Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	5	ENSGT00940000158306	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896 #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825
Euteleostomi	ANCESTRAL SPECIES	4	ENSGT00390000018409	ENSGT00390000009613.a	ENSGT00550000074823.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896 #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833
Sarcopterygii	ANCESTRAL SPECIES	13	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23
Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000154696 #32	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a	ENSGT00390000009613.a
Amniota	ANCESTRAL SPECIES	10	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a
Mammalia	ANCESTRAL SPECIES	34	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00390000016052	ENSGT00940000154335.b	ENSGT00550000074823.a	ENSGT00390000009613.a
Theria	ANCESTRAL SPECIES	21	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Eutheria	ANCESTRAL SPECIES	13	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Glires	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161748	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Murinae	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Mus	ANCESTRAL SPECIES		ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b.c.b #28	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.c.b.b.c.a #30	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Mouse	MODERN SPECIES	10	Cyp26c1 (ENSMUSG00000062432) #7	Exoc6 (ENSMUSG00000053799) #8	Hhex (ENSMUSG00000024986) #9	Kif11 (ENSMUSG00000012443) #10	Ide (ENSMUSG00000056999) #11	Marchf5 (ENSMUSG00000023307) #12	Cpeb3 (ENSMUSG00000039652) #13	Btaf1 (ENSMUSG00000040565) #14	Fgfbp3 (ENSMUSG00000047632) #15	Tnks2 (ENSMUSG00000024811) #16	Ppp1r3c (ENSMUSG00000067279) #17	Hectd2 (ENSMUSG00000041180) #18	Pcgf5 (ENSMUSG00000024805) #19	Ankrd1 (ENSMUSG00000024803) #20	Rpp30 (ENSMUSG00000024800) #21	Htr7 (ENSMUSG00000024798) #22	Kif20b (ENSMUSG00000024795) #23	Pank1 (ENSMUSG00000033610) #24	Slc16a12 (ENSMUSG00000009378) #25	Ifit1 (ENSMUSG00000034459) #26	Ifit1bl2 (ENSMUSG00000067297) #27	Ifit3b (ENSMUSG00000062488) #28	Ifit1bl1 (ENSMUSG00000079339) #29	Ifit3 (ENSMUSG00000074896) #30	Ifit2 (ENSMUSG00000045932) #31	Lipa (ENSMUSG00000024781) #32	Ch25h (ENSMUSG00000050370) #33	Fas (ENSMUSG00000024778) #34	Acta2 (ENSMUSG00000035783) #35	Stambpl1 (ENSMUSG00000024776) #36	Ankrd22 (ENSMUSG00000024774) #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.c.b.b.c.a #30	ENSGT00950000182946.d.w.d #29	ENSGT00950000182946.d.w.c #27	ENSGT00950000182946.c.b.b.d ##26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Steppe mouse	MODERN SPECIES	3313	Exoc6 (ENSMSIG00000000137) #8	Hhex (ENSMSIG00000024056) #9	Kif11 (ENSMSIG00000024012) #10	Ide (ENSMSIG00000023965) #11	Marchf5 (ENSMSIG00000023937) #12	Cpeb3 (ENSMSIG00000023886) #13	Btaf1 (ENSMSIG00000023779) #14	Fgfbp3 (ENSMSIG00000023772) #15	Tnks2 (ENSMSIG00000023604) #16	Ppp1r3c (ENSMSIG00000023597) #17	Hectd2 (ENSMSIG00000023532) #18	ENSMSIG00000023518	Pcgf5 (ENSMSIG00000023434) #19	Ankrd1 (ENSMSIG00000023413) #20	Rpp30 (ENSMSIG00000023385) #21	Htr7 (ENSMSIG00000023360) #22	ENSMSIG00000023356
spretus	MODERN SPECIES	10	Cyp26c1 (MGP_SPRETEiJ_G0023835) #7	Exoc6 (MGP_SPRETEiJ_G0023834) #8	Hhex (MGP_SPRETEiJ_G0023833) #9	Kif11 (MGP_SPRETEiJ_G0023832) #10	Ide (MGP_SPRETEiJ_G0023831) #11	Marchf5 (MGP_SPRETEiJ_G0023830) #12	Cpeb3 (MGP_SPRETEiJ_G0023829) #13	Btaf1 (MGP_SPRETEiJ_G0023828) #14	Fgfbp3 (MGP_SPRETEiJ_G0023827) #15	Tnks2 (MGP_SPRETEiJ_G0023826) #16	Ppp1r3c (MGP_SPRETEiJ_G0023825) #17	Hectd2 (MGP_SPRETEiJ_G0023824) #18	Pcgf5 (MGP_SPRETEiJ_G0023823) #19	Ankrd1 (MGP_SPRETEiJ_G0023822) #20	Rpp30 (MGP_SPRETEiJ_G0023821) #21	Htr7 (MGP_SPRETEiJ_G0023820) #22	Kif20b (MGP_SPRETEiJ_G0023819) #23	Pank1 (MGP_SPRETEiJ_G0023818) #24	Slc16a12 (MGP_SPRETEiJ_G0023817) #25	Ifit1 (MGP_SPRETEiJ_G0023816) #26	MGP_SPRETEiJ_G0023815 #30	MGP_SPRETEiJ_G0023814 #30	Ifit1bl1 (MGP_SPRETEiJ_G0023813) #29	Ifit2 (MGP_SPRETEiJ_G0023812) #31	Lipa (MGP_SPRETEiJ_G0023811) #32	Ch25h (MGP_SPRETEiJ_G0023810) #33	Fas (MGP_SPRETEiJ_G0023809) #34	Acta2 (MGP_SPRETEiJ_G0023808) #35	Stambpl1 (MGP_SPRETEiJ_G0023807) #36	Ankrd22 (MGP_SPRETEiJ_G0023806) #37	Lipm (MGP_SPRETEiJ_G0023805)
Ryukyu mouse	MODERN SPECIES	10	Exoc6 (MGP_CAROLIEiJ_G0022916) #8	Hhex (MGP_CAROLIEiJ_G0022915) #9	MGP_CAROLIEiJ_G0022914	MGP_CAROLIEiJ_G0022913	Ide (MGP_CAROLIEiJ_G0022912) #11	Marchf5 (MGP_CAROLIEiJ_G0022911) #12	Cpeb3 (MGP_CAROLIEiJ_G0022910) #13	Btaf1 (MGP_CAROLIEiJ_G0022909) #14	Fgfbp3 (MGP_CAROLIEiJ_G0022908) #15	Tnks2 (MGP_CAROLIEiJ_G0022907) #16	Ppp1r3c (MGP_CAROLIEiJ_G0022906) #17	Hectd2 (MGP_CAROLIEiJ_G0022905) #18	Pcgf5 (MGP_CAROLIEiJ_G0022904) #19	Ankrd1 (MGP_CAROLIEiJ_G0022903) #20	Rpp30 (MGP_CAROLIEiJ_G0022902) #21	Htr7 (MGP_CAROLIEiJ_G0022901) #22	Kif20b (MGP_CAROLIEiJ_G0022900) #23	Pank1 (MGP_CAROLIEiJ_G0022899) #24	Slc16a12 (MGP_CAROLIEiJ_G0022898) #25	Ifit1 (MGP_CAROLIEiJ_G0022897) #26	MGP_CAROLIEiJ_G0022896 #28	MGP_CAROLIEiJ_G0022895 #28	MGP_CAROLIEiJ_G0022894 #29	MGP_CAROLIEiJ_G0022893 #29	Ifit2 (MGP_CAROLIEiJ_G0022892) #31	Lipa (MGP_CAROLIEiJ_G0022891) #32	Ch25h (MGP_CAROLIEiJ_G0022890) #33	Fas (MGP_CAROLIEiJ_G0022889) #34	Acta2 (MGP_CAROLIEiJ_G0022888) #35	Stambpl1 (MGP_CAROLIEiJ_G0022887) #36	Ankrd22 (MGP_CAROLIEiJ_G0022886) #37
Shrew mouse	MODERN SPECIES		Cyp26a1 (MGP_PahariEiJ_G0014411) ##7	Cyp26c1 (MGP_PahariEiJ_G0014410) #7	Exoc6 (MGP_PahariEiJ_G0014409) #8	Hhex (MGP_PahariEiJ_G0014408) #9	Ide (MGP_PahariEiJ_G0014407) #11	Marchf5 (MGP_PahariEiJ_G0014406) #12	Cpeb3 (MGP_PahariEiJ_G0014405) #13	Btaf1 (MGP_PahariEiJ_G0014404) #14	Fgfbp3 (MGP_PahariEiJ_G0014403) #15	MGP_PahariEiJ_G0014402 #16	Ppp1r3c (MGP_PahariEiJ_G0014401) #17	Hectd2 (MGP_PahariEiJ_G0014400) #18	Pcgf5 (MGP_PahariEiJ_G0014399) #19	Ankrd1 (MGP_PahariEiJ_G0014398) #20	Rpp30 (MGP_PahariEiJ_G0014397) #21	Htr7 (MGP_PahariEiJ_G0014396) #22	Kif20b (MGP_PahariEiJ_G0014395) #23	Pank1 (MGP_PahariEiJ_G0014394) #24	Slc16a12 (MGP_PahariEiJ_G0014393) #25	Ifit1 (MGP_PahariEiJ_G0014392) #26	MGP_PahariEiJ_G0014391 #27	MGP_PahariEiJ_G0014390 #27	MGP_PahariEiJ_G0014389 #28	MGP_PahariEiJ_G0014388 #28	Ifit2 (MGP_PahariEiJ_G0014387) #31	Lipa (MGP_PahariEiJ_G0014386) #32	Ch25h (MGP_PahariEiJ_G0014385) #33	MGP_PahariEiJ_G0014384 #34	Acta2 (MGP_PahariEiJ_G0014383) #35	MGP_PahariEiJ_G0014382 #36	Ankrd22 (MGP_PahariEiJ_G0014381) #37
Rat	MODERN SPECIES		Cyp26c1 (ENSRNOG00000030698) #7	Exoc6 (ENSRNOG00000036601) #8	Hhex (ENSRNOG00000016595) #9	Kif11 (ENSRNOG00000056069) #10	Ide (ENSRNOG00000016833) #11	Marchf5 (ENSRNOG00000017396) #12	Cpeb3 (ENSRNOG00000020689) #13	Btaf1 (ENSRNOG00000017938) #14	Fgfbp3 (ENSRNOG00000022796) #15	Tnks2 (ENSRNOG00000052664) #16	Ppp1r3c (ENSRNOG00000018494) #17	Hectd2 (ENSRNOG00000056753) #18	Pcgf5 (ENSRNOG00000018532) #19	Ankrd1 (ENSRNOG00000018598) #20	Rpp30 (ENSRNOG00000018718) #21	Htr7 (ENSRNOG00000018827) #22	ENSRNOG00000065783	ENSRNOG00000067512	Kif20b (ENSRNOG00000018929) #23	Pank1 (ENSRNOG00000018944) #24	Slc16a12 (ENSRNOG00000021916) #25	Ifit1 (ENSRNOG00000019050) #26	Ifit1bl (ENSRNOG00000036603) #27	Ifit3 (ENSRNOG00000022839) #28	Ifit2 (ENSRNOG00000036604) #31	Lipa (ENSRNOG00000019077) #32	Ch25h (ENSRNOG00000019141) #33	Fas (ENSRNOG00000019142) #34	Acta2 (ENSRNOG00000058039) #35	Stambpl1 (ENSRNOG00000050224) #36	Ankrd22 (ENSRNOG00000019190) #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Golden Hamster	MODERN SPECIES	617	Exoc6 (ENSMAUG00000021958) #8	Hhex (ENSMAUG00000021875) #9	Kif11 (ENSMAUG00000001346) #10	Ide (ENSMAUG00000001331) #11	ENSMAUG00000004621	ENSMAUG00000001811 #12	Cpeb3 (ENSMAUG00000002789) #13	Btaf1 (ENSMAUG00000003977) #14	Fgfbp3 (ENSMAUG00000003881) #15	Tnks2 (ENSMAUG00000002675) #16	Ppp1r3c (ENSMAUG00000021890) #17	Hectd2 (ENSMAUG00000005723) #18	Pcgf5 (ENSMAUG00000006268) #19	Ankrd1 (ENSMAUG00000004256) #20	Rpp30 (ENSMAUG00000008797) #21	Htr7 (ENSMAUG00000008537) #22	Kif20b (ENSMAUG00000003707) #23	Pank1 (ENSMAUG00000004211) #24	Slc16a12 (ENSMAUG00000005932) #25	ENSMAUG00000006010	ENSMAUG00000004543 #27	ENSMAUG00000004294 #28	Ifit2 (ENSMAUG00000004507) #31	Lipa (ENSMAUG00000004120) #32	Ch25h (ENSMAUG00000001529) #33	Fas (ENSMAUG00000008875) #34	Acta2 (ENSMAUG00000007124) #35	ENSMAUG00000004326 #36	Ankrd22 (ENSMAUG00000005961) #37	Lipm (ENSMAUG00000006798)	Lipn (ENSMAUG00000009129)
Chinese hamster chok1gshd	MODERN SPECIES	299	ENSCGRG00001017101	ENSCGRG00001015403	Rnls (ENSCGRG00001012669)	ENSCGRG00001011824	Atad1 (ENSCGRG00001009686)	Papss2 (ENSCGRG00001019072)	Minpp1 (ENSCGRG00001016154)	Fgfbp3 (ENSCGRG00001015712) #15	Tnks2 (ENSCGRG00001008529) #16	ENSCGRG00001013440	Ppp1r3c (ENSCGRG00001019196) #17	Hectd2 (ENSCGRG00001015774) #18	Pcgf5 (ENSCGRG00001010288) #19	Ankrd1 (ENSCGRG00001019357) #20	ENSCGRG00001017068 #21	Htr7 (ENSCGRG00001006968) #22	Kif20b (ENSCGRG00001019586) #23	Pank1 (ENSCGRG00001016193) #24	Slc16a12 (ENSCGRG00001013278) #25	ENSCGRG00001012991	Ifit1 (ENSCGRG00001009709) #26	Ifit2 (ENSCGRG00001008403) #31	ENSCGRG00001012858 #28	ENSCGRG00001018062 #27	Lipa (ENSCGRG00001017679) #32	Ch25h (ENSCGRG00001014081) #33	Fas (ENSCGRG00001014763) #34	Acta2 (ENSCGRG00001010722) #35	Stambpl1 (ENSCGRG00001009749) #36	Ankrd22 (ENSCGRG00001005731) #37	Lipm (ENSCGRG00001001485)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.x #26	ENSGT00950000182946.d.w #27	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Prairie vole	MODERN SPECIES	16	Cyp26c1 (ENSMOCG00000010364) #7	Exoc6 (ENSMOCG00000006423) #8	Hhex (ENSMOCG00000002877) #9	Kif11 (ENSMOCG00000018770) #10	ENSMOCG00000018624	Ide (ENSMOCG00000011855) #11	Marchf5 (ENSMOCG00000004858) #12	Cpeb3 (ENSMOCG00000016486) #13	Btaf1 (ENSMOCG00000011495) #14	Tnks2 (ENSMOCG00000014956) #16	Ppp1r3c (ENSMOCG00000007419) #17	Hectd2 (ENSMOCG00000018042) #18	Pcgf5 (ENSMOCG00000010451) #19	Ankrd1 (ENSMOCG00000006428) #20	Rpp30 (ENSMOCG00000016872) #21	Htr7 (ENSMOCG00000008428) #22	Kif20b (ENSMOCG00000001261) #23	ENSMOCG00000022098	ENSMOCG00000020477 #24	Pank1 (ENSMOCG00000004723) #24	Slc16a12 (ENSMOCG00000002695) #25	ENSMOCG00000004601 #26	ENSMOCG00000021284 #26	ENSMOCG00000011659 #28	Ifit2 (ENSMOCG00000016497) #31	Lipa (ENSMOCG00000018201) #32	Ch25h (ENSMOCG00000010445) #33	Fas (ENSMOCG00000000870) #34	Acta2 (ENSMOCG00000022350) #35	Stambpl1 (ENSMOCG00000003028) #36	Ankrd22 (ENSMOCG00000022828) #37
Northern American deer mouse	MODERN SPECIES		Cyp26a1 (ENSPEMG00000013143) ##7	Cyp26c1 (ENSPEMG00000014293) #7	Exoc6 (ENSPEMG00000017626) #8	Hhex (ENSPEMG00000011602) #9	Kif11 (ENSPEMG00000017786) #10	Ide (ENSPEMG00000018035) #11	Marchf5 (ENSPEMG00000015038) #12	Cpeb3 (ENSPEMG00000008448) #13	Btaf1 (ENSPEMG00000005174) #14	Tnks2 (ENSPEMG00000002166) #16	Ppp1r3c (ENSPEMG00000025122) #17	Hectd2 (ENSPEMG00000008243) #18	Pcgf5 (ENSPEMG00000008664) #19	Ankrd1 (ENSPEMG00000013995) #20	Rpp30 (ENSPEMG00000001948) #21	Htr7 (ENSPEMG00000011829) #22	ENSPEMG00000029363 #26	ENSPEMG00000024463 #26	ENSPEMG00000024487 #26	ENSPEMG00000000359 #26	ENSPEMG00000014943 #27	ENSPEMG00000029751 #28	Ifit2 (ENSPEMG00000008813) #31	Lipa (ENSPEMG00000014276) #32	Ch25h (ENSPEMG00000014530) #33	Fas (ENSPEMG00000000158) #34	Acta2 (ENSPEMG00000000128) #35	Stambpl1 (ENSPEMG00000005840) #36	Ankrd22 (ENSPEMG00000017012) #37	Lipm (ENSPEMG00000020501)	Lipn (ENSPEMG00000018314)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1499	Cyp26a1 (ENSNGAG00000020319) ##7	Cyp26c1 (ENSNGAG00000006454) #7	Exoc6 (ENSNGAG00000001199) #8	ENSNGAG00000017053	Kif11 (ENSNGAG00000018093) #10	Ide (ENSNGAG00000018859) #11	Marchf5 (ENSNGAG00000011481) #12	Cpeb3 (ENSNGAG00000015621) #13	Btaf1 (ENSNGAG00000000366) #14	Tnks2 (ENSNGAG00000018372) #16	Ppp1r3c (ENSNGAG00000014792) #17	Hectd2 (ENSNGAG00000018245) #18	ENSNGAG00000015961 #19	Ankrd1 (ENSNGAG00000012773) #20	ENSNGAG00000012018 #21	Htr7 (ENSNGAG00000010658) #22	ENSNGAG00000000031	Kif20b (ENSNGAG00000014138) #23	ENSNGAG00000013645	Pank1 (ENSNGAG00000003177) #24
Lesser Egyptian jerboa	MODERN SPECIES	50	ENSJJAG00000022605	ENSJJAG00000000311	Kif11 (ENSJJAG00000016860) #10	Ide (ENSJJAG00000019815) #11	ENSJJAG00000023593 #12	Cpeb3 (ENSJJAG00000009135) #13	Btaf1 (ENSJJAG00000016636) #14	ENSJJAG00000010510	Tnks2 (ENSJJAG00000024121) #16	Ppp1r3c (ENSJJAG00000023747) #17	Hectd2 (ENSJJAG00000002659) #18	Pcgf5 (ENSJJAG00000019027) #19	ENSJJAG00000012541	Ankrd1 (ENSJJAG00000005637) #20	Rpp30 (ENSJJAG00000020041) #21	Htr7 (ENSJJAG00000017934) #22	ENSJJAG00000013447	ENSJJAG00000022465	Kif20b (ENSJJAG00000013969) #23	ENSJJAG00000018494	Pank1 (ENSJJAG00000023788) #24	Slc16a12 (ENSJJAG00000013860) #25	ENSJJAG00000024328 #26	Ifit2 (ENSJJAG00000019071) #31	ENSJJAG00000010974	Lipa (ENSJJAG00000014976) #32	Ch25h (ENSJJAG00000013038) #33	ENSJJAG00000012674 #34	Acta2 (ENSJJAG00000012960) #35	ENSJJAG00000010334 #36	Ankrd22 (ENSJJAG00000022505) #37
Kangaroo rat	MODERN SPECIES	505	Cyp26c1 (ENSDORG00000006737) #7	Exoc6 (ENSDORG00000006736) #8	ENSDORG00000028544	Kif11 (ENSDORG00000008541) #10	Ide (ENSDORG00000013205) #11	Marchf5 (ENSDORG00000027150) #12	Cpeb3 (ENSDORG00000028940) #13	Btaf1 (ENSDORG00000000104) #14	Fgfbp3 (ENSDORG00000025665) #15	Tnks2 (ENSDORG00000015121) #16	ENSDORG00000008666 #17	Hectd2 (ENSDORG00000002137) #18	Pcgf5 (ENSDORG00000027987) #19	Ankrd1 (ENSDORG00000015336) #20	Rpp30 (ENSDORG00000015333) #21	Htr7 (ENSDORG00000002925) #22
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.t #26	ENSGT00950000182946.d.s #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153661.b.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b.l
Marmotini	ANCESTRAL SPECIES	16	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.t #26	ENSGT00950000182946.d.s #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153661.b.b	ENSGT00570000079168.b.a	ENSGT00940000160819	ENSGT00390000003133	ENSGT00390000000854.c.b.l
Marmotini_b	ANCESTRAL SPECIES	136	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000160856	ENSGT00390000017405	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22
Arctic ground squirrel	MODERN SPECIES	184	EXOC6 (ENSUPAG00010011855) #8	ENSUPAG00010011848 #9	KIF11 (ENSUPAG00010011823) #10	IDE (ENSUPAG00010011780) #11	MARCHF5 (ENSUPAG00010011762) #12	CPEB3 (ENSUPAG00010011729) #13	BTAF1 (ENSUPAG00010011669) #14	FGFBP3 (ENSUPAG00010011663) #15	TNKS2 (ENSUPAG00010011590) #16	PPP1R3C (ENSUPAG00010011587) #17	HECTD2 (ENSUPAG00010011490) #18	PCGF5 (ENSUPAG00010011353) #19	ENSUPAG00010011348	ANKRD1 (ENSUPAG00010011335) #20	RPP30 (ENSUPAG00010011317) #21	HTR7 (ENSUPAG00010011303) #22
