Amniota	ANCESTRAL SPECIES	54								ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00940000155177.b #26	ENSGT00940000155177.a ##26	ENSGT00940000161722 #29	ENSGT00940000158367 #28	ENSGT01030000234540.E #27	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00940000161118	ENSGT00520000055635.c.a	ENSGT00940000159755
Mammalia	ANCESTRAL SPECIES	69	ENSGT00940000159755	ENSGT00520000055635.c.a	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Theria	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT00960000186961	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Eutheria	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a
Primates	ANCESTRAL SPECIES	4	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Mouse lemur	MODERN SPECIES	11	NDUFS2 (ENSMICG00000007269) #7	FCER1G (ENSMICG00000007278) #8	ENSMICG00000035930 #9	TOMM40L (ENSMICG00000007287) #10	NR1I3 (ENSMICG00000007296) #11	PCP4L1 (ENSMICG00000036221) #12	MPZ (ENSMICG00000007313) #13	SDHC (ENSMICG00000007317) #14	CFAP126 (ENSMICG00000045246) #15	ENSMICG00000014956 #16	ENSMICG00000030823 #17	VANGL1 (ENSMICG00000002838) #18	CASQ2 (ENSMICG00000002848) #19	NHLH2 (ENSMICG00000045301) #20	SLC22A15 (ENSMICG00000009801) #21	MAB21L3 (ENSMICG00000032799) #22	ATP1A1 (ENSMICG00000011083) #23	ENSMICG00000042187 #24	CD58 (ENSMICG00000042112) #25	IGSF3 (ENSMICG00000016709) #26	CD2 (ENSMICG00000011899) #27	PTGFRN (ENSMICG00000009691) #28	CD101 (ENSMICG00000009704) #29	ENSMICG00000009715 #30	TRIM45 (ENSMICG00000009751) #31	VTCN1 (ENSMICG00000009755) #32	ENSMICG00000009764 #33	TENT5C (ENSMICG00000001773) #34	GDAP2 (ENSMICG00000001775) #35	WDR3 (ENSMICG00000001783) #36	SPAG17 (ENSMICG00000001795) #37
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Coquerels sifaka	MODERN SPECIES	749														NHLH2 (ENSPCOG00000025921) #20	SLC22A15 (ENSPCOG00000005315) #21	MAB21L3 (ENSPCOG00000018329) #22	ATP1A1 (ENSPCOG00000017672) #23	ENSPCOG00000013877 #25	IGSF3 (ENSPCOG00000017111) #26	CD2 (ENSPCOG00000014420) #27	PTGFRN (ENSPCOG00000013705) #28	CD101 (ENSPCOG00000016049) #29
Greater bamboo lemur	MODERN SPECIES	511	ENSPSMG00000013946	BCAS2 (ENSPSMG00000013954)	DENND2C (ENSPSMG00000013999)	AMPD1 (ENSPSMG00000014033)	NRAS (ENSPSMG00000014097)	CSDE1 (ENSPSMG00000014304)	SIKE1 (ENSPSMG00000014489)	SYCP1 (ENSPSMG00000014676)	TSHB (ENSPSMG00000014734)	TSPAN2 (ENSPSMG00000014758)	NGF (ENSPSMG00000014770)	VANGL1 (ENSPSMG00000014794) #18	CASQ2 (ENSPSMG00000014811) #19	NHLH2 (ENSPSMG00000014821) #20	SLC22A15 (ENSPSMG00000014868) #21	MAB21L3 (ENSPSMG00000014900) #22	ATP1A1 (ENSPSMG00000015000) #23	CD58 (ENSPSMG00000015016) #25	IGSF3 (ENSPSMG00000015029) #26	CD2 (ENSPSMG00000015045) #27	PTGFRN (ENSPSMG00000015068) #28	CD101 (ENSPSMG00000015090) #29	TTF2 (ENSPSMG00000015117)	TRIM45 (ENSPSMG00000015160) #31	VTCN1 (ENSPSMG00000015204) #32	MAN1A2 (ENSPSMG00000015225) #33	ENSPSMG00000015236	TENT5C (ENSPSMG00000015247) #34	GDAP2 (ENSPSMG00000015264) #35	WDR3 (ENSPSMG00000015414) #36	SPAG17 (ENSPSMG00000015573) #37
Bushbaby	MODERN SPECIES	188	DENND2C (ENSOGAG00000007545)	AMPD1 (ENSOGAG00000012124)	NRAS (ENSOGAG00000028680)	CSDE1 (ENSOGAG00000012127)	SIKE1 (ENSOGAG00000005952)	ENSOGAG00000026550	ENSOGAG00000030317	SYCP1 (ENSOGAG00000000392)	TSHB (ENSOGAG00000001448)	TSPAN2 (ENSOGAG00000011521)	NGF (ENSOGAG00000026573)	VANGL1 (ENSOGAG00000014403) #18	CASQ2 (ENSOGAG00000014407) #19	NHLH2 (ENSOGAG00000034540) #20	SLC22A15 (ENSOGAG00000002894) #21	MAB21L3 (ENSOGAG00000002896) #22	ATP1A1 (ENSOGAG00000000187) #23	ENSOGAG00000002250 #25	IGSF3 (ENSOGAG00000017055) #26	CD2 (ENSOGAG00000031305) #27	PTGFRN (ENSOGAG00000005271) #28	CD101 (ENSOGAG00000005273) #29	TTF2 (ENSOGAG00000009039)	TRIM45 (ENSOGAG00000006634) #31	VTCN1 (ENSOGAG00000006636) #32	MAN1A2 (ENSOGAG00000003687) #33	ENSOGAG00000028154	TENT5C (ENSOGAG00000033246) #34	GDAP2 (ENSOGAG00000007395) #35	WDR3 (ENSOGAG00000007399) #36	SPAG17 (ENSOGAG00000007408) #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000153362.b.g	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Gorilla	MODERN SPECIES		ENSGGOG00000041218	DENND2C (ENSGGOG00000008502)	AMPD1 (ENSGGOG00000013805)	NRAS (ENSGGOG00000043922)	CSDE1 (ENSGGOG00000002164)	SIKE1 (ENSGGOG00000015643)	SYCP1 (ENSGGOG00000015556)	TSHB (ENSGGOG00000010389)	TSPAN2 (ENSGGOG00000010083)	ENSGGOG00000040025	ENSGGOG00000037681	ENSGGOG00000026844 #18	CASQ2 (ENSGGOG00000017029) #19	NHLH2 (ENSGGOG00000043451) #20	SLC22A15 (ENSGGOG00000014585) #21	MAB21L3 (ENSGGOG00000002308) #22	ATP1A1 (ENSGGOG00000006738) #23	CD58 (ENSGGOG00000012864) #25	ENSGGOG00000027658	ENSGGOG00000022319 #26	CD2 (ENSGGOG00000005260) #27	PTGFRN (ENSGGOG00000011825) #28	CD101 (ENSGGOG00000008209) #29	TTF2 (ENSGGOG00000015790)	TRIM45 (ENSGGOG00000014996) #31	VTCN1 (ENSGGOG00000025814) #32	MAN1A2 (ENSGGOG00000014278) #33	TENT5C (ENSGGOG00000038013) #34	ENSGGOG00000006897 #35	WDR3 (ENSGGOG00000009982) #36	SPAG17 (ENSGGOG00000012975) #37
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Pan	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Chimpanzee	MODERN SPECIES		BCAS2 (ENSPTRG00000001136)	DENND2C (ENSPTRG00000001137)	AMPD1 (ENSPTRG00000001139)	NRAS (ENSPTRG00000001140)	CSDE1 (ENSPTRG00000033721)	SIKE1 (ENSPTRG00000001142)	SYCP1 (ENSPTRG00000001143)	TSHB (ENSPTRG00000001144)	TSPAN2 (ENSPTRG00000001145)	ENSPTRG00000050090	ENSPTRG00000042869	VANGL1 (ENSPTRG00000001147) #18	CASQ2 (ENSPTRG00000001148) #19	NHLH2 (ENSPTRG00000044281) #20	SLC22A15 (ENSPTRG00000001150) #21	MAB21L3 (ENSPTRG00000001151) #22	ATP1A1 (ENSPTRG00000001152) #23	ENSPTRG00000050070	CD58 (ENSPTRG00000001153) #25	IGSF3 (ENSPTRG00000001154) #26	CD2 (ENSPTRG00000001157) #27	PTGFRN (ENSPTRG00000001158) #28	CD101 (ENSPTRG00000001160) #29	TTF2 (ENSPTRG00000001162)	TRIM45 (ENSPTRG00000001163) #31	VTCN1 (ENSPTRG00000001164) #32	MAN1A2 (ENSPTRG00000024134) #33	TENT5C (ENSPTRG00000049021) #34	GDAP2 (ENSPTRG00000001167) #35	WDR3 (ENSPTRG00000001168) #36	SPAG17 (ENSPTRG00000001170) #37
Bonobo	MODERN SPECIES		BCAS2 (ENSPPAG00000030780)	DENND2C (ENSPPAG00000033748)	AMPD1 (ENSPPAG00000036239)	NRAS (ENSPPAG00000037915)	CSDE1 (ENSPPAG00000025861)	SIKE1 (ENSPPAG00000030969)	SYCP1 (ENSPPAG00000031200)	TSHB (ENSPPAG00000031428)	TSPAN2 (ENSPPAG00000028377)	ENSPPAG00000039894	ENSPPAG00000040918	VANGL1 (ENSPPAG00000037996) #18	CASQ2 (ENSPPAG00000028248) #19	NHLH2 (ENSPPAG00000022478) #20	SLC22A15 (ENSPPAG00000033451) #21	MAB21L3 (ENSPPAG00000037392) #22	ATP1A1 (ENSPPAG00000039938) #23	CD58 (ENSPPAG00000036763) #25	CD2 (ENSPPAG00000030761) #27	PTGFRN (ENSPPAG00000043179) #28	CD101 (ENSPPAG00000032745) #29	TTF2 (ENSPPAG00000027542)	TRIM45 (ENSPPAG00000027104) #31	VTCN1 (ENSPPAG00000023467) #32	MAN1A2 (ENSPPAG00000028925) #33	TENT5C (ENSPPAG00000023449) #34	GDAP2 (ENSPPAG00000028536) #35	WDR3 (ENSPPAG00000029068) #36	ENSPPAG00000033918 #37	TBX15 (ENSPPAG00000035967)	ENSPPAG00000027227
Human	MODERN SPECIES		TRIM33 (ENSG00000197323)	BCAS2 (ENSG00000116752)	DENND2C (ENSG00000175984)	AMPD1 (ENSG00000116748)	NRAS (ENSG00000213281)	CSDE1 (ENSG00000009307)	SIKE1 (ENSG00000052723)	SYCP1 (ENSG00000198765)	TSHB (ENSG00000134200)	TSPAN2 (ENSG00000134198)	NGF (ENSG00000134259)	VANGL1 (ENSG00000173218) #18	CASQ2 (ENSG00000118729) #19	NHLH2 (ENSG00000177551) #20	SLC22A15 (ENSG00000163393) #21	MAB21L3 (ENSG00000173212) #22	ATP1A1 (ENSG00000163399) #23	CD58 (ENSG00000116815) #25	IGSF3 (ENSG00000143061) #26	CD2 (ENSG00000116824) #27	PTGFRN (ENSG00000134247) #28	CD101 (ENSG00000134256) #29	TTF2 (ENSG00000116830)	TRIM45 (ENSG00000134253) #31	VTCN1 (ENSG00000134258) #32	MAN1A2 (ENSG00000198162) #33	TENT5C (ENSG00000183508) #34	GDAP2 (ENSG00000196505) #35	WDR3 (ENSG00000065183) #36	SPAG17 (ENSG00000155761) #37	TBX15 (ENSG00000092607)
Orangutan	MODERN SPECIES		ENSPPYG00000038637	BCAS2 (ENSPPYG00000001000)	DENND2C (ENSPPYG00000000999)	AMPD1 (ENSPPYG00000000998)	NRAS (ENSPPYG00000000997)	CSDE1 (ENSPPYG00000000996)	SIKE1 (ENSPPYG00000037081)	SYCP1 (ENSPPYG00000000994)	ENSPPYG00000000993	TSPAN2 (ENSPPYG00000000992)	NGF (ENSPPYG00000000991)	VANGL1 (ENSPPYG00000000990) #18	CASQ2 (ENSPPYG00000000989) #19	NHLH2 (ENSPPYG00000000988) #20	SLC22A15 (ENSPPYG00000000987) #21	MAB21L3 (ENSPPYG00000000986) #22	ATP1A1 (ENSPPYG00000000985) #23	ENSPPYG00000000983	CD58 (ENSPPYG00000000982) #25	IGSF3 (ENSPPYG00000000981) #26	CD2 (ENSPPYG00000000979) #27	PTGFRN (ENSPPYG00000000978) #28	CD101 (ENSPPYG00000000977) #29	TTF2 (ENSPPYG00000000976)	TRIM45 (ENSPPYG00000000975) #31	VTCN1 (ENSPPYG00000000974) #32	ENSPPYG00000031903	MAN1A2 (ENSPPYG00000000973) #33	TENT5C (ENSPPYG00000000972) #34	GDAP2 (ENSPPYG00000000971) #35	WDR3 (ENSPPYG00000000970) #36
Gibbon	MODERN SPECIES	2	BCAS2 (ENSNLEG00000004737)	DENND2C (ENSNLEG00000004759)	AMPD1 (ENSNLEG00000004786)	NRAS (ENSNLEG00000034325)	CSDE1 (ENSNLEG00000004842)	SIKE1 (ENSNLEG00000004921)	SYCP1 (ENSNLEG00000004923)	TSHB (ENSNLEG00000004959)	TSPAN2 (ENSNLEG00000004961)	ENSNLEG00000035282	ENSNLEG00000030925	VANGL1 (ENSNLEG00000004984) #18	CASQ2 (ENSNLEG00000004999) #19	NHLH2 (ENSNLEG00000027793) #20	SLC22A15 (ENSNLEG00000005012) #21	MAB21L3 (ENSNLEG00000005038) #22	ATP1A1 (ENSNLEG00000005047) #23	CD58 (ENSNLEG00000032597) #25	IGSF3 (ENSNLEG00000005162) #26	CD2 (ENSNLEG00000005167) #27	PTGFRN (ENSNLEG00000005178) #28	CD101 (ENSNLEG00000005188) #29	TTF2 (ENSNLEG00000005209)	TRIM45 (ENSNLEG00000005248) #31	VTCN1 (ENSNLEG00000005256) #32	MAN1A2 (ENSNLEG00000005272) #33	TENT5C (ENSNLEG00000035910) #34	GDAP2 (ENSNLEG00000005283) #35	WDR3 (ENSNLEG00000005304) #36	SPAG17 (ENSNLEG00000033248) #37	TBX15 (ENSNLEG00000005347)
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Vervet Monkey	MODERN SPECIES	12	TRIM33 (ENSCSAG00000001649)	BCAS2 (ENSCSAG00000001652)	DENND2C (ENSCSAG00000001653)	AMPD1 (ENSCSAG00000001655)	NRAS (ENSCSAG00000001656)	CSDE1 (ENSCSAG00000001658)	SIKE1 (ENSCSAG00000001660)	SYCP1 (ENSCSAG00000001672)	TSHB (ENSCSAG00000001678)	TSPAN2 (ENSCSAG00000001681)	NGF (ENSCSAG00000000171)	VANGL1 (ENSCSAG00000001684) #18	CASQ2 (ENSCSAG00000001685) #19	NHLH2 (ENSCSAG00000000172) #20	SLC22A15 (ENSCSAG00000001686) #21	MAB21L3 (ENSCSAG00000001688) #22	ENSCSAG00000001690	ATP1A1 (ENSCSAG00000001691) #23	ENSCSAG00000001692	CD58 (ENSCSAG00000001694) #25	IGSF3 (ENSCSAG00000001695) #26	CD2 (ENSCSAG00000001696) #27	PTGFRN (ENSCSAG00000001697) #28	CD101 (ENSCSAG00000001698) #29	ENSCSAG00000001699 #30	TRIM45 (ENSCSAG00000001700) #31	VTCN1 (ENSCSAG00000001701) #32	MAN1A2 (ENSCSAG00000001702) #33	TENT5C (ENSCSAG00000000173) #34	GDAP2 (ENSCSAG00000001704) #35	WDR3 (ENSCSAG00000001705) #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Macaca	ANCESTRAL SPECIES		ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Pig-tailed macaque	MODERN SPECIES	556	ENSMNEG00000031644	BCAS2 (ENSMNEG00000029335)	DENND2C (ENSMNEG00000035993)	AMPD1 (ENSMNEG00000040685)	NRAS (ENSMNEG00000044823)	CSDE1 (ENSMNEG00000045247)	SIKE1 (ENSMNEG00000013363)	SYCP1 (ENSMNEG00000036344)	TSHB (ENSMNEG00000041678)	TSPAN2 (ENSMNEG00000043519)	NGF (ENSMNEG00000037107)	VANGL1 (ENSMNEG00000030336) #18	CASQ2 (ENSMNEG00000028623) #19	NHLH2 (ENSMNEG00000006709) #20	SLC22A15 (ENSMNEG00000036847) #21	MAB21L3 (ENSMNEG00000044981) #22	ATP1A1 (ENSMNEG00000034326) #23	CD58 (ENSMNEG00000030019) #25	IGSF3 (ENSMNEG00000040709) #26	CD2 (ENSMNEG00000038892) #27	PTGFRN (ENSMNEG00000040097) #28	CD101 (ENSMNEG00000039661) #29	TTF2 (ENSMNEG00000042285)	TRIM45 (ENSMNEG00000035138) #31	ENSMNEG00000043941 #32	MAN1A2 (ENSMNEG00000031399) #33	TENT5C (ENSMNEG00000016833) #34	GDAP2 (ENSMNEG00000041814) #35	WDR3 (ENSMNEG00000039555) #36	SPAG17 (ENSMNEG00000037993) #37	TBX15 (ENSMNEG00000037058)
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT01100000263539.b.b.b.b.b.a.b.a.a.b.b.a.a	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.b.a.b	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Rhesus	MODERN SPECIES		BCAS2 (ENSMMUG00000043063)	DENND2C (ENSMMUG00000014497)	AMPD1 (ENSMMUG00000001978)	NRAS (ENSMMUG00000049105)	CSDE1 (ENSMMUG00000001974)	SIKE1 (ENSMMUG00000001973)	SYCP1 (ENSMMUG00000017674)	TSHB (ENSMMUG00000058261)	TSPAN2 (ENSMMUG00000017421)	NGF (ENSMMUG00000062180)	VANGL1 (ENSMMUG00000008967) #18	CASQ2 (ENSMMUG00000008970) #19	NHLH2 (ENSMMUG00000053366) #20	ENSMMUG00000063202	SLC22A15 (ENSMMUG00000011860) #21	MAB21L3 (ENSMMUG00000000431) #22	ENSMMUG00000041725	ATP1A1 (ENSMMUG00000008151) #23	CD58 (ENSMMUG00000008156) #25	IGSF3 (ENSMMUG00000008157) #26	CD2 (ENSMMUG00000052649) #27	PTGFRN (ENSMMUG00000016900) #28	CD101 (ENSMMUG00000016904) #29	TTF2 (ENSMMUG00000016905)	TRIM45 (ENSMMUG00000015976) #31	VTCN1 (ENSMMUG00000016964) #32	MAN1A2 (ENSMMUG00000047035) #33	TENT5C (ENSMMUG00000004907) #34	GDAP2 (ENSMMUG00000008509) #35	WDR3 (ENSMMUG00000008513) #36	SPAG17 (ENSMMUG00000008519) #37
