Gnathostomata	ANCESTRAL SPECIES	5	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896 #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825
Euteleostomi	ANCESTRAL SPECIES	4	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896 #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833
Sarcopterygii	ANCESTRAL SPECIES	13	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23
Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000154696 #32	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a	ENSGT00390000009613.a
Amniota	ANCESTRAL SPECIES	10	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a
Mammalia	ANCESTRAL SPECIES	34	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a	ENSGT00390000009613.a
Theria	ANCESTRAL SPECIES	21	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Eutheria	ANCESTRAL SPECIES	13	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Glires	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161748	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Murinae	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Mus	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b.c.b #28	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.c.b.b.c.a #30	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Mouse	MODERN SPECIES	10	Cyp26c1 (ENSMUSG00000062432) #7	Exoc6 (ENSMUSG00000053799) #8	Hhex (ENSMUSG00000024986) #9	Kif11 (ENSMUSG00000012443) #10	Ide (ENSMUSG00000056999) #11	Marchf5 (ENSMUSG00000023307) #12	Cpeb3 (ENSMUSG00000039652) #13	Btaf1 (ENSMUSG00000040565) #14	Fgfbp3 (ENSMUSG00000047632) #15	Tnks2 (ENSMUSG00000024811) #16	Ppp1r3c (ENSMUSG00000067279) #17	Hectd2 (ENSMUSG00000041180) #18	Pcgf5 (ENSMUSG00000024805) #19	Ankrd1 (ENSMUSG00000024803) #20	Rpp30 (ENSMUSG00000024800) #21	Htr7 (ENSMUSG00000024798) #22	Kif20b (ENSMUSG00000024795) #23	Pank1 (ENSMUSG00000033610) #24	Slc16a12 (ENSMUSG00000009378) #25	Ifit1 (ENSMUSG00000034459) #26	Ifit1bl2 (ENSMUSG00000067297) #27	Ifit3b (ENSMUSG00000062488) #28	Ifit1bl1 (ENSMUSG00000079339) #29	Ifit3 (ENSMUSG00000074896) #30	Ifit2 (ENSMUSG00000045932) #31	Lipa (ENSMUSG00000024781) #32	Ch25h (ENSMUSG00000050370) #33	Fas (ENSMUSG00000024778) #34	Acta2 (ENSMUSG00000035783) #35	Stambpl1 (ENSMUSG00000024776) #36	Ankrd22 (ENSMUSG00000024774) #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.c.b.b.c.a #30	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b.d ##26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Steppe mouse	MODERN SPECIES	3313	Exoc6 (ENSMSIG00000000137) #8	Hhex (ENSMSIG00000024056) #9	Kif11 (ENSMSIG00000024012) #10	Ide (ENSMSIG00000023965) #11	Marchf5 (ENSMSIG00000023937) #12	Cpeb3 (ENSMSIG00000023886) #13	Btaf1 (ENSMSIG00000023779) #14	Fgfbp3 (ENSMSIG00000023772) #15	Tnks2 (ENSMSIG00000023604) #16	Ppp1r3c (ENSMSIG00000023597) #17	Hectd2 (ENSMSIG00000023532) #18	ENSMSIG00000023518	Pcgf5 (ENSMSIG00000023434) #19	Ankrd1 (ENSMSIG00000023413) #20	Rpp30 (ENSMSIG00000023385) #21	Htr7 (ENSMSIG00000023360) #22	ENSMSIG00000023356
spretus	MODERN SPECIES	10	Cyp26c1 (MGP_SPRETEiJ_G0023835) #7	Exoc6 (MGP_SPRETEiJ_G0023834) #8	Hhex (MGP_SPRETEiJ_G0023833) #9	Kif11 (MGP_SPRETEiJ_G0023832) #10	Ide (MGP_SPRETEiJ_G0023831) #11	Marchf5 (MGP_SPRETEiJ_G0023830) #12	Cpeb3 (MGP_SPRETEiJ_G0023829) #13	Btaf1 (MGP_SPRETEiJ_G0023828) #14	Fgfbp3 (MGP_SPRETEiJ_G0023827) #15	Tnks2 (MGP_SPRETEiJ_G0023826) #16	Ppp1r3c (MGP_SPRETEiJ_G0023825) #17	Hectd2 (MGP_SPRETEiJ_G0023824) #18	Pcgf5 (MGP_SPRETEiJ_G0023823) #19	Ankrd1 (MGP_SPRETEiJ_G0023822) #20	Rpp30 (MGP_SPRETEiJ_G0023821) #21	Htr7 (MGP_SPRETEiJ_G0023820) #22	Kif20b (MGP_SPRETEiJ_G0023819) #23	Pank1 (MGP_SPRETEiJ_G0023818) #24	Slc16a12 (MGP_SPRETEiJ_G0023817) #25	Ifit1 (MGP_SPRETEiJ_G0023816) #26	MGP_SPRETEiJ_G0023815 #30	MGP_SPRETEiJ_G0023814 #30	Ifit1bl1 (MGP_SPRETEiJ_G0023813) #29	Ifit2 (MGP_SPRETEiJ_G0023812) #31	Lipa (MGP_SPRETEiJ_G0023811) #32	Ch25h (MGP_SPRETEiJ_G0023810) #33	Fas (MGP_SPRETEiJ_G0023809) #34	Acta2 (MGP_SPRETEiJ_G0023808) #35	Stambpl1 (MGP_SPRETEiJ_G0023807) #36	Ankrd22 (MGP_SPRETEiJ_G0023806) #37	Lipm (MGP_SPRETEiJ_G0023805)
Ryukyu mouse	MODERN SPECIES	10	Exoc6 (MGP_CAROLIEiJ_G0022916) #8	Hhex (MGP_CAROLIEiJ_G0022915) #9	MGP_CAROLIEiJ_G0022914	MGP_CAROLIEiJ_G0022913	Ide (MGP_CAROLIEiJ_G0022912) #11	Marchf5 (MGP_CAROLIEiJ_G0022911) #12	Cpeb3 (MGP_CAROLIEiJ_G0022910) #13	Btaf1 (MGP_CAROLIEiJ_G0022909) #14	Fgfbp3 (MGP_CAROLIEiJ_G0022908) #15	Tnks2 (MGP_CAROLIEiJ_G0022907) #16	Ppp1r3c (MGP_CAROLIEiJ_G0022906) #17	Hectd2 (MGP_CAROLIEiJ_G0022905) #18	Pcgf5 (MGP_CAROLIEiJ_G0022904) #19	Ankrd1 (MGP_CAROLIEiJ_G0022903) #20	Rpp30 (MGP_CAROLIEiJ_G0022902) #21	Htr7 (MGP_CAROLIEiJ_G0022901) #22	Kif20b (MGP_CAROLIEiJ_G0022900) #23	Pank1 (MGP_CAROLIEiJ_G0022899) #24	Slc16a12 (MGP_CAROLIEiJ_G0022898) #25	Ifit1 (MGP_CAROLIEiJ_G0022897) #26	MGP_CAROLIEiJ_G0022896 #28	MGP_CAROLIEiJ_G0022895 #28	MGP_CAROLIEiJ_G0022894 #29	MGP_CAROLIEiJ_G0022893 #29	Ifit2 (MGP_CAROLIEiJ_G0022892) #31	Lipa (MGP_CAROLIEiJ_G0022891) #32	Ch25h (MGP_CAROLIEiJ_G0022890) #33	Fas (MGP_CAROLIEiJ_G0022889) #34	Acta2 (MGP_CAROLIEiJ_G0022888) #35	Stambpl1 (MGP_CAROLIEiJ_G0022887) #36	Ankrd22 (MGP_CAROLIEiJ_G0022886) #37
Shrew mouse	MODERN SPECIES		Cyp26a1 (MGP_PahariEiJ_G0014411) ##7	Cyp26c1 (MGP_PahariEiJ_G0014410) #7	Exoc6 (MGP_PahariEiJ_G0014409) #8	Hhex (MGP_PahariEiJ_G0014408) #9	Ide (MGP_PahariEiJ_G0014407) #11	Marchf5 (MGP_PahariEiJ_G0014406) #12	Cpeb3 (MGP_PahariEiJ_G0014405) #13	Btaf1 (MGP_PahariEiJ_G0014404) #14	Fgfbp3 (MGP_PahariEiJ_G0014403) #15	MGP_PahariEiJ_G0014402 #16	Ppp1r3c (MGP_PahariEiJ_G0014401) #17	Hectd2 (MGP_PahariEiJ_G0014400) #18	Pcgf5 (MGP_PahariEiJ_G0014399) #19	Ankrd1 (MGP_PahariEiJ_G0014398) #20	Rpp30 (MGP_PahariEiJ_G0014397) #21	Htr7 (MGP_PahariEiJ_G0014396) #22	Kif20b (MGP_PahariEiJ_G0014395) #23	Pank1 (MGP_PahariEiJ_G0014394) #24	Slc16a12 (MGP_PahariEiJ_G0014393) #25	Ifit1 (MGP_PahariEiJ_G0014392) #26	MGP_PahariEiJ_G0014391 #27	MGP_PahariEiJ_G0014390 #27	MGP_PahariEiJ_G0014389 #28	MGP_PahariEiJ_G0014388 #28	Ifit2 (MGP_PahariEiJ_G0014387) #31	Lipa (MGP_PahariEiJ_G0014386) #32	Ch25h (MGP_PahariEiJ_G0014385) #33	MGP_PahariEiJ_G0014384 #34	Acta2 (MGP_PahariEiJ_G0014383) #35	MGP_PahariEiJ_G0014382 #36	Ankrd22 (MGP_PahariEiJ_G0014381) #37
Rat	MODERN SPECIES		Cyp26c1 (ENSRNOG00000030698) #7	Exoc6 (ENSRNOG00000036601) #8	Hhex (ENSRNOG00000016595) #9	Kif11 (ENSRNOG00000056069) #10	Ide (ENSRNOG00000016833) #11	Marchf5 (ENSRNOG00000017396) #12	Cpeb3 (ENSRNOG00000020689) #13	Btaf1 (ENSRNOG00000017938) #14	Fgfbp3 (ENSRNOG00000022796) #15	Tnks2 (ENSRNOG00000052664) #16	Ppp1r3c (ENSRNOG00000018494) #17	Hectd2 (ENSRNOG00000056753) #18	Pcgf5 (ENSRNOG00000018532) #19	Ankrd1 (ENSRNOG00000018598) #20	Rpp30 (ENSRNOG00000018718) #21	Htr7 (ENSRNOG00000018827) #22	ENSRNOG00000065783	ENSRNOG00000067512	Kif20b (ENSRNOG00000018929) #23	Pank1 (ENSRNOG00000018944) #24	Slc16a12 (ENSRNOG00000021916) #25	Ifit1 (ENSRNOG00000019050) #26	Ifit1bl (ENSRNOG00000036603) #27	Ifit3 (ENSRNOG00000022839) #28	Ifit2 (ENSRNOG00000036604) #31	Lipa (ENSRNOG00000019077) #32	Ch25h (ENSRNOG00000019141) #33	Fas (ENSRNOG00000019142) #34	Acta2 (ENSRNOG00000058039) #35	Stambpl1 (ENSRNOG00000050224) #36	Ankrd22 (ENSRNOG00000019190) #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Golden Hamster	MODERN SPECIES	617	Exoc6 (ENSMAUG00000021958) #8	Hhex (ENSMAUG00000021875) #9	Kif11 (ENSMAUG00000001346) #10	Ide (ENSMAUG00000001331) #11	ENSMAUG00000004621	ENSMAUG00000001811 #12	Cpeb3 (ENSMAUG00000002789) #13	Btaf1 (ENSMAUG00000003977) #14	Fgfbp3 (ENSMAUG00000003881) #15	Tnks2 (ENSMAUG00000002675) #16	Ppp1r3c (ENSMAUG00000021890) #17	Hectd2 (ENSMAUG00000005723) #18	Pcgf5 (ENSMAUG00000006268) #19	Ankrd1 (ENSMAUG00000004256) #20	Rpp30 (ENSMAUG00000008797) #21	Htr7 (ENSMAUG00000008537) #22	Kif20b (ENSMAUG00000003707) #23	Pank1 (ENSMAUG00000004211) #24	Slc16a12 (ENSMAUG00000005932) #25	ENSMAUG00000006010	ENSMAUG00000004543 #27	ENSMAUG00000004294 #28	Ifit2 (ENSMAUG00000004507) #31	Lipa (ENSMAUG00000004120) #32	Ch25h (ENSMAUG00000001529) #33	Fas (ENSMAUG00000008875) #34	Acta2 (ENSMAUG00000007124) #35	ENSMAUG00000004326 #36	Ankrd22 (ENSMAUG00000005961) #37	Lipm (ENSMAUG00000006798)	Lipn (ENSMAUG00000009129)
Chinese hamster chok1gshd	MODERN SPECIES	299	ENSCGRG00001017101	ENSCGRG00001015403	Rnls (ENSCGRG00001012669)	ENSCGRG00001011824	Atad1 (ENSCGRG00001009686)	Papss2 (ENSCGRG00001019072)	Minpp1 (ENSCGRG00001016154)	Fgfbp3 (ENSCGRG00001015712) #15	Tnks2 (ENSCGRG00001008529) #16	ENSCGRG00001013440	Ppp1r3c (ENSCGRG00001019196) #17	Hectd2 (ENSCGRG00001015774) #18	Pcgf5 (ENSCGRG00001010288) #19	Ankrd1 (ENSCGRG00001019357) #20	ENSCGRG00001017068 #21	Htr7 (ENSCGRG00001006968) #22	Kif20b (ENSCGRG00001019586) #23	Pank1 (ENSCGRG00001016193) #24	Slc16a12 (ENSCGRG00001013278) #25	ENSCGRG00001012991	Ifit1 (ENSCGRG00001009709) #26	Ifit2 (ENSCGRG00001008403) #31	ENSCGRG00001012858 #28	ENSCGRG00001018062 #27	Lipa (ENSCGRG00001017679) #32	Ch25h (ENSCGRG00001014081) #33	Fas (ENSCGRG00001014763) #34	Acta2 (ENSCGRG00001010722) #35	Stambpl1 (ENSCGRG00001009749) #36	Ankrd22 (ENSCGRG00001005731) #37	Lipm (ENSCGRG00001001485)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Prairie vole	MODERN SPECIES	16	Cyp26c1 (ENSMOCG00000010364) #7	Exoc6 (ENSMOCG00000006423) #8	Hhex (ENSMOCG00000002877) #9	Kif11 (ENSMOCG00000018770) #10	ENSMOCG00000018624	Ide (ENSMOCG00000011855) #11	Marchf5 (ENSMOCG00000004858) #12	Cpeb3 (ENSMOCG00000016486) #13	Btaf1 (ENSMOCG00000011495) #14	Tnks2 (ENSMOCG00000014956) #16	Ppp1r3c (ENSMOCG00000007419) #17	Hectd2 (ENSMOCG00000018042) #18	Pcgf5 (ENSMOCG00000010451) #19	Ankrd1 (ENSMOCG00000006428) #20	Rpp30 (ENSMOCG00000016872) #21	Htr7 (ENSMOCG00000008428) #22	Kif20b (ENSMOCG00000001261) #23	ENSMOCG00000022098	ENSMOCG00000020477 #24	Pank1 (ENSMOCG00000004723) #24	Slc16a12 (ENSMOCG00000002695) #25	ENSMOCG00000004601 #26	ENSMOCG00000021284 #26	ENSMOCG00000011659 #28	Ifit2 (ENSMOCG00000016497) #31	Lipa (ENSMOCG00000018201) #32	Ch25h (ENSMOCG00000010445) #33	Fas (ENSMOCG00000000870) #34	Acta2 (ENSMOCG00000022350) #35	Stambpl1 (ENSMOCG00000003028) #36	Ankrd22 (ENSMOCG00000022828) #37
Northern American deer mouse	MODERN SPECIES		Cyp26a1 (ENSPEMG00000013143) ##7	Cyp26c1 (ENSPEMG00000014293) #7	Exoc6 (ENSPEMG00000017626) #8	Hhex (ENSPEMG00000011602) #9	Kif11 (ENSPEMG00000017786) #10	Ide (ENSPEMG00000018035) #11	Marchf5 (ENSPEMG00000015038) #12	Cpeb3 (ENSPEMG00000008448) #13	Btaf1 (ENSPEMG00000005174) #14	Tnks2 (ENSPEMG00000002166) #16	Ppp1r3c (ENSPEMG00000025122) #17	Hectd2 (ENSPEMG00000008243) #18	Pcgf5 (ENSPEMG00000008664) #19	Ankrd1 (ENSPEMG00000013995) #20	Rpp30 (ENSPEMG00000001948) #21	Htr7 (ENSPEMG00000011829) #22	ENSPEMG00000029363 #26	ENSPEMG00000024463 #26	ENSPEMG00000024487 #26	ENSPEMG00000000359 #26	ENSPEMG00000014943 #27	ENSPEMG00000029751 #28	Ifit2 (ENSPEMG00000008813) #31	Lipa (ENSPEMG00000014276) #32	Ch25h (ENSPEMG00000014530) #33	Fas (ENSPEMG00000000158) #34	Acta2 (ENSPEMG00000000128) #35	Stambpl1 (ENSPEMG00000005840) #36	Ankrd22 (ENSPEMG00000017012) #37	Lipm (ENSPEMG00000020501)	Lipn (ENSPEMG00000018314)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1499	Cyp26a1 (ENSNGAG00000020319) ##7	Cyp26c1 (ENSNGAG00000006454) #7	Exoc6 (ENSNGAG00000001199) #8	ENSNGAG00000017053	Kif11 (ENSNGAG00000018093) #10	Ide (ENSNGAG00000018859) #11	Marchf5 (ENSNGAG00000011481) #12	Cpeb3 (ENSNGAG00000015621) #13	Btaf1 (ENSNGAG00000000366) #14	Tnks2 (ENSNGAG00000018372) #16	Ppp1r3c (ENSNGAG00000014792) #17	Hectd2 (ENSNGAG00000018245) #18	ENSNGAG00000015961 #19	Ankrd1 (ENSNGAG00000012773) #20	ENSNGAG00000012018 #21	Htr7 (ENSNGAG00000010658) #22	ENSNGAG00000000031	Kif20b (ENSNGAG00000014138) #23	ENSNGAG00000013645	Pank1 (ENSNGAG00000003177) #24
Lesser Egyptian jerboa	MODERN SPECIES	50	ENSJJAG00000022605	ENSJJAG00000000311	Kif11 (ENSJJAG00000016860) #10	Ide (ENSJJAG00000019815) #11	ENSJJAG00000023593 #12	Cpeb3 (ENSJJAG00000009135) #13	Btaf1 (ENSJJAG00000016636) #14	ENSJJAG00000010510	Tnks2 (ENSJJAG00000024121) #16	Ppp1r3c (ENSJJAG00000023747) #17	Hectd2 (ENSJJAG00000002659) #18	Pcgf5 (ENSJJAG00000019027) #19	ENSJJAG00000012541	Ankrd1 (ENSJJAG00000005637) #20	Rpp30 (ENSJJAG00000020041) #21	Htr7 (ENSJJAG00000017934) #22	ENSJJAG00000013447	ENSJJAG00000022465	Kif20b (ENSJJAG00000013969) #23	ENSJJAG00000018494	Pank1 (ENSJJAG00000023788) #24	Slc16a12 (ENSJJAG00000013860) #25	ENSJJAG00000024328 #26	Ifit2 (ENSJJAG00000019071) #31	ENSJJAG00000010974	Lipa (ENSJJAG00000014976) #32	Ch25h (ENSJJAG00000013038) #33	ENSJJAG00000012674 #34	Acta2 (ENSJJAG00000012960) #35	ENSJJAG00000010334 #36	Ankrd22 (ENSJJAG00000022505) #37
Kangaroo rat	MODERN SPECIES	505	Cyp26c1 (ENSDORG00000006737) #7	Exoc6 (ENSDORG00000006736) #8	ENSDORG00000028544	Kif11 (ENSDORG00000008541) #10	Ide (ENSDORG00000013205) #11	Marchf5 (ENSDORG00000027150) #12	Cpeb3 (ENSDORG00000028940) #13	Btaf1 (ENSDORG00000000104) #14	Fgfbp3 (ENSDORG00000025665) #15	Tnks2 (ENSDORG00000015121) #16	ENSDORG00000008666 #17	Hectd2 (ENSDORG00000002137) #18	Pcgf5 (ENSDORG00000027987) #19	Ankrd1 (ENSDORG00000015336) #20	Rpp30 (ENSDORG00000015333) #21	Htr7 (ENSDORG00000002925) #22
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.t #26	ENSGT00950000182946.d.s #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153661.b.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b.l
Marmotini	ANCESTRAL SPECIES	16	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.t #26	ENSGT00950000182946.d.s #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153661.b.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b.l
Marmotini_b	ANCESTRAL SPECIES	136	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000160856	ENSGT00390000017405	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22
Arctic ground squirrel	MODERN SPECIES	184	EXOC6 (ENSUPAG00010011855) #8	ENSUPAG00010011848 #9	KIF11 (ENSUPAG00010011823) #10	IDE (ENSUPAG00010011780) #11	MARCHF5 (ENSUPAG00010011762) #12	CPEB3 (ENSUPAG00010011729) #13	BTAF1 (ENSUPAG00010011669) #14	FGFBP3 (ENSUPAG00010011663) #15	TNKS2 (ENSUPAG00010011590) #16	PPP1R3C (ENSUPAG00010011587) #17	HECTD2 (ENSUPAG00010011490) #18	PCGF5 (ENSUPAG00010011353) #19	ENSUPAG00010011348	ANKRD1 (ENSUPAG00010011335) #20	RPP30 (ENSUPAG00010011317) #21	HTR7 (ENSUPAG00010011303) #22
Squirrel	MODERN SPECIES	201	ENSSTOG00000030502	HHEX (ENSSTOG00000006255)	KIF11 (ENSSTOG00000006209) #10	ENSSTOG00000024075	IDE (ENSSTOG00000020385) #11	ENSSTOG00000025613	MARCHF5 (ENSSTOG00000005998) #12	CPEB3 (ENSSTOG00000028061) #13	BTAF1 (ENSSTOG00000008677) #14	TNKS2 (ENSSTOG00000002349) #16	PPP1R3C (ENSSTOG00000025781) #17	HECTD2 (ENSSTOG00000009022) #18	PCGF5 (ENSSTOG00000009179) #19	ANKRD1 (ENSSTOG00000009160) #20	RPP30 (ENSSTOG00000027002) #21	HTR7 (ENSSTOG00000028466) #22	ENSSTOG00000033664	ENSSTOG00000027065	KIF20B (ENSSTOG00000012892) #23	PANK1 (ENSSTOG00000022951) #24	SLC16A12 (ENSSTOG00000009614) #25	IFIT5 (ENSSTOG00000028876) ##26	ENSSTOG00000024733 #26	ENSSTOG00000030296 #26	ENSSTOG00000031302 #26	IFIT3 (ENSSTOG00000013100) #28	IFIT2 (ENSSTOG00000022564) #31	ENSSTOG00000026437 #31	LIPA (ENSSTOG00000023070) #32	CH25H (ENSSTOG00000013092) #33	GPRIN2 (ENSSTOG00000005918)
Alpin marmot	MODERN SPECIES	66	EXOC6 (ENSMMMG00000014609) #8	HHEX (ENSMMMG00000014588)	KIF11 (ENSMMMG00000014562) #10	IDE (ENSMMMG00000012810) #11	ENSMMMG00000012791	MARCHF5 (ENSMMMG00000012751) #12	CPEB3 (ENSMMMG00000012583) #13	BTAF1 (ENSMMMG00000012536) #14	TNKS2 (ENSMMMG00000012490) #16	PPP1R3C (ENSMMMG00000012486) #17	HECTD2 (ENSMMMG00000012452) #18	PCGF5 (ENSMMMG00000012341) #19	ENSMMMG00000012338	ANKRD1 (ENSMMMG00000012324) #20	RPP30 (ENSMMMG00000012309) #21	HTR7 (ENSMMMG00000012295) #22	ENSMMMG00000012292	ENSMMMG00000012290	ENSMMMG00000012283	KIF20B (ENSMMMG00000012202) #23	PANK1 (ENSMMMG00000012185) #24	SLC16A12 (ENSMMMG00000012174) #25	IFIT5 (ENSMMMG00000012170) ##26	IFIT1B (ENSMMMG00000012141) #26	IFIT3 (ENSMMMG00000012138) #28	IFIT2 (ENSMMMG00000012130) #31	ENSMMMG00000012079 #31	LIPA (ENSMMMG00000012074) #32	CH25H (ENSMMMG00000012067) #33	ENSMMMG00000012060	GPRIN2 (ENSMMMG00000012057)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Hystricomorpha_b	ANCESTRAL SPECIES	72	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.q #26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Long-tailed chinchilla	MODERN SPECIES	132	CYP26C1 (ENSCLAG00000010270) #7	EXOC6 (ENSCLAG00000008310) #8	HHEX (ENSCLAG00000012119)	KIF11 (ENSCLAG00000013622) #10	IDE (ENSCLAG00000013467) #11	MARCHF5 (ENSCLAG00000013192) #12	CPEB3 (ENSCLAG00000011817) #13	BTAF1 (ENSCLAG00000012888) #14	TNKS2 (ENSCLAG00000013558) #16	ENSCLAG00000010844	PPP1R3C (ENSCLAG00000012433) #17	ENSCLAG00000012695 #18	PCGF5 (ENSCLAG00000013777) #19	ANKRD1 (ENSCLAG00000009887) #20	RPP30 (ENSCLAG00000008595) #21	HTR7 (ENSCLAG00000011360) #22	KIF20B (ENSCLAG00000008733) #23	PANK1 (ENSCLAG00000009547) #24	SLC16A12 (ENSCLAG00000008868) #25	ENSCLAG00000009282 #26	ENSCLAG00000008375 #26	IFIT2 (ENSCLAG00000009587) #31	LIPA (ENSCLAG00000015247) #32	CH25H (ENSCLAG00000011191) #33	FAS (ENSCLAG00000010233) #34	ACTA2 (ENSCLAG00000011268) #35	STAMBPL1 (ENSCLAG00000012073) #36	ANKRD22 (ENSCLAG00000013284) #37	LIPM (ENSCLAG00000009261)	LIPN (ENSCLAG00000012833)	LIPK (ENSCLAG00000009773)
Degu	MODERN SPECIES	87	KIF11 (ENSODEG00000006812) #10	IDE (ENSODEG00000005398) #11	ENSODEG00000005936	MARCHF5 (ENSODEG00000004219) #12	ENSODEG00000004464	CPEB3 (ENSODEG00000004591) #13	ENSODEG00000005031	BTAF1 (ENSODEG00000005172) #14	TNKS2 (ENSODEG00000004816) #16	PPP1R3C (ENSODEG00000006013) #17	HECTD2 (ENSODEG00000004980) #18	ENSODEG00000005047	PCGF5 (ENSODEG00000004787) #19	ANKRD1 (ENSODEG00000005129) #20	ENSODEG00000004530 #21	HTR7 (ENSODEG00000004910) #22	ENSODEG00000019106	KIF20B (ENSODEG00000005304) #23	ENSODEG00000004557	ENSODEG00000019069	PANK1 (ENSODEG00000006515) #24	SLC16A12 (ENSODEG00000006954) #25	ENSODEG00000006311	LIPA (ENSODEG00000005659) #32	ENSODEG00000005184	ACTA2 (ENSODEG00000005541) #35	ENSODEG00000005966 #36	ANKRD22 (ENSODEG00000006197) #37	LIPM (ENSODEG00000004722)	LIPN (ENSODEG00000005009)	LIPK (ENSODEG00000004941)
Guinea pig	MODERN SPECIES	137	ENSCPOG00000014755	SDE2 (ENSCPOG00000014756)	ENSCPOG00000025231	ENSCPOG00000039202	ACBD3 (ENSCPOG00000007184)	LIN9 (ENSCPOG00000015642)	PARP1 (ENSCPOG00000015643)	STUM (ENSCPOG00000031019)	ITPKB (ENSCPOG00000013483)	RD3 (ENSCPOG00000022572)	PPP1R3C (ENSCPOG00000038237) #17	HECTD2 (ENSCPOG00000008922) #18	PCGF5 (ENSCPOG00000013156) #19	ANKRD1 (ENSCPOG00000002565) #20	RPP30 (ENSCPOG00000033174) #21	HTR7 (ENSCPOG00000007482) #22
Naked mole-rat female	MODERN SPECIES	4	KIF11 (ENSHGLG00000014395) #10	IDE (ENSHGLG00000012665) #11	MARCH5 (ENSHGLG00000044946) #12	CPEB3 (ENSHGLG00000014022) #13	BTAF1 (ENSHGLG00000010425) #14	FGFBP3 (ENSHGLG00000046261) #15	TNKS2 (ENSHGLG00000018423) #16	PPP1R3C (ENSHGLG00000045942) #17	ENSHGLG00000033981	HECTD2 (ENSHGLG00000013810) #18	PCGF5 (ENSHGLG00000016348) #19	ENSHGLG00000047830	ENSHGLG00000016315	ENSHGLG00000016279 #20	ENSHGLG00000013072 #21	ENSHGLG00000011172 #22	ENSHGLG00000037303	ENSHGLG00000041517	ENSHGLG00000012239	ENSHGLG00000020968	ENSHGLG00000010782 #23	ENSHGLG00000043314	PANK1 (ENSHGLG00000010521) #24	SLC16A12 (ENSHGLG00000007331) #25	IFIT5 (ENSHGLG00000043608) ##26	ENSHGLG00000012010 #26	ENSHGLG00000011005 #26	IFIT3 (ENSHGLG00000049612) #28	ENSHGLG00000039997	IFIT2 (ENSHGLG00000009880) #31	ENSHGLG00000049191 #32
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Rabbit	MODERN SPECIES	9	CYP26C1 (ENSOCUG00000000176) #7	EXOC6 (ENSOCUG00000000174) #8	ENSOCUG00000016719 #9	KIF11 (ENSOCUG00000016706) #10	ENSOCUG00000037602	IDE (ENSOCUG00000002827) #11	MARCHF5 (ENSOCUG00000005719) #12	CPEB3 (ENSOCUG00000010454) #13	BTAF1 (ENSOCUG00000010433) #14	TNKS2 (ENSOCUG00000012010) #16	PPP1R3C (ENSOCUG00000015051) #17	HECTD2 (ENSOCUG00000015035) #18	PCGF5 (ENSOCUG00000012993) #19	ANKRD1 (ENSOCUG00000006901) #20	RPP30 (ENSOCUG00000006896) #21	HTR7 (ENSOCUG00000016103) #22	ENSOCUG00000030702	ENSOCUG00000025563	KIF20B (ENSOCUG00000002468) #23	ENSOCUG00000031325	PANK1 (ENSOCUG00000002780) #24	SLC16A12 (ENSOCUG00000014498) #25	ENSOCUG00000005445 #26	IFIT3 (ENSOCUG00000032132) #28	IFIT2 (ENSOCUG00000024939) #31	LIPA (ENSOCUG00000001553) #32	CH25H (ENSOCUG00000000545) #33	ENSOCUG00000008202 #34	ACTA2 (ENSOCUG00000008193) #35	STAMBPL1 (ENSOCUG00000008174) #36	ANKRD22 (ENSOCUG00000004617) #37
Pika	MODERN SPECIES	2097															ENSOPRG00000002071 #20	ENSOPRG00000002036 #22
Tree shrew	MODERN SPECIES	7992														ANKRD1 (ENSTBEG00000010862) #20	RPP30 (ENSTBEG00000010734) #21	HTR7 (ENSTBEG00000010431) #22
Primates	ANCESTRAL SPECIES	16	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p.c.a #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p.d #26	ENSGT00950000182946.d.p.c.a #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Greater bamboo lemur	MODERN SPECIES	406	HHEX (ENSPSMG00000012502)	KIF11 (ENSPSMG00000012572) #10	IDE (ENSPSMG00000012636) #11	MARCHF5 (ENSPSMG00000012654) #12	CPEB3 (ENSPSMG00000012681) #13	BTAF1 (ENSPSMG00000012804) #14	FGFBP3 (ENSPSMG00000012861) #15	TNKS2 (ENSPSMG00000012929) #16	PPP1R3C (ENSPSMG00000012959) #17	HECTD2 (ENSPSMG00000013062) #18	ENSPSMG00000013168	PCGF5 (ENSPSMG00000013196) #19	ENSPSMG00000013209	ANKRD1 (ENSPSMG00000013220) #20	RPP30 (ENSPSMG00000013253) #21	HTR7 (ENSPSMG00000013265) #22
Coquerels sifaka	MODERN SPECIES	787	ENSPCOG00000018518	EXOC6 (ENSPCOG00000024612) #8	HHEX (ENSPCOG00000008674)	KIF11 (ENSPCOG00000018984) #10	IDE (ENSPCOG00000017623) #11	ENSPCOG00000026390	MARCHF5 (ENSPCOG00000022205) #12	CPEB3 (ENSPCOG00000023690) #13	BTAF1 (ENSPCOG00000027269) #14	TNKS2 (ENSPCOG00000024373) #16	PPP1R3C (ENSPCOG00000022561) #17	HECTD2 (ENSPCOG00000020697) #18	PCGF5 (ENSPCOG00000025053) #19	ANKRD1 (ENSPCOG00000024392) #20	RPP30 (ENSPCOG00000017865) #21	HTR7 (ENSPCOG00000022548) #22	KIF20B (ENSPCOG00000011378) #23	PANK1 (ENSPCOG00000025267) #24	SLC16A12 (ENSPCOG00000014212) #25	IFIT5 (ENSPCOG00000016774) ##26	IFIT1 (ENSPCOG00000000411) #26	IFIT3 (ENSPCOG00000000039) #28	IFIT2 (ENSPCOG00000025792) #31	ENSPCOG00000007526	ENSPCOG00000015339	LIPA (ENSPCOG00000015519) #32	ENSPCOG00000013528	FAS (ENSPCOG00000004108) #34	ACTA2 (ENSPCOG00000004723) #35	ENSPCOG00000015760	STAMBPL1 (ENSPCOG00000015340) #36
Mouse lemur	MODERN SPECIES	6	CYP26C1 (ENSMICG00000013120) #7	EXOC6 (ENSMICG00000013082) #8	HHEX (ENSMICG00000034608)	KIF11 (ENSMICG00000046515) #10	IDE (ENSMICG00000012894) #11	MARCHF5 (ENSMICG00000017843) #12	CPEB3 (ENSMICG00000026866) #13	BTAF1 (ENSMICG00000017841) #14	ENSMICG00000043586	TNKS2 (ENSMICG00000014154) #16	PPP1R3C (ENSMICG00000043594) #17	HECTD2 (ENSMICG00000012041) #18	ENSMICG00000012035 #19	ANKRD1 (ENSMICG00000012033) #20	RPP30 (ENSMICG00000012019) #21	HTR7 (ENSMICG00000011996) #22	KIF20B (ENSMICG00000013804) #23	ENSMICG00000030352	PANK1 (ENSMICG00000016832) #24	SLC16A12 (ENSMICG00000016823) #25	IFIT5 (ENSMICG00000047990) ##26	ENSMICG00000032446 #26	ENSMICG00000033126 #26	IFIT3 (ENSMICG00000014624) #28	IFIT2 (ENSMICG00000036288) #31	LIPA (ENSMICG00000034453) #32	ENSMICG00000032183	FAS (ENSMICG00000006549) #34	ACTA2 (ENSMICG00000006543) #35	STAMBPL1 (ENSMICG00000006526) #36	ANKRD22 (ENSMICG00000006521) #37
Bushbaby	MODERN SPECIES	123	EXOC6 (ENSOGAG00000016987) #8	HHEX (ENSOGAG00000015201)	ENSOGAG00000015192 #10	IDE (ENSOGAG00000015180) #11	MARCHF5 (ENSOGAG00000015175) #12	CPEB3 (ENSOGAG00000002002) #13	BTAF1 (ENSOGAG00000001995) #14	FGFBP3 (ENSOGAG00000031866) #15	TNKS2 (ENSOGAG00000001988) #16	PPP1R3C (ENSOGAG00000015739) #17	HECTD2 (ENSOGAG00000006030) #18	PCGF5 (ENSOGAG00000001187) #19	ENSOGAG00000032646	ANKRD1 (ENSOGAG00000013966) #20	RPP30 (ENSOGAG00000013963) #21	HTR7 (ENSOGAG00000013960) #22	ENSOGAG00000026403	ENSOGAG00000030836	KIF20B (ENSOGAG00000008980) #23	ENSOGAG00000015716 #24	SLC16A12 (ENSOGAG00000009661) #25	IFIT5 (ENSOGAG00000009660) ##26	IFIT1 (ENSOGAG00000031058) #26	IFIT3 (ENSOGAG00000002215) #28	IFIT2 (ENSOGAG00000027677) #31	ENSOGAG00000026881	LIPA (ENSOGAG00000002214) #32	CH25H (ENSOGAG00000002213) #33	FAS (ENSOGAG00000006440) #34	ACTA2 (ENSOGAG00000028125) #35	STAMBPL1 (ENSOGAG00000006433) #36