Squirrel	MODERN SPECIES	201	ENSSTOG00000030502	HHEX (ENSSTOG00000006255)	KIF11 (ENSSTOG00000006209) #10	ENSSTOG00000024075	IDE (ENSSTOG00000020385) #11	ENSSTOG00000025613	MARCHF5 (ENSSTOG00000005998) #12	CPEB3 (ENSSTOG00000028061) #13	BTAF1 (ENSSTOG00000008677) #14	TNKS2 (ENSSTOG00000002349) #16	PPP1R3C (ENSSTOG00000025781) #17	HECTD2 (ENSSTOG00000009022) #18	PCGF5 (ENSSTOG00000009179) #19	ANKRD1 (ENSSTOG00000009160) #20	RPP30 (ENSSTOG00000027002) #21	HTR7 (ENSSTOG00000028466) #22	ENSSTOG00000033664	ENSSTOG00000027065	KIF20B (ENSSTOG00000012892) #23	PANK1 (ENSSTOG00000022951) #24	SLC16A12 (ENSSTOG00000009614) #25	IFIT5 (ENSSTOG00000028876) ##26	ENSSTOG00000024733 #26	ENSSTOG00000030296 #26	ENSSTOG00000031302 #26	IFIT3 (ENSSTOG00000013100) #28	IFIT2 (ENSSTOG00000022564) #31	ENSSTOG00000026437 #31	LIPA (ENSSTOG00000023070) #32	CH25H (ENSSTOG00000013092) #33	GPRIN2 (ENSSTOG00000005918)
Alpin marmot	MODERN SPECIES	66	EXOC6 (ENSMMMG00000014609) #8	HHEX (ENSMMMG00000014588)	KIF11 (ENSMMMG00000014562) #10	IDE (ENSMMMG00000012810) #11	ENSMMMG00000012791	MARCHF5 (ENSMMMG00000012751) #12	CPEB3 (ENSMMMG00000012583) #13	BTAF1 (ENSMMMG00000012536) #14	TNKS2 (ENSMMMG00000012490) #16	PPP1R3C (ENSMMMG00000012486) #17	HECTD2 (ENSMMMG00000012452) #18	PCGF5 (ENSMMMG00000012341) #19	ENSMMMG00000012338	ANKRD1 (ENSMMMG00000012324) #20	RPP30 (ENSMMMG00000012309) #21	HTR7 (ENSMMMG00000012295) #22	ENSMMMG00000012292	ENSMMMG00000012290	ENSMMMG00000012283	KIF20B (ENSMMMG00000012202) #23	PANK1 (ENSMMMG00000012185) #24	SLC16A12 (ENSMMMG00000012174) #25	IFIT5 (ENSMMMG00000012170) ##26	IFIT1B (ENSMMMG00000012141) #26	IFIT3 (ENSMMMG00000012138) #28	IFIT2 (ENSMMMG00000012130) #31	ENSMMMG00000012079 #31	LIPA (ENSMMMG00000012074) #32	CH25H (ENSMMMG00000012067) #33	ENSMMMG00000012060	GPRIN2 (ENSMMMG00000012057)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Hystricomorpha_b	ANCESTRAL SPECIES	72	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d.q #26	ENSGT00950000182946.d.r #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Long-tailed chinchilla	MODERN SPECIES	132	CYP26C1 (ENSCLAG00000010270) #7	EXOC6 (ENSCLAG00000008310) #8	HHEX (ENSCLAG00000012119)	KIF11 (ENSCLAG00000013622) #10	IDE (ENSCLAG00000013467) #11	MARCHF5 (ENSCLAG00000013192) #12	CPEB3 (ENSCLAG00000011817) #13	BTAF1 (ENSCLAG00000012888) #14	TNKS2 (ENSCLAG00000013558) #16	ENSCLAG00000010844	PPP1R3C (ENSCLAG00000012433) #17	ENSCLAG00000012695 #18	PCGF5 (ENSCLAG00000013777) #19	ANKRD1 (ENSCLAG00000009887) #20	RPP30 (ENSCLAG00000008595) #21	HTR7 (ENSCLAG00000011360) #22	KIF20B (ENSCLAG00000008733) #23	PANK1 (ENSCLAG00000009547) #24	SLC16A12 (ENSCLAG00000008868) #25	ENSCLAG00000009282 #26	ENSCLAG00000008375 #26	IFIT2 (ENSCLAG00000009587) #31	LIPA (ENSCLAG00000015247) #32	CH25H (ENSCLAG00000011191) #33	FAS (ENSCLAG00000010233) #34	ACTA2 (ENSCLAG00000011268) #35	STAMBPL1 (ENSCLAG00000012073) #36	ANKRD22 (ENSCLAG00000013284) #37	LIPM (ENSCLAG00000009261)	LIPN (ENSCLAG00000012833)	LIPK (ENSCLAG00000009773)
Degu	MODERN SPECIES	87	KIF11 (ENSODEG00000006812) #10	IDE (ENSODEG00000005398) #11	ENSODEG00000005936	MARCHF5 (ENSODEG00000004219) #12	ENSODEG00000004464	CPEB3 (ENSODEG00000004591) #13	ENSODEG00000005031	BTAF1 (ENSODEG00000005172) #14	TNKS2 (ENSODEG00000004816) #16	PPP1R3C (ENSODEG00000006013) #17	HECTD2 (ENSODEG00000004980) #18	ENSODEG00000005047	PCGF5 (ENSODEG00000004787) #19	ANKRD1 (ENSODEG00000005129) #20	ENSODEG00000004530 #21	HTR7 (ENSODEG00000004910) #22	ENSODEG00000019106	KIF20B (ENSODEG00000005304) #23	ENSODEG00000004557	ENSODEG00000019069	PANK1 (ENSODEG00000006515) #24	SLC16A12 (ENSODEG00000006954) #25	ENSODEG00000006311	LIPA (ENSODEG00000005659) #32	ENSODEG00000005184	ACTA2 (ENSODEG00000005541) #35	ENSODEG00000005966 #36	ANKRD22 (ENSODEG00000006197) #37	LIPM (ENSODEG00000004722)	LIPN (ENSODEG00000005009)	LIPK (ENSODEG00000004941)
Guinea pig	MODERN SPECIES	137	ENSCPOG00000014755	SDE2 (ENSCPOG00000014756)	ENSCPOG00000025231	ENSCPOG00000039202	ACBD3 (ENSCPOG00000007184)	LIN9 (ENSCPOG00000015642)	PARP1 (ENSCPOG00000015643)	STUM (ENSCPOG00000031019)	ITPKB (ENSCPOG00000013483)	RD3 (ENSCPOG00000022572)	PPP1R3C (ENSCPOG00000038237) #17	HECTD2 (ENSCPOG00000008922) #18	PCGF5 (ENSCPOG00000013156) #19	ANKRD1 (ENSCPOG00000002565) #20	RPP30 (ENSCPOG00000033174) #21	HTR7 (ENSCPOG00000007482) #22
Naked mole-rat female	MODERN SPECIES	4	KIF11 (ENSHGLG00000014395) #10	IDE (ENSHGLG00000012665) #11	MARCH5 (ENSHGLG00000044946) #12	CPEB3 (ENSHGLG00000014022) #13	BTAF1 (ENSHGLG00000010425) #14	FGFBP3 (ENSHGLG00000046261) #15	TNKS2 (ENSHGLG00000018423) #16	PPP1R3C (ENSHGLG00000045942) #17	ENSHGLG00000033981	HECTD2 (ENSHGLG00000013810) #18	PCGF5 (ENSHGLG00000016348) #19	ENSHGLG00000047830	ENSHGLG00000016315	ENSHGLG00000016279 #20	ENSHGLG00000013072 #21	ENSHGLG00000011172 #22	ENSHGLG00000037303	ENSHGLG00000041517	ENSHGLG00000012239	ENSHGLG00000020968	ENSHGLG00000010782 #23	ENSHGLG00000043314	PANK1 (ENSHGLG00000010521) #24	SLC16A12 (ENSHGLG00000007331) #25	IFIT5 (ENSHGLG00000043608) ##26	ENSHGLG00000012010 #26	ENSHGLG00000011005 #26	IFIT3 (ENSHGLG00000049612) #28	ENSHGLG00000039997	IFIT2 (ENSHGLG00000009880) #31	ENSHGLG00000049191 #32
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000166824.c	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Rabbit	MODERN SPECIES	9	CYP26C1 (ENSOCUG00000000176) #7	EXOC6 (ENSOCUG00000000174) #8	ENSOCUG00000016719 #9	KIF11 (ENSOCUG00000016706) #10	ENSOCUG00000037602	IDE (ENSOCUG00000002827) #11	MARCHF5 (ENSOCUG00000005719) #12	CPEB3 (ENSOCUG00000010454) #13	BTAF1 (ENSOCUG00000010433) #14	TNKS2 (ENSOCUG00000012010) #16	PPP1R3C (ENSOCUG00000015051) #17	HECTD2 (ENSOCUG00000015035) #18	PCGF5 (ENSOCUG00000012993) #19	ANKRD1 (ENSOCUG00000006901) #20	RPP30 (ENSOCUG00000006896) #21	HTR7 (ENSOCUG00000016103) #22	ENSOCUG00000030702	ENSOCUG00000025563	KIF20B (ENSOCUG00000002468) #23	ENSOCUG00000031325	PANK1 (ENSOCUG00000002780) #24	SLC16A12 (ENSOCUG00000014498) #25	ENSOCUG00000005445 #26	IFIT3 (ENSOCUG00000032132) #28	IFIT2 (ENSOCUG00000024939) #31	LIPA (ENSOCUG00000001553) #32	CH25H (ENSOCUG00000000545) #33	ENSOCUG00000008202 #34	ACTA2 (ENSOCUG00000008193) #35	STAMBPL1 (ENSOCUG00000008174) #36	ANKRD22 (ENSOCUG00000004617) #37
Pika	MODERN SPECIES	2097															ENSOPRG00000002071 #20	ENSOPRG00000002036 #22
Tree shrew	MODERN SPECIES	7992														ANKRD1 (ENSTBEG00000010862) #20	RPP30 (ENSTBEG00000010734) #21	HTR7 (ENSTBEG00000010431) #22
Primates	ANCESTRAL SPECIES	16	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p.c.a #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p.d #26	ENSGT00950000182946.d.p.c.a #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Greater bamboo lemur	MODERN SPECIES	406	HHEX (ENSPSMG00000012502)	KIF11 (ENSPSMG00000012572) #10	IDE (ENSPSMG00000012636) #11	MARCHF5 (ENSPSMG00000012654) #12	CPEB3 (ENSPSMG00000012681) #13	BTAF1 (ENSPSMG00000012804) #14	FGFBP3 (ENSPSMG00000012861) #15	TNKS2 (ENSPSMG00000012929) #16	PPP1R3C (ENSPSMG00000012959) #17	HECTD2 (ENSPSMG00000013062) #18	ENSPSMG00000013168	PCGF5 (ENSPSMG00000013196) #19	ENSPSMG00000013209	ANKRD1 (ENSPSMG00000013220) #20	RPP30 (ENSPSMG00000013253) #21	HTR7 (ENSPSMG00000013265) #22
Coquerels sifaka	MODERN SPECIES	787	ENSPCOG00000018518	EXOC6 (ENSPCOG00000024612) #8	HHEX (ENSPCOG00000008674)	KIF11 (ENSPCOG00000018984) #10	IDE (ENSPCOG00000017623) #11	ENSPCOG00000026390	MARCHF5 (ENSPCOG00000022205) #12	CPEB3 (ENSPCOG00000023690) #13	BTAF1 (ENSPCOG00000027269) #14	TNKS2 (ENSPCOG00000024373) #16	PPP1R3C (ENSPCOG00000022561) #17	HECTD2 (ENSPCOG00000020697) #18	PCGF5 (ENSPCOG00000025053) #19	ANKRD1 (ENSPCOG00000024392) #20	RPP30 (ENSPCOG00000017865) #21	HTR7 (ENSPCOG00000022548) #22	KIF20B (ENSPCOG00000011378) #23	PANK1 (ENSPCOG00000025267) #24	SLC16A12 (ENSPCOG00000014212) #25	IFIT5 (ENSPCOG00000016774) ##26	IFIT1 (ENSPCOG00000000411) #26	IFIT3 (ENSPCOG00000000039) #28	IFIT2 (ENSPCOG00000025792) #31	ENSPCOG00000007526	ENSPCOG00000015339	LIPA (ENSPCOG00000015519) #32	ENSPCOG00000013528	FAS (ENSPCOG00000004108) #34	ACTA2 (ENSPCOG00000004723) #35	ENSPCOG00000015760	STAMBPL1 (ENSPCOG00000015340) #36
Mouse lemur	MODERN SPECIES	6	CYP26C1 (ENSMICG00000013120) #7	EXOC6 (ENSMICG00000013082) #8	HHEX (ENSMICG00000034608)	KIF11 (ENSMICG00000046515) #10	IDE (ENSMICG00000012894) #11	MARCHF5 (ENSMICG00000017843) #12	CPEB3 (ENSMICG00000026866) #13	BTAF1 (ENSMICG00000017841) #14	ENSMICG00000043586	TNKS2 (ENSMICG00000014154) #16	PPP1R3C (ENSMICG00000043594) #17	HECTD2 (ENSMICG00000012041) #18	ENSMICG00000012035 #19	ANKRD1 (ENSMICG00000012033) #20	RPP30 (ENSMICG00000012019) #21	HTR7 (ENSMICG00000011996) #22	KIF20B (ENSMICG00000013804) #23	ENSMICG00000030352	PANK1 (ENSMICG00000016832) #24	SLC16A12 (ENSMICG00000016823) #25	IFIT5 (ENSMICG00000047990) ##26	ENSMICG00000032446 #26	ENSMICG00000033126 #26	IFIT3 (ENSMICG00000014624) #28	IFIT2 (ENSMICG00000036288) #31	LIPA (ENSMICG00000034453) #32	ENSMICG00000032183	FAS (ENSMICG00000006549) #34	ACTA2 (ENSMICG00000006543) #35	STAMBPL1 (ENSMICG00000006526) #36	ANKRD22 (ENSMICG00000006521) #37
Bushbaby	MODERN SPECIES	123	EXOC6 (ENSOGAG00000016987) #8	HHEX (ENSOGAG00000015201)	ENSOGAG00000015192 #10	IDE (ENSOGAG00000015180) #11	MARCHF5 (ENSOGAG00000015175) #12	CPEB3 (ENSOGAG00000002002) #13	BTAF1 (ENSOGAG00000001995) #14	FGFBP3 (ENSOGAG00000031866) #15	TNKS2 (ENSOGAG00000001988) #16	PPP1R3C (ENSOGAG00000015739) #17	HECTD2 (ENSOGAG00000006030) #18	PCGF5 (ENSOGAG00000001187) #19	ENSOGAG00000032646	ANKRD1 (ENSOGAG00000013966) #20	RPP30 (ENSOGAG00000013963) #21	HTR7 (ENSOGAG00000013960) #22	ENSOGAG00000026403	ENSOGAG00000030836	KIF20B (ENSOGAG00000008980) #23	ENSOGAG00000015716 #24	SLC16A12 (ENSOGAG00000009661) #25	IFIT5 (ENSOGAG00000009660) ##26	IFIT1 (ENSOGAG00000031058) #26	IFIT3 (ENSOGAG00000002215) #28	IFIT2 (ENSOGAG00000027677) #31	ENSOGAG00000026881	LIPA (ENSOGAG00000002214) #32	CH25H (ENSOGAG00000002213) #33	FAS (ENSOGAG00000006440) #34	ACTA2 (ENSOGAG00000028125) #35	STAMBPL1 (ENSOGAG00000006433) #36
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000161748.c	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000153167.B.j	ENSGT00940000161748.c	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748.d	ENSGT00940000153167.B.j	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Capuchin	MODERN SPECIES	705															ENSCCAG00000022184	HTR7 (ENSCCAG00000018538) #22
Bolivian squirrel monkey	MODERN SPECIES	47	HHEX (ENSSBOG00000029168)	ENSSBOG00000032639	KIF11 (ENSSBOG00000034950) #10	IDE (ENSSBOG00000022039) #11	MARCHF5 (ENSSBOG00000033560) #12	CPEB3 (ENSSBOG00000035843) #13	BTAF1 (ENSSBOG00000023863) #14	ENSSBOG00000026404	ENSSBOG00000014089	TNKS2 (ENSSBOG00000022355) #16	PPP1R3C (ENSSBOG00000020041) #17	HECTD2 (ENSSBOG00000021741) #18	PCGF5 (ENSSBOG00000019845) #19	ANKRD1 (ENSSBOG00000021694) #20	RPP30 (ENSSBOG00000025405) #21	HTR7 (ENSSBOG00000029751) #22	ENSSBOG00000021832	ENSSBOG00000033637	KIF20B (ENSSBOG00000022329) #23	PANK1 (ENSSBOG00000020171) #24	SLC16A12 (ENSSBOG00000031607) #25	IFIT5 (ENSSBOG00000028582) ##26	IFIT1 (ENSSBOG00000033954) #26	IFIT1B (ENSSBOG00000024690) #26	IFIT3 (ENSSBOG00000029768) #28	IFIT2 (ENSSBOG00000035689) #31	LIPA (ENSSBOG00000022968) #32	FAS (ENSSBOG00000033506) #34	ACTA2 (ENSSBOG00000021976) #35	STAMBPL1 (ENSSBOG00000031643) #36	ANKRD22 (ENSSBOG00000028251) #37
Marmoset	MODERN SPECIES	3	ENSCJAG00000008627	KIF11 (ENSCJAG00000008594) #10	IDE (ENSCJAG00000008515) #11	MARCHF5 (ENSCJAG00000008509) #12	ENSCJAG00000075826	CPEB3 (ENSCJAG00000008495) #13	BTAF1 (ENSCJAG00000008359) #14	ENSCJAG00000074077	TNKS2 (ENSCJAG00000008230) #16	PPP1R3C (ENSCJAG00000075367) #17	HECTD2 (ENSCJAG00000010937) #18	ENSCJAG00000070442	PCGF5 (ENSCJAG00000011001) #19	ANKRD1 (ENSCJAG00000011021) #20	RPP30 (ENSCJAG00000011045) #21	HTR7 (ENSCJAG00000011075) #22	ENSCJAG00000085126	KIF20B (ENSCJAG00000011110) #23	PANK1 (ENSCJAG00000011177) #24	SLC16A12 (ENSCJAG00000039416) #25	IFIT5 (ENSCJAG00000011216) ##26	ENSCJAG00000069816	ENSCJAG00000035375	IFIT1 (ENSCJAG00000005746) #26	IFIT3 (ENSCJAG00000005737) #28	LIPA (ENSCJAG00000005689) #32	FAS (ENSCJAG00000005615) #34	ACTA2 (ENSCJAG00000005576) #35	STAMBPL1 (ENSCJAG00000005484) #36	ANKRD22 (ENSCJAG00000052310) #37	LIPM (ENSCJAG00000005454)
Mas night monkey	MODERN SPECIES	1344	HHEX (ENSANAG00000022409)	ENSANAG00000032328	KIF11 (ENSANAG00000032354) #10	IDE (ENSANAG00000031652) #11	ENSANAG00000031609	MARCHF5 (ENSANAG00000030069) #12	CPEB3 (ENSANAG00000037406) #13	ENSANAG00000027568	BTAF1 (ENSANAG00000032672) #14	TNKS2 (ENSANAG00000037727) #16	PPP1R3C (ENSANAG00000034751) #17	HECTD2 (ENSANAG00000023085) #18	PCGF5 (ENSANAG00000032781) #19	ANKRD1 (ENSANAG00000031001) #20	RPP30 (ENSANAG00000009439) #21	HTR7 (ENSANAG00000037604) #22	ENSANAG00000036783	ENSANAG00000019434	ENSANAG00000036622	ENSANAG00000019647	KIF20B (ENSANAG00000024962) #23	PANK1 (ENSANAG00000027836) #24	SLC16A12 (ENSANAG00000035309) #25	IFIT5 (ENSANAG00000038185) ##26	IFIT1 (ENSANAG00000038377) #26	IFIT1B (ENSANAG00000038456) #26	IFIT3 (ENSANAG00000034347) #28	IFIT2 (ENSANAG00000035731) #31	LIPA (ENSANAG00000038450) #32	FAS (ENSANAG00000038158) #34	STAMBPL1 (ENSANAG00000022945) #36
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Rhinopithecus	ANCESTRAL SPECIES	94	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00390000001804.cb.a.a	ENSGT00390000018390.ic.a	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00550000074829.kb	ENSGT00390000003912	ENSGT01030000234564.a.b	ENSGT01050000244894.a.a.a.a	ENSGT00510000048131	ENSGT00390000014743	ENSGT00550000075069	ENSGT00390000016605	ENSGT00390000004322.b.h	ENSGT01100000263562.b.a.a.c.b	ENSGT01100000263478.a.a	ENSGT01100000263478.a.b	ENSGT00390000007786.b	ENSGT00910000146994	ENSGT00910000147870
Golden snub-nosed monkey	MODERN SPECIES	2218																HTR7 (ENSRROG00000030218) #22	ENSRROG00000030184	ENSRROG00000016223	KIF20B (ENSRROG00000045037) #23	PANK1 (ENSRROG00000028254) #24	SLC16A12 (ENSRROG00000029561) #25	IFIT5 (ENSRROG00000034590) ##26
Black snub-nosed monkey	MODERN SPECIES	1276												HECTD2 (ENSRBIG00000044396) #18	PCGF5 (ENSRBIG00000041808) #19	ANKRD1 (ENSRBIG00000022719) #20	RPP30 (ENSRBIG00000036948) #21	HTR7 (ENSRBIG00000017965) #22	ENSRBIG00000042902	ENSRBIG00000032742	ENSRBIG00000024557	KIF20B (ENSRBIG00000004425) #23	PANK1 (ENSRBIG00000038690) #24	SLC16A12 (ENSRBIG00000039340) #25	IFIT5 (ENSRBIG00000000113) ##26	ENSRBIG00000041932 #26
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Vervet Monkey	MODERN SPECIES	28	EXOC6 (ENSCSAG00000006536) #8	HHEX (ENSCSAG00000006543)	KIF11 (ENSCSAG00000006555) #10	IDE (ENSCSAG00000006565) #11	MARCHF5 (ENSCSAG00000006574) #12	CPEB3 (ENSCSAG00000006579) #13	BTAF1 (ENSCSAG00000006589) #14	ENSCSAG00000018442	FGFBP3 (ENSCSAG00000018441) #15	TNKS2 (ENSCSAG00000006602) #16	PPP1R3C (ENSCSAG00000006607) #17	HECTD2 (ENSCSAG00000006666) #18	PCGF5 (ENSCSAG00000006687) #19	ANKRD1 (ENSCSAG00000006691) #20	RPP30 (ENSCSAG00000006694) #21	HTR7 (ENSCSAG00000006705) #22	KIF20B (ENSCSAG00000006740) #23	PANK1 (ENSCSAG00000006763) #24	SLC16A12 (ENSCSAG00000006767) #25	IFIT5 (ENSCSAG00000006768) ##26	IFIT1 (ENSCSAG00000006770) #26	IFIT1B (ENSCSAG00000018440) #26	IFIT3 (ENSCSAG00000006774) #28	IFIT2 (ENSCSAG00000006776) #31	LIPA (ENSCSAG00000006783) #32	CH25H (ENSCSAG00000018439) #33	ACTA2 (ENSCSAG00000006787) #35	STAMBPL1 (ENSCSAG00000006795) #36	ANKRD22 (ENSCSAG00000006799) #37	LIPM (ENSCSAG00000006821)	ENSCSAG00000006847
