Fungi/Metazoa group DUPLICATION Fungi/Metazoa group ANCESTRAL SPECIES 10 ENSGT00390000011390 ENSGT01050000244824.F #22 Bilateria ANCESTRAL SPECIES ENSGT01050000244824.F #22 Chordata ANCESTRAL SPECIES ENSGT01050000244824.F #22 Vertebrata ANCESTRAL SPECIES ENSGT01050000244824.F #22 Gnathostomata ANCESTRAL SPECIES 40 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00710000106806 ENSGT00390000006837 ENSGT00390000005903 ENSGT00940000157945 ENSGT00940000158317 ENSGT00940000158123 ENSGT00940000157638 Euteleostomi ANCESTRAL SPECIES 52 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a ENSGT00390000018439 #35 Sarcopterygii ANCESTRAL SPECIES 103 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.B ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Amniota ANCESTRAL SPECIES 22 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Mammalia ANCESTRAL SPECIES 18 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00940000177870 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00940000160568.n Theria ANCESTRAL SPECIES 28 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Eutheria ANCESTRAL SPECIES 14 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Camelidae ANCESTRAL SPECIES 7 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Arabian camel MODERN SPECIES 8 KLF15 (ENSCDRG00005017650) #13 ALDH1L1 (ENSCDRG00005017361) #14 SLC41A3 (ENSCDRG00005017182) #15 ENSCDRG00005017119 #16 UROC1 (ENSCDRG00005017069) #17 TXNRD3 (ENSCDRG00005016948) #18 CHCHD6 (ENSCDRG00005016897) #19 PLXNA1 (ENSCDRG00005012667) #20 TPRA1 (ENSCDRG00005012385) #21 MCM2 (ENSCDRG00005012229) #22 PODXL2 (ENSCDRG00005012159) #23 ABTB1 (ENSCDRG00005012018) #24 MGLL (ENSCDRG00005011712) #25 KBTBD12 (ENSCDRG00005011561) #26 SEC61A1 (ENSCDRG00005011502) #27 RUVBL1 (ENSCDRG00005011446) #28 EEFSEC (ENSCDRG00005010991) #29 ENSCDRG00005010941 #30 GATA2 (ENSCDRG00005010903) #31 RPN1 (ENSCDRG00005010840) #32 RAB7A (ENSCDRG00005010579) #33 H1-10 (ENSCDRG00005010548) #34 HMCES (ENSCDRG00005010445) #35 COPG1 (ENSCDRG00005010147) #36 CNBP (ENSCDRG00005010027) #37 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.b.a #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.j ##32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.b.a #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.j ##32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.b.a #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.j ##32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439.d #35 ENSGT00390000016313.a.b #36 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.b.a #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.j ##32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439.d #35 ENSGT00390000016313.a.b #36 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216.a #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.b.a #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.j ##32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439.d #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Narwhal MODERN SPECIES 310 CFAP100 (ENSMMNG00015014873) KLF15 (ENSMMNG00015014858) #13 ALDH1L1 (ENSMMNG00015014798) #14 SLC41A3 (ENSMMNG00015014716) #15 ENSMMNG00015014677 #16 UROC1 (ENSMMNG00015014633) #17 CHST13 (ENSMMNG00015014619) TXNRD3 (ENSMMNG00015014461) #18 ENSMMNG00015014396 PLXNA1 (ENSMMNG00015014355) #20 TPRA1 (ENSMMNG00015014317) #21 MCM2 (ENSMMNG00015014295) #22 PODXL2 (ENSMMNG00015013667) #23 ABTB1 (ENSMMNG00015013635) #24 ENSMMNG00015013585 #25 KBTBD12 (ENSMMNG00015013549) #26 SEC61A1 (ENSMMNG00015013516) #27 ENSMMNG00015013489 #28 DNAJB8 (ENSMMNG00015013478) #30 EEFSEC (ENSMMNG00015013459) #29 GATA2 (ENSMMNG00015013442) #31 RPN1 (ENSMMNG00015013416) ##32 RAB7A (ENSMMNG00015013387) #33 H1-10 (ENSMMNG00015013367) #34 HMCES (ENSMMNG00015013354) #35 COPG1 (ENSMMNG00015013321) #36 CNBP (ENSMMNG00015013299) #37 Beluga whale MODERN SPECIES 66 CFAP100 (ENSDLEG00000012459) KLF15 (ENSDLEG00000012456) #13 ALDH1L1 (ENSDLEG00000012433) #14 SLC41A3 (ENSDLEG00000012387) #15 ENSDLEG00000012374 #16 ENSDLEG00000012356 #15 ENSDLEG00000012256 #16 UROC1 (ENSDLEG00000012148) #17 CHST13 (ENSDLEG00000012133) ENSDLEG00000012121 TXNRD3 (ENSDLEG00000011052) #18 CHCHD6 (ENSDLEG00000010964) #19 PLXNA1 (ENSDLEG00000010868) #20 ENSDLEG00000010846 TPRA1 (ENSDLEG00000010809) #21 MCM2 (ENSDLEG00000010766) #22 ENSDLEG00000010753 #23 ENSDLEG00000010743 ABTB1 (ENSDLEG00000010723) #24 MGLL (ENSDLEG00000010650) #25 KBTBD12 (ENSDLEG00000010611) #26 SEC61A1 (ENSDLEG00000010591) #27 RUVBL1 (ENSDLEG00000010575) #28 DNAJB8 (ENSDLEG00000010568) #30 EEFSEC (ENSDLEG00000010534) #29 GATA2 (ENSDLEG00000010521) #31 RPN1 (ENSDLEG00000010491) ##32 RAB7A (ENSDLEG00000010466) #33 H1-10 (ENSDLEG00000010459) #34 HMCES (ENSDLEG00000010426) #35 COPG1 (ENSDLEG00000010326) #36 Vaquita MODERN SPECIES 2 CFAP100 (ENSPSNG00000022656) KLF15 (ENSPSNG00000022657) #13 ALDH1L1 (ENSPSNG00000022658) #14 SLC41A3 (ENSPSNG00000022659) #15 ZXDC (ENSPSNG00000022660) #16 UROC1 (ENSPSNG00000022661) #17 CHST13 (ENSPSNG00000022662) ENSPSNG00000022663 TXNRD3 (ENSPSNG00000022664) #18 ENSPSNG00000022665 PLXNA1 (ENSPSNG00000022666) #20 TPRA1 (ENSPSNG00000022668) #21 MCM2 (ENSPSNG00000022669) #22 PODXL2 (ENSPSNG00000022670) #23 ABTB1 (ENSPSNG00000022671) #24 MGLL (ENSPSNG00000022673) #25 ENSPSNG00000022674 #26 SEC61A1 (ENSPSNG00000022676) #27 ENSPSNG00000022677 #28 EEFSEC (ENSPSNG00000022678) #29 ENSPSNG00000022679 DNAJB8 (ENSPSNG00000022680) #30 GATA2 (ENSPSNG00000022681) #31 RPN1 (ENSPSNG00000022682) ##32 RAB7A (ENSPSNG00000022683) #33 H1-10 (ENSPSNG00000022685) #34 HMCES (ENSPSNG00000022686) #35 COPG1 (ENSPSNG00000022687) #36 Dolphin MODERN SPECIES 1477 TPRA1 (ENSTTRG00000017103) #21 MCM2 (ENSTTRG00000017105) #22 PODXL2 (ENSTTRG00000017107) #23 ABTB1 (ENSTTRG00000017109) #24 MGLL (ENSTTRG00000017110) #25 Sperm whale MODERN SPECIES 9 ENSPCTG00005018987 PSMD13 (ENSPCTG00005019034) ENSPCTG00005019159 PLXNA1 (ENSPCTG00005019210) #20 CHCHD6 (ENSPCTG00005019316) #19 TXNRD3 (ENSPCTG00005019379) #18 CHST13 (ENSPCTG00005019410) UROC1 (ENSPCTG00005019468) #17 ZXDC (ENSPCTG00005019762) #16 SLC41A3 (ENSPCTG00005019856) #15 ENSPCTG00005020054 ENSPCTG00005020094 ALDH1L1 (ENSPCTG00005020145) #14 KLF15 (ENSPCTG00005020670) #13 CFAP100 (ENSPCTG00005020699) MCM2 (ENSPCTG00005020839) #22 PODXL2 (ENSPCTG00005020915) #23 ENSPCTG00005020956 ABTB1 (ENSPCTG00005020971) #24 MGLL (ENSPCTG00005021055) #25 KBTBD12 (ENSPCTG00005021183) #26 SEC61A1 (ENSPCTG00005021231) #27 RUVBL1 (ENSPCTG00005021315) #28 ENSPCTG00005021354 #29 GATA2 (ENSPCTG00005021380) #31 RPN1 (ENSPCTG00005021424) ##32 EEFSEC (ENSPCTG00005021497) #29 RAB7A (ENSPCTG00005021510) #33 CNBP (ENSPCTG00005021559) #37 RAB43 (ENSPCTG00005021593) GP9 (ENSPCTG00005021605) Blue whale MODERN SPECIES 2 CFAP100 (ENSBMSG00010009313) KLF15 (ENSBMSG00010009299) #13 ALDH1L1 (ENSBMSG00010009202) #14 ENSBMSG00010009159 SLC41A3 (ENSBMSG00010009132) #15 ZXDC (ENSBMSG00010009104) #16 UROC1 (ENSBMSG00010009072) #17 CHST13 (ENSBMSG00010009052) ENSBMSG00010009042 TXNRD3 (ENSBMSG00010008948) #18 CHCHD6 (ENSBMSG00010008862) #19 PLXNA1 (ENSBMSG00010012942) #20 TPRA1 (ENSBMSG00010012862) #21 MCM2 (ENSBMSG00010012822) #22 PODXL2 (ENSBMSG00010012808) #23 ABTB1 (ENSBMSG00010012797) #24 MGLL (ENSBMSG00010012751) #25 KBTBD12 (ENSBMSG00010012727) #26 SEC61A1 (ENSBMSG00010012693) #27 ENSBMSG00010012665 #28 DNAJB8 (ENSBMSG00010012656) #30 EEFSEC (ENSBMSG00010012611) #29 GATA2 (ENSBMSG00010012574) #31 RPN1 (ENSBMSG00010012549) ##32 RAB7A (ENSBMSG00010012513) #33 H1-10 (ENSBMSG00010012485) #34 HMCES (ENSBMSG00010012470) #35 COPG1 (ENSBMSG00010012394) #36 CNBP (ENSBMSG00010012370) #37 Pecora ANCESTRAL SPECIES 17 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Yarkand deer MODERN SPECIES 16 CFAP100 (ENSCHYG00000013643) KLF15 (ENSCHYG00000013892) #13 ALDH1L1 (ENSCHYG00000013957) #14 SLC41A3 (ENSCHYG00000014509) #15 ZXDC (ENSCHYG00000014680) #16 UROC1 (ENSCHYG00000014990) #17 CHST13 (ENSCHYG00000015340) TXNRD3 (ENSCHYG00000015385) #18 ENSCHYG00000015490 #19 ENSCHYG00000015704 #20 TPRA1 (ENSCHYG00000016085) #21 MCM2 (ENSCHYG00000016311) #22 PODXL2 (ENSCHYG00000016661) #23 ABTB1 (ENSCHYG00000016715) #24 MGLL (ENSCHYG00000016817) #25 KBTBD12 (ENSCHYG00000017212) #26 ENSCHYG00000017330 SEC61A1 (ENSCHYG00000017378) #27 RUVBL1 (ENSCHYG00000017903) #28 EEFSEC (ENSCHYG00000018386) #29 DNAJB8 (ENSCHYG00000018438) #30 ENSCHYG00000018454 GATA2 (ENSCHYG00000018476) #31 ENSCHYG00000018559 #32 ENSCHYG00000018740 #33 H1-10 (ENSCHYG00000018910) #34 HMCES (ENSCHYG00000018936) #35 Percora_a ANCESTRAL SPECIES 19 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Bovidae ANCESTRAL SPECIES 19 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Caprinae ANCESTRAL SPECIES 15 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Rambouillet Sheep MODERN SPECIES 10 CFAP100 (ENSOARG00020019822) KLF15 (ENSOARG00020019792) #13 ENSOARG00020019756 #14 SLC41A3 (ENSOARG00020019589) #15 UROC1 (ENSOARG00020019321) #17 CHST13 (ENSOARG00020019293) ENSOARG00020019263 TXNRD3 (ENSOARG00020019156) #18 ENSOARG00020019013 #19 PLXNA1 (ENSOARG00020018631) #20 TPRA1 (ENSOARG00020018474) #21 MCM2 (ENSOARG00020018340) #22 PODXL2 (ENSOARG00020018264) #23 ENSOARG00020018222 MGLL (ENSOARG00020017820) #25 KBTBD12 (ENSOARG00020017695) #26 SEC61A1 (ENSOARG00020017586) #27 RUVBL1 (ENSOARG00020017524) #28 EEFSEC (ENSOARG00020017339) #29 ENSOARG00020017282 DNAJB8 (ENSOARG00020017252) #30 GATA2 (ENSOARG00020017118) #31 ENSOARG00020017009 #32 RAB7A (ENSOARG00020016775) #33 ENSOARG00020016757 H1-10 (ENSOARG00020016747) #34 HMCES (ENSOARG00020016666) #35 Goat MODERN SPECIES 108 TPRA1 (ENSCHIG00000016889) #21 MCM2 (ENSCHIG00000019820) #22 PODXL2 (ENSCHIG00000023197) #23 Bovinae ANCESTRAL SPECIES 16 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Bos ANCESTRAL SPECIES 16 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Bos_b ANCESTRAL SPECIES 17 ENSGT01100000263503.E.d.a.a.b.b.k.b ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Cow MODERN SPECIES 14 ENSBTAG00000046534 CFAP100 (ENSBTAG00000019402) KLF15 (ENSBTAG00000008313) #13 ALDH1L1 (ENSBTAG00000014470) #14 SLC41A3 (ENSBTAG00000005617) #15 ZXDC (ENSBTAG00000009874) #16 UROC1 (ENSBTAG00000008774) #17 CHST13 (ENSBTAG00000008778) C22H3orf22 (ENSBTAG00000039194) TXNRD3 (ENSBTAG00000011795) #18 CHCHD6 (ENSBTAG00000030855) #19 PLXNA1 (ENSBTAG00000009159) #20 TPRA1 (ENSBTAG00000022575) #21 MCM2 (ENSBTAG00000014380) #22 PODXL2 (ENSBTAG00000018031) #23 ABTB1 (ENSBTAG00000018238) #24 MGLL (ENSBTAG00000018248) #25 KBTBD12 (ENSBTAG00000011547) #26 SEC61A1 (ENSBTAG00000004937) #27 RUVBL1 (ENSBTAG00000020998) #28 EEFSEC (ENSBTAG00000030962) #29 ENSBTAG00000051049 DNAJB8 (ENSBTAG00000006179) #30 GATA2 (ENSBTAG00000019707) #31 RPN1 (ENSBTAG00000005191) #32 ENSBTAG00000030941 RAB7A (ENSBTAG00000010193) #33 H1-10 (ENSBTAG00000040116) #34 HMCES (ENSBTAG00000030930) #35 Hybrid Bos Indicus MODERN SPECIES 14 ENSBIXG00005011495 CFAP100 (ENSBIXG00005011454) KLF15 (ENSBIXG00005000465) #13 ALDH1L1 (ENSBIXG00005001102) #14 SLC41A3 (ENSBIXG00005007101) #15 ZXDC (ENSBIXG00005011270) #16 UROC1 (ENSBIXG00005001051) #17 CHST13 (ENSBIXG00005011148) ENSBIXG00005001025 TXNRD3 (ENSBIXG00005011121) #18 ENSBIXG00005011053 #19 PLXNA1 (ENSBIXG00005001001) #20 ENSBIXG00005000580 #21 MCM2 (ENSBIXG00005010892) #22 PODXL2 (ENSBIXG00005010863) #23 ENSBIXG00005010805 MGLL (ENSBIXG00005010790) #25 KBTBD12 (ENSBIXG00005010709) #26 SEC61A1 (ENSBIXG00005000921) #27 RUVBL1 (ENSBIXG00005010629) #28 EEFSEC (ENSBIXG00005010586) #29 ENSBIXG00005000713 DNAJB8 (ENSBIXG00005010579) #30 GATA2 (ENSBIXG00005010558) #31 RPN1 (ENSBIXG00005001966) #32 ENSBIXG00005005134 RAB7A (ENSBIXG00005029044) #33 H1-10 (ENSBIXG00005005106) #34 HMCES (ENSBIXG00005028993) #35 Bos_a ANCESTRAL SPECIES 9 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630.i.a #32 ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Domestic yak MODERN SPECIES 14 CFAP100 (ENSBGRG00000022740) KLF15 (ENSBGRG00000022957) #13 ALDH1L1 (ENSBGRG00000023010) #14 SLC41A3 (ENSBGRG00000023166) #15 ZXDC (ENSBGRG00000023297) #16 UROC1 (ENSBGRG00000023472) #17 CHST13 (ENSBGRG00000023785) ENSBGRG00000023833 TXNRD3 (ENSBGRG00000023918) #18 CHCHD6 (ENSBGRG00000024662) #19 PLXNA1 (ENSBGRG00000025111) #20 ENSBGRG00000026549 #21 MCM2 (ENSBGRG00000010580) #22 PODXL2 (ENSBGRG00000010818) #23 ENSBGRG00000011063 #25 ENSBGRG00000011409 KBTBD12 (ENSBGRG00000011463) #26 SEC61A1 (ENSBGRG00000011620) #27 RUVBL1 (ENSBGRG00000012210) #28 EEFSEC (ENSBGRG00000012475) #29 ENSBGRG00000012674 #30 ENSBGRG00000012704 #31 RPN1 (ENSBGRG00000012844) #32 ENSBGRG00000012940 RAB7A (ENSBGRG00000013027) #33 ENSBGRG00000013189 #34 HMCES (ENSBGRG00000013212) #35 COPG1 (ENSBGRG00000013407) #36 Wild yak MODERN SPECIES 1037 ENSBMUG00000017733 #21 MCM2 (ENSBMUG00000017754) #22 American bison MODERN SPECIES 2526 MCM2 (ENSBBBG00000004070) #22 Siberian musk deer MODERN SPECIES 195 PLXNA1 (ENSMMSG00000020038) #20 TPRA1 (ENSMMSG00000020007) #21 MCM2 (ENSMMSG00000019878) #22 Suina ANCESTRAL SPECIES 1 ENSGT00390000000805 ENSGT00940000159820 ENSGT00390000000626 ENSGT00940000156398.d ENSGT00940000156177 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Chacoan peccary MODERN SPECIES 949 TPRA1 (ENSCWAG00000019837) #21 MCM2 (ENSCWAG00000019787) #22 PODXL2 (ENSCWAG00000019774) #23 ABTB1 (ENSCWAG00000019756) #24 MGLL (ENSCWAG00000019660) #25 KBTBD12 (ENSCWAG00000019608) #26 SEC61A1 (ENSCWAG00000019570) #27 RUVBL1 (ENSCWAG00000019553) #28 EEFSEC (ENSCWAG00000019470) #29 ENSCWAG00000019462 DNAJB8 (ENSCWAG00000019451) #30 GATA2 (ENSCWAG00000019399) #31 RPN1 (ENSCWAG00000019356) #32 RAB7A (ENSCWAG00000019290) #33 H1-10 (ENSCWAG00000019275) #34 HMCES (ENSCWAG00000019226) #35 COPG1 (ENSCWAG00000019186) #36 Pig MODERN SPECIES 4 TMEM108 (ENSSSCG00000011635) NPHP3 (ENSSSCG00000011632) UBA5 (ENSSSCG00000011631) ACKR4 (ENSSSCG00000011630) ACAD11 (ENSSSCG00000011629) DNAJC13 (ENSSSCG00000011628) ACP3 (ENSSSCG00000011627) ENSSSCG00000056342 CHST13 (ENSSSCG00000011625) ENSSSCG00000011626 ENSSSCG00000045066 TXNRD3 (ENSSSCG00000023929) #18 CHCHD6 (ENSSSCG00000031557) #19 PLXNA1 (ENSSSCG00000024001) #20 TPRA1 (ENSSSCG00000011623) #21 MCM2 (ENSSSCG00000011624) #22 PODXL2 (ENSSSCG00000021397) #23 ABTB1 (ENSSSCG00000024827) #24 MGLL (ENSSSCG00000024134) #25 ENSSSCG00000054607 KBTBD12 (ENSSSCG00000011622) #26 SEC61A1 (ENSSSCG00000011621) #27 RUVBL1 (ENSSSCG00000011620) #28 EEFSEC (ENSSSCG00000011619) #29 ENSSSCG00000011617 DNAJB8 (ENSSSCG00000058052) #30 GATA2 (ENSSSCG00000011618) #31 RPN1 (ENSSSCG00000011612) #32 RAB7A (ENSSSCG00000011615) #33 H1-10 (ENSSSCG00000061599) #34 HMCES (ENSSSCG00000011611) #35 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Carnivora ANCESTRAL SPECIES 6 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Canidae ANCESTRAL SPECIES ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00900000143336.d.a ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Dog MODERN SPECIES 12 ZNF660 (ENSCAFG00845011143) SLC41A3 (ENSCAFG00845011187) #15 ENSCAFG00845011541 #14 ENSCAFG00845011924 KLF15 (ENSCAFG00845011948) #13 CFAP100 (ENSCAFG00845012088) ZXDC (ENSCAFG00845012175) #16 UROC1 (ENSCAFG00845012399) #17 CHST13 (ENSCAFG00845012493) C3orf22 (ENSCAFG00845012512) TXNRD3 (ENSCAFG00845012644) #18 PLXNA1 (ENSCAFG00845013076) #20 ENSCAFG00845013657 ENSCAFG00845013670 TPRA1 (ENSCAFG00845013707) #21 MCM2 (ENSCAFG00845013762) #22 PODXL2 (ENSCAFG00845013813) #23 ABTB1 (ENSCAFG00845013853) #24 MGLL (ENSCAFG00845017684) #25 KBTBD12 (ENSCAFG00845018022) #26 SEC61A1 (ENSCAFG00845018244) #27 RUVBL1 (ENSCAFG00845018527) #28 ENSCAFG00845018606 EEFSEC (ENSCAFG00845018712) #29 DNAJB8 (ENSCAFG00845018870) #30 ENSCAFG00845018909 GATA2 (ENSCAFG00845018934) #31 ENSCAFG00845019001 RPN1 (ENSCAFG00845019047) #32 RAB7A (ENSCAFG00845019242) #33 H1FX (ENSCAFG00845019714) #34 Dingo MODERN SPECIES 236 ZNF197 (ENSCAFG00020000786) ZNF660 (ENSCAFG00020000794) SLC41A3 (ENSCAFG00020000803) #15 ALDH1L1 (ENSCAFG00020000824) #14 ENSCAFG00020000841 KLF15 (ENSCAFG00020000848) #13 CFAP100 (ENSCAFG00020000858) ZXDC (ENSCAFG00020000879) #16 UROC1 (ENSCAFG00020000941) #17 CHST13 (ENSCAFG00020000995) C3orf22 (ENSCAFG00020001002) TXNRD3 (ENSCAFG00020001171) #18 CHCHD6 (ENSCAFG00020002738) #19 PLXNA1 (ENSCAFG00020002883) #20 TPRA1 (ENSCAFG00020004776) #21 MCM2 (ENSCAFG00020004780) #22 PODXL2 (ENSCAFG00020004787) #23 ABTB1 (ENSCAFG00020004789) #24 MGLL (ENSCAFG00020004791) #25 KBTBD12 (ENSCAFG00020004798) #26 SEC61A1 (ENSCAFG00020004799) #27 RUVBL1 (ENSCAFG00020004803) #28 ENSCAFG00020004807 EEFSEC (ENSCAFG00020004811) #29 DNAJB8 (ENSCAFG00020004815) #30 ENSCAFG00020004821 GATA2 (ENSCAFG00020004824) #31 ENSCAFG00020004831 RPN1 (ENSCAFG00020004839) #32 RAB7A (ENSCAFG00020004847) #33 H1-10 (ENSCAFG00020004851) #34 Red fox MODERN SPECIES 8 ZNF35 (ENSVVUG00000021550) ZNF197 (ENSVVUG00000021549) ENSVVUG00000021547 SLC41A3 (ENSVVUG00000021538) #15 ALDH1L1 (ENSVVUG00000021527) #14 KLF15 (ENSVVUG00000021522) #13 CFAP100 (ENSVVUG00000021517) ZXDC (ENSVVUG00000021514) #16 UROC1 (ENSVVUG00000021508) #17 CUNH3orf22 (ENSVVUG00000021504) TXNRD3 (ENSVVUG00000018617) #18 CHCHD6 (ENSVVUG00000018555) #19 PLXNA1 (ENSVVUG00000018526) #20 ENSVVUG00000018521 TPRA1 (ENSVVUG00000018518) #21 MCM2 (ENSVVUG00000018515) #22 PODXL2 (ENSVVUG00000018512) #23 ABTB1 (ENSVVUG00000018416) #24 MGLL (ENSVVUG00000018407) #25 KBTBD12 (ENSVVUG00000018401) #26 SEC61A1 (ENSVVUG00000018390) #27 RUVBL1 (ENSVVUG00000018377) #28 ENSVVUG00000018375 EEFSEC (ENSVVUG00000018372) #29 ENSVVUG00000018366 DNAJB8 (ENSVVUG00000018364) #30 GATA2 (ENSVVUG00000018360) #31 RPN1 (ENSVVUG00000018354) #32 RAB7A (ENSVVUG00000018308) #33 H1-10 (ENSVVUG00000018298) #34 HMCES (ENSVVUG00000018293) #35 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 American mink MODERN SPECIES 147 GDAP2 (ENSNVIG00000017448) WDR3 (ENSNVIG00000017483) SPAG17 (ENSNVIG00000017552) ENSNVIG00000017640 ENSNVIG00000017651 TXNRD3 (ENSNVIG00000017669) #18 CHCH6 (ENSNVIG00000017817) #19 PLXNA1 (ENSNVIG00000017884) #20 TPRA1 (ENSNVIG00000017919) #21 MCM2 (ENSNVIG00000017938) #22 PODXL2 (ENSNVIG00000017970) #23 ABTB1 (ENSNVIG00000018008) #24 MGLL (ENSNVIG00000018064) #25 KBTBD12 (ENSNVIG00000018133) #26 S61A1 (ENSNVIG00000018169) #27 RUVBL1 (ENSNVIG00000018223) #28 EEFSEC (ENSNVIG00000018235) #29 ENSNVIG00000018247 DNAJB8 (ENSNVIG00000018251) #30 GATA2 (ENSNVIG00000018256) #31 RPN1 (ENSNVIG00000018278) #32 ENSNVIG00000018317 #33 ENSNVIG00000018366 H1-10 (ENSNVIG00000018376) #34 HMCES (ENSNVIG00000018380) #35 Ferret MODERN SPECIES 163 KLF15 (ENSMPUG00000017390) #13 CFAP100 (ENSMPUG00000017389) ZXDC (ENSMPUG00000017379) #16 UROC1 (ENSMPUG00000017376) #17 CHST13 (ENSMPUG00000017374) ENSMPUG00000017372 TXNRD3 (ENSMPUG00000017369) #18 CHCHD6 (ENSMPUG00000017366) #19 PLXNA1 (ENSMPUG00000017363) #20 ENSMPUG00000017360 TPRA1 (ENSMPUG00000017359) #21 MCM2 (ENSMPUG00000017353) #22 PODXL2 (ENSMPUG00000017350) #23 ABTB1 (ENSMPUG00000017345) #24 MGLL (ENSMPUG00000017344) #25 KBTBD12 (ENSMPUG00000017343) #26 SEC61A1 (ENSMPUG00000017342) #27 RUVBL1 (ENSMPUG00000017341) #28 EEFSEC (ENSMPUG00000017340) #29 DNAJB8 (ENSMPUG00000017339) #30 GATA2 (ENSMPUG00000017338) #31 ENSMPUG00000017337 RPN1 (ENSMPUG00000017335) #32 RAB7A (ENSMPUG00000017333) #33 HMCES (ENSMPUG00000017327) #35 ENSMPUG00000017316 #36 CNBP (ENSMPUG00000017315) #37 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323.b #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Ursus ANCESTRAL SPECIES 43 ENSGT00940000162801 ENSGT00940000163766 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01010000223084 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323.b #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Polar bear MODERN SPECIES 210 ZNF35 (ENSUMAG00000013450) ZNF197 (ENSUMAG00000013454) ZNF660 (ENSUMAG00000013458) SLC41A3 (ENSUMAG00000013475) #15 ALDH1L1 (ENSUMAG00000013630) #14 KLF15 (ENSUMAG00000013967) #13 ENSUMAG00000013971 ENSUMAG00000013976 #16 UROC1 (ENSUMAG00000013982) #17 ENSUMAG00000014003 TXNRD3 (ENSUMAG00000014041) #18 ENSUMAG00000014342 PLXNA1 (ENSUMAG00000014352) #20 TPRA1 (ENSUMAG00000014378) #21 MCM2 (ENSUMAG00000014421) #22 PODXL2 (ENSUMAG00000014839) #23 ABTB1 (ENSUMAG00000014845) #24 MGLL (ENSUMAG00000014853) #25 KBTBD12 (ENSUMAG00000014859) #26 SEC61A1 (ENSUMAG00000014866) #27 RUVBL1 (ENSUMAG00000014877) #28 EEFSEC (ENSUMAG00000014890) #29 ENSUMAG00000014901 #30 GATA2 (ENSUMAG00000014913) #31 RPN1 (ENSUMAG00000014970) #32 RAB7A (ENSUMAG00000015081) #33 ENSUMAG00000015085 HMCES (ENSUMAG00000015093) #35 COPG1 (ENSUMAG00000015102) #36 ENSUMAG00000015120 #37 American black bear MODERN SPECIES 1838 TPRA1 (ENSUAMG00000021537) #21 MCM2 (ENSUAMG00000021536) #22 PODXL2 (ENSUAMG00000021535) #23 ABTB1 (ENSUAMG00000021534) #24 MGLL (ENSUAMG00000021533) #25 Giant Panda MODERN SPECIES 14 ENSAMEG00000006384 #14 ENSAMEG00000001309 #15 ENSAMEG00000018703 ENSAMEG00000004769 ENSAMEG00000004768 ENSAMEG00000006403 #13 CFAP100 (ENSAMEG00000006408) ZXDC (ENSAMEG00000006438) #16 UROC1 (ENSAMEG00000006448) #17 ENSAMEG00000029947 TXNRD3 (ENSAMEG00000006480) #18 CHCHD6 (ENSAMEG00000026556) #19 PLXNA1 (ENSAMEG00000006541) #20 ENSAMEG00000019709 TPRA1 (ENSAMEG00000014977) #21 MCM2 (ENSAMEG00000014998) #22 PODXL2 (ENSAMEG00000015046) #23 ABTB1 (ENSAMEG00000015059) #24 ENSAMEG00000015086 #25 KBTBD12 (ENSAMEG00000015099) #26 SEC61A1 (ENSAMEG00000015108) #27 RUVBL1 (ENSAMEG00000015136) #28 EEFSEC (ENSAMEG00000015165) #29 ENSAMEG00000028762 DNAJB8 (ENSAMEG00000018919) #30 GATA2 (ENSAMEG00000015180) #31 ENSAMEG00000015201 #32 ENSAMEG00000024109 ENSAMEG00000026307 #34 ENSAMEG00000015269 #35 ENSAMEG00000015249 #33 Felidae ANCESTRAL SPECIES 17 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.w #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Panthera ANCESTRAL SPECIES 1 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.w #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Tiger MODERN SPECIES 564 ALDH1L1 (ENSPTIG00000014274) #14 KLF15 (ENSPTIG00000014256) #13 CFAP100 (ENSPTIG00000014234) ZXDC (ENSPTIG00000014220) #16 UROC1 (ENSPTIG00000014212) #17 C3orf22 (ENSPTIG00000014195) TXNRD3 (ENSPTIG00000014110) #18 CHCHD6 (ENSPTIG00000014085) #19 PLXNA1 (ENSPTIG00000014058) #20 TPRA1 (ENSPTIG00000014035) #21 MCM2 (ENSPTIG00000014022) #22 PODXL2 (ENSPTIG00000014008) #23 ABTB1 (ENSPTIG00000013992) #24 MGLL (ENSPTIG00000013965) #25 KBTBD12 (ENSPTIG00000013942) #26 SEC61A1 (ENSPTIG00000013892) #27 RUVBL1 (ENSPTIG00000013864) #28 EEFSEC (ENSPTIG00000013855) #29 ENSPTIG00000013847 DNAJB8 (ENSPTIG00000009261) #30 GATA2 (ENSPTIG00000013832) #31 RPN1 (ENSPTIG00000013813) #32 Panthera_a ANCESTRAL SPECIES ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.w #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 lion MODERN SPECIES 2 PGAM2 (ENSPLOG00000005255) DBNL (ENSPLOG00000005208) URGCP (ENSPLOG00000005169) MRPS24 (ENSPLOG00000005156) ALDH1L1 (ENSPLOG00000004392) #14 KLF15 (ENSPLOG00000004355) #13 CFAP100 (ENSPLOG00000004337) ZXDC (ENSPLOG00000004315) #16 UROC1 (ENSPLOG00000004294) #17 CHST13 (ENSPLOG00000004278) C3orf22 (ENSPLOG00000004263) TXNRD3 (ENSPLOG00000004215) #18 CHCHD6 (ENSPLOG00000004177) #19 PLXNA1 (ENSPLOG00000004165) #20 TPRA1 (ENSPLOG00000004134) #21 MCM2 (ENSPLOG00000004115) #22 PODXL2 (ENSPLOG00000004100) #23 ABTB1 (ENSPLOG00000004091) #24 MGLL (ENSPLOG00000004066) #25 KBTBD12 (ENSPLOG00000004046) #26 SEC61A1 (ENSPLOG00000004023) #27 RUVBL1 (ENSPLOG00000003920) #28 EEFSEC (ENSPLOG00000003896) #29 ENSPLOG00000003882 DNAJB8 (ENSPLOG00000003879) #30 GATA2 (ENSPLOG00000003865) #31 RPN1 (ENSPLOG00000003850) #32 ENSPLOG00000003821 #33 ENSPLOG00000003798 H1-10 (ENSPLOG00000003787) #34 HMCES (ENSPLOG00000003766) #35 leopard MODERN SPECIES 135 ENSPPRG00000001408 ENSPPRG00000001423 KLF15 (ENSPPRG00000001430) #13 CFAP100 (ENSPPRG00000001466) ZXDC (ENSPPRG00000001552) #16 UROC1 (ENSPPRG00000001664) #17 CHST13 (ENSPPRG00000001750) C3orf22 (ENSPPRG00000001767) TXNRD3 (ENSPPRG00000001957) #18 PLXNA1 (ENSPPRG00000002031) #20 TPRA1 (ENSPPRG00000002097) #21 MCM2 (ENSPPRG00000002132) #22 PODXL2 (ENSPPRG00000002169) #23 ABTB1 (ENSPPRG00000002183) #24 MGLL (ENSPPRG00000002430) #25 KBTBD12 (ENSPPRG00000002619) #26 SEC61A1 (ENSPPRG00000002652) #27 RUVBL1 (ENSPPRG00000002788) #28 ENSPPRG00000002794 #29 EEFSEC (ENSPPRG00000002846) #29 ENSPPRG00000002912 DNAJB8 (ENSPPRG00000011004) #30 GATA2 (ENSPPRG00000002963) #31 RPN1 (ENSPPRG00000003007) #32 ENSPPRG00000003104 #33 ENSPPRG00000011010 H1-10 (ENSPPRG00000011017) #34 Cat MODERN SPECIES 1 AEBP1 (ENSFCAG00000014358) POLM (ENSFCAG00000029004) PGAM2 (ENSFCAG00000023275) DBNL (ENSFCAG00000014355) URGCP (ENSFCAG00000031416) MRPS24 (ENSFCAG00000027947) ENSFCAG00000001776 #14 KLF15 (ENSFCAG00000015732) #13 CFAP100 (ENSFCAG00000015734) ZXDC (ENSFCAG00000015744) #16 UROC1 (ENSFCAG00000015746) #17 CHST13 (ENSFCAG00000032669) ENSFCAG00000049526 TXNRD3 (ENSFCAG00000000974) #18 PLXNA1 (ENSFCAG00000000976) #20 MCM2 (ENSFCAG00000013550) #22 TPRA1 (ENSFCAG00000028259) #21 ABTB1 (ENSFCAG00000013553) #24 MGLL (ENSFCAG00000026204) #25 KBTBD12 (ENSFCAG00000022102) #26 SEC61A1 (ENSFCAG00000008819) #27 RUVBL1 (ENSFCAG00000008821) #28 EEFSEC (ENSFCAG00000006153) #29 ENSFCAG00000045815 DNAJB8 (ENSFCAG00000001739) #30 GATA2 (ENSFCAG00000006154) #31 RPN1 (ENSFCAG00000008222) #32 ENSFCAG00000022971 #33 ENSFCAG00000033094 H1-10 (ENSFCAG00000044498) #34 HMCES (ENSFCAG00000045478) #35 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT00390000018439 #35 Chiroptera ANCESTRAL SPECIES 76 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Microchiroptera ANCESTRAL SPECIES 56 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Greater horseshoe bat MODERN SPECIES 10 ENSRFEG00010009511 SLC41A3 (ENSRFEG00010009372) #15 ALDH1L1 (ENSRFEG00010009061) #14 ENSRFEG00010008962 KLF15 (ENSRFEG00010008935) #13 CFAP100 (ENSRFEG00010008614) ZXDC (ENSRFEG00010008385) #16 UROC1 (ENSRFEG00010008245) #17 CHST13 (ENSRFEG00010008204) ENSRFEG00010008188 TXNRD3 (ENSRFEG00010007252) #18 CHCHD6 (ENSRFEG00010007121) #19 PLXNA1 (ENSRFEG00010007057) #20 ENSRFEG00010007030 TPRA1 (ENSRFEG00010006977) #21 MCM2 (ENSRFEG00010006924) #22 PODXL2 (ENSRFEG00010006876) #23 ENSRFEG00010006843 MGLL (ENSRFEG00010006765) #25 ENSRFEG00010006714 KBTBD12 (ENSRFEG00010006684) #26 SEC61A1 (ENSRFEG00010006596) #27 RUVBL1 (ENSRFEG00010006540) #28 EEFSEC (ENSRFEG00010006458) #29 DNAJB8 (ENSRFEG00010006393) #30 GATA2 (ENSRFEG00010006359) #31 RPN1 (ENSRFEG00010006310) #32 RAB7A (ENSRFEG00010006246) #33 H1-10 (ENSRFEG00010006197) #34 HMCES (ENSRFEG00010006155) #35 COPG1 (ENSRFEG00010006037) #36 Microbat MODERN SPECIES 1027 TPRA1 (ENSMLUG00000007464) #21 MCM2 (ENSMLUG00000017140) #22 PODXL2 (ENSMLUG00000017144) #23 ABTB1 (ENSMLUG00000017150) #24 MGLL (ENSMLUG00000017152) #25 KBTBD12 (ENSMLUG00000001141) #26 SEC61A1 (ENSMLUG00000004248) #27 RUVBL1 (ENSMLUG00000004254) #28 EEFSEC (ENSMLUG00000004261) #29 DNAJB8 (ENSMLUG00000001820) #30 GATA2 (ENSMLUG00000005506) #31 RPN1 (ENSMLUG00000017213) #32 RAB7A (ENSMLUG00000008454) #33 HMCES (ENSMLUG00000010630) #35 COPG1 (ENSMLUG00000012542) #36 CNBP (ENSMLUG00000012554) #37 ENSMLUG00000025147 Megabat MODERN SPECIES 5404 MCM2 (ENSPVAG00000001963) #22 Equus ANCESTRAL SPECIES 5 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00730000111536 #34 ENSGT01090000263326 Donkey MODERN SPECIES 13 ENSEASG00005006151 #15 ALDH1L1 (ENSEASG00005006155) #14 KLF15 (ENSEASG00005006160) #13 CFAP100 (ENSEASG00005006165) ZXDC (ENSEASG00005006173) #16 UROC1 (ENSEASG00005006181) #17 CHST13 (ENSEASG00005006186) TXNRD3 (ENSEASG00005006188) #18 CHCHD6 (ENSEASG00005006190) #19 PLXNA1 (ENSEASG00005006242) #20 ENSEASG00005034594 ENSEASG00005006757 #21 MCM2 (ENSEASG00005006759) #22 PODXL2 (ENSEASG00005006765) #23 ABTB1 (ENSEASG00005006769) #24 MGLL (ENSEASG00005024928) #25 KBTBD12 (ENSEASG00005006776) #26 SEC61A1 (ENSEASG00005006778) #27 RUVBL1 (ENSEASG00005006781) #28 EEFSEC (ENSEASG00005006786) #29 ENSEASG00005006788 ENSEASG00005006791 #30 GATA2 (ENSEASG00005006794) #31 RPN1 (ENSEASG00005006797) #32 ENSEASG00005037828 ENSEASG00005006800 #33 ENSEASG00005034619 #34 ENSEASG00005015815 Horse MODERN SPECIES 7 ENSECAG00000050448 ALDH1L1 (ENSECAG00000021048) #14 KLF15 (ENSECAG00000021092) #13 CFAP100 (ENSECAG00000021105) ZXDC (ENSECAG00000026954) #16 UROC1 (ENSECAG00000021115) #17 CHST13 (ENSECAG00000032529) ENSECAG00000056170 TXNRD3 (ENSECAG00000022090) #18 CHCHD6 (ENSECAG00000000017) #19 PLXNA1 (ENSECAG00000000022) #20 ENSECAG00000043184 ENSECAG00000037753 ENSECAG00000034966 TPRA1 (ENSECAG00000016300) #21 MCM2 (ENSECAG00000019631) #22 PODXL2 (ENSECAG00000008843) #23 ABTB1 (ENSECAG00000012607) #24 MGLL (ENSECAG00000007658) #25 ENSECAG00000059312 KBTBD12 (ENSECAG00000011193) #26 SEC61A1 (ENSECAG00000013475) #27 RUVBL1 (ENSECAG00000000545) #28 EEFSEC (ENSECAG00000016565) #29 DNAJB8 (ENSECAG00000032630) #30 GATA2 (ENSECAG00000016768) #31 RPN1 (ENSECAG00000003030) #32 RAB7A (ENSECAG00000012559) #33 ENSECAG00000048657 H1-10 (ENSECAG00000003332) #34 ENSECAG00000028617 Eulipotyphla ANCESTRAL SPECIES ENSGT01050000244824.F #22 Hedgehog MODERN SPECIES 7078 ENSEEUG00000014799 #22 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Primates ANCESTRAL SPECIES 1 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Haplorrhini ANCESTRAL SPECIES 53 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 Simiiformes ANCESTRAL SPECIES 1 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00910000148072 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00910000147060 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00940000157312 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00910000148072 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00910000147060 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00940000157312 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00910000148072 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00910000147965 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00910000147060 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00910000148072 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00910000147965 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00910000147060 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00520000059425 Pan ANCESTRAL SPECIES 2 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00910000148072 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00910000147965 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00910000147060 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00520000059425 ENSGT00390000007704 Chimpanzee MODERN SPECIES 16 KLF15 (ENSPTRG00000015329) #13 CFAP100 (ENSPTRG00000015330) ZXDC (ENSPTRG00000015332) #16 ENSPTRG00000052072 UROC1 (ENSPTRG00000015334) #17 CHST13 (ENSPTRG00000015335) C3H3orf22 (ENSPTRG00000015337) ENSPTRG00000042250 TXNRD3 (ENSPTRG00000015338) #18 CHCHD6 (ENSPTRG00000015340) #19 PLXNA1 (ENSPTRG00000015341) #20 PRR23E (ENSPTRG00000048073) PRR20G (ENSPTRG00000045213) ENSPTRG00000044306 TPRA1 (ENSPTRG00000015344) #21 MCM2 (ENSPTRG00000015345) #22 PODXL2 (ENSPTRG00000015346) #23 ABTB1 (ENSPTRG00000015347) #24 MGLL (ENSPTRG00000015348) #25 ENSPTRG00000049260 KBTBD12 (ENSPTRG00000015350) #26 SEC61A1 (ENSPTRG00000015351) #27 RUVBL1 (ENSPTRG00000015352) #28 EEFSEC (ENSPTRG00000015353) #29 ENSPTRG00000047855 DNAJB8 (ENSPTRG00000030133) #30 GATA2 (ENSPTRG00000015355) #31 ENSPTRG00000015356 RPN1 (ENSPTRG00000015358) #32 ENSPTRG00000052721 RAB7A (ENSPTRG00000015359) Bonobo MODERN SPECIES 16 ENSPPAG00000040701 #16 ENSPPAG00000039621 UROC1 (ENSPPAG00000042107) #17 CHST13 (ENSPPAG00000037247) C3orf22 (ENSPPAG00000041480) ENSPPAG00000027916 TXNRD3 (ENSPPAG00000039160) #18 ENSPPAG00000039882 ENSPPAG00000042983 PLXNA1 (ENSPPAG00000043571) #20 PRR23E (ENSPPAG00000025709) PRR20G (ENSPPAG00000037173) ENSPPAG00000037957 ENSPPAG00000002927 TPRA1 (ENSPPAG00000027470) #21 MCM2 (ENSPPAG00000007554) #22 PODXL2 (ENSPPAG00000026149) #23 ABTB1 (ENSPPAG00000029212) #24 MGLL (ENSPPAG00000042233) #25 ENSPPAG00000039348 KBTBD12 (ENSPPAG00000042786) #26 SEC61A1 (ENSPPAG00000019985) #27 RUVBL1 (ENSPPAG00000040102) #28 EEFSEC (ENSPPAG00000030936) #29 ENSPPAG00000032736 DNAJB8 (ENSPPAG00000007556) #30 GATA2 (ENSPPAG00000027745) #31 ENSPPAG00000017566 RPN1 (ENSPPAG00000026160) #32 ENSPPAG00000036440 ENSPPAG00000030098 Human MODERN SPECIES 15 ROPN1B (ENSG00000114547) SLC41A3 (ENSG00000114544) #15 ALDH1L1 (ENSG00000144908) #14 KLF15 (ENSG00000163884) #13 CFAP100 (ENSG00000163885) ZXDC (ENSG00000070476) #16 UROC1 (ENSG00000159650) #17 CHST13 (ENSG00000180767) C3orf22 (ENSG00000180697) TXNRD3 (ENSG00000197763) #18 CHCHD6 (ENSG00000159685) #19 PLXNA1 (ENSG00000114554) #20 PRR23E (ENSG00000214324) PRR20G (ENSG00000239620) TPRA1 (ENSG00000163870) #21 MCM2 (ENSG00000073111) #22 PODXL2 (ENSG00000114631) #23 ABTB1 (ENSG00000114626) #24 MGLL (ENSG00000074416) #25 KBTBD12 (ENSG00000187715) #26 SEC61A1 (ENSG00000058262) #27 RUVBL1 (ENSG00000175792) #28 EEFSEC (ENSG00000132394) #29 DNAJB8 (ENSG00000179407) #30 GATA2 (ENSG00000179348) #31 RPN1 (ENSG00000163902) #32 RAB7A (ENSG00000075785) #33 ACAD9 (ENSG00000177646) CFAP92 (ENSG00000114656) EFCC1 (ENSG00000114654) GP9 (ENSG00000169704) Gorilla MODERN SPECIES 16 ALDH1L1 (ENSGGOG00000004772) #14 KLF15 (ENSGGOG00000009916) #13 CFAP100 (ENSGGOG00000009922) ZXDC (ENSGGOG00000009938) #16 UROC1 (ENSGGOG00000013993) #17 CHST13 (ENSGGOG00000014010) C3orf22 (ENSGGOG00000014017) ENSGGOG00000025139 TXNRD3 (ENSGGOG00000005318) #18 CHCHD6 (ENSGGOG00000009066) #19 PLXNA1 (ENSGGOG00000000847) #20 PRR23E (ENSGGOG00000040736) PRR20G (ENSGGOG00000025848) ENSGGOG00000037140 TPRA1 (ENSGGOG00000010008) #21 MCM2 (ENSGGOG00000014866) #22 PODXL2 (ENSGGOG00000000176) #23 ABTB1 (ENSGGOG00000000177) #24 MGLL (ENSGGOG00000000179) #25 ENSGGOG00000044048 KBTBD12 (ENSGGOG00000025759) #26 SEC61A1 (ENSGGOG00000010507) #27 RUVBL1 (ENSGGOG00000010520) #28 EEFSEC (ENSGGOG00000001445) #29 ENSGGOG00000038952 DNAJB8 (ENSGGOG00000038485) #30 GATA2 (ENSGGOG00000006156) #31 ENSGGOG00000005125 RPN1 (ENSGGOG00000013966) #32 RAB7A (ENSGGOG00000005557) #33 ENSGGOG00000026638 Orangutan MODERN SPECIES 16 ROPN1B (ENSPPYG00000013469) SLC41A3 (ENSPPYG00000013457) #15 ALDH1L1 (ENSPPYG00000013456) #14 KLF15 (ENSPPYG00000013455) #13 CFAP100 (ENSPPYG00000013454) ZXDC (ENSPPYG00000013453) #16 UROC1 (ENSPPYG00000013452) #17 CHST13 (ENSPPYG00000013451) C3orf22 (ENSPPYG00000013450) TXNRD3 (ENSPPYG00000013449) #18 CHCHD6 (ENSPPYG00000013447) #19 PLXNA1 (ENSPPYG00000013446) #20 PRR23E (ENSPPYG00000013445) PRR20G (ENSPPYG00000031249) ENSPPYG00000013444 #21 MCM2 (ENSPPYG00000013443) #22 PODXL2 (ENSPPYG00000013442) #23 ABTB1 (ENSPPYG00000013441) #24 MGLL (ENSPPYG00000013440) #25 KBTBD12 (ENSPPYG00000037884) #26 SEC61A1 (ENSPPYG00000013438) #27 RUVBL1 (ENSPPYG00000013437) #28 EEFSEC (ENSPPYG00000013436) #29 DNAJB8 (ENSPPYG00000013435) #30 GATA2 (ENSPPYG00000013434) #31 RPN1 (ENSPPYG00000013432) #32 ENSPPYG00000013430 RAB7A (ENSPPYG00000013431) #33 ENSPPYG00000039972 ACAD9 (ENSPPYG00000013429) CFAP92 (ENSPPYG00000013428) Gibbon MODERN SPECIES 13 SLC41A3 (ENSNLEG00000000891) #15 ALDH1L1 (ENSNLEG00000000948) #14 KLF15 (ENSNLEG00000028904) #13 CFAP100 (ENSNLEG00000001053) ZXDC (ENSNLEG00000001066) #16 ENSNLEG00000036223 UROC1 (ENSNLEG00000001076) #17 ENSNLEG00000001080 C3orf22 (ENSNLEG00000001083) ENSNLEG00000001088 TXNRD3 (ENSNLEG00000001090) #18 ENSNLEG00000029654 PLXNA1 (ENSNLEG00000001109) #20 PRR23E (ENSNLEG00000018671) TPRA1 (ENSNLEG00000014115) #21 ENSNLEG00000014125 #22 PODXL2 (ENSNLEG00000014142) #23 ABTB1 (ENSNLEG00000033739) #24 MGLL (ENSNLEG00000014200) #25 KBTBD12 (ENSNLEG00000014254) #26 SEC61A1 (ENSNLEG00000014258) #27 RUVBL1 (ENSNLEG00000014205) #28 EEFSEC (ENSNLEG00000014303) #29 ENSNLEG00000030486 DNAJB8 (ENSNLEG00000019296) #30 GATA2 (ENSNLEG00000014320) #31 ENSNLEG00000014335 ENSNLEG00000014336 ENSNLEG00000031100 RPN1 (ENSNLEG00000014337) #32 RAB7A (ENSNLEG00000029309) #33 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00910000147060 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 Macaca ANCESTRAL SPECIES 5 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00910000147060 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 Pig-tailed macaque MODERN SPECIES 546 PRR23E (ENSMNEG00000040938) ENSMNEG00000032232 TPRA1 (ENSMNEG00000030541) #21 MCM2 (ENSMNEG00000034425) #22 PODXL2 (ENSMNEG00000035933) #23 ABTB1 (ENSMNEG00000045566) #24 MGLL (ENSMNEG00000038846) #25 KBTBD12 (ENSMNEG00000031241) #26 SEC61A1 (ENSMNEG00000001390) #27 RUVBL1 (ENSMNEG00000030256) #28 ENSMNEG00000023174 EEFSEC (ENSMNEG00000028574) #29 DNAJB8 (ENSMNEG00000011913) #30 GATA2 (ENSMNEG00000029290) #31 ENSMNEG00000030117 RPN1 (ENSMNEG00000023826) #32 ENSMNEG00000040171 ENSMNEG00000014307 RAB7A (ENSMNEG00000033473) #33 Macaca_a ANCESTRAL SPECIES 5 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000161627.a.b.b.a.b.b.b Rhesus MODERN SPECIES 11 ENSMMUG00000056933 SLC41A3 (ENSMMUG00000012847) #15 ALDH1L1 (ENSMMUG00000012488) #14 KLF15 (ENSMMUG00000003721) #13 CFAP100 (ENSMMUG00000004192) ZXDC (ENSMMUG00000004195) #16 UROC1 (ENSMMUG00000004197) #17 CHST13 (ENSMMUG00000004201) C2H3orf22 (ENSMMUG00000004203) TXNRD3 (ENSMMUG00000001714) #18 CHCHD6 (ENSMMUG00000016719) #19 PLXNA1 (ENSMMUG00000016720) #20 PRR20G (ENSMMUG00000050488) ENSMMUG00000055664 TPRA1 (ENSMMUG00000000756) #21 MCM2 (ENSMMUG00000000158) #22 PODXL2 (ENSMMUG00000000164) #23 ABTB1 (ENSMMUG00000000166) #24 ENSMMUG00000056821 MGLL (ENSMMUG00000000168) #25 KBTBD12 (ENSMMUG00000046638) #26 SEC61A1 (ENSMMUG00000018661) #27 RUVBL1 (ENSMMUG00000018662) #28 EEFSEC (ENSMMUG00000018663) #29 GATA2 (ENSMMUG00000021371) #31 RPN1 (ENSMMUG00000018321) #32 ENSMMUG00000020716 RAB7A (ENSMMUG00000001798) #33 ACAD9 (ENSMMUG00000006338) CFAP92 (ENSMMUG00000006343) EFCC1 (ENSMMUG00000047061) Crab-eating macaque MODERN SPECIES 11 ENSMFAG00000040261 SLC41A3 (ENSMFAG00000003568) #15 ALDH1L1 (ENSMFAG00000039810) #14 KLF15 (ENSMFAG00000002550) #13 CFAP100 (ENSMFAG00000042548) ZXDC (ENSMFAG00000035930) #16 UROC1 (ENSMFAG00000042232) #17 C3orf22 (ENSMFAG00000032848) ENSMFAG00000003422 TXNRD3 (ENSMFAG00000001280) #18 CHCHD6 (ENSMFAG00000006791) #19 PLXNA1 (ENSMFAG00000037368) #20 PRR20G (ENSMFAG00000056785) ENSMFAG00000041353 TPRA1 (ENSMFAG00000038337) #21 MCM2 (ENSMFAG00000021368) #22 PODXL2 (ENSMFAG00000003876) #23 ABTB1 (ENSMFAG00000033156) #24 MGLL (ENSMFAG00000033079) #25 KBTBD12 (ENSMFAG00000007505) #26 SEC61A1 (ENSMFAG00000043634) #27 RUVBL1 (ENSMFAG00000003301) #28 EEFSEC (ENSMFAG00000042128) #29 DNAJB8 (ENSMFAG00000030291) #30 GATA2 (ENSMFAG00000038603) #31 RPN1 (ENSMFAG00000003642) #32 ENSMFAG00000031120 ENSMFAG00000054493 RAB7A (ENSMFAG00000050771) #33 ENSMFAG00000057913 ACAD9 (ENSMFAG00000045035) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00530000068689 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00390000007772.b.b ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00910000147060 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 Olive baboon MODERN SPECIES 11 OSBPL11 (ENSPANG00000018912) ENSPANG00000043961 SLC41A3 (ENSPANG00000021689) #15 ALDH1L1 (ENSPANG00000021688) #14 KLF15 (ENSPANG00000026096) #13 CFAP100 (ENSPANG00000000432) ZXDC (ENSPANG00000000433) #16 UROC1 (ENSPANG00000023053) #17 CHST13 (ENSPANG00000023284) C3orf22 (ENSPANG00000025524) ENSPANG00000008761 TXNRD3 (ENSPANG00000000735) #18 PLXNA1 (ENSPANG00000009644) #20 PRR20G (ENSPANG00000050712) TPRA1 (ENSPANG00000000387) #21 MCM2 (ENSPANG00000000386) #22 PODXL2 (ENSPANG00000004125) #23 ABTB1 (ENSPANG00000020391) #24 MGLL (ENSPANG00000018817) #25 KBTBD12 (ENSPANG00000006163) #26 SEC61A1 (ENSPANG00000012256) #27 RUVBL1 (ENSPANG00000004174) #28 ENSPANG00000048574 EEFSEC (ENSPANG00000017041) #29 DNAJB8 (ENSPANG00000001041) #30 GATA2 (ENSPANG00000005346) #31 ENSPANG00000024411 RPN1 (ENSPANG00000007909) #32 ENSPANG00000041869 RAB7A (ENSPANG00000031173) #33 ENSPANG00000033246 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00390000007772.b.b ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c #27 ENSGT00940000153556.A #28 ENSGT00910000147060 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 Sooty mangabey MODERN SPECIES 650 PRR23E (ENSCATG00000015144) ENSCATG00000029668 TPRA1 (ENSCATG00000030415) #21 MCM2 (ENSCATG00000029562) #22 PODXL2 (ENSCATG00000038361) #23 ABTB1 (ENSCATG00000029268) #24 MGLL (ENSCATG00000034929) #25 KBTBD12 (ENSCATG00000033209) #26 SEC61A1 (ENSCATG00000030097) #27 RUVBL1 (ENSCATG00000030520) #28 ENSCATG00000005753 EEFSEC (ENSCATG00000019414) #29 DNAJB8 (ENSCATG00000000460) #30 GATA2 (ENSCATG00000017111) #31 ENSCATG00000000229 RPN1 (ENSCATG00000037161) #32 ENSCATG00000001293 ENSCATG00000041773 ENSCATG00000037989 Drill MODERN SPECIES 264 MITF (ENSMLEG00000039415) ENSMLEG00000034644 MDFIC2 (ENSMLEG00000007420) FOXP1 (ENSMLEG00000037250) ENSMLEG00000038551 ENSMLEG00000010756 PROK2 (ENSMLEG00000030120) ENSMLEG00000037986 RYBP (ENSMLEG00000038150) SHQ1 (ENSMLEG00000038493) GXYLT2 (ENSMLEG00000000099) PPP4R2 (ENSMLEG00000040160) PRR23E (ENSMLEG00000030492) ENSMLEG00000026183 TPRA1 (ENSMLEG00000034167) #21 MCM2 (ENSMLEG00000038079) #22 PODXL2 (ENSMLEG00000021945) #23 ABTB1 (ENSMLEG00000043506) #24 MGLL (ENSMLEG00000038697) #25 KBTBD12 (ENSMLEG00000032213) #26 SEC61A1 (ENSMLEG00000032430) #27 RUVBL1 (ENSMLEG00000038540) #28 ENSMLEG00000044016 EEFSEC (ENSMLEG00000041771) #29 DNAJB8 (ENSMLEG00000014589) #30 GATA2 (ENSMLEG00000041394) #31 ENSMLEG00000027936 RPN1 (ENSMLEG00000030689) #32 Vervet Monkey MODERN SPECIES 14 ENSCSAG00000008002 SLC41A3 (ENSCSAG00000008006) #15 ALDH1L1 (ENSCSAG00000008021) #14 ENSCSAG00000008030 KLF15 (ENSCSAG00000008037) #13 CFAP100 (ENSCSAG00000008048) ZXDC (ENSCSAG00000008075) #16 UROC1 (ENSCSAG00000008092) #17 CHST13 (ENSCSAG00000008104) C3orf22 (ENSCSAG00000008113) TXNRD3 (ENSCSAG00000008126) #18 CHCHD6 (ENSCSAG00000008135) #19 PLXNA1 (ENSCSAG00000008326) #20 PRR20G (ENSCSAG00000008436) TPRA1 (ENSCSAG00000008452) #21 MCM2 (ENSCSAG00000008462) #22 PODXL2 (ENSCSAG00000008474) #23 ABTB1 (ENSCSAG00000008534) #24 MGLL (ENSCSAG00000008560) #25 KBTBD12 (ENSCSAG00000008568) #26 ENSCSAG00000018715 SEC61A1 (ENSCSAG00000008579) #27 RUVBL1 (ENSCSAG00000008592) #28 EEFSEC (ENSCSAG00000008599) #29 DNAJB8 (ENSCSAG00000018813) #30 GATA2 (ENSCSAG00000008607) #31 RPN1 (ENSCSAG00000008622) #32 RAB7A (ENSCSAG00000008628) #33 ACAD9 (ENSCSAG00000008707) CFAP92 (ENSCSAG00000008754) EFCC1 (ENSCSAG00000008762) Rhinopithecus ANCESTRAL SPECIES 35 ENSGT00390000001542.a ENSGT00910000147012 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.c.