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000161748.c	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000153167.B.j	ENSGT00940000161748.c	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000153167.B.j	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Capuchin	MODERN SPECIES	705															ENSCCAG00000022184	HTR7 (ENSCCAG00000018538) #22
Bolivian squirrel monkey	MODERN SPECIES	47	HHEX (ENSSBOG00000029168)	ENSSBOG00000032639	KIF11 (ENSSBOG00000034950) #10	IDE (ENSSBOG00000022039) #11	MARCHF5 (ENSSBOG00000033560) #12	CPEB3 (ENSSBOG00000035843) #13	BTAF1 (ENSSBOG00000023863) #14	ENSSBOG00000026404	ENSSBOG00000014089	TNKS2 (ENSSBOG00000022355) #16	PPP1R3C (ENSSBOG00000020041) #17	HECTD2 (ENSSBOG00000021741) #18	PCGF5 (ENSSBOG00000019845) #19	ANKRD1 (ENSSBOG00000021694) #20	RPP30 (ENSSBOG00000025405) #21	HTR7 (ENSSBOG00000029751) #22	ENSSBOG00000021832	ENSSBOG00000033637	KIF20B (ENSSBOG00000022329) #23	PANK1 (ENSSBOG00000020171) #24	SLC16A12 (ENSSBOG00000031607) #25	IFIT5 (ENSSBOG00000028582) ##26	IFIT1 (ENSSBOG00000033954) #26	IFIT1B (ENSSBOG00000024690) #26	IFIT3 (ENSSBOG00000029768) #28	IFIT2 (ENSSBOG00000035689) #31	LIPA (ENSSBOG00000022968) #32	FAS (ENSSBOG00000033506) #34	ACTA2 (ENSSBOG00000021976) #35	STAMBPL1 (ENSSBOG00000031643) #36	ANKRD22 (ENSSBOG00000028251) #37
Marmoset	MODERN SPECIES	3	ENSCJAG00000008627	KIF11 (ENSCJAG00000008594) #10	IDE (ENSCJAG00000008515) #11	MARCHF5 (ENSCJAG00000008509) #12	ENSCJAG00000075826	CPEB3 (ENSCJAG00000008495) #13	BTAF1 (ENSCJAG00000008359) #14	ENSCJAG00000074077	TNKS2 (ENSCJAG00000008230) #16	PPP1R3C (ENSCJAG00000075367) #17	HECTD2 (ENSCJAG00000010937) #18	ENSCJAG00000070442	PCGF5 (ENSCJAG00000011001) #19	ANKRD1 (ENSCJAG00000011021) #20	RPP30 (ENSCJAG00000011045) #21	HTR7 (ENSCJAG00000011075) #22	ENSCJAG00000085126	KIF20B (ENSCJAG00000011110) #23	PANK1 (ENSCJAG00000011177) #24	SLC16A12 (ENSCJAG00000039416) #25	IFIT5 (ENSCJAG00000011216) ##26	ENSCJAG00000069816	ENSCJAG00000035375	IFIT1 (ENSCJAG00000005746) #26	IFIT3 (ENSCJAG00000005737) #28	LIPA (ENSCJAG00000005689) #32	FAS (ENSCJAG00000005615) #34	ACTA2 (ENSCJAG00000005576) #35	STAMBPL1 (ENSCJAG00000005484) #36	ANKRD22 (ENSCJAG00000052310) #37	LIPM (ENSCJAG00000005454)
Mas night monkey	MODERN SPECIES	1344	HHEX (ENSANAG00000022409)	ENSANAG00000032328	KIF11 (ENSANAG00000032354) #10	IDE (ENSANAG00000031652) #11	ENSANAG00000031609	MARCHF5 (ENSANAG00000030069) #12	CPEB3 (ENSANAG00000037406) #13	ENSANAG00000027568	BTAF1 (ENSANAG00000032672) #14	TNKS2 (ENSANAG00000037727) #16	PPP1R3C (ENSANAG00000034751) #17	HECTD2 (ENSANAG00000023085) #18	PCGF5 (ENSANAG00000032781) #19	ANKRD1 (ENSANAG00000031001) #20	RPP30 (ENSANAG00000009439) #21	HTR7 (ENSANAG00000037604) #22	ENSANAG00000036783	ENSANAG00000019434	ENSANAG00000036622	ENSANAG00000019647	KIF20B (ENSANAG00000024962) #23	PANK1 (ENSANAG00000027836) #24	SLC16A12 (ENSANAG00000035309) #25	IFIT5 (ENSANAG00000038185) ##26	IFIT1 (ENSANAG00000038377) #26	IFIT1B (ENSANAG00000038456) #26	IFIT3 (ENSANAG00000034347) #28	IFIT2 (ENSANAG00000035731) #31	LIPA (ENSANAG00000038450) #32	FAS (ENSANAG00000038158) #34	STAMBPL1 (ENSANAG00000022945) #36
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rhinopithecus	ANCESTRAL SPECIES	94	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00390000001804.cb.a.a	ENSGT00390000018390.ic.a	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00550000074829.kb	ENSGT00390000003912	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a	ENSGT00510000048131	ENSGT00390000014743	ENSGT00550000075069	ENSGT00390000016605	ENSGT00390000004322.b.h	ENSGT01100000263562.b.a.a.c.b	ENSGT01100000263478.a.a	ENSGT01100000263478.a.b	ENSGT00390000007786.b	ENSGT00910000146994	ENSGT00910000147870
Golden snub-nosed monkey	MODERN SPECIES	2218																HTR7 (ENSRROG00000030218) #22	ENSRROG00000030184	ENSRROG00000016223	KIF20B (ENSRROG00000045037) #23	PANK1 (ENSRROG00000028254) #24	SLC16A12 (ENSRROG00000029561) #25	IFIT5 (ENSRROG00000034590) ##26
Black snub-nosed monkey	MODERN SPECIES	1276												HECTD2 (ENSRBIG00000044396) #18	PCGF5 (ENSRBIG00000041808) #19	ANKRD1 (ENSRBIG00000022719) #20	RPP30 (ENSRBIG00000036948) #21	HTR7 (ENSRBIG00000017965) #22	ENSRBIG00000042902	ENSRBIG00000032742	ENSRBIG00000024557	KIF20B (ENSRBIG00000004425) #23	PANK1 (ENSRBIG00000038690) #24	SLC16A12 (ENSRBIG00000039340) #25	IFIT5 (ENSRBIG00000000113) ##26	ENSRBIG00000041932 #26
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Vervet Monkey	MODERN SPECIES	28	EXOC6 (ENSCSAG00000006536) #8	HHEX (ENSCSAG00000006543)	KIF11 (ENSCSAG00000006555) #10	IDE (ENSCSAG00000006565) #11	MARCHF5 (ENSCSAG00000006574) #12	CPEB3 (ENSCSAG00000006579) #13	BTAF1 (ENSCSAG00000006589) #14	ENSCSAG00000018442	FGFBP3 (ENSCSAG00000018441) #15	TNKS2 (ENSCSAG00000006602) #16	PPP1R3C (ENSCSAG00000006607) #17	HECTD2 (ENSCSAG00000006666) #18	PCGF5 (ENSCSAG00000006687) #19	ANKRD1 (ENSCSAG00000006691) #20	RPP30 (ENSCSAG00000006694) #21	HTR7 (ENSCSAG00000006705) #22	KIF20B (ENSCSAG00000006740) #23	PANK1 (ENSCSAG00000006763) #24	SLC16A12 (ENSCSAG00000006767) #25	IFIT5 (ENSCSAG00000006768) ##26	IFIT1 (ENSCSAG00000006770) #26	IFIT1B (ENSCSAG00000018440) #26	IFIT3 (ENSCSAG00000006774) #28	IFIT2 (ENSCSAG00000006776) #31	LIPA (ENSCSAG00000006783) #32	CH25H (ENSCSAG00000018439) #33	ACTA2 (ENSCSAG00000006787) #35	STAMBPL1 (ENSCSAG00000006795) #36	ANKRD22 (ENSCSAG00000006799) #37	LIPM (ENSCSAG00000006821)	ENSCSAG00000006847
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750.b #18	ENSGT00940000157750.a.a #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Olive baboon	MODERN SPECIES	2	HHEX (ENSPANG00000021555)	KIF11 (ENSPANG00000021559) #10	IDE (ENSPANG00000021569) #11	MARCHF5 (ENSPANG00000021562) #12	CPEB3 (ENSPANG00000021561) #13	ENSPANG00000030166	BTAF1 (ENSPANG00000021620) #14	FGFBP3 (ENSPANG00000045162) #15	TNKS2 (ENSPANG00000021618) #16	PPP1R3C (ENSPANG00000021656) #17	HECTD2 (ENSPANG00000021659) #18	PCGF5 (ENSPANG00000021696) #19	ANKRD1 (ENSPANG00000021697) #20	RPP30 (ENSPANG00000021710) #21	ENSPANG00000016752	HTR7 (ENSPANG00000021709) #22	KIF20B (ENSPANG00000021707) #23	ENSPANG00000043772	PANK1 (ENSPANG00000021705) #24	SLC16A12 (ENSPANG00000021703) #25	IFIT5 (ENSPANG00000021702) ##26	IFIT1B (ENSPANG00000010650) #26	IFIT3 (ENSPANG00000021698) #28	LIPA (ENSPANG00000021738) #32	CH25H (ENSPANG00000043199) #33	ENSPANG00000046874	STAMBPL1 (ENSPANG00000021744) #36	ENSPANG00000048276	ACTA2 (ENSPANG00000021748) #35	ANKRD22 (ENSPANG00000021742) #37	LIPM (ENSPANG00000021739)
Cercopithecinae_d	ANCESTRAL SPECIES	95	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750.b #18	ENSGT00940000157750.a.a #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Drill	MODERN SPECIES	1454												ENSMLEG00000030390 #18	PCGF5 (ENSMLEG00000037151) #19	ANKRD1 (ENSMLEG00000039391) #20	RPP30 (ENSMLEG00000037578) #21	HTR7 (ENSMLEG00000030712) #22	KIF20B (ENSMLEG00000035041) #23	ENSMLEG00000017756	PANK1 (ENSMLEG00000038680) #24	SLC16A12 (ENSMLEG00000037319) #25	IFIT5 (ENSMLEG00000029293) ##26	IFIT1B (ENSMLEG00000034358) #26	IFIT3 (ENSMLEG00000028099) #28	IFIT2 (ENSMLEG00000039597) #31	LIPA (ENSMLEG00000006699) #32
Sooty mangabey	MODERN SPECIES	115	HHEX (ENSCATG00000042941)	KIF11 (ENSCATG00000040149) #10	IDE (ENSCATG00000039886) #11	ENSCATG00000039239	MARCHF5 (ENSCATG00000013785) #12	CPEB3 (ENSCATG00000038447) #13	ENSCATG00000034470	ENSCATG00000021700	BTAF1 (ENSCATG00000043731) #14	TNKS2 (ENSCATG00000035054) #16	PPP1R3C (ENSCATG00000040666) #17	HECTD2 (ENSCATG00000035693) #18	PCGF5 (ENSCATG00000045174) #19	ANKRD1 (ENSCATG00000031961) #20	RPP30 (ENSCATG00000042072) #21	HTR7 (ENSCATG00000027814) #22	KIF20B (ENSCATG00000036358) #23	ENSCATG00000016477	PANK1 (ENSCATG00000037209) #24	SLC16A12 (ENSCATG00000039042) #25	IFIT5 (ENSCATG00000040377) ##26	IFIT1B (ENSCATG00000044735) #26	IFIT3 (ENSCATG00000022496) #28	LIPA (ENSCATG00000028959) #32	FAS (ENSCATG00000042783) #34	STAMBPL1 (ENSCATG00000043803) #36	ACTA2 (ENSCATG00000037752) #35	ANKRD22 (ENSCATG00000030454) #37	LIPM (ENSCATG00000021790)	LIPN (ENSCATG00000044254)	LIPK (ENSCATG00000036197)
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Pig-tailed macaque	MODERN SPECIES	104	IDE (ENSMNEG00000033204) #11	MARCHF5 (ENSMNEG00000037845) #12	CPEB3 (ENSMNEG00000045465) #13	ENSMNEG00000030284	ENSMNEG00000033162	BTAF1 (ENSMNEG00000035134) #14	TNKS2 (ENSMNEG00000036136) #16	ENSMNEG00000029218	PPP1R3C (ENSMNEG00000040446) #17	HECTD2 (ENSMNEG00000043171) #18	PCGF5 (ENSMNEG00000041619) #19	ENSMNEG00000031049	ANKRD1 (ENSMNEG00000045466) #20	RPP30 (ENSMNEG00000033838) #21	ENSMNEG00000011783	HTR7 (ENSMNEG00000038453) #22	KIF20B (ENSMNEG00000030266) #23	ENSMNEG00000016798	PANK1 (ENSMNEG00000005927) #24	SLC16A12 (ENSMNEG00000032571) #25	IFIT5 (ENSMNEG00000044200) ##26	IFIT3 (ENSMNEG00000028978) #28	IFIT2 (ENSMNEG00000034947) #31	LIPA (ENSMNEG00000038016) #32	FAS (ENSMNEG00000028110) #34	STAMBPL1 (ENSMNEG00000036426) #36	ACTA2 (ENSMNEG00000031257) #35	ANKRD22 (ENSMNEG00000039914) #37	LIPM (ENSMNEG00000035058)	LIPN (ENSMNEG00000034373)	LIPK (ENSMNEG00000034597)
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Crab-eating macaque	MODERN SPECIES	19	CYP26C1 (ENSMFAG00000059589) #7	EXOC6 (ENSMFAG00000000962) #8	ENSMFAG00000055118	KIF11 (ENSMFAG00000036607) #10	IDE (ENSMFAG00000001464) #11	MARCHF5 (ENSMFAG00000041550) #12	CPEB3 (ENSMFAG00000025613) #13	BTAF1 (ENSMFAG00000044979) #14	TNKS2 (ENSMFAG00000001030) #16	PPP1R3C (ENSMFAG00000000348) #17	HECTD2 (ENSMFAG00000012546) #18	PCGF5 (ENSMFAG00000036587) #19	ANKRD1 (ENSMFAG00000003868) #20	RPP30 (ENSMFAG00000031109) #21	ENSMFAG00000056487	HTR7 (ENSMFAG00000001114) #22	KIF20B (ENSMFAG00000039355) #23	PANK1 (ENSMFAG00000032016) #24	SLC16A12 (ENSMFAG00000002755) #25	IFIT5 (ENSMFAG00000040940) ##26	IFIT2 (ENSMFAG00000044215) #31	IFIT3 (ENSMFAG00000045508) #28	LIPA (ENSMFAG00000035936) #32	CH25H (ENSMFAG00000058457) #33	ENSMFAG00000049084	ENSMFAG00000062703	ACTA2 (ENSMFAG00000000205) #35	STAMBPL1 (ENSMFAG00000033260) #36	ANKRD22 (ENSMFAG00000042098) #37	LIPM (ENSMFAG00000001039)	LIPN (ENSMFAG00000044901)
Rhesus	MODERN SPECIES	19	HHEX (ENSMMUG00000011789)	KIF11 (ENSMMUG00000023266) #10	IDE (ENSMMUG00000023267) #11	ENSMMUG00000052185	MARCHF5 (ENSMMUG00000004816) #12	CPEB3 (ENSMMUG00000015050) #13	BTAF1 (ENSMMUG00000017627) #14	FGFBP3 (ENSMMUG00000059608) #15	TNKS2 (ENSMMUG00000007478) #16	PPP1R3C (ENSMMUG00000000242) #17	HECTD2 (ENSMMUG00000000238) #18	ENSMMUG00000050611	PCGF5 (ENSMMUG00000038018) #19	ANKRD1 (ENSMMUG00000006632) #20	RPP30 (ENSMMUG00000006628) #21	HTR7 (ENSMMUG00000059038) #22	ENSMMUG00000063840	ENSMMUG00000052467	KIF20B (ENSMMUG00000013485) #23	PANK1 (ENSMMUG00000010780) #24	SLC16A12 (ENSMMUG00000017535) #25	ENSMMUG00000056491	IFIT5 (ENSMMUG00000017534) ##26	IFIT1 (ENSMMUG00000017533) #26	IFIT3 (ENSMMUG00000005001) #28	ENSMMUG00000058942	IFIT2 (ENSMMUG00000061761) #31	LIPA (ENSMMUG00000056618) #32	CH25H (ENSMMUG00000055047) #33	ACTA2 (ENSMMUG00000009341) #35	STAMBPL1 (ENSMMUG00000009339) #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Gibbon	MODERN SPECIES	18	EXOC6 (ENSNLEG00000012713) #8	ENSNLEG00000012707	KIF11 (ENSNLEG00000012674) #10	IDE (ENSNLEG00000012631) #11	MARCHF5 (ENSNLEG00000012617) #12	CPEB3 (ENSNLEG00000012600) #13	ENSNLEG00000035780	BTAF1 (ENSNLEG00000012513) #14	TNKS2 (ENSNLEG00000012457) #16	PPP1R3C (ENSNLEG00000012453) #17	HECTD2 (ENSNLEG00000012415) #18	PCGF5 (ENSNLEG00000033917) #19	ENSNLEG00000034294	ANKRD1 (ENSNLEG00000012395) #20	RPP30 (ENSNLEG00000012383) #21	ENSNLEG00000012379 #22	ENSNLEG00000035960	KIF20B (ENSNLEG00000012326) #23	ENSNLEG00000012314 #24	SLC16A12 (ENSNLEG00000012310) #25	IFIT5 (ENSNLEG00000033953) ##26	LIPA (ENSNLEG00000031920) #32	IFIT1 (ENSNLEG00000012308) #26	IFIT1B (ENSNLEG00000018636) #26	IFIT2 (ENSNLEG00000018635) #31	CH25H (ENSNLEG00000018634) #33	FAS (ENSNLEG00000012260) #34	ACTA2 (ENSNLEG00000012233) #35	STAMBPL1 (ENSNLEG00000012216) #36	ANKRD22 (ENSNLEG00000012212) #37	LIPM (ENSNLEG00000012208)
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Orangutan	MODERN SPECIES	1	HHEX (ENSPPYG00000002486)	ENSPPYG00000033680	KIF11 (ENSPPYG00000002484) #10	IDE (ENSPPYG00000002483) #11	MARCHF5 (ENSPPYG00000034208) #12	CPEB3 (ENSPPYG00000002481) #13	BTAF1 (ENSPPYG00000002480) #14	FGFBP3 (ENSPPYG00000002479) #15	TNKS2 (ENSPPYG00000036430) #16	PPP1R3C (ENSPPYG00000002478) #17	HECTD2 (ENSPPYG00000002477) #18	ENSPPYG00000002476	PCGF5 (ENSPPYG00000002475) #19	ANKRD1 (ENSPPYG00000002474) #20	RPP30 (ENSPPYG00000002473) #21	HTR7 (ENSPPYG00000002472) #22	ENSPPYG00000041425	KIF20B (ENSPPYG00000002471) #23	PANK1 (ENSPPYG00000002469) #24	SLC16A12 (ENSPPYG00000002468) #25	IFIT5 (ENSPPYG00000041118) ##26	IFIT1 (ENSPPYG00000002466) #26	IFIT1B (ENSPPYG00000002465) #26	IFIT3 (ENSPPYG00000002464) #28	IFIT2 (ENSPPYG00000002463) #31	LIPA (ENSPPYG00000002462) #32	CH25H (ENSPPYG00000002461) #33	FAS (ENSPPYG00000002460) #34	ACTA2 (ENSPPYG00000002459) #35	STAMBPL1 (ENSPPYG00000002457) #36	ANKRD22 (ENSPPYG00000002456) #37
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Pan	ANCESTRAL SPECIES	16	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Bonobo	MODERN SPECIES	1	KIF11 (ENSPPAG00000043128) #10	IDE (ENSPPAG00000044069) #11	ENSPPAG00000043024	MARCHF5 (ENSPPAG00000042800) #12	ENSPPAG00000028771	ENSPPAG00000027329	CPEB3 (ENSPPAG00000031528) #13	BTAF1 (ENSPPAG00000043906) #14	ENSPPAG00000036014 #15	TNKS2 (ENSPPAG00000040339) #16	PPP1R3C (ENSPPAG00000041638) #17	HECTD2 (ENSPPAG00000030085) #18	PCGF5 (ENSPPAG00000037314) #19	ANKRD1 (ENSPPAG00000035386) #20	RPP30 (ENSPPAG00000043779) #21	HTR7 (ENSPPAG00000039449) #22	KIF20B (ENSPPAG00000031329) #23	ENSPPAG00000041708 #24	SLC16A12 (ENSPPAG00000037557) #25	IFIT5 (ENSPPAG00000004000) ##26	IFIT1 (ENSPPAG00000026116) #26	IFIT1B (ENSPPAG00000011581) #26	IFIT3 (ENSPPAG00000031450) #28	IFIT2 (ENSPPAG00000027962) #31	LIPA (ENSPPAG00000037322) #32	CH25H (ENSPPAG00000024010) #33	FAS (ENSPPAG00000035792) #34	ACTA2 (ENSPPAG00000041922) #35	STAMBPL1 (ENSPPAG00000025072) #36	ANKRD22 (ENSPPAG00000027395) #37	LIPM (ENSPPAG00000040687)
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000042999	KIF11 (ENSPTRG00000002758) #10	IDE (ENSPTRG00000002757) #11	ENSPTRG00000049256	MARCHF5 (ENSPTRG00000024274) #12	ENSPTRG00000042284	CPEB3 (ENSPTRG00000002753) #13	BTAF1 (ENSPTRG00000002751) #14	FGFBP3 (ENSPTRG00000002750) #15	TNKS2 (ENSPTRG00000002749) #16	PPP1R3C (ENSPTRG00000041574) #17	HECTD2 (ENSPTRG00000002747) #18	PCGF5 (ENSPTRG00000023952) #19	ANKRD1 (ENSPTRG00000002743) #20	RPP30 (ENSPTRG00000002742) #21	HTR7 (ENSPTRG00000002741) #22	KIF20B (ENSPTRG00000022813) #23	PANK1 (ENSPTRG00000002738) #24	SLC16A12 (ENSPTRG00000002737) #25	IFIT5 (ENSPTRG00000002736) ##26	IFIT1 (ENSPTRG00000042784) #26	IFIT1B (ENSPTRG00000029833) #26	IFIT3 (ENSPTRG00000029834) #28	IFIT2 (ENSPTRG00000002733) #31	LIPA (ENSPTRG00000002732) #32	CH25H (ENSPTRG00000002731) #33	FAS (ENSPTRG00000002730) #34	ACTA2 (ENSPTRG00000048353) #35	STAMBPL1 (ENSPTRG00000002727) #36	ANKRD22 (ENSPTRG00000002726) #37	LIPM (ENSPTRG00000002725)
Human	MODERN SPECIES	1	CYP26C1 (ENSG00000187553) #7	EXOC6 (ENSG00000138190) #8	HHEX (ENSG00000152804)	KIF11 (ENSG00000138160) #10	IDE (ENSG00000119912) #11	MARCHF5 (ENSG00000198060) #12	CPEB3 (ENSG00000107864) #13	BTAF1 (ENSG00000095564) #14	FGFBP3 (ENSG00000174721) #15	TNKS2 (ENSG00000107854) #16	PPP1R3C (ENSG00000119938) #17	HECTD2 (ENSG00000165338) #18	PCGF5 (ENSG00000180628) #19	ANKRD1 (ENSG00000148677) #20	RPP30 (ENSG00000148688) #21	HTR7 (ENSG00000148680) #22	KIF20B (ENSG00000138182) #23	PANK1 (ENSG00000152782) #24	SLC16A12 (ENSG00000152779) #25	IFIT5 (ENSG00000152778) ##26	IFIT1 (ENSG00000185745) #26	IFIT1B (ENSG00000204010) #26	IFIT3 (ENSG00000119917) #28	IFIT2 (ENSG00000119922) #31	LIPA (ENSG00000107798) #32	CH25H (ENSG00000138135) #33	FAS (ENSG00000026103) #34	ACTA2 (ENSG00000107796) #35	STAMBPL1 (ENSG00000138134) #36	ANKRD22 (ENSG00000152766) #37	LIPM (ENSG00000173239)
Gorilla	MODERN SPECIES	1	ENSGGOG00000024168	ENSGGOG00000039016	KIF11 (ENSGGOG00000011847) #10	IDE (ENSGGOG00000010776) #11	ENSGGOG00000036985	MARCHF5 (ENSGGOG00000009767) #12	ENSGGOG00000039357	CPEB3 (ENSGGOG00000016441) #13	BTAF1 (ENSGGOG00000007216) #14	TNKS2 (ENSGGOG00000009781) #16	PPP1R3C (ENSGGOG00000008830) #17	HECTD2 (ENSGGOG00000010273) #18	PCGF5 (ENSGGOG00000042231) #19	ANKRD1 (ENSGGOG00000008160) #20	RPP30 (ENSGGOG00000026917) #21	HTR7 (ENSGGOG00000016305) #22	KIF20B (ENSGGOG00000000635) #23	ENSGGOG00000001160 #24	SLC16A12 (ENSGGOG00000003986) #25	IFIT5 (ENSGGOG00000003981) ##26	IFIT1 (ENSGGOG00000023234) #26	IFIT1B (ENSGGOG00000023376) #26	IFIT3 (ENSGGOG00000012012) #28	IFIT2 (ENSGGOG00000010407) #31	LIPA (ENSGGOG00000003979) #32	CH25H (ENSGGOG00000024451) #33	FAS (ENSGGOG00000025975) #34	ACTA2 (ENSGGOG00000013421) #35	STAMBPL1 (ENSGGOG00000026429) #36	ANKRD22 (ENSGGOG00000040380) #37	LIPM (ENSGGOG00000007315)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Pan	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Bonobo	MODERN SPECIES	3	BORCS5 (ENSPPAG00000031668)	ENSPPAG00000042523	DUSP16 (ENSPPAG00000034313)	ENSPPAG00000026761	ENSPPAG00000039536	GPR19 (ENSPPAG00000019455)	CDKN1B (ENSPPAG00000029743)	APOLD1 (ENSPPAG00000016129)	DDX47 (ENSPPAG00000039793)	ENSPPAG00000041632	ENSPPAG00000041954	ENSPPAG00000019107	GPRC5A (ENSPPAG00000030927)	GPRC5D (ENSPPAG00000036660)	HEBP1 (ENSPPAG00000040043)	ENSPPAG00000042219 #22	FAM234B (ENSPPAG00000042392)	GSG1 (ENSPPAG00000039917)	EMP1 (ENSPPAG00000030276)	GRIN2B (ENSPPAG00000026726)	ATF7IP (ENSPPAG00000035291)	PLBD1 (ENSPPAG00000031093)	GUCY2C (ENSPPAG00000024389)	ENSPPAG00000015575	H2AJ (ENSPPAG00000024162)	WBP11 (ENSPPAG00000040748)	SMCO3 (ENSPPAG00000026259)	ART4 (ENSPPAG00000031731)	MGP (ENSPPAG00000042944)	ERP27 (ENSPPAG00000038568)	ARHGDIB (ENSPPAG00000037213)
Tarsier	MODERN SPECIES	4606											PPP1R3C (ENSTSYG00000014067) #17	HECTD2 (ENSTSYG00000009145) #18	PCGF5 (ENSTSYG00000003037) #19	ANKRD1 (ENSTSYG00000000542) #20	RPP30 (ENSTSYG00000013903) #21	HTR7 (ENSTSYG00000003901) #22
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Suina	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Pig	MODERN SPECIES	5	HHEX (ENSSSCG00000036314)	KIF11 (ENSSSCG00000010471) #10	IDE (ENSSSCG00000010470) #11	MARCHF5 (ENSSSCG00000039887) #12	CPEB3 (ENSSSCG00000010468) #13	BTAF1 (ENSSSCG00000010467) #14	FGFBP3 (ENSSSCG00000010466) #15	ENSSSCG00000031691	TNKS2 (ENSSSCG00000010465) #16	PPP1R3C (ENSSSCG00000010464) #17	HECTD2 (ENSSSCG00000020912) #18	ENSSSCG00000035635	ENSSSCG00000036083 #19	ANKRD1 (ENSSSCG00000010461) #20	RPP30 (ENSSSCG00000010460) #21	HTR7 (ENSSSCG00000010459) #22	ENSSSCG00000045077	KIF20B (ENSSSCG00000010457) #23	PANK1 (ENSSSCG00000010456) #24	SLC16A12 (ENSSSCG00000010455) #25	IFIT5 (ENSSSCG00000010454) ##26	IFIT1 (ENSSSCG00000010452) #26	ENSSSCG00000050592	IFIT3 (ENSSSCG00000061268) #28	IFIT2 (ENSSSCG00000010451) #31	LIPA (ENSSSCG00000010450) #32	CH25H (ENSSSCG00000010449) #33	ENSSSCG00000041185	FAS (ENSSSCG00000010448) #34	ACTA2 (ENSSSCG00000010447) #35	STAMBPL1 (ENSSSCG00000010446) #36
Chacoan peccary	MODERN SPECIES	199	ENSCWAG00000004341	HHEX (ENSCWAG00000004396)	KIF11 (ENSCWAG00000004437) #10	IDE (ENSCWAG00000004471) #11	MARCHF5 (ENSCWAG00000004568) #12	CPEB3 (ENSCWAG00000004608) #13	BTAF1 (ENSCWAG00000004722) #14	FGFBP3 (ENSCWAG00000004902) #15	TNKS2 (ENSCWAG00000004919) #16	PPP1R3C (ENSCWAG00000005006) #17	HECTD2 (ENSCWAG00000005037) #18	ENSCWAG00000005131	PCGF5 (ENSCWAG00000005162) #19	ANKRD1 (ENSCWAG00000005259) #20	RPP30 (ENSCWAG00000008008) #21	HTR7 (ENSCWAG00000008075) #22	KIF20B (ENSCWAG00000008159) #23	ENSCWAG00000008224	PANK1 (ENSCWAG00000008284) #24	SLC16A12 (ENSCWAG00000008589) #25	IFIT5 (ENSCWAG00000008673) ##26	IFIT1 (ENSCWAG00000008707) #26	IFIT3 (ENSCWAG00000008761) #28	IFIT2 (ENSCWAG00000008808) #31	LIPA (ENSCWAG00000008833) #32	CH25H (ENSCWAG00000008878) #33	FAS (ENSCWAG00000008900) #34	STAMBPL1 (ENSCWAG00000008940) #36	ACTA2 (ENSCWAG00000009181) #35	ANKRD22 (ENSCWAG00000009235) #37	LIPM (ENSCWAG00000009317)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Camelidae	ANCESTRAL SPECIES	4	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Arabian camel	MODERN SPECIES	2	HHEX (ENSCDRG00005015775)	KIF11 (ENSCDRG00005015805) #10	IDE (ENSCDRG00005015873) #11	MARCHF5 (ENSCDRG00005016050) #12	CPEB3 (ENSCDRG00005016108) #13	BTAF1 (ENSCDRG00005016182) #14	FGFBP3 (ENSCDRG00005016458) #15	TNKS2 (ENSCDRG00005016655) #16	PPP1R3C (ENSCDRG00005019219) #17	ENSCDRG00005019242 #18	ENSCDRG00005019264 #18	PCGF5 (ENSCDRG00005019307) #19	ENSCDRG00005019353	ANKRD1 (ENSCDRG00005019372) #20	RPP30 (ENSCDRG00005019395) #21	HTR7 (ENSCDRG00005019416) #22	KIF20B (ENSCDRG00005019451) #23	ENSCDRG00005019479 #24	ENSCDRG00005019495 #24	SLC16A12 (ENSCDRG00005006630) #25	IFIT5 (ENSCDRG00005006693) ##26	IFIT1 (ENSCDRG00005006735) #26	IFIT3 (ENSCDRG00005006755) #28	IFIT2 (ENSCDRG00005006766) #31	LIPA (ENSCDRG00005006808) #32	CH25H (ENSCDRG00005006925) #33	FAS (ENSCDRG00005006938) #34	STAMBPL1 (ENSCDRG00005006996) #36	ACTA2 (ENSCDRG00005007102) #35	ANKRD22 (ENSCDRG00005007227) #37	LIPM (ENSCDRG00005007263)
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cetacea	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066	ENSGT00390000016052
Beluga whale	MODERN SPECIES	65	CYP26A1 (ENSDLEG00000021625) ##7	EXOC6 (ENSDLEG00000021629) #8	HHEX (ENSDLEG00000021649)	KIF11 (ENSDLEG00000021651) #10	IDE (ENSDLEG00000021661) #11	MARCH5 (ENSDLEG00000021669) #12	CPEB3 (ENSDLEG00000021679) #13	BTAF1 (ENSDLEG00000021723) #14	FGFBP3 (ENSDLEG00000021759) #15	TNKS2 (ENSDLEG00000021762) #16	PPP1R3C (ENSDLEG00000021766) #17	ENSDLEG00000021769 #18	PCGF5 (ENSDLEG00000021786) #19	ANKRD1 (ENSDLEG00000021795) #20	RPP30 (ENSDLEG00000021799) #21	HTR7 (ENSDLEG00000021800) #22	KIF20B (ENSDLEG00000021804) #23	PANK1 (ENSDLEG00000021806) #24	SLC16A12 (ENSDLEG00000021813) #25	IFIT5 (ENSDLEG00000021815) ##26	LIPA (ENSDLEG00000021819) #32	CH25H (ENSDLEG00000021823) #33	FAS (ENSDLEG00000021827) #34	ACTA2 (ENSDLEG00000021829) #35	STAMBPL1 (ENSDLEG00000021830) #36	ANKRD22 (ENSDLEG00000021832) #37	LIPM (ENSDLEG00000007943)	LIPN (ENSDLEG00000007954)	LIPK (ENSDLEG00000007972)	LIPF (ENSDLEG00000007994)	ENSDLEG00000008034
Narwhal	MODERN SPECIES	311	CYP26C1 (ENSMMNG00015014755) #7	EXOC6 (ENSMMNG00015014660) #8	HHEX (ENSMMNG00015014611)	KIF11 (ENSMMNG00015014591) #10	IDE (ENSMMNG00015014543) #11	MARCHF5 (ENSMMNG00015014501) #12	CPEB3 (ENSMMNG00015014489) #13	BTAF1 (ENSMMNG00015014407) #14	FGFBP3 (ENSMMNG00015014375) #15	TNKS2 (ENSMMNG00015014252) #16	PPP1R3C (ENSMMNG00015014217) #17	ENSMMNG00015014186 #18	PCGF5 (ENSMMNG00015014168) #19	ANKRD1 (ENSMMNG00015014157) #20	RPP30 (ENSMMNG00015014149) #21	HTR7 (ENSMMNG00015014134) #22	KIF20B (ENSMMNG00015014086) #23	PANK1 (ENSMMNG00015014031) #24	SLC16A12 (ENSMMNG00015014005) #25	IFIT5 (ENSMMNG00015013989) ##26	LIPA (ENSMMNG00015013970) #32	CH25H (ENSMMNG00015013959) #33	FAS (ENSMMNG00015013934) #34	ACTA2 (ENSMMNG00015013862) #35	STAMBPL1 (ENSMMNG00015013850) #36	ANKRD22 (ENSMMNG00015013839) #37	LIPM (ENSMMNG00015013823)	LIPN (ENSMMNG00015013810)	LIPK (ENSMMNG00015013791)	LIPF (ENSMMNG00015013755)	RNLS (ENSMMNG00015013738)