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750.b #18	ENSGT00940000157750.a.a #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Olive baboon	MODERN SPECIES	2	HHEX (ENSPANG00000021555)	KIF11 (ENSPANG00000021559) #10	IDE (ENSPANG00000021569) #11	MARCHF5 (ENSPANG00000021562) #12	CPEB3 (ENSPANG00000021561) #13	ENSPANG00000030166	BTAF1 (ENSPANG00000021620) #14	FGFBP3 (ENSPANG00000045162) #15	TNKS2 (ENSPANG00000021618) #16	PPP1R3C (ENSPANG00000021656) #17	HECTD2 (ENSPANG00000021659) #18	PCGF5 (ENSPANG00000021696) #19	ANKRD1 (ENSPANG00000021697) #20	RPP30 (ENSPANG00000021710) #21	ENSPANG00000016752	HTR7 (ENSPANG00000021709) #22	KIF20B (ENSPANG00000021707) #23	ENSPANG00000043772	PANK1 (ENSPANG00000021705) #24	SLC16A12 (ENSPANG00000021703) #25	IFIT5 (ENSPANG00000021702) ##26	IFIT1B (ENSPANG00000010650) #26	IFIT3 (ENSPANG00000021698) #28	LIPA (ENSPANG00000021738) #32	CH25H (ENSPANG00000043199) #33	ENSPANG00000046874	STAMBPL1 (ENSPANG00000021744) #36	ENSPANG00000048276	ACTA2 (ENSPANG00000021748) #35	ANKRD22 (ENSPANG00000021742) #37	LIPM (ENSPANG00000021739)
Cercopithecinae_d	ANCESTRAL SPECIES	95	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750.b #18	ENSGT00940000157750.a.a #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Drill	MODERN SPECIES	1454												ENSMLEG00000030390 #18	PCGF5 (ENSMLEG00000037151) #19	ANKRD1 (ENSMLEG00000039391) #20	RPP30 (ENSMLEG00000037578) #21	HTR7 (ENSMLEG00000030712) #22	KIF20B (ENSMLEG00000035041) #23	ENSMLEG00000017756	PANK1 (ENSMLEG00000038680) #24	SLC16A12 (ENSMLEG00000037319) #25	IFIT5 (ENSMLEG00000029293) ##26	IFIT1B (ENSMLEG00000034358) #26	IFIT3 (ENSMLEG00000028099) #28	IFIT2 (ENSMLEG00000039597) #31	LIPA (ENSMLEG00000006699) #32
Sooty mangabey	MODERN SPECIES	115	HHEX (ENSCATG00000042941)	KIF11 (ENSCATG00000040149) #10	IDE (ENSCATG00000039886) #11	ENSCATG00000039239	MARCHF5 (ENSCATG00000013785) #12	CPEB3 (ENSCATG00000038447) #13	ENSCATG00000034470	ENSCATG00000021700	BTAF1 (ENSCATG00000043731) #14	TNKS2 (ENSCATG00000035054) #16	PPP1R3C (ENSCATG00000040666) #17	HECTD2 (ENSCATG00000035693) #18	PCGF5 (ENSCATG00000045174) #19	ANKRD1 (ENSCATG00000031961) #20	RPP30 (ENSCATG00000042072) #21	HTR7 (ENSCATG00000027814) #22	KIF20B (ENSCATG00000036358) #23	ENSCATG00000016477	PANK1 (ENSCATG00000037209) #24	SLC16A12 (ENSCATG00000039042) #25	IFIT5 (ENSCATG00000040377) ##26	IFIT1B (ENSCATG00000044735) #26	IFIT3 (ENSCATG00000022496) #28	LIPA (ENSCATG00000028959) #32	FAS (ENSCATG00000042783) #34	STAMBPL1 (ENSCATG00000043803) #36	ACTA2 (ENSCATG00000037752) #35	ANKRD22 (ENSCATG00000030454) #37	LIPM (ENSCATG00000021790)	LIPN (ENSCATG00000044254)	LIPK (ENSCATG00000036197)
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00910000148753	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Pig-tailed macaque	MODERN SPECIES	104	IDE (ENSMNEG00000033204) #11	MARCHF5 (ENSMNEG00000037845) #12	CPEB3 (ENSMNEG00000045465) #13	ENSMNEG00000030284	ENSMNEG00000033162	BTAF1 (ENSMNEG00000035134) #14	TNKS2 (ENSMNEG00000036136) #16	ENSMNEG00000029218	PPP1R3C (ENSMNEG00000040446) #17	HECTD2 (ENSMNEG00000043171) #18	PCGF5 (ENSMNEG00000041619) #19	ENSMNEG00000031049	ANKRD1 (ENSMNEG00000045466) #20	RPP30 (ENSMNEG00000033838) #21	ENSMNEG00000011783	HTR7 (ENSMNEG00000038453) #22	KIF20B (ENSMNEG00000030266) #23	ENSMNEG00000016798	PANK1 (ENSMNEG00000005927) #24	SLC16A12 (ENSMNEG00000032571) #25	IFIT5 (ENSMNEG00000044200) ##26	IFIT3 (ENSMNEG00000028978) #28	IFIT2 (ENSMNEG00000034947) #31	LIPA (ENSMNEG00000038016) #32	FAS (ENSMNEG00000028110) #34	STAMBPL1 (ENSMNEG00000036426) #36	ACTA2 (ENSMNEG00000031257) #35	ANKRD22 (ENSMNEG00000039914) #37	LIPM (ENSMNEG00000035058)	LIPN (ENSMNEG00000034373)	LIPK (ENSMNEG00000034597)
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Crab-eating macaque	MODERN SPECIES	19	CYP26C1 (ENSMFAG00000059589) #7	EXOC6 (ENSMFAG00000000962) #8	ENSMFAG00000055118	KIF11 (ENSMFAG00000036607) #10	IDE (ENSMFAG00000001464) #11	MARCHF5 (ENSMFAG00000041550) #12	CPEB3 (ENSMFAG00000025613) #13	BTAF1 (ENSMFAG00000044979) #14	TNKS2 (ENSMFAG00000001030) #16	PPP1R3C (ENSMFAG00000000348) #17	HECTD2 (ENSMFAG00000012546) #18	PCGF5 (ENSMFAG00000036587) #19	ANKRD1 (ENSMFAG00000003868) #20	RPP30 (ENSMFAG00000031109) #21	ENSMFAG00000056487	HTR7 (ENSMFAG00000001114) #22	KIF20B (ENSMFAG00000039355) #23	PANK1 (ENSMFAG00000032016) #24	SLC16A12 (ENSMFAG00000002755) #25	IFIT5 (ENSMFAG00000040940) ##26	IFIT2 (ENSMFAG00000044215) #31	IFIT3 (ENSMFAG00000045508) #28	LIPA (ENSMFAG00000035936) #32	CH25H (ENSMFAG00000058457) #33	ENSMFAG00000049084	ENSMFAG00000062703	ACTA2 (ENSMFAG00000000205) #35	STAMBPL1 (ENSMFAG00000033260) #36	ANKRD22 (ENSMFAG00000042098) #37	LIPM (ENSMFAG00000001039)	LIPN (ENSMFAG00000044901)
Rhesus	MODERN SPECIES	19	HHEX (ENSMMUG00000011789)	KIF11 (ENSMMUG00000023266) #10	IDE (ENSMMUG00000023267) #11	ENSMMUG00000052185	MARCHF5 (ENSMMUG00000004816) #12	CPEB3 (ENSMMUG00000015050) #13	BTAF1 (ENSMMUG00000017627) #14	FGFBP3 (ENSMMUG00000059608) #15	TNKS2 (ENSMMUG00000007478) #16	PPP1R3C (ENSMMUG00000000242) #17	HECTD2 (ENSMMUG00000000238) #18	ENSMMUG00000050611	PCGF5 (ENSMMUG00000038018) #19	ANKRD1 (ENSMMUG00000006632) #20	RPP30 (ENSMMUG00000006628) #21	HTR7 (ENSMMUG00000059038) #22	ENSMMUG00000063840	ENSMMUG00000052467	KIF20B (ENSMMUG00000013485) #23	PANK1 (ENSMMUG00000010780) #24	SLC16A12 (ENSMMUG00000017535) #25	ENSMMUG00000056491	IFIT5 (ENSMMUG00000017534) ##26	IFIT1 (ENSMMUG00000017533) #26	IFIT3 (ENSMMUG00000005001) #28	ENSMMUG00000058942	IFIT2 (ENSMMUG00000061761) #31	LIPA (ENSMMUG00000056618) #32	CH25H (ENSMMUG00000055047) #33	ACTA2 (ENSMMUG00000009341) #35	STAMBPL1 (ENSMMUG00000009339) #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00680000100037.g.a.b.b	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Gibbon	MODERN SPECIES	18	EXOC6 (ENSNLEG00000012713) #8	ENSNLEG00000012707	KIF11 (ENSNLEG00000012674) #10	IDE (ENSNLEG00000012631) #11	MARCHF5 (ENSNLEG00000012617) #12	CPEB3 (ENSNLEG00000012600) #13	ENSNLEG00000035780	BTAF1 (ENSNLEG00000012513) #14	TNKS2 (ENSNLEG00000012457) #16	PPP1R3C (ENSNLEG00000012453) #17	HECTD2 (ENSNLEG00000012415) #18	PCGF5 (ENSNLEG00000033917) #19	ENSNLEG00000034294	ANKRD1 (ENSNLEG00000012395) #20	RPP30 (ENSNLEG00000012383) #21	ENSNLEG00000012379 #22	ENSNLEG00000035960	KIF20B (ENSNLEG00000012326) #23	ENSNLEG00000012314 #24	SLC16A12 (ENSNLEG00000012310) #25	IFIT5 (ENSNLEG00000033953) ##26	LIPA (ENSNLEG00000031920) #32	IFIT1 (ENSNLEG00000012308) #26	IFIT1B (ENSNLEG00000018636) #26	IFIT2 (ENSNLEG00000018635) #31	CH25H (ENSNLEG00000018634) #33	FAS (ENSNLEG00000012260) #34	ACTA2 (ENSNLEG00000012233) #35	STAMBPL1 (ENSNLEG00000012216) #36	ANKRD22 (ENSNLEG00000012212) #37	LIPM (ENSNLEG00000012208)
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Orangutan	MODERN SPECIES	1	HHEX (ENSPPYG00000002486)	ENSPPYG00000033680	KIF11 (ENSPPYG00000002484) #10	IDE (ENSPPYG00000002483) #11	MARCHF5 (ENSPPYG00000034208) #12	CPEB3 (ENSPPYG00000002481) #13	BTAF1 (ENSPPYG00000002480) #14	FGFBP3 (ENSPPYG00000002479) #15	TNKS2 (ENSPPYG00000036430) #16	PPP1R3C (ENSPPYG00000002478) #17	HECTD2 (ENSPPYG00000002477) #18	ENSPPYG00000002476	PCGF5 (ENSPPYG00000002475) #19	ANKRD1 (ENSPPYG00000002474) #20	RPP30 (ENSPPYG00000002473) #21	HTR7 (ENSPPYG00000002472) #22	ENSPPYG00000041425	KIF20B (ENSPPYG00000002471) #23	PANK1 (ENSPPYG00000002469) #24	SLC16A12 (ENSPPYG00000002468) #25	IFIT5 (ENSPPYG00000041118) ##26	IFIT1 (ENSPPYG00000002466) #26	IFIT1B (ENSPPYG00000002465) #26	IFIT3 (ENSPPYG00000002464) #28	IFIT2 (ENSPPYG00000002463) #31	LIPA (ENSPPYG00000002462) #32	CH25H (ENSPPYG00000002461) #33	FAS (ENSPPYG00000002460) #34	ACTA2 (ENSPPYG00000002459) #35	STAMBPL1 (ENSPPYG00000002457) #36	ANKRD22 (ENSPPYG00000002456) #37
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Pan	ANCESTRAL SPECIES	16	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00910000147522	ENSGT00390000009948.c #12	ENSGT00390000000566.r	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a.e #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.p #26	ENSGT00950000182946.d.o #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Bonobo	MODERN SPECIES	1	KIF11 (ENSPPAG00000043128) #10	IDE (ENSPPAG00000044069) #11	ENSPPAG00000043024	MARCHF5 (ENSPPAG00000042800) #12	ENSPPAG00000028771	ENSPPAG00000027329	CPEB3 (ENSPPAG00000031528) #13	BTAF1 (ENSPPAG00000043906) #14	ENSPPAG00000036014 #15	TNKS2 (ENSPPAG00000040339) #16	PPP1R3C (ENSPPAG00000041638) #17	HECTD2 (ENSPPAG00000030085) #18	PCGF5 (ENSPPAG00000037314) #19	ANKRD1 (ENSPPAG00000035386) #20	RPP30 (ENSPPAG00000043779) #21	HTR7 (ENSPPAG00000039449) #22	KIF20B (ENSPPAG00000031329) #23	ENSPPAG00000041708 #24	SLC16A12 (ENSPPAG00000037557) #25	IFIT5 (ENSPPAG00000004000) ##26	IFIT1 (ENSPPAG00000026116) #26	IFIT1B (ENSPPAG00000011581) #26	IFIT3 (ENSPPAG00000031450) #28	IFIT2 (ENSPPAG00000027962) #31	LIPA (ENSPPAG00000037322) #32	CH25H (ENSPPAG00000024010) #33	FAS (ENSPPAG00000035792) #34	ACTA2 (ENSPPAG00000041922) #35	STAMBPL1 (ENSPPAG00000025072) #36	ANKRD22 (ENSPPAG00000027395) #37	LIPM (ENSPPAG00000040687)
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000042999	KIF11 (ENSPTRG00000002758) #10	IDE (ENSPTRG00000002757) #11	ENSPTRG00000049256	MARCHF5 (ENSPTRG00000024274) #12	ENSPTRG00000042284	CPEB3 (ENSPTRG00000002753) #13	BTAF1 (ENSPTRG00000002751) #14	FGFBP3 (ENSPTRG00000002750) #15	TNKS2 (ENSPTRG00000002749) #16	PPP1R3C (ENSPTRG00000041574) #17	HECTD2 (ENSPTRG00000002747) #18	PCGF5 (ENSPTRG00000023952) #19	ANKRD1 (ENSPTRG00000002743) #20	RPP30 (ENSPTRG00000002742) #21	HTR7 (ENSPTRG00000002741) #22	KIF20B (ENSPTRG00000022813) #23	PANK1 (ENSPTRG00000002738) #24	SLC16A12 (ENSPTRG00000002737) #25	IFIT5 (ENSPTRG00000002736) ##26	IFIT1 (ENSPTRG00000042784) #26	IFIT1B (ENSPTRG00000029833) #26	IFIT3 (ENSPTRG00000029834) #28	IFIT2 (ENSPTRG00000002733) #31	LIPA (ENSPTRG00000002732) #32	CH25H (ENSPTRG00000002731) #33	FAS (ENSPTRG00000002730) #34	ACTA2 (ENSPTRG00000048353) #35	STAMBPL1 (ENSPTRG00000002727) #36	ANKRD22 (ENSPTRG00000002726) #37	LIPM (ENSPTRG00000002725)
Human	MODERN SPECIES	1	CYP26C1 (ENSG00000187553) #7	EXOC6 (ENSG00000138190) #8	HHEX (ENSG00000152804)	KIF11 (ENSG00000138160) #10	IDE (ENSG00000119912) #11	MARCHF5 (ENSG00000198060) #12	CPEB3 (ENSG00000107864) #13	BTAF1 (ENSG00000095564) #14	FGFBP3 (ENSG00000174721) #15	TNKS2 (ENSG00000107854) #16	PPP1R3C (ENSG00000119938) #17	HECTD2 (ENSG00000165338) #18	PCGF5 (ENSG00000180628) #19	ANKRD1 (ENSG00000148677) #20	RPP30 (ENSG00000148688) #21	HTR7 (ENSG00000148680) #22	KIF20B (ENSG00000138182) #23	PANK1 (ENSG00000152782) #24	SLC16A12 (ENSG00000152779) #25	IFIT5 (ENSG00000152778) ##26	IFIT1 (ENSG00000185745) #26	IFIT1B (ENSG00000204010) #26	IFIT3 (ENSG00000119917) #28	IFIT2 (ENSG00000119922) #31	LIPA (ENSG00000107798) #32	CH25H (ENSG00000138135) #33	FAS (ENSG00000026103) #34	ACTA2 (ENSG00000107796) #35	STAMBPL1 (ENSG00000138134) #36	ANKRD22 (ENSG00000152766) #37	LIPM (ENSG00000173239)
Gorilla	MODERN SPECIES	1	ENSGGOG00000024168	ENSGGOG00000039016	KIF11 (ENSGGOG00000011847) #10	IDE (ENSGGOG00000010776) #11	ENSGGOG00000036985	MARCHF5 (ENSGGOG00000009767) #12	ENSGGOG00000039357	CPEB3 (ENSGGOG00000016441) #13	BTAF1 (ENSGGOG00000007216) #14	TNKS2 (ENSGGOG00000009781) #16	PPP1R3C (ENSGGOG00000008830) #17	HECTD2 (ENSGGOG00000010273) #18	PCGF5 (ENSGGOG00000042231) #19	ANKRD1 (ENSGGOG00000008160) #20	RPP30 (ENSGGOG00000026917) #21	HTR7 (ENSGGOG00000016305) #22	KIF20B (ENSGGOG00000000635) #23	ENSGGOG00000001160 #24	SLC16A12 (ENSGGOG00000003986) #25	IFIT5 (ENSGGOG00000003981) ##26	IFIT1 (ENSGGOG00000023234) #26	IFIT1B (ENSGGOG00000023376) #26	IFIT3 (ENSGGOG00000012012) #28	IFIT2 (ENSGGOG00000010407) #31	LIPA (ENSGGOG00000003979) #32	CH25H (ENSGGOG00000024451) #33	FAS (ENSGGOG00000025975) #34	ACTA2 (ENSGGOG00000013421) #35	STAMBPL1 (ENSGGOG00000026429) #36	ANKRD22 (ENSGGOG00000040380) #37	LIPM (ENSGGOG00000007315)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Pan	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.f #22
Bonobo	MODERN SPECIES	3	BORCS5 (ENSPPAG00000031668)	ENSPPAG00000042523	DUSP16 (ENSPPAG00000034313)	ENSPPAG00000026761	ENSPPAG00000039536	GPR19 (ENSPPAG00000019455)	CDKN1B (ENSPPAG00000029743)	APOLD1 (ENSPPAG00000016129)	DDX47 (ENSPPAG00000039793)	ENSPPAG00000041632	ENSPPAG00000041954	ENSPPAG00000019107	GPRC5A (ENSPPAG00000030927)	GPRC5D (ENSPPAG00000036660)	HEBP1 (ENSPPAG00000040043)	ENSPPAG00000042219 #22	FAM234B (ENSPPAG00000042392)	GSG1 (ENSPPAG00000039917)	EMP1 (ENSPPAG00000030276)	GRIN2B (ENSPPAG00000026726)	ATF7IP (ENSPPAG00000035291)	PLBD1 (ENSPPAG00000031093)	GUCY2C (ENSPPAG00000024389)	ENSPPAG00000015575	H2AJ (ENSPPAG00000024162)	WBP11 (ENSPPAG00000040748)	SMCO3 (ENSPPAG00000026259)	ART4 (ENSPPAG00000031731)	MGP (ENSPPAG00000042944)	ERP27 (ENSPPAG00000038568)	ARHGDIB (ENSPPAG00000037213)
Tarsier	MODERN SPECIES	4606											PPP1R3C (ENSTSYG00000014067) #17	HECTD2 (ENSTSYG00000009145) #18	PCGF5 (ENSTSYG00000003037) #19	ANKRD1 (ENSTSYG00000000542) #20	RPP30 (ENSTSYG00000013903) #21	HTR7 (ENSTSYG00000003901) #22
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Suina	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Pig	MODERN SPECIES	5	HHEX (ENSSSCG00000036314)	KIF11 (ENSSSCG00000010471) #10	IDE (ENSSSCG00000010470) #11	MARCHF5 (ENSSSCG00000039887) #12	CPEB3 (ENSSSCG00000010468) #13	BTAF1 (ENSSSCG00000010467) #14	FGFBP3 (ENSSSCG00000010466) #15	ENSSSCG00000031691	TNKS2 (ENSSSCG00000010465) #16	PPP1R3C (ENSSSCG00000010464) #17	HECTD2 (ENSSSCG00000020912) #18	ENSSSCG00000035635	ENSSSCG00000036083 #19	ANKRD1 (ENSSSCG00000010461) #20	RPP30 (ENSSSCG00000010460) #21	HTR7 (ENSSSCG00000010459) #22	ENSSSCG00000045077	KIF20B (ENSSSCG00000010457) #23	PANK1 (ENSSSCG00000010456) #24	SLC16A12 (ENSSSCG00000010455) #25	IFIT5 (ENSSSCG00000010454) ##26	IFIT1 (ENSSSCG00000010452) #26	ENSSSCG00000050592	IFIT3 (ENSSSCG00000061268) #28	IFIT2 (ENSSSCG00000010451) #31	LIPA (ENSSSCG00000010450) #32	CH25H (ENSSSCG00000010449) #33	ENSSSCG00000041185	FAS (ENSSSCG00000010448) #34	ACTA2 (ENSSSCG00000010447) #35	STAMBPL1 (ENSSSCG00000010446) #36