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170.n #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000003087 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 Black snub-nosed monkey MODERN SPECIES 772 PRR23E (ENSRBIG00000031852) ENSRBIG00000013923 PRR20G (ENSRBIG00000035864) ENSRBIG00000029763 TPRA1 (ENSRBIG00000021517) #21 MCM2 (ENSRBIG00000034363) #22 PODXL2 (ENSRBIG00000035462) #23 ABTB1 (ENSRBIG00000034937) #24 MGLL (ENSRBIG00000041834) #25 KBTBD12 (ENSRBIG00000030050) #26 ENSRBIG00000031893 #27 ENSRBIG00000008581 RUVBL1 (ENSRBIG00000033313) #28 EEFSEC (ENSRBIG00000032635) #29 DNAJB8 (ENSRBIG00000005878) #30 GATA2 (ENSRBIG00000038834) #31 ENSRBIG00000042871 RPN1 (ENSRBIG00000044116) #32 RAB7A (ENSRBIG00000034869) #33 ENSRBIG00000025725 ENSRBIG00000043768 Golden snub-nosed monkey MODERN SPECIES 3112 TPRA1 (ENSRROG00000036317) #21 MCM2 (ENSRROG00000042335) #22 PODXL2 (ENSRROG00000039279) #23 ABTB1 (ENSRROG00000037425) #24 MGLL (ENSRROG00000042663) #25 KBTBD12 (ENSRROG00000042733) #26 ENSRROG00000044217 #27 RUVBL1 (ENSRROG00000037342) #28 ENSRROG00000030260 #29 Platyrrhini ANCESTRAL SPECIES 37 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000153786.e.a.a ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00390000016807 #21 ENSGT01050000244824.F #22 Cebidae ANCESTRAL SPECIES 35 ENSGT00940000160913 #14 ENSGT00940000153786.e.a.a ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT01030000237923 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00390000016807 #21 ENSGT01050000244824.F #22 Marmoset MODERN SPECIES 6 ALDH1L1 (ENSCJAG00000006865) #14 KLF15 (ENSCJAG00000006941) #13 CFAP100 (ENSCJAG00000006945) ZXDC (ENSCJAG00000006974) #16 UROC1 (ENSCJAG00000034319) #17 CHST13 (ENSCJAG00000077604) C3orf22 (ENSCJAG00000011278) TXNRD3 (ENSCJAG00000011289) #18 ENSCJAG00000064210 CHCHD6 (ENSCJAG00000011355) #19 PLXNA1 (ENSCJAG00000011377) #20 ENSCJAG00000072844 ENSCJAG00000022924 PRR20G (ENSCJAG00000041034) TPRA1 (ENSCJAG00000008960) #21 MCM2 (ENSCJAG00000008943) #22 TASOR (ENSCJAG00000010847) CCDC66 (ENSCJAG00000010819) ARHGEF3 (ENSCJAG00000010916) IL17RD (ENSCJAG00000010960) HESX1 (ENSCJAG00000048644) APPL1 (ENSCJAG00000010992) ENSCJAG00000064733 PODXL2 (ENSCJAG00000005226) #23 MGLL (ENSCJAG00000005274) #25 ENSCJAG00000076823 KBTBD12 (ENSCJAG00000005305) #26 SEC61A1 (ENSCJAG00000005358) #27 RUVBL1 (ENSCJAG00000005310) #28 EEFSEC (ENSCJAG00000005387) #29 DNAJB8 (ENSCJAG00000046212) #30 Cebidae_a ANCESTRAL SPECIES 125 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000153786.e.a.a ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT01030000237923 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000001542.a ENSGT00390000016807 #21 ENSGT01050000244824.F #22 Capuchin MODERN SPECIES 376 ZDHHC9 (ENSCCAG00000021201) ENSCCAG00000019807 UTP14A (ENSCCAG00000035074) BCORL1 (ENSCCAG00000018301) ELF4 (ENSCCAG00000024590) AIFM1 (ENSCCAG00000032951) RAB33A (ENSCCAG00000035680) ZNF280C (ENSCCAG00000023882) SLC25A14 (ENSCCAG00000022512) ENSCCAG00000026471 ENOX2 (ENSCCAG00000029178) ARHGAP36 (ENSCCAG00000025663) IGSF1 (ENSCCAG00000027315) PRR20G (ENSCCAG00000020972) TPRA1 (ENSCCAG00000029851) #21 MCM2 (ENSCCAG00000015881) #22 Bolivian squirrel monkey MODERN SPECIES 243 ALDH1L1 (ENSSBOG00000028007) #14 ENSSBOG00000025614 ENSSBOG00000025109 KLF15 (ENSSBOG00000021553) #13 CFAP100 (ENSSBOG00000019567) ZXDC (ENSSBOG00000007246) #16 UROC1 (ENSSBOG00000032280) #17 CHST13 (ENSSBOG00000026575) C3orf22 (ENSSBOG00000020324) TXNRD3 (ENSSBOG00000018547) #18 ENSSBOG00000036344 CHCHD6 (ENSSBOG00000021537) #19 PLXNA1 (ENSSBOG00000011978) #20 PRR20G (ENSSBOG00000027200) TPRA1 (ENSSBOG00000023805) #21 MCM2 (ENSSBOG00000025944) #22 Mas night monkey MODERN SPECIES 1130 ALDH1L1 (ENSANAG00000035887) #14 ENSANAG00000020848 KLF15 (ENSANAG00000029612) #13 CFAP100 (ENSANAG00000036664) ZXDC (ENSANAG00000030993) #16 UROC1 (ENSANAG00000037510) #17 CHST13 (ENSANAG00000011064) C3orf22 (ENSANAG00000036080) TXNRD3 (ENSANAG00000034426) #18 CHCHD6 (ENSANAG00000018993) #19 PLXNA1 (ENSANAG00000035335) #20 PRR23E (ENSANAG00000030576) ENSANAG00000028555 ENSANAG00000019489 TPRA1 (ENSANAG00000035830) #21 MCM2 (ENSANAG00000017116) #22 Tarsier MODERN SPECIES 4147 ENSTSYG00000036818 TPRA1 (ENSTSYG00000029988) #21 MCM2 (ENSTSYG00000006266) #22 PODXL2 (ENSTSYG00000033888) #23 ABTB1 (ENSTSYG00000006434) #24 MGLL (ENSTSYG00000007017) #25 KBTBD12 (ENSTSYG00000005316) #26 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Lemuriformes ANCESTRAL SPECIES 115 ENSGT01050000244850.A.b #20 ENSGT00390000001542 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 Mouse lemur MODERN SPECIES 14 ENSMICG00000032573 CEACAM18 (ENSMICG00000028128) ENSMICG00000035756 ENSMICG00000041738 ENSMICG00000037445 #28 SEC61A1 (ENSMICG00000038735) #27 ENSMICG00000044805 ENSMICG00000032361 ENSMICG00000042999 #14 ENSMICG00000005257 #30 ENSMICG00000044831 UROC1 (ENSMICG00000042477) #17 ENSMICG00000047409 #20 ENSMICG00000027993 #20 TPRA1 (ENSMICG00000046251) #21 MCM2 (ENSMICG00000033923) #22 MGLL (ENSMICG00000031034) #25 ABTB1 (ENSMICG00000031555) #24 GATA2 (ENSMICG00000047775) #31 ENSMICG00000044691 #32 ENSMICG00000038752 #33 H1-10 (ENSMICG00000040699) #34 ENSMICG00000046001 ##33 ENSMICG00000042693 #35 COPG1 (ENSMICG00000047416) #36 CNBP (ENSMICG00000045988) #37 ISY1 (ENSMICG00000037547) GP9 (ENSMICG00000047442) TRH (ENSMICG00000030353) ENSMICG00000043734 MRPS25 (ENSMICG00000040033) Lemuriformes_a ANCESTRAL SPECIES 288 ENSGT00390000001542 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 Coquerels sifaka MODERN SPECIES 924 ENSPCOG00000019263 #21 MCM2 (ENSPCOG00000017456) #22 Greater bamboo lemur MODERN SPECIES 397 ENSPSMG00000005138 TPRA1 (ENSPSMG00000005120) #21 MCM2 (ENSPSMG00000005099) #22 PODXL2 (ENSPSMG00000005065) #23 Bushbaby MODERN SPECIES 216 ENSOGAG00000004411 #15 ALDH1L1 (ENSOGAG00000004413) #14 KLF15 (ENSOGAG00000000703) #13 CFAP100 (ENSOGAG00000000704) ZXDC (ENSOGAG00000028511) #16 UROC1 (ENSOGAG00000000708) #17 CHST13 (ENSOGAG00000024767) TXNRD3 (ENSOGAG00000004878) #18 PLXNA1 (ENSOGAG00000005328) #20 TPRA1 (ENSOGAG00000010093) #21 MCM2 (ENSOGAG00000010099) #22 PODXL2 (ENSOGAG00000010107) #23 ABTB1 (ENSOGAG00000008864) #24 MGLL (ENSOGAG00000005556) #25 KBTBD12 (ENSOGAG00000029042) #26 SEC61A1 (ENSOGAG00000014076) #27 RUVBL1 (ENSOGAG00000014081) #28 EEFSEC (ENSOGAG00000014084) #29 DNAJB8 (ENSOGAG00000014090) #30 GATA2 (ENSOGAG00000013538) #31 ENSOGAG00000029608 ENSOGAG00000000915 #32 RAB7A (ENSOGAG00000007885) #33 H1-10 (ENSOGAG00000024640) #34 HMCES (ENSOGAG00000011392) #35 COPG1 (ENSOGAG00000011386) #36 Euarchontoglires_A ANCESTRAL SPECIES 30 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Glires ANCESTRAL SPECIES 2 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Lagomorpha ANCESTRAL SPECIES 104 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00990000205522 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 ENSGT00390000014109 Rabbit MODERN SPECIES 20 IQSEC1 (ENSOCUG00000001343) ENSOCUG00000037996 ENSOCUG00000030059 SLC41A3 (ENSOCUG00000008996) #15 ALDH1L1 (ENSOCUG00000015071) #14 KLF15 (ENSOCUG00000012493) #13 ENSOCUG00000039308 ENSOCUG00000012500 ZXDC (ENSOCUG00000022942) #16 UROC1 (ENSOCUG00000012624) #17 CHST13 (ENSOCUG00000025359) TXNRD3 (ENSOCUG00000008949) #18 CHCHD6 (ENSOCUG00000008144) #19 PLXNA1 (ENSOCUG00000003662) #20 TPRA1 (ENSOCUG00000027115) #21 MCM2 (ENSOCUG00000015924) #22 PODXL2 (ENSOCUG00000014460) #23 ABTB1 (ENSOCUG00000027274) #24 ENSOCUG00000036497 KBTBD12 (ENSOCUG00000016494) #26 SEC61A1 (ENSOCUG00000016501) #27 RUVBL1 (ENSOCUG00000016510) #28 EEFSEC (ENSOCUG00000016517) #29 DNAJB8 (ENSOCUG00000026352) #30 ENSOCUG00000037243 RPN1 (ENSOCUG00000008171) #32 ENSOCUG00000001645 #33 HMCES (ENSOCUG00000005983) #35 COPG1 (ENSOCUG00000005970) #36 ENSOCUG00000009170 ENSOCUG00000008696 #37 Pika MODERN SPECIES 3334 ENSOPRG00000012915 #22 ENSOPRG00000012933 #24 ENSOPRG00000012956 #25 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Muroidea ANCESTRAL SPECIES 37 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Cricetidae ANCESTRAL SPECIES 3 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Chinese hamster chok1gshd MODERN SPECIES 335 ENSCGRG00001019857 Tpra1 (ENSCGRG00001001126) #21 Mcm2 (ENSCGRG00001010056) #22 Podxl2 (ENSCGRG00001010445) #23 Abtb1 (ENSCGRG00001011986) #24 Mgll (ENSCGRG00001012642) #25 Kbtbd12 (ENSCGRG00001015928) #26 Sec61a1 (ENSCGRG00001016511) #27 Ruvbl1 (ENSCGRG00001017058) #28 Eefsec (ENSCGRG00001018089) #29 ENSCGRG00001019550 Dnajb8 (ENSCGRG00001014725) #30 Gata2 (ENSCGRG00001019672) #31 Rpn1 (ENSCGRG00001020104) #32 Rab7 (ENSCGRG00001021807) #33 H1f10 (ENSCGRG00001016043) #34 Hmces (ENSCGRG00001021867) #35 Copg1 (ENSCGRG00001023044) #36 Golden Hamster MODERN SPECIES 643 Iqsec1 (ENSMAUG00000005597) Slc41a3 (ENSMAUG00000015587) #15 ENSMAUG00000014077 Klf15 (ENSMAUG00000005299) #13 Cfap100 (ENSMAUG00000018814) Zxdc (ENSMAUG00000019913) #16 Uroc1 (ENSMAUG00000003968) #17 Chst13 (ENSMAUG00000021792) BC048671 (ENSMAUG00000020215) ENSMAUG00000000996 Txnrd3 (ENSMAUG00000012587) #18 ENSMAUG00000010425 Plxna1 (ENSMAUG00000014014) #20 ENSMAUG00000017592 Tpra1 (ENSMAUG00000012903) #21 Mcm2 (ENSMAUG00000008722) #22 Podxl2 (ENSMAUG00000014710) #23 Abtb1 (ENSMAUG00000008631) #24 Mgll (ENSMAUG00000006292) #25 Kbtbd12 (ENSMAUG00000017044) #26 Sec61a1 (ENSMAUG00000003472) #27 Ruvbl1 (ENSMAUG00000001153) #28 Eefsec (ENSMAUG00000011197) #29 ENSMAUG00000021823 Dnajb8 (ENSMAUG00000009689) #30 Gata2 (ENSMAUG00000007355) #31 Rpn1 (ENSMAUG00000022244) #32 H1f10 (ENSMAUG00000010028) #34 Hmces (ENSMAUG00000007703) #35 ENSMAUG00000011845 #37 Isy1 (ENSMAUG00000008793) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Northern American deer mouse MODERN SPECIES 16 Anxa4 (ENSPEMG00000016652) Gmcl1 (ENSPEMG00000013985) ENSPEMG00000007464 Mxd1 (ENSPEMG00000024578) Asprv1 (ENSPEMG00000018734) Pcbp1 (ENSPEMG00000027674) C87436 (ENSPEMG00000010949) Tia1 (ENSPEMG00000001090) Pcyox1 (ENSPEMG00000016789) ENSPEMG00000014690 Fam136a (ENSPEMG00000017963) Tgfa (ENSPEMG00000018354) Add2 (ENSPEMG00000011378) Figla (ENSPEMG00000008503) Tpra1 (ENSPEMG00000013729) #21 Mcm2 (ENSPEMG00000017914) #22 Podxl2 (ENSPEMG00000012840) #23 Abtb1 (ENSPEMG00000010428) #24 Plxna1 (ENSPEMG00000021607) #20 Chchd6 (ENSPEMG00000000380) #19 Txnrd3 (ENSPEMG00000001160) #18 ENSPEMG00000024949 ENSPEMG00000026739 ENSPEMG00000027915 BC048671 (ENSPEMG00000021675) Chst13 (ENSPEMG00000021441) Uroc1 (ENSPEMG00000023009) #17 Zxdc (ENSPEMG00000023131) #16 Cfap100 (ENSPEMG00000007650) Klf15 (ENSPEMG00000023025) #13 Aldh1l1 (ENSPEMG00000004481) #14 Prairie vole MODERN SPECIES 84 Aldh1l1 (ENSMOCG00000003909) #14 Klf15 (ENSMOCG00000022079) #13 Cfap100 (ENSMOCG00000021845) Zxdc (ENSMOCG00000017021) #16 Uroc1 (ENSMOCG00000004244) #17 Chst13 (ENSMOCG00000002222) BC048671 (ENSMOCG00000016274) ENSMOCG00000014528 ENSMOCG00000018983 ENSMOCG00000019875 Txnrd3 (ENSMOCG00000012893) #18 ENSMOCG00000002972 Chchd6 (ENSMOCG00000014679) #19 Plxna1 (ENSMOCG00000007977) #20 Tpra1 (ENSMOCG00000015000) #21 Mcm2 (ENSMOCG00000002693) #22 Podxl2 (ENSMOCG00000012699) #23 Abtb1 (ENSMOCG00000001980) #24 Mgll (ENSMOCG00000000279) #25 Kbtbd12 (ENSMOCG00000010634) #26 Sec61a1 (ENSMOCG00000012823) #27 Ruvbl1 (ENSMOCG00000020711) #28 Eefsec (ENSMOCG00000017748) #29 ENSMOCG00000013516 Dnajb8 (ENSMOCG00000009527) #30 Gata2 (ENSMOCG00000010158) #31 Rpn1 (ENSMOCG00000019555) #32 ENSMOCG00000002760 #33 Hmces (ENSMOCG00000016378) #35 Copg1 (ENSMOCG00000004622) #36 Cnbp (ENSMOCG00000002044) #37 Murinae ANCESTRAL SPECIES 4 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Mus ANCESTRAL SPECIES 12 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00860000136124 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Mus_A ANCESTRAL SPECIES 7 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT01030000234553.b.b.d.c.b.a.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00860000136124 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.g.a #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Mus_B ANCESTRAL SPECIES 15 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.b.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.b.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.b ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00860000136124 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.g.a #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Mus_C ANCESTRAL SPECIES 18 ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.b.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.b.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.a ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.b ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.a ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00860000136124 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A.g.a #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00900000143259 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.s #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Steppe mouse MODERN SPECIES 3245 ENSMSIG00000013044 ENSMSIG00000013052 Tpra1 (ENSMSIG00000013070) #21 Mcm2 (ENSMSIG00000013116) #22 Podxl2 (ENSMSIG00000013198) #23 ENSMSIG00000013222 Abtb1 (ENSMSIG00000013235) #24 Mgll (ENSMSIG00000013258) #25 Kbtbd12 (ENSMSIG00000013327) #26 Sec61a1 (ENSMSIG00000013368) #27 Ruvbl1 (ENSMSIG00000013395) #28 Eefsec (ENSMSIG00000013446) #29 Dnajb8 (ENSMSIG00000013500) #30 ENSMSIG00000013506 Gata2 (ENSMSIG00000013519) #31 Rpn1 (ENSMSIG00000013555) #32 Rab7 (ENSMSIG00000013617) #33 Hmces (ENSMSIG00000013812) #35 Copg1 (ENSMSIG00000013836) #36 spretus MODERN SPECIES 15 Vmn1r50 (MGP_SPRETEiJ_G0029662) Vmn1r49 (MGP_SPRETEiJ_G0029661) MGP_SPRETEiJ_G0029660 MGP_SPRETEiJ_G0029659 MGP_SPRETEiJ_G0029658 MGP_SPRETEiJ_G0029657 Vmn1r43 (MGP_SPRETEiJ_G0029656) Vmn1r42 (MGP_SPRETEiJ_G0029655) MGP_SPRETEiJ_G0029654 MGP_SPRETEiJ_G0029653 Txnrd3 (MGP_SPRETEiJ_G0029652) #18 MGP_SPRETEiJ_G0029651 #19 Plxna1 (MGP_SPRETEiJ_G0029650) #20 MGP_SPRETEiJ_G0029649 Tpra1 (MGP_SPRETEiJ_G0029648) #21 Mcm2 (MGP_SPRETEiJ_G0029647) #22 Podxl2 (MGP_SPRETEiJ_G0029646) #23 Abtb1 (MGP_SPRETEiJ_G0029645) #24 Mgll (MGP_SPRETEiJ_G0029644) #25 Kbtbd12 (MGP_SPRETEiJ_G0029643) #26 Sec61a1 (MGP_SPRETEiJ_G0029642) #27 Ruvbl1 (MGP_SPRETEiJ_G0029641) #28 Eefsec (MGP_SPRETEiJ_G0029640) #29 Dnajb8 (MGP_SPRETEiJ_G0029639) #30 Gata2 (MGP_SPRETEiJ_G0029638) #31 Rpn1 (MGP_SPRETEiJ_G0029637) #32 Rab7 (MGP_SPRETEiJ_G0029636) #33 MGP_SPRETEiJ_G0029635 #34 Hmces (MGP_SPRETEiJ_G0029634) #35 Copg1 (MGP_SPRETEiJ_G0029633) #36 Cnbp (MGP_SPRETEiJ_G0029632) #37 Mouse MODERN SPECIES 15 Vmn1r50 (ENSMUSG00000094553) Vmn1r49 (ENSMUSG00000095932) Vmn1r48 (ENSMUSG00000057592) Vmn1r47 (ENSMUSG00000060724) Vmn1r46 (ENSMUSG00000061653) Vmn1r45 (ENSMUSG00000044248) Vmn1r44 (ENSMUSG00000068234) Vmn1r43 (ENSMUSG00000068231) Vmn1r42 (ENSMUSG00000068232) Vmn1r41 (ENSMUSG00000094586) Vmn1r40 (ENSMUSG00000096051) Txnrd3 (ENSMUSG00000000811) #18 Chchd6 (ENSMUSG00000030086) #19 Plxna1 (ENSMUSG00000030084) #20 Tpra1 (ENSMUSG00000002871) #21 Mcm2 (ENSMUSG00000002870) #22 Podxl2 (ENSMUSG00000033152) #23 Abtb1 (ENSMUSG00000030083) #24 Mgll (ENSMUSG00000033174) #25 Kbtbd12 (ENSMUSG00000033182) #26 Sec61a1 (ENSMUSG00000030082) #27 Ruvbl1 (ENSMUSG00000030079) #28 Eefsec (ENSMUSG00000033216) #29 Dnajb8 (ENSMUSG00000048206) #30 Gata2 (ENSMUSG00000015053) #31 Rpn1 (ENSMUSG00000030062) #32 Rab7 (ENSMUSG00000079477) #33 H1f10 (ENSMUSG00000044927) #34 Hmces (ENSMUSG00000030060) #35 Copg1 (ENSMUSG00000030058) #36 Cnbp (ENSMUSG00000030057) #37 Shrew mouse MODERN SPECIES 11 Uroc1 (MGP_PahariEiJ_G0022388) #17 Chst13 (MGP_PahariEiJ_G0022387) BC048671 (MGP_PahariEiJ_G0022386) MGP_PahariEiJ_G0022385 MGP_PahariEiJ_G0022384 MGP_PahariEiJ_G0022383 MGP_PahariEiJ_G0022382 MGP_PahariEiJ_G0022381 Vmn1r44 (MGP_PahariEiJ_G0022380) Vmn1r40 (MGP_PahariEiJ_G0022379) Txnrd3 (MGP_PahariEiJ_G0022378) #18 Chchd6 (MGP_PahariEiJ_G0022377) #19 Plxna1 (MGP_PahariEiJ_G0022376) #20 MGP_PahariEiJ_G0022375 Tpra1 (MGP_PahariEiJ_G0022374) #21 Mcm2 (MGP_PahariEiJ_G0022373) #22 Podxl2 (MGP_PahariEiJ_G0022372) #23 Abtb1 (MGP_PahariEiJ_G0022371) #24 Mgll (MGP_PahariEiJ_G0022370) #25 Kbtbd12 (MGP_PahariEiJ_G0022369) #26 Sec61a1 (MGP_PahariEiJ_G0022368) #27 Ruvbl1 (MGP_PahariEiJ_G0022367) #28 Eefsec (MGP_PahariEiJ_G0022366) #29 Dnajb8 (MGP_PahariEiJ_G0022365) #30 Gata2 (MGP_PahariEiJ_G0022364) #31 Rpn1 (MGP_PahariEiJ_G0022363) #32 Rab7 (MGP_PahariEiJ_G0022362) #33 MGP_PahariEiJ_G0022361 #34 Hmces (MGP_PahariEiJ_G0022360) #35 Copg1 (MGP_PahariEiJ_G0022359) #36 Cnbp (MGP_PahariEiJ_G0022358) #37 Rat MODERN SPECIES 14 ENSRNOG00000065051 Vom1r100 (ENSRNOG00000064314) Vom1r98 (ENSRNOG00000066943) Vom1r97 (ENSRNOG00000068663) Vom1r96 (ENSRNOG00000058628) Vom1r94 (ENSRNOG00000031140) Vom1r93 (ENSRNOG00000063902) Vom1r92 (ENSRNOG00000067584) Vom1r90 (ENSRNOG00000058136) Txnrd3 (ENSRNOG00000059810) #18 Chchd6 (ENSRNOG00000060248) #19 Plxna1 (ENSRNOG00000017003) #20 AABR07061385.2 (ENSRNOG00000060843) Prr20e (ENSRNOG00000026675) Tpra1 (ENSRNOG00000016665) #21 Mcm2 (ENSRNOG00000016316) #22 Podxl2 (ENSRNOG00000016255) #23 Abtb1 (ENSRNOG00000015762) #24 Mgll (ENSRNOG00000014508) #25 Kbtbd12 (ENSRNOG00000061868) #26 Sec61a1 (ENSRNOG00000013743) #27 LOC685085 (ENSRNOG00000062325) Ruvbl1 (ENSRNOG00000013195) #28 Eefsec (ENSRNOG00000012954) #29 Dnajb8 (ENSRNOG00000034088) #30 Gata2 (ENSRNOG00000012347) #31 ENSRNOG00000070501 Rpn1 (ENSRNOG00000046345) #32 Rab7a (ENSRNOG00000012247) #33 H1f10 (ENSRNOG00000027722) #34 Hmces (ENSRNOG00000010474) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 613 Fbln2 (ENSNGAG00000016556) Hdac11 (ENSNGAG00000017728) Nup210 (ENSNGAG00000018875) Iqsec1 (ENSNGAG00000014890) Slc41a3 (ENSNGAG00000015843) #15 Aldh1l1 (ENSNGAG00000017035) #14 Klf15 (ENSNGAG00000018845) #13 Cfap100 (ENSNGAG00000011837) Zxdc (ENSNGAG00000022043) #16 Uroc1 (ENSNGAG00000020922) #17 Chst13 (ENSNGAG00000023581) Txnrd3 (ENSNGAG00000016608) #18 Chchd6 (ENSNGAG00000023667) #19 Plxna1 (ENSNGAG00000007243) #20 Tpra1 (ENSNGAG00000016850) #21 Mcm2 (ENSNGAG00000023436) #22 Podxl2 (ENSNGAG00000005340) #23 Abtb1 (ENSNGAG00000002907) #24 Mgll (ENSNGAG00000013544) #25 ENSNGAG00000023399 #26 Sec61a1 (ENSNGAG00000021635) #27 Ruvbl1 (ENSNGAG00000001573) #28 ENSNGAG00000023278 #29 Dnajb8 (ENSNGAG00000010629) #30 Gata2 (ENSNGAG00000001268) #31 ENSNGAG00000024318 #32 Rab7 (ENSNGAG00000005194) #33 Hmces (ENSNGAG00000023995) #35 Copg1 (ENSNGAG00000021624) #36 Cnbp (ENSNGAG00000005084) #37 Isy1 (ENSNGAG00000015207) Lesser Egyptian jerboa MODERN SPECIES 116 Txnrd3 (ENSJJAG00000019781) #18 Chchd6 (ENSJJAG00000005785) #19 Plxna1 (ENSJJAG00000016193) #20 ENSJJAG00000009122 Tpra1 (ENSJJAG00000021306) #21 Mcm2 (ENSJJAG00000015084) #22 Podxl2 (ENSJJAG00000013158) #23 Abtb1 (ENSJJAG00000003349) #24 Mgll (ENSJJAG00000017428) #25 ENSJJAG00000014292 Kbtbd12 (ENSJJAG00000003832) #26 Sec61a1 (ENSJJAG00000000357) #27 Ruvbl1 (ENSJJAG00000022489) #28 ENSJJAG00000020703 #29 Dnajb8 (ENSJJAG00000014628) #30 Gata2 (ENSJJAG00000017283) #31 Rpn1 (ENSJJAG00000016770) #32 Rab7 (ENSJJAG00000014204) #33 Hmces (ENSJJAG00000013891) #35 Copg1 (ENSJJAG00000021522) #36 ENSJJAG00000010709 #37 Kangaroo rat MODERN SPECIES 472 Cfap100 (ENSDORG00000026244) Zxdc (ENSDORG00000005724) #16 Uroc1 (ENSDORG00000005334) #17 Txnrd3 (ENSDORG00000000091) #18 Chchd6 (ENSDORG00000007486) #19 Plxna1 (ENSDORG00000004516) #20 Tpra1 (ENSDORG00000026236) #21 Mcm2 (ENSDORG00000005648) #22 Podxl2 (ENSDORG00000024076) #23 Abtb1 (ENSDORG00000024349) #24 Mgll (ENSDORG00000027520) #25 Kbtbd12 (ENSDORG00000013538) #26 Sec61a1 (ENSDORG00000000901) #27 Ruvbl1 (ENSDORG00000014592) #28 Eefsec (ENSDORG00000000264) #29 Dnajb8 (ENSDORG00000024345) #30 Gata2 (ENSDORG00000027471) #31 Rpn1 (ENSDORG00000011930) #32 Rab7 (ENSDORG00000027671) #33 Hmces (ENSDORG00000026017) #35 Copg1 (ENSDORG00000012844) #36 Cnbp (ENSDORG00000002919) #37 ENSDORG00000027354 Rodentia_A ANCESTRAL SPECIES 34 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Guinea pig MODERN SPECIES 185 TPRA1 (ENSCPOG00000026182) #21 MCM2 (ENSCPOG00000010112) #22 PODXL2 (ENSCPOG00000001424) #23 ABTB1 (ENSCPOG00000003052) #24 MGLL (ENSCPOG00000003056) #25 KBTBD12 (ENSCPOG00000004863) #26 SEC61A1 (ENSCPOG00000004865) #27 RUVBL1 (ENSCPOG00000009530) #28 EEFSEC (ENSCPOG00000024352) #29 DNAJB8 (ENSCPOG00000030959) #30 GATA2 (ENSCPOG00000009802) #31 RPN1 (ENSCPOG00000004091) #32 RAB7A (ENSCPOG00000034570) #33 ENSCPOG00000038053 ENSCPOG00000037896 #35 ENSCPOG00000020928 Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Long-tailed chinchilla MODERN SPECIES 136 MRPS25 (ENSCLAG00000008381) NR2C2 (ENSCLAG00000011082) FGD5 (ENSCLAG00000011953) C3orf20 (ENSCLAG00000013841) CCDC174 (ENSCLAG00000011014) GRIP2 (ENSCLAG00000013538) SLC6A6 (ENSCLAG00000010187) LSM3 (ENSCLAG00000015997) XPC (ENSCLAG00000013400) TMEM43 (ENSCLAG00000014810) CHCHD4 (ENSCLAG00000015153) TXNRD3 (ENSCLAG00000010439) #18 CHCHD6 (ENSCLAG00000011198) #19 PLXNA1 (ENSCLAG00000007472) #20 TPRA1 (ENSCLAG00000015612) #21 MCM2 (ENSCLAG00000013539) #22 PODXL2 (ENSCLAG00000011183) #23 ABTB1 (ENSCLAG00000010398) #24 MGLL (ENSCLAG00000010527) #25 KBTBD12 (ENSCLAG00000006214) #26 SEC61A1 (ENSCLAG00000004789) #27 RUVBL1 (ENSCLAG00000008051) #28 EEFSEC (ENSCLAG00000006973) #29 DNAJB8 (ENSCLAG00000006709) #30 GATA2 (ENSCLAG00000014980) #31 RPN1 (ENSCLAG00000016036) #32 ENSCLAG00000006333 #33 TSEN2 (ENSCLAG00000011090) PPARG (ENSCLAG00000014746) TIMP4 (ENSCLAG00000005949) ENSCLAG00000005221 Degu MODERN SPECIES 295 GRIP2 (ENSODEG00000001787) ENSODEG00000001738 LSM3 (ENSODEG00000001726) XPC (ENSODEG00000001699) TMEM43 (ENSODEG00000001624) ENSODEG00000001498 TXNRD3 (ENSODEG00000001387) #18 ENSODEG00000001312 ENSODEG00000018745 ENSODEG00000002815 PLXNA1 (ENSODEG00000002675) #20 TPRA1 (ENSODEG00000002274) #21 MCM2 (ENSODEG00000003959) #22 PODXL2 (ENSODEG00000003875) #23 ABTB1 (ENSODEG00000003795) #24 ENSODEG00000003742 MGLL (ENSODEG00000003434) #25 KBTBD12 (ENSODEG00000003397) #26 SEC61A1 (ENSODEG00000003340) #27 RUVBL1 (ENSODEG00000003323) #28 EEFSEC (ENSODEG00000002928) #29 DNAJB8 (ENSODEG00000018895) #30 GATA2 (ENSODEG00000002888) #31 RPN1 (ENSODEG00000002872) #32 ENSODEG00000002857 RAB7A (ENSODEG00000002835) #33 ENSODEG00000002819 Sciuridae ANCESTRAL SPECIES 58 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Marmotini ANCESTRAL SPECIES 93 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315.l #31 ENSGT00940000156315.k #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Alpin marmot MODERN SPECIES 128 TXNRD3 (ENSMMMG00000020753) #18 ENSMMMG00000020786 #19 PLXNA1 (ENSMMMG00000020799) #20 MCM2 (ENSMMMG00000021074) #22 MGLL (ENSMMMG00000021444) #25 ENSMMMG00000021450 #26 SEC61A1 (ENSMMMG00000021456) #27 RUVBL1 (ENSMMMG00000021467) #28 EEFSEC (ENSMMMG00000021474) #29 DNAJB8 (ENSMMMG00000021483) #30 ENSMMMG00000021488 ENSMMMG00000021491 #31 RPN1 (ENSMMMG00000021493) #32 RAB7A (ENSMMMG00000021506) #33 COPG1 (ENSMMMG00000021526) #36 CNBP (ENSMMMG00000022080) #37 ENSMMMG00000022094 RAB43 (ENSMMMG00000022095) GP9 (ENSMMMG00000022097) Marmotini_b ANCESTRAL SPECIES 169 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00900000143259 ENSGT00940000162567 #30 ENSGT00940000156315.l #31 ENSGT00940000156315.k #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Arctic ground squirrel MODERN SPECIES 473 ENSUPAG00010005097 TXNRD3 (ENSUPAG00010005060) #18 CHCHD6 (ENSUPAG00010005057) #19 PLXNA1 (ENSUPAG00010005036) #20 TPRA1 (ENSUPAG00010005011) #21 MCM2 (ENSUPAG00010005000) #22 PODXL2 (ENSUPAG00010004990) #23 ABTB1 (ENSUPAG00010004976) #24 MGLL (ENSUPAG00010004935) #25 KBTBD12 (ENSUPAG00010004923) #26 ENSUPAG00010004903 #27 RUVBL1 (ENSUPAG00010004889) #28 EEFSEC (ENSUPAG00010004881) #29 ENSUPAG00010004878 DNAJB8 (ENSUPAG00010004873) #30 GATA2 (ENSUPAG00010004865) #31 RPN1 (ENSUPAG00010004856) #32 RAB7A (ENSUPAG00010004842) #33 H1-10 (ENSUPAG00010004837) #34 COPG1 (ENSUPAG00010004499) #36 CNBP (ENSUPAG00010004475) #37 Squirrel MODERN SPECIES 398 ENSSTOG00000030399 TXNRD3 (ENSSTOG00000014092) #18 ENSSTOG00000033062 PLXNA1 (ENSSTOG00000026715) #20 MCM2 (ENSSTOG00000021029) #22 ABTB1 (ENSSTOG00000021906) #24 MGLL (ENSSTOG00000023185) #25 ENSSTOG00000020065 #26 SEC61A1 (ENSSTOG00000002214) #27 RUVBL1 (ENSSTOG00000004659) #28 EEFSEC (ENSSTOG00000019802) #29 DNAJB8 (ENSSTOG00000026698) #30 GATA2 (ENSSTOG00000006138) #31 RPN1 (ENSSTOG00000004679) #32 RAB7A (ENSSTOG00000028487) #33 HMCES (ENSSTOG00000030763) #35 COPG1 (ENSSTOG00000003424) #36 CNBP (ENSSTOG00000000173) #37 ISY1 (ENSSTOG00000024769) RAB43 (ENSSTOG00000024799) Eurasian red squirrel MODERN SPECIES 10 NUP210 (ENSSVLG00005015337) HDAC11 (ENSSVLG00005015239) FBLN2 (ENSSVLG00005015192) WNT7A (ENSSVLG00005015151) ENSSVLG00005015108 ENSSVLG00005015044 ENSSVLG00005014984 ENSSVLG00005014949 ENSSVLG00005014928 ENSSVLG00005014888 TXNRD3 (ENSSVLG00005014625) #18 ENSSVLG00005014556 CHCHD6 (ENSSVLG00005014522) #19 PLXNA1 (ENSSVLG00005014487) #20 TPRA1 (ENSSVLG00005014369) #21 MCM2 (ENSSVLG00005014217) #22 PODXL2 (ENSSVLG00005014162) #23 ABTB1 (ENSSVLG00005014044) #24 MGLL (ENSSVLG00005013883) #25 KBTBD12 (ENSSVLG00005013693) #26 SEC61A1 (ENSSVLG00005013613) #27 RUVBL1 (ENSSVLG00005013318) #28 EEFSEC (ENSSVLG00005013205) #29 ENSSVLG00005013112 DNAJB8 (ENSSVLG00005013080) #30 GATA2 (ENSSVLG00005013037) #31 RPN1 (ENSSVLG00005012900) #32 RAB7A (ENSSVLG00005012710) #33 H1-10 (ENSSVLG00005012682) #34 HMCES (ENSSVLG00005012539) #35 COPG1 (ENSSVLG00005012487) #36 Atlantogenata ANCESTRAL SPECIES 34 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Afrotheria ANCESTRAL SPECIES 32 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 ENSGT00390000014109 ENSGT00940000161980 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00950000183042.b #15 ENSGT00940000160913 #14 ENSGT00940000156977 #13 ENSGT00940000153110.A ENSGT00940000162216 #16 ENSGT00390000015136 #17 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 ENSGT00390000014109 ENSGT00940000161980 Elephant MODERN SPECIES 49 TRAK1 (ENSLAFG00000007369) CTNNB1 (ENSLAFG00000018290) RPL14 (ENSLAFG00000010371) ENTPD3 (ENSLAFG00000017276) SLC41A3 (ENSLAFG00000003959) #15 ALDH1L1 (ENSLAFG00000015488) #14 KLF15 (ENSLAFG00000011970) #13 CFAP100 (ENSLAFG00000010385) ENSLAFG00000017934 #16 UROC1 (ENSLAFG00000003586) #17 CHST13 (ENSLAFG00000030095) TXNRD3 (ENSLAFG00000013303) #18 ENSLAFG00000009741 #19 PLXNA1 (ENSLAFG00000030064) #20 TPRA1 (ENSLAFG00000010110) #21 MCM2 (ENSLAFG00000010112) #22 PODXL2 (ENSLAFG00000029373) #23 ABTB1 (ENSLAFG00000004651) #24 MGLL (ENSLAFG00000026229) #25 KBTBD12 (ENSLAFG00000014423) #26 SEC61A1 (ENSLAFG00000009106) #27 RUVBL1 (ENSLAFG00000017383) #28 EEFSEC (ENSLAFG00000001997) #29 GATA2 (ENSLAFG00000029178) #31 RPN1 (ENSLAFG00000000220) #32 RAB7A (ENSLAFG00000007945) #33 HMCES (ENSLAFG00000013939) #35 COPG1 (ENSLAFG00000013929) #36 CNBP (ENSLAFG00000002502) #37 ISY1 (ENSLAFG00000004015) RAB43 (ENSLAFG00000023035) Hyrax MODERN SPECIES 9743 TPRA1 (ENSPCAG00000010339) #21 MCM2 (ENSPCAG00000010421) #22 Tenrec MODERN SPECIES 6834 MCM2 (ENSETEG00000008231) #22 PODXL2 (ENSETEG00000008236) #23 ABTB1 (ENSETEG00000008238) #24 Xenarthra ANCESTRAL SPECIES 861 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 Armadillo MODERN SPECIES 1804 TPRA1 (ENSDNOG00000033901) #21 MCM2 (ENSDNOG00000015931) #22 PODXL2 (ENSDNOG00000047477) #23 ABTB1 (ENSDNOG00000042047) #24 MGLL (ENSDNOG00000012970) #25 KBTBD12 (ENSDNOG00000014429) #26 Sloth MODERN SPECIES 6593 MCM2 (ENSCHOG00000004753) #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Opossum MODERN SPECIES 5 XPC (ENSMODG00000007289) TMEM43 (ENSMODG00000007313) ENSMODG00000007319 ENSMODG00000007369 UROC1 (ENSMODG00000007413) #17 ENSMODG00000007443 ENSMODG00000007452 ENSMODG00000051161 ALDH1L1 (ENSMODG00000007603) #14 SLC41A3 (ENSMODG00000007626) #15 CHST13 (ENSMODG00000007630) TXNRD3 (ENSMODG00000007668) #18 ENSMODG00000028931 #19 PLXNA1 (ENSMODG00000007833) #20 TPRA1 (ENSMODG00000007864) #21 MCM2 (ENSMODG00000007891) #22 PODXL2 (ENSMODG00000007905) #23 ABTB1 (ENSMODG00000007935) #24 MGLL (ENSMODG00000007949) #25 KBTBD12 (ENSMODG00000007955) #26 SEC61A1 (ENSMODG00000007982) #27 RUVBL1 (ENSMODG00000008018) #28 EEFSEC (ENSMODG00000008034) #29 GATA2 (ENSMODG00000008048) #31 RPN1 (ENSMODG00000008079) #32 RAB7A (ENSMODG00000008095) #33 H1-10 (ENSMODG00000008155) #34 ENSMODG00000018764 HMCES (ENSMODG00000008182) #35 COPG1 (ENSMODG00000008326) #36 CNBP (ENSMODG00000008362) #37 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT00390000000903.b #19 ENSGT01050000244850.A.b #20 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT00950000183041.A.e #37 Common wonbat MODERN SPECIES 1012 CHCHD4 (ENSVURG00010015776) ENSVURG00010015780 UROC1 (ENSVURG00010015797) #17 ENSVURG00010015824 ENSVURG00010016102 KLF15 (ENSVURG00010016133) #13 ALDH1L1 (ENSVURG00010016140) #14 SLC41A3 (ENSVURG00010016155) #15 CHST13 (ENSVURG00010016165) TXNRD3 (ENSVURG00010016171) #18 ENSVURG00010016184 CHCHD6 (ENSVURG00010016196) #19 PLXNA1 (ENSVURG00010016213) #20 ENSVURG00010016248 TPRA1 (ENSVURG00010016259) #21 MCM2 (ENSVURG00010016271) #22 PODXL2 (ENSVURG00010016299) #23 ABTB1 (ENSVURG00010016361) #24 MGLL (ENSVURG00010016384) #25 KBTBD12 (ENSVURG00010016417) #26 SEC61A1 (ENSVURG00010016438) #27 RUVBL1 (ENSVURG00010016464) #28 EEFSEC (ENSVURG00010016493) #29 ENSVURG00010016566 DNAJB8 (ENSVURG00010016573) #30 GATA2 (ENSVURG00010016576) #31 RPN1 (ENSVURG00010016597) #32 RAB7A (ENSVURG00010016611) #33 ENSVURG00010016622 #34 ENSVURG00010016629 HMCES (ENSVURG00010016642) #35 koala MODERN SPECIES 10 TMEM43 (ENSPCIG00000007570) ENSPCIG00000007567 ENSPCIG00000007553 UROC1 (ENSPCIG00000007560) #17 ENSPCIG00000007546 CFAP100 (ENSPCIG00000007541) KLF15 (ENSPCIG00000007539) #13 ALDH1L1 (ENSPCIG00000007535) #14 SLC41A3 (ENSPCIG00000030893) #15 CHST13 (ENSPCIG00000031809) TXNRD3 (ENSPCIG00000007513) #18 CHCHD6 (ENSPCIG00000007502) #19 ENSPCIG00000007509 PLXNA1 (ENSPCIG00000018273) #20 TPRA1 (ENSPCIG00000027112) #21 MCM2 (ENSPCIG00000027110) #22 PODXL2 (ENSPCIG00000027108) #23 ABTB1 (ENSPCIG00000027104) #24 MGLL (ENSPCIG00000027100) #25 KBTBD12 (ENSPCIG00000027094) #26 SEC61A1 (ENSPCIG00000030476) #27 RUVBL1 (ENSPCIG00000030477) #28 EEFSEC (ENSPCIG00000020494) #29 DNAJB8 (ENSPCIG00000000133) #30 GATA2 (ENSPCIG00000000175) #31 RPN1 (ENSPCIG00000000200) #32 RAB7A (ENSPCIG00000000237) #33 H1-10 (ENSPCIG00000000261) #34 ENSPCIG00000031362 HMCES (ENSPCIG00000000399) #35 COPG1 (ENSPCIG00000000412) #36 Wallaby DUPLICATION Wallaby MODERN SPECIES 11875 ENSMEUG00000001879 #22 Wallaby MODERN SPECIES 8835 ENSMEUG00000002241 #22 Tasmanian devil MODERN SPECIES XPC (ENSSHAG00000001194) TMEM43 (ENSSHAG00000029957) ENSSHAG00000021201 ENSSHAG00000003679 ENSSHAG00000004989 #17 ENSSHAG00000006236 ENSSHAG00000006525 KLF15 (ENSSHAG00000007635) #13 ALDH1L1 (ENSSHAG00000009971) #14 ENSSHAG00000010624 #15 ENSSHAG00000011415 ENSSHAG00000011983 #18 ENSSHAG00000013122 #19 PLXNA1 (ENSSHAG00000001587) #20 TPRA1 (ENSSHAG00000011029) #21 MCM2 (ENSSHAG00000009218) #22 PODXL2 (ENSSHAG00000011541) #23 ABTB1 (ENSSHAG00000011642) #24 MGLL (ENSSHAG00000022270) #25 KBTBD12 (ENSSHAG00000013098) #26 SEC61A1 (ENSSHAG00000013915) #27 RUVBL1 (ENSSHAG00000014141) #28 EEFSEC (ENSSHAG00000014760) #29 ENSSHAG00000015694 DNAJB8 (ENSSHAG00000015964) #30 GATA2 (ENSSHAG00000016131) #31 ENSSHAG00000023146 #32 ENSSHAG00000025451 #33 ENSSHAG00000026204 ENSSHAG00000026824 #35 COPG1 (ENSSHAG00000016954) #36 Platypus MODERN SPECIES 84 MUSTN1 (ENSOANG00000045634) STIMATE (ENSOANG00000043186) SFMBT1 (ENSOANG00000030105) RFT1 (ENSOANG00000022204) PRKCD (ENSOANG00000004136) PFKFB4 (ENSOANG00000004303) ENSOANG00000048750 ENSOANG00000041592 ENSOANG00000004300 ENSOANG00000039019 ENSOANG00000047095 PLXNB1 (ENSOANG00000004295) PLXNA1 (ENSOANG00000013278) #20 ENSOANG00000021064 #19 TPRA1 (ENSOANG00000003056) #21 MCM2 (ENSOANG00000007166) #22 PODXL2 (ENSOANG00000048912) #23 ABTB1 (ENSOANG00000000959) #24 MGLL (ENSOANG00000047996) #25 KBTBD12 (ENSOANG00000005842) #26 SEC61A1 (ENSOANG00000009106) #27 RUVBL1 (ENSOANG00000009107) #28 EEFSEC (ENSOANG00000009108) #29 ENSOANG00000036896 DNAJB8 (ENSOANG00000006706) #30 GATA2 (ENSOANG00000029173) #31 RPN1 (ENSOANG00000005779) #32 ENSOANG00000001856 #33 ENSOANG00000011250 HMCES (ENSOANG00000001855) #35 COPG1 (ENSOANG00000001854) #36 Sauria ANCESTRAL SPECIES 13 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Archelosauria ANCESTRAL SPECIES 17 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Archosauria ANCESTRAL SPECIES 24 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Aves ANCESTRAL SPECIES 29 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Neognathae ANCESTRAL SPECIES 27 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 Passeriformes ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.n #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Passeroidea ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b.n #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Common canary MODERN SPECIES 15 ENSSCAG00000005009 UROC1 (ENSSCAG00000004991) #17 ENSSCAG00000004983 CHCHD4 (ENSSCAG00000004966) TMEM43 (ENSSCAG00000004954) XPC (ENSSCAG00000004942) LSM3 (ENSSCAG00000004937) SLC6A6 (ENSSCAG00000004898) ENSSCAG00000004841 SLC41A3 (ENSSCAG00000004815) #15 CHST13 (ENSSCAG00000004805) TXNRD3 (ENSSCAG00000004795) #18 PLXNA1 (ENSSCAG00000004775) #20 ENSSCAG00000004760 #19 TPRA1 (ENSSCAG00000004751) #21 MCM2 (ENSSCAG00000004746) #22 PODXL2 (ENSSCAG00000004743) #23 ABTB1 (ENSSCAG00000004735) #24 MGLL (ENSSCAG00000004726) #25 KBTBD12 (ENSSCAG00000004717) #26 SEC61A1 (ENSSCAG00000004712) #27 RUVBL1 (ENSSCAG00000004689) #28 EEFSEC (ENSSCAG00000004678) #29 DNAJB8 (ENSSCAG00000004665) #30 GATA2 (ENSSCAG00000004658) #31 RPN1 (ENSSCAG00000004648) #32 ENSSCAG00000004642 #33 HMCES (ENSSCAG00000004636) #35 COPG1 (ENSSCAG00000004615) #36 ENSSCAG00000004608 ENSSCAG00000004604 Zebra finch MODERN SPECIES 3 LSM3 (ENSTGUG00000008327) XPC (ENSTGUG00000008307) TMEM43 (ENSTGUG00000008280) CHCHD4 (ENSTGUG00000008273) ENSTGUG00000008258 UROC1 (ENSTGUG00000008227) #17 ENSTGUG00000018312 CFAP100 (ENSTGUG00000008217) KLF15 (ENSTGUG00000008214) #13 SLC41A3 (ENSTGUG00000008199) #15 CHST13 (ENSTGUG00000008191) TXNRD3 (ENSTGUG00000008152) #18 PLXNA1 (ENSTGUG00000008067) #20 ENSTGUG00000027600 #19 TPRA1 (ENSTGUG00000008045) #21 MCM2 (ENSTGUG00000008031) #22 PODXL2 (ENSTGUG00000008022) #23 ABTB1 (ENSTGUG00000008002) #24 MGLL (ENSTGUG00000019506) #25 KBTBD12 (ENSTGUG00000007987) #26 SEC61A1 (ENSTGUG00000007959) #27 RUVBL1 (ENSTGUG00000007914) #28 EEFSEC (ENSTGUG00000007895) #29 DNAJB8 (ENSTGUG00000007894) #30 ENSTGUG00000021454 GATA2 (ENSTGUG00000007879) #31 RPN1 (ENSTGUG00000007857) #32 RAB7A (ENSTGUG00000007832) #33 H1-10 (ENSTGUG00000027546) #34 HMCES (ENSTGUG00000007825) #35 COPG1 (ENSTGUG00000007768) #36 Medium ground finch MODERN SPECIES 20 LSM3 (ENSGFOG00000008878) XPC (ENSGFOG00000008887) TMEM43 (ENSGFOG00000008907) CHCHD4 (ENSGFOG00000008917) ENSGFOG00000008926 UROC1 (ENSGFOG00000008934) #17 ENSGFOG00000008953 CFAP100 (ENSGFOG00000008967) KLF15 (ENSGFOG00000008995) #13 SLC41A3 (ENSGFOG00000008999) #15 CHST13 (ENSGFOG00000009013) TXNRD3 (ENSGFOG00000009020) #18 PLXNA1 (ENSGFOG00000009131) #20 ENSGFOG00000010062 #19 TPRA1 (ENSGFOG00000010078) #21 MCM2 (ENSGFOG00000010084) #22 PODXL2 (ENSGFOG00000010090) #23 ABTB1 (ENSGFOG00000010096) #24 MGLL (ENSGFOG00000010108) #25 KBTBD12 (ENSGFOG00000010114) #26 SEC61A1 (ENSGFOG00000010124) #27 Flycatcher MODERN SPECIES 3 LSM3 (ENSFALG00000012644) XPC (ENSFALG00000012642) TMEM43 (ENSFALG00000012635) CHCHD4 (ENSFALG00000028192) ENSFALG00000012626 UROC1 (ENSFALG00000012619) #17 ENSFALG00000012609 CFAP100 (ENSFALG00000012603) KLF15 (ENSFALG00000012601) #13 SLC41A3 (ENSFALG00000002080) #15 CHST13 (ENSFALG00000026839) ENSFALG00000007847 #18 ENSFALG00000007849 #20 ENSFALG00000007851 #19 TPRA1 (ENSFALG00000007855) #21 MCM2 (ENSFALG00000007857) #22 PODXL2 (ENSFALG00000007860) #23 ABTB1 (ENSFALG00000007868) #24 MGLL (ENSFALG00000007883) #25 KBTBD12 (ENSFALG00000007885) #26 SEC61A1 (ENSFALG00000007889) #27 RUVBL1 (ENSFALG00000007894) #28 ENSFALG00000024665 #29 EEFSEC (ENSFALG00000007901) #29 DNAJB8 (ENSFALG00000025661) #30 ENSFALG00000025652 GATA2 (ENSFALG00000007910) #31 RPN1 (ENSFALG00000007922) #32 RAB7A (ENSFALG00000007930) #33 H1-10 (ENSFALG00000025637) #34 ENSFALG00000014697 Great tit MODERN SPECIES 3 LSM3 (ENSPMJG00000013238) XPC (ENSPMJG00000012831) TMEM43 (ENSPMJG00000012830) CHCHD4 (ENSPMJG00000012829) ENSPMJG00000012828 UROC1 (ENSPMJG00000012826) #17 ENSPMJG00000012825 CFAP100 (ENSPMJG00000012824) KLF15 (ENSPMJG00000012823) #13 SLC41A3 (ENSPMJG00000012821) #15 CHST13 (ENSPMJG00000012820) TXNRD3 (ENSPMJG00000012818) #18 PLXNA1 (ENSPMJG00000012816) #20 ENSPMJG00000012815 #19 TPRA1 (ENSPMJG00000012814) #21 MCM2 (ENSPMJG00000012813) #22 PODXL2 (ENSPMJG00000012812) #23 ABTB1 (ENSPMJG00000012811) #24 MGLL (ENSPMJG00000012810) #25 KBTBD12 (ENSPMJG00000012809) #26 SEC61A1 (ENSPMJG00000012808) #27 RUVBL1 (ENSPMJG00000012806) #28 EEFSEC (ENSPMJG00000012805) #29 ENSPMJG00000012801 ENSPMJG00000012800 GATA2 (ENSPMJG00000012796) #31 RPN1 (ENSPMJG00000012793) #32 RAB7A (ENSPMJG00000012792) #33 H1-10 (ENSPMJG00000012791) #34 ENSPMJG00000012790 HMCES (ENSPMJG00000012789) #35 Neognathae_c ANCESTRAL SPECIES 21 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Kakapo MODERN SPECIES 3 XPC (ENSSHBG00005018333) TMEM43 (ENSSHBG00005018350) CHCHD4 (ENSSHBG00005018450) ENSSHBG00005018453 UROC1 (ENSSHBG00005018461) #17 ENSSHBG00005018469 CFAP100 (ENSSHBG00005018478) KLF15 (ENSSHBG00005018483) #13 SLC41A3 (ENSSHBG00005018487) #15 CHST13 (ENSSHBG00005018491) TXNRD3 (ENSSHBG00005018495) #18 ENSSHBG00005018503 #20 ENSSHBG00005018513 #20 CHCHD6 (ENSSHBG00005018520) #19 TPRA1 (ENSSHBG00005018525) #21 MCM2 (ENSSHBG00005018527) #22 PODXL2 (ENSSHBG00005018531) #23 ABTB1 (ENSSHBG00005018535) #24 MGLL (ENSSHBG00005018539) #25 KBTBD12 (ENSSHBG00005018544) #26 SEC61A1 (ENSSHBG00005018547) #27 RUVBL1 (ENSSHBG00005018549) #28 EEFSEC (ENSSHBG00005018553) #29 ENSSHBG00005018558 GATA2 (ENSSHBG00005018562) #31 ENSSHBG00005018567 RPN1 (ENSSHBG00005018569) #32 RAB7A (ENSSHBG00005018574) #33 H1-10 (ENSSHBG00005018576) #34 ENSSHBG00005018580 HMCES (ENSSHBG00005018584) #35 Golden eagle MODERN SPECIES 12 LSM3 (ENSACCG00020009737) XPC (ENSACCG00020009715) TMEM43 (ENSACCG00020009687) CHCHD4 (ENSACCG00020009661) ENSACCG00020009642 UROC1 (ENSACCG00020009609) #17 ENSACCG00020009560 ENSACCG00020009520 KLF15 (ENSACCG00020009511) #13 SLC41A3 (ENSACCG00020009488) #15 CHST13 (ENSACCG00020009455) TXNRD3 (ENSACCG00020009439) #18 PLXNA1 (ENSACCG00020009421) #20 ENSACCG00020009394 #19 TPRA1 (ENSACCG00020009367) #21 MCM2 (ENSACCG00020009318) #22 PODXL2 (ENSACCG00020009302) #23 ABTB1 (ENSACCG00020009282) #24 MGLL (ENSACCG00020009254) #25 KBTBD12 (ENSACCG00020009234) #26 SEC61A1 (ENSACCG00020009218) #27 RUVBL1 (ENSACCG00020009200) #28 EEFSEC (ENSACCG00020009179) #29 DNAJB8 (ENSACCG00020009160) #30 ENSACCG00020009146 GATA2 (ENSACCG00020009131) #31 RPN1 (ENSACCG00020009106) #32 RAB7A (ENSACCG00020009085) #33 H1-10 (ENSACCG00020009076) #34 ENSACCG00020009070 HMCES (ENSACCG00020009060) #35 Galloanserae ANCESTRAL SPECIES 26 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Phasianidae ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT01030000235385 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00940000153118.db.a.a.b.a.a.b.a.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Turkey MODERN SPECIES 5 LSM3 (ENSMGAG00000007776) XPC (ENSMGAG00000007750) TMEM43 (ENSMGAG00000007717) CHCHD4 (ENSMGAG00000021277) ENSMGAG00000007685 UROC1 (ENSMGAG00000007651) #17 ENSMGAG00000007639 CFAP100 (ENSMGAG00000007620) KLF15 (ENSMGAG00000007616) #13 SLC41A3 (ENSMGAG00000007576) #15 ENSMGAG00000007567 ENSMGAG00000007529 #18 ENSMGAG00000007508 #20 ENSMGAG00000007467 #19 TPRA1 (ENSMGAG00000007445) #21 MCM2 (ENSMGAG00000007374) #22 PODXL2 (ENSMGAG00000007365) #23 ABTB1 (ENSMGAG00000007350) #24 MGLL (ENSMGAG00000007336) #25 KBTBD12 (ENSMGAG00000007327) #26 SEC61A1 (ENSMGAG00000007282) #27 RUVBL1 (ENSMGAG00000007246) #28 EEFSEC (ENSMGAG00000007243) #29 ENSMGAG00000019312 GATA2 (ENSMGAG00000016475) #31 RPN1 (ENSMGAG00000007231) #32 RAB7A (ENSMGAG00000007208) #33 ENSMGAG00000019081 ENSMGAG00000007189 #35 ENSMGAG00000007126 #36 ENSMGAG00000022810 Chicken MODERN SPECIES 3 LSM3 (ENSGALG00010021258) XPC (ENSGALG00010021252) TMEM43 (ENSGALG00010021241) CHCHD4 (ENSGALG00010021227) NTN4L (ENSGALG00010021222) UROC1 (ENSGALG00010021202) #17 ENSGALG00010021190 CFAP100 (ENSGALG00010021183) KLF15 (ENSGALG00010021173) #13 SLC41A3 (ENSGALG00010021164) #15 CHST13 (ENSGALG00010021154) TXNRD3 (ENSGALG00010021129) #18 PLXNA1 (ENSGALG00010022196) #20 ENSGALG00010028196 #19 TPRA1 (ENSGALG00010028187) #21 MCM2 (ENSGALG00010028179) #22 ENSGALG00010028178 #23 ABTB1 (ENSGALG00010026982) #24 MGLL (ENSGALG00010026973) #25 KBTBD12 (ENSGALG00010028414) #26 SEC61A1 (ENSGALG00010026960) #27 RUVBL1 (ENSGALG00010026951) #28 EEFSEC (ENSGALG00010026943) #29 ENSGALG00010026925 GATA2 (ENSGALG00010026920) #31 RPN1 (ENSGALG00010027286) #32 RAB7A (ENSGALG00010027283) #33 ENSGALG00010027282 HMCES (ENSGALG00010027280) #35 H1-10 (ENSGALG00010027278) #34 COPG1 (ENSGALG00010027274) #36 Japanese quail MODERN SPECIES 3 LSM3 (ENSCJPG00005016126) XPC (ENSCJPG00005016125) TMEM43 (ENSCJPG00005016123) CHCHD4 (ENSCJPG00005016122) ENSCJPG00005016121 UROC1 (ENSCJPG00005016013) #17 ENSCJPG00005016011 CFAP100 (ENSCJPG00005016005) KLF15 (ENSCJPG00005016002) #13 SLC41A3 (ENSCJPG00005015992) #15 CHST13 (ENSCJPG00005015991) TXNRD3 (ENSCJPG00005015989) #18 PLXNA1 (ENSCJPG00005013965) #20 ENSCJPG00005013964 #19 TPRA1 (ENSCJPG00005013963) #21 MCM2 (ENSCJPG00005013962) #22 PODXL2 (ENSCJPG00005013961) #23 ABTB1 (ENSCJPG00005013960) #24 MGLL (ENSCJPG00005013959) #25 KBTBD12 (ENSCJPG00005013958) #26 SEC61A1 (ENSCJPG00005013957) #27 RUVBL1 (ENSCJPG00005013956) #28 EEFSEC (ENSCJPG00005013955) #29 DNAJB8 (ENSCJPG00005013954) #30 GATA2 (ENSCJPG00005013953) #31 RPN1 (ENSCJPG00005013951) #32 RAB7A (ENSCJPG00005013950) #33 H1-10 (ENSCJPG00005013949) #34 ENSCJPG00005013948 HMCES (ENSCJPG00005013947) #35 COPG1 (ENSCJPG00005013946) #36 Anatidae ANCESTRAL SPECIES 48 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT01030000235510 Pink-footed goose MODERN SPECIES 95 LSM3 (ENSABRG00000010342) XPC (ENSABRG00000010322) TMEM43 (ENSABRG00000010309) CHCHD4 (ENSABRG00000010300) ENSABRG00000010289 UROC1 (ENSABRG00000009894) #17 ENSABRG00000009849 CFAP100 (ENSABRG00000009839) KLF15 (ENSABRG00000009826) #13 SLC41A3 (ENSABRG00000009804) #15 CHST13 (ENSABRG00000009793) TXNRD3 (ENSABRG00000009756) #18 PLXNA1 (ENSABRG00000009694) #20 CHCHD6 (ENSABRG00000009683) #19 TPRA1 (ENSABRG00000009675) #21 MCM2 (ENSABRG00000009664) #22 PODXL2 (ENSABRG00000009659) #23 ABTB1 (ENSABRG00000009643) #24 MGLL (ENSABRG00000009629) #25 KBTBD12 (ENSABRG00000009611) #26 SEC61A1 (ENSABRG00000009603) #27 RUVBL1 (ENSABRG00000009587) #28 EEFSEC (ENSABRG00000009583) #29 DNAJB8 (ENSABRG00000009559) #30 GATA2 (ENSABRG00000009553) #31 RPN1 (ENSABRG00000009533) #32 RAB7A (ENSABRG00000009523) #33 H1-10 (ENSABRG00000009519) #34 HMCES (ENSABRG00000009512) #35 COPG1 (ENSABRG00000009484) #36 ENSABRG00000009474 Duck MODERN SPECIES 4 CAND2 (ENSAPLG00000003936) ENSAPLG00000004194 IFT122 (ENSAPLG00000004234) RHO (ENSAPLG00000005189) ENSAPLG00000005857 ENSAPLG00000024672 PLXND1 (ENSAPLG00000005859) TMCC1 (ENSAPLG00000007270) TRH (ENSAPLG00000007356) RBSN (ENSAPLG00000007412) MRPS25 (ENSAPLG00000029888) NR2C2 (ENSAPLG00000007538) FGD5 (ENSAPLG00000007924) ENSAPLG00000004192 #19 TPRA1 (ENSAPLG00000004211) #21 MCM2 (ENSAPLG00000004520) #22 PODXL2 (ENSAPLG00000005040) #23 ABTB1 (ENSAPLG00000005102) #24 MGLL (ENSAPLG00000005523) #25 KBTBD12 (ENSAPLG00000005631) #26 SEC61A1 (ENSAPLG00000005703) #27 RUVBL1 (ENSAPLG00000006088) #28 EEFSEC (ENSAPLG00000006745) #29 ENSAPLG00000029764 #31 RPN1 (ENSAPLG00000004411) #32 RAB7A (ENSAPLG00000004323) #33 ENSAPLG00000020965 HMCES (ENSAPLG00000004071) #35 COPG1 (ENSAPLG00000002838) #36 ENSAPLG00000017276 UQCRC1 (ENSAPLG00000001974) African ostrich MODERN SPECIES 416 TMEM43 (ENSSCUG00000007824) CHCHD4 (ENSSCUG00000007826) ENSSCUG00000007828 UROC1 (ENSSCUG00000007832) #17 ENSSCUG00000007837 CFAP100 (ENSSCUG00000007841) KLF15 (ENSSCUG00000007844) #13 ENSSCUG00000007845 SLC41A3 (ENSSCUG00000007848) #15 CHST13 (ENSSCUG00000007851) ENSSCUG00000007852 TXNRD3 (ENSSCUG00000007858) #18 PLXNA1 (ENSSCUG00000007866) #20 CHCHD6 (ENSSCUG00000007876) #19 TPRA1 (ENSSCUG00000007879) #21 MCM2 (ENSSCUG00000007882) #22 PODXL2 (ENSSCUG00000007886) #23 ABTB1 (ENSSCUG00000007888) #24 MGLL (ENSSCUG00000007890) #25 KBTBD12 (ENSSCUG00000007893) #26 SEC61A1 (ENSSCUG00000007895) #27 RUVBL1 (ENSSCUG00000007904) #28 EEFSEC (ENSSCUG00000007910) #29 ENSSCUG00000007912 ENSSCUG00000007914 ENSSCUG00000007917 #31 RPN1 (ENSSCUG00000007921) #32 RAB7A (ENSSCUG00000007924) #33 HMCES (ENSSCUG00000007926) #35 COPG1 (ENSSCUG00000007929) #36 ARL6IP5 (ENSSCUG00000007930) Australian saltwater crocodile MODERN SPECIES 37 LSM3 (ENSCPRG00005017591) XPC (ENSCPRG00005017622) TMEM43 (ENSCPRG00005017741) CHCHD4 (ENSCPRG00005017745) ENSCPRG00005017757 UROC1 (ENSCPRG00005017780) #17 ENSCPRG00005017797 CFAP100 (ENSCPRG00005017801) KLF15 (ENSCPRG00005017808) #13 SLC41A3 (ENSCPRG00005017815) #15 CHST13 (ENSCPRG00005017822) TXNRD3 (ENSCPRG00005017900) #18 PLXNA1 (ENSCPRG00005018072) #20 CHCHD6 (ENSCPRG00005018101) #19 TPRA1 (ENSCPRG00005018104) #21 MCM2 (ENSCPRG00005018109) #22 PODXL2 (ENSCPRG00005018114) #23 ABTB1 (ENSCPRG00005018116) #24 MGLL (ENSCPRG00005018119) #25 ENSCPRG00005018120 KBTBD12 (ENSCPRG00005018121) #26 SEC61A1 (ENSCPRG00005018123) #27 RUVBL1 (ENSCPRG00005018126) #28 EEFSEC (ENSCPRG00005018127) #29 ENSCPRG00005018129 GATA2 (ENSCPRG00005018131) #31 RPN1 (ENSCPRG00005018143) #32 RAB7A (ENSCPRG00005018178) #33 H1-10 (ENSCPRG00005018181) #34 HMCES (ENSCPRG00005018182) #35 COPG1 (ENSCPRG00005018187) #36 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00960000189676 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385.a ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Emydidae ANCESTRAL SPECIES 13 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 ENSGT01030000235510 Three-toed box turtle MODERN SPECIES 33 SLC6A6 (ENSTMTG00000020095) XPC (ENSTMTG00000020128) TMEM43 (ENSTMTG00000020161) CHCHD4 (ENSTMTG00000020171) ENSTMTG00000009407 UROC1 (ENSTMTG00000009635) #17 ENSTMTG00000009694 CFAP100 (ENSTMTG00000009787) KLF15 (ENSTMTG00000010012) #13 SLC41A3 (ENSTMTG00000010025) #15 CHST13 (ENSTMTG00000010062) TXNRD3 (ENSTMTG00000010077) #18 PLXNA1 (ENSTMTG00000010144) #20 CHCHD6 (ENSTMTG00000010204) #19 TPRA1 (ENSTMTG00000010240) #21 MCM2 (ENSTMTG00000010267) #22 PODXL2 (ENSTMTG00000010337) #23 ABTB1 (ENSTMTG00000010495) #24 MGLL (ENSTMTG00000010511) #25 KBTBD12 (ENSTMTG00000010545) #26 SEC61A1 (ENSTMTG00000010588) #27 RUVBL1 (ENSTMTG00000010618) #28 EEFSEC (ENSTMTG00000010647) #29 DNAJB8 (ENSTMTG00000010671) #30 ENSTMTG00000010687 GATA2 (ENSTMTG00000010699) #31 RPN1 (ENSTMTG00000010717) #32 RAB7A (ENSTMTG00000010739) #33 H1-10 (ENSTMTG00000010751) #34 ENSTMTG00000010760 HMCES (ENSTMTG00000010771) #35 painted turtle MODERN SPECIES 699 LSM3 (ENSCPBG00000014531) XPC (ENSCPBG00000014521) TMEM43 (ENSCPBG00000014515) CHCHD4 (ENSCPBG00000014513) ENSCPBG00000014510 UROC1 (ENSCPBG00000014452) #17 ENSCPBG00000014442 CFAP100 (ENSCPBG00000014435) KLF15 (ENSCPBG00000014431) #13 SLC41A3 (ENSCPBG00000014419) #15 CHST13 (ENSCPBG00000014414) TXNRD3 (ENSCPBG00000014404) #18 PLXNA1 (ENSCPBG00000014392) #20 CHCHD6 (ENSCPBG00000014388) #19 TPRA1 (ENSCPBG00000014386) #21 MCM2 (ENSCPBG00000014382) #22 PODXL2 (ENSCPBG00000014381) #23 ABTB1 (ENSCPBG00000014379) #24 MGLL (ENSCPBG00000014377) #25 KBTBD12 (ENSCPBG00000014373) #26 SEC61A1 (ENSCPBG00000014367) #27 RUVBL1 (ENSCPBG00000014361) #28 