Crab-eating macaque	MODERN SPECIES		BCAS2 (ENSMFAG00000043933)	DENND2C (ENSMFAG00000035727)	AMPD1 (ENSMFAG00000038085)	NRAS (ENSMFAG00000036827)	CSDE1 (ENSMFAG00000003674)	SIKE1 (ENSMFAG00000059908)	SYCP1 (ENSMFAG00000043913)	TSHB (ENSMFAG00000000330)	TSPAN2 (ENSMFAG00000039698)	NGF (ENSMFAG00000060447)	VANGL1 (ENSMFAG00000000860) #18	CASQ2 (ENSMFAG00000042482) #19	ENSMFAG00000057471 #20	ENSMFAG00000057817	SLC22A15 (ENSMFAG00000042672) #21	MAB21L3 (ENSMFAG00000042466) #22	ENSMFAG00000041093	ATP1A1 (ENSMFAG00000034219) #23	ENSMFAG00000000314	CD58 (ENSMFAG00000042899) #25	IGSF3 (ENSMFAG00000000910) #26	CD2 (ENSMFAG00000036150) #27	PTGFRN (ENSMFAG00000038301) #28	CD101 (ENSMFAG00000033865) #29	ENSMFAG00000042516 #30	TRIM45 (ENSMFAG00000039230) #31	VTCN1 (ENSMFAG00000037561) #32	MAN1A2 (ENSMFAG00000042171) #33	TENT5C (ENSMFAG00000063452) #34	GDAP2 (ENSMFAG00000045882) #35	WDR3 (ENSMFAG00000034570) #36
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Olive baboon	MODERN SPECIES		TRIM33 (ENSPANG00000016076)	BCAS2 (ENSPANG00000019089)	DENND2C (ENSPANG00000024010)	AMPD1 (ENSPANG00000012433)	NRAS (ENSPANG00000008181)	CSDE1 (ENSPANG00000018873)	SIKE1 (ENSPANG00000015792)	SYCP1 (ENSPANG00000012296)	TSPAN2 (ENSPANG00000008556)	NGF (ENSPANG00000048544)	ENSPANG00000038005	VANGL1 (ENSPANG00000000935) #18	CASQ2 (ENSPANG00000004482) #19	NHLH2 (ENSPANG00000001481) #20	SLC22A15 (ENSPANG00000003118) #21	MAB21L3 (ENSPANG00000014173) #22	ENSPANG00000037734	ENSPANG00000039208	ATP1A1 (ENSPANG00000001212) #23	CD58 (ENSPANG00000044886) #25	IGSF3 (ENSPANG00000000305) #26	CD2 (ENSPANG00000015878) #27	PTGFRN (ENSPANG00000023468) #28	CD101 (ENSPANG00000011817) #29	ENSPANG00000012432 #30	TRIM45 (ENSPANG00000012295) #31	ENSPANG00000039901	VTCN1 (ENSPANG00000023608) #32	ENSPANG00000043622	ENSPANG00000042496	ENSPANG00000040057
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00390000008859.b.d.k.a.a	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Sooty mangabey	MODERN SPECIES	246	BCAS2 (ENSCATG00000033204)	DENND2C (ENSCATG00000008808)	AMPD1 (ENSCATG00000036481)	NRAS (ENSCATG00000040984)	CSDE1 (ENSCATG00000036962)	SIKE1 (ENSCATG00000005298)	ENSCATG00000039685	SYCP1 (ENSCATG00000039270)	TSHB (ENSCATG00000039665)	TSPAN2 (ENSCATG00000034149)	NGF (ENSCATG00000017585)	VANGL1 (ENSCATG00000009145) #18	CASQ2 (ENSCATG00000004694) #19	NHLH2 (ENSCATG00000020039) #20	SLC22A15 (ENSCATG00000031862) #21	MAB21L3 (ENSCATG00000034482) #22	ATP1A1 (ENSCATG00000032036) #23	ENSCATG00000032280	CD58 (ENSCATG00000032372) #25	IGSF3 (ENSCATG00000038248) #26	CD2 (ENSCATG00000038663) #27	PTGFRN (ENSCATG00000034409) #28	CD101 (ENSCATG00000040181) #29
Drill	MODERN SPECIES	1360	ENSMLEG00000031821	BCAS2 (ENSMLEG00000036312)	DENND2C (ENSMLEG00000001523)	AMPD1 (ENSMLEG00000032457)	NRAS (ENSMLEG00000039333)	CSDE1 (ENSMLEG00000038673)	SIKE1 (ENSMLEG00000034245)	SYCP1 (ENSMLEG00000027871)	TSHB (ENSMLEG00000040982)	TSPAN2 (ENSMLEG00000036280)	NGF (ENSMLEG00000042620)	VANGL1 (ENSMLEG00000039246) #18	CASQ2 (ENSMLEG00000038887) #19	NHLH2 (ENSMLEG00000026800) #20	SLC22A15 (ENSMLEG00000030172) #21	MAB21L3 (ENSMLEG00000006311) #22	ATP1A1 (ENSMLEG00000030629) #23	CD58 (ENSMLEG00000033488) #25	ENSMLEG00000044327	IGSF3 (ENSMLEG00000000562) #26	CD2 (ENSMLEG00000036866) #27	PTGFRN (ENSMLEG00000033407) #28	CD101 (ENSMLEG00000039483) #29	TTF2 (ENSMLEG00000041549)	TRIM45 (ENSMLEG00000034608) #31	VTCN1 (ENSMLEG00000031487) #32	MAN1A2 (ENSMLEG00000041597) #33	TENT5C (ENSMLEG00000012342) #34	GDAP2 (ENSMLEG00000041705) #35	WDR3 (ENSMLEG00000035516) #36	SPAG17 (ENSMLEG00000043640) #37
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT00940000156361.B	ENSGT00390000008859.b.d.k.a.a	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950.m	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000153362.b.g	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300.c #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Golden snub-nosed monkey	MODERN SPECIES	1359												VANGL1 (ENSRROG00000045595) #18	CASQ2 (ENSRROG00000032390) #19	NHLH2 (ENSRROG00000028198) #20	SLC22A15 (ENSRROG00000038809) #21	MAB21L3 (ENSRROG00000041625) #22	ATP1A1 (ENSRROG00000044731) #23	ENSRROG00000032840	CD58 (ENSRROG00000001604) #25	IGSF3 (ENSRROG00000032335) #26	CD2 (ENSRROG00000023361) #27	PTGFRN (ENSRROG00000044241) #28	CD101 (ENSRROG00000039983) #29	TTF2 (ENSRROG00000013287)	TRIM45 (ENSRROG00000032031) #31	ENSRROG00000034154 #32
Black snub-nosed monkey	MODERN SPECIES	299	TRIM33 (ENSRBIG00000044424)	BCAS2 (ENSRBIG00000036310)	DENND2C (ENSRBIG00000040882)	AMPD1 (ENSRBIG00000042678)	NRAS (ENSRBIG00000043132)	ENSRBIG00000038966	SIKE1 (ENSRBIG00000042450)	SYCP1 (ENSRBIG00000040488)	TSHB (ENSRBIG00000030494)	TSPAN2 (ENSRBIG00000040980)	NGF (ENSRBIG00000043863)	VANGL1 (ENSRBIG00000040389) #18	CASQ2 (ENSRBIG00000044022) #19	NHLH2 (ENSRBIG00000021541) #20	SLC22A15 (ENSRBIG00000008924) #21	MAB21L3 (ENSRBIG00000028983) #22	ATP1A1 (ENSRBIG00000015454) #23	CD58 (ENSRBIG00000044416) #25	ENSRBIG00000035126	IGSF3 (ENSRBIG00000038679) #26	CD2 (ENSRBIG00000042753) #27	PTGFRN (ENSRBIG00000044418) #28	CD101 (ENSRBIG00000034556) #29	TTF2 (ENSRBIG00000042651)	TRIM45 (ENSRBIG00000027871) #31	ENSRBIG00000036563 #32	MAN1A2 (ENSRBIG00000030646) #33	TENT5C (ENSRBIG00000030666) #34	GDAP2 (ENSRBIG00000041462) #35	WDR3 (ENSRBIG00000039149) #36	SPAG17 (ENSRBIG00000041783) #37
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.u.a	ENSGT00390000016950.o.a	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000153362.b.g	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.u.a	ENSGT00390000016950.o.a	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000153362.b.g	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Marmoset	MODERN SPECIES	19	TRIM33 (ENSCJAG00000012339)	BCAS2 (ENSCJAG00000012448)	DENND2C (ENSCJAG00000012467)	AMPD1 (ENSCJAG00000012494)	NRAS (ENSCJAG00000036517)	CSDE1 (ENSCJAG00000012565)	SIKE1 (ENSCJAG00000012663)	SYCP1 (ENSCJAG00000012678)	TSPAN2 (ENSCJAG00000046657)	TSHB (ENSCJAG00000059226)	NGF (ENSCJAG00000070914)	VANGL1 (ENSCJAG00000012756) #18	CASQ2 (ENSCJAG00000012776) #19	NHLH2 (ENSCJAG00000079748) #20	SLC22A15 (ENSCJAG00000012813) #21	MAB21L3 (ENSCJAG00000006194) #22	ENSCJAG00000075676	ENSCJAG00000071068	ATP1A1 (ENSCJAG00000006058) #23	ENSCJAG00000071790	ENSCJAG00000006049	IGSF3 (ENSCJAG00000006006) #26	CD2 (ENSCJAG00000062649) #27	PTGFRN (ENSCJAG00000005961) #28	CD101 (ENSCJAG00000005944) #29	TTF2 (ENSCJAG00000005909)	TRIM45 (ENSCJAG00000005897) #31	VTCN1 (ENSCJAG00000005878) #32	ENSCJAG00000074653	MAN1A2 (ENSCJAG00000005860) #33	TENT5C (ENSCJAG00000039217) #34
Cebidae_a	ANCESTRAL SPECIES	41	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.u.a	ENSGT00390000016950.o.a	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000153362.b.g	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Bolivian squirrel monkey	MODERN SPECIES	98	TRIM33 (ENSSBOG00000032566)	BCAS2 (ENSSBOG00000027778)	DENND2C (ENSSBOG00000030035)	AMPD1 (ENSSBOG00000028352)	NRAS (ENSSBOG00000021039)	CSDE1 (ENSSBOG00000035592)	SIKE1 (ENSSBOG00000021497)	SYCP1 (ENSSBOG00000024910)	TSHB (ENSSBOG00000035791)	TSPAN2 (ENSSBOG00000002008)	NGF (ENSSBOG00000029889)	VANGL1 (ENSSBOG00000032697) #18	CASQ2 (ENSSBOG00000003704) #19	NHLH2 (ENSSBOG00000014733) #20	SLC22A15 (ENSSBOG00000031792) #21	MAB21L3 (ENSSBOG00000035896) #22	ATP1A1 (ENSSBOG00000020417) #23	ENSSBOG00000015813	CD58 (ENSSBOG00000032505) #25	ENSSBOG00000022544	IGSF3 (ENSSBOG00000024073) #26	CD2 (ENSSBOG00000022804) #27	ENSSBOG00000027638	PTGFRN (ENSSBOG00000020242) #28	ENSSBOG00000020480	CD101 (ENSSBOG00000024092) #29	TTF2 (ENSSBOG00000022555)	TRIM45 (ENSSBOG00000033971) #31	VTCN1 (ENSSBOG00000025248) #32	MAN1A2 (ENSSBOG00000027903) #33	TENT5C (ENSSBOG00000019248) #34
Capuchin	MODERN SPECIES	32	ENSCCAG00000021894	DENND2C (ENSCCAG00000021424)	AMPD1 (ENSCCAG00000021136)	NRAS (ENSCCAG00000030765)	ENSCCAG00000036794	SIKE1 (ENSCCAG00000036846)	ENSCCAG00000026846	SYCP1 (ENSCCAG00000034214)	TSHB (ENSCCAG00000029875)	TSPAN2 (ENSCCAG00000035942)	NGF (ENSCCAG00000020128)	VANGL1 (ENSCCAG00000032113) #18	CASQ2 (ENSCCAG00000012372) #19	NHLH2 (ENSCCAG00000017644) #20	SLC22A15 (ENSCCAG00000030828) #21	MAB21L3 (ENSCCAG00000018744) #22	ATP1A1 (ENSCCAG00000036026) #23	CD58 (ENSCCAG00000024820) #25	IGSF3 (ENSCCAG00000035554) #26	CD2 (ENSCCAG00000036008) #27	ENSCCAG00000037368	PTGFRN (ENSCCAG00000034342) #28	CD101 (ENSCCAG00000037110) #29	TTF2 (ENSCCAG00000032675)	TRIM45 (ENSCCAG00000010371) #31	VTCN1 (ENSCCAG00000037336) #32	MAN1A2 (ENSCCAG00000034354) #33	TENT5C (ENSCCAG00000020387) #34	GDAP2 (ENSCCAG00000024697) #35	WDR3 (ENSCCAG00000037237) #36	ENSCCAG00000035368
Mas night monkey	MODERN SPECIES	775											CTTNBP2NL (ENSANAG00000024298)	VANGL1 (ENSANAG00000031103) #18	CASQ2 (ENSANAG00000024042) #19	NHLH2 (ENSANAG00000019186) #20	SLC22A15 (ENSANAG00000034011) #21	MAB21L3 (ENSANAG00000033656) #22	ATP1A1 (ENSANAG00000033098) #23	CD58 (ENSANAG00000024219) #25	IGSF3 (ENSANAG00000034335) #26	CD2 (ENSANAG00000035044) #27	PTGFRN (ENSANAG00000034823) #28	ENSANAG00000029336	CD101 (ENSANAG00000034882) #29	TTF2 (ENSANAG00000020654)	TRIM45 (ENSANAG00000020776) #31	VTCN1 (ENSANAG00000034173) #32	MAN1A2 (ENSANAG00000025558) #33	TENT5C (ENSANAG00000020216) #34	GDAP2 (ENSANAG00000019806) #35	WDR3 (ENSANAG00000033348) #36	SPAG17 (ENSANAG00000023109) #37
Tarsier	MODERN SPECIES	6824													VANGL1 (ENSTSYG00000003526) #18	CASQ2 (ENSTSYG00000006753) #19	SLC22A15 (ENSTSYG00000000493) #21	MAB21L3 (ENSTSYG00000001662) #22
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Glires	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Rodentia	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Sciuridae	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Marmotini	ANCESTRAL SPECIES	62	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Marmotini_b	ANCESTRAL SPECIES	74	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Arctic ground squirrel	MODERN SPECIES	134	BCAS2 (ENSUPAG00010022333)	DENND2C (ENSUPAG00010022334)	AMPD1 (ENSUPAG00010022337)	NRAS (ENSUPAG00010022339)	CSDE1 (ENSUPAG00010022340)	SIKE1 (ENSUPAG00010022488)	ENSUPAG00010022495	SYCP1 (ENSUPAG00010022501)	TSHB (ENSUPAG00010022509)	TSPAN2 (ENSUPAG00010022515)	NGF (ENSUPAG00010022522)	VANGL1 (ENSUPAG00010022525) #18	CASQ2 (ENSUPAG00010022531) #19	NHLH2 (ENSUPAG00010022533) #20	SLC22A15 (ENSUPAG00010022536) #21	MAB21L3 (ENSUPAG00010022542) #22	ATP1A1 (ENSUPAG00010022544) #23
Squirrel	MODERN SPECIES	227			AMPD1 (ENSSTOG00000015082)	NRAS (ENSSTOG00000023151)	ENSSTOG00000032722	SIKE1 (ENSSTOG00000001684)	ENSSTOG00000027072	ENSSTOG00000010304	TSHB (ENSSTOG00000022113)	TSPAN2 (ENSSTOG00000020353)	NGF (ENSSTOG00000005518)	VANGL1 (ENSSTOG00000015734) #18	CASQ2 (ENSSTOG00000015738) #19	NHLH2 (ENSSTOG00000019698) #20	SLC22A15 (ENSSTOG00000016141) #21	MAB21L3 (ENSSTOG00000026516) #22	ATP1A1 (ENSSTOG00000016127) #23	IGSF3 (ENSSTOG00000022906) #26	CD2 (ENSSTOG00000004188) #27	PTGFRN (ENSSTOG00000010916) #28	CD101 (ENSSTOG00000010919) #29	TTF2 (ENSSTOG00000010927)	ENSSTOG00000034928	TRIM45 (ENSSTOG00000007369) #31	VTCN1 (ENSSTOG00000007389) #32	MAN1A2 (ENSSTOG00000016016) #33	TENT5C (ENSSTOG00000010392) #34	GDAP2 (ENSSTOG00000024699) #35	WDR3 (ENSSTOG00000003504) #36	SPAG17 (ENSSTOG00000003532) #37	TBX15 (ENSSTOG00000013040)
Alpin marmot	MODERN SPECIES	79	AMPD1 (ENSMMMG00000014396)	NRAS (ENSMMMG00000014434)	CSDE1 (ENSMMMG00000014448)	SIKE1 (ENSMMMG00000014866)	ENSMMMG00000014870	ENSMMMG00000014879	SYCP1 (ENSMMMG00000014892)	ENSMMMG00000014952	TSHB (ENSMMMG00000014957)	TSPAN2 (ENSMMMG00000014968)	NGF (ENSMMMG00000014973)	VANGL1 (ENSMMMG00000014977) #18	CASQ2 (ENSMMMG00000014991) #19	NHLH2 (ENSMMMG00000015011) #20	SLC22A15 (ENSMMMG00000015020) #21	MAB21L3 (ENSMMMG00000015051) #22	ATP1A1 (ENSMMMG00000015066) #23	IGSF3 (ENSMMMG00000015107) #26	CD2 (ENSMMMG00000015127) #27	PTGFRN (ENSMMMG00000015141) #28	CD101 (ENSMMMG00000015154) #29	TTF2 (ENSMMMG00000015196)	ENSMMMG00000015205	TRIM45 (ENSMMMG00000015213) #31	VTCN1 (ENSMMMG00000015255) #32	MAN1A2 (ENSMMMG00000015283) #33	TENT5C (ENSMMMG00000015304) #34	GDAP2 (ENSMMMG00000015308) #35	WDR3 (ENSMMMG00000015336) #36	ENSMMMG00000015354 #37	TBX15 (ENSMMMG00000015373)