Chacoan peccary	MODERN SPECIES	199	ENSCWAG00000004341	HHEX (ENSCWAG00000004396)	KIF11 (ENSCWAG00000004437) #10	IDE (ENSCWAG00000004471) #11	MARCHF5 (ENSCWAG00000004568) #12	CPEB3 (ENSCWAG00000004608) #13	BTAF1 (ENSCWAG00000004722) #14	FGFBP3 (ENSCWAG00000004902) #15	TNKS2 (ENSCWAG00000004919) #16	PPP1R3C (ENSCWAG00000005006) #17	HECTD2 (ENSCWAG00000005037) #18	ENSCWAG00000005131	PCGF5 (ENSCWAG00000005162) #19	ANKRD1 (ENSCWAG00000005259) #20	RPP30 (ENSCWAG00000008008) #21	HTR7 (ENSCWAG00000008075) #22	KIF20B (ENSCWAG00000008159) #23	ENSCWAG00000008224	PANK1 (ENSCWAG00000008284) #24	SLC16A12 (ENSCWAG00000008589) #25	IFIT5 (ENSCWAG00000008673) ##26	IFIT1 (ENSCWAG00000008707) #26	IFIT3 (ENSCWAG00000008761) #28	IFIT2 (ENSCWAG00000008808) #31	LIPA (ENSCWAG00000008833) #32	CH25H (ENSCWAG00000008878) #33	FAS (ENSCWAG00000008900) #34	STAMBPL1 (ENSCWAG00000008940) #36	ACTA2 (ENSCWAG00000009181) #35	ANKRD22 (ENSCWAG00000009235) #37	LIPM (ENSCWAG00000009317)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Camelidae	ANCESTRAL SPECIES	4	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Arabian camel	MODERN SPECIES	2	HHEX (ENSCDRG00005015775)	KIF11 (ENSCDRG00005015805) #10	IDE (ENSCDRG00005015873) #11	MARCHF5 (ENSCDRG00005016050) #12	CPEB3 (ENSCDRG00005016108) #13	BTAF1 (ENSCDRG00005016182) #14	FGFBP3 (ENSCDRG00005016458) #15	TNKS2 (ENSCDRG00005016655) #16	PPP1R3C (ENSCDRG00005019219) #17	ENSCDRG00005019242 #18	ENSCDRG00005019264 #18	PCGF5 (ENSCDRG00005019307) #19	ENSCDRG00005019353	ANKRD1 (ENSCDRG00005019372) #20	RPP30 (ENSCDRG00005019395) #21	HTR7 (ENSCDRG00005019416) #22	KIF20B (ENSCDRG00005019451) #23	ENSCDRG00005019479 #24	ENSCDRG00005019495 #24	SLC16A12 (ENSCDRG00005006630) #25	IFIT5 (ENSCDRG00005006693) ##26	IFIT1 (ENSCDRG00005006735) #26	IFIT3 (ENSCDRG00005006755) #28	IFIT2 (ENSCDRG00005006766) #31	LIPA (ENSCDRG00005006808) #32	CH25H (ENSCDRG00005006925) #33	FAS (ENSCDRG00005006938) #34	STAMBPL1 (ENSCDRG00005006996) #36	ACTA2 (ENSCDRG00005007102) #35	ANKRD22 (ENSCDRG00005007227) #37	LIPM (ENSCDRG00005007263)
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Cetacea	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066	ENSGT00390000016052
Beluga whale	MODERN SPECIES	65	CYP26A1 (ENSDLEG00000021625) ##7	EXOC6 (ENSDLEG00000021629) #8	HHEX (ENSDLEG00000021649)	KIF11 (ENSDLEG00000021651) #10	IDE (ENSDLEG00000021661) #11	MARCH5 (ENSDLEG00000021669) #12	CPEB3 (ENSDLEG00000021679) #13	BTAF1 (ENSDLEG00000021723) #14	FGFBP3 (ENSDLEG00000021759) #15	TNKS2 (ENSDLEG00000021762) #16	PPP1R3C (ENSDLEG00000021766) #17	ENSDLEG00000021769 #18	PCGF5 (ENSDLEG00000021786) #19	ANKRD1 (ENSDLEG00000021795) #20	RPP30 (ENSDLEG00000021799) #21	HTR7 (ENSDLEG00000021800) #22	KIF20B (ENSDLEG00000021804) #23	PANK1 (ENSDLEG00000021806) #24	SLC16A12 (ENSDLEG00000021813) #25	IFIT5 (ENSDLEG00000021815) ##26	LIPA (ENSDLEG00000021819) #32	CH25H (ENSDLEG00000021823) #33	FAS (ENSDLEG00000021827) #34	ACTA2 (ENSDLEG00000021829) #35	STAMBPL1 (ENSDLEG00000021830) #36	ANKRD22 (ENSDLEG00000021832) #37	LIPM (ENSDLEG00000007943)	LIPN (ENSDLEG00000007954)	LIPK (ENSDLEG00000007972)	LIPF (ENSDLEG00000007994)	ENSDLEG00000008034
Narwhal	MODERN SPECIES	311	CYP26C1 (ENSMMNG00015014755) #7	EXOC6 (ENSMMNG00015014660) #8	HHEX (ENSMMNG00015014611)	KIF11 (ENSMMNG00015014591) #10	IDE (ENSMMNG00015014543) #11	MARCHF5 (ENSMMNG00015014501) #12	CPEB3 (ENSMMNG00015014489) #13	BTAF1 (ENSMMNG00015014407) #14	FGFBP3 (ENSMMNG00015014375) #15	TNKS2 (ENSMMNG00015014252) #16	PPP1R3C (ENSMMNG00015014217) #17	ENSMMNG00015014186 #18	PCGF5 (ENSMMNG00015014168) #19	ANKRD1 (ENSMMNG00015014157) #20	RPP30 (ENSMMNG00015014149) #21	HTR7 (ENSMMNG00015014134) #22	KIF20B (ENSMMNG00015014086) #23	PANK1 (ENSMMNG00015014031) #24	SLC16A12 (ENSMMNG00015014005) #25	IFIT5 (ENSMMNG00015013989) ##26	LIPA (ENSMMNG00015013970) #32	CH25H (ENSMMNG00015013959) #33	FAS (ENSMMNG00015013934) #34	ACTA2 (ENSMMNG00015013862) #35	STAMBPL1 (ENSMMNG00015013850) #36	ANKRD22 (ENSMMNG00015013839) #37	LIPM (ENSMMNG00015013823)	LIPN (ENSMMNG00015013810)	LIPK (ENSMMNG00015013791)	LIPF (ENSMMNG00015013755)	RNLS (ENSMMNG00015013738)
Vaquita	MODERN SPECIES	7	IDE (ENSPSNG00000011347) #11	ENSPSNG00000011256	ENSPSNG00000011227	ENSPSNG00000011178	ENSPSNG00000011142	MARCHF5 (ENSPSNG00000011092) #12	CPEB3 (ENSPSNG00000010887) #13	BTAF1 (ENSPSNG00000010780) #14	FGFBP3 (ENSPSNG00000010751) #15	TNKS2 (ENSPSNG00000010639) #16	PPP1R3C (ENSPSNG00000010577) #17	HECTD2 (ENSPSNG00000010485) #18	PCGF5 (ENSPSNG00000010438) #19	ANKRD1 (ENSPSNG00000010391) #20	RPP30 (ENSPSNG00000010340) #21	HTR7 (ENSPSNG00000010211) #22	KIF20B (ENSPSNG00000010121) #23	PANK1 (ENSPSNG00000009918) #24	SLC16A12 (ENSPSNG00000009808) #25	IFIT5 (ENSPSNG00000009619) ##26	IFIT1 (ENSPSNG00000020823) #26	LIPA (ENSPSNG00000020759) #32	CH25H (ENSPSNG00000020727) #33	FAS (ENSPSNG00000020648) #34	ACTA2 (ENSPSNG00000020576) #35	STAMBPL1 (ENSPSNG00000020503) #36	ANKRD22 (ENSPSNG00000020462) #37	LIPM (ENSPSNG00000020410)	LIPN (ENSPSNG00000020364)	LIPK (ENSPSNG00000020318)	RNLS (ENSPSNG00000020289)
Dolphin	MODERN SPECIES	982														ANKRD1 (ENSTTRG00000014709) #20	RPP30 (ENSTTRG00000014708) #21	HTR7 (ENSTTRG00000014706) #22
Sperm whale	MODERN SPECIES	12	HHEX (ENSPCTG00005021764)	KIF11 (ENSPCTG00005021743) #10	ENSPCTG00005021723	IDE (ENSPCTG00005021667) #11	ENSPCTG00005021640	MARCH5 (ENSPCTG00005021621) #12	CPEB3 (ENSPCTG00005021568) #13	BTAF1 (ENSPCTG00005021292) #14	FGFBP3 (ENSPCTG00005021257) #15	TNKS2 (ENSPCTG00005021153) #16	PPP1R3C (ENSPCTG00005021115) #17	HECTD2 (ENSPCTG00005021069) #18	PCGF5 (ENSPCTG00005021034) #19	ANKRD1 (ENSPCTG00005021000) #20	RPP30 (ENSPCTG00005020952) #21	HTR7 (ENSPCTG00005020889) #22	KIF20B (ENSPCTG00005020786) #23	PANK1 (ENSPCTG00005020702) #24	SLC16A12 (ENSPCTG00005020592) #25	IFIT5 (ENSPCTG00005020572) ##26	IFIT1 (ENSPCTG00005020556) #26	LIPA (ENSPCTG00005020484) #32	CH25H (ENSPCTG00005020465) #33	FAS (ENSPCTG00005020359) #34	ACTA2 (ENSPCTG00005020294) #35	STAMBPL1 (ENSPCTG00005020236) #36	ANKRD22 (ENSPCTG00005020200) #37	LIPM (ENSPCTG00005020133)	LIPN (ENSPCTG00005020102)	LIPF (ENSPCTG00005019974)	ENSPCTG00005019926
Blue whale	MODERN SPECIES	7	CYP26C1 (ENSBMSG00010022056) #7	EXOC6 (ENSBMSG00010022075) #8	HHEX (ENSBMSG00010022091)	KIF11 (ENSBMSG00010022092) #10	IDE (ENSBMSG00010022094) #11	MARCHF5 (ENSBMSG00010022096) #12	CPEB3 (ENSBMSG00010022099) #13	BTAF1 (ENSBMSG00010022106) #14	FGFBP3 (ENSBMSG00010022112) #15	TNKS2 (ENSBMSG00010022115) #16	PPP1R3C (ENSBMSG00010022118) #17	HECTD2 (ENSBMSG00010022121) #18	PCGF5 (ENSBMSG00010022123) #19	ANKRD1 (ENSBMSG00010022126) #20	ENSBMSG00010022128 #21	HTR7 (ENSBMSG00010022131) #22	KIF20B (ENSBMSG00010022136) #23	PANK1 (ENSBMSG00010022142) #24	SLC16A12 (ENSBMSG00010022151) #25	IFIT5 (ENSBMSG00010022155) ##26	IFIT1 (ENSBMSG00010022157) #26	LIPA (ENSBMSG00010022162) #32	CH25H (ENSBMSG00010022165) #33	FAS (ENSBMSG00010022172) #34	ACTA2 (ENSBMSG00010022175) #35	STAMBPL1 (ENSBMSG00010022177) #36	ANKRD22 (ENSBMSG00010022180) #37	LIPM (ENSBMSG00010022182)	LIPN (ENSBMSG00010022184)	LIPK (ENSBMSG00010022187)	LIPF (ENSBMSG00010022190)
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Percora_a	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031	ENSGT00940000161066
Bovidae	ANCESTRAL SPECIES	24	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Caprinae	ANCESTRAL SPECIES	19	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Goat	MODERN SPECIES	18	HHEX (ENSCHIG00000006086)	KIF11 (ENSCHIG00000018268) #10	IDE (ENSCHIG00000016617) #11	MARCHF5 (ENSCHIG00000020959) #12	CPEB3 (ENSCHIG00000017337) #13	BTAF1 (ENSCHIG00000007545) #14	FGFBP3 (ENSCHIG00000015157) #15	TNKS2 (ENSCHIG00000021316) #16	PPP1R3C (ENSCHIG00000023028) #17	HECTD2 (ENSCHIG00000017583) #18	PCGF5 (ENSCHIG00000020514) #19	ENSCHIG00000011467	ANKRD1 (ENSCHIG00000018645) #20	ENSCHIG00000009829	RPP30 (ENSCHIG00000012901) #21	HTR7 (ENSCHIG00000018265) #22	ENSCHIG00000024269	KIF20B (ENSCHIG00000012350) #23	PANK1 (ENSCHIG00000017163) #24	SLC16A12 (ENSCHIG00000007599) #25	IFIT5 (ENSCHIG00000005737) ##26	IFIT1 (ENSCHIG00000021671) #26	IFIT3 (ENSCHIG00000014238) #28	IFIT2 (ENSCHIG00000017063) #31	LIPA (ENSCHIG00000020254) #32	CH25H (ENSCHIG00000004030) #33	FAS (ENSCHIG00000013251) #34	ACTA2 (ENSCHIG00000017779) #35	STAMBPL1 (ENSCHIG00000011285) #36	ANKRD22 (ENSCHIG00000007037) #37	LIPM (ENSCHIG00000020369)
Rambouillet Sheep	MODERN SPECIES	14	EXOC6 (ENSOARG00020014320) #8	HHEX (ENSOARG00020014229)	KIF11 (ENSOARG00020013982) #10	IDE (ENSOARG00020013259) #11	MARCHF5 (ENSOARG00020013178) #12	CPEB3 (ENSOARG00020012975) #13	BTAF1 (ENSOARG00020011767) #14	FGFBP3 (ENSOARG00020011708) #15	TNKS2 (ENSOARG00020011293) #16	PPP1R3C (ENSOARG00020011237) #17	HECTD2 (ENSOARG00020010414) #18	ENSOARG00020010346	PCGF5 (ENSOARG00020010217) #19	ANKRD1 (ENSOARG00020010048) #20	RPP30 (ENSOARG00020009954) #21	HTR7 (ENSOARG00020009867) #22	KIF20B (ENSOARG00020009389) #23	PANK1 (ENSOARG00020009031) #24	SLC16A12 (ENSOARG00020008925) #25	IFIT5 (ENSOARG00020008889) ##26	IFIT3 (ENSOARG00020008812) #28	IFIT2 (ENSOARG00020008771) #31	LIPA (ENSOARG00020008655) #32	CH25H (ENSOARG00020008637) #33	FAS (ENSOARG00020008595) #34	ACTA2 (ENSOARG00020008488) #35	STAMBPL1 (ENSOARG00020008275) #36	ANKRD22 (ENSOARG00020008170) #37	LIPM (ENSOARG00020008055)	LIPN (ENSOARG00020007970)	LIPK (ENSOARG00020007908)
Bovinae	ANCESTRAL SPECIES	22	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Bos	ANCESTRAL SPECIES	23	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000178439	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Bos_a	ANCESTRAL SPECIES	17	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000178439	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37
Wild yak	MODERN SPECIES	802														ANKRD1 (ENSBMUG00000021834) #20	RPP30 (ENSBMUG00000021823) #21	HTR7 (ENSBMUG00000021808) #22	ENSBMUG00000021795	ENSBMUG00000021766 #23	PANK1 (ENSBMUG00000021708) #24
Domestic yak	MODERN SPECIES	17	KIF11 (ENSBGRG00000020999) #10	IDE (ENSBGRG00000020820) #11	ENSBGRG00000020719 #12	ENSBGRG00000020694	ENSBGRG00000020671	CPEB3 (ENSBGRG00000020594) #13	BTAF1 (ENSBGRG00000020034) #14	FGFBP3 (ENSBGRG00000020006) #15	TNKS2 (ENSBGRG00000019891) #16	PPP1R3C (ENSBGRG00000019847) #17	HECTD2 (ENSBGRG00000019144) #18	ENSBGRG00000019091	PCGF5 (ENSBGRG00000018971) #19	ANKRD1 (ENSBGRG00000018779) #20	RPP30 (ENSBGRG00000018614) #21	HTR7 (ENSBGRG00000018513) #22	ENSBGRG00000018495	ENSBGRG00000018400 #23	PANK1 (ENSBGRG00000018127) #24	ENSBGRG00000018089	SLC16A12 (ENSBGRG00000017960) #25	IFIT5 (ENSBGRG00000017931) ##26	IFIT1 (ENSBGRG00000017867) #26	IFIT3 (ENSBGRG00000017794) #28	IFIT2 (ENSBGRG00000017758) #31	LIPA (ENSBGRG00000017545) #32	ENSBGRG00000017517	CH25H (ENSBGRG00000017491) #33	FAS (ENSBGRG00000017283) #34	ACTA2 (ENSBGRG00000017216) #35	STAMBPL1 (ENSBGRG00000016961) #36
Bos_b	ANCESTRAL SPECIES	23	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921.k #10	ENSGT00940000155780 #11	ENSGT00390000009948.c.k #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989.n #23	ENSGT00940000157373 #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.a.a.b.a.a	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00940000154696 #32	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Cow	MODERN SPECIES	18	EXOC6 (ENSBTAG00000021116) #8	HHEX (ENSBTAG00000014217)	KIF11 (ENSBTAG00000009383) #10	IDE (ENSBTAG00000019759) #11	MARCHF5 (ENSBTAG00000020981) #12	CPEB3 (ENSBTAG00000015450) #13	BTAF1 (ENSBTAG00000016104) #14	ENSBTAG00000048707	TNKS2 (ENSBTAG00000009279) #16	ENSBTAG00000053518	PPP1R3C (ENSBTAG00000014831) #17	HECTD2 (ENSBTAG00000011651) #18	PCGF5 (ENSBTAG00000004964) #19	ANKRD1 (ENSBTAG00000011734) #20	RPP30 (ENSBTAG00000002973) #21	HTR7 (ENSBTAG00000008783) #22	ENSBTAG00000034597	ENSBTAG00000048815	KIF20B (ENSBTAG00000005708) #23	PANK1 (ENSBTAG00000010442) #24	SLC16A12 (ENSBTAG00000004662) #25	IFIT5 (ENSBTAG00000017367) ##26	IFIT1 (ENSBTAG00000007881) #26	IFIT3 (ENSBTAG00000009768) #28	IFIT2 (ENSBTAG00000034918) #31	LIPA (ENSBTAG00000003636) #32	ENSBTAG00000052813	FAS (ENSBTAG00000010785) #34	ACTA2 (ENSBTAG00000014614) #35	ENSBTAG00000049887	STAMBPL1 (ENSBTAG00000001298) #36
Hybrid Bos Indicus	MODERN SPECIES	18	HHEX (ENSBIXG00005004354)	ENSBIXG00005025474 #10	IDE (ENSBIXG00005025409) #11	ENSBIXG00005005888	ENSBIXG00005025287 #12	CPEB3 (ENSBIXG00005025261) #13	BTAF1 (ENSBIXG00005025149) #14	FGFBP3 (ENSBIXG00005024752) #15	TNKS2 (ENSBIXG00005024734) #16	PPP1R3C (ENSBIXG00005024657) #17	HECTD2 (ENSBIXG00005024625) #18	PCGF5 (ENSBIXG00005024540) #19	ENSBIXG00005024487	ANKRD1 (ENSBIXG00005024463) #20	RPP30 (ENSBIXG00005006914) #21	HTR7 (ENSBIXG00005006174) #22	KIF20B (ENSBIXG00005024297) #23	PANK1 (ENSBIXG00005024213) #24	ENSBIXG00005024097	SLC16A12 (ENSBIXG00005024072) #25	IFIT5 (ENSBIXG00005006284) ##26	LIPA (ENSBIXG00005023981) #32	IFIT1 (ENSBIXG00005004098) #26	IFIT3 (ENSBIXG00005023916) #28	IFIT2 (ENSBIXG00005004090) #31	CH25H (ENSBIXG00005023855) #33	FAS (ENSBIXG00005023818) #34	STAMBPL1 (ENSBIXG00005023795) #36	ACTA2 (ENSBIXG00005023710) #35	ENSBIXG00005023662	ANKRD22 (ENSBIXG00005004048) #37
American bison	MODERN SPECIES	3094	EXOC6 (ENSBBBG00000016620) #8	HHEX (ENSBBBG00000016547)	ENSBBBG00000016535	KIF11 (ENSBBBG00000007374) #10	IDE (ENSBBBG00000016483) #11	ENSBBBG00000008376 #12	CPEB3 (ENSBBBG00000004049) #13	ENSBBBG00000016226	BTAF1 (ENSBBBG00000004025) #14	TNKS2 (ENSBBBG00000016133) #16	PPP1R3C (ENSBBBG00000016106) #17	HECTD2 (ENSBBBG00000016095) #18	PCGF5 (ENSBBBG00000016004) #19	ANKRD1 (ENSBBBG00000015971) #20	RPP30 (ENSBBBG00000003974) #21	HTR7 (ENSBBBG00000015945) #22	ENSBBBG00000003963
Siberian musk deer	MODERN SPECIES	1163	EXOC6 (ENSMMSG00000010290) #8	ENSMMSG00000010687	HHEX (ENSMMSG00000010745)	KIF11 (ENSMMSG00000010787) #10	IDE (ENSMMSG00000010828) #11	MARCHF5 (ENSMMSG00000010975) #12	CPEB3 (ENSMMSG00000011018) #13	BTAF1 (ENSMMSG00000011097) #14	FGFBP3 (ENSMMSG00000011503) #15	TNKS2 (ENSMMSG00000011529) #16	PPP1R3C (ENSMMSG00000011617) #17	HECTD2 (ENSMMSG00000011643) #18	PCGF5 (ENSMMSG00000011720) #19	ANKRD1 (ENSMMSG00000011783) #20	RPP30 (ENSMMSG00000011808) #21	HTR7 (ENSMMSG00000011852) #22	ENSMMSG00000011885	ENSMMSG00000011925	ENSMMSG00000011945	ENSMMSG00000011963	KIF20B (ENSMMSG00000011982) #23	PANK1 (ENSMMSG00000012033) #24	SLC16A12 (ENSMMSG00000012145) #25	IFIT5 (ENSMMSG00000012168) ##26	IFIT1 (ENSMMSG00000012187) #26	IFIT3 (ENSMMSG00000012211) #28	IFIT2 (ENSMMSG00000012235) #31	LIPA (ENSMMSG00000012251) #32	CH25H (ENSMMSG00000012297) #33	FAS (ENSMMSG00000012306) #34	ACTA2 (ENSMMSG00000012340) #35
Yarkand deer	MODERN SPECIES	6	EXOC6 (ENSCHYG00000006774) #8	ENSCHYG00000006595	HHEX (ENSCHYG00000006561)	KIF11 (ENSCHYG00000006424) #10	IDE (ENSCHYG00000006140) #11	MARCHF5 (ENSCHYG00000006078) #12	CPEB3 (ENSCHYG00000005952) #13	BTAF1 (ENSCHYG00000005577) #14	FGFBP3 (ENSCHYG00000005534) #15	TNKS2 (ENSCHYG00000005401) #16	PPP1R3C (ENSCHYG00000005346) #17	HECTD2 (ENSCHYG00000005209) #18	PCGF5 (ENSCHYG00000005101) #19	ANKRD1 (ENSCHYG00000005059) #20	RPP30 (ENSCHYG00000005016) #21	HTR7 (ENSCHYG00000004976) #22	ENSCHYG00000004940	ENSCHYG00000004922	KIF20B (ENSCHYG00000004787) #23	PANK1 (ENSCHYG00000026916) #24	SLC16A12 (ENSCHYG00000026893) #25	IFIT3 (ENSCHYG00000026876) #28	IFIT2 (ENSCHYG00000026864) #31	ENSCHYG00000026859	ENSCHYG00000026853	ENSCHYG00000026839 #32	FAS (ENSCHYG00000026830) #34	ACTA2 (ENSCHYG00000026817) #35	STAMBPL1 (ENSCHYG00000026791) #36	ANKRD22 (ENSCHYG00000026783) #37	LIPM (ENSCHYG00000026759)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00390000013086	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d.m #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Greater horseshoe bat	MODERN SPECIES	7	CYP26A1 (ENSRFEG00010011911) ##7	CYP26C1 (ENSRFEG00010012145) #7	EXOC6 (ENSRFEG00010012254) #8	HHEX (ENSRFEG00010012651)	KIF11 (ENSRFEG00010012728) #10	IDE (ENSRFEG00010013085) #11	ENSRFEG00010013898	MARCHF5 (ENSRFEG00010013915) #12	CPEB3 (ENSRFEG00010013948) #13	BTAF1 (ENSRFEG00010014065) #14	FGFBP3 (ENSRFEG00010014160) #15	PPP1R3C (ENSRFEG00010015867) #17	HECTD2 (ENSRFEG00010015920) #18	PCGF5 (ENSRFEG00010016595) #19	RPP30 (ENSRFEG00010016677) #21	HTR7 (ENSRFEG00010016754) #22	KIF20B (ENSRFEG00010016868) #23	ENSRFEG00010018605	PANK1 (ENSRFEG00010018634) #24	SLC16A12 (ENSRFEG00010018846) #25	IFIT5 (ENSRFEG00010018858) ##26	IFIT1 (ENSRFEG00010018894) #26	IFIT3 (ENSRFEG00010018935) #28	IFIT2 (ENSRFEG00010018968) #31	LIPA (ENSRFEG00010018997) #32	ENSRFEG00010019037 #34	STAMBPL1 (ENSRFEG00010019067) #36	ACTA2 (ENSRFEG00010019133) #35	ANKRD22 (ENSRFEG00010019181) #37	LIPM (ENSRFEG00010019214)	LIPK (ENSRFEG00010019342)
