Mus	ANCESTRAL SPECIES	5	ENSGT00940000160744 #10	ENSGT00950000183030.m.a.a.a.b ##11	ENSGT00940000158977 #12	ENSGT00390000006356 #13	ENSGT00940000161020 #14	ENSGT00390000005914.b	ENSGT01050000244879.b.a.a	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a ##22	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596
Shrew mouse	MODERN SPECIES	18	Chst10 (MGP_PahariEiJ_G0027312) #7	Nms (MGP_PahariEiJ_G0027313) #8	Pdcl3 (MGP_PahariEiJ_G0027314) #9	Npas2 (MGP_PahariEiJ_G0027315) #10	MGP_PahariEiJ_G0027316 #11	Tbc1d8 (MGP_PahariEiJ_G0027317) #12	Cnot11 (MGP_PahariEiJ_G0027318) #13	Rnf149 (MGP_PahariEiJ_G0027319) #14	MGP_PahariEiJ_G0027320 #15	Map4k4 (MGP_PahariEiJ_G0027321) #16	Il1r2 (MGP_PahariEiJ_G0027322) #17	Il1r1 (MGP_PahariEiJ_G0027323) #18	MGP_PahariEiJ_G0027324 #19	Il1rl1 (MGP_PahariEiJ_G0027325) #20	Il18r1 (MGP_PahariEiJ_G0027326) #21	Il18rap (MGP_PahariEiJ_G0027327) #22	Slc9a4 (MGP_PahariEiJ_G0027328) #23	Slc9a2 (MGP_PahariEiJ_G0027329) #24	Mfsd9 (MGP_PahariEiJ_G0027330) #25	Tmem182 (MGP_PahariEiJ_G0027331) #26	Pou3f3 (MGP_PahariEiJ_G0027332) #27	Mrps9 (MGP_PahariEiJ_G0027333) #28	Gpr45 (MGP_PahariEiJ_G0027334) #29	Tgfbrap1 (MGP_PahariEiJ_G0027335) #30	AI597479 (MGP_PahariEiJ_G0027336) #31	Fhl2 (MGP_PahariEiJ_G0027337) #32	Nck2 (MGP_PahariEiJ_G0027338) #33	Ecrg4 (MGP_PahariEiJ_G0027339) #34	Uxs1 (MGP_PahariEiJ_G0027340) #35	Tpp2 (MGP_PahariEiJ_G0027341) #36	Poglut2 (MGP_PahariEiJ_G0027343) #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160744 #10	ENSGT00950000183030.m.a.a.a.b ##11	ENSGT00940000158977 #12	ENSGT00390000006356 #13	ENSGT00940000161020 #14	ENSGT00390000005914.b	ENSGT01050000244879.b.a.a	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a ##22	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596
Mus_B	ANCESTRAL SPECIES	21	ENSGT00940000160744 #10	ENSGT00950000183030.m.a.a.a.b ##11	ENSGT00940000158977 #12	ENSGT00390000006356 #13	ENSGT00940000161020 #14	ENSGT00390000005914.b	ENSGT01050000244879.b.a.a	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a ##22	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160744 #10	ENSGT00950000183030.m.a.a.a.b ##11	ENSGT00940000158977 #12	ENSGT00390000006356 #13	ENSGT00940000161020 #14	ENSGT00390000005914.b	ENSGT01050000244879.b.a.a	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a ##22	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596
Steppe mouse	MODERN SPECIES	3348	Npas2 (ENSMSIG00000022192) #10	Rpl31 (ENSMSIG00000022245) ##11	Tbc1d8 (ENSMSIG00000022280) #12	Cnot11 (ENSMSIG00000022348) #13	Rnf149 (ENSMSIG00000022375) #14	Creg2 (ENSMSIG00000022406)	Rfx8 (ENSMSIG00000022417)	ENSMSIG00000022440 #15	Map4k4 (ENSMSIG00000022455) #16	Il1r2 (ENSMSIG00000025031) #17	Il1r1 (ENSMSIG00000025043) #18	Il1rl2 (ENSMSIG00000025067) ##22	ENSMSIG00000025093	Il1rl1 (ENSMSIG00000025096) #20	Il18r1 (ENSMSIG00000025150) #21	Il18rap (ENSMSIG00000025343) #22	Slc9a4 (ENSMSIG00000025357) #23	Slc9a2 (ENSMSIG00000025415) #24	Mfsd9 (ENSMSIG00000025439) #25	Tmem182 (ENSMSIG00000025450) #26	ENSMSIG00000025470	ENSMSIG00000025480	Mrps9 (ENSMSIG00000025504) #28	Gpr45 (ENSMSIG00000025534) #29	Tgfbrap1 (ENSMSIG00000025547) #30	ENSMSIG00000025607 #31	Fhl2 (ENSMSIG00000025611) #32
