Glires	ANCESTRAL SPECIES	13	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Rodentia_B	ANCESTRAL SPECIES	36	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Myomorpha	ANCESTRAL SPECIES	40	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Muroidea	ANCESTRAL SPECIES	45	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596 #37
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596 #37
Ryukyu mouse	MODERN SPECIES		Pdcl3 (MGP_CAROLIEiJ_G0014067) #7	Npas2 (MGP_CAROLIEiJ_G0014068) #8	Rpl31 (MGP_CAROLIEiJ_G0014069) #9	Tbc1d8 (MGP_CAROLIEiJ_G0014070) #10	Cnot11 (MGP_CAROLIEiJ_G0014071) #11	Rnf149 (MGP_CAROLIEiJ_G0014072) #12	Creg2 (MGP_CAROLIEiJ_G0014073) #13	Rfx8 (MGP_CAROLIEiJ_G0014074) #14	MGP_CAROLIEiJ_G0014075 #15	Map4k4 (MGP_CAROLIEiJ_G0014076) #16	Il1r2 (MGP_CAROLIEiJ_G0014077) #17	Il1r1 (MGP_CAROLIEiJ_G0014078) #18	Il1rl2 (MGP_CAROLIEiJ_G0014079) #19	Il1rl1 (MGP_CAROLIEiJ_G0014080) #20	Il18r1 (MGP_CAROLIEiJ_G0014081) #21	Il18rap (MGP_CAROLIEiJ_G0014082) #22	Slc9a4 (MGP_CAROLIEiJ_G0014083) #23	Slc9a2 (MGP_CAROLIEiJ_G0014084) #24	Mfsd9 (MGP_CAROLIEiJ_G0014085) #25	Tmem182 (MGP_CAROLIEiJ_G0014086) #26	Pou3f3 (MGP_CAROLIEiJ_G0014087) #27	Mrps9 (MGP_CAROLIEiJ_G0014088) #28	Gpr45 (MGP_CAROLIEiJ_G0014089) #29	Tgfbrap1 (MGP_CAROLIEiJ_G0014090) #30	AI597479 (MGP_CAROLIEiJ_G0014091) #31	Fhl2 (MGP_CAROLIEiJ_G0014092) #32	Nck2 (MGP_CAROLIEiJ_G0014093) #33	Ecrg4 (MGP_CAROLIEiJ_G0014094) #34	Uxs1 (MGP_CAROLIEiJ_G0014095) #35	Tpp2 (MGP_CAROLIEiJ_G0014096) #36	Mettl21c (MGP_CAROLIEiJ_G0014097) #37
Mus_B	ANCESTRAL SPECIES	21	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596 #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00860000135990 #15	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00390000014623 #36	ENSGT00940000156596 #37
Steppe mouse	MODERN SPECIES	3348	Npas2 (ENSMSIG00000022192) #8	Rpl31 (ENSMSIG00000022245) #9	Tbc1d8 (ENSMSIG00000022280) #10	Cnot11 (ENSMSIG00000022348) #11	Rnf149 (ENSMSIG00000022375) #12	Creg2 (ENSMSIG00000022406) #13	Rfx8 (ENSMSIG00000022417) #14	ENSMSIG00000022440 #15	Map4k4 (ENSMSIG00000022455) #16	Il1r2 (ENSMSIG00000025031) #17	Il1r1 (ENSMSIG00000025043) #18	Il1rl2 (ENSMSIG00000025067) #19	ENSMSIG00000025093	Il1rl1 (ENSMSIG00000025096) #20	Il18r1 (ENSMSIG00000025150) #21	Il18rap (ENSMSIG00000025343) #22	Slc9a4 (ENSMSIG00000025357) #23	Slc9a2 (ENSMSIG00000025415) #24	Mfsd9 (ENSMSIG00000025439) #25	Tmem182 (ENSMSIG00000025450) #26	ENSMSIG00000025470	ENSMSIG00000025480	Mrps9 (ENSMSIG00000025504) #28	Gpr45 (ENSMSIG00000025534) #29	Tgfbrap1 (ENSMSIG00000025547) #30	ENSMSIG00000025607 #31	Fhl2 (ENSMSIG00000025611) #32