EEFSEC (ENSCPBG00000014356) #29 DNAJB8 (ENSCPBG00000014352) #30 GATA2 (ENSCPBG00000014348) #31 RPN1 (ENSCPBG00000014345) #32 RAB7A (ENSCPBG00000014343) #33 H1-10 (ENSCPBG00000014342) #34 ENSCPBG00000014334 HMCES (ENSCPBG00000014333) #35 COPG1 (ENSCPBG00000014326) #36 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00990000205522 ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT01030000235385.a ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005006079 UROC1 (ENSGEVG00005005863) #17 ENSGEVG00005005723 ENSGEVG00005005681 ENSGEVG00005005658 KLF15 (ENSGEVG00005005641) #13 SLC41A3 (ENSGEVG00005004799) #15 CHST13 (ENSGEVG00005004550) TXNRD3 (ENSGEVG00005004510) #18 ENSGEVG00005004491 ENSGEVG00005004477 ENSGEVG00005004450 PLXNA1 (ENSGEVG00005004198) #20 CHCHD6 (ENSGEVG00005004106) #19 TPRA1 (ENSGEVG00005004075) #21 MCM2 (ENSGEVG00005004063) #22 ENSGEVG00005004046 PODXL2 (ENSGEVG00005004032) #23 ABTB1 (ENSGEVG00005020013) #24 MGLL (ENSGEVG00005020007) #25 KBTBD12 (ENSGEVG00005020003) #26 SEC61A1 (ENSGEVG00005019999) #27 RUVBL1 (ENSGEVG00005019989) #28 EEFSEC (ENSGEVG00005019984) #29 DNAJB8 (ENSGEVG00005019975) #30 GATA2 (ENSGEVG00005019972) #31 RPN1 (ENSGEVG00005019961) #32 RAB7A (ENSGEVG00005019958) #33 H1-10 (ENSGEVG00005019957) #34 ENSGEVG00005019953 HMCES (ENSGEVG00005019944) #35 Abingdon island giant tortoise MODERN SPECIES 2223 ENSCABG00000008968 #19 TPRA1 (ENSCABG00000008970) #21 MCM2 (ENSCABG00000008975) #22 PODXL2 (ENSCABG00000008978) #23 ABTB1 (ENSCABG00000008980) #24 MGLL (ENSCABG00000008982) #25 KBTBD12 (ENSCABG00000008985) #26 SEC61A1 (ENSCABG00000008986) #27 RUVBL1 (ENSCABG00000008989) #28 EEFSEC (ENSCABG00000008991) #29 ENSCABG00000008995 ENSCABG00000009033 SVBP (ENSCABG00000009037) Chinese turtle MODERN SPECIES 863 TXNRD3 (ENSPSIG00000007047) #18 PLXNA1 (ENSPSIG00000007550) #20 CHCHD6 (ENSPSIG00000010223) #19 TPRA1 (ENSPSIG00000010558) #21 MCM2 (ENSPSIG00000011042) #22 ENSPSIG00000012756 #23 ABTB1 (ENSPSIG00000012926) #24 MGLL (ENSPSIG00000012935) #25 KBTBD12 (ENSPSIG00000012977) #26 SEC61A1 (ENSPSIG00000014020) #27 RUVBL1 (ENSPSIG00000014837) #28 EEFSEC (ENSPSIG00000015135) #29 DNAJB8 (ENSPSIG00000000348) #30 Lepidosauria ANCESTRAL SPECIES 14 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567 #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a ENSGT00390000018439 #35 Episquamata ANCESTRAL SPECIES 4 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Laterata ANCESTRAL SPECIES 1 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178.u #18 ENSGT00940000154420.C.h.a ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Common wall lizard MODERN SPECIES 10 ENSPMRG00000011264 ENSPMRG00000011217 #17 ENSPMRG00000011199 #17 ENSPMRG00000011188 CFAP100 (ENSPMRG00000011175) KLF15 (ENSPMRG00000011173) #13 SLC41A3 (ENSPMRG00000011167) #15 CHST13 (ENSPMRG00000011159) TXNRD3 (ENSPMRG00000011148) #18 ENSPMRG00000011144 ENSPMRG00000011130 PLXNA1 (ENSPMRG00000011115) #20 ENSPMRG00000011112 ENSPMRG00000011105 #19 TPRA1 (ENSPMRG00000011092) #21 MCM2 (ENSPMRG00000011085) #22 PODXL2 (ENSPMRG00000011080) #23 ABTB1 (ENSPMRG00000011070) #24 MGLL (ENSPMRG00000011055) #25 KBTBD12 (ENSPMRG00000011043) #26 SEC61A1 (ENSPMRG00000011031) #27 RUVBL1 (ENSPMRG00000011024) #28 EEFSEC (ENSPMRG00000011012) #29 DNAJB8 (ENSPMRG00000011002) #30 GATA2 (ENSPMRG00000010998) #31 RPN1 (ENSPMRG00000010992) #32 RAB7A (ENSPMRG00000010986) #33 ENSPMRG00000010983 H1-10 (ENSPMRG00000010980) #34 ENSPMRG00000010978 HMCES (ENSPMRG00000010972) #35 Argentine black and white tegu MODERN SPECIES 8 CHCHD4 (ENSSMRG00000002521) ENSSMRG00000002514 UROC1 (ENSSMRG00000001185) #17 ENSSMRG00000001157 CFAP100 (ENSSMRG00000001120) KLF15 (ENSSMRG00000001106) #13 ENSSMRG00000001036 ENSSMRG00000001018 SLC41A3 (ENSSMRG00000000928) #15 CHST13 (ENSSMRG00000000915) TXNRD3 (ENSSMRG00000000838) #18 ENSSMRG00000000832 PLXNA1 (ENSSMRG00000000739) #20 ENSSMRG00000000660 #19 TPRA1 (ENSSMRG00000000546) #21 MCM2 (ENSSMRG00000000504) #22 PODXL2 (ENSSMRG00000000490) #23 ABTB1 (ENSSMRG00000000466) #24 MGLL (ENSSMRG00000000405) #25 KBTBD12 (ENSSMRG00000000387) #26 SEC61A1 (ENSSMRG00000000301) #27 RUVBL1 (ENSSMRG00000000262) #28 ENSSMRG00000000213 #30 ENSSMRG00000000203 #30 GATA2 (ENSSMRG00000000167) #31 ENSSMRG00000000054 RPN1 (ENSSMRG00000000016) #32 RAB7A (ENSSMRG00000021116) #33 H1-10 (ENSSMRG00000021115) #34 ENSSMRG00000021113 HMCES (ENSSMRG00000021112) #35 Toxicofera ANCESTRAL SPECIES 3 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Elapidae ANCESTRAL SPECIES 2 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00940000159738.b ENSGT00390000000903.b #19 ENSGT00900000141932 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000010229 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Elapidae_a ANCESTRAL SPECIES 8 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00940000159738.b ENSGT00900000141932 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000010229 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.A ENSGT00940000156977 #13 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00940000159738.b ENSGT00900000141932 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000010229 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000162567.b #30 ENSGT00940000162567.a #30 ENSGT00940000156315 #31 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a Eastern brown snake MODERN SPECIES 3 TMEM43 (ENSPTXG00000003067) CHCHD4 (ENSPTXG00000003068) ENSPTXG00000003070 UROC1 (ENSPTXG00000003078) #17 ENSPTXG00000003081 CFAP100 (ENSPTXG00000003082) KLF15 (ENSPTXG00000003151) #13 SLC41A3 (ENSPTXG00000003152) #15 CHST13 (ENSPTXG00000003156) TXNRD3 (ENSPTXG00000003158) #18 PLXNA1 (ENSPTXG00000003183) #20 ENSPTXG00000003422 ENSPTXG00000003423 #19 ENSPTXG00000003424 TPRA1 (ENSPTXG00000003426) #21 MCM2 (ENSPTXG00000003437) #22 PODXL2 (ENSPTXG00000003523) #23 C12orf4 (ENSPTXG00000003524) ABTB1 (ENSPTXG00000003525) #24 MGLL (ENSPTXG00000003526) #25 KBTBD12 (ENSPTXG00000003528) #26 SEC61A1 (ENSPTXG00000003530) #27 RUVBL1 (ENSPTXG00000003532) #28 EEFSEC (ENSPTXG00000003533) #29 ENSPTXG00000003534 #30 ENSPTXG00000003536 #30 GATA2 (ENSPTXG00000003537) #31 RPN1 (ENSPTXG00000003538) #32 RAB7A (ENSPTXG00000003539) #33 H1-10 (ENSPTXG00000003540) #34 ENSPTXG00000003541 Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000001741 UROC1 (ENSNSUG00000001729) #17 ENSNSUG00000001726 ENSNSUG00000001724 ENSNSUG00000001721 KLF15 (ENSNSUG00000001719) #13 SLC41A3 (ENSNSUG00000001713) #15 CHST13 (ENSNSUG00000001711) TXNRD3 (ENSNSUG00000001166) #18 ENSNSUG00000001155 PLXNA1 (ENSNSUG00000001028) #20 ENSNSUG00000001016 ENSNSUG00000001009 ENSNSUG00000001007 TPRA1 (ENSNSUG00000000429) #21 MCM2 (ENSNSUG00000000407) #22 PODXL2 (ENSNSUG00000000403) #23 C12orf4 (ENSNSUG00000000400) ABTB1 (ENSNSUG00000000394) #24 MGLL (ENSNSUG00000000098) #25 KBTBD12 (ENSNSUG00000000057) #26 SEC61A1 (ENSNSUG00000000050) #27 RUVBL1 (ENSNSUG00000000007) #28 ENSNSUG00000020298 #29 EEFSEC (ENSNSUG00000020297) #29 GATA2 (ENSNSUG00000020295) #31 RPN1 (ENSNSUG00000020294) #32 RAB7A (ENSNSUG00000020293) #33 H1-10 (ENSNSUG00000020292) #34 ENSNSUG00000020291 HMCES (ENSNSUG00000020290) #35 Blue-lipped sea krait MODERN SPECIES 10059 MCM2 (ENSLLTG00000009978) #22 Indian cobra MODERN SPECIES 1 ENSNNAG00000018977 UROC1 (ENSNNAG00000018994) #17 ENSNNAG00000019015 ENSNNAG00000019018 KLF15 (ENSNNAG00000019020) #13 ENSNNAG00000019026 #15 ENSNNAG00000019033 #15 ENSNNAG00000019036 #15 CHST13 (ENSNNAG00000019037) TXNRD3 (ENSNNAG00000019039) #18 PLXNA1 (ENSNNAG00000019046) #20 ENSNNAG00000019063 ENSNNAG00000019066 ENSNNAG00000019068 TPRA1 (ENSNNAG00000019073) #21 MCM2 (ENSNNAG00000019079) #22 ENSNNAG00000019081 PODXL2 (ENSNNAG00000019083) #23 ENSNNAG00000019086 ABTB1 (ENSNNAG00000019087) #24 MGLL (ENSNNAG00000019090) #25 KBTBD12 (ENSNNAG00000019092) #26 SEC61A1 (ENSNNAG00000019096) #27 RUVBL1 (ENSNNAG00000019098) #28 EEFSEC (ENSNNAG00000019099) #29 ENSNNAG00000019101 #30 ENSNNAG00000000323 #30 GATA2 (ENSNNAG00000000343) #31 RPN1 (ENSNNAG00000000359) #32 ENSNNAG00000000396 #33 H2AX (ENSNNAG00000000431) Lizard MODERN SPECIES 1 CHST13 (ENSACAG00000040038) ENSACAG00000014005 #18 ENSACAG00000044615 ENSACAG00000035770 ENSACAG00000041924 ENSACAG00000043029 ENSACAG00000038087 ENSACAG00000042825 ENSACAG00000007544 #20 ENSACAG00000040888 #20 ENSACAG00000041051 ENSACAG00000034913 ENSACAG00000041400 ENSACAG00000007543 #19 TPRA1 (ENSACAG00000007501) #21 MCM2 (ENSACAG00000007455) #22 PODXL2 (ENSACAG00000007435) #23 ABTB1 (ENSACAG00000007369) #24 ENSACAG00000036767 MGLL (ENSACAG00000007334) #25 KBTBD12 (ENSACAG00000007321) #26 SEC61A1 (ENSACAG00000007248) #27 RUVBL1 (ENSACAG00000007201) #28 ENSACAG00000043743 EEFSEC (ENSACAG00000028177) #29 ENSACAG00000045444 ENSACAG00000005807 #30 ENSACAG00000042631 #30 GATA2 (ENSACAG00000045513) #31 ENSACAG00000005837 RPN1 (ENSACAG00000005839) #32 tuatara MODERN SPECIES 54 PLXNA1 (ENSSPUG00000003281) #20 ENSSPUG00000003914 TPRA1 (ENSSPUG00000003949) #21 MCM2 (ENSSPUG00000003968) #22 PODXL2 (ENSSPUG00000003994) #23 ABTB1 (ENSSPUG00000004030) #24 MGLL (ENSSPUG00000004059) #25 KBTBD12 (ENSSPUG00000004134) #26 SEC61A1 (ENSSPUG00000004146) #27 RUVBL1 (ENSSPUG00000004163) #28 ENSSPUG00000004177 #29 EEFSEC (ENSSPUG00000004191) #29 GATA2 (ENSSPUG00000004217) #31 ENSSPUG00000004245 #32 RAB7A (ENSSPUG00000004262) #33 ENSSPUG00000004303 HMCES (ENSSPUG00000004309) #35 COPG1 (ENSSPUG00000004325) #36 UQCRC1 (ENSSPUG00000004358) Anura ANCESTRAL SPECIES 36 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000165132 ENSGT00390000015136 #17 ENSGT00940000164258 ENSGT00940000153110.B ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00390000011364 #25 ENSGT00940000156836 #26 ENSGT00390000003721.d.a #27 ENSGT00940000153556.A #28 ENSGT00940000158170 #29 ENSGT00940000156315 #31 ENSGT00940000165491 ENSGT00390000009630 #32 ENSGT00940000155864.a.b #33 ENSGT00730000111536 #34 ENSGT01020000230360.c.a ENSGT00390000018439 #35 ENSGT00390000016313.a.b #36 Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000019987 ENSLLEG00000019824 KLF15 (ENSLLEG00000019778) #13 ENSLLEG00000019703 ENSLLEG00000019683 ALDH1L1 (ENSLLEG00000019392) #14 ENSLLEG00000019256 #15 CHST13 (ENSLLEG00000019171) ENSLLEG00000019146 ENSLLEG00000018797 #18 ENSLLEG00000018692 ENSLLEG00000018661 PLXNA1 (ENSLLEG00000017683) #20 ENSLLEG00000016948 #19 ENSLLEG00000016883 MCM2 (ENSLLEG00000016598) #22 TPRA1 (ENSLLEG00000016357) #21 PODXL2 (ENSLLEG00000016236) #23 ENSLLEG00000016210 ENSLLEG00000016187 ABTB1 (ENSLLEG00000015915) #24 MGLL (ENSLLEG00000015856) #25 KBTBD12 (ENSLLEG00000015765) #26 ENSLLEG00000015724 SEC61A1 (ENSLLEG00000015234) #27 RUVBL1 (ENSLLEG00000015116) #28 ENSLLEG00000015066 EEFSEC (ENSLLEG00000014919) #29 GATA2 (ENSLLEG00000014722) #31 ENSLLEG00000014628 #32 ENSLLEG00000014534 #33 Frog MODERN SPECIES 4 tmem43 (ENSXETG00000011540) chchd4 (ENSXETG00000025311) ENSXETG00000011542 uroc1 (ENSXETG00000011543) #17 zxdc (ENSXETG00000011547) cfap100 (ENSXETG00000011548) klf15 (ENSXETG00000011549) #13 aldh1l1 (ENSXETG00000011551) #14 slc41a3 (ENSXETG00000004787) #15 chst13 (ENSXETG00000004794) #18 ENSXETG00000042479 plxna1 (ENSXETG00000018635) #20 chchd6 (ENSXETG00000018684) #19 ENSXETG00000035971 tpra1 (ENSXETG00000036087) #21 mcm2 (ENSXETG00000002059) #22 podxl2 (ENSXETG00000039537) #23 abtb1 (ENSXETG00000002061) #24 mgll (ENSXETG00000002062) #25 kbtbd12 (ENSXETG00000031782) #26 sec61a1 (ENSXETG00000024743) #27 ruvbl1 (ENSXETG00000002064) #28 eefsec (ENSXETG00000002066) #29 gata2 (ENSXETG00000016171) #31 ENSXETG00000043594 rpn1 (ENSXETG00000016175) #32 rab7a (ENSXETG00000016176) #33 mgc69473 (ENSXETG00000042020) #34 ENSXETG00000047199 hmces (ENSXETG00000024746) #35 copg1 (ENSXETG00000016180) #36 Coelacanth MODERN SPECIES 351 PLXNA1 (ENSLACG00000005715) #20 chchd6b (ENSLACG00000009466) #19 TPRA1 (ENSLACG00000010780) #21 MCM2 (ENSLACG00000011014) #22 PODXL2 (ENSLACG00000011229) #23 ABTB1 (ENSLACG00000011392) #24 MGLL (ENSLACG00000011685) #25 KBTBD12 (ENSLACG00000012517) #26 SEC61A1 (ENSLACG00000012749) #27 RUVBL1 (ENSLACG00000012962) #28 EEFSEC (ENSLACG00000013137) #29 GATA2 (ENSLACG00000015208) #31 ENSLACG00000015368 ENSLACG00000015636 RPN1 (ENSLACG00000015681) #32 RAB7A (ENSLACG00000015770) #33 h1-10 (ENSLACG00000015984) #34 h1-10 (ENSLACG00000022163) #34 ENSLACG00000016077 Actinopterygii ANCESTRAL SPECIES 141 ENSGT00940000157877.a ENSGT00940000165995 ENSGT00940000157446 ENSGT00990000203541.a.b.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000164258 ENSGT00940000156977 #13 ENSGT00940000160913 #14 ENSGT00950000183042.b #15 ENSGT00940000161154 ENSGT00940000159178 #18 ENSGT01050000244850.A.b #20 ENSGT00390000000903.b #19 ENSGT00390000016807 #21 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 Reedfish MODERN SPECIES 9 nos1 (ENSECRG00000020549) KSR2 (ENSECRG00000020476) rfc5 (ENSECRG00000020441) wsb2 (ENSECRG00000020430) ENSECRG00000020414 PEBP1 (ENSECRG00000020405) ENSECRG00000020398 TAOK3 (ENSECRG00000020378) suds3 (ENSECRG00000020335) ENSECRG00000020319 ENSECRG00000020304 ENSECRG00000020290 ENSECRG00000020235 #20 ENSECRG00000020180 #19 tpra1 (ENSECRG00000020116) #21 mcm2 (ENSECRG00000020065) #22 zgc:171566 (ENSECRG00000020032) LSM3 (ENSECRG00000020010) slc6a6b (ENSECRG00000019983) GRIP2 (ENSECRG00000018586) sec13 (ENSECRG00000018488) cand2 (ENSECRG00000018469) RPL32 (ENSECRG00000018447) RFT1 (ENSECRG00000018406) SFMBT1 (ENSECRG00000018351) stimate (ENSECRG00000018256) mustn1b (ENSECRG00000018218) itih3a.1 (ENSECRG00000018012) ENSECRG00000017513 ENSECRG00000022824 qrich1 (ENSECRG00000022821) Neopterygii ANCESTRAL SPECIES 70 ENSGT00940000166028 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000017131 #24 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873 ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000005874 ENSGT00940000155514 ENSGT00390000007160.a.a Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT00390000002190 ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00940000166028 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873 ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000007160.a.a ENSGT00940000160561 Clupeocephala ANCESTRAL SPECIES 7 ENSGT00940000161232 ENSGT00390000015021 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT00390000002190 ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000007160.a.a Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k ENSGT00390000002190 ENSGT01090000260174 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a Acanthomorphata ANCESTRAL SPECIES 71 ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a ENSGT00390000018016 Euacanthomorphacea ANCESTRAL SPECIES 72 ENSGT00950000182846.a.a.b.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Pinecone sodierfish MODERN SPECIES 19 or90a1 (ENSMMDG00005005788) ENSMMDG00005005793 ENSMMDG00005005801 KCNS1 (ENSMMDG00005005813) ENSMMDG00005005878 cox6c (ENSMMDG00005006156) ANGPT4 (ENSMMDG00005006167) ENSMMDG00005006503 cand2 (ENSMMDG00005006506) sec13 (ENSMMDG00005006511) BRCC3 (ENSMMDG00005006518) ENSMMDG00005006519 rbl1 (ENSMMDG00005006525) psmf1 (ENSMMDG00005006531) pigu (ENSMMDG00005006532) mcm2 (ENSMMDG00005006566) #22 ENSMMDG00005009354 #23 blcap (ENSMMDG00005009358) ripor3 (ENSMMDG00005009362) CHD6 (ENSMMDG00005009374) rspo4 (ENSMMDG00005009389) PTPRT (ENSMMDG00005009429) zgc:171566 (ENSMMDG00005010560) GRIP2 (ENSMMDG00005010568) slc6a6b (ENSMMDG00005010607) LSM3 (ENSMMDG00005012308) ENSMMDG00005012311 RIMS4 (ENSMMDG00005012312) ENSMMDG00005012315 PIK3C2B (ENSMMDG00005012343) ENSMMDG00005014385 Percomorphaceae ANCESTRAL SPECIES 33 ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00950000182846.a.a.b.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000153649.A ENSGT01040000241001 ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b Tiger tail seahorse MODERN SPECIES 513 prickle2b (ENSHCOG00000011912) mcm2 (ENSHCOG00000011966) #22 zgc:171566 (ENSHCOG00000011992) PTPRT (ENSHCOG00000012064) rspo4 (ENSHCOG00000012080) ENSHCOG00000012108 ripor3 (ENSHCOG00000012120) blcap (ENSHCOG00000012133) rbl1 (ENSHCOG00000012180) psmf1 (ENSHCOG00000012194) pigu (ENSHCOG00000012234) cyc1 (ENSHCOG00000012243) raly (ENSHCOG00000012268) ENSHCOG00000012290 ahcy (ENSHCOG00000012330) ENSHCOG00000012340 ENSHCOG00000012352 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Ovalentaria ANCESTRAL SPECIES 2 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Oryzias ANCESTRAL SPECIES 59 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309.g ENSGT00940000156326.a.b ENSGT00940000179841 ENSGT00390000009678 ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 Oryzias_a ANCESTRAL SPECIES 94 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00940000165920.b ENSGT00940000165309.g ENSGT00940000156326.a.b ENSGT00940000179841 ENSGT00390000009678 ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 Chinese medaka MODERN SPECIES 127 mcm2 (ENSOSIG00000019558) #22 ENSOSIG00000019554 #23 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000029294 oser1 (ENSORLG00000025333) manf (ENSORLG00000028270) rbm15b (ENSORLG00000025754) pcbp4 (ENSORLG00000003061) foxp1b (ENSORLG00000003081) zgc:113054 (ENSORLG00000003095) ENSORLG00000023023 ENSORLG00000029419 mitfa (ENSORLG00000003123) ENSORLG00000022242 ENSORLG00000022697 ENSORLG00000003143 trnt1 (ENSORLG00000003165) ENSORLG00000003170 mcm2 (ENSORLG00000003191) #22 ENSORLG00000025961 #23 blcap (ENSORLG00000026381) ENSORLG00000003227 ENSORLG00000003286 ENSORLG00000026691 itr1 (ENSORLG00000003297) cav4a (ENSORLG00000027005) rrp9 (ENSORLG00000003315) grm2b (ENSORLG00000003328) TEX264 (ENSORLG00000027237) brk1 (ENSORLG00000022796) rbm5 (ENSORLG00000003369) ENSORLG00000003445 gnai2b (ENSORLG00000022563) inka1b (ENSORLG00000003453) Oryzias_b ANCESTRAL SPECIES 65 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309.g ENSGT00940000156326.a.b ENSGT00940000179841 ENSGT00390000009678 ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 Indian medaka MODERN SPECIES 8 uqcc1 (ENSOMEG00000000077) GDF5 (ENSOMEG00000003585) ENSOMEG00000003580 ENSOMEG00000003570 oser1 (ENSOMEG00000003557) manf (ENSOMEG00000003547) rbm15b (ENSOMEG00000000801) pcbp4 (ENSOMEG00000003516) foxp1b (ENSOMEG00000003447) ENSOMEG00000003410 zgc:113054 (ENSOMEG00000003392) mitfa (ENSOMEG00000003364) trnt1 (ENSOMEG00000003331) ENSOMEG00000003313 lmcd1 (ENSOMEG00000003298) mcm2 (ENSOMEG00000003267) #22 blcap (ENSOMEG00000003240) ENSOMEG00000003225 ENSOMEG00000003185 ENSOMEG00000003166 ENSOMEG00000003153 pcgf1 (ENSOMEG00000003141) lbx2 (ENSOMEG00000003113) nanos1 (ENSOMEG00000003107) LIMCH1 (ENSOMEG00000003079) phox2bb (ENSOMEG00000003025) tmem33 (ENSOMEG00000003014) bbs7 (ENSOMEG00000002989) ccna2 (ENSOMEG00000002951) ENSOMEG00000002942 anxa5a (ENSOMEG00000002931) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b.r ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c.n Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c.m.b Mangrove rivulus MODERN SPECIES 121 pdhb (ENSKMAG00000013726) pxk (ENSKMAG00000013757) HTD2 (ENSKMAG00000013829) ENSKMAG00000013843 ENSKMAG00000013863 ENSKMAG00000013871 ABHD6 (ENSKMAG00000013902) lmcd1 (ENSKMAG00000013944) mcm2 (ENSKMAG00000013981) #22 ENSKMAG00000014083 #23 blcap (ENSKMAG00000014112) ENSKMAG00000014128 ripor3 (ENSKMAG00000014169) ENSKMAG00000014242 ENSKMAG00000014262 RSPO4 (ENSKMAG00000014287) PTPRT (ENSKMAG00000014489) zgc:171566 (ENSKMAG00000014850) GRIP2 (ENSKMAG00000014940) slc6a6b (ENSKMAG00000015136) LSM3 (ENSKMAG00000015182) ENSKMAG00000015236 RIMS4 (ENSKMAG00000015252) YWHAB (ENSKMAG00000015283) Turquoise killifish MODERN SPECIES 1619 MAGI3 (ENSNFUG00015010562) ENSNFUG00015010547 ENSNFUG00015010540 Nfu_g_1_020813 (ENSNFUG00015010528) ENSNFUG00015010522 PLXNA2 (ENSNFUG00015010192) ##20 ENSNFUG00015010096 ENSNFUG00015010075 ora1 (ENSNFUG00015010063) phtf1 (ENSNFUG00015010047) PFKFB2 (ENSNFUG00015009513) yod1 (ENSNFUG00015009446) zgc:158258 (ENSNFUG00015009431) ENSNFUG00015009416 LMCD1 (ENSNFUG00015009398) MCM2 (ENSNFUG00015009278) #22 PODXL2 (ENSNFUG00015009251) #23 BLCAP (ENSNFUG00015009235) FAM65C (ENSNFUG00015021815) CHD6 (ENSNFUG00015021686) rspo4 (ENSNFUG00015021679) BX927253.1 (ENSNFUG00015021674) PTPRT (ENSNFUG00015017179) ENSNFUG00015017042 Nfu_g_1_021471 (ENSNFUG00015017037) GRIP2 (ENSNFUG00015015885) SLC6A6A (ENSNFUG00015015269) LSM3 (ENSNFUG00015015161) Nfu_g_1_021249 (ENSNFUG00015014946) RBM12 (ENSNFUG00015014576) cpne1 (ENSNFUG00015012394) Cyprinodontoidei ANCESTRAL SPECIES 77 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Poeciliinae ANCESTRAL SPECIES 31 ENSGT00390000006658.a.a ENSGT00940000157802 ENSGT00390000012411 ENSGT00530000063735.a.b ENSGT00940000158385 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c.n Poecilia ANCESTRAL SPECIES 25 ENSGT00940000156550.a ENSGT00550000074784.b.f ENSGT00940000174941 ENSGT00940000158156.a ENSGT00940000157205 ENSGT00940000177776 ENSGT00940000158909 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.a.a.b.a ENSGT00390000006658.a.a ENSGT00940000157802 ENSGT00390000012411 ENSGT00530000063735.a.b.g ENSGT00940000158385 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c.n NAME_6 ANCESTRAL SPECIES 262 ENSGT00940000158385 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00390000009571.a.b.a.b.h.b ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Sailfin molly MODERN SPECIES 292 ENSPLAG00000002999 lmcd1 (ENSPLAG00000003006) mcm2 (ENSPLAG00000003032) #22 ENSPLAG00000003047 #23 blcap (ENSPLAG00000003055) ripor3 (ENSPLAG00000003083) CHD6 (ENSPLAG00000003128) rspo4 (ENSPLAG00000003154) ENSPLAG00000003165 Amazon molly MODERN SPECIES 357 arhgef3 (ENSPFOG00000011936) ENSPFOG00000020645 lmcd1 (ENSPFOG00000011850) mcm2 (ENSPFOG00000011685) #22 ENSPFOG00000011671 #23 blcap (ENSPFOG00000020644) ripor3 (ENSPFOG00000011492) ENSPFOG00000010939 rspo4 (ENSPFOG00000010891) ENSPFOG00000010869 PTPRT (ENSPFOG00000009123) zgc:171566 (ENSPFOG00000009003) GRIP2 (ENSPFOG00000008525) slc6a6b (ENSPFOG00000008415) LSM3 (ENSPFOG00000008372) ENSPFOG00000008363 RIMS4 (ENSPFOG00000008320) YWHAB (ENSPFOG00000008238) tomm34 (ENSPFOG00000008162) Guppy MODERN SPECIES 457 ASB14 (ENSPREG00000022867) ENSPREG00000022860 rps23 (ENSPREG00000022850) ENSPREG00000022841 ENSPREG00000022835 pde12 (ENSPREG00000022831) ENSPREG00000022824 gmppb (ENSPREG00000022817) ENSPREG00000022808 osgn1 (ENSPREG00000022801) IP6K1 (ENSPREG00000022796) ENSPREG00000022783 arhgef3 (ENSPREG00000022771) ENSPREG00000022767 lmcd1 (ENSPREG00000022762) mcm2 (ENSPREG00000022748) #22 ENSPREG00000022737 #23 blcap (ENSPREG00000022730) ripor3 (ENSPREG00000022691) CHD6 (ENSPREG00000022653) rspo4 (ENSPREG00000022639) ENSPREG00000022625 ENSPREG00000022619 PTPRT (ENSPREG00000022602) zgc:171566 (ENSPREG00000022580) GRIP2 (ENSPREG00000022527) slc6a6b (ENSPREG00000022491) LSM3 (ENSPREG00000022485) ENSPREG00000022474 RIMS4 (ENSPREG00000022461) ENSPREG00000022423 Platyfish MODERN SPECIES 12 il17rd (ENSXMAG00000008778) pxk (ENSXMAG00000008793) pdhb (ENSXMAG00000008822) ENSXMAG00000025314 ENSXMAG00000026268 ccdc71 (ENSXMAG00000020114) stab1 (ENSXMAG00000021784) ENSXMAG00000029242 NISCH (ENSXMAG00000000318) ENSXMAG00000023453 hgh1 (ENSXMAG00000000313) zgc:153675 (ENSXMAG00000022860) arhgef3 (ENSXMAG00000025917) ENSXMAG00000022108 lmcd1 (ENSXMAG00000000309) mcm2 (ENSXMAG00000000302) #22 ENSXMAG00000021779 #23 blcap (ENSXMAG00000019463) ripor3 (ENSXMAG00000012157) IP6K1 (ENSXMAG00000012185) osgepl1 (ENSXMAG00000022739) ENSXMAG00000026386 ENSXMAG00000020957 rspo4 (ENSXMAG00000000286) PTPRT (ENSXMAG00000000264) zgc:171566 (ENSXMAG00000021526) GRIP2 (ENSXMAG00000009165) slc6a6b (ENSXMAG00000009153) LSM3 (ENSXMAG00000009151) ENSXMAG00000009150 RIMS4 (ENSXMAG00000009148) NAME_4 ANCESTRAL SPECIES 411 ENSGT00390000012411 ENSGT00940000157802 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00940000158813 ENSGT01050000244824.F #22 Sheepshead minnow MODERN SPECIES 1525 IP6K1 (ENSCVAG00000019424) osgn1 (ENSCVAG00000019454) ENSCVAG00000019473 ENSCVAG00000019477 mcm2 (ENSCVAG00000019493) #22 ENSCVAG00000019502 ENSCVAG00000019515 ENSCVAG00000019521 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Cichlidae ANCESTRAL SPECIES 1 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b.cc ENSGT01050000244866.D.a.c.h Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00940000157928 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00530000065109 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b.cc ENSGT01050000244866.D.a.c.h Haplochromini ANCESTRAL SPECIES 1 ENSGT00390000010053 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000157928 ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b.cc ENSGT01050000244866.D.a.c.h Haplochromini_A ANCESTRAL SPECIES ENSGT00390000010053 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000157928 ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b.cc ENSGT01050000244866.D.a.c.h P. nyererei MODERN SPECIES 541 ippk (ENSPNYG00000022148) rbbp5 (ENSPNYG00000022173) zgc:153675 (ENSPNYG00000022210) hgh1 (ENSPNYG00000022220) ENSPNYG00000022235 ENSPNYG00000022245 stab1 (ENSPNYG00000022293) ENSPNYG00000022399 ccdc71 (ENSPNYG00000022406) ENSPNYG00000022412 pdhb (ENSPNYG00000022423) pxk (ENSPNYG00000022441) rpp14 (ENSPNYG00000022453) ABHD6 (ENSPNYG00000022459) lmcd1 (ENSPNYG00000022464) mcm2 (ENSPNYG00000022469) #22 blcap (ENSPNYG00000022481) ripor3 (ENSPNYG00000022490) ENSPNYG00000022501 CHD6 (ENSPNYG00000022516) ENSPNYG00000022566 Haplochromini_B ANCESTRAL SPECIES ENSGT00390000010053 ENSGT00530000064100 ENSGT00390000013899.a.b ENSGT00390000016546 ENSGT00620000089227 ENSGT00940000156494 ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000157928 ENSGT00940000155306.a ENSGT00940000157869.f ENSGT00940000155146 ENSGT00390000017669 ENSGT00510000048121 ENSGT00510000047225.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00460000041731.C.c.b.b ENSGT00940000164996.A.d.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00940000169847 ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 Eastern happy MODERN SPECIES 17 ENSACLG00000004771 ENSACLG00000004780 ENSACLG00000004813 stab1 (ENSACLG00000005183) ENSACLG00000005423 ENSACLG00000005435 ccdc71 (ENSACLG00000005444) ENSACLG00000005447 ENSACLG00000005454 ENSACLG00000005458 pdhb (ENSACLG00000005893) pxk (ENSACLG00000005918) rpp14 (ENSACLG00000006157) ABHD6 (ENSACLG00000006186) lmcd1 (ENSACLG00000006217) mcm2 (ENSACLG00000006226) #22 ENSACLG00000006270 blcap (ENSACLG00000006274) ripor3 (ENSACLG00000006280) ENSACLG00000006311 ENSACLG00000006337 PTPRT (ENSACLG00000006357) ENSACLG00000006511 ENSACLG00000006515 zgc:171566 (ENSACLG00000006527) ENSACLG00000007039 GRIP2 (ENSACLG00000007045) ENSACLG00000007073 slc6a6b (ENSACLG00000007075) ENSACLG00000007108 ENSACLG00000007131 Zebra mbuna MODERN SPECIES 1108 ippk (ENSMZEG00005017051) rbbp5 (ENSMZEG00005017040) zgc:153675 (ENSMZEG00005017033) hgh1 (ENSMZEG00005017028) ENSMZEG00005017023 ENSMZEG00005017005 ENSMZEG00005016998 stab1 (ENSMZEG00005016959) ccdc71 (ENSMZEG00005016949) ENSMZEG00005016941 pdhb (ENSMZEG00005016928) pxk (ENSMZEG00005016864) rpp14 (ENSMZEG00005016843) ABHD6 (ENSMZEG00005016838) lmcd1 (ENSMZEG00005016837) mcm2 (ENSMZEG00005016827) #22 ENSMZEG00005016818 #23 blcap (ENSMZEG00005016817) ENSMZEG00005016812 ripor3 (ENSMZEG00005016783) ENSMZEG00005016756 ENSMZEG00005016753 ENSMZEG00005016748 PTPRT (ENSMZEG00005016737) ENSMZEG00005016710 ENSMZEG00005016708 zgc:171566 (ENSMZEG00005016703) GRIP2 (ENSMZEG00005016699) slc6a6b (ENSMZEG00005016690) ENSMZEG00005016687 LSM3 (ENSMZEG00005016682) Burton s mouthbrooder MODERN SPECIES 621 ENSHBUG00000014277 ccdc71 (ENSHBUG00000014283) ENSHBUG00000014330 pdhb (ENSHBUG00000014341) pxk (ENSHBUG00000014359) rpp14 (ENSHBUG00000014383) ABHD6 (ENSHBUG00000014425) lmcd1 (ENSHBUG00000014434) mcm2 (ENSHBUG00000014551) #22 ENSHBUG00000014578 #23 blcap (ENSHBUG00000014584) ripor3 (ENSHBUG00000014634) CHD6 (ENSHBUG00000014701) ENSHBUG00000014722 Lyretail cichlid MODERN SPECIES 294 rbbp5 (ENSNBRG00000012966) zgc:153675 (ENSNBRG00000013008) hgh1 (ENSNBRG00000013015) ENSNBRG00000013056 ENSNBRG00000013074 stab1 (ENSNBRG00000013159) ENSNBRG00000013419 ccdc71 (ENSNBRG00000013429) ENSNBRG00000013434 pdhb (ENSNBRG00000013454) pxk (ENSNBRG00000013498) HTD2 (ENSNBRG00000013603) rpp14 (ENSNBRG00000013614) ABHD6 (ENSNBRG00000013641) lmcd1 (ENSNBRG00000013672) mcm2 (ENSNBRG00000013686) #22 blcap (ENSNBRG00000013740) ripor3 (ENSNBRG00000013748) CHD6 (ENSNBRG00000013839) rspo4 (ENSNBRG00000014063) PTPRT (ENSNBRG00000014099) zgc:171566 (ENSNBRG00000014172) GRIP2 (ENSNBRG00000014239) slc6a6b (ENSNBRG00000014311) LSM3 (ENSNBRG00000014318) ENSNBRG00000014351 RIMS4 (ENSNBRG00000014369) YWHAB (ENSNBRG00000014393) tomm34 (ENSNBRG00000014430) ENSNBRG00000014475 ENSNBRG00000014544 Nile tilapia MODERN SPECIES 17 rbbp5 (ENSONIG00000000468) ENSONIG00000037729 zgc:153675 (ENSONIG00000000466) hgh1 (ENSONIG00000000462) NISCH (ENSONIG00000000457) stab1 (ENSONIG00000000426) ENSONIG00000031297 ccdc71 (ENSONIG00000038353) ENSONIG00000000422 pdhb (ENSONIG00000000416) pxk (ENSONIG00000027396) HTD2 (ENSONIG00000020731) rpp14 (ENSONIG00000031687) ABHD6 (ENSONIG00000000411) lmcd1 (ENSONIG00000000408) mcm2 (ENSONIG00000000404) #22 ENSONIG00000032385 #23 blcap (ENSONIG00000035245) ripor3 (ENSONIG00000000401) CHD6 (ENSONIG00000000393) ENSONIG00000000392 PTPRT (ENSONIG00000000384) zgc:171566 (ENSONIG00000000380) GRIP2 (ENSONIG00000000373) slc6a6b (ENSONIG00000000371) LSM3 (ENSONIG00000000370) ENSONIG00000000367 rims4 (ENSONIG00000036454) YWHAB (ENSONIG00000017317) tomm34 (ENSONIG00000000360) ENSONIG00000035273 Midas cichlid MODERN SPECIES 945 ENSACIG00000010510 zgc:153675 (ENSACIG00000010502) hgh1 (ENSACIG00000010475) ENSACIG00000010468 ENSACIG00000010435 ENSACIG00000010421 stab1 (ENSACIG00000010316) ccdc71 (ENSACIG00000010298) ENSACIG00000010285 pdhb (ENSACIG00000010107) pxk (ENSACIG00000009910) HTD2 (ENSACIG00000009881) rpp14 (ENSACIG00000009835) ABHD6 (ENSACIG00000009756) lmcd1 (ENSACIG00000009734) mcm2 (ENSACIG00000009681) #22 blcap (ENSACIG00000009676) ripor3 (ENSACIG00000009616) ENSACIG00000009577 ENSACIG00000009564 Pomacentridae ANCESTRAL SPECIES 139 ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a ENSGT00940000166455 ENSGT00950000183062.a.b.a ENSGT00940000158813 ENSGT01050000244824.F #22 Pomacentridae_A ANCESTRAL SPECIES 141 ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a ENSGT00940000166455 ENSGT00950000183062.a.b.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 #23 Amphiprion ANCESTRAL SPECIES 174 ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a ENSGT00940000166455 ENSGT00950000183062.a.b.a ENSGT00940000158813 ENSGT01050000244824.F #22 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 #23 ENSGT00950000183127.c.b.d.a.a.a.b Orange clownfish MODERN SPECIES 20 cpne1 (ENSAPEG00000021373) ENSAPEG00000021442 ENSAPEG00000021563 ENSAPEG00000021571 ENSAPEG00000021584 st3gal8 (ENSAPEG00000021608) ENSAPEG00000021628 ENSAPEG00000021647 ENSAPEG00000021663 REM1 (ENSAPEG00000021680) pnp4a (ENSAPEG00000021731) trib3 (ENSAPEG00000022071) ENSAPEG00000022086 ENSAPEG00000022101 lmcd1 (ENSAPEG00000022134) mcm2 (ENSAPEG00000022154) #22 ENSAPEG00000022241 ripor3 (ENSAPEG00000022278) blcap (ENSAPEG00000022320) ENSAPEG00000022346 pck1 (ENSAPEG00000022362) PMEPA1 (ENSAPEG00000022380) ENSAPEG00000022402 ENSAPEG00000022462 ENSAPEG00000022471 ENSAPEG00000022505 ENSAPEG00000022518 osgn1 (ENSAPEG00000022534) ccdc51 (ENSAPEG00000022548) tma7 (ENSAPEG00000022566) dnase1l4.1 (ENSAPEG00000022607) Clown anemonefish MODERN SPECIES 2965 lmcd1 (ENSAOCG00000024206) mcm2 (ENSAOCG00000024178) #22 Spiny chromis MODERN SPECIES 616 lmcd1 (ENSAPOG00000013589) ENSAPOG00000013609 mcm2 (ENSAPOG00000013702) #22 ENSAPOG00000013736 ENSAPOG00000013745 ripor3 (ENSAPOG00000013774) Bicolor damselfish MODERN SPECIES 1307 ENSSPAG00000003345 ENSSPAG00000003374 REM1 (ENSSPAG00000003414) pnp4a (ENSSPAG00000003419) trib3 (ENSSPAG00000003459) lmcd1 (ENSSPAG00000003464) mcm2 (ENSSPAG00000003485) #22 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Eupercaria ANCESTRAL SPECIES ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Tetraodontidae ANCESTRAL SPECIES 289 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 Fugu MODERN SPECIES 10 ENSTRUG00000021583 ENSTRUG00000020276 IP6K1 (ENSTRUG00000026515) ENSTRUG00000031648 ENSTRUG00000027111 ENSTRUG00000030015 ASB14 (ENSTRUG00000004831) rps23 (ENSTRUG00000032236) ENSTRUG00000027702 ENSTRUG00000023267 pde12 (ENSTRUG00000005159) gmppb (ENSTRUG00000005517) lmcd1 (ENSTRUG00000005704) aldh1l1 (ENSTRUG00000006080) #14 pigu (ENSTRUG00000007128) mcm2 (ENSTRUG00000007322) #22 ENSTRUG00000029249 #23 ENSTRUG00000030747 ENSTRUG00000030545 ENSTRUG00000028331 ENSTRUG00000028322 ENSTRUG00000026377 ENSTRUG00000026351 ENSTRUG00000032675 ENSTRUG00000020080 ENSTRUG00000032621 ahcy (ENSTRUG00000002607) asip (ENSTRUG00000003467) chmp4b (ENSTRUG00000033019) ccdc71 (ENSTRUG00000030040) pdhb (ENSTRUG00000002340) Tetraodon MODERN SPECIES 26 lrrc39 (ENSTNIG00000004723) MAP1S (ENSTNIG00000004722) il17rd (ENSTNIG00000017503) arhgef3 (ENSTNIG00000017502) IP6K1 (ENSTNIG00000017501) IP6K1 (ENSTNIG00000017500) ASB14 (ENSTNIG00000017499) rps23 (ENSTNIG00000002407) ENSTNIG00000017498 pde12 (ENSTNIG00000017497) gmppb (ENSTNIG00000017496) lmcd1 (ENSTNIG00000017495) ABHD6 (ENSTNIG00000017494) aldh1l1 (ENSTNIG00000017493) #14 pigu (ENSTNIG00000017492) mcm2 (ENSTNIG00000017491) #22 ENSTNIG00000017490 #23 blcap (ENSTNIG00000017489) ripor3 (ENSTNIG00000017488) CHD6 (ENSTNIG00000017487) pck1 (ENSTNIG00000017486) ENSTNIG00000017485 appl1 (ENSTNIG00000006821) ENSTNIG00000000796 ENSTNIG00000001632 ENSTNIG00000003021 ENSTNIG00000003567 ENSTNIG00000000231 ENSTNIG00000014251 ENSTNIG00000014252 fezf2 (ENSTNIG00000014253) Eupecaria_A ANCESTRAL SPECIES ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1839 pigu (ENSLBEG00000025914) mcm2 (ENSLBEG00000025859) #22 Ballan wrasse MODERN SPECIES 736 TMEM74B (ENSLBEG00000005908) psmf1 (ENSLBEG00000005942) pigu (ENSLBEG00000006055) mcm2 (ENSLBEG00000006141) #22 ENSLBEG00000006243 #23 blcap (ENSLBEG00000006265) ripor3 (ENSLBEG00000006284) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Eupecaria_C ANCESTRAL SPECIES ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c European seabass MODERN SPECIES 10 ENSDLAG00005010670 ENSDLAG00005018463 ENSDLAG00005010648 ENSDLAG00005010643 ENSDLAG00005003923 ENSDLAG00005003925 ENSDLAG00005031509 ENSDLAG00005034830 ENSDLAG00005027176 ENSDLAG00005034007 ENSDLAG00005003939 ENSDLAG00005027938 ENSDLAG00005020249 ENSDLAG00005020243 ENSDLAG00005020193 ENSDLAG00005020042 #22 ENSDLAG00005020023 #23 blcap (ENSDLAG00005020020) ripor3 (ENSDLAG00005020011) ENSDLAG00005016739 ENSDLAG00005016675 ENSDLAG00005014719 ENSDLAG00005014560 GRIP2 (ENSDLAG00005012133) ENSDLAG00005010961 LSM3 (ENSDLAG00005031719) ENSDLAG00005031114 ENSDLAG00005033166 ENSDLAG00005010870 ENSDLAG00005030692 ywhaba (ENSDLAG00005010824) Large yellow croaker MODERN SPECIES 478 GPR37L1 (ENSLCRG00005020136) atp2b4 (ENSLCRG00005020232) ENSLCRG00005020448 cept1b (ENSLCRG00005020474) dram2b (ENSLCRG00005020552) ANGPT4 (ENSLCRG00005020616) ENSLCRG00005020796 ENSLCRG00005020807 cand2 (ENSLCRG00005020877) sec13 (ENSLCRG00005021200) ENSLCRG00005021280 rbl1 (ENSLCRG00005021384) ENSLCRG00005021558 psmf1 (ENSLCRG00005021567) pigu (ENSLCRG00005021665) mcm2 (ENSLCRG00005021884) #22 blcap (ENSLCRG00005021930) CHD6 (ENSLCRG00005022498) rspo4 (ENSLCRG00005023660) PTPRT (ENSLCRG00005023843) ENSLCRG00005023893 ENSLCRG00005023894 zgc:171566 (ENSLCRG00005023895) GRIP2 (ENSLCRG00005023898) slc6a6b (ENSLCRG00005023902) LSM3 (ENSLCRG00005023912) ENSLCRG00005023915 RIMS4 (ENSLCRG00005023916) YWHAB (ENSLCRG00005023917) tomm34 (ENSLCRG00005023918) ENSLCRG00005023920 Gilthead seabream MODERN SPECIES 20 dennd6aa (ENSSAUG00010022554) slmapa (ENSSAUG00010022524) FLNB (ENSSAUG00010016399) ENSSAUG00010016321 ENSSAUG00010016319 ENSSAUG00010016314 ENSSAUG00010016312 ENSSAUG00010016311 ENSSAUG00010016308 ENSSAUG00010016301 ENSSAUG00010016297 rbl1 (ENSSAUG00010015485) ENSSAUG00010015468 psmf1 (ENSSAUG00010015466) pigu (ENSSAUG00010015457) mcm2 (ENSSAUG00010015440) #22 ENSSAUG00010015438 #23 blcap (ENSSAUG00010015437) ripor3 (ENSSAUG00010015434) CHD6 (ENSSAUG00010014707) rspo4 (ENSSAUG00010014677) PTPRT (ENSSAUG00010001672) zgc:171566 (ENSSAUG00010001184) GRIP2 (ENSSAUG00010001085) slc6a6b (ENSSAUG00010000496) ENSSAUG00010000338 LSM3 (ENSSAUG00010000328) ENSSAUG00010000306 ENSSAUG00010000303 RIMS4 (ENSSAUG00010007649) YWHAB (ENSSAUG00010007643) Perciformes ANCESTRAL SPECIES ENSGT00940000161337.a.a.a.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Cottioidei ANCESTRAL SPECIES ENSGT00390000006044 ENSGT00390000005874.j ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ENSGT00530000063880.a ENSGT00950000183202.a.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 ENSGT00390000011228.b.a.e.a ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 Lumpfish MODERN SPECIES 20 cox6c (ENSCLMG00005019568) ENSCLMG00005019504 KCNS1 (ENSCLMG00005019503) ENSCLMG00005019502 ENSCLMG00005019500 ENSCLMG00005019499 ENSCLMG00005019498 matn4 (ENSCLMG00005019482) ENSCLMG00005019479 RBPJL (ENSCLMG00005019477) ENSCLMG00005019476 ENSCLMG00005019475 rbl1 (ENSCLMG00005018994) psmf1 (ENSCLMG00005018988) pigu (ENSCLMG00005018982) mcm2 (ENSCLMG00005018892) #22 blcap (ENSCLMG00005018891) ENSCLMG00005018889 ENSCLMG00005018887 CHD6 (ENSCLMG00005009283) rspo4 (ENSCLMG00005009209) ENSCLMG00005009208 PTPRT (ENSCLMG00005008937) aldh4a1 (ENSCLMG00005007771) ENSCLMG00005007760 ASCL5 (ENSCLMG00005007759) ENSCLMG00005007758 PIK3C2B (ENSCLMG00005003083) ENSCLMG00005004010 mkrn2 (ENSCLMG00005004009) ENSCLMG00005004008 Stickleback MODERN SPECIES 587 dynlrb2 (ENSGACG00000000011) ENSGACG00000000012 smpd4 (ENSGACG00000000013) DOCK3 (ENSGACG00000000014) cand2 (ENSGACG00000000015) cox6c (ENSGACG00000000016) ENSGACG00000000017 ENSGACG00000000018 KCNS1 (ENSGACG00000000019) ENSGACG00000000020 ENSGACG00000000021 matn4 (ENSGACG00000000022) ENSGACG00000000023 rbl1 (ENSGACG00000000024) psmf1 (ENSGACG00000000025) mcm2 (ENSGACG00000000027) #22 ENSGACG00000000030 ENSGACG00000000031 #23 blcap (ENSGACG00000000033) ripor3 (ENSGACG00000000035) CHD6 (ENSGACG00000000037) PTPRT (ENSGACG00000000039) Perciformes_a ANCESTRAL SPECIES 41 ENSGT00940000161337.a.a.a.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 Pike perch MODERN SPECIES 46 ENSSLUG00000012381 cox6c (ENSSLUG00000012374) ANGPT4 (ENSSLUG00000011967) ENSSLUG00000011928 ENSSLUG00000011920 ENSSLUG00000011914 cand2 (ENSSLUG00000010664) sec13 (ENSSLUG00000010459) ENSSLUG00000010428 dnase1l4.2 (ENSSLUG00000010416) ENSSLUG00000010397 rbl1 (ENSSLUG00000009964) TMEM74B (ENSSLUG00000009929) psmf1 (ENSSLUG00000009925) pigu (ENSSLUG00000009917) mcm2 (ENSSLUG00000009787) #22 ENSSLUG00000009745 #23 blcap (ENSSLUG00000009739) ripor3 (ENSSLUG00000009731) ENSSLUG00000005468 rspo4 (ENSSLUG00000004968) PTPRT (ENSSLUG00000004751) zgc:171566 (ENSSLUG00000004705) GRIP2 (ENSSLUG00000004685) slc6a6b (ENSSLUG00000004216) Channel bull blenny MODERN SPECIES 201 psmf1 (ENSCGOG00000005993) pigu (ENSCGOG00000005995) mcm2 (ENSCGOG00000006049) #22 ENSCGOG00000007102 ENSCGOG00000007104 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Anabantaria ANCESTRAL SPECIES ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Climbing perch MODERN SPECIES 18 ENSATEG00000006393 ENSATEG00000006331 ENSATEG00000006317 ENSATEG00000006283 ENSATEG00000025508 ENSATEG00000006259 ENSATEG00000006129 ENSATEG00000006068 ENSATEG00000006055 ENSATEG00000006049 ENSATEG00000005917 ENSATEG00000005897 ENSATEG00000005830 ENSATEG00000005765 ENSATEG00000005756 ENSATEG00000005658 #22 ENSATEG00000025482 #23 blcap (ENSATEG00000005651) ENSATEG00000005629 ENSATEG00000005608 ENSATEG00000005598 ENSATEG00000005438 ENSATEG00000005430 ENSATEG00000005329 GRIP2 (ENSATEG00000005261) ENSATEG00000005177 LSM3 (ENSATEG00000005153) ENSATEG00000005124 ENSATEG00000005100 ENSATEG00000005068 tomm34 (ENSATEG00000027534) Siamese fighting fish MODERN SPECIES 16 ccndbp1 (ENSBSLG00000009761) ENSBSLG00000009854 tomm34 (ENSBSLG00000009918) YWHAB (ENSBSLG00000009956) RIMS4 (ENSBSLG00000010044) ENSBSLG00000010064 LSM3 (ENSBSLG00000010073) ENSBSLG00000010116 GRIP2 (ENSBSLG00000011740) sec13 (ENSBSLG00000012434) ENSBSLG00000012461 rbl1 (ENSBSLG00000012532) TMEM74B (ENSBSLG00000012730) psmf1 (ENSBSLG00000012735) pigu (ENSBSLG00000012751) mcm2 (ENSBSLG00000012803) #22 ENSBSLG00000012908 #23 ENSBSLG00000012925 sec13 (ENSBSLG00000012974) dnase1l4.2 (ENSBSLG00000012984) ENSBSLG00000012990 rbl1 (ENSBSLG00000013014) TMEM74B (ENSBSLG00000013705) ENSBSLG00000013712 blcap (ENSBSLG00000013721) ripor3 (ENSBSLG00000014068) CHD6 (ENSBSLG00000014218) rspo4 (ENSBSLG00000014721) rspo4 (ENSBSLG00000014756) PTPRT (ENSBSLG00000014784) zgc:171566 (ENSBSLG00000016657) Zig-zag eel MODERN SPECIES 19 C1QA (ENSMAMG00000013566) ENSMAMG00000013589 ENSMAMG00000013499 ENSMAMG00000013525 ENSMAMG00000013490 ENSMAMG00000013482 ENSMAMG00000013474 ENSMAMG00000013447 ENSMAMG00000013444 ENSMAMG00000013427 ENSMAMG00000013369 ENSMAMG00000013318 ENSMAMG00000013306 ENSMAMG00000013292 ENSMAMG00000013240 ENSMAMG00000013179 #22 blcap (ENSMAMG00000013164) ENSMAMG00000013154 ENSMAMG00000013111 ENSMAMG00000013086 ENSMAMG00000027283 ENSMAMG00000013034 ENSMAMG00000013021 GRIP2 (ENSMAMG00000012888) ENSMAMG00000012821 LSM3 (ENSMAMG00000027704) ENSMAMG00000025253 ENSMAMG00000012777 ENSMAMG00000012756 tomm34 (ENSMAMG00000012740) ENSMAMG00000012702 Carangaria ANCESTRAL SPECIES 3 ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Carangaria_A ANCESTRAL SPECIES 58 ENSGT00940000160096 ENSGT00940000159787 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b Seriola ANCESTRAL SPECIES 79 ENSGT00940000160096 ENSGT00940000159787 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813.g ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00950000182846.a.a.b.a.b ENSGT00950000182846.a.a.b.