Microbat	MODERN SPECIES	1121																HTR7 (ENSMLUG00000017165) #22	ENSMLUG00000023811	KIF20B (ENSMLUG00000012250) #23	PANK1 (ENSMLUG00000002554) #24	SLC16A12 (ENSMLUG00000005769) #25	IFIT5 (ENSMLUG00000005766) ##26	ENSMLUG00000016659 #26	IFIT3 (ENSMLUG00000016653) #28	IFIT2 (ENSMLUG00000016645) #31	LIPA (ENSMLUG00000016705) #32	CH25H (ENSMLUG00000008622) #33	FAS (ENSMLUG00000015521) #34	ACTA2 (ENSMLUG00000015509) #35	STAMBPL1 (ENSMLUG00000015481) #36	ANKRD22 (ENSMLUG00000003702) #37	LIPM (ENSMLUG00000003698)
Megabat	MODERN SPECIES	1277															RPP30 (ENSPVAG00000010524) #21	HTR7 (ENSPVAG00000010518) #22
Equus	ANCESTRAL SPECIES	9	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896.i.a #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.e ##26	ENSGT00950000182946.d.k.b #26	ENSGT00950000182946.c.a.f ##26	ENSGT00950000182946.d.k.a #26	ENSGT00950000182946.d.l #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36
Horse	MODERN SPECIES		CYP26C1 (ENSECAG00000023734) #7	EXOC6 (ENSECAG00000023825) #8	HHEX (ENSECAG00000005199)	KIF11 (ENSECAG00000006607) #10	IDE (ENSECAG00000010646) #11	MARCHF5 (ENSECAG00000000029) #12	CPEB3 (ENSECAG00000000077) #13	BTAF1 (ENSECAG00000007796) #14	FGFBP3 (ENSECAG00000004296) #15	TNKS2 (ENSECAG00000012810) #16	PPP1R3C (ENSECAG00000013703) #17	HECTD2 (ENSECAG00000013814) #18	ENSECAG00000016162 #19	ANKRD1 (ENSECAG00000016983) #20	RPP30 (ENSECAG00000021917) #21	HTR7 (ENSECAG00000022973) #22	ENSECAG00000048425	KIF20B (ENSECAG00000023331) #23	PANK1 (ENSECAG00000008032) #24	SLC16A12 (ENSECAG00000009558) #25	ENSECAG00000032818 ##26	ENSECAG00000047393	ENSECAG00000004433 #26	ENSECAG00000044124 ##26	ENSECAG00000045402 #26	ENSECAG00000033029 #26	LIPA (ENSECAG00000010840) #32	IFIT3 (ENSECAG00000010153) #28	IFIT2 (ENSECAG00000010185) #31	CH25H (ENSECAG00000004572) #33	FAS (ENSECAG00000013724) #34
Donkey	MODERN SPECIES	11	CYP26C1 (ENSEASG00005011142) #7	EXOC6 (ENSEASG00005011133) #8	HHEX (ENSEASG00005011129)	KIF11 (ENSEASG00005011108) #10	IDE (ENSEASG00005011102) #11	MARCHF5 (ENSEASG00005011099) #12	CPEB3 (ENSEASG00005023843) #13	BTAF1 (ENSEASG00005011085) #14	FGFBP3 (ENSEASG00005024292) #15	TNKS2 (ENSEASG00005011073) #16	PPP1R3C (ENSEASG00005011065) #17	HECTD2 (ENSEASG00005011060) #18	PCGF5 (ENSEASG00005011054) #19	ANKRD1 (ENSEASG00005011051) #20	RPP30 (ENSEASG00005011050) #21	HTR7 (ENSEASG00005011049) #22	KIF20B (ENSEASG00005011035) #23	PANK1 (ENSEASG00005011025) #24	SLC16A12 (ENSEASG00005011023) #25	ENSEASG00005011015 ##26	ENSEASG00005011018 #26	ENSEASG00005011021 ##26	ENSEASG00005011014 #26	ENSEASG00005011013 #26	IFIT3 (ENSEASG00005011738) #28	IFIT2 (ENSEASG00005011739) #31	LIPA (ENSEASG00005011741) #32	CH25H (ENSEASG00005024521) #33	FAS (ENSEASG00005011745) #34	ACTA2 (ENSEASG00005011763) #35	STAMBPL1 (ENSEASG00005012294) #36
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000157838	ENSGT00940000153062.A.a.a.b	ENSGT00940000163366
Ursidae	ANCESTRAL SPECIES	5	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00960000189939	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838.kb	ENSGT00940000163366	ENSGT00940000163811
Giant Panda	MODERN SPECIES	16	EXOC6 (ENSAMEG00000014019) #8	HHEX (ENSAMEG00000025336)	KIF11 (ENSAMEG00000014099) #10	IDE (ENSAMEG00000014146) #11	MARCHF5 (ENSAMEG00000014193) #12	ENSAMEG00000014204 #13	BTAF1 (ENSAMEG00000014218) #14	FGFBP3 (ENSAMEG00000018741) #15	TNKS2 (ENSAMEG00000014261) #16	PPP1R3C (ENSAMEG00000023833) #17	ENSAMEG00000026502	HECTD2 (ENSAMEG00000015516) #18	PCGF5 (ENSAMEG00000016758) #19	ANKRD1 (ENSAMEG00000016767) #20	RPP30 (ENSAMEG00000016776) #21	HTR7 (ENSAMEG00000016787) #22	ENSAMEG00000030464	KIF20B (ENSAMEG00000016790) #23	PANK1 (ENSAMEG00000016804) #24	ENSAMEG00000016819 #25	ENSAMEG00000018958 ##26	ENSAMEG00000030767	ENSAMEG00000016834	ENSAMEG00000025142	RET (ENSAMEG00000016880)	CSGALNACT2 (ENSAMEG00000016913)	RASGEF1A (ENSAMEG00000016919)	ENSAMEG00000016938	ENSAMEG00000018983	ZNF239 (ENSAMEG00000016941)	ZNF485 (ENSAMEG00000016943)
Ursus	ANCESTRAL SPECIES	6	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000174703	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT01030000240239	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838.kb	ENSGT00940000163811
Polar bear	MODERN SPECIES	197	HHEX (ENSUMAG00000002806)	ENSUMAG00000002802	KIF11 (ENSUMAG00000002681) #10	IDE (ENSUMAG00000002080) #11	MARCHF5 (ENSUMAG00000001951) #12	ENSUMAG00000001870 #13	BTAF1 (ENSUMAG00000001220) #14	TNKS2 (ENSUMAG00000001139) #16	PPP1R3C (ENSUMAG00000001134) #17	ENSUMAG00000001121	HECTD2 (ENSUMAG00000001041) #18	PCGF5 (ENSUMAG00000001025) #19	ENSUMAG00000001016	ANKRD1 (ENSUMAG00000000974) #20	RPP30 (ENSUMAG00000000971) #21	HTR7 (ENSUMAG00000000952) #22	ENSUMAG00000000941	KIF20B (ENSUMAG00000000373) #23	PANK1 (ENSUMAG00000000298) #24	SLC16A12 (ENSUMAG00000000188) #25	ENSUMAG00000000151 ##26	ENSUMAG00000000072	BMS1 (ENSUMAG00000016523)	RET (ENSUMAG00000016509)	CSGALNACT2 (ENSUMAG00000016502)	RASGEF1A (ENSUMAG00000016496)	ENSUMAG00000016486	ENSUMAG00000016485	ZNF485 (ENSUMAG00000016450)	ZNF32 (ENSUMAG00000016448)	ENSUMAG00000016431
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000167817	ENSGT00940000157750 #18	ENSGT00960000192304	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000168718.a	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.a	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000153582.b.a.b	ENSGT00390000014056.b.a
American mink	MODERN SPECIES	75	IDE (ENSNVIG00000020793) #11	MARH5 (ENSNVIG00000020768) #12	CPEB3 (ENSNVIG00000020717) #13	BTAF1 (ENSNVIG00000020659) #14	ENSNVIG00000020645	FGFBP3 (ENSNVIG00000020637) #15	TNKS2 (ENSNVIG00000020602) #16	PPR3C (ENSNVIG00000020586) #17	ENSNVIG00000020572	HECTD2 (ENSNVIG00000020493) #18	ENSNVIG00000020483	PCGF5 (ENSNVIG00000020436) #19	ENSNVIG00000020428	ANKRD1 (ENSNVIG00000020419) #20	RPP30 (ENSNVIG00000020403) #21	HTR7 (ENSNVIG00000020396) #22	ENSNVIG00000020388	KIF20B (ENSNVIG00000020314) #23	PANK1 (ENSNVIG00000020209) #24	SLC16A12 (ENSNVIG00000020192) #25	IFIT5 (ENSNVIG00000020183) ##26	BMS1 (ENSNVIG00000020158)	RET (ENSNVIG00000020085)	CSGALNACT2 (ENSNVIG00000020069)	RASGEF1A (ENSNVIG00000020041)	ENSNVIG00000020021	HNRNPF (ENSNVIG00000019999)	ZNF239 (ENSNVIG00000019977)	ZNF32 (ENSNVIG00000019922)	CXCL12 (ENSNVIG00000019903)	TMEM72 (ENSNVIG00000019859)
Ferret	MODERN SPECIES	187	ENSMPUG00000017215	HHEX (ENSMPUG00000017219)	KIF11 (ENSMPUG00000017220) #10	IDE (ENSMPUG00000017221) #11	MARCHF5 (ENSMPUG00000017226) #12	CPEB3 (ENSMPUG00000017227) #13	BTAF1 (ENSMPUG00000017228) #14	FGFBP3 (ENSMPUG00000020135) #15	TNKS2 (ENSMPUG00000017232) #16	PPP1R3C (ENSMPUG00000017235) #17	HECTD2 (ENSMPUG00000017236) #18	PCGF5 (ENSMPUG00000017239) #19	ENSMPUG00000017240	ANKRD1 (ENSMPUG00000017242) #20	RPP30 (ENSMPUG00000017258) #21	HTR7 (ENSMPUG00000017260) #22	KIF20B (ENSMPUG00000017262) #23	PANK1 (ENSMPUG00000017268) #24	SLC16A12 (ENSMPUG00000017273) #25	IFIT5 (ENSMPUG00000017274) ##26	ENSMPUG00000017275	BMS1 (ENSMPUG00000017276)	RET (ENSMPUG00000017277)	CSGALNACT2 (ENSMPUG00000017278)	RASGEF1A (ENSMPUG00000017281)	HNRNPF (ENSMPUG00000017283)	FXYD4 (ENSMPUG00000017285)	ENSMPUG00000017292	ENSMPUG00000017294	ZNF239 (ENSMPUG00000020136)	ZNF32 (ENSMPUG00000017296)
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00390000007844.d.b	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000014056
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000167251	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00390000007844.d.b	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000162764.A.a.a	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b
Dog	MODERN SPECIES	20	IDE (ENSCAFG00845030157) #11	MARCHF5 (ENSCAFG00845030038) #12	CPEB3 (ENSCAFG00845029945) #13	BTAF1 (ENSCAFG00845029828) #14	ENSCAFG00845029761	FGFBP3 (ENSCAFG00845029747) #15	TNKS2 (ENSCAFG00845029629) #16	ENSCAFG00845029588	PPP1R3C (ENSCAFG00845029564) #17	HECTD2 (ENSCAFG00845029473) #18	ENSCAFG00845029412	PCGF5 (ENSCAFG00845029332) #19	ENSCAFG00845029267	ANKRD1 (ENSCAFG00845029233) #20	RPP30 (ENSCAFG00845029161) #21	HTR7 (ENSCAFG00845029113) #22	KIF20B (ENSCAFG00845028669) #23	PANK1 (ENSCAFG00845028503) #24	ENSCAFG00845028455	SLC16A12 (ENSCAFG00845028413) #25	ENSCAFG00845028375 ##26	ENSCAFG00845028316	ENSCAFG00845028268	RET (ENSCAFG00845027877)	CSGALNACT2 (ENSCAFG00845027662)	RASGEF1A (ENSCAFG00845027425)	FXYD4 (ENSCAFG00845027267)	HNRNPF (ENSCAFG00845027205)	ZNF239 (ENSCAFG00845027097)	ZNF485 (ENSCAFG00845026946)	ZNF32 (ENSCAFG00845026885)
Dingo	MODERN SPECIES	165	IDE (ENSCAFG00020002136) #11	MARCHF5 (ENSCAFG00020002121) #12	CPEB3 (ENSCAFG00020001981) #13	BTAF1 (ENSCAFG00020001875) #14	ENSCAFG00020001865	FGFBP3 (ENSCAFG00020001860) #15	TNKS2 (ENSCAFG00020000625) #16	ENSCAFG00020000432	ENSCAFG00020000408	PPP1R3C (ENSCAFG00020000403) #17	HECTD2 (ENSCAFG00020000395) #18	PCGF5 (ENSCAFG00020000355) #19	ENSCAFG00020000337	ANKRD1 (ENSCAFG00020000278) #20	RPP30 (ENSCAFG00020000258) #21	HTR7 (ENSCAFG00020000145) #22	KIF20B (ENSCAFG00020025310) #23	ENSCAFG00020025289 #24	ENSCAFG00020025288	SLC16A12 (ENSCAFG00020025287) #25	IFIT5 (ENSCAFG00020025285) ##26	ENSCAFG00020025284	BMS1 (ENSCAFG00020025282)	RET (ENSCAFG00020025280)	CSGALNACT2 (ENSCAFG00020025278)	RASGEF1A (ENSCAFG00020025268)	ENSCAFG00020025263	ZNF239 (ENSCAFG00020025257)	ZNF485 (ENSCAFG00020025254)	ZNF32 (ENSCAFG00020025251)	CXCL12 (ENSCAFG00020025246)
Red fox	MODERN SPECIES		ENSVVUG00000021330	PANK1 (ENSVVUG00000021332) #24	ENSVVUG00000021335	KIF20B (ENSVVUG00000021348) #23	MARCH5 (ENSVVUG00000021366) #12	CPEB3 (ENSVVUG00000021375) #13	BTAF1 (ENSVVUG00000021393) #14	ENSVVUG00000021424	TNKS2 (ENSVVUG00000021474) #16	PPP1R3C (ENSVVUG00000021674) #17	HECTD2 (ENSVVUG00000021690) #18	PCGF5 (ENSVVUG00000021778) #19	ENSVVUG00000021780	ANKRD1 (ENSVVUG00000021783) #20	RPP30 (ENSVVUG00000021784) #21	HTR7 (ENSVVUG00000021785) #22	IDE (ENSVVUG00000021801) #11	KIF11 (ENSVVUG00000021817) #10	HHEX (ENSVVUG00000021820)	ENSVVUG00000021821	EXOC6 (ENSVVUG00000021823) #8	CYP26C1 (ENSVVUG00000021827) #7	CYP26A1 (ENSVVUG00000021829) ##7	MYOF (ENSVVUG00000021838)	CEP55 (ENSVVUG00000022022)	FFAR4 (ENSVVUG00000022026)	PDE6C (ENSVVUG00000022083)	FRA10AC1 (ENSVVUG00000022487)	LGI1 (ENSVVUG00000022494)	SLC35G1 (ENSVVUG00000022508)	PLCE1 (ENSVVUG00000022530)
Felidae	ANCESTRAL SPECIES	14	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00950000185246	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163366	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
Panthera	ANCESTRAL SPECIES	8	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.c ##26	ENSGT00940000153195.B	ENSGT00940000158499	ENSGT01050000244968.d	ENSGT00940000160822	ENSGT00940000164892	ENSGT00940000153062.A.a.a.b.c	ENSGT00940000157838	ENSGT00940000163811	ENSGT00940000153582.b.a.b	ENSGT00390000005848.m	ENSGT00390000014056
lion	MODERN SPECIES	11	CYP26C1 (ENSPLOG00000013983) #7	EXOC6 (ENSPLOG00000014159) #8	KIF11 (ENSPLOG00000014907) #10	IDE (ENSPLOG00000015191) #11	MARCHF5 (ENSPLOG00000015645) #12	CPEB3 (ENSPLOG00000015692) #13	BTAF1 (ENSPLOG00000015848) #14	FGFBP3 (ENSPLOG00000016161) #15	TNKS2 (ENSPLOG00000016200) #16	PPP1R3C (ENSPLOG00000016295) #17	HECTD2 (ENSPLOG00000016373) #18	PCGF5 (ENSPLOG00000016767) #19	ENSPLOG00000016807	ANKRD1 (ENSPLOG00000016826) #20	RPP30 (ENSPLOG00000016920) #21	HTR7 (ENSPLOG00000016954) #22	KIF20B (ENSPLOG00000017030) #23	PANK1 (ENSPLOG00000017128) #24	SLC16A12 (ENSPLOG00000017332) #25	ENSPLOG00000017375 ##26	BMS1 (ENSPLOG00000017414)	RET (ENSPLOG00000017480)	CSGALNACT2 (ENSPLOG00000017754)	RASGEF1A (ENSPLOG00000017794)	ENSPLOG00000017950	ENSPLOG00000017996	ZNF485 (ENSPLOG00000018025)	ZNF32 (ENSPLOG00000018063)	CXCL12 (ENSPLOG00000018193)	TMEM72 (ENSPLOG00000018265)	RASSF4 (ENSPLOG00000018321)
leopard	MODERN SPECIES	11	HHEX (ENSPPRG00000013009)	KIF11 (ENSPPRG00000014048) #10	IDE (ENSPPRG00000014274) #11	MARCHF5 (ENSPPRG00000014562) #12	CPEB3 (ENSPPRG00000015654) #13	BTAF1 (ENSPPRG00000018032) #14	FGFBP3 (ENSPPRG00000021085) #15	TNKS2 (ENSPPRG00000019676) #16	ENSPPRG00000020049 #17	ENSPPRG00000020690 #17	HECTD2 (ENSPPRG00000023104) #18	PCGF5 (ENSPPRG00000022835) #19	ENSPPRG00000022798	ANKRD1 (ENSPPRG00000022651) #20	RPP30 (ENSPPRG00000000115) #21	HTR7 (ENSPPRG00000000177) #22	KIF20B (ENSPPRG00000000421) #23	PANK1 (ENSPPRG00000000506) #24	SLC16A12 (ENSPPRG00000000621) #25	IFIT5 (ENSPPRG00000000707) ##26	BMS1 (ENSPPRG00000001311)	RET (ENSPPRG00000001685)	CSGALNACT2 (ENSPPRG00000001896)	RASGEF1A (ENSPPRG00000002016)	ENSPPRG00000002082	ENSPPRG00000002179	HNRNPF (ENSPPRG00000021222)	ZNF485 (ENSPPRG00000002559)	ZNF32 (ENSPPRG00000002792)	ENSPPRG00000021238	CXCL12 (ENSPPRG00000002910)
Tiger	MODERN SPECIES	135	BMS1 (ENSPTIG00000009652)	ENSPTIG00000010030	ENSPTIG00000009696 ##26	SLC16A12 (ENSPTIG00000010311) #25	PANK1 (ENSPTIG00000010408) #24	KIF20B (ENSPTIG00000010666) #23	MARCHF5 (ENSPTIG00000011726) #12	CPEB3 (ENSPTIG00000012018) #13	BTAF1 (ENSPTIG00000012653) #14	TNKS2 (ENSPTIG00000013504) #16	PPP1R3C (ENSPTIG00000013722) #17	HECTD2 (ENSPTIG00000013967) #18	PCGF5 (ENSPTIG00000014512) #19	ANKRD1 (ENSPTIG00000014828) #20	RPP30 (ENSPTIG00000014949) #21	HTR7 (ENSPTIG00000015045) #22
Cat	MODERN SPECIES	242	EXOC6 (ENSFCAG00000009932) #8	HHEX (ENSFCAG00000023875)	KIF11 (ENSFCAG00000006217) #10	IDE (ENSFCAG00000026411) #11	MARCHF5 (ENSFCAG00000034434) #12	CPEB3 (ENSFCAG00000032380) #13	BTAF1 (ENSFCAG00000000917) #14	FGFBP3 (ENSFCAG00000044895) #15	TNKS2 (ENSFCAG00000014953) #16	PPP1R3C (ENSFCAG00000009469) #17	HECTD2 (ENSFCAG00000022061) #18	PCGF5 (ENSFCAG00000045620) #19	ENSFCAG00000032188	ANKRD1 (ENSFCAG00000015725) #20	RPP30 (ENSFCAG00000029073) #21	HTR7 (ENSFCAG00000008544) #22	KIF20B (ENSFCAG00000041859) #23	PANK1 (ENSFCAG00000015455) #24	SLC16A12 (ENSFCAG00000000345) #25	ENSFCAG00000007421 ##26	ENSFCAG00000052328	BMS1 (ENSFCAG00000011220)	RET (ENSFCAG00000012999)	CSGALNACT2 (ENSFCAG00000013971)	RASGEF1A (ENSFCAG00000013972)	ENSFCAG00000042147	HNRNPF (ENSFCAG00000028219)	ENSFCAG00000026543	ZNF239 (ENSFCAG00000023538)	ZNF485 (ENSFCAG00000038778)	ZNF32 (ENSFCAG00000036973)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a #22