Vaquita	MODERN SPECIES	7	IDE (ENSPSNG00000011347) #11	ENSPSNG00000011256	ENSPSNG00000011227	ENSPSNG00000011178	ENSPSNG00000011142	MARCHF5 (ENSPSNG00000011092) #12	CPEB3 (ENSPSNG00000010887) #13	BTAF1 (ENSPSNG00000010780) #14	FGFBP3 (ENSPSNG00000010751) #15	TNKS2 (ENSPSNG00000010639) #16	PPP1R3C (ENSPSNG00000010577) #17	HECTD2 (ENSPSNG00000010485) #18	PCGF5 (ENSPSNG00000010438) #19	ANKRD1 (ENSPSNG00000010391) #20	RPP30 (ENSPSNG00000010340) #21	HTR7 (ENSPSNG00000010211) #22	KIF20B (ENSPSNG00000010121) #23	PANK1 (ENSPSNG00000009918) #24	SLC16A12 (ENSPSNG00000009808) #25	IFIT5 (ENSPSNG00000009619) ##26	IFIT1 (ENSPSNG00000020823) #26	LIPA (ENSPSNG00000020759) #32	CH25H (ENSPSNG00000020727) #33	FAS (ENSPSNG00000020648) #34	ACTA2 (ENSPSNG00000020576) #35	STAMBPL1 (ENSPSNG00000020503) #36	ANKRD22 (ENSPSNG00000020462) #37	LIPM (ENSPSNG00000020410)	LIPN (ENSPSNG00000020364)	LIPK (ENSPSNG00000020318)	RNLS (ENSPSNG00000020289)
Dolphin	MODERN SPECIES	982														ANKRD1 (ENSTTRG00000014709) #20	RPP30 (ENSTTRG00000014708) #21	HTR7 (ENSTTRG00000014706) #22
Sperm whale	MODERN SPECIES	12	HHEX (ENSPCTG00005021764)	KIF11 (ENSPCTG00005021743) #10	ENSPCTG00005021723	IDE (ENSPCTG00005021667) #11	ENSPCTG00005021640	MARCH5 (ENSPCTG00005021621) #12	CPEB3 (ENSPCTG00005021568) #13	BTAF1 (ENSPCTG00005021292) #14	FGFBP3 (ENSPCTG00005021257) #15	TNKS2 (ENSPCTG00005021153) #16	PPP1R3C (ENSPCTG00005021115) #17	HECTD2 (ENSPCTG00005021069) #18	PCGF5 (ENSPCTG00005021034) #19	ANKRD1 (ENSPCTG00005021000) #20	RPP30 (ENSPCTG00005020952) #21	HTR7 (ENSPCTG00005020889) #22	KIF20B (ENSPCTG00005020786) #23	PANK1 (ENSPCTG00005020702) #24	SLC16A12 (ENSPCTG00005020592) #25	IFIT5 (ENSPCTG00005020572) ##26	IFIT1 (ENSPCTG00005020556) #26	LIPA (ENSPCTG00005020484) #32	CH25H (ENSPCTG00005020465) #33	FAS (ENSPCTG00005020359) #34	ACTA2 (ENSPCTG00005020294) #35	STAMBPL1 (ENSPCTG00005020236) #36	ANKRD22 (ENSPCTG00005020200) #37	LIPM (ENSPCTG00005020133)	LIPN (ENSPCTG00005020102)	LIPF (ENSPCTG00005019974)	ENSPCTG00005019926
Blue whale	MODERN SPECIES	7	CYP26C1 (ENSBMSG00010022056) #7	EXOC6 (ENSBMSG00010022075) #8	HHEX (ENSBMSG00010022091)	KIF11 (ENSBMSG00010022092) #10	IDE (ENSBMSG00010022094) #11	MARCHF5 (ENSBMSG00010022096) #12	CPEB3 (ENSBMSG00010022099) #13	BTAF1 (ENSBMSG00010022106) #14	FGFBP3 (ENSBMSG00010022112) #15	TNKS2 (ENSBMSG00010022115) #16	PPP1R3C (ENSBMSG00010022118) #17	HECTD2 (ENSBMSG00010022121) #18	PCGF5 (ENSBMSG00010022123) #19	ANKRD1 (ENSBMSG00010022126) #20	ENSBMSG00010022128 #21	HTR7 (ENSBMSG00010022131) #22	KIF20B (ENSBMSG00010022136) #23	PANK1 (ENSBMSG00010022142) #24	SLC16A12 (ENSBMSG00010022151) #25	IFIT5 (ENSBMSG00010022155) ##26	IFIT1 (ENSBMSG00010022157) #26	LIPA (ENSBMSG00010022162) #32	CH25H (ENSBMSG00010022165) #33	FAS (ENSBMSG00010022172) #34	ACTA2 (ENSBMSG00010022175) #35	STAMBPL1 (ENSBMSG00010022177) #36	ANKRD22 (ENSBMSG00010022180) #37	LIPM (ENSBMSG00010022182)	LIPN (ENSBMSG00010022184)	LIPK (ENSBMSG00010022187)	LIPF (ENSBMSG00010022190)
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Percora_a	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Bovidae	ANCESTRAL SPECIES	24	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Caprinae	ANCESTRAL SPECIES	19	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Goat	MODERN SPECIES	18	HHEX (ENSCHIG00000006086)	KIF11 (ENSCHIG00000018268) #10	IDE (ENSCHIG00000016617) #11	MARCHF5 (ENSCHIG00000020959) #12	CPEB3 (ENSCHIG00000017337) #13	BTAF1 (ENSCHIG00000007545) #14	FGFBP3 (ENSCHIG00000015157) #15	TNKS2 (ENSCHIG00000021316) #16	PPP1R3C (ENSCHIG00000023028) #17	HECTD2 (ENSCHIG00000017583) #18	PCGF5 (ENSCHIG00000020514) #19	ENSCHIG00000011467	ANKRD1 (ENSCHIG00000018645) #20	ENSCHIG00000009829	RPP30 (ENSCHIG00000012901) #21	HTR7 (ENSCHIG00000018265) #22	ENSCHIG00000024269	KIF20B (ENSCHIG00000012350) #23	PANK1 (ENSCHIG00000017163) #24	SLC16A12 (ENSCHIG00000007599) #25	IFIT5 (ENSCHIG00000005737) ##26	IFIT1 (ENSCHIG00000021671) #26	IFIT3 (ENSCHIG00000014238) #28	IFIT2 (ENSCHIG00000017063) #31	LIPA (ENSCHIG00000020254) #32	CH25H (ENSCHIG00000004030) #33	FAS (ENSCHIG00000013251) #34	ACTA2 (ENSCHIG00000017779) #35	STAMBPL1 (ENSCHIG00000011285) #36	ANKRD22 (ENSCHIG00000007037) #37	LIPM (ENSCHIG00000020369)
Rambouillet Sheep	MODERN SPECIES	14	EXOC6 (ENSOARG00020014320) #8	HHEX (ENSOARG00020014229)	KIF11 (ENSOARG00020013982) #10	IDE (ENSOARG00020013259) #11	MARCHF5 (ENSOARG00020013178) #12	CPEB3 (ENSOARG00020012975) #13	BTAF1 (ENSOARG00020011767) #14	FGFBP3 (ENSOARG00020011708) #15	TNKS2 (ENSOARG00020011293) #16	PPP1R3C (ENSOARG00020011237) #17	HECTD2 (ENSOARG00020010414) #18	ENSOARG00020010346	PCGF5 (ENSOARG00020010217) #19	ANKRD1 (ENSOARG00020010048) #20	RPP30 (ENSOARG00020009954) #21	HTR7 (ENSOARG00020009867) #22	KIF20B (ENSOARG00020009389) #23	PANK1 (ENSOARG00020009031) #24	SLC16A12 (ENSOARG00020008925) #25	IFIT5 (ENSOARG00020008889) ##26	IFIT3 (ENSOARG00020008812) #28	IFIT2 (ENSOARG00020008771) #31	LIPA (ENSOARG00020008655) #32	CH25H (ENSOARG00020008637) #33	FAS (ENSOARG00020008595) #34	ACTA2 (ENSOARG00020008488) #35	STAMBPL1 (ENSOARG00020008275) #36	ANKRD22 (ENSOARG00020008170) #37	LIPM (ENSOARG00020008055)	LIPN (ENSOARG00020007970)	LIPK (ENSOARG00020007908)
Bovinae	ANCESTRAL SPECIES	22	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Bos	ANCESTRAL SPECIES	23	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000178439	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Bos_a	ANCESTRAL SPECIES	17	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000178439	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Wild yak	MODERN SPECIES	802														ANKRD1 (ENSBMUG00000021834) #20	RPP30 (ENSBMUG00000021823) #21	HTR7 (ENSBMUG00000021808) #22	ENSBMUG00000021795	ENSBMUG00000021766 #23	PANK1 (ENSBMUG00000021708) #24
Domestic yak	MODERN SPECIES	17	KIF11 (ENSBGRG00000020999) #10	IDE (ENSBGRG00000020820) #11	ENSBGRG00000020719 #12	ENSBGRG00000020694	ENSBGRG00000020671	CPEB3 (ENSBGRG00000020594) #13	BTAF1 (ENSBGRG00000020034) #14	FGFBP3 (ENSBGRG00000020006) #15	TNKS2 (ENSBGRG00000019891) #16	PPP1R3C (ENSBGRG00000019847) #17	HECTD2 (ENSBGRG00000019144) #18	ENSBGRG00000019091	PCGF5 (ENSBGRG00000018971) #19	ANKRD1 (ENSBGRG00000018779) #20	RPP30 (ENSBGRG00000018614) #21	HTR7 (ENSBGRG00000018513) #22	ENSBGRG00000018495	ENSBGRG00000018400 #23	PANK1 (ENSBGRG00000018127) #24	ENSBGRG00000018089	SLC16A12 (ENSBGRG00000017960) #25	IFIT5 (ENSBGRG00000017931) ##26	IFIT1 (ENSBGRG00000017867) #26	IFIT3 (ENSBGRG00000017794) #28	IFIT2 (ENSBGRG00000017758) #31	LIPA (ENSBGRG00000017545) #32	ENSBGRG00000017517	CH25H (ENSBGRG00000017491) #33	FAS (ENSBGRG00000017283) #34	ACTA2 (ENSBGRG00000017216) #35	STAMBPL1 (ENSBGRG00000016961) #36
Bos_b	ANCESTRAL SPECIES	23	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00940000154696 #32	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cow	MODERN SPECIES	18	EXOC6 (ENSBTAG00000021116) #8	HHEX (ENSBTAG00000014217)	KIF11 (ENSBTAG00000009383) #10	IDE (ENSBTAG00000019759) #11	MARCHF5 (ENSBTAG00000020981) #12	CPEB3 (ENSBTAG00000015450) #13	BTAF1 (ENSBTAG00000016104) #14	ENSBTAG00000048707	TNKS2 (ENSBTAG00000009279) #16	ENSBTAG00000053518	PPP1R3C (ENSBTAG00000014831) #17	HECTD2 (ENSBTAG00000011651) #18	PCGF5 (ENSBTAG00000004964) #19	ANKRD1 (ENSBTAG00000011734) #20	RPP30 (ENSBTAG00000002973) #21	HTR7 (ENSBTAG00000008783) #22	ENSBTAG00000034597	ENSBTAG00000048815	KIF20B (ENSBTAG00000005708) #23	PANK1 (ENSBTAG00000010442) #24	SLC16A12 (ENSBTAG00000004662) #25	IFIT5 (ENSBTAG00000017367) ##26	IFIT1 (ENSBTAG00000007881) #26	IFIT3 (ENSBTAG00000009768) #28	IFIT2 (ENSBTAG00000034918) #31	LIPA (ENSBTAG00000003636) #32	ENSBTAG00000052813	FAS (ENSBTAG00000010785) #34	ACTA2 (ENSBTAG00000014614) #35	ENSBTAG00000049887	STAMBPL1 (ENSBTAG00000001298) #36
Hybrid Bos Indicus	MODERN SPECIES	18	HHEX (ENSBIXG00005004354)	ENSBIXG00005025474 #10	IDE (ENSBIXG00005025409) #11	ENSBIXG00005005888	ENSBIXG00005025287 #12	CPEB3 (ENSBIXG00005025261) #13	BTAF1 (ENSBIXG00005025149) #14	FGFBP3 (ENSBIXG00005024752) #15	TNKS2 (ENSBIXG00005024734) #16	PPP1R3C (ENSBIXG00005024657) #17	HECTD2 (ENSBIXG00005024625) #18	PCGF5 (ENSBIXG00005024540) #19	ENSBIXG00005024487	ANKRD1 (ENSBIXG00005024463) #20	RPP30 (ENSBIXG00005006914) #21	HTR7 (ENSBIXG00005006174) #22	KIF20B (ENSBIXG00005024297) #23	PANK1 (ENSBIXG00005024213) #24	ENSBIXG00005024097	SLC16A12 (ENSBIXG00005024072) #25	IFIT5 (ENSBIXG00005006284) ##26	LIPA (ENSBIXG00005023981) #32	IFIT1 (ENSBIXG00005004098) #26	IFIT3 (ENSBIXG00005023916) #28	IFIT2 (ENSBIXG00005004090) #31	CH25H (ENSBIXG00005023855) #33	FAS (ENSBIXG00005023818) #34	STAMBPL1 (ENSBIXG00005023795) #36	ACTA2 (ENSBIXG00005023710) #35	ENSBIXG00005023662	ANKRD22 (ENSBIXG00005004048) #37
American bison	MODERN SPECIES	3094	EXOC6 (ENSBBBG00000016620) #8	HHEX (ENSBBBG00000016547)	ENSBBBG00000016535	KIF11 (ENSBBBG00000007374) #10	IDE (ENSBBBG00000016483) #11	ENSBBBG00000008376 #12	CPEB3 (ENSBBBG00000004049) #13	ENSBBBG00000016226	BTAF1 (ENSBBBG00000004025) #14	TNKS2 (ENSBBBG00000016133) #16	PPP1R3C (ENSBBBG00000016106) #17	HECTD2 (ENSBBBG00000016095) #18	PCGF5 (ENSBBBG00000016004) #19	ANKRD1 (ENSBBBG00000015971) #20	RPP30 (ENSBBBG00000003974) #21	HTR7 (ENSBBBG00000015945) #22	ENSBBBG00000003963
Siberian musk deer	MODERN SPECIES	1163	EXOC6 (ENSMMSG00000010290) #8	ENSMMSG00000010687	HHEX (ENSMMSG00000010745)	KIF11 (ENSMMSG00000010787) #10	IDE (ENSMMSG00000010828) #11	MARCHF5 (ENSMMSG00000010975) #12	CPEB3 (ENSMMSG00000011018) #13	BTAF1 (ENSMMSG00000011097) #14	FGFBP3 (ENSMMSG00000011503) #15	TNKS2 (ENSMMSG00000011529) #16	PPP1R3C (ENSMMSG00000011617) #17	HECTD2 (ENSMMSG00000011643) #18	PCGF5 (ENSMMSG00000011720) #19	ANKRD1 (ENSMMSG00000011783) #20	RPP30 (ENSMMSG00000011808) #21	HTR7 (ENSMMSG00000011852) #22	ENSMMSG00000011885	ENSMMSG00000011925	ENSMMSG00000011945	ENSMMSG00000011963	KIF20B (ENSMMSG00000011982) #23	PANK1 (ENSMMSG00000012033) #24	SLC16A12 (ENSMMSG00000012145) #25	IFIT5 (ENSMMSG00000012168) ##26	IFIT1 (ENSMMSG00000012187) #26	IFIT3 (ENSMMSG00000012211) #28	IFIT2 (ENSMMSG00000012235) #31	LIPA (ENSMMSG00000012251) #32	CH25H (ENSMMSG00000012297) #33	FAS (ENSMMSG00000012306) #34	ACTA2 (ENSMMSG00000012340) #35
Yarkand deer	MODERN SPECIES	6	EXOC6 (ENSCHYG00000006774) #8	ENSCHYG00000006595	HHEX (ENSCHYG00000006561)	KIF11 (ENSCHYG00000006424) #10	IDE (ENSCHYG00000006140) #11	MARCHF5 (ENSCHYG00000006078) #12	CPEB3 (ENSCHYG00000005952) #13	BTAF1 (ENSCHYG00000005577) #14	FGFBP3 (ENSCHYG00000005534) #15	TNKS2 (ENSCHYG00000005401) #16	PPP1R3C (ENSCHYG00000005346) #17	HECTD2 (ENSCHYG00000005209) #18	PCGF5 (ENSCHYG00000005101) #19	ANKRD1 (ENSCHYG00000005059) #20	RPP30 (ENSCHYG00000005016) #21	HTR7 (ENSCHYG00000004976) #22	ENSCHYG00000004940	ENSCHYG00000004922	KIF20B (ENSCHYG00000004787) #23	PANK1 (ENSCHYG00000026916) #24	SLC16A12 (ENSCHYG00000026893) #25	IFIT3 (ENSCHYG00000026876) #28	IFIT2 (ENSCHYG00000026864) #31	ENSCHYG00000026859	ENSCHYG00000026853	ENSCHYG00000026839 #32	FAS (ENSCHYG00000026830) #34	ACTA2 (ENSCHYG00000026817) #35	STAMBPL1 (ENSCHYG00000026791) #36	ANKRD22 (ENSCHYG00000026783) #37	LIPM (ENSCHYG00000026759)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.m #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Greater horseshoe bat	MODERN SPECIES	7	CYP26A1 (ENSRFEG00010011911) ##7	CYP26C1 (ENSRFEG00010012145) #7	EXOC6 (ENSRFEG00010012254) #8	HHEX (ENSRFEG00010012651)	KIF11 (ENSRFEG00010012728) #10	IDE (ENSRFEG00010013085) #11	ENSRFEG00010013898	MARCHF5 (ENSRFEG00010013915) #12	CPEB3 (ENSRFEG00010013948) #13	BTAF1 (ENSRFEG00010014065) #14	FGFBP3 (ENSRFEG00010014160) #15	PPP1R3C (ENSRFEG00010015867) #17	HECTD2 (ENSRFEG00010015920) #18	PCGF5 (ENSRFEG00010016595) #19	RPP30 (ENSRFEG00010016677) #21	HTR7 (ENSRFEG00010016754) #22	KIF20B (ENSRFEG00010016868) #23	ENSRFEG00010018605	PANK1 (ENSRFEG00010018634) #24	SLC16A12 (ENSRFEG00010018846) #25	IFIT5 (ENSRFEG00010018858) ##26	IFIT1 (ENSRFEG00010018894) #26	IFIT3 (ENSRFEG00010018935) #28	IFIT2 (ENSRFEG00010018968) #31	LIPA (ENSRFEG00010018997) #32	ENSRFEG00010019037 #34	STAMBPL1 (ENSRFEG00010019067) #36	ACTA2 (ENSRFEG00010019133) #35	ANKRD22 (ENSRFEG00010019181) #37	LIPM (ENSRFEG00010019214)	LIPK (ENSRFEG00010019342)
Microbat	MODERN SPECIES	1121																HTR7 (ENSMLUG00000017165) #22	ENSMLUG00000023811	KIF20B (ENSMLUG00000012250) #23	PANK1 (ENSMLUG00000002554) #24	SLC16A12 (ENSMLUG00000005769) #25	IFIT5 (ENSMLUG00000005766) ##26	ENSMLUG00000016659 #26	IFIT3 (ENSMLUG00000016653) #28	IFIT2 (ENSMLUG00000016645) #31	LIPA (ENSMLUG00000016705) #32	CH25H (ENSMLUG00000008622) #33	FAS (ENSMLUG00000015521) #34	ACTA2 (ENSMLUG00000015509) #35	STAMBPL1 (ENSMLUG00000015481) #36	ANKRD22 (ENSMLUG00000003702) #37	LIPM (ENSMLUG00000003698)
Megabat	MODERN SPECIES	1277															RPP30 (ENSPVAG00000010524) #21	HTR7 (ENSPVAG00000010518) #22
Equus	ANCESTRAL SPECIES	9	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896.i.a #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.e ##26	ENSGT00950000182946.d.k.b #26	ENSGT00950000182946.c.a.f ##26	ENSGT00950000182946.d.k.a #26	ENSGT00950000182946.d.l #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36
Horse	MODERN SPECIES		CYP26C1 (ENSECAG00000023734) #7	EXOC6 (ENSECAG00000023825) #8	HHEX (ENSECAG00000005199)	KIF11 (ENSECAG00000006607) #10	IDE (ENSECAG00000010646) #11	MARCHF5 (ENSECAG00000000029) #12	CPEB3 (ENSECAG00000000077) #13	BTAF1 (ENSECAG00000007796) #14	FGFBP3 (ENSECAG00000004296) #15	TNKS2 (ENSECAG00000012810) #16	PPP1R3C (ENSECAG00000013703) #17	HECTD2 (ENSECAG00000013814) #18	ENSECAG00000016162 #19	ANKRD1 (ENSECAG00000016983) #20	RPP30 (ENSECAG00000021917) #21	HTR7 (ENSECAG00000022973) #22	ENSECAG00000048425	KIF20B (ENSECAG00000023331) #23	PANK1 (ENSECAG00000008032) #24	SLC16A12 (ENSECAG00000009558) #25	ENSECAG00000032818 ##26	ENSECAG00000047393	ENSECAG00000004433 #26	ENSECAG00000044124 ##26	ENSECAG00000045402 #26	ENSECAG00000033029 #26	LIPA (ENSECAG00000010840) #32	IFIT3 (ENSECAG00000010153) #28	IFIT2 (ENSECAG00000010185) #31	CH25H (ENSECAG00000004572) #33	FAS (ENSECAG00000013724) #34
Donkey	MODERN SPECIES	11	CYP26C1 (ENSEASG00005011142) #7	EXOC6 (ENSEASG00005011133) #8	HHEX (ENSEASG00005011129)	KIF11 (ENSEASG00005011108) #10	IDE (ENSEASG00005011102) #11	MARCHF5 (ENSEASG00005011099) #12	CPEB3 (ENSEASG00005023843) #13	BTAF1 (ENSEASG00005011085) #14	FGFBP3 (ENSEASG00005024292) #15	TNKS2 (ENSEASG00005011073) #16	PPP1R3C (ENSEASG00005011065) #17	HECTD2 (ENSEASG00005011060) #18	PCGF5 (ENSEASG00005011054) #19	ANKRD1 (ENSEASG00005011051) #20	RPP30 (ENSEASG00005011050) #21	HTR7 (ENSEASG00005011049) #22	KIF20B (ENSEASG00005011035) #23	PANK1 (ENSEASG00005011025) #24	SLC16A12 (ENSEASG00005011023) #25	ENSEASG00005011015 ##26	ENSEASG00005011018 #26	ENSEASG00005011021 ##26	ENSEASG00005011014 #26	ENSEASG00005011013 #26	IFIT3 (ENSEASG00005011738) #28	IFIT2 (ENSEASG00005011739) #31	LIPA (ENSEASG00005011741) #32	CH25H (ENSEASG00005024521) #33	FAS (ENSEASG00005011745) #34	ACTA2 (ENSEASG00005011763) #35	STAMBPL1 (ENSEASG00005012294) #36
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366
Ursidae	ANCESTRAL SPECIES	5	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838.kb	ENSGT00940000163366	ENSGT00940000163811
Giant Panda	MODERN SPECIES	16	EXOC6 (ENSAMEG00000014019) #8	HHEX (ENSAMEG00000025336)	KIF11 (ENSAMEG00000014099) #10	IDE (ENSAMEG00000014146) #11	MARCHF5 (ENSAMEG00000014193) #12	ENSAMEG00000014204 #13	BTAF1 (ENSAMEG00000014218) #14	FGFBP3 (ENSAMEG00000018741) #15	TNKS2 (ENSAMEG00000014261) #16	PPP1R3C (ENSAMEG00000023833) #17	ENSAMEG00000026502	HECTD2 (ENSAMEG00000015516) #18	PCGF5 (ENSAMEG00000016758) #19	ANKRD1 (ENSAMEG00000016767) #20	RPP30 (ENSAMEG00000016776) #21	HTR7 (ENSAMEG00000016787) #22	ENSAMEG00000030464	KIF20B (ENSAMEG00000016790) #23	PANK1 (ENSAMEG00000016804) #24	ENSAMEG00000016819 #25	ENSAMEG00000018958 ##26	ENSAMEG00000030767	ENSAMEG00000016834	ENSAMEG00000025142	RET (ENSAMEG00000016880)	CSGALNACT2 (ENSAMEG00000016913)	RASGEF1A (ENSAMEG00000016919)	ENSAMEG00000016938	ENSAMEG00000018983	ZNF239 (ENSAMEG00000016941)	ZNF485 (ENSAMEG00000016943)
Ursus	ANCESTRAL SPECIES	6	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000174703	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT01030000240239	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838.kb	ENSGT00940000163811
Polar bear	MODERN SPECIES	197	HHEX (ENSUMAG00000002806)	ENSUMAG00000002802	KIF11 (ENSUMAG00000002681) #10	IDE (ENSUMAG00000002080) #11	MARCHF5 (ENSUMAG00000001951) #12	ENSUMAG00000001870 #13	BTAF1 (ENSUMAG00000001220) #14	TNKS2 (ENSUMAG00000001139) #16	PPP1R3C (ENSUMAG00000001134) #17	ENSUMAG00000001121	HECTD2 (ENSUMAG00000001041) #18	PCGF5 (ENSUMAG00000001025) #19	ENSUMAG00000001016	ANKRD1 (ENSUMAG00000000974) #20	RPP30 (ENSUMAG00000000971) #21	HTR7 (ENSUMAG00000000952) #22	ENSUMAG00000000941	KIF20B (ENSUMAG00000000373) #23	PANK1 (ENSUMAG00000000298) #24	SLC16A12 (ENSUMAG00000000188) #25	ENSUMAG00000000151 ##26	ENSUMAG00000000072	BMS1 (ENSUMAG00000016523)	RET (ENSUMAG00000016509)	CSGALNACT2 (ENSUMAG00000016502)	RASGEF1A (ENSUMAG00000016496)	ENSUMAG00000016486	ENSUMAG00000016485	ZNF485 (ENSUMAG00000016450)	ZNF32 (ENSUMAG00000016448)	ENSUMAG00000016431
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000153582.b.a.b	ENSGT00390000014056.b.a
American mink	MODERN SPECIES	75	IDE (ENSNVIG00000020793) #11	MARH5 (ENSNVIG00000020768) #12	CPEB3 (ENSNVIG00000020717) #13	BTAF1 (ENSNVIG00000020659) #14	ENSNVIG00000020645	FGFBP3 (ENSNVIG00000020637) #15	TNKS2 (ENSNVIG00000020602) #16	PPR3C (ENSNVIG00000020586) #17	ENSNVIG00000020572	HECTD2 (ENSNVIG00000020493) #18	ENSNVIG00000020483	PCGF5 (ENSNVIG00000020436) #19	ENSNVIG00000020428	ANKRD1 (ENSNVIG00000020419) #20	RPP30 (ENSNVIG00000020403) #21	HTR7 (ENSNVIG00000020396) #22	ENSNVIG00000020388	KIF20B (ENSNVIG00000020314) #23	PANK1 (ENSNVIG00000020209) #24	SLC16A12 (ENSNVIG00000020192) #25	IFIT5 (ENSNVIG00000020183) ##26	BMS1 (ENSNVIG00000020158)	RET (ENSNVIG00000020085)	CSGALNACT2 (ENSNVIG00000020069)	RASGEF1A (ENSNVIG00000020041)	ENSNVIG00000020021	HNRNPF (ENSNVIG00000019999)	ZNF239 (ENSNVIG00000019977)	ZNF32 (ENSNVIG00000019922)	CXCL12 (ENSNVIG00000019903)	TMEM72 (ENSNVIG00000019859)
Ferret	MODERN SPECIES	187	ENSMPUG00000017215	HHEX (ENSMPUG00000017219)	KIF11 (ENSMPUG00000017220) #10	IDE (ENSMPUG00000017221) #11	MARCHF5 (ENSMPUG00000017226) #12	CPEB3 (ENSMPUG00000017227) #13	BTAF1 (ENSMPUG00000017228) #14	FGFBP3 (ENSMPUG00000020135) #15	TNKS2 (ENSMPUG00000017232) #16	PPP1R3C (ENSMPUG00000017235) #17	HECTD2 (ENSMPUG00000017236) #18	PCGF5 (ENSMPUG00000017239) #19	ENSMPUG00000017240	ANKRD1 (ENSMPUG00000017242) #20	RPP30 (ENSMPUG00000017258) #21	HTR7 (ENSMPUG00000017260) #22	KIF20B (ENSMPUG00000017262) #23	PANK1 (ENSMPUG00000017268) #24	SLC16A12 (ENSMPUG00000017273) #25	IFIT5 (ENSMPUG00000017274) ##26	ENSMPUG00000017275	BMS1 (ENSMPUG00000017276)	RET (ENSMPUG00000017277)	CSGALNACT2 (ENSMPUG00000017278)	RASGEF1A (ENSMPUG00000017281)	HNRNPF (ENSMPUG00000017283)	FXYD4 (ENSMPUG00000017285)	ENSMPUG00000017292	ENSMPUG00000017294	ZNF239 (ENSMPUG00000020136)	ZNF32 (ENSMPUG00000017296)
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00390000007844.d.b	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000014056
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00390000007844.d.b	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000162764.A.a.a	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Dog	MODERN SPECIES	20	IDE (ENSCAFG00845030157) #11	MARCHF5 (ENSCAFG00845030038) #12	CPEB3 (ENSCAFG00845029945) #13	BTAF1 (ENSCAFG00845029828) #14	ENSCAFG00845029761	FGFBP3 (ENSCAFG00845029747) #15	TNKS2 (ENSCAFG00845029629) #16	ENSCAFG00845029588	PPP1R3C (ENSCAFG00845029564) #17	HECTD2 (ENSCAFG00845029473) #18	ENSCAFG00845029412	PCGF5 (ENSCAFG00845029332) #19	ENSCAFG00845029267	ANKRD1 (ENSCAFG00845029233) #20	RPP30 (ENSCAFG00845029161) #21	HTR7 (ENSCAFG00845029113) #22	KIF20B (ENSCAFG00845028669) #23	PANK1 (ENSCAFG00845028503) #24	ENSCAFG00845028455	SLC16A12 (ENSCAFG00845028413) #25	ENSCAFG00845028375 ##26	ENSCAFG00845028316	ENSCAFG00845028268	RET (ENSCAFG00845027877)	CSGALNACT2 (ENSCAFG00845027662)	RASGEF1A (ENSCAFG00845027425)	FXYD4 (ENSCAFG00845027267)	HNRNPF (ENSCAFG00845027205)	ZNF239 (ENSCAFG00845027097)	ZNF485 (ENSCAFG00845026946)	ZNF32 (ENSCAFG00845026885)
Dingo	MODERN SPECIES	165	IDE (ENSCAFG00020002136) #11	MARCHF5 (ENSCAFG00020002121) #12	CPEB3 (ENSCAFG00020001981) #13	BTAF1 (ENSCAFG00020001875) #14	ENSCAFG00020001865	FGFBP3 (ENSCAFG00020001860) #15	TNKS2 (ENSCAFG00020000625) #16	ENSCAFG00020000432	ENSCAFG00020000408	PPP1R3C (ENSCAFG00020000403) #17	HECTD2 (ENSCAFG00020000395) #18	PCGF5 (ENSCAFG00020000355) #19	ENSCAFG00020000337	ANKRD1 (ENSCAFG00020000278) #20	RPP30 (ENSCAFG00020000258) #21	HTR7 (ENSCAFG00020000145) #22	KIF20B (ENSCAFG00020025310) #23	ENSCAFG00020025289 #24	ENSCAFG00020025288	SLC16A12 (ENSCAFG00020025287) #25	IFIT5 (ENSCAFG00020025285) ##26	ENSCAFG00020025284	BMS1 (ENSCAFG00020025282)	RET (ENSCAFG00020025280)	CSGALNACT2 (ENSCAFG00020025278)	RASGEF1A (ENSCAFG00020025268)	ENSCAFG00020025263	ZNF239 (ENSCAFG00020025257)	ZNF485 (ENSCAFG00020025254)	ZNF32 (ENSCAFG00020025251)	CXCL12 (ENSCAFG00020025246)
Red fox	MODERN SPECIES		ENSVVUG00000021330	PANK1 (ENSVVUG00000021332) #24	ENSVVUG00000021335	KIF20B (ENSVVUG00000021348) #23	MARCH5 (ENSVVUG00000021366) #12	CPEB3 (ENSVVUG00000021375) #13	BTAF1 (ENSVVUG00000021393) #14	ENSVVUG00000021424	TNKS2 (ENSVVUG00000021474) #16	PPP1R3C (ENSVVUG00000021674) #17	HECTD2 (ENSVVUG00000021690) #18	PCGF5 (ENSVVUG00000021778) #19	ENSVVUG00000021780	ANKRD1 (ENSVVUG00000021783) #20	RPP30 (ENSVVUG00000021784) #21	HTR7 (ENSVVUG00000021785) #22	IDE (ENSVVUG00000021801) #11	KIF11 (ENSVVUG00000021817) #10	HHEX (ENSVVUG00000021820)	ENSVVUG00000021821	EXOC6 (ENSVVUG00000021823) #8	CYP26C1 (ENSVVUG00000021827) #7	CYP26A1 (ENSVVUG00000021829) ##7	MYOF (ENSVVUG00000021838)	CEP55 (ENSVVUG00000022022)	FFAR4 (ENSVVUG00000022026)	PDE6C (ENSVVUG00000022083)	FRA10AC1 (ENSVVUG00000022487)	LGI1 (ENSVVUG00000022494)	SLC35G1 (ENSVVUG00000022508)	PLCE1 (ENSVVUG00000022530)
Felidae	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
Panthera	ANCESTRAL SPECIES	8	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
lion	MODERN SPECIES	11	CYP26C1 (ENSPLOG00000013983) #7	EXOC6 (ENSPLOG00000014159) #8	KIF11 (ENSPLOG00000014907) #10	IDE (ENSPLOG00000015191) #11	MARCHF5 (ENSPLOG00000015645) #12	CPEB3 (ENSPLOG00000015692) #13	BTAF1 (ENSPLOG00000015848) #14	FGFBP3 (ENSPLOG00000016161) #15	TNKS2 (ENSPLOG00000016200) #16	PPP1R3C (ENSPLOG00000016295) #17	HECTD2 (ENSPLOG00000016373) #18	PCGF5 (ENSPLOG00000016767) #19	ENSPLOG00000016807	ANKRD1 (ENSPLOG00000016826) #20	RPP30 (ENSPLOG00000016920) #21	HTR7 (ENSPLOG00000016954) #22	KIF20B (ENSPLOG00000017030) #23	PANK1 (ENSPLOG00000017128) #24	SLC16A12 (ENSPLOG00000017332) #25	ENSPLOG00000017375 ##26	BMS1 (ENSPLOG00000017414)	RET (ENSPLOG00000017480)	CSGALNACT2 (ENSPLOG00000017754)	RASGEF1A (ENSPLOG00000017794)	ENSPLOG00000017950	ENSPLOG00000017996	ZNF485 (ENSPLOG00000018025)	ZNF32 (ENSPLOG00000018063)	CXCL12 (ENSPLOG00000018193)	TMEM72 (ENSPLOG00000018265)	RASSF4 (ENSPLOG00000018321)
leopard	MODERN SPECIES	11	HHEX (ENSPPRG00000013009)	KIF11 (ENSPPRG00000014048) #10	IDE (ENSPPRG00000014274) #11	MARCHF5 (ENSPPRG00000014562) #12	CPEB3 (ENSPPRG00000015654) #13	BTAF1 (ENSPPRG00000018032) #14	FGFBP3 (ENSPPRG00000021085) #15	TNKS2 (ENSPPRG00000019676) #16	ENSPPRG00000020049 #17	ENSPPRG00000020690 #17	HECTD2 (ENSPPRG00000023104) #18	PCGF5 (ENSPPRG00000022835) #19	ENSPPRG00000022798	ANKRD1 (ENSPPRG00000022651) #20	RPP30 (ENSPPRG00000000115) #21	HTR7 (ENSPPRG00000000177) #22	KIF20B (ENSPPRG00000000421) #23	PANK1 (ENSPPRG00000000506) #24	SLC16A12 (ENSPPRG00000000621) #25	IFIT5 (ENSPPRG00000000707) ##26	BMS1 (ENSPPRG00000001311)	RET (ENSPPRG00000001685)	CSGALNACT2 (ENSPPRG00000001896)	RASGEF1A (ENSPPRG00000002016)	ENSPPRG00000002082	ENSPPRG00000002179	HNRNPF (ENSPPRG00000021222)	ZNF485 (ENSPPRG00000002559)	ZNF32 (ENSPPRG00000002792)	ENSPPRG00000021238	CXCL12 (ENSPPRG00000002910)