spretus	MODERN SPECIES		Pdcl3 (MGP_SPRETEiJ_G0014871) #7	Npas2 (MGP_SPRETEiJ_G0014872) #8	Rpl31 (MGP_SPRETEiJ_G0014873) #9	Tbc1d8 (MGP_SPRETEiJ_G0014874) #10	Cnot11 (MGP_SPRETEiJ_G0014875) #11	Rnf149 (MGP_SPRETEiJ_G0014876) #12	Creg2 (MGP_SPRETEiJ_G0014877) #13	Rfx8 (MGP_SPRETEiJ_G0014878) #14	MGP_SPRETEiJ_G0014879 #15	Map4k4 (MGP_SPRETEiJ_G0014880) #16	MGP_SPRETEiJ_G0014881 #17	Il1r1 (MGP_SPRETEiJ_G0014882) #18	Il1rl2 (MGP_SPRETEiJ_G0014883) #19	Il1rl1 (MGP_SPRETEiJ_G0014884) #20	Il18r1 (MGP_SPRETEiJ_G0014885) #21	Il18rap (MGP_SPRETEiJ_G0014886) #22	Slc9a4 (MGP_SPRETEiJ_G0014887) #23	Slc9a2 (MGP_SPRETEiJ_G0014888) #24	Mfsd9 (MGP_SPRETEiJ_G0014889) #25	Tmem182 (MGP_SPRETEiJ_G0014890) #26	Pou3f3 (MGP_SPRETEiJ_G0014891) #27	Mrps9 (MGP_SPRETEiJ_G0014892) #28	Gpr45 (MGP_SPRETEiJ_G0014893) #29	Tgfbrap1 (MGP_SPRETEiJ_G0014894) #30	AI597479 (MGP_SPRETEiJ_G0014895) #31	Fhl2 (MGP_SPRETEiJ_G0014896) #32	MGP_SPRETEiJ_G0014897 #33	Ecrg4 (MGP_SPRETEiJ_G0014898) #34	Uxs1 (MGP_SPRETEiJ_G0014899) #35	Tpp2 (MGP_SPRETEiJ_G0014900) #36	Mettl21c (MGP_SPRETEiJ_G0014901) #37
Mouse	MODERN SPECIES		Nms (ENSMUSG00000067604)	Pdcl3 (ENSMUSG00000026078) #7	Npas2 (ENSMUSG00000026077) #8	Rpl31 (ENSMUSG00000073702) #9	Tbc1d8 (ENSMUSG00000003134) #10	Cnot11 (ENSMUSG00000003135) #11	Rnf149 (ENSMUSG00000048234) #12	Creg2 (ENSMUSG00000050967) #13	Rfx8 (ENSMUSG00000057173) #14	Map4k4 (ENSMUSG00000026074) #16	Il1r2 (ENSMUSG00000026073) #17	Il1r1 (ENSMUSG00000026072) #18	Il1rl2 (ENSMUSG00000070942) #19	Il1rl1 (ENSMUSG00000026069) #20	Il18r1 (ENSMUSG00000026070) #21	Il18rap (ENSMUSG00000026068) #22	Slc9a4 (ENSMUSG00000026065) #23	Slc9a2 (ENSMUSG00000026062) #24	Mfsd9 (ENSMUSG00000041945) #25	Tmem182 (ENSMUSG00000079588) #26	Pou3f3 (ENSMUSG00000045515) #27	Mrps9 (ENSMUSG00000060679) #28	Gpr45 (ENSMUSG00000041907) #29	Tgfbrap1 (ENSMUSG00000070939) #30	AI597479 (ENSMUSG00000010290) #31	Fhl2 (ENSMUSG00000008136) #32	Nck2 (ENSMUSG00000066877) #33	Ecrg4 (ENSMUSG00000026051) #34	Uxs1 (ENSMUSG00000057363) #35	Tpp2 (ENSMUSG00000041763) #36	Mettl21c (ENSMUSG00000047343) #37
Shrew mouse	MODERN SPECIES	18	Chst10 (MGP_PahariEiJ_G0027312)	Nms (MGP_PahariEiJ_G0027313)	Pdcl3 (MGP_PahariEiJ_G0027314) #7	Npas2 (MGP_PahariEiJ_G0027315) #8	MGP_PahariEiJ_G0027316 ##9	Tbc1d8 (MGP_PahariEiJ_G0027317) #10	Cnot11 (MGP_PahariEiJ_G0027318) #11	Rnf149 (MGP_PahariEiJ_G0027319) #12	MGP_PahariEiJ_G0027320 #15	Map4k4 (MGP_PahariEiJ_G0027321) #16	Il1r2 (MGP_PahariEiJ_G0027322) #17	Il1r1 (MGP_PahariEiJ_G0027323) #18	MGP_PahariEiJ_G0027324 ##22	Il1rl1 (MGP_PahariEiJ_G0027325) #20	Il18r1 (MGP_PahariEiJ_G0027326) #21	Il18rap (MGP_PahariEiJ_G0027327) #22	Slc9a4 (MGP_PahariEiJ_G0027328) #23	Slc9a2 (MGP_PahariEiJ_G0027329) #24	Mfsd9 (MGP_PahariEiJ_G0027330) #25	Tmem182 (MGP_PahariEiJ_G0027331) #26	Pou3f3 (MGP_PahariEiJ_G0027332) #27	Mrps9 (MGP_PahariEiJ_G0027333) #28	Gpr45 (MGP_PahariEiJ_G0027334) #29	Tgfbrap1 (MGP_PahariEiJ_G0027335) #30	AI597479 (MGP_PahariEiJ_G0027336) #31	Fhl2 (MGP_PahariEiJ_G0027337) #32	Nck2 (MGP_PahariEiJ_G0027338) #33	Ecrg4 (MGP_PahariEiJ_G0027339) #34	Uxs1 (MGP_PahariEiJ_G0027340) #35	Tpp2 (MGP_PahariEiJ_G0027341) #36	Poglut2 (MGP_PahariEiJ_G0027343)
Rat	MODERN SPECIES	19	Rpl31 (ENSRNOG00000013508) #9	Tbc1d8 (ENSRNOG00000013583) #10	Cnot11 (ENSRNOG00000023220) #11	Rnf149 (ENSRNOG00000013946) #12	Creg2 (ENSRNOG00000013991) #13	Rfx8 (ENSRNOG00000058243) #14	ENSRNOG00000068018 #15	Map4k4 (ENSRNOG00000014013) #16	Il1r2 (ENSRNOG00000014378) #17	RGD1564447 (ENSRNOG00000032108)	Il1r1 (ENSRNOG00000014504) #18	Il1rl2 (ENSRNOG00000014683) #19	AABR07067459.1 (ENSRNOG00000061227)	Il1rl1 (ENSRNOG00000014835) #20	Il18r1 (ENSRNOG00000015027) #21	Il18rap (ENSRNOG00000054218) #22	Slc9a4 (ENSRNOG00000015306) #23	Slc9a2 (ENSRNOG00000015567) #24	Mfsd9 (ENSRNOG00000023129) #25	Tmem182 (ENSRNOG00000028945) #26	Pou3f3 (ENSRNOG00000038909) #27	Mrps9 (ENSRNOG00000016201) #28	Arpc5l-ps1 (ENSRNOG00000067388)	Gpr45 (ENSRNOG00000016446) #29	Tgfbrap1 (ENSRNOG00000024562) #30	RGD1310553 (ENSRNOG00000016447) #31	Fhl2 (ENSRNOG00000016866) #32	Hsp90ab1-ps13 (ENSRNOG00000067665)	Nck2 (ENSRNOG00000017155) #33	Ecrg4 (ENSRNOG00000023576) #34	Tpp2 (ENSRNOG00000011194) #36
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00510000049213	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Golden Hamster	MODERN SPECIES	671	ENSMAUG00000004398	ENSMAUG00000012235	Chst10 (ENSMAUG00000000525)	ENSMAUG00000002348	ENSMAUG00000014729 #7	ENSMAUG00000012976 #8	Tbc1d8 (ENSMAUG00000012769) #10	Cnot11 (ENSMAUG00000008251) #11	Rnf149 (ENSMAUG00000022122) #12	Rfx8 (ENSMAUG00000022016) #14	Map4k4 (ENSMAUG00000009759) #16	Il1r2 (ENSMAUG00000019130) #17	Il1rl2 (ENSMAUG00000015098) #19	Il1rl1 (ENSMAUG00000013794) #20	Il18r1 (ENSMAUG00000018302) #21	Il18rap (ENSMAUG00000015985) #22	Slc9a4 (ENSMAUG00000011978) #23	Slc9a2 (ENSMAUG00000012644) #24	Mfsd9 (ENSMAUG00000019056) #25	Tmem182 (ENSMAUG00000008293) #26	Pou3f3 (ENSMAUG00000006830) #27	Mrps9 (ENSMAUG00000014517) #28	Gpr45 (ENSMAUG00000020154) #29	Tgfbrap1 (ENSMAUG00000010940) #30	AI597479 (ENSMAUG00000009584) #31	Fhl2 (ENSMAUG00000007307) #32	Nck2 (ENSMAUG00000018229) #33	ENSMAUG00000014028	Ecrg4 (ENSMAUG00000000332) #34	Uxs1 (ENSMAUG00000000545) #35	St6gal2 (ENSMAUG00000019734)
