFEG00010007315) MAP1LC3A (ENSRFEG00010007180) PIGU (ENSRFEG00010007108) TP53INP2 (ENSRFEG00010007077) NCOA6 (ENSRFEG00010006952) GGT7 (ENSRFEG00010006853) ACSS2 (ENSRFEG00010006759) GSS (ENSRFEG00010006666) MYH7B (ENSRFEG00010006291) TRPC4AP (ENSRFEG00010006148) EDEM2 (ENSRFEG00010006007) PROCR (ENSRFEG00010019162) MMP24 (ENSRFEG00010019093) ENSRFEG00010019080 #22 EIF6 (ENSRFEG00010019027) FAM83C (ENSRFEG00010018993) UQCC1 (ENSRFEG00010018830) GDF5 (ENSRFEG00010018734) CEP250 (ENSRFEG00010018666) C20orf173 (ENSRFEG00010018613) ERGIC3 (ENSRFEG00010018538) ENSRFEG00010018119 SPAG4 (ENSRFEG00010017962) CPNE1 (ENSRFEG00010017487) NFS1 (ENSRFEG00010017113) BT_r333_jsm650C3f (ENSRFEG00010017053) ENSRFEG00010017015 RBM39 (ENSRFEG00010016851) PHF20 (ENSRFEG00010016802) Greater horseshoe bat MODERN SPECIES 21 RSPO3 (ENSRFEG00010000629) RNF146 (ENSRFEG00010000661) ECHDC1 (ENSRFEG00010000716) KIAA0408 (ENSRFEG00010000751) SOGA3 (ENSRFEG00010000772) C6orf58 (ENSRFEG00010000795) THEMIS (ENSRFEG00010000809) PTPRK (ENSRFEG00010000904) ENSRFEG00010001147 ENSRFEG00010001167 LAMA2 (ENSRFEG00010001231) ARHGAP18 (ENSRFEG00010001288) L3MBTL3 (ENSRFEG00010001369) SAMD3 (ENSRFEG00010001420) TMEM200A (ENSRFEG00010001439) ENSRFEG00010001446 #22 SMLR1 (ENSRFEG00010001459) EPB41L2 (ENSRFEG00010001686) AKAP7 (ENSRFEG00010002254) ENSRFEG00010002394 ARG1 (ENSRFEG00010002426) MED23 (ENSRFEG00010002484) ENPP3 (ENSRFEG00010002657) ENPP1 (ENSRFEG00010002710) CTGF (ENSRFEG00010002751) ENSRFEG00010002771 MOXD1 (ENSRFEG00010002794) STX7 (ENSRFEG00010002842) TAAR9 (ENSRFEG00010002902) ENSRFEG00010002913 ENSRFEG00010002933 Carnivora ANCESTRAL SPECIES 14 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Caniformia ANCESTRAL SPECIES 10 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Caniformia_b ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Ursidae ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Giant Panda MODERN SPECIES 1005 ENSAMEG00000025127 #22 Canidae ANCESTRAL SPECIES 1 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00950000182891.a.a.b.a.a.a.b.a.a.x.a ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Canis_lupus ANCESTRAL SPECIES 4 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00950000182891.a.a.b.a.a.a.b.a.a.x.a ENSGT00950000183123.g.a.a.b ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000000411.g.b ENSGT01030000238203 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT00390000018900 #32 ENSGT00940000178689 ENSGT00950000183029.B.c.b.b.b.i.b ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 Dog MODERN SPECIES 35 WDR26 (ENSCAFG00845012382) CNIH3 (ENSCAFG00845012278) #8 ENSCAFG00845012260 ENSCAFG00845012247 DNAH14 (ENSCAFG00845011498) #9 LBR (ENSCAFG00845010980) #11 ENAH (ENSCAFG00845009892) #13 SRP9 (ENSCAFG00845009505) #15 EPHX1 (ENSCAFG00845009397) #16 TMEM63A (ENSCAFG00845009155) #17 ENSCAFG00845009114 #20 PYCR2 (ENSCAFG00845009034) #19 ENSCAFG00845009009 ENSCAFG00845008972 #20 SDE2 (ENSCAFG00845008939) #21 ENSCAFG00845008917 #22 ACBD3 (ENSCAFG00845008884) #23 ENSCAFG00845008860 MIXL1 (ENSCAFG00845008836) #24 LIN9 (ENSCAFG00845008477) #25 PARP1 (ENSCAFG00845008325) #26 STUM (ENSCAFG00845008283) #27 ITPKB (ENSCAFG00845008212) #28 PSEN2 (ENSCAFG00845008023) #29 COQ8A (ENSCAFG00845007817) #30 ENSCAFG00845007754 CDC42BPA (ENSCAFG00845007016) #31 AHCTF1 (ENSCAFG00845006427) #32 ENSCAFG00845006225 #33 ENSCAFG00845006160 SCCPDH (ENSCAFG00845006130) #34 Red fox MODERN SPECIES 45 DEGS1 (ENSVVUG00000003871) NVL (ENSVVUG00000003759) CNIH4 (ENSVVUG00000003749) ##8 WDR26 (ENSVVUG00000002391) ENSVVUG00000002268 ENSVVUG00000002263 ENSVVUG00000002178 #9 ENSVVUG00000002137 #9 LBR (ENSVVUG00000002114) #11 ENSVVUG00000002093 #13 SRP9 (ENSVVUG00000002065) #15 EPHX1 (ENSVVUG00000002017) #16 TMEM63A (ENSVVUG00000001946) #17 PYCR2 (ENSVVUG00000001865) #19 SDE2 (ENSVVUG00000001852) #21 ENSVVUG00000001818 #22 ACBD3 (ENSVVUG00000001698) #23 ENSVVUG00000001692 #24 LIN9 (ENSVVUG00000001682) #25 PARP1 (ENSVVUG00000001655) #26 STUM (ENSVVUG00000001575) #27 ITPKB (ENSVVUG00000001558) #28 PSEN2 (ENSVVUG00000001510) #29 COQ8A (ENSVVUG00000001434) #30 ENSVVUG00000001391 CDC42BPA (ENSVVUG00000001137) #31 AHCTF1 (ENSVVUG00000000955) #32 SCCPDH (ENSVVUG00000000879) #34 CNST (ENSVVUG00000000780) ENSVVUG00000000650 #36 ENSVVUG00000000542 #37 Felidae ANCESTRAL SPECIES 11 ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Panthera ANCESTRAL SPECIES 22 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Panthera_a ANCESTRAL SPECIES 25 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 leopard MODERN SPECIES 48 EXOC7 (ENSPPRG00000022218) ZACN (ENSPPRG00000005339) GALR2 (ENSPPRG00000004457) SRP68 (ENSPPRG00000004278) ENSPPRG00000002492 CDK3 (ENSPPRG00000022805) TEN1 (ENSPPRG00000023117) ACOX1 (ENSPPRG00000023330) FBF1 (ENSPPRG00000023680) MRPL38 (ENSPPRG00000013859) TRIM65 (ENSPPRG00000013032) TRIM47 (ENSPPRG00000012820) WBP2 (ENSPPRG00000012059) UNC13D (ENSPPRG00000010231) UNK (ENSPPRG00000008948) ENSPPRG00000008892 #22 GALK1 (ENSPPRG00000008039) ITGB4 (ENSPPRG00000007492) SAP30BP (ENSPPRG00000005238) RECQL5 (ENSPPRG00000004541) ENSPPRG00000003260 SMIM6 (ENSPPRG00000016437) SMIM5 (ENSPPRG00000001878) ENSPPRG00000001524 LLGL2 (ENSPPRG00000011496) TSEN54 (ENSPPRG00000009162) CASKIN2 (ENSPPRG00000008893) TMEM94 (ENSPPRG00000007619) GRB2 (ENSPPRG00000004519) SLC25A19 (ENSPPRG00000003012) MIF4GD (ENSPPRG00000001215) lion DUPLICATION lion MODERN SPECIES 17 TP53BP2 (ENSPLOG00000021069) FBXO28 (ENSPLOG00000021127) DEGS1 (ENSPLOG00000021159) NVL (ENSPLOG00000021217) CNIH4 (ENSPLOG00000021368) ##8 WDR26 (ENSPLOG00000021417) CNIH3 (ENSPLOG00000021466) #8 DNAH14 (ENSPLOG00000021571) #9 LBR (ENSPLOG00000005582) #11 ENAH (ENSPLOG00000005749) #13 SRP9 (ENSPLOG00000005890) #15 EPHX1 (ENSPLOG00000005936) #16 TMEM63A (ENSPLOG00000006070) #17 PYCR2 (ENSPLOG00000006197) #19 SDE2 (ENSPLOG00000006268) #21 ENSPLOG00000006310 #22 ACBD3 (ENSPLOG00000006338) #23 LIN9 (ENSPLOG00000006364) #25 PARP1 (ENSPLOG00000006420) #26 STUM (ENSPLOG00000006487) #27 ITPKB (ENSPLOG00000006512) #28 PSEN2 (ENSPLOG00000006537) #29 COQ8A (ENSPLOG00000006581) #30 CDC42BPA (ENSPLOG00000006680) #31 AHCTF1 (ENSPLOG00000006807) #32 ENSPLOG00000007118 #33 SCCPDH (ENSPLOG00000007254) #34 CNST (ENSPLOG00000007297) TFB2M (ENSPLOG00000007355) #36 SMYD3 (ENSPLOG00000007373) #37 KIF26B (ENSPLOG00000007502) lion MODERN SPECIES 14 EXOC7 (ENSPLOG00000008501) ZACN (ENSPLOG00000008665) GALR2 (ENSPLOG00000008737) SRP68 (ENSPLOG00000008793) ENSPLOG00000008941 CDK3 (ENSPLOG00000009238) TEN1 (ENSPLOG00000009295) ACOX1 (ENSPLOG00000009370) FBF1 (ENSPLOG00000009657) MRPL38 (ENSPLOG00000010033) TRIM65 (ENSPLOG00000010056) TRIM47 (ENSPLOG00000010086) WBP2 (ENSPLOG00000010195) UNC13D (ENSPLOG00000010330) UNK (ENSPLOG00000010594) ENSPLOG00000010634 #22 ENSPLOG00000010696 ITGB4 (ENSPLOG00000010837) SAP30BP (ENSPLOG00000011693) RECQL5 (ENSPLOG00000011958) SMIM6 (ENSPLOG00000012155) SMIM5 (ENSPLOG00000012170) ENSPLOG00000012316 LLGL2 (ENSPLOG00000013411) TSEN54 (ENSPLOG00000013461) CASKIN2 (ENSPLOG00000013587) TMEM94 (ENSPLOG00000014091) GRB2 (ENSPLOG00000014679) SLC25A19 (ENSPLOG00000014750) MIF4GD (ENSPLOG00000014790) MRPS7 (ENSPLOG00000014877) Eulipotyphla ANCESTRAL SPECIES 567 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b Hedgehog MODERN SPECIES 2920 ENSEEUG00000015682 #22 GALK1 (ENSEEUG00000015670) ITGB4 (ENSEEUG00000015501) Euarchontoglires ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 Primates ANCESTRAL SPECIES 7 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.a.yb ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Bushbaby MODERN SPECIES 299 SDC3 (ENSOGAG00000031276) PUM1 (ENSOGAG00000011063) NKAIN1 (ENSOGAG00000004537) ENSOGAG00000004538 ZCCHC17 (ENSOGAG00000013749) FABP3 (ENSOGAG00000013757) PGAM1 (ENSOGAG00000027180) SERINC2 (ENSOGAG00000013759) TINAGL1 (ENSOGAG00000004594) HCRTR1 (ENSOGAG00000004595) PEF1 (ENSOGAG00000004597) COL16A1 (ENSOGAG00000004599) ADGRB2 (ENSOGAG00000006787) SPOCD1 (ENSOGAG00000016702) PTP4A2 (ENSOGAG00000029603) ENSOGAG00000026969 #22 KHDRBS1 (ENSOGAG00000004582) ENSOGAG00000004583 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Lemuriformes_a ANCESTRAL SPECIES 18 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Coquerels sifaka MODERN SPECIES 892 EXOC7 (ENSPCOG00000028217) ZACN (ENSPCOG00000016757) GALR2 (ENSPCOG00000014187) SRP68 (ENSPCOG00000026772) EVPL (ENSPCOG00000013688) CDK3 (ENSPCOG00000023342) TEN1 (ENSPCOG00000025329) ACOX1 (ENSPCOG00000022848) FBF1 (ENSPCOG00000023624) MRPL38 (ENSPCOG00000028871) TRIM65 (ENSPCOG00000027183) TRIM47 (ENSPCOG00000026132) WBP2 (ENSPCOG00000012493) UNC13D (ENSPCOG00000026684) UNK (ENSPCOG00000027411) ENSPCOG00000022673 #22 GALK1 (ENSPCOG00000019252) ITGB4 (ENSPCOG00000025620) SAP30BP (ENSPCOG00000018378) SMIM5 (ENSPCOG00000005213) RECQL5 (ENSPCOG00000000050) ENSPCOG00000026940 LLGL2 (ENSPCOG00000020994) TSEN54 (ENSPCOG00000027880) CASKIN2 (ENSPCOG00000013857) TMEM94 (ENSPCOG00000023796) GRB2 (ENSPCOG00000020735) SLC25A19 (ENSPCOG00000028872) MIF4GD (ENSPCOG00000026945) MRPS7 (ENSPCOG00000014568) GGA3 (ENSPCOG00000028689) Haplorrhini ANCESTRAL SPECIES 7 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 Tarsier MODERN SPECIES 2493 ENSTSYG00000036227 #22 Simiiformes ANCESTRAL SPECIES 8 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 Catarrhini ANCESTRAL SPECIES 10 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00940000153272.a.b.o.b.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00910000148176 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 ENSGT00940000160510 Hominoidea ANCESTRAL SPECIES 7 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00940000153272.a.b.o.b.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.q.b #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.q.a #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00940000157177.i.b ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00940000154251.A.a.a.a ENSGT00910000147389 ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a Hominidae ANCESTRAL SPECIES 6 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.q.b #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.q.a #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00940000157177.i.b ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00940000154251.A.a.a.a ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a Orangutan MODERN SPECIES CNIH4 (ENSPPYG00000040381) ##8 WDR26 (ENSPPYG00000000182) ENSPPYG00000002704 CNIH3 (ENSPPYG00000000181) #8 DNAH14 (ENSPPYG00000039314) #9 LBR (ENSPPYG00000000176) #11 ENSPPYG00000000175 #13 SRP9 (ENSPPYG00000000174) #15 ENSPPYG00000000173 #16 EPHX1 (ENSPPYG00000039616) #16 TMEM63A (ENSPPYG00000029911) #17 LEFTY1 (ENSPPYG00000033926) #20 PYCR2 (ENSPPYG00000000171) #19 LEFTY2 (ENSPPYG00000030151) #20 SDE2 (ENSPPYG00000000169) #21 ENSPPYG00000000168 #22 ENSPPYG00000032085 ACBD3 (ENSPPYG00000029541) #23 MIXL1 (ENSPPYG00000000166) #24 ENSPPYG00000000165 #25 PARP1 (ENSPPYG00000000164) #26 STUM (ENSPPYG00000000162) #27 ITPKB (ENSPPYG00000000161) #28 PSEN2 (ENSPPYG00000000160) #29 COQ8A (ENSPPYG00000000159) #30 CDC42BPA (ENSPPYG00000000158) #31 ENSPPYG00000000155 JMJD4 (ENSPPYG00000000154) SNAP47 (ENSPPYG00000000153) PRSS38 (ENSPPYG00000000152) WNT9A (ENSPPYG00000000151) Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.q.b #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.q.a #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00940000157177.i.b ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00940000154251.A.a.a.a ENSGT00940000159380 ENSGT00910000147389 ENSGT00950000182843.b ENSGT00940000154494.a Gorilla MODERN SPECIES 4 ENSGGOG00000022544 PCDH17 (ENSGGOG00000038108) ENSGGOG00000039321 DIAPH3 (ENSGGOG00000001745) ENSGGOG00000028580 TDRD3 (ENSGGOG00000025560) ENSGGOG00000039777 ENSGGOG00000038146 PCDH20 (ENSGGOG00000005530) ENSGGOG00000022721 ENSGGOG00000041716 PCDH9 (ENSGGOG00000004371) ENSGGOG00000038927 KLHL1 (ENSGGOG00000015147) DACH1 (ENSGGOG00000004058) ENSGGOG00000009197 #22 MZT1 (ENSGGOG00000039307) BORA (ENSGGOG00000004468) DIS3 (ENSGGOG00000006630) PIBF1 (ENSGGOG00000011491) KLF5 (ENSGGOG00000003245) ENSGGOG00000010447 KLF12 (ENSGGOG00000004142) ENSGGOG00000023270 TBC1D4 (ENSGGOG00000015734) ENSGGOG00000008976 UCHL3 (ENSGGOG00000015683) LMO7 (ENSGGOG00000012590) ENSGGOG00000026015 ENSGGOG00000037865 ACOD1 (ENSGGOG00000014878) Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A.c ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000165228 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000161656.r ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Pan ANCESTRAL SPECIES 3 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A.c ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000165228 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000161656.r ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Bonobo MODERN SPECIES 8 EXOC7 (ENSPPAG00000038827) ZACN (ENSPPAG00000036441) GALR2 (ENSPPAG00000031083) SRP68 (ENSPPAG00000029018) EVPL (ENSPPAG00000028982) CDK3 (ENSPPAG00000038619) TEN1 (ENSPPAG00000043907) ACOX1 (ENSPPAG00000036022) FBF1 (ENSPPAG00000042628) MRPL38 (ENSPPAG00000043735) ENSPPAG00000035634 TRIM47 (ENSPPAG00000028112) WBP2 (ENSPPAG00000003545) UNC13D (ENSPPAG00000018143) UNK (ENSPPAG00000032800) ENSPPAG00000037659 #22 GALK1 (ENSPPAG00000025985) ITGB4 (ENSPPAG00000017376) SAP30BP (ENSPPAG00000029956) SMIM6 (ENSPPAG00000006693) SMIM5 (ENSPPAG00000035228) RECQL5 (ENSPPAG00000034423) MYO15B (ENSPPAG00000025068) LLGL2 (ENSPPAG00000028840) TSEN54 (ENSPPAG00000043519) CASKIN2 (ENSPPAG00000033859) TMEM94 (ENSPPAG00000043879) ENSPPAG00000000113 GRB2 (ENSPPAG00000028137) SLC25A19 (ENSPPAG00000036265) MIF4GD (ENSPPAG00000019610) Chimpanzee MODERN SPECIES DEGS1 (ENSPTRG00000002023) NVL (ENSPTRG00000046422) CNIH4 (ENSPTRG00000002025) ##8 WDR26 (ENSPTRG00000002026) CNIH3 (ENSPTRG00000002027) #8 DNAH14 (ENSPTRG00000050408) #9 LBR (ENSPTRG00000002036) #11 ENAH (ENSPTRG00000002037) #13 SRP9 (ENSPTRG00000002038) #15 EPHX1 (ENSPTRG00000002039) #16 TMEM63A (ENSPTRG00000002040) #17 LEFTY1 (ENSPTRG00000049763) #20 PYCR2 (ENSPTRG00000002042) #19 LEFTY2 (ENSPTRG00000002043) #20 SDE2 (ENSPTRG00000002044) #21 H3-3A (ENSPTRG00000002045) #22 ACBD3 (ENSPTRG00000002046) #23 MIXL1 (ENSPTRG00000049290) #24 LIN9 (ENSPTRG00000002048) #25 PARP1 (ENSPTRG00000002049) #26 ENSPTRG00000043266 STUM (ENSPTRG00000030135) #27 ITPKB (ENSPTRG00000002051) #28 PSEN2 (ENSPTRG00000002052) #29 COQ8A (ENSPTRG00000033741) #30 CDC42BPA (ENSPTRG00000042934) #31 ZNF678 (ENSPTRG00000002057) JMJD4 (ENSPTRG00000002059) ENSPTRG00000048948 SNAP47 (ENSPTRG00000002060) PRSS38 (ENSPTRG00000002061) Gibbon DUPLICATION Gibbon MODERN SPECIES 23 GBA2 (ENSNLEG00000004159) CREB3 (ENSNLEG00000004179) TLN1 (ENSNLEG00000004224) TPM2 (ENSNLEG00000004274) CA9 (ENSNLEG00000031756) ARHGEF39 (ENSNLEG00000004351) CCDC107 (ENSNLEG00000004365) SIT1 (ENSNLEG00000032199) CD72 (ENSNLEG00000034608) TESK1 (ENSNLEG00000031377) ENSNLEG00000004511 RUSC2 (ENSNLEG00000004449) ENSNLEG00000032146 UNC13B (ENSNLEG00000004514) ENSNLEG00000018373 ENSNLEG00000032255 #22 ATOSB (ENSNLEG00000004530) STOML2 (ENSNLEG00000004539) PIGO (ENSNLEG00000004616) FANCG (ENSNLEG00000004654) VCP (ENSNLEG00000004704) C9orf131 (ENSNLEG00000004743) DNAJB5 (ENSNLEG00000029383) ENSNLEG00000004754 ENSNLEG00000034908 ENSNLEG00000034510 ENSNLEG00000033475 ENSNLEG00000035392 CCL21 (ENSNLEG00000004768) ENSNLEG00000004787 GALT (ENSNLEG00000004796) Gibbon MODERN SPECIES 20 NVL (ENSNLEG00000013437) ENSNLEG00000032458 ##8 WDR26 (ENSNLEG00000013555) ENSNLEG00000033301 CNIH3 (ENSNLEG00000032625) #8 ENSNLEG00000013644 LBR (ENSNLEG00000027476) #11 ENSNLEG00000013693 #13 SRP9 (ENSNLEG00000013740) #15 EPHX1 (ENSNLEG00000013747) #16 TMEM63A (ENSNLEG00000013755) #17 LEFTY1 (ENSNLEG00000036199) #20 PYCR2 (ENSNLEG00000026763) #19 ENSNLEG00000013769 #20 SDE2 (ENSNLEG00000013788) #21 ENSNLEG00000013798 #22 ACBD3 (ENSNLEG00000034130) #23 MIXL1 (ENSNLEG00000032618) #24 LIN9 (ENSNLEG00000013837) #25 PARP1 (ENSNLEG00000013905) #26 ENSNLEG00000032044 ENSNLEG00000013913 #27 ITPKB (ENSNLEG00000013915) #28 PSEN2 (ENSNLEG00000013924) #29 COQ8A (ENSNLEG00000013937) #30 CDC42BPA (ENSNLEG00000013980) #31 ZNF678 (ENSNLEG00000008917) ENSNLEG00000031801 JMJD4 (ENSNLEG00000032639) SNAP47 (ENSNLEG00000014097) PRSS38 (ENSNLEG00000014112) Cercopithecidae ANCESTRAL SPECIES 20 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00940000153272.a.b.o.b.