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000163911.a.a.b.a.a.a.a.b.h ENSGT00940000163911.a.a.b.a.b.j ENSGT01100000263625.B ENSGT01030000235115.c ENSGT00940000158986 ENSGT01040000241001 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 Greater amberjack MODERN SPECIES 58 KCNS1 (ENSSDUG00000009952) ENSSDUG00000009917 cox6c (ENSSDUG00000009898) ENSSDUG00000009880 ENSSDUG00000009857 ANGPT4 (ENSSDUG00000009828) cand2 (ENSSDUG00000009736) sec13 (ENSSDUG00000009712) dnase1l4.2 (ENSSDUG00000009635) ENSSDUG00000009611 ENSSDUG00000009560 rbl1 (ENSSDUG00000009497) ENSSDUG00000009481 psmf1 (ENSSDUG00000009454) pigu (ENSSDUG00000009387) mcm2 (ENSSDUG00000009334) #22 ENSSDUG00000009313 #23 blcap (ENSSDUG00000009308) ripor3 (ENSSDUG00000009248) ENSSDUG00000009233 Yellowtail amberjack MODERN SPECIES 3216 STK4 (ENSSLDG00000005771) ENSSLDG00000005808 cox6c (ENSSLDG00000005824) ANGPT4 (ENSSLDG00000006007) ENSSLDG00000006471 cand2 (ENSSLDG00000006504) sec13 (ENSSLDG00000006564) ENSSLDG00000006594 dnase1l4.2 (ENSSLDG00000006623) ENSSLDG00000006645 ENSSLDG00000006696 rbl1 (ENSSLDG00000006727) ENSSLDG00000006789 psmf1 (ENSSLDG00000006804) pigu (ENSSLDG00000006823) mcm2 (ENSSLDG00000006844) #22 blcap (ENSSLDG00000006886) ripor3 (ENSSLDG00000006901) ENSSLDG00000006963 ENSSLDG00000006978 ENSSLDG00000006990 ENSSLDG00000007038 Barramundi perch MODERN SPECIES 268 cand2 (ENSLCAG00010010323) sec13 (ENSLCAG00010010550) dnase1l4.2 (ENSLCAG00010010583) ENSLCAG00010010589 rbl1 (ENSLCAG00010010623) ENSLCAG00010010776 pigu (ENSLCAG00010010779) psmf1 (ENSLCAG00010010788) ENSLCAG00010010791 ENSLCAG00010010793 mcm2 (ENSLCAG00010010878) #22 ENSLCAG00010011394 blcap (ENSLCAG00010011404) ripor3 (ENSLCAG00010011409) CHD6 (ENSLCAG00010011649) rspo4 (ENSLCAG00010012991) PTPRT (ENSLCAG00010013037) Pleuronectoidei ANCESTRAL SPECIES 31 ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b ENSGT00940000160096 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00720000109813 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c Tongue sole MODERN SPECIES 2 rbm39a (ENSCSEG00000020394) tsen2 (ENSCSEG00000020407) MKRN2OS (ENSCSEG00000020411) mkrn2 (ENSCSEG00000020415) ENSCSEG00000020423 PIK3C2B (ENSCSEG00000020431) ENSCSEG00000020442 CHST15 (ENSCSEG00000020445) aldh4a1 (ENSCSEG00000020448) RNF123 (ENSCSEG00000020456) AMIGO3 (ENSCSEG00000020465) psmf1 (ENSCSEG00000020469) tma7 (ENSCSEG00000020472) slmapa (ENSCSEG00000020484) ENSCSEG00000020757 mcm2 (ENSCSEG00000020768) #22 cyc1 (ENSCSEG00000020779) smpd4 (ENSCSEG00000020794) pigu (ENSCSEG00000000428) ccdc51 (ENSCSEG00000000439) Turbot MODERN SPECIES 18 mych (ENSSMAG00000024502) romo1 (ENSSMAG00000002225) ergic3 (ENSSMAG00000002145) ENSSMAG00000002115 cyc1 (ENSSMAG00000002094) ENSSMAG00000037016 raly (ENSSMAG00000001107) ENSSMAG00000001134 ahcy (ENSSMAG00000001148) ENSSMAG00000001174 ENSSMAG00000001196 ENSSMAG00000001211 ENSSMAG00000033180 ENSSMAG00000001221 ENSSMAG00000001234 ENSSMAG00000001283 #22 ENSSMAG00000001364 #23 blcap (ENSSMAG00000001391) ENSSMAG00000001403 ENSSMAG00000029660 ENSSMAG00000001453 ENSSMAG00000001528 ENSSMAG00000036804 ENSSMAG00000001575 ENSSMAG00000001646 ENSSMAG00000036970 GRIP2 (ENSSMAG00000001664) ENSSMAG00000001779 LSM3 (ENSSMAG00000037919) ENSSMAG00000034190 ENSSMAG00000001844 Cod MODERN SPECIES 4 ENSGMOG00000020267 or90a1 (ENSGMOG00000036460) ENSGMOG00000032011 ENSGMOG00000009447 ENSGMOG00000022904 KCNS1 (ENSGMOG00000009434) ENSGMOG00000009422 ENSGMOG00000009416 ENSGMOG00000036758 ENSGMOG00000016530 ENSGMOG00000016515 ENSGMOG00000016476 ENSGMOG00000030069 ENSGMOG00000011628 ENSGMOG00000011636 ENSGMOG00000011681 #22 ENSGMOG00000025916 #23 blcap (ENSGMOG00000020157) ENSGMOG00000011700 ENSGMOG00000011715 ENSGMOG00000034789 ENSGMOG00000001119 ENSGMOG00000005084 GRIP2 (ENSGMOG00000029861) ENSGMOG00000001938 LSM3 (ENSGMOG00000011024) ENSGMOG00000033940 ENSGMOG00000011031 ENSGMOG00000012246 tomm34 (ENSGMOG00000011260) ENSGMOG00000011248 Protacanthopterygii ANCESTRAL SPECIES 98 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.b ENSGT00940000165535 ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a ENSGT00950000182846.a.a.b.b ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000017740.a.b ENSGT00940000158890.h ENSGT00940000163873.c.b ENSGT00440000038003 ENSGT00940000165085.b ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000007160.a.a ENSGT00940000160561 ENSGT00940000159711.g ENSGT00390000008429.e.a ENSGT00390000001505 ENSGT01030000234648.a.a.c.a.g Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 101 ENSGT00390000015021 ENSGT00940000159891.d ENSGT00390000002689.g ENSGT00940000161168.i ENSGT00390000010463.a.a.a.a.e ENSGT01030000234528.B.b.a.a.a.c.b.u.b ENSGT01030000234528.B.b.a.a.a.c.b.u.a ENSGT00940000168601.c.b ENSGT00940000156629.a.b ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k.d ENSGT01090000260174.c ENSGT00940000161090.B.c.b.b.a.a ENSGT00950000182846.a.a.b.a ENSGT00940000164287.f ENSGT01050000244824.F.e #22 ENSGT00730000111323.f #23 ENSGT00490000043388.b.a.o ENSGT00940000154583.e.b.b.a.b ENSGT00940000155615.i.a.b ENSGT00940000153393.B.h ENSGT00390000017740.a.b ENSGT00940000158890.h.b ENSGT00440000038003 ENSGT00940000165085.b.b ENSGT00390000005874.j ENSGT00940000155514.c.c.b ENSGT00390000007160.a.a.o ENSGT00940000160561.ab ENSGT00940000159711.g.f ENSGT00390000008429.e.a.e Huchen MODERN SPECIES 2148 ENSHHUG00000007621 smarcd1 (ENSHHUG00000007432) gpd1b (ENSHHUG00000007353) cers5 (ENSHHUG00000007316) ENSHHUG00000007198 ENSHHUG00000007182 dnase1l4.2 (ENSHHUG00000007112) ccdc51 (ENSHHUG00000007107) mcm2 (ENSHHUG00000007073) #22 ENSHHUG00000007068 #23 zgc:171566 (ENSHHUG00000007034) Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00390000002689.g ENSGT00940000161168.i ENSGT00390000010463.a.a.a.a.e ENSGT01030000234528.B.b.a.a.a.c.b.u.b ENSGT01030000234528.B.b.a.a.a.c.b.u.a ENSGT00940000165535.e ENSGT00940000164727.db.a ENSGT00940000156629.a.b ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k.d ENSGT01090000260174.c ENSGT00940000161090.B.c.b.b.a.a ENSGT00950000182846.a.a.b.a ENSGT00940000176379.a ENSGT00940000164287.f ENSGT01050000244824.F.e #22 ENSGT00730000111323.f #23 ENSGT00490000043388.b.a.o ENSGT00390000013951 ENSGT00940000154583.e.b.b.a.a ENSGT00940000155615.i.a.a ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000154583.e.b.b.a.b ENSGT00940000155615.i.a.b ENSGT00940000153393.B.h ENSGT00390000017740.a.b ENSGT00940000158890.h.b ENSGT00440000038003 ENSGT00940000165085.b.b ENSGT00390000005874.j ENSGT00940000155514.c.c.b Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00390000002689.g ENSGT00940000161168.i ENSGT00390000010463.a.a.a.a.e ENSGT01030000234528.B.b.a.a.a.c.b.u.b ENSGT01030000234528.B.b.a.a.a.c.b.u.a ENSGT00940000165535.e ENSGT00940000164727.db.a ENSGT00940000156629.a.b ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k.d ENSGT01090000260174.c ENSGT00940000161090.B.c.b.b.a.a ENSGT00950000182846.a.a.b.a ENSGT00940000176379.a ENSGT00940000164287.f ENSGT01050000244824.F.e.a #22 ENSGT00730000111323.f #23 ENSGT00490000043388.b.a.o ENSGT00950000184126 ENSGT00940000153393.B.h ENSGT00390000017740.a.b ENSGT00940000158890.h.b ENSGT00440000038003 ENSGT00390000005874.j ENSGT00940000155514.c.c.b ENSGT00390000007160.a.a.o ENSGT00940000160561.ab ENSGT00940000159711.g.f ENSGT00390000008429.e.a.e ENSGT00950000183146.b.b.d ENSGT00940000158813.a.a.b Oncorhynchus_a ANCESTRAL SPECIES 54 ENSGT00390000015021 ENSGT00940000159891.d ENSGT00940000161168.i ENSGT00390000010463.a.a.a.a.e ENSGT01030000234528.B.b.a.a.a.c.b.u.b ENSGT01030000234528.B.b.a.a.a.c.b.u.a ENSGT00940000165535.e ENSGT00940000164727.db.a ENSGT00940000156629.a.b ENSGT00390000003114.e.a.b ENSGT00940000169926.a ENSGT01090000260174.c ENSGT00940000161090.B.c.b.b.a.a ENSGT00950000182846.a.a.b.a ENSGT00940000164287.f ENSGT01050000244824.F.e.a #22 ENSGT00730000111323.f #23 ENSGT00490000043388.b.a.o ENSGT00950000184126 ENSGT00940000153393.B.h ENSGT00390000017740.a.b ENSGT00940000158890.h.b.a ENSGT00940000158890.h.b.b ENSGT00440000038003 ENSGT00390000005874.j ENSGT00940000155514.c.c.b ENSGT00390000007160.a.a.o ENSGT00940000160561.ab ENSGT00940000159711.g.f ENSGT00390000008429.e.a.e ENSGT00950000183146.b.b.d Coho salmon MODERN SPECIES ITGA7 (ENSOKIG00005019140) ENSOKIG00005019100 GLS2 (ENSOKIG00005018748) ENSOKIG00005018711 CELA1 (ENSOKIG00005018672) ENSOKIG00005018138 ENSOKIG00005018130 ENSOKIG00005018122 ENSOKIG00005017949 smarcd1 (ENSOKIG00005017726) ENSOKIG00005017692 ENSOKIG00005017656 dnase1l4.2 (ENSOKIG00005017638) gpd1b (ENSOKIG00005017558) ENSOKIG00005017534 MCM2 (ENSOKIG00005017128) #22 ENSOKIG00005017105 #23 ENSOKIG00005017098 zgc:171566 (ENSOKIG00005017086) ENSOKIG00005017059 ENSOKIG00005017055 ENSOKIG00005017045 ENSOKIG00005017042 ENSOKIG00005016829 ENSOKIG00005016787 GRIP2 (ENSOKIG00005011407) ENSOKIG00005011182 sec13 (ENSOKIG00005011074) cand2 (ENSOKIG00005009619) rpl32 (ENSOKIG00005009537) ENSOKIG00005009522 Chinook salmon MODERN SPECIES 11 DOCK3 (ENSOTSG00005004638) manf (ENSOTSG00005004628) rbm15b (ENSOTSG00005004627) ENSOTSG00005004624 AMIGO3 (ENSOTSG00005004623) ENSOTSG00005004622 GRM7 (ENSOTSG00005004621) ENSOTSG00005004618 SMARCD1 (ENSOTSG00005004274) gpd1b (ENSOTSG00005004201) ENSOTSG00005004194 ENSOTSG00005004190 ENSOTSG00005004188 dnase1l4.2 (ENSOTSG00005004183) ccdc51 (ENSOTSG00005004176) mcm2 (ENSOTSG00005003900) #22 zgc:171566 (ENSOTSG00005003894) LSM3 (ENSOTSG00005003892) ENSOTSG00005003890 rpl32 (ENSOTSG00005003887) cand2 (ENSOTSG00005002395) sec13 (ENSOTSG00005002355) igsf8 (ENSOTSG00005002347) ENSOTSG00005002341 ENSOTSG00005002316 ENSOTSG00005002310 gls2b (ENSOTSG00005002305) CELA1 (ENSOTSG00005001148) CELA1 (ENSOTSG00005001112) ENSOTSG00005001106 ENSOTSG00005001103 Rainbow trout MODERN SPECIES 8 gls2b (ENSOMYG00000029215) ENSOMYG00000060523 ENSOMYG00000029112 ENSOMYG00000056096 ENSOMYG00000049787 ENSOMYG00000049086 asic1b (ENSOMYG00000032449) smarcd1 (ENSOMYG00000032432) gpd1b (ENSOMYG00000032387) cers5 (ENSOMYG00000075255) ENSOMYG00000027870 ENSOMYG00000072396 dnsl3 (ENSOMYG00000032287) ENSOMYG00000032261 ccdc51 (ENSOMYG00000032259) mcm2 (ENSOMYG00000031800) #22 ENSOMYG00000031634 #23 zgc:171566 (ENSOMYG00000031594) ENSOMYG00000055231 ENSOMYG00000055980 cand2 (ENSOMYG00000030716) rpl32 (ENSOMYG00000028139) ENSOMYG00000066629 ENSOMYG00000061470 ENSOMYG00000057567 ENSOMYG00000064291 ENSOMYG00000032724 DOCK3 (ENSOMYG00000032548) ENSOMYG00000065223 manf (ENSOMYG00000069831) rbm15b (ENSOMYG00000032495) Oncorhynchus ANCESTRAL SPECIES 72 ENSGT01050000244866.D.a.e.a.b ENSGT00940000177988 ENSGT00390000002689.h.a.a ENSGT00940000161168.j ENSGT00390000010463.a.a.a.a.f ENSGT00940000165535.d ENSGT00940000168601.c.a.b ENSGT00940000156629.a.a ENSGT01030000234515.a.a.a.k.c ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.b ENSGT00950000182846.a.a.b.b ENSGT00940000168313 ENSGT00940000164287.e ENSGT01050000244824.F.e.b #22 ENSGT00730000111323.e #23 ENSGT00490000043388.b.a.p ENSGT00390000013951.jd ENSGT00940000154583.e.b.b.a.a ENSGT00940000155615.i.a.a ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000153393.B.g ENSGT00940000158890.h.a ENSGT00940000163873.c.b ENSGT00940000165085.b.a ENSGT00940000155514.c.c.a ENSGT00390000007160.a.a.p ENSGT00940000160561.`b ENSGT00940000159711.g.e ENSGT00390000008429.e.a.f Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000157009.c.b ENSGT00950000183066.a.b.a.b.l.d ENSGT00390000002689.h.a.a ENSGT00940000161168.j ENSGT00390000010463.a.a.a.a.f ENSGT00940000165535.d ENSGT00940000168601.c.a.b ENSGT00940000156629.a.a ENSGT01030000234515.a.a.a.k.c ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.b ENSGT00950000182846.a.a.b.b ENSGT00940000171889 ENSGT00940000164287.e ENSGT01050000244824.F.e.b #22 ENSGT00730000111323.e #23 ENSGT00390000013951.jd ENSGT00940000154583.e.b.b.a.a ENSGT00940000155615.i.a.a ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000153393.B.g ENSGT00940000158890.h.a ENSGT00940000163873.c.b ENSGT00940000165085.b.a ENSGT00940000155514.c.c.a ENSGT00390000007160.a.a.p ENSGT00940000160561.`b ENSGT00940000159711.g.e ENSGT00390000008429.e.a.f ENSGT00390000001505 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 ENSOTSG00005004333 ITGA7 (ENSOTSG00005002629) bloc1s1 (ENSOTSG00005002607) rdh5 (ENSOTSG00005002601) gls2b (ENSOTSG00005001488) ENSOTSG00005001302 ENSOTSG00005001193 smarcd1 (ENSOTSG00005001073) cers5 (ENSOTSG00005001046) ENSOTSG00005027009 BCDIN3D (ENSOTSG00005027007) ENSOTSG00005027005 dnase1l4.1 (ENSOTSG00005027002) ENSOTSG00005027001 ccdc51 (ENSOTSG00005027000) mcm2 (ENSOTSG00005026998) #22 ENSOTSG00005026997 #23 LSM3 (ENSOTSG00005026996) ENSOTSG00005026988 ENSOTSG00005026986 GRIP2 (ENSOTSG00005026979) ENSOTSG00005026976 ANKRD60 (ENSOTSG00005026973) ENSOTSG00005026955 rab22a (ENSOTSG00005026948) ENSOTSG00005026947 vapb (ENSOTSG00005026944) APCDD1L (ENSOTSG00005026942) ENSOTSG00005026940 SRC (ENSOTSG00005026474) ENSOTSG00005026461 Chinook salmon MODERN SPECIES 2920 ENSOTSG00005030617 ITGA7 (ENSOTSG00005030627) bloc1s1 (ENSOTSG00005032588) rdh5 (ENSOTSG00005032590) gls2b (ENSOTSG00005032595) ENSOTSG00005032620 ENSOTSG00005032622 smarcd1 (ENSOTSG00005032624) cers5 (ENSOTSG00005032654) ENSOTSG00005032656 BCDIN3D (ENSOTSG00005032657) ENSOTSG00005032658 dnase1l4.1 (ENSOTSG00005032664) ENSOTSG00005032672 ccdc51 (ENSOTSG00005032674) mcm2 (ENSOTSG00005032681) #22 ENSOTSG00005032716 #23 LSM3 (ENSOTSG00005032719) ENSOTSG00005032722 ENSOTSG00005032725 GRIP2 (ENSOTSG00005032728) ENSOTSG00005032731 Coho salmon MODERN SPECIES 25 ITGA7 (ENSOKIG00005002324) bloc1s1 (ENSOKIG00005002625) rdh5 (ENSOKIG00005002638) gls2b (ENSOKIG00005002739) ENSOKIG00005003434 ENSOKIG00005003435 ENSOKIG00005003442 ENSOKIG00005003447 ENSOKIG00005003499 SMARCD1 (ENSOKIG00005003707) cers5 (ENSOKIG00005003924) ENSOKIG00005003953 ENSOKIG00005003959 dnase1l4.1 (ENSOKIG00005003981) ENSOKIG00005004037 mcm2 (ENSOKIG00005004073) #22 LSM3 (ENSOKIG00005004219) ENSOKIG00005004225 ENSOKIG00005004314 ENSOKIG00005004522 GRIP2 (ENSOKIG00005004775) ENSOKIG00005009283 sec13 (ENSOKIG00005009338) rpl32 (ENSOKIG00005009374) ENSOKIG00005009392 ENSOKIG00005009435 DOCK3 (ENSOKIG00005009589) ENSOKIG00005011918 ENSOKIG00005011951 manf (ENSOKIG00005011974) rbm15b (ENSOKIG00005011984) Rainbow trout MODERN SPECIES 28 gls2b (ENSOMYG00000030014) ENSOMYG00000030008 ENSOMYG00000050503 ENSOMYG00000051033 ENSOMYG00000056542 ENSOMYG00000062884 ENSOMYG00000029990 cers5 (ENSOMYG00000075534) ENSOMYG00000035065 ENSOMYG00000035072 ENSOMYG00000035059 dnase1l4.1 (ENSOMYG00000073690) dnase1l4.1 (ENSOMYG00000034990) ENSOMYG00000034925 ccdc51 (ENSOMYG00000064669) mcm2 (ENSOMYG00000033325) #22 ENSOMYG00000033062 #23 zgc:171566 (ENSOMYG00000033030) LSM3 (ENSOMYG00000033020) ENSOMYG00000071683 ENSOMYG00000033005 GRIP2 (ENSOMYG00000066525) ENSOMYG00000065048 ENSOMYG00000035109 sec13 (ENSOMYG00000035210) ENSOMYG00000055767 rpl32 (ENSOMYG00000035278) ENSOMYG00000035309 ENSOMYG00000063564 DOCK3 (ENSOMYG00000002166) ENSOMYG00000071478 Salmo ANCESTRAL SPECIES 33 ENSGT00390000002689.g ENSGT00940000161168.i ENSGT00390000010463.a.a.a.a.e ENSGT01030000234528.B.b.a.a.a.c.b.u.b ENSGT01030000234528.B.b.a.a.a.c.b.u.a ENSGT00940000165535.e ENSGT00940000164727.db.a ENSGT00940000156629.a.b ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a.k.d ENSGT01090000260174.c ENSGT00940000161090.B.c.b.b.a.a ENSGT00950000182846.a.a.b.a ENSGT00940000176379.a ENSGT00940000164287.f ENSGT01050000244824.F.e #22 ENSGT00730000111323.f #23 ENSGT00490000043388.b.a.o ENSGT00390000013951 ENSGT00940000154583.e.b.b.a.b ENSGT00940000155615.i.a.b ENSGT00940000153393.B.h ENSGT00390000017740.a.b ENSGT00940000158890.h.b ENSGT00440000038003 ENSGT00940000165085.b.b ENSGT00940000165085.a ENSGT00390000005874.j ENSGT00940000155514.c.c.b ENSGT00390000007160.a.a.o ENSGT00940000160561.ab River trout MODERN SPECIES 5 gls2b (ENSSTUG00000016763) ENSSTUG00000016735 CELA1 (ENSSTUG00000016694) ENSSTUG00000016682 ENSSTUG00000016678 asic1b (ENSSTUG00000016407) smarcd1 (ENSSTUG00000016029) gpd1b (ENSSTUG00000015795) cers5 (ENSSTUG00000015768) ENSSTUG00000015759 ENSSTUG00000015745 dnase1l4.2 (ENSSTUG00000015701) ENSSTUG00000015674 ENSSTUG00000015665 ccdc51 (ENSSTUG00000015661) mcm2 (ENSSTUG00000015273) #22 ENSSTUG00000015217 #23 zgc:171566 (ENSSTUG00000015204) LSM3 (ENSSTUG00000015178) ENSSTUG00000013971 ENSSTUG00000013938 ENSSTUG00000013926 GRIP2 (ENSSTUG00000009540) sec13 (ENSSTUG00000009381) cand2 (ENSSTUG00000008322) rpl32 (ENSSTUG00000008287) ENSSTUG00000008279 ENSSTUG00000008271 ENSSTUG00000008262 ENSSTUG00000008255 DCAF1 (ENSSTUG00000008140) Atlantic salmon MODERN SPECIES 3 gls2b (ENSSSAG00000055116) ENSSSAG00000087837 ENSSSAG00000055002 ENSSSAG00000055016 ENSSSAG00000120768 ENSSSAG00000087361 asic1b (ENSSSAG00000047167) smarcd1 (ENSSSAG00000043397) gpd1b (ENSSSAG00000043162) cers5 (ENSSSAG00000067468) CL062 (ENSSSAG00000043016) ENSSSAG00000108536 dnase1l4.2 (ENSSSAG00000042975) ccdc51 (ENSSSAG00000082299) ENSSSAG00000108862 MCM2 (ENSSSAG00000042717) #22 ENSSSAG00000042697 #23 zgc:171566 (ENSSSAG00000042676) ENSSSAG00000042655 ENSSSAG00000039620 ENSSSAG00000006160 sec13 (ENSSSAG00000106589) cand2 (ENSSSAG00000106568) ENSSSAG00000119644 rpl32 (ENSSSAG00000087271) ENSSSAG00000062932 ENSSSAG00000062654 ENSSSAG00000054650 ENSSSAG00000065584 manf (ENSSSAG00000107019) pcbp4 (ENSSSAG00000053929) Salmoninae ANCESTRAL SPECIES 322 ENSGT01030000234515.a.a.a.k.c ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.b ENSGT00950000182846.a.a.b.b ENSGT00940000168313 ENSGT00940000164287.e ENSGT01050000244824.F.f #22 ENSGT00730000111323.e #23 ENSGT00490000043388.b.a.p ENSGT00390000013951 ENSGT00940000154583.e.b.b.a.a ENSGT00940000155615.i.a.a ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000153393.B.g ENSGT00940000158890.h.a ENSGT00940000163873.c.b ENSGT00940000165085.b.a ENSGT00940000155514.c.c.a ENSGT00390000007160.a.a.p ENSGT00940000160561.`b ENSGT00940000159711.g.e ENSGT00390000008429.e.a.f Salmoninae_a ANCESTRAL SPECIES 152 ENSGT00940000159891.c ENSGT00390000002689.h ENSGT00940000161168.j ENSGT00390000010463.a.a.a.a.f ENSGT01030000234528.B.b.a.a.a.c.b.v ENSGT00940000165535.d ENSGT00940000168601.c.a.b ENSGT00940000156629.a.a ENSGT01030000234515.a.a.a.k.c ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.b ENSGT00950000182846.a.a.b.b ENSGT00940000168313 ENSGT00940000164287.e ENSGT01050000244824.F.f #22 ENSGT00730000111323.e #23 ENSGT00490000043388.b.a.p Salmo ANCESTRAL SPECIES 61 ENSGT00940000159891.c ENSGT00390000002689.h ENSGT00940000161168.j ENSGT00390000010463.a.a.a.a.f ENSGT01030000234528.B.b.a.a.a.c.b.v ENSGT00940000165535.d ENSGT00940000168601.d ENSGT00940000156629.a.a ENSGT01030000234515.a.a.a.k.c ENSGT01090000260174.d ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.b ENSGT00950000182846.a.a.b.b ENSGT00940000176379.b ENSGT00940000164287.e ENSGT01050000244824.F.f #22 ENSGT00730000111323.e #23 ENSGT00490000043388.b.a.p ENSGT00940000154583.e.b.b.a.a ENSGT00940000155615.i.a.a ENSGT01060000248575.D.c.b.b.a.m.b.b.a ENSGT00940000153393.B.g ENSGT00940000158890.h.a ENSGT00940000163873.c.b ENSGT00940000165085.b.a ENSGT00940000155514.c.c.a ENSGT00390000007160.a.a.p ENSGT00940000160561.`b ENSGT00940000159711.g.e ENSGT01060000250309.c ENSGT00990000212314 River trout MODERN SPECIES 7 ENSSTUG00000018204 ENSSTUG00000018192 ENSSTUG00000018188 ENSSTUG00000018181 ENSSTUG00000018177 ENSSTUG00000018086 smarcd1 (ENSSTUG00000017777) ENSSTUG00000017751 cers5 (ENSSTUG00000017612) BCDIN3D (ENSSTUG00000017749) ENSSTUG00000017602 dnase1l4.1 (ENSSTUG00000017594) dnase1l4.1 (ENSSTUG00000017592) ENSSTUG00000017584 ccdc51 (ENSSTUG00000017580) mcm2 (ENSSTUG00000017472) #22 zgc:171566 (ENSSTUG00000017413) ENSSTUG00000017400 #23 ENSSTUG00000015292 ENSSTUG00000015181 ENSSTUG00000015151 GRIP2 (ENSSTUG00000015022) ENSSTUG00000014977 ENSSTUG00000014974 ENSSTUG00000014969 sec13 (ENSSTUG00000014944) rpl32 (ENSSTUG00000014905) ENSSTUG00000014885 ENSSTUG00000014815 DOCK3 (ENSSTUG00000004144) manf (ENSSTUG00000003628) Atlantic salmon MODERN SPECIES 14 RDH5 (ENSSSAG00000073617) gls2b (ENSSSAG00000071268) ENSSSAG00000086986 ENSSSAG00000071023 smarcd1 (ENSSSAG00000067559) cers5 (ENSSSAG00000043031) ENSSSAG00000110229 ENSSSAG00000042994 ENSSSAG00000106190 ENSSSAG00000105877 dnase1l4.1 (ENSSSAG00000090871) dnase1l4.1 (ENSSSAG00000067463) dnase1l4.1 (ENSSSAG00000042104) dnase1l4.1 (ENSSSAG00000010981) ENSSSAG00000117722 ENSSSAG00000078605 #22 ENSSSAG00000078558 #23 zgc:171566 (ENSSSAG00000078536) LSM3 (ENSSSAG00000078534) ENSSSAG00000090074 ENSSSAG00000078396 GRIP2 (ENSSSAG00000076971) ENSSSAG00000076912 ENSSSAG00000113964 sec13 (ENSSSAG00000008770) rpl32 (ENSSSAG00000048749) ENSSSAG00000008683 ENSSSAG00000008666 DOCK3 (ENSSSAG00000079345) manf (ENSSSAG00000079178) rbm15b (ENSSSAG00000079177) Huchen MODERN SPECIES 2541 ENSHHUG00000051387 ENSHHUG00000051389 BCDIN3D (ENSHHUG00000051392) ENSHHUG00000051394 dnase1l4.1 (ENSHHUG00000051401) ENSHHUG00000051418 ccdc51 (ENSHHUG00000051426) mcm2 (ENSHHUG00000051435) #22 ENSHHUG00000051602 #23 ENSHHUG00000051606 LSM3 (ENSHHUG00000051607) Northern pike MODERN SPECIES 16 gls2b (ENSELUG00000019242) rdh5 (ENSELUG00000019207) bloc1s1 (ENSELUG00000027972) ITGA7 (ENSELUG00000019180) ENSELUG00000019127 ENSELUG00000019134 dnase1l4.1 (ENSELUG00000019112) ENSELUG00000028682 ccdc51 (ENSELUG00000019018) mcm2 (ENSELUG00000019000) #22 ENSELUG00000018971 #23 zgc:171566 (ENSELUG00000018957) lsm3 (ENSELUG00000018922) SLC6A6 (ENSELUG00000018892) GRIP2 (ENSELUG00000018842) ENSELUG00000018777 sec13 (ENSELUG00000018648) cand2 (ENSELUG00000018618) rpl32 (ENSELUG00000030440) SSUH2 (ENSELUG00000018514) ENSELUG00000018500 ENSELUG00000018480 ENSELUG00000028334 DCAF1 (ENSELUG00000018442) DOCK3 (ENSELUG00000018356) Otomorpha ANCESTRAL SPECIES 29 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.d ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.d ENSGT00950000182846.a.a.b.a.c ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00940000155514.c ENSGT00390000007160.a.a ENSGT00940000160561 Otophysi ANCESTRAL SPECIES 2 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.d ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.d ENSGT00940000166028 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00940000155514.c ENSGT00390000007160.a.a ENSGT00940000160561 Characiphysae ANCESTRAL SPECIES 5 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.d ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.d ENSGT00950000182846.a.a.b.a.c ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00940000155514.c ENSGT00390000007160.a.a Channel catfish MODERN SPECIES 13 gls2b (ENSIPUG00000009764) tmprss12 (ENSIPUG00000009741) ENSIPUG00000009731 ENSIPUG00000009724 asic1 (ENSIPUG00000009680) smarcd1 (ENSIPUG00000009660) gpd1 (ENSIPUG00000009634) CERS5 (ENSIPUG00000009566) ENSIPUG00000009553 bcdin3d (ENSIPUG00000009539) ENSIPUG00000009514 dnase1l4.2 (ENSIPUG00000009506) ENSIPUG00000009381 ENSIPUG00000009357 ccdc51 (ENSIPUG00000009350) mcm2 (ENSIPUG00000009302) #22 podxl2 (ENSIPUG00000009274) #23 Ggh (ENSIPUG00000009249) ENSIPUG00000009238 lsm3 (ENSIPUG00000009207) slc6a6b (ENSIPUG00000009147) GRIP2 (ENSIPUG00000008974) sec13 (ENSIPUG00000008812) cand2 (ENSIPUG00000008700) rpl32 (ENSIPUG00000008634) ENSIPUG00000008605 ENSIPUG00000008562 ENSIPUG00000008545 ENSIPUG00000008535 DOCK3 (ENSIPUG00000008398) MANF (ENSIPUG00000008352) Characiphysae_b ANCESTRAL SPECIES 8 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a.c.a ENSGT01030000234528.B.b.a.a.a.d.a ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.d ENSGT00950000182846.a.a.b.a.c ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00940000155514.c ENSGT00390000007160.a.a Characoidei ANCESTRAL SPECIES 100 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.d ENSGT00950000182846.a.a.b.a.c ENSGT00940000166028 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 ENSGT00940000165085 ENSGT00940000155514.c ENSGT00390000007160.a.a Red-bellied piranha MODERN SPECIES 608 smarcd1 (ENSPNAG00000003757) gpd1b (ENSPNAG00000023170) cers5 (ENSPNAG00000023206) ENSPNAG00000023234 BCDIN3D (ENSPNAG00000023242) ENSPNAG00000003763 dnase1l4.2 (ENSPNAG00000023285) tma7 (ENSPNAG00000023323) ENSPNAG00000023363 ccdc51 (ENSPNAG00000023375) mcm2 (ENSPNAG00000023422) #22 ENSPNAG00000023434 #23 zgc:171566 (ENSPNAG00000023440) LSM3 (ENSPNAG00000023467) Mexicana tetra MODERN SPECIES 14 PLCH2 (ENSAMXG00000006425) ENSAMXG00000024789 LACTBL1 (ENSAMXG00000004600) ENSAMXG00000043590 ENSAMXG00000029622 smarcd1 (ENSAMXG00000004577) gpd1b (ENSAMXG00000029979) cers5 (ENSAMXG00000004553) ENSAMXG00000025806 BCDIN3D (ENSAMXG00000004546) ENSAMXG00000038993 dnase1l4.2 (ENSAMXG00000036786) ENSAMXG00000030524 tma7 (ENSAMXG00000004518) ccdc51 (ENSAMXG00000039839) mcm2 (ENSAMXG00000004474) #22 zgc:171566 (ENSAMXG00000031950) LSM3 (ENSAMXG00000041214) slc6a6b (ENSAMXG00000004425) GRIP2 (ENSAMXG00000004381) sec13 (ENSAMXG00000004356) cand2 (ENSAMXG00000032469) rpl32 (ENSAMXG00000043771) ENSAMXG00000043820 ssuh2.4 (ENSAMXG00000031934) ENSAMXG00000004300 ENSAMXG00000043899 DOCK3 (ENSAMXG00000004203) manf (ENSAMXG00000040494) rbm15b (ENSAMXG00000025805) pcbp4 (ENSAMXG00000033125) Electric eel MODERN SPECIES 356 ENSEEEG00000023638 BCDIN3D (ENSEEEG00000023637) ENSEEEG00000023635 dnase1l4.2 (ENSEEEG00000023633) ENSEEEG00000023632 ENSEEEG00000023631 ccdc51 (ENSEEEG00000023629) mcm2 (ENSEEEG00000023589) #22 zgc:171566 (ENSEEEG00000023578) LSM3 (ENSEEEG00000023576) slc6a6b (ENSEEEG00000023351) GRIP2 (ENSEEEG00000023313) sec13 (ENSEEEG00000023311) cand2 (ENSEEEG00000023309) RPL32 (ENSEEEG00000023305) ENSEEEG00000023301 ssuh2.4 (ENSEEEG00000023299) ENSEEEG00000023295 ENSEEEG00000023291 mpst (ENSEEEG00000023290) ENSEEEG00000023288 mief1 (ENSEEEG00000023286) napsa (ENSEEEG00000023282) Cyprinoidei ANCESTRAL SPECIES 96 ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.b.a.b.b.b.b.b.b.a.a.a.a.b ENSGT01030000234528.B.b.a.a.a.d.c ENSGT00940000168601 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00940000163467.a.b.b.b.a.a ENSGT00950000182846.a.a.b.a.d ENSGT00950000182846.a.a.b.b ENSGT00940000166028 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT01050000244806.b.a.b.c.a.a.b.b ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a ENSGT01050000244887.B ENSGT00500000044945.a ENSGT01030000234515.b ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000154779.a.a.d ENSGT00940000165007.b ENSGT00940000158364.b ENSGT00940000162148 ENSGT00940000160775 ENSGT00940000163917.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 808 ENSGT01030000234515.a.a.a.m.a ENSGT01090000260194.a ENSGT00940000161090.B.c.b.b.a.f ENSGT00950000182846.a.a.b.a.d.a ENSGT00950000182846.a.a.b.b.k.b ENSGT00940000166028 ENSGT00940000164287.a.b ENSGT01050000244824.F.g #22 ENSGT00730000111323.g.b #23 Cyprininae_a ANCESTRAL SPECIES 1025 ENSGT01050000244824.F.g #22 ENSGT00730000111323.g.b #23 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 369 dnase1l4.2 (ENSSGRG00000045800) dnase1l4.1 (ENSSGRG00000045806) mcm2 (ENSSGRG00000045827) #22 ENSSGRG00000046122 zgc:171566 (ENSSGRG00000046124) ENSSGRG00000046126 ENSSGRG00000046128 zgc:194627 (ENSSGRG00000046129) MYO9B (ENSSGRG00000046133) s1pr4 (ENSSGRG00000046161) ncln (ENSSGRG00000046162) CERS1 (ENSSGRG00000046194) tnfaip8l1 (ENSSGRG00000046195) mydgf (ENSSGRG00000046200) loxl5a (ENSSGRG00000046202) mibp (ENSSGRG00000046203) ENSSGRG00000046234 ENSSGRG00000046235 Golden-line barbel MODERN SPECIES 3037 mcm2 (ENSSGRG00000011177) #22 Common carp reference MODERN SPECIES 43 ENSCCRG00000055642 ENSCCRG00000069747 ENSCCRG00000055478 ENSCCRG00000038391 ENSCCRG00000075034 ENSCCRG00000080414 ENSCCRG00000071246 cers5 (ENSCCRG00000036296) ENSCCRG00000072000 ENSCCRG00000036305 ENSCCRG00000012643 ENSCCRG00000073556 ENSCCRG00000036806 dnase1l4.2 (ENSCCRG00000039317) tma7 (ENSCCRG00000077514) mcm2 (ENSCCRG00000054626) #22 ENSCCRG00000024338 #23 ENSCCRG00000071276 ENSCCRG00000021582 ENSCCRG00000057239 zgc:194627 (ENSCCRG00000049894) ENSCCRG00000043639 s1pr4 (ENSCCRG00000057515) ncln (ENSCCRG00000030135) ENSCCRG00000008459 tnfaip8l1 (ENSCCRG00000057448) mydgf (ENSCCRG00000031450) loxl5a (ENSCCRG00000032114) mibp (ENSCCRG00000032098) ENSCCRG00000032130 ENSCCRG00000032140 Goldfish DUPLICATION Goldfish MODERN SPECIES 3173 ENSCARG00000058474 ENSCARG00000058428 cers5 (ENSCARG00000058309) ENSCARG00000058298 ENSCARG00000058209 dnase1l4.2 (ENSCARG00000058184) dnase1l4.1 (ENSCARG00000058159) tma7 (ENSCARG00000058133) ccdc51 (ENSCARG00000058121) mcm2 (ENSCARG00000057932) #22 ENSCARG00000057908 zgc:171566 (ENSCARG00000057802) ENSCARG00000057796 ENSCARG00000055802 ENSCARG00000055795 ENSCARG00000055778 Goldfish MODERN SPECIES 1226 ENSCARG00000041819 ENSCARG00000041803 ENSCARG00000041791 ENSCARG00000041769 cers5 (ENSCARG00000041552) ENSCARG00000041526 ENSCARG00000041396 dnase1l4.2 (ENSCARG00000041304) dnase1l4.1 (ENSCARG00000041168) tma7 (ENSCARG00000041148) ccdc51 (ENSCARG00000041125) mcm2 (ENSCARG00000040158) #22 ENSCARG00000040096 zgc:171566 (ENSCARG00000039988) ENSCARG00000039973 ENSCARG00000039963 ENSCARG00000039942 ENSCARG00000039929 MYO9B (ENSCARG00000039757) s1pr4 (ENSCARG00000039705) ncln (ENSCARG00000039435) CERS1 (ENSCARG00000039420) Cyprininae ANCESTRAL SPECIES 551 ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.b.a.b.b.b.b.b.b.a.a.b.a.b.b.a.b.a.a.a.b ENSGT01030000234515.a.a.a.m.b ENSGT01090000260194.b ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.e ENSGT00940000163467.a.b.b.b.a.a.a.a ENSGT00940000163467.a.b.b.b.a.a.a.b ENSGT00950000182846.a.a.b.a.d.b ENSGT00950000182846.a.a.b.b.k.a ENSGT00940000168313 ENSGT00940000164287.b ENSGT00950000182846.a.a.b.b.l ENSGT00940000164287.a.a ENSGT01050000244824.F.h #22 ENSGT00730000111323.g.a #23 ENSGT00490000043388.b.a.q ENSGT01050000244806.b.a.b.c.a.a.b.b.b ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a.a ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.b Goldfish DUPLICATION Goldfish MODERN SPECIES 14 ENSCARG00000004284 ENSCARG00000004295 ENSCARG00000004314 ENSCARG00000004334 ENSCARG00000004346 ENSCARG00000004356 ENSCARG00000004366 cers5 (ENSCARG00000004396) ENSCARG00000004495 BCDIN3D (ENSCARG00000004498) ENSCARG00000004523 dnase1l4.2 (ENSCARG00000004552) dnase1l4.1 (ENSCARG00000004576) ENSCARG00000004602 ccdc51 (ENSCARG00000004608) mcm2 (ENSCARG00000004622) #22 ENSCARG00000004665 #23 zgc:171566 (ENSCARG00000004671) ENSCARG00000004686 ENSCARG00000004694 ENSCARG00000004698 zgc:194627 (ENSCARG00000004706) zgc:194627 (ENSCARG00000004714) zgc:194627 (ENSCARG00000004720) zgc:194627 (ENSCARG00000004732) MYO9B (ENSCARG00000004764) s1pr4 (ENSCARG00000004985) ncln (ENSCARG00000005010) CERS1 (ENSCARG00000005080) mydgf (ENSCARG00000005087) mibp (ENSCARG00000005096) Goldfish MODERN SPECIES 14 ENSCARG00000044806 ENSCARG00000044804 ENSCARG00000044792 ENSCARG00000044789 ENSCARG00000007653 cers5 (ENSCARG00000007046) ENSCARG00000006995 BCDIN3D (ENSCARG00000006991) ENSCARG00000006978 ENSCARG00000006975 ENSCARG00000006971 dnase1l4.2 (ENSCARG00000006947) dnase1l4.1 (ENSCARG00000006935) tma7 (ENSCARG00000006928) ccdc51 (ENSCARG00000006921) mcm2 (ENSCARG00000006800) #22 ENSCARG00000006757 #23 zgc:171566 (ENSCARG00000006739) ENSCARG00000006729 ENSCARG00000006717 ENSCARG00000006703 ENSCARG00000006695 ENSCARG00000006690 ENSCARG00000006681 rnasel4 (ENSCARG00000006665) rnasel4 (ENSCARG00000006658) ENSCARG00000006651 ENSCARG00000006615 ENSCARG00000006566 ENSCARG00000006539 ENSCARG00000006524 Cyprininae_a ANCESTRAL SPECIES 320 ENSGT01030000234515.a.a.a.n ENSGT01090000260194.b ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a.f ENSGT00940000161090.B.c.b.b.a.e ENSGT00940000163467.a.b.b.b.a.a.a.a ENSGT00940000163467.a.b.b.b.a.a.a.b ENSGT00950000182846.a.a.b.a.d.b ENSGT00950000182846.a.a.b.b.k.a ENSGT00950000182846.a.a.b.b.l ENSGT00940000164287.a.a ENSGT01050000244824.F.h #22 ENSGT00730000111323.g.a #23 ENSGT00730000111323.h #23 ENSGT00490000043388.b.a.q ENSGT01050000244806.b.a.b.c.a.a.b.b.b ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a.a ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.b ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.a ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.b.a.a ENSGT00990000209519.a.a ENSGT00940000156845.yc.b ENSGT01050000244887.B.d ENSGT00500000044945.a.b ENSGT01030000234515.b.p ENSGT00390000003488.a.b.a.i ENSGT00390000000777.c Common carp reference MODERN SPECIES 5 ENSCCRG00000033310 ENSCCRG00000066856 ENSCCRG00000044359 ENSCCRG00000054857 cers5 (ENSCCRG00000051105) ENSCCRG00000067065 ENSCCRG00000057310 ENSCCRG00000044740 ENSCCRG00000068149 ENSCCRG00000064108 dnase1l4.2 (ENSCCRG00000026300) dnase1l4.1 (ENSCCRG00000026272) ENSCCRG00000074839 dnase1l4.1 (ENSCCRG00000065204) ccdc51 (ENSCCRG00000066535) mcm2 (ENSCCRG00000026201) #22 ENSCCRG00000074609 #23 ENSCCRG00000075112 zgc:171566 (ENSCCRG00000024346) ENSCCRG00000026195 ENSCCRG00000065418 ENSCCRG00000024469 ENSCCRG00000069885 ENSCCRG00000054931 ENSCCRG00000081711 ENSCCRG00000064369 ENSCCRG00000058856 ENSCCRG00000073014 ENSCCRG00000072831 ENSCCRG00000059895 ENSCCRG00000047847 Golden-line barbel MODERN SPECIES 1067 cers5 (ENSSGRG00000017914) ENSSGRG00000017932 BCDIN3D (ENSSGRG00000017933) ENSSGRG00000017934 dnase1l4.2 (ENSSGRG00000017935) dnase1l4.1 (ENSSGRG00000017936) dnase1l4.1 (ENSSGRG00000017937) ENSSGRG00000017946 mcm2 (ENSSGRG00000017947) #22 ENSSGRG00000018005 #23 zgc:171566 (ENSSGRG00000018006) ENSSGRG00000018007 ENSSGRG00000018008 zgc:194627 (ENSSGRG00000018010) ENSSGRG00000018011 ENSSGRG00000018013 zgc:194627 (ENSSGRG00000018014) MYO9B (ENSSGRG00000018018) s1pr4 (ENSSGRG00000018462) ncln (ENSSGRG00000018474) CERS1 (ENSSGRG00000018979) ENSSGRG00000018981 tnfaip8l1 (ENSSGRG00000018982) mydgf (ENSSGRG00000018983) Zebrafish MODERN SPECIES 14 ENSDARG00000071662 ENSDARG00000093686 ENSDARG00000095295 ENSDARG00000071667 ENSDARG00000076358 ENSDARG00000077252 cers5 (ENSDARG00000002365) cox14 (ENSDARG00000092124) BCDIN3D (ENSDARG00000074111) ENSDARG00000043242 ENSDARG00000079328 dnase1l4.2 (ENSDARG00000011376) dnase1l4.1 (ENSDARG00000015123) tma7 (ENSDARG00000071670) ccdc51 (ENSDARG00000058828) mcm2 (ENSDARG00000102798) #22 GGH (ENSDARG00000105118) ENSDARG00000104592 ENSDARG00000094155 ENSDARG00000103696 ENSDARG00000098966 ENSDARG00000104399 zgc:194627 (ENSDARG00000102594) MYO9B (ENSDARG00000078313) s1pr4 (ENSDARG00000074851) ncln (ENSDARG00000058861) CERS1 (ENSDARG00000063412) tnfaip8l1 (ENSDARG00000086457) mydgf (ENSDARG00000071679) ENSDARG00000116752 loxl5a (ENSDARG00000071680) Clupeiformes ANCESTRAL SPECIES 345 ENSGT00950000182846.a.a.b.a.c ENSGT00940000168313 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000158890 ENSGT00940000163873.c.b ENSGT00940000163873.d ENSGT00440000038003 Denticle herring MODERN SPECIES 3 TMEM43 (ENSDCDG00000015112) ENSDCDG00000015086 cishb (ENSDCDG00000015078) twf2b (ENSDCDG00000014861) rpusd4 (ENSDCDG00000014842) qrich1 (ENSDCDG00000014837) ENSDCDG00000014834 NBL1 (ENSDCDG00000014833) ENSDCDG00000032924 ENSDCDG00000032747 celsr2 (ENSDCDG00000032620) dstyk (ENSDCDG00000031876) dnase1l4.2 (ENSDCDG00000031807) ENSDCDG00000031803 ccdc51 (ENSDCDG00000031801) mcm2 (ENSDCDG00000031792) #22 ENSDCDG00000031782 #23 zgc:171566 (ENSDCDG00000031775) LSM3 (ENSDCDG00000031769) slc6a6b (ENSDCDG00000031544) GRIP2 (ENSDCDG00000031515) sec13 (ENSDCDG00000031506) cand2 (ENSDCDG00000031447) rpl32 (ENSDCDG00000031439) ENSDCDG00000031437 ddo (ENSDCDG00000031436) ENSDCDG00000031426 ora4 (ENSDCDG00000031425) ENSDCDG00000031423 ssu72 (ENSDCDG00000031421) TMEM240 (ENSDCDG00000031419) Osteoglossiformes ANCESTRAL SPECIES 34 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a ENSGT01030000234528.B.b.a.a.a ENSGT00940000165535 ENSGT00940000168601 ENSGT00940000158414 ENSGT00940000156629 ENSGT00390000003114.e.a.b ENSGT01030000234515.a.a.a ENSGT01090000260194 ENSGT00940000153993.B ENSGT00940000161090.B.c.b.b.a ENSGT00390000003710 ENSGT00940000164287 ENSGT01050000244824.F #22 ENSGT00730000111323 #23 ENSGT00490000043388.b.a ENSGT00390000013951 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000155615.j ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000163873 ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000007160.a.a.r ENSGT00940000160561 P. kingsleyae MODERN SPECIES 51 ITGA7 (ENSPKIG00000001224) bloc1s1 (ENSPKIG00000024779) rdh5 (ENSPKIG00000024770) gls2b (ENSPKIG00000024748) cela1.3 (ENSPKIG00000024733) ENSPKIG00000024723 ENSPKIG00000024713 smarcd1 (ENSPKIG00000024684) gpd1b (ENSPKIG00000024669) COX14 (ENSPKIG00000024660) cers5 (ENSPKIG00000024634) BCDIN3D (ENSPKIG00000024617) ENSPKIG00000024610 TMA7B (ENSPKIG00000024601) ccdc51 (ENSPKIG00000024587) mcm2 (ENSPKIG00000024553) #22 Asian bonytongue MODERN SPECIES 14 ENSSFOG00015027355 ENSSFOG00015025491 ENSSFOG00015031401 ENSSFOG00015032804 ENSSFOG00015025933 ENSSFOG00015027284 ENSSFOG00015028401 ENSSFOG00015006648 smarcd1 (ENSSFOG00015006704) gpd1b (ENSSFOG00015006749) cers5 (ENSSFOG00015006797) ENSSFOG00015006854 BCDIN3D (ENSSFOG00015029496) ENSSFOG00015006878 ccdc51 (ENSSFOG00015006990) mcm2 (ENSSFOG00015007003) #22 ENSSFOG00015007051 #23 zgc:171566 (ENSSFOG00015007061) LSM3 (ENSSFOG00015007071) slc6a6b (ENSSFOG00015007103) GRIP2 (ENSSFOG00015007150) sec13 (ENSSFOG00015007199) cand2 (ENSSFOG00015007228) ENSSFOG00015026029 ssuh2rs1 (ENSSFOG00015007404) ssuh2.4 (ENSSFOG00015007409) ENSSFOG00015007426 ENSSFOG00015007443 DCAF1 (ENSSFOG00015007471) DOCK3 (ENSSFOG00015007666) manf (ENSSFOG00015024701) Spotted gar MODERN SPECIES 671 ENSLOCG00000013709 ENSLOCG00000013702 CPNE9 (ENSLOCG00000013677) MTMR14 (ENSLOCG00000013669) LHFPL4 (ENSLOCG00000013665) ENSLOCG00000013661 ENSLOCG00000013656 si:dkey-19e4.5 (ENSLOCG00000013652) SETD5 (ENSLOCG00000013641) ENSLOCG00000013623 zgc:171775 (ENSLOCG00000013616) dnase1l4.2 (ENSLOCG00000013612) ENSLOCG00000013606 tma7 (ENSLOCG00000013602) ccdc51 (ENSLOCG00000013595) mcm2 (ENSLOCG00000013582) #22 ENSLOCG00000013579 #23 ABTB1 (ENSLOCG00000013573) #24 zgc:171566 (ENSLOCG00000013564) LSM3 (ENSLOCG00000013560) slc6a6b (ENSLOCG00000013551) grip2a (ENSLOCG00000013537) sec13 (ENSLOCG00000013529) cand2 (ENSLOCG00000013520) rpl32 (ENSLOCG00000013512) ENSLOCG00000013502 ssuh2.4 (ENSLOCG00000013496) ENSLOCG00000013492 ENSLOCG00000013481 DCAF1 (ENSLOCG00000013471) DOCK3 (ENSLOCG00000013416) Elephant shark MODERN SPECIES 1500 ENSCMIG00000018825 ENSCMIG00000018827 ENSCMIG00000018829 ENSCMIG00000018830 ENSCMIG00000018831 ENSCMIG00000018832 ENSCMIG00000018834 ENSCMIG00000018837 ENSCMIG00000018838 ENSCMIG00000018839 ENSCMIG00000018840 COPG1 (ENSCMIG00000018845) #36 hmces (ENSCMIG00000018866) #35 PLXNA1 (ENSCMIG00000018959) #20 tpra1 (ENSCMIG00000019216) #21 mcm2 (ENSCMIG00000019230) #22 ENSCMIG00000019235 #23 ABTB1 (ENSCMIG00000019237) #24 mgll (ENSCMIG00000019241) #25 kbtbd12 (ENSCMIG00000019242) #26 sec61a1 (ENSCMIG00000019258) #27 ruvbl1 (ENSCMIG00000019320) #28 eefsec (ENSCMIG00000019328) #29 ENSCMIG00000019331 #31 rpn1 (ENSCMIG00000019336) #32 HCFC1 (ENSCMIG00000019363) rab7a (ENSCMIG00000019410) #33 h1-10 (ENSCMIG00000019429) #34 ENSCMIG00000019431 txnrd3 (ENSCMIG00000019447) #18 CHST13 (ENSCMIG00000019479) Cyclostomata ANCESTRAL SPECIES ENSGT01050000244824.F #22 Lamprey MODERN SPECIES 5682 mcm2 (ENSPMAG00000004823) #22 Hagfish MODERN SPECIES 59 ENSEBUG00000009186 setd3 (ENSEBUG00000006193) ENSEBUG00000007548 ENSEBUG00000003845 ENSEBUG00000003292 ENSEBUG00000014175 ENSEBUG00000003665 ENSEBUG00000011548 LDLRAD2 (ENSEBUG00000013324) ENSEBUG00000003860 ENSEBUG00000017064 farsb (ENSEBUG00000006846) M6PR (ENSEBUG00000012165) wdr45 (ENSEBUG00000012687) rab7a (ENSEBUG00000003339) #33 mcm2 (ENSEBUG00000017080) #22 CHST13 (ENSEBUG00000007715) Ciona ANCESTRAL SPECIES ENSGT01050000244824.F #22 Ciona intestinalis DUPLICATION Ciona intestinalis MODERN SPECIES 10 ENSCING00000020976 ENSCING00000002530 ENSCING00000010128 ENSCING00000002532 ENSCING00000002527 ENSCING00000015157 ENSCING00000015155 ENSCING00000002525 ENSCING00000022787 ENSCING00000017598 ENSCING00000004589 ftzf (ENSCING00000004593) ENSCING00000022567 ENSCING00000014991 ENSCING00000021669 ENSCING00000014926 #22 ENSCING00000010070 ENSCING00000007851 ENSCING00000007852 ENSCING00000004625 ENSCING00000014944 ENSCING00000004616 ENSCING00000004597 ENSCING00000014981 ENSCING00000020564 ENSCING00000014986 ENSCING00000019706 ENSCING00000014988 ENSCING00000022352 ENSCING00000007846 #22 ENSCING00000018520 Ciona intestinalis MODERN SPECIES 10 ENSCING00000021669 ENSCING00000014926 #22 ENSCING00000010070 ENSCING00000007851 ENSCING00000007852 ENSCING00000004625 ENSCING00000014944 ENSCING00000004616 ENSCING00000004597 ENSCING00000014981 ENSCING00000020564 ENSCING00000014986 ENSCING00000019706 ENSCING00000014988 ENSCING00000022352 ENSCING00000007846 #22 ENSCING00000018520 ENSCING00000014921 ENSCING00000014874 ENSCING00000010068 ENSCING00000021904 ENSCING00000020623 ENSCING00000022107 ENSCING00000014875 ENSCING00000014876 ENSCING00000024829 ENSCING00000025059 ENSCING00000007823 ENSCING00000020970 ENSCING00000014877 ENSCING00000010069 Ciona savignyi MODERN SPECIES 307 ENSCSAVG00000006476 ENSCSAVG00000006473 ENSCSAVG00000006470 ENSCSAVG00000006465 ENSCSAVG00000006464 ENSCSAVG00000006463 ENSCSAVG00000006460 ENSCSAVG00000006359 ENSCSAVG00000006356 ENSCSAVG00000006212 ENSCSAVG00000006208 ENSCSAVG00000006187 ENSCSAVG00000006156 ENSCSAVG00000006045 ENSCSAVG00000006033 ENSCSAVG00000005742 #22 ENSCSAVG00000005724 ENSCSAVG00000005721 ENSCSAVG00000005718 ENSCSAVG00000005716 ENSCSAVG00000005201 ENSCSAVG00000005170 ENSCSAVG00000005167 ENSCSAVG00000005165 ENSCSAVG00000005088 ENSCSAVG00000004757 ENSCSAVG00000004754 ENSCSAVG00000004670 ENSCSAVG00000004668 ENSCSAVG00000004666 ENSCSAVG00000004659 Ecdysozoa ANCESTRAL SPECIES ENSGT01050000244824.F #22 Fruitfly MODERN SPECIES 19 CG7878 (FBgn0037549) CG9667 (FBgn0037550) Arl8 (FBgn0037551) grn (FBgn0001138) CheA84a (FBgn0261290) CG7800 (FBgn0037552) CG18249 (FBgn0037553) PolI (FBgn0037554) Ada2b (FBgn0037555) CG9636 (FBgn0037556) CG33722 (FBgn0064126) CG18749 (FBgn0042182) CG15864 (FBgn0040528) mtg (FBgn0260386) RPA1 (FBgn0010173) Mcm2 (FBgn0014861) #22 CG9630 (FBgn0037561) ato (FBgn0010433) Nazo (FBgn0037562) CG11672 (FBgn0037563) CG31464 (FBgn0051464) CG31463 (FBgn0051463) CG9626 (FBgn0037565) mRpL1 (FBgn0037566) nac (FBgn0265351) Sgt1 (FBgn0265101) tex (FBgn0037569) CG11693 (FBgn0037570) CG11694 (FBgn0037571) CG11698 (FBgn0037572) CG7483 (FBgn0037573) Caenorhabditis elegans MODERN SPECIES 1 set-24 (WBGene00012845) Y43F11A.1 (WBGene00012841) Y17G7B.18 (WBGene00012469) Y17G7B.17 (WBGene00012468) cnt-1 (WBGene00000565) Y17G7B.22 (WBGene00012473) arrd-8 (WBGene00012467) arrd-7 (WBGene00012464) nadk-2 (WBGene00012463) ippk-1 (WBGene00012466) tpi-1 (WBGene00006601) cyn-16 (WBGene00000892) Y17G7B.8 (WBGene00012462) Y17G7B.12 (WBGene00012465) glb-29 (WBGene00012461) mcm-2 (WBGene00003154) #22 Y17G7B.23 (WBGene00044030) dhps-1 (WBGene00012460) Y17G7B.3 (WBGene00012459) ash-2 (WBGene00012458) Y17G7B.20 (WBGene00012471) Y17G7B.21 (WBGene00012472) acbp-6 (WBGene00012457) mex-1 (WBGene00003228) W03C9.5 (WBGene00012221) rab-7 (WBGene00004271) W03C9.2 (WBGene00012220) W03C9.1 (WBGene00012219) W03C9.6 (WBGene00012222) W03C9.8 (WBGene00012223) lin-29 (WBGene00003015) Yeast MODERN SPECIES 1 YBL008W-A ALK2 (YBL009W) YBL010C SCT1 (YBL011W) YBL012C FMT1 (YBL013W) RRN6 (YBL014C) ACH1 (YBL015W) FUS3 (YBL016W) PEP1 (YBL017C) POP8 (YBL018C) APN2 (YBL019W) RFT1 (YBL020W) HAP3 (YBL021C) PIM1 (YBL022C) MCM2 (YBL023C) #22 NCL1 (YBL024W) RRN10 (YBL025W) LSM2 (YBL026W) RPL19B (YBL027W) YBL028C YBL029W YBL029C-A PET9 (YBL030C) SHE1 (YBL031W) HEK2 (YBL032W) RIB1 (YBL033C) STU1 (YBL034C) POL12 (YBL035C) YBL036C APL3 (YBL037W) Fungi/Metazoa group ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Yeast MODERN SPECIES 12 VPS63 (YLR261C) YPT6 (YLR262C) TMA7 (YLR262C-A) RED1 (YLR263W) RPS28B (YLR264W) YLR264C-A NEJ1 (YLR265C) PDR8 (YLR266C) BOP2 (YLR267W) SEC22 (YLR268W) YLR269C DCS1 (YLR270W) CMG1 (YLR271W) YCS4 (YLR272C) PIG1 (YLR273C) MCM5 (YLR274W) ##22 SMD2 (YLR275W) DBP9 (YLR276C) YSH1 (YLR277C) YLR278C YLR279W YLR280C YLR281C YLR282C YLR283W ECI1 (YLR284C) NNT1 (YLR285W) YLR285C-A CTS1 (YLR286C) YLR286W-A YLR287C Bilateria ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Chordata ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Ciona ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Ciona intestinalis MODERN SPECIES 12 ENSCING00000024813 ENSCING00000021725 ENSCING00000003415 ENSCING00000021519 ENSCING00000022424 ENSCING00000019293 ENSCING00000013262 ENSCING00000013263 ENSCING00000003389 ENSCING00000003388 ENSCING00000003383 ENSCING00000018559 ENSCING00000013253 ENSCING00000003378 ENSCING00000013254 ENSCING00000003363 ##22 ENSCING00000018574 ENSCING00000019375 ENSCING00000020741 ENSCING00000013257 ENSCING00000013258 ENSCING00000022557 ENSCING00000003356 ENSCING00000010133 ENSCING00000003331 ENSCING00000019359 ENSCING00000020612 ENSCING00000013259 ENSCING00000003328 zf(matrin)-2 (ENSCING00000003319) ENSCING00000013260 Vertebrata ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Cyclostomata ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Lamprey MODERN SPECIES 85 ENSPMAG00000002121 mcm5 (ENSPMAG00000002132) ##22 ENSPMAG00000002158 sars2 (ENSPMAG00000002160) ENSPMAG00000002200 ENSPMAG00000002228 ENSPMAG00000002243 ENSPMAG00000009988 ENSPMAG00000002247 crnkl1 (ENSPMAG00000002250) flrt3 (ENSPMAG00000002268) ENSPMAG00000002270 ENSPMAG00000002271 Hagfish MODERN SPECIES 621 ENSEBUG00000001973 ENSEBUG00000013757 ENSEBUG00000001930 ENSEBUG00000000568 mcm5 (ENSEBUG00000004429) ##22 ENSEBUG00000004421 ENSEBUG00000008106 ENSEBUG00000016964 ENSEBUG00000015068 ENSEBUG00000001369 ENSEBUG00000007002 ENSEBUG00000010527 PHYHD1 (ENSEBUG00000009279) atf3 (ENSEBUG00000006239) atg101 (ENSEBUG00000010175) yipf6 (ENSEBUG00000010814) ENSEBUG00000003026 abce1 (ENSEBUG00000017019) ENSEBUG00000009270 ENSEBUG00000001628 Gnathostomata ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Elephant shark MODERN SPECIES 3297 MCM5 (ENSCMIG00000005687) ##22 Euteleostomi ANCESTRAL SPECIES 445 ENSGT00390000000159 ENSGT00940000155858 ENSGT00950000183099 ENSGT00550000075117 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000017673.b ENSGT01050000244824.G ##22 Sarcopterygii ANCESTRAL SPECIES 328 ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 ENSGT00940000160320 ENSGT00940000157534 ENSGT00950000183099 ENSGT00550000075117 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000017673.b ENSGT01050000244824.G ##22 Coelacanth MODERN SPECIES 1628 ENSLACG00000000374 ENSLACG00000002044 FOXRED2 (ENSLACG00000003725) HMOX1 (ENSLACG00000004513) MCM5 (ENSLACG00000005384) ##22 GRIN2B (ENSLACG00000008175) Tetrapoda ANCESTRAL SPECIES 153 ENSGT00390000016992 ENSGT00940000155964 ENSGT00530000063707.a ENSGT00530000063509.A ENSGT00940000155955.C ENSGT00390000000159 ENSGT00940000155858 ENSGT00390000012258 ENSGT00940000157534 ENSGT00950000183099 ENSGT00550000075117 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000017673.b ENSGT01050000244824.G ##22 Anura DUPLICATION Anura ANCESTRAL SPECIES ENSGT01050000244824.G.a ##22 Leishan spiny toad MODERN SPECIES SETBP1 (ENSLLEG00000000867) ENSLLEG00000000828 ENSLLEG00000000804 EPG5 (ENSLLEG00000000678) ENSLLEG00000000648 PSTPIP2 (ENSLLEG00000000590) ENSLLEG00000000566 ENSLLEG00000000550 ENSLLEG00000000531 ENSLLEG00000000516 ENSLLEG00000000505 MYO5B (ENSLLEG00000000110) ENSLLEG00000000021 ACAA2 (ENSLLEG00000000011) LIPG (ENSLLEG00000004433) ENSLLEG00000004416 ##22 ENSLLEG00000004390 C18orf32 (ENSLLEG00000004379) ENSLLEG00000004377 ENSLLEG00000004373 ENSLLEG00000004369 DYM (ENSLLEG00000004334) ENSLLEG00000004313 ENSLLEG00000004310 ENSLLEG00000004306 ENSLLEG00000004298 CTIF (ENSLLEG00000004281) ZBTB7C (ENSLLEG00000004273) SMAD2 (ENSLLEG00000004265) SKOR2 (ENSLLEG00000004251) IER3IP1 (ENSLLEG00000004247) Anura ANCESTRAL SPECIES 20 ENSGT00940000162720.a.b.a ENSGT00940000167062 ENSGT00530000063960.j ENSGT00390000018482 ENSGT00530000063960.i ENSGT00390000018868.A ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000157534 ENSGT00950000183099 ENSGT00550000075117 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000017673.b ENSGT01050000244824.G.b ##22 ENSGT00390000018898 ENSGT00390000017489 ENSGT00940000158004 ENSGT00420000030724 ENSGT00390000017504 Leishan spiny toad MODERN SPECIES 11 TOM1 (ENSLLEG00000025691) ENSLLEG00000025951 ENSLLEG00000025974 ENSLLEG00000025998 ENSLLEG00000026013 ENSLLEG00000026029 ENSLLEG00000026053 TEF (ENSLLEG00000026085) ZC3H7B (ENSLLEG00000026170) ENSLLEG00000026348 