Eurasian red squirrel	MODERN SPECIES		DENND2C (ENSSVLG00005000379)	AMPD1 (ENSSVLG00005000465)	ENSSVLG00005000492	CSDE1 (ENSSVLG00005000559)	SIKE1 (ENSSVLG00005000707)	ENSSVLG00005000743	SYCP1 (ENSSVLG00005000819)	TSHB (ENSSVLG00005000935)	TSPAN2 (ENSSVLG00005000967)	NGF (ENSSVLG00005001008)	ENSSVLG00005001021	VANGL1 (ENSSVLG00005001032) #18	CASQ2 (ENSSVLG00005001056) #19	NHLH2 (ENSSVLG00005001085) #20	SLC22A15 (ENSSVLG00005001098) #21	MAB21L3 (ENSSVLG00005001135) #22	ATP1A1 (ENSSVLG00005001182) #23	ENSSVLG00005001215 #24	IGSF3 (ENSSVLG00005001236) #26	CD2 (ENSSVLG00005001265) #27	PTGFRN (ENSSVLG00005001283) #28	CD101 (ENSSVLG00005001302) #29	ENSSVLG00005001327	ENSSVLG00005001350	TRIM45 (ENSSVLG00005001388) #31	VTCN1 (ENSSVLG00005001433) #32	MAN1A2 (ENSSVLG00005001469) #33	TENT5C (ENSSVLG00005001495) #34	GDAP2 (ENSSVLG00005001518) #35	ENSSVLG00005001561	WDR3 (ENSSVLG00005001572) #36
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A.i
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000009388	CSDE1 (ENSHGLG00000009620)	SIKE1 (ENSHGLG00000015408)	ENSHGLG00000032648	ENSHGLG00000004974	ENSHGLG00000047308	ENSHGLG00000006103	TSHB (ENSHGLG00000014600)	TSPAN2 (ENSHGLG00000010786)	NGF (ENSHGLG00000044577)	ENSHGLG00000032979	VANGL1 (ENSHGLG00000016399) #18	CASQ2 (ENSHGLG00000038257) #19	NHLH2 (ENSHGLG00000046588) #20	SLC22A15 (ENSHGLG00000011061) #21	MAB21L3 (ENSHGLG00000009205) #22	ATP1A1 (ENSHGLG00000009304) #23	IGSF3 (ENSHGLG00000018539) #26	CD2 (ENSHGLG00000014947) #27	PTGFRN (ENSHGLG00000019106) #28	CD101 (ENSHGLG00000018298) #29	TTF2 (ENSHGLG00000012459)	TRIM45 (ENSHGLG00000017735) #31	VTCN1 (ENSHGLG00000018792) #32	ENSHGLG00000045985	MAN1A2 (ENSHGLG00000017646) #33	FAM46C (ENSHGLG00000043157) #34	ENSHGLG00000041120	ENSHGLG00000017537 #35	WDR3 (ENSHGLG00000017936) #36	SPAG17 (ENSHGLG00000009162) #37
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000167338	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Guinea pig	MODERN SPECIES	2	BCAS2 (ENSCPOG00000020532)	DENND2C (ENSCPOG00000012944)	AMPD1 (ENSCPOG00000002591)	NRAS (ENSCPOG00000021833)	CSDE1 (ENSCPOG00000040388)	SIKE1 (ENSCPOG00000007406)	ENSCPOG00000009115	SYCP1 (ENSCPOG00000012690)	TSHB (ENSCPOG00000030694)	TSPAN2 (ENSCPOG00000008376)	NGF (ENSCPOG00000024033)	VANGL1 (ENSCPOG00000001701) #18	CASQ2 (ENSCPOG00000001703) #19	NHLH2 (ENSCPOG00000026593) #20	SLC22A15 (ENSCPOG00000009506) #21	MAB21L3 (ENSCPOG00000009511) #22	ATP1A1 (ENSCPOG00000000927) #23	IGSF3 (ENSCPOG00000002029) #26	CD2 (ENSCPOG00000036418) #27	PTGFRN (ENSCPOG00000015740) #28	CD101 (ENSCPOG00000015741) #29	ENSCPOG00000000605 #30	VTCN1 (ENSCPOG00000034001) #32	MAN1A2 (ENSCPOG00000004935) #33	TENT5C (ENSCPOG00000035573) #34	GDAP2 (ENSCPOG00000012599) #35	WDR3 (ENSCPOG00000011305) #36	SPAG17 (ENSCPOG00000011317) #37	TBX15 (ENSCPOG00000000615)	WARS2 (ENSCPOG00000000616)	ENSCPOG00000001451
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000167338	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A.i
Long-tailed chinchilla	MODERN SPECIES	142	DENND2C (ENSCLAG00000006608)	AMPD1 (ENSCLAG00000006645)	NRAS (ENSCLAG00000005888)	CSDE1 (ENSCLAG00000006618)	SIKE1 (ENSCLAG00000005344)	ENSCLAG00000006997	ENSCLAG00000013132	ENSCLAG00000004900	TSHB (ENSCLAG00000011105)	TSPAN2 (ENSCLAG00000007865)	NGF (ENSCLAG00000004815)	VANGL1 (ENSCLAG00000006270) #18	CASQ2 (ENSCLAG00000007972) #19	NHLH2 (ENSCLAG00000005691) #20	SLC22A15 (ENSCLAG00000006619) #21	MAB21L3 (ENSCLAG00000004428) #22	ATP1A1 (ENSCLAG00000005733) #23	IGSF3 (ENSCLAG00000006923) #26	CD2 (ENSCLAG00000007838) #27	PTGFRN (ENSCLAG00000008229) #28	CD101 (ENSCLAG00000010019) #29	ENSCLAG00000014230	TRIM45 (ENSCLAG00000010898) #31	VTCN1 (ENSCLAG00000014982) #32	MAN1A2 (ENSCLAG00000008573) #33	TENT5C (ENSCLAG00000006985) #34	ENSCLAG00000007247	GDAP2 (ENSCLAG00000008843) #35	WDR3 (ENSCLAG00000010657) #36	SPAG17 (ENSCLAG00000006388) #37	TBX15 (ENSCLAG00000008292)
Degu	MODERN SPECIES	181	NRAS (ENSODEG00000007937)	ENSODEG00000007383	SIKE1 (ENSODEG00000007343)	ENSODEG00000010107	SYCP1 (ENSODEG00000006927)	TSHB (ENSODEG00000009005)	TSPAN2 (ENSODEG00000007319)	NGF (ENSODEG00000006538)	ENSODEG00000006379	ENSODEG00000008957	ENSODEG00000008559	VANGL1 (ENSODEG00000010599) #18	CASQ2 (ENSODEG00000009014) #19	NHLH2 (ENSODEG00000008157) #20	SLC22A15 (ENSODEG00000007565) #21	MAB21L3 (ENSODEG00000005924) #22	ATP1A1 (ENSODEG00000006810) #23	ENSODEG00000006132	IGSF3 (ENSODEG00000007439) #26	ENSODEG00000006855	PTGFRN (ENSODEG00000006807) #28	CD101 (ENSODEG00000006286) #29	ENSODEG00000006362	TRIM45 (ENSODEG00000007020) #31	VTCN1 (ENSODEG00000006757) #32	MAN1A2 (ENSODEG00000005674) #33	TENT5C (ENSODEG00000006187) #34	ENSODEG00000005813
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Muroidea	ANCESTRAL SPECIES	6	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000165376	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000165376	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Golden Hamster	MODERN SPECIES	681	Bcas2 (ENSMAUG00000013855)	Dennd2c (ENSMAUG00000013289)	Ampd1 (ENSMAUG00000001096)	Nras (ENSMAUG00000019927)	Csde1 (ENSMAUG00000014031)	Sike1 (ENSMAUG00000012482)	Nr1h5 (ENSMAUG00000010803)	Sycp1 (ENSMAUG00000000328)	Tshb (ENSMAUG00000005156)	Tspan2 (ENSMAUG00000004539)	ENSMAUG00000002276	Vangl1 (ENSMAUG00000009480) #18	Casq2 (ENSMAUG00000000284) #19	Nhlh2 (ENSMAUG00000016936) #20	Slc22a15 (ENSMAUG00000010758) #21	Mab21l3 (ENSMAUG00000009568) #22	ENSMAUG00000008452	Atp1a1 (ENSMAUG00000017136) #23	ENSMAUG00000017849	Igsf3 (ENSMAUG00000013987) #26	Cd2 (ENSMAUG00000012774) #27	Ptgfrn (ENSMAUG00000002851) #28	Cd101 (ENSMAUG00000017674) #29	ENSMAUG00000016725	Trim45 (ENSMAUG00000013623) #31	Vtcn1 (ENSMAUG00000015061) #32	Man1a2 (ENSMAUG00000000417) #33	Tent5c (ENSMAUG00000017728) #34	ENSMAUG00000017297	Gdap2 (ENSMAUG00000014132) #35	Wdr3 (ENSMAUG00000002574) #36
Chinese hamster chok1gshd	MODERN SPECIES	66	Ampd1 (ENSCGRG00001014246)	Nras (ENSCGRG00001020093)	ENSCGRG00001016833	ENSCGRG00001011859	Sike1 (ENSCGRG00001023509)	Nr1h5 (ENSCGRG00001022882)	Sycp1 (ENSCGRG00001010102)	ENSCGRG00001006375	Tshb (ENSCGRG00001012202)	Tspan2 (ENSCGRG00001014655)	Ngf (ENSCGRG00001000250)	Vangl1 (ENSCGRG00001022127) #18	Casq2 (ENSCGRG00001013746) #19	Nhlh2 (ENSCGRG00001009328) #20	Slc22a15 (ENSCGRG00001018525) #21	Mab21l3 (ENSCGRG00001018373) #22	Atp1a1 (ENSCGRG00001024330) #23	Igsf3 (ENSCGRG00001017829) #26	Cd2 (ENSCGRG00001019348) #27	Ptgfrn (ENSCGRG00001022148) #28	Cd101 (ENSCGRG00001024359) #29	ENSCGRG00001006277	Trim45 (ENSCGRG00001000157) #31	Vtcn1 (ENSCGRG00001015357) #32	Man1a2 (ENSCGRG00001020266) #33	Tent5c (ENSCGRG00001005586) #34	Gdap2 (ENSCGRG00001012369) #35	Wdr3 (ENSCGRG00001019544) #36	Spag17 (ENSCGRG00001013560) #37	Tbx15 (ENSCGRG00001024224)	Wars2 (ENSCGRG00001018718)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Northern American deer mouse	MODERN SPECIES	19	Bcas2 (ENSPEMG00000023530)	Dennd2c (ENSPEMG00000002658)	Ampd1 (ENSPEMG00000017567)	Nras (ENSPEMG00000029639)	Csde1 (ENSPEMG00000020357)	Sike1 (ENSPEMG00000020550)	Nr1h5 (ENSPEMG00000021165)	Sycp1 (ENSPEMG00000023338)	Tshb (ENSPEMG00000024182)	Tspan2 (ENSPEMG00000023387)	Ngf (ENSPEMG00000001587)	Vangl1 (ENSPEMG00000026640) #18	Casq2 (ENSPEMG00000012959) #19	Nhlh2 (ENSPEMG00000025983) #20	Slc22a15 (ENSPEMG00000023603) #21	Mab21l3 (ENSPEMG00000023035) #22	Atp1a1 (ENSPEMG00000010999) #23	Igsf3 (ENSPEMG00000011916) #26	Cd2 (ENSPEMG00000018550) #27	Ptgfrn (ENSPEMG00000009682) #28	Cd101 (ENSPEMG00000008402) #29	ENSPEMG00000010330	ENSPEMG00000010451 #30	Trim45 (ENSPEMG00000007787) #31	ENSPEMG00000027103 #32	Man1a2 (ENSPEMG00000007670) #33	ENSPEMG00000031182 #34	Gdap2 (ENSPEMG00000020913) #35	Wdr3 (ENSPEMG00000011928) #36	Spag17 (ENSPEMG00000012291) #37	Tbx15 (ENSPEMG00000026645)
Prairie vole	MODERN SPECIES	8	Dennd2c (ENSMOCG00000009830)	Ampd1 (ENSMOCG00000010785)	Nras (ENSMOCG00000022441)	Csde1 (ENSMOCG00000018960)	ENSMOCG00000009367	Sike1 (ENSMOCG00000000516)	Nr1h5 (ENSMOCG00000012316)	Sycp1 (ENSMOCG00000009622)	Tshb (ENSMOCG00000006126)	Tspan2 (ENSMOCG00000003591)	Ngf (ENSMOCG00000021179)	Vangl1 (ENSMOCG00000018281) #18	Casq2 (ENSMOCG00000014851) #19	Nhlh2 (ENSMOCG00000007572) #20	ENSMOCG00000020465 #21	Mab21l3 (ENSMOCG00000016617) #22	Atp1a1 (ENSMOCG00000006963) #23	Igsf3 (ENSMOCG00000005813) #26	Ptgfrn (ENSMOCG00000020768) #28	Ttf2 (ENSMOCG00000008415)	Trim45 (ENSMOCG00000000422) #31	Vtcn1 (ENSMOCG00000000748) #32	Man1a2 (ENSMOCG00000020901) #33	Tent5c (ENSMOCG00000018840) #34	Gdap2 (ENSMOCG00000011700) #35	Wdr3 (ENSMOCG00000014361) #36	Spag17 (ENSMOCG00000001590) #37	ENSMOCG00000009935	Tbx15 (ENSMOCG00000012596)	Wars2 (ENSMOCG00000005144)	ENSMOCG00000020989
Murinae	ANCESTRAL SPECIES	5	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Mus	ANCESTRAL SPECIES	7	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.d	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Steppe mouse	MODERN SPECIES	3036												Casq2 (ENSMSIG00000017951) #19	ENSMSIG00000017944	Nhlh2 (ENSMSIG00000017937) #20	Slc22a15 (ENSMSIG00000017867) #21	Mab21l3 (ENSMSIG00000017843) #22	ENSMSIG00000017831	Atp1a1 (ENSMSIG00000017781) #23	Igsf3 (ENSMSIG00000017718) #26	Cd2 (ENSMSIG00000017692) #27	Ptgfrn (ENSMSIG00000017639) #28	Cd101 (ENSMSIG00000017562) #29	Ttf2 (ENSMSIG00000017516)	ENSMSIG00000017406 #31	Vtcn1 (ENSMSIG00000017388) #32	Man1a2 (ENSMSIG00000017361) #33	Tent5c (ENSMSIG00000017352) #34
spretus	MODERN SPECIES	12	Bcas2 (MGP_SPRETEiJ_G0026398)	Dennd2c (MGP_SPRETEiJ_G0026397)	Ampd1 (MGP_SPRETEiJ_G0026396)	Nras (MGP_SPRETEiJ_G0026395)	Csde1 (MGP_SPRETEiJ_G0026394)	Sike1 (MGP_SPRETEiJ_G0026393)	Nr1h5 (MGP_SPRETEiJ_G0026392)	Sycp1 (MGP_SPRETEiJ_G0026391)	Tshb (MGP_SPRETEiJ_G0026390)	Tspan2 (MGP_SPRETEiJ_G0026389)	Ngf (MGP_SPRETEiJ_G0026388)	Vangl1 (MGP_SPRETEiJ_G0026387) #18	Casq2 (MGP_SPRETEiJ_G0026386) #19	Nhlh2 (MGP_SPRETEiJ_G0026385) #20	Slc22a15 (MGP_SPRETEiJ_G0026384) #21	Mab21l3 (MGP_SPRETEiJ_G0026383) #22	Atp1a1 (MGP_SPRETEiJ_G0026382) #23	Igsf3 (MGP_SPRETEiJ_G0026381) #26	Cd2 (MGP_SPRETEiJ_G0026380) #27	Ptgfrn (MGP_SPRETEiJ_G0026379) #28	Cd101 (MGP_SPRETEiJ_G0026378) #29	Ttf2 (MGP_SPRETEiJ_G0026377)	Trim45 (MGP_SPRETEiJ_G0026376) #31	Vtcn1 (MGP_SPRETEiJ_G0026375) #32	Man1a2 (MGP_SPRETEiJ_G0026374) #33	Tent5c (MGP_SPRETEiJ_G0026373) #34	Gdap2 (MGP_SPRETEiJ_G0026372) #35	Wdr3 (MGP_SPRETEiJ_G0026371) #36	Spag17 (MGP_SPRETEiJ_G0026370) #37	Tbx15 (MGP_SPRETEiJ_G0026369)	Wars2 (MGP_SPRETEiJ_G0026368)
Mouse	MODERN SPECIES	12	Bcas2 (ENSMUSG00000005687)	Dennd2c (ENSMUSG00000007379)	Ampd1 (ENSMUSG00000070385)	Nras (ENSMUSG00000027852)	Csde1 (ENSMUSG00000068823)	Sike1 (ENSMUSG00000027854)	Nr1h5 (ENSMUSG00000048938)	Sycp1 (ENSMUSG00000027855)	Tshb (ENSMUSG00000027857)	Tspan2 (ENSMUSG00000027858)	Ngf (ENSMUSG00000027859)	Vangl1 (ENSMUSG00000027860) #18	Casq2 (ENSMUSG00000027861) #19	Nhlh2 (ENSMUSG00000048540) #20	Slc22a15 (ENSMUSG00000033147) #21	Mab21l3 (ENSMUSG00000044313) #22	Atp1a1 (ENSMUSG00000033161) #23	Igsf3 (ENSMUSG00000042035) #26	Cd2 (ENSMUSG00000027863) #27	Ptgfrn (ENSMUSG00000027864) #28	Cd101 (ENSMUSG00000086564) #29	Ttf2 (ENSMUSG00000033222)	Trim45 (ENSMUSG00000033233) #31	Vtcn1 (ENSMUSG00000051076) #32	Man1a2 (ENSMUSG00000008763) #33	Tent5c (ENSMUSG00000044468) #34	Gdap2 (ENSMUSG00000027865) #35	Wdr3 (ENSMUSG00000033285) #36	Spag17 (ENSMUSG00000027867) #37	Tbx15 (ENSMUSG00000027868)	Wars2 (ENSMUSG00000004233)
Ryukyu mouse	MODERN SPECIES	12	Bcas2 (MGP_CAROLIEiJ_G0025448)	Dennd2c (MGP_CAROLIEiJ_G0025447)	Ampd1 (MGP_CAROLIEiJ_G0025446)	Nras (MGP_CAROLIEiJ_G0025445)	Csde1 (MGP_CAROLIEiJ_G0025444)	Sike1 (MGP_CAROLIEiJ_G0025443)	Nr1h5 (MGP_CAROLIEiJ_G0025442)	MGP_CAROLIEiJ_G0025441	Tshb (MGP_CAROLIEiJ_G0025440)	Tspan2 (MGP_CAROLIEiJ_G0025439)	Ngf (MGP_CAROLIEiJ_G0025438)	Vangl1 (MGP_CAROLIEiJ_G0025437) #18	Casq2 (MGP_CAROLIEiJ_G0025436) #19	Nhlh2 (MGP_CAROLIEiJ_G0025435) #20	Slc22a15 (MGP_CAROLIEiJ_G0025434) #21	Mab21l3 (MGP_CAROLIEiJ_G0025433) #22	Atp1a1 (MGP_CAROLIEiJ_G0025432) #23	Igsf3 (MGP_CAROLIEiJ_G0025431) #26	Cd2 (MGP_CAROLIEiJ_G0025430) #27	Ptgfrn (MGP_CAROLIEiJ_G0025429) #28	Cd101 (MGP_CAROLIEiJ_G0025428) #29	Ttf2 (MGP_CAROLIEiJ_G0025427)	MGP_CAROLIEiJ_G0025426 #31	Vtcn1 (MGP_CAROLIEiJ_G0025425) #32	Man1a2 (MGP_CAROLIEiJ_G0025424) #33	Tent5c (MGP_CAROLIEiJ_G0025423) #34	Gdap2 (MGP_CAROLIEiJ_G0025422) #35	Wdr3 (MGP_CAROLIEiJ_G0025421) #36	Spag17 (MGP_CAROLIEiJ_G0025420) #37	Tbx15 (MGP_CAROLIEiJ_G0025419)	MGP_CAROLIEiJ_G0025418