Common shrew	MODERN SPECIES	3448																HTR7 (ENSSARG00000001461) #22
Hedgehog	MODERN SPECIES	12436																HTR7 (ENSEEUG00000015813) #22
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00950000182946.c.b.a #31	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00800000124060.B ##7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a ##26	ENSGT00950000182946.d #26	ENSGT00950000182946.c.b.b #28	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860	ENSGT00940000161695	ENSGT00940000160031
Elephant	MODERN SPECIES	3	CYP26A1 (ENSLAFG00000022854) ##7	CYP26C1 (ENSLAFG00000006139) #7	EXOC6 (ENSLAFG00000003000) #8	HHEX (ENSLAFG00000005359)	KIF11 (ENSLAFG00000015454) #10	IDE (ENSLAFG00000006050) #11	MARCHF5 (ENSLAFG00000018718) #12	CPEB3 (ENSLAFG00000018716) #13	BTAF1 (ENSLAFG00000018710) #14	TNKS2 (ENSLAFG00000018705) #16	PPP1R3C (ENSLAFG00000027101) #17	HECTD2 (ENSLAFG00000003172) #18	PCGF5 (ENSLAFG00000011154) #19	ANKRD1 (ENSLAFG00000015939) #20	RPP30 (ENSLAFG00000015931) #21	HTR7 (ENSLAFG00000015928) #22	KIF20B (ENSLAFG00000004622) #23	PANK1 (ENSLAFG00000015729) #24	SLC16A12 (ENSLAFG00000022778) #25	IFIT5 (ENSLAFG00000011455) ##26	ENSLAFG00000028666 #26	ENSLAFG00000008208 #26	IFIT3 (ENSLAFG00000008209) #28	LIPA (ENSLAFG00000001585) #32	CH25H (ENSLAFG00000001587) #33	ENSLAFG00000029850	ENSLAFG00000000911 #34	ACTA2 (ENSLAFG00000000910) #35	STAMBPL1 (ENSLAFG00000017066) #36	ANKRD22 (ENSLAFG00000030797) #37	LIPM (ENSLAFG00000017061)
Tenrec	MODERN SPECIES	4342														ANKRD1 (ENSETEG00000018827) #20	RPP30 (ENSETEG00000018823) #21	HTR7 (ENSETEG00000018822) #22
Xenarthra	ANCESTRAL SPECIES	88	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000161748	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22
Armadillo	MODERN SPECIES	687	KIF11 (ENSDNOG00000017304) #10	IDE (ENSDNOG00000033551) #11	ENSDNOG00000035343	MARCHF5 (ENSDNOG00000019722) #12	CPEB3 (ENSDNOG00000048639) #13	BTAF1 (ENSDNOG00000002856) #14	ENSDNOG00000040849	FGFBP3 (ENSDNOG00000033896) #15	TNKS2 (ENSDNOG00000017651) #16	ENSDNOG00000047235	PPP1R3C (ENSDNOG00000045054) #17	HECTD2 (ENSDNOG00000019588) #18	PCGF5 (ENSDNOG00000005789) #19	ANKRD1 (ENSDNOG00000046981) #20	RPP30 (ENSDNOG00000010186) #21	HTR7 (ENSDNOG00000024730) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00800000124060.A.b #7	ENSGT00390000005739.a.b #8	ENSGT00940000164435 #9	ENSGT00940000155921 #10	ENSGT00940000155780 #11	ENSGT00390000009948.c #12	ENSGT00940000158949 #13	ENSGT00940000157500 #14	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373.b #24	ENSGT00940000156169 #25	ENSGT00950000182946.c.a.a ##26	ENSGT00950000182946.c.a.b ##26	ENSGT00950000182946.d.a #26	ENSGT00950000182946.d.b #26	ENSGT00390000004719	ENSGT00940000156414	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a.f	ENSGT00940000160392	ENSGT00940000158286	ENSGT00940000156525	ENSGT00940000155035
koala	MODERN SPECIES	150	CYP26C1 (ENSPCIG00000012635) #7	EXOC6 (ENSPCIG00000012627) #8	ENSPCIG00000012624 #9	KIF11 (ENSPCIG00000012620) #10	IDE (ENSPCIG00000017309) #11	MARCHF5 (ENSPCIG00000017306) #12	CPEB3 (ENSPCIG00000017302) #13	BTAF1 (ENSPCIG00000017290) #14	FGFBP3 (ENSPCIG00000017289) #15	TNKS2 (ENSPCIG00000016784) #16	PPP1R3C (ENSPCIG00000016762) #17	HECTD2 (ENSPCIG00000016760) #18	PCGF5 (ENSPCIG00000009625) #19	ANKRD1 (ENSPCIG00000015723) #20	RPP30 (ENSPCIG00000015730) #21	HTR7 (ENSPCIG00000015740) #22	ENSPCIG00000015744	KIF20B (ENSPCIG00000000668) #23	ENSPCIG00000034252 #24	ENSPCIG00000002392 #24	SLC16A12 (ENSPCIG00000009112) #25	ENSPCIG00000009119 ##26	ENSPCIG00000009121 ##26	ENSPCIG00000009123 #26	ENSPCIG00000009126 #26	CHST15 (ENSPCIG00000014522)	ENSPCIG00000028203	CPXM2 (ENSPCIG00000026833)	GPR26 (ENSPCIG00000026831)	ENSPCIG00000026830	ENSPCIG00000025845
Common wonbat	MODERN SPECIES	1067	CYP26A1 (ENSVURG00010019199) ##7	CYP26C1 (ENSVURG00010019158) #7	EXOC6 (ENSVURG00010019125) #8	ENSVURG00010019109 #9	KIF11 (ENSVURG00010019086) #10	IDE (ENSVURG00010019043) #11	MARCHF5 (ENSVURG00010019028) #12	CPEB3 (ENSVURG00010018925) #13	BTAF1 (ENSVURG00010018888) #14	TNKS2 (ENSVURG00010018866) #16	PPP1R3C (ENSVURG00010018860) #17	HECTD2 (ENSVURG00010018846) #18	PCGF5 (ENSVURG00010018839) #19	ANKRD1 (ENSVURG00010018832) #20	ENSVURG00010018823 #21	HTR7 (ENSVURG00010018822) #22	ENSVURG00010018819	ENSVURG00010018818	KIF20B (ENSVURG00010018810) #23	PANK1 (ENSVURG00010018800) #24	SLC16A12 (ENSVURG00010018792) #25	ENSVURG00010018787 ##26	ENSVURG00010018781 ##26	ENSVURG00010018780 #26	ENSVURG00010018775 #26	CHST15 (ENSVURG00010018756)	CPXM2 (ENSVURG00010018730)	GPR26 (ENSVURG00010018721)	ENSVURG00010018711	ACADSB (ENSVURG00010018698)	IKZF5 (ENSVURG00010018688)
Wallaby	MODERN SPECIES	5543																HTR7 (ENSMEUG00000006311) #22
Tasmanian devil	MODERN SPECIES	1	CYP26A1 (ENSSHAG00000017722) ##7	EXOC6 (ENSSHAG00000017753) #8	ENSSHAG00000024907 #9	KIF11 (ENSSHAG00000018218) #10	IDE (ENSSHAG00000018317) #11	MARCHF5 (ENSSHAG00000018432) #12	ENSSHAG00000028730	BTAF1 (ENSSHAG00000018664) #14	FGFBP3 (ENSSHAG00000028760) #15	TNKS2 (ENSSHAG00000018767) #16	PPP1R3C (ENSSHAG00000018833) #17	HECTD2 (ENSSHAG00000018873) #18	PCGF5 (ENSSHAG00000032079) #19	ANKRD1 (ENSSHAG00000007323) #20	RPP30 (ENSSHAG00000007452) #21	HTR7 (ENSSHAG00000007861) #22	ENSSHAG00000027737	KIF20B (ENSSHAG00000013656) #23	PANK1 (ENSSHAG00000014245) #24	SLC16A12 (ENSSHAG00000014683) #25	ENSSHAG00000021228 ##26	ENSSHAG00000002618 ##26	ENSSHAG00000001370 #26	ENSSHAG00000009520	CPXM2 (ENSSHAG00000023947)	GPR26 (ENSSHAG00000030669)	BUB3 (ENSSHAG00000010372)	HMX2 (ENSSHAG00000029091)	HMX3 (ENSSHAG00000031226)	ACADSB (ENSSHAG00000000928)	IKZF5 (ENSSHAG00000011508)
Opossum	MODERN SPECIES		CYP26A1 (ENSMODG00000006344) ##7	CYP26C1 (ENSMODG00000038230) #7	EXOC6 (ENSMODG00000006431) #8	ENSMODG00000006444 #9	KIF11 (ENSMODG00000006467) #10	ENSMODG00000006630 #11	MARCHF5 (ENSMODG00000006639) #12	ENSMODG00000051467	CPEB3 (ENSMODG00000006673) #13	BTAF1 (ENSMODG00000006697) #14	TNKS2 (ENSMODG00000006738) #16	PPP1R3C (ENSMODG00000006750) #17	HECTD2 (ENSMODG00000006780) #18	PCGF5 (ENSMODG00000006798) #19	ANKRD1 (ENSMODG00000006827) #20	HTR7 (ENSMODG00000006874) #22	ENSMODG00000024887	KIF20B (ENSMODG00000007283) #23	PANK1 (ENSMODG00000007301) #24	SLC16A12 (ENSMODG00000007350) #25	ENSMODG00000045416	ENSMODG00000007358 ##26	ENSMODG00000024882 ##26	ENSMODG00000038857 #26	CHST15 (ENSMODG00000007407)	CPXM2 (ENSMODG00000007502)	GPR26 (ENSMODG00000007533)	ENSMODG00000007542	HMX2 (ENSMODG00000007548)	HMX3 (ENSMODG00000007552)	ACADSB (ENSMODG00000007778)
Platypus	MODERN SPECIES	14	TMEM254 (ENSOANG00000019840)	ENSOANG00000047618	BMS1 (ENSOANG00000000662)	ENSOANG00000032096	RET (ENSOANG00000046180)	CSGALNACT2 (ENSOANG00000003169)	RASGEF1A (ENSOANG00000003170)	SFTPD (ENSOANG00000003173)	ENSOANG00000044423	ENSOANG00000003183	ENSOANG00000043159	PPP1R3C (ENSOANG00000040004) #17	HECTD2 (ENSOANG00000011999) #18	ANKRD1 (ENSOANG00000012001) #20	RPP30 (ENSOANG00000003415) #21	HTR7 (ENSOANG00000016001) #22	KIF20B (ENSOANG00000000743) #23	PANK1 (ENSOANG00000000745) #24	SLC16A12 (ENSOANG00000001086) #25	ENSOANG00000007390 #26	LIPA (ENSOANG00000047066) #32	CH25H (ENSOANG00000002397) #33	ENSOANG00000041139 #34	ACTA2 (ENSOANG00000000346) #35	STAMBPL1 (ENSOANG00000000463) #36	ANKRD22 (ENSOANG00000000465) #37	LIPM (ENSOANG00000000469)	ENSOANG00000019910	ENSOANG00000028726	ENSOANG00000039712	ATAD1 (ENSOANG00000008207)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438.a	ENSGT00940000156860.a.b.b
tuatara	MODERN SPECIES	1752									TNKS2 (ENSSPUG00000000832) #16	PPP1R3C (ENSSPUG00000000826) #17	HECTD2 (ENSSPUG00000000797) #18	PCGF5 (ENSSPUG00000000770) #19	ENSSPUG00000000756	ANKRD1 (ENSSPUG00000000739) #20	RPP30 (ENSSPUG00000000595) #21	HTR7 (ENSSPUG00000000584) #22	KIF20B (ENSSPUG00000000243) #23	ENSSPUG00000000146	PANK1 (ENSSPUG00000000111) #24	SLC16A12 (ENSSPUG00000000091) #25	ENSSPUG00000000082 #26	ENSSPUG00000000076 #26	ENSSPUG00000000073 #26	LIPA (ENSSPUG00000000064) #32	FAS (ENSSPUG00000019171) #34	ENSSPUG00000019169 #35	STAMBPL1 (ENSSPUG00000019163) #36	ANKRD22 (ENSSPUG00000019159) #37	ENSSPUG00000019158	ENSSPUG00000019155
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b
Laterata	ANCESTRAL SPECIES		ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438.a
Argentine black and white tegu	MODERN SPECIES	22	PDE6C (ENSSMRG00000013442)	FRA10AC1 (ENSSMRG00000013441)	LGI1 (ENSSMRG00000013440)	SLC35G1 (ENSSMRG00000013438)	PLCE1 (ENSSMRG00000013435)	NOC3L (ENSSMRG00000013433)	TBC1D12 (ENSSMRG00000013431)	ENSSMRG00000013430	FGFBP3 (ENSSMRG00000013429) #15	TNKS2 (ENSSMRG00000013428) #16	PPP1R3C (ENSSMRG00000013426) #17	HECTD2 (ENSSMRG00000013423) #18	PCGF5 (ENSSMRG00000013420) #19	ANKRD1 (ENSSMRG00000013418) #20	RPP30 (ENSSMRG00000013417) #21	HTR7 (ENSSMRG00000013413) #22	KIF20B (ENSSMRG00000013410) #23	ENSSMRG00000013409	PANK1 (ENSSMRG00000013407) #24	SLC16A12 (ENSSMRG00000013406) #25	ENSSMRG00000013402	ENSSMRG00000013400 #26	LIPA (ENSSMRG00000013398) #32	CH25H (ENSSMRG00000013396) #33	ACTA2 (ENSSMRG00000013394) #35	STAMBPL1 (ENSSMRG00000013392) #36	ANKRD22 (ENSSMRG00000013390) #37	ENSSMRG00000012970	ENSSMRG00000012969	ENSSMRG00000012900	ENSSMRG00000012880
Common wall lizard	MODERN SPECIES	13	SLC35G1 (ENSPMRG00000001844)	ENSPMRG00000001839	PLCE1 (ENSPMRG00000001736)	NOC3L (ENSPMRG00000001627)	TBC1D12 (ENSPMRG00000001590)	ENSPMRG00000001574	FGFBP3 (ENSPMRG00000001566) #15	TNKS2 (ENSPMRG00000001393) #16	PPP1R3C (ENSPMRG00000001310) #17	HECTD2 (ENSPMRG00000001273) #18	ENSPMRG00000001239	PCGF5 (ENSPMRG00000001220) #19	ENSPMRG00000001192 #20	ENSPMRG00000001183	RPP30 (ENSPMRG00000001121) #21	HTR7 (ENSPMRG00000001074) #22	KIF20B (ENSPMRG00000000706) #23	PANK1 (ENSPMRG00000000570) #24	SLC16A12 (ENSPMRG00000000542) #25	ENSPMRG00000000513	ENSPMRG00000000499 #26	ENSPMRG00000000485 #26	ENSPMRG00000000429 #32	ENSPMRG00000000388	ENSPMRG00000000355 #32	ENSPMRG00000000253 #32	ENSPMRG00000006398 #32	ENSPMRG00000006385 #32	ENSPMRG00000006303 #32	CH25H (ENSPMRG00000006293) #33	ENSPMRG00000006288
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00390000015792	ENSGT00950000182946 #26	ENSGT00940000154696.gb #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b
Lizard	MODERN SPECIES	833	SLC35G1 (ENSACAG00000007395)	PLCE1 (ENSACAG00000007404)	NOC3L (ENSACAG00000007551)	ENSACAG00000041124	ENSACAG00000007669	ENSACAG00000007745	FGFBP3 (ENSACAG00000007760) #15	TNKS2 (ENSACAG00000007762) #16	PPP1R3C (ENSACAG00000007886) #17	ENSACAG00000041911	HECTD2 (ENSACAG00000007890) #18	ENSACAG00000044420	PCGF5 (ENSACAG00000007900) #19	ANKRD1 (ENSACAG00000044654) #20	RPP30 (ENSACAG00000007996) #21	HTR7 (ENSACAG00000029017) #22	ENSACAG00000043905	ENSACAG00000042500	ENSACAG00000036669	ENSACAG00000036883	ENSACAG00000037376	KIF20B (ENSACAG00000008048) #23	ENSACAG00000044753	PANK1 (ENSACAG00000008075) #24
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000017833	ENSGT00990000211832	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.b #32	ENSGT00940000154696.gb.a #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a
Indian cobra	MODERN SPECIES	3	FRA10AC1 (ENSNNAG00000011395)	ENSNNAG00000011379	LGI1 (ENSNNAG00000011355)	SLC35G1 (ENSNNAG00000011342)	PLCE1 (ENSNNAG00000010597)	NOC3L (ENSNNAG00000009974)	TBC1D12 (ENSNNAG00000009855)	ENSNNAG00000009828	FGFBP3 (ENSNNAG00000009763) #15	TNKS2 (ENSNNAG00000009566) #16	PPP1R3C (ENSNNAG00000009545) #17	HECTD2 (ENSNNAG00000009393) #18	PCGF5 (ENSNNAG00000009358) #19	ANKRD1 (ENSNNAG00000009331) #20	RPP30 (ENSNNAG00000009305) #21	HTR7 (ENSNNAG00000009244) #22	ENSNNAG00000009212 #23	PANK1 (ENSNNAG00000009170) #24	SLC16A12 (ENSNNAG00000009144) #25	ENSNNAG00000009120 #26	ENSNNAG00000008968	ENSNNAG00000008946 #26	ENSNNAG00000008927 #26	ENSNNAG00000008543 #26	ENSNNAG00000008448 #26	ENSNNAG00000008361 #32	ENSNNAG00000008217 #32	ENSNNAG00000007892 #32	CH25H (ENSNNAG00000007871) #33	FAS (ENSNNAG00000007833) #34	ACTA2 (ENSNNAG00000007755) #35
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000017833	ENSGT00990000211832	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.a #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a	ENSGT00940000156860.b
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.bb.a #26	ENSGT00390000015792	ENSGT00950000182946.bb.b #26	ENSGT00940000154696.gb.a.a #32	ENSGT00940000154696.gb.a.b #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.a
Eastern brown snake	MODERN SPECIES	48	FRA10AC1 (ENSPTXG00000015469)	ENSPTXG00000015473	ENSPTXG00000015474	SLC35G1 (ENSPTXG00000015477)	PLCE1 (ENSPTXG00000015483)	NOC3L (ENSPTXG00000015774)	TBC1D12 (ENSPTXG00000015782)	ENSPTXG00000015783	FGFBP3 (ENSPTXG00000015785) #15	TNKS2 (ENSPTXG00000015787) #16	PPP1R3C (ENSPTXG00000015788) #17	HECTD2 (ENSPTXG00000015789) #18	PCGF5 (ENSPTXG00000015793) #19	ANKRD1 (ENSPTXG00000015794) #20	RPP30 (ENSPTXG00000015797) #21	HTR7 (ENSPTXG00000015804) #22	KIF20B (ENSPTXG00000015821) #23	ENSPTXG00000015857	PANK1 (ENSPTXG00000015861) #24	SLC16A12 (ENSPTXG00000015866) #25	ENSPTXG00000015871 #26	ENSPTXG00000015873	ENSPTXG00000015874 #26	ENSPTXG00000015875 #32	ENSPTXG00000015876 #32	CH25H (ENSPTXG00000015878) #33	ACTA2 (ENSPTXG00000015879) #35	STAMBPL1 (ENSPTXG00000015880) #36	ANKRD22 (ENSPTXG00000015881) #37	ENSPTXG00000015882	ENSPTXG00000016125
Mainland tiger snake	MODERN SPECIES	34	FRA10AC1 (ENSNSUG00000013043)	LGI1 (ENSNSUG00000013044)	SLC35G1 (ENSNSUG00000013045)	PLCE1 (ENSNSUG00000013046)	NOC3L (ENSNSUG00000013047)	TBC1D12 (ENSNSUG00000013054)	ENSNSUG00000013066	FGFBP3 (ENSNSUG00000013067) #15	TNKS2 (ENSNSUG00000013068) #16	ENSNSUG00000013636	PPP1R3C (ENSNSUG00000013638) #17	HECTD2 (ENSNSUG00000013640) #18	PCGF5 (ENSNSUG00000013641) #19	ANKRD1 (ENSNSUG00000013642) #20	RPP30 (ENSNSUG00000013643) #21	HTR7 (ENSNSUG00000013645) #22	ENSNSUG00000013647 #23	ENSNSUG00000013648	PANK1 (ENSNSUG00000013649) #24	SLC16A12 (ENSNSUG00000013651) #25	ENSNSUG00000013652 #26	ENSNSUG00000013654
Blue-lipped sea krait	MODERN SPECIES	3198																HTR7 (ENSLLTG00000001580) #22
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Chinese turtle	MODERN SPECIES	963													ENSPSIG00000000669	ANKRD1 (ENSPSIG00000012579) #20	RPP30 (ENSPSIG00000013213) #21	HTR7 (ENSPSIG00000015480) #22	ENSPSIG00000015654 #23	ENSPSIG00000015735 #23	ENSPSIG00000016505	PANK1 (ENSPSIG00000016510) #24	SLC16A12 (ENSPSIG00000016642) #25	ENSPSIG00000000678 #26	LIPA (ENSPSIG00000016953) #32	CH25H (ENSPSIG00000000687) #33	FAS (ENSPSIG00000005528) #34	ACTA2 (ENSPSIG00000006143) #35	STAMBPL1 (ENSPSIG00000006150) #36	ANKRD22 (ENSPSIG00000006757) #37	ENSPSIG00000007094	ENSPSIG00000007101	ENSPSIG00000007218