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.o #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.p #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00910000148176 ENSGT00940000153165.a.a.d.i.a ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 Cercopithecinae ANCESTRAL SPECIES 18 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00940000153272.a.b.o.b.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.o #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.p #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT01090000260030.b ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 Vervet Monkey MODERN SPECIES 203 SYP (ENSCSAG00000012877) ENSCSAG00000012869 CCDC22 (ENSCSAG00000012858) FOXP3 (ENSCSAG00000012845) PPP1R3F (ENSCSAG00000012839) ENSCSAG00000012831 ENSCSAG00000012821 PAGE1 (ENSCSAG00000012814) PAGE4 (ENSCSAG00000012798) USP27X (ENSCSAG00000000130) CLCN5 (ENSCSAG00000012790) AKAP4 (ENSCSAG00000012776) CCNB3 (ENSCSAG00000012755) DGKK (ENSCSAG00000012745) SHROOM4 (ENSCSAG00000012729) ENSCSAG00000000129 #22 BMP15 (ENSCSAG00000012723) ENSCSAG00000012719 ENSCSAG00000012705 EZHIP (ENSCSAG00000012701) ENSCSAG00000012692 ENSCSAG00000000128 ENSCSAG00000000127 GSPT2 (ENSCSAG00000000126) MAGED1 (ENSCSAG00000012685) ENSCSAG00000012678 ENSCSAG00000012672 ENSCSAG00000012666 ENSCSAG00000012657 XAGE2 (ENSCSAG00000012647) GPR173 (ENSCSAG00000000125) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00940000153272.a.b.o.b.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.o #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.p #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c.l.b ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT01090000260030.b ENSGT00940000159380 ENSGT00950000182843.b ENSGT00910000148086 ENSGT00940000154494.a Cercopithecinae_b ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Olive baboon MODERN SPECIES 19 ETFBKMT (ENSPANG00000048959) AMN1 (ENSPANG00000025713) RESF1 (ENSPANG00000009884) BICD1 (ENSPANG00000004473) FGD4 (ENSPANG00000021903) DNM1L (ENSPANG00000017980) YARS2 (ENSPANG00000015833) PKP2 (ENSPANG00000009883) SYT10 (ENSPANG00000018998) ENSPANG00000006000 CPNE8 (ENSPANG00000013195) KIF21A (ENSPANG00000017444) ABCD2 (ENSPANG00000015335) C12orf40 (ENSPANG00000018245) SLC2A13 (ENSPANG00000019087) HIST1H3A (ENSPANG00000037957) #22 LRRK2 (ENSPANG00000010275) ENSPANG00000044765 ENSPANG00000047329 CNTN1 (ENSPANG00000022088) PDZRN4 (ENSPANG00000007816) ENSPANG00000049095 GXYLT1 (ENSPANG00000022965) PPHLN1 (ENSPANG00000009967) ENSPANG00000042854 ENSPANG00000038616 ENSPANG00000048843 ZCRB1 (ENSPANG00000010274) PRICKLE1 (ENSPANG00000005856) ADAMTS20 (ENSPANG00000015479) ENSPANG00000044997 Macaca ANCESTRAL SPECIES ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.o #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.p #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT01030000238203 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT01090000260030.b ENSGT00940000159380 ENSGT00950000182843.b ENSGT00910000148086 ENSGT00940000154494.a ENSGT00940000159618 Macaca_a ANCESTRAL SPECIES ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00940000173703 ENSGT00390000018505.a.a ##15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.o #20 ENSGT00390000010056.p #20 ENSGT00950000183044.a.a.a.c.d #19 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT01040000240755.A.b.b.a ENSGT00530000063651.a #23 ENSGT00950000183105.B.a.a.b ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000161627.a.b.a.a.b ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT01090000260030.b ENSGT00940000159380 ENSGT00950000182843.b Crab-eating macaque MODERN SPECIES ENSMFAG00000003807 FBXO28 (ENSMFAG00000000604) DEGS1 (ENSMFAG00000039054) NVL (ENSMFAG00000003164) CNIH4 (ENSMFAG00000003700) ##8 WDR26 (ENSMFAG00000036710) CNIH3 (ENSMFAG00000039040) #8 DNAH14 (ENSMFAG00000036618) #9 LBR (ENSMFAG00000034066) #11 ENAH (ENSMFAG00000019058) #13 SRP9 (ENSMFAG00000002641) #15 ENSMFAG00000051570 ENSMFAG00000039504 #20 ENSMFAG00000031760 #19 SDE2 (ENSMFAG00000031291) #21 ENSMFAG00000045269 #22 ENSMFAG00000050027 ENSMFAG00000048787 ACBD3 (ENSMFAG00000045670) #23 ENSMFAG00000051300 ENSMFAG00000027604 LIN9 (ENSMFAG00000001110) #25 ENSMFAG00000062286 PARP1 (ENSMFAG00000002526) #26 STUM (ENSMFAG00000035398) #27 ITPKB (ENSMFAG00000035876) #28 ENSMFAG00000053714 ENSMFAG00000054654 PSEN2 (ENSMFAG00000000107) #29 COQ8A (ENSMFAG00000045043) #30 CDC42BPA (ENSMFAG00000036131) #31 Rhesus MODERN SPECIES TEX50 (ENSMMUG00000052807) KLHL20 (ENSMMUG00000016792) CENPL (ENSMMUG00000008572) DARS2 (ENSMMUG00000022798) ZBTB37 (ENSMMUG00000022801) SERPINC1 (ENSMMUG00000000629) RC3H1 (ENSMMUG00000000630) ENSMMUG00000064770 RABGAP1L (ENSMMUG00000001565) CACYBP (ENSMMUG00000001571) MRPS14 (ENSMMUG00000051176) TNN (ENSMMUG00000000545) KIAA0040 (ENSMMUG00000000546) TNR (ENSMMUG00000015723) COP1 (ENSMMUG00000059669) ENSMMUG00000063647 #22 PAPPA2 (ENSMMUG00000023214) ASTN1 (ENSMMUG00000023216) BRINP2 (ENSMMUG00000022935) SEC16B (ENSMMUG00000020320) RASAL2 (ENSMMUG00000021073) ENSMMUG00000053325 CLEC20A (ENSMMUG00000056058) TEX35 (ENSMMUG00000054486) RALGPS2 (ENSMMUG00000017551) ANGPTL1 (ENSMMUG00000017553) FAM20B (ENSMMUG00000006260) TOR3A (ENSMMUG00000006261) ABL2 (ENSMMUG00000006262) ENSMMUG00000049630 SOAT1 (ENSMMUG00000003768) Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 432 EXOC7 (ENSMNEG00000034370) ZACN (ENSMNEG00000033868) GALR2 (ENSMNEG00000041199) SRP68 (ENSMNEG00000034783) EVPL (ENSMNEG00000033170) CDK3 (ENSMNEG00000028067) TEN1 (ENSMNEG00000030918) ACOX1 (ENSMNEG00000039353) FBF1 (ENSMNEG00000028846) MRPL38 (ENSMNEG00000025535) TRIM65 (ENSMNEG00000037740) TRIM47 (ENSMNEG00000040185) WBP2 (ENSMNEG00000042076) UNC13D (ENSMNEG00000023958) UNK (ENSMNEG00000036240) ENSMNEG00000028325 #22 GALK1 (ENSMNEG00000039872) ITGB4 (ENSMNEG00000036570) SAP30BP (ENSMNEG00000032576) SMIM5 (ENSMNEG00000032209) RECQL5 (ENSMNEG00000040154) MYO15B (ENSMNEG00000025709) LLGL2 (ENSMNEG00000028345) TSEN54 (ENSMNEG00000029199) CASKIN2 (ENSMNEG00000027134) TMEM94 (ENSMNEG00000031672) GRB2 (ENSMNEG00000036872) SLC25A19 (ENSMNEG00000036328) MIF4GD (ENSMNEG00000022755) MRPS7 (ENSMNEG00000022424) GGA3 (ENSMNEG00000042786) Pig-tailed macaque MODERN SPECIES 102 NVL (ENSMNEG00000042774) CNIH4 (ENSMNEG00000041190) ##8 WDR26 (ENSMNEG00000031309) CNIH3 (ENSMNEG00000035965) #8 ENSMNEG00000034880 ENSMNEG00000043544 #9 LBR (ENSMNEG00000008692) #11 ENAH (ENSMNEG00000033447) #13 SRP9 (ENSMNEG00000043512) #15 EPHX1 (ENSMNEG00000041552) #16 TMEM63A (ENSMNEG00000035779) #17 ENSMNEG00000035765 #20 PYCR2 (ENSMNEG00000033158) #19 ENSMNEG00000042256 #20 SDE2 (ENSMNEG00000038615) #21 ENSMNEG00000029530 #22 ACBD3 (ENSMNEG00000039320) #23 ENSMNEG00000041334 MIXL1 (ENSMNEG00000041606) #24 LIN9 (ENSMNEG00000038790) #25 PARP1 (ENSMNEG00000034074) #26 STUM (ENSMNEG00000036609) #27 ITPKB (ENSMNEG00000032813) #28 PSEN2 (ENSMNEG00000035904) #29 COQ8A (ENSMNEG00000037185) #30 