Chinese hamster chok1gshd	MODERN SPECIES	165	Nms (ENSCGRG00001019460)	Pdcl3 (ENSCGRG00001016908) #7	Npas2 (ENSCGRG00001008921) #8	ENSCGRG00001018894 ##9	Tbc1d8 (ENSCGRG00001020779) #10	Cnot11 (ENSCGRG00001018815) #11	Rnf149 (ENSCGRG00001009277) #12	Creg2 (ENSCGRG00001008591) #13	Rfx8 (ENSCGRG00001019751) #14	Map4k4 (ENSCGRG00001014594) #16	Il1r2 (ENSCGRG00001012348) #17	Il1r1 (ENSCGRG00001008398) #18	Il1rl2 (ENSCGRG00001015507) #19	Il1rl1 (ENSCGRG00001000922) #20	Il18r1 (ENSCGRG00001003731) #21	Il18rap (ENSCGRG00001020521) #22	Slc9a4 (ENSCGRG00001013202) #23	Slc9a2 (ENSCGRG00001020868) #24	Mfsd9 (ENSCGRG00001020127) #25	Tmem182 (ENSCGRG00001013568) #26	Pou3f3 (ENSCGRG00001001262) #27	Mrps9 (ENSCGRG00001012228) #28	Gpr45 (ENSCGRG00001001563) #29	Tgfbrap1 (ENSCGRG00001001074) #30	AI597479 (ENSCGRG00001000237) #31	Fhl2 (ENSCGRG00001019694) #32	Nck2 (ENSCGRG00001010470) #33	Ecrg4 (ENSCGRG00001008420) #34	Uxs1 (ENSCGRG00001022493) #35	St6gal2 (ENSCGRG00001015136)	ENSCGRG00001023065
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00960000186941	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915	ENSGT00940000160996
Northern American deer mouse	MODERN SPECIES	13	Nms (ENSPEMG00000019828)	Pdcl3 (ENSPEMG00000013451) #7	Npas2 (ENSPEMG00000027016) #8	Rpl31 (ENSPEMG00000011336) #9	ENSPEMG00000027601	Tbc1d8 (ENSPEMG00000009663) #10	Rnf149 (ENSPEMG00000012870) #12	Creg2 (ENSPEMG00000004685) #13	Rfx8 (ENSPEMG00000000748) #14	Map4k4 (ENSPEMG00000011266) #16	Il1r2 (ENSPEMG00000005448) #17	Il1r1 (ENSPEMG00000015111) #18	Il1rl2 (ENSPEMG00000010586) #19	Il1rl1 (ENSPEMG00000000517) #20	Il18r1 (ENSPEMG00000020042) #21	Il18rap (ENSPEMG00000000406) #22	Slc9a4 (ENSPEMG00000017892) #23	Slc9a2 (ENSPEMG00000019513) #24	Mfsd9 (ENSPEMG00000016627) #25	Tmem182 (ENSPEMG00000027682) #26	ENSPEMG00000025331	ENSPEMG00000019460	Mrps9 (ENSPEMG00000020068) #28	ENSPEMG00000030538	Gpr45 (ENSPEMG00000012991) #29	Tgfbrap1 (ENSPEMG00000019325) #30	AI597479 (ENSPEMG00000019378) #31	Fhl2 (ENSPEMG00000019477) #32	Nck2 (ENSPEMG00000021323) #33	Ecrg4 (ENSPEMG00000027255) #34	Uxs1 (ENSPEMG00000010077) #35