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000154696.s.a #32
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946.n #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.a.b.b.a.a	ENSGT00940000154696.s.a #32
Abingdon island giant tortoise	MODERN SPECIES	2661													PCGF5 (ENSCABG00000006677) #19	ANKRD1 (ENSCABG00000006679) #20	RPP30 (ENSCABG00000006682) #21	HTR7 (ENSCABG00000006684) #22	ENSCABG00000006685
Goode s thornscrub tortoise	MODERN SPECIES	21	PDE6C (ENSGEVG00005019822)	FRA10AC1 (ENSGEVG00005019863)	ENSGEVG00005019878	ENSGEVG00005019892	SLC35G1 (ENSGEVG00005019900)	PLCE1 (ENSGEVG00005019913)	NOC3L (ENSGEVG00005019934)	TBC1D12 (ENSGEVG00005019947)	TNKS2 (ENSGEVG00005005969) #16	PPP1R3C (ENSGEVG00005006048) #17	ENSGEVG00005006071 #18	ENSGEVG00005006118 #18	PCGF5 (ENSGEVG00005006190) #19	ANKRD1 (ENSGEVG00005006219) #20	RPP30 (ENSGEVG00005006258) #21	HTR7 (ENSGEVG00005006286) #22	KIF20B (ENSGEVG00005006327) #23	PANK1 (ENSGEVG00005006448) #24	SLC16A12 (ENSGEVG00005006580) #25	ENSGEVG00005006637 #26	LIPA (ENSGEVG00005006714) #32	CH25H (ENSGEVG00005007093) #33	FAS (ENSGEVG00005007132) #34	ACTA2 (ENSGEVG00005007170) #35	STAMBPL1 (ENSGEVG00005007213) #36	ANKRD22 (ENSGEVG00005007356) #37	ENSGEVG00005007381	ENSGEVG00005007517	ENSGEVG00005007595	ENSGEVG00005007655	ENSGEVG00005007700
Emydidae	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696.t #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438
Three-toed box turtle	MODERN SPECIES	39	RBP4 (ENSTMTG00000020849)	PDE6C (ENSTMTG00000020867)	FRA10AC1 (ENSTMTG00000020941)	ENSTMTG00000020958	ENSTMTG00000020982	SLC35G1 (ENSTMTG00000020988)	PLCE1 (ENSTMTG00000021028)	NOC3L (ENSTMTG00000021253)	TBC1D12 (ENSTMTG00000021340)	TNKS2 (ENSTMTG00000021618) #16	PPP1R3C (ENSTMTG00000021638) #17	HECTD2 (ENSTMTG00000021643) #18	PCGF5 (ENSTMTG00000021655) #19	ANKRD1 (ENSTMTG00000021665) #20	RPP30 (ENSTMTG00000021670) #21	HTR7 (ENSTMTG00000021674) #22	KIF20B (ENSTMTG00000021701) #23	ENSTMTG00000021790	ENSTMTG00000021794	PANK1 (ENSTMTG00000021801) #24	SLC16A12 (ENSTMTG00000021807) #25	ENSTMTG00000021813 #26	LIPA (ENSTMTG00000021818) #32	CH25H (ENSTMTG00000021822) #33	FAS (ENSTMTG00000021830) #34	ACTA2 (ENSTMTG00000021837) #35	STAMBPL1 (ENSTMTG00000021843) #36	ANKRD22 (ENSTMTG00000021855) #37	ENSTMTG00000021864	ENSTMTG00000021879	ENSTMTG00000021903
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1636																ENSCPBG00000008215 #22
painted turtle	MODERN SPECIES	744	FRA10AC1 (ENSCPBG00000026545)	LGI1 (ENSCPBG00000026544)	SLC35G1 (ENSCPBG00000026543)	ENSCPBG00000026541	ZNF513 (ENSCPBG00000026540)	PLCE1 (ENSCPBG00000026539)	NOC3L (ENSCPBG00000026538)	TBC1D12 (ENSCPBG00000026536)	FGFBP3 (ENSCPBG00000026534) #15	TNKS2 (ENSCPBG00000026533) #16	PPP1R3C (ENSCPBG00000026530) #17	HECTD2 (ENSCPBG00000026524) #18	PCGF5 (ENSCPBG00000026522) #19	ANKRD1 (ENSCPBG00000026520) #20	RPP30 (ENSCPBG00000026518) #21	ENSCPBG00000026517 #22	ENSCPBG00000026515 #23	ENSCPBG00000026511 #23	ENSCPBG00000026510	ENSCPBG00000026509	PANK1 (ENSCPBG00000026507) #24	ENSCPBG00000026506	SLC16A12 (ENSCPBG00000026505) #25	ENSCPBG00000026504 #26	LIPA (ENSCPBG00000026503) #32	CH25H (ENSCPBG00000026502) #33	FAS (ENSCPBG00000026500) #34	ACTA2 (ENSCPBG00000026499) #35	STAMBPL1 (ENSCPBG00000026498) #36	ANKRD22 (ENSCPBG00000026497) #37	ENSCPBG00000026495
Archosauria	ANCESTRAL SPECIES	7	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00940000167438	ENSGT00940000156860.a.b.b
Australian saltwater crocodile	MODERN SPECIES	68	PDE6C (ENSCPRG00005017106)	FRA10AC1 (ENSCPRG00005017118)	LGI1 (ENSCPRG00005017122)	SLC35G1 (ENSCPRG00005017127)	PLCE1 (ENSCPRG00005017134)	NOC3L (ENSCPRG00005017181)	TBC1D12 (ENSCPRG00005017223)	ENSCPRG00005017257	TNKS2 (ENSCPRG00005017332) #16	PPP1R3C (ENSCPRG00005017713) #17	HECTD2 (ENSCPRG00005017720) #18	PCGF5 (ENSCPRG00005017727) #19	ENSCPRG00005017737	ANKRD1 (ENSCPRG00005017742) #20	RPP30 (ENSCPRG00005017744) #21	HTR7 (ENSCPRG00005017749) #22	KIF20B (ENSCPRG00005017756) #23	PANK1 (ENSCPRG00005017765) #24	SLC16A12 (ENSCPRG00005017768) #25	ENSCPRG00005017770 #26	LIPA (ENSCPRG00005017773) #32	CH25H (ENSCPRG00005017776) #33	FAS (ENSCPRG00005017779) #34	ACTA2 (ENSCPRG00005017787) #35	STAMBPL1 (ENSCPRG00005017791) #36	ANKRD22 (ENSCPRG00005017798) #37	ENSCPRG00005017802	CXCL12 (ENSCPRG00005017813)	ERCC6 (ENSCPRG00005017820)	ENSCPRG00005017835	DRGX (ENSCPRG00005017838)
Aves	ANCESTRAL SPECIES	6	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00390000009005 #37	ENSGT00940000156860.a.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
African ostrich	MODERN SPECIES	720	RBP4 (ENSSCUG00000017031)	PDE6C (ENSSCUG00000017033)	FRA10AC1 (ENSSCUG00000017035)	LGI1 (ENSSCUG00000017037)	SLC35G1 (ENSSCUG00000017039)	PLCE1 (ENSSCUG00000017041)	NOC3L (ENSSCUG00000017050)	ENSSCUG00000017063	ENSSCUG00000017070	TNKS2 (ENSSCUG00000017073) #16	PPP1R3C (ENSSCUG00000017086) #17	HECTD2 (ENSSCUG00000017089) #18	PCGF5 (ENSSCUG00000010388) #19	ANKRD1 (ENSSCUG00000010393) #20	RPP30 (ENSSCUG00000010395) #21	HTR7 (ENSSCUG00000010397) #22	KIF20B (ENSSCUG00000010400) #23	PANK1 (ENSSCUG00000010408) #24	SLC16A12 (ENSSCUG00000010419) #25	ENSSCUG00000010421 #26	LIPA (ENSSCUG00000010427) #32	CH25H (ENSSCUG00000010431) #33	FAS (ENSSCUG00000010433) #34	ACTA2 (ENSSCUG00000010434) #35	STAMBPL1 (ENSSCUG00000010436) #36	ANKRD22 (ENSSCUG00000010439) #37	ENSSCUG00000010440	TMEM72 (ENSSCUG00000010443)	CXCL12 (ENSSCUG00000010445)	ERCC6 (ENSSCUG00000010448)	ENSSCUG00000010454
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Great tit	MODERN SPECIES	26	RBP4 (ENSPMJG00000002895)	PDE6C (ENSPMJG00000002832)	FRA10AC1 (ENSPMJG00000002826)	LGI1 (ENSPMJG00000002818)	SLC35G1 (ENSPMJG00000002811)	PLCE1 (ENSPMJG00000002800)	NOC3L (ENSPMJG00000000749)	TBC1D12 (ENSPMJG00000000718)	ENSPMJG00000000715	TNKS2 (ENSPMJG00000000697) #16	PPP1R3C (ENSPMJG00000000690) #17	HECTD2 (ENSPMJG00000000588) #18	PCGF5 (ENSPMJG00000000534) #19	ANKRD1 (ENSPMJG00000000521) #20	RPP30 (ENSPMJG00000000509) #21	HTR7 (ENSPMJG00000000502) #22	KIF20B (ENSPMJG00000000150) #23	PANK1 (ENSPMJG00000016062) #24	SLC16A12 (ENSPMJG00000016061) #25	ENSPMJG00000016060 #26	LIPA (ENSPMJG00000016059) #32	FAS (ENSPMJG00000016057) #34	ACTA2 (ENSPMJG00000016056) #35	STAMBPL1 (ENSPMJG00000016055) #36	ANKRD22 (ENSPMJG00000016054) #37	ENSPMJG00000016053	ENSPMJG00000016052	TMEM72 (ENSPMJG00000016051)	CXCL12 (ENSPMJG00000016047)	ERCC6 (ENSPMJG00000016044)	ENSPMJG00000016043
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Flycatcher	MODERN SPECIES	25	PDE6C (ENSFALG00000007837)	FRA10AC1 (ENSFALG00000007827)	LGI1 (ENSFALG00000007822)	SLC35G1 (ENSFALG00000007820)	PLCE1 (ENSFALG00000007813)	NOC3L (ENSFALG00000007807)	ENSFALG00000007800	ENSFALG00000015069	TNKS2 (ENSFALG00000007782) #16	PPP1R3C (ENSFALG00000015051) #17	HECTD2 (ENSFALG00000007748) #18	ENSFALG00000027332	PCGF5 (ENSFALG00000007736) #19	ANKRD1 (ENSFALG00000007718) #20	RPP30 (ENSFALG00000007711) #21	HTR7 (ENSFALG00000007708) #22	KIF20B (ENSFALG00000007702) #23	PANK1 (ENSFALG00000009687) #24	SLC16A12 (ENSFALG00000007681) #25	ENSFALG00000007677 #26	LIPA (ENSFALG00000007674) #32	FAS (ENSFALG00000007670) #34	ACTA2 (ENSFALG00000007659) #35	STAMBPL1 (ENSFALG00000007656) #36	ANKRD22 (ENSFALG00000028208) #37	ENSFALG00000007646	ENSFALG00000007578	ENSFALG00000007576	ENSFALG00000007570	ERCC6 (ENSFALG00000007563)	ENSFALG00000007558
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Common canary	MODERN SPECIES	7	RBP4 (ENSSCAG00000016859)	PDE6C (ENSSCAG00000016861)	FRA10AC1 (ENSSCAG00000016865)	LGI1 (ENSSCAG00000016869)	SLC35G1 (ENSSCAG00000016870)	PLCE1 (ENSSCAG00000016878)	NOC3L (ENSSCAG00000016901)	TBC1D12 (ENSSCAG00000016920)	ENSSCAG00000016923	TNKS2 (ENSSCAG00000016994) #16	PPP1R3C (ENSSCAG00000017044) #17	HECTD2 (ENSSCAG00000017047) #18	PCGF5 (ENSSCAG00000017052) #19	ANKRD1 (ENSSCAG00000017059) #20	RPP30 (ENSSCAG00000017061) #21	HTR7 (ENSSCAG00000017063) #22	KIF20B (ENSSCAG00000017066) #23	PANK1 (ENSSCAG00000017068) #24	SLC16A12 (ENSSCAG00000017071) #25	ENSSCAG00000017073 #26	LIPA (ENSSCAG00000017074) #32	CH25H (ENSSCAG00000017076) #33	FAS (ENSSCAG00000017082) #34	ACTA2 (ENSSCAG00000017084) #35	STAMBPL1 (ENSSCAG00000017087) #36	ENSSCAG00000017088	ANKRD22 (ENSSCAG00000017090) #37	ENSSCAG00000017092	TMEM72 (ENSSCAG00000017094)	CXCL12 (ENSSCAG00000017096)	ERCC6 (ENSSCAG00000017103)
Zebra finch	MODERN SPECIES	28	RBP4 (ENSTGUG00000008768)	PDE6C (ENSTGUG00000008698)	FRA10AC1 (ENSTGUG00000008669)	LGI1 (ENSTGUG00000021343)	SLC35G1 (ENSTGUG00000021562)	PLCE1 (ENSTGUG00000008633)	NOC3L (ENSTGUG00000008590)	TBC1D12 (ENSTGUG00000008570)	ENSTGUG00000008568	TNKS2 (ENSTGUG00000008510) #16	PPP1R3C (ENSTGUG00000008508) #17	HECTD2 (ENSTGUG00000008456) #18	PCGF5 (ENSTGUG00000023549) #19	ANKRD1 (ENSTGUG00000008417) #20	RPP30 (ENSTGUG00000008399) #21	HTR7 (ENSTGUG00000008388) #22	KIF20B (ENSTGUG00000008375) #23	PANK1 (ENSTGUG00000008362) #24	SLC16A12 (ENSTGUG00000008356) #25	ENSTGUG00000008354 #26	LIPA (ENSTGUG00000008318) #32	CH25H (ENSTGUG00000008317) #33	FAS (ENSTGUG00000023740) #34	ACTA2 (ENSTGUG00000029588) #35	STAMBPL1 (ENSTGUG00000019247) #36	ENSTGUG00000021117	ANKRD22 (ENSTGUG00000008300) #37	ENSTGUG00000029151	ENSTGUG00000008255	TMEM72 (ENSTGUG00000019796)	CXCL12 (ENSTGUG00000025609)
Medium ground finch	MODERN SPECIES	3	RBP4 (ENSGFOG00000002310)	PDE6C (ENSGFOG00000002341)	FRA10AC1 (ENSGFOG00000002397)	LGI1 (ENSGFOG00000002412)	SLC35G1 (ENSGFOG00000002428)	PLCE1 (ENSGFOG00000002518)	NOC3L (ENSGFOG00000003364)	TBC1D12 (ENSGFOG00000003546)	ENSGFOG00000003611	TNKS2 (ENSGFOG00000003647) #16	PPP1R3C (ENSGFOG00000003798) #17	HECTD2 (ENSGFOG00000003819) #18	PCGF5 (ENSGFOG00000003951) #19	ANKRD1 (ENSGFOG00000003963) #20	RPP30 (ENSGFOG00000003989) #21	HTR7 (ENSGFOG00000004004) #22	KIF20B (ENSGFOG00000004017) #23	PANK1 (ENSGFOG00000004047) #24	SLC16A12 (ENSGFOG00000004063) #25	ENSGFOG00000004077 #26	LIPA (ENSGFOG00000004091) #32	CH25H (ENSGFOG00000004288) #33	FAS (ENSGFOG00000004302) #34	ACTA2 (ENSGFOG00000004337) #35	STAMBPL1 (ENSGFOG00000004341) #36	ENSGFOG00000004363	ANKRD22 (ENSGFOG00000004939) #37	ENSGFOG00000004980	ENSGFOG00000005450	TMEM72 (ENSGFOG00000005484)	CXCL12 (ENSGFOG00000005495)
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Golden eagle	MODERN SPECIES	2	RBP4 (ENSACCG00020005893)	PDE6C (ENSACCG00020005929)	FRA10AC1 (ENSACCG00020005976)	LGI1 (ENSACCG00020006010)	SLC35G1 (ENSACCG00020006026)	PLCE1 (ENSACCG00020006089)	NOC3L (ENSACCG00020006308)	TBC1D12 (ENSACCG00020006463)	ENSACCG00020006536	TNKS2 (ENSACCG00020006924) #16	PPP1R3C (ENSACCG00020007174) #17	HECTD2 (ENSACCG00020007194) #18	PCGF5 (ENSACCG00020007220) #19	ANKRD1 (ENSACCG00020007245) #20	RPP30 (ENSACCG00020007257) #21	HTR7 (ENSACCG00020007285) #22	KIF20B (ENSACCG00020007324) #23	PANK1 (ENSACCG00020007493) #24	SLC16A12 (ENSACCG00020007600) #25	ENSACCG00020007602 #26	LIPA (ENSACCG00020007615) #32	CH25H (ENSACCG00020007629) #33	FAS (ENSACCG00020007638) #34	ACTA2 (ENSACCG00020007655) #35	STAMBPL1 (ENSACCG00020007681) #36	ANKRD22 (ENSACCG00020007709) #37	ENSACCG00020007746	ENSACCG00020007776	ENSACCG00020007802	TMEM72 (ENSACCG00020007811)	CXCL12 (ENSACCG00020007820)
Kakapo	MODERN SPECIES	22	PDE6C (ENSSHBG00005010844)	FRA10AC1 (ENSSHBG00005010816)	LGI1 (ENSSHBG00005010775)	SLC35G1 (ENSSHBG00005010743)	PLCE1 (ENSSHBG00005010625)	NOC3L (ENSSHBG00005010458)	TBC1D12 (ENSSHBG00005010421)	ENSSHBG00005010379	FGFBP3 (ENSSHBG00005010365) #15	TNKS2 (ENSSHBG00005010339) #16	PPP1R3C (ENSSHBG00005000546) #17	HECTD2 (ENSSHBG00005000528) #18	PCGF5 (ENSSHBG00005000496) #19	ANKRD1 (ENSSHBG00005000487) #20	RPP30 (ENSSHBG00005004414) #21	HTR7 (ENSSHBG00005004405) #22	ENSSHBG00005004375 #23	ENSSHBG00005004358 #23	PANK1 (ENSSHBG00005004351) #24	SLC16A12 (ENSSHBG00005004347) #25	ENSSHBG00005004339 #26	LIPA (ENSSHBG00005004334) #32	CH25H (ENSSHBG00005004330) #33	FAS (ENSSHBG00005004325) #34	ACTA2 (ENSSHBG00005004323) #35	STAMBPL1 (ENSSHBG00005004317) #36	ENSSHBG00005004289	ANKRD22 (ENSSHBG00005004266) #37	ENSSHBG00005004228	ENSSHBG00005003732	TMEM72 (ENSSHBG00005003640)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00960000190922	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT01030000236220	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00510000047107.A	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Chicken	MODERN SPECIES	35	RBP4A (ENSGALG00010020357)	PDE6C (ENSGALG00010020320)	FRA10AC1 (ENSGALG00010020313)	LGI1 (ENSGALG00010020295)	SLC35G1 (ENSGALG00010020236)	PLCE1 (ENSGALG00010019982)	NOC3L (ENSGALG00010019916)	ENSGALG00010019905	DD1CR (ENSGALG00010022835)	TNKS2 (ENSGALG00010020578) #16	PPP1R3C (ENSGALG00010020572) #17	HECTD2 (ENSGALG00010020550) #18	PCGF5 (ENSGALG00010020540) #19	ANKRD1 (ENSGALG00010020507) #20	RPP30 (ENSGALG00010020481) #21	HTR7 (ENSGALG00010020438) #22	KIF20B (ENSGALG00010018177) #23	ENSGALG00010018162	SLC16A12 (ENSGALG00010018154) #25	IFIT5 (ENSGALG00010018016) #26	LIPA (ENSGALG00010018011) #32	CH25H (ENSGALG00010022134) #33	FAS (ENSGALG00010022081) #34	ACTA2 (ENSGALG00010022071) #35	STAMBPL1 (ENSGALG00010022022) #36	ENSGALG00010022012	ANKRD22 (ENSGALG00010021999) #37	ENSGALG00010021886	TMEM72 (ENSGALG00010021875)	CXCL12 (ENSGALG00010021867)	ERCC6 (ENSGALG00010021829)
Turkey	MODERN SPECIES	28	RBP4 (ENSMGAG00000008841)	PDE6C (ENSMGAG00000008810)	FRA10AC1 (ENSMGAG00000008830)	LGI1 (ENSMGAG00000008780)	SLC35G1 (ENSMGAG00000008778)	PLCE1 (ENSMGAG00000008715)	NOC3L (ENSMGAG00000008676)	ENSMGAG00000008661	ENSMGAG00000015332	TNKS2 (ENSMGAG00000008555) #16	PPP1R3C (ENSMGAG00000015331) #17	HECTD2 (ENSMGAG00000008530) #18	PCGF5 (ENSMGAG00000008508) #19	ANKRD1 (ENSMGAG00000008455) #20	RPP30 (ENSMGAG00000008452) #21	HTR7 (ENSMGAG00000008444) #22	ENSMGAG00000021389 #23	PANK1 (ENSMGAG00000008418) #24	SLC16A12 (ENSMGAG00000008389) #25	ENSMGAG00000015330 #26	LIPA (ENSMGAG00000008364) #32	CH25H (ENSMGAG00000015329) #33	FAS (ENSMGAG00000008349) #34	ACTA2 (ENSMGAG00000008313) #35	STAMBPL1 (ENSMGAG00000008290) #36	ENSMGAG00000008183	ANKRD22 (ENSMGAG00000008271) #37	ENSMGAG00000008254	ENSMGAG00000018063	ENSMGAG00000008167	ENSMGAG00000008155
Japanese quail	MODERN SPECIES	24	PDE6C (ENSCJPG00005019044)	FRA10AC1 (ENSCJPG00005019043)	LGI1 (ENSCJPG00005019042)	SLC35G1 (ENSCJPG00005019041)	PLCE1 (ENSCJPG00005019039)	NOC3L (ENSCJPG00005019037)	TBC1D12 (ENSCJPG00005018990)	ENSCJPG00005018982	PPP1R3C (ENSCJPG00005018981) #17	TNKS2 (ENSCJPG00005018977) #16	HECTD2 (ENSCJPG00005018973) #18	ENSCJPG00005018965	PCGF5 (ENSCJPG00005018963) #19	ANKRD1 (ENSCJPG00005018927) #20	RPP30 (ENSCJPG00005018926) #21	HTR7 (ENSCJPG00005018925) #22	ENSCJPG00005018924	ENSCJPG00005018923	ENSCJPG00005018920 #23	ENSCJPG00005018918	PANK1 (ENSCJPG00005018916) #24	SLC16A12 (ENSCJPG00005018915) #25	ENSCJPG00005018914 #26	LIPA (ENSCJPG00005018913) #32	CH25H (ENSCJPG00005018912) #33	FAS (ENSCJPG00005018907) #34	ENSCJPG00005018906	ACTA2 (ENSCJPG00005018905) #35	STAMBPL1 (ENSCJPG00005018904) #36	ANKRD22 (ENSCJPG00005018903) #37	ENSCJPG00005018902