CDC42BPA (ENSMNEG00000034215) #31 ENSMNEG00000033665 ZNF678 (ENSMNEG00000027914) JMJD4 (ENSMNEG00000044011) SNAP47 (ENSMNEG00000043435) ENSMNEG00000029686 Rhinopithecus ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Black snub-nosed monkey MODERN SPECIES 1685 ENSRBIG00000039333 TENM3 (ENSRBIG00000037111) DCTD (ENSRBIG00000044833) WWC2 (ENSRBIG00000040787) CDKN2AIP (ENSRBIG00000037956) ENSRBIG00000042448 ING2 (ENSRBIG00000010666) ENSRBIG00000005434 #22 RWDD4 (ENSRBIG00000036803) TRAPPC11 (ENSRBIG00000033668) STOX2 (ENSRBIG00000027490) ENPP6 (ENSRBIG00000025238) IRF2 (ENSRBIG00000039482) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3244 ILRUN (ENSRROG00000039638) SPDEF (ENSRROG00000030067) PACSIN1 (ENSRROG00000044346) ENSRROG00000011959 #22 ENSRROG00000030593 NUDT3 (ENSRROG00000019323) ENSRROG00000014514 ENSRROG00000027348 SMIM29 (ENSRROG00000030413) ENSRROG00000022352 GRM4 (ENSRROG00000035463) Golden snub-nosed monkey MODERN SPECIES 2065 SPRR2A (ENSRROG00000006815) ENSRROG00000026292 ENSRROG00000012379 ENSRROG00000001750 #22 SPRR2G (ENSRROG00000003366) Platyrrhini ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Cebidae ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Marmoset MODERN SPECIES 1 ENSCJAG00000074511 POLE2 (ENSCJAG00000017431) DNAAF2 (ENSCJAG00000047844) MGAT2 (ENSCJAG00000017412) ENSCJAG00000079121 LRR1 (ENSCJAG00000017394) ENSCJAG00000022603 ENSCJAG00000087039 ENSCJAG00000078416 ENSCJAG00000051936 ##7 ENSCJAG00000080762 MDGA2 (ENSCJAG00000017353) ENSCJAG00000072188 RPL10L (ENSCJAG00000076382) ENSCJAG00000074579 ENSCJAG00000077837 #22 ENSCJAG00000079332 MIS18BP1 (ENSCJAG00000015929) FANCM (ENSCJAG00000015945) FKBP3 (ENSCJAG00000015972) PRPF39 (ENSCJAG00000015991) TOGARAM1 (ENSCJAG00000016027) KLHL28 (ENSCJAG00000016063) C14orf28 (ENSCJAG00000016071) ENSCJAG00000074434 ENSCJAG00000062743 ENSCJAG00000078869 LRFN5 (ENSCJAG00000016083) ENSCJAG00000080619 ENSCJAG00000081847 ENSCJAG00000087323 Cebidae_a ANCESTRAL SPECIES 17 ENSGT00390000003595 ENSGT00920000149199 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00940000164172 ENSGT00550000074902 ENSGT00940000153432.A.a Capuchin MODERN SPECIES 93 ZACN (ENSCCAG00000019446) GALR2 (ENSCCAG00000024587) SRP68 (ENSCCAG00000025246) EVPL (ENSCCAG00000036868) CDK3 (ENSCCAG00000020947) TEN1 (ENSCCAG00000023058) ACOX1 (ENSCCAG00000030633) FBF1 (ENSCCAG00000001052) MRPL38 (ENSCCAG00000033197) TRIM65 (ENSCCAG00000028682) TRIM47 (ENSCCAG00000023282) ENSCCAG00000020665 WBP2 (ENSCCAG00000030687) UNC13D (ENSCCAG00000030815) UNK (ENSCCAG00000031100) ENSCCAG00000032331 #22 ITGB4 (ENSCCAG00000020437) GALK1 (ENSCCAG00000032984) SAP30BP (ENSCCAG00000022487) SMIM5 (ENSCCAG00000021103) RECQL5 (ENSCCAG00000031546) ENSCCAG00000033438 LLGL2 (ENSCCAG00000023729) TSEN54 (ENSCCAG00000036624) CASKIN2 (ENSCCAG00000027765) TMEM94 (ENSCCAG00000033322) GRB2 (ENSCCAG00000031864) SLC25A19 (ENSCCAG00000020105) ENSCCAG00000025391 GGA3 (ENSCCAG00000027478) NUP85 (ENSCCAG00000030795) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 ENSGT00950000183142.a.b.a.b #36 Glires ANCESTRAL SPECIES ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.b.a.b.c ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 ENSGT00950000183142.a.b.a.b #36 Rodentia ANCESTRAL SPECIES ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000160505 #9 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505.b #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.b.a.b.c.b ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00940000171704 ENSGT00950000183142.a.b.a.b #36 Rodentia_A ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Hystricomorpha ANCESTRAL SPECIES 29 ENSGT00950000183044.a.a.a.c.f #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00390000002089.a.b ENSGT00940000160954 ENSGT00940000154196.b ENSGT00940000155793 ENSGT00530000063629.a ENSGT00530000063876.a ENSGT00940000159420.b ENSGT00390000000709 ENSGT00940000157451 Hystricomorpha_a ANCESTRAL SPECIES 13 ENSGT00950000183044.a.a.a.c.f #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00390000002089.a.b ENSGT00940000160954 ENSGT00940000154196.b ENSGT00940000155793 ENSGT00530000063629.a ENSGT00530000063876.a ENSGT00940000159420.b ENSGT00390000000709 ENSGT00940000157451 Hystricomorpha_b ANCESTRAL SPECIES 4 ENSGT00950000183044.a.a.a.c.f #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00390000002089.a.b ENSGT00940000160954 ENSGT00940000154196.b ENSGT00940000155793 ENSGT00530000063629.a ENSGT00530000063876.a ENSGT00940000159420.b ENSGT00390000000709 ENSGT00940000157451 Long-tailed chinchilla MODERN SPECIES 196 PYCR2 (ENSCLAG00000002964) #19 ENSCLAG00000003115 #20 SDE2 (ENSCLAG00000003280) #21 ENSCLAG00000003662 #22 ACBD3 (ENSCLAG00000004643) #23 ENSCLAG00000005251 #24 LIN9 (ENSCLAG00000005536) #25 PARP1 (ENSCLAG00000006637) #26 STUM (ENSCLAG00000003663) #27 ITPKB (ENSCLAG00000004247) #28 ENSCLAG00000004308 TRAF5 (ENSCLAG00000005710) RCOR3 (ENSCLAG00000002506) KCNH1 (ENSCLAG00000003074) ENSCLAG00000003578 HHAT (ENSCLAG00000003158) ENSCLAG00000003749 SERTAD4 (ENSCLAG00000003962) SYT14 (ENSCLAG00000002869) Guinea pig MODERN SPECIES 137 PYCR2 (ENSCPOG00000005663) #19 ENSCPOG00000014755 #20 SDE2 (ENSCPOG00000014756) #21 ENSCPOG00000025231 ENSCPOG00000039202 #22 ACBD3 (ENSCPOG00000007184) #23 LIN9 (ENSCPOG00000015642) #25 PARP1 (ENSCPOG00000015643) #26 STUM (ENSCPOG00000031019) #27 ITPKB (ENSCPOG00000013483) #28 RD3 (ENSCPOG00000022572) PPP1R3C (ENSCPOG00000038237) HECTD2 (ENSCPOG00000008922) PCGF5 (ENSCPOG00000013156) ANKRD1 (ENSCPOG00000002565) RPP30 (ENSCPOG00000033174) HTR7 (ENSCPOG00000007482) Rodentia_B ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Myomorpha ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Muroidea ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Muroidea_A ANCESTRAL SPECIES 12 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000160505 #9 ENSGT01000000214622.a.a.a ENSGT00950000182834.A.a.b.c #8 ENSGT00940000153634.b ENSGT00950000182834.B ##8 ENSGT00570000079239 ENSGT00390000013448.a.a.j.b ENSGT00390000013448.a.a.j.a ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.z #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.y #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Murinae ANCESTRAL SPECIES 6 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.a.yb ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000167442 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 Mus ANCESTRAL SPECIES 2 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.a.yb ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000167442 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.a.yb ##35 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870.d ENSGT00940000167442 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000156895 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870.d ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 Mouse MODERN SPECIES 2 Foxj1 (ENSMUSG00000034227) Exoc7 (ENSMUSG00000020792) Galr2 (ENSMUSG00000020793) Srp68 (ENSMUSG00000020780) Evpl (ENSMUSG00000034282) Cdk3 (ENSMUSG00000092300) Ten1 (ENSMUSG00000020778) Acox1 (ENSMUSG00000020777) Fbf1 (ENSMUSG00000020776) Mrpl38 (ENSMUSG00000020775) Trim65 (ENSMUSG00000054517) Trim47 (ENSMUSG00000020773) Wbp2 (ENSMUSG00000034341) Unc13d (ENSMUSG00000057948) Unk (ENSMUSG00000020770) H3f3b (ENSMUSG00000016559) #22 Galk1 (ENSMUSG00000020766) Itgb4 (ENSMUSG00000020758) Sap30bp (ENSMUSG00000020755) Smim6 (ENSMUSG00000075420) Smim5 (ENSMUSG00000048442) Recql5 (ENSMUSG00000020752) Myo15b (ENSMUSG00000034427) Llgl2 (ENSMUSG00000020782) Tsen54 (ENSMUSG00000020781) Caskin2 (ENSMUSG00000034471) Tmem94 (ENSMUSG00000020747) Grb2 (ENSMUSG00000059923) Slc25a19 (ENSMUSG00000020744) Mif4gd (ENSMUSG00000020743) Mrps7 (ENSMUSG00000046756) Mus_C ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 