ENSLLEG00000026366 ENSLLEG00000026384 ENSLLEG00000026415 HMOX1 (ENSLLEG00000026434) ENSLLEG00000026472 MCM5 (ENSLLEG00000026499) ##22 NDUFA6 (ENSLLEG00000026689) FOXRED2 (ENSLLEG00000026723) TXN2 (ENSLLEG00000026772) MYH9 (ENSLLEG00000026836) ENSLLEG00000027168 ENSLLEG00000027181 SLC25A38 (ENSLLEG00000027198) ENSLLEG00000027229 ENSLLEG00000027277 RBFOX2 (ENSLLEG00000027568) FMC1 (ENSLLEG00000016147) LUC7L2 (ENSLLEG00000016217) ENSLLEG00000016996 ENSLLEG00000017181 RRP7A (ENSLLEG00000017434) Frog MODERN SPECIES 4 rrp7a (ENSXETG00000013414) serhl2 (ENSXETG00000013413) poldip3 (ENSXETG00000013412) ENSXETG00000044948 luc7l2 (ENSXETG00000000229) fmc1 (ENSXETG00000032301) rbfox2 (ENSXETG00000000231) rpsa (ENSXETG00000027344) ENSXETG00000042131 slc25a38 (ENSXETG00000000232) myh9 (ENSXETG00000000233) txn2 (ENSXETG00000035461) foxred2 (ENSXETG00000000247) rab11fip4l (ENSXETG00000030042) hmox1 (ENSXETG00000000251) mcm5 (ENSXETG00000000253) ##22 ndufa6 (ENSXETG00000000256) smdt1 (ENSXETG00000027338) pheta2 (ENSXETG00000000260) septin3 (ENSXETG00000049180) ENSXETG00000036884 cenpm (ENSXETG00000027331) ENSXETG00000032012 mrtfa (ENSXETG00000022963) st13 (ENSXETG00000022971) fhit (ENSXETG00000022969) xpnpep3 (ENSXETG00000022973) ep300 (ENSXETG00000022974) rbx1 (ENSXETG00000035313) ENSXETG00000042501 l3mbtl2 (ENSXETG00000022981) Amniota ANCESTRAL SPECIES 5 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Sauria ANCESTRAL SPECIES 4 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Archosauria ANCESTRAL SPECIES 4 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Aves ANCESTRAL SPECIES 1 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Neognathae ANCESTRAL SPECIES 3 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Galloanserae ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963.q ENSGT00510000048963.r ENSGT00390000013198 Anatidae ANCESTRAL SPECIES 8 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963.q ENSGT00510000048963.r ENSGT00390000013198 Pink-footed goose MODERN SPECIES 58 PWP1 (ENSABRG00000004331) PRDM4 (ENSABRG00000004303) ASCL4 (ENSABRG00000004292) RTCB (ENSABRG00000004282) BPIFC (ENSABRG00000004274) FBXO7 (ENSABRG00000004259) ENSABRG00000004253 TIMP3 (ENSABRG00000004248) SYN3 (ENSABRG00000003725) LARGE1 (ENSABRG00000003625) ISX (ENSABRG00000003574) HMGXB4 (ENSABRG00000003392) TOM1 (ENSABRG00000003370) HMOX1 (ENSABRG00000003342) ENSABRG00000003332 MCM5 (ENSABRG00000003324) ##22 RASD2 (ENSABRG00000003319) MB (ENSABRG00000003313) ENSABRG00000003307 RBFOX2 (ENSABRG00000003221) MYH9 (ENSABRG00000003176) TXN2 (ENSABRG00000003112) FOXRED2 (ENSABRG00000003092) EIF3D (ENSABRG00000003077) CACNG2 (ENSABRG00000003067) IFT27 (ENSABRG00000003003) PVALB (ENSABRG00000002994) NCF4 (ENSABRG00000002959) ENSABRG00000002944 ENSABRG00000002930 TEX33 (ENSABRG00000002924) Duck MODERN SPECIES CRY1 (ENSAPLG00000008378) ABTB3 (ENSAPLG00000009119) PWP1 (ENSAPLG00000009587) PRDM4 (ENSAPLG00000009846) ASCL4 (ENSAPLG00000010091) RTCB (ENSAPLG00000008226) BPIFC (ENSAPLG00000010092) FBXO7 (ENSAPLG00000010521) TIMP3 (ENSAPLG00000023484) SYN3 (ENSAPLG00000010781) LARGE1 (ENSAPLG00000008894) ISX (ENSAPLG00000008806) HMGXB4 (ENSAPLG00000008799) TOM1 (ENSAPLG00000008336) HMOX1 (ENSAPLG00000008265) MCM5 (ENSAPLG00000007931) ##22 RASD2 (ENSAPLG00000007921) MB (ENSAPLG00000007648) ENSAPLG00000016734 RBFOX2 (ENSAPLG00000007609) MYH9 (ENSAPLG00000007279) CACNG2 (ENSAPLG00000002618) IFT27 (ENSAPLG00000002421) PVALB (ENSAPLG00000002414) ENSAPLG00000022348 ENSAPLG00000002077 ENSAPLG00000030389 TST (ENSAPLG00000001728) MPST (ENSAPLG00000001637) KCTD17 (ENSAPLG00000030290) TMPRSS6 (ENSAPLG00000000590) Phasianidae ANCESTRAL SPECIES ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963.q ENSGT00390000013198 ENSGT00510000046773.a.b Phasianidae_b ANCESTRAL SPECIES ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963.q ENSGT00390000013198 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Chicken MODERN SPECIES PWP1 (ENSGALG00010015613) PRDM4 (ENSGALG00010015583) ASCL4 (ENSGALG00010015553) RTCB (ENSGALG00010015544) BPIFCB (ENSGALG00010015515) ENSGALG00010015496 FBXO7 (ENSGALG00010015478) TIMP3 (ENSGALG00010015407) SYN3 (ENSGALG00010015391) ENSGALG00010015339 LARGE1 (ENSGALG00010015327) ISX (ENSGALG00010015257) HMGXB4 (ENSGALG00010015203) TOM1 (ENSGALG00010015191) HMOX1 (ENSGALG00010015155) MCM5 (ENSGALG00010015126) ##22 RASD2 (ENSGALG00010015117) MB (ENSGALG00010015107) RBFOX2 (ENSGALG00010015095) MYH9 (ENSGALG00010015031) TXN2 (ENSGALG00010014945) FOXRED2 (ENSGALG00010014936) EIF3D (ENSGALG00010014917) CACNG2 (ENSGALG00010014910) IFT27 (ENSGALG00010014906) PVALB (ENSGALG00010014889) NCF4 (ENSGALG00010014840) ENSGALG00010015957 ENSGALG00010014829 ENSGALG00010014818 TST (ENSGALG00010014816) Turkey MODERN SPECIES ENSMGAG00000018499 ENSMGAG00000019772 ENSMGAG00000012955 ENSMGAG00000012967 ENSMGAG00000012968 ENSMGAG00000012974 TDG (ENSMGAG00000012985) ENSMGAG00000013000 ENSMGAG00000012998 ISX (ENSMGAG00000012765) ENSMGAG00000022479 ENSMGAG00000018861 HMGXB4 (ENSMGAG00000012757) TOM1 (ENSMGAG00000012748) HMOX1 (ENSMGAG00000012739) MCM5 (ENSMGAG00000012730) ##22 RASD2 (ENSMGAG00000018231) RBFOX2 (ENSMGAG00000012726) MYH9 (ENSMGAG00000012678) TXN2 (ENSMGAG00000012649) FOXRED2 (ENSMGAG00000012652) EIF3D (ENSMGAG00000012653) CACNG2 (ENSMGAG00000012659) IFT27 (ENSMGAG00000012665) PVALB (ENSMGAG00000019354) NCF4 (ENSMGAG00000012609) ENSMGAG00000022951 TEX33 (ENSMGAG00000012620) TST (ENSMGAG00000012622) KCTD17 (ENSMGAG00000012625) TMPRSS6 (ENSMGAG00000012637) Japanese quail MODERN SPECIES CRY1 (ENSCJPG00005018276) ABTB3 (ENSCJPG00005018274) PWP1 (ENSCJPG00005018198) PRDM4 (ENSCJPG00005018196) ASCL4 (ENSCJPG00005018194) RTCB (ENSCJPG00005018192) BPIFC (ENSCJPG00005018190) FBXO7 (ENSCJPG00005018189) TIMP3 (ENSCJPG00005018188) SYN3 (ENSCJPG00005018187) LARGE1 (ENSCJPG00005018186) ISX (ENSCJPG00005018181) HMGXB4 (ENSCJPG00005018179) TOM1 (ENSCJPG00005018178) HMOX1 (ENSCJPG00005018177) MCM5 (ENSCJPG00005018176) ##22 RASD2 (ENSCJPG00005018174) MB (ENSCJPG00005018172) ENSCJPG00005018171 RBFOX2 (ENSCJPG00005018004) MYH9 (ENSCJPG00005013687) TXN2 (ENSCJPG00005013680) FOXRED2 (ENSCJPG00005013675) EIF3D (ENSCJPG00005013669) CACNG2 (ENSCJPG00005013668) IFT27 (ENSCJPG00005013667) PVALB (ENSCJPG00005013666) NCF4 (ENSCJPG00005013663) ENSCJPG00005013662 TST (ENSCJPG00005013660) MPST (ENSCJPG00005013659) Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Neognathae_c ANCESTRAL SPECIES ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Golden eagle MODERN SPECIES 8 CRY1 (ENSACCG00020007130) ABTB3 (ENSACCG00020006998) PWP1 (ENSACCG00020006833) PRDM4 (ENSACCG00020006770) ASCL4 (ENSACCG00020006751) RTCB (ENSACCG00020006741) BPIFC (ENSACCG00020006720) FBXO7 (ENSACCG00020006706) TIMP3 (ENSACCG00020006697) SYN3 (ENSACCG00020006681) LARGE1 (ENSACCG00020006660) ENSACCG00020006637 HMGXB4 (ENSACCG00020006629) TOM1 (ENSACCG00020006595) HMOX1 (ENSACCG00020006576) MCM5 (ENSACCG00020006548) ##22 RASD2 (ENSACCG00020006526) MB (ENSACCG00020006517) RBFOX2 (ENSACCG00020006449) MYH9 (ENSACCG00020006381) TXN2 (ENSACCG00020006363) FOXRED2 (ENSACCG00020006354) EIF3D (ENSACCG00020006328) CACNG2 (ENSACCG00020006309) IFT27 (ENSACCG00020006298) PVALB (ENSACCG00020006289) NCF4 (ENSACCG00020006277) CSF2RB (ENSACCG00020006258) TEX33 (ENSACCG00020006248) TST (ENSACCG00020006237) MPST (ENSACCG00020006229) Kakapo MODERN SPECIES 20 CRY1 (ENSSHBG00005001648) ABTB3 (ENSSHBG00005001765) PWP1 (ENSSHBG00005001839) PRDM4 (ENSSHBG00005001862) ASCL4 (ENSSHBG00005001890) RTCB (ENSSHBG00005001907) LARGE1 (ENSSHBG00005001933) SYN3 (ENSSHBG00005001973) TIMP3 (ENSSHBG00005002003) ENSSHBG00005002017 FBXO7 (ENSSHBG00005002035) NPFFR2 (ENSSHBG00005002069) HMGXB4 (ENSSHBG00005002083) TOM1 (ENSSHBG00005002109) HMOX1 (ENSSHBG00005002149) MCM5 (ENSSHBG00005002173) ##22 RASD2 (ENSSHBG00005002211) MB (ENSSHBG00005002224) RBFOX2 (ENSSHBG00005002254) ENSSHBG00005002319 ENSSHBG00005002365 TXN2 (ENSSHBG00005002382) FOXRED2 (ENSSHBG00005002399) EIF3D (ENSSHBG00005002420) CACNG2 (ENSSHBG00005002445) IFT27 (ENSSHBG00005002454) PVALB (ENSSHBG00005002468) NCF4 (ENSSHBG00005002486) ENSSHBG00005002507 TEX33 (ENSSHBG00005002522) TST (ENSSHBG00005002538) Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Great tit MODERN SPECIES 10 ENSPMJG00000008405 ENSPMJG00000008403 PRDM4 (ENSPMJG00000008399) ASCL4 (ENSPMJG00000008398) RTCB (ENSPMJG00000008395) BPIFC (ENSPMJG00000008393) FBXO7 (ENSPMJG00000008333) TIMP3 (ENSPMJG00000008331) SYN3 (ENSPMJG00000008326) LARGE1 (ENSPMJG00000008279) ISX (ENSPMJG00000008246) ENSPMJG00000008168 HMGXB4 (ENSPMJG00000008166) TOM1 (ENSPMJG00000008159) HMOX1 (ENSPMJG00000008156) MCM5 (ENSPMJG00000008153) ##22 RASD2 (ENSPMJG00000008150) MB (ENSPMJG00000008148) ENSPMJG00000008146 RBFOX2 (ENSPMJG00000008133) MYH9 (ENSPMJG00000008073) TXN2 (ENSPMJG00000008072) FOXRED2 (ENSPMJG00000008071) EIF3D (ENSPMJG00000008069) CACNG2 (ENSPMJG00000008067) IFT27 (ENSPMJG00000008020) PVALB (ENSPMJG00000008011) NCF4 (ENSPMJG00000008005) CSF2RB (ENSPMJG00000008004) TST (ENSPMJG00000008001) MPST (ENSPMJG00000007999) Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415.i ENSGT00940000159601 ENSGT00940000155415.j ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881.b ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT00390000006670 ENSGT00940000155415.i ENSGT00940000159601 ENSGT00940000155415.j ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881.b ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT00390000006670 ENSGT00940000155415.i ENSGT00940000159601 ENSGT00940000155415.j ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881.b ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00960000189355 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Zebra finch MODERN SPECIES 11 ABTB3 (ENSTGUG00000010981) PWP1 (ENSTGUG00000010969) PRDM4 (ENSTGUG00000010962) ASCL4 (ENSTGUG00000019350) RTCB (ENSTGUG00000010947) ENSTGUG00000010918 FBXO7 (ENSTGUG00000010909) TIMP3 (ENSTGUG00000026320) SYN3 (ENSTGUG00000028010) LARGE1 (ENSTGUG00000010873) ISX (ENSTGUG00000010871) ENSTGUG00000010863 HMGXB4 (ENSTGUG00000028862) TOM1 (ENSTGUG00000010846) HMOX1 (ENSTGUG00000010842) MCM5 (ENSTGUG00000010831) ##22 RASD2 (ENSTGUG00000010826) MB (ENSTGUG00000010818) ENSTGUG00000025527 RBFOX2 (ENSTGUG00000025671) MYH9 (ENSTGUG00000010746) TXN2 (ENSTGUG00000010739) FOXRED2 (ENSTGUG00000010730) EIF3D (ENSTGUG00000010728) CACNG2 (ENSTGUG00000010725) IFT27 (ENSTGUG00000021039) PVALB (ENSTGUG00000010713) NCF4 (ENSTGUG00000010694) CSF2RB (ENSTGUG00000010656) TST (ENSTGUG00000028873) KCTD17 (ENSTGUG00000010672) Common canary MODERN SPECIES 6 CRY1 (ENSSCAG00000003375) ABTB3 (ENSSCAG00000003527) PWP1 (ENSSCAG00000003873) PRDM4 (ENSSCAG00000003888) RTCB (ENSSCAG00000003897) FBXO7 (ENSSCAG00000003913) ENSSCAG00000003928 TIMP3 (ENSSCAG00000003936) ENSSCAG00000003941 LARGE1 (ENSSCAG00000003947) ENSSCAG00000003961 ENSSCAG00000003966 HMGXB4 (ENSSCAG00000003974) TOM1 (ENSSCAG00000003990) HMOX1 (ENSSCAG00000004008) MCM5 (ENSSCAG00000004011) ##22 RASD2 (ENSSCAG00000004019) MB (ENSSCAG00000004023) ENSSCAG00000004029 RBFOX2 (ENSSCAG00000004039) MYH9 (ENSSCAG00000004074) TXN2 (ENSSCAG00000004083) FOXRED2 (ENSSCAG00000004085) EIF3D (ENSSCAG00000004088) CACNG2 (ENSSCAG00000004102) IFT27 (ENSSCAG00000004116) PVALB (ENSSCAG00000004123) NCF4 (ENSSCAG00000004128) CSF2RB (ENSSCAG00000004134) TST (ENSSCAG00000004149) MPST (ENSSCAG00000004151) Medium ground finch MODERN SPECIES 37 MTERF2 (ENSGFOG00000008170) CRY1 (ENSGFOG00000008174) ABTB3 (ENSGFOG00000008228) PWP1 (ENSGFOG00000008313) PRDM4 (ENSGFOG00000008320) ASCL4 (ENSGFOG00000008341) RTCB (ENSGFOG00000008348) FBXO7 (ENSGFOG00000008396) SYN3 (ENSGFOG00000008404) TIMP3 (ENSGFOG00000008415) LARGE1 (ENSGFOG00000008423) ENSGFOG00000008429 HMGXB4 (ENSGFOG00000008435) TOM1 (ENSGFOG00000008440) HMOX1 (ENSGFOG00000008447) MCM5 (ENSGFOG00000008457) ##22 RASD2 (ENSGFOG00000008464) MB (ENSGFOG00000008467) ENSGFOG00000008485 RBFOX2 (ENSGFOG00000008497) MYH9 (ENSGFOG00000008535) TXN2 (ENSGFOG00000008560) FOXRED2 (ENSGFOG00000008567) EIF3D (ENSGFOG00000008591) CACNG2 (ENSGFOG00000008601) IFT27 (ENSGFOG00000008605) PVALB (ENSGFOG00000008613) NCF4 (ENSGFOG00000008617) ENSGFOG00000008635 TST (ENSGFOG00000008803) MPST (ENSGFOG00000008814) Flycatcher MODERN SPECIES 10 PRDM4 (ENSFALG00000013342) ASCL4 (ENSFALG00000013339) RTCB (ENSFALG00000013334) BPIFC (ENSFALG00000013313) FBXO7 (ENSFALG00000026531) TIMP3 (ENSFALG00000028031) ENSFALG00000026948 SYN3 (ENSFALG00000013273) LARGE1 (ENSFALG00000013252) ISX (ENSFALG00000013243) ENSFALG00000023952 ENSFALG00000028926 HMGXB4 (ENSFALG00000026744) TOM1 (ENSFALG00000013218) HMOX1 (ENSFALG00000013195) MCM5 (ENSFALG00000013153) ##22 RASD2 (ENSFALG00000028819) MB (ENSFALG00000013121) RBFOX2 (ENSFALG00000013111) MYH9 (ENSFALG00000013048) TXN2 (ENSFALG00000023136) FOXRED2 (ENSFALG00000013016) EIF3D (ENSFALG00000013012) CACNG2 (ENSFALG00000013007) IFT27 (ENSFALG00000028015) PVALB (ENSFALG00000023210) NCF4 (ENSFALG00000012982) CSF2RB (ENSFALG00000012962) TST (ENSFALG00000012956) MPST (ENSFALG00000012951) KCTD17 (ENSFALG00000012941) African ostrich MODERN SPECIES 945 ABTB3 (ENSSCUG00000016992) PWP1 (ENSSCUG00000016991) PRDM4 (ENSSCUG00000016989) ASCL4 (ENSSCUG00000016988) RTCB (ENSSCUG00000016980) ENSSCUG00000016975 ENSSCUG00000016973 FBXO7 (ENSSCUG00000016972) TIMP3 (ENSSCUG00000016971) SYN3 (ENSSCUG00000016968) LARGE1 (ENSSCUG00000016962) ENSSCUG00000016958 HMGXB4 (ENSSCUG00000016956) TOM1 (ENSSCUG00000016953) HMOX1 (ENSSCUG00000016949) MCM5 (ENSSCUG00000016946) ##22 RASD2 (ENSSCUG00000016942) MB (ENSSCUG00000016940) ENSSCUG00000016939 RBFOX2 (ENSSCUG00000016933) MYH9 (ENSSCUG00000016880) TXN2 (ENSSCUG00000016830) FOXRED2 (ENSSCUG00000016829) EIF3D (ENSSCUG00000016824) CACNG2 (ENSSCUG00000016818) IFT27 (ENSSCUG00000016816) PVALB (ENSSCUG00000016814) NCF4 (ENSSCUG00000016808) ENSSCUG00000016800 TEX33 (ENSSCUG00000016795) TST (ENSSCUG00000016791) Australian saltwater crocodile MODERN SPECIES 49 PWP1 (ENSCPRG00005018573) PRDM4 (ENSCPRG00005018580) ASCL4 (ENSCPRG00005018582) RTCB (ENSCPRG00005018583) ENSCPRG00005018586 ENSCPRG00005018588 FBXO7 (ENSCPRG00005018590) SYN3 (ENSCPRG00005018596) TIMP3 (ENSCPRG00005018605) ENSCPRG00005018608 LARGE1 (ENSCPRG00005018610) ENSCPRG00005018618 HMGXB4 (ENSCPRG00005018629) TOM1 (ENSCPRG00005018632) HMOX1 (ENSCPRG00005018634) MCM5 (ENSCPRG00005018636) ##22 RASD2 (ENSCPRG00005018638) MB (ENSCPRG00005018639) ENSCPRG00005018641 RBFOX2 (ENSCPRG00005018646) MYH9 (ENSCPRG00005018786) TXN2 (ENSCPRG00005018929) FOXRED2 (ENSCPRG00005018930) EIF3D (ENSCPRG00005018931) CACNG2 (ENSCPRG00005018932) IFT27 (ENSCPRG00005018933) PVALB (ENSCPRG00005018934) NCF4 (ENSCPRG00005018935) ENSCPRG00005018936 CSF2RB (ENSCPRG00005018937) TEX33 (ENSCPRG00005018939) Cryptodira ANCESTRAL SPECIES 10 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000154936.qb ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00950000185093 ENSGT00510000048963 ENSGT00390000013198 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000154936.qb ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561.c ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Emydidae ANCESTRAL SPECIES 5 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000154936.qb ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561.c ENSGT00950000185093.a ENSGT00510000048561.d ENSGT00510000048963 Three-toed box turtle MODERN SPECIES 118 CRY1 (ENSTMTG00000017147) ABTB3 (ENSTMTG00000016579) PWP1 (ENSTMTG00000016520) PRDM4 (ENSTMTG00000016498) ASCL4 (ENSTMTG00000016489) RTCB (ENSTMTG00000016470) FBXO7 (ENSTMTG00000016444) ENSTMTG00000016421 SYN3 (ENSTMTG00000016361) ENSTMTG00000016351 LARGE1 (ENSTMTG00000016321) ENSTMTG00000016306 HMGXB4 (ENSTMTG00000016283) TOM1 (ENSTMTG00000016250) HMOX1 (ENSTMTG00000016231) MCM5 (ENSTMTG00000016097) ##22 RASD2 (ENSTMTG00000016077) MB (ENSTMTG00000016063) ENSTMTG00000016038 RBFOX2 (ENSTMTG00000015928) MYH9 (ENSTMTG00000015856) TXN2 (ENSTMTG00000015843) FOXRED2 (ENSTMTG00000015833) EIF3D (ENSTMTG00000015819) CACNG2 (ENSTMTG00000015811) IFT27 (ENSTMTG00000007150) PVALB (ENSTMTG00000007140) NCF4 (ENSTMTG00000007112) ENSTMTG00000007084 TEX33 (ENSTMTG00000007064) TST (ENSTMTG00000007050) painted turtle MODERN SPECIES 2381 MTERF2 (ENSCPBG00000023194) CRY1 (ENSCPBG00000023193) ABTB3 (ENSCPBG00000023191) PWP1 (ENSCPBG00000023189) ASCL4 (ENSCPBG00000023188) PRDM4 (ENSCPBG00000023187) RTCB (ENSCPBG00000023184) ENSCPBG00000023182 TIMP3 (ENSCPBG00000023180) SYN3 (ENSCPBG00000023177) ENSCPBG00000023176 LARGE1 (ENSCPBG00000023171) HMGXB4 (ENSCPBG00000023163) TOM1 (ENSCPBG00000023159) HMOX1 (ENSCPBG00000023157) MCM5 (ENSCPBG00000023156) ##22 RASD2 (ENSCPBG00000023155) ENSCPBG00000023154 RBFOX2 (ENSCPBG00000023144) ENSCPBG00000023141 CACNG2 (ENSCPBG00000023139) IFT27 (ENSCPBG00000023136) PVALB (ENSCPBG00000023134) NCF4 (ENSCPBG00000023126) ENSCPBG00000023124 ENSCPBG00000023115 ENSCPBG00000023112 ENSCPBG00000023105 CSF2RB (ENSCPBG00000023097) ENSCPBG00000023094 TST (ENSCPBG00000023093) Testudinidae ANCESTRAL SPECIES 14 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000154936.qb ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561.c ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Goode s thornscrub tortoise MODERN SPECIES CRY1 (ENSGEVG00005018863) ABTB3 (ENSGEVG00005018959) PWP1 (ENSGEVG00005019049) PRDM4 (ENSGEVG00005019075) ASCL4 (ENSGEVG00005019133) RTCB (ENSGEVG00005019148) FBXO7 (ENSGEVG00005019168) SYN3 (ENSGEVG00005019192) TIMP3 (ENSGEVG00005019220) ENSGEVG00005019237 LARGE1 (ENSGEVG00005019256) ENSGEVG00005019308 HMGXB4 (ENSGEVG00005019321) TOM1 (ENSGEVG00005019332) HMOX1 (ENSGEVG00005019350) MCM5 (ENSGEVG00005019359) ##22 RASD2 (ENSGEVG00005019390) MB (ENSGEVG00005019400) ENSGEVG00005019411 ENSGEVG00005019430 RBFOX2 (ENSGEVG00005019464) MYH9 (ENSGEVG00005019545) TXN2 (ENSGEVG00005019594) FOXRED2 (ENSGEVG00005019608) EIF3D (ENSGEVG00005019633) CACNG2 (ENSGEVG00005019649) IFT27 (ENSGEVG00005019661) PVALB (ENSGEVG00005019674) ENSGEVG00005019693 CSF2RB (ENSGEVG00005019733) ENSGEVG00005019756 Abingdon island giant tortoise MODERN SPECIES 385 ENSCABG00000000053 HMGXB4 (ENSCABG00000000049) ENSCABG00000000033 HMOX1 (ENSCABG00000017375) MCM5 (ENSCABG00000017371) ##22 RASD2 (ENSCABG00000017370) MB (ENSCABG00000017368) ENSCABG00000017364 RBFOX2 (ENSCABG00000017359) Chinese turtle MODERN SPECIES 2219 PWP1 (ENSPSIG00000012219) PRDM4 (ENSPSIG00000012066) ASCL4 (ENSPSIG00000011827) RTCB (ENSPSIG00000011690) BPIFC (ENSPSIG00000011680) FBXO7 (ENSPSIG00000011604) TIMP3 (ENSPSIG00000011576) SYN3 (ENSPSIG00000010823) ENSPSIG00000010811 LARGE1 (ENSPSIG00000010563) ISX (ENSPSIG00000010536) ENSPSIG00000001386 HMGXB4 (ENSPSIG00000010351) TOM1 (ENSPSIG00000008886) HMOX1 (ENSPSIG00000008878) MCM5 (ENSPSIG00000008830) ##22 RASD2 (ENSPSIG00000008824) MB (ENSPSIG00000008494) ENSPSIG00000008215 RBFOX2 (ENSPSIG00000017828) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Episquamata ANCESTRAL SPECIES 3 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT01030000234599.a.a.f ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Laterata ANCESTRAL SPECIES 6 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT01030000234599.a.a.f ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00390000013198 ENSGT00510000046773.a.b Common wall lizard MODERN SPECIES 1 CRY1 (ENSPMRG00000010579) ABTB3 (ENSPMRG00000010347) PWP1 (ENSPMRG00000010290) PRDM4 (ENSPMRG00000010281) ASCL4 (ENSPMRG00000010274) RTCB (ENSPMRG00000010269) FBXO7 (ENSPMRG00000010243) TIMP3 (ENSPMRG00000010226) SYN3 (ENSPMRG00000010198) ENSPMRG00000010189 LARGE1 (ENSPMRG00000010187) ISX (ENSPMRG00000010180) HMGXB4 (ENSPMRG00000010154) TOM1 (ENSPMRG00000010118) HMOX1 (ENSPMRG00000010104) MCM5 (ENSPMRG00000010060) ##22 RASD2 (ENSPMRG00000010047) MB (ENSPMRG00000010043) ENSPMRG00000010037 ENSPMRG00000010032 RBFOX2 (ENSPMRG00000009996) MYH9 (ENSPMRG00000009937) TXN2 (ENSPMRG00000009926) FOXRED2 (ENSPMRG00000009891) EIF3D (ENSPMRG00000009852) CACNG2 (ENSPMRG00000009845) IFT27 (ENSPMRG00000009841) ENSPMRG00000009838 PVALB (ENSPMRG00000009833) NCF4 (ENSPMRG00000009821) ENSPMRG00000009817 Argentine black and white tegu MODERN SPECIES 6 PWP1 (ENSSMRG00000015886) PRDM4 (ENSSMRG00000015885) ASCL4 (ENSSMRG00000015884) RTCB (ENSSMRG00000015883) BPIFC (ENSSMRG00000015882) FBXO7 (ENSSMRG00000015881) TIMP3 (ENSSMRG00000015879) SYN3 (ENSSMRG00000015878) ENSSMRG00000015877 ENSSMRG00000015876 ENSSMRG00000015875 LARGE1 (ENSSMRG00000015873) HMGXB4 (ENSSMRG00000015767) TOM1 (ENSSMRG00000015765) HMOX1 (ENSSMRG00000015763) MCM5 (ENSSMRG00000015760) ##22 RASD2 (ENSSMRG00000015759) MB (ENSSMRG00000015758) ENSSMRG00000015756 ENSSMRG00000015755 ENSSMRG00000015754 ENSSMRG00000015753 ENSSMRG00000015752 RBFOX2 (ENSSMRG00000015751) MYH9 (ENSSMRG00000015750) TXN2 (ENSSMRG00000015749) FOXRED2 (ENSSMRG00000015748) EIF3D (ENSSMRG00000015747) CACNG2 (ENSSMRG00000015746) IFT27 (ENSSMRG00000015745) PVALB (ENSSMRG00000015744) Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.b ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT01030000234881 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT01030000234599.a.a.f ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415.e ENSGT00940000159601 ENSGT00940000155415.f ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00390000013198 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a.a ENSGT00390000006670 ENSGT00940000155415.e ENSGT00940000159601 ENSGT00940000155415.f ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00390000013198 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Acanthophiinae ANCESTRAL SPECIES ENSGT00530000063817.b ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT00390000006670 ENSGT00940000155415.e ENSGT00940000159601 ENSGT00940000158497 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.e ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00390000013198 ENSGT00510000046773.a.b ENSGT00510000046773.a.a Mainland tiger snake MODERN SPECIES 6 MTERF2 (ENSNSUG00000012863) CRY1 (ENSNSUG00000012536) ABTB3 (ENSNSUG00000012378) PWP1 (ENSNSUG00000012377) PRDM4 (ENSNSUG00000012353) ASCL4 (ENSNSUG00000012352) RTCB (ENSNSUG00000012332) FBXO7 (ENSNSUG00000012331) TIMP3 (ENSNSUG00000012330) SYN3 (ENSNSUG00000012326) LARGE1 (ENSNSUG00000012298) ENSNSUG00000012293 HMGXB4 (ENSNSUG00000012291) TOM1 (ENSNSUG00000012289) HMOX1 (ENSNSUG00000012288) MCM5 (ENSNSUG00000012266) ##22 RASD2 (ENSNSUG00000012265) MB (ENSNSUG00000012264) ENSNSUG00000012263 RBFOX2 (ENSNSUG00000012262) MYH9 (ENSNSUG00000005667) TXN2 (ENSNSUG00000005628) FOXRED2 (ENSNSUG00000005616) EIF3D (ENSNSUG00000005445) CACNG2 (ENSNSUG00000005439) IFT27 (ENSNSUG00000005438) PVALB (ENSNSUG00000005437) NCF4 (ENSNSUG00000005429) TEX33 (ENSNSUG00000005423) TST (ENSNSUG00000005421) MPST (ENSNSUG00000005420) Eastern brown snake MODERN SPECIES TMEM263 (ENSPTXG00000008583) MTERF2 (ENSPTXG00000008584) CRY1 (ENSPTXG00000008585) ABTB3 (ENSPTXG00000008586) PWP1 (ENSPTXG00000008587) PRDM4 (ENSPTXG00000008588) ASCL4 (ENSPTXG00000008589) RTCB (ENSPTXG00000008590) FBXO7 (ENSPTXG00000008592) SYN3 (ENSPTXG00000008593) TIMP3 (ENSPTXG00000008595) LARGE1 (ENSPTXG00000008596) HMGXB4 (ENSPTXG00000008598) TOM1 (ENSPTXG00000008599) HMOX1 (ENSPTXG00000008600) MCM5 (ENSPTXG00000008601) ##22 RASD2 (ENSPTXG00000000013) MB (ENSPTXG00000000022) ENSPTXG00000000033 RBFOX2 (ENSPTXG00000000066) MYH9 (ENSPTXG00000000242) TXN2 (ENSPTXG00000000314) FOXRED2 (ENSPTXG00000000340) EIF3D (ENSPTXG00000000738) CACNG2 (ENSPTXG00000000743) IFT27 (ENSPTXG00000000745) PVALB (ENSPTXG00000000747) NCF4 (ENSPTXG00000000766) TEX33 (ENSPTXG00000000815) TST (ENSPTXG00000000818) MPST (ENSPTXG00000000821) Blue-lipped sea krait MODERN SPECIES 1083 HMOX1 (ENSLLTG00000016512) MCM5 (ENSLLTG00000016517) ##22 Indian cobra MODERN SPECIES 6 TMEM263 (ENSNNAG00000012133) MTERF2 (ENSNNAG00000012096) CRY1 (ENSNNAG00000012075) ABTB3 (ENSNNAG00000010714) PWP1 (ENSNNAG00000010602) PRDM4 (ENSNNAG00000010513) ASCL4 (ENSNNAG00000010494) ENSNNAG00000010460 FBXO7 (ENSNNAG00000010430) TIMP3 (ENSNNAG00000010407) SYN3 (ENSNNAG00000010124) LARGE1 (ENSNNAG00000009142) HMGXB4 (ENSNNAG00000009039) TOM1 (ENSNNAG00000008970) HMOX1 (ENSNNAG00000008935) MCM5 (ENSNNAG00000008773) ##22 RASD2 (ENSNNAG00000008739) MB (ENSNNAG00000008723) ENSNNAG00000008468 RBFOX2 (ENSNNAG00000008316) ENSNNAG00000008220 ENSNNAG00000008182 TXN2 (ENSNNAG00000008167) FOXRED2 (ENSNNAG00000008017) EIF3D (ENSNNAG00000007946) CACNG2 (ENSNNAG00000007924) IFT27 (ENSNNAG00000007887) NCF4 (ENSNNAG00000007780) ENSNNAG00000007739 TST (ENSNNAG00000007721) MPST (ENSNNAG00000007697) Lizard MODERN SPECIES 4 RTCB (ENSACAG00000014817) BPIFC (ENSACAG00000032752) FBXO7 (ENSACAG00000014762) SYN3 (ENSACAG00000014584) ENSACAG00000029404 TIMP3 (ENSACAG00000038787) ENSACAG00000038549 ENSACAG00000014469 ENSACAG00000037477 ENSACAG00000039672 ISX (ENSACAG00000042533) HMGXB4 (ENSACAG00000016748) ENSACAG00000034937 TOM1 (ENSACAG00000023996) HMOX1 (ENSACAG00000016659) MCM5 (ENSACAG00000016609) ##22 ENSACAG00000038534 RASD2 (ENSACAG00000039296) MB (ENSACAG00000016595) ENSACAG00000016586 ENSACAG00000040632 ENSACAG00000042837 ENSACAG00000035484 RBFOX2 (ENSACAG00000016535) ENSACAG00000016387 TXN2 (ENSACAG00000040526) FOXRED2 (ENSACAG00000016347) EIF3D (ENSACAG00000016308) CACNG2 (ENSACAG00000040064) IFT27 (ENSACAG00000037025) PVALB (ENSACAG00000016250) tuatara MODERN SPECIES 400 ENSSPUG00000011998 HMGXB4 (ENSSPUG00000011987) TOM1 (ENSSPUG00000011964) HMOX1 (ENSSPUG00000011955) MCM5 (ENSSPUG00000011893) ##22 RASD2 (ENSSPUG00000011864) MB (ENSSPUG00000011818) RBFOX2 (ENSSPUG00000011797) MYH9 (ENSSPUG00000011751) TXN2 (ENSSPUG00000011712) FOXRED2 (ENSSPUG00000011698) EIF3D (ENSSPUG00000011683) Mammalia ANCESTRAL SPECIES 8 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Platypus MODERN SPECIES 5 MTERF2 (ENSOANG00000005531) CRY1 (ENSOANG00000005530) ABTB3 (ENSOANG00000005529) PWP1 (ENSOANG00000005528) PRDM4 (ENSOANG00000005526) ENSOANG00000005525 RTCB (ENSOANG00000005524) BPIFC (ENSOANG00000005523) FBXO7 (ENSOANG00000005522) SYN3 (ENSOANG00000005520) TIMP3 (ENSOANG00000005518) LARGE1 (ENSOANG00000005515) HMGXB4 (ENSOANG00000010868) TOM1 (ENSOANG00000010869) HMOX1 (ENSOANG00000010871) MCM5 (ENSOANG00000010872) ##22 RASD2 (ENSOANG00000010873) MB (ENSOANG00000010874) ENSOANG00000047882 RBFOX2 (ENSOANG00000007489) ENSOANG00000007488 ENSOANG00000043163 ENSOANG00000007487 FOXRED2 (ENSOANG00000007486) EIF3D (ENSOANG00000007483) CACNG2 (ENSOANG00000012849) IFT27 (ENSOANG00000015017) PVALB (ENSOANG00000015016) NCF4 (ENSOANG00000005160) TST (ENSOANG00000004630) KCTD17 (ENSOANG00000046126) Theria ANCESTRAL SPECIES 2 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Marsupialia ANCESTRAL SPECIES 11 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.d ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.r ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Marsupialia_b ANCESTRAL SPECIES 13 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.d ENSGT00940000157534 ENSGT01030000234599.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.r ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Diprotodontia ANCESTRAL SPECIES 8 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.d ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086.r ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Diprotodontia_a ANCESTRAL SPECIES 8 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b.c ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.d ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086.r ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b koala MODERN SPECIES 13 CRY1 (ENSPCIG00000009482) ENSPCIG00000035749 PWP1 (ENSPCIG00000009477) PRDM4 (ENSPCIG00000009471) RTCB (ENSPCIG00000009467) BPIFC (ENSPCIG00000009463) FBXO7 (ENSPCIG00000009460) TIMP3 (ENSPCIG00000034646) ENSPCIG00000009454 LARGE1 (ENSPCIG00000009086) ENSPCIG00000021532 ENSPCIG00000031063 HMGXB4 (ENSPCIG00000021536) TOM1 (ENSPCIG00000021539) ENSPCIG00000001484 MCM5 (ENSPCIG00000001573) ##22 RASD2 (ENSPCIG00000021543) MB (ENSPCIG00000021544) ENSPCIG00000021546 RBFOX2 (ENSPCIG00000021550) MYH9 (ENSPCIG00000021554) ENSPCIG00000021560 FOXRED2 (ENSPCIG00000021562) EIF3D (ENSPCIG00000021563) CACNG2 (ENSPCIG00000021564) ENSPCIG00000021567 NCF4 (ENSPCIG00000012378) ENSPCIG00000036235 ENSPCIG00000036906 TST (ENSPCIG00000021568) ENSPCIG00000021569 Common wonbat MODERN SPECIES 135 CRY1 (ENSVURG00010005080) ENSVURG00010005066 PWP1 (ENSVURG00010005047) PRDM4 (ENSVURG00010005001) ENSVURG00010004985 RTCB (ENSVURG00010004963) ENSVURG00010004947 ENSVURG00010004935 FBXO7 (ENSVURG00010004910) TIMP3 (ENSVURG00010004875) ENSVURG00010004868 LARGE1 (ENSVURG00010004822) HMGXB4 (ENSVURG00010004757) TOM1 (ENSVURG00010004714) ENSVURG00010004705 MCM5 (ENSVURG00010004674) ##22 RASD2 (ENSVURG00010004644) MB (ENSVURG00010004635) ENSVURG00010004629 RBFOX2 (ENSVURG00010004569) ENSVURG00010004524 MYH9 (ENSVURG00010004487) ENSVURG00010004460 FOXRED2 (ENSVURG00010004437) EIF3D (ENSVURG00010004426) CACNG2 (ENSVURG00010004416) IFT27 (ENSVURG00010004395) PVALB (ENSVURG00010004388) NCF4 (ENSVURG00010004370) ENSVURG00010004347 ENSVURG00010004333 Wallaby MODERN SPECIES 897 MCM5 (ENSMEUG00000011052) ##22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000022333 ENSSHAG00000015679 PWP1 (ENSSHAG00000016054) ENSSHAG00000030957 ENSSHAG00000030732 ENSSHAG00000016197 ENSSHAG00000016277 BPIFC (ENSSHAG00000016331) FBXO7 (ENSSHAG00000020844) TIMP3 (ENSSHAG00000021624) LARGE1 (ENSSHAG00000017614) ENSSHAG00000030404 HMGXB4 (ENSSHAG00000018891) TOM1 (ENSSHAG00000022950) HMOX1 (ENSSHAG00000018910) MCM5 (ENSSHAG00000018914) ##22 RASD2 (ENSSHAG00000028224) MB (ENSSHAG00000027233) ENSSHAG00000006374 RBFOX2 (ENSSHAG00000024703) ENSSHAG00000023905 ENSSHAG00000000670 MYH9 (ENSSHAG00000010154) FOXRED2 (ENSSHAG00000011101) EIF3D (ENSSHAG00000011209) CACNG2 (ENSSHAG00000028255) IFT27 (ENSSHAG00000012558) PVALB (ENSSHAG00000012950) NCF4 (ENSSHAG00000013281) ENSSHAG00000013577 ENSSHAG00000013745 Opossum MODERN SPECIES 7 ENSMODG00000001559 PWP1 (ENSMODG00000001471) PRDM4 (ENSMODG00000001448) ASCL4 (ENSMODG00000024943) RTCB (ENSMODG00000001414) BPIFC (ENSMODG00000001355) FBXO7 (ENSMODG00000001336) ENSMODG00000001320 TIMP3 (ENSMODG00000038536) ENSMODG00000047828 LARGE1 (ENSMODG00000001264) ENSMODG00000001249 HMGXB4 (ENSMODG00000001244) TOM1 (ENSMODG00000025453) ENSMODG00000001163 MCM5 (ENSMODG00000001152) ##22 RASD2 (ENSMODG00000048958) ENSMODG00000001125 ENSMODG00000047122 RBFOX2 (ENSMODG00000001122) ENSMODG00000048993 ENSMODG00000001103 ENSMODG00000041900 ENSMODG00000024931 ENSMODG00000040969 MYH9 (ENSMODG00000001078) ENSMODG00000000837 FOXRED2 (ENSMODG00000000833) EIF3D (ENSMODG00000000821) CACNG2 (ENSMODG00000000799) IFT27 (ENSMODG00000000790) Eutheria ANCESTRAL SPECIES 1 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Glires ANCESTRAL SPECIES 4 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Kangaroo rat MODERN SPECIES 398 Prdm4 (ENSDORG00000015081) Rtcb (ENSDORG00000010855) ENSDORG00000023826 ENSDORG00000001886 Timp3 (ENSDORG00000025070) ENSDORG00000025444 Large1 (ENSDORG00000000870) ENSDORG00000013477 ENSDORG00000026554 ENSDORG00000023738 Hmox1 (ENSDORG00000014342) Mcm5 (ENSDORG00000001925) ##22 Rasd2 (ENSDORG00000013385) Mb (ENSDORG00000014500) Rbfox2 (ENSDORG00000015003) Myh9 (ENSDORG00000003191) ENSDORG00000024016 Foxred2 (ENSDORG00000010490) Eif3d (ENSDORG00000010491) ENSDORG00000010747 Ift27 (ENSDORG00000010642) Ncf4 (ENSDORG00000012845) Tst (ENSDORG00000014755) ENSDORG00000014760 Tmprss6 (ENSDORG00000014761) ENSDORG00000029066 Sstr3 (ENSDORG00000029293) Myomorpha ANCESTRAL SPECIES 2 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.j.a.b ENSGT01030000234599.a.a.b.j.a.a ENSGT01030000234599.a.a.b.j.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Lesser Egyptian jerboa MODERN SPECIES 42 Cry1 (ENSJJAG00000005742) Abtb3 (ENSJJAG00000021891) Pwp1 (ENSJJAG00000000594) ENSJJAG00000022448 Ascl4 (ENSJJAG00000023926) Rtcb (ENSJJAG00000010667) Bpifc (ENSJJAG00000003616) Fbxo7 (ENSJJAG00000007990) Syn3 (ENSJJAG00000000911) Timp3 (ENSJJAG00000000976) Large1 (ENSJJAG00000014636) ENSJJAG00000006423 Hmgxb4 (ENSJJAG00000000668) Tom1 (ENSJJAG00000022962) Hmox1 (ENSJJAG00000007736) Mcm5 (ENSJJAG00000004775) ##22 Rasd2 (ENSJJAG00000001069) Mb (ENSJJAG00000016646) ENSJJAG00000014397 Rbfox2 (ENSJJAG00000014885) ENSJJAG00000007134 Apol8 (ENSJJAG00000007468) Myh9 (ENSJJAG00000007545) ENSJJAG00000011427 Foxred2 (ENSJJAG00000009271) Eif3d (ENSJJAG00000010854) Cacng2 (ENSJJAG00000012975) Ift27 (ENSJJAG00000010050) Pvalb (ENSJJAG00000004895) Ncf4 (ENSJJAG00000011052) ENSJJAG00000015279 Muroidea ANCESTRAL SPECIES 5 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.j.a.b.b ENSGT01030000234599.a.a.b.i ENSGT01030000234599.a.a.b.j.a.b.a ENSGT01030000234599.a.a.b.j.a.a ENSGT01030000234599.a.a.b.j.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 Muroidea_A ANCESTRAL SPECIES 16 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Cricetidae ANCESTRAL SPECIES 7 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Cricetinae ANCESTRAL SPECIES 40 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Chinese hamster chok1gshd MODERN SPECIES 226 Slc6a5 (ENSCGRG00001023261) Nell1 (ENSCGRG00001021306) ENSCGRG00001017824 Ano5 (ENSCGRG00001013749) Slc17a6 (ENSCGRG00001000608) Fancf (ENSCGRG00001000085) Gas2 (ENSCGRG00001018029) Svip (ENSCGRG00001017087) ENSCGRG00001019634 Large1 (ENSCGRG00001017921) ENSCGRG00001015954 Isx (ENSCGRG00001015448) ENSCGRG00001014475 Tom1 (ENSCGRG00001014851) Hmox1 (ENSCGRG00001013097) Mcm5 (ENSCGRG00001009878) ##22 Rasd2 (ENSCGRG00001006448) Iqcm (ENSCGRG00001013562) Nr3c2 (ENSCGRG00001008894) Arhgap10 (ENSCGRG00001015571) Prmt9 (ENSCGRG00001012400) ENSCGRG00001005844 Ednra (ENSCGRG00001005013) Ttc29 (ENSCGRG00001003512) Pou4f2 (ENSCGRG00001001534) ENSCGRG00001013716 Slc10a7 (ENSCGRG00001018803) Lsm6 (ENSCGRG00001017142) Zfp827 (ENSCGRG00001020514) 1700011L22Rik (ENSCGRG00001015849) ENSCGRG00001014492 Golden Hamster MODERN SPECIES 692 Large1 (ENSMAUG00000000369) Isx (ENSMAUG00000015145) ENSMAUG00000013765 ENSMAUG00000011338 Tom1 (ENSMAUG00000008183) Hmox1 (ENSMAUG00000000566) Mcm5 (ENSMAUG00000020308) ##22 Rasd2 (ENSMAUG00000020723) ENSMAUG00000019651 Iqcm (ENSMAUG00000018819) Nr3c2 (ENSMAUG00000005964) ENSMAUG00000020122 Arhgap10 (ENSMAUG00000018597) Prmt9 (ENSMAUG00000012249) ENSMAUG00000008780 Ednra (ENSMAUG00000016677) Ttc29 (ENSMAUG00000010655) Pou4f2 (ENSMAUG00000018882) ENSMAUG00000016659 Slc10a7 (ENSMAUG00000019575) Lsm6 (ENSMAUG00000014938) Zfp827 (ENSMAUG00000012963) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 ENSGT00940000154391.a.a ENSGT00940000160512 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000028995 ENSPEMG00000024621 Ces2f (ENSPEMG00000010068) ENSPEMG00000005595 ENSPEMG00000006982 ENSPEMG00000024673 ENSPEMG00000027421 ENSPEMG00000025734 ENSPEMG00000026049 ENSPEMG00000024290 Large1 (ENSPEMG00000009679) Isx (ENSPEMG00000001368) Hmgxb4 (ENSPEMG00000019138) Tom1 (ENSPEMG00000011321) Hmox1 (ENSPEMG00000012144) Mcm5 (ENSPEMG00000015594) ##22 Rasd2 (ENSPEMG00000025461) Iqcm (ENSPEMG00000018718) Nr3c2 (ENSPEMG00000013692) ENSPEMG00000017170 ENSPEMG00000029203 ENSPEMG00000027614 ENSPEMG00000023580 Ednra (ENSPEMG00000013386) Ttc29 (ENSPEMG00000018461) Pou4f2 (ENSPEMG00000027953) ENSPEMG00000006082 Slc10a7 (ENSPEMG00000009109) Lsm6 (ENSPEMG00000012410) Zfp827 (ENSPEMG00000014314) 1700011L22Rik (ENSPEMG00000017156) Murinae ANCESTRAL SPECIES 15 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Mus ANCESTRAL SPECIES 6 ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 ENSGT01050000244840.A.b.a ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Mus_A ANCESTRAL SPECIES 8 ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 ENSGT01050000244840.A.b.a ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Mus_B ANCESTRAL SPECIES 6 ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 ENSGT01050000244840.A.b.a ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Mouse MODERN SPECIES 17 Calr3 (ENSMUSG00000019732) 1700030K09Rik (ENSMUSG00000052794) Cherp (ENSMUSG00000052488) Slc35e1 (ENSMUSG00000019731) Med26 (ENSMUSG00000045248) Smim7 (ENSMUSG00000044600) Tmem38a (ENSMUSG00000031791) Nwd1 (ENSMUSG00000048148) Sin3b (ENSMUSG00000031622) F2rl3 (ENSMUSG00000050147) Large1 (ENSMUSG00000004383) Isx (ENSMUSG00000031621) Hmgxb4 (ENSMUSG00000034518) Tom1 (ENSMUSG00000042870) Hmox1 (ENSMUSG00000005413) Mcm5 (ENSMUSG00000005410) ##22 Rasd2 (ENSMUSG00000034472) Gm10358 (ENSMUSG00000110469) Iqcm (ENSMUSG00000031620) Nr3c2 (ENSMUSG00000031618) Arhgap10 (ENSMUSG00000037148) Prmt9 (ENSMUSG00000037134) Tmem184c (ENSMUSG00000031617) Ednra (ENSMUSG00000031616) Ttc29 (ENSMUSG00000037101) Pou4f2 (ENSMUSG00000031688) Rbmxl1 (ENSMUSG00000037070) Slc10a7 (ENSMUSG00000031684) Lsm6 (ENSMUSG00000031683) Zfp827 (ENSMUSG00000071064) 1700011L22Rik (ENSMUSG00000031682) Mus_C ANCESTRAL SPECIES 5 ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 ENSGT01050000244840.A.b.a ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00390000010038 ENSGT00940000159333 ENSGT00940000159559 ENSGT00940000158472 ENSGT00940000155201 ENSGT01100000263512.a.a.b ENSGT00390000008611 ENSGT00940000160339 ENSGT00940000153425.a.a.b.a ENSGT00390000011932 ENSGT00940000154978 ENSGT00940000156063 ENSGT00520000060562 ENSGT00390000009908 Steppe mouse MODERN SPECIES 3256 ENSMSIG00000010537 Isx (ENSMSIG00000010513) Hmgxb4 (ENSMSIG00000010412) Tom1 (ENSMSIG00000010298) Hmox1 (ENSMSIG00000010278) Mcm5 (ENSMSIG00000010217) ##22 Rasd2 (ENSMSIG00000010205) ENSMSIG00000010198 Iqcm (ENSMSIG00000010162) ENSMSIG00000010122 Nr3c2 (ENSMSIG00000009936) Arhgap10 (ENSMSIG00000009480) Prmt9 (ENSMSIG00000009405) Tmem184c (ENSMSIG00000009359) Ednra (ENSMSIG00000009317) spretus MODERN SPECIES 17 Calr3 (MGP_SPRETEiJ_G0032339) 1700030K09Rik (MGP_SPRETEiJ_G0032340) Cherp (MGP_SPRETEiJ_G0032341) Slc35e1 (MGP_SPRETEiJ_G0032342) Med26 (MGP_SPRETEiJ_G0032343) Smim7 (MGP_SPRETEiJ_G0032344) Tmem38a (MGP_SPRETEiJ_G0032345) Nwd1 (MGP_SPRETEiJ_G0032346) Sin3b (MGP_SPRETEiJ_G0032347) F2rl3 (MGP_SPRETEiJ_G0032348) Large1 (MGP_SPRETEiJ_G0032349) Isx (MGP_SPRETEiJ_G0032350) Hmgxb4 (MGP_SPRETEiJ_G0032351) Tom1 (MGP_SPRETEiJ_G0032352) Hmox1 (MGP_SPRETEiJ_G0032353) Mcm5 (MGP_SPRETEiJ_G0032354) ##22 Rasd2 (MGP_SPRETEiJ_G0032355) Iqcm (MGP_SPRETEiJ_G0032356) Nr3c2 (MGP_SPRETEiJ_G0032357) Arhgap10 (MGP_SPRETEiJ_G0032358) Prmt9 (MGP_SPRETEiJ_G0032359) Tmem184c (MGP_SPRETEiJ_G0032360) Ednra (MGP_SPRETEiJ_G0032361) Ttc29 (MGP_SPRETEiJ_G0032362) Pou4f2 (MGP_SPRETEiJ_G0032363) Slc10a7 (MGP_SPRETEiJ_G0032364) Lsm6 (MGP_SPRETEiJ_G0032365) MGP_SPRETEiJ_G0032366 1700011L22Rik (MGP_SPRETEiJ_G0032367) Mmaa (MGP_SPRETEiJ_G0032368) Smad1 (MGP_SPRETEiJ_G0032369) Ryukyu mouse MODERN SPECIES 17 Calr3 (MGP_CAROLIEiJ_G0031218) 1700030K09Rik (MGP_CAROLIEiJ_G0031219) Cherp (MGP_CAROLIEiJ_G0031220) Slc35e1 (MGP_CAROLIEiJ_G0031221) Med26 (MGP_CAROLIEiJ_G0031222) Smim7 (MGP_CAROLIEiJ_G0031223) Tmem38a (MGP_CAROLIEiJ_G0031224) Nwd1 (MGP_CAROLIEiJ_G0031225) Sin3b (MGP_CAROLIEiJ_G0031226) F2rl3 (MGP_CAROLIEiJ_G0031227) Large1 (MGP_CAROLIEiJ_G0031228) Isx (MGP_CAROLIEiJ_G0031229) MGP_CAROLIEiJ_G0031230 Tom1 (MGP_CAROLIEiJ_G0031231) Hmox1 (MGP_CAROLIEiJ_G0031232) Mcm5 (MGP_CAROLIEiJ_G0031233) ##22 Rasd2 (MGP_CAROLIEiJ_G0031234) Iqcm (MGP_CAROLIEiJ_G0031235) Nr3c2 (MGP_CAROLIEiJ_G0031236) Arhgap10 (MGP_CAROLIEiJ_G0031237) Prmt9 (MGP_CAROLIEiJ_G0031238) Tmem184c (MGP_CAROLIEiJ_G0031239) Ednra (MGP_CAROLIEiJ_G0031240) Ttc29 (MGP_CAROLIEiJ_G0031241) Pou4f2 (MGP_CAROLIEiJ_G0031242) MGP_CAROLIEiJ_G0031243 Slc10a7 (MGP_CAROLIEiJ_G0031244) Lsm6 (MGP_CAROLIEiJ_G0031245) MGP_CAROLIEiJ_G0031246 1700011L22Rik (MGP_CAROLIEiJ_G0031247) Mmaa (MGP_CAROLIEiJ_G0031248) Shrew mouse MODERN SPECIES 10 Calr3 (MGP_PahariEiJ_G0021683) 1700030K09Rik (MGP_PahariEiJ_G0021684) Cherp (MGP_PahariEiJ_G0021685) Slc35e1 (MGP_PahariEiJ_G0021686) Med26 (MGP_PahariEiJ_G0021687) Smim7 (MGP_PahariEiJ_G0021688) Tmem38a (MGP_PahariEiJ_G0021689) Nwd1 (MGP_PahariEiJ_G0021690) Sin3b (MGP_PahariEiJ_G0021691) F2rl3 (MGP_PahariEiJ_G0021692) Large1 (MGP_PahariEiJ_G0021693) Isx (MGP_PahariEiJ_G0021694) Hmgxb4 (MGP_PahariEiJ_G0021695) Tom1 (MGP_PahariEiJ_G0021696) Hmox1 (MGP_PahariEiJ_G0021697) Mcm5 (MGP_PahariEiJ_G0021698) ##22 Rasd2 (MGP_PahariEiJ_G0021699) Rat MODERN SPECIES 10 Mt3 (ENSRNOG00000018958) Mt4 (ENSRNOG00000019004) Bbs2 (ENSRNOG00000019020) Ogfod1 (ENSRNOG00000019288) Nudt21 (ENSRNOG00000042983) Amfr (ENSRNOG00000055446) Gnao1 (ENSRNOG00000019482) Ces5a (ENSRNOG00000025710) Large1 (ENSRNOG00000013742) AABR07042875.1 (ENSRNOG00000013839) RGD1561919 (ENSRNOG00000033451) Isx (ENSRNOG00000039808) Hmgxb4 (ENSRNOG00000013878) Tom1 (ENSRNOG00000014093) Hmox1 (ENSRNOG00000014117) Mcm5 (ENSRNOG00000014336) ##22 Rasd2 (ENSRNOG00000014761) ENSRNOG00000062467 LOC100909916 (ENSRNOG00000032666) Ces1d (ENSRNOG00000015438) Ces1c (ENSRNOG00000069004) Ces1a (ENSRNOG00000039725) Slc6a2 (ENSRNOG00000016311) Lpcat2 (ENSRNOG00000016643) Mmp2 (ENSRNOG00000016695) Irx6 (ENSRNOG00000011037) Irx5 (ENSRNOG00000011180) Irx3 (ENSRNOG00000011533) Fto (ENSRNOG00000011728) Rpgrip1l (ENSRNOG00000011829) Aktip (ENSRNOG00000011956) Upper Galilee mountains blind mole rat MODERN SPECIES 1224 Cry1 (ENSNGAG00000020732) Abtb3 (ENSNGAG00000011417) Pwp1 (ENSNGAG00000015833) Prdm4 (ENSNGAG00000018627) Rtcb (ENSNGAG00000005093) Bpifc (ENSNGAG00000017966) Fbxo7 (ENSNGAG00000001868) Timp3 (ENSNGAG00000001289) Syn3 (ENSNGAG00000016508) Large1 (ENSNGAG00000010206) Isx (ENSNGAG00000017683) ENSNGAG00000005159 ENSNGAG00000000700 Tom1 (ENSNGAG00000017013) Hmox1 (ENSNGAG00000020536) Mcm5 (ENSNGAG00000010698) ##22 Rasd2 (ENSNGAG00000005156) Mb (ENSNGAG00000003211) Apol6 (ENSNGAG00000020118) Rbfox2 (ENSNGAG00000020528) ENSNGAG00000014180 ENSNGAG00000010568 ENSNGAG00000003646 ENSNGAG00000003381 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Sciuridae ANCESTRAL SPECIES 14 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00900000141239.B ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Marmotini ANCESTRAL SPECIES 4 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00900000141239.B ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b.g.a ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a.g ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Marmotini_b ANCESTRAL SPECIES 3 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000159601 ENSGT00940000155415 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00900000141239.B ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b.g.a ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a.g ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00950000185093 Arctic ground squirrel MODERN SPECIES 439 ENSUPAG00010000979 ISX (ENSUPAG00010000959) ENSUPAG00010000928 ENSUPAG00010000921 TOM1 (ENSUPAG00010000902) ENSUPAG00010000893 MCM5 (ENSUPAG00010000876) ##22 ENSUPAG00010000864 MB (ENSUPAG00010000827) Squirrel MODERN SPECIES 92 PWP1 (ENSSTOG00000026312) PRDM4 (ENSSTOG00000016168) ASCL4 (ENSSTOG00000024612) RTCB (ENSSTOG00000003878) BPIFC (ENSSTOG00000015570) FBXO7 (ENSSTOG00000021948) TIMP3 (ENSSTOG00000023341) SYN3 (ENSSTOG00000003581) ENSSTOG00000028608 ENSSTOG00000028474 LARGE1 (ENSSTOG00000021379) ISX (ENSSTOG00000020661) HMGXB4 (ENSSTOG00000009433) TOM1 (ENSSTOG00000008902) HMOX1 (ENSSTOG00000008923) MCM5 (ENSSTOG00000013631) ##22 RASD2 (ENSSTOG00000021657) MB (ENSSTOG00000005623) RBFOX2 (ENSSTOG00000014841) MYH9 (ENSSTOG00000028086) TXN2 (ENSSTOG00000026417) FOXRED2 (ENSSTOG00000005972) EIF3D (ENSSTOG00000011335) CACNG2 (ENSSTOG00000033487) IFT27 (ENSSTOG00000026779) PVALB (ENSSTOG00000009173) NCF4 (ENSSTOG00000021761) ENSSTOG00000023588 TST (ENSSTOG00000021415) MPST (ENSSTOG00000006541) KCTD17 (ENSSTOG00000021908) Alpin marmot MODERN SPECIES 11 PWP1 (ENSMMMG00000016996) PRDM4 (ENSMMMG00000016969) RTCB (ENSMMMG00000016958) BPIFC (ENSMMMG00000016944) FBXO7 (ENSMMMG00000016939) TIMP3 (ENSMMMG00000016936) SYN3 (ENSMMMG00000016926) ENSMMMG00000016919 ENSMMMG00000016912 ENSMMMG00000016906 LARGE1 (ENSMMMG00000016881) ISX (ENSMMMG00000016864) HMGXB4 (ENSMMMG00000016847) TOM1 (ENSMMMG00000016840) ENSMMMG00000016831 MCM5 (ENSMMMG00000016804) ##22 RASD2 (ENSMMMG00000016799) MB (ENSMMMG00000016789) ENSMMMG00000016786 ENSMMMG00000016784 RBFOX2 (ENSMMMG00000016528) ENSMMMG00000016523 MYH9 (ENSMMMG00000016499) TXN2 (ENSMMMG00000016491) FOXRED2 (ENSMMMG00000016478) EIF3D (ENSMMMG00000016472) CACNG2 (ENSMMMG00000016465) IFT27 (ENSMMMG00000016462) PVALB (ENSMMMG00000016453) NCF4 (ENSMMMG00000016440) CSF2RB (ENSMMMG00000015246) Eurasian red squirrel MODERN SPECIES 14 PRDM4 (ENSSVLG00005015092) ASCL4 (ENSSVLG00005015197) RTCB (ENSSVLG00005015218) BPIFC (ENSSVLG00005015293) ENSSVLG00005015555 FBXO7 (ENSSVLG00005015587) SYN3 (ENSSVLG00005015786) TIMP3 (ENSSVLG00005016020) LARGE1 (ENSSVLG00005016069) ENSSVLG00005016143 ENSSVLG00005016204 ISX (ENSSVLG00005016243) HMGXB4 (ENSSVLG00005016292) TOM1 (ENSSVLG00005016329) ENSSVLG00005016423 MCM5 (ENSSVLG00005016456) ##22 ENSSVLG00005016531 MB (ENSSVLG00005016569) RBFOX2 (ENSSVLG00005016647) ENSSVLG00005016959 MYH9 (ENSSVLG00005017145) TXN2 (ENSSVLG00005017265) FOXRED2 (ENSSVLG00005017342) EIF3D (ENSSVLG00005017443) ENSSVLG00005017489 CACNG2 (ENSSVLG00005017514) IFT27 (ENSSVLG00005017578) PVALB (ENSSVLG00005017748) NCF4 (ENSSVLG00005017844) ENSSVLG00005017906 ENSSVLG00005018382 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00530000063817.b ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000169569 ENSGT00940000153544.b Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000045286 ENSHGLG00000041141 ENSHGLG00000046568 ENSHGLG00000003076 ENSHGLG00000001115 ENSHGLG00000048867 ENSHGLG00000002041 ENSHGLG00000005865 ENSHGLG00000004774 ENSHGLG00000000234 ENSHGLG00000043321 ENSHGLG00000015276 HMGXB4 (ENSHGLG00000037083) TOM1 (ENSHGLG00000015296) HMOX1 (ENSHGLG00000008950) MCM5 (ENSHGLG00000008256) ##22 RASD2 (ENSHGLG00000007940) ENSHGLG00000007308 ENSHGLG00000006549 ENSHGLG00000036993 ARHGAP19 (ENSHGLG00000043596) ENSHGLG00000039731 FRAT2 (ENSHGLG00000021387) RRP12 (ENSHGLG00000016772) PGAM1 (ENSHGLG00000016865) EXOSC1 (ENSHGLG00000016927) ZDHHC16 (ENSHGLG00000017705) MMS19 (ENSHGLG00000019329) UBTD1 (ENSHGLG00000006858) ANKRD2 (ENSHGLG00000008161) ENSHGLG00000033035 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00390000013899.a.a.f ENSGT00530000063817.b ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000169569 ENSGT00940000153544.b Guinea pig MODERN SPECIES 140 TMEM263 (ENSCPOG00000039655) MTERF2 (ENSCPOG00000006958) CRY1 (ENSCPOG00000005154) ABTB3 (ENSCPOG00000010157) PWP1 (ENSCPOG00000010166) PRDM4 (ENSCPOG00000022385) BPIFC (ENSCPOG00000014466) FBXO7 (ENSCPOG00000014470) SYN3 (ENSCPOG00000007306) TIMP3 (ENSCPOG00000033730) LARGE1 (ENSCPOG00000014769) HMGXB4 (ENSCPOG00000006133) TOM1 (ENSCPOG00000008228) HMOX1 (ENSCPOG00000023588) MCM5 (ENSCPOG00000021931) ##22 RASD2 (ENSCPOG00000036437) MB (ENSCPOG00000034623) ENSCPOG00000036847 ENSCPOG00000036769 Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00390000013899.a.a.f ENSGT00530000063817.b ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000153544.b Long-tailed chinchilla MODERN SPECIES 112 TMEM263 (ENSCLAG00000010787) MTERF2 (ENSCLAG00000017737) CRY1 (ENSCLAG00000012889) ABTB3 (ENSCLAG00000009148) PWP1 (ENSCLAG00000007078) PRDM4 (ENSCLAG00000007545) RTCB (ENSCLAG00000007997) BPIFC (ENSCLAG00000008466) FBXO7 (ENSCLAG00000009032) SYN3 (ENSCLAG00000013480) TIMP3 (ENSCLAG00000009472) LARGE1 (ENSCLAG00000010025) HMGXB4 (ENSCLAG00000010735) TOM1 (ENSCLAG00000011464) HMOX1 (ENSCLAG00000012150) MCM5 (ENSCLAG00000012629) ##22 RASD2 (ENSCLAG00000016851) MB (ENSCLAG00000008799) STK38L (ENSCLAG00000009242) Degu MODERN SPECIES 79 ENSODEG00000019264 B3GLCT (ENSODEG00000005559) RXFP2 (ENSODEG00000008146) FRY (ENSODEG00000006572) ZAR1L (ENSODEG00000005981) ENSODEG00000007088 ENSODEG00000009214 ENSODEG00000005727 N4BP2L2 (ENSODEG00000006521) ENSODEG00000006412 PDS5B (ENSODEG00000006819) ENSODEG00000019263 KL (ENSODEG00000006590) STARD13 (ENSODEG00000006691) ENSODEG00000007112 MCM5 (ENSODEG00000005912) ##22 NBEA (ENSODEG00000006275) ENSODEG00000008552 MAB21L1 (ENSODEG00000019299) ENSODEG00000006935 ENSODEG00000019680 DCLK1 (ENSODEG00000006680) ENSODEG00000007164 CCDC169 (ENSODEG00000006643) ENSODEG00000007237 CCNA1 (ENSODEG00000006932) RFXAP (ENSODEG00000010191) ENSODEG00000006771 ALG5 (ENSODEG00000007256) ENSODEG00000009230 ENSODEG00000009776 Lagomorpha ANCESTRAL SPECIES 22 ENSGT00390000017324 ENSGT00940000156443.e ENSGT00940000155911 ENSGT00940000162902 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Rabbit MODERN SPECIES 15 CRY1 (ENSOCUG00000013721) ABTB3 (ENSOCUG00000002716) PWP1 (ENSOCUG00000002724) PRDM4 (ENSOCUG00000012859) ENSOCUG00000008280 FBXO7 (ENSOCUG00000008289) TIMP3 (ENSOCUG00000008310) SYN3 (ENSOCUG00000023426) ENSOCUG00000028004 ENSOCUG00000022351 LARGE1 (ENSOCUG00000001734) ISX (ENSOCUG00000017205) HMGXB4 (ENSOCUG00000010619) TOM1 (ENSOCUG00000010626) HMOX1 (ENSOCUG00000010633) MCM5 (ENSOCUG00000010637) ##22 MB (ENSOCUG00000026126) RBFOX2 (ENSOCUG00000001349) ENSOCUG00000003924 MYH9 (ENSOCUG00000004142) TXN2 (ENSOCUG00000033822) FOXRED2 (ENSOCUG00000006352) EIF3D (ENSOCUG00000006363) CACNG2 (ENSOCUG00000026837) ENSOCUG00000023031 ENSOCUG00000027416 NCF4 (ENSOCUG00000021337) CSF2RB (ENSOCUG00000027344) TEX33 (ENSOCUG00000017054) TST (ENSOCUG00000025894) ENSOCUG00000017755 Pika MODERN SPECIES 5240 ENSOPRG00000016684 ##22 Tree shrew MODERN SPECIES 5941 HMGXB4 (ENSTBEG00000009519) ENSTBEG00000009588 HMOX1 (ENSTBEG00000001215) MCM5 (ENSTBEG00000001686) ##22 MB (ENSTBEG00000002813) ENSTBEG00000003082 ENSTBEG00000003297 Primates ANCESTRAL SPECIES 6 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 29 PRDM4 (ENSMICG00000007807) ENSMICG00000013303 BPIFC (ENSMICG00000013327) FBXO7 (ENSMICG00000013344) TIMP3 (ENSMICG00000045156) SYN3 (ENSMICG00000013351) ENSMICG00000031007 ENSMICG00000045713 ENSMICG00000031013 LARGE1 (ENSMICG00000011834) ENSMICG00000044856 ISX (ENSMICG00000030744) HMGXB4 (ENSMICG00000010131) TOM1 (ENSMICG00000010149) HMOX1 (ENSMICG00000041807) ENSMICG00000010165 ##22 ENSMICG00000002190 ENSMICG00000031301 ENSMICG00000000907 SHANK3 (ENSMICG00000029739) ARSA (ENSMICG00000036714) CHKB (ENSMICG00000044169) MAPK8IP2 (ENSMICG00000000871) CPT1B (ENSMICG00000000856) SYCE3 (ENSMICG00000034240) ENSMICG00000031623 ODF3B (ENSMICG00000027739) TYMP (ENSMICG00000013000) NCAPH2 (ENSMICG00000012958) LMF2 (ENSMICG00000001673) MIOX (ENSMICG00000046648) Mouse lemur MODERN SPECIES 28 ASCC3 (ENSMICG00000008861) ENSMICG00000006313 TBX18 (ENSMICG00000041501) CEP162 (ENSMICG00000012801) MRAP2 (ENSMICG00000012798) CYB5R4 (ENSMICG00000012777) SNAP91 (ENSMICG00000012738) ME1 (ENSMICG00000013756) RWDD2A (ENSMICG00000013751) PGM3 (ENSMICG00000013735) DOP1A (ENSMICG00000009599) UBE3D (ENSMICG00000006683) TPBG (ENSMICG00000046765) IBTK (ENSMICG00000005321) TENT5A (ENSMICG00000006596) ENSMICG00000033445 ##22 BCKDHB (ENSMICG00000003277) TTK (ENSMICG00000003271) LCA5 (ENSMICG00000014607) ELOVL4 (ENSMICG00000026958) SH3BGRL2 (ENSMICG00000037578) HMGN3 (ENSMICG00000012580) PHIP (ENSMICG00000000134) IRAK1BP1 (ENSMICG00000044942) MEI4 (ENSMICG00000038415) HTR1B (ENSMICG00000012414) ENSMICG00000029528 IMPG1 (ENSMICG00000012422) MYO6 (ENSMICG00000012391) SENP6 (ENSMICG00000005250) FILIP1 (ENSMICG00000031943) Lemuriformes_a ANCESTRAL SPECIES 47 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 Coquerels sifaka MODERN SPECIES 317 CRY1 (ENSPCOG00000013265) ABTB3 (ENSPCOG00000027917) PWP1 (ENSPCOG00000008036) PRDM4 (ENSPCOG00000021060) ASCL4 (ENSPCOG00000001848) RTCB (ENSPCOG00000017243) BPIFC (ENSPCOG00000001087) FBXO7 (ENSPCOG00000021458) SYN3 (ENSPCOG00000028816) TIMP3 (ENSPCOG00000019275) LARGE1 (ENSPCOG00000006967) ISX (ENSPCOG00000022811) HMGXB4 (ENSPCOG00000025597) TOM1 (ENSPCOG00000015108) HMOX1 (ENSPCOG00000012482) MCM5 (ENSPCOG00000014472) ##22 RASD2 (ENSPCOG00000011525) MB (ENSPCOG00000003062) APOL6 (ENSPCOG00000024938) RBFOX2 (ENSPCOG00000016273) Greater bamboo lemur MODERN SPECIES 1042 LARGE1 (ENSPSMG00000021540) ISX (ENSPSMG00000021471) HMGXB4 (ENSPSMG00000021460) TOM1 (ENSPSMG00000021348) HMOX1 (ENSPSMG00000021204) MCM5 (ENSPSMG00000021174) ##22 RASD2 (ENSPSMG00000021120) MB (ENSPSMG00000021110) APOL6 (ENSPSMG00000021098) ENSPSMG00000021093 RBFOX2 (ENSPSMG00000021058) Bushbaby MODERN SPECIES 122 ASCL4 (ENSOGAG00000024863) RTCB (ENSOGAG00000001425) BPIFC (ENSOGAG00000001429) FBXO7 (ENSOGAG00000013269) ENSOGAG00000013275 TIMP3 (ENSOGAG00000013278) ENSOGAG00000024673 ENSOGAG00000031122 ENSOGAG00000026699 ENSOGAG00000025079 LARGE1 (ENSOGAG00000000773) ISX (ENSOGAG00000004339) HMGXB4 (ENSOGAG00000024326) TOM1 (ENSOGAG00000015474) HMOX1 (ENSOGAG00000014421) MCM5 (ENSOGAG00000015478) ##22 RASD2 (ENSOGAG00000005656) MB (ENSOGAG00000005651) APOL6 (ENSOGAG00000016971) RBFOX2 (ENSOGAG00000033250) MYH9 (ENSOGAG00000006049) TXN2 (ENSOGAG00000002973) FOXRED2 (ENSOGAG00000002975) EIF3D (ENSOGAG00000002978) CACNG2 (ENSOGAG00000002981) IFT27 (ENSOGAG00000005777) PVALB (ENSOGAG00000005781) NCF4 (ENSOGAG00000005782) CSF2RB (ENSOGAG00000005787) TEX33 (ENSOGAG00000016448) TST (ENSOGAG00000016451) Haplorrhini ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Simiiformes ANCESTRAL SPECIES 27 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f ENSGT01030000234599.a.a.b.e.a ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 Catarrhini ANCESTRAL SPECIES 22 ENSGT01090000260061.c.a.c.b ENSGT00940000155844 ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Hominoidea ANCESTRAL SPECIES 22 ENSGT00940000155844 ENSGT00520000056310.B ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT00390000006865.n ENSGT00910000148268 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00390000015298.d ENSGT01050000244893.c.a.b Hominidae ANCESTRAL SPECIES 21 ENSGT00940000163408.a.b.a ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00390000001810.f ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.a ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 Homo/Pan/Gorilla group ANCESTRAL SPECIES 21 ENSGT00940000160846 ENSGT00950000183151.b.l.b ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00390000001810.f ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT00390000006865.n ENSGT01030000234599.a.a.b.f.a ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 Homo/Pan group ANCESTRAL SPECIES 20 ENSGT00940000160846 ENSGT00950000183151.b.l.b ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00390000001810.f ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT00390000006865.n ENSGT01030000234599.a.a.b.f.a ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 Pan ANCESTRAL SPECIES 23 ENSGT00940000163408.a.b.a ENSGT00910000147251 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00390000001810.f ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT00390000006865.n ENSGT01030000234599.a.a.b.f.a ENSGT01030000234599.a.a.b.e.a ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00390000015298.d Chimpanzee MODERN SPECIES 13 RFPL3 (ENSPTRG00000014286) ENSPTRG00000052165 ENSPTRG00000029441 RTCB (ENSPTRG00000014287) BPIFC (ENSPTRG00000014288) FBXO7 (ENSPTRG00000014290) SYN3 (ENSPTRG00000043964) TIMP3 (ENSPTRG00000014292) ENSPTRG00000048540 LARGE1 (ENSPTRG00000014294) ENSPTRG00000048121 ISX (ENSPTRG00000014295) HMGXB4 (ENSPTRG00000014296) TOM1 (ENSPTRG00000014297) HMOX1 (ENSPTRG00000014298) MCM5 (ENSPTRG00000014299) ##22 RASD2 (ENSPTRG00000014300) MB (ENSPTRG00000023553) ENSPTRG00000044590 APOL6 (ENSPTRG00000050403) APOL5 (ENSPTRG00000014304) ENSPTRG00000049420 RBFOX2 (ENSPTRG00000014305) ENSPTRG00000045233 APOL3 (ENSPTRG00000014306) APOL2 (ENSPTRG00000014308) MYH9 (ENSPTRG00000014309) TXN2 (ENSPTRG00000044105) FOXRED2 (ENSPTRG00000014312) EIF3D (ENSPTRG00000014313) ENSPTRG00000043046 Bonobo MODERN SPECIES 13 ENSPPAG00000040103 ENSPPAG00000028090 RTCB (ENSPPAG00000028667) BPIFC (ENSPPAG00000029071) FBXO7 (ENSPPAG00000030954) SYN3 (ENSPPAG00000033352) TIMP3 (ENSPPAG00000035712) ENSPPAG00000037937 ENSPPAG00000040011 ENSPPAG00000040607 ENSPPAG00000041996 ISX (ENSPPAG00000013707) HMGXB4 (ENSPPAG00000027995) TOM1 (ENSPPAG00000039678) HMOX1 (ENSPPAG00000036164) MCM5 (ENSPPAG00000041723) ##22 RASD2 (ENSPPAG00000019590) MB (ENSPPAG00000036732) ENSPPAG00000038028 APOL6 (ENSPPAG00000039686) APOL5 (ENSPPAG00000043700) ENSPPAG00000029674 RBFOX2 (ENSPPAG00000035653) ENSPPAG00000020307 ENSPPAG00000027201 ENSPPAG00000039031 MYH9 (ENSPPAG00000035338) TXN2 (ENSPPAG00000041391) FOXRED2 (ENSPPAG00000025145) EIF3D (ENSPPAG00000031183) ENSPPAG00000000337 Human MODERN SPECIES 14 SLC5A1 (ENSG00000100170) C22orf42 (ENSG00000205856) RFPL2 (ENSG00000128253) SLC5A4 (ENSG00000100191) RFPL3 (ENSG00000128276) RTCB (ENSG00000100220) BPIFC (ENSG00000184459) FBXO7 (ENSG00000100225) SYN3 (ENSG00000185666) TIMP3 (ENSG00000100234) LARGE1 (ENSG00000133424) ISX (ENSG00000175329) HMGXB4 (ENSG00000100281) TOM1 (ENSG00000100284) HMOX1 (ENSG00000100292) MCM5 (ENSG00000100297) ##22 RASD2 (ENSG00000100302) MB (ENSG00000198125) APOL6 (ENSG00000221963) APOL5 (ENSG00000128313) RBFOX2 (ENSG00000100320) APOL3 (ENSG00000128284) APOL4 (ENSG00000100336) APOL2 (ENSG00000128335) APOL1 (ENSG00000100342) MYH9 (ENSG00000100345) TXN2 (ENSG00000100348) FOXRED2 (ENSG00000100350) EIF3D (ENSG00000100353) CACNG2 (ENSG00000166862) IFT27 (ENSG00000100360) Gorilla MODERN SPECIES 13 SLC5A4 (ENSGGOG00000028377) ENSGGOG00000040487 ENSGGOG00000011399 RTCB (ENSGGOG00000011402) BPIFC (ENSGGOG00000026845) FBXO7 (ENSGGOG00000017158) SYN3 (ENSGGOG00000040761) TIMP3 (ENSGGOG00000013242) LARGE1 (ENSGGOG00000039162) ENSGGOG00000011678 ENSGGOG00000037860 ISX (ENSGGOG00000043853) HMGXB4 (ENSGGOG00000014266) TOM1 (ENSGGOG00000014272) HMOX1 (ENSGGOG00000009660) MCM5 (ENSGGOG00000009666) ##22 RASD2 (ENSGGOG00000000861) MB (ENSGGOG00000011478) ENSGGOG00000026609 APOL6 (ENSGGOG00000004508) APOL5 (ENSGGOG00000015594) ENSGGOG00000040708 RBFOX2 (ENSGGOG00000037332) ENSGGOG00000038709 APOL3 (ENSGGOG00000008060) APOL4 (ENSGGOG00000008063) ENSGGOG00000002009 APOL1 (ENSGGOG00000002011) MYH9 (ENSGGOG00000001852) TXN2 (ENSGGOG00000028091) FOXRED2 (ENSGGOG00000009214) Orangutan MODERN SPECIES 13 ENSPPYG00000012003 ENSPPYG00000011749 ENSPPYG00000036647 RTCB (ENSPPYG00000011752) BPIFC (ENSPPYG00000011753) FBXO7 (ENSPPYG00000011755) SYN3 (ENSPPYG00000011756) TIMP3 (ENSPPYG00000031652) ENSPPYG00000031824 LARGE1 (ENSPPYG00000011758) ISX (ENSPPYG00000011759) ENSPPYG00000036048 HMGXB4 (ENSPPYG00000011760) TOM1 (ENSPPYG00000011761) HMOX1 (ENSPPYG00000011762) MCM5 (ENSPPYG00000011763) ##22 RASD2 (ENSPPYG00000041733) MB (ENSPPYG00000040455) APOL6 (ENSPPYG00000036229) ENSPPYG00000030122 ENSPPYG00000011766 APOL3 (ENSPPYG00000011767) APOL4 (ENSPPYG00000011768) MYH9 (ENSPPYG00000011770) TXN2 (ENSPPYG00000011772) FOXRED2 (ENSPPYG00000011773) EIF3D (ENSPPYG00000011774) CACNG2 (ENSPPYG00000033086) IFT27 (ENSPPYG00000011777) PVALB (ENSPPYG00000011778) ENSPPYG00000011779 Gibbon MODERN SPECIES 22 PCDH18 (ENSNLEG00000013976) SLC7A11 (ENSNLEG00000013991) NOCT (ENSNLEG00000014018) ELF2 (ENSNLEG00000014022) MGARP (ENSNLEG00000033771) NDUFC1 (ENSNLEG00000034036) NAA15 (ENSNLEG00000014091) SLC5A4 (ENSNLEG00000014174) ENSNLEG00000032908 ENSNLEG00000014190 ENSNLEG00000033813 HMGXB4 (ENSNLEG00000014194) TOM1 (ENSNLEG00000014220) HMOX1 (ENSNLEG00000033127) ENSNLEG00000035950 MCM5 (ENSNLEG00000014356) ##22 ENSNLEG00000027344 RASD2 (ENSNLEG00000014374) MB (ENSNLEG00000014375) ENSNLEG00000030094 APOL5 (ENSNLEG00000014384) ENSNLEG00000028137 ENSNLEG00000031148 RBFOX2 (ENSNLEG00000034979) ENSNLEG00000026906 ENSNLEG00000030033 ENSNLEG00000028676 MYH9 (ENSNLEG00000014467) FOXRED2 (ENSNLEG00000014542) EIF3D (ENSNLEG00000014560) ENSNLEG00000028972 Cercopithecidae ANCESTRAL SPECIES 24 ENSGT00520000056310.B ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Cercopithecinae ANCESTRAL SPECIES 21 ENSGT00520000056310.B ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Cercopithecinae_a ANCESTRAL SPECIES 20 ENSGT00520000056310.B ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Macaca ANCESTRAL SPECIES 20 ENSGT01090000260061.c.a.c.b ENSGT00940000155844 ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT01030000234599.a.a.b.e.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b Macaca_a ANCESTRAL SPECIES 20 ENSGT00940000160846 ENSGT01030000240356 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT01100000263493.a.b.b.a.a.b.a.a.b.b.b ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.a.a.b.a ENSGT01100000263493.a.b.a.a.b.b.b.b.a.a.b.b ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.a.a.a ENSGT00910000147444 ENSGT01050000244893.c.a.b Crab-eating macaque MODERN SPECIES 1 RTCB (ENSMFAG00000034419) BPIFC (ENSMFAG00000025303) FBXO7 (ENSMFAG00000037085) TIMP3 (ENSMFAG00000061913) SYN3 (ENSMFAG00000032224) ENSMFAG00000054589 ENSMFAG00000047810 ENSMFAG00000056413 ENSMFAG00000054870 ENSMFAG00000055497 LARGE1 (ENSMFAG00000043989) ISX (ENSMFAG00000002513) HMGXB4 (ENSMFAG00000045206) TOM1 (ENSMFAG00000002824) HMOX1 (ENSMFAG00000042891) MCM5 (ENSMFAG00000037992) ##22 RASD2 (ENSMFAG00000048205) MB (ENSMFAG00000042315) APOL6 (ENSMFAG00000048917) ENSMFAG00000059252 ENSMFAG00000056277 ENSMFAG00000065532 RBFOX2 (ENSMFAG00000031994) APOL4 (ENSMFAG00000031976) APOL2 (ENSMFAG00000063310) ENSMFAG00000052009 ENSMFAG00000056753 MYH9 (ENSMFAG00000035156) TXN2 (ENSMFAG00000034407) FOXRED2 (ENSMFAG00000046365) EIF3D (ENSMFAG00000000481) Rhesus MODERN SPECIES 1 ENSMMUG00000051047 ENSMMUG00000060164 RTCB (ENSMMUG00000006720) BPIFC (ENSMMUG00000006726) FBXO7 (ENSMMUG00000006728) TIMP3 (ENSMMUG00000062825) SYN3 (ENSMMUG00000006732) ENSMMUG00000062246 ENSMMUG00000063041 ENSMMUG00000054691 LARGE1 (ENSMMUG00000012113) ISX (ENSMMUG00000061326) HMGXB4 (ENSMMUG00000012011) TOM1 (ENSMMUG00000013383) HMOX1 (ENSMMUG00000007221) MCM5 (ENSMMUG00000021054) ##22 RASD2 (ENSMMUG00000061659) MB (ENSMMUG00000005034) APOL6 (ENSMMUG00000001050) ENSMMUG00000047203 APOL5 (ENSMMUG00000048463) RBFOX2 (ENSMMUG00000014010) APOL4 (ENSMMUG00000020016) APOL2 (ENSMMUG00000001537) ENSMMUG00000060967 MYH9 (ENSMMUG00000006101) TXN2 (ENSMMUG00000031300) FOXRED2 (ENSMMUG00000012751) EIF3D (ENSMMUG00000012754) ENSMMUG00000062743 CACNG2 (ENSMMUG00000031026) Pig-tailed macaque MODERN SPECIES 208 RFPL2 (ENSMNEG00000030240) SLC5A4 (ENSMNEG00000031753) ENSMNEG00000035780 RTCB (ENSMNEG00000040669) BPIFC (ENSMNEG00000031112) FBXO7 (ENSMNEG00000028153) TIMP3 (ENSMNEG00000023364) SYN3 (ENSMNEG00000040082) LARGE1 (ENSMNEG00000002522) ISX (ENSMNEG00000043053) HMGXB4 (ENSMNEG00000030481) TOM1 (ENSMNEG00000034849) HMOX1 (ENSMNEG00000031353) MCM5 (ENSMNEG00000042266) ##22 RASD2 (ENSMNEG00000031968) Cercopithecinae_b ANCESTRAL SPECIES 22 ENSGT00520000056310.B ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Olive baboon MODERN SPECIES 7 YWHAH (ENSPANG00000041028) SLC5A1 (ENSPANG00000004876) RFPL1 (ENSPANG00000005139) SLC5A4 (ENSPANG00000026319) RTCB (ENSPANG00000016035) BPIFC (ENSPANG00000016603) FBXO7 (ENSPANG00000026268) TIMP3 (ENSPANG00000026318) SYN3 (ENSPANG00000022751) LARGE1 (ENSPANG00000004083) ENSPANG00000032474 ISX (ENSPANG00000037623) HMGXB4 (ENSPANG00000021766) TOM1 (ENSPANG00000015906) HMOX1 (ENSPANG00000041525) MCM5 (ENSPANG00000007031) ##22 RASD2 (ENSPANG00000009931) ENSPANG00000029693 ENSPANG00000021968 ENSPANG00000038186 APOL5 (ENSPANG00000025581) ENSPANG00000047763 RBFOX2 (ENSPANG00000007030) APOL4 (ENSPANG00000008447) APOL2 (ENSPANG00000041027) APOL1 (ENSPANG00000042987) MYH9 (ENSPANG00000012338) TXN2 (ENSPANG00000023981) FOXRED2 (ENSPANG00000017501) EIF3D (ENSPANG00000023980) CACNG2 (ENSPANG00000018615) Cercopithecinae_d ANCESTRAL SPECIES 17 ENSGT00520000056310.B ENSGT00940000163408.a.b.c ENSGT00940000160846 ENSGT00940000164457.B ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000154892.e.b ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f.b ENSGT01030000234599.a.a.b.e.a.a ENSGT01030000234599.a.a.b.e.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Sooty mangabey MODERN SPECIES 474 ENSCATG00000036907 SLC5A4 (ENSCATG00000040639) ENSCATG00000043014 RTCB (ENSCATG00000033424) FBXO7 (ENSCATG00000039724) BPIFC (ENSCATG00000032658) SYN3 (ENSCATG00000044956) TIMP3 (ENSCATG00000042645) ENSCATG00000041580 LARGE1 (ENSCATG00000044223) ENSCATG00000000038 ISX (ENSCATG00000029244) HMGXB4 (ENSCATG00000033136) TOM1 (ENSCATG00000031195) HMOX1 (ENSCATG00000044656) MCM5 (ENSCATG00000043913) ##22 ENSCATG00000017285 RASD2 (ENSCATG00000030322) MB (ENSCATG00000041983) ENSCATG00000034942 APOL6 (ENSCATG00000035231) APOL5 (ENSCATG00000039209) RBFOX2 (ENSCATG00000038655) ENSCATG00000032033 APOL4 (ENSCATG00000038892) APOL2 (ENSCATG00000042649) APOL1 (ENSCATG00000037560) MYH9 (ENSCATG00000030452) TXN2 (ENSCATG00000040632) FOXRED2 (ENSCATG00000041844) EIF3D (ENSCATG00000045003) Drill MODERN SPECIES 751 ENSMLEG00000040675 SLC5A4 (ENSMLEG00000028205) ENSMLEG00000031564 RTCB (ENSMLEG00000040505) BPIFC (ENSMLEG00000033471) FBXO7 (ENSMLEG00000034058) TIMP3 (ENSMLEG00000024244) SYN3 (ENSMLEG00000029958) LARGE1 (ENSMLEG00000032884) ENSMLEG00000035349 ENSMLEG00000031988 ISX (ENSMLEG00000043836) HMGXB4 (ENSMLEG00000019798) TOM1 (ENSMLEG00000017250) HMOX1 (ENSMLEG00000033099) MCM5 (ENSMLEG00000042895) ##22 RASD2 (ENSMLEG00000024297) MB (ENSMLEG00000032335) APOL6 (ENSMLEG00000041540) ENSMLEG00000043579 APOL5 (ENSMLEG00000044220) ENSMLEG00000027277 RBFOX2 (ENSMLEG00000005854) APOL4 (ENSMLEG00000042747) APOL2 (ENSMLEG00000034184) APOL1 (ENSMLEG00000015957) MYH9 (ENSMLEG00000039272) ENSMLEG00000028175 FOXRED2 (ENSMLEG00000041571) EIF3D (ENSMLEG00000037251) ENSMLEG00000041664 Vervet Monkey MODERN SPECIES 10 YWHAH (ENSCSAG00000008504) SLC5A1 (ENSCSAG00000008499) ENSCSAG00000008488 SLC5A4 (ENSCSAG00000008464) ENSCSAG00000008359 RTCB (ENSCSAG00000008351) BPIFC (ENSCSAG00000008309) FBXO7 (ENSCSAG00000008283) SYN3 (ENSCSAG00000008254) TIMP3 (ENSCSAG00000008241) LARGE1 (ENSCSAG00000008233) ISX (ENSCSAG00000008226) HMGXB4 (ENSCSAG00000008220) TOM1 (ENSCSAG00000008210) HMOX1 (ENSCSAG00000008200) MCM5 (ENSCSAG00000008193) ##22 RASD2 (ENSCSAG00000008179) MB (ENSCSAG00000008174) APOL6 (ENSCSAG00000008168) APOL5 (ENSCSAG00000008139) RBFOX2 (ENSCSAG00000008110) APOL4 (ENSCSAG00000008098) MYH9 (ENSCSAG00000007963) TXN2 (ENSCSAG00000007919) FOXRED2 (ENSCSAG00000007910) EIF3D (ENSCSAG00000007898) CACNG2 (ENSCSAG00000007884) IFT27 (ENSCSAG00000007875) PVALB (ENSCSAG00000007866) NCF4 (ENSCSAG00000007823) CSF2RB (ENSCSAG00000007761) Rhinopithecus ANCESTRAL SPECIES 3 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT01050000244842.a.b.a.d.a ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT00860000136165 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT00390000006865.n ENSGT01030000234599.a.a.b.e.a.a ENSGT00910000148268 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 Black snub-nosed monkey MODERN SPECIES 1002 LARGE1 (ENSRBIG00000027647) ISX (ENSRBIG00000040027) HMGXB4 (ENSRBIG00000043685) ENSRBIG00000039744 TOM1 (ENSRBIG00000020691) HMOX1 (ENSRBIG00000031941) MCM5 (ENSRBIG00000035440) ##22 RASD2 (ENSRBIG00000030102) MB (ENSRBIG00000040058) ENSRBIG00000041743 APOL6 (ENSRBIG00000029427) Golden snub-nosed monkey MODERN SPECIES 2721 ISX (ENSRROG00000029856) HMGXB4 (ENSRROG00000042235) ENSRROG00000033025 TOM1 (ENSRROG00000040396) HMOX1 (ENSRROG00000041914) MCM5 (ENSRROG00000034321) ##22 RASD2 (ENSRROG00000033060) MB (ENSRROG00000020662) ENSRROG00000040584 APOL6 (ENSRROG00000041257) APOL5 (ENSRROG00000031622) ENSRROG00000038748 RBFOX2 (ENSRROG00000035715) ENSRROG00000039958 ENSRROG00000044126 APOL2 (ENSRROG00000042092) ENSRROG00000028635 MYH9 (ENSRROG00000030375) ENSRROG00000002624 FOXRED2 (ENSRROG00000019127) EIF3D (ENSRROG00000039588) Platyrrhini ANCESTRAL SPECIES 30 ENSGT00940000155911.y ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.f ENSGT01030000234599.a.a.b.e.a ENSGT00940000155632 ENSGT00530000064086.i ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549.c ENSGT00940000159653.d Cebidae ANCESTRAL SPECIES 31 ENSGT00940000160846 ENSGT00940000155911.y ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.e.a ENSGT00940000155632 ENSGT00530000064086.i ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549.c ENSGT00940000159653.d ENSGT00510000048561 ENSGT00510000048963 Cebidae_a ANCESTRAL SPECIES 40 ENSGT00940000160846 ENSGT00940000155911.y ENSGT01100000263545.a.b.c.a ENSGT00900000143932 ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.e.a ENSGT00940000155632 ENSGT00530000064086.i ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549.c ENSGT00940000159653.d ENSGT00510000048561 ENSGT00510000048963 Capuchin MODERN SPECIES 317 LARGE1 (ENSCCAG00000014556) ISX (ENSCCAG00000007806) HMGXB4 (ENSCCAG00000033825) TOM1 (ENSCCAG00000029278) HMOX1 (ENSCCAG00000022715) MCM5 (ENSCCAG00000034563) ##22 ENSCCAG00000028547 ENSCCAG00000032054 RASD2 (ENSCCAG00000024916) MB (ENSCCAG00000031738) ENSCCAG00000032001 APOL6 (ENSCCAG00000023537) ENSCCAG00000020135 RBFOX2 (ENSCCAG00000036584) Bolivian squirrel monkey MODERN SPECIES 94 ENSSBOG00000029780 ENSSBOG00000027198 FBXO7 (ENSSBOG00000034715) TIMP3 (ENSSBOG00000020035) SYN3 (ENSSBOG00000022799) LARGE1 (ENSSBOG00000025240) ISX (ENSSBOG00000016181) HMGXB4 (ENSSBOG00000028618) TOM1 (ENSSBOG00000024056) HMOX1 (ENSSBOG00000000291) MCM5 (ENSSBOG00000035769) ##22 RASD2 (ENSSBOG00000028390) MB (ENSSBOG00000021573) ENSSBOG00000031135 ENSSBOG00000031659 RBFOX2 (ENSSBOG00000028291) APOL2 (ENSSBOG00000017347) MYH9 (ENSSBOG00000030902) TXN2 (ENSSBOG00000030716) FOXRED2 (ENSSBOG00000033703) EIF3D (ENSSBOG00000032811) CACNG2 (ENSSBOG00000033704) IFT27 (ENSSBOG00000016486) PVALB (ENSSBOG00000026884) NCF4 (ENSSBOG00000024948) CSF2RB (ENSSBOG00000021764) Marmoset MODERN SPECIES MLC1 (ENSCJAG00000003866) SYN3 (ENSCJAG00000006266) TIMP3 (ENSCJAG00000044183) FBXO7 (ENSCJAG00000006238) BPIFC (ENSCJAG00000006209) RTCB (ENSCJAG00000006128) SLC5A4 (ENSCJAG00000044264) ENSCJAG00000078413 LARGE1 (ENSCJAG00000000968) ENSCJAG00000022754 ISX (ENSCJAG00000071825) HMGXB4 (ENSCJAG00000000537) TOM1 (ENSCJAG00000000519) ENSCJAG00000074738 HMOX1 (ENSCJAG00000000516) MCM5 (ENSCJAG00000000511) ##22 RASD2 (ENSCJAG00000000509) MB (ENSCJAG00000000506) ENSCJAG00000071958 APOL6 (ENSCJAG00000080326) ENSCJAG00000019456 ENSCJAG00000079777 MYH9 (ENSCJAG00000013642) ENSCJAG00000069972 ENSCJAG00000072380 TXN2 (ENSCJAG00000038379) ENSCJAG00000076912 FOXRED2 (ENSCJAG00000013822) EIF3D (ENSCJAG00000013831) CACNG2 (ENSCJAG00000013947) IFT27 (ENSCJAG00000013961) Mas night monkey MODERN SPECIES 1303 ISX (ENSANAG00000020801) HMGXB4 (ENSANAG00000032277) TOM1 (ENSANAG00000021234) HMOX1 (ENSANAG00000032355) MCM5 (ENSANAG00000021751) ##22 RASD2 (ENSANAG00000036759) MB (ENSANAG00000020373) Tarsier MODERN SPECIES 2471 MACF1 (ENSTSYG00000011129) MCM5 (ENSTSYG00000034634) ##22 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Eulipotyphla ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Common shrew MODERN SPECIES 71 ENSSARG00000004258 ##22 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Suina ANCESTRAL SPECIES 21 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a.b ENSGT01030000234599.a.a.b.a.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Pig MODERN SPECIES 115 ENSSSCG00000038046 LARGE1 (ENSSSCG00000000959) ENSSSCG00000035336 ENSSSCG00000034188 ISX (ENSSSCG00000040934) HMGXB4 (ENSSSCG00000025780) TOM1 (ENSSSCG00000038943) HMOX1 (ENSSSCG00000039745) MCM5 (ENSSSCG00000022823) ##22 ENSSSCG00000031155 Chacoan peccary MODERN SPECIES 899 ENSCWAG00000020556 ABTB3 (ENSCWAG00000020574) PWP1 (ENSCWAG00000020713) PRDM4 (ENSCWAG00000020729) ASCL4 (ENSCWAG00000020748) RTCB (ENSCWAG00000020751) BPIFC (ENSCWAG00000020779) FBXO7 (ENSCWAG00000020839) SYN3 (ENSCWAG00000020871) TIMP3 (ENSCWAG00000020918) LARGE1 (ENSCWAG00000020937) ISX (ENSCWAG00000020952) HMGXB4 (ENSCWAG00000020965) TOM1 (ENSCWAG00000020986) HMOX1 (ENSCWAG00000021021) MCM5 (ENSCWAG00000021031) ##22 RASD2 (ENSCWAG00000021044) MB (ENSCWAG00000021046) ENSCWAG00000009157 ENSCWAG00000009202 RBFOX2 (ENSCWAG00000009279) ENSCWAG00000009803 ENSCWAG00000009860 MYH9 (ENSCWAG00000010022) TXN2 (ENSCWAG00000010160) FOXRED2 (ENSCWAG00000010196) ENSCWAG00000010243 EIF3D (ENSCWAG00000010284) CACNG2 (ENSCWAG00000010354) IFT27 (ENSCWAG00000010391) PVALB (ENSCWAG00000010515) Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Camelidae ANCESTRAL SPECIES 28 ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963.g ENSGT00510000048963.h Arabian camel MODERN SPECIES 3 BEST3 (ENSCDRG00005019835) LRRC10 (ENSCDRG00005019874) CCT2 (ENSCDRG00005019882) FRS2 (ENSCDRG00005019911) YEATS4 (ENSCDRG00005019927) ENSCDRG00005019957 ENSCDRG00005019999 ENSCDRG00005020007 ENSCDRG00005020017 ENSCDRG00005020027 LARGE1 (ENSCDRG00005020049) ISX (ENSCDRG00005020112) HMGXB4 (ENSCDRG00005020131) TOM1 (ENSCDRG00005020168) HMOX1 (ENSCDRG00005020203) MCM5 (ENSCDRG00005020220) ##22 RASD2 (ENSCDRG00005020242) MB (ENSCDRG00005020248) ENSCDRG00005020253 RBFOX2 (ENSCDRG00005020273) ENSCDRG00005020513 ENSCDRG00005020526 ENSCDRG00005020534 ENSCDRG00005020540 MYH9 (ENSCDRG00005020548) TXN2 (ENSCDRG00005020570) FOXRED2 (ENSCDRG00005020576) EIF3D (ENSCDRG00005020597) CACNG2 (ENSCDRG00005020610) IFT27 (ENSCDRG00005020614) PVALB (ENSCDRG00005020625) Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Cetacea ANCESTRAL SPECIES 8 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670.c ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436.c ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670.c ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436.c ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670.c ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436.c ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Dolphin MODERN SPECIES 4887 HMOX1 (ENSTTRG00000007342) MCM5 (ENSTTRG00000007339) ##22 RASD2 (ENSTTRG00000007338) MB (ENSTTRG00000007336) Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670.c ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436.c ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Vaquita MODERN SPECIES 1 PWP1 (ENSPSNG00000008057) PRDM4 (ENSPSNG00000008025) ASCL4 (ENSPSNG00000008008) RTCB (ENSPSNG00000007975) BPIFC (ENSPSNG00000007789) ENSPSNG00000007677 TIMP3 (ENSPSNG00000007633) SYN3 (ENSPSNG00000007457) ENSPSNG00000007432 ENSPSNG00000007418 LARGE1 (ENSPSNG00000007365) ISX (ENSPSNG00000007292) HMGXB4 (ENSPSNG00000007249) TOM1 (ENSPSNG00000007151) HMOX1 (ENSPSNG00000007094) MCM5 (ENSPSNG00000007028) ##22 RASD2 (ENSPSNG00000006955) MB (ENSPSNG00000006842) ENSPSNG00000006821 RBFOX2 (ENSPSNG00000006691) ENSPSNG00000006613 ENSPSNG00000006553 ENSPSNG00000006542 MYH9 (ENSPSNG00000006507) TXN2 (ENSPSNG00000006453) FOXRED2 (ENSPSNG00000006419) EIF3D (ENSPSNG00000006354) CACNG2 (ENSPSNG00000006316) IFT27 (ENSPSNG00000006292) PVALB (ENSPSNG00000006241) NCF4 (ENSPSNG00000006176) Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670.c ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436.c ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Narwhal MODERN SPECIES 313 ABTB3 (ENSMMNG00015017614) PWP1 (ENSMMNG00015017855) PRDM4 (ENSMMNG00015017886) ASCL4 (ENSMMNG00015017916) RTCB (ENSMMNG00015017939) BPIFC (ENSMMNG00015018003) ENSMMNG00015018129 SYN3 (ENSMMNG00015015865) TIMP3 (ENSMMNG00015015920) LARGE1 (ENSMMNG00015015970) ISX (ENSMMNG00015016078) ENSMMNG00015016131 TOM1 (ENSMMNG00015016193) ENSMMNG00015016312 HMOX1 (ENSMMNG00015016338) MCM5 (ENSMMNG00015016403) ##22 RASD2 (ENSMMNG00015016512) Mb (ENSMMNG00015016538) ENSMMNG00015016564 RBFOX2 (ENSMMNG00015016607) ENSMMNG00015016718 MYH9 (ENSMMNG00015016807) TXN2 (ENSMMNG00015016881) FOXRED2 (ENSMMNG00015016918) EIF3D (ENSMMNG00015017046) CACNG2 (ENSMMNG00015017082) IFT27 (ENSMMNG00015017117) PVALB (ENSMMNG00015017170) NCF4 (ENSMMNG00015017207) CSF2RB (ENSMMNG00015017271) TEX33 (ENSMMNG00015017317) Beluga whale MODERN SPECIES 45 ASCL4 (ENSDLEG00000005863) RTCB (ENSDLEG00000005884) BPIFC (ENSDLEG00000005896) ENSDLEG00000005924 FBXO7 (ENSDLEG00000005928) ENSDLEG00000005935 TIMP3 (ENSDLEG00000005945) ENSDLEG00000005955 ENSDLEG00000005960 LARGE1 (ENSDLEG00000005976) ISX (ENSDLEG00000006004) HMGXB4 (ENSDLEG00000006017) TOM1 (ENSDLEG00000006048) ENSDLEG00000006060 HMOX1 (ENSDLEG00000006069) MCM5 (ENSDLEG00000006077) ##22 RASD2 (ENSDLEG00000006101) MB (ENSDLEG00000006105) ENSDLEG00000006116 RBFOX2 (ENSDLEG00000006133) ENSDLEG00000006196 MYH9 (ENSDLEG00000006223) TXN2 (ENSDLEG00000006300) FOXRED2 (ENSDLEG00000006305) EIF3D (ENSDLEG00000006311) CACNG2 (ENSDLEG00000006339) IFT27 (ENSDLEG00000006343) PVALB (ENSDLEG00000006345) ENSDLEG00000006358 Sperm whale MODERN SPECIES 17 PWP1 (ENSPCTG00005005308) PRDM4 (ENSPCTG00005005379) ASCL4 (ENSPCTG00005005435) RTCB (ENSPCTG00005005448) BPIFC (ENSPCTG00005005486) FBXO7 (ENSPCTG00005005592) SYN3 (ENSPCTG00005005664) TIMP3 (ENSPCTG00005005768) HIGD1A (ENSPCTG00005005789) ENSPCTG00005005801 LARGE1 (ENSPCTG00005005832) ISX (ENSPCTG00005005884) HMGXB4 (ENSPCTG00005005913) TOM1 (ENSPCTG00005005958) HMOX1 (ENSPCTG00005006045) MCM5 (ENSPCTG00005006087) ##22 RASD2 (ENSPCTG00005006153) ENSPCTG00005006169 RBFOX2 (ENSPCTG00005006217) ENSPCTG00005006392 MYH9 (ENSPCTG00005006416) TST (ENSPCTG00005006629) CACNG2 (ENSPCTG00005006651) NCF4 (ENSPCTG00005006682) ENSPCTG00005006739 IL2RB (ENSPCTG00005006812) RAC2 (ENSPCTG00005006868) CYTH4 (ENSPCTG00005006948) ELFN2 (ENSPCTG00005007175) MFNG (ENSPCTG00005007210) ENSPCTG00005007291 Blue whale MODERN SPECIES 1 PWP1 (ENSBMSG00010008246) PRDM4 (ENSBMSG00010008261) ASCL4 (ENSBMSG00010008273) RTCB (ENSBMSG00010008283) BPIFC (ENSBMSG00010008317) ENSBMSG00010008405 ENSBMSG00010008482 TIMP3 (ENSBMSG00010008497) ENSBMSG00010008510 ENSBMSG00010008524 LARGE1 (ENSBMSG00010008540) ISX (ENSBMSG00010008567) ENSBMSG00010008585 TOM1 (ENSBMSG00010008611) HMOX1 (ENSBMSG00010008652) MCM5 (ENSBMSG00010008707) ##22 RASD2 (ENSBMSG00010008750) MB (ENSBMSG00010008760) ENSBMSG00010008768 RBFOX2 (ENSBMSG00010008779) ENSBMSG00010008845 ENSBMSG00010008850 ENSBMSG00010008858 MYH9 (ENSBMSG00010008962) TXN2 (ENSBMSG00010009009) FOXRED2 (ENSBMSG00010009020) EIF3D (ENSBMSG00010009034) CACNG2 (ENSBMSG00010009048) IFT27 (ENSBMSG00010009058) PVALB (ENSBMSG00010009078) NCF4 (ENSBMSG00010009095) Pecora ANCESTRAL SPECIES 3 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Percora_a ANCESTRAL SPECIES 3 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.a.b ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.a.b ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT00910000147444 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Caprinae ANCESTRAL SPECIES ENSGT00940000162902 ENSGT00940000155911.r ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.b.a ENSGT01030000234599.a.a.b.a.b.a.a.b.d ENSGT01030000234599.a.a.b.a.b.b.b ENSGT01030000234599.a.a.b.a.a.c.b.g.a.a ENSGT01030000234599.a.a.b.a.a.c.b.g.a.b ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 Rambouillet Sheep MODERN SPECIES 19 RTCB (ENSOARG00020019202) BPIFC (ENSOARG00020019298) FBXO7 (ENSOARG00020019506) SYN3 (ENSOARG00020019574) TIMP3 (ENSOARG00020019876) ENSOARG00020019922 ENSOARG00020019968 ENSOARG00020019998 ENSOARG00020020040 ENSOARG00020020072 LARGE1 (ENSOARG00020020109) ISX (ENSOARG00020020278) HMGXB4 (ENSOARG00020020362) TOM1 (ENSOARG00020020401) HMOX1 (ENSOARG00020020535) MCM5 (ENSOARG00020020578) ##22 RASD2 (ENSOARG00020020755) MB (ENSOARG00020020783) ENSOARG00020020834 RBFOX2 (ENSOARG00020020897) ENSOARG00020021385 ENSOARG00020021412 ENSOARG00020021451 ENSOARG00020021496 ENSOARG00020021519 ENSOARG00020021555 MYH9 (ENSOARG00020021571) TXN2 (ENSOARG00020021798) FOXRED2 (ENSOARG00020021834) EIF3D (ENSOARG00020021925) CACNG2 (ENSOARG00020021970) Goat MODERN SPECIES 24 BPIFC (ENSCHIG00000021447) FBXO7 (ENSCHIG00000025643) ENSCHIG00000019205 ENSCHIG00000007497 TIMP3 (ENSCHIG00000022544) ENSCHIG00000011931 ENSCHIG00000024931 ENSCHIG00000024510 ENSCHIG00000026622 LARGE1 (ENSCHIG00000015609) ENSCHIG00000011042 ISX (ENSCHIG00000011420) HMGXB4 (ENSCHIG00000025039) TOM1 (ENSCHIG00000024191) HMOX1 (ENSCHIG00000016700) MCM5 (ENSCHIG00000011442) ##22 RASD2 (ENSCHIG00000015969) MB (ENSCHIG00000008000) ENSCHIG00000024340 RBFOX2 (ENSCHIG00000014027) ENSCHIG00000010319 ENSCHIG00000025286 ENSCHIG00000012087 ENSCHIG00000012073 ENSCHIG00000001541 ENSCHIG00000016644 ENSCHIG00000017105 ENSCHIG00000009820 ENSCHIG00000024880 ENSCHIG00000019750 ENSCHIG00000010282 Bovinae ANCESTRAL SPECIES 10 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.a.a.b.b.a ENSGT01030000234599.a.a.b.a.b.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a ENSGT01030000234599.a.a.b.a.a.c.b.e.a ENSGT01030000234599.a.a.b.a.a.c.b.f ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 Bos ANCESTRAL SPECIES 2 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.a.a.b.b.a ENSGT01030000234599.a.a.b.a.b.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.a.c.b.e.a ENSGT01030000234599.a.a.b.a.a.c.b.f ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 Bos_a ANCESTRAL SPECIES 3 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.b ENSGT01030000234599.a.a.b.a.a.c.b.e.a ENSGT01030000234599.a.a.b.a.a.c.b.f ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 Wild yak MODERN SPECIES 982 ISX (ENSBMUG00000014014) HMGXB4 (ENSBMUG00000014037) TOM1 (ENSBMUG00000014126) HMOX1 (ENSBMUG00000014160) MCM5 (ENSBMUG00000014209) ##22 RASD2 (ENSBMUG00000014244) MB (ENSBMUG00000014278) ENSBMUG00000014297 RBFOX2 (ENSBMUG00000014502) ENSBMUG00000014598 Domestic yak MODERN SPECIES 24 ENSBGRG00000013797 BPIFC (ENSBGRG00000013532) ENSBGRG00000013450 FBXO7 (ENSBGRG00000013412) TIMP3 (ENSBGRG00000013366) SYN3 (ENSBGRG00000013205) ENSBGRG00000013168 ENSBGRG00000013155 ENSBGRG00000013111 ENSBGRG00000013087 LARGE1 (ENSBGRG00000012772) ISX (ENSBGRG00000012688) HMGXB4 (ENSBGRG00000012577) TOM1 (ENSBGRG00000012124) HMOX1 (ENSBGRG00000011979) MCM5 (ENSBGRG00000011694) ##22 RASD2 (ENSBGRG00000011617) ENSBGRG00000011406 ENSBGRG00000011275 RBFOX2 (ENSBGRG00000009634) ENSBGRG00000009535 ENSBGRG00000009484 ENSBGRG00000009469 ENSBGRG00000009459 ENSBGRG00000009417 ENSBGRG00000009391 ENSBGRG00000009360 ENSBGRG00000009316 ENSBGRG00000009289 MYH9 (ENSBGRG00000008691) ENSBGRG00000008620 Bos_b ANCESTRAL SPECIES 22 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415.l ENSGT00940000159601 ENSGT00940000155415.k ENSGT00900000141239.A ENSGT00900000141239.B ENSGT00900000141239.C ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.b.b ENSGT01030000234599.a.a.b.a.b.a.a.b.b.a ENSGT01030000234599.a.a.b.a.b.a.a.b.a.a.b.a ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.b ENSGT01030000234599.a.a.b.a.b.a.a.b.a.b.a.a.a ENSGT01030000234599.a.a.b.a.a.c.b.e.a ENSGT01030000234599.a.a.b.a.a.c.b.e.b ENSGT01030000234599.a.a.b.a.a.c.b.f ENSGT01030000234599.a.a.b.a.a.c.a ENSGT00940000155632 Cow MODERN SPECIES 24 RTCB (ENSBTAG00000011070) BPIFC (ENSBTAG00000011071) FBXO7 (ENSBTAG00000020634) SYN3 (ENSBTAG00000020636) TIMP3 (ENSBTAG00000020638) ENSBTAG00000050644 ENSBTAG00000030683 MGC137211 (ENSBTAG00000018556) MGC137014 (ENSBTAG00000026666) LARGE1 (ENSBTAG00000021953) ENSBTAG00000053499 ISX (ENSBTAG00000007674) HMGXB4 (ENSBTAG00000010533) TOM1 (ENSBTAG00000045785) HMOX1 (ENSBTAG00000015582) MCM5 (ENSBTAG00000015595) ##22 RASD2 (ENSBTAG00000017116) MB (ENSBTAG00000005333) ENSBTAG00000049066 RBFOX2 (ENSBTAG00000020125) ENSBTAG00000046392 ENSBTAG00000049297 ENSBTAG00000037799 ENSBTAG00000052884 ENSBTAG00000055135 ENSBTAG00000048740 ENSBTAG00000050417 ENSBTAG00000039524 ENSBTAG00000038652 APOL3 (ENSBTAG00000040244) ENSBTAG00000012192 Hybrid Bos Indicus MODERN SPECIES 24 FBXO7 (ENSBIXG00005006478) TIMP3 (ENSBIXG00005004074) SYN3 (ENSBIXG00005023898) ENSBIXG00005023962 ENSBIXG00005023983 ENSBIXG00005023998 ENSBIXG00005024027 ENSBIXG00005024033 ENSBIXG00005024053 LARGE1 (ENSBIXG00005024249) ENSBIXG00005024305 ISX (ENSBIXG00005024435) HMGXB4 (ENSBIXG00005024480) TOM1 (ENSBIXG00005004200) HMOX1 (ENSBIXG00005007395) MCM5 (ENSBIXG00005024670) ##22 RASD2 (ENSBIXG00005024697) MB (ENSBIXG00005024789) ENSBIXG00005024822 ENSBIXG00005024824 RBFOX2 (ENSBIXG00005006065) ENSBIXG00005025198 ENSBIXG00005025212 ENSBIXG00005025281 ENSBIXG00005004311 ENSBIXG00005004322 ENSBIXG00005025434 ENSBIXG00005025443 ENSBIXG00005025455 ENSBIXG00005025464 MYH9 (ENSBIXG00005025536) American bison MODERN SPECIES 3317 ISX (ENSBBBG00000000566) HMGXB4 (ENSBBBG00000000577) TOM1 (ENSBBBG00000000595) HMOX1 (ENSBBBG00000020413) MCM5 (ENSBBBG00000005514) ##22 RASD2 (ENSBBBG00000020344) MB (ENSBBBG00000009080) ENSBBBG00000020324 RBFOX2 (ENSBBBG00000020313) ENSBBBG00000020238 Siberian musk deer MODERN SPECIES 1253 ISX (ENSMMSG00000018989) HMGXB4 (ENSMMSG00000018941) TOM1 (ENSMMSG00000018421) HMOX1 (ENSMMSG00000018365) MCM5 (ENSMMSG00000018304) ##22 RASD2 (ENSMMSG00000018282) MB (ENSMMSG00000018253) ENSMMSG00000018237 RBFOX2 (ENSMMSG00000018051) ENSMMSG00000018008 ENSMMSG00000017992 ENSMMSG00000017976 ENSMMSG00000017929 ENSMMSG00000017907 ENSMMSG00000017892 ENSMMSG00000017857 ENSMMSG00000017815 ENSMMSG00000017782 ENSMMSG00000017754 ENSMMSG00000017726 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 889 ENSCHYG00000020929 ##22 Yarkand deer MODERN SPECIES 508 ENSCHYG00000021483 ##22 Yarkand deer MODERN SPECIES 14 PRDM4 (ENSCHYG00000007740) ASCL4 (ENSCHYG00000007797) RTCB (ENSCHYG00000007811) BPIFC (ENSCHYG00000007868) FBXO7 (ENSCHYG00000007992) SYN3 (ENSCHYG00000008048) TIMP3 (ENSCHYG00000008114) ENSCHYG00000008148 ENSCHYG00000008163 LARGE1 (ENSCHYG00000008199) ISX (ENSCHYG00000008367) HMGXB4 (ENSCHYG00000008451) TOM1 (ENSCHYG00000008618) ENSCHYG00000009666 HMOX1 (ENSCHYG00000009724) MCM5 (ENSCHYG00000009806) ##22 RASD2 (ENSCHYG00000010005) ENSCHYG00000010043 ENSCHYG00000010123 RBFOX2 (ENSCHYG00000010239) ENSCHYG00000010868 ENSCHYG00000010899 ENSCHYG00000010957 MYH9 (ENSCHYG00000011032) ENSCHYG00000011538 TXN2 (ENSCHYG00000011563) FOXRED2 (ENSCHYG00000011581) EIF3D (ENSCHYG00000011695) CACNG2 (ENSCHYG00000011813) ENSCHYG00000011864 PVALB (ENSCHYG00000011972) Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Carnivora ANCESTRAL SPECIES 3 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Caniformia ANCESTRAL SPECIES 20 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Canidae ANCESTRAL SPECIES 10 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b.d ENSGT01030000234599.a.a.b.b.c ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911.s ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b.d ENSGT01030000234599.a.a.b.b.c ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 Dingo MODERN SPECIES 307 PRDM4 (ENSCAFG00020004916) ASCL4 (ENSCAFG00020004911) ENSCAFG00020004890 BPIFC (ENSCAFG00020004848) FBXO7 (ENSCAFG00020004763) ENSCAFG00020004756 TIMP3 (ENSCAFG00020004747) ENSCAFG00020004742 ENSCAFG00020004732 LARGE1 (ENSCAFG00020004723) ENSCAFG00020004691 ISX (ENSCAFG00020004651) HMGXB4 (ENSCAFG00020004587) TOM1 (ENSCAFG00020004581) HMOX1 (ENSCAFG00020004569) MCM5 (ENSCAFG00020004568) ##22 RASD2 (ENSCAFG00020004566) MB (ENSCAFG00020004565) ENSCAFG00020004556 ENSCAFG00020004553 ENSCAFG00020004550 RBFOX2 (ENSCAFG00020004541) ENSCAFG00020004537 ENSCAFG00020004527 MYH9 (ENSCAFG00020004512) TXN2 (ENSCAFG00020004498) ENSCAFG00020004493 EIF3D (ENSCAFG00020004483) CACNG2 (ENSCAFG00020004469) IFT27 (ENSCAFG00020004448) PVALB (ENSCAFG00020004436) Dog MODERN SPECIES 1 BTBD11 (ENSCAFG00845011667) PWP1 (ENSCAFG00845011494) PRDM4 (ENSCAFG00845011355) ENSCAFG00845011320 ENSCAFG00845011277 BPIFC (ENSCAFG00845011126) FBXO7 (ENSCAFG00845011055) TIMP3 (ENSCAFG00845010998) SYN3 (ENSCAFG00845010890) LARGE1 (ENSCAFG00845010461) ENSCAFG00845010338 ISX (ENSCAFG00845010299) HMGXB4 (ENSCAFG00845010222) TOM1 (ENSCAFG00845009904) HMOX1 (ENSCAFG00845009778) MCM5 (ENSCAFG00845009614) ##22 RASD2 (ENSCAFG00845009572) MB (ENSCAFG00845009496) ENSCAFG00845009446 ENSCAFG00845009406 RBFOX2 (ENSCAFG00845009056) ENSCAFG00845008988 ENSCAFG00845008965 MYH9 (ENSCAFG00845008811) FOXRED2 (ENSCAFG00845008671) EIF3D (ENSCAFG00845008496) CACNG2 (ENSCAFG00845008427) IFT27 (ENSCAFG00845008277) IFT27 (ENSCAFG00845008220) NCF4 (ENSCAFG00845008166) CSF2RB (ENSCAFG00845008045) Red fox MODERN SPECIES 84 PWP1 (ENSVVUG00000023390) PRDM4 (ENSVVUG00000023397) ENSVVUG00000023398 RTCB (ENSVVUG00000023408) BPIFC (ENSVVUG00000023482) FBXO7 (ENSVVUG00000023488) ENSVVUG00000023491 TIMP3 (ENSVVUG00000023494) ENSVVUG00000023500 ENSVVUG00000023507 LARGE1 (ENSVVUG00000023512) ISX (ENSVVUG00000023529) HMGXB4 (ENSVVUG00000023533) TOM1 (ENSVVUG00000023536) HMOX1 (ENSVVUG00000023539) MCM5 (ENSVVUG00000023540) ##22 RASD2 (ENSVVUG00000023551) ENSVVUG00000023554 ENSVVUG00000023556 APOL5 (ENSVVUG00000023558) RBFOX2 (ENSVVUG00000023561) ENSVVUG00000023564 ENSVVUG00000023565 ENSVVUG00000023566 MYH9 (ENSVVUG00000023567) ENSVVUG00000023574 FOXRED2 (ENSVVUG00000023575) EIF3D (ENSVVUG00000023578) CACNG2 (ENSVVUG00000023593) IFT27 (ENSVVUG00000023596) PVALB (ENSVVUG00000023604) Caniformia_b ANCESTRAL SPECIES 18 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653.b ENSGT00510000048561 Ursidae ANCESTRAL SPECIES 13 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911.v ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601.b ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a ENSGT01030000234599.a.a.b.b.a.b.