Shrew mouse	MODERN SPECIES	17	Bcas2 (MGP_PahariEiJ_G0026892)	Dennd2c (MGP_PahariEiJ_G0026891)	Ampd1 (MGP_PahariEiJ_G0026890)	Nras (MGP_PahariEiJ_G0026889)	Csde1 (MGP_PahariEiJ_G0026888)	Sike1 (MGP_PahariEiJ_G0026887)	Nr1h5 (MGP_PahariEiJ_G0026886)	Sycp1 (MGP_PahariEiJ_G0026885)	Tshb (MGP_PahariEiJ_G0026884)	Tspan2 (MGP_PahariEiJ_G0026883)	Ngf (MGP_PahariEiJ_G0026882)	Vangl1 (MGP_PahariEiJ_G0026881) #18	Casq2 (MGP_PahariEiJ_G0026880) #19	Nhlh2 (MGP_PahariEiJ_G0026879) #20	Slc22a15 (MGP_PahariEiJ_G0026878) #21	Mab21l3 (MGP_PahariEiJ_G0026877) #22	Atp1a1 (MGP_PahariEiJ_G0026876) #23	Igsf3 (MGP_PahariEiJ_G0026875) #26	Cd2 (MGP_PahariEiJ_G0026874) #27	Ptgfrn (MGP_PahariEiJ_G0026873) #28	Cd101 (MGP_PahariEiJ_G0026872) #29	Ttf2 (MGP_PahariEiJ_G0026871)	MGP_PahariEiJ_G0026870 #31	Vtcn1 (MGP_PahariEiJ_G0026869) #32	Man1a2 (MGP_PahariEiJ_G0026868) #33	Tent5c (MGP_PahariEiJ_G0026867) #34	Gdap2 (MGP_PahariEiJ_G0026866) #35	Wdr3 (MGP_PahariEiJ_G0026865) #36	Spag17 (MGP_PahariEiJ_G0026864) #37	Tbx15 (MGP_PahariEiJ_G0026863)	Wars2 (MGP_PahariEiJ_G0026862)
Rat	MODERN SPECIES	11	Bcas2 (ENSRNOG00000018783)	Dennd2c (ENSRNOG00000018716)	Ampd1 (ENSRNOG00000018656)	Nras (ENSRNOG00000023079)	Csde1 (ENSRNOG00000061058)	Sike1 (ENSRNOG00000017502)	Nr1h5 (ENSRNOG00000023073)	Sycp1 (ENSRNOG00000016835)	Tshb (ENSRNOG00000016793)	Tspan2 (ENSRNOG00000023338)	Ngf (ENSRNOG00000016571)	Vangl1 (ENSRNOG00000016477) #18	Casq2 (ENSRNOG00000016243) #19	Nhlh2 (ENSRNOG00000054375) #20	Slc22a15 (ENSRNOG00000033051) #21	Mab21l3 (ENSRNOG00000016044) #22	Atp1a1 (ENSRNOG00000030019) #23	Igsf3 (ENSRNOG00000023851) #26	Cd2 (ENSRNOG00000015821) #27	ENSRNOG00000069649	Ptgfrn (ENSRNOG00000015655) #28	Cd101 (ENSRNOG00000037190) #29	Ttf2 (ENSRNOG00000057761)	Trim45 (ENSRNOG00000015347) #31	Vtcn1 (ENSRNOG00000015279) #32	ENSRNOG00000067753	Man1a2 (ENSRNOG00000015226) #33	Tent5c (ENSRNOG00000070242) #34	Gdap2 (ENSRNOG00000019754) #35	Wdr3 (ENSRNOG00000019670) #36	Spag17 (ENSRNOG00000037196) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	868	Bcas2 (ENSNGAG00000011988)	Dennd2c (ENSNGAG00000023499)	Ampd1 (ENSNGAG00000023553)	Nras (ENSNGAG00000007289)	ENSNGAG00000021929	Sike1 (ENSNGAG00000016770)	Nr1h5 (ENSNGAG00000010800)	Sycp1 (ENSNGAG00000012549)	Tshb (ENSNGAG00000001574)	Tspan2 (ENSNGAG00000014905)	Ngf (ENSNGAG00000018398)	Vangl1 (ENSNGAG00000021078) #18	Casq2 (ENSNGAG00000012360) #19	Nhlh2 (ENSNGAG00000022644) #20	ENSNGAG00000017546 #21	Mab21l3 (ENSNGAG00000013724) #22	Atp1a1 (ENSNGAG00000022692) #23	Igsf3 (ENSNGAG00000024078) #26	Cd2 (ENSNGAG00000015298) #27
Lesser Egyptian jerboa	MODERN SPECIES	144	Dennd2c (ENSJJAG00000009709)	Ampd1 (ENSJJAG00000021675)	ENSJJAG00000020941	Csde1 (ENSJJAG00000019571)	ENSJJAG00000019089	Nr1h5 (ENSJJAG00000018578)	ENSJJAG00000018067	Tshb (ENSJJAG00000001329)	Tspan2 (ENSJJAG00000000832)	Ngf (ENSJJAG00000022901)	ENSJJAG00000021722	Vangl1 (ENSJJAG00000021462) #18	Casq2 (ENSJJAG00000020862) #19	Nhlh2 (ENSJJAG00000019983) #20	Slc22a15 (ENSJJAG00000000255) #21	Mab21l3 (ENSJJAG00000022482) #22	Atp1a1 (ENSJJAG00000020791) #23	Igsf3 (ENSJJAG00000017489) #26	Cd2 (ENSJJAG00000019842) #27	Ptgfrn (ENSJJAG00000019616) #28	Ttf2 (ENSJJAG00000015225)	Trim45 (ENSJJAG00000007227) #31	Vtcn1 (ENSJJAG00000019207) #32	ENSJJAG00000018170	Man1a2 (ENSJJAG00000017865) #33	Tent5c (ENSJJAG00000013174) #34	ENSJJAG00000017333	ENSJJAG00000014767	ENSJJAG00000013768	ENSJJAG00000013505 #35	Wdr3 (ENSJJAG00000013861) #36
Kangaroo rat	MODERN SPECIES	397	Trim33 (ENSDORG00000005438)	Bcas2 (ENSDORG00000014220)	Dennd2c (ENSDORG00000014222)	Ampd1 (ENSDORG00000005377)	Nras (ENSDORG00000025267)	Csde1 (ENSDORG00000011609)	Sike1 (ENSDORG00000005162)	ENSDORG00000027896	Tshb (ENSDORG00000003238)	Tspan2 (ENSDORG00000003239)	Ngf (ENSDORG00000025001)	Vangl1 (ENSDORG00000013118) #18	Casq2 (ENSDORG00000013122) #19	ENSDORG00000010026 #21	ENSDORG00000028402 #21	Mab21l3 (ENSDORG00000010259) #22	Atp1a1 (ENSDORG00000028959) #23	Igsf3 (ENSDORG00000010085) #26	Ptgfrn (ENSDORG00000013777) #28	Cd101 (ENSDORG00000013779) #29	Ttf2 (ENSDORG00000013781)	Vtcn1 (ENSDORG00000013786) #32	Man1a2 (ENSDORG00000025695) #33	Tent5c (ENSDORG00000010159) #34	Gdap2 (ENSDORG00000001079) #35	Wdr3 (ENSDORG00000011031) #36	Spag17 (ENSDORG00000011032) #37	ENSDORG00000023254	Tbx15 (ENSDORG00000005620)	Wars2 (ENSDORG00000008562)	Hao2 (ENSDORG00000003236)
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368.c.b	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Rabbit	MODERN SPECIES	4	BCAS2 (ENSOCUG00000016784)	DENND2C (ENSOCUG00000016789)	AMPD1 (ENSOCUG00000016424)	NRAS (ENSOCUG00000022455)	CSDE1 (ENSOCUG00000016438)	SIKE1 (ENSOCUG00000016457)	ENSOCUG00000023188	ENSOCUG00000022499	ENSOCUG00000016463	Tshb (ENSOCUG00000023876)	TSPAN2 (ENSOCUG00000001279)	NGF (ENSOCUG00000000659)	VANGL1 (ENSOCUG00000016240) #18	CASQ2 (ENSOCUG00000010594) #19	SLC22A15 (ENSOCUG00000015370) #21	MAB21L3 (ENSOCUG00000015382) #22	ATP1A1 (ENSOCUG00000001324) #23	IGSF3 (ENSOCUG00000005284) #26	CD2 (ENSOCUG00000008474) #27	PTGFRN (ENSOCUG00000000608) #28	CD101 (ENSOCUG00000000612) #29	TTF2 (ENSOCUG00000000613)	TRIM45 (ENSOCUG00000000237) #31	VTCN1 (ENSOCUG00000026343) #32	MAN1A2 (ENSOCUG00000012648) #33	ENSOCUG00000026654	ENSOCUG00000027717	GDAP2 (ENSOCUG00000007568) #35	WDR3 (ENSOCUG00000007572) #36	SPAG17 (ENSOCUG00000007586) #37	TBX15 (ENSOCUG00000012320)
Tree shrew	MODERN SPECIES	3915																MAB21L3 (ENSTBEG00000012425) #22
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a
Eulipotyphla	ANCESTRAL SPECIES	1505															ENSGT00940000160364 #21	ENSGT01050000244827.B #22
Hedgehog	MODERN SPECIES	5564															SLC22A15 (ENSEEUG00000003381) #21	ENSEEUG00000003458 #22
Common shrew	MODERN SPECIES	5333																MAB21L3 (ENSSARG00000014048) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a.j
Artiodactyla	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Suina	ANCESTRAL SPECIES	32	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Chacoan peccary	MODERN SPECIES	29	NKAPD1 (ENSCWAG00000003402)	TIMM8B (ENSCWAG00000003395)	SDHD (ENSCWAG00000003372)	IL18 (ENSCWAG00000003351)	TEX12 (ENSCWAG00000003333)	BCO2 (ENSCWAG00000003115)	ENSCWAG00000003073	ENSCWAG00000003060	TSHB (ENSCWAG00000003050)	TSPAN2 (ENSCWAG00000003035)	NGF (ENSCWAG00000003021)	VANGL1 (ENSCWAG00000002974) #18	CASQ2 (ENSCWAG00000002945) #19	NHLH2 (ENSCWAG00000002933) #20	SLC22A15 (ENSCWAG00000002907) #21	MAB21L3 (ENSCWAG00000002889) #22	ATP1A1 (ENSCWAG00000002813) #23	ENSCWAG00000002786 #25	IGSF3 (ENSCWAG00000002762) #26	ENSCWAG00000002742	PTGFRN (ENSCWAG00000002730) #28	CD101 (ENSCWAG00000002714) #29	TTF2 (ENSCWAG00000002699)	TRIM45 (ENSCWAG00000002677) #31	VTCN1 (ENSCWAG00000002628) #32	MAN1A2 (ENSCWAG00000002585) #33	TENT5C (ENSCWAG00000002576) #34	GDAP2 (ENSCWAG00000002542) #35	WDR3 (ENSCWAG00000002500) #36	SPAG17 (ENSCWAG00000002431) #37	TBX15 (ENSCWAG00000002391)
Pig	MODERN SPECIES	12	BCAS2 (ENSSSCG00000055502)	DENND2C (ENSSSCG00000006755)	AMPD1 (ENSSSCG00000006754)	NRAS (ENSSSCG00000032477)	CSDE1 (ENSSSCG00000006752)	SIKE1 (ENSSSCG00000006751)	SYCP1 (ENSSSCG00000006750)	TSHB (ENSSSCG00000006749)	TSPAN2 (ENSSSCG00000006748)	NGF (ENSSSCG00000032417)	ENSSSCG00000042421	VANGL1 (ENSSSCG00000006746) #18	CASQ2 (ENSSSCG00000061647) #19	NHLH2 (ENSSSCG00000006744) #20	SLC22A15 (ENSSSCG00000006743) #21	MAB21L3 (ENSSSCG00000006742) #22	ATP1A1 (ENSSSCG00000006740) #23	ENSSSCG00000040692	CD58 (ENSSSCG00000006738) #25	IGSF3 (ENSSSCG00000006737) #26	CD2 (ENSSSCG00000006736) #27	PTGFRN (ENSSSCG00000006735) #28	CD101 (ENSSSCG00000006734) #29	TTF2 (ENSSSCG00000006733)	TRIM45 (ENSSSCG00000006732) #31	ENSSSCG00000044178	VTCN1 (ENSSSCG00000006731) #32	MAN1A2 (ENSSSCG00000006730) #33	TENT5C (ENSSSCG00000006729) #34	ENSSSCG00000040549	GDAP2 (ENSSSCG00000006728) #35
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Cetacea	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00950000183109.c.a.a.n	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Odontoceti	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00950000183109.c.a.a.n	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000153503.a.b.w.b	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00950000183109.c.a.a.m.b	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000153503.a.b.w.b	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00950000183109.c.a.a.m.b.c	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Beluga whale	MODERN SPECIES	74	ENSDLEG00000016183	DENND2C (ENSDLEG00000016190)	AMPD1 (ENSDLEG00000016228)	NRAS (ENSDLEG00000016286)	CSDE1 (ENSDLEG00000016299)	SIKE1 (ENSDLEG00000016348)	ENSDLEG00000016361	SYCP1 (ENSDLEG00000016413)	TSHB (ENSDLEG00000016555)	TSPAN2 (ENSDLEG00000016564)	NGF (ENSDLEG00000016573)	VANGL1 (ENSDLEG00000016587) #18	CASQ2 (ENSDLEG00000016613) #19	NHLH2 (ENSDLEG00000016681) #20	SLC22A15 (ENSDLEG00000016683) #21	MAB21L3 (ENSDLEG00000016704) #22	ATP1A1 (ENSDLEG00000016719) #23	CD58 (ENSDLEG00000016764) #25	IGSF3 (ENSDLEG00000016776) #26	CD2 (ENSDLEG00000016800) #27	ENSDLEG00000016812	PTGFRN (ENSDLEG00000016825) #28	CD101 (ENSDLEG00000016843) #29	ENSDLEG00000016876	TTF2 (ENSDLEG00000016896)	TRIM45 (ENSDLEG00000016923) #31	MAN1A2 (ENSDLEG00000007933) #33	FAM46C (ENSDLEG00000007955) #34	GDAP2 (ENSDLEG00000007964) #35	WDR3 (ENSDLEG00000007988) #36	SPAG17 (ENSDLEG00000008058) #37
Narwhal	MODERN SPECIES	304	BCAS2 (ENSMMNG00015015561)	DENND2C (ENSMMNG00015015542)	AMPD1 (ENSMMNG00015015503)	NRAS (ENSMMNG00015015474)	CSDE1 (ENSMMNG00015015367)	SIKE1 (ENSMMNG00015015257)	ENSMMNG00015004059	SYCP1 (ENSMMNG00015003966)	TSHB (ENSMMNG00015003906)	TSPAN2 (ENSMMNG00015003882)	NGF (ENSMMNG00015003864)	VANGL1 (ENSMMNG00015003837) #18	CASQ2 (ENSMMNG00015003803) #19	NHLH2 (ENSMMNG00015003773) #20	SLC22A15 (ENSMMNG00015003758) #21	MAB21L3 (ENSMMNG00015003735) #22	ATP1A1 (ENSMMNG00015003636) #23	ENSMMNG00015003565 #25	IGSF3 (ENSMMNG00015003523) #26	CD2 (ENSMMNG00015003495) #27	ENSMMNG00015003481	ENSMMNG00015003468	PTGFRN (ENSMMNG00015003441) #28	CD101 (ENSMMNG00015003430) #29	ENSMMNG00015003412	TTF2 (ENSMMNG00015003336)	TRIM45 (ENSMMNG00015003284) #31	VTCN1 (ENSMMNG00015003230) #32	MAN1A2 (ENSMMNG00015003175) #33	TENT5C (ENSMMNG00015003165) #34	GDAP2 (ENSMMNG00015003116) #35
Vaquita	MODERN SPECIES		AMPD1 (ENSPSNG00000002369)	NRAS (ENSPSNG00000002442)	CSDE1 (ENSPSNG00000002494)	SIKE1 (ENSPSNG00000002576)	ENSPSNG00000002610	SYCP1 (ENSPSNG00000002726)	TSHB (ENSPSNG00000002854)	TSPAN2 (ENSPSNG00000002875)	ENSPSNG00000002914	NGF (ENSPSNG00000002934)	VANGL1 (ENSPSNG00000002964) #18	CASQ2 (ENSPSNG00000002987) #19	NHLH2 (ENSPSNG00000003008) #20	ENSPSNG00000003023	SLC22A15 (ENSPSNG00000003035) #21	MAB21L3 (ENSPSNG00000003053) #22	ATP1A1 (ENSPSNG00000003098) #23	ENSPSNG00000003168 #25	IGSF3 (ENSPSNG00000003204) #26	CD2 (ENSPSNG00000003248) #27	ENSPSNG00000003272	ENSPSNG00000003280	ENSPSNG00000003294	PTGFRN (ENSPSNG00000003312) #28	CD101 (ENSPSNG00000003355) #29	ENSPSNG00000003381	TTF2 (ENSPSNG00000003422)	TRIM45 (ENSPSNG00000003461) #31	VTCN1 (ENSPSNG00000003497) #32	MAN1A2 (ENSPSNG00000003561) #33	TENT5C (ENSPSNG00000003573) #34
Dolphin	MODERN SPECIES	6799															SLC22A15 (ENSTTRG00000002441) #21	MAB21L3 (ENSTTRG00000002442) #22
Sperm whale	MODERN SPECIES	948																MAB21L3 (ENSPCTG00005022071) #22
Blue whale	MODERN SPECIES		BCAS2 (ENSBMSG00010009881)	DENND2C (ENSBMSG00010009901)	AMPD1 (ENSBMSG00010009959)	NRAS (ENSBMSG00010000036)	CSDE1 (ENSBMSG00010000067)	SIKE1 (ENSBMSG00010000128)	ENSBMSG00010000161	SYCP1 (ENSBMSG00010000313)	TSHB (ENSBMSG00010000462)	TSPAN2 (ENSBMSG00010000486)	NGF (ENSBMSG00010000509)	VANGL1 (ENSBMSG00010000530) #18	CASQ2 (ENSBMSG00010000556) #19	NHLH2 (ENSBMSG00010000584) #20	SLC22A15 (ENSBMSG00010000600) #21	MAB21L3 (ENSBMSG00010000624) #22	ATP1A1 (ENSBMSG00010000656) #23	CD58 (ENSBMSG00010000750) #25	IGSF3 (ENSBMSG00010000848) #26	CD2 (ENSBMSG00010000892) #27	PTGFRN (ENSBMSG00010000912) #28	CD101 (ENSBMSG00010000941) #29	ENSBMSG00010000968	TTF2 (ENSBMSG00010000984)	TRIM45 (ENSBMSG00010001017) #31	VTCN1 (ENSBMSG00010001035) #32	MAN1A2 (ENSBMSG00010001075) #33	TENT5C (ENSBMSG00010001103) #34	ENSBMSG00010001110	GDAP2 (ENSBMSG00010001124) #35	WDR3 (ENSBMSG00010001140) #36