786 ENSMSIG00000002992 #22 Steppe mouse MODERN SPECIES 3135 Foxj1 (ENSMSIG00000026989) Exoc7 (ENSMSIG00000027010) Galr2 (ENSMSIG00000027109) Srp68 (ENSMSIG00000027117) Evpl (ENSMSIG00000027167) Cdk3 (ENSMSIG00000027206) ENSMSIG00000027222 Acox1 (ENSMSIG00000027230) Fbf1 (ENSMSIG00000027269) Mrpl38 (ENSMSIG00000027300) Trim65 (ENSMSIG00000027313) Trim47 (ENSMSIG00000027335) ENSMSIG00000027353 Unc13d (ENSMSIG00000027383) Unk (ENSMSIG00000027523) ENSMSIG00000027556 #22 Galk1 (ENSMSIG00000027567) Itgb4 (ENSMSIG00000027588) Sap30bp (ENSMSIG00000028005) Recql5 (ENSMSIG00000028015) Smim6 (ENSMSIG00000028032) Smim5 (ENSMSIG00000028034) Myo15b (ENSMSIG00000028039) Llgl2 (ENSMSIG00000028102) Tsen54 (ENSMSIG00000028141) Caskin2 (ENSMSIG00000028161) Tmem94 (ENSMSIG00000028168) ENSMSIG00000028209 Grb2 (ENSMSIG00000028212) Slc25a19 (ENSMSIG00000028240) Mif4gd (ENSMSIG00000028258) Steppe mouse MODERN SPECIES 3378 Cep70 (ENSMSIG00000014801) Esyt3 (ENSMSIG00000014739) Mras (ENSMSIG00000014726) Nme9 (ENSMSIG00000014688) Armc8 (ENSMSIG00000014484) Dbr1 (ENSMSIG00000014459) ENSMSIG00000014449 A4gnt (ENSMSIG00000014441) Dzip1l (ENSMSIG00000014303) Cldn18 (ENSMSIG00000014263) Sox14 (ENSMSIG00000014246) Il20rb (ENSMSIG00000014194) Nck1 (ENSMSIG00000014165) ENSMSIG00000014151 Stag1 (ENSMSIG00000013975) ENSMSIG00000013943 #22 Pccb (ENSMSIG00000013876) Msl2 (ENSMSIG00000013825) Ppp2r3a (ENSMSIG00000013723) ENSMSIG00000013691 ENSMSIG00000013676 Ephb1 (ENSMSIG00000013528) Ky (ENSMSIG00000013470) Cep63 (ENSMSIG00000013321) Anapc13 (ENSMSIG00000013301) Amotl2 (ENSMSIG00000013215) ENSMSIG00000013199 ENSMSIG00000013136 Slco2a1 (ENSMSIG00000013080) Rab6b (ENSMSIG00000013061) Srprb (ENSMSIG00000013033) Cricetidae ANCESTRAL SPECIES 13 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000160505 #9 ENSGT01000000214622.a.a.a ENSGT00950000182834.A.a.b.c #8 ENSGT00940000153634.b ENSGT00950000182834.B ##8 ENSGT00570000079239 ENSGT00390000013448.a.a.j.b ENSGT00390000013448.a.a.j.a ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.z #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.y #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Cricetinae ANCESTRAL SPECIES 4 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000160505 #9 ENSGT01000000214622.a.a.a ENSGT00950000182834.A.a.b.c #8 ENSGT00940000153634.b ENSGT00950000182834.B ##8 ENSGT00570000079239 ENSGT00390000013448.a.a.j.b ENSGT00390000013448.a.a.j.a ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.z #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.y #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 697 Srp9 (ENSMAUG00000017552) #15 Enah (ENSMAUG00000017836) #13 Lbr (ENSMAUG00000012993) #11 ENSMAUG00000014176 #9 Ccdc121rt1 (ENSMAUG00000010926) Cnih3 (ENSMAUG00000012379) #8 Wdr26 (ENSMAUG00000014280) Cnih4 (ENSMAUG00000012691) ##8 Nvl (ENSMAUG00000015157) ENSMAUG00000003804 ENSMAUG00000007599 Lefty1 (ENSMAUG00000009066) #20 Pycr2 (ENSMAUG00000017705) #19 Lefty2 (ENSMAUG00000018742) #20 Sde2 (ENSMAUG00000019326) #21 ENSMAUG00000019811 #22 Acbd3 (ENSMAUG00000008514) #23 Mixl1 (ENSMAUG00000000244) #24 Lin9 (ENSMAUG00000000458) #25 Parp1 (ENSMAUG00000008306) #26 Stum (ENSMAUG00000010054) #27 Itpkb (ENSMAUG00000013424) #28 Psen2 (ENSMAUG00000014629) #29 Coq8a (ENSMAUG00000016955) #30 Cdc42bpa (ENSMAUG00000010864) #31 ENSMAUG00000018123 Ahctf1 (ENSMAUG00000007505) #32 Kif28 (ENSMAUG00000011576) #33 Sccpdh (ENSMAUG00000014050) #34 Cnst (ENSMAUG00000014643) Tfb2m (ENSMAUG00000015170) #36 Golden Hamster MODERN SPECIES 637 Foxj1 (ENSMAUG00000009773) Exoc7 (ENSMAUG00000012327) Galr2 (ENSMAUG00000006970) Srp68 (ENSMAUG00000016401) Evpl (ENSMAUG00000009352) Cdk3 (ENSMAUG00000014303) Ten1 (ENSMAUG00000010159) Acox1 (ENSMAUG00000015640) Fbf1 (ENSMAUG00000017497) Mrpl38 (ENSMAUG00000008267) Trim65 (ENSMAUG00000020340) Trim47 (ENSMAUG00000017693) Wbp2 (ENSMAUG00000020790) ENSMAUG00000009510 Unk (ENSMAUG00000011025) H3f3b (ENSMAUG00000014699) #22 Galk1 (ENSMAUG00000015380) Itgb4 (ENSMAUG00000017795) Sap30bp (ENSMAUG00000021680) Recql5 (ENSMAUG00000017594) Smim6 (ENSMAUG00000012003) ENSMAUG00000017715 ENSMAUG00000014909 Llgl2 (ENSMAUG00000015309) Tsen54 (ENSMAUG00000016838) ENSMAUG00000015366 Tmem94 (ENSMAUG00000018154) Grb2 (ENSMAUG00000016953) ENSMAUG00000018531 Mif4gd (ENSMAUG00000021885) Mrps7 (ENSMAUG00000015115) Cricetidae_B ANCESTRAL SPECIES 8 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000160505 #9 ENSGT01000000214622.a.a.a ENSGT00950000182834.A.a.b.c #8 ENSGT00940000153634.b ENSGT00950000182834.B ##8 ENSGT00570000079239 ENSGT00390000013448.a.a.j.b ENSGT00390000013448.a.a.j.a ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056.z #20 ENSGT00950000183044.a.a.a.c #19 ENSGT00390000010056.y #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00940000156766 #37 Prairie vole MODERN SPECIES 14 ENSMOCG00000004862 Enah (ENSMOCG00000016095) #13 ENSMOCG00000009557 ENSMOCG00000011930 #9 Cnih3 (ENSMOCG00000011071) #8 Wdr26 (ENSMOCG00000018920) Cnih4 (ENSMOCG00000014531) ##8 Nvl (ENSMOCG00000017466) 9130409I23Rik (ENSMOCG00000021672) ENSMOCG00000002922 #16 Tmem63a (ENSMOCG00000010850) #17 Lefty1 (ENSMOCG00000013803) #20 Pycr2 (ENSMOCG00000000522) #19 Lefty2 (ENSMOCG00000020511) #20 Sde2 (ENSMOCG00000003863) #21 ENSMOCG00000017501 #22 Acbd3 (ENSMOCG00000021409) #23 Mixl1 (ENSMOCG00000022650) #24 Lin9 (ENSMOCG00000021496) #25 Parp1 (ENSMOCG00000014315) #26 Stum (ENSMOCG00000020677) #27 Itpkb (ENSMOCG00000002630) #28 Psen2 (ENSMOCG00000021854) #29 Coq8a (ENSMOCG00000022622) #30 Cdc42bpa (ENSMOCG00000019771) #31 Ahctf1 (ENSMOCG00000004774) #32 Kif28 (ENSMOCG00000022053) #33 Sccpdh (ENSMOCG00000017380) #34 Cnst (ENSMOCG00000006613) Tfb2m (ENSMOCG00000016864) #36 Smyd3 (ENSMOCG00000019317) #37 Northern American deer mouse MODERN SPECIES 12 Alg10b (ENSPEMG00000025886) Cpne8 (ENSPEMG00000021609) Kif21a (ENSPEMG00000023536) Abcd2 (ENSPEMG00000023925) CN725425 (ENSPEMG00000023448) Slc2a13 (ENSPEMG00000000329) Lrrk2 (ENSPEMG00000008690) Cntn1 (ENSPEMG00000001410) ENSPEMG00000030528 Pdzrn4 (ENSPEMG00000005226) Gxylt1 (ENSPEMG00000025095) Yaf2 (ENSPEMG00000000787) Zcrb1 (ENSPEMG00000005293) ENSPEMG00000030409 Prickle1 (ENSPEMG00000013383) ENSPEMG00000025295 #22 Adamts20 (ENSPEMG00000017664) Pus7l (ENSPEMG00000016583) Irak4 (ENSPEMG00000018737) Twf1 (ENSPEMG00000000838) Tmem117 (ENSPEMG00000006395) ENSPEMG00000024666 Nell2 (ENSPEMG00000021060) Dbx2 (ENSPEMG00000021509) Ano6 (ENSPEMG00000022036) ENSPEMG00000030605 Arid2 (ENSPEMG00000014806) ENSPEMG00000030307 ENSPEMG00000027302 Slc38a2 (ENSPEMG00000016717) Slc38a4 (ENSPEMG00000012063) Atlantogenata ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Xenarthra ANCESTRAL SPECIES 4 ENSGT00940000161294 ENSGT00390000008825.b.b ENSGT00390000009925.b ENSGT00940000156895 ENSGT00390000003595 ENSGT00920000149199 ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00900000141125 ENSGT00940000161851 ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800.h ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 Armadillo MODERN SPECIES 792 ENSDNOG00000038549 MRPL38 (ENSDNOG00000013796) ENSDNOG00000039907 UNC13D (ENSDNOG00000041427) UNK (ENSDNOG00000038145) ENSDNOG00000041897 #22 GALK1 (ENSDNOG00000025875) ITGB4 (ENSDNOG00000037024) SAP30BP (ENSDNOG00000032103) ENSDNOG00000012832 Marsupialia ANCESTRAL SPECIES 3 ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B.i ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00950000183044.a.a.a.c.a #19 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000018900 #32 ENSGT00940000163104 #33 ENSGT00390000004799 #34 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b #36 ENSGT00910000148060 Opossum MODERN SPECIES 1 WDR26 (ENSMODG00000005227) ENSMODG00000040191 CNIH3 (ENSMODG00000038171) #8 ENSMODG00000005248 ENSMODG00000005822 ENSMODG00000043253 