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653.b ENSGT00510000048561 Ursus ANCESTRAL SPECIES 29 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911.v ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601.b ENSGT00940000158497 ENSGT00940000161702 ENSGT01030000234881 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.a.b.a ENSGT01030000234599.a.a.b.b.a.b.a.a ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653.b ENSGT00510000048561 American black bear MODERN SPECIES 415 ISX (ENSUAMG00000015512) ENSUAMG00000015508 HMGXB4 (ENSUAMG00000015503) TOM1 (ENSUAMG00000015499) HMOX1 (ENSUAMG00000015497) MCM5 (ENSUAMG00000015490) ##22 RASD2 (ENSUAMG00000015486) Polar bear MODERN SPECIES 280 CRY1 (ENSUMAG00000017250) ABTB3 (ENSUMAG00000017243) PWP1 (ENSUMAG00000017237) PRDM4 (ENSUMAG00000017231) RTCB (ENSUMAG00000017225) BPIFC (ENSUMAG00000017216) FBXO7 (ENSUMAG00000017189) ENSUMAG00000017180 TIMP3 (ENSUMAG00000017174) ENSUMAG00000017170 LARGE1 (ENSUMAG00000017061) ISX (ENSUMAG00000017029) HMGXB4 (ENSUMAG00000017004) TOM1 (ENSUMAG00000016992) HMOX1 (ENSUMAG00000016982) MCM5 (ENSUMAG00000016836) ##22 RASD2 (ENSUMAG00000016806) MB (ENSUMAG00000016802) ENSUMAG00000016798 ENSUMAG00000016795 RBFOX2 (ENSUMAG00000016785) ENSUMAG00000016777 ENSUMAG00000016774 ENSUMAG00000016771 ENSUMAG00000016767 MYH9 (ENSUMAG00000015986) TXN2 (ENSUMAG00000015844) FOXRED2 (ENSUMAG00000015837) EIF3D (ENSUMAG00000015827) CACNG2 (ENSUMAG00000015813) IFT27 (ENSUMAG00000015805) Giant Panda MODERN SPECIES 6 ENSAMEG00000016220 PWP1 (ENSAMEG00000016191) PRDM4 (ENSAMEG00000016174) ENSAMEG00000030999 ENSAMEG00000016152 ENSAMEG00000016146 FBXO7 (ENSAMEG00000016139) SYN3 (ENSAMEG00000016137) TIMP3 (ENSAMEG00000016132) LARGE1 (ENSAMEG00000016112) ISX (ENSAMEG00000001571) ENSAMEG00000026658 HMGXB4 (ENSAMEG00000001545) ENSAMEG00000026704 HMOX1 (ENSAMEG00000001468) MCM5 (ENSAMEG00000001421) ##22 RASD2 (ENSAMEG00000025567) MB (ENSAMEG00000001404) ENSAMEG00000019977 RBFOX2 (ENSAMEG00000007228) ENSAMEG00000014471 MYH9 (ENSAMEG00000009262) TXN2 (ENSAMEG00000009615) FOXRED2 (ENSAMEG00000009630) EIF3D (ENSAMEG00000009639) CACNG2 (ENSAMEG00000009683) ENSAMEG00000009688 NCF4 (ENSAMEG00000009723) PVALB (ENSAMEG00000009708) CSF2RB (ENSAMEG00000009759) ENSAMEG00000009822 Mustelinae ANCESTRAL SPECIES 4 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT01030000234599.a.a.b.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653.b ENSGT00510000048561 ENSGT00510000048963 American mink MODERN SPECIES 105 ISX (ENSNVIG00000004220) HMGXB4 (ENSNVIG00000004205) TOM1 (ENSNVIG00000003983) HMOX1 (ENSNVIG00000003962) MCM5 (ENSNVIG00000003896) ##22 RASD2 (ENSNVIG00000003891) Mb (ENSNVIG00000003864) ENSNVIG00000003855 RBFOX2 (ENSNVIG00000003703) ENSNVIG00000003682 ENSNVIG00000003674 MYH9 (ENSNVIG00000003606) THIOM (ENSNVIG00000003575) FOXRED2 (ENSNVIG00000003567) EIF3D (ENSNVIG00000003480) CACNG2 (ENSNVIG00000003468) IFT27 (ENSNVIG00000003438) PRVA (ENSNVIG00000003425) NCF4 (ENSNVIG00000003400) CSF2RB (ENSNVIG00000003298) Ferret MODERN SPECIES 171 PWP1 (ENSMPUG00000012233) PRDM4 (ENSMPUG00000012238) ENSMPUG00000012282 RTCB (ENSMPUG00000012285) BPIFC (ENSMPUG00000012338) FBXO7 (ENSMPUG00000012375) ENSMPUG00000012380 ENSMPUG00000012382 TIMP3 (ENSMPUG00000012384) LARGE1 (ENSMPUG00000012387) ENSMPUG00000012395 ENSMPUG00000012400 HMGXB4 (ENSMPUG00000012403) TOM1 (ENSMPUG00000012413) HMOX1 (ENSMPUG00000012420) MCM5 (ENSMPUG00000012460) ##22 ENSMPUG00000012523 ENSMPUG00000012525 RASD2 (ENSMPUG00000012528) MB (ENSMPUG00000012531) ENSMPUG00000012545 ENSMPUG00000012549 RBFOX2 (ENSMPUG00000012555) ENSMPUG00000012561 MYH9 (ENSMPUG00000012564) TXN2 (ENSMPUG00000012572) FOXRED2 (ENSMPUG00000012578) EIF3D (ENSMPUG00000012581) CACNG2 (ENSMPUG00000012612) IFT27 (ENSMPUG00000012614) NCF4 (ENSMPUG00000012617) Felidae ANCESTRAL SPECIES 2 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Panthera ANCESTRAL SPECIES ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01050000245108 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.p ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 leopard MODERN SPECIES 13 CRY1 (ENSPPRG00000008263) ABTB3 (ENSPPRG00000007934) PWP1 (ENSPPRG00000004997) PRDM4 (ENSPPRG00000004144) ASCL4 (ENSPPRG00000014891) RTCB (ENSPPRG00000004038) BPIFC (ENSPPRG00000003756) FBXO7 (ENSPPRG00000002329) SYN3 (ENSPPRG00000001531) TIMP3 (ENSPPRG00000000916) LARGE1 (ENSPPRG00000000649) ISX (ENSPPRG00000022857) HMGXB4 (ENSPPRG00000023113) TOM1 (ENSPPRG00000023413) HMOX1 (ENSPPRG00000024423) MCM5 (ENSPPRG00000024566) ##22 RASD2 (ENSPPRG00000019383) MB (ENSPPRG00000018608) ENSPPRG00000018171 ENSPPRG00000017930 RBFOX2 (ENSPPRG00000015635) MYH9 (ENSPPRG00000010749) ENSPPRG00000014647 TXN2 (ENSPPRG00000008247) FOXRED2 (ENSPPRG00000008189) EIF3D (ENSPPRG00000007244) CACNG2 (ENSPPRG00000007042) IFT27 (ENSPPRG00000006980) PVALB (ENSPPRG00000006755) NCF4 (ENSPPRG00000006614) CSF2RB (ENSPPRG00000006282) lion MODERN SPECIES 7 CRY1 (ENSPLOG00000022173) ABTB3 (ENSPLOG00000022210) PWP1 (ENSPLOG00000022255) PRDM4 (ENSPLOG00000022270) ASCL4 (ENSPLOG00000022281) RTCB (ENSPLOG00000022290) BPIFC (ENSPLOG00000001857) FBXO7 (ENSPLOG00000001927) SYN3 (ENSPLOG00000002067) TIMP3 (ENSPLOG00000002121) LARGE1 (ENSPLOG00000002156) ISX (ENSPLOG00000002230) HMGXB4 (ENSPLOG00000002252) TOM1 (ENSPLOG00000002363) HMOX1 (ENSPLOG00000002442) MCM5 (ENSPLOG00000002476) ##22 RASD2 (ENSPLOG00000002506) MB (ENSPLOG00000002526) ENSPLOG00000002546 RBFOX2 (ENSPLOG00000002601) ENSPLOG00000002774 MYH9 (ENSPLOG00000002812) TXN2 (ENSPLOG00000002859) FOXRED2 (ENSPLOG00000002883) EIF3D (ENSPLOG00000002913) CACNG2 (ENSPLOG00000002951) IFT27 (ENSPLOG00000002969) PVALB (ENSPLOG00000002999) NCF4 (ENSPLOG00000003026) CSF2RB (ENSPLOG00000003061) TEX33 (ENSPLOG00000003089) Tiger MODERN SPECIES 533 MTERF2 (ENSPTIG00000001843) CRY1 (ENSPTIG00000016412) ABTB3 (ENSPTIG00000007950) PWP1 (ENSPTIG00000006827) PRDM4 (ENSPTIG00000005847) RTCB (ENSPTIG00000020499) BPIFC (ENSPTIG00000016396) FBXO7 (ENSPTIG00000014668) TIMP3 (ENSPTIG00000014169) SYN3 (ENSPTIG00000012327) LARGE1 (ENSPTIG00000006861) ISX (ENSPTIG00000005608) HMGXB4 (ENSPTIG00000004430) TOM1 (ENSPTIG00000021409) HMOX1 (ENSPTIG00000020337) MCM5 (ENSPTIG00000017342) ##22 RASD2 (ENSPTIG00000016963) MB (ENSPTIG00000014883) ENSPTIG00000014118 RBFOX2 (ENSPTIG00000019147) ENSPTIG00000017958 ENSPTIG00000017495 TXN2 (ENSPTIG00000016368) FOXRED2 (ENSPTIG00000014048) EIF3D (ENSPTIG00000012272) CACNG2 (ENSPTIG00000012034) IFT27 (ENSPTIG00000010463) PVALB (ENSPTIG00000009503) NCF4 (ENSPTIG00000006947) CSF2RB (ENSPTIG00000001853) TEX33 (ENSPTIG00000021907) Cat MODERN SPECIES 238 CRY1 (ENSFCAG00000028263) BTBD11 (ENSFCAG00000010776) PWP1 (ENSFCAG00000031370) PRDM4 (ENSFCAG00000022478) ASCL4 (ENSFCAG00000044499) RTCB (ENSFCAG00000026480) BPIFC (ENSFCAG00000009799) FBXO7 (ENSFCAG00000009802) SYN3 (ENSFCAG00000009804) TIMP3 (ENSFCAG00000034191) LARGE1 (ENSFCAG00000015793) ISX (ENSFCAG00000013025) HMGXB4 (ENSFCAG00000003298) TOM1 (ENSFCAG00000003299) HMOX1 (ENSFCAG00000040191) MCM5 (ENSFCAG00000013844) ##22 RASD2 (ENSFCAG00000042800) MB (ENSFCAG00000045716) ENSFCAG00000041482 RBFOX2 (ENSFCAG00000010061) ENSFCAG00000047081 MYH9 (ENSFCAG00000001124) TXN2 (ENSFCAG00000001127) FOXRED2 (ENSFCAG00000001128) EIF3D (ENSFCAG00000001131) CACNG2 (ENSFCAG00000025886) IFT27 (ENSFCAG00000011068) PVALB (ENSFCAG00000018217) NCF4 (ENSFCAG00000019315) CSF2RB (ENSFCAG00000025665) TST (ENSFCAG00000001069) Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.o.a ENSGT00530000064086.p.b ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Equus ANCESTRAL SPECIES 21 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01100000266377 ENSGT00940000157534 ENSGT01030000234599.a.a.b.b.e.a ENSGT01030000234599.a.a.b.b.e.b ENSGT00940000155632 ENSGT00530000064086.p.b ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Donkey MODERN SPECIES 11 CRY1 (ENSEASG00005019194) ABTB3 (ENSEASG00005019112) PWP1 (ENSEASG00005019071) PRDM4 (ENSEASG00005019067) ENSEASG00005019063 ENSEASG00005019059 BPIFC (ENSEASG00005019055) FBXO7 (ENSEASG00005019009) ENSEASG00005019000 TIMP3 (ENSEASG00005018998) LARGE1 (ENSEASG00005018985) ENSEASG00005018970 HMGXB4 (ENSEASG00005018962) TOM1 (ENSEASG00005018954) HMOX1 (ENSEASG00005034422) MCM5 (ENSEASG00005018944) ##22 ENSEASG00005018937 MB (ENSEASG00005018936) ENSEASG00005018934 ENSEASG00005018933 RBFOX2 (ENSEASG00005018920) ENSEASG00005035886 ENSEASG00005026628 ENSEASG00005035003 MYH9 (ENSEASG00005018911) ENSEASG00005026288 FOXRED2 (ENSEASG00005018907) EIF3D (ENSEASG00005018906) CACNG2 (ENSEASG00005032500) ENSEASG00005018903 PVALB (ENSEASG00005018901) Horse MODERN SPECIES 20 ENSECAG00000058028 BTBD11 (ENSECAG00000009835) PWP1 (ENSECAG00000022620) PRDM4 (ENSECAG00000015423) ASCL4 (ENSECAG00000026928) RTCB (ENSECAG00000023998) BPIFC (ENSECAG00000024388) FBXO7 (ENSECAG00000009510) SYN3 (ENSECAG00000019504) TIMP3 (ENSECAG00000018314) LARGE1 (ENSECAG00000020560) ISX (ENSECAG00000023597) HMGXB4 (ENSECAG00000023930) TOM1 (ENSECAG00000011873) HMOX1 (ENSECAG00000001129) MCM5 (ENSECAG00000014368) ##22 RASD2 (ENSECAG00000038427) MB (ENSECAG00000017982) APOL6 (ENSECAG00000018752) ENSECAG00000051859 RBFOX2 (ENSECAG00000018923) ENSECAG00000032835 ENSECAG00000059078 MYH9 (ENSECAG00000020716) TXN2 (ENSECAG00000013929) FOXRED2 (ENSECAG00000016811) EIF3D (ENSECAG00000022413) CACNG2 (ENSECAG00000017828) IFT27 (ENSECAG00000020212) NCF4 (ENSECAG00000008957) ENSECAG00000019875 Chiroptera ANCESTRAL SPECIES 23 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT01030000234599.a.a.a.b ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.o.a ENSGT00530000064086.p.b ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 Megabat MODERN SPECIES 2436 ISX (ENSPVAG00000011410) HMGXB4 (ENSPVAG00000011411) TOM1 (ENSPVAG00000011413) HMOX1 (ENSPVAG00000011414) MCM5 (ENSPVAG00000011415) ##22 Microchiroptera ANCESTRAL SPECIES 8 ENSGT00940000155455 ENSGT00940000156419 ENSGT00390000017324 ENSGT00940000156443 ENSGT00940000162902 ENSGT00940000155911 ENSGT01100000263545.a.b.c.a ENSGT00390000006670 ENSGT00940000155415 ENSGT00940000159601 ENSGT00940000158497 ENSGT00940000161702 ENSGT00390000012436 ENSGT00940000156865 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b.b ENSGT00940000155632 ENSGT00530000064086.o.a ENSGT00530000064086.p.a ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 Greater horseshoe bat MODERN SPECIES 1 ABTB3 (ENSRFEG00010008001) PWP1 (ENSRFEG00010007865) ENSRFEG00010007833 PRDM4 (ENSRFEG00010007783) ASCL4 (ENSRFEG00010007756) BT_m004_jsmF9A7Cr (ENSRFEG00010007717) BPIFC (ENSRFEG00010007450) FBXO7 (ENSRFEG00010007248) TIMP3 (ENSRFEG00010007197) SYN3 (ENSRFEG00010007094) LARGE1 (ENSRFEG00010006902) ISX (ENSRFEG00010006799) HMGXB4 (ENSRFEG00010006753) TOM1 (ENSRFEG00010006608) HMOX1 (ENSRFEG00010006539) MCM5 (ENSRFEG00010006455) ##22 RASD2 (ENSRFEG00010006415) MB (ENSRFEG00010004450) ENSRFEG00010004432 RBFOX2 (ENSRFEG00010004338) ENSRFEG00010004269 ENSRFEG00010004255 MYH9 (ENSRFEG00010004208) ENSRFEG00010004167 FOXRED2 (ENSRFEG00010004138) EIF3D (ENSRFEG00010004102) CACNG2 (ENSRFEG00010004070) IFT27 (ENSRFEG00010004047) PVALB (ENSRFEG00010004028) NCF4 (ENSRFEG00010004012) ENSRFEG00010003998 Microbat MODERN SPECIES 1040 CRY1 (ENSMLUG00000016284) ABTB3 (ENSMLUG00000000748) PWP1 (ENSMLUG00000000756) PRDM4 (ENSMLUG00000000767) ASCL4 (ENSMLUG00000023526) RTCB (ENSMLUG00000007803) BPIFC (ENSMLUG00000008017) FBXO7 (ENSMLUG00000008033) SYN3 (ENSMLUG00000008065) TIMP3 (ENSMLUG00000027724) LARGE1 (ENSMLUG00000003416) ISX (ENSMLUG00000006944) HMGXB4 (ENSMLUG00000001977) ENSMLUG00000026010 HMOX1 (ENSMLUG00000008815) MCM5 (ENSMLUG00000001987) ##22 RASD2 (ENSMLUG00000013318) MB (ENSMLUG00000013313) ENSMLUG00000014967 RBFOX2 (ENSMLUG00000002676) ENSMLUG00000026695 ENSMLUG00000030616 Atlantogenata ANCESTRAL SPECIES 36 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Xenarthra ANCESTRAL SPECIES 132 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT01050000244893.c.a.b ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 Armadillo MODERN SPECIES 1369 HMOX1 (ENSDNOG00000034860) MCM5 (ENSDNOG00000009637) ##22 RASD2 (ENSDNOG00000037424) ENSDNOG00000035987 MB (ENSDNOG00000014122) ENSDNOG00000004364 RBFOX2 (ENSDNOG00000004372) ENSDNOG00000015862 MYH9 (ENSDNOG00000016566) TXN2 (ENSDNOG00000025605) FOXRED2 (ENSDNOG00000018476) EIF3D (ENSDNOG00000018482) CACNG2 (ENSDNOG00000034297) IFT27 (ENSDNOG00000044425) PVALB (ENSDNOG00000043436) NCF4 (ENSDNOG00000004194) CSF2RB (ENSDNOG00000011313) Afrotheria ANCESTRAL SPECIES 33 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Tenrec MODERN SPECIES 339 HMOX1 (ENSETEG00000015092) MCM5 (ENSETEG00000015093) ##22 Afrotheria_a ANCESTRAL SPECIES 33 ENSGT00390000017673.b ENSGT01050000244824.G ##22 ENSGT00940000161129 ENSGT00940000160809 ENSGT01030000234599.a.a.a.a ENSGT00940000157534 ENSGT01030000234599.a.a.b ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000002667 ENSGT00870000136549 ENSGT00940000159653 ENSGT00510000048561 ENSGT00510000048963 ENSGT00390000013198 ENSGT00510000046773.a.b Elephant MODERN SPECIES 544 HMOX1 (ENSLAFG00000027909) MCM5 (ENSLAFG00000008227) ##22 RASD2 (ENSLAFG00000018259) MB (ENSLAFG00000023176) ENSLAFG00000021451 RBFOX2 (ENSLAFG00000027140) ENSLAFG00000004411 ENSLAFG00000018226 MYH9 (ENSLAFG00000005893) ENSLAFG00000004426 TXN2 (ENSLAFG00000023368) FOXRED2 (ENSLAFG00000001712) EIF3D (ENSLAFG00000001714) IFT27 (ENSLAFG00000005368) PVALB (ENSLAFG00000025993) NCF4 (ENSLAFG00000008912) ENSLAFG00000006108 Hyrax MODERN SPECIES 208 HMOX1 (ENSPCAG00000016672) MCM5 (ENSPCAG00000016704) ##22 Actinopterygii ANCESTRAL SPECIES 402 ENSGT00940000155858 ENSGT00390000000159 ENSGT00950000183099 ENSGT00550000075117 ENSGT00940000155632 ENSGT00530000064086 ENSGT00640000091519 ENSGT00390000017673.b ENSGT01050000244824.G ##22 Neopterygii ANCESTRAL SPECIES 918 ENSGT00940000172325 ENSGT01050000244824.G ##22 Osteoglossocephalai ANCESTRAL SPECIES 86 ENSGT00530000063718.a.b ENSGT00940000163377.a.a ENSGT00410000026495.B ENSGT00940000157896 ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a.a.b ENSGT00940000155083.a ENSGT00940000157534.a.b ENSGT00950000182961.a.b.b ENSGT00390000013260.A.b ENSGT00390000003753 ENSGT00710000107036.a.a ENSGT00940000155774.b ENSGT00910000147001 ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343 ENSGT00940000166140 ENSGT00940000157140.b.b.b ENSGT00470000042444 ENSGT00940000161143 ENSGT00940000159543 ENSGT00940000165948 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b ENSGT00940000157700 Clupeocephala ANCESTRAL SPECIES 5 ENSGT00390000013260.A.b.a ENSGT00390000003753 ENSGT00710000107036.a.a ENSGT00940000162350.b.b ENSGT00940000162350.b.a ENSGT01010000222553 ENSGT00940000155774.b ENSGT00910000147001 ENSGT00940000155729 ENSGT00940000172325 ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT01030000234881 ENSGT00390000012436.h ENSGT00940000165343.c.a ENSGT00940000166140 ENSGT00940000157140.b.b.b ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.i ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 Otomorpha ANCESTRAL SPECIES 4 ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a ENSGT00440000038745.a.a.a ENSGT00940000178527 ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.a ENSGT01050000244887.A.a.a.a.j Otophysi ANCESTRAL SPECIES 8 ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a ENSGT00940000178527 ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156964.B Characiphysae ANCESTRAL SPECIES 33 ENSGT00940000165096.b.a ENSGT00950000183213.a.b ENSGT00940000164726.a ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156964.B Channel catfish MODERN SPECIES 11 CHMP6 (ENSIPUG00000003939) ttyh2l (ENSIPUG00000003948) SDK2 (ENSIPUG00000003983) pmp22a (ENSIPUG00000004104) Hs3st3b1 (ENSIPUG00000004111) ARHGAP44 (ENSIPUG00000004140) ENSIPUG00000004251 ndel1b (ENSIPUG00000004269) ACSF2 (ENSIPUG00000004283) SLC16A5 (ENSIPUG00000004300) atp5pd (ENSIPUG00000004307) sbk1 (ENSIPUG00000004379) luc7l3 (ENSIPUG00000004396) radil2a (ENSIPUG00000004427) GCAT (ENSIPUG00000004446) mcm5 (ENSIPUG00000004465) ##22 hmox1 (ENSIPUG00000004527) foxred2 (ENSIPUG00000004540) ankrd54 (ENSIPUG00000004592) HMGXB4 (ENSIPUG00000004613) si:dkeyp-69e1.8 (ENSIPUG00000004642) foxd7 (ENSIPUG00000004646) s1pr5a (ENSIPUG00000004663) spc24 (ENSIPUG00000004670) tob1a (ENSIPUG00000004705) spag9a (ENSIPUG00000004752) tmem159 (ENSIPUG00000004969) kdelr2a (ENSIPUG00000004993) ENSIPUG00000005045 ndufb10 (ENSIPUG00000005055) ENSIPUG00000005160 Characiphysae_b ANCESTRAL SPECIES 24 ENSGT00940000165096.b.a ENSGT00950000183213.a.b ENSGT00940000164726.a ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156964.B Characoidei ANCESTRAL SPECIES 97 ENSGT00940000154244.A.a.a ENSGT00940000153560.b.a.a.n.a ENSGT00720000108863.l.b ENSGT00950000183060.a.b.a.a ENSGT00940000155761.d ENSGT00940000161435.a.b ENSGT00950000182696.B.a.a.b ENSGT00940000166888 ENSGT00940000157296.o.b ENSGT00390000002856 ENSGT00390000000111.a.m ENSGT00940000165096.b.a ENSGT00950000183213.a.b ENSGT00940000164726.a ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.a ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156964.B Mexicana tetra MODERN SPECIES 11 ttyh2l (ENSAMXG00000041284) SDK2 (ENSAMXG00000020964) cdc42ep4a (ENSAMXG00000020983) pmp22a (ENSAMXG00000032981) hs3st3b1a (ENSAMXG00000035430) ARHGAP44 (ENSAMXG00000020790) ENSAMXG00000035546 ndel1b (ENSAMXG00000032705) SLC16A5 (ENSAMXG00000037665) atp5pd (ENSAMXG00000038134) ENSAMXG00000032828 luc7l3 (ENSAMXG00000020856) radil2a (ENSAMXG00000020871) ENSAMXG00000032039 gcat (ENSAMXG00000020893) mcm5 (ENSAMXG00000034157) ##22 hmox1a (ENSAMXG00000042453) foxred2 (ENSAMXG00000020917) ankrd54 (ENSAMXG00000020927) hmgxb4a (ENSAMXG00000030681) ENSAMXG00000031937 si:dkeyp-69e1.8 (ENSAMXG00000029085) ENSAMXG00000038286 s1pr5a (ENSAMXG00000025307) spc24 (ENSAMXG00000041119) kri1 (ENSAMXG00000031825) ldlra (ENSAMXG00000034717) smarca4a (ENSAMXG00000021023) ENSAMXG00000042598 rln3a (ENSAMXG00000034611) rfx1a (ENSAMXG00000021077) Red-bellied piranha MODERN SPECIES 114 ttyh2l (ENSPNAG00000022909) ENSPNAG00000022936 SDK2 (ENSPNAG00000023248) cdc42ep4a (ENSPNAG00000023273) pmp22a (ENSPNAG00000005555) hs3st3b1a (ENSPNAG00000023287) ARHGAP44 (ENSPNAG00000023355) ENSPNAG00000005086 ndel1b (ENSPNAG00000023401) atp5pd (ENSPNAG00000023419) SLC16A5 (ENSPNAG00000023433) ENSPNAG00000023444 luc7l3 (ENSPNAG00000023459) radil2a (ENSPNAG00000023548) gcat (ENSPNAG00000023604) mcm5 (ENSPNAG00000023704) ##22 hmox1a (ENSPNAG00000023750) foxred2 (ENSPNAG00000023787) ankrd54 (ENSPNAG00000023810) hmgxb4a (ENSPNAG00000023830) si:dkeyp-69e1.8 (ENSPNAG00000023855) ENSPNAG00000003795 s1pr5a (ENSPNAG00000023881) spc24 (ENSPNAG00000023892) kri1 (ENSPNAG00000023903) ldlra (ENSPNAG00000024016) smarca4a (ENSPNAG00000024136) ENSPNAG00000024161 rln3a (ENSPNAG00000003813) rfx1a (ENSPNAG00000024242) GRIN2C (ENSPNAG00000005556) Electric eel MODERN SPECIES 68 FAM171A2 (ENSEEEG00000009179) syngr1a (ENSEEEG00000009177) tcap (ENSEEEG00000009175) ENSEEEG00000009174 rprml (ENSEEEG00000009173) itgb3a (ENSEEEG00000008566) mettl2a (ENSEEEG00000008525) tlk2 (ENSEEEG00000008141) ENSEEEG00000008125 MRC2 (ENSEEEG00000008106) rnd2 (ENSEEEG00000008091) ENSEEEG00000008082 luc7l3 (ENSEEEG00000008078) radil2a (ENSEEEG00000008073) gcat (ENSEEEG00000008048) mcm5 (ENSEEEG00000008042) ##22 hmox1a (ENSEEEG00000008040) foxred2 (ENSEEEG00000008035) ankrd54 (ENSEEEG00000008033) hmgxb4a (ENSEEEG00000008031) si:dkeyp-69e1.8 (ENSEEEG00000008030) foxd7 (ENSEEEG00000008029) s1pr5a (ENSEEEG00000008028) spc24 (ENSEEEG00000008027) kri1 (ENSEEEG00000008024) ldlra (ENSEEEG00000008019) smarca4a (ENSEEEG00000005959) ENSEEEG00000005861 rln3a (ENSEEEG00000005857) rfx1a (ENSEEEG00000005804) GRIN2C (ENSEEEG00000005802) Cyprinoidei ANCESTRAL SPECIES 77 ENSGT00940000155563.k.a.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.c ENSGT00440000038745.a.a.a ENSGT00390000010047.g.a ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729.s.a ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156964.B Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 73 ENSGT00940000160396.c ENSGT00390000008221.b.b ENSGT00940000154705.A.a.d ENSGT00940000155563.k.a.a.a ENSGT01050000244891.E.a.b.a.a ENSGT00940000154830.c.a ENSGT00940000155738.ab.a.b ENSGT00940000154272.B.b.b ENSGT00940000158772.b.a ENSGT00940000153882.a.b.a.j.a ENSGT00530000063753.A.b.b ENSGT00530000063599.A.f ENSGT00440000038745.a.a.b.g.b ENSGT00940000156865.b.b ENSGT00940000155729.s.a ENSGT01050000244824.G.g ##22 ENSGT00390000017673.b.l.c ENSGT00640000091519.d ENSGT00940000157805.b ENSGT00390000012436.g.a ENSGT00940000165343.c.b.a.b ENSGT00940000157140.b.b.b.f ENSGT01050000244887.A.a.a.a.j.a ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a.b ENSGT00940000156887.a.b ENSGT00940000155603.B.a ENSGT00940000154396.b.a.a.a.c ENSGT01050000244879.a.b.e.f ENSGT00940000156964.B.b Goldfish MODERN SPECIES 22 dnaja3a (ENSCARG00000060780) coro7 (ENSCARG00000062576) vasnb (ENSCARG00000063027) glis2b (ENSCARG00000063041) TFAP4 (ENSCARG00000063057) srl (ENSCARG00000063117) ADCY9 (ENSCARG00000063133) ENSCARG00000063146 snrnp25 (ENSCARG00000063166) polr3k (ENSCARG00000063185) cdip1 (ENSCARG00000063212) ENSCARG00000063219 zgc:171844 (ENSCARG00000007326) tom1 (ENSCARG00000007345) gcat (ENSCARG00000007389) mcm5 (ENSCARG00000007468) ##22 hmox1a (ENSCARG00000007675) ankrd54 (ENSCARG00000007691) hmgxb4a (ENSCARG00000007705) foxd7 (ENSCARG00000007735) s1pr5a (ENSCARG00000007740) spc24 (ENSCARG00000007745) kri1 (ENSCARG00000007775) ldlra (ENSCARG00000007959) smarca4a (ENSCARG00000008929) rln3a (ENSCARG00000009010) rfx1a (ENSCARG00000009027) GRIN2C (ENSCARG00000009070) TMEM104 (ENSCARG00000009121) tnpo2a (ENSCARG00000009157) cbx4 (ENSCARG00000009243) Cyprininae_a ANCESTRAL SPECIES 93 ENSGT00510000049239.a.c.a ENSGT00940000160396.c ENSGT00390000008221.b.b ENSGT00940000154705.A.a.d ENSGT00940000155563.k.a.a.a ENSGT01050000244891.E.a.b.a.a ENSGT00940000154830.c.a ENSGT00940000155738.ab.a.b ENSGT00940000154272.B.b.b ENSGT00940000158772.b.a ENSGT00940000153882.a.b.a.j.a ENSGT00530000063753.A.b.b ENSGT00530000063599.A.f ENSGT00440000038745.a.a.b.g.b ENSGT00940000156865.b.b ENSGT01050000244824.G.g ##22 ENSGT00390000017673.b.l.c ENSGT00640000091519.d ENSGT00940000157805.b ENSGT00390000012436.g.a ENSGT00940000165343.c.b.a.b ENSGT00940000157140.b.b.b.f ENSGT00390000005584 ENSGT00390000005605.d ENSGT01050000244887.A.a.a.a.j.a ENSGT00940000154819.a.b.c.a.b ENSGT00400000024875.d.e ENSGT00940000156887.a.b ENSGT00940000155603.B.a ENSGT00940000154396.b.a.a.a.c ENSGT01050000244879.a.b.e.f Common carp reference MODERN SPECIES 3 il2rb (ENSCCRG00000004197) ENSCCRG00000069412 mgat3a (ENSCCRG00000078535) ddx5 (ENSCCRG00000073555) smurf2 (ENSCCRG00000068445) kpna2 (ENSCCRG00000010672) ENSCCRG00000010871 grb2b (ENSCCRG00000012723) ENSCCRG00000071516 ENSCCRG00000057714 ntn1b (ENSCCRG00000042266) ENSCCRG00000064846 mfsd6l (ENSCCRG00000054768) zgc:171844 (ENSCCRG00000000941) tom1 (ENSCCRG00000000946) mcm5 (ENSCCRG00000000956) ##22 gcat (ENSCCRG00000071612) ENSCCRG00000056915 hmgxb4a (ENSCCRG00000001001) ENSCCRG00000059448 foxd7 (ENSCCRG00000076821) kri1 (ENSCCRG00000057189) s1pr5a (ENSCCRG00000077475) ldlra (ENSCCRG00000005451) ENSCCRG00000005753 smarca4a (ENSCCRG00000005852) ENSCCRG00000016343 rln3a (ENSCCRG00000016377) rfx1a (ENSCCRG00000016380) ENSCCRG00000016386 ENSCCRG00000016400 Golden-line barbel MODERN SPECIES 868 ENSSGRG00000043183 ntn1b (ENSSGRG00000043193) ENSSGRG00000043199 mfsd6l (ENSSGRG00000043201) sod3a (ENSSGRG00000043203) ENSSGRG00000043207 tom1 (ENSSGRG00000043209) ENSSGRG00000043210 ENSSGRG00000043212 mcm5 (ENSSGRG00000043222) ##22 hmox1a (ENSSGRG00000043419) foxred2 (ENSSGRG00000043431) ankrd54 (ENSSGRG00000043433) hmgxb4a (ENSSGRG00000043435) si:dkeyp-69e1.8 (ENSSGRG00000043438) Cyprininae ANCESTRAL SPECIES 56 ENSGT00940000156584.e.b.b ENSGT01100000263525.b.a.o ENSGT00390000006679.b.w.a.a.a.a.a ENSGT00390000006679.b.w.a.a.a.a.b ENSGT00390000005602 ENSGT00940000155311.A.a.e ENSGT00390000006956.b.a.b ENSGT00940000160534.k ENSGT00950000183197.a.c ENSGT00940000156447.a.b.f ENSGT00940000159871.b.a.a.c.b ENSGT00950000182860.a.a.a.ub.a.e ENSGT00510000050089.b.d ENSGT01030000235499.B ENSGT00940000155729.s.b ENSGT01050000244824.G.h ##22 ENSGT00390000017673.b.l.d ENSGT00640000091519.c ENSGT00940000157805.a.a ENSGT00390000012436.g.b ENSGT00940000165343.c.b.a.a ENSGT00940000157140.b.b.b.e ENSGT01050000244887.A.a.a.a.j.b ENSGT00940000154819.a.b.c.a.a ENSGT00940000156887.a.a ENSGT00940000155603.B.b ENSGT00940000154396.b.a.a.a.d ENSGT01050000244879.a.b.e.e ENSGT00940000156964.B.a ENSGT00390000001244.c ENSGT00940000156708.b.a.b Goldfish MODERN SPECIES 20 col1a1a (ENSCARG00000023493) gngt2a (ENSCARG00000023348) ENSCARG00000023329 ENSCARG00000023300 nags (ENSCARG00000023267) lsm12a (ENSCARG00000023243) HDAC5 (ENSCARG00000022174) cyb561 (ENSCARG00000022124) TANC2 (ENSCARG00000020476) ENSCARG00000020374 ENSCARG00000020339 ifnphi1 (ENSCARG00000020317) ENSCARG00000020280 ENSCARG00000020258 GCAT (ENSCARG00000020146) mcm5 (ENSCARG00000019928) ##22 hmox1a (ENSCARG00000019905) foxred2 (ENSCARG00000019900) ankrd54 (ENSCARG00000019881) hmgxb4a (ENSCARG00000019870) si:dkeyp-69e1.8 (ENSCARG00000019866) foxd7 (ENSCARG00000019863) s1pr5a (ENSCARG00000019861) ENSCARG00000019840 spc24 (ENSCARG00000019829) ldlra (ENSCARG00000017938) smarca4a (ENSCARG00000017563) ENSCARG00000017413 rln3a (ENSCARG00000017398) rfx1a (ENSCARG00000017113) GRIN2C (ENSCARG00000017054) Cyprininae_a ANCESTRAL SPECIES 12 ENSGT00940000160144.c ENSGT00940000158833.a.a.b ENSGT00940000156584.e.b.b ENSGT01100000263525.b.a.o ENSGT00390000005602 ENSGT00940000155311.A.a.e ENSGT00390000006956.b.a.b ENSGT00940000160534.k ENSGT00950000183197.a.c ENSGT00940000156447.a.b.f ENSGT00940000159871.b.a.a.c.b ENSGT00950000182860.a.a.a.ub.a.e ENSGT00510000050089.b.d ENSGT01030000235499.B ENSGT00940000155729.s.b ENSGT01050000244824.G.h ##22 ENSGT00390000017673.b.l.d ENSGT00640000091519.c ENSGT00940000157805.a.a ENSGT01030000234881.d ENSGT00940000165343.c.b.a.a ENSGT00940000157140.b.b.b.e ENSGT01050000244887.A.a.a.a.j.b ENSGT00390000005605.c ENSGT00940000154819.a.b.c.a.a ENSGT00940000156887.a.a ENSGT00940000155603.B.b ENSGT00940000154396.b.a.a.a.d ENSGT01050000244879.a.b.e.e ENSGT00940000156964.B.a ENSGT00390000001244.c Common carp reference MODERN SPECIES 1 ENSCCRG00000062716 nags (ENSCCRG00000029365) ENSCCRG00000080249 lsm12a (ENSCCRG00000029358) ENSCCRG00000054568 cyb561 (ENSCCRG00000079781) ENSCCRG00000011171 ENSCCRG00000022651 ENSCCRG00000022661 ifnphi1 (ENSCCRG00000022671) ENSCCRG00000022659 ENSCCRG00000022684 ifnphi1 (ENSCCRG00000023842) ENSCCRG00000067475 ENSCCRG00000063496 mcm5 (ENSCCRG00000000832) ##22 hmox1a (ENSCCRG00000071293) foxred2 (ENSCCRG00000004995) ankrd54 (ENSCCRG00000005008) ENSCCRG00000064452 si:dkeyp-69e1.8 (ENSCCRG00000056356) ENSCCRG00000078920 s1pr5a (ENSCCRG00000078650) ENSCCRG00000005420 kri1 (ENSCCRG00000005433) ldlra (ENSCCRG00000040492) ENSCCRG00000071569 smarca4a (ENSCCRG00000001090) ENSCCRG00000024491 rln3a (ENSCCRG00000024488) rfx1a (ENSCCRG00000051836) Golden-line barbel MODERN SPECIES 677 ENSSGRG00000019542 mcm5 (ENSSGRG00000019544) ##22 hmox1a (ENSSGRG00000019570) foxred2 (ENSSGRG00000019573) hmgxb4a (ENSSGRG00000019583) si:dkeyp-69e1.8 (ENSSGRG00000019584) foxd7 (ENSSGRG00000019585) kri1 (ENSSGRG00000019586) ENSSGRG00000019587 ENSSGRG00000019590 smarca4a (ENSSGRG00000019601) ENSSGRG00000020702 rln3a (ENSSGRG00000020704) rfx1a (ENSSGRG00000020708) GRIN2C (ENSSGRG00000020822) ENSSGRG00000020824 TMEM104 (ENSSGRG00000020827) Zebrafish MODERN SPECIES 18 C1QTNF6 (ENSDARG00000055175) mgat3a (ENSDARG00000038069) ddx5 (ENSDARG00000038068) smurf2 (ENSDARG00000038067) kpna2 (ENSDARG00000038066) BPTF (ENSDARG00000077361) grb2b (ENSDARG00000038059) MCHR1 (ENSDARG00000022525) ENSDARG00000088072 ntn1b (ENSDARG00000022531) ENSDARG00000091140 mfsd6l (ENSDARG00000014761) zgc:171844 (ENSDARG00000067813) tom1 (ENSDARG00000104581) gcat (ENSDARG00000005643) mcm5 (ENSDARG00000019507) ##22 hmox1a (ENSDARG00000027529) foxred2 (ENSDARG00000061354) ankrd54 (ENSDARG00000055743) hmgxb4a (ENSDARG00000075783) si:dkeyp-69e1.8 (ENSDARG00000055731) atp2a1 (ENSDARG00000020574) foxd7 (ENSDARG00000079699) hsp70.1 (ENSDARG00000029688) hsp70.2 (ENSDARG00000092362) hsp70.3 (ENSDARG00000021924) rabep2 (ENSDARG00000061213) ENSDARG00000087869 ypel3 (ENSDARG00000055510) gdpd3a (ENSDARG00000074466) mapk3 (ENSDARG00000070573) Clupeiformes ANCESTRAL SPECIES 315 ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.a ENSGT00940000175590 ENSGT00940000161143.g ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00940000166251 Atlantic herring MODERN SPECIES ENSCHAG00000015225 ENSCHAG00000015250 ENSCHAG00000015283 ENSCHAG00000015290 ENSCHAG00000015301 ENSCHAG00000015308 ENSCHAG00000015315 ENSCHAG00000015341 cfap52 (ENSCHAG00000015357) ntn1b (ENSCHAG00000015494) ENSCHAG00000015548 mfsd6l (ENSCHAG00000015564) zgc:171844 (ENSCHAG00000015575) tom1 (ENSCHAG00000015586) gcat (ENSCHAG00000015618) mcm5 (ENSCHAG00000016259) ##22 hmox1a (ENSCHAG00000016675) foxred2 (ENSCHAG00000016685) ankrd54 (ENSCHAG00000016730) hmgxb4a (ENSCHAG00000016777) si:dkeyp-69e1.8 (ENSCHAG00000000076) FDX2 (ENSCHAG00000000081) s1pr5a (ENSCHAG00000000083) spc24 (ENSCHAG00000000085) ENSCHAG00000000087 uqcrc2a (ENSCHAG00000000097) stk19 (ENSCHAG00000000147) DXO (ENSCHAG00000000153) ENSCHAG00000000159 RBFOX3 (ENSCHAG00000000171) ENPP7 (ENSCHAG00000000182) Denticle herring MODERN SPECIES 17 ENSDCDG00000029178 ENSDCDG00000029181 ddx5 (ENSDCDG00000029205) smurf2 (ENSDCDG00000029867) kpna2 (ENSDCDG00000029792) BPTF (ENSDCDG00000030148) grb2b (ENSDCDG00000030178) MCHR1 (ENSDCDG00000030182) ENSDCDG00000030192 ntn1b (ENSDCDG00000030197) ENSDCDG00000030213 mfsd6l (ENSDCDG00000030218) zgc:171844 (ENSDCDG00000030220) tom1 (ENSDCDG00000030230) gcat (ENSDCDG00000030262) mcm5 (ENSDCDG00000030446) ##22 hmox1a (ENSDCDG00000030454) foxred2 (ENSDCDG00000030455) ankrd54 (ENSDCDG00000030461) hmgxb4a (ENSDCDG00000030463) si:dkeyp-69e1.8 (ENSDCDG00000030466) ENSDCDG00000030467 s1pr5a (ENSDCDG00000030468) spc24 (ENSDCDG00000030469) uqcrc2a (ENSDCDG00000030482) snu13a (ENSDCDG00000031461) ENSDCDG00000031463 anks4b (ENSDCDG00000031468) ENSDCDG00000002898 DXO (ENSDCDG00000002918) stk19 (ENSDCDG00000002936) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155004.t ENSGT00720000108861 ENSGT00940000157864.a.b ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT00940000172325 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Acanthomorphata ANCESTRAL SPECIES 25 ENSGT00910000148759 ENSGT00940000155563.l ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT00940000172325 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Euacanthomorphacea ANCESTRAL SPECIES 5 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT00940000172325 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT00940000172325 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Tiger tail seahorse MODERN SPECIES 432 ENSHCOG00000000523 ENSHCOG00000019614 gcdhb (ENSHCOG00000019597) ENSHCOG00000019563 farsa (ENSHCOG00000019548) ilf3b (ENSHCOG00000019528) ptger1b (ENSHCOG00000019485) ENSHCOG00000000519 trappc5 (ENSHCOG00000019427) MCOLN1 (ENSHCOG00000019420) ENSHCOG00000019392 ENSHCOG00000019382 pkn1b (ENSHCOG00000019370) ENSHCOG00000019332 ENSHCOG00000019328 mcm5 (ENSHCOG00000019324) ##22 foxred2 (ENSHCOG00000019279) hmox1a (ENSHCOG00000019209) ankrd54 (ENSHCOG00000019202) hmgxb4a (ENSHCOG00000019194) foxd7 (ENSHCOG00000019159) Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Ovalentaria ANCESTRAL SPECIES 1 ENSGT00940000155563.k.a ENSGT00910000148759 ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Atherinomorphae ANCESTRAL SPECIES 25 ENSGT00940000155774.b ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Aplocheiloidei ANCESTRAL SPECIES 30 ENSGT00940000155774.b ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Mangrove rivulus MODERN SPECIES 37 ddx47 (ENSKMAG00000013071) wbp11 (ENSKMAG00000013030) AANAT (ENSKMAG00000013015) ENSKMAG00000012962 ddx5 (ENSKMAG00000012930) smurf2 (ENSKMAG00000012852) kpna2 (ENSKMAG00000012796) BPTF (ENSKMAG00000012749) grb2b (ENSKMAG00000012716) ENSKMAG00000012694 ntn1b (ENSKMAG00000012664) ENSKMAG00000012627 mfsd6l (ENSKMAG00000012614) tom1 (ENSKMAG00000012555) gcat (ENSKMAG00000012497) mcm5 (ENSKMAG00000012432) ##22 hmox1a (ENSKMAG00000012409) foxred2 (ENSKMAG00000012353) ankrd54 (ENSKMAG00000012297) hmgxb4a (ENSKMAG00000012268) si:dkeyp-69e1.8 (ENSKMAG00000012252) foxd7 (ENSKMAG00000012240) s1pr5a (ENSKMAG00000012231) spc24 (ENSKMAG00000012212) kri1 (ENSKMAG00000012111) ldlra (ENSKMAG00000012041) smarca4a (ENSKMAG00000011931) ATG4D (ENSKMAG00000011884) MAST1 (ENSKMAG00000011861) ENSKMAG00000011834 rtbdn (ENSKMAG00000011820) Turquoise killifish MODERN SPECIES 1612 ENSNFUG00015016381 AANAT (ENSNFUG00015016392) ddx5 (ENSNFUG00015016414) smurf2 (ENSNFUG00015016691) ENSNFUG00015017161 KPNA2 (ENSNFUG00015017170) ENSNFUG00015017186 ENSNFUG00015017199 grb2b (ENSNFUG00015017212) USP43 (ENSNFUG00015017221) NTN1B (ENSNFUG00015017236) ENSNFUG00015017246 mfsd6l (ENSNFUG00015017252) TOM1 (ENSNFUG00015017264) GCAT (ENSNFUG00015017282) mcm5 (ENSNFUG00015017292) ##22 hmox1a (ENSNFUG00015017310) foxred2 (ENSNFUG00015017313) ankrd54 (ENSNFUG00015017321) HMGXB4 (ENSNFUG00015017370) ENSNFUG00015017401 foxd7 (ENSNFUG00015017403) S1PR5A (ENSNFUG00015017411) SPC24 (ENSNFUG00015017416) KRI1 (ENSNFUG00015017426) LDLR (ENSNFUG00015017463) ENSNFUG00015017623 ENSNFUG00015017627 smarca4a (ENSNFUG00015017646) ATG4D (ENSNFUG00015017721) MAST1 (ENSNFUG00015000406) Cyprinodontoidei ANCESTRAL SPECIES 22 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Poeciliinae ANCESTRAL SPECIES 1 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Poecilia ANCESTRAL SPECIES 18 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B NAME_6 ANCESTRAL SPECIES 40 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Amazon molly MODERN SPECIES 364 AANAT (ENSPFOG00000003689) ENSPFOG00000003745 ddx5 (ENSPFOG00000004109) smurf2 (ENSPFOG00000004347) kpna2 (ENSPFOG00000004947) ENSPFOG00000005085 ENSPFOG00000004833 grb2b (ENSPFOG00000005204) ENSPFOG00000005294 ntn1b (ENSPFOG00000005483) ENSPFOG00000005665 mfsd6l (ENSPFOG00000020946) zgc:171844 (ENSPFOG00000005970) tom1 (ENSPFOG00000006020) gcat (ENSPFOG00000006148) mcm5 (ENSPFOG00000006454) ##22 hmox1a (ENSPFOG00000006716) foxred2 (ENSPFOG00000006801) ankrd54 (ENSPFOG00000006969) hmgxb4a (ENSPFOG00000007097) si:dkeyp-69e1.8 (ENSPFOG00000007214) foxd7 (ENSPFOG00000020947) s1pr5a (ENSPFOG00000020948) spc24 (ENSPFOG00000007227) kri1 (ENSPFOG00000007297) ldlra (ENSPFOG00000007522) smarca4a (ENSPFOG00000007892) ATG4D (ENSPFOG00000008224) ENSPFOG00000008245 rtbdn (ENSPFOG00000008571) junbb (ENSPFOG00000008616) Sailfin molly MODERN SPECIES 1562 ENSPLAG00000000710 mfsd6l (ENSPLAG00000005903) zgc:171844 (ENSPLAG00000005901) ENSPLAG00000005882 gcat (ENSPLAG00000005875) mcm5 (ENSPLAG00000005853) ##22 hmox1a (ENSPLAG00000005805) foxred2 (ENSPLAG00000005577) ankrd54 (ENSPLAG00000000106) hmgxb4a (ENSPLAG00000005553) si:dkeyp-69e1.8 (ENSPLAG00000005544) foxd7 (ENSPLAG00000005529) s1pr5a (ENSPLAG00000005523) spc24 (ENSPLAG00000005511) kri1 (ENSPLAG00000005491) Platyfish MODERN SPECIES 7 wbp11 (ENSXMAG00000008281) AANAT (ENSXMAG00000008291) ENSXMAG00000008295 ddx5 (ENSXMAG00000008305) smurf2 (ENSXMAG00000008313) kpna2 (ENSXMAG00000008323) BPTF (ENSXMAG00000008341) grb2b (ENSXMAG00000004985) ENSXMAG00000008358 ntn1b (ENSXMAG00000014525) ENSXMAG00000014507 mfsd6l (ENSXMAG00000020358) zgc:171844 (ENSXMAG00000021641) ENSXMAG00000004607 gcat (ENSXMAG00000004589) mcm5 (ENSXMAG00000004527) ##22 hmox1a (ENSXMAG00000021191) foxred2 (ENSXMAG00000004517) ankrd54 (ENSXMAG00000004508) hmgxb4a (ENSXMAG00000004489) si:dkeyp-69e1.8 (ENSXMAG00000004487) foxd7 (ENSXMAG00000022105) s1pr5a (ENSXMAG00000019997) spc24 (ENSXMAG00000004479) kri1 (ENSXMAG00000004461) ldlra (ENSXMAG00000006284) smarca4a (ENSXMAG00000006321) ATG4D (ENSXMAG00000009160) MAST1 (ENSXMAG00000009142) rtbdn (ENSXMAG00000021867) hook2 (ENSXMAG00000009113) NAME_4 ANCESTRAL SPECIES 77 ENSGT01010000222553 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a ENSGT00940000160152 Mummichog MODERN SPECIES 2245 wbp11 (ENSFHEG00000011385) AANAT (ENSFHEG00000000906) ENSFHEG00000011357 ddx5 (ENSFHEG00000011093) smurf2 (ENSFHEG00000011037) kpna2 (ENSFHEG00000010921) BPTF (ENSFHEG00000010908) grb2b (ENSFHEG00000010825) ENSFHEG00000000822 ntn1b (ENSFHEG00000010775) PIK3R5 (ENSFHEG00000010740) mfsd6l (ENSFHEG00000010726) zgc:171844 (ENSFHEG00000010713) tom1 (ENSFHEG00000010571) gcat (ENSFHEG00000010474) mcm5 (ENSFHEG00000010419) ##22 hmox1a (ENSFHEG00000010353) foxred2 (ENSFHEG00000010341) ankrd54 (ENSFHEG00000010317) hmgxb4a (ENSFHEG00000010296) si:dkeyp-69e1.8 (ENSFHEG00000010271) foxd7 (ENSFHEG00000010262) spc24 (ENSFHEG00000010254) s1pr5a (ENSFHEG00000010242) kri1 (ENSFHEG00000010230) ldlra (ENSFHEG00000010208) smarca4a (ENSFHEG00000010182) ATG4D (ENSFHEG00000010060) MAST1 (ENSFHEG00000010045) rtbdn (ENSFHEG00000009971) junbb (ENSFHEG00000009954) Sheepshead minnow MODERN SPECIES 606 ENSCVAG00000002075 ENSCVAG00000002081 ENSCVAG00000002087 ntn1b (ENSCVAG00000002091) ENSCVAG00000002105 mfsd6l (ENSCVAG00000002114) zgc:171844 (ENSCVAG00000002122) tom1 (ENSCVAG00000002134) gcat (ENSCVAG00000002140) mcm5 (ENSCVAG00000002158) ##22 hmox1a (ENSCVAG00000002165) foxred2 (ENSCVAG00000002176) ankrd54 (ENSCVAG00000002186) hmgxb4a (ENSCVAG00000002197) si:dkeyp-69e1.8 (ENSCVAG00000002199) foxd7 (ENSCVAG00000002203) s1pr5a (ENSCVAG00000002205) Oryzias ANCESTRAL SPECIES ENSGT00940000155159.C.nb ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000177737 ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Oryzias_b ANCESTRAL SPECIES 42 ENSGT00940000155774.b ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b Indian medaka MODERN SPECIES 9 AANAT (ENSOMEG00000008215) ENSOMEG00000008269 ddx5 (ENSOMEG00000008354) smurf2 (ENSOMEG00000008441) kpna2 (ENSOMEG00000008498) ENSOMEG00000008535 ENSOMEG00000008562 grb2b (ENSOMEG00000008574) ENSOMEG00000008597 ntn1b (ENSOMEG00000001010) ENSOMEG00000008712 mfsd6l (ENSOMEG00000008731) zgc:171844 (ENSOMEG00000008764) tom1 (ENSOMEG00000008938) gcat (ENSOMEG00000008986) mcm5 (ENSOMEG00000009046) ##22 hmox1a (ENSOMEG00000009077) foxred2 (ENSOMEG00000009123) ankrd54 (ENSOMEG00000009146) hmgxb4a (ENSOMEG00000009171) si:dkeyp-69e1.8 (ENSOMEG00000009192) foxd7 (ENSOMEG00000009211) MAST1 (ENSOMEG00000009249) rtbdn (ENSOMEG00000009277) junbb (ENSOMEG00000009286) hook2 (ENSOMEG00000009418) trir (ENSOMEG00000009480) ubn2b (ENSOMEG00000009511) rpsa (ENSOMEG00000009576) slc25a38a (ENSOMEG00000009614) MYH9 (ENSOMEG00000009713) Javanese ricefish MODERN SPECIES 22 ddx47 (ENSOJAG00000002783) AANAT (ENSOJAG00000003354) ENSOJAG00000003369 ddx5 (ENSOJAG00000003430) smurf2 (ENSOJAG00000003743) kpna2 (ENSOJAG00000004010) BPTF (ENSOJAG00000004067) grb2b (ENSOJAG00000004222) ENSOJAG00000004253 ntn1b (ENSOJAG00000004295) ENSOJAG00000004354 mfsd6l (ENSOJAG00000004366) zgc:171844 (ENSOJAG00000004384) tom1 (ENSOJAG00000004430) gcat (ENSOJAG00000004511) mcm5 (ENSOJAG00000005020) ##22 hmox1a (ENSOJAG00000005083) ankrd54 (ENSOJAG00000005108) ENSOJAG00000005137 si:dkeyp-69e1.8 (ENSOJAG00000005167) foxd7 (ENSOJAG00000005177) EMP1 (ENSOJAG00000005182) GSG1 (ENSOJAG00000005197) ENSOJAG00000005260 GRIN2B (ENSOJAG00000005350) FMC1 (ENSOJAG00000006073) ENSOJAG00000006090 wbp2nl (ENSOJAG00000006098) ENSOJAG00000006117 rrp7a (ENSOJAG00000006156) ENSOJAG00000006181 Oryzias_a ANCESTRAL SPECIES 20 ENSGT00940000155159.C.nb ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605.i.a ENSGT00940000154819.a.b.c.a ENSGT00390000005605.i.b ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Japanese Medaka HdrR MODERN SPECIES 22 ddx5 (ENSORLG00000015098) smurf2 (ENSORLG00000015151) kpna2 (ENSORLG00000015192) ENSORLG00000015227 kpna2 (ENSORLG00000027099) ENSORLG00000021936 grb2b (ENSORLG00000015246) ENSORLG00000024072 ENSORLG00000024310 ntn1b (ENSORLG00000015276) ENSORLG00000015305 mfsd6l (ENSORLG00000023268) zgc:171844 (ENSORLG00000029943) tom1 (ENSORLG00000015311) gcat (ENSORLG00000010542) mcm5 (ENSORLG00000010517) ##22 hmox1a (ENSORLG00000010457) foxred2 (ENSORLG00000015336) ankrd54 (ENSORLG00000015347) hmgxb4a (ENSORLG00000015359) si:dkeyp-69e1.8 (ENSORLG00000015364) foxd7 (ENSORLG00000023860) s1pr5a (ENSORLG00000015375) spc24 (ENSORLG00000015391) kri1 (ENSORLG00000015403) ENSORLG00000025827 kri1 (ENSORLG00000030111) ENSORLG00000027952 ENSORLG00000019647 ENSORLG00000021901 ENSORLG00000028274 Chinese medaka MODERN SPECIES 1074 ddx47 (ENSOSIG00000017903) ENSOSIG00000017714 AANAT (ENSOSIG00000017671) ENSOSIG00000017664 ddx5 (ENSOSIG00000017077) smurf2 (ENSOSIG00000017049) kpna2 (ENSOSIG00000017046) BPTF (ENSOSIG00000017045) grb2b (ENSOSIG00000017042) ENSOSIG00000017039 ntn1b (ENSOSIG00000017038) PIK3R5 (ENSOSIG00000017034) mfsd6l (ENSOSIG00000017025) zgc:171844 (ENSOSIG00000017023) gcat (ENSOSIG00000017022) mcm5 (ENSOSIG00000017010) ##22 hmox1a (ENSOSIG00000017004) foxred2 (ENSOSIG00000016999) ankrd54 (ENSOSIG00000016998) s1pr5a (ENSOSIG00000016995) Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000155563.k.a ENSGT00910000148759 ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Cichlidae ANCESTRAL SPECIES 19 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT00910000148759 ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00940000163467.a.b.b.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Pseudocrenilabrinae_A ANCESTRAL SPECIES 27 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00940000163467.a.b.b.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Haplochromini ANCESTRAL SPECIES 32 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00940000163467.a.b.b.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Haplochromini_A ANCESTRAL SPECIES 34 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00940000163467.a.b.b.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Haplochromini_B ANCESTRAL SPECIES 31 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00940000163467.a.b.b.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Eastern happy MODERN SPECIES 16 smurf2 (ENSACLG00000018310) PLEKHF1 (ENSACLG00000018446) ENSACLG00000018454 kpna2 (ENSACLG00000018462) BPTF (ENSACLG00000018500) grb2b (ENSACLG00000018587) MCHR1 (ENSACLG00000018615) ENSACLG00000018643 ntn1b (ENSACLG00000018659) ENSACLG00000018682 ENSACLG00000018696 mfsd6l (ENSACLG00000018727) zgc:171844 (ENSACLG00000018735) tom1 (ENSACLG00000018763) gcat (ENSACLG00000018826) mcm5 (ENSACLG00000018865) ##22 hmox1a (ENSACLG00000018952) ENSACLG00000018971 foxred2 (ENSACLG00000018978) ankrd54 (ENSACLG00000019008) hmgxb4a (ENSACLG00000019023) si:dkeyp-69e1.8 (ENSACLG00000019084) foxd7 (ENSACLG00000019118) s1pr5a (ENSACLG00000000124) spc24 (ENSACLG00000000132) kri1 (ENSACLG00000000135) ldlra (ENSACLG00000000151) smarca4a (ENSACLG00000000163) ATG4D (ENSACLG00000000346) MAST1 (ENSACLG00000000372) ENSACLG00000000427 Zebra mbuna MODERN SPECIES 1107 ddx5 (ENSMZEG00005004609) smurf2 (ENSMZEG00005004539) PLEKHF1 (ENSMZEG00005004525) ENSMZEG00005004511 kpna2 (ENSMZEG00005004479) BPTF (ENSMZEG00005004427) grb2b (ENSMZEG00005004399) MCHR1 (ENSMZEG00005004395) USP43 (ENSMZEG00005004383) ntn1b (ENSMZEG00005004358) PIK3R5 (ENSMZEG00005004332) ENSMZEG00005004310 mfsd6l (ENSMZEG00005004295) tom1 (ENSMZEG00005004252) gcat (ENSMZEG00005004192) mcm5 (ENSMZEG00005004143) ##22 hmox1a (ENSMZEG00005004189) ENSMZEG00005004130 foxred2 (ENSMZEG00005004108) ankrd54 (ENSMZEG00005004094) hmgxb4a (ENSMZEG00005004079) si:dkeyp-69e1.8 (ENSMZEG00005004070) foxd7 (ENSMZEG00005004053) s1pr5a (ENSMZEG00005004045) spc24 (ENSMZEG00005004038) kri1 (ENSMZEG00005004013) ldlra (ENSMZEG00005003998) smarca4a (ENSMZEG00005003889) ATG4D (ENSMZEG00005003809) MAST1 (ENSMZEG00005003727) ENSMZEG00005003701 Burton s mouthbrooder MODERN SPECIES 350 ENSHBUG00000022027 ddx5 (ENSHBUG00000022017) smurf2 (ENSHBUG00000021985) kpna2 (ENSHBUG00000021904) BPTF (ENSHBUG00000021807) grb2b (ENSHBUG00000021749) MCHR1 (ENSHBUG00000021730) USP43 (ENSHBUG00000021716) ntn1b (ENSHBUG00000021688) PIK3R5 (ENSHBUG00000021650) ENSHBUG00000021620 mfsd6l (ENSHBUG00000021603) zgc:171844 (ENSHBUG00000021599) tom1 (ENSHBUG00000021554) gcat (ENSHBUG00000021527) mcm5 (ENSHBUG00000021496) ##22 hmox1a (ENSHBUG00000021422) ENSHBUG00000021412 foxred2 (ENSHBUG00000021404) ankrd54 (ENSHBUG00000021341) hmgxb4a (ENSHBUG00000021327) si:dkeyp-69e1.8 (ENSHBUG00000021253) foxd7 (ENSHBUG00000021244) s1pr5a (ENSHBUG00000021232) spc24 (ENSHBUG00000021224) kri1 (ENSHBUG00000021212) ldlra (ENSHBUG00000021197) smarca4a (ENSHBUG00000021172) ATG4D (ENSHBUG00000020894) MAST1 (ENSHBUG00000020881) ENSHBUG00000020862 Lyretail cichlid MODERN SPECIES 423 ENSNBRG00000012108 mcm5 (ENSNBRG00000012070) ##22 hmox1a (ENSNBRG00000011786) ENSNBRG00000011779 foxred2 (ENSNBRG00000011754) ankrd54 (ENSNBRG00000011732) hmgxb4a (ENSNBRG00000011693) si:dkeyp-69e1.8 (ENSNBRG00000011683) foxd7 (ENSNBRG00000011668) s1pr5a (ENSNBRG00000011662) spc24 (ENSNBRG00000011610) kri1 (ENSNBRG00000011580) ldlra (ENSNBRG00000011554) smarca4a (ENSNBRG00000011457) ATG4D (ENSNBRG00000011391) MAST1 (ENSNBRG00000011320) rtbdn (ENSNBRG00000011306) Nile tilapia MODERN SPECIES 16 ddx5 (ENSONIG00000008283) smurf2 (ENSONIG00000008278) kpna2 (ENSONIG00000008265) BPTF (ENSONIG00000008260) grb2 (ENSONIG00000038028) MCHR1 (ENSONIG00000008256) ENSONIG00000043066 ENSONIG00000033978 USP43 (ENSONIG00000029045) ntn1b (ENSONIG00000008254) ENSONIG00000008249 ENSONIG00000008242 zgc:171844 (ENSONIG00000038216) tom1 (ENSONIG00000008241) gcat (ENSONIG00000008236) mcm5 (ENSONIG00000008233) ##22 hmox1a (ENSONIG00000036898) ENSONIG00000021075 foxred2 (ENSONIG00000008228) ankrd54 (ENSONIG00000008226) hmgxb4a (ENSONIG00000008225) si:dkeyp-69e1.8 (ENSONIG00000008223) foxd7 (ENSONIG00000041330) s1pr5a (ENSONIG00000021073) spc24 (ENSONIG00000008221) kri1 (ENSONIG00000008218) ldlra (ENSONIG00000008214) smarca4a (ENSONIG00000008196) ATG4D (ENSONIG00000043096) MAST1 (ENSONIG00000008189) rtbdn (ENSONIG00000008184) Midas cichlid MODERN SPECIES 80 ddx5 (ENSACIG00000022414) smurf2 (ENSACIG00000022401) ENSACIG00000022395 kpna2 (ENSACIG00000022379) BPTF (ENSACIG00000022353) grb2b (ENSACIG00000022343) MCHR1 (ENSACIG00000022332) USP43 (ENSACIG00000022309) ntn1b (ENSACIG00000022295) ENSACIG00000022279 ENSACIG00000022268 mfsd6l (ENSACIG00000022258) zgc:171844 (ENSACIG00000022247) tom1 (ENSACIG00000022224) gcat (ENSACIG00000022210) mcm5 (ENSACIG00000022193) ##22 hmox1a (ENSACIG00000021980) foxred2 (ENSACIG00000021951) ankrd54 (ENSACIG00000021835) hmgxb4a (ENSACIG00000021800) si:dkeyp-69e1.8 (ENSACIG00000021792) foxd7 (ENSACIG00000021788) s1pr5a (ENSACIG00000021777) spc24 (ENSACIG00000021764) kri1 (ENSACIG00000021726) ldlra (ENSACIG00000021617) smarca4a (ENSACIG00000021550) ATG4D (ENSACIG00000021464) MAST1 (ENSACIG00000021403) rtbdn (ENSACIG00000021389) junbb (ENSACIG00000021369) Pomacentridae ANCESTRAL SPECIES 31 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Pomacentridae_A ANCESTRAL SPECIES 21 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605.k ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a.c ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Amphiprion ANCESTRAL SPECIES 25 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT01090000260059.a.b.b.b.a.d.a.a.b.b.