Prairie vole	MODERN SPECIES	352	ENSMOCG00000015837	ENSMOCG00000003508 #8	Rpl31 (ENSMOCG00000012618) #9	Tbc1d8 (ENSMOCG00000020892) #10	Cnot11 (ENSMOCG00000020059) #11	ENSMOCG00000022614 #12	ENSMOCG00000004327	Creg2 (ENSMOCG00000005255) #13	Rfx8 (ENSMOCG00000020079) #14	Map4k4 (ENSMOCG00000003196) #16	Il1r2 (ENSMOCG00000014917) #17	Il1r1 (ENSMOCG00000012872) #18	Il1rl2 (ENSMOCG00000021017) #19	Il1rl1 (ENSMOCG00000013141) #20	Il18r1 (ENSMOCG00000018379) #21	Il18rap (ENSMOCG00000000247) #22	Slc9a4 (ENSMOCG00000019168) #23	Slc9a2 (ENSMOCG00000001948) #24	Mfsd9 (ENSMOCG00000018562) #25	Tmem182 (ENSMOCG00000013151) #26	Mrps9 (ENSMOCG00000008753) #28	Gpr45 (ENSMOCG00000006013) #29	Tgfbrap1 (ENSMOCG00000017029) #30	AI597479 (ENSMOCG00000011309) #31	Fhl2 (ENSMOCG00000008372) #32	Nck2 (ENSMOCG00000016084) #33	Ecrg4 (ENSMOCG00000016888) #34	ENSMOCG00000007915 #35	St6gal2 (ENSMOCG00000021974)	Slc5a7 (ENSMOCG00000019715)	Agfg1 (ENSMOCG00000019646)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1097															ENSNGAG00000011483	Il18rap (ENSNGAG00000011205) #22	Slc9a4 (ENSNGAG00000003462) #23	Slc9a2 (ENSNGAG00000021603) #24	Mfsd9 (ENSNGAG00000021609) #25	Tmem182 (ENSNGAG00000010921) #26	Mrps9 (ENSNGAG00000020814) #28	Gpr45 (ENSNGAG00000015630) #29	ENSNGAG00000021723 #30	AI597479 (ENSNGAG00000021260) #31	Fhl2 (ENSNGAG00000022251) #32
Kangaroo rat	MODERN SPECIES	366	Pdcl3 (ENSDORG00000012397) #7	ENSDORG00000027399 #8	ENSDORG00000029805	ENSDORG00000015728 ##9	Tbc1d8 (ENSDORG00000015729) #10	Cnot11 (ENSDORG00000004481) #11	Rnf149 (ENSDORG00000007032) #12	Creg2 (ENSDORG00000026419) #13	Rfx8 (ENSDORG00000027680) #14	Map4k4 (ENSDORG00000011322) #16	Il1r2 (ENSDORG00000001386) #17	Il1r1 (ENSDORG00000008123) #18	Il1rl2 (ENSDORG00000008125) #19	Il1rl1 (ENSDORG00000000310) #20	Il18r1 (ENSDORG00000009793) #21	Il18rap (ENSDORG00000009798) #22	Slc9a4 (ENSDORG00000009801) #23	Slc9a2 (ENSDORG00000007378) #24	Mfsd9 (ENSDORG00000007380) #25	Tmem182 (ENSDORG00000001502) #26	Agtr2 (ENSDORG00000029423)	Slc6a14 (ENSDORG00000026053)	Klhl13 (ENSDORG00000008906)	Wdr44 (ENSDORG00000006076)	Dock11 (ENSDORG00000012146)	Il13ra1 (ENSDORG00000012156)	Lonrf3 (ENSDORG00000007891)	Pgrmc1 (ENSDORG00000016710)	Akap17b (ENSDORG00000016711)	Slc25a43 (ENSDORG00000027768)	Slc25a5 (ENSDORG00000016192)
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Sciuridae	ANCESTRAL SPECIES	61						ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34
Marmotini	ANCESTRAL SPECIES	103						ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34
Alpin marmot	MODERN SPECIES	99						CNOT11 (ENSMMMG00000019519) #11	ENSMMMG00000019511 #12	CREG2 (ENSMMMG00000019502) #13	RFX8 (ENSMMMG00000019489) #14	MAP4K4 (ENSMMMG00000019140) #16	IL1R2 (ENSMMMG00000019123) #17	IL1R1 (ENSMMMG00000019096) #18	IL1RL2 (ENSMMMG00000019064) #19	IL1RL1 (ENSMMMG00000019023) #20	IL18R1 (ENSMMMG00000018982) #21	IL18RAP (ENSMMMG00000018945) #22	SLC9A4 (ENSMMMG00000018936) #23	SLC9A2 (ENSMMMG00000018920) #24	MFSD9 (ENSMMMG00000018912) #25	TMEM182 (ENSMMMG00000018908) #26	MRPS9 (ENSMMMG00000018867) #28	GPR45 (ENSMMMG00000018860) #29	TGFBRAP1 (ENSMMMG00000018810) #30	C2orf49 (ENSMMMG00000018804) #31	FHL2 (ENSMMMG00000018792) #32	NCK2 (ENSMMMG00000018747) #33	ECRG4 (ENSMMMG00000018736) #34	ENSMMMG00000018729	ENSMMMG00000018724	ENSMMMG00000018699
Marmotini_b	ANCESTRAL SPECIES	214						ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26
Arctic ground squirrel	MODERN SPECIES	389					CNOT11 (ENSUPAG00010008934) #11	RNF149 (ENSUPAG00010008945) #12	ENSUPAG00010008977	CREG2 (ENSUPAG00010008997) #13	RFX8 (ENSUPAG00010009009) #14	MAP4K4 (ENSUPAG00010009052) #16	IL1R2 (ENSUPAG00010010625) #17	IL1R1 (ENSUPAG00010010814) #18	IL1RL2 (ENSUPAG00010010855) #19	ENSUPAG00010010880 #20	IL18R1 (ENSUPAG00010010899) #21	IL18RAP (ENSUPAG00010010926) #22	SLC9A4 (ENSUPAG00010010967) #23	SLC9A2 (ENSUPAG00010010983) #24	MFSD9 (ENSUPAG00010011005) #25	TMEM182 (ENSUPAG00010011013) #26
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005017536	ENSSVLG00005017486	ENSSVLG00005017437	ENSSVLG00005017192	ENSSVLG00005017114	CNOT11 (ENSSVLG00005017020) #11	RNF149 (ENSSVLG00005016973) #12	CREG2 (ENSSVLG00005016917) #13	RFX8 (ENSSVLG00005016773) #14	MAP4K4 (ENSSVLG00005016510) #16	IL1R2 (ENSSVLG00005016305) #17	IL1R1 (ENSSVLG00005016023) #18	IL1RL2 (ENSSVLG00005015833) #19	ENSSVLG00005015618 #20	IL18R1 (ENSSVLG00005015483) #21	IL18RAP (ENSSVLG00005015196) #22	SLC9A4 (ENSSVLG00005015058) #23	SLC9A2 (ENSSVLG00005014903) #24	MFSD9 (ENSSVLG00005014829) #25	TMEM182 (ENSSVLG00005014677) #26	POU3F3 (ENSSVLG00005014648) #27	MRPS9 (ENSSVLG00005014535) #28	GPR45 (ENSSVLG00005014512) #29	TGFBRAP1 (ENSSVLG00005014478) #30	C2orf49 (ENSSVLG00005014398) #31	FHL2 (ENSSVLG00005014354) #32	NCK2 (ENSSVLG00005014324) #33	ENSSVLG00005014270	ECRG4 (ENSSVLG00005014209) #34	ENSSVLG00005014185	TBC1D8 (ENSSVLG00005014106) #10
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00510000049213	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Naked mole-rat female	MODERN SPECIES	23	RPL31 (ENSHGLG00000034864) ##9	TBC1D8 (ENSHGLG00000005052) #10	CNOT11 (ENSHGLG00000005196) #11	CREG2 (ENSHGLG00000045007) #13	RFX8 (ENSHGLG00000009282) #14	MAP4K4 (ENSHGLG00000010571) #16	ENSHGLG00000041789	IL1R2 (ENSHGLG00000014764) #17	ENSHGLG00000042381	ENSHGLG00000036054	ENSHGLG00000046327	IL1R1 (ENSHGLG00000035160) #18	IL1RL2 (ENSHGLG00000006830) #19	IL1RL1 (ENSHGLG00000009148) #20	IL18R1 (ENSHGLG00000014630) #21	IL18RAP (ENSHGLG00000040342) #22	SLC9A4 (ENSHGLG00000015136) #23	SLC9A2 (ENSHGLG00000016134) #24	ENSHGLG00000036196 #25	TMEM182 (ENSHGLG00000048689) #26	ENSHGLG00000004651	ENSHGLG00000047894	POU3F3 (ENSHGLG00000049835) #27	MRPS9 (ENSHGLG00000011532) #28	GPR45 (ENSHGLG00000011855) #29	TGFBRAP1 (ENSHGLG00000012207) #30	C2orf49 (ENSHGLG00000009244) #31	FHL2 (ENSHGLG00000049244) #32	ENSHGLG00000045802	ENSHGLG00000047742 ##33	ENSHGLG00000009295
Hystricomorpha_a	ANCESTRAL SPECIES	52	ENSGT00510000049213	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.a.b #9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Hystricomorpha_b	ANCESTRAL SPECIES	59	ENSGT00940000154295.o #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.b.b.a.a.b ##9	ENSGT00950000183030.m.a.a.b.b.a.b.b.b ##9	ENSGT00940000158977 #10	ENSGT00390000006356 #11	ENSGT00940000161020 #12	ENSGT00390000005914.b #13	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00950000183001.a.b.b #29	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915
Long-tailed chinchilla	MODERN SPECIES	177	CHST10 (ENSCLAG00000003206)	NMS (ENSCLAG00000004166)	ENSCLAG00000004610 #7	NPAS2 (ENSCLAG00000006228) #8	RPL31 (ENSCLAG00000006775) ##9	TBC1D8 (ENSCLAG00000013253) #10	ENSCLAG00000014249 #11	ENSCLAG00000008966 #12	RFX8 (ENSCLAG00000009461) #14	MAP4K4 (ENSCLAG00000008989) #16	IL1R2 (ENSCLAG00000003202) #17	ENSCLAG00000003425 #18	IL1RL2 (ENSCLAG00000003870) #19	ENSCLAG00000004065 #20	IL18R1 (ENSCLAG00000004416) #21	IL18RAP (ENSCLAG00000005267) #22	SLC9A4 (ENSCLAG00000005526) #23	SLC9A2 (ENSCLAG00000004660) #24	MFSD9 (ENSCLAG00000004767) #25	TMEM182 (ENSCLAG00000004968) #26	MRPS9 (ENSCLAG00000005209) #28	GPR45 (ENSCLAG00000017756) #29	TGFBRAP1 (ENSCLAG00000005507) #30	C2orf49 (ENSCLAG00000005595) #31	FHL2 (ENSCLAG00000008685) #32	NCK2 (ENSCLAG00000008756) #33	ECRG4 (ENSCLAG00000008845) #34	UXS1 (ENSCLAG00000008916) #35	ENSCLAG00000009281	SLC5A7 (ENSCLAG00000009368)	SULT1C2 (ENSCLAG00000009532)
Guinea pig	MODERN SPECIES	24	NMS (ENSCPOG00000004100)	PDCL3 (ENSCPOG00000033717) #7	ENSCPOG00000034101 #8	ENSCPOG00000021031 #9	TBC1D8 (ENSCPOG00000027502) #10	CNOT11 (ENSCPOG00000012029) #11	RNF149 (ENSCPOG00000022648) #12	CREG2 (ENSCPOG00000010561) #13	RFX8 (ENSCPOG00000002640) #14	MAP4K4 (ENSCPOG00000011630) #16	IL1R2 (ENSCPOG00000037563) #17	IL1R1 (ENSCPOG00000032016) #18	IL1RL2 (ENSCPOG00000003204) #19	IL1RL1 (ENSCPOG00000013443) #20	IL18R1 (ENSCPOG00000022527) #21	IL18RAP (ENSCPOG00000014120) #22	SLC9A4 (ENSCPOG00000033768) #23	SLC9A2 (ENSCPOG00000007613) #24	MFSD9 (ENSCPOG00000035138) #25	TMEM182 (ENSCPOG00000007626) #26	ENSCPOG00000003373 #27	MRPS9 (ENSCPOG00000013967) #28	GPR45 (ENSCPOG00000035701) #29	TGFBRAP1 (ENSCPOG00000001606) #30	C2orf49 (ENSCPOG00000034878) #31	FHL2 (ENSCPOG00000035187) #32	NCK2 (ENSCPOG00000025206) #33	ECRG4 (ENSCPOG00000008375) #34	UXS1 (ENSCPOG00000008367) #35	ST6GAL2 (ENSCPOG00000015612)	SLC5A7 (ENSCPOG00000027203)
Lagomorpha	ANCESTRAL SPECIES	31	ENSGT00940000156374	ENSGT00950000182974.a.a.a.b	ENSGT00940000157128	ENSGT00510000049213	ENSGT00940000154295 #7	ENSGT00940000160744 #8	ENSGT00950000183030.m.a.a.b.b.a.b.a ##9	ENSGT00940000158977 #10	ENSGT01050000244879.b.a.a #14	ENSGT00940000155063 #16	ENSGT01090000259985.b.b.b.a.a.b #17	ENSGT01090000259985.b.a.b.a.b #18	ENSGT01090000259985.b.a.b.a.a #19	ENSGT01090000259985.b.a.a.a #20	ENSGT01090000259985.b.b.a.a #21	ENSGT01090000259985.b.b.a.b #22	ENSGT00940000160774 #23	ENSGT00940000156807 #24	ENSGT00940000159390 #25	ENSGT00390000017581.b #26	ENSGT00940000163665 #27	ENSGT00390000011204 #28	ENSGT00530000063596.A #30	ENSGT00390000007488 #31	ENSGT00950000183028.a.a.a #32	ENSGT00940000157728.b #33	ENSGT00390000000145 #34	ENSGT00940000157868 #35	ENSGT00940000158714	ENSGT00690000101915	ENSGT00940000160996
Rabbit	MODERN SPECIES	11	NMS (ENSOCUG00000001463)	CHST10 (ENSOCUG00000012868)	PDCL3 (ENSOCUG00000001469) #7	NPAS2 (ENSOCUG00000002384) #8	ENSOCUG00000002392 ##9	TBC1D8 (ENSOCUG00000002398) #10	ENSOCUG00000013058 #12	ENSOCUG00000004448 #11	RFX8 (ENSOCUG00000017895) #14	MAP4K4 (ENSOCUG00000008180) #16	IL1R2 (ENSOCUG00000016746) #17	IL1R1 (ENSOCUG00000006957) #18	IL1RL2 (ENSOCUG00000029557) #19	IL1RL1 (ENSOCUG00000016462) #20	IL18R1 (ENSOCUG00000016476) #21	IL18RAP (ENSOCUG00000006067) #22	SLC9A4 (ENSOCUG00000006075) #23	SLC9A2 (ENSOCUG00000004890) #24	MFSD9 (ENSOCUG00000017011) #25	TMEM182 (ENSOCUG00000017004) #26	POU3F3 (ENSOCUG00000010933) #27	MRPS9 (ENSOCUG00000015017) #28	TGFBRAP1 (ENSOCUG00000015024) #30	C2orf49 (ENSOCUG00000007963) #31	FHL2 (ENSOCUG00000007967) #32	NCK2 (ENSOCUG00000025486) #33	ECRG4 (ENSOCUG00000026304) #34	UXS1 (ENSOCUG00000009982) #35	ENSOCUG00000039579	ST6GAL2 (ENSOCUG00000007726)	SLC5A7 (ENSOCUG00000001049)
Pika	MODERN SPECIES	419																IL18RAP (ENSOPRG00000001252) #22	SLC9A4 (ENSOPRG00000001278) #23	SLC9A2 (ENSOPRG00000001305) #24	TMEM182 (ENSOPRG00000001322) #26