spretus	MODERN SPECIES		Pdcl3 (MGP_SPRETEiJ_G0014871) #9	Npas2 (MGP_SPRETEiJ_G0014872) #10	Rpl31 (MGP_SPRETEiJ_G0014873) ##11	Tbc1d8 (MGP_SPRETEiJ_G0014874) #12	Cnot11 (MGP_SPRETEiJ_G0014875) #13	Rnf149 (MGP_SPRETEiJ_G0014876) #14	Creg2 (MGP_SPRETEiJ_G0014877)	Rfx8 (MGP_SPRETEiJ_G0014878)	MGP_SPRETEiJ_G0014879 #15	Map4k4 (MGP_SPRETEiJ_G0014880) #16	MGP_SPRETEiJ_G0014881 #17	Il1r1 (MGP_SPRETEiJ_G0014882) #18	Il1rl2 (MGP_SPRETEiJ_G0014883) ##22	Il1rl1 (MGP_SPRETEiJ_G0014884) #20	Il18r1 (MGP_SPRETEiJ_G0014885) #21	Il18rap (MGP_SPRETEiJ_G0014886) #22	Slc9a4 (MGP_SPRETEiJ_G0014887) #23	Slc9a2 (MGP_SPRETEiJ_G0014888) #24	Mfsd9 (MGP_SPRETEiJ_G0014889) #25	Tmem182 (MGP_SPRETEiJ_G0014890) #26	Pou3f3 (MGP_SPRETEiJ_G0014891) #27	Mrps9 (MGP_SPRETEiJ_G0014892) #28	Gpr45 (MGP_SPRETEiJ_G0014893) #29	Tgfbrap1 (MGP_SPRETEiJ_G0014894) #30	AI597479 (MGP_SPRETEiJ_G0014895) #31	Fhl2 (MGP_SPRETEiJ_G0014896) #32	MGP_SPRETEiJ_G0014897 #33	Ecrg4 (MGP_SPRETEiJ_G0014898) #34	Uxs1 (MGP_SPRETEiJ_G0014899) #35	Tpp2 (MGP_SPRETEiJ_G0014900) #36	Mettl21c (MGP_SPRETEiJ_G0014901)
Mouse	MODERN SPECIES		Nms (ENSMUSG00000067604) #8	Pdcl3 (ENSMUSG00000026078) #9	Npas2 (ENSMUSG00000026077) #10	Rpl31 (ENSMUSG00000073702) ##11	Tbc1d8 (ENSMUSG00000003134) #12	Cnot11 (ENSMUSG00000003135) #13	Rnf149 (ENSMUSG00000048234) #14	Creg2 (ENSMUSG00000050967)	Rfx8 (ENSMUSG00000057173)	Map4k4 (ENSMUSG00000026074) #16	Il1r2 (ENSMUSG00000026073) #17	Il1r1 (ENSMUSG00000026072) #18	Il1rl2 (ENSMUSG00000070942) ##22	Il1rl1 (ENSMUSG00000026069) #20	Il18r1 (ENSMUSG00000026070) #21	Il18rap (ENSMUSG00000026068) #22	Slc9a4 (ENSMUSG00000026065) #23	Slc9a2 (ENSMUSG00000026062) #24	Mfsd9 (ENSMUSG00000041945) #25	Tmem182 (ENSMUSG00000079588) #26	Pou3f3 (ENSMUSG00000045515) #27	Mrps9 (ENSMUSG00000060679) #28	Gpr45 (ENSMUSG00000041907) #29	Tgfbrap1 (ENSMUSG00000070939) #30	AI597479 (ENSMUSG00000010290) #31	Fhl2 (ENSMUSG00000008136) #32	Nck2 (ENSMUSG00000066877) #33	Ecrg4 (ENSMUSG00000026051) #34	Uxs1 (ENSMUSG00000057363) #35	Tpp2 (ENSMUSG00000041763) #36	Mettl21c (ENSMUSG00000047343)
Ryukyu mouse	MODERN SPECIES		Pdcl3 (MGP_CAROLIEiJ_G0014067) #9	Npas2 (MGP_CAROLIEiJ_G0014068) #10	Rpl31 (MGP_CAROLIEiJ_G0014069) ##11	Tbc1d8 (MGP_CAROLIEiJ_G0014070) #12	Cnot11 (MGP_CAROLIEiJ_G0014071) #13	Rnf149 (MGP_CAROLIEiJ_G0014072) #14	Creg2 (MGP_CAROLIEiJ_G0014073)	Rfx8 (MGP_CAROLIEiJ_G0014074)	MGP_CAROLIEiJ_G0014075 #15	Map4k4 (MGP_CAROLIEiJ_G0014076) #16	Il1r2 (MGP_CAROLIEiJ_G0014077) #17	Il1r1 (MGP_CAROLIEiJ_G0014078) #18	Il1rl2 (MGP_CAROLIEiJ_G0014079) ##22	Il1rl1 (MGP_CAROLIEiJ_G0014080) #20	Il18r1 (MGP_CAROLIEiJ_G0014081) #21	Il18rap (MGP_CAROLIEiJ_G0014082) #22	Slc9a4 (MGP_CAROLIEiJ_G0014083) #23	Slc9a2 (MGP_CAROLIEiJ_G0014084) #24	Mfsd9 (MGP_CAROLIEiJ_G0014085) #25	Tmem182 (MGP_CAROLIEiJ_G0014086) #26	Pou3f3 (MGP_CAROLIEiJ_G0014087) #27	Mrps9 (MGP_CAROLIEiJ_G0014088) #28	Gpr45 (MGP_CAROLIEiJ_G0014089) #29	Tgfbrap1 (MGP_CAROLIEiJ_G0014090) #30	AI597479 (MGP_CAROLIEiJ_G0014091) #31	Fhl2 (MGP_CAROLIEiJ_G0014092) #32	Nck2 (MGP_CAROLIEiJ_G0014093) #33	Ecrg4 (MGP_CAROLIEiJ_G0014094) #34	Uxs1 (MGP_CAROLIEiJ_G0014095) #35	Tpp2 (MGP_CAROLIEiJ_G0014096) #36	Mettl21c (MGP_CAROLIEiJ_G0014097)