Tiger	MODERN SPECIES	135	BMS1 (ENSPTIG00000009652)	ENSPTIG00000010030	ENSPTIG00000009696 ##26	SLC16A12 (ENSPTIG00000010311) #25	PANK1 (ENSPTIG00000010408) #24	KIF20B (ENSPTIG00000010666) #23	MARCHF5 (ENSPTIG00000011726) #12	CPEB3 (ENSPTIG00000012018) #13	BTAF1 (ENSPTIG00000012653) #14	TNKS2 (ENSPTIG00000013504) #16	PPP1R3C (ENSPTIG00000013722) #17	HECTD2 (ENSPTIG00000013967) #18	PCGF5 (ENSPTIG00000014512) #19	ANKRD1 (ENSPTIG00000014828) #20	RPP30 (ENSPTIG00000014949) #21	HTR7 (ENSPTIG00000015045) #22
Cat	MODERN SPECIES	242	EXOC6 (ENSFCAG00000009932) #8	HHEX (ENSFCAG00000023875)	KIF11 (ENSFCAG00000006217) #10	IDE (ENSFCAG00000026411) #11	MARCHF5 (ENSFCAG00000034434) #12	CPEB3 (ENSFCAG00000032380) #13	BTAF1 (ENSFCAG00000000917) #14	FGFBP3 (ENSFCAG00000044895) #15	TNKS2 (ENSFCAG00000014953) #16	PPP1R3C (ENSFCAG00000009469) #17	HECTD2 (ENSFCAG00000022061) #18	PCGF5 (ENSFCAG00000045620) #19	ENSFCAG00000032188	ANKRD1 (ENSFCAG00000015725) #20	RPP30 (ENSFCAG00000029073) #21	HTR7 (ENSFCAG00000008544) #22	KIF20B (ENSFCAG00000041859) #23	PANK1 (ENSFCAG00000015455) #24	SLC16A12 (ENSFCAG00000000345) #25	ENSFCAG00000007421 ##26	ENSFCAG00000052328	BMS1 (ENSFCAG00000011220)	RET (ENSFCAG00000012999)	CSGALNACT2 (ENSFCAG00000013971)	RASGEF1A (ENSFCAG00000013972)	ENSFCAG00000042147	HNRNPF (ENSFCAG00000028219)	ENSFCAG00000026543	ZNF239 (ENSFCAG00000023538)	ZNF485 (ENSFCAG00000038778)	ZNF32 (ENSFCAG00000036973)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a #22
Common shrew	MODERN SPECIES	3448																HTR7 (ENSSARG00000001461) #22
Hedgehog	MODERN SPECIES	12436																HTR7 (ENSEEUG00000015813) #22
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Elephant	MODERN SPECIES	3	CYP26A1 (ENSLAFG00000022854) ##7	CYP26C1 (ENSLAFG00000006139) #7	EXOC6 (ENSLAFG00000003000) #8	HHEX (ENSLAFG00000005359)	KIF11 (ENSLAFG00000015454) #10	IDE (ENSLAFG00000006050) #11	MARCHF5 (ENSLAFG00000018718) #12	CPEB3 (ENSLAFG00000018716) #13	BTAF1 (ENSLAFG00000018710) #14	TNKS2 (ENSLAFG00000018705) #16	PPP1R3C (ENSLAFG00000027101) #17	HECTD2 (ENSLAFG00000003172) #18	PCGF5 (ENSLAFG00000011154) #19	ANKRD1 (ENSLAFG00000015939) #20	RPP30 (ENSLAFG00000015931) #21	HTR7 (ENSLAFG00000015928) #22	KIF20B (ENSLAFG00000004622) #23	PANK1 (ENSLAFG00000015729) #24	SLC16A12 (ENSLAFG00000022778) #25	IFIT5 (ENSLAFG00000011455) ##26	ENSLAFG00000028666 #26	ENSLAFG00000008208 #26	IFIT3 (ENSLAFG00000008209) #28	LIPA (ENSLAFG00000001585) #32	CH25H (ENSLAFG00000001587) #33	ENSLAFG00000029850	ENSLAFG00000000911 #34	ACTA2 (ENSLAFG00000000910) #35	STAMBPL1 (ENSLAFG00000017066) #36	ANKRD22 (ENSLAFG00000030797) #37	LIPM (ENSLAFG00000017061)
Tenrec	MODERN SPECIES	4342														ANKRD1 (ENSETEG00000018827) #20	RPP30 (ENSETEG00000018823) #21	HTR7 (ENSETEG00000018822) #22
Xenarthra	ANCESTRAL SPECIES	88	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22
Armadillo	MODERN SPECIES	687	KIF11 (ENSDNOG00000017304) #10	IDE (ENSDNOG00000033551) #11	ENSDNOG00000035343	MARCHF5 (ENSDNOG00000019722) #12	CPEB3 (ENSDNOG00000048639) #13	BTAF1 (ENSDNOG00000002856) #14	ENSDNOG00000040849	FGFBP3 (ENSDNOG00000033896) #15	TNKS2 (ENSDNOG00000017651) #16	ENSDNOG00000047235	PPP1R3C (ENSDNOG00000045054) #17	HECTD2 (ENSDNOG00000019588) #18	PCGF5 (ENSDNOG00000005789) #19	ANKRD1 (ENSDNOG00000046981) #20	RPP30 (ENSDNOG00000010186) #21	HTR7 (ENSDNOG00000024730) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00950000182946.d.b #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a.f	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035
koala	MODERN SPECIES	150	CYP26C1 (ENSPCIG00000012635) #7	EXOC6 (ENSPCIG00000012627) #8	ENSPCIG00000012624 #9	KIF11 (ENSPCIG00000012620) #10	IDE (ENSPCIG00000017309) #11	MARCHF5 (ENSPCIG00000017306) #12	CPEB3 (ENSPCIG00000017302) #13	BTAF1 (ENSPCIG00000017290) #14	FGFBP3 (ENSPCIG00000017289) #15	TNKS2 (ENSPCIG00000016784) #16	PPP1R3C (ENSPCIG00000016762) #17	HECTD2 (ENSPCIG00000016760) #18	PCGF5 (ENSPCIG00000009625) #19	ANKRD1 (ENSPCIG00000015723) #20	RPP30 (ENSPCIG00000015730) #21	HTR7 (ENSPCIG00000015740) #22	ENSPCIG00000015744	KIF20B (ENSPCIG00000000668) #23	ENSPCIG00000034252 #24	ENSPCIG00000002392 #24	SLC16A12 (ENSPCIG00000009112) #25	ENSPCIG00000009119 ##26	ENSPCIG00000009121 ##26	ENSPCIG00000009123 #26	ENSPCIG00000009126 #26	CHST15 (ENSPCIG00000014522)	ENSPCIG00000028203	CPXM2 (ENSPCIG00000026833)	GPR26 (ENSPCIG00000026831)	ENSPCIG00000026830	ENSPCIG00000025845
Common wonbat	MODERN SPECIES	1067	CYP26A1 (ENSVURG00010019199) ##7	CYP26C1 (ENSVURG00010019158) #7	EXOC6 (ENSVURG00010019125) #8	ENSVURG00010019109 #9	KIF11 (ENSVURG00010019086) #10	IDE (ENSVURG00010019043) #11	MARCHF5 (ENSVURG00010019028) #12	CPEB3 (ENSVURG00010018925) #13	BTAF1 (ENSVURG00010018888) #14	TNKS2 (ENSVURG00010018866) #16	PPP1R3C (ENSVURG00010018860) #17	HECTD2 (ENSVURG00010018846) #18	PCGF5 (ENSVURG00010018839) #19	ANKRD1 (ENSVURG00010018832) #20	ENSVURG00010018823 #21	HTR7 (ENSVURG00010018822) #22	ENSVURG00010018819	ENSVURG00010018818	KIF20B (ENSVURG00010018810) #23	PANK1 (ENSVURG00010018800) #24	SLC16A12 (ENSVURG00010018792) #25	ENSVURG00010018787 ##26	ENSVURG00010018781 ##26	ENSVURG00010018780 #26	ENSVURG00010018775 #26	CHST15 (ENSVURG00010018756)	CPXM2 (ENSVURG00010018730)	GPR26 (ENSVURG00010018721)	ENSVURG00010018711	ACADSB (ENSVURG00010018698)	IKZF5 (ENSVURG00010018688)
Wallaby	MODERN SPECIES	5543																HTR7 (ENSMEUG00000006311) #22
Tasmanian devil	MODERN SPECIES	1	CYP26A1 (ENSSHAG00000017722) ##7	EXOC6 (ENSSHAG00000017753) #8	ENSSHAG00000024907 #9	KIF11 (ENSSHAG00000018218) #10	IDE (ENSSHAG00000018317) #11	MARCHF5 (ENSSHAG00000018432) #12	ENSSHAG00000028730	BTAF1 (ENSSHAG00000018664) #14	FGFBP3 (ENSSHAG00000028760) #15	TNKS2 (ENSSHAG00000018767) #16	PPP1R3C (ENSSHAG00000018833) #17	HECTD2 (ENSSHAG00000018873) #18	PCGF5 (ENSSHAG00000032079) #19	ANKRD1 (ENSSHAG00000007323) #20	RPP30 (ENSSHAG00000007452) #21	HTR7 (ENSSHAG00000007861) #22	ENSSHAG00000027737	KIF20B (ENSSHAG00000013656) #23	PANK1 (ENSSHAG00000014245) #24	SLC16A12 (ENSSHAG00000014683) #25	ENSSHAG00000021228 ##26	ENSSHAG00000002618 ##26	ENSSHAG00000001370 #26	ENSSHAG00000009520	CPXM2 (ENSSHAG00000023947)	GPR26 (ENSSHAG00000030669)	BUB3 (ENSSHAG00000010372)	HMX2 (ENSSHAG00000029091)	HMX3 (ENSSHAG00000031226)	ACADSB (ENSSHAG00000000928)	IKZF5 (ENSSHAG00000011508)
Opossum	MODERN SPECIES		CYP26A1 (ENSMODG00000006344) ##7	CYP26C1 (ENSMODG00000038230) #7	EXOC6 (ENSMODG00000006431) #8	ENSMODG00000006444 #9	KIF11 (ENSMODG00000006467) #10	ENSMODG00000006630 #11	MARCHF5 (ENSMODG00000006639) #12	ENSMODG00000051467	CPEB3 (ENSMODG00000006673) #13	BTAF1 (ENSMODG00000006697) #14	TNKS2 (ENSMODG00000006738) #16	PPP1R3C (ENSMODG00000006750) #17	HECTD2 (ENSMODG00000006780) #18	PCGF5 (ENSMODG00000006798) #19	ANKRD1 (ENSMODG00000006827) #20	HTR7 (ENSMODG00000006874) #22	ENSMODG00000024887	KIF20B (ENSMODG00000007283) #23	PANK1 (ENSMODG00000007301) #24	SLC16A12 (ENSMODG00000007350) #25	ENSMODG00000045416	ENSMODG00000007358 ##26	ENSMODG00000024882 ##26	ENSMODG00000038857 #26	CHST15 (ENSMODG00000007407)	CPXM2 (ENSMODG00000007502)	GPR26 (ENSMODG00000007533)	ENSMODG00000007542	HMX2 (ENSMODG00000007548)	HMX3 (ENSMODG00000007552)	ACADSB (ENSMODG00000007778)
Platypus	MODERN SPECIES	14	TMEM254 (ENSOANG00000019840)	ENSOANG00000047618	BMS1 (ENSOANG00000000662)	ENSOANG00000032096	RET (ENSOANG00000046180)	CSGALNACT2 (ENSOANG00000003169)	RASGEF1A (ENSOANG00000003170)	SFTPD (ENSOANG00000003173)	ENSOANG00000044423	ENSOANG00000003183	ENSOANG00000043159	PPP1R3C (ENSOANG00000040004) #17	HECTD2 (ENSOANG00000011999) #18	ANKRD1 (ENSOANG00000012001) #20	RPP30 (ENSOANG00000003415) #21	HTR7 (ENSOANG00000016001) #22	KIF20B (ENSOANG00000000743) #23	PANK1 (ENSOANG00000000745) #24	SLC16A12 (ENSOANG00000001086) #25	ENSOANG00000007390 #26	LIPA (ENSOANG00000047066) #32	CH25H (ENSOANG00000002397) #33	ENSOANG00000041139 #34	ACTA2 (ENSOANG00000000346) #35	STAMBPL1 (ENSOANG00000000463) #36	ANKRD22 (ENSOANG00000000465) #37	LIPM (ENSOANG00000000469)	ENSOANG00000019910	ENSOANG00000028726	ENSOANG00000039712	ATAD1 (ENSOANG00000008207)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438.a	ENSGT00940000156860.a.b.b
tuatara	MODERN SPECIES	1752									TNKS2 (ENSSPUG00000000832) #16	PPP1R3C (ENSSPUG00000000826) #17	HECTD2 (ENSSPUG00000000797) #18	PCGF5 (ENSSPUG00000000770) #19	ENSSPUG00000000756	ANKRD1 (ENSSPUG00000000739) #20	RPP30 (ENSSPUG00000000595) #21	HTR7 (ENSSPUG00000000584) #22	KIF20B (ENSSPUG00000000243) #23	ENSSPUG00000000146	PANK1 (ENSSPUG00000000111) #24	SLC16A12 (ENSSPUG00000000091) #25	ENSSPUG00000000082 #26	ENSSPUG00000000076 #26	ENSSPUG00000000073 #26	LIPA (ENSSPUG00000000064) #32	FAS (ENSSPUG00000019171) #34	ENSSPUG00000019169 #35	STAMBPL1 (ENSSPUG00000019163) #36	ANKRD22 (ENSSPUG00000019159) #37	ENSSPUG00000019158	ENSSPUG00000019155
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b
Laterata	ANCESTRAL SPECIES		ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438.a
Argentine black and white tegu	MODERN SPECIES	22	PDE6C (ENSSMRG00000013442)	FRA10AC1 (ENSSMRG00000013441)	LGI1 (ENSSMRG00000013440)	SLC35G1 (ENSSMRG00000013438)	PLCE1 (ENSSMRG00000013435)	NOC3L (ENSSMRG00000013433)	TBC1D12 (ENSSMRG00000013431)	ENSSMRG00000013430	FGFBP3 (ENSSMRG00000013429) #15	TNKS2 (ENSSMRG00000013428) #16	PPP1R3C (ENSSMRG00000013426) #17	HECTD2 (ENSSMRG00000013423) #18	PCGF5 (ENSSMRG00000013420) #19	ANKRD1 (ENSSMRG00000013418) #20	RPP30 (ENSSMRG00000013417) #21	HTR7 (ENSSMRG00000013413) #22	KIF20B (ENSSMRG00000013410) #23	ENSSMRG00000013409	PANK1 (ENSSMRG00000013407) #24	SLC16A12 (ENSSMRG00000013406) #25	ENSSMRG00000013402	ENSSMRG00000013400 #26	LIPA (ENSSMRG00000013398) #32	CH25H (ENSSMRG00000013396) #33	ACTA2 (ENSSMRG00000013394) #35	STAMBPL1 (ENSSMRG00000013392) #36	ANKRD22 (ENSSMRG00000013390) #37	ENSSMRG00000012970	ENSSMRG00000012969	ENSSMRG00000012900	ENSSMRG00000012880
Common wall lizard	MODERN SPECIES	13	SLC35G1 (ENSPMRG00000001844)	ENSPMRG00000001839	PLCE1 (ENSPMRG00000001736)	NOC3L (ENSPMRG00000001627)	TBC1D12 (ENSPMRG00000001590)	ENSPMRG00000001574	FGFBP3 (ENSPMRG00000001566) #15	TNKS2 (ENSPMRG00000001393) #16	PPP1R3C (ENSPMRG00000001310) #17	HECTD2 (ENSPMRG00000001273) #18	ENSPMRG00000001239	PCGF5 (ENSPMRG00000001220) #19	ENSPMRG00000001192 #20	ENSPMRG00000001183	RPP30 (ENSPMRG00000001121) #21	HTR7 (ENSPMRG00000001074) #22	KIF20B (ENSPMRG00000000706) #23	PANK1 (ENSPMRG00000000570) #24	SLC16A12 (ENSPMRG00000000542) #25	ENSPMRG00000000513	ENSPMRG00000000499 #26	ENSPMRG00000000485 #26	ENSPMRG00000000429 #32	ENSPMRG00000000388	ENSPMRG00000000355 #32	ENSPMRG00000000253 #32	ENSPMRG00000006398 #32	ENSPMRG00000006385 #32	ENSPMRG00000006303 #32	CH25H (ENSPMRG00000006293) #33	ENSPMRG00000006288
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b
Lizard	MODERN SPECIES	833	SLC35G1 (ENSACAG00000007395)	PLCE1 (ENSACAG00000007404)	NOC3L (ENSACAG00000007551)	ENSACAG00000041124	ENSACAG00000007669	ENSACAG00000007745	FGFBP3 (ENSACAG00000007760) #15	TNKS2 (ENSACAG00000007762) #16	PPP1R3C (ENSACAG00000007886) #17	ENSACAG00000041911	HECTD2 (ENSACAG00000007890) #18	ENSACAG00000044420	PCGF5 (ENSACAG00000007900) #19	ANKRD1 (ENSACAG00000044654) #20	RPP30 (ENSACAG00000007996) #21	HTR7 (ENSACAG00000029017) #22	ENSACAG00000043905	ENSACAG00000042500	ENSACAG00000036669	ENSACAG00000036883	ENSACAG00000037376	KIF20B (ENSACAG00000008048) #23	ENSACAG00000044753	PANK1 (ENSACAG00000008075) #24
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000017833	ENSGT00990000211832	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.b #32	ENSGT00940000154696.gb.a #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a
Indian cobra	MODERN SPECIES	3	FRA10AC1 (ENSNNAG00000011395)	ENSNNAG00000011379	LGI1 (ENSNNAG00000011355)	SLC35G1 (ENSNNAG00000011342)	PLCE1 (ENSNNAG00000010597)	NOC3L (ENSNNAG00000009974)	TBC1D12 (ENSNNAG00000009855)	ENSNNAG00000009828	FGFBP3 (ENSNNAG00000009763) #15	TNKS2 (ENSNNAG00000009566) #16	PPP1R3C (ENSNNAG00000009545) #17	HECTD2 (ENSNNAG00000009393) #18	PCGF5 (ENSNNAG00000009358) #19	ANKRD1 (ENSNNAG00000009331) #20	RPP30 (ENSNNAG00000009305) #21	HTR7 (ENSNNAG00000009244) #22	ENSNNAG00000009212 #23	PANK1 (ENSNNAG00000009170) #24	SLC16A12 (ENSNNAG00000009144) #25	ENSNNAG00000009120 #26	ENSNNAG00000008968	ENSNNAG00000008946 #26	ENSNNAG00000008927 #26	ENSNNAG00000008543 #26	ENSNNAG00000008448 #26	ENSNNAG00000008361 #32	ENSNNAG00000008217 #32	ENSNNAG00000007892 #32	CH25H (ENSNNAG00000007871) #33	FAS (ENSNNAG00000007833) #34	ACTA2 (ENSNNAG00000007755) #35
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000017833	ENSGT00990000211832	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.a #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a	ENSGT00940000156860.b
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.a.a #32	ENSGT00940000154696.gb.a.b #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a
Eastern brown snake	MODERN SPECIES	48	FRA10AC1 (ENSPTXG00000015469)	ENSPTXG00000015473	ENSPTXG00000015474	SLC35G1 (ENSPTXG00000015477)	PLCE1 (ENSPTXG00000015483)	NOC3L (ENSPTXG00000015774)	TBC1D12 (ENSPTXG00000015782)	ENSPTXG00000015783	FGFBP3 (ENSPTXG00000015785) #15	TNKS2 (ENSPTXG00000015787) #16	PPP1R3C (ENSPTXG00000015788) #17	HECTD2 (ENSPTXG00000015789) #18	PCGF5 (ENSPTXG00000015793) #19	ANKRD1 (ENSPTXG00000015794) #20	RPP30 (ENSPTXG00000015797) #21	HTR7 (ENSPTXG00000015804) #22	KIF20B (ENSPTXG00000015821) #23	ENSPTXG00000015857	PANK1 (ENSPTXG00000015861) #24	SLC16A12 (ENSPTXG00000015866) #25	ENSPTXG00000015871 #26	ENSPTXG00000015873	ENSPTXG00000015874 #26	ENSPTXG00000015875 #32	ENSPTXG00000015876 #32	CH25H (ENSPTXG00000015878) #33	ACTA2 (ENSPTXG00000015879) #35	STAMBPL1 (ENSPTXG00000015880) #36	ANKRD22 (ENSPTXG00000015881) #37	ENSPTXG00000015882	ENSPTXG00000016125
Mainland tiger snake	MODERN SPECIES	34	FRA10AC1 (ENSNSUG00000013043)	LGI1 (ENSNSUG00000013044)	SLC35G1 (ENSNSUG00000013045)	PLCE1 (ENSNSUG00000013046)	NOC3L (ENSNSUG00000013047)	TBC1D12 (ENSNSUG00000013054)	ENSNSUG00000013066	FGFBP3 (ENSNSUG00000013067) #15	TNKS2 (ENSNSUG00000013068) #16	ENSNSUG00000013636	PPP1R3C (ENSNSUG00000013638) #17	HECTD2 (ENSNSUG00000013640) #18	PCGF5 (ENSNSUG00000013641) #19	ANKRD1 (ENSNSUG00000013642) #20	RPP30 (ENSNSUG00000013643) #21	HTR7 (ENSNSUG00000013645) #22	ENSNSUG00000013647 #23	ENSNSUG00000013648	PANK1 (ENSNSUG00000013649) #24	SLC16A12 (ENSNSUG00000013651) #25	ENSNSUG00000013652 #26	ENSNSUG00000013654
Blue-lipped sea krait	MODERN SPECIES	3198																HTR7 (ENSLLTG00000001580) #22
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Chinese turtle	MODERN SPECIES	963													ENSPSIG00000000669	ANKRD1 (ENSPSIG00000012579) #20	RPP30 (ENSPSIG00000013213) #21	HTR7 (ENSPSIG00000015480) #22	ENSPSIG00000015654 #23	ENSPSIG00000015735 #23	ENSPSIG00000016505	PANK1 (ENSPSIG00000016510) #24	SLC16A12 (ENSPSIG00000016642) #25	ENSPSIG00000000678 #26	LIPA (ENSPSIG00000016953) #32	CH25H (ENSPSIG00000000687) #33	FAS (ENSPSIG00000005528) #34	ACTA2 (ENSPSIG00000006143) #35	STAMBPL1 (ENSPSIG00000006150) #36	ANKRD22 (ENSPSIG00000006757) #37	ENSPSIG00000007094	ENSPSIG00000007101	ENSPSIG00000007218
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000154696.s.a #32
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.n #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000154696.s.a #32
Abingdon island giant tortoise	MODERN SPECIES	2661													PCGF5 (ENSCABG00000006677) #19	ANKRD1 (ENSCABG00000006679) #20	RPP30 (ENSCABG00000006682) #21	HTR7 (ENSCABG00000006684) #22	ENSCABG00000006685
Goode s thornscrub tortoise	MODERN SPECIES	21	PDE6C (ENSGEVG00005019822)	FRA10AC1 (ENSGEVG00005019863)	ENSGEVG00005019878	ENSGEVG00005019892	SLC35G1 (ENSGEVG00005019900)	PLCE1 (ENSGEVG00005019913)	NOC3L (ENSGEVG00005019934)	TBC1D12 (ENSGEVG00005019947)	TNKS2 (ENSGEVG00005005969) #16	PPP1R3C (ENSGEVG00005006048) #17	ENSGEVG00005006071 #18	ENSGEVG00005006118 #18	PCGF5 (ENSGEVG00005006190) #19	ANKRD1 (ENSGEVG00005006219) #20	RPP30 (ENSGEVG00005006258) #21	HTR7 (ENSGEVG00005006286) #22	KIF20B (ENSGEVG00005006327) #23	PANK1 (ENSGEVG00005006448) #24	SLC16A12 (ENSGEVG00005006580) #25	ENSGEVG00005006637 #26	LIPA (ENSGEVG00005006714) #32	CH25H (ENSGEVG00005007093) #33	FAS (ENSGEVG00005007132) #34	ACTA2 (ENSGEVG00005007170) #35	STAMBPL1 (ENSGEVG00005007213) #36	ANKRD22 (ENSGEVG00005007356) #37	ENSGEVG00005007381	ENSGEVG00005007517	ENSGEVG00005007595	ENSGEVG00005007655	ENSGEVG00005007700
Emydidae	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438
Three-toed box turtle	MODERN SPECIES	39	RBP4 (ENSTMTG00000020849)	PDE6C (ENSTMTG00000020867)	FRA10AC1 (ENSTMTG00000020941)	ENSTMTG00000020958	ENSTMTG00000020982	SLC35G1 (ENSTMTG00000020988)	PLCE1 (ENSTMTG00000021028)	NOC3L (ENSTMTG00000021253)	TBC1D12 (ENSTMTG00000021340)	TNKS2 (ENSTMTG00000021618) #16	PPP1R3C (ENSTMTG00000021638) #17	HECTD2 (ENSTMTG00000021643) #18	PCGF5 (ENSTMTG00000021655) #19	ANKRD1 (ENSTMTG00000021665) #20	RPP30 (ENSTMTG00000021670) #21	HTR7 (ENSTMTG00000021674) #22	KIF20B (ENSTMTG00000021701) #23	ENSTMTG00000021790	ENSTMTG00000021794	PANK1 (ENSTMTG00000021801) #24	SLC16A12 (ENSTMTG00000021807) #25	ENSTMTG00000021813 #26	LIPA (ENSTMTG00000021818) #32	CH25H (ENSTMTG00000021822) #33	FAS (ENSTMTG00000021830) #34	ACTA2 (ENSTMTG00000021837) #35	STAMBPL1 (ENSTMTG00000021843) #36	ANKRD22 (ENSTMTG00000021855) #37	ENSTMTG00000021864	ENSTMTG00000021879	ENSTMTG00000021903
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1636																ENSCPBG00000008215 #22
painted turtle	MODERN SPECIES	744	FRA10AC1 (ENSCPBG00000026545)	LGI1 (ENSCPBG00000026544)	SLC35G1 (ENSCPBG00000026543)	ENSCPBG00000026541	ZNF513 (ENSCPBG00000026540)	PLCE1 (ENSCPBG00000026539)	NOC3L (ENSCPBG00000026538)	TBC1D12 (ENSCPBG00000026536)	FGFBP3 (ENSCPBG00000026534) #15	TNKS2 (ENSCPBG00000026533) #16	PPP1R3C (ENSCPBG00000026530) #17	HECTD2 (ENSCPBG00000026524) #18	PCGF5 (ENSCPBG00000026522) #19	ANKRD1 (ENSCPBG00000026520) #20	RPP30 (ENSCPBG00000026518) #21	ENSCPBG00000026517 #22	ENSCPBG00000026515 #23	ENSCPBG00000026511 #23	ENSCPBG00000026510	ENSCPBG00000026509	PANK1 (ENSCPBG00000026507) #24	ENSCPBG00000026506	SLC16A12 (ENSCPBG00000026505) #25	ENSCPBG00000026504 #26	LIPA (ENSCPBG00000026503) #32	CH25H (ENSCPBG00000026502) #33	FAS (ENSCPBG00000026500) #34	ACTA2 (ENSCPBG00000026499) #35	STAMBPL1 (ENSCPBG00000026498) #36	ANKRD22 (ENSCPBG00000026497) #37	ENSCPBG00000026495
Archosauria	ANCESTRAL SPECIES	7	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Australian saltwater crocodile	MODERN SPECIES	68	PDE6C (ENSCPRG00005017106)	FRA10AC1 (ENSCPRG00005017118)	LGI1 (ENSCPRG00005017122)	SLC35G1 (ENSCPRG00005017127)	PLCE1 (ENSCPRG00005017134)	NOC3L (ENSCPRG00005017181)	TBC1D12 (ENSCPRG00005017223)	ENSCPRG00005017257	TNKS2 (ENSCPRG00005017332) #16	PPP1R3C (ENSCPRG00005017713) #17	HECTD2 (ENSCPRG00005017720) #18	PCGF5 (ENSCPRG00005017727) #19	ENSCPRG00005017737	ANKRD1 (ENSCPRG00005017742) #20	RPP30 (ENSCPRG00005017744) #21	HTR7 (ENSCPRG00005017749) #22	KIF20B (ENSCPRG00005017756) #23	PANK1 (ENSCPRG00005017765) #24	SLC16A12 (ENSCPRG00005017768) #25	ENSCPRG00005017770 #26	LIPA (ENSCPRG00005017773) #32	CH25H (ENSCPRG00005017776) #33	FAS (ENSCPRG00005017779) #34	ACTA2 (ENSCPRG00005017787) #35	STAMBPL1 (ENSCPRG00005017791) #36	ANKRD22 (ENSCPRG00005017798) #37	ENSCPRG00005017802	CXCL12 (ENSCPRG00005017813)	ERCC6 (ENSCPRG00005017820)	ENSCPRG00005017835	DRGX (ENSCPRG00005017838)
Aves	ANCESTRAL SPECIES	6	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
African ostrich	MODERN SPECIES	720	RBP4 (ENSSCUG00000017031)	PDE6C (ENSSCUG00000017033)	FRA10AC1 (ENSSCUG00000017035)	LGI1 (ENSSCUG00000017037)	SLC35G1 (ENSSCUG00000017039)	PLCE1 (ENSSCUG00000017041)	NOC3L (ENSSCUG00000017050)	ENSSCUG00000017063	ENSSCUG00000017070	TNKS2 (ENSSCUG00000017073) #16	PPP1R3C (ENSSCUG00000017086) #17	HECTD2 (ENSSCUG00000017089) #18	PCGF5 (ENSSCUG00000010388) #19	ANKRD1 (ENSSCUG00000010393) #20	RPP30 (ENSSCUG00000010395) #21	HTR7 (ENSSCUG00000010397) #22	KIF20B (ENSSCUG00000010400) #23	PANK1 (ENSSCUG00000010408) #24	SLC16A12 (ENSSCUG00000010419) #25	ENSSCUG00000010421 #26	LIPA (ENSSCUG00000010427) #32	CH25H (ENSSCUG00000010431) #33	FAS (ENSSCUG00000010433) #34	ACTA2 (ENSSCUG00000010434) #35	STAMBPL1 (ENSSCUG00000010436) #36	ANKRD22 (ENSSCUG00000010439) #37	ENSSCUG00000010440	TMEM72 (ENSSCUG00000010443)	CXCL12 (ENSSCUG00000010445)	ERCC6 (ENSSCUG00000010448)	ENSSCUG00000010454
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Great tit	MODERN SPECIES	26	RBP4 (ENSPMJG00000002895)	PDE6C (ENSPMJG00000002832)	FRA10AC1 (ENSPMJG00000002826)	LGI1 (ENSPMJG00000002818)	SLC35G1 (ENSPMJG00000002811)	PLCE1 (ENSPMJG00000002800)	NOC3L (ENSPMJG00000000749)	TBC1D12 (ENSPMJG00000000718)	ENSPMJG00000000715	TNKS2 (ENSPMJG00000000697) #16	PPP1R3C (ENSPMJG00000000690) #17	HECTD2 (ENSPMJG00000000588) #18	PCGF5 (ENSPMJG00000000534) #19	ANKRD1 (ENSPMJG00000000521) #20	RPP30 (ENSPMJG00000000509) #21	HTR7 (ENSPMJG00000000502) #22	KIF20B (ENSPMJG00000000150) #23	PANK1 (ENSPMJG00000016062) #24	SLC16A12 (ENSPMJG00000016061) #25	ENSPMJG00000016060 #26	LIPA (ENSPMJG00000016059) #32	FAS (ENSPMJG00000016057) #34	ACTA2 (ENSPMJG00000016056) #35	STAMBPL1 (ENSPMJG00000016055) #36	ANKRD22 (ENSPMJG00000016054) #37	ENSPMJG00000016053	ENSPMJG00000016052	TMEM72 (ENSPMJG00000016051)	CXCL12 (ENSPMJG00000016047)	ERCC6 (ENSPMJG00000016044)	ENSPMJG00000016043
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Flycatcher	MODERN SPECIES	25	PDE6C (ENSFALG00000007837)	FRA10AC1 (ENSFALG00000007827)	LGI1 (ENSFALG00000007822)	SLC35G1 (ENSFALG00000007820)	PLCE1 (ENSFALG00000007813)	NOC3L (ENSFALG00000007807)	ENSFALG00000007800	ENSFALG00000015069	TNKS2 (ENSFALG00000007782) #16	PPP1R3C (ENSFALG00000015051) #17	HECTD2 (ENSFALG00000007748) #18	ENSFALG00000027332	PCGF5 (ENSFALG00000007736) #19	ANKRD1 (ENSFALG00000007718) #20	RPP30 (ENSFALG00000007711) #21	HTR7 (ENSFALG00000007708) #22	KIF20B (ENSFALG00000007702) #23	PANK1 (ENSFALG00000009687) #24	SLC16A12 (ENSFALG00000007681) #25	ENSFALG00000007677 #26	LIPA (ENSFALG00000007674) #32	FAS (ENSFALG00000007670) #34	ACTA2 (ENSFALG00000007659) #35	STAMBPL1 (ENSFALG00000007656) #36	ANKRD22 (ENSFALG00000028208) #37	ENSFALG00000007646	ENSFALG00000007578	ENSFALG00000007576	ENSFALG00000007570	ERCC6 (ENSFALG00000007563)	ENSFALG00000007558
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Common canary	MODERN SPECIES	7	RBP4 (ENSSCAG00000016859)	PDE6C (ENSSCAG00000016861)	FRA10AC1 (ENSSCAG00000016865)	LGI1 (ENSSCAG00000016869)	SLC35G1 (ENSSCAG00000016870)	PLCE1 (ENSSCAG00000016878)	NOC3L (ENSSCAG00000016901)	TBC1D12 (ENSSCAG00000016920)	ENSSCAG00000016923	TNKS2 (ENSSCAG00000016994) #16	PPP1R3C (ENSSCAG00000017044) #17	HECTD2 (ENSSCAG00000017047) #18	PCGF5 (ENSSCAG00000017052) #19	ANKRD1 (ENSSCAG00000017059) #20	RPP30 (ENSSCAG00000017061) #21	HTR7 (ENSSCAG00000017063) #22	KIF20B (ENSSCAG00000017066) #23	PANK1 (ENSSCAG00000017068) #24	SLC16A12 (ENSSCAG00000017071) #25	ENSSCAG00000017073 #26	LIPA (ENSSCAG00000017074) #32	CH25H (ENSSCAG00000017076) #33	FAS (ENSSCAG00000017082) #34	ACTA2 (ENSSCAG00000017084) #35	STAMBPL1 (ENSSCAG00000017087) #36	ENSSCAG00000017088	ANKRD22 (ENSSCAG00000017090) #37	ENSSCAG00000017092	TMEM72 (ENSSCAG00000017094)	CXCL12 (ENSSCAG00000017096)	ERCC6 (ENSSCAG00000017103)
Zebra finch	MODERN SPECIES	28	RBP4 (ENSTGUG00000008768)	PDE6C (ENSTGUG00000008698)	FRA10AC1 (ENSTGUG00000008669)	LGI1 (ENSTGUG00000021343)	SLC35G1 (ENSTGUG00000021562)	PLCE1 (ENSTGUG00000008633)	NOC3L (ENSTGUG00000008590)	TBC1D12 (ENSTGUG00000008570)	ENSTGUG00000008568	TNKS2 (ENSTGUG00000008510) #16	PPP1R3C (ENSTGUG00000008508) #17	HECTD2 (ENSTGUG00000008456) #18	PCGF5 (ENSTGUG00000023549) #19	ANKRD1 (ENSTGUG00000008417) #20	RPP30 (ENSTGUG00000008399) #21	HTR7 (ENSTGUG00000008388) #22	KIF20B (ENSTGUG00000008375) #23	PANK1 (ENSTGUG00000008362) #24	SLC16A12 (ENSTGUG00000008356) #25	ENSTGUG00000008354 #26	LIPA (ENSTGUG00000008318) #32	CH25H (ENSTGUG00000008317) #33	FAS (ENSTGUG00000023740) #34	ACTA2 (ENSTGUG00000029588) #35	STAMBPL1 (ENSTGUG00000019247) #36	ENSTGUG00000021117	ANKRD22 (ENSTGUG00000008300) #37	ENSTGUG00000029151	ENSTGUG00000008255	TMEM72 (ENSTGUG00000019796)	CXCL12 (ENSTGUG00000025609)