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000156361.B	ENSGT00390000014494.qb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Percora_a	ANCESTRAL SPECIES	1	ENSGT00390000014494.qb	ENSGT00390000014494.pb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Bovidae	ANCESTRAL SPECIES	1	ENSGT00390000014494.qb	ENSGT00390000014494.pb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000153311.a.b.a.i.b.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000155337.g.a	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020021275	DENND2C (ENSOARG00020021315)	AMPD1 (ENSOARG00020021414)	NRAS (ENSOARG00020021627)	CSDE1 (ENSOARG00020021728)	SIKE1 (ENSOARG00020022151)	SYCP1 (ENSOARG00020022243)	TSHB (ENSOARG00020022677)	TSPAN2 (ENSOARG00020022702)	NGF (ENSOARG00020022760)	VANGL1 (ENSOARG00020022787) #18	CASQ2 (ENSOARG00020022877) #19	NHLH2 (ENSOARG00020022935) #20	ENSOARG00020000086	SLC22A15 (ENSOARG00020000158) #21	MAB21L3 (ENSOARG00020000215) #22	ENSOARG00020000242	ATP1A1 (ENSOARG00020000332) #23	ENSOARG00020000728 #25	ENSOARG00020000743	IGSF3 (ENSOARG00020000764) #26	CD2 (ENSOARG00020000791) #27	PTGFRN (ENSOARG00020000811) #28	TTF2 (ENSOARG00020000877)	TRIM45 (ENSOARG00020001002) #31	VTCN1 (ENSOARG00020001040) #32	MAN1A2 (ENSOARG00020001101) #33	TENT5C (ENSOARG00020001120) #34	GDAP2 (ENSOARG00020001139) #35	WDR3 (ENSOARG00020001170) #36	ENSOARG00020001200
Goat	MODERN SPECIES	22	DENND2C (ENSCHIG00000022818)	AMPD1 (ENSCHIG00000015980)	NRAS (ENSCHIG00000023175)	CSDE1 (ENSCHIG00000017250)	SIKE1 (ENSCHIG00000014644)	SYCP1 (ENSCHIG00000019909)	TSHB (ENSCHIG00000007505)	TSPAN2 (ENSCHIG00000007588)	NGF (ENSCHIG00000007731)	VANGL1 (ENSCHIG00000011522) #18	CASQ2 (ENSCHIG00000014376) #19	ENSCHIG00000017520	NHLH2 (ENSCHIG00000007315) #20	ENSCHIG00000008508	SLC22A15 (ENSCHIG00000022810) #21	MAB21L3 (ENSCHIG00000019025) #22	ENSCHIG00000005925	ATP1A1 (ENSCHIG00000017191) #23	ENSCHIG00000022779 #25	IGSF3 (ENSCHIG00000003902) #26	CD2 (ENSCHIG00000023355) #27	PTGFRN (ENSCHIG00000017906) #28	CD101 (ENSCHIG00000025123) #29	TTF2 (ENSCHIG00000020785)	TRIM45 (ENSCHIG00000018385) #31	ENSCHIG00000007372	VTCN1 (ENSCHIG00000019630) #32	MAN1A2 (ENSCHIG00000013056) #33	TENT5C (ENSCHIG00000005579) #34	GDAP2 (ENSCHIG00000019563) #35	WDR3 (ENSCHIG00000010490) #36
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950.g	ENSGT00390000016950.h	ENSGT00390000018003.a	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Bos	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950.g	ENSGT00390000016950.h	ENSGT00390000018003.a	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Bos_b	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950.g	ENSGT00390000018003.a	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000154175.i.b.l.b	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693.a #37
Cow	MODERN SPECIES	22	DENND2C (ENSBTAG00000012194)	AMPD1 (ENSBTAG00000011548)	NRAS (ENSBTAG00000046797)	CSDE1 (ENSBTAG00000000678)	SIKE1 (ENSBTAG00000015977)	ENSBTAG00000032057	SYCP1 (ENSBTAG00000032071)	TSHB (ENSBTAG00000006295)	TSPAN2 (ENSBTAG00000015961)	NGF (ENSBTAG00000007446)	VANGL1 (ENSBTAG00000005788) #18	CASQ2 (ENSBTAG00000011500) #19	NHLH2 (ENSBTAG00000015067) #20	ENSBTAG00000051199	SLC22A15 (ENSBTAG00000000664) #21	MAB21L3 (ENSBTAG00000001406) #22	ENSBTAG00000050694	ATP1A1 (ENSBTAG00000001246) #23	CD58 (ENSBTAG00000040131) #25	IGSF3 (ENSBTAG00000004849) #26	CD2 (ENSBTAG00000017256) #27	PTGFRN (ENSBTAG00000008022) #28	CD101 (ENSBTAG00000018203) #29	TTF2 (ENSBTAG00000015392)	TRIM45 (ENSBTAG00000001748) #31	VTCN1 (ENSBTAG00000014466) #32	MAN1A2 (ENSBTAG00000003586) #33	TENT5C (ENSBTAG00000046509) #34	ENSBTAG00000051931	GDAP2 (ENSBTAG00000016387) #35	WDR3 (ENSBTAG00000019937) #36
Hybrid Bos Indicus	MODERN SPECIES	22	AMPD1 (ENSBIXG00005019165)	NRAS (ENSBIXG00005019184)	CSDE1 (ENSBIXG00005002632)	SIKE1 (ENSBIXG00005020065)	ENSBIXG00005020069	SYCP1 (ENSBIXG00005003311)	TSHB (ENSBIXG00005020177)	TSPAN2 (ENSBIXG00005003349)	NGF (ENSBIXG00005020234)	ENSBIXG00005005532	VANGL1 (ENSBIXG00005020258) #18	CASQ2 (ENSBIXG00005020297) #19	NHLH2 (ENSBIXG00005020316) #20	ENSBIXG00005020331	SLC22A15 (ENSBIXG00005020361) #21	MAB21L3 (ENSBIXG00005003444) #22	ENSBIXG00005020442	ATP1A1 (ENSBIXG00005020549) #23	ENSBIXG00005003478	ENSBIXG00005020612 #25	IGSF3 (ENSBIXG00005003497) #26	CD2 (ENSBIXG00005020730) #27	PTGFRN (ENSBIXG00005020799) #28	CD101 (ENSBIXG00005005743) #29	TTF2 (ENSBIXG00005020946)	TRIM45 (ENSBIXG00005006265) #31	VTCN1 (ENSBIXG00005003569) #32	ENSBIXG00005021170	MAN1A2 (ENSBIXG00005021491) #33	GDAP2 (ENSBIXG00005007307) #35	WDR3 (ENSBIXG00005003644) #36
Bos_a	ANCESTRAL SPECIES	32	ENSGT00390000014494.qb	ENSGT00940000153311.a.b.a.i.b.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950.h	ENSGT00390000018003.a	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Domestic yak	MODERN SPECIES	22	NRAS (ENSBGRG00000006784)	ENSBGRG00000006823	SIKE1 (ENSBGRG00000006884)	ENSBGRG00000006936	SYCP1 (ENSBGRG00000006966)	TSHB (ENSBGRG00000007103)	ENSBGRG00000007154	TSPAN2 (ENSBGRG00000007175)	NGF (ENSBGRG00000007446)	ENSBGRG00000007514	VANGL1 (ENSBGRG00000007582) #18	CASQ2 (ENSBGRG00000007757) #19	NHLH2 (ENSBGRG00000007908) #20	SLC22A15 (ENSBGRG00000007927) #21	ENSBGRG00000008009	MAB21L3 (ENSBGRG00000008095) #22	ENSBGRG00000008185	ATP1A1 (ENSBGRG00000008222) #23	ENSBGRG00000008748 #25	IGSF3 (ENSBGRG00000008798) #26	ENSBGRG00000008897	ENSBGRG00000008942 #27	PTGFRN (ENSBGRG00000009035) #28	CD101 (ENSBGRG00000009173) #29	TTF2 (ENSBGRG00000009266)	TRIM45 (ENSBGRG00000009569) #31	VTCN1 (ENSBGRG00000009691) #32	MAN1A2 (ENSBGRG00000009916) #33	ENSBGRG00000010295	TENT5C (ENSBGRG00000010319) #34	GDAP2 (ENSBGRG00000010327) #35
Wild yak	MODERN SPECIES	2575															ENSBMUG00000026862 #21	MAB21L3 (ENSBMUG00000026860) #22
American bison	MODERN SPECIES	3366	ENSBBBG00000007246	DENND2C (ENSBBBG00000002113)	AMPD1 (ENSBBBG00000011610)	NRAS (ENSBBBG00000011637)	ENSBBBG00000011846	SIKE1 (ENSBBBG00000011890)	ENSBBBG00000011898	SYCP1 (ENSBBBG00000012065)	TSHB (ENSBBBG00000012103)	TSPAN2 (ENSBBBG00000012145)	NGF (ENSBBBG00000012158)	VANGL1 (ENSBBBG00000012189) #18	CASQ2 (ENSBBBG00000012205) #19	ENSBBBG00000012213	SLC22A15 (ENSBBBG00000012276) #21	MAB21L3 (ENSBBBG00000002319) #22	ATP1A1 (ENSBBBG00000012376) #23	ENSBBBG00000012393 #25	IGSF3 (ENSBBBG00000012453) #26	CD2 (ENSBBBG00000012471) #27	PTGFRN (ENSBBBG00000002392) #28	CD101 (ENSBBBG00000012530) #29	TTF2 (ENSBBBG00000012568)	TRIM45 (ENSBBBG00000012597) #31	VTCN1 (ENSBBBG00000002434) #32	MAN1A2 (ENSBBBG00000012766) #33	TENT5C (ENSBBBG00000007449) #34	GDAP2 (ENSBBBG00000002478) #35	WDR3 (ENSBBBG00000012825) #36	SPAG17 (ENSBBBG00000001749) #37	ENSBBBG00000012856
Siberian musk deer	MODERN SPECIES	98	BCAS2 (ENSMMSG00000011440)	ENSMMSG00000011497	DENND2C (ENSMMSG00000011535)	AMPD1 (ENSMMSG00000011611)	NRAS (ENSMMSG00000011786)	CSDE1 (ENSMMSG00000011841)	SIKE1 (ENSMMSG00000012115)	SYCP1 (ENSMMSG00000012181)	TSHB (ENSMMSG00000012517)	TSPAN2 (ENSMMSG00000012545)	NGF (ENSMMSG00000012583)	VANGL1 (ENSMMSG00000012598) #18	CASQ2 (ENSMMSG00000012652) #19	NHLH2 (ENSMMSG00000012682) #20	SLC22A15 (ENSMMSG00000012704) #21	MAB21L3 (ENSMMSG00000012783) #22	ATP1A1 (ENSMMSG00000012825) #23	ENSMMSG00000012961 #25	IGSF3 (ENSMMSG00000012976) #26	ENSMMSG00000013017	PTGFRN (ENSMMSG00000013024) #28	CD101 (ENSMMSG00000013054) #29	TTF2 (ENSMMSG00000013101)	TRIM45 (ENSMMSG00000013142) #31	VTCN1 (ENSMMSG00000013168) #32	MAN1A2 (ENSMMSG00000013222) #33	ENSMMSG00000013271	TENT5C (ENSMMSG00000013288) #34	GDAP2 (ENSMMSG00000013305) #35	WDR3 (ENSMMSG00000013356) #36	SPAG17 (ENSMMSG00000013419) #37
Yarkand deer	MODERN SPECIES	12	DENND2C (ENSCHYG00000017309)	AMPD1 (ENSCHYG00000016598)	NRAS (ENSCHYG00000016503)	CSDE1 (ENSCHYG00000016050)	SIKE1 (ENSCHYG00000015766)	ENSCHYG00000015651	SYCP1 (ENSCHYG00000015396)	TSHB (ENSCHYG00000015320)	TSPAN2 (ENSCHYG00000015066)	NGF (ENSCHYG00000014981)	VANGL1 (ENSCHYG00000014894) #18	CASQ2 (ENSCHYG00000014814) #19	NHLH2 (ENSCHYG00000014773) #20	ENSCHYG00000014737	ENSCHYG00000014605 #21	MAB21L3 (ENSCHYG00000014551) #22	ATP1A1 (ENSCHYG00000013765) #23	ENSCHYG00000013650 #25	IGSF3 (ENSCHYG00000013489) #26	CD2 (ENSCHYG00000013421) #27	PTGFRN (ENSCHYG00000013321) #28	CD101 (ENSCHYG00000013230) #29	TTF2 (ENSCHYG00000013086)	TRIM45 (ENSCHYG00000013005) #31	VTCN1 (ENSCHYG00000012876) #32	ENSCHYG00000012828	MAN1A2 (ENSCHYG00000012603) #33	TENT5C (ENSCHYG00000012566) #34	GDAP2 (ENSCHYG00000012378) #35	WDR3 (ENSCHYG00000012236) #36	SPAG17 (ENSCHYG00000012111) #37
Camelidae	ANCESTRAL SPECIES	29	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
Arabian camel	MODERN SPECIES	35	TRIM33 (ENSCDRG00005005176)	BCAS2 (ENSCDRG00005005135)	DENND2C (ENSCDRG00005005062)	AMPD1 (ENSCDRG00005004958)	NRAS (ENSCDRG00005004935)	ENSCDRG00005004604	SIKE1 (ENSCDRG00005004534)	ENSCDRG00005004390	SYCP1 (ENSCDRG00005003944)	TSHB (ENSCDRG00005003878)	TSPAN2 (ENSCDRG00005003772)	NGF (ENSCDRG00005003718)	VANGL1 (ENSCDRG00005003686) #18	CASQ2 (ENSCDRG00005003648) #19	SLC22A15 (ENSCDRG00005003542) #21	MAB21L3 (ENSCDRG00005003501) #22	ATP1A1 (ENSCDRG00005003442) #23	ENSCDRG00005003393 #25	IGSF3 (ENSCDRG00005003359) #26	CD2 (ENSCDRG00005003335) #27	PTGFRN (ENSCDRG00005003307) #28	CD101 (ENSCDRG00005003285) #29	ENSCDRG00005003266 #30	TRIM45 (ENSCDRG00005003250) #31	VTCN1 (ENSCDRG00005003199) #32	MAN1A2 (ENSCDRG00005003168) #33	TENT5C (ENSCDRG00005003158) #34	GDAP2 (ENSCDRG00005003149) #35	WDR3 (ENSCDRG00005003128) #36	SPAG17 (ENSCDRG00005003031) #37	ENSCDRG00005003000
Alpaca	MODERN SPECIES	4340															SLC22A15 (ENSVPAG00000003745) #21	MAB21L3 (ENSVPAG00000003748) #22
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a.j
Carnivora	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT01100000263543.a.j
Caniformia	ANCESTRAL SPECIES	2	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00950000185047	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00950000185829	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00950000185047	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00950000185829	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Ursidae	ANCESTRAL SPECIES	32	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00950000185047	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00950000185829	ENSGT00940000156336 #35	ENSGT00940000153859.a #36
Ursus	ANCESTRAL SPECIES	107	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.b	ENSGT00390000016950.k.a	ENSGT00390000016950.l	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00950000185047	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37
American black bear	MODERN SPECIES	356												VANGL1 (ENSUAMG00000022013) #18	CASQ2 (ENSUAMG00000022012) #19	NHLH2 (ENSUAMG00000022011) #20	SLC22A15 (ENSUAMG00000022009) #21	MAB21L3 (ENSUAMG00000022007) #22
Polar bear	MODERN SPECIES	209	DENND2C (ENSUMAG00000011794)	AMPD1 (ENSUMAG00000011730)	NRAS (ENSUMAG00000011722)	ENSUMAG00000011714	ENSUMAG00000011713	SIKE1 (ENSUMAG00000011701)	ENSUMAG00000011697	ENSUMAG00000011659	SYCP1 (ENSUMAG00000011531)	TSHB (ENSUMAG00000011510)	TSPAN2 (ENSUMAG00000011490)	NGF (ENSUMAG00000011483)	VANGL1 (ENSUMAG00000011478) #18	CASQ2 (ENSUMAG00000011472) #19	SLC22A15 (ENSUMAG00000011378) #21	MAB21L3 (ENSUMAG00000011357) #22	ATP1A1 (ENSUMAG00000011338) #23	ENSUMAG00000011330 #25
Giant Panda	MODERN SPECIES	11	AMPD1 (ENSAMEG00000017140)	ENSAMEG00000028734	NRAS (ENSAMEG00000017134)	CSDE1 (ENSAMEG00000017129)	SIKE1 (ENSAMEG00000017123)	ENSAMEG00000026022	ENSAMEG00000017106	SYCP1 (ENSAMEG00000017087)	TSHB (ENSAMEG00000010929)	ENSAMEG00000010910	NGF (ENSAMEG00000030308)	VANGL1 (ENSAMEG00000010898) #18	CASQ2 (ENSAMEG00000029848) #19	NHLH2 (ENSAMEG00000010851) #20	SLC22A15 (ENSAMEG00000026074) #21	MAB21L3 (ENSAMEG00000005068) #22	ATP1A1 (ENSAMEG00000005071) #23	ENSAMEG00000005165 #25	IGSF3 (ENSAMEG00000005171) #26	ENSAMEG00000005177	PTGFRN (ENSAMEG00000005188) #28	CD101 (ENSAMEG00000005212) #29	ENSAMEG00000005220 #30	TRIM45 (ENSAMEG00000005240) #31	VTCN1 (ENSAMEG00000005256) #32	ENSAMEG00000029843	MAN1A2 (ENSAMEG00000004421) #33	TENT5C (ENSAMEG00000019061) #34	ENSAMEG00000024849	GDAP2 (ENSAMEG00000004394) #35	WDR3 (ENSAMEG00000004339) #36
Mustelinae	ANCESTRAL SPECIES	47	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Ferret	MODERN SPECIES	323			ENSMPUG00000001750	ENSMPUG00000001742	ENSMPUG00000001740	ENSMPUG00000001725	TSHB (ENSMPUG00000001722)	TSPAN2 (ENSMPUG00000001674)	NGF (ENSMPUG00000019389)	VANGL1 (ENSMPUG00000001670) #18	CASQ2 (ENSMPUG00000001664) #19	NHLH2 (ENSMPUG00000019387) #20	ENSMPUG00000001661	SLC22A15 (ENSMPUG00000001657) #21	ENSMPUG00000001652	MAB21L3 (ENSMPUG00000001644) #22	ATP1A1 (ENSMPUG00000001638) #23	ENSMPUG00000001632 #25	IGSF3 (ENSMPUG00000001629) #26	CD2 (ENSMPUG00000001627) #27	PTGFRN (ENSMPUG00000001624) #28	CD101 (ENSMPUG00000001621) #29	ENSMPUG00000001606	TRIM45 (ENSMPUG00000001600) #31	VTCN1 (ENSMPUG00000001593) #32	MAN1A2 (ENSMPUG00000001585) #33	TENT5C (ENSMPUG00000001581) #34	GDAP2 (ENSMPUG00000001575) #35	WDR3 (ENSMPUG00000001565) #36	SPAG17 (ENSMPUG00000001553) #37	TBX15 (ENSMPUG00000001549)
