Mus	ANCESTRAL SPECIES	12	ENSGT00940000156977	ENSGT00940000153110.A	ENSGT00940000162216	ENSGT00390000015136	ENSGT00940000161154	ENSGT00390000004778	ENSGT01030000234553.b.b.d.c.b.a.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a	ENSGT00940000159178	ENSGT00390000000903.b	ENSGT01050000244850.A.b	ENSGT00860000136124 #20	ENSGT00390000016807 #21	ENSGT01050000244824.F #22	ENSGT00730000111323 #23	ENSGT00390000017131 #25	ENSGT00390000011364 #26	ENSGT00940000156836 #27	ENSGT00390000003721.d.a #28	ENSGT00940000153556.A #29	ENSGT00940000158170 #30	ENSGT00940000162567 #31	ENSGT00900000143259 #32	ENSGT00940000156315 #33	ENSGT00390000009630 #34	ENSGT00940000155864.a.b.s #35	ENSGT00730000111536	ENSGT00390000018439 #36	ENSGT00390000016313.a.b #37
Mus_A	ANCESTRAL SPECIES	7	ENSGT00950000183042.b	ENSGT00940000160913	ENSGT00940000156977	ENSGT00940000153110.A	ENSGT00940000162216	ENSGT00390000015136	ENSGT00940000161154	ENSGT00390000004778	ENSGT01030000234553.b.b.d.c.b.a.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.b	ENSGT00940000159178	ENSGT00390000000903.b	ENSGT01050000244850.A.b	ENSGT00860000136124 #20	ENSGT00390000016807 #21	ENSGT01050000244824.F #22	ENSGT00730000111323 #23	ENSGT00390000017131 #25	ENSGT00390000011364 #26	ENSGT00940000156836 #27	ENSGT00390000003721.d.a #28	ENSGT00940000153556.A.g.a #29	ENSGT00940000158170 #30	ENSGT00940000162567 #31	ENSGT00900000143259 #32	ENSGT00940000156315 #33	ENSGT00390000009630 #34	ENSGT00940000155864.a.b.s #35	ENSGT00730000111536	ENSGT00390000018439 #36	ENSGT00390000016313.a.b #37
Mus_B	ANCESTRAL SPECIES	15	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.b.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.b.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.b	ENSGT00940000159178	ENSGT00390000000903.b	ENSGT01050000244850.A.b	ENSGT00860000136124 #20	ENSGT00390000016807 #21	ENSGT01050000244824.F #22	ENSGT00730000111323 #23	ENSGT00390000017131 #25	ENSGT00390000011364 #26	ENSGT00940000156836 #27	ENSGT00390000003721.d.a #28	ENSGT00940000153556.A.g.a #29	ENSGT00940000158170 #30	ENSGT00940000162567 #31	ENSGT00900000143259 #32	ENSGT00940000156315 #33	ENSGT00390000009630 #34	ENSGT00940000155864.a.b.s #35	ENSGT00730000111536	ENSGT00390000018439 #36	ENSGT00390000016313.a.b #37
Mus_C	ANCESTRAL SPECIES	18	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.a.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.b.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.d.b.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.a.b.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.a.a	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.a.a.c.a.b	ENSGT01030000234553.b.b.d.c.b.a.a.a.a.a.b.b.b.a.a.a	ENSGT00940000159178	ENSGT00390000000903.b	ENSGT01050000244850.A.b	ENSGT00860000136124 #20	ENSGT00390000016807 #21	ENSGT01050000244824.F #22	ENSGT00730000111323 #23	ENSGT00390000017131 #25	ENSGT00390000011364 #26	ENSGT00940000156836 #27	ENSGT00390000003721.d.a #28	ENSGT00940000153556.A.g.a #29	ENSGT00940000158170 #30	ENSGT00940000162567 #31	ENSGT00900000143259 #32	ENSGT00940000156315 #33	ENSGT00390000009630 #34	ENSGT00940000155864.a.b.s #35	ENSGT00730000111536	ENSGT00390000018439 #36	ENSGT00390000016313.a.b #37