ENSMODG00000005848 #11 ENAH (ENSMODG00000005856) #13 SRP9 (ENSMODG00000038570) #15 EPHX1 (ENSMODG00000005882) #16 TMEM63A (ENSMODG00000005934) #17 ENSMODG00000005956 #19 ENSMODG00000005964 #20 ENSMODG00000050067 SDE2 (ENSMODG00000005979) #21 H3F3B (ENSMODG00000045947) #22 ACBD3 (ENSMODG00000005990) #23 MIXL1 (ENSMODG00000005994) #24 LIN9 (ENSMODG00000006033) #25 PARP1 (ENSMODG00000006076) #26 STUM (ENSMODG00000027423) #27 ITPKB (ENSMODG00000006095) #28 PSEN2 (ENSMODG00000006114) #29 COQ8A (ENSMODG00000006151) #30 CDC42BPA (ENSMODG00000006246) #31 AHCTF1 (ENSMODG00000006310) #32 ENSMODG00000024676 #33 SCCPDH (ENSMODG00000006356) #34 CNST (ENSMODG00000006372) ENSMODG00000043627 ENSMODG00000038289 #36 Marsupialia_b ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Diprotodontia ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Common wonbat MODERN SPECIES 1037 EXOC7 (ENSVURG00010010977) ZACN (ENSVURG00010011100) GALR2 (ENSVURG00010011113) SRP68 (ENSVURG00010011137) ENSVURG00010011174 CDK3 (ENSVURG00010011190) TEN1 (ENSVURG00010011211) ACOX1 (ENSVURG00010011218) FBF1 (ENSVURG00010011240) MRPL38 (ENSVURG00010011255) TRIM65 (ENSVURG00010011264) TRIM47 (ENSVURG00010011279) ENSVURG00010011299 UNC13D (ENSVURG00010011337) UNK (ENSVURG00010011426) ENSVURG00010011438 #22 GALK1 (ENSVURG00010011448) ITGB4 (ENSVURG00010011475) ENSVURG00010011557 RECQL5 (ENSVURG00010011571) SMIM5 (ENSVURG00010011608) ENSVURG00010011618 LLGL2 (ENSVURG00010011636) TSEN54 (ENSVURG00010011686) ENSVURG00010011710 TMEM94 (ENSVURG00010011727) GRB2 (ENSVURG00010011830) SLC25A19 (ENSVURG00010011865) MIF4GD (ENSVURG00010011874) MRPS7 (ENSVURG00010011908) GGA3 (ENSVURG00010011921) Wallaby MODERN SPECIES 3806 UNK (ENSMEUG00000004094) ENSMEUG00000004090 #22 Sauria ANCESTRAL SPECIES 34 ENSGT00940000161445 ENSGT00940000170834 ENSGT00390000014682 ENSGT00390000014139 ENSGT00940000161057 ENSGT00940000158344.b ENSGT00390000002548 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000161901 ENSGT00940000159256 ENSGT00390000017267 ENSGT01090000260005.a.b.a.b.b ENSGT01100000263504.a.b.a.a #22 ENSGT00940000171204 ENSGT01100000263504.a.b.a.b.a.b ##35 ENSGT00940000161634 ENSGT00940000160281 ENSGT00940000160500 ENSGT00940000161895 ENSGT00530000063174.b ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000161428 ENSGT00940000160457 ENSGT00390000015495 ENSGT00940000157823 ENSGT00940000178461 ENSGT00940000160232 Archelosauria ANCESTRAL SPECIES 33 ENSGT00940000161445 ENSGT00940000170834 ENSGT00390000014682 ENSGT00390000014139 ENSGT00940000161057 ENSGT00940000158344.b ENSGT00390000002548 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000161901 ENSGT00940000159256 ENSGT00390000017267 ENSGT01090000260005.a.b.a.b.b ENSGT01100000263504.a.b.a.a #22 ENSGT00940000171204 ENSGT01100000263504.a.b.a.b.a.b ##35 ENSGT00940000161634 ENSGT00940000160281 ENSGT00940000160500 ENSGT00940000161895 ENSGT00530000063174.b ENSGT00940000153348.C ENSGT00940000161428 ENSGT00940000160457 ENSGT00390000015495 ENSGT00940000157823 ENSGT00940000178461 ENSGT00940000160232 ENSGT00940000157162 Cryptodira ANCESTRAL SPECIES 1 ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921 ENSGT00950000182836.a Chinese turtle MODERN SPECIES 686 ENSPSIG00000011407 LBR (ENSPSIG00000013788) #11 ENAH (ENSPSIG00000014372) #13 SRP9 (ENSPSIG00000014842) #15 EPHX1 (ENSPSIG00000015003) #16 TMEM63A (ENSPSIG00000015072) #17 ENSPSIG00000016169 #20 SDE2 (ENSPSIG00000016286) #21 ENSPSIG00000016288 ENSPSIG00000016297 #22 ACBD3 (ENSPSIG00000016300) #23 ENSPSIG00000016352 LIN9 (ENSPSIG00000016362) #25 PARP1 (ENSPSIG00000016374) #26 STUM (ENSPSIG00000017291) #27 ITPKB (ENSPSIG00000017341) #28 PSEN2 (ENSPSIG00000017347) #29 COQ8A (ENSPSIG00000017351) #30 CDC42BPA (ENSPSIG00000017372) #31 XDH (ENSPSIG00000007446) EHD3 (ENSPSIG00000017757) CAPN14 (ENSPSIG00000017963) GALNT14 (ENSPSIG00000005019) ENSPSIG00000000884 CAPN13 (ENSPSIG00000005500) Testudinoidea ANCESTRAL SPECIES ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00940000171204 ENSGT01100000263504.a.b.b.a.b ##35 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00950000186173 ENSGT00940000158182 Emydidae ANCESTRAL SPECIES 17 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851.a ENSGT00940000165001.a.b ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00940000171204 ENSGT01100000263504.a.b.a.b.a.a ##35 ENSGT00940000167259 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 Three-toed box turtle MODERN SPECIES 90 FOXJ1 (ENSTMTG00000018047) EXOC7 (ENSTMTG00000017962) GALR2 (ENSTMTG00000017944) SRP68 (ENSTMTG00000017913) ENSTMTG00000017741 CDK3 (ENSTMTG00000017667) TEN1 (ENSTMTG00000017650) ACOX1 (ENSTMTG00000017609) FBF1 (ENSTMTG00000016544) MRPL38 (ENSTMTG00000016458) ENSTMTG00000016447 ENSTMTG00000016430 WBP2 (ENSTMTG00000016413) UNC13D (ENSTMTG00000016065) UNK (ENSTMTG00000015936) ENSTMTG00000015912 #22 ENSTMTG00000015895 GALK1 (ENSTMTG00000015883) ITGB4 (ENSTMTG00000015826) SAP30BP (ENSTMTG00000015791) SMIM5 (ENSTMTG00000015772) RECQL5 (ENSTMTG00000015741) ENSTMTG00000015710 ENSTMTG00000015653 LLGL2 (ENSTMTG00000015592) TSEN54 (ENSTMTG00000015553) ENSTMTG00000015541 ENSTMTG00000015533 TMEM94 (ENSTMTG00000015482) GRB2 (ENSTMTG00000015461) SLC25A19 (ENSTMTG00000015450) Testudinidae ANCESTRAL SPECIES 6 ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00950000183107.a.b.a ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00950000186173 ENSGT00940000158182 ENSGT00940000160921 Abingdon island giant tortoise MODERN SPECIES 1080 ENSCABG00000010712 #22 ENSCABG00000010742 ENSCABG00000011536 Goode s thornscrub tortoise MODERN SPECIES 17 NVL (ENSGEVG00005015719) CNIH4 (ENSGEVG00005015701) ##8 WDR26 (ENSGEVG00005015598) CNIH3 (ENSGEVG00005015546) #8 ENSGEVG00005015495 ENSGEVG00005015462 ENSGEVG00005015408 ENSGEVG00005015386 LBR (ENSGEVG00005015360) #11 ENAH (ENSGEVG00005015322) #13 SRP9 (ENSGEVG00005015297) #15 EPHX1 (ENSGEVG00005015263) #16 TMEM63A (ENSGEVG00005015156) #17 ENSGEVG00005015097 #20 SDE2 (ENSGEVG00005015082) #21 ENSGEVG00005015026 #22 ACBD3 (ENSGEVG00005015002) #23 MIXL1 (ENSGEVG00005014953) #24 LIN9 (ENSGEVG00005014867) #25 PARP1 (ENSGEVG00005014820) #26 STUM (ENSGEVG00005014790) #27 ENSGEVG00005014678 ITPKB (ENSGEVG00005014643) #28 PSEN2 (ENSGEVG00005014558) #29 COQ8A (ENSGEVG00005014517) #30 CDC42BPA (ENSGEVG00005014464) #31 ENSGEVG00005014287 #31 XDH (ENSGEVG00005014160) EHD3 (ENSGEVG00005014115) ENSGEVG00005014063 GALNT14 (ENSGEVG00005013754) Archosauria ANCESTRAL SPECIES 12 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00940000165001.a.b ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.b.a.b ##35 ENSGT00940000167259 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Australian saltwater crocodile MODERN SPECIES 47 RNF157 (ENSCPRG00005006773) EXOC7 (ENSCPRG00005006716) GALR2 (ENSCPRG00005006703) SRP68 (ENSCPRG00005006694) ENSCPRG00005006674 CDK3 (ENSCPRG00005006668) TEN1 (ENSCPRG00005006664) ACOX1 (ENSCPRG00005006650) FBF1 (ENSCPRG00005006629) MRPL38 (ENSCPRG00005006619) TRIM65 (ENSCPRG00005006618) ENSCPRG00005006609 WBP2 (ENSCPRG00005006603) UNC13D (ENSCPRG00005006519) UNK (ENSCPRG00005006464) ENSCPRG00005006428 #22 GALK1 (ENSCPRG00005006406) ITGB4 (ENSCPRG00005004809) SAP30BP (ENSCPRG00005004640) SMIM5 (ENSCPRG00005004637) RECQL5 (ENSCPRG00005004620) ENSCPRG00005004608 ENSCPRG00005004593 LLGL2 (ENSCPRG00005004571) TSEN54 (ENSCPRG00005004562) ENSCPRG00005004559 ENSCPRG00005004552 TMEM94 (ENSCPRG00005004119) GRB2 (ENSCPRG00005004058) SLC25A19 (ENSCPRG00005004003) MIF4GD (ENSCPRG00005003995) Aves ANCESTRAL SPECIES 17 ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00940000165001.a.b ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.a ##35 ENSGT01100000263504.b ##35 ENSGT00940000171204 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Neognathae ANCESTRAL