Medium ground finch	MODERN SPECIES	3	RBP4 (ENSGFOG00000002310)	PDE6C (ENSGFOG00000002341)	FRA10AC1 (ENSGFOG00000002397)	LGI1 (ENSGFOG00000002412)	SLC35G1 (ENSGFOG00000002428)	PLCE1 (ENSGFOG00000002518)	NOC3L (ENSGFOG00000003364)	TBC1D12 (ENSGFOG00000003546)	ENSGFOG00000003611	TNKS2 (ENSGFOG00000003647) #16	PPP1R3C (ENSGFOG00000003798) #17	HECTD2 (ENSGFOG00000003819) #18	PCGF5 (ENSGFOG00000003951) #19	ANKRD1 (ENSGFOG00000003963) #20	RPP30 (ENSGFOG00000003989) #21	HTR7 (ENSGFOG00000004004) #22	KIF20B (ENSGFOG00000004017) #23	PANK1 (ENSGFOG00000004047) #24	SLC16A12 (ENSGFOG00000004063) #25	ENSGFOG00000004077 #26	LIPA (ENSGFOG00000004091) #32	CH25H (ENSGFOG00000004288) #33	FAS (ENSGFOG00000004302) #34	ACTA2 (ENSGFOG00000004337) #35	STAMBPL1 (ENSGFOG00000004341) #36	ENSGFOG00000004363	ANKRD22 (ENSGFOG00000004939) #37	ENSGFOG00000004980	ENSGFOG00000005450	TMEM72 (ENSGFOG00000005484)	CXCL12 (ENSGFOG00000005495)
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Golden eagle	MODERN SPECIES	2	RBP4 (ENSACCG00020005893)	PDE6C (ENSACCG00020005929)	FRA10AC1 (ENSACCG00020005976)	LGI1 (ENSACCG00020006010)	SLC35G1 (ENSACCG00020006026)	PLCE1 (ENSACCG00020006089)	NOC3L (ENSACCG00020006308)	TBC1D12 (ENSACCG00020006463)	ENSACCG00020006536	TNKS2 (ENSACCG00020006924) #16	PPP1R3C (ENSACCG00020007174) #17	HECTD2 (ENSACCG00020007194) #18	PCGF5 (ENSACCG00020007220) #19	ANKRD1 (ENSACCG00020007245) #20	RPP30 (ENSACCG00020007257) #21	HTR7 (ENSACCG00020007285) #22	KIF20B (ENSACCG00020007324) #23	PANK1 (ENSACCG00020007493) #24	SLC16A12 (ENSACCG00020007600) #25	ENSACCG00020007602 #26	LIPA (ENSACCG00020007615) #32	CH25H (ENSACCG00020007629) #33	FAS (ENSACCG00020007638) #34	ACTA2 (ENSACCG00020007655) #35	STAMBPL1 (ENSACCG00020007681) #36	ANKRD22 (ENSACCG00020007709) #37	ENSACCG00020007746	ENSACCG00020007776	ENSACCG00020007802	TMEM72 (ENSACCG00020007811)	CXCL12 (ENSACCG00020007820)
Kakapo	MODERN SPECIES	22	PDE6C (ENSSHBG00005010844)	FRA10AC1 (ENSSHBG00005010816)	LGI1 (ENSSHBG00005010775)	SLC35G1 (ENSSHBG00005010743)	PLCE1 (ENSSHBG00005010625)	NOC3L (ENSSHBG00005010458)	TBC1D12 (ENSSHBG00005010421)	ENSSHBG00005010379	FGFBP3 (ENSSHBG00005010365) #15	TNKS2 (ENSSHBG00005010339) #16	PPP1R3C (ENSSHBG00005000546) #17	HECTD2 (ENSSHBG00005000528) #18	PCGF5 (ENSSHBG00005000496) #19	ANKRD1 (ENSSHBG00005000487) #20	RPP30 (ENSSHBG00005004414) #21	HTR7 (ENSSHBG00005004405) #22	ENSSHBG00005004375 #23	ENSSHBG00005004358 #23	PANK1 (ENSSHBG00005004351) #24	SLC16A12 (ENSSHBG00005004347) #25	ENSSHBG00005004339 #26	LIPA (ENSSHBG00005004334) #32	CH25H (ENSSHBG00005004330) #33	FAS (ENSSHBG00005004325) #34	ACTA2 (ENSSHBG00005004323) #35	STAMBPL1 (ENSSHBG00005004317) #36	ENSSHBG00005004289	ANKRD22 (ENSSHBG00005004266) #37	ENSSHBG00005004228	ENSSHBG00005003732	TMEM72 (ENSSHBG00005003640)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Chicken	MODERN SPECIES	35	RBP4A (ENSGALG00010020357)	PDE6C (ENSGALG00010020320)	FRA10AC1 (ENSGALG00010020313)	LGI1 (ENSGALG00010020295)	SLC35G1 (ENSGALG00010020236)	PLCE1 (ENSGALG00010019982)	NOC3L (ENSGALG00010019916)	ENSGALG00010019905	DD1CR (ENSGALG00010022835)	TNKS2 (ENSGALG00010020578) #16	PPP1R3C (ENSGALG00010020572) #17	HECTD2 (ENSGALG00010020550) #18	PCGF5 (ENSGALG00010020540) #19	ANKRD1 (ENSGALG00010020507) #20	RPP30 (ENSGALG00010020481) #21	HTR7 (ENSGALG00010020438) #22	KIF20B (ENSGALG00010018177) #23	ENSGALG00010018162	SLC16A12 (ENSGALG00010018154) #25	IFIT5 (ENSGALG00010018016) #26	LIPA (ENSGALG00010018011) #32	CH25H (ENSGALG00010022134) #33	FAS (ENSGALG00010022081) #34	ACTA2 (ENSGALG00010022071) #35	STAMBPL1 (ENSGALG00010022022) #36	ENSGALG00010022012	ANKRD22 (ENSGALG00010021999) #37	ENSGALG00010021886	TMEM72 (ENSGALG00010021875)	CXCL12 (ENSGALG00010021867)	ERCC6 (ENSGALG00010021829)
Turkey	MODERN SPECIES	28	RBP4 (ENSMGAG00000008841)	PDE6C (ENSMGAG00000008810)	FRA10AC1 (ENSMGAG00000008830)	LGI1 (ENSMGAG00000008780)	SLC35G1 (ENSMGAG00000008778)	PLCE1 (ENSMGAG00000008715)	NOC3L (ENSMGAG00000008676)	ENSMGAG00000008661	ENSMGAG00000015332	TNKS2 (ENSMGAG00000008555) #16	PPP1R3C (ENSMGAG00000015331) #17	HECTD2 (ENSMGAG00000008530) #18	PCGF5 (ENSMGAG00000008508) #19	ANKRD1 (ENSMGAG00000008455) #20	RPP30 (ENSMGAG00000008452) #21	HTR7 (ENSMGAG00000008444) #22	ENSMGAG00000021389 #23	PANK1 (ENSMGAG00000008418) #24	SLC16A12 (ENSMGAG00000008389) #25	ENSMGAG00000015330 #26	LIPA (ENSMGAG00000008364) #32	CH25H (ENSMGAG00000015329) #33	FAS (ENSMGAG00000008349) #34	ACTA2 (ENSMGAG00000008313) #35	STAMBPL1 (ENSMGAG00000008290) #36	ENSMGAG00000008183	ANKRD22 (ENSMGAG00000008271) #37	ENSMGAG00000008254	ENSMGAG00000018063	ENSMGAG00000008167	ENSMGAG00000008155
Japanese quail	MODERN SPECIES	24	PDE6C (ENSCJPG00005019044)	FRA10AC1 (ENSCJPG00005019043)	LGI1 (ENSCJPG00005019042)	SLC35G1 (ENSCJPG00005019041)	PLCE1 (ENSCJPG00005019039)	NOC3L (ENSCJPG00005019037)	TBC1D12 (ENSCJPG00005018990)	ENSCJPG00005018982	PPP1R3C (ENSCJPG00005018981) #17	TNKS2 (ENSCJPG00005018977) #16	HECTD2 (ENSCJPG00005018973) #18	ENSCJPG00005018965	PCGF5 (ENSCJPG00005018963) #19	ANKRD1 (ENSCJPG00005018927) #20	RPP30 (ENSCJPG00005018926) #21	HTR7 (ENSCJPG00005018925) #22	ENSCJPG00005018924	ENSCJPG00005018923	ENSCJPG00005018920 #23	ENSCJPG00005018918	PANK1 (ENSCJPG00005018916) #24	SLC16A12 (ENSCJPG00005018915) #25	ENSCJPG00005018914 #26	LIPA (ENSCJPG00005018913) #32	CH25H (ENSCJPG00005018912) #33	FAS (ENSCJPG00005018907) #34	ENSCJPG00005018906	ACTA2 (ENSCJPG00005018905) #35	STAMBPL1 (ENSCJPG00005018904) #36	ANKRD22 (ENSCJPG00005018903) #37	ENSCJPG00005018902
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Duck	MODERN SPECIES	24	LGI1 (ENSAPLG00000013787)	SLC35G1 (ENSAPLG00000013753)	PLCE1 (ENSAPLG00000013314)	NOC3L (ENSAPLG00000012432)	TBC1D12 (ENSAPLG00000012124)	ENSAPLG00000012116	ENSAPLG00000019728	ENSAPLG00000018936	ENSAPLG00000020120 #15	TNKS2 (ENSAPLG00000011056) #16	PPP1R3C (ENSAPLG00000001908) #17	HECTD2 (ENSAPLG00000010621) #18	PCGF5 (ENSAPLG00000010307) #19	ANKRD1 (ENSAPLG00000010068) #20	RPP30 (ENSAPLG00000009959) #21	HTR7 (ENSAPLG00000021064) #22	PANK1 (ENSAPLG00000004016) #24	SLC16A12 (ENSAPLG00000003860) #25	LIPA (ENSAPLG00000018116) #32	CH25H (ENSAPLG00000002172) #33	ENSAPLG00000021208 #34	ACTA2 (ENSAPLG00000002915) #35	STAMBPL1 (ENSAPLG00000002723) #36	ENSAPLG00000017704	ANKRD22 (ENSAPLG00000001838) #37	ENSAPLG00000001900	ENSAPLG00000015611	TMEM72 (ENSAPLG00000030711)	CXCL12 (ENSAPLG00000015341)	ERCC6 (ENSAPLG00000016335)	ENSAPLG00000028230
Pink-footed goose	MODERN SPECIES	75	PDE6C (ENSABRG00000011575)	FRA10AC1 (ENSABRG00000011604)	LGI1 (ENSABRG00000011628)	SLC35G1 (ENSABRG00000011631)	PLCE1 (ENSABRG00000011639)	NOC3L (ENSABRG00000011670)	TBC1D12 (ENSABRG00000011695)	ENSABRG00000011723	ENSABRG00000011728	TNKS2 (ENSABRG00000011742) #16	PPP1R3C (ENSABRG00000011767) #17	HECTD2 (ENSABRG00000011771) #18	PCGF5 (ENSABRG00000011791) #19	ANKRD1 (ENSABRG00000011807) #20	RPP30 (ENSABRG00000011826) #21	HTR7 (ENSABRG00000011854) #22	KIF20B (ENSABRG00000011871) #23	PANK1 (ENSABRG00000011957) #24	SLC16A12 (ENSABRG00000011979) #25	ENSABRG00000011986 #26	LIPA (ENSABRG00000011992) #32	CH25H (ENSABRG00000012002) #33	ENSABRG00000012026 #34	ACTA2 (ENSABRG00000012041) #35	STAMBPL1 (ENSABRG00000012052) #36	ENSABRG00000012061	ANKRD22 (ENSABRG00000012077) #37	ENSABRG00000012089	TMEM72 (ENSABRG00000012143)	CXCL12 (ENSABRG00000012153)	ERCC6 (ENSABRG00000012181)
Anura	ANCESTRAL SPECIES	177	ENSGT00940000159406	ENSGT00940000166052	ENSGT00940000160543	ENSGT00940000164766	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25
Frog	MODERN SPECIES	7	slc22a15.2 (ENSXETG00000020972)	plce1 (ENSXETG00000030514)	ENSXETG00000049270	noc3l (ENSXETG00000020975)	tbc1d12 (ENSXETG00000030404)	drd1c (ENSXETG00000020979)	fgfbp3 (ENSXETG00000039895) #15	tnks2 (ENSXETG00000020983) #16	ppp1r3c (ENSXETG00000037792) #17	hectd2 (ENSXETG00000031534) #18	pcgf5 (ENSXETG00000032043) #19	ankrd1 (ENSXETG00000021783) #20	ENSXETG00000033322	rpp30 (ENSXETG00000021785) #21	itln2 (ENSXETG00000038421)	htr7 (ENSXETG00000031961) #22	ENSXETG00000034877	kif20b (ENSXETG00000026373) #23	pank1 (ENSXETG00000032625) #24	slc16a12 (ENSXETG00000021814) #25	ENSXETG00000046204	ifit1b (ENSXETG00000048583) #26	ifit5 (ENSXETG00000047612) #26	ENSXETG00000042641 #26	XB959836 [provisional:ifit5] (ENSXETG00000037825) #26	ENSXETG00000045477 #26	ENSXETG00000044793 #26	ENSXETG00000042889 #26	slc35g1 (ENSXETG00000003728)	lgi1 (ENSXETG00000003729)	fra10ac1 (ENSXETG00000026367)
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000013877	TNKS2 (ENSLLEG00000013173) #16	ENSLLEG00000013136	KLHL10 (ENSLLEG00000013069)	ENSLLEG00000013052	ENSLLEG00000012991	ENSLLEG00000012935	PPP1R3C (ENSLLEG00000012902) #17	ENSLLEG00000012891	ENSLLEG00000012874	HECTD2 (ENSLLEG00000012753) #18	PCGF5 (ENSLLEG00000012628) #19	ANKRD1 (ENSLLEG00000012373) #20	ENSLLEG00000012301	ENSLLEG00000012211 #21	HTR7 (ENSLLEG00000014264) #22	ENSLLEG00000014224	KIF20B (ENSLLEG00000013809) #23	ENSLLEG00000013752	PANK1 (ENSLLEG00000013698) #24	ENSLLEG00000013670	SLC16A12 (ENSLLEG00000013586) #25	ENSLLEG00000013564	ENSLLEG00000013374 #26	ENSLLEG00000013277 #26	ENSLLEG00000013236 #37	ENSLLEG00000013076 #32	ENSLLEG00000013047 #26	ENSLLEG00000013014 #26	ENSLLEG00000012977 #26	ENSLLEG00000012917 #26
Coelacanth	MODERN SPECIES	3362																HTR7 (ENSLACG00000000885) #22	ENSLACG00000003796 #23
Actinopterygii	ANCESTRAL SPECIES	7	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645	ENSGT00390000017833
Neopterygii	ANCESTRAL SPECIES	10	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645	ENSGT00390000017833
Spotted gar	MODERN SPECIES	275													slc16a12b (ENSLOCG00000000022) #25	pank1b (ENSLOCG00000000023) #24	zgc:65997 (ENSLOCG00000000024)	HTR7 (ENSLOCG00000000025) #22	KIF20B (ENSLOCG00000000026) #23	rpp30 (ENSLOCG00000000031) #21	ankrd1b (ENSLOCG00000000035) #20	pcgf5b (ENSLOCG00000000040) #19	HECTD2 (ENSLOCG00000000043) #18
Osteoglossocephalai	ANCESTRAL SPECIES	15							ENSGT00940000182525	ENSGT00940000155648.B.b #17	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	82	ENSGT00940000165723.a	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35
Otomorpha	ANCESTRAL SPECIES	454													ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h
Otophysi	ANCESTRAL SPECIES	96													ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165073.a.b.b.b.a.a
Characiphysae	ANCESTRAL SPECIES	54											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.b #23	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676
Channel catfish	MODERN SPECIES	28	ppp1r3ca (ENSIPUG00000017690) #17	ENSIPUG00000017696 #15	ENSIPUG00000017701	ENSIPUG00000017708	fam98a (ENSIPUG00000017737)	RASGRP3 (ENSIPUG00000017788)	LTBP1 (ENSIPUG00000017869)	ttc27 (ENSIPUG00000017965)	ENSIPUG00000017982	SGMS1 (ENSIPUG00000017991)	minpp1a (ENSIPUG00000018005)	ENSIPUG00000018017	fas (ENSIPUG00000018072) #34	SLC16A12 (ENSIPUG00000018118) #25	pank1a (ENSIPUG00000018133) #24	ENSIPUG00000018148 #22	ENSIPUG00000018156 #23	ENSIPUG00000018208	BIRC6 (ENSIPUG00000018224)	yipf4 (ENSIPUG00000018317)	exo1 (ENSIPUG00000018328)	ENSIPUG00000018358	ENSIPUG00000018388	ENSIPUG00000018391	mrps5 (ENSIPUG00000018395)	malb (ENSIPUG00000018407)	ENSIPUG00000018415	ENSIPUG00000018424	nphp1 (ENSIPUG00000018431)	MTLN (ENSIPUG00000018471)	slc8a1b (ENSIPUG00000018476)
Characiphysae_b	ANCESTRAL SPECIES	53											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000154902.nb.a
Characoidei	ANCESTRAL SPECIES	63											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000154902.nb.a
Mexicana tetra	MODERN SPECIES	24	ENSAMXG00000011080	MAP4K3 (ENSAMXG00000011068)	ENSAMXG00000011063	morn2 (ENSAMXG00000039447)	znf593 (ENSAMXG00000039647)	selenon (ENSAMXG00000011032)	ENSAMXG00000011027	minpp1a (ENSAMXG00000040249)	minpp1a (ENSAMXG00000011005)	papss2a (ENSAMXG00000010997)	ENSAMXG00000034893	ENSAMXG00000041395 #34	SLC16A12 (ENSAMXG00000010978) #25	pank1a (ENSAMXG00000010968) #24	zgc:65997 (ENSAMXG00000038112)	HTR7 (ENSAMXG00000040600) #22	ENSAMXG00000010935	ENSAMXG00000010932	exo1 (ENSAMXG00000010918)	yipf4 (ENSAMXG00000010903)	BIRC6 (ENSAMXG00000010869)	si:dkey-221l4.10 (ENSAMXG00000028340)	jade1 (ENSAMXG00000017786)	ENSAMXG00000030556	asmt2 (ENSAMXG00000017811)	pgrmc2 (ENSAMXG00000034920)	ENSAMXG00000006805	ENSAMXG00000033040	ENSAMXG00000012704	ENSAMXG00000029882	SANBR (ENSAMXG00000001065)
Red-bellied piranha	MODERN SPECIES	1229												ENSPNAG00000012713 #26	ENSPNAG00000012703 #26	slc16a12b (ENSPNAG00000002362) #25	pank1b (ENSPNAG00000012679) #24	ENSPNAG00000012639 #22
Electric eel	MODERN SPECIES	841											papss2a (ENSEEEG00000019858)	ENSEEEG00000019863	ENSEEEG00000019865	SLC16A12 (ENSEEEG00000019866) #25	pank1a (ENSEEEG00000019867) #24	HTR7 (ENSEEEG00000019869) #22	ENSEEEG00000019945
Cyprinoidei	ANCESTRAL SPECIES	76	ENSGT00390000008178	ENSGT00390000016883	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b.e	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165073.a.b.b.b.a.a.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	313	ENSGT00940000157597.e.b	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b.a #34	ENSGT00940000157373.l.g #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a #22	ENSGT00940000155989.e.d #23	ENSGT00940000153956.a.b.b #20	ENSGT00940000155896.k.h #19	ENSGT00940000155648.B.b.d #17	ENSGT00940000154372.b.c #15	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00940000167863.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w	ENSGT00940000153168.B.c.b	ENSGT00510000047676.c	ENSGT00940000165200.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	5	ran (ENSCARG00000014915)	stx3b (ENSCARG00000014972)	KDM2A (ENSCARG00000015168)	ANKRD13D (ENSCARG00000017308)	ctbp1 (ENSCARG00000017487)	spon2a (ENSCARG00000017726)	ENSCARG00000017747	ENSCARG00000017752	ENSCARG00000017755	ENSCARG00000017766	papss2a (ENSCARG00000017816)	ENSCARG00000018270	ENSCARG00000018290 #34	pank1a (ENSCARG00000018306) #24	zgc:65997 (ENSCARG00000018328)	ENSCARG00000018336 #22	ENSCARG00000018351 #23	ANKRD1 (ENSCARG00000018389) #20	pcgf5a (ENSCARG00000018427) #19	ppp1r3ca (ENSCARG00000018448) #17	ENSCARG00000018466 #15	ENSCARG00000018471	ENSCARG00000018526	ENSCARG00000019370	rasgrp3 (ENSCARG00000019403)	LTBP1 (ENSCARG00000020520)	ENSCARG00000020768	BIRC6 (ENSCARG00000020819)	yipf4 (ENSCARG00000021429)	exo1 (ENSCARG00000021447)	ENSCARG00000021525
Goldfish	MODERN SPECIES	2379							ENSCARG00000060847	ENSCARG00000060833	sgms1a (ENSCARG00000060822)	minpp1a (ENSCARG00000060801)	papss2a (ENSCARG00000060440)	ENSCARG00000060334	ENSCARG00000060322 #34	pank1a (ENSCARG00000060199) #24	zgc:65997 (ENSCARG00000069957)	ENSCARG00000069953 #22
Cyprininae_a	ANCESTRAL SPECIES	304	ENSGT00940000157597.e.a.a.a	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000154335.b.e.b	ENSGT00950000183126.b.b.a #34	ENSGT00940000157373.l.g #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a #22	ENSGT00940000155989.e.d #23	ENSGT00940000153956.a.b.b #20	ENSGT00940000155896.k.h #19	ENSGT00940000155648.B.b.d #17	ENSGT00940000154372.b.c #15	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00440000037341.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w	ENSGT00940000153168.B.c.b	ENSGT00510000047676.c	ENSGT00940000165200.a
Common carp reference	MODERN SPECIES	4	b3gnt2b (ENSCCRG00000082775)	ENSCCRG00000073128	ENSCCRG00000003107	ENSCCRG00000002941	pex13 (ENSCCRG00000003017)	ENSCCRG00000027247	slc18a2 (ENSCCRG00000027262)	ENSCCRG00000080142	sgms1a (ENSCCRG00000027300)	minpp1a (ENSCCRG00000027401)	papss2a (ENSCCRG00000027413)	ptena (ENSCCRG00000077527)	ENSCCRG00000055135 #34	pank1a (ENSCCRG00000027871) #24	zgc:65997 (ENSCCRG00000070786)	ENSCCRG00000082306 #22	ENSCCRG00000077844 #23	ENSCCRG00000024565 #20	pcgf5a (ENSCCRG00000024551) #19	ppp1r3ca (ENSCCRG00000026811) #17	ENSCCRG00000076912 #15	ENSCCRG00000049382	ENSCCRG00000017745	FAM98A (ENSCCRG00000032614)	rasgrp3 (ENSCCRG00000032622)	LTBP1 (ENSCCRG00000026896)	ttc27 (ENSCCRG00000075792)	BIRC6 (ENSCCRG00000027051)	yipf4 (ENSCCRG00000028446)	exo1 (ENSCCRG00000028456)	ENSCCRG00000067820
Golden-line barbel	MODERN SPECIES	17	EHBP1 (ENSSGRG00000006607)	b3gnt2b (ENSSGRG00000006584)	XPO1 (ENSSGRG00000004767)	SANBR (ENSSGRG00000004691)	PDZD8 (ENSSGRG00000004690)	slc18a2 (ENSSGRG00000004688)	ENSSGRG00000004682	sgms1a (ENSSGRG00000004680)	minpp1a (ENSSGRG00000004678)	papss2a (ENSSGRG00000001415)	ptena (ENSSGRG00000001060)	ENSSGRG00000001058 #34	pank1a (ENSSGRG00000001051) #24	zgc:65997 (ENSSGRG00000001038)	zgc:65997 (ENSSGRG00000001035)	ENSSGRG00000001033 #22	ANKRD1 (ENSSGRG00000001024) #20	pcgf5a (ENSSGRG00000001021) #19	ppp1r3ca (ENSSGRG00000001019) #17	ENSSGRG00000001017 #15	ENSSGRG00000001014	ENSSGRG00000000743	ENSSGRG00000000727	rasgrp3 (ENSSGRG00000000721)	LTBP1 (ENSSGRG00000000690)	ENSSGRG00000000689	ttc27 (ENSSGRG00000000500)	BIRC6 (ENSSGRG00000000393)	exo1 (ENSSGRG00000000327)	ENSSGRG00000000308	slc8a1b (ENSSGRG00000000277)
Cyprininae	ANCESTRAL SPECIES	40	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b #34	ENSGT00950000182946.lb.b.f.b #26	ENSGT00950000182946.lb.b.f.a #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l.h #24	ENSGT01010000222287.B.a.a.a.a.a.a.b #22	ENSGT00940000155989.e.c #23	ENSGT00940000153956.a.b.a #20	ENSGT00940000155896.k.g #19	ENSGT00940000155648.B.b.c #17	ENSGT00940000154372.b.d #15	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00440000037341.a	ENSGT00940000158843.j	ENSGT00940000155823.B.c	ENSGT00500000044929.b	ENSGT00940000156126.x	ENSGT00940000153168.B.c.a	ENSGT00510000047676.d	ENSGT00940000165200.b.a.a
Goldfish	MODERN SPECIES	8	ENSCARG00000024218	mtfr1l (ENSCARG00000024225)	STAC (ENSCARG00000024237)	pacrg (ENSCARG00000024273)	qkia (ENSCARG00000024292)	PTAFR (ENSCARG00000024362)	ENSCARG00000024370	papss2a (ENSCARG00000024486)	ptena (ENSCARG00000027288)	ENSCARG00000027478 #34	ENSCARG00000027517 #26	ENSCARG00000027527 #26	ENSCARG00000027531 #26	SLC16A12 (ENSCARG00000027535) #25	pank1a (ENSCARG00000027548) #24	ENSCARG00000027686 #22	ENSCARG00000027713 #23	ctsl.1 (ENSCARG00000027765)	vgll2b (ENSCARG00000027830)	nipal3 (ENSCARG00000027840)	rcan3 (ENSCARG00000027903)	jade1 (ENSCARG00000027942)	HIOMT (ENSCARG00000027952)	pgrmc2 (ENSCARG00000027959)	ENSCARG00000027972	calm1a (ENSCARG00000028100)	ttc7b (ENSCARG00000028166)	mrpl57 (ENSCARG00000029017)	fam149b1 (ENSCARG00000029033)	ENSCARG00000029064	ENSCARG00000029077
Cyprininae_a	ANCESTRAL SPECIES	35	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b #34	ENSGT00950000182946.lb.b.f.b #26	ENSGT00950000182946.lb.b.f.a #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l.h #24	ENSGT01010000222287.B.a.a.a.a.a.a.b #22	ENSGT00940000155989.e.c #23	ENSGT00940000153956.a.b.a #20	ENSGT00940000155896.k.g #19	ENSGT00940000155648.B.b.c #17	ENSGT00940000154372.b.d #15	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00940000167863.b	ENSGT00940000158843.j	ENSGT00940000155823.B.c	ENSGT00500000044929.b	ENSGT00940000156126.x	ENSGT00940000153168.B.c.a	ENSGT00510000047676.d	ENSGT00940000165200.b.a.a
Common carp reference	MODERN SPECIES	30	ENSCCRG00000003438	ENSCCRG00000003451	ENSCCRG00000055884	ENSCCRG00000057670	PDZD8 (ENSCCRG00000013188)	slc18a2 (ENSCCRG00000013071)	kcnk18 (ENSCCRG00000013054)	sgms1a (ENSCCRG00000070887)	papss2a (ENSCCRG00000055982)	ptena (ENSCCRG00000040992)	ENSCCRG00000040984 #34	ENSCCRG00000040975 #26	SLC16A12 (ENSCCRG00000052901) #25	ENSCCRG00000040972 #26	pank1a (ENSCCRG00000072473) #24	ENSCCRG00000055882 #22	ENSCCRG00000054383 #23	ENSCCRG00000024493 #20	pcgf5a (ENSCCRG00000063244) #19	ppp1r3ca (ENSCCRG00000070930) #17	ENSCCRG00000055943 #15	ENSCCRG00000073651	FAM98A (ENSCCRG00000055260)	rasgrp3 (ENSCCRG00000026875)	LTBP1 (ENSCCRG00000075901)	ttc27 (ENSCCRG00000081226)	ENSCCRG00000058107	BIRC6 (ENSCCRG00000028417)	yipf4 (ENSCCRG00000028403)	exo1 (ENSCCRG00000028405)	ENSCCRG00000070343
Golden-line barbel	MODERN SPECIES	53	ENSSGRG00000009075	XPO1 (ENSSGRG00000008167)	SANBR (ENSSGRG00000008070)	pex13 (ENSSGRG00000008068)	PDZD8 (ENSSGRG00000008067)	slc18a2 (ENSSGRG00000008065)	kcnk18 (ENSSGRG00000008063)	sgms1a (ENSSGRG00000008062)	minpp1a (ENSSGRG00000008060)	papss2a (ENSSGRG00000004155)	ptena (ENSSGRG00000003648)	ENSSGRG00000003634 #34	SLC16A12 (ENSSGRG00000003605) #25	pank1a (ENSSGRG00000003496) #24	ENSSGRG00000003482	ENSSGRG00000003479 #22	ENSSGRG00000003475 #23	ENSSGRG00000003460 #20	pcgf5a (ENSSGRG00000003454) #19	ppp1r3ca (ENSSGRG00000003451) #17	ENSSGRG00000003449	ENSSGRG00000002271	ENSSGRG00000002191	rasgrp3 (ENSSGRG00000002176)	LTBP1 (ENSSGRG00000001085)	ttc27 (ENSSGRG00000000693)	BIRC6 (ENSSGRG00000000451)	exo1 (ENSSGRG00000000336)	ENSSGRG00000000310	ENSSGRG00000000303	slc8a1b (ENSSGRG00000000276)
Zebrafish	MODERN SPECIES	8	pex13 (ENSDARG00000071037)	PDZD8 (ENSDARG00000088699)	slc18a2 (ENSDARG00000015110)	kcnk18 (ENSDARG00000057049)	sgms1a (ENSDARG00000057053)	minpp1a (ENSDARG00000057058)	papss2a (ENSDARG00000071021)	ptena (ENSDARG00000071018)	ENSDARG00000043586	ifit14 (ENSDARG00000071012) #26	ifit15 (ENSDARG00000043584) #26	ENSDARG00000056976 #26	SLC16A12 (ENSDARG00000017773) #25	pank1a (ENSDARG00000008192) #24	zgc:65997 (ENSDARG00000043562)	ENSDARG00000056949 #22	ENSDARG00000071009 #23	ANKRD1 (ENSDARG00000075263) #20	pcgf5a (ENSDARG00000071007) #19	ENSDARG00000088493	ppp1r3ca (ENSDARG00000071005) #17	ENSDARG00000040162 #15	ENSDARG00000115129	ENSDARG00000112088	FAM98A (ENSDARG00000078391)	rasgrp3 (ENSDARG00000077864)	LTBP1 (ENSDARG00000056922)	ttc27 (ENSDARG00000007918)	BIRC6 (ENSDARG00000074166)	yipf4 (ENSDARG00000030957)	exo1 (ENSDARG00000056832)
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	212										ENSGT00390000018436.a.b	ENSGT00950000183181.A.a	ENSGT00950000182850.a.a.b	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.c #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00390000008171	ENSGT00940000155793.a.b	ENSGT00530000063629.a	ENSGT00940000161321	ENSGT00940000154922.b.u.b.c	ENSGT00940000154922.b.u.a	ENSGT00940000165311.b
Atlantic herring	MODERN SPECIES	4	prkg1a (ENSCHAG00000002051)	nkx1.2la (ENSCHAG00000002007)	FAM53B (ENSCHAG00000001877)	eef1akmt2 (ENSCHAG00000001839)	abraxas2 (ENSCHAG00000001797)	zranb1b (ENSCHAG00000001261)	SMOC2 (ENSCHAG00000001012)	dact2 (ENSCHAG00000000937)	ablim1a (ENSCHAG00000000667)	ENSCHAG00000000507 #26	ENSCHAG00000000480 #26	ENSCHAG00000000450 #26	SLC16A12 (ENSCHAG00000000405) #25	pank1a (ENSCHAG00000017060) #24	zgc:65997 (ENSCHAG00000017038)	HTR7 (ENSCHAG00000017032) #22	ENSCHAG00000017019 #23	ANKRD1 (ENSCHAG00000016988) #20	pcgf5a (ENSCHAG00000016961) #19	HECTD2 (ENSCHAG00000016731) #18	ppp1r3ca (ENSCHAG00000016724) #17	ENSCHAG00000016714 #15	naa38 (ENSCHAG00000016677)	ENSCHAG00000016653	ENSCHAG00000016635	ENSCHAG00000015085	PLCE1 (ENSCHAG00000013684)	mrpl57 (ENSCHAG00000013647)	kcnh1a (ENSCHAG00000013567)	hhat (ENSCHAG00000013559)	CRIP3 (ENSCHAG00000013453)
Clupeiformes	ANCESTRAL SPECIES	136	ENSGT00940000158678	ENSGT00390000015792	ENSGT00390000018409.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.a.d #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808
Denticle herring	MODERN SPECIES	11	ptenb (ENSDCDG00000032985)	rnls (ENSDCDG00000032991)	rnls (ENSDCDG00000032993)	lipf (ENSDCDG00000032994) #32	ankrd22 (ENSDCDG00000032999) #37	STAMBPL1 (ENSDCDG00000033002) #36	ACTA2 (ENSDCDG00000033019) #35	ch25h (ENSDCDG00000033128) #33	ifit9 (ENSDCDG00000033129) #26	ifit9 (ENSDCDG00000033131) #26	ifit9 (ENSDCDG00000033132) #26	ifit9 (ENSDCDG00000033137) #26	ifit9 (ENSDCDG00000033154) #26	slc16a12b (ENSDCDG00000033168) #25	pank1b (ENSDCDG00000033170) #24	ENSDCDG00000033172 #22	ENSDCDG00000033176 #23	rpp30 (ENSDCDG00000033179) #21	ankrd1b (ENSDCDG00000033182) #20	HECTD2 (ENSDCDG00000033191) #18	ENSDCDG00000033274	ppp1r3cb (ENSDCDG00000033276) #17	MPP3 (ENSDCDG00000033280)	or63b2 (ENSDCDG00000033290)	rsph3 (ENSDCDG00000033291)	tut1 (ENSDCDG00000033292)	ENSDCDG00000033293	ENSDCDG00000033294	GRID1 (ENSDCDG00000033306)	ENSDCDG00000033329	WAPL (ENSDCDG00000000390)
