Sarcopterygii	ANCESTRAL SPECIES	45											ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000155177.a ##24	ENSGT00940000155177.b #24	ENSGT00940000162718 #27	ENSGT00940000164746	ENSGT00940000154334 #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693
Tetrapoda	ANCESTRAL SPECIES	175										ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000164480	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000234540.E #25	ENSGT00940000162718 #27	ENSGT00940000155177.b #24	ENSGT00940000155177.a ##24	ENSGT00940000158367 #26	ENSGT01020000230623
Amniota	ANCESTRAL SPECIES	54								ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT01030000235556	ENSGT00940000155177.b #24	ENSGT00940000155177.a ##24	ENSGT00940000161722	ENSGT00940000158367 #26	ENSGT01030000234540.E #25	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00940000161118	ENSGT00520000055635.c.a	ENSGT00940000159755
Mammalia	ANCESTRAL SPECIES	69	ENSGT00940000159755	ENSGT00520000055635.c.a	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013
Theria	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596	ENSGT00940000155177.b #24	ENSGT00960000186961	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693
Eutheria	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT01100000263543.a
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00510000049596	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT01100000263543.a
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013	ENSGT00940000153724.A
Glires	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013	ENSGT00940000153724.A
Rodentia	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013	ENSGT00940000153724.A
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013	ENSGT00940000153724.A
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000014494	ENSGT00950000182931.B.a.b #7	ENSGT00950000183011.c.a.a #8	ENSGT00940000158947 #9	ENSGT00390000016950 #10	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #18	ENSGT00390000019377.b #19	ENSGT00940000162602 #20	ENSGT00940000160364 #21	ENSGT01050000244827.B #22	ENSGT00940000154840.b #23	ENSGT00940000155177.b #24	ENSGT01030000234540.E #25	ENSGT00940000158367 #26	ENSGT00940000161722	ENSGT00940000162718 #27	ENSGT00940000154334.k #28	ENSGT00940000157300 #29	ENSGT00940000157498 #31	ENSGT00940000158856 #32	ENSGT00940000156336 #36	ENSGT00940000153859.a #37	ENSGT00390000013693	ENSGT00940000159013	ENSGT00940000153724.A
Lesser Egyptian jerboa	MODERN SPECIES	144	Dennd2c (ENSJJAG00000009709) #7	Ampd1 (ENSJJAG00000021675) #8	ENSJJAG00000020941 #9	Csde1 (ENSJJAG00000019571) #10	ENSJJAG00000019089 #11	Nr1h5 (ENSJJAG00000018578) #12	ENSJJAG00000018067 #13	Tshb (ENSJJAG00000001329) #14	Tspan2 (ENSJJAG00000000832) #15	Ngf (ENSJJAG00000022901) #16	ENSJJAG00000021722 #17	Vangl1 (ENSJJAG00000021462) #18	Casq2 (ENSJJAG00000020862) #19	Nhlh2 (ENSJJAG00000019983) #20	Slc22a15 (ENSJJAG00000000255) #21	Mab21l3 (ENSJJAG00000022482) #22	Atp1a1 (ENSJJAG00000020791) #23	Igsf3 (ENSJJAG00000017489) #24	Cd2 (ENSJJAG00000019842) #25	Ptgfrn (ENSJJAG00000019616) #26	Ttf2 (ENSJJAG00000015225) #27	Trim45 (ENSJJAG00000007227) #28	Vtcn1 (ENSJJAG00000019207) #29	ENSJJAG00000018170 #30	Man1a2 (ENSJJAG00000017865) #31	Tent5c (ENSJJAG00000013174) #32	ENSJJAG00000017333 #33	ENSJJAG00000014767 #34	ENSJJAG00000013768 #35	ENSJJAG00000013505 #36	Wdr3 (ENSJJAG00000013861) #37