SPECIES 17 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Neognathae_b ANCESTRAL SPECIES 19 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00940000165001.a.b ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Passeriformes ANCESTRAL SPECIES 17 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT01030000235299.a.a.b ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00940000165001.a.b ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870.g.a ENSGT00520000062027 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158025.b ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 Great tit MODERN SPECIES 8 FOXJ1 (ENSPMJG00000008250) EXOC7 (ENSPMJG00000008234) GALR2 (ENSPMJG00000008232) SRP68 (ENSPMJG00000008231) ENSPMJG00000007825 ENSPMJG00000007823 CDK3 (ENSPMJG00000007702) TEN1 (ENSPMJG00000007701) ACOX1 (ENSPMJG00000007700) MRPL38 (ENSPMJG00000007699) ENSPMJG00000007698 ENSPMJG00000007697 WBP2 (ENSPMJG00000007690) UNC13D (ENSPMJG00000007670) UNK (ENSPMJG00000007542) ENSPMJG00000007537 #22 GALK1 (ENSPMJG00000007512) ITGB4 (ENSPMJG00000001319) ENSPMJG00000001253 SMIM5 (ENSPMJG00000001247) RECQL5 (ENSPMJG00000001223) ENSPMJG00000001212 ENSPMJG00000000845 LLGL2 (ENSPMJG00000000795) TSEN54 (ENSPMJG00000000766) MCHR1 (ENSPMJG00000000758) ENSPMJG00000000725 TMEM94 (ENSPMJG00000000598) GRB2 (ENSPMJG00000000573) SLC25A19 (ENSPMJG00000000566) MIF4GD (ENSPMJG00000000560) Passeriformes_d ANCESTRAL SPECIES 17 ENSGT00940000156895 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT01030000235299.a.a.b ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870.h ENSGT00520000062027 ENSGT00390000007870.g.a ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 Flycatcher MODERN SPECIES 8 FOXJ1 (ENSFALG00000000971) EXOC7 (ENSFALG00000000975) GALR2 (ENSFALG00000000980) SRP68 (ENSFALG00000000982) ENSFALG00000000987 ENSFALG00000025835 CDK3 (ENSFALG00000000992) ENSFALG00000024866 MRPL38 (ENSFALG00000001005) TRIM65 (ENSFALG00000028723) ENSFALG00000001020 WBP2 (ENSFALG00000026954) ENSFALG00000024919 UNC13D (ENSFALG00000001027) UNK (ENSFALG00000001035) ENSFALG00000001052 #22 GALK1 (ENSFALG00000001061) ITGB4 (ENSFALG00000001064) SAP30BP (ENSFALG00000027577) RECQL5 (ENSFALG00000001087) ENSFALG00000001093 ENSFALG00000024516 LLGL2 (ENSFALG00000001115) TSEN54 (ENSFALG00000001119) ENSFALG00000015106 CASKIN2 (ENSFALG00000001125) TMEM94 (ENSFALG00000001137) GRB2 (ENSFALG00000023197) SLC25A19 (ENSFALG00000023937) MIF4GD (ENSFALG00000025719) MRPS7 (ENSFALG00000001162) Passeriformes_g ANCESTRAL SPECIES 58 ENSGT00940000156765 ENSGT00940000160599 ENSGT00940000160358 ENSGT01030000234613.b.b ENSGT00940000159555 ENSGT00940000159610 ENSGT01030000234642.a.b.b.d.b.d ENSGT00390000014682 ENSGT00940000158344.b ENSGT00390000002548 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256 ENSGT00390000017267 ENSGT01090000260005.a.b.a.b.b ENSGT01100000263504.a.b.a.a #22 ENSGT00390000009409 ENSGT00940000159343 ENSGT00940000160378 Passeroidea ANCESTRAL SPECIES 19 ENSGT00940000156895 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT01030000235299.a.a.b ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000154334.l ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870.h ENSGT00520000062027 ENSGT00390000007870.g.a ENSGT00940000157800 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 90 ENSTGUG00000022886 ENSTGUG00000022867 ENSTGUG00000026946 ENSTGUG00000028622 ENSTGUG00000028656 ENSTGUG00000026943 ENSTGUG00000029586 ENSTGUG00000023185 ENSTGUG00000026521 ENSTGUG00000028463 ENSTGUG00000025277 ENSTGUG00000026509 EHD2 (ENSTGUG00000024660) NOP53 (ENSTGUG00000018833) ENSTGUG00000029304 ENSTGUG00000026183 #22 ENSTGUG00000023522 ENSTGUG00000022039 ENSTGUG00000029363 ENSTGUG00000024158 EIF3K (ENSTGUG00000021289) ENSTGUG00000029474 ENSTGUG00000026538 ENSTGUG00000020906 ENSTGUG00000021795 ##35 ENSTGUG00000027973 ENSTGUG00000021988 ENSTGUG00000021829 ENSTGUG00000019027 ENSTGUG00000022424 ENSTGUG00000019023 Zebra finch MODERN SPECIES 9 RNF157 (ENSTGUG00000007998) FOXJ1 (ENSTGUG00000025833) EXOC7 (ENSTGUG00000008021) GALR2 (ENSTGUG00000022268) SRP68 (ENSTGUG00000008083) ENSTGUG00000008114 ENSTGUG00000022535 CDK3 (ENSTGUG00000008139) ACOX1 (ENSTGUG00000008167) MRPL38 (ENSTGUG00000008223) ENSTGUG00000020525 ENSTGUG00000008241 WBP2 (ENSTGUG00000008249) UNC13D (ENSTGUG00000008268) UNK (ENSTGUG00000008279) H3F3B (ENSTGUG00000008312) #22 GALK1 (ENSTGUG00000008321) ITGB4 (ENSTGUG00000008343) ENSTGUG00000008426 RECQL5 (ENSTGUG00000008444) ENSTGUG00000008485 ENSTGUG00000008499 LLGL2 (ENSTGUG00000008523) TSEN54 (ENSTGUG00000008548) MCHR1 (ENSTGUG00000026892) CASKIN2 (ENSTGUG00000026779) TMEM94 (ENSTGUG00000008583) GRB2 (ENSTGUG00000008612) SLC25A19 (ENSTGUG00000018437) GGA3 (ENSTGUG00000008660) MRPS7 (ENSTGUG00000008655) Neognathae_c ANCESTRAL SPECIES 23 ENSGT00940000156895 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 Golden eagle DUPLICATION Golden eagle MODERN SPECIES 4 CAPN2 (ENSACCG00020013713) TP53BP2 (ENSACCG00020013658) FBXO28 (ENSACCG00020013552) DEGS1 (ENSACCG00020013532) NVL (ENSACCG00020013513) CNIH4 (ENSACCG00020013489) ##8 WDR26 (ENSACCG00020013450) CNIH3 (ENSACCG00020013406) #8 LBR (ENSACCG00020013359) #11 ENAH (ENSACCG00020013315) #13 SRP9 (ENSACCG00020013255) #15 EPHX1 (ENSACCG00020013246) #16 TMEM63A (ENSACCG00020013208) #17 ENSACCG00020013138 #20 SDE2 (ENSACCG00020013122) #21 ENSACCG00020013104 #22 ACBD3 (ENSACCG00020013090) #23 ENSACCG00020013075 LIN9 (ENSACCG00020013062) #25 PARP1 (ENSACCG00020013013) #26 STUM (ENSACCG00020012947) #27 ITPKB (ENSACCG00020012928) #28 ENSACCG00020012909 PSEN2 (ENSACCG00020012879) #29 COQ8A (ENSACCG00020012847) #30 CDC42BPA (ENSACCG00020012470) #31 XDH (ENSACCG00020012219) ENSACCG00020012159 EHD3 (ENSACCG00020012137) GALNT14 (ENSACCG00020012100) ENSACCG00020012005 Golden eagle MODERN SPECIES 21 FOXJ1 (ENSACCG00020008912) EXOC7 (ENSACCG00020009061) GALR2 (ENSACCG00020009130) SRP68 (ENSACCG00020009145) ENSACCG00020000360 CDK3 (ENSACCG00020000403) TEN1 (ENSACCG00020000425) ACOX1 (ENSACCG00020000467) FBF1 (ENSACCG00020000538) MRPL38 (ENSACCG00020000593) TRIM65 (ENSACCG00020000648) ENSACCG00020000681 WBP2 (ENSACCG00020000707) UNC13D (ENSACCG00020000926) UNK (ENSACCG00020001070) ENSACCG00020001146 #22 ENSACCG00020001162 GALK1 (ENSACCG00020001171) ITGB4 (ENSACCG00020001247) SAP30BP (ENSACCG00020001354) RECQL5 (ENSACCG00020001399) ENSACCG00020001444 ENSACCG00020001485 LLGL2 (ENSACCG00020001535) TSEN54 (ENSACCG00020001570) ENSACCG00020001593 CASKIN2 (ENSACCG00020001614) TMEM94 (ENSACCG00020001672) GRB2 (ENSACCG00020001714) SLC25A19 (ENSACCG00020001738) MIF4GD (ENSACCG00020001751) Galloanserae ANCESTRAL SPECIES 2 ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00940000162190 #24 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921 ENSGT00950000182836.a Phasianidae ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Phasianidae_b ANCESTRAL SPECIES ENSGT01100000263504.a.b.a.a #22 Chicken MODERN SPECIES 31 ECH1 (ENSGALG00010009232) ACTN4 (ENSGALG00010009277) MAP4K1 (ENSGALG00010009299) EIF3K (ENSGALG00010009330) RYR1 (ENSGALG00010009379) ENSGALG00010010765 SLC8A2 (ENSGALG00010010770) KPTN (ENSGALG00010010774) NAPA (ENSGALG00010010781) ENSGALG00010010789 BICRA (ENSGALG00010010800) EHD2 (ENSGALG00010010813) NOP53 (ENSGALG00010008186) ENSGALG00010008205 SELENOW (ENSGALG00010008215) H3-IX (ENSGALG00010008224) #22 OTX5 (ENSGALG00010008261) BCKDHA (ENSGALG00010008284) DMAC2 (ENSGALG00010008295) EXOSC5 (ENSGALG00010008310) TGFB1 (ENSGALG00010008327) CCDC97 (ENSGALG00010008331) HNRNPUL1 (ENSGALG00010008335) PLD3 (ENSGALG00010008342) ENSGALG00010008352 AKT2 (ENSGALG00010008377) PSMD8 (ENSGALG00010008401) ENSGALG00010010892 SMARCA4 (ENSGALG00010008408) ENSGALG00010008419 ENSGALG00010008428 Anatidae ANCESTRAL SPECIES 18 ENSGT00940000156895 ENSGT00390000003595 