Atlantic herring	MODERN SPECIES	15	atp6v0a1b (ENSCHAG00000013901)	NAGLU (ENSCHAG00000014384)	coasy (ENSCHAG00000014399)	ENSCHAG00000014453	rgrb (ENSCHAG00000014553)	lrit1b (ENSCHAG00000014568)	LRIT2 (ENSCHAG00000014594)	CDHR1 (ENSCHAG00000014606)	GHITM (ENSCHAG00000015374)	ifit9 (ENSCHAG00000015438) #26	ifit9 (ENSCHAG00000015447) #26	ENSCHAG00000015470 #26	ENSCHAG00000015478 #26	slc16a12b (ENSCHAG00000015558) #25	pank1b (ENSCHAG00000015570) #24	ENSCHAG00000015633 #22	ENSCHAG00000015733 #23	rpp30 (ENSCHAG00000015752) #21	ankrd1b (ENSCHAG00000015777) #20	pcgf5b (ENSCHAG00000015788) #19	HECTD2 (ENSCHAG00000015819) #18	ppp1r3cb (ENSCHAG00000015935) #17	MPP3 (ENSCHAG00000015952)	ENSCHAG00000016608	ENSCHAG00000017832	ENSCHAG00000017849	znf281b (ENSCHAG00000017862)	ENSCHAG00000017886	ENSCHAG00000017912	nmt1b (ENSCHAG00000018417)	PLCD3 (ENSCHAG00000018524)
Euteleosteomorpha	ANCESTRAL SPECIES	88	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833	ENSGT00940000157825.a	ENSGT00510000047107.A
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00940000156467	ENSGT00940000154556.a.b	ENSGT00940000156841.a.a	ENSGT00940000156327.l.o	ENSGT00940000157509.a.f	ENSGT00390000009597.c	ENSGT00390000015405	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab	ENSGT00390000004284.e	ENSGT00940000154445.a	ENSGT00390000007551	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00390000018525.a.a	ENSGT00390000002164.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00390000009877	ENSGT00390000008798.d.b	ENSGT00940000157851	ENSGT00940000157528	ENSGT00950000183079.B.j	ENSGT00730000111092	ENSGT00940000168294	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g	ENSGT00940000156695
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	763											ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a	ENSGT00390000002164.a.d	ENSGT00940000157912
Huchen	MODERN SPECIES	2570													cnrip1b (ENSHHUG00000052637)	cisd1 (ENSHHUG00000052636)	pank1a (ENSHHUG00000052625) #24	ENSHHUG00000052623 #22	ENSHHUG00000052618 #23	ENSHHUG00000052614 #23	sft2d1 (ENSHHUG00000052607)
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00390000002210.c.a	ENSGT00940000162838.g.b.c	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00940000157912.e.b	ENSGT00940000168294.b	ENSGT00940000156695.i	ENSGT00940000165188.d	ENSGT00390000010094.b.f	ENSGT00940000157084.e.b.c	ENSGT00940000158672.c.d	ENSGT00940000154784.D.a.a.b.a.b.d	ENSGT00950000183000.d.e	ENSGT00940000154805.b.g.e.a.u.b	ENSGT00390000008264.d.d	ENSGT00940000156008.h	ENSGT00510000048896
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000159704.j	ENSGT01080000257956	ENSGT01080000257692	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00940000157912.e.b	ENSGT00940000156543.d	ENSGT00390000008798.d.b.f.b	ENSGT00940000157528.h	ENSGT00950000183079.B.j.a.a.b	ENSGT00940000168294.b	ENSGT00940000156695.i
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000078194	ENSSSAG00000078551	slc18a3b (ENSSSAG00000099206)	rgrb (ENSSSAG00000078574)	lrit1b (ENSSSAG00000055242)	ENSSSAG00000078579	CDHR1 (ENSSSAG00000078583)	ENSSSAG00000040663	ENSSSAG00000040697	ENSSSAG00000105133	ENSSSAG00000100224	ENSSSAG00000053545	ENSSSAG00000119980	ENSSSAG00000078607	pank1a (ENSSSAG00000120413) #24	ENSSSAG00000117112 #22	ENSSSAG00000054281 #23	sft2a (ENSSSAG00000078682)	ENSSSAG00000108028	pde10a (ENSSSAG00000078742)	ENSSSAG00000111190	ENSSSAG00000089712	ENSSSAG00000096165	mcu (ENSSSAG00000011497)	micu1 (ENSSSAG00000115584)	ENSSSAG00000078881	ENSSSAG00000109005	SAP (ENSSSAG00000078843)	ENSSSAG00000084913	unc5b (ENSSSAG00000089554)	ENSSSAG00000115881
River trout	MODERN SPECIES	1	ENSSTUG00000048848	ENSSTUG00000048854	CHAT (ENSSTUG00000048884)	slc18a3b (ENSSTUG00000049127)	rgrb (ENSSTUG00000049130)	lrit1b (ENSSTUG00000049133)	LRIT2 (ENSSTUG00000049136)	CDHR1 (ENSSTUG00000049152)	c1d (ENSSTUG00000049247)	ENSSTUG00000049256	ENSSTUG00000049270	ENSSTUG00000049272	cisd1 (ENSSTUG00000049276)	MTLN (ENSSTUG00000049282)	pank1a (ENSSTUG00000049284) #24	ENSSTUG00000049293 #22	ENSSTUG00000049296 #23	sft2d1 (ENSSTUG00000049313)	PRR18 (ENSSTUG00000049323)	ENSSTUG00000049326	TBXT (ENSSTUG00000049327)	pde10a (ENSSTUG00000049366)	ENSSTUG00000049631	ENSSTUG00000049637	ENSSTUG00000049639	mcu (ENSSTUG00000049643)	nolc1 (ENSSTUG00000049652)	psap (ENSSTUG00000049665)	ENSSTUG00000049686	ENSSTUG00000049687	ENSSTUG00000049689
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000154632.sb	ENSGT00390000003349.w	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00390000002164.a.d	ENSGT00940000157912.e.a	ENSGT00940000168294.a.b	ENSGT00940000156695.i	ENSGT00940000156543.d	ENSGT00390000008798.d.b.f.a.a	ENSGT00940000157528.h
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000154632.sb	ENSGT00390000003349.w	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00390000002164.a.d	ENSGT00940000157912.e.a	ENSGT00940000168294.a.b	ENSGT00940000156695.i
Chinook salmon	MODERN SPECIES	17	mgme1 (ENSOTSG00005041489)	ENSOTSG00005041490	EPHX1 (ENSOTSG00005028491)	ENSOTSG00005028504	slc18a3b (ENSOTSG00005028505)	rgrb (ENSOTSG00005028506)	lrit1b (ENSOTSG00005028507)	LRIT2 (ENSOTSG00005028508)	CDHR1 (ENSOTSG00005028509)	ENSOTSG00005028514	ENSOTSG00005028516	cnrip1b (ENSOTSG00005028518)	cisd1 (ENSOTSG00005028521)	MTLN (ENSOTSG00005028527)	pank1a (ENSOTSG00005028528) #24	ENSOTSG00005028529 #22	ENSOTSG00005028530 #23	sft2d1 (ENSOTSG00005028532)	ENSOTSG00005028533	TBXT (ENSOTSG00005028534)	pla2g12b (ENSOTSG00005028537)	ENSOTSG00005028540	ENSOTSG00005028548	ENSOTSG00005028550	capn2a (ENSOTSG00005028552)	ENSOTSG00005028553	MYH6 (ENSOTSG00005028635)	ZCCHC24 (ENSOTSG00005046784)	ENSOTSG00005046785	ENSOTSG00005046787	LPL (ENSOTSG00005046788)
Coho salmon	MODERN SPECIES	17	FLRT3 (ENSOKIG00005038623)	ENSOKIG00005038627	ENSOKIG00005038643	ENSOKIG00005038665	CHAT (ENSOKIG00005038684)	slc18a3b (ENSOKIG00005038802)	rgrb (ENSOKIG00005038824)	lrit1b (ENSOKIG00005038840)	LRIT2 (ENSOKIG00005038850)	CDHR1 (ENSOKIG00005038866)	ENSOKIG00005038887	ENSOKIG00005038964	cisd1 (ENSOKIG00005038989)	MTLN (ENSOKIG00005039075)	pank1a (ENSOKIG00005039091) #24	ENSOKIG00005039226 #22	ENSOKIG00005039441 #23	sft2d1 (ENSOKIG00005039562)	ENSOKIG00005039608	TBXT (ENSOKIG00005039617)	ENSOKIG00005040095	ENSOKIG00005040104	nolc1 (ENSOKIG00005040129)	psap (ENSOKIG00005040198)	ENSOKIG00005040309	ENSOKIG00005040316	ENSOKIG00005040349	ENSOKIG00005040361	ENSOKIG00005040403	IRF2BP2 (ENSOKIG00005040460)	ENSOKIG00005040489
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000017965	ENSOMYG00000071357	ENSOMYG00000017993	ENSOMYG00000018100	slc18a3b (ENSOMYG00000018130)	rgrb (ENSOMYG00000018138)	lrit1b (ENSOMYG00000018189)	ENSOMYG00000018195	CDHR1 (ENSOMYG00000018207)	ENSOMYG00000058811	canb1 (ENSOMYG00000057779)	ENSOMYG00000077301	ENSOMYG00000018319	ENSOMYG00000018370	pank1a (ENSOMYG00000018381) #24	ENSOMYG00000018408 #22	ENSOMYG00000076271 #23	sft2d1 (ENSOMYG00000018425)	ENSOMYG00000062284	ENSOMYG00000018454	PRR18 (ENSOMYG00000018461)	ENSOMYG00000069128	TBXT (ENSOMYG00000018465)	ENSOMYG00000048227	pde10a (ENSOMYG00000018486)	ENSOMYG00000053242	mcu (ENSOMYG00000066459)	ENSOMYG00000070380	ENSOMYG00000057290	ENSOMYG00000070002	nolc1 (ENSOMYG00000018753)
Salmoninae	ANCESTRAL SPECIES	325	ENSGT00940000165096.b.b.e	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00950000185438
Huchen	MODERN SPECIES	1311			tob1b (ENSHHUG00000052334)	rgrb (ENSHHUG00000052335)	lrit1b (ENSHHUG00000052338)	LRIT2 (ENSHHUG00000052339)	ENSHHUG00000052340	c1d (ENSHHUG00000052344)	dnaaf10 (ENSHHUG00000052347)	pno1 (ENSHHUG00000052351)	ENSHHUG00000052353	cnrip1b (ENSHHUG00000052366)	cisd1 (ENSHHUG00000052367)	pank1a (ENSHHUG00000052369) #24	zgc:65997 (ENSHHUG00000052374)	ENSHHUG00000052376 #22	ENSHHUG00000052378 #23	ENSHHUG00000052387
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00950000183091.A.b	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT00950000183079.B.j.a.a.a	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00960000188766
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT01070000254121.a	ENSGT00950000183079.B.j.b	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT01070000254121.a	ENSGT00950000183079.B.j.b	ENSGT00940000168294.a.a	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00390000010398.A
Coho salmon	MODERN SPECIES	12	ENSOKIG00005043443	bsk146 (ENSOKIG00005043410)	ENSOKIG00005043401	ENSOKIG00005042455	TOB1 (ENSOKIG00005042337)	rgrb (ENSOKIG00005042295)	lrit1b (ENSOKIG00005042272)	LRIT2 (ENSOKIG00005042253)	CDHR1 (ENSOKIG00005041956)	c1d (ENSOKIG00005041926)	pno1 (ENSOKIG00005041885)	dnaaf10 (ENSOKIG00005041789)	CISD1 (ENSOKIG00005041739)	pank1a (ENSOKIG00005041703) #24	zgc:65997 (ENSOKIG00005041663)	ENSOKIG00005041651 #22	ENSOKIG00005041578 #23	SFT2D1 (ENSOKIG00005041539)	pde10a (ENSOKIG00005038689)	ENSOKIG00005038572	pla2g12b (ENSOKIG00005038363)	OIT3 (ENSOKIG00005038042)	mcu (ENSOKIG00005038018)	ENSOKIG00005038008	ENSOKIG00005037986	ENSOKIG00005037981	micu1 (ENSOKIG00005037908)	ENSOKIG00005037869	mrps6 (ENSOKIG00005037855)	SLC29A1 (ENSOKIG00005037838)	psap (ENSOKIG00005037692)
Chinook salmon	MODERN SPECIES	16	hs3st3l (ENSOTSG00005005009)	ENSOTSG00005005008	dhrs7cb (ENSOTSG00005005003)	ENSOTSG00005004991	ENSOTSG00005004986	bsk146 (ENSOTSG00005004984)	c1d (ENSOTSG00005004971)	dnaaf10 (ENSOTSG00005004969)	PNO1 (ENSOTSG00005004967)	ENSOTSG00005004965	CNRIP1 (ENSOTSG00005004964)	ENSOTSG00005004962	ENSOTSG00005004961	pank1a (ENSOTSG00005004960) #24	zgc:65997 (ENSOTSG00005004959)	ENSOTSG00005004957 #22	ly6pge (ENSOTSG00005004954)	ENSOTSG00005004951	psap (ENSOTSG00005004901)	SLC29A1 (ENSOTSG00005004734)	mrps6 (ENSOTSG00005004723)	ENSOTSG00005004721	ENSOTSG00005004717	rab10 (ENSOTSG00005004713)	ENSOTSG00005004711	ENSOTSG00005004710	ntpcr (ENSOTSG00005004707)	ENSOTSG00005004703	KLHDC3 (ENSOTSG00005004701)	ENSOTSG00005004685	ENSOTSG00005004683
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000012389	ENSOMYG00000055609	rgrb (ENSOMYG00000012374)	LRIT1 (ENSOMYG00000012359)	ENSOMYG00000012346	ENSOMYG00000060629	CDHR1 (ENSOMYG00000012281)	ENSOMYG00000012244	pno1 (ENSOMYG00000012229)	ENSOMYG00000012215	ENSOMYG00000055933	ENSOMYG00000061758	ENSOMYG00000053632	ENSOMYG00000012181	pank1a (ENSOMYG00000012168) #24	ENSOMYG00000012162 #22	ENSOMYG00000012149 #23	ENSOMYG00000062569 #23	sft2d1 (ENSOMYG00000051704)	PRR18 (ENSOMYG00000071091)	pde10a (ENSOMYG00000056489)	ENSOMYG00000050336	pla2g12b (ENSOMYG00000008035)	OIT3 (ENSOMYG00000008101)	ENSOMYG00000071164	mcu (ENSOMYG00000008119)	ENSOMYG00000067585	micu1 (ENSOMYG00000056486)	nolc1 (ENSOMYG00000008483)	mrps6 (ENSOMYG00000008501)	ENSOMYG00000008527
Salmo	ANCESTRAL SPECIES	3	ENSGT00940000165096.b.b.e	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00390000018052	ENSGT00950000183091.A.b	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT00950000183079.B.j.a.a.a	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00960000188766
River trout	MODERN SPECIES	11	ENSSTUG00000001439	TOB1 (ENSSTUG00000001327)	rgrb (ENSSTUG00000001319)	lrit1b (ENSSTUG00000001310)	LRIT2 (ENSSTUG00000001300)	CDHR1 (ENSSTUG00000001153)	c1d (ENSSTUG00000001125)	pno1 (ENSSTUG00000001113)	dnaaf10 (ENSSTUG00000001082)	cnrip1b (ENSSTUG00000001070)	ADK (ENSSTUG00000001067)	cisd1 (ENSSTUG00000001060)	ENSSTUG00000001057	pank1a (ENSSTUG00000001033) #24	zgc:65997 (ENSSTUG00000001022)	ENSSTUG00000001018 #22	ENSSTUG00000000931 #23	sft2d1 (ENSSTUG00000000902)	PRR18 (ENSSTUG00000000898)	pde10a (ENSSTUG00000000703)	ENSSTUG00000000681	ENSSTUG00000000673	pla2g12b (ENSSTUG00000000603)	OIT3 (ENSSTUG00000000571)	mcu (ENSSTUG00000000554)	micu1 (ENSSTUG00000000284)	nolc1 (ENSSTUG00000000244)	mrps6 (ENSSTUG00000000238)	SLC29A1 (ENSSTUG00000000175)	psap (ENSSTUG00000000150)	SLC29A3 (ENSSTUG00000000126)
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000055677	ENSSSAG00000092692	rgrb (ENSSSAG00000120288)	LRIT1 (ENSSSAG00000105330)	ENSSSAG00000092867	CDHR1 (ENSSSAG00000054429)	ENSSSAG00000054384	pno1 (ENSSSAG00000054375)	ENSSSAG00000054332	ENSSSAG00000121949	ENSSSAG00000089836	ENSSSAG00000102484	cisd1 (ENSSSAG00000054306)	pank1a (ENSSSAG00000054291) #24	zgc:65997 (ENSSSAG00000054288)	ENSSSAG00000085294 #22	ENSSSAG00000078645 #23	sft2d1 (ENSSSAG00000054276)	ENSSSAG00000040706	ENSSSAG00000086110	pde10a (ENSSSAG00000118189)	ENSSSAG00000087765	pla2g12b (ENSSSAG00000040768)	OIT3 (ENSSSAG00000054635)	ENSSSAG00000117417	mcu (ENSSSAG00000120992)	ENSSSAG00000088633	ENSSSAG00000082988	micu1 (ENSSSAG00000041313)	mrps6 (ENSSSAG00000100405)	nolc1 (ENSSSAG00000041502)
Northern pike	MODERN SPECIES	4	papolg (ENSELUG00000014497)	ACTR2 (ENSELUG00000014576)	SPRED2 (ENSELUG00000014634)	ENSELUG00000031773	ENSELUG00000014739	ENSELUG00000014766	ENSELUG00000014800	C1D (ENSELUG00000014823)	pno1 (ENSELUG00000014887)	dnaaf10 (ENSELUG00000015074)	cnrip1b (ENSELUG00000015120)	cisd1 (ENSELUG00000015140)	ENSELUG00000015188	pank1a (ENSELUG00000015238) #24	zgc:65997 (ENSELUG00000015263)	ENSELUG00000015297 #22	ENSELUG00000015384 #23	sft2d1 (ENSELUG00000015430)	PRR18 (ENSELUG00000015440)	TBXT (ENSELUG00000015495)	pde10a (ENSELUG00000015533)	ENSELUG00000015550	pla2g12b (ENSELUG00000015559)	OIT3 (ENSELUG00000015597)	mcu (ENSELUG00000015640)	micu1 (ENSELUG00000015709)	ENSELUG00000015745	ENSELUG00000030324	ENSELUG00000015865	ENSELUG00000015782	ENSELUG00000029047
Acanthomorphata	ANCESTRAL SPECIES	93	ENSGT00940000172797	ENSGT00940000153954	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000018613.a	ENSGT00950000183148.b.b	ENSGT00940000166409	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000004582	ENSGT01050000244965.a.b	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00650000094737	ENSGT00940000155061.a.b.k.a	ENSGT00940000164992	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a	ENSGT00940000170913
Euacanthomorphacea	ANCESTRAL SPECIES	57	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00390000007701	ENSGT00940000165449	ENSGT00940000157373.l #24	ENSGT00940000156169.a.b #25	ENSGT00940000161693	ENSGT00940000178131	ENSGT00390000016757	ENSGT00950000183154.a.b	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00730000111005	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b
Pinecone sodierfish	MODERN SPECIES	6	vip (ENSMMDG00005021881)	fbxo5 (ENSMMDG00005021884)	MTRF1L (ENSMMDG00005021887)	desi2 (ENSMMDG00005021891)	cox20 (ENSMMDG00005021894)	lhb (ENSMMDG00005021896)	ENSMMDG00005021898	ENSMMDG00005021900	lhb (ENSMMDG00005021902)	ENSMMDG00005021903	ENSMMDG00005021905	ENSMMDG00005021906	ENSMMDG00005021907	ENSMMDG00005021910	ARFGEF3 (ENSMMDG00005021925)	ENSMMDG00005021957 #22	ENSMMDG00005022010 #23	ENSMMDG00005022015	ENSMMDG00005022018	ENSMMDG00005022021	ENSMMDG00005022024	LYZ (ENSMMDG00005022036)	cdh11 (ENSMMDG00005022040)	chrna1 (ENSMMDG00005022045)	ENSMMDG00005022054	ENSMMDG00005022059	ENSMMDG00005022062	ENSMMDG00005022066	GPR155 (ENSMMDG00005022076)	tmem41ab (ENSMMDG00005022090)	cdh5 (ENSMMDG00005001225)
Percomorphaceae	ANCESTRAL SPECIES	45										ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b	ENSGT00980000202755	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000156754.a.b.b	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pomacentridae	ANCESTRAL SPECIES	107	ENSGT00940000168097.a.f	ENSGT00510000046499.e.b.a.b	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000154484.B.b	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Bicolor damselfish	MODERN SPECIES	1278								ENSSPAG00000012712	SLC22A7 (ENSSPAG00000013040)	ENSSPAG00000013054	ENSSPAG00000013071	cox20 (ENSSPAG00000013137)	lhb (ENSSPAG00000013179)	ENSSPAG00000013569	ARFGEF3 (ENSSPAG00000013650)	HTR7 (ENSSPAG00000013746) #22	ENSSPAG00000013763
Pomacentridae_A	ANCESTRAL SPECIES	70	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a.b	ENSGT00940000154922.b.u.a.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000154484.B.b	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10
Amphiprion	ANCESTRAL SPECIES	285									ENSGT00940000154922.b.u.a.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22
Clown anemonefish	MODERN SPECIES	2448											ENSAOCG00000023175	cox20 (ENSAOCG00000023163)	lhb (ENSAOCG00000001923)	ENSAOCG00000023127	ARFGEF3 (ENSAOCG00000023055)	HTR7 (ENSAOCG00000001660) #22
Cichlidae	ANCESTRAL SPECIES	38	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b	ENSGT00940000164766	ENSGT00610000086518.a.hb.a	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
Pseudocrenilabrinae	ANCESTRAL SPECIES	32	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.b.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.a	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000166295.b.b.b.a.b	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00940000168097.a.d	ENSGT00510000046499.f.b	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT00940000166295.b.b.b.a.b	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b	ENSGT00510000046499.f.a.b.a	ENSGT00940000168097.a.c	ENSGT00940000156754.a.a	ENSGT00610000086460
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.a	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT01090000260783	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a.f.b	ENSGT00940000166295.b.b.b.a.a	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b	ENSGT00510000046499.f.a.b.a
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT01090000260783.a	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a.f.b	ENSGT00940000166295.a	ENSGT00940000166295.b.b.b.a.a	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b
Eastern happy	MODERN SPECIES	4	ENSACLG00000001660	ENSACLG00000001640	ENSACLG00000001616	ENSACLG00000001607	cyp26c1 (ENSACLG00000001593) #7	ENSACLG00000001588	ENSACLG00000001575	ENSACLG00000001573	ENSACLG00000001542 #15	ppp1r3ca (ENSACLG00000001535) #17	HECTD2 (ENSACLG00000001444) #18	ENSACLG00000001434	pcgf5a (ENSACLG00000001426) #19	ANKRD1 (ENSACLG00000001411) #20	ARFGEF3 (ENSACLG00000001303)	HTR7 (ENSACLG00000001146) #22	ENSACLG00000001051 #23	ENSACLG00000001021	ENSACLG00000000976	ENSACLG00000000972	ENSACLG00000000958	ENSACLG00000000943	ENSACLG00000000936	ENSACLG00000000912	ENSACLG00000000887	ENSACLG00000000880	ENSACLG00000000874	ENSACLG00000000849	pdxkb (ENSACLG00000000813)	ENSACLG00000000793	ENSACLG00000000625
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005004923	yipf4 (ENSMZEG00005004927)	exo1 (ENSMZEG00005004947)	ENSMZEG00005005007	ENSMZEG00005005117	PDZD8 (ENSMZEG00005005129)	slc18a2 (ENSMZEG00005005147)	kcnk18 (ENSMZEG00005005191)	ENSMZEG00005005227	vax1 (ENSMZEG00005005238)	atp6v1ba (ENSMZEG00005005256)	ENSMZEG00005005291	shtn1 (ENSMZEG00005005310)	eno4 (ENSMZEG00005005363)	ARFGEF3 (ENSMZEG00005005973)	HTR7 (ENSMZEG00005027241) #22	ENSMZEG00005027243 #23	ENSMZEG00005027245	ENSMZEG00005027247	ENSMZEG00005027248	ENSMZEG00005027250	ENSMZEG00005027251	ENSMZEG00005027252	ENSMZEG00005027253	ENSMZEG00005027255	ENSMZEG00005027256	ENSMZEG00005027257	pdxkb (ENSMZEG00005027258)	ENSMZEG00005027259	ENSMZEG00005027260	ITSN1 (ENSMZEG00005027261)
P. nyererei	MODERN SPECIES	428	adob (ENSPNYG00000020377)	EGR2 (ENSPNYG00000020385)	ENSPNYG00000020394	ENSPNYG00000020410	ENSPNYG00000020420	ENSPNYG00000020427	cyp26c1 (ENSPNYG00000020455) #7	ENSPNYG00000000809	ENSPNYG00000000829	ENSPNYG00000000848 #15	ppp1r3ca (ENSPNYG00000000864) #17	HECTD2 (ENSPNYG00000000878) #18	pcgf5a (ENSPNYG00000001011) #19	ANKRD1 (ENSPNYG00000001062) #20	ARFGEF3 (ENSPNYG00000001081)	HTR7 (ENSPNYG00000001194) #22	ENSPNYG00000001243 #23
Burton s mouthbrooder	MODERN SPECIES	485	EGR2 (ENSHBUG00000004545)	kif11 (ENSHBUG00000004589) #10	ENSHBUG00000004611	slc22a15 (ENSHBUG00000004621)	ENSHBUG00000004636	ENSHBUG00000004675	cyp26c1 (ENSHBUG00000004702) #7	ENSHBUG00000004720	ENSHBUG00000004749	ENSHBUG00000004763 #15	ppp1r3ca (ENSHBUG00000004773) #17	HECTD2 (ENSHBUG00000004856) #18	pcgf5a (ENSHBUG00000004878) #19	ANKRD1 (ENSHBUG00000004891) #20	ARFGEF3 (ENSHBUG00000005073)	HTR7 (ENSHBUG00000005134) #22	ENSHBUG00000005161 #23	ENSHBUG00000005171
Lyretail cichlid	MODERN SPECIES	295	SLC30A6 (ENSNBRG00000007071)	adob (ENSNBRG00000007160)	EGR2 (ENSNBRG00000007168)	ENSNBRG00000007172	ENSNBRG00000007184	slc22a15 (ENSNBRG00000007193)	ENSNBRG00000007231	ENSNBRG00000007243	ENSNBRG00000007261	cyp26c1 (ENSNBRG00000007301) #7	ENSNBRG00000007423	ppp1r3ca (ENSNBRG00000007518) #17	HECTD2 (ENSNBRG00000007522) #18	ANKRD1 (ENSNBRG00000007567) #20	ARFGEF3 (ENSNBRG00000007615)	HTR7 (ENSNBRG00000007713) #22	ENSNBRG00000007739	ENSNBRG00000007757	ENSNBRG00000007777	ENSNBRG00000007789	ENSNBRG00000007799	ENSNBRG00000007818	pdxkb (ENSNBRG00000007837)	ITSN1 (ENSNBRG00000007888)	cryzl1 (ENSNBRG00000008039)	setd4 (ENSNBRG00000008080)	cbr1 (ENSNBRG00000008121)	ENSNBRG00000008162	ENSNBRG00000008193	ENSNBRG00000008210	gfra1a (ENSNBRG00000008221)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000037710	ENSONIG00000027577	cyp26c1 (ENSONIG00000015474) #7	ENSONIG00000038943	ENSONIG00000032275	ENSONIG00000021009	ENSONIG00000015476 #15	ENSONIG00000034219	ppp1r3c (ENSONIG00000015478) #17	HECTD2 (ENSONIG00000015479) #18	pcgf5a (ENSONIG00000015483) #19	ANKRD1 (ENSONIG00000015484) #20	ENSONIG00000031517	ENSONIG00000042548	ARFGEF3 (ENSONIG00000015488)	HTR7 (ENSONIG00000015494) #22	ENSONIG00000038786 #23	ENSONIG00000034052	ENSONIG00000028015	ENSONIG00000035641	ENSONIG00000030310	ENSONIG00000034645	rps27a (ENSONIG00000016075)	bmpr1aa (ENSONIG00000016072)	ldb3a (ENSONIG00000007106)	OPN4 (ENSONIG00000007115)	prorsd1 (ENSONIG00000007119)	ENSONIG00000037381
Midas cichlid	MODERN SPECIES	357	ENSACIG00000012020	slc22a15 (ENSACIG00000011991)	ENSACIG00000011981	ENSACIG00000011975	ENSACIG00000011961	ENSACIG00000011933	cyp26c1 (ENSACIG00000011918) #7	ENSACIG00000011907	ENSACIG00000011895 #15	ppp1r3ca (ENSACIG00000011877) #17	HECTD2 (ENSACIG00000011856) #18	pcgf5a (ENSACIG00000011765) #19	ANKRD1 (ENSACIG00000011747) #20	ENSACIG00000011733	ARFGEF3 (ENSACIG00000011632)	HTR7 (ENSACIG00000011619) #22	ENSACIG00000011609	ENSACIG00000011496 #23
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00940000160678.b
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155560.k.c	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00940000164014.a.b.b.a.a.a.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00390000007701	ENSGT00940000165449	ENSGT00940000157373.l #24
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000182031	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00940000164014.a.b.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.a.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00990000207825	ENSGT00390000007701	ENSGT00940000165449
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000012973	ENSOJAG00000012991	ENSOJAG00000013238	ENSOJAG00000015135	PRKCE (ENSOJAG00000015182)	epas1b (ENSOJAG00000015549)	ENSOJAG00000016506	lhb (ENSOJAG00000016529)	ENSOJAG00000016543	ENSOJAG00000016562	ENSOJAG00000016584	ENSOJAG00000016588	ENSOJAG00000016603	ENSOJAG00000016631	ARFGEF3 (ENSOJAG00000016652)	HTR7 (ENSOJAG00000017252) #22	ENSOJAG00000017262 #23	ANKRD1 (ENSOJAG00000017280) #20	pcgf5a (ENSOJAG00000017294) #19	HECTD2 (ENSOJAG00000017317) #18	ppp1r3ca (ENSOJAG00000017566) #17	ENSOJAG00000006017	FGFBP3 (ENSOJAG00000006062) #15	ENSOJAG00000006088	slc8a1b (ENSOJAG00000006243)	ENSOJAG00000007234	mrps5 (ENSOJAG00000007323)	malb (ENSOJAG00000007351)	ENSOJAG00000007360	zgc:65997 (ENSOJAG00000007479)	pank1a (ENSOJAG00000007501) #24