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605.k ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a.c ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Clown anemonefish MODERN SPECIES 309 gcat (ENSAOCG00000024288) mcm5 (ENSAOCG00000024269) ##22 hmox1a (ENSAOCG00000024249) foxred2 (ENSAOCG00000024236) ankrd54 (ENSAOCG00000024221) Orange clownfish MODERN SPECIES 5 ddx5 (ENSAPEG00000014685) smurf2 (ENSAPEG00000014725) kpna2 (ENSAPEG00000014795) BPTF (ENSAPEG00000014853) grb2b (ENSAPEG00000014951) MCHR1 (ENSAPEG00000014979) ENSAPEG00000014997 ENSAPEG00000015011 ENSAPEG00000015047 ntn1b (ENSAPEG00000015091) ENSAPEG00000015127 mfsd6l (ENSAPEG00000015156) zgc:171844 (ENSAPEG00000015161) ENSAPEG00000015184 gcat (ENSAPEG00000015204) mcm5 (ENSAPEG00000015245) ##22 hmox1a (ENSAPEG00000015298) foxred2 (ENSAPEG00000015316) ankrd54 (ENSAPEG00000015351) hmgxb4a (ENSAPEG00000015362) si:dkeyp-69e1.8 (ENSAPEG00000015370) foxd7 (ENSAPEG00000015388) s1pr5a (ENSAPEG00000015400) spc24 (ENSAPEG00000015408) kri1 (ENSAPEG00000015417) ldlra (ENSAPEG00000015445) ENSAPEG00000015536 smarca4a (ENSAPEG00000015559) ENSAPEG00000015638 ATG4D (ENSAPEG00000015658) MAST1 (ENSAPEG00000015668) Spiny chromis MODERN SPECIES 89 AANAT (ENSAPOG00000002574) ENSAPOG00000002690 ddx5 (ENSAPOG00000002749) ENSAPOG00000002765 kpna2 (ENSAPOG00000002798) BPTF (ENSAPOG00000002827) grb2b (ENSAPOG00000002849) MCHR1 (ENSAPOG00000002857) ENSAPOG00000002886 ntn1b (ENSAPOG00000002919) ENSAPOG00000002939 mfsd6l (ENSAPOG00000002951) zgc:171844 (ENSAPOG00000002988) tom1 (ENSAPOG00000003037) gcat (ENSAPOG00000003080) mcm5 (ENSAPOG00000003163) ##22 hmox1a (ENSAPOG00000003093) foxred2 (ENSAPOG00000003223) ankrd54 (ENSAPOG00000003240) hmgxb4a (ENSAPOG00000003261) si:dkeyp-69e1.8 (ENSAPOG00000003274) foxd7 (ENSAPOG00000003284) ENSAPOG00000003312 s1pr5a (ENSAPOG00000003320) spc24 (ENSAPOG00000003328) kri1 (ENSAPOG00000003361) ldlra (ENSAPOG00000003428) smarca4a (ENSAPOG00000003509) ENSAPOG00000003542 ATG4D (ENSAPOG00000003552) ENSAPOG00000003617 Bicolor damselfish MODERN SPECIES 646 ENSSPAG00000004436 ddx5 (ENSSPAG00000004363) smurf2 (ENSSPAG00000004295) kpna2 (ENSSPAG00000004251) BPTF (ENSSPAG00000004153) grb2b (ENSSPAG00000004117) MCHR1 (ENSSPAG00000004099) ENSSPAG00000004057 ntn1b (ENSSPAG00000004031) PIK3R5 (ENSSPAG00000004009) mfsd6l (ENSSPAG00000004001) zgc:171844 (ENSSPAG00000003970) ENSSPAG00000003951 gcat (ENSSPAG00000003911) mcm5 (ENSSPAG00000003842) ##22 hmox1a (ENSSPAG00000003797) foxred2 (ENSSPAG00000003753) ankrd54 (ENSSPAG00000003741) hmgxb4a (ENSSPAG00000003688) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Eupercaria ANCESTRAL SPECIES 3 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Eupecaria_B ANCESTRAL SPECIES ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Perciformes ANCESTRAL SPECIES 1 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Cottioidei ANCESTRAL SPECIES 1 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Lumpfish MODERN SPECIES 23 ENSCLMG00005018441 ddx5 (ENSCLMG00005017968) smurf2 (ENSCLMG00005016605) kpna2 (ENSCLMG00005016519) BPTF (ENSCLMG00005016518) grb2b (ENSCLMG00005016517) MCHR1 (ENSCLMG00005016515) USP43 (ENSCLMG00005016506) ntn1b (ENSCLMG00005016505) PIK3R5 (ENSCLMG00005016499) ENSCLMG00005016494 mfsd6l (ENSCLMG00005016492) zgc:171844 (ENSCLMG00005016490) tom1 (ENSCLMG00005016489) gcat (ENSCLMG00005016299) mcm5 (ENSCLMG00005016272) ##22 hmox1a (ENSCLMG00005016269) foxred2 (ENSCLMG00005016267) ankrd54 (ENSCLMG00005016265) hmgxb4a (ENSCLMG00005016263) si:dkeyp-69e1.8 (ENSCLMG00005016262) foxd7 (ENSCLMG00005016261) s1pr5a (ENSCLMG00005016260) spc24 (ENSCLMG00005016259) kri1 (ENSCLMG00005016257) ldlra (ENSCLMG00005015217) smarca4a (ENSCLMG00005015175) ATG4D (ENSCLMG00005015166) MAST1 (ENSCLMG00005014982) rtbdn (ENSCLMG00005014980) junbb (ENSCLMG00005014979) Stickleback MODERN SPECIES 10 ENSGACG00000007073 AANAT (ENSGACG00000007070) ENSGACG00000007063 ddx5 (ENSGACG00000007026) smurf2 (ENSGACG00000007003) kpna2 (ENSGACG00000006925) BPTF (ENSGACG00000006907) grb2b (ENSGACG00000006896) USP43 (ENSGACG00000006879) ntn1b (ENSGACG00000006867) PIK3R5 (ENSGACG00000006852) ENSGACG00000006848 mfsd6l (ENSGACG00000006845) zgc:171844 (ENSGACG00000006843) tom1 (ENSGACG00000006786) mcm5 (ENSGACG00000006776) ##22 hmox1a (ENSGACG00000006771) foxred2 (ENSGACG00000006763) ankrd54 (ENSGACG00000006757) hmgxb4a (ENSGACG00000006744) si:dkeyp-69e1.8 (ENSGACG00000006740) s1pr5a (ENSGACG00000006737) spc24 (ENSGACG00000006733) kri1 (ENSGACG00000006712) ldlra (ENSGACG00000006705) smarca4a (ENSGACG00000006691) ENSGACG00000006688 MAST1 (ENSGACG00000006669) rtbdn (ENSGACG00000006658) junbb (ENSGACG00000006654) hook2 (ENSGACG00000006640) Perciformes_a ANCESTRAL SPECIES 1 ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Channel bull blenny MODERN SPECIES 22 AANAT (ENSCGOG00000008726) ENSCGOG00000008735 ddx5 (ENSCGOG00000008785) smurf2 (ENSCGOG00000010816) kpna2 (ENSCGOG00000010889) BPTF (ENSCGOG00000011148) grb2b (ENSCGOG00000011187) MCHR1 (ENSCGOG00000011216) ENSCGOG00000011220 ENSCGOG00000011225 ntn1b (ENSCGOG00000011229) mfsd6l (ENSCGOG00000011254) zgc:171844 (ENSCGOG00000011255) tom1 (ENSCGOG00000011258) gcat (ENSCGOG00000011272) mcm5 (ENSCGOG00000011316) ##22 hmox1a (ENSCGOG00000011632) foxred2 (ENSCGOG00000011637) ankrd54 (ENSCGOG00000011675) hmgxb4a (ENSCGOG00000011687) si:dkeyp-69e1.8 (ENSCGOG00000011695) foxd7 (ENSCGOG00000011699) s1pr5a (ENSCGOG00000011705) spc24 (ENSCGOG00000011708) kri1 (ENSCGOG00000011712) ldlra (ENSCGOG00000011766) smarca4a (ENSCGOG00000012016) ATG4D (ENSCGOG00000016428) MAST1 (ENSCGOG00000016453) rtbdn (ENSCGOG00000017728) junbb (ENSCGOG00000017729) Pike perch MODERN SPECIES 38 ENSSLUG00000006452 ddx5 (ENSSLUG00000006320) smurf2 (ENSSLUG00000006170) kpna2 (ENSSLUG00000006125) BPTF (ENSSLUG00000006059) grb2b (ENSSLUG00000006043) MCHR1 (ENSSLUG00000006040) USP43 (ENSSLUG00000005938) ntn1b (ENSSLUG00000005910) ENSSLUG00000005884 ENSSLUG00000005882 mfsd6l (ENSSLUG00000005875) zgc:171844 (ENSSLUG00000005864) ENSSLUG00000005849 gcat (ENSSLUG00000005665) mcm5 (ENSSLUG00000005621) ##22 hmox1a (ENSSLUG00000005599) foxred2 (ENSSLUG00000005588) ankrd54 (ENSSLUG00000005577) hmgxb4a (ENSSLUG00000005569) si:dkeyp-69e1.8 (ENSSLUG00000005562) foxd7 (ENSSLUG00000005557) s1pr5a (ENSSLUG00000005546) spc24 (ENSSLUG00000005537) kri1 (ENSSLUG00000005522) ldlra (ENSSLUG00000018042) smarca4a (ENSSLUG00000017847) ATG4D (ENSSLUG00000017825) MAST1 (ENSSLUG00000017811) rtbdn (ENSSLUG00000017798) junbb (ENSSLUG00000017793) Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Gilthead seabream MODERN SPECIES 15 AANAT (ENSSAUG00010003459) ENSSAUG00010003446 ddx5 (ENSSAUG00010003435) smurf2 (ENSSAUG00010003098) kpna2 (ENSSAUG00010003066) BPTF (ENSSAUG00010002959) grb2b (ENSSAUG00010002918) MCHR1 (ENSSAUG00010002913) ENSSAUG00010002905 ntn1b (ENSSAUG00010002889) ENSSAUG00010002823 mfsd6l (ENSSAUG00010025872) zgc:171844 (ENSSAUG00010025871) tom1 (ENSSAUG00010025869) gcat (ENSSAUG00010025862) mcm5 (ENSSAUG00010025861) ##22 hmox1a (ENSSAUG00010025859) foxred2 (ENSSAUG00010025858) ankrd54 (ENSSAUG00010025857) hmgxb4a (ENSSAUG00010025855) si:dkeyp-69e1.8 (ENSSAUG00010025854) foxd7 (ENSSAUG00010025853) s1pr5a (ENSSAUG00010025851) spc24 (ENSSAUG00010025850) kri1 (ENSSAUG00010025845) ldlra (ENSSAUG00010025481) smarca4a (ENSSAUG00010025438) ATG4D (ENSSAUG00010025435) MAST1 (ENSSAUG00010025250) rtbdn (ENSSAUG00010025236) junbb (ENSSAUG00010025234) Eupercaria_incertae_sedis ANCESTRAL SPECIES 26 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a European seabass MODERN SPECIES 21 ENSDLAG00005032961 ENSDLAG00005002653 ENSDLAG00005031456 ENSDLAG00005029425 ENSDLAG00005025471 ENSDLAG00005030127 ENSDLAG00005004657 ENSDLAG00005031824 ENSDLAG00005003683 ENSDLAG00005031261 ENSDLAG00005031572 ENSDLAG00005029130 mfsd6l (ENSDLAG00005033039) tom1 (ENSDLAG00005025467) gcat (ENSDLAG00005025460) mcm5 (ENSDLAG00005025443) ##22 hmox1a (ENSDLAG00005025440) foxred2 (ENSDLAG00005025435) ankrd54 (ENSDLAG00005025423) si:dkeyp-69e1.8 (ENSDLAG00005025420) foxd7 (ENSDLAG00005030410) s1pr5a (ENSDLAG00005034138) spc24 (ENSDLAG00005025414) kri1 (ENSDLAG00005025407) ldlra (ENSDLAG00005025005) smarca4a (ENSDLAG00005024921) ENSDLAG00005024911 MAST1 (ENSDLAG00005024754) rtbdn (ENSDLAG00005029809) junbb (ENSDLAG00005024718) hook2 (ENSDLAG00005024232) Large yellow croaker MODERN SPECIES 483 smurf2 (ENSLCRG00005016850) kpna2 (ENSLCRG00005016840) grb2b (ENSLCRG00005016831) MCHR1 (ENSLCRG00005016827) ENSLCRG00005016824 ntn1b (ENSLCRG00005016822) PIK3R5 (ENSLCRG00005016820) ENSLCRG00005016814 mfsd6l (ENSLCRG00005016813) zgc:171844 (ENSLCRG00005016811) ENSLCRG00005016810 ENSLCRG00005016809 ENSLCRG00005016808 tom1 (ENSLCRG00005016807) gcat (ENSLCRG00005016803) mcm5 (ENSLCRG00005016396) ##22 hmox1a (ENSLCRG00005016391) foxred2 (ENSLCRG00005016389) ankrd54 (ENSLCRG00005016377) hmgxb4a (ENSLCRG00005016374) si:dkeyp-69e1.8 (ENSLCRG00005016373) foxd7 (ENSLCRG00005016371) s1pr5a (ENSLCRG00005016370) spc24 (ENSLCRG00005016367) ENSLCRG00005016364 kri1 (ENSLCRG00005016338) ldlra (ENSLCRG00005011815) ENSLCRG00005011744 ENSLCRG00005011737 AATK (ENSLCRG00005011717) baiap2a (ENSLCRG00005011647) Ballan wrasse MODERN SPECIES 1123 ENSLBEG00000023526 zgc:171844 (ENSLBEG00000023540) tom1 (ENSLBEG00000023580) gcat (ENSLBEG00000023624) mcm5 (ENSLBEG00000023667) ##22 hmox1a (ENSLBEG00000023720) foxred2 (ENSLBEG00000023749) ankrd54 (ENSLBEG00000023786) hmgxb4a (ENSLBEG00000023804) Tetraodontidae ANCESTRAL SPECIES 129 ENSGT00950000183099 ENSGT00940000155858.e ENSGT00390000012267 ENSGT00940000156887.a ENSGT00390000005605 ENSGT00390000005584 ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b Fugu MODERN SPECIES 17 MYH9 (ENSTRUG00000001884) txn2 (ENSTRUG00000023239) rpsa (ENSTRUG00000004566) ENSTRUG00000021400 trir (ENSTRUG00000001301) smarca4a (ENSTRUG00000004885) kri1 (ENSTRUG00000006542) spc24 (ENSTRUG00000025492) ENSTRUG00000006605 tom1 (ENSTRUG00000006642) gcat (ENSTRUG00000006966) mcm5 (ENSTRUG00000007135) ##22 foxred2 (ENSTRUG00000007543) hmgxb4a (ENSTRUG00000007724) si:dkeyp-69e1.8 (ENSTRUG00000022413) ENSTRUG00000007739 GPRC5D (ENSTRUG00000007937) ENSTRUG00000032462 ENSTRUG00000008001 ENSTRUG00000008012 ntn1b (ENSTRUG00000008060) ENSTRUG00000008211 grb2 (ENSTRUG00000008254) ENSTRUG00000031478 BPTF (ENSTRUG00000008386) smurf2 (ENSTRUG00000009018) ddx5 (ENSTRUG00000009308) Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 rgs16 (ENSTNIG00000019494) ENSTNIG00000019807 myo1cb (ENSTNIG00000019590) ENSTNIG00000009969 ENSTNIG00000019591 ENSTNIG00000001738 rpl7l1 (ENSTNIG00000019645) ENSTNIG00000019461 ssr3 (ENSTNIG00000019580) ENSTNIG00000001173 ctsc (ENSTNIG00000019526) ENSTNIG00000019809 ENSTNIG00000019774 fbxl16 (ENSTNIG00000019777) ENSTNIG00000019802 ENSTNIG00000019600 ##22 ENSTNIG00000019810 SNX4 (ENSTNIG00000019499) ENSTNIG00000019486 canx (ENSTNIG00000019468) tmx2b (ENSTNIG00000019533) nelfe (ENSTNIG00000019831) ENSTNIG00000000273 ENSTNIG00000019836 ENSTNIG00000019541 SLC1A3 (ENSTNIG00000019525) ENSTNIG00000019598 irx3a (ENSTNIG00000019841) ENSTNIG00000019670 ENSTNIG00000019604 ENSTNIG00000001613 Tetraodon MODERN SPECIES 26 ENSTNIG00000001528 ENSTNIG00000005704 ENSTNIG00000005703 ENSTNIG00000005697 ENSTNIG00000005687 ifitm5 (ENSTNIG00000005679) cat (ENSTNIG00000005678) syt12 (ENSTNIG00000005677) rbm4.3 (ENSTNIG00000005668) ENSTNIG00000005661 ENSTNIG00000005660 tyr (ENSTNIG00000005655) ENSTNIG00000005654 ENSTNIG00000005653 hnrnpc (ENSTNIG00000000334) ENSTNIG00000005632 ##22 agr2 (ENSTNIG00000005629) ppp1r10 (ENSTNIG00000005628) ENSTNIG00000005627 ENSTNIG00000001424 b2m (ENSTNIG00000001604) ENSTNIG00000005626 ENSTNIG00000005625 ENSTNIG00000005624 ENSTNIG00000005623 ENSTNIG00000005622 ENSTNIG00000005618 ENSTNIG00000005617 inppl1a (ENSTNIG00000005603) phox2a (ENSTNIG00000005602) ENSTNIG00000005601 Tetraodon MODERN SPECIES 26 ARSJ (ENSTNIG00000000803) mad2l1 (ENSTNIG00000006315) ENSTNIG00000006314 pde5ab (ENSTNIG00000006313) zcchc4 (ENSTNIG00000006312) grin2bb (ENSTNIG00000006276) ENSTNIG00000006275 f8a (ENSTNIG00000006274) emp1 (ENSTNIG00000006273) ENSTNIG00000006272 rbfox2 (ENSTNIG00000006271) kri1 (ENSTNIG00000006263) spc24 (ENSTNIG00000006262) tom1 (ENSTNIG00000006261) gcat (ENSTNIG00000006260) mcm5 (ENSTNIG00000006259) ##22 dsc2l (ENSTNIG00000006258) ENSTNIG00000006252 ENSTNIG00000006251 ENSTNIG00000001683 ENSTNIG00000006250 gga1 (ENSTNIG00000006248) ENSTNIG00000006247 ENSTNIG00000006246 MPV17L (ENSTNIG00000006245) bmerb1 (ENSTNIG00000006244) ENSTNIG00000006243 panx1b (ENSTNIG00000006242) ENSTNIG00000006231 TRAK1 (ENSTNIG00000006230) si:ch211-225p5.8 (ENSTNIG00000006224) Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Anabantoidei ANCESTRAL SPECIES 7 ENSGT00940000155774.b ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT01030000234881 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B Climbing perch MODERN SPECIES 21 kpna2 (ENSATEG00000010592) ENSATEG00000010614 grb2b (ENSATEG00000025778) ENSATEG00000010810 ENSATEG00000010789 ENSATEG00000010834 ENSATEG00000010875 ENSATEG00000010889 ENSATEG00000010903 ntn1b (ENSATEG00000004066) PIK3R5 (ENSATEG00000010968) mfsd6l (ENSATEG00000010980) zgc:171844 (ENSATEG00000010985) tom1 (ENSATEG00000010996) gcat (ENSATEG00000011027) mcm5 (ENSATEG00000011079) ##22 hmox1a (ENSATEG00000026604) foxred2 (ENSATEG00000011159) ankrd54 (ENSATEG00000011200) hmgxb4a (ENSATEG00000011233) si:dkeyp-69e1.8 (ENSATEG00000028983) foxd7 (ENSATEG00000011254) ENSATEG00000011261 s1pr5a (ENSATEG00000011280) spc24 (ENSATEG00000025331) kri1 (ENSATEG00000011294) ldlra (ENSATEG00000011318) ENSATEG00000011473 smarca4a (ENSATEG00000011524) ENSATEG00000011639 MAST1 (ENSATEG00000011656) Siamese fighting fish MODERN SPECIES 19 AANAT (ENSBSLG00000010414) ENSBSLG00000010396 ddx5 (ENSBSLG00000010232) smurf2 (ENSBSLG00000009278) kpna2 (ENSBSLG00000009207) BPTF (ENSBSLG00000009018) grb2b (ENSBSLG00000008940) ENSBSLG00000008480 ntn1b (ENSBSLG00000008236) PIK3R5 (ENSBSLG00000007699) ENSBSLG00000007698 mfsd6l (ENSBSLG00000007696) tom1 (ENSBSLG00000007690) ENSBSLG00000007686 gcat (ENSBSLG00000007653) mcm5 (ENSBSLG00000007575) ##22 hmox1a (ENSBSLG00000007561) ankrd54 (ENSBSLG00000007549) ENSBSLG00000007547 hmgxb4a (ENSBSLG00000007543) si:dkeyp-69e1.8 (ENSBSLG00000007541) foxd7 (ENSBSLG00000007540) s1pr5a (ENSBSLG00000007536) spc24 (ENSBSLG00000007535) kri1 (ENSBSLG00000007526) ldlra (ENSBSLG00000007510) smarca4a (ENSBSLG00000007418) ATG4D (ENSBSLG00000007413) ENSBSLG00000007367 rtbdn (ENSBSLG00000007358) junbb (ENSBSLG00000007355) Zig-zag eel MODERN SPECIES 22 ENSMAMG00000008808 ddx5 (ENSMAMG00000008781) smurf2 (ENSMAMG00000008702) kpna2 (ENSMAMG00000008685) ENSMAMG00000008663 grb2b (ENSMAMG00000027586) ENSMAMG00000008623 USP43 (ENSMAMG00000008613) ntn1b (ENSMAMG00000008579) PIK3R5 (ENSMAMG00000008557) PIK3R6 (ENSMAMG00000008538) mfsd6l (ENSMAMG00000025339) zgc:171844 (ENSMAMG00000008507) tom1 (ENSMAMG00000008469) gcat (ENSMAMG00000008447) mcm5 (ENSMAMG00000008389) ##22 hmox1a (ENSMAMG00000028242) foxred2 (ENSMAMG00000008352) ankrd54 (ENSMAMG00000008322) hmgxb4a (ENSMAMG00000008307) si:dkeyp-69e1.8 (ENSMAMG00000008300) s1pr5a (ENSMAMG00000008282) ENSMAMG00000008278 kri1 (ENSMAMG00000008253) ENSMAMG00000026730 ndufa6 (ENSMAMG00000028307) triobpb (ENSMAMG00000008212) nol12 (ENSMAMG00000008197) srebf2 (ENSMAMG00000008175) ENSMAMG00000008163 ENSMAMG00000008151 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Carangaria_A ANCESTRAL SPECIES 12 ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Seriola ANCESTRAL SPECIES 23 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000180418 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a Greater amberjack MODERN SPECIES 225 AANAT (ENSSDUG00000017999) ENSSDUG00000017971 ddx5 (ENSSDUG00000017954) smurf2 (ENSSDUG00000017889) kpna2 (ENSSDUG00000017866) BPTF (ENSSDUG00000017789) grb2b (ENSSDUG00000017768) MCHR1 (ENSSDUG00000017748) USP43 (ENSSDUG00000017730) ntn1b (ENSSDUG00000017718) PIK3R5 (ENSSDUG00000017697) mfsd6l (ENSSDUG00000017690) zgc:171844 (ENSSDUG00000017674) tom1 (ENSSDUG00000017623) gcat (ENSSDUG00000017601) mcm5 (ENSSDUG00000017539) ##22 hmox1a (ENSSDUG00000017522) foxred2 (ENSSDUG00000017501) ankrd54 (ENSSDUG00000017492) hmgxb4a (ENSSDUG00000017480) si:dkeyp-69e1.8 (ENSSDUG00000017466) foxd7 (ENSSDUG00000017459) s1pr5a (ENSSDUG00000017452) spc24 (ENSSDUG00000017432) kri1 (ENSSDUG00000017395) ldlra (ENSSDUG00000017366) smarca4a (ENSSDUG00000017298) ATG4D (ENSSDUG00000017265) MAST1 (ENSSDUG00000017147) rtbdn (ENSSDUG00000017125) junbb (ENSSDUG00000017119) Yellowtail amberjack MODERN SPECIES 3214 ENSSLDG00000024110 ddx5 (ENSSLDG00000024131) smurf2 (ENSSLDG00000024154) kpna2 (ENSSLDG00000024201) BPTF (ENSSLDG00000024210) grb2b (ENSSLDG00000024248) MCHR1 (ENSSLDG00000024259) ENSSLDG00000024265 ENSSLDG00000024270 ntn1b (ENSSLDG00000024278) PIK3R5 (ENSSLDG00000024284) mfsd6l (ENSSLDG00000024296) zgc:171844 (ENSSLDG00000024299) tom1 (ENSSLDG00000024310) gcat (ENSSLDG00000024328) mcm5 (ENSSLDG00000024344) ##22 hmox1a (ENSSLDG00000024376) foxred2 (ENSSLDG00000024389) ankrd54 (ENSSLDG00000024403) hmgxb4a (ENSSLDG00000024411) si:dkeyp-69e1.8 (ENSSLDG00000024430) foxd7 (ENSSLDG00000024433) s1pr5a (ENSSLDG00000024435) spc24 (ENSSLDG00000024439) kri1 (ENSSLDG00000024449) ldlra (ENSSLDG00000024476) smarca4a (ENSSLDG00000024486) ATG4D (ENSSLDG00000024552) MAST1 (ENSSLDG00000024572) ENSSLDG00000024651 rtbdn (ENSSLDG00000024661) Barramundi perch MODERN SPECIES 138 ddx5 (ENSLCAG00010000385) smurf2 (ENSLCAG00010000253) kpna2 (ENSLCAG00010000179) ENSLCAG00010000151 ENSLCAG00010000136 grb2b (ENSLCAG00010000133) MCHR1 (ENSLCAG00010021062) USP43 (ENSLCAG00010021058) ntn1b (ENSLCAG00010021046) PIK3R5 (ENSLCAG00010021035) ENSLCAG00010021029 mfsd6l (ENSLCAG00010021027) zgc:171844 (ENSLCAG00010021024) tom1 (ENSLCAG00010021017) gcat (ENSLCAG00010021011) mcm5 (ENSLCAG00010020992) ##22 hmox1a (ENSLCAG00010020980) foxred2 (ENSLCAG00010020974) ankrd54 (ENSLCAG00010020969) hmgxb4a (ENSLCAG00010020965) si:dkeyp-69e1.8 (ENSLCAG00010020962) foxd7 (ENSLCAG00010020945) s1pr5a (ENSLCAG00010020943) spc24 (ENSLCAG00010020940) kri1 (ENSLCAG00010020932) ldlra (ENSLCAG00010020566) smarca4a (ENSLCAG00010020479) ENSLCAG00010020430 ATG4D (ENSLCAG00010020427) MAST1 (ENSLCAG00010020419) rtbdn (ENSLCAG00010020407) Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00940000155774.b ENSGT00390000015579.a.b ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000160152 Tongue sole MODERN SPECIES 8 rtbdn (ENSCSEG00000014991) MAST1 (ENSCSEG00000014975) ATG4D (ENSCSEG00000014816) smarca4a (ENSCSEG00000014771) ldlra (ENSCSEG00000014678) kri1 (ENSCSEG00000014632) spc24 (ENSCSEG00000014595) s1pr5a (ENSCSEG00000014590) foxd7 (ENSCSEG00000014582) si:dkeyp-69e1.8 (ENSCSEG00000014574) ntn1b (ENSCSEG00000014566) ENSCSEG00000014558 mfsd6l (ENSCSEG00000014552) tom1 (ENSCSEG00000014540) gcat (ENSCSEG00000014525) mcm5 (ENSCSEG00000014503) ##22 hmox1a (ENSCSEG00000014482) foxred2 (ENSCSEG00000014468) ankrd54 (ENSCSEG00000014415) hmgxb4a (ENSCSEG00000014399) ENSCSEG00000014381 grb2b (ENSCSEG00000014367) BPTF (ENSCSEG00000014334) kpna2 (ENSCSEG00000014324) ENSCSEG00000014318 smurf2 (ENSCSEG00000014278) ddx5 (ENSCSEG00000014167) ENSCSEG00000014150 CASKIN1 (ENSCSEG00000014114) traf7 (ENSCSEG00000014096) gng13b (ENSCSEG00000014087) Turbot MODERN SPECIES 10 ENSSMAG00000004014 ddx5 (ENSSMAG00000003994) smurf2 (ENSSMAG00000003854) kpna2 (ENSSMAG00000003821) ENSSMAG00000031402 ENSSMAG00000003767 grb2b (ENSSMAG00000031390) ENSSMAG00000003709 ENSSMAG00000027086 ntn1b (ENSSMAG00000003692) ENSSMAG00000003654 mfsd6l (ENSSMAG00000003647) zgc:171844 (ENSSMAG00000003644) tom1 (ENSSMAG00000003633) gcat (ENSSMAG00000003602) mcm5 (ENSSMAG00000003553) ##22 foxred2 (ENSSMAG00000003473) ankrd54 (ENSSMAG00000003542) ENSSMAG00000034140 hmgxb4a (ENSSMAG00000003433) si:dkeyp-69e1.8 (ENSSMAG00000003420) foxd7 (ENSSMAG00000003416) s1pr5a (ENSSMAG00000003411) spc24 (ENSSMAG00000025121) kri1 (ENSSMAG00000003342) ldlra (ENSSMAG00000003321) smarca4a (ENSSMAG00000003200) ENSSMAG00000003181 ENSSMAG00000003147 rtbdn (ENSSMAG00000003131) ENSSMAG00000003103 Pinecone sodierfish MODERN SPECIES 22 ddx5 (ENSMMDG00005004891) smurf2 (ENSMMDG00005005577) kpna2 (ENSMMDG00005006234) BPTF (ENSMMDG00005006263) grb2b (ENSMMDG00005006274) MCHR1 (ENSMMDG00005006280) USP43 (ENSMMDG00005006287) ENSMMDG00005006312 ntn1b (ENSMMDG00005006316) ENSMMDG00005006322 mfsd6l (ENSMMDG00005006327) zgc:171844 (ENSMMDG00005006328) tom1 (ENSMMDG00005006330) gcat (ENSMMDG00005006353) nudcd3 (ENSMMDG00005006377) mcm5 (ENSMMDG00005006384) ##22 hmox1a (ENSMMDG00005006394) foxred2 (ENSMMDG00005006400) ankrd54 (ENSMMDG00005006413) hmgxb4a (ENSMMDG00005006426) si:dkeyp-69e1.8 (ENSMMDG00005006430) foxd7 (ENSMMDG00005006431) s1pr5a (ENSMMDG00005006433) spc24 (ENSMMDG00005006434) kri1 (ENSMMDG00005006438) ldlra (ENSMMDG00005006489) smarca4a (ENSMMDG00005010874) ENSMMDG00005019256 ATG4D (ENSMMDG00005019261) ENSMMDG00005019264 rtbdn (ENSMMDG00005019269) Cod MODERN SPECIES 23 ENSGMOG00000015047 ENSGMOG00000034152 ENSGMOG00000036645 ENSGMOG00000025716 tom1 (ENSGMOG00000037190) ENSGMOG00000009256 mcm5 (ENSGMOG00000009241) ##22 ENSGMOG00000034924 ENSGMOG00000000924 ENSGMOG00000029260 ENSGMOG00000020100 ENSGMOG00000023351 ENSGMOG00000014426 ENSGMOG00000014415 ENSGMOG00000024064 ENSGMOG00000036928 ENSGMOG00000022980 ENSGMOG00000034365 ENSGMOG00000014006 ENSGMOG00000014078 Protacanthopterygii ANCESTRAL SPECIES 8 ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729.r ENSGT01050000244824.G ##22 ENSGT00390000017673.b.l ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g ENSGT00940000165343.c.b ENSGT00940000157140.b.b.b ENSGT00470000042444 ENSGT00940000161143 ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000154705.A.a ENSGT00940000155563.k.a.c ENSGT01050000244891.E.a.b.e ENSGT00940000154830.c ENSGT00940000155738.l ENSGT00940000154272.B.b.d ENSGT00940000158772.b ENSGT00940000157016.f ENSGT00940000153882.a.b.a.b ENSGT00530000063753.B.d.d ENSGT00530000063753.A.b.d ENSGT00530000063599.A ENSGT00440000038745.a.a.b ENSGT00940000156865.b ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k ##22 ENSGT00390000017673.b.l.b ENSGT00640000091519 ENSGT00940000157805 ENSGT00390000012436.g.f ENSGT00940000165343.c.b.d ENSGT00940000157140.b.b.b.c.b ENSGT01030000234940.h.a ENSGT00990000210763 ENSGT01050000244887.A.a.a.a.j ENSGT00390000005584.a.a ENSGT00390000005605.f ENSGT00940000154819.a.b.c.a.g ENSGT00940000156887.a.e ENSGT00950000182923.A.ib.a.a ENSGT00530000063000.a.a.b.i.c.b Salmoninae_a ANCESTRAL SPECIES 37 ENSGT00940000154705.A.a.g ENSGT00940000155563.k.a.d.a.b ENSGT01050000244891.E.a.b.e ENSGT00940000154830.c ENSGT00940000155738.l ENSGT00940000154272.B.b.d ENSGT00940000158772.b ENSGT00940000157016.f ENSGT00940000153882.a.b.a.b ENSGT00530000063753.B.d.d ENSGT00530000063753.A.b.d ENSGT00530000063599.A.g ENSGT00440000038745.a.a.b.a ENSGT00940000156865.b ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k ##22 ENSGT00390000017673.b.l.b.a ENSGT00640000091519.e ENSGT00940000157805.h ENSGT00390000012436.g.f ENSGT00940000165343.c.b.d ENSGT00940000157140.b.b.b.c.a ENSGT00940000160757 ENSGT00990000210763 ENSGT01050000244887.A.a.a.a.j.d ENSGT00390000005584.a.b ENSGT00390000005605.e ENSGT00940000154819.a.b.c.a.g ENSGT00940000156887.a.e ENSGT00950000182923.A.ib.a.a ENSGT00530000063000.a.a.b.i.c.b Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 65 ENSGT00940000154705.A.a.g ENSGT00940000155563.k.a.d.a.b ENSGT01050000244891.E.a.b.e ENSGT00940000154830.c.d ENSGT00940000155738.l ENSGT00940000154272.B.b.d ENSGT00940000158772.b.j ENSGT01010000222336.a.a.a.a.b.e.b.b ENSGT00940000153882.a.b.a.b.f ENSGT00530000063753.B.d.c ENSGT00530000063753.A.b.c ENSGT00530000063599.A.h ENSGT00440000038745.a.a.b.a.a.a.b ENSGT00940000156865.b.f ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k.a ##22 ENSGT00390000017673.b.l.b.a ENSGT00640000091519.f.a ENSGT00940000157805.h ENSGT00390000012436.g.f ENSGT00940000165343.c.b.d ENSGT00940000157140.b.b.b.c.a ENSGT00940000160757.n ENSGT00990000210763.a ENSGT01050000244887.A.a.a.a.j.d ENSGT00390000005584.a.b ENSGT00390000005605.e ENSGT00940000154819.a.b.c.a.g.b ENSGT00940000156887.a.e.c.a.a ENSGT00950000182923.A.ib.a.a ENSGT00530000063000.a.a.b.i.c.b Rainbow trout MODERN SPECIES 4 smurf2 (ENSOMYG00000026065) kpna2 (ENSOMYG00000025741) ENSOMYG00000023910 grb2b (ENSOMYG00000023274) ENSOMYG00000023250 ENSOMYG00000074034 ENSOMYG00000023195 ENSOMYG00000023163 ntn1b (ENSOMYG00000023128) ENSOMYG00000052090 ENSOMYG00000023105 mfsd6l (ENSOMYG00000070250) zgc:171844 (ENSOMYG00000023053) tom1 (ENSOMYG00000023003) gcat (ENSOMYG00000022783) mcm5 (ENSOMYG00000022528) ##22 hmox1a (ENSOMYG00000022498) ENSOMYG00000022488 ankrd54 (ENSOMYG00000022483) hmgxb4a (ENSOMYG00000022467) si:dkeyp-69e1.8 (ENSOMYG00000022458) foxd7 (ENSOMYG00000022453) il-8 (ENSOMYG00000022444) ENSOMYG00000022433 s1pr5a (ENSOMYG00000022427) spc24 (ENSOMYG00000022421) kri1 (ENSOMYG00000022391) ENSOMYG00000067083 ldlra (ENSOMYG00000021575) smarca4a (ENSOMYG00000021175) ENSOMYG00000021049 Oncorhynchus_a ANCESTRAL SPECIES 44 ENSGT00940000155729.r.b ENSGT01050000244824.G.k.b ##22 ENSGT00390000017673.b.l.b.b ENSGT00640000091519.f.b ENSGT00940000157805.g ENSGT00390000012436.g.e ENSGT00940000165343.c.b.c ENSGT00940000157140.b.b.b.c.b ENSGT00530000063753.B.d.c ENSGT00530000063753.A.b.c ENSGT00530000063599.A.h ENSGT00440000038745.a.a.b.b ENSGT00440000038745.a.a.b.a.a.a.b ENSGT00940000156865.b.f ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k.a ##22 ENSGT00390000017673.b.l.b.a ENSGT00640000091519.f.a ENSGT00940000157805.h ENSGT00390000012436.g.f ENSGT00940000165343.c.b.d ENSGT00940000157140.b.b.b.c.a ENSGT00940000160757.n ENSGT00990000210763.a ENSGT01050000244887.A.a.a.a.j.d ENSGT00390000005584.a.b ENSGT00390000005605.e ENSGT00940000154819.a.b.c.a.g.b ENSGT00940000156887.a.e.c.a.a ENSGT00950000182923.A.ib.a.a ENSGT00530000063000.a.a.b.i.c.b Chinook salmon MODERN SPECIES 2944 ENSOTSG00005045521 ENSOTSG00005045520 ENSOTSG00005045519 mfsd6l (ENSOTSG00005045518) zgc:171844 (ENSOTSG00005045516) tom1 (ENSOTSG00005045515) gcat (ENSOTSG00005045509) mcm5 (ENSOTSG00005045493) ##22 hmox1a (ENSOTSG00005045492) foxred2 (ENSOTSG00005045490) ankrd54 (ENSOTSG00005045489) hmgxb4a (ENSOTSG00005045488) si:dkeyp-69e1.8 (ENSOTSG00005045486) foxd7 (ENSOTSG00005045485) ENSOTSG00005045484 s1pr5a (ENSOTSG00005045483) spc24 (ENSOTSG00005045482) kri1 (ENSOTSG00005045480) ldlra (ENSOTSG00005045479) Coho salmon MODERN SPECIES 1 ddx5 (ENSOKIG00005016748) smurf2 (ENSOKIG00005015481) kpna2 (ENSOKIG00005015351) BPTF (ENSOKIG00005015013) grb2b (ENSOKIG00005014956) MCHR1 (ENSOKIG00005014946) ENSOKIG00005014936 ENSOKIG00005014887 ntn1b (ENSOKIG00005014857) ENSOKIG00005014842 ENSOKIG00005014826 mfsd6l (ENSOKIG00005014808) zgc:171844 (ENSOKIG00005014803) tom1 (ENSOKIG00005014794) gcat (ENSOKIG00005014637) mcm5 (ENSOKIG00005014560) ##22 hmox1a (ENSOKIG00005014543) foxred2 (ENSOKIG00005014539) ankrd54 (ENSOKIG00005014514) hmgxb4a (ENSOKIG00005014505) si:dkeyp-69e1.8 (ENSOKIG00005014497) foxd7 (ENSOKIG00005014487) ENSOKIG00005014478 ENSOKIG00005014394 s1pr5a (ENSOKIG00005022154) spc24 (ENSOKIG00005022132) kri1 (ENSOKIG00005022118) ldlra (ENSOKIG00005022079) smarca4a (ENSOKIG00005021743) ENSOKIG00005021672 ATG4D (ENSOKIG00005021601) Oncorhynchus ANCESTRAL SPECIES 37 ENSGT00390000015579.a.b.e ENSGT00940000153578.A.e.h ENSGT00940000154705.A.a.h ENSGT00940000155563.k.a.c.b ENSGT00940000155563.k.a.d.a.a ENSGT01050000244891.E.a.b.f ENSGT00940000154830.c.c ENSGT00940000158772.b.i ENSGT00940000153882.a.b.a.b.e ENSGT00530000063753.B.d.d ENSGT00530000063753.A.b.d ENSGT00530000063599.A.g ENSGT00440000038745.a.a.b.a.a.a.a ENSGT00940000156865.b.e ENSGT00940000155729.r.b ENSGT01050000244824.G.k.b ##22 ENSGT00390000017673.b.l.b.b ENSGT00640000091519.f.b ENSGT00940000157805.g ENSGT00390000012436.g.e ENSGT00940000165343.c.b.c ENSGT00940000157140.b.b.b.c.b ENSGT00940000156887.a.e.c.b ENSGT00950000182923.A.hb ENSGT00530000063000.a.a.b.i.c.a ENSGT00940000157700.d.a.b ENSGT00950000183144.B.ab ENSGT00940000154277.b.b.b.b.a.b ENSGT00940000154277.b.b.b.a ENSGT00940000161195.a.a.f ENSGT00940000160152.k.b Oncorhynchus_a ANCESTRAL SPECIES 44 ENSGT00940000154705.A.a.g ENSGT00940000155563.k.a.d.a.b ENSGT01050000244891.E.a.b.e ENSGT00940000154830.c.d ENSGT00940000155738.l ENSGT00940000154272.B.b.d ENSGT00940000158772.b.j ENSGT01010000222336.a.a.a.a.b.e.b.b ENSGT00940000153882.a.b.a.b.f ENSGT00530000063753.B.d.d ENSGT00530000063753.A.b.d ENSGT00530000063599.A.g ENSGT00440000038745.a.a.b.a.a.a.a ENSGT00940000156865.b.e ENSGT00940000155729.r.b ENSGT01050000244824.G.k.b ##22 ENSGT00390000017673.b.l.b.b ENSGT00640000091519.f.b ENSGT00940000157805.g ENSGT00390000012436.g.e ENSGT00940000165343.c.b.c ENSGT00940000157140.b.b.b.c.b ENSGT00530000063753.B.d.c ENSGT00530000063753.A.b.c ENSGT00530000063599.A.h ENSGT00440000038745.a.a.b.b ENSGT00440000038745.a.a.b.a.a.a.b ENSGT00940000156865.b.f ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k.a ##22 ENSGT00390000017673.b.l.b.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 71 ddx5 (ENSOTSG00005038400) smurf2 (ENSOTSG00005038397) kpna2 (ENSOTSG00005038373) ENSOTSG00005038372 BPTF (ENSOTSG00005038370) grb2b (ENSOTSG00005038369) MCHR1 (ENSOTSG00005038367) ENSOTSG00005038363 ntn1b (ENSOTSG00005038362) PIK3R5 (ENSOTSG00005038359) ENSOTSG00005038358 mfsd6l (ENSOTSG00005038357) zgc:171844 (ENSOTSG00005038356) tom1 (ENSOTSG00005038355) GCAT (ENSOTSG00005038354) mcm5 (ENSOTSG00005038299) ##22 hmox1a (ENSOTSG00005038296) foxred2 (ENSOTSG00005038294) ankrd54 (ENSOTSG00005038293) hmgxb4a (ENSOTSG00005038292) si:dkeyp-69e1.8 (ENSOTSG00005038290) ENSOTSG00005038287 ENSOTSG00005038285 s1pr5a (ENSOTSG00005038283) spc24 (ENSOTSG00005038282) kri1 (ENSOTSG00005038278) ldlra (ENSOTSG00005037915) ENSOTSG00005037904 pgbd5 (ENSOTSG00005037903) cog2 (ENSOTSG00005037533) ENSOTSG00005037524 Chinook salmon MODERN SPECIES 67 SPHK1 (ENSOTSG00005025966) AANAT (ENSOTSG00005025968) ENSOTSG00005026130 ddx5 (ENSOTSG00005026131) smurf2 (ENSOTSG00005026480) kpna2 (ENSOTSG00005026496) grb2b (ENSOTSG00005026523) MCHR1 (ENSOTSG00005026525) ntn1b (ENSOTSG00005026532) PIK3R5 (ENSOTSG00005026546) ENSOTSG00005026548 mfsd6l (ENSOTSG00005026549) zgc:171844 (ENSOTSG00005026550) tom1 (ENSOTSG00005026554) GCAT (ENSOTSG00005026557) mcm5 (ENSOTSG00005026560) ##22 hmox1a (ENSOTSG00005026589) foxred2 (ENSOTSG00005026591) ankrd54 (ENSOTSG00005026592) hmgxb4a (ENSOTSG00005026593) si:dkeyp-69e1.8 (ENSOTSG00005026594) foxd7 (ENSOTSG00005026595) ENSOTSG00005026596 ENSOTSG00005026597 s1pr5a (ENSOTSG00005026600) spc24 (ENSOTSG00005026601) kri1 (ENSOTSG00005033397) ldlra (ENSOTSG00005033419) ENSOTSG00005034002 Coho salmon MODERN SPECIES 26 AANAT (ENSOKIG00005020609) ENSOKIG00005020595 ddx5 (ENSOKIG00005020487) smurf2 (ENSOKIG00005020176) kpna2 (ENSOKIG00005020107) BPTF (ENSOKIG00005018652) ENSOKIG00005018558 grb2b (ENSOKIG00005018542) ENSOKIG00005018511 ntn1b (ENSOKIG00005018448) PIK3R5 (ENSOKIG00005018384) ENSOKIG00005018364 mfsd6l (ENSOKIG00005018356) zgc:171844 (ENSOKIG00005018348) tom1 (ENSOKIG00005018334) mcm5 (ENSOKIG00005018292) ##22 hmox1a (ENSOKIG00005018274) foxred2 (ENSOKIG00005018222) ankrd54 (ENSOKIG00005018189) hmgxb4a (ENSOKIG00005018178) si:dkeyp-69e1.8 (ENSOKIG00005018169) foxd7 (ENSOKIG00005018155) ENSOKIG00005018149 ENSOKIG00005018132 ENSOKIG00005018117 ENSOKIG00005018100 s1pr5a (ENSOKIG00005018093) spc24 (ENSOKIG00005018079) kri1 (ENSOKIG00005018066) ldlra (ENSOKIG00005017598) ENSOKIG00005017571 Rainbow trout MODERN SPECIES 3 ENSOMYG00000032042 ENSOMYG00000032007 ddx5 (ENSOMYG00000031942) smurf2 (ENSOMYG00000030503) kpna2 (ENSOMYG00000029971) ENSOMYG00000029781 grb2b (ENSOMYG00000029504) ENSOMYG00000029478 ntn1b (ENSOMYG00000029443) PIK3R5 (ENSOMYG00000029423) ENSOMYG00000029386 mfsd6l (ENSOMYG00000029377) zgc:171844 (ENSOMYG00000029371) tom1 (ENSOMYG00000029327) ENSOMYG00000029268 mcm5 (ENSOMYG00000029221) ##22 hmox1a (ENSOMYG00000029140) ENSOMYG00000051884 foxred2 (ENSOMYG00000029047) ankrd54 (ENSOMYG00000029023) hmgxb4a (ENSOMYG00000029002) si:dkeyp-69e1.8 (ENSOMYG00000028962) foxd7 (ENSOMYG00000056670) CXCL8 (ENSOMYG00000028934) s1pr5a (ENSOMYG00000028915) spc24 (ENSOMYG00000028907) kri1 (ENSOMYG00000028885) ldlra (ENSOMYG00000028150) smarca4a (ENSOMYG00000027454) ENSOMYG00000027277 ENSOMYG00000027267 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 69 ENSGT00940000154705.A.a.h ENSGT00940000155563.k.a.d.b ENSGT01050000244891.E.a.b.f ENSGT00940000154830.c.f ENSGT00940000155738.l.j ENSGT00940000154272.B.b.d ENSGT00940000158772.b.l ENSGT00940000157016.f ENSGT00940000153882.a.b.a.b.c ENSGT00530000063753.B.d.d ENSGT00530000063753.A.b.d ENSGT00530000063599.A.g ENSGT00440000038745.a.a.b.a ENSGT00940000156865.b.h ENSGT00940000155729.r.a.b ENSGT01050000244824.G.k.c ##22 ENSGT00390000017673.b.l.a ENSGT00640000091519.f ENSGT00940000157805.g ENSGT00390000012436.g.f.b ENSGT00940000160757.k ENSGT01050000244887.A.a.a.a.j.c ENSGT00390000005605.f ENSGT00940000154819.a.b.c.a.h ENSGT00940000156887.a.e.b ENSGT00530000063000.a.a.b.i.c.b ENSGT00940000157700.d.b ENSGT00950000183144.B.`b ENSGT00940000154277.b.b.b.b.b ENSGT00940000161195.a.a.f ENSGT00940000160152.k.b Atlantic salmon MODERN SPECIES 22 ENSSSAG00000086351 grb2 (ENSSSAG00000000363) ENSSSAG00000000345 ENSSSAG00000071050 ENSSSAG00000121736 ENSSSAG00000112530 ENSSSAG00000005380 ENSSSAG00000070957 ntn1b (ENSSSAG00000070934) ENSSSAG00000089137 ENSSSAG00000070894 ENSSSAG00000100063 zgc:171844 (ENSSSAG00000070861) tom1 (ENSSSAG00000091826) gcat (ENSSSAG00000070799) mcm5 (ENSSSAG00000040979) ##22 hmox1a (ENSSSAG00000070727) foxred2 (ENSSSAG00000070717) hmgxb4a (ENSSSAG00000026951) si:dkeyp-69e1.8 (ENSSSAG00000070767) mip2a (ENSSSAG00000070770) ENSSSAG00000006510 s1pr5a (ENSSSAG00000089324) kri1 (ENSSSAG00000070681) ldlra (ENSSSAG00000069976) smarca4a (ENSSSAG00000069499) ENSSSAG00000085374 MAST1 (ENSSSAG00000068180) rtbdn (ENSSSAG00000001518) ENSSSAG00000117056 junbb (ENSSSAG00000084114) River trout MODERN SPECIES 25 ddx5 (ENSSTUG00000006014) smurf2 (ENSSTUG00000005836) kpna2 (ENSSTUG00000005802) BPTF (ENSSTUG00000005314) grb2b (ENSSTUG00000005261) MCHR1 (ENSSTUG00000005253) USP43 (ENSSTUG00000005234) cfap52 (ENSSTUG00000005213) ntn1b (ENSSTUG00000005150) PIK3R5 (ENSSTUG00000005105) PIK3R6 (ENSSTUG00000005023) mfsd6l (ENSSTUG00000005014) zgc:171844 (ENSSTUG00000004996) tom1 (ENSSTUG00000004954) gcat (ENSSTUG00000004921) mcm5 (ENSSTUG00000004887) ##22 hmox1a (ENSSTUG00000004862) foxred2 (ENSSTUG00000004843) ankrd54 (ENSSTUG00000004828) hmgxb4a (ENSSTUG00000004802) si:dkeyp-69e1.8 (ENSSTUG00000004797) foxd7 (ENSSTUG00000004790) ENSSTUG00000004785 ENSSTUG00000004778 s1pr5a (ENSSTUG00000004772) spc24 (ENSSTUG00000004767) kri1 (ENSSTUG00000004737) ldlra (ENSSTUG00000004443) smarca4a (ENSSTUG00000003900) ATG4D (ENSSTUG00000019419) MAST1 (ENSSTUG00000018719) Salmo ANCESTRAL SPECIES 53 ENSGT00940000155563.k.a.c.b ENSGT00940000155563.k.a.c.a ENSGT01050000244891.E.a.b.e ENSGT00940000154830.c.e ENSGT00940000155738.l.i.a ENSGT00940000154272.B.b.c ENSGT00940000158772.b.k ENSGT01010000222336.a.a.a.a.b.e.b.b ENSGT00940000153882.a.b.a.b.d ENSGT00530000063753.B.d.c ENSGT00530000063753.A.b.c ENSGT00530000063599.A.h ENSGT00440000038745.a.a.b.b ENSGT00940000156865.b.g ENSGT00940000155729.r.a.a ENSGT01050000244824.G.k.d ##22 ENSGT00390000017673.b.l.b.a ENSGT00640000091519.e ENSGT00390000012436.g.f.a ENSGT00940000165343.c.b.d ENSGT00940000157140.b.b.b.c.a ENSGT00940000160757.l ENSGT00990000210763 ENSGT01050000244887.A.a.a.a.j.d ENSGT00390000005584.b ENSGT00390000005605.e ENSGT00940000154819.a.b.c.a.g ENSGT00940000156887.a.e.a ENSGT00950000182923.A.ib.a.a ENSGT00530000063000.a.a.b.i.c.a ENSGT00940000157700.d.a.a River trout MODERN SPECIES smurf2 (ENSSTUG00000015453) kpna2 (ENSSTUG00000015346) BPTF (ENSSTUG00000013591) grb2b (ENSSTUG00000013521) MCHR1 (ENSSTUG00000013511) ENSSTUG00000013494 cfap52 (ENSSTUG00000013460) ENSSTUG00000013305 ntn1b (ENSSTUG00000013267) ENSSTUG00000013256 ENSSTUG00000013230 mfsd6l (ENSSTUG00000013226) zgc:171844 (ENSSTUG00000013217) tom1 (ENSSTUG00000013164) gcat (ENSSTUG00000012850) mcm5 (ENSSTUG00000012738) ##22 hmox1a (ENSSTUG00000012728) ENSSTUG00000012711 ankrd54 (ENSSTUG00000012695) hmgxb4a (ENSSTUG00000012674) si:dkeyp-69e1.8 (ENSSTUG00000012665) foxd7 (ENSSTUG00000012658) ENSSTUG00000012638 ENSSTUG00000012498 s1pr5a (ENSSTUG00000012490) spc24 (ENSSTUG00000012473) kri1 (ENSSTUG00000012419) ldlra (ENSSTUG00000012337) smarca4a (ENSSTUG00000004756) ENSSTUG00000004499 ATG4D (ENSSTUG00000004457) Huchen MODERN SPECIES 1635 cfap52 (ENSHHUG00000032618) ENSHHUG00000032580 ntn1b (ENSHHUG00000032557) ENSHHUG00000032554 ENSHHUG00000032546 mfsd6l (ENSHHUG00000032544) zgc:171844 (ENSHHUG00000032539) tom1 (ENSHHUG00000032527) gcat (ENSHHUG00000032430) mcm5 (ENSHHUG00000032329) ##22 hmox1a (ENSHHUG00000032325) foxred2 (ENSHHUG00000032320) ankrd54 (ENSHHUG00000032305) hmgxb4a (ENSHHUG00000032289) si:dkeyp-69e1.8 (ENSHHUG00000032280) foxd7 (ENSHHUG00000032271) Salmoninae ANCESTRAL SPECIES ENSGT01050000244824.G.l ##22 Huchen MODERN SPECIES 317 ENSHHUG00000040027 ENSHHUG00000040020 cfap52 (ENSHHUG00000039983) ntn1b (ENSHHUG00000039945) PIK3R5 (ENSHHUG00000039925) PIK3R6 (ENSHHUG00000039910) mfsd6l (ENSHHUG00000039905) zgc:171844 (ENSHHUG00000039893) tom1 (ENSHHUG00000039854) gcat (ENSHHUG00000039789) mcm5 (ENSHHUG00000039650) ##22 hmox1a (ENSHHUG00000039640) foxred2 (ENSHHUG00000039634) ankrd54 (ENSHHUG00000039611) hmgxb4a (ENSHHUG00000039598) si:dkeyp-69e1.8 (ENSHHUG00000039593) foxd7 (ENSHHUG00000039586) ENSHHUG00000039565 s1pr5a (ENSHHUG00000039562) spc24 (ENSHHUG00000039554) kri1 (ENSHHUG00000039523) ldlra (ENSHHUG00000039243) smarca4a (ENSHHUG00000039198) ENSHHUG00000039187 ENSHHUG00000039166 ATG4D (ENSHHUG00000039142) Salmoninae_a ANCESTRAL SPECIES ENSGT01050000244824.G.l ##22 Salmo ANCESTRAL SPECIES ENSGT01050000244824.G.l ##22 Atlantic salmon MODERN SPECIES 25 ENSSSAG00000120961 ddx5 (ENSSSAG00000000911) smurf2 (ENSSSAG00000000791) kpna2 (ENSSSAG00000005410) ENSSSAG00000000506 GRB2 (ENSSSAG00000005393) ENSSSAG00000005383 ENSSSAG00000087643 ENSSSAG00000009617 ntn1b (ENSSSAG00000075407) PIK3R5 (ENSSSAG00000005939) ENSSSAG00000005952 zgc:171844 (ENSSSAG00000110747) tom1 (ENSSSAG00000099257) gcat (ENSSSAG00000004922) mcm5 (ENSSSAG00000005359) ##22 HMOX (ENSSSAG00000006231) foxred2 (ENSSSAG00000006269) hmgxb4a (ENSSSAG00000006466) si:dkeyp-69e1.8 (ENSSSAG00000006481) foxd7 (ENSSSAG00000105207) il8 (ENSSSAG00000006498) ENSSSAG00000006518 s1pr5a (ENSSSAG00000121767) kri1 (ENSSSAG00000005024) ldlra (ENSSSAG00000005295) smarca4a (ENSSSAG00000096866) ENSSSAG00000008548 ENSSSAG00000008557 MAST1 (ENSSSAG00000008779) rbp (ENSSSAG00000108597) Northern pike MODERN SPECIES 10 ENSELUG00000010434 ABCC1 (ENSELUG00000000373) ENSELUG00000010316 ENSELUG00000010305 ENSELUG00000010272 smarca4a (ENSELUG00000010247) ldlra (ENSELUG00000010150) kri1 (ENSELUG00000010137) spc24 (ENSELUG00000010106) s1pr5a (ENSELUG00000010090) foxd7 (ENSELUG00000010078) si:dkeyp-69e1.8 (ENSELUG00000010066) hmgxb4a (ENSELUG00000010039) ankrd54 (ENSELUG00000009995) foxred2 (ENSELUG00000009953) mcm5 (ENSELUG00000009925) ##22 hmox1a (ENSELUG00000009818) gcat (ENSELUG00000009760) tom1 (ENSELUG00000009734) zgc:171844 (ENSELUG00000009715) mfsd6l (ENSELUG00000001441) ENSELUG00000009671 ntn1b (ENSELUG00000009578) ENSELUG00000001614 grb2b (ENSELUG00000009534) BPTF (ENSELUG00000009441) kpna2 (ENSELUG00000009253) smurf2 (ENSELUG00000009222) ddx5 (ENSELUG00000009107) ENSELUG00000009065 AANAT (ENSELUG00000009012) Osteoglossiformes ANCESTRAL SPECIES 64 ENSGT00390000012258 ENSGT00530000063707.a.e ENSGT00940000155964.g ENSGT00940000157896.jb.a ENSGT01050000244814.a.a.a.b ENSGT00950000182696.A.a.a.b ENSGT00940000155083.a ENSGT00940000157534.a.b ENSGT00950000182961.a.b.b ENSGT00390000013260.A.b ENSGT00390000003753.c ENSGT00710000107036.a.a ENSGT00940000155774.b ENSGT00940000156865.b ENSGT00940000155729 ENSGT01050000244824.G ##22 ENSGT00640000091519 ENSGT00940000157805 ENSGT00940000157140.b.b.a ENSGT01050000244887.A.a.a.a.k ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00950000182923.A.s ENSGT00940000157700.b ENSGT00950000183144.B.db.b ENSGT00940000154277.b.b.b ENSGT00940000161195.a.a.b ENSGT00940000160152.n ENSGT00390000003817.d Asian bonytongue MODERN SPECIES 18 ENSSFOG00015027450 atf7ip (ENSSFOG00015012687) GRIN2B (ENSSFOG00015012813) ENSSFOG00015025633 GSG1 (ENSSFOG00015013225) emp1 (ENSSFOG00015030357) ENSSFOG00015013268 ENSSFOG00015013291 ENSSFOG00015013307 pde6ha (ENSSFOG00015032155) ENSSFOG00015013360 ENSSFOG00015027877 ddx47 (ENSSFOG00015013392) gcat (ENSSFOG00015013409) ENSSFOG00015013478 mcm5 (ENSSFOG00015013517) ##22 foxred2 (ENSSFOG00015013582) ENSSFOG00015013623 S1PR5 (ENSSFOG00015024243) spc24 (ENSSFOG00015013634) kri1 (ENSSFOG00015013646) CDKN2D (ENSSFOG00015032731) ldlra (ENSSFOG00015013750) smarca4a (ENSSFOG00015013823) ENSSFOG00015013947 MAST1 (ENSSFOG00015013958) rtbdn (ENSSFOG00015014018) ENSSFOG00015014054 junbb (ENSSFOG00015009655) HOOK2 (ENSSFOG00015014239) get3 (ENSSFOG00015027208) P. kingsleyae MODERN SPECIES 250 wbp2nl (ENSPKIG00000007181) ENSPKIG00000007161 atf7ip (ENSPKIG00000007136) GRIN2B (ENSPKIG00000007087) ENSPKIG00000007034 emp1 (ENSPKIG00000006995) ENSPKIG00000006929 ENSPKIG00000006854 GPRC5D (ENSPKIG00000006830) pde6ha (ENSPKIG00000006811) ENSPKIG00000006797 ENSPKIG00000006775 ddx47 (ENSPKIG00000006718) tom1 (ENSPKIG00000006675) gcat (ENSPKIG00000006643) mcm5 (ENSPKIG00000006585) ##22 foxred2 (ENSPKIG00000006531) ankrd54 (ENSPKIG00000006491) SUZ12 (ENSPKIG00000006402) ENSPKIG00000006357 rhot1a (ENSPKIG00000006135) zgc:153240 (ENSPKIG00000006019) ZNF207 (ENSPKIG00000005998) Reedfish MODERN SPECIES 3 atp7a (ENSECRG00000010050) pgk1 (ENSECRG00000010096) AMOT (ENSECRG00000010134) ENSECRG00000010186 ENSECRG00000010236 ENSECRG00000010261 ENSECRG00000010271 rpsa (ENSECRG00000010296) ttc26 (ENSECRG00000010323) ubn2a (ENSECRG00000010350) slc25a38b (ENSECRG00000010365) myh9a (ENSECRG00000010385) txn2 (ENSECRG00000010423) foxred2 (ENSECRG00000010429) ENSECRG00000010437 mcm5 (ENSECRG00000010450) ##22 gcat (ENSECRG00000010470) ENSECRG00000010520 ENSECRG00000010524 ENSECRG00000010534 ENSECRG00000010539 ENSECRG00000010544 hmgxb4a (ENSECRG00000010550) ankrd54 (ENSECRG00000010562) eif3s6ip (ENSECRG00000010578) ENSECRG00000010603 ENSECRG00000010627 ENSECRG00000010634 htr2cl1 (ENSECRG00000010648) il13ra2 (ENSECRG00000010675) LRCH2 (ENSECRG00000010701) Ecdysozoa ANCESTRAL SPECIES ENSGT01050000244824.G ##22 Caenorhabditis elegans MODERN SPECIES 2 lcmt-1 (WBGene00007137) B0285.3 (WBGene00007136) cdk-12 (WBGene00007135) gly-6 (WBGene00001631) H38K22.9 (WBGene00284844) H38K22.7 (WBGene00044912) H38K22.6 (WBGene00044911) tag-131 (WBGene00006478) dcn-1 (WBGene00010428) evl-14 (WBGene00001352) R10E4.9 (WBGene00011205) R10E4.11 (WBGene00011206) R10E4.7 (WBGene00011203) R10E4.6 (WBGene00011202) nth-1 (WBGene00011201) mcm-5 (WBGene00003157) ##22 R10E4.3 (WBGene00011200) sup-26 (WBGene00006331) R10E4.1 (WBGene00011198) sftb-1 (WBGene00011605) T08A11.1 (WBGene00011604) Y44F5A.1 (WBGene00012858) zhit-2 (WBGene00009648) mrpl-21 (WBGene00023422) F43C1.7 (WBGene00023423) nhr-20 (WBGene00003619) F43C1.5 (WBGene00009649) mpk-1 (WBGene00003401) phlp-2 (WBGene00009647) R74.8 (WBGene00011282) R74.7 (WBGene00011281) Fruitfly MODERN SPECIES 19 tomboy20 (FBgn0037828) TkR86C (FBgn0004841) CG14691 (FBgn0037829) CG31272 (FBgn0051272) MED7 (FBgn0051390) Cap-H2 (FBgn0037831) TfIIFbeta (FBgn0010421) CG45076 (FBgn0266446) fau (FBgn0266451) CG45078 (FBgn0266448) Desi (FBgn0037832) CG42633 (FBgn0261356) mRpL37 (FBgn0261380) Rbp1 (FBgn0260944) Art1 (FBgn0037834) Mcm5 (FBgn0017577) ##22 CG14687 (FBgn0037835) CG14692 (FBgn0037836) CG14693 (FBgn0037837) TTLL15 (FBgn0037838) Cad86C (FBgn0261053) CG42394 (FBgn0259740) CG4565 (FBgn0037841) CG6567 (FBgn0037842) CG4511 (FBgn0037843) CG4570 (FBgn0037844) CG14694 (FBgn0037845) CG6574 (FBgn0037846) SelR (FBgn0267376) Tsp86D (FBgn0037848) Fdh (FBgn0011768)