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000157825	ENSGT00390000017833	ENSGT00940000159793.e.b	ENSGT00940000153249.a	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.a	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000157373 #24	ENSGT00940000156169 #25	ENSGT00950000182946 #26	ENSGT00940000154696 #32	ENSGT00940000162142 #33	ENSGT00950000183126.b.b #34	ENSGT00940000154148.a.a #35	ENSGT00940000153710.b #36	ENSGT00940000156860.a.a.d.b	ENSGT00390000009005 #37	ENSGT00940000156860.a.a.d.a	ENSGT00940000156860.b	ENSGT00390000006888	ENSGT00390000014056
Duck	MODERN SPECIES	24	LGI1 (ENSAPLG00000013787)	SLC35G1 (ENSAPLG00000013753)	PLCE1 (ENSAPLG00000013314)	NOC3L (ENSAPLG00000012432)	TBC1D12 (ENSAPLG00000012124)	ENSAPLG00000012116	ENSAPLG00000019728	ENSAPLG00000018936	ENSAPLG00000020120 #15	TNKS2 (ENSAPLG00000011056) #16	PPP1R3C (ENSAPLG00000001908) #17	HECTD2 (ENSAPLG00000010621) #18	PCGF5 (ENSAPLG00000010307) #19	ANKRD1 (ENSAPLG00000010068) #20	RPP30 (ENSAPLG00000009959) #21	HTR7 (ENSAPLG00000021064) #22	PANK1 (ENSAPLG00000004016) #24	SLC16A12 (ENSAPLG00000003860) #25	LIPA (ENSAPLG00000018116) #32	CH25H (ENSAPLG00000002172) #33	ENSAPLG00000021208 #34	ACTA2 (ENSAPLG00000002915) #35	STAMBPL1 (ENSAPLG00000002723) #36	ENSAPLG00000017704	ANKRD22 (ENSAPLG00000001838) #37	ENSAPLG00000001900	ENSAPLG00000015611	TMEM72 (ENSAPLG00000030711)	CXCL12 (ENSAPLG00000015341)	ERCC6 (ENSAPLG00000016335)	ENSAPLG00000028230
Pink-footed goose	MODERN SPECIES	75	PDE6C (ENSABRG00000011575)	FRA10AC1 (ENSABRG00000011604)	LGI1 (ENSABRG00000011628)	SLC35G1 (ENSABRG00000011631)	PLCE1 (ENSABRG00000011639)	NOC3L (ENSABRG00000011670)	TBC1D12 (ENSABRG00000011695)	ENSABRG00000011723	ENSABRG00000011728	TNKS2 (ENSABRG00000011742) #16	PPP1R3C (ENSABRG00000011767) #17	HECTD2 (ENSABRG00000011771) #18	PCGF5 (ENSABRG00000011791) #19	ANKRD1 (ENSABRG00000011807) #20	RPP30 (ENSABRG00000011826) #21	HTR7 (ENSABRG00000011854) #22	KIF20B (ENSABRG00000011871) #23	PANK1 (ENSABRG00000011957) #24	SLC16A12 (ENSABRG00000011979) #25	ENSABRG00000011986 #26	LIPA (ENSABRG00000011992) #32	CH25H (ENSABRG00000012002) #33	ENSABRG00000012026 #34	ACTA2 (ENSABRG00000012041) #35	STAMBPL1 (ENSABRG00000012052) #36	ENSABRG00000012061	ANKRD22 (ENSABRG00000012077) #37	ENSABRG00000012089	TMEM72 (ENSABRG00000012143)	CXCL12 (ENSABRG00000012153)	ERCC6 (ENSABRG00000012181)
Anura	ANCESTRAL SPECIES	177	ENSGT00940000159406	ENSGT00940000166052	ENSGT00940000160543	ENSGT00940000164766	ENSGT00940000157356	ENSGT00390000008540	ENSGT00940000156410	ENSGT00940000157037.b.b	ENSGT00940000154372.b #15	ENSGT00940000159911 #16	ENSGT00940000155648.B #17	ENSGT00940000157750 #18	ENSGT00940000155896 #19	ENSGT00940000153956.a #20	ENSGT00390000000883 #21	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00940000165449	ENSGT00940000157373 #24	ENSGT00940000156169 #25
Frog	MODERN SPECIES	7	slc22a15.2 (ENSXETG00000020972)	plce1 (ENSXETG00000030514)	ENSXETG00000049270	noc3l (ENSXETG00000020975)	tbc1d12 (ENSXETG00000030404)	drd1c (ENSXETG00000020979)	fgfbp3 (ENSXETG00000039895) #15	tnks2 (ENSXETG00000020983) #16	ppp1r3c (ENSXETG00000037792) #17	hectd2 (ENSXETG00000031534) #18	pcgf5 (ENSXETG00000032043) #19	ankrd1 (ENSXETG00000021783) #20	ENSXETG00000033322	rpp30 (ENSXETG00000021785) #21	itln2 (ENSXETG00000038421)	htr7 (ENSXETG00000031961) #22	ENSXETG00000034877	kif20b (ENSXETG00000026373) #23	pank1 (ENSXETG00000032625) #24	slc16a12 (ENSXETG00000021814) #25	ENSXETG00000046204	ifit1b (ENSXETG00000048583) #26	ifit5 (ENSXETG00000047612) #26	ENSXETG00000042641 #26	XB959836 [provisional:ifit5] (ENSXETG00000037825) #26	ENSXETG00000045477 #26	ENSXETG00000044793 #26	ENSXETG00000042889 #26	slc35g1 (ENSXETG00000003728)	lgi1 (ENSXETG00000003729)	fra10ac1 (ENSXETG00000026367)
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000013877	TNKS2 (ENSLLEG00000013173) #16	ENSLLEG00000013136	KLHL10 (ENSLLEG00000013069)	ENSLLEG00000013052	ENSLLEG00000012991	ENSLLEG00000012935	PPP1R3C (ENSLLEG00000012902) #17	ENSLLEG00000012891	ENSLLEG00000012874	HECTD2 (ENSLLEG00000012753) #18	PCGF5 (ENSLLEG00000012628) #19	ANKRD1 (ENSLLEG00000012373) #20	ENSLLEG00000012301	ENSLLEG00000012211 #21	HTR7 (ENSLLEG00000014264) #22	ENSLLEG00000014224	KIF20B (ENSLLEG00000013809) #23	ENSLLEG00000013752	PANK1 (ENSLLEG00000013698) #24	ENSLLEG00000013670	SLC16A12 (ENSLLEG00000013586) #25	ENSLLEG00000013564	ENSLLEG00000013374 #26	ENSLLEG00000013277 #26	ENSLLEG00000013236 #37	ENSLLEG00000013076 #32	ENSLLEG00000013047 #26	ENSLLEG00000013014 #26	ENSLLEG00000012977 #26	ENSLLEG00000012917 #26
Coelacanth	MODERN SPECIES	3362																HTR7 (ENSLACG00000000885) #22	ENSLACG00000003796 #23
Actinopterygii	ANCESTRAL SPECIES	7	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000163053	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946 #26	ENSGT00940000156169 #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645	ENSGT00390000017833
Neopterygii	ANCESTRAL SPECIES	10	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142 #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645	ENSGT00390000017833
Spotted gar	MODERN SPECIES	275													slc16a12b (ENSLOCG00000000022) #25	pank1b (ENSLOCG00000000023) #24	zgc:65997 (ENSLOCG00000000024)	HTR7 (ENSLOCG00000000025) #22	KIF20B (ENSLOCG00000000026) #23	rpp30 (ENSLOCG00000000031) #21	ankrd1b (ENSLOCG00000000035) #20	pcgf5b (ENSLOCG00000000040) #19	HECTD2 (ENSLOCG00000000043) #18
Osteoglossocephalai	ANCESTRAL SPECIES	15							ENSGT00940000182525	ENSGT00940000155648.B.b #17	ENSGT00940000154148.a.a #35	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373 #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a #22	ENSGT00940000155989 #23	ENSGT00390000000883 #21	ENSGT00940000153956.a #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	82	ENSGT00940000165723.a	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000015792	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35
Otomorpha	ANCESTRAL SPECIES	454													ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h
Otophysi	ANCESTRAL SPECIES	96													ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165073.a.b.b.b.a.a
Characiphysae	ANCESTRAL SPECIES	54											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.b #23	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676
Channel catfish	MODERN SPECIES	28	ppp1r3ca (ENSIPUG00000017690) #17	ENSIPUG00000017696 #15	ENSIPUG00000017701	ENSIPUG00000017708	fam98a (ENSIPUG00000017737)	RASGRP3 (ENSIPUG00000017788)	LTBP1 (ENSIPUG00000017869)	ttc27 (ENSIPUG00000017965)	ENSIPUG00000017982	SGMS1 (ENSIPUG00000017991)	minpp1a (ENSIPUG00000018005)	ENSIPUG00000018017	fas (ENSIPUG00000018072) #34	SLC16A12 (ENSIPUG00000018118) #25	pank1a (ENSIPUG00000018133) #24	ENSIPUG00000018148 #22	ENSIPUG00000018156 #23	ENSIPUG00000018208	BIRC6 (ENSIPUG00000018224)	yipf4 (ENSIPUG00000018317)	exo1 (ENSIPUG00000018328)	ENSIPUG00000018358	ENSIPUG00000018388	ENSIPUG00000018391	mrps5 (ENSIPUG00000018395)	malb (ENSIPUG00000018407)	ENSIPUG00000018415	ENSIPUG00000018424	nphp1 (ENSIPUG00000018431)	MTLN (ENSIPUG00000018471)	slc8a1b (ENSIPUG00000018476)
Characiphysae_b	ANCESTRAL SPECIES	53											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000154902.nb.a
Characoidei	ANCESTRAL SPECIES	63											ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e.a #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000154902.nb.a
Mexicana tetra	MODERN SPECIES	24	ENSAMXG00000011080	MAP4K3 (ENSAMXG00000011068)	ENSAMXG00000011063	morn2 (ENSAMXG00000039447)	znf593 (ENSAMXG00000039647)	selenon (ENSAMXG00000011032)	ENSAMXG00000011027	minpp1a (ENSAMXG00000040249)	minpp1a (ENSAMXG00000011005)	papss2a (ENSAMXG00000010997)	ENSAMXG00000034893	ENSAMXG00000041395 #34	SLC16A12 (ENSAMXG00000010978) #25	pank1a (ENSAMXG00000010968) #24	zgc:65997 (ENSAMXG00000038112)	HTR7 (ENSAMXG00000040600) #22	ENSAMXG00000010935	ENSAMXG00000010932	exo1 (ENSAMXG00000010918)	yipf4 (ENSAMXG00000010903)	BIRC6 (ENSAMXG00000010869)	si:dkey-221l4.10 (ENSAMXG00000028340)	jade1 (ENSAMXG00000017786)	ENSAMXG00000030556	asmt2 (ENSAMXG00000017811)	pgrmc2 (ENSAMXG00000034920)	ENSAMXG00000006805	ENSAMXG00000033040	ENSAMXG00000012704	ENSAMXG00000029882	SANBR (ENSAMXG00000001065)
Red-bellied piranha	MODERN SPECIES	1229												ENSPNAG00000012713 #26	ENSPNAG00000012703 #26	slc16a12b (ENSPNAG00000002362) #25	pank1b (ENSPNAG00000012679) #24	ENSPNAG00000012639 #22
Electric eel	MODERN SPECIES	841											papss2a (ENSEEEG00000019858)	ENSEEEG00000019863	ENSEEEG00000019865	SLC16A12 (ENSEEEG00000019866) #25	pank1a (ENSEEEG00000019867) #24	HTR7 (ENSEEEG00000019869) #22	ENSEEEG00000019945
Cyprinoidei	ANCESTRAL SPECIES	76	ENSGT00390000008178	ENSGT00390000016883	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000158306	ENSGT00390000018409.h	ENSGT00390000009613.a	ENSGT00940000154335.b.e	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00950000182946.lb.b #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165073.a.b.b.b.a.a.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	313	ENSGT00940000157597.e.b	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b.a #34	ENSGT00940000157373.l.g #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a #22	ENSGT00940000155989.e.d #23	ENSGT00940000153956.a.b.b #20	ENSGT00940000155896.k.h #19	ENSGT00940000155648.B.b.d #17	ENSGT00940000154372.b.c #15	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00940000167863.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w	ENSGT00940000153168.B.c.b	ENSGT00510000047676.c	ENSGT00940000165200.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	5	ran (ENSCARG00000014915)	stx3b (ENSCARG00000014972)	KDM2A (ENSCARG00000015168)	ANKRD13D (ENSCARG00000017308)	ctbp1 (ENSCARG00000017487)	spon2a (ENSCARG00000017726)	ENSCARG00000017747	ENSCARG00000017752	ENSCARG00000017755	ENSCARG00000017766	papss2a (ENSCARG00000017816)	ENSCARG00000018270	ENSCARG00000018290 #34	pank1a (ENSCARG00000018306) #24	zgc:65997 (ENSCARG00000018328)	ENSCARG00000018336 #22	ENSCARG00000018351 #23	ANKRD1 (ENSCARG00000018389) #20	pcgf5a (ENSCARG00000018427) #19	ppp1r3ca (ENSCARG00000018448) #17	ENSCARG00000018466 #15	ENSCARG00000018471	ENSCARG00000018526	ENSCARG00000019370	rasgrp3 (ENSCARG00000019403)	LTBP1 (ENSCARG00000020520)	ENSCARG00000020768	BIRC6 (ENSCARG00000020819)	yipf4 (ENSCARG00000021429)	exo1 (ENSCARG00000021447)	ENSCARG00000021525
Goldfish	MODERN SPECIES	2379							ENSCARG00000060847	ENSCARG00000060833	sgms1a (ENSCARG00000060822)	minpp1a (ENSCARG00000060801)	papss2a (ENSCARG00000060440)	ENSCARG00000060334	ENSCARG00000060322 #34	pank1a (ENSCARG00000060199) #24	zgc:65997 (ENSCARG00000069957)	ENSCARG00000069953 #22
Cyprininae_a	ANCESTRAL SPECIES	304	ENSGT00940000157597.e.a.a.a	ENSGT00940000155345.q.d	ENSGT00940000153408.B.t.d.a.a	ENSGT00390000008178.k	ENSGT00390000016883.l	ENSGT00390000017746.h	ENSGT00940000157593.b	ENSGT00940000165789	ENSGT00940000158306.v.b	ENSGT00390000018409.h.c	ENSGT00390000009613.a.v.b	ENSGT00940000154335.b.e.b	ENSGT00950000183126.b.b.a #34	ENSGT00940000157373.l.g #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.a #22	ENSGT00940000155989.e.d #23	ENSGT00940000153956.a.b.b #20	ENSGT00940000155896.k.h #19	ENSGT00940000155648.B.b.d #17	ENSGT00940000154372.b.c #15	ENSGT00940000157037.b.b.b.f	ENSGT00940000156410.h.h	ENSGT00440000037341.a	ENSGT00940000158843.i	ENSGT00940000155823.B.d	ENSGT00500000044929.a	ENSGT00940000156126.w	ENSGT00940000153168.B.c.b	ENSGT00510000047676.c	ENSGT00940000165200.a
Common carp reference	MODERN SPECIES	4	b3gnt2b (ENSCCRG00000082775)	ENSCCRG00000073128	ENSCCRG00000003107	ENSCCRG00000002941	pex13 (ENSCCRG00000003017)	ENSCCRG00000027247	slc18a2 (ENSCCRG00000027262)	ENSCCRG00000080142	sgms1a (ENSCCRG00000027300)	minpp1a (ENSCCRG00000027401)	papss2a (ENSCCRG00000027413)	ptena (ENSCCRG00000077527)	ENSCCRG00000055135 #34	pank1a (ENSCCRG00000027871) #24	zgc:65997 (ENSCCRG00000070786)	ENSCCRG00000082306 #22	ENSCCRG00000077844 #23	ENSCCRG00000024565 #20	pcgf5a (ENSCCRG00000024551) #19	ppp1r3ca (ENSCCRG00000026811) #17	ENSCCRG00000076912 #15	ENSCCRG00000049382	ENSCCRG00000017745	FAM98A (ENSCCRG00000032614)	rasgrp3 (ENSCCRG00000032622)	LTBP1 (ENSCCRG00000026896)	ttc27 (ENSCCRG00000075792)	BIRC6 (ENSCCRG00000027051)	yipf4 (ENSCCRG00000028446)	exo1 (ENSCCRG00000028456)	ENSCCRG00000067820
Golden-line barbel	MODERN SPECIES	17	EHBP1 (ENSSGRG00000006607)	b3gnt2b (ENSSGRG00000006584)	XPO1 (ENSSGRG00000004767)	SANBR (ENSSGRG00000004691)	PDZD8 (ENSSGRG00000004690)	slc18a2 (ENSSGRG00000004688)	ENSSGRG00000004682	sgms1a (ENSSGRG00000004680)	minpp1a (ENSSGRG00000004678)	papss2a (ENSSGRG00000001415)	ptena (ENSSGRG00000001060)	ENSSGRG00000001058 #34	pank1a (ENSSGRG00000001051) #24	zgc:65997 (ENSSGRG00000001038)	zgc:65997 (ENSSGRG00000001035)	ENSSGRG00000001033 #22	ANKRD1 (ENSSGRG00000001024) #20	pcgf5a (ENSSGRG00000001021) #19	ppp1r3ca (ENSSGRG00000001019) #17	ENSSGRG00000001017 #15	ENSSGRG00000001014	ENSSGRG00000000743	ENSSGRG00000000727	rasgrp3 (ENSSGRG00000000721)	LTBP1 (ENSSGRG00000000690)	ENSSGRG00000000689	ttc27 (ENSSGRG00000000500)	BIRC6 (ENSSGRG00000000393)	exo1 (ENSSGRG00000000327)	ENSSGRG00000000308	slc8a1b (ENSSGRG00000000277)
Cyprininae	ANCESTRAL SPECIES	40	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b #34	ENSGT00950000182946.lb.b.f.b #26	ENSGT00950000182946.lb.b.f.a #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l.h #24	ENSGT01010000222287.B.a.a.a.a.a.a.b #22	ENSGT00940000155989.e.c #23	ENSGT00940000153956.a.b.a #20	ENSGT00940000155896.k.g #19	ENSGT00940000155648.B.b.c #17	ENSGT00940000154372.b.d #15	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00440000037341.a	ENSGT00940000158843.j	ENSGT00940000155823.B.c	ENSGT00500000044929.b	ENSGT00940000156126.x	ENSGT00940000153168.B.c.a	ENSGT00510000047676.d	ENSGT00940000165200.b.a.a
Goldfish	MODERN SPECIES	8	ENSCARG00000024218	mtfr1l (ENSCARG00000024225)	STAC (ENSCARG00000024237)	pacrg (ENSCARG00000024273)	qkia (ENSCARG00000024292)	PTAFR (ENSCARG00000024362)	ENSCARG00000024370	papss2a (ENSCARG00000024486)	ptena (ENSCARG00000027288)	ENSCARG00000027478 #34	ENSCARG00000027517 #26	ENSCARG00000027527 #26	ENSCARG00000027531 #26	SLC16A12 (ENSCARG00000027535) #25	pank1a (ENSCARG00000027548) #24	ENSCARG00000027686 #22	ENSCARG00000027713 #23	ctsl.1 (ENSCARG00000027765)	vgll2b (ENSCARG00000027830)	nipal3 (ENSCARG00000027840)	rcan3 (ENSCARG00000027903)	jade1 (ENSCARG00000027942)	HIOMT (ENSCARG00000027952)	pgrmc2 (ENSCARG00000027959)	ENSCARG00000027972	calm1a (ENSCARG00000028100)	ttc7b (ENSCARG00000028166)	mrpl57 (ENSCARG00000029017)	fam149b1 (ENSCARG00000029033)	ENSCARG00000029064	ENSCARG00000029077
Cyprininae_a	ANCESTRAL SPECIES	35	ENSGT00940000153408.B.t.d.a.b	ENSGT00390000008178.l	ENSGT00390000016883.k	ENSGT00390000017746.g	ENSGT00940000157593.a	ENSGT00700000104522	ENSGT00940000158306.v.a	ENSGT00390