Indian medaka	MODERN SPECIES	27	tspan14 (ENSOMEG00000017924)	EML4 (ENSOMEG00000017876)	ENSOMEG00000017755	ENSOMEG00000017741	id4 (ENSOMEG00000017701)	cep76 (ENSOMEG00000017644)	ENSOMEG00000017540	ENSOMEG00000017459	ENSOMEG00000017366	PRKCE (ENSOMEG00000017287)	epas1b (ENSOMEG00000017236)	lhb (ENSOMEG00000017138)	ENSOMEG00000017118	ENSOMEG00000017100	ARFGEF3 (ENSOMEG00000016473)	HTR7 (ENSOMEG00000014316) #22	ENSOMEG00000014262 #23	ANKRD1 (ENSOMEG00000014118) #20	pcgf5a (ENSOMEG00000014083) #19	HECTD2 (ENSOMEG00000014030) #18	ppp1r3ca (ENSOMEG00000013931) #17	akap1b (ENSOMEG00000013912)	NLRX1 (ENSOMEG00000013878)	cuedc1b (ENSOMEG00000013817)	ENSOMEG00000013787	ENSOMEG00000013760	slc8a1b (ENSOMEG00000013705)	mrps5 (ENSOMEG00000013610)	malb (ENSOMEG00000000767)	ENSOMEG00000013521	ENSOMEG00000013512
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000157303.e	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a.a	ENSGT00940000154987.i.a.b	ENSGT00390000007701	ENSGT00940000165449
Chinese medaka	MODERN SPECIES	1079					ENSOSIG00000000853	GFRA1 (ENSOSIG00000000818)	ENSOSIG00000000789	ENSOSIG00000017615	ENSOSIG00000017556	epas1b (ENSOSIG00000017440)	ENSOSIG00000017417	lhb (ENSOSIG00000017414)	ENSOSIG00000017410	ENSOSIG00000017407	ARFGEF3 (ENSOSIG00000017315)	HTR7 (ENSOSIG00000017309) #22	ENSOSIG00000017308 #23	ANKRD1 (ENSOSIG00000017307) #20	pcgf5a (ENSOSIG00000017306) #19	HECTD2 (ENSOSIG00000017269) #18	ppp1r3ca (ENSOSIG00000017263) #17	ENSOSIG00000017262 #15	ENSOSIG00000017260	ENSOSIG00000017258	slc8a1b (ENSOSIG00000017234)	ENSOSIG00000017228	mrps5 (ENSOSIG00000017117)	malb (ENSOSIG00000017106)	ENSOSIG00000017102	ENSOSIG00000017101	pank1a (ENSOSIG00000017096) #24
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000023819	ENSORLG00000003469	ENSORLG00000003498	PRKCE (ENSORLG00000003528)	epas1b (ENSORLG00000003535)	ENSORLG00000029129	ENSORLG00000023742	ENSORLG00000003545	lhb (ENSORLG00000003553)	ENSORLG00000024300	ENSORLG00000028561	ENSORLG00000028163	ENSORLG00000029530	ENSORLG00000022300	ARFGEF3 (ENSORLG00000003579)	HTR7 (ENSORLG00000003592) #22	ENSORLG00000003677 #23	ANKRD1 (ENSORLG00000003705) #20	pcgf5a (ENSORLG00000003721) #19	HECTD2 (ENSORLG00000003746) #18	ppp1r3ca (ENSORLG00000025909) #17	ENSORLG00000027800 #15	ENSORLG00000018937	ENSORLG00000018929	slc8a1b (ENSORLG00000003757)	mrps5 (ENSORLG00000003768)	malb (ENSORLG00000022246)	ENSORLG00000003791	ENSORLG00000029066	nphp1 (ENSORLG00000003818)	zgc:65997 (ENSORLG00000003827)
Cyprinodontiformes	ANCESTRAL SPECIES	61											ENSGT00990000205827	ENSGT00940000164014.a.b.b.b	ENSGT00980000202755	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01030000234575.c.a.a.a.a.a.b.b.b.a	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Cyprinodontoidei	ANCESTRAL SPECIES	40										ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01030000234575.c.a.a.a.a.a.b.b.b.a	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Poeciliinae	ANCESTRAL SPECIES	36										ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb	ENSGT00940000164766	ENSGT00610000086518.a.bb.b	ENSGT00610000086518.a.bb.a	ENSGT00940000155921.h #10	ENSGT00940000158394.f
Poecilia	ANCESTRAL SPECIES	80								ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a.a.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.b.b	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.a	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb	ENSGT00940000164766	ENSGT00610000086518.a.bb.a.b	ENSGT00610000086518.a.bb.a.a	ENSGT00940000155921.h #10
NAME_6	ANCESTRAL SPECIES	180							ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a.a.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.b.b	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.a	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb.c	ENSGT00940000164766	ENSGT00610000086518.a.bb.a.b	ENSGT00610000086518.a.bb.a.a.a	ENSGT00940000155921.h #10
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2533															ARFGEF3 (ENSPLAG00000014599)	ENSPLAG00000014586 #22
Sailfin molly	MODERN SPECIES	2098																HTR7 (ENSPLAG00000005759) #22
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	466	ENSPFOG00000021839	ENSPFOG00000022650	ENSPFOG00000017058	ENSPFOG00000023928	ENSPFOG00000017060	ENSPFOG00000017061	ENSPFOG00000017062	ENSPFOG00000023892	ENSPFOG00000023777	ENSPFOG00000017066	ENSPFOG00000017067	ENSPFOG00000017070	ENSPFOG00000023576	ENSPFOG00000022429	ARFGEF3 (ENSPFOG00000017133)	ENSPFOG00000017356 #22	HTR7 (ENSPFOG00000017362) #22	ENSPFOG00000017376 #23	ANKRD1 (ENSPFOG00000017432) #20	pcgf5a (ENSPFOG00000023300) #19	HECTD2 (ENSPFOG00000017442) #18	ppp1r3ca (ENSPFOG00000017549) #17	ENSPFOG00000020790	FGFBP3 (ENSPFOG00000017551) #15	ENSPFOG00000017556	ENSPFOG00000022996	ENSPFOG00000024248	cyp26c1 (ENSPFOG00000017561) #7	ENSPFOG00000017590	ENSPFOG00000017622	ENSPFOG00000023615
Amazon molly	MODERN SPECIES	466	ENSPFOG00000022650	ENSPFOG00000017058	ENSPFOG00000023928	ENSPFOG00000017060	ENSPFOG00000017061	ENSPFOG00000017062	ENSPFOG00000023892	ENSPFOG00000023777	ENSPFOG00000017066	ENSPFOG00000017067	ENSPFOG00000017070	ENSPFOG00000023576	ENSPFOG00000022429	ARFGEF3 (ENSPFOG00000017133)	ENSPFOG00000017356 #22	HTR7 (ENSPFOG00000017362) #22	ENSPFOG00000017376 #23	ANKRD1 (ENSPFOG00000017432) #20	pcgf5a (ENSPFOG00000023300) #19	HECTD2 (ENSPFOG00000017442) #18	ppp1r3ca (ENSPFOG00000017549) #17	ENSPFOG00000020790	FGFBP3 (ENSPFOG00000017551) #15	ENSPFOG00000017556	ENSPFOG00000022996	ENSPFOG00000024248	cyp26c1 (ENSPFOG00000017561) #7	ENSPFOG00000017590	ENSPFOG00000017622	ENSPFOG00000023615	slc22a15 (ENSPFOG00000017646)
Guppy	MODERN SPECIES	445	SMOC2 (ENSPREG00000001325)	eif3s6ip (ENSPREG00000001257)	vsir (ENSPREG00000001244)	ENSPREG00000001143	PLPP4 (ENSPREG00000001099)	ENSPREG00000001079	ENSPREG00000001066	ENSPREG00000001045	ENSPREG00000001023	ENSPREG00000001017	ENSPREG00000000996	ENSPREG00000000991	ENSPREG00000000977	ENSPREG00000000934	ARFGEF3 (ENSPREG00000000905)	HTR7 (ENSPREG00000000878) #22	ENSPREG00000000830 #23	ANKRD1 (ENSPREG00000000817) #20	ENSPREG00000000795	pcgf5a (ENSPREG00000000743) #19	HECTD2 (ENSPREG00000000617) #18	ppp1r3ca (ENSPREG00000023195) #17	ENSPREG00000023194	FGFBP3 (ENSPREG00000023191) #15	ENSPREG00000023189	mrps6 (ENSPREG00000023188)	ENSPREG00000023185	micu1 (ENSPREG00000023180)	mcu (ENSPREG00000023178)	OIT3 (ENSPREG00000023173)	pla2g12b (ENSPREG00000023171)
Platyfish	MODERN SPECIES	14	PLPP4 (ENSXMAG00000004823)	ENSXMAG00000004826	ENSXMAG00000004951	ENSXMAG00000024205	ENSXMAG00000023138	ENSXMAG00000028232	ENSXMAG00000026100	ENSXMAG00000029940	ENSXMAG00000022677	ENSXMAG00000004947	ENSXMAG00000024538	ENSXMAG00000022272	ENSXMAG00000026696	ENSXMAG00000028863	ENSXMAG00000004837	HTR7 (ENSXMAG00000021872) #22	ENSXMAG00000004864 #23	ANKRD1 (ENSXMAG00000004868) #20	pcgf5a (ENSXMAG00000004878) #19	ENSXMAG00000027778	HECTD2 (ENSXMAG00000012825) #18	ppp1r3ca (ENSXMAG00000004886) #17	ENSXMAG00000025679	FGFBP3 (ENSXMAG00000004887) #15	ENSXMAG00000022141	cyp26c1 (ENSXMAG00000004889) #7	ENSXMAG00000015191	ENSXMAG00000019903	slc22a15 (ENSXMAG00000006658)	ENSXMAG00000028375	ENSXMAG00000023954
NAME_4	ANCESTRAL SPECIES	373															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17
Sheepshead minnow	MODERN SPECIES	177											ENSCVAG00000019282	ENSCVAG00000019311	ENSCVAG00000019346	ENSCVAG00000019351	ARFGEF3 (ENSCVAG00000019368)	HTR7 (ENSCVAG00000019388) #22	ENSCVAG00000019643 #23	ENSCVAG00000019653	pcgf5a (ENSCVAG00000019667) #19	HECTD2 (ENSCVAG00000019735) #18	ppp1r3ca (ENSCVAG00000019746) #17	ENSCVAG00000019764	ENSCVAG00000019767	ENSCVAG00000019788	ENSCVAG00000019837	ENSCVAG00000019966	arg1 (ENSCVAG00000020008)	p4ha1a (ENSCVAG00000020081)	RAB40B (ENSCVAG00000020127)	cox11 (ENSCVAG00000020133)	CBX2 (ENSCVAG00000020137)
Mummichog	MODERN SPECIES	704															ARFGEF3 (ENSFHEG00000012245)	HTR7 (ENSFHEG00000012218) #22
Aplocheiloidei	ANCESTRAL SPECIES	435															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22
Mangrove rivulus	MODERN SPECIES	202	abhd12 (ENSKMAG00000002706)	pygb (ENSKMAG00000002733)	ENSKMAG00000002810	ENSKMAG00000002814	ENSKMAG00000002834	elovl6l (ENSKMAG00000002845)	ENSKMAG00000002893	nfkb2 (ENSKMAG00000002951)	glud1a (ENSKMAG00000003020)	shld2 (ENSKMAG00000003068)	sncga (ENSKMAG00000003103)	ENSKMAG00000003119	ENSKMAG00000003133	rps27a (ENSKMAG00000003156)	ARFGEF3 (ENSKMAG00000003204)	HTR7 (ENSKMAG00000003418) #22
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000003256	ENSGT00940000160761	ENSGT00940000164045	ENSGT00390000001216	ENSGT00940000153766.A	ENSGT00390000008403	ENSGT00730000112471	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00390000011034	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.a.a	ENSGT00940000153566.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c
Tetraodon	MODERN SPECIES	9	mea1 (ENSTNIG00000013378)	LRRC73 (ENSTNIG00000013379)	DLK2 (ENSTNIG00000013380)	ENSTNIG00000013381	dnph1 (ENSTNIG00000013382)	yipf3 (ENSTNIG00000013383)	ncoa4 (ENSTNIG00000013384)	ENSTNIG00000013385	prph2b (ENSTNIG00000013386)	UBR2 (ENSTNIG00000013387)	prkn (ENSTNIG00000013388)	KCNG3 (ENSTNIG00000013389)	tspan14 (ENSTNIG00000013390)	EML4 (ENSTNIG00000013391)	ARFGEF3 (ENSTNIG00000013392)	HTR7 (ENSTNIG00000013393) #22	ENSTNIG00000013394 #23	ENSTNIG00000013395	ENSTNIG00000013396	ENSTNIG00000013397	ENSTNIG00000013398	ENSTNIG00000013399	ncapd3 (ENSTNIG00000013400)	RIN2 (ENSTNIG00000013401)	SLC24A3 (ENSTNIG00000013402)	CCDC85A (ENSTNIG00000013403)	vrk2 (ENSTNIG00000013404)	fancl (ENSTNIG00000013405)	ENSTNIG00000005029	ENSTNIG00000004033	RIMS1 (ENSTNIG00000009888)
Fugu	MODERN SPECIES	16	LRRC73 (ENSTRUG00000003016)	ENSTRUG00000003130	ENSTRUG00000003134	dnph1 (ENSTRUG00000003415)	yipf3 (ENSTRUG00000003502)	ncoa4 (ENSTRUG00000003924)	ENSTRUG00000024222	prph2b (ENSTRUG00000004626)	UBR2 (ENSTRUG00000004807)	prkn (ENSTRUG00000006244)	KCNG3 (ENSTRUG00000006356)	tspan14 (ENSTRUG00000006403)	EML4 (ENSTRUG00000006655)	ENSTRUG00000022034	ARFGEF3 (ENSTRUG00000007336)	HTR7 (ENSTRUG00000007675) #22	ENSTRUG00000007823 #23	ENSTRUG00000032084	ENSTRUG00000028338	ENSTRUG00000001097	ENSTRUG00000031896	ENSTRUG00000027834	ncapd3 (ENSTRUG00000001187)	SLC24A3 (ENSTRUG00000001777)	ENSTRUG00000020818	CCDC85A (ENSTRUG00000002280)	vrk2 (ENSTRUG00000002366)	fancl (ENSTRUG00000003132)	ENSTRUG00000026393	ENSTRUG00000003815	RIMS1 (ENSTRUG00000029275)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00980000202755	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ballan wrasse	MODERN SPECIES	18																HTR7 (ENSLBEG00000002622) #22	ENSLBEG00000002541 #23	ENSLBEG00000002468	ANKRD1 (ENSLBEG00000002428) #20	ENSLBEG00000002410	pcgf5a (ENSLBEG00000002360) #19	ANKRD1 (ENSLBEG00000002234) #20	HECTD2 (ENSLBEG00000002135) #18	ppp1r3ca (ENSLBEG00000002119) #17	ENSLBEG00000002061 #15	ENSLBEG00000001729	ENSLBEG00000001652	cyp26c1 (ENSLBEG00000001610) #7	TBC1D12 (ENSLBEG00000001565)	slc22a15 (ENSLBEG00000001502)	ENSLBEG00000001479
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.d	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.d	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pike perch	MODERN SPECIES	30	ENSSLUG00000009748	si:ch1073-126c3.2 (ENSSLUG00000009743)	GFRA1 (ENSSLUG00000009725)	ENSSLUG00000009287	PRKCE (ENSSLUG00000008607)	epas1b (ENSSLUG00000008511)	ENSSLUG00000008495	lhb (ENSSLUG00000008486)	ENSSLUG00000008482	lhb (ENSSLUG00000008476)	lhb (ENSSLUG00000008470)	ENSSLUG00000008462	ENSSLUG00000008458	ENSSLUG00000008457	ARFGEF3 (ENSSLUG00000005551)	HTR7 (ENSSLUG00000005164) #22	ENSSLUG00000005087 #23	ENSSLUG00000005061	ENSSLUG00000005042	ENSSLUG00000005037 #20
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000002090	ENSCGOG00000002083	ENSCGOG00000002079	ENSCGOG00000002078	ENSCGOG00000002072	ENSCGOG00000002070	ENSCGOG00000002066	lhb (ENSCGOG00000002004)	ENSCGOG00000001999	ENSCGOG00000001976	ENSCGOG00000001969	ENSCGOG00000001965	ENSCGOG00000001924	ENSCGOG00000001919	ARFGEF3 (ENSCGOG00000001682)	HTR7 (ENSCGOG00000001635) #22	ENSCGOG00000001629	ENSCGOG00000001595 #23	ENSCGOG00000022517	ENSCGOG00000022510	epas1b (ENSCGOG00000022481)	PRKCE (ENSCGOG00000022336)	ENSCGOG00000022319	ENSCGOG00000022248	GFRA1 (ENSCGOG00000022215)	si:ch1073-126c3.2 (ENSCGOG00000022213)	ENSCGOG00000022211	cplx2l (ENSCGOG00000022210)	ENSCGOG00000022208	ENSCGOG00000022207	setd4 (ENSCGOG00000022204)
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT01030000234633.C.a	ENSGT00940000155571.A	ENSGT00440000033965	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Lumpfish	MODERN SPECIES	6	cfap36 (ENSCLMG00005022417)	ppp4r3b (ENSCLMG00005022414)	PNPT1 (ENSCLMG00005022352)	CCDC88A (ENSCLMG00005022317)	ENSCLMG00005021447	ENSCLMG00005021413	SYNPO2L (ENSCLMG00005021403)	ENSCLMG00005021400	hhat (ENSCLMG00005021397)	KCNH1 (ENSCLMG00005021394)	mrpl57 (ENSCLMG00005021392)	cyp3c3 (ENSCLMG00005021389)	mmrn2a (ENSCLMG00005021388)	usp54a (ENSCLMG00005021385)	prorsd1 (ENSCLMG00005021383)	HTR7 (ENSCLMG00005021306) #22	ENSCLMG00005021302	ENSCLMG00005021299 #23	ENSCLMG00005021298	ENSCLMG00005021297	ANKRD1 (ENSCLMG00005021296) #20	pcgf5a (ENSCLMG00005021294) #19	HECTD2 (ENSCLMG00005021286) #18	ppp1r3ca (ENSCLMG00005021284) #17	ENSCLMG00005021282 #15	ENSCLMG00005021237	cyp26c1 (ENSCLMG00005021235) #7	ENSCLMG00005021231	slc22a15 (ENSCLMG00005021226)	ENSCLMG00005021225	kif11 (ENSCLMG00005021109) #10
Stickleback	MODERN SPECIES	6	cfap36 (ENSGACG00000010814)	ppp4r3b (ENSGACG00000010826)	PNPT1 (ENSGACG00000010840)	CCDC88A (ENSGACG00000010868)	ENSGACG00000010879	ENSGACG00000010892	SYNPO2L (ENSGACG00000010901)	ENSGACG00000010907	hhat (ENSGACG00000010922)	kcnh1a (ENSGACG00000010928)	mrpl57 (ENSGACG00000010947)	cyp3c3 (ENSGACG00000010952)	ENSGACG00000010976	usp54a (ENSGACG00000010981)	prorsd1 (ENSGACG00000010992)	HTR7 (ENSGACG00000010997) #22	ENSGACG00000011001	ENSGACG00000011003 #23	ANKRD1 (ENSGACG00000011020) #20	pcgf5a (ENSGACG00000011051) #19	HECTD2 (ENSGACG00000011058) #18	ppp1r3ca (ENSGACG00000011066) #17	ENSGACG00000011071 #15	ENSGACG00000011076	cyp26c1 (ENSGACG00000011080) #7	ENSGACG00000011092	slc22a15 (ENSGACG00000011099)	kif11 (ENSGACG00000011110) #10	EGR2 (ENSGACG00000011142)	adob (ENSGACG00000011146)	ENSGACG00000011151
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.f	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Gilthead seabream	MODERN SPECIES	6	ENSSAUG00010019120	ENSSAUG00010019121	ENSSAUG00010019123	ENSSAUG00010019125	ENSSAUG00010019128	ENSSAUG00010019131	COX20 (ENSSAUG00010019133)	lhb (ENSSAUG00010019134)	ENSSAUG00010019137	ENSSAUG00010019138	ENSSAUG00010019140	ENSSAUG00010019143	ENSSAUG00010019144	ENSSAUG00010019145	ARFGEF3 (ENSSAUG00010019157)	HTR7 (ENSSAUG00010019383) #22	ENSSAUG00010019385 #23	ENSSAUG00010019395	ENSSAUG00010019401	ANKRD1 (ENSSAUG00010019419) #20	pcgf5a (ENSSAUG00010019421) #19	HECTD2 (ENSSAUG00010019436) #18	ppp1r3ca (ENSSAUG00010019931) #17	FGFBP3 (ENSSAUG00010019934) #15	ENSSAUG00010019936	cyp26c1 (ENSSAUG00010019938) #7	ENSSAUG00010019946	ENSSAUG00010019990	ENSSAUG00010019992	ENSSAUG00010019995	ENSSAUG00010019999
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.f	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
European seabass	MODERN SPECIES	1	ENSDLAG00005032753	ENSDLAG00005006674	ENSDLAG00005027497	ENSDLAG00005032536	ENSDLAG00005006650	ENSDLAG00005006559	ENSDLAG00005006629	ENSDLAG00005032114	ENSDLAG00005006602	ENSDLAG00005028798	ENSDLAG00005006565	ENSDLAG00005031679	ENSDLAG00005013195	ENSDLAG00005005508	ENSDLAG00005004480	ENSDLAG00005004290 #22	ENSDLAG00005004172 #23	ENSDLAG00005004152	ENSDLAG00005028695	ENSDLAG00005018573	ZC3H15 (ENSDLAG00005018563)	ENSDLAG00005030646	DUSP19 (ENSDLAG00005018555)	NCKAP1 (ENSDLAG00005026891)	ENSDLAG00005030099	ENSDLAG00005033108	ENSDLAG00005018522	ENSDLAG00005018503	ENSDLAG00005018465	ENSDLAG00005018404	ENSDLAG00005018162
Large yellow croaker	MODERN SPECIES	28						sult6b1 (ENSLCRG00005019022)	ENSLCRG00005019024	adob (ENSLCRG00005019025)	EGR2 (ENSLCRG00005019026)	kif11 (ENSLCRG00005019027) #10	ENSLCRG00005019030	slc22a15 (ENSLCRG00005019032)	ENSLCRG00005019075	ENSLCRG00005019076	ARFGEF3 (ENSLCRG00005019090)	HTR7 (ENSLCRG00005019799) #22	ENSLCRG00005019801 #23	ENSLCRG00005019804 #23	ENSLCRG00005019805	ENSLCRG00005019806	cdh5 (ENSLCRG00005019807)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00990000205827	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Carangaria	ANCESTRAL SPECIES	32															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pleuronectoidei	ANCESTRAL SPECIES	48															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Turbot	MODERN SPECIES	6	ENSSMAG00000002162	ENSSMAG00000002212	ENSSMAG00000025912	ENSSMAG00000002242	ENSSMAG00000025524	ENSSMAG00000002271	ENSSMAG00000002304	ENSSMAG00000002318	ENSSMAG00000002327	ENSSMAG00000002336	ENSSMAG00000002417	ENSSMAG00000033544	ENSSMAG00000002503	ENSSMAG00000028119	ENSSMAG00000003763	ENSSMAG00000037769 #22	ENSSMAG00000027821 #23	ENSSMAG00000031522	ANKRD1 (ENSSMAG00000021778) #20	ENSSMAG00000025330	pcgf5a (ENSSMAG00000004039) #19	HECTD2 (ENSSMAG00000004065) #18	ppp1r3ca (ENSSMAG00000024368) #17	ENSSMAG00000004104 #15	ENSSMAG00000004109	ENSSMAG00000004124 #7	ENSSMAG00000004137	ENSSMAG00000004175	ENSSMAG00000033816	ENSSMAG00000036111	ENSSMAG00000029307
Tongue sole	MODERN SPECIES	3	ninl (ENSCSEG00000002867)	gins1 (ENSCSEG00000002860)	abhd12 (ENSCSEG00000002852)	pygb (ENSCSEG00000002842)	ENSCSEG00000002840	entpd6 (ENSCSEG00000002824)	ENSCSEG00000002812	ENSCSEG00000002807	ENSCSEG00000002806	ZNF365 (ENSCSEG00000002804)	adob (ENSCSEG00000002796)	EGR2 (ENSCSEG00000002793)	nkx1.2la (ENSCSEG00000002788)	GPR26 (ENSCSEG00000002783)	ARFGEF3 (ENSCSEG00000002766)	HTR7 (ENSCSEG00000002759) #22	ENSCSEG00000002746 #23	ENSCSEG00000002742	ENSCSEG00000002735	ANAPC1 (ENSCSEG00000002709)	vip (ENSCSEG00000002697)	fbxo5 (ENSCSEG00000002689)	MTRF1L (ENSCSEG00000002684)	desi2 (ENSCSEG00000002678)	ENSCSEG00000002669	ENSCSEG00000002662	mrpl57 (ENSCSEG00000002654)	KCNH1 (ENSCSEG00000002618)	hhat (ENSCSEG00000002610)	MYOZ1 (ENSCSEG00000002601)	SYNPO2L (ENSCSEG00000002595)
Carangaria_A	ANCESTRAL SPECIES	39	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00940000168266	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Seriola	ANCESTRAL SPECIES	144															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Yellowtail amberjack	MODERN SPECIES	1949																HTR7 (ENSSLDG00000004406) #22
Greater amberjack	MODERN SPECIES	55	acss1 (ENSSDUG00000004130)	apmap (ENSSDUG00000004176)	CST7 (ENSSDUG00000004191)	SYNDIG1 (ENSSDUG00000004206)	CUL7 (ENSSDUG00000004222)	ENSSDUG00000004331	ENSSDUG00000004358	ppp2r5d (ENSSDUG00000004373)	mea1 (ENSSDUG00000004418)	LRRC73 (ENSSDUG00000004427)	ENSSDUG00000004452	ENSSDUG00000004501	dnph1 (ENSSDUG00000004542)	yipf3 (ENSSDUG00000004560)	ARFGEF3 (ENSSDUG00000004588)	HTR7 (ENSSDUG00000004660) #22	ENSSDUG00000004734 #23	ENSSDUG00000005097	ANKRD1 (ENSSDUG00000005146) #20	ENSSDUG00000005170	pcgf5a (ENSSDUG00000005188) #19	ENSSDUG00000005211	HECTD2 (ENSSDUG00000005226) #18	ppp1r3ca (ENSSDUG00000005259) #17	ENSSDUG00000005267 #15	ENSSDUG00000005292	cyp26c1 (ENSSDUG00000005393) #7	ENSSDUG00000005414	ENSSDUG00000005430	slc22a15 (ENSSDUG00000005448)	kif11 (ENSSDUG00000005472) #10
Barramundi perch	MODERN SPECIES	141	PRKCE (ENSLCAG00010002348)	epas1b (ENSLCAG00010002330)	ENSLCAG00010002325	ENSLCAG00010002318	ENSLCAG00010002312	lhb (ENSLCAG00010002303)	ENSLCAG00010002298	ENSLCAG00010002295	ENSLCAG00010002293	ENSLCAG00010002289	ENSLCAG00010002287	ENSLCAG00010002283	ENSLCAG00010002280	ENSLCAG00010002278	ENSLCAG00010002191	HTR7 (ENSLCAG00010002160) #22	ENSLCAG00010002018	ANKRD1 (ENSLCAG00010002009) #20	pcgf5a (ENSLCAG00010002006) #19	HECTD2 (ENSLCAG00010001941) #18	ppp1r3ca (ENSLCAG00010001926) #17	FGFBP3 (ENSLCAG00010001923) #15	ENSLCAG00010001918	ENSLCAG00010001915	cyp26c1 (ENSLCAG00010001910) #7	ENSLCAG00010001904	ENSLCAG00010001902	ENSLCAG00010001899	ENSLCAG00010001894	slc22a15 (ENSLCAG00010001883)	ENSLCAG00010001875
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.m.b	ENSGT00940000164014.a.b.b.m.a	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000007106	ENSMAMG00000024375	ENSMAMG00000006995	ENSMAMG00000006944	ENSMAMG00000002532	ENSMAMG00000002365	ENSMAMG00000002354	ENSMAMG00000026745	ENSMAMG00000000488	ENSMAMG00000000455	ENSMAMG00000022630	ENSMAMG00000028606	ENSMAMG00000022625	ENSMAMG00000022627	ENSMAMG00000022616	ENSMAMG00000022613 #22	ENSMAMG00000022609 #23	ENSMAMG00000022606	ENSMAMG00000022605	ANKRD1 (ENSMAMG00000022599) #20	ENSMAMG00000022598	pcgf5a (ENSMAMG00000022596) #19	HECTD2 (ENSMAMG00000022591) #18	ppp1r3ca (ENSMAMG00000022590) #17	ENSMAMG00000025951 #15	ENSMAMG00000022588	ENSMAMG00000022586 #7	ENSMAMG00000022584	ENSMAMG00000022583	ENSMAMG00000022582	ENSMAMG00000022579
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.n	ENSGT00940000164014.a.b.b.m.a.a	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Siamese fighting fish	MODERN SPECIES	6	cbr1 (ENSBSLG00000023949)	ENSBSLG00000023962	ENSBSLG00000023984	ENSBSLG00000023987	si:ch1073-126c3.2 (ENSBSLG00000023996)	GFRA1 (ENSBSLG00000024003)	ENSBSLG00000024032	epas1b (ENSBSLG00000024044)	ENSBSLG00000024108	ENSBSLG00000024112	cox20 (ENSBSLG00000024119)	lhb (ENSBSLG00000013206)	ENSBSLG00000013296	ENSBSLG00000013306	ENSBSLG00000013323	ENSBSLG00000014052 #22	ENSBSLG00000014082 #23	ANKRD1 (ENSBSLG00000014214) #20	pcgf5a (ENSBSLG00000014229) #19	HECTD2 (ENSBSLG00000014249) #18	ppp1r3ca (ENSBSLG00000014462) #17	ENSBSLG00000014466 #15	ENSBSLG00000014645	ENSBSLG00000014667	ENSBSLG00000014692	ENSBSLG00000014812	slc22a15 (ENSBSLG00000014817)	ENSBSLG00000014862	kif11 (ENSBSLG00000014878) #10	EGR2 (ENSBSLG00000015085)	adob (ENSBSLG00000015087)
Climbing perch	MODERN SPECIES	6	ENSATEG00000017551	ENSATEG00000017742	ENSATEG00000017802	ENSATEG00000017828	ENSATEG00000017879	ENSATEG00000026193	ENSATEG00000027775	ENSATEG00000026087	ENSATEG00000018470	ENSATEG00000028353	ENSATEG00000018519	ENSATEG00000027275	ENSATEG00000018527	ENSATEG00000029615	ENSATEG00000018575	ENSATEG00000025862 #22	ENSATEG00000018739 #23	ANKRD1 (ENSATEG00000018886) #20	pcgf5a (ENSATEG00000018898) #19	HECTD2 (ENSATEG00000018921) #18	ENSATEG00000018980	ppp1r3ca (ENSATEG00000027000) #17	ENSATEG00000019000 #15	ENSATEG00000019011	ENSATEG00000019033 #7	ENSATEG00000019048	ENSATEG00000030196	ENSATEG00000028464	ENSATEG00000027736	ENSATEG00000019066	ENSATEG00000025262
Clupeocephala	ANCESTRAL SPECIES	82	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19
Euteleosteomorpha	ANCESTRAL SPECIES	88	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00730000111085.A	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a
Protacanthopterygii	ANCESTRAL SPECIES	126	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b.k.b #26	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00950000182946.lb.a #26
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	464													ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Coho salmon	MODERN SPECIES	17	asah2 (ENSOKIG00005023313)	sgms1b (ENSOKIG00005023210)	minpp1b (ENSOKIG00005023191)	atad1b (ENSOKIG00005023124)	ptenb (ENSOKIG00005022866)	rnls (ENSOKIG00005022766)	lipf (ENSOKIG00005022447) #32	STAMBPL1 (ENSOKIG00005022387) #36	acta2 (ENSOKIG00005022349)	ch25h (ENSOKIG00005022339) #33	ch25h (ENSOKIG00005022334) #33	ifit9 (ENSOKIG00005022327) #26	ENSOKIG00005022304	slc16a12b (ENSOKIG00005022295) #25	pank1b (ENSOKIG00005022224) #24	HTR7 (ENSOKIG00005022213) #22	ENSOKIG00005022101 #23	rpp30 (ENSOKIG00005021605) #21	ankrd1b (ENSOKIG00005021528) #20	pcgf5b (ENSOKIG00005021516) #19	HECTD2 (ENSOKIG00005021411) #18	ppp1r3cb (ENSOKIG00005021393) #17	TNKS2 (ENSOKIG00005017871) #16	ENSOKIG00005017722	ENSOKIG00005015507	noc3l (ENSOKIG00005014304)	plce1 (ENSOKIG00005014096)	SLC35G1 (ENSOKIG00005014048)	lgi1b (ENSOKIG00005013986)	ENSOKIG00005013974	fra10ac1 (ENSOKIG00005013902)