American mink	MODERN SPECIES	111	NAA60 (ENSNVIG00000023370)	C16orf90 (ENSNVIG00000023393)	CLUAP1 (ENSNVIG00000023394)	NLRC3 (ENSNVIG00000023403)	SLX4 (ENSNVIG00000023409)	TRAP1 (ENSNVIG00000023431)	DNASE1 (ENSNVIG00000023448)	CREBBP (ENSNVIG00000023450)	ADCY9 (ENSNVIG00000023463)	SRL (ENSNVIG00000023467)	TFAP4 (ENSNVIG00000023470)	VANGL1 (ENSNVIG00000023481) #18	CASQ2 (ENSNVIG00000000050) #19	NHLH2 (ENSNVIG00000000105) #20	SLC22A15 (ENSNVIG00000000113) #21	MAB21L3 (ENSNVIG00000000128) #22	ATP1A1 (ENSNVIG00000000157) #23	ENSNVIG00000000193 #25	IGSF3 (ENSNVIG00000000200) #26	CD2 (ENSNVIG00000000214) #27	PTGFRN (ENSNVIG00000000230) #28	CD101 (ENSNVIG00000000251) #29	TTF2 (ENSNVIG00000000301)	TRI45 (ENSNVIG00000000318) #31	VTCN1 (ENSNVIG00000000327) #32	ENSNVIG00000000362	MAN1A2 (ENSNVIG00000000375) #33	TENT5C (ENSNVIG00000000384) #34
Canidae	ANCESTRAL SPECIES	25	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.a	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00390000013931.a.a.a.a	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00950000185047.a.a	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00950000185829	ENSGT00940000156336 #35
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00950000183011.c.a.a	ENSGT00940000158947.g.a	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00950000182967.a.a.a.a.a.a.c.b.a.a ##24	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00390000013931.a.a.a.a.b	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000169805	ENSGT00940000154334.k #31	ENSGT00950000183010.a.a.a.b.a.a.a.a.a	ENSGT00940000157300 #32	ENSGT00950000185047.a.a	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00950000185829
Dog	MODERN SPECIES	8	CSDE1 (ENSCAFG00845026694)	SIKE1 (ENSCAFG00845027120)	ENSCAFG00845027157	ENSCAFG00845027184 ##24	ENSCAFG00845027218	ENSCAFG00845027397	ENSCAFG00845027680	TSHB (ENSCAFG00845027709)	TSPAN2 (ENSCAFG00845027766)	ENSCAFG00845027829	NGF (ENSCAFG00845027859)	VANGL1 (ENSCAFG00845027910) #18	CASQ2 (ENSCAFG00845028062) #19	ENSCAFG00845028114 #20	SLC22A15 (ENSCAFG00845028198) #21	MAB21L3 (ENSCAFG00845028265) #22	ENSCAFG00845028320	ATP1A1 (ENSCAFG00845028456) #23	ENSCAFG00845028795 #25	IGSF3 (ENSCAFG00845028936) #26	CD2 (ENSCAFG00845028984) #27	PTGFRN (ENSCAFG00845029002) #28	CD101 (ENSCAFG00845029071) #29	ENSCAFG00845029143	TRIM45 (ENSCAFG00845029248) #31	ENSCAFG00845029291	VTCN1 (ENSCAFG00845029358) #32	ENSCAFG00845029463	MAN1A2 (ENSCAFG00845029509) #33	TENT5C (ENSCAFG00845005783) #34	GDAP2 (ENSCAFG00845005877) #35
Dingo	MODERN SPECIES	223	NRAS (ENSCAFG00020000486)	CSDE1 (ENSCAFG00020000481)	SIKE1 (ENSCAFG00020000472)	ENSCAFG00020000466	ENSCAFG00020000446 ##24	ENSCAFG00020000163	ENSCAFG00020021008	SYCP1 (ENSCAFG00020020995)	TSHB (ENSCAFG00020020987)	TSPAN2 (ENSCAFG00020020982)	NGF (ENSCAFG00020020970)	VANGL1 (ENSCAFG00020020963) #18	CASQ2 (ENSCAFG00020020924) #19	NHLH2 (ENSCAFG00020020915) #20	SLC22A15 (ENSCAFG00020020878) #21	MAB21L3 (ENSCAFG00020020870) #22	ATP1A1 (ENSCAFG00020020858) #23	ENSCAFG00020020844 #25	IGSF3 (ENSCAFG00020020808) #26	CD2 (ENSCAFG00020020793) #27	ENSCAFG00020020788	PTGFRN (ENSCAFG00020020784) #28	CD101 (ENSCAFG00020020782) #29	ENSCAFG00020020772	TRIM45 (ENSCAFG00020020769) #31	ENSCAFG00020020767	VTCN1 (ENSCAFG00020020764) #32	ENSCAFG00020020761	MAN1A2 (ENSCAFG00020020664) #33	TENT5C (ENSCAFG00020020652) #34	ENSCAFG00020020651
Red fox	MODERN SPECIES	16	SIKE1 (ENSVVUG00000009899)	ENSVVUG00000009905	ENSVVUG00000009910	ENSVVUG00000009922	SYCP1 (ENSVVUG00000009950)	ENSVVUG00000010223	ENSVVUG00000010227	TSHB (ENSVVUG00000010234)	TSPAN2 (ENSVVUG00000010237)	VANGL1 (ENSVVUG00000010259) #18	CASQ2 (ENSVVUG00000010295) #19	NHLH2 (ENSVVUG00000010299) #20	ENSVVUG00000010302 #21	ENSVVUG00000010311	ENSVVUG00000010324 #21	MAB21L3 (ENSVVUG00000010333) #22	ENSVVUG00000010336	ATP1A1 (ENSVVUG00000010340) #23	CD58 (ENSVVUG00000010356) #25	IGSF3 (ENSVVUG00000010362) #26	CD2 (ENSVVUG00000010381) #27	PTGFRN (ENSVVUG00000010390) #28	CD101 (ENSVVUG00000010401) #29	TTF2 (ENSVVUG00000010407) #30	TRIM45 (ENSVVUG00000010421) #31	VTCN1 (ENSVVUG00000010432) #32	ENSVVUG00000010433	MAN1A2 (ENSVVUG00000010442) #33	TENT5C (ENSVVUG00000010460) #34	ENSVVUG00000010463	GDAP2 (ENSVVUG00000010473) #35
Felidae	ANCESTRAL SPECIES	10	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.e	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Panthera	ANCESTRAL SPECIES	4	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.e	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00950000183011.c.a.a	ENSGT00940000158947.e	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000154158.l.c.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00950000183010.a.a.a.b.a.a.b.a.b.b.a	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000164746 #30	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
leopard	MODERN SPECIES	31	AMPD1 (ENSPPRG00000008277)	ENSPPRG00000007102	CSDE1 (ENSPPRG00000006747)	SIKE1 (ENSPPRG00000001473)	ENSPPRG00000001280	ENSPPRG00000000888	SYCP1 (ENSPPRG00000023786)	TSHB (ENSPPRG00000012835)	TSPAN2 (ENSPPRG00000012267)	ENSPPRG00000016776	NGF (ENSPPRG00000016689)	VANGL1 (ENSPPRG00000010871) #18	CASQ2 (ENSPPRG00000009697) #19	NHLH2 (ENSPPRG00000016591) #20	SLC22A15 (ENSPPRG00000008983) #21	MAB21L3 (ENSPPRG00000008518) #22	ATP1A1 (ENSPPRG00000008177) #23	IGSF3 (ENSPPRG00000004364) #26	CD2 (ENSPPRG00000003530) #27	PTGFRN (ENSPPRG00000003305) #28	CD101 (ENSPPRG00000003135) #29	ENSPPRG00000002352 #30	TRIM45 (ENSPPRG00000001987) #31	VTCN1 (ENSPPRG00000001120) #32	MAN1A2 (ENSPPRG00000000605) #33	TENT5C (ENSPPRG00000016270) #34	GDAP2 (ENSPPRG00000000210) #35	WDR3 (ENSPPRG00000022972) #36	SPAG17 (ENSPPRG00000023948) #37	TBX15 (ENSPPRG00000020309)	WARS2 (ENSPPRG00000017754)
lion	MODERN SPECIES	8	AMPD1 (ENSPLOG00000016449)	NRAS (ENSPLOG00000016315)	CSDE1 (ENSPLOG00000015680)	SIKE1 (ENSPLOG00000015473)	ENSPLOG00000015461	ENSPLOG00000015234	SYCP1 (ENSPLOG00000014657)	TSHB (ENSPLOG00000014568)	TSPAN2 (ENSPLOG00000014519)	ENSPLOG00000014415	NGF (ENSPLOG00000014389)	VANGL1 (ENSPLOG00000014377) #18	CASQ2 (ENSPLOG00000014262) #19	NHLH2 (ENSPLOG00000014240) #20	SLC22A15 (ENSPLOG00000014089) #21	MAB21L3 (ENSPLOG00000014017) #22	ATP1A1 (ENSPLOG00000013723) #23	ENSPLOG00000013611 #25	IGSF3 (ENSPLOG00000013549) #26	CD2 (ENSPLOG00000013510) #27	PTGFRN (ENSPLOG00000013463) #28	CD101 (ENSPLOG00000013429) #29	ENSPLOG00000013203 #30	TRIM45 (ENSPLOG00000013060) #31	VTCN1 (ENSPLOG00000012889) #32	MAN1A2 (ENSPLOG00000012755) #33	TENT5C (ENSPLOG00000012735) #34	ENSPLOG00000012701	GDAP2 (ENSPLOG00000012658) #35	WDR3 (ENSPLOG00000012483) #36	SPAG17 (ENSPLOG00000012093) #37
Tiger	MODERN SPECIES	20													VANGL1 (ENSPTIG00000015471) #18	CASQ2 (ENSPTIG00000014576) #19	SLC22A15 (ENSPTIG00000013213) #21	MAB21L3 (ENSPTIG00000011945) #22	ATP1A1 (ENSPTIG00000020868) #23	IGSF3 (ENSPTIG00000018398) #26	SDK2 (ENSPTIG00000015074)	CPSF4L (ENSPTIG00000012676)	C17orf80 (ENSPTIG00000008684)	ENSPTIG00000006569	COG1 (ENSPTIG00000005027)	SSTR2 (ENSPTIG00000006667)	SLC39A11 (ENSPTIG00000000090)	ENSPTIG00000006657	ENSPTIG00000019658	KCNJ2 (ENSPTIG00000006640)	KCNJ16 (ENSPTIG00000006633)	MAP2K6 (ENSPTIG00000017793)	ABCA5 (ENSPTIG00000016901)
Cat	MODERN SPECIES	239	DENND2C (ENSFCAG00000010508)	AMPD1 (ENSFCAG00000010509)	NRAS (ENSFCAG00000037994)	CSDE1 (ENSFCAG00000029266)	SIKE1 (ENSFCAG00000031592)	ENSFCAG00000041311	ENSFCAG00000028538	SYCP1 (ENSFCAG00000023028)	TSHB (ENSFCAG00000010405)	TSPAN2 (ENSFCAG00000029385)	NGF (ENSFCAG00000045820)	VANGL1 (ENSFCAG00000010493) #18	CASQ2 (ENSFCAG00000025977) #19	NHLH2 (ENSFCAG00000028313) #20	SLC22A15 (ENSFCAG00000022423) #21	MAB21L3 (ENSFCAG00000031670) #22	ATP1A1 (ENSFCAG00000013378) #23	CD58 (ENSFCAG00000025590) #25	IGSF3 (ENSFCAG00000011343) #26	CD2 (ENSFCAG00000001976) #27	PTGFRN (ENSFCAG00000001977) #28	ENSFCAG00000051359	CD101 (ENSFCAG00000001979) #29	TTF2 (ENSFCAG00000001981)	TRIM45 (ENSFCAG00000005204) #31	VTCN1 (ENSFCAG00000009689) #32	MAN1A2 (ENSFCAG00000019000) #33	TENT5C (ENSFCAG00000022444) #34	GDAP2 (ENSFCAG00000003468) #35	WDR3 (ENSFCAG00000003469) #36	ENSFCAG00000011531 #37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00390000014494.ob	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Chiroptera	ANCESTRAL SPECIES	38	ENSGT00390000014494.ob	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Microchiroptera	ANCESTRAL SPECIES	35	ENSGT00390000014494.ob	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Greater horseshoe bat	MODERN SPECIES	14	ENSRFEG00010015679	DENND2C (ENSRFEG00010015796)	AMPD1 (ENSRFEG00010015922)	NRAS (ENSRFEG00010015972)	CSDE1 (ENSRFEG00010016045)	SIKE1 (ENSRFEG00010016146)	ENSRFEG00010016255	SYCP1 (ENSRFEG00010016297)	TSHB (ENSRFEG00010017176)	TSPAN2 (ENSRFEG00010017235)	NGF (ENSRFEG00010017324)	VANGL1 (ENSRFEG00010017347) #18	CASQ2 (ENSRFEG00010017384) #19	NHLH2 (ENSRFEG00010017414) #20	SLC22A15 (ENSRFEG00010017434) #21	MAB21L3 (ENSRFEG00010017519) #22	ATP1A1 (ENSRFEG00010017578) #23	ENSRFEG00010017926 #25	IGSF3 (ENSRFEG00010017979) #26	CD2 (ENSRFEG00010018050) #27	PTGFRN (ENSRFEG00010018081) #28	CD101 (ENSRFEG00010018120) #29	ENSRFEG00010018150	ENSRFEG00010018175 #30	TRIM45 (ENSRFEG00010018200) #31	VTCN1 (ENSRFEG00010018302) #32	MAN1A2 (ENSRFEG00010018506) #33	TENT5C (ENSRFEG00010018543) #34	GDAP2 (ENSRFEG00010018562) #35	WDR3 (ENSRFEG00010018610) #36	SPAG17 (ENSRFEG00010018691) #37
Microbat	MODERN SPECIES	1847																MAB21L3 (ENSMLUG00000013451) #22
Megabat	MODERN SPECIES	1801															SLC22A15 (ENSPVAG00000000035) #21	MAB21L3 (ENSPVAG00000000038) #22
Equus	ANCESTRAL SPECIES	3	ENSGT00390000014494.nb.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000165376	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Horse	MODERN SPECIES	26	ENSECAG00000037018	DENND2C (ENSECAG00000019594)	AMPD1 (ENSECAG00000014907)	NRAS (ENSECAG00000013942)	CSDE1 (ENSECAG00000020885)	SIKE1 (ENSECAG00000019395)	ENSECAG00000015617	SYCP1 (ENSECAG00000013010)	TSHB (ENSECAG00000045218)	TSPAN2 (ENSECAG00000010966)	NGF (ENSECAG00000010553)	VANGL1 (ENSECAG00000008137) #18	CASQ2 (ENSECAG00000021854) #19	NHLH2 (ENSECAG00000030954) #20	SLC22A15 (ENSECAG00000020117) #21	MAB21L3 (ENSECAG00000019090) #22	ATP1A1 (ENSECAG00000024623) #23	ENSECAG00000056436	ENSECAG00000057106 #25	CD2 (ENSECAG00000019437) #27	IGSF3 (ENSECAG00000022378) #26	PTGFRN (ENSECAG00000017101) #28	CD101 (ENSECAG00000017048) #29	TTF2 (ENSECAG00000012474)	TRIM45 (ENSECAG00000010259) #31	VTCN1 (ENSECAG00000008749) #32	MAN1A2 (ENSECAG00000019681) #33	TENT5C (ENSECAG00000019626) #34	GDAP2 (ENSECAG00000014270) #35	WDR3 (ENSECAG00000006575) #36	SPAG17 (ENSECAG00000024156) #37
Donkey	MODERN SPECIES	7	BCAS2 (ENSEASG00005006268)	DENND2C (ENSEASG00005006273)	AMPD1 (ENSEASG00005006275)	NRAS (ENSEASG00005006279)	CSDE1 (ENSEASG00005006284)	SIKE1 (ENSEASG00005034759)	ENSEASG00005006296	SYCP1 (ENSEASG00005006304)	TSHB (ENSEASG00005006325)	TSPAN2 (ENSEASG00005006328)	NGF (ENSEASG00005006332)	VANGL1 (ENSEASG00005006335) #18	CASQ2 (ENSEASG00005006338) #19	NHLH2 (ENSEASG00005031693) #20	SLC22A15 (ENSEASG00005006345) #21	MAB21L3 (ENSEASG00005006347) #22	ATP1A1 (ENSEASG00005006353) #23	ENSEASG00005006357 #25	IGSF3 (ENSEASG00005006358) #26	CD2 (ENSEASG00005006361) #27	PTGFRN (ENSEASG00005006364) #28	CD101 (ENSEASG00005006367) #29	ENSEASG00005006374	TRIM45 (ENSEASG00005006386) #31	VTCN1 (ENSEASG00005006388) #32	MAN1A2 (ENSEASG00005006389) #33	TENT5C (ENSEASG00005033293) #34	GDAP2 (ENSEASG00005006392) #35	WDR3 (ENSEASG00005006393) #36	SPAG17 (ENSEASG00005024790) #37	TBX15 (ENSEASG00005006401)
Atlantogenata	ANCESTRAL SPECIES	26	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Afrotheria	ANCESTRAL SPECIES	31	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Afrotheria_a	ANCESTRAL SPECIES	31	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #26	ENSGT01030000234540.E #27	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013	ENSGT00940000153724.A
Elephant	MODERN SPECIES	26	DENND2C (ENSLAFG00000003184)	AMPD1 (ENSLAFG00000007144)	NRAS (ENSLAFG00000020706)	CSDE1 (ENSLAFG00000007150)	SIKE1 (ENSLAFG00000010502)	ENSLAFG00000028744	ENSLAFG00000030508	TSHB (ENSLAFG00000030671)	TSPAN2 (ENSLAFG00000006453)	NGF (ENSLAFG00000028282)	ENSLAFG00000022285	VANGL1 (ENSLAFG00000003272) #18	CASQ2 (ENSLAFG00000003274) #19	NHLH2 (ENSLAFG00000007456) #20	SLC22A15 (ENSLAFG00000004144) #21	MAB21L3 (ENSLAFG00000023352) #22	ATP1A1 (ENSLAFG00000015690) #23	IGSF3 (ENSLAFG00000000958) #26	CD2 (ENSLAFG00000014389) #27	PTGFRN (ENSLAFG00000005517) #28	CD101 (ENSLAFG00000005521) #29	ENSLAFG00000006808	TRIM45 (ENSLAFG00000005156) #31	VTCN1 (ENSLAFG00000006818) #32	MAN1A2 (ENSLAFG00000017263) #33	TENT5C (ENSLAFG00000014696) #34	GDAP2 (ENSLAFG00000012098) #35	WDR3 (ENSLAFG00000012108) #36	SPAG17 (ENSLAFG00000012115) #37	TBX15 (ENSLAFG00000018452)	WARS2 (ENSLAFG00000018455)