ENSGT01090000260051.a ENSGT00390000011856 ENSGT00940000153578.A ENSGT00940000153335.a.a ENSGT00390000017589 ENSGT00940000157287 ENSGT00720000108861 ENSGT00900000141125 ENSGT00940000161851 ENSGT00940000162951.b ENSGT00530000063718.a.a ENSGT00730000110939.b ENSGT00940000159360 ENSGT01100000263504.a.b.a.a #22 ENSGT00950000183187.B ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B.k.b ENSGT00930000151032.B.l ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00960000189697 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a Duck DUPLICATION Duck MODERN SPECIES 21 CENPF (ENSAPLG00000009924) PTPN14 (ENSAPLG00000010016) SMYD2 (ENSAPLG00000010622) PROX1 (ENSAPLG00000028813) RPS6KC1 (ENSAPLG00000011098) ANGEL2 (ENSAPLG00000011269) VASH2 (ENSAPLG00000011439) FLVCR1 (ENSAPLG00000011448) TATDN3 (ENSAPLG00000011801) NSL1 (ENSAPLG00000024285) BATF3 (ENSAPLG00000025402) ATF3 (ENSAPLG00000012304) ENSAPLG00000012312 #17 ENSAPLG00000013195 #20 SDE2 (ENSAPLG00000013231) #21 ENSAPLG00000024151 #22 ACBD3 (ENSAPLG00000013267) #23 MIXL1 (ENSAPLG00000025166) #24 LIN9 (ENSAPLG00000013627) #25 PARP1 (ENSAPLG00000014039) #26 STUM (ENSAPLG00000017920) #27 ITPKB (ENSAPLG00000014056) #28 PSEN2 (ENSAPLG00000014082) #29 COQ8A (ENSAPLG00000014501) #30 CDC42BPA (ENSAPLG00000012422) #31 XDH (ENSAPLG00000010946) EHD3 (ENSAPLG00000010467) GALNT14 (ENSAPLG00000009654) CAPN13 (ENSAPLG00000009169) LCLAT1 (ENSAPLG00000009124) LBH (ENSAPLG00000009024) Duck MODERN SPECIES 9 RNF157 (ENSAPLG00000004013) FOXJ1 (ENSAPLG00000003960) EXOC7 (ENSAPLG00000003256) GALR2 (ENSAPLG00000003239) SRP68 (ENSAPLG00000002532) ENSAPLG00000001088 CDK3 (ENSAPLG00000000888) TEN1 (ENSAPLG00000023536) ACOX1 (ENSAPLG00000016081) FBF1 (ENSAPLG00000015809) MRPL38 (ENSAPLG00000015690) ENSAPLG00000018146 WBP2 (ENSAPLG00000015622) UNC13D (ENSAPLG00000015199) UNK (ENSAPLG00000014891) ENSAPLG00000003917 #22 GALK1 (ENSAPLG00000013366) ITGB4 (ENSAPLG00000011722) SAP30BP (ENSAPLG00000011643) SMIM5 (ENSAPLG00000020078) RECQL5 (ENSAPLG00000011106) ENSAPLG00000010900 LLGL2 (ENSAPLG00000009521) TSEN54 (ENSAPLG00000009419) ENSAPLG00000001391 ENSAPLG00000028233 TMEM94 (ENSAPLG00000008675) ENSAPLG00000030191 GRB2 (ENSAPLG00000008555) SLC25A19 (ENSAPLG00000024769) MIF4GD (ENSAPLG00000025678) Lepidosauria ANCESTRAL SPECIES ENSGT00570000079239 ENSGT00940000170165 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000162640 ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921 ENSGT00950000182836.a Episquamata ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000162640 ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921 ENSGT00950000182836.a Toxicofera ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00940000162640 ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00960000189514 ENSGT00940000160921 Elapidae ANCESTRAL SPECIES ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00960000189414 ENSGT00940000160421 ENSGT00940000158182 ENSGT00960000189514 ENSGT00950000182836.a ENSGT00390000009189 Indian cobra MODERN SPECIES 1 FOXJ1 (ENSNNAG00000019121) EXOC7 (ENSNNAG00000019124) ENSNNAG00000019127 SRP68 (ENSNNAG00000019130) ENSNNAG00000019133 CDK3 (ENSNNAG00000019134) TEN1 (ENSNNAG00000019136) ACOX1 (ENSNNAG00000019143) FBF1 (ENSNNAG00000019149) MRPL38 (ENSNNAG00000019153) ENSNNAG00000019155 ENSNNAG00000019157 WBP2 (ENSNNAG00000019158) UNC13D (ENSNNAG00000019159) UNK (ENSNNAG00000019162) ENSNNAG00000019163 #22 ENSNNAG00000019164 ENSNNAG00000019166 ENSNNAG00000019167 ENSNNAG00000019168 ENSNNAG00000019169 SAP30BP (ENSNNAG00000019172) RECQL5 (ENSNNAG00000019174) ENSNNAG00000019175 ENSNNAG00000019176 LLGL2 (ENSNNAG00000019178) TSEN54 (ENSNNAG00000019179) ENSNNAG00000019180 ENSNNAG00000019181 TMEM94 (ENSNNAG00000019184) GRB2 (ENSNNAG00000019185) Elapidae_a ANCESTRAL SPECIES 2 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00960000189414 ENSGT00940000158182 ENSGT00960000189514 ENSGT00950000182836.a ENSGT00390000009189 ENSGT00940000154800 Blue-lipped sea krait MODERN SPECIES 10335 ENSLLTG00000011558 #22 Acanthophiinae ANCESTRAL SPECIES 3 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00390000000412 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000165801 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000157923 #29 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00950000183114.a.a ENSGT00960000189414 ENSGT00940000158182 ENSGT00960000189514 ENSGT00950000182836.a ENSGT00390000009189 ENSGT00940000154800 Mainland tiger snake MODERN SPECIES 3 DEGS1 (ENSNSUG00000009943) NVL (ENSNSUG00000009942) CNIH4 (ENSNSUG00000009941) ##8 WDR26 (ENSNSUG00000009940) CNIH3 (ENSNSUG00000009939) #8 ENSNSUG00000009938 ENSNSUG00000009937 LBR (ENSNSUG00000009936) #11 ENSNSUG00000009935 ENAH (ENSNSUG00000009934) #13 SRP9 (ENSNSUG00000009933) #15 EPHX1 (ENSNSUG00000009932) #16 TMEM63A (ENSNSUG00000009855) #17 ENSNSUG00000009854 #20 SDE2 (ENSNSUG00000009853) #21 ENSNSUG00000009852 #22 ACBD3 (ENSNSUG00000009851) #23 LIN9 (ENSNSUG00000009850) #25 PARP1 (ENSNSUG00000009467) #26 STUM (ENSNSUG00000009466) #27 ITPKB (ENSNSUG00000009465) #28 PSEN2 (ENSNSUG00000009464) #29 COQ8A (ENSNSUG00000009463) #30 ENSNSUG00000009462 CDC42BPA (ENSNSUG00000009460) #31 XDH (ENSNSUG00000009459) ENSNSUG00000009458 GALNT14 (ENSNSUG00000009455) ENSNSUG00000009454 LCLAT1 (ENSNSUG00000009452) LBH (ENSNSUG00000009450) Eastern brown snake MODERN SPECIES 5 FBXO28 (ENSPTXG00000012824) DEGS1 (ENSPTXG00000012823) NVL (ENSPTXG00000012820) CNIH4 (ENSPTXG00000012819) ##8 WDR26 (ENSPTXG00000012818) CNIH3 (ENSPTXG00000012817) #8 ENSPTXG00000012816 ENSPTXG00000012815 LBR (ENSPTXG00000012814) #11 ENAH (ENSPTXG00000012813) #13 SRP9 (ENSPTXG00000012812) #15 EPHX1 (ENSPTXG00000012811) #16 TMEM63A (ENSPTXG00000012810) #17 ENSPTXG00000012809 #20 SDE2 (ENSPTXG00000012808) #21 ENSPTXG00000012807 #22 ACBD3 (ENSPTXG00000012806) #23 LIN9 (ENSPTXG00000012798) #25 PARP1 (ENSPTXG00000012779) #26 STUM (ENSPTXG00000012777) #27 ITPKB (ENSPTXG00000012775) #28 PSEN2 (ENSPTXG00000012773) #29 COQ8A (ENSPTXG00000012772) #30 CDC42BPA (ENSPTXG00000012771) #31 XDH (ENSPTXG00000012770) ENSPTXG00000012769 GALNT14 (ENSPTXG00000012766) ENSPTXG00000012763 LCLAT1 (ENSPTXG00000012762) LBH (ENSPTXG00000012759) YPEL5 (ENSPTXG00000012758) Anura ANCESTRAL SPECIES 21 ENSGT00940000153463.b ENSGT00390000002970 ENSGT00390000013448.a.a ENSGT00570000079239 ENSGT00950000182834.B ##8 ENSGT00940000153634.b ENSGT00950000182834.A.a.b.c #8 ENSGT00940000165101 ENSGT00390000000417.a.a.b.a.b #11 ENSGT00940000157376 #13 ENSGT00390000018505 #15 ENSGT00390000002210.d #16 ENSGT00940000159576 #17 ENSGT00390000010056 #20 ENSGT00530000063402.b #21 ENSGT01100000263504.a.b.a.a #22 ENSGT00390000007539.c ENSGT00530000063651.a #23 ENSGT00390000003188 #25 ENSGT01030000234555.a.b ENSGT00940000156058 #26 ENSGT00390000008003 #27 ENSGT00940000156764.a #28 ENSGT00940000156810 #30 ENSGT01030000234517.H.b #31 ENSGT00390000017697.b ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921.h Frog MODERN SPECIES 5 degs1 (ENSXETG00000018586) nvl (ENSXETG00000018569) cnih4 (ENSXETG00000037711) ##8 wdr26 (ENSXETG00000018563) cnih3 (ENSXETG00000045361) #8 dnah14 (ENSXETG00000018553) lbr (ENSXETG00000018551) #11 enah (ENSXETG00000018550) #13 srp9 (ENSXETG00000040743) #15 ENSXETG00000041953 ephx1 (ENSXETG00000022654) #16 ENSXETG00000044567 tmem63a (ENSXETG00000022650) #17 lefty (ENSXETG00000043657) #20 sde2 (ENSXETG00000022643) #21 h3-3a (ENSXETG00000022641) #22 ENSXETG00000022637 acbd3 (ENSXETG00000022634) #23 bix1.1 (ENSXETG00000022633) bix1.2 (ENSXETG00000042078) mix1 (ENSXETG00000025923) ENSXETG00000048528 lin9 (ENSXETG00000022620) #25 ENSXETG00000036773 parp1 (ENSXETG00000022610) #26 stum (ENSXETG00000045792) #27 itpkb (ENSXETG00000022603) #28 coq8a (ENSXETG00000022587) #30 cdc42bpa (ENSXETG00000022112) #31 ENSXETG00000043363 ciao2b (ENSXETG00000040114)