Chinook salmon	MODERN SPECIES	17	A1CF (ENSOTSG00005006693)	ENSOTSG00005006690	asah2 (ENSOTSG00005006679)	sgms1b (ENSOTSG00005006674)	minpp1b (ENSOTSG00005006673)	ENSOTSG00005006651	atad1b (ENSOTSG00005006228)	lipf (ENSOTSG00005004799) #32	STAMBPL1 (ENSOTSG00005004787) #36	acta2 (ENSOTSG00005004768)	ch25h (ENSOTSG00005004767) #33	ifit9 (ENSOTSG00005004766) #26	ifit9 (ENSOTSG00005004764) #26	slc16a12b (ENSOTSG00005004762) #25	pank1b (ENSOTSG00005004647) #24	ENSOTSG00005004645 #22	ENSOTSG00005004641 #23	rpp30 (ENSOTSG00005002960) #21	ankrd1b (ENSOTSG00005002888) #20	pcgf5b (ENSOTSG00005002879) #19	HECTD2 (ENSOTSG00005002656) #18	ppp1r3cb (ENSOTSG00005002568) #17	TNKS2 (ENSOTSG00005041685) #16	ENSOTSG00005041678	ENSOTSG00005037290	noc3l (ENSOTSG00005035685)	plce1 (ENSOTSG00005035666)	SLC35G1 (ENSOTSG00005035657)	lgi1b (ENSOTSG00005035653)	fra10ac1 (ENSOTSG00005035647)	pde6c (ENSOTSG00005032627)
Rainbow trout	MODERN SPECIES	12	sgms1b (ENSOMYG00000015549)	ENSOMYG00000068829	MINPP1 (ENSOMYG00000015566)	atad1b (ENSOMYG00000015572)	ENSOMYG00000015612	ENSOMYG00000015734	ENSOMYG00000015705	lipf (ENSOMYG00000015784) #32	STAMBPL1 (ENSOMYG00000016360) #36	acta2 (ENSOMYG00000016388)	ch25h (ENSOMYG00000016396) #33	ch25h (ENSOMYG00000016399) #33	ifit9 (ENSOMYG00000016409) #26	slc16a12b (ENSOMYG00000016431) #25	pank1b (ENSOMYG00000016459) #24	ENSOMYG00000016549 #22	ENSOMYG00000016554 #23	rpp30 (ENSOMYG00000016592) #21	ankrd1b (ENSOMYG00000017032) #20	pcgf5b (ENSOMYG00000017040) #19	HECTD2 (ENSOMYG00000017106) #18	ppp1r3cb (ENSOMYG00000017271) #17	TNKS2 (ENSOMYG00000017426) #16	ENSOMYG00000018910	ENSOMYG00000018970	noc3l (ENSOMYG00000019566)	ENSOMYG00000011574	plce1 (ENSOMYG00000021696)	SLC35G1 (ENSOMYG00000069145)	lgi1b (ENSOMYG00000021896)	ENSOMYG00000071221
Salmo	ANCESTRAL SPECIES	31	ENSGT00940000154704.d.b.z.b.b	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s.b #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
River trout	MODERN SPECIES	1	PRKG1 (ENSSTUG00000030007)	asah2 (ENSSTUG00000029837)	sgms1b (ENSSTUG00000029819)	A1CF (ENSSTUG00000029748)	atad1b (ENSSTUG00000029487)	ENSSTUG00000029437	rnls (ENSSTUG00000029420)	lipf (ENSSTUG00000028446) #32	STAMBPL1 (ENSSTUG00000028373) #36	acta2 (ENSSTUG00000028343)	ch25h (ENSSTUG00000028337) #33	ch25h (ENSSTUG00000028330) #33	ifit9 (ENSSTUG00000028324) #26	slc16a12b (ENSSTUG00000028198) #25	pank1b (ENSSTUG00000028131) #24	HTR7 (ENSSTUG00000028123) #22	ENSSTUG00000028094 #23	rpp30 (ENSSTUG00000027959) #21	ankrd1b (ENSSTUG00000027947) #20	pcgf5b (ENSSTUG00000027933) #19	HECTD2 (ENSSTUG00000027869) #18	ppp1r3cb (ENSSTUG00000027861) #17	TNKS2 (ENSSTUG00000025727) #16	ENSSTUG00000025654	ENSSTUG00000023551	noc3l (ENSSTUG00000021934)	plce1 (ENSSTUG00000021408)	SLC35G1 (ENSSTUG00000021392)	lgi1b (ENSSTUG00000021343)	fra10ac1 (ENSSTUG00000021184)	pde6c (ENSSTUG00000018969)
Atlantic salmon	MODERN SPECIES	20	PRKG1 (ENSSSAG00000070265)	A1CF (ENSSSAG00000070249)	asah2 (ENSSSAG00000069141)	minpp1b (ENSSSAG00000086246)	atad1b (ENSSSAG00000069025)	ptenb (ENSSSAG00000068992)	rnls (ENSSSAG00000115824)	rnls (ENSSSAG00000068984)	lich (ENSSSAG00000068628) #32	STAMBPL1 (ENSSSAG00000114861) #36	acta2 (ENSSSAG00000068379)	ch25h (ENSSSAG00000068373) #33	ifit9 (ENSSSAG00000068365) #26	slc16a12b (ENSSSAG00000068354) #25	pank1b (ENSSSAG00000113557) #24	ENSSSAG00000113948 #22	ENSSSAG00000068302 #23	rpp30 (ENSSSAG00000068280) #21	rpp30 (ENSSSAG00000068290) #21	ankrd1b (ENSSSAG00000068271) #20	pcgf5b (ENSSSAG00000116687) #19	ENSSSAG00000088361	hecd2 (ENSSSAG00000068133) #18	ppp1r3cb (ENSSSAG00000120374) #17	TNKS2 (ENSSSAG00000067042) #16	ENSSSAG00000067017	tbc1d12 (ENSSSAG00000064107)	noc3l (ENSSSAG00000082464)	plce1 (ENSSSAG00000063853)	slc35g1 (ENSSSAG00000063829)	lgi1b (ENSSSAG00000063797)
Huchen	MODERN SPECIES	2498											ENSHHUG00000038412	ifit9 (ENSHHUG00000038395) #26	ifit9 (ENSHHUG00000038394) #26	slc16a12b (ENSHHUG00000038392) #25	pank1b (ENSHHUG00000038201) #24	HTR7 (ENSHHUG00000038190) #22
Salmoninae	ANCESTRAL SPECIES	371	ENSGT00940000158306.e.b	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
Salmo	ANCESTRAL SPECIES	3	ENSGT00940000158306.e.b	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
River trout	MODERN SPECIES	11	minpp1b (ENSSTUG00000019854)	papss2b (ENSSTUG00000019894)	atad1b (ENSSTUG00000020648)	ptenb (ENSSTUG00000020846)	rnls (ENSSTUG00000020942)	lipf (ENSSTUG00000020954) #32	ankrd22 (ENSSTUG00000020992) #37	STAMBPL1 (ENSSTUG00000021026) #36	acta2 (ENSSTUG00000021065)	ch25h (ENSSTUG00000021191) #33	ifit9 (ENSSTUG00000021202) #26	ifit9 (ENSSTUG00000021205) #26	ifit10 (ENSSTUG00000021212) #26	slc16a12b (ENSSTUG00000021219) #25	pank1b (ENSSTUG00000021228) #24	ENSSTUG00000021310 #22	ENSSTUG00000021337 #23	rpp30 (ENSSTUG00000021371) #21	ankrd1b (ENSSTUG00000021402) #20	pcgf5b (ENSSTUG00000021414) #19	HECTD2 (ENSSTUG00000021437) #18	ppp1r3cb (ENSSTUG00000021484) #17	ENSSTUG00000021491	ENSSTUG00000021513	noc3l (ENSSTUG00000021760)	plce1 (ENSSTUG00000021837)	SLC35G1 (ENSSTUG00000022842)	lgi1b (ENSSTUG00000022854)	pde6c (ENSSTUG00000023045)	rbp4 (ENSSTUG00000024776)	cep55l (ENSSTUG00000024840)
Atlantic salmon	MODERN SPECIES	10	minpp1b (ENSSSAG00000099627)	papss2b (ENSSSAG00000078629)	atad1b (ENSSSAG00000078880)	ENSSSAG00000078896	rnls (ENSSSAG00000092349)	lipf (ENSSSAG00000078919) #32	ankrd22 (ENSSSAG00000079009) #37	STAMBPL1 (ENSSSAG00000115451) #36	acta2 (ENSSSAG00000044179)	ch25h (ENSSSAG00000105272) #33	ENSSSAG00000107948	ifit9 (ENSSSAG00000079026) #26	ifit10 (ENSSSAG00000079036) #26	slc16a12b (ENSSSAG00000079037) #25	pank1b (ENSSSAG00000079040) #24	ENSSSAG00000098816 #22	ENSSSAG00000079056 #23	rpp30 (ENSSSAG00000079083) #21	ankrd1 (ENSSSAG00000079087) #20	pcgf5b (ENSSSAG00000079093) #19	hectd2 (ENSSSAG00000079102) #18	ppp1r3cb (ENSSSAG00000118758) #17	ENSSSAG00000079156	ENSSSAG00000006207	noc3l (ENSSSAG00000006575)	plce1 (ENSSSAG00000006714)	SLC35G1 (ENSSSAG00000084489)	lgi1b (ENSSSAG00000007186)	pde6c (ENSSSAG00000007238)	rbp4 (ENSSSAG00000007721)	cep55l (ENSSSAG00000007731)
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT00390000009613.a	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT00390000018409.g.b	ENSGT00390000009613.a	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b	ENSGT00940000154741.d.n
Chinook salmon	MODERN SPECIES	16	sgms1b (ENSOTSG00005019983)	minpp1b (ENSOTSG00005019984)	papss2b (ENSOTSG00005020004)	atad1b (ENSOTSG00005023553)	ENSOTSG00005023571	rnls (ENSOTSG00005023575)	lipf (ENSOTSG00005023583) #32	ankrd22 (ENSOTSG00005023589) #37	STAMBPL1 (ENSOTSG00005023593) #36	ACTA2 (ENSOTSG00005023595) #35	ch25h (ENSOTSG00005023596) #33	ifit9 (ENSOTSG00005023597) #26	ifit10 (ENSOTSG00005023598) #26	slc16a12b (ENSOTSG00005023599) #25	pank1b (ENSOTSG00005023600) #24	HTR7 (ENSOTSG00005023602) #22	ENSOTSG00005023603 #23	rpp30 (ENSOTSG00005023604) #21	ankrd1b (ENSOTSG00005023605) #20	pcgf5b (ENSOTSG00005023606) #19	HECTD2 (ENSOTSG00005023621) #18	ppp1r3cb (ENSOTSG00005023625) #17	ENSOTSG00005023627	ENSOTSG00005023630	plce1 (ENSOTSG00005023678)	ENSOTSG00005023831	SLC35G1 (ENSOTSG00005023833)	lgi1b (ENSOTSG00005023834)	pde6c (ENSOTSG00005003183)	rbp4 (ENSOTSG00005013615)	cep55l (ENSOTSG00005013616)
Coho salmon	MODERN SPECIES	12	minpp1b (ENSOKIG00005006024)	papss2b (ENSOKIG00005006074)	atad1b (ENSOKIG00005006711)	ptenb (ENSOKIG00005006734)	rnls (ENSOKIG00005006807)	lipf (ENSOKIG00005006837) #32	ankrd22 (ENSOKIG00005006914) #37	STAMBPL1 (ENSOKIG00005006941) #36	ENSOKIG00005006980	acta2 (ENSOKIG00005007003)	ch25h (ENSOKIG00005007147) #33	ifit9 (ENSOKIG00005007160) #26	ifit10 (ENSOKIG00005007185) #26	slc16a12b (ENSOKIG00005007195) #25	pank1b (ENSOKIG00005007284) #24	ENSOKIG00005007323 #22	ENSOKIG00005007330 #23	rpp30 (ENSOKIG00005007342) #21	ankrd1b (ENSOKIG00005007352) #20	pcgf5b (ENSOKIG00005007395) #19	HECTD2 (ENSOKIG00005007420) #18	ppp1r3cb (ENSOKIG00005007665) #17	ENSOKIG00005007674	ENSOKIG00005007698	plce1 (ENSOKIG00005007878)	SLC35G1 (ENSOKIG00005008435)	lgi1b (ENSOKIG00005008445)	pde6c (ENSOKIG00005008772)	rbp4 (ENSOKIG00005014051)	myof (ENSOKIG00005014542)	ENSOKIG00005030600
Rainbow trout	MODERN SPECIES	7	lipf (ENSOMYG00000013606) #32	ankrd22 (ENSOMYG00000013746) #37	ENSOMYG00000067337	STAMBPL1 (ENSOMYG00000013771) #36	acta2 (ENSOMYG00000013827)	ENSOMYG00000013950	ch25h (ENSOMYG00000013956) #33	ENSOMYG00000048512	ifit9 (ENSOMYG00000016609) #26	ifit9 (ENSOMYG00000016615) #26	ifit9 (ENSOMYG00000071713) #26	ifit10 (ENSOMYG00000016652) #26	slc16a12b (ENSOMYG00000016656) #25	ENSOMYG00000049064	pank1b (ENSOMYG00000016671) #24	ENSOMYG00000016721 #22	ENSOMYG00000016727 #23	rpp30 (ENSOMYG00000016794) #21	ankrd1b (ENSOMYG00000016831) #20	pcgf5b (ENSOMYG00000016857) #19	HECTD2 (ENSOMYG00000016911) #18	ENSOMYG00000059077	ENSOMYG00000069770	ppp1r3cb (ENSOMYG00000065271) #17	ENSOMYG00000017275	ENSOMYG00000017285	noc3l (ENSOMYG00000057529)	plce1 (ENSOMYG00000017418)	lgi1b (ENSOMYG00000018546)	ENSOMYG00000057224	pde6c (ENSOMYG00000019534)
Huchen	MODERN SPECIES	1942														slc16a12b (ENSHHUG00000022005) #25	pank1b (ENSHHUG00000021986) #24	ENSHHUG00000021980 #22	ENSHHUG00000021906 #23	ENSHHUG00000021895	ankrd1b (ENSHHUG00000021871) #20	pcgf5b (ENSHHUG00000021851) #19	HECTD2 (ENSHHUG00000021820) #18
Northern pike	MODERN SPECIES	4	papss2b (ENSELUG00000003284)	atad1b (ENSELUG00000003303)	ENSELUG00000003315	rnls (ENSELUG00000003342)	lipf (ENSELUG00000003363) #32	STAMBPL1 (ENSELUG00000003414) #36	ACTA2 (ENSELUG00000003448) #35	ch25h (ENSELUG00000030905) #33	ifit9 (ENSELUG00000030573) #26	ch25h (ENSELUG00000030598) #33	ch25h (ENSELUG00000027120) #33	ifit9 (ENSELUG00000003551) #26	ifit10 (ENSELUG00000003625) #26	slc16a12b (ENSELUG00000033464) #25	pank1b (ENSELUG00000003659) #24	HTR7 (ENSELUG00000030806) #22	ENSELUG00000003704 #23	rpp30 (ENSELUG00000003731) #21	ankrd1b (ENSELUG00000003750) #20	pcgf5b (ENSELUG00000003772) #19	ENSELUG00000033205	HECTD2 (ENSELUG00000003815) #18	ppp1r3cb (ENSELUG00000003844) #17	TNKS2 (ENSELUG00000003897) #16	ENSELUG00000003919	ENSELUG00000003975	ENSELUG00000030953	ENSELUG00000032803	noc3l (ENSELUG00000004023)	plce1 (ENSELUG00000004174)	SLC35G1 (ENSELUG00000004227)
Otomorpha	ANCESTRAL SPECIES	79	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Otophysi	ANCESTRAL SPECIES		ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a.e #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00940000155825.p	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000160739	ENSGT00390000002808
Channel catfish	MODERN SPECIES	4	minpp1 (ENSIPUG00000003342)	PAPSS2 (ENSIPUG00000003346)	atad1b (ENSIPUG00000003383)	PTEN (ENSIPUG00000003433)	rnls (ENSIPUG00000003450)	lipf (ENSIPUG00000003479) #32	ankrd22 (ENSIPUG00000003527) #37	stambpl1 (ENSIPUG00000003570) #36	acta2 (ENSIPUG00000003669)	ch25h (ENSIPUG00000003689) #33	ENSIPUG00000003700 #26	ENSIPUG00000003709 #26	ENSIPUG00000003767 #26	slc16a12b (ENSIPUG00000003779) #25	PANK1 (ENSIPUG00000003795) #24	HTR7 (ENSIPUG00000003823) #22	kif20b (ENSIPUG00000003832) #23	rpp30 (ENSIPUG00000003863) #21	ankrd1 (ENSIPUG00000003900) #20	pcgf5a (ENSIPUG00000003929) #19	hectd2 (ENSIPUG00000003970) #18	ppp1r3cb (ENSIPUG00000004006) #17	MPP3 (ENSIPUG00000004019)	muc13b (ENSIPUG00000004055)	znf281 (ENSIPUG00000004070)	ENSIPUG00000004081	ENSIPUG00000004086	ENSIPUG00000004099	nmt1b (ENSIPUG00000004204)	PLCD3 (ENSIPUG00000004236)	acbd4 (ENSIPUG00000004299)
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT00940000155825.p	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000160739	ENSGT00390000002808
Electric eel	MODERN SPECIES	204	CYTH3 (ENSEEEG00000010346)	minpp1b (ENSEEEG00000010376)	papss2b (ENSEEEG00000010384)	atad1b (ENSEEEG00000010403)	ptenb (ENSEEEG00000010416)	rnls (ENSEEEG00000010492)	lipf (ENSEEEG00000010496) #32	ankrd22 (ENSEEEG00000010501) #37	STAMBPL1 (ENSEEEG00000010505) #36	acta2 (ENSEEEG00000010838)	ch25h (ENSEEEG00000014819) #33	ENSEEEG00000014821 #26	ENSEEEG00000014822 #26	slc16a12b (ENSEEEG00000014824) #25	pank1b (ENSEEEG00000014827) #24	ENSEEEG00000014831 #22	ENSEEEG00000014869 #23	rpp30 (ENSEEEG00000014870) #21	ankrd1b (ENSEEEG00000014872) #20	pcgf5b (ENSEEEG00000014876) #19	HECTD2 (ENSEEEG00000014888) #18	ppp1r3cb (ENSEEEG00000014973) #17	MPP3 (ENSEEEG00000014974)	znf281b (ENSEEEG00000014976)	ENSEEEG00000014977	ENSEEEG00000014980	nmt1b (ENSEEEG00000014981)	PLCD3 (ENSEEEG00000015012)	acbd4 (ENSEEEG00000015240)	hexim1 (ENSEEEG00000015241)	ENSEEEG00000015242
Characoidei	ANCESTRAL SPECIES	50	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696.a #32	ENSGT00390000009005 #37	ENSGT00940000154696.b #32	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000156993.c.e	ENSGT00940000160739
Red-bellied piranha	MODERN SPECIES	695																HTR7 (ENSPNAG00000014756) #22	ENSPNAG00000014774 #23	rpp30 (ENSPNAG00000014804) #21	ankrd1b (ENSPNAG00000003329) #20	pcgf5b (ENSPNAG00000014964) #19	HECTD2 (ENSPNAG00000015035) #18	ppp1r3cb (ENSPNAG00000015041) #17
Mexicana tetra	MODERN SPECIES	19														slc16a12b (ENSAMXG00000035555) #25	pank1b (ENSAMXG00000007727) #24	ENSAMXG00000007726 #22	ENSAMXG00000007718 #23	rpp30 (ENSAMXG00000040653) #21	ankrd1b (ENSAMXG00000007712) #20	pcgf5b (ENSAMXG00000043388) #19	HECTD2 (ENSAMXG00000007707) #18	ppp1r3cb (ENSAMXG00000031030) #17	MPP3 (ENSAMXG00000034993)	muc13b (ENSAMXG00000036326)	ENSAMXG00000029637	ENSAMXG00000034126	znf281b (ENSAMXG00000032511)	ENSAMXG00000042244	ENSAMXG00000006250	nmt1b (ENSAMXG00000006265)	PLCD3 (ENSAMXG00000006275)
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00390000018409.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a.e.c #26	ENSGT00950000182946.lb.a.e.d.b #26	ENSGT00950000182946.lb.a.e.d.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	749																ENSGT01010000222287.B.a.a.a.a.a.b.c #22	ENSGT00940000155989.d.i #23	ENSGT00390000000883.r #21	ENSGT00940000153956.a.a.a #20	ENSGT00940000155896.l.a #19	ENSGT00940000157750.y #18	ENSGT00940000155648.B.a.a #17	ENSGT00940000157190.d.b	ENSGT00940000165769	ENSGT00940000161586.d.b
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000154596.b.r	ENSGT00940000155825.p.b	ENSGT00390000009613.a.u.b	ENSGT00550000074823.b.a.h	ENSGT00940000154335.b.f.a	ENSGT00390000016052.s	ENSGT00940000154696.d #32	ENSGT00390000009005.d #37	ENSGT00940000153710.b.k #36	ENSGT00940000154710.a.a.a	ENSGT00950000182946.lb.a.e.c.b #26	ENSGT00950000182946.lb.a.e.d.b.b #26	ENSGT00950000182946.lb.a.e.d.a #26	ENSGT00940000156169.a.a.a #25	ENSGT00940000157373.k.d #24	ENSGT01010000222287.B.a.a.a.a.a.b.c #22	ENSGT00940000155989.d.i #23	ENSGT00390000000883.r #21	ENSGT00940000153956.a.a.a #20	ENSGT00940000155896.l.a #19	ENSGT00940000157750.y #18	ENSGT00940000155648.B.a.a #17	ENSGT00940000157190.d.b	ENSGT00940000165769	ENSGT00940000161586.d.b
Golden-line barbel	MODERN SPECIES	56	ENSSGRG00000008885	CYTH3 (ENSSGRG00000008931)	papss2b (ENSSGRG00000012270)	atad1b (ENSSGRG00000012359)	ENSSGRG00000012509	ptenb (ENSSGRG00000012511)	rnls (ENSSGRG00000012563)	lipf (ENSSGRG00000012564) #32	ankrd22 (ENSSGRG00000012743) #37	STAMBPL1 (ENSSGRG00000012744) #36	acta2 (ENSSGRG00000012968)	ifit10 (ENSSGRG00000015868) #26	ifit11 (ENSSGRG00000015869) #26	slc16a12b (ENSSGRG00000015870) #25	pank1b (ENSSGRG00000015877) #24	HTR7 (ENSSGRG00000015879) #22	ENSSGRG00000015901 #23	rpp30 (ENSSGRG00000015903) #21	ankrd1b (ENSSGRG00000015914) #20	pcgf5b (ENSSGRG00000015916) #19	HECTD2 (ENSSGRG00000015921) #18	ppp1r3cb (ENSSGRG00000016122) #17	MPP3 (ENSSGRG00000016125)	ENSSGRG00000016160	ENSSGRG00000016163	znf281b (ENSSGRG00000016164)	ENSSGRG00000016165	fkbp7 (ENSSGRG00000016166)	COL5A2 (ENSSGRG00000016186)	gulp1a (ENSSGRG00000016261)	tfpia (ENSSGRG00000016304)
Common carp reference	MODERN SPECIES	25	ENSCCRG00000040013	ENSCCRG00000077505	papss2b (ENSCCRG00000024874)	atad1b (ENSCCRG00000041854)	ptenb (ENSCCRG00000082140)	rnls (ENSCCRG00000025037)	lipf (ENSCCRG00000025044) #32	ankrd22 (ENSCCRG00000031810) #37	STAMBPL1 (ENSCCRG00000016476) #36	acta2 (ENSCCRG00000016502)	ifit9 (ENSCCRG00000017334) #26	ifit11 (ENSCCRG00000073912) #26	ifit12 (ENSCCRG00000049203) #26	slc16a12b (ENSCCRG00000070698) #25	pank1b (ENSCCRG00000051621) #24	ENSCCRG00000057385 #22	ENSCCRG00000065554	ENSCCRG00000035242 #23	ankrd1b (ENSCCRG00000035265) #20	rpp30 (ENSCCRG00000035247) #21	pcgf5b (ENSCCRG00000061913) #19	HECTD2 (ENSCCRG00000005742) #18	ppp1r3cb (ENSCCRG00000078319) #17	ENSCCRG00000005407	ENSCCRG00000057338	ENSCCRG00000005502	znf281b (ENSCCRG00000014264)	ENSCCRG00000082457	ENSCCRG00000074458	ENSCCRG00000055824	ENSCCRG00000063617
Goldfish	MODERN SPECIES	3	BICRAL (ENSCARG00000002880)	ENSCARG00000002887	si:dkey-21c1.1 (ENSCARG00000002892)	TEPSIN (ENSCARG00000002906)	ndufaf8 (ENSCARG00000002991)	SLC38A10 (ENSCARG00000003033)	ENSCARG00000003120	BAHCC1 (ENSCARG00000003131)	fscn2b (ENSCARG00000003160)	birc5a (ENSCARG00000003169)	TMEM235 (ENSCARG00000003175)	tha1 (ENSCARG00000003180)	socs3b (ENSCARG00000003201)	PGS1 (ENSCARG00000003207)	cyth1b (ENSCARG00000003240)	HTR7 (ENSCARG00000003268) #22	ENSCARG00000003277 #23	rpp30 (ENSCARG00000003300) #21	ankrd1b (ENSCARG00000003339) #20	pcgf5b (ENSCARG00000003346) #19	HECTD2 (ENSCARG00000003356) #18	ppp1r3cb (ENSCARG00000003367) #17	ENSCARG00000003376	desi1b (ENSCARG00000003378)	xrcc6 (ENSCARG00000003391)	josd1 (ENSCARG00000003441)	ENSCARG00000003445	EP300 (ENSCARG00000003476)	l3mbtl2 (ENSCARG00000003695)	chadlb (ENSCARG00000004193)	rangap1b (ENSCARG00000004218)
Cyprininae	ANCESTRAL SPECIES	36	ENSGT00940000154596.b.q	ENSGT00940000155825.p.a	ENSGT00390000009613.a.u.a	ENSGT00550000074823.b.a.g	ENSGT00940000154335.b.f.b	ENSGT00390000016052.t	ENSGT00940000154696.c #32	ENSGT00390000009005.c #37	ENSGT00940000153710.b.l #36	ENSGT00940000154710.a.a.b	ENSGT00940000162142.d.c #33	ENSGT00950000182946.lb.a.e.c #26	ENSGT00950000182946.lb.a.e.d.b.a #26	ENSGT00940000156169.a.a.b #25	ENSGT00940000157373.k.c #24	ENSGT01010000222287.B.a.a.a.a.a.b.d #22	ENSGT00940000155989.d.j #23	ENSGT00390000000883.q #21	ENSGT00940000153956.a.a.b #20	ENSGT00940000155896.l.b #19	ENSGT00940000157750.z #18	ENSGT00940000155648.B.a.b #17	ENSGT00940000157190.d.a	ENSGT00710000106813.B.b.a	ENSGT00940000161586.d.a	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808.l
Cyprininae_a	ANCESTRAL SPECIES	37	ENSGT00940000155825.p.a	ENSGT00390000009613.a.u.a	ENSGT00550000074823.b.a.g.a	ENSGT00550000074823.b.a.g.b	ENSGT00940000163053.d	ENSGT00390000016052.t	ENSGT00940000154696.c #32	ENSGT00390000009005.c #37	ENSGT00940000153710.b.l #36	ENSGT00940000154710.a.a.b	ENSGT00940000162142.d.c #33	ENSGT00950000182946.lb.a.e.c.a #26	ENSGT00950000182946.lb.a.e.d.b.a #26	ENSGT00940000156169.a.a.b #25	ENSGT00940000157373.k.c #24	ENSGT01010000222287.B.a.a.a.a.a.b.d #22	ENSGT00940000155989.d.j #23	ENSGT00390000000883.q #21	ENSGT00940000153956.a.a.b #20	ENSGT00940000155896.l.b #19	ENSGT00940000157750.z #18	ENSGT00940000155648.B.a.b #17	ENSGT00940000157190.d.a	ENSGT00710000106813.B.b.a	ENSGT00940000161586.d.a	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808.l
Common carp reference	MODERN SPECIES	44	papss2b (ENSCCRG00000077451)	atad1b (ENSCCRG00000069922)	atad1b (ENSCCRG00000042064)	ENSCCRG00000040790	rnls (ENSCCRG00000031808)	lipf (ENSCCRG00000017387) #32	ENSCCRG00000067356	ankrd22 (ENSCCRG00000017391) #37	STAMBPL1 (ENSCCRG00000017397) #36	acta2 (ENSCCRG00000064755)	ch25h (ENSCCRG00000017332) #33	ifit10 (ENSCCRG00000017422) #26	ifit11 (ENSCCRG00000057220) #26	slc16a12b (ENSCCRG00000017427) #25	pank1b (ENSCCRG00000017433) #24	ENSCCRG00000047522 #22	ENSCCRG00000073919 #23	rpp30 (ENSCCRG00000018350) #21	ankrd1b (ENSCCRG00000018378) #20	pcgf5b (ENSCCRG00000035272) #19	HECTD2 (ENSCCRG00000046734) #18	ppp1r3cb (ENSCCRG00000063719) #17	ENSCCRG00000046778	muc13b (ENSCCRG00000046798)	znf281b (ENSCCRG00000068444)	ENSCCRG00000057785	ENSCCRG00000026521	PLCD3 (ENSCCRG00000054676)	nmt1b (ENSCCRG00000070594)	acbd4 (ENSCCRG00000025027)	hexim1 (ENSCCRG00000061552)
Golden-line barbel	MODERN SPECIES	179	CYTH3 (ENSSGRG00000031597)	ENSSGRG00000031596	papss2b (ENSSGRG00000030116)	atad1b (ENSSGRG00000030003)	atad1b (ENSSGRG00000030002)	ENSSGRG00000029994	rnls (ENSSGRG00000029989)	lipf (ENSSGRG00000029748) #32	ankrd22 (ENSSGRG00000029988) #37	STAMBPL1 (ENSSGRG00000029431) #36	acta2 (ENSSGRG00000029427)	ch25h (ENSSGRG00000029426) #33	ifit10 (ENSSGRG00000029424) #26	slc16a12b (ENSSGRG00000029422) #25	pank1b (ENSSGRG00000029401) #24	HTR7 (ENSSGRG00000029398) #22	ENSSGRG00000029397 #23	ENSSGRG00000029396	rpp30 (ENSSGRG00000029376) #21	pcgf5b (ENSSGRG00000029372) #19	HECTD2 (ENSSGRG00000029245) #18	MPP3 (ENSSGRG00000029225)	muc13b (ENSSGRG00000029223)	znf281b (ENSSGRG00000029222)
Goldfish	MODERN SPECIES	30	ENSCARG00000009655	atad1b (ENSCARG00000009611)	ptenb (ENSCARG00000009539)	rnls (ENSCARG00000009503)	lipf (ENSCARG00000007830) #32	STAMBPL1 (ENSCARG00000007744) #36	acta2 (ENSCARG00000007728)	ch25h (ENSCARG00000007722) #33	ch25h (ENSCARG00000007714) #33	ifit10 (ENSCARG00000007711) #26	papss2b (ENSCARG00000007059)	ifit10 (ENSCARG00000007012) #26	ifit11 (ENSCARG00000007006) #26	slc16a12b (ENSCARG00000006992) #25	pank1b (ENSCARG00000006974) #24	ENSCARG00000006967 #22	ENSCARG00000006909 #23	rpp30 (ENSCARG00000006868) #21	ENSCARG00000006836	pcgf5b (ENSCARG00000006827) #19	ENSCARG00000006824	HECTD2 (ENSCARG00000006755) #18	ppp1r3cb (ENSCARG00000006741) #17	MPP3 (ENSCARG00000006667)	ENSCARG00000006653	muc13b (ENSCARG00000006619)	znf281b (ENSCARG00000006582)	ENSCARG00000006572	ENSCARG00000006564	ENSCARG00000006554	ENSCARG00000006378
Zebrafish	MODERN SPECIES	3	ifit12 (ENSDARG00000090977) #26	slc16a12b (ENSDARG00000089885) #25	pank1b (ENSDARG00000010098) #24	zgc:174153 (ENSDARG00000079376)	zgc:174855 (ENSDARG00000094559)	si:dkey-26g8.5 (ENSDARG00000089750)	ENSDARG00000095072	si:dkey-269i1.4 (ENSDARG00000095744)	zgc:174154 (ENSDARG00000075527)	MGC174155 (ENSDARG00000087651)	wu:fa26c03 (ENSDARG00000074306)	ENSDARG00000089806	ENSDARG00000039173	si:dkey-239j18.2 (ENSDARG00000095254)	ENSDARG00000100833	HTR7 (ENSDARG00000099854) #22	ENSDARG00000040110 #23	rpp30 (ENSDARG00000027428) #21	ankrd1b (ENSDARG00000076192) #20	pcgf5b (ENSDARG00000052388) #19	HECTD2 (ENSDARG00000061194) #18	ppp1r3cb (ENSDARG00000014554) #17	MPP3 (ENSDARG00000062667)	ENSDARG00000007906	muc13b (ENSDARG00000079647)	znf281b (ENSDARG00000035910)	ENSDARG00000062672	ENSDARG00000102056	nmt1b (ENSDARG00000057206)	PLCD3 (ENSDARG00000079572)	acbd4 (ENSDARG00000027070)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Denticle herring	MODERN SPECIES	94										SMOC2 (ENSDCDG00000016624)	dact2 (ENSDCDG00000016642)	ablim1a (ENSDCDG00000016683)	SLC16A12 (ENSDCDG00000019725) #25	pank1a (ENSDCDG00000019730) #24	zgc:65997 (ENSDCDG00000019735)	ENSDCDG00000019737 #22
Elephant shark	MODERN SPECIES	1488	sgms1a (ENSCMIG00000019185)	minpp1b (ENSCMIG00000019184)	papss2b (ENSCMIG00000019164)	atad1b (ENSCMIG00000019152)	ptenb (ENSCMIG00000019147)	rnls (ENSCMIG00000019143)	lipf (ENSCMIG00000019110) #32	ankrd22 (ENSCMIG00000019064) #37	STAMBPL1 (ENSCMIG00000019048) #36	acta2 (ENSCMIG00000018932) #35	ENSCMIG00000018889 #34	ch25h (ENSCMIG00000018886) #33	ENSCMIG00000018884 #26	slc16a12b (ENSCMIG00000018882) #25	pank1b (ENSCMIG00000018879) #24	HTR7 (ENSCMIG00000018875) #22	ENSCMIG00000018873 #23	ENSCMIG00000018870 #23	ENSCMIG00000018867 #23	rpp30 (ENSCMIG00000018865) #21	ankrd1b (ENSCMIG00000018862) #20	pcgf5b (ENSCMIG00000018860) #19	HECTD2 (ENSCMIG00000018856) #18	ppp1r3cb (ENSCMIG00000018854) #17	TNKS2 (ENSCMIG00000018779) #16	ENSCMIG00000018733	ENSCMIG00000018731	TBC1D12 (ENSCMIG00000018661)	noc3l (ENSCMIG00000018543)	plce1 (ENSCMIG00000018450)	SLC35G1 (ENSCMIG00000018420)