Steppe mouse	MODERN SPECIES	3245													ENSMSIG00000013044 #19	ENSMSIG00000013052 #20	Tpra1 (ENSMSIG00000013070) #21	Mcm2 (ENSMSIG00000013116) #22	Podxl2 (ENSMSIG00000013198) #23	ENSMSIG00000013222 #24	Abtb1 (ENSMSIG00000013235) #25	Mgll (ENSMSIG00000013258) #26	Kbtbd12 (ENSMSIG00000013327) #27	Sec61a1 (ENSMSIG00000013368) #28	Ruvbl1 (ENSMSIG00000013395) #29	Eefsec (ENSMSIG00000013446) #30	Dnajb8 (ENSMSIG00000013500) #31	ENSMSIG00000013506 #32	Gata2 (ENSMSIG00000013519) #33	Rpn1 (ENSMSIG00000013555) #34	Rab7 (ENSMSIG00000013617) #35	Hmces (ENSMSIG00000013812) #36	Copg1 (ENSMSIG00000013836) #37
spretus	MODERN SPECIES	15	Vmn1r50 (MGP_SPRETEiJ_G0029662)	Vmn1r49 (MGP_SPRETEiJ_G0029661)	MGP_SPRETEiJ_G0029660	MGP_SPRETEiJ_G0029659	MGP_SPRETEiJ_G0029658	MGP_SPRETEiJ_G0029657	Vmn1r43 (MGP_SPRETEiJ_G0029656)	Vmn1r42 (MGP_SPRETEiJ_G0029655)	MGP_SPRETEiJ_G0029654	MGP_SPRETEiJ_G0029653	Txnrd3 (MGP_SPRETEiJ_G0029652)	MGP_SPRETEiJ_G0029651	Plxna1 (MGP_SPRETEiJ_G0029650)	MGP_SPRETEiJ_G0029649 #20	Tpra1 (MGP_SPRETEiJ_G0029648) #21	Mcm2 (MGP_SPRETEiJ_G0029647) #22	Podxl2 (MGP_SPRETEiJ_G0029646) #23	Abtb1 (MGP_SPRETEiJ_G0029645) #25	Mgll (MGP_SPRETEiJ_G0029644) #26	Kbtbd12 (MGP_SPRETEiJ_G0029643) #27	Sec61a1 (MGP_SPRETEiJ_G0029642) #28	Ruvbl1 (MGP_SPRETEiJ_G0029641) #29	Eefsec (MGP_SPRETEiJ_G0029640) #30	Dnajb8 (MGP_SPRETEiJ_G0029639) #31	Gata2 (MGP_SPRETEiJ_G0029638) #33	Rpn1 (MGP_SPRETEiJ_G0029637) #34	Rab7 (MGP_SPRETEiJ_G0029636) #35	MGP_SPRETEiJ_G0029635	Hmces (MGP_SPRETEiJ_G0029634) #36	Copg1 (MGP_SPRETEiJ_G0029633) #37	Cnbp (MGP_SPRETEiJ_G0029632)
Mouse	MODERN SPECIES	15	Vmn1r50 (ENSMUSG00000094553)	Vmn1r49 (ENSMUSG00000095932)	Vmn1r48 (ENSMUSG00000057592)	Vmn1r47 (ENSMUSG00000060724)	Vmn1r46 (ENSMUSG00000061653)	Vmn1r45 (ENSMUSG00000044248)	Vmn1r44 (ENSMUSG00000068234)	Vmn1r43 (ENSMUSG00000068231)	Vmn1r42 (ENSMUSG00000068232)	Vmn1r41 (ENSMUSG00000094586)	Vmn1r40 (ENSMUSG00000096051)	Txnrd3 (ENSMUSG00000000811)	Chchd6 (ENSMUSG00000030086)	Plxna1 (ENSMUSG00000030084)	Tpra1 (ENSMUSG00000002871) #21	Mcm2 (ENSMUSG00000002870) #22	Podxl2 (ENSMUSG00000033152) #23	Abtb1 (ENSMUSG00000030083) #25	Mgll (ENSMUSG00000033174) #26	Kbtbd12 (ENSMUSG00000033182) #27	Sec61a1 (ENSMUSG00000030082) #28	Ruvbl1 (ENSMUSG00000030079) #29	Eefsec (ENSMUSG00000033216) #30	Dnajb8 (ENSMUSG00000048206) #31	Gata2 (ENSMUSG00000015053) #33	Rpn1 (ENSMUSG00000030062) #34	Rab7 (ENSMUSG00000079477) #35	H1f10 (ENSMUSG00000044927)	Hmces (ENSMUSG00000030060) #36	Copg1 (ENSMUSG00000030058) #37	Cnbp (ENSMUSG00000030057)
Shrew mouse	MODERN SPECIES	11	Uroc1 (MGP_PahariEiJ_G0022388)	Chst13 (MGP_PahariEiJ_G0022387)	BC048671 (MGP_PahariEiJ_G0022386)	MGP_PahariEiJ_G0022385	MGP_PahariEiJ_G0022384	MGP_PahariEiJ_G0022383	MGP_PahariEiJ_G0022382	MGP_PahariEiJ_G0022381	Vmn1r44 (MGP_PahariEiJ_G0022380)	Vmn1r40 (MGP_PahariEiJ_G0022379)	Txnrd3 (MGP_PahariEiJ_G0022378)	Chchd6 (MGP_PahariEiJ_G0022377)	Plxna1 (MGP_PahariEiJ_G0022376)	MGP_PahariEiJ_G0022375 #20	Tpra1 (MGP_PahariEiJ_G0022374) #21	Mcm2 (MGP_PahariEiJ_G0022373) #22	Podxl2 (MGP_PahariEiJ_G0022372) #23	Abtb1 (MGP_PahariEiJ_G0022371) #25	Mgll (MGP_PahariEiJ_G0022370) #26	Kbtbd12 (MGP_PahariEiJ_G0022369) #27	Sec61a1 (MGP_PahariEiJ_G0022368) #28	Ruvbl1 (MGP_PahariEiJ_G0022367) #29	Eefsec (MGP_PahariEiJ_G0022366) #30	Dnajb8 (MGP_PahariEiJ_G0022365) #31	Gata2 (MGP_PahariEiJ_G0022364) #33	Rpn1 (MGP_PahariEiJ_G0022363) #34	Rab7 (MGP_PahariEiJ_G0022362) #35	MGP_PahariEiJ_G0022361	Hmces (MGP_PahariEiJ_G0022360) #36	Copg1 (MGP_PahariEiJ_G0022359) #37	Cnbp (MGP_PahariEiJ_G0022358)