Hyrax	MODERN SPECIES	5642																MAB21L3 (ENSPCAG00000009045) #22
Xenarthra	ANCESTRAL SPECIES	1698																ENSGT01050000244827.B #22	ENSGT00940000154840.b #23
Armadillo	MODERN SPECIES	3822														SLC22A15 (ENSDNOG00000016384) #21	ENSDNOG00000045952	MAB21L3 (ENSDNOG00000016388) #22	ATP1A1 (ENSDNOG00000010484) #23
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.x	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT00960000186961	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.x	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT00960000186961	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.x	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT00960000186961	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947.x	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318	ENSGT00390000003368	ENSGT00940000158152	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000155177.b #26	ENSGT00960000186961	ENSGT00940000158367 #28	ENSGT00940000161722 #29	ENSGT00940000162718	ENSGT00940000154334.k #31	ENSGT00940000157300 #32	ENSGT00940000157498 #33	ENSGT00940000158856 #34	ENSGT00940000156336 #35	ENSGT00940000153859.a #36	ENSGT00390000013693 #37	ENSGT00940000159013
Common wonbat	MODERN SPECIES	1021	AMPD1 (ENSVURG00010009682)	NRAS (ENSVURG00010009675)	CSDE1 (ENSVURG00010009236)	SIKE1 (ENSVURG00010009209)	ENSVURG00010008750	ENSVURG00010008707	TSHB (ENSVURG00010008697)	TSPAN2 (ENSVURG00010008617)	ENSVURG00010008604	NGF (ENSVURG00010008601)	ENSVURG00010008585	VANGL1 (ENSVURG00010008571) #18	CASQ2 (ENSVURG00010008538) #19	NHLH2 (ENSVURG00010008530) #20	SLC22A15 (ENSVURG00010008519) #21	MAB21L3 (ENSVURG00010008509) #22	ENSVURG00010008506	ATP1A1 (ENSVURG00010008458) #23	ENSVURG00010008439 #25	IGSF3 (ENSVURG00010008429) #26	ENSVURG00010008419	PTGFRN (ENSVURG00010008404) #28	CD101 (ENSVURG00010008389) #29	TTF2 (ENSVURG00010008350)	TRIM45 (ENSVURG00010008336) #31	VTCN1 (ENSVURG00010008325) #32	MAN1A2 (ENSVURG00010008291) #33	TENT5C (ENSVURG00010008285) #34	GDAP2 (ENSVURG00010008266) #35	WDR3 (ENSVURG00010008236) #36	SPAG17 (ENSVURG00010008196) #37
koala	MODERN SPECIES	4	DENND2C (ENSPCIG00000025107)	AMPD1 (ENSPCIG00000022674)	NRAS (ENSPCIG00000022594)	CSDE1 (ENSPCIG00000022587)	SIKE1 (ENSPCIG00000022581)	ENSPCIG00000022577	SYCP1 (ENSPCIG00000022572)	TSHB (ENSPCIG00000022570)	TSPAN2 (ENSPCIG00000022568)	ENSPCIG00000022566	NGF (ENSPCIG00000028939)	VANGL1 (ENSPCIG00000001310) #18	CASQ2 (ENSPCIG00000001270) #19	NHLH2 (ENSPCIG00000031517) #20	SLC22A15 (ENSPCIG00000033801) #21	MAB21L3 (ENSPCIG00000010827) #22	ATP1A1 (ENSPCIG00000004151) #23	ENSPCIG00000005860 #25	IGSF3 (ENSPCIG00000005858) #26	ENSPCIG00000031241	ENSPCIG00000033767	PTGFRN (ENSPCIG00000003461) #28	CD101 (ENSPCIG00000003473) #29	TTF2 (ENSPCIG00000003483)	TRIM45 (ENSPCIG00000003500) #31	VTCN1 (ENSPCIG00000003514) #32	MAN1A2 (ENSPCIG00000023762) #33	TENT5C (ENSPCIG00000009669) #34	GDAP2 (ENSPCIG00000000919) #35	WDR3 (ENSPCIG00000000938) #36	SPAG17 (ENSPCIG00000000977) #37
Wallaby	MODERN SPECIES	8193																ENSMEUG00000004128 #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000008467	CSDE1 (ENSSHAG00000009831)	AMPD1 (ENSSHAG00000009444)	SIKE1 (ENSSHAG00000026566)	ENSSHAG00000010518	SYCP1 (ENSSHAG00000010670)	TSHB (ENSSHAG00000011393)	TSPAN2 (ENSSHAG00000032135)	ENSSHAG00000011855	NGF (ENSSHAG00000013026)	VANGL1 (ENSSHAG00000014752) #18	CASQ2 (ENSSHAG00000014881) #19	NHLH2 (ENSSHAG00000015472) #20	ENSSHAG00000026266	SLC22A15 (ENSSHAG00000015912) #21	MAB21L3 (ENSSHAG00000022094) #22	ATP1A1 (ENSSHAG00000016979) #23	ENSSHAG00000017292 #25	IGSF3 (ENSSHAG00000027689) #26	ENSSHAG00000017759	PTGFRN (ENSSHAG00000018051) #28	CD101 (ENSSHAG00000018141) #29	TTF2 (ENSSHAG00000018195)	TRIM45 (ENSSHAG00000018250) #31	VTCN1 (ENSSHAG00000018283) #32	MAN1A2 (ENSSHAG00000006188) #33	TENT5C (ENSSHAG00000024267) #34	GDAP2 (ENSSHAG00000003812) #35	WDR3 (ENSSHAG00000005169) #36	SPAG17 (ENSSHAG00000005600) #37	ENSSHAG00000031021
Opossum	MODERN SPECIES	1	DENND2C (ENSMODG00000000348)	AMPD1 (ENSMODG00000004578)	NRAS (ENSMODG00000004590)	CSDE1 (ENSMODG00000004685)	SIKE1 (ENSMODG00000004700)	ENSMODG00000004721	SYCP1 (ENSMODG00000004800)	TSHB (ENSMODG00000004806)	TSPAN2 (ENSMODG00000004828)	ENSMODG00000004846	NGF (ENSMODG00000004863)	ENSMODG00000023229 ##18	CASQ2 (ENSMODG00000004914) #19	NHLH2 (ENSMODG00000023228) #20	SLC22A15 (ENSMODG00000004931) #21	MAB21L3 (ENSMODG00000004947) #22	ATP1A1 (ENSMODG00000005035) #23	ENSMODG00000039584	IGSF3 (ENSMODG00000005063) #26	ENSMODG00000005074	PTGFRN (ENSMODG00000005096) #28	CD101 (ENSMODG00000005103) #29	TTF2 (ENSMODG00000005145)	TRIM45 (ENSMODG00000005160) #31	VTCN1 (ENSMODG00000047962) #32	MAN1A2 (ENSMODG00000005193) #33	TENT5C (ENSMODG00000023227) #34	GDAP2 (ENSMODG00000005215) #35	ENSMODG00000042799	ENSMODG00000028610	WDR3 (ENSMODG00000005243) #36
Platypus	MODERN SPECIES	7	ENSOANG00000043528	GSK3B (ENSOANG00000001670)	ENSOANG00000050472	ENSOANG00000041372	COX17 (ENSOANG00000037632)	ENSOANG00000048908	PLA1A (ENSOANG00000048291)	ENSOANG00000040539	ADPRH (ENSOANG00000037344)	ENSOANG00000050911	POGLUT1 (ENSOANG00000044666)	VANGL1 (ENSOANG00000042017) #18	ENSOANG00000021966 #19	NHLH2 (ENSOANG00000009820) #20	SLC22A15 (ENSOANG00000044054) #21	MAB21L3 (ENSOANG00000002511) #22	ATP1A1 (ENSOANG00000037687) #23	ENSOANG00000040389	ENSOANG00000040078	IGSF3 (ENSOANG00000048085) #26	TMEM39A (ENSOANG00000047837)	ENSOANG00000039096	B4GALT4 (ENSOANG00000044285)	UPK1B (ENSOANG00000049892)	IGSF11 (ENSOANG00000044874)	HSD17B7 (ENSOANG00000048102)	RGS5 (ENSOANG00000044194)	RGS4 (ENSOANG00000046116)	NUF2 (ENSOANG00000045469)	PBX1 (ENSOANG00000006908)	LMX1A (ENSOANG00000043211)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Lepidosauria	ANCESTRAL SPECIES	96				ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000161796	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Laterata	ANCESTRAL SPECIES	7	ENSGT00390000002109	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694
Common wall lizard	MODERN SPECIES	8										CHD1L (ENSPMRG00000023281)	VANGL1 (ENSPMRG00000023286) #18	ENSPMRG00000023288	ENSPMRG00000023291	NHLH2 (ENSPMRG00000016824) #20	SLC22A15 (ENSPMRG00000016829) #21	MAB21L3 (ENSPMRG00000016836) #22	ENSPMRG00000016841	ATP1A1 (ENSPMRG00000016847) #23	PLA1A (ENSPMRG00000016859)	POPDC2 (ENSPMRG00000016870)	COX17 (ENSPMRG00000016875)	CFAP91 (ENSPMRG00000016880)	GSK3B (ENSPMRG00000016914)	GPR156 (ENSPMRG00000016925)	LRRC58 (ENSPMRG00000016931)	ENSPMRG00000016932	FSTL1 (ENSPMRG00000016933)	NDUFB4 (ENSPMRG00000016944)	HGD (ENSPMRG00000016953)	RABL3 (ENSPMRG00000016963)	GTF2E1 (ENSPMRG00000016971)
Argentine black and white tegu	MODERN SPECIES	45	ENSSMRG00000004447	TMEM52B (ENSSMRG00000004442)	GABARAPL1 (ENSSMRG00000004405)	ENSSMRG00000004399	TRPC4 (ENSSMRG00000003736)	POSTN (ENSSMRG00000003693)	SUPT20H (ENSSMRG00000003469)	EXOSC8 (ENSSMRG00000003449)	ALG5 (ENSSMRG00000003444)	TMEM39A (ENSSMRG00000003426)	ENSSMRG00000003418	VANGL1 (ENSSMRG00000003416) #18	CASQ2 (ENSSMRG00000003383) #19	NHLH2 (ENSSMRG00000003377) #20	SLC22A15 (ENSSMRG00000003365) #21	MAB21L3 (ENSSMRG00000003324) #22	ATP1A1 (ENSSMRG00000003307) #23	CYP4F22 (ENSSMRG00000003283)	PGLYRP2 (ENSSMRG00000003278)	LDLR (ENSSMRG00000003274)	ENSSMRG00000003234	KANK2 (ENSSMRG00000003219)	DOCK6 (ENSSMRG00000003144)	ENSSMRG00000003121	RAB3D (ENSSMRG00000003115)	PLPPR2 (ENSSMRG00000003063)	SWSAP1 (ENSSMRG00000003060)	EPOR (ENSSMRG00000003055)	RGL3 (ENSSMRG00000003033)	ENSSMRG00000003025	PRKCSH (ENSSMRG00000003008)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000161796	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694
Lizard	MODERN SPECIES	1	ENSACAG00000040255	POSTN (ENSACAG00000017600)	ENSACAG00000029033	ENSACAG00000035608	SUPT20H (ENSACAG00000017639)	ENSACAG00000045496	EXOSC8 (ENSACAG00000040511)	ALG5 (ENSACAG00000017663)	ENSACAG00000017673	ENSACAG00000028701	ENSACAG00000017686	VANGL1 (ENSACAG00000003153) #18	CASQ2 (ENSACAG00000003187) #19	ENSACAG00000003304	SLC22A15 (ENSACAG00000003327) #21	MAB21L3 (ENSACAG00000003399) #22	ENSACAG00000037716	ENSACAG00000007813	ENSACAG00000007823	ENSACAG00000007871	ENSACAG00000008098	ENSACAG00000026130	ENSACAG00000008192	IDH3G (ENSACAG00000008220)	SRPK3 (ENSACAG00000008280)	PLXNB3 (ENSACAG00000008378)	ENSACAG00000029519	ABCD1 (ENSACAG00000008539)	BCAP31 (ENSACAG00000008629)	ENSACAG00000045378	ENSACAG00000008691
tuatara	MODERN SPECIES	1096	RACGAP1 (ENSSPUG00000016669)	ENSSPUG00000016720	ENSSPUG00000016735	AQP6 (ENSSPUG00000016757)	TRPC4 (ENSSPUG00000016771)	POSTN (ENSSPUG00000016779)	SUPT20H (ENSSPUG00000016802)	EXOSC8 (ENSSPUG00000016825)	ALG5 (ENSSPUG00000016834)	TMEM39A (ENSSPUG00000016848)	CHD1L (ENSSPUG00000016865)	VANGL1 (ENSSPUG00000016879) #18	CASQ2 (ENSSPUG00000016892) #19	NHLH2 (ENSSPUG00000016906) #20	SLC22A15 (ENSSPUG00000016922) #21	MAB21L3 (ENSSPUG00000016959) #22	ATP1A1 (ENSSPUG00000016982) #23	ENSSPUG00000017027 #25	PLA1A (ENSSPUG00000017042)	POPDC2 (ENSSPUG00000017054)	ENSSPUG00000017067	CFAP91 (ENSSPUG00000017093)	GSK3B (ENSSPUG00000017220)	LRRC58 (ENSSPUG00000017254)	FSTL1 (ENSSPUG00000017282)	ENSSPUG00000017292	HGD (ENSSPUG00000017347)	RABL3 (ENSSPUG00000017490)	GTF2E1 (ENSSPUG00000017495)
Archelosauria	ANCESTRAL SPECIES	30	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000168076	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000158516	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696.hc.a
Emydidae	ANCESTRAL SPECIES	36	ENSGT00940000158516	ENSGT00940000161188.c.a.b	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01030000235556	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT01040000242649	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467
painted turtle	MODERN SPECIES		IGSF11 (ENSCPBG00000002888)	UPK1B (ENSCPBG00000002847)	ARHGAP31 (ENSCPBG00000002832)	ENSCPBG00000002821	ENSCPBG00000002779	ENSCPBG00000002738	B4GALT4 (ENSCPBG00000002710)	ENSCPBG00000002678	TMEM39A (ENSCPBG00000002656)	ENSCPBG00000002639	CHD1L (ENSCPBG00000002600)	VANGL1 (ENSCPBG00000002571) #18	CASQ2 (ENSCPBG00000002545) #19	NHLH2 (ENSCPBG00000002535) #20	SLC22A15 (ENSCPBG00000002507) #21	MAB21L3 (ENSCPBG00000002492) #22	ENSCPBG00000002478	ATP1A1 (ENSCPBG00000002472) #23	ENSCPBG00000002355 #25	PLA1A (ENSCPBG00000002278)	POPDC2 (ENSCPBG00000002262)	ENSCPBG00000002241	CFAP91 (ENSCPBG00000002188)	GSK3B (ENSCPBG00000002148)	GPR156 (ENSCPBG00000002112)	LRRC58 (ENSCPBG00000002101)	FSTL1 (ENSCPBG00000002072)	NDUFB4 (ENSCPBG00000002050)	HGD (ENSCPBG00000002015)	RABL3 (ENSCPBG00000001999)	GTF2E1 (ENSCPBG00000001978)
Three-toed box turtle	MODERN SPECIES	114	LSAMP (ENSTMTG00000004924)	ENSTMTG00000004881	IGSF11 (ENSTMTG00000004818)	UPK1B (ENSTMTG00000004724)	ARHGAP31 (ENSTMTG00000004686)	ENSTMTG00000004547	ENSTMTG00000004515	B4GALT4 (ENSTMTG00000004505)	TMEM39A (ENSTMTG00000004488)	ENSTMTG00000004408	CHD1L (ENSTMTG00000004351)	VANGL1 (ENSTMTG00000004331) #18	CASQ2 (ENSTMTG00000004186) #19	NHLH2 (ENSTMTG00000004165) #20	SLC22A15 (ENSTMTG00000004132) #21	MAB21L3 (ENSTMTG00000004115) #22	ENSTMTG00000004093	ATP1A1 (ENSTMTG00000004043) #23	PLA1A (ENSTMTG00000004015)	POPDC2 (ENSTMTG00000003880)	COX17 (ENSTMTG00000003860)	ENSTMTG00000003847	ENSTMTG00000003833	ENSTMTG00000003818	ENSTMTG00000003808	CFAP91 (ENSTMTG00000003678)	GSK3B (ENSTMTG00000003614)	GPR156 (ENSTMTG00000003580)	LRRC58 (ENSTMTG00000003570)	FSTL1 (ENSTMTG00000003539)	NDUFB4 (ENSTMTG00000003518)
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000158516	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696.hc.a
Abingdon island giant tortoise	MODERN SPECIES	2119											VANGL1 (ENSCABG00000018702) #18	CASQ2 (ENSCABG00000018699) #19	NHLH2 (ENSCABG00000018697) #20	ENSCABG00000018696 #21	ENSCABG00000018695 #21	MAB21L3 (ENSCABG00000018693) #22	ATP1A1 (ENSCABG00000018458) #23	ENSCABG00000018421 #25	PLA1A (ENSCABG00000018418)	POPDC2 (ENSCABG00000018409)	COX17 (ENSCABG00000018404)	CFAP91 (ENSCABG00000018389)	GSK3B (ENSCABG00000018385)	GPR156 (ENSCABG00000018384)	LRRC58 (ENSCABG00000018383)	FSTL1 (ENSCABG00000018380)
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005000481	ENSGEVG00005000488	IGSF11 (ENSGEVG00005000512)	UPK1B (ENSGEVG00005000534)	ARHGAP31 (ENSGEVG00005000557)	ENSGEVG00005000587	ENSGEVG00005000598	B4GALT4 (ENSGEVG00005000616)	TMEM39A (ENSGEVG00005000643)	ENSGEVG00005000681	CHD1L (ENSGEVG00005000712)	VANGL1 (ENSGEVG00005000739) #18	CASQ2 (ENSGEVG00005000799) #19	NHLH2 (ENSGEVG00005000818) #20	SLC22A15 (ENSGEVG00005000829) #21	MAB21L3 (ENSGEVG00005000850) #22	ATP1A1 (ENSGEVG00005000870) #23	ENSGEVG00005000905	ENSGEVG00005000922 #25	PLA1A (ENSGEVG00005000951)	POPDC2 (ENSGEVG00005000985)	COX17 (ENSGEVG00005001021)	ENSGEVG00005001033	CFAP91 (ENSGEVG00005001084)	GSK3B (ENSGEVG00005001193)	GPR156 (ENSGEVG00005001247)	LRRC58 (ENSGEVG00005001266)	FSTL1 (ENSGEVG00005001285)	ENSGEVG00005001314	NDUFB4 (ENSGEVG00005001388)	HGD (ENSGEVG00005001401)
Chinese turtle	MODERN SPECIES	1836											TMEM39A (ENSPSIG00000011628)	ENSPSIG00000011910	CHD1L (ENSPSIG00000012595)	CASQ2 (ENSPSIG00000014323) #19	SLC22A15 (ENSPSIG00000016056) #21	MAB21L3 (ENSPSIG00000016310) #22	ATP1A1 (ENSPSIG00000016388) #23	PLA1A (ENSPSIG00000006753)	POPDC2 (ENSPSIG00000007812)	ENSPSIG00000001991	CFAP91 (ENSPSIG00000008161)	GSK3B (ENSPSIG00000008971)	GPR156 (ENSPSIG00000010275)	LRRC58 (ENSPSIG00000010373)	FSTL1 (ENSPSIG00000010391)	HGD (ENSPSIG00000011020)	RABL3 (ENSPSIG00000011358)	GTF2E1 (ENSPSIG00000012408)	STXBP5L (ENSPSIG00000012718)	POLQ (ENSPSIG00000013657)	METTL16 (ENSPSIG00000014760)
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Aves	ANCESTRAL SPECIES		ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Neognathae_b	ANCESTRAL SPECIES		ENSGT01030000235231	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467
Passeriformes	ANCESTRAL SPECIES	1	ENSGT01030000235231	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT01030000235231	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT01030000235231	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Medium ground finch	MODERN SPECIES	23	GAP43 (ENSGFOG00000002241)	ENSGFOG00000002245	LSAMP (ENSGFOG00000002247)	IGSF11 (ENSGFOG00000002265)	UPK1B (ENSGFOG00000002278)	ARHGAP31 (ENSGFOG00000002291)	ENSGFOG00000002315	ENSGFOG00000002335	B4GALT4 (ENSGFOG00000002353)	TMEM39A (ENSGFOG00000002378)	ENSGFOG00000002391	CHD1L (ENSGFOG00000002423)	VANGL1 (ENSGFOG00000002463) #18	CASQ2 (ENSGFOG00000002484) #19	SLC22A15 (ENSGFOG00000002542) #21	MAB21L3 (ENSGFOG00000002563) #22	ATP1A1 (ENSGFOG00000002575) #23	ENSGFOG00000002615	ENSGFOG00000002627 #25	PLA1A (ENSGFOG00000000028)	POPDC2 (ENSGFOG00000000029)	ENSGFOG00000000031	CFAP91 (ENSGFOG00000000032)	GSK3B (ENSGFOG00000000035)	GPR156 (ENSGFOG00000000036)	LRRC58 (ENSGFOG00000000041)	FSTL1 (ENSGFOG00000000047)	ENSGFOG00000000053	HGD (ENSGFOG00000000064)	ENSGFOG00000000090	GTF2E1 (ENSGFOG00000000093)
Passeroidea	ANCESTRAL SPECIES	5	ENSGT01030000235231	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Common canary	MODERN SPECIES	4	ENSSCAG00000009430	LSAMP (ENSSCAG00000009446)	ENSSCAG00000009462	IGSF11 (ENSSCAG00000009501)	UPK1B (ENSSCAG00000009521)	ARHGAP31 (ENSSCAG00000009531)	ENSSCAG00000009539	ENSSCAG00000009571	B4GALT4 (ENSSCAG00000009577)	TMEM39A (ENSSCAG00000009590)	ENSSCAG00000009597	CHD1L (ENSSCAG00000009606)	VANGL1 (ENSSCAG00000009621) #18	CASQ2 (ENSSCAG00000009630) #19	SLC22A15 (ENSSCAG00000009657) #21	MAB21L3 (ENSSCAG00000009662) #22	ATP1A1 (ENSSCAG00000009673) #23	ENSSCAG00000009678	ENSSCAG00000009682 #25	PLA1A (ENSSCAG00000009691)	POPDC2 (ENSSCAG00000009705)	ENSSCAG00000009708	CFAP91 (ENSSCAG00000009721)	GSK3B (ENSSCAG00000009741)	GPR156 (ENSSCAG00000009744)	LRRC58 (ENSSCAG00000009753)	FSTL1 (ENSSCAG00000009760)	NDUFB4 (ENSSCAG00000009763)	HGD (ENSSCAG00000009770)	RABL3 (ENSSCAG00000009779)	GTF2E1 (ENSSCAG00000009784)
Flycatcher	MODERN SPECIES		ENSFALG00000025602	LSAMP (ENSFALG00000006033)	IGSF11 (ENSFALG00000006041)	UPK1B (ENSFALG00000026624)	ENSFALG00000028286	ENSFALG00000006064	ENSFALG00000006068	B4GALT4 (ENSFALG00000006070)	ENSFALG00000006072	ENSFALG00000006077	ENSFALG00000006087	VANGL1 (ENSFALG00000006097) #18	CASQ2 (ENSFALG00000006100) #19	ENSFALG00000006103	SLC22A15 (ENSFALG00000006106) #21	MAB21L3 (ENSFALG00000006110) #22	ATP1A1 (ENSFALG00000006143) #23	ENSFALG00000024943	TBX19 (ENSFALG00000005706)	SFT2D2 (ENSFALG00000028942)	TIPRL (ENSFALG00000005729)	GPR161 (ENSFALG00000005743)	ENSFALG00000005755 #30	ENSFALG00000005759	ENSFALG00000005771	ENSFALG00000005788	ENSFALG00000023110	ENSFALG00000005803	CMSS1 (ENSFALG00000025596)	ENSFALG00000005829	TBC1D23 (ENSFALG00000005843)
Great tit	MODERN SPECIES		GAP43 (ENSPMJG00000010900)	LSAMP (ENSPMJG00000010853)	IGSF11 (ENSPMJG00000010812)	UPK1B (ENSPMJG00000010779)	ARHGAP31 (ENSPMJG00000010778)	ENSPMJG00000010776	ENSPMJG00000010775	B4GALT4 (ENSPMJG00000010774)	TMEM39A (ENSPMJG00000010742)	ENSPMJG00000010739	CHD1L (ENSPMJG00000010736)	VANGL1 (ENSPMJG00000010735) #18	CASQ2 (ENSPMJG00000010731) #19	NHLH2 (ENSPMJG00000010729) #20	SLC22A15 (ENSPMJG00000010688) #21	MAB21L3 (ENSPMJG00000010685) #22	ATP1A1 (ENSPMJG00000010677) #23	ENSPMJG00000010675 #25	PLA1A (ENSPMJG00000010672)	POPDC2 (ENSPMJG00000010671)	COX17 (ENSPMJG00000010664)	CFAP91 (ENSPMJG00000010605)	GSK3B (ENSPMJG00000010600)	GPR156 (ENSPMJG00000010598)	LRRC58 (ENSPMJG00000010597)	ENSPMJG00000010530	FSTL1 (ENSPMJG00000010529)	ENSPMJG00000010528	HGD (ENSPMJG00000010526)	RABL3 (ENSPMJG00000010524)	GTF2E1 (ENSPMJG00000010522)
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00730000111265	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Kakapo	MODERN SPECIES	28	ZBTB20 (ENSSHBG00005009134)	GAP43 (ENSSHBG00005009180)	LSAMP (ENSSHBG00005009198)	IGSF11 (ENSSHBG00005009215)	UPK1B (ENSSHBG00005009226)	ARHGAP31 (ENSSHBG00005009255)	ENSSHBG00005009265	ENSSHBG00005009271	B4GALT4 (ENSSHBG00005009283)	TMEM39A (ENSSHBG00005009297)	ENSSHBG00005009317	VANGL1 (ENSSHBG00005009329) #18	CASQ2 (ENSSHBG00005009342) #19	ENSSHBG00005009363	SLC22A15 (ENSSHBG00005009376) #21	MAB21L3 (ENSSHBG00005009404) #22	ATP1A1 (ENSSHBG00005009427) #23	ENSSHBG00005009455	ENSSHBG00005009467	MIX23 (ENSSHBG00005009487)	FAM162A (ENSSHBG00005009499)	KPNA1 (ENSSHBG00005009510)	FBXO40 (ENSSHBG00005009521)	SCNN1A (ENSSHBG00005009530)	VAMP1 (ENSSHBG00005009551)	MRPL51 (ENSSHBG00005009560)	NCAPD2 (ENSSHBG00005000924)	ENSSHBG00005000939	GAPDH (ENSSHBG00005000947)	IFFO1 (ENSSHBG00005000954)	NOP2 (ENSSHBG00005005753)
Golden eagle	MODERN SPECIES	23	LSAMP (ENSACCG00020001591)	ENSACCG00020001577	IGSF11 (ENSACCG00020001558)	UPK1B (ENSACCG00020001519)	ARHGAP31 (ENSACCG00020001486)	ENSACCG00020001472	ENSACCG00020001447	B4GALT4 (ENSACCG00020001427)	TMEM39A (ENSACCG00020001402)	ENSACCG00020001380	CHD1L (ENSACCG00020001177)	VANGL1 (ENSACCG00020000895) #18	CASQ2 (ENSACCG00020000868) #19	NHLH2 (ENSACCG00020000844) #20	SLC22A15 (ENSACCG00020000808) #21	MAB21L3 (ENSACCG00020000703) #22	ATP1A1 (ENSACCG00020000664) #23	ENSACCG00020000616 #25	PLA1A (ENSACCG00020000537)	POPDC2 (ENSACCG00020000516)	ENSACCG00020000466	CFAP91 (ENSACCG00020000422)	GSK3B (ENSACCG00020000388)	GPR156 (ENSACCG00020000354)	LRRC58 (ENSACCG00020000335)	FSTL1 (ENSACCG00020016401)	NDUFB4 (ENSACCG00020016392)	HGD (ENSACCG00020016380)	RABL3 (ENSACCG00020016375)	GTF2E1 (ENSACCG00020016373)	STXBP5L (ENSACCG00020016362)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01030000235556	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01030000235556	ENSGT00940000154840.b #23	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT01030000235556	ENSGT00940000154840.b #23	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Chicken	MODERN SPECIES		GAP43 (ENSGALG00010006492)	LSAMP (ENSGALG00010006446)	IGSF11 (ENSGALG00010025653)	UPK1B (ENSGALG00010025594)	ARHGAP31 (ENSGALG00010025574)	B3GAT1L (ENSGALG00010025548)	B4GALT3 (ENSGALG00010025531)	B4GALT4 (ENSGALG00010025523)	TMEM39A (ENSGALG00010025481)	ENSGALG00010025465	CHD1L (ENSGALG00010025448)	VANGL1 (ENSGALG00010025428) #18	CASQ2 (ENSGALG00010025418) #19	NHLH2 (ENSGALG00010025220) #20	SLC22A15 (ENSGALG00010025400) #21	MAB21L3 (ENSGALG00010025382) #22	ENSGALG00010025350	ATP1A1 (ENSGALG00010025292) #23	PLA1A (ENSGALG00010025182)	POPDC2 (ENSGALG00010025168)	COX17 (ENSGALG00010025147)	CFAP91 (ENSGALG00010025138)	GSK3A (ENSGALG00010025103)	GPR156 (ENSGALG00010025060)	LRRC58 (ENSGALG00010026272)	FSTL1 (ENSGALG00010025032)	NDUFB4 (ENSGALG00010024994)	HGD (ENSGALG00010024948)	RABL3 (ENSGALG00010024940)	GTF2E1 (ENSGALG00010024925)	STXBP5L (ENSGALG00010024915)
Turkey	MODERN SPECIES		GAP43 (ENSMGAG00000014319)	LSAMP (ENSMGAG00000014318)	IGSF11 (ENSMGAG00000014313)	ENSMGAG00000019562	UPK1B (ENSMGAG00000014315)	ENSMGAG00000014314	ENSMGAG00000014312	ENSMGAG00000014308	B4GALT4 (ENSMGAG00000014307)	ENSMGAG00000014306	ENSMGAG00000020983	ENSMGAG00000014304	VANGL1 (ENSMGAG00000014303) #18	CASQ2 (ENSMGAG00000014302) #19	SLC22A15 (ENSMGAG00000014301) #21	MAB21L3 (ENSMGAG00000014300) #22	ATP1A1 (ENSMGAG00000014297) #23	PLA1A (ENSMGAG00000014293)	POPDC2 (ENSMGAG00000014291)	ENSMGAG00000014290	CFAP91 (ENSMGAG00000014289)	GSK3B (ENSMGAG00000014288)	LRRC58 (ENSMGAG00000014285)	FSTL1 (ENSMGAG00000014283)	ENSMGAG00000016069	HGD (ENSMGAG00000014280)	RABL3 (ENSMGAG00000014276)	GTF2E1 (ENSMGAG00000014272)	STXBP5L (ENSMGAG00000014266)	POLQ (ENSMGAG00000014264)	ENSMGAG00000021653
Japanese quail	MODERN SPECIES		GAP43 (ENSCJPG00005017422)	LSAMP (ENSCJPG00005017420)	IGSF11 (ENSCJPG00005017409)	UPK1B (ENSCJPG00005017408)	ARHGAP31 (ENSCJPG00005017407)	ENSCJPG00005017405	ENSCJPG00005017403	B4GALT4 (ENSCJPG00005017401)	TMEM39A (ENSCJPG00005017400)	ENSCJPG00005017399	CHD1L (ENSCJPG00005017397)	VANGL1 (ENSCJPG00005017394) #18	CASQ2 (ENSCJPG00005017386) #19	NHLH2 (ENSCJPG00005017385) #20	SLC22A15 (ENSCJPG00005017383) #21	MAB21L3 (ENSCJPG00005017382) #22	ENSCJPG00005017379	ATP1A1 (ENSCJPG00005017374) #23	PLA1A (ENSCJPG00005017372)	POPDC2 (ENSCJPG00005017369)	ENSCJPG00005017368	CFAP91 (ENSCJPG00005017367)	GSK3B (ENSCJPG00005017366)	GPR156 (ENSCJPG00005017365)	LRRC58 (ENSCJPG00005017363)	FSTL1 (ENSCJPG00005017362)	NDUFB4 (ENSCJPG00005017357)	HGD (ENSCJPG00005017356)	RABL3 (ENSCJPG00005017355)	GTF2E1 (ENSCJPG00005017354)	STXBP5L (ENSCJPG00005017353)
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000168076	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596 #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Duck	MODERN SPECIES		GAP43 (ENSAPLG00000002345)	LSAMP (ENSAPLG00000010325)	IGSF11 (ENSAPLG00000008337)	UPK1B (ENSAPLG00000008825)	ARHGAP31 (ENSAPLG00000009089)	ENSAPLG00000025438	ENSAPLG00000009258	B4GALT4 (ENSAPLG00000009388)	TMEM39A (ENSAPLG00000009675)	ENSAPLG00000009803	CHD1L (ENSAPLG00000009976)	VANGL1 (ENSAPLG00000011029) #18	CASQ2 (ENSAPLG00000011267) #19	NHLH2 (ENSAPLG00000023891) #20	SLC22A15 (ENSAPLG00000012634) #21	MAB21L3 (ENSAPLG00000012622) #22	ATP1A1 (ENSAPLG00000011285) #23	ENSAPLG00000011249 #25	PLA1A (ENSAPLG00000025714)	POPDC2 (ENSAPLG00000019599)	ENSAPLG00000011097	CFAP91 (ENSAPLG00000011017)	GSK3B (ENSAPLG00000007990)	GPR156 (ENSAPLG00000019941)	LRRC58 (ENSAPLG00000029420)	FSTL1 (ENSAPLG00000027059)	NDUFB4 (ENSAPLG00000017845)	HGD (ENSAPLG00000006938)	RABL3 (ENSAPLG00000006732)	GTF2E1 (ENSAPLG00000006481)	STXBP5L (ENSAPLG00000014395)
African ostrich	MODERN SPECIES	620	ENSSCUG00000008280	ENSSCUG00000008282	ENSSCUG00000008283	IGSF11 (ENSSCUG00000008285)	UPK1B (ENSSCUG00000008287)	ARHGAP31 (ENSSCUG00000008288)	ENSSCUG00000008289	ENSSCUG00000008290	B4GALT4 (ENSSCUG00000008291)	TMEM39A (ENSSCUG00000008294)	ENSSCUG00000008297	CHD1L (ENSSCUG00000008298)	VANGL1 (ENSSCUG00000008302) #18	CASQ2 (ENSSCUG00000008304) #19	SLC22A15 (ENSSCUG00000008306) #21	MAB21L3 (ENSSCUG00000008308) #22	ATP1A1 (ENSSCUG00000008337) #23
Australian saltwater crocodile	MODERN SPECIES	60	LSAMP (ENSCPRG00005003806)	ENSCPRG00005003786	IGSF11 (ENSCPRG00005003768)	UPK1B (ENSCPRG00005003732)	ARHGAP31 (ENSCPRG00005003717)	ENSCPRG00005003713	ENSCPRG00005003699	B4GALT4 (ENSCPRG00005003694)	TMEM39A (ENSCPRG00005003687)	ENSCPRG00005003669	CHD1L (ENSCPRG00005003632)	VANGL1 (ENSCPRG00005003618) #18	CASQ2 (ENSCPRG00005003611) #19	NHLH2 (ENSCPRG00005003607) #20	SLC22A15 (ENSCPRG00005003580) #21	MAB21L3 (ENSCPRG00005003561) #22	ATP1A1 (ENSCPRG00005003542) #23	ENSCPRG00005003516	PLA1A (ENSCPRG00005003510)	POPDC2 (ENSCPRG00005003504)	ENSCPRG00005003500	CFAP91 (ENSCPRG00005003491)	GSK3B (ENSCPRG00005003476)	GPR156 (ENSCPRG00005003458)	LRRC58 (ENSCPRG00005003456)	FSTL1 (ENSCPRG00005003453)	NDUFB4 (ENSCPRG00005003439)	HGD (ENSCPRG00005003427)	RABL3 (ENSCPRG00005003423)	GTF2E1 (ENSCPRG00005003420)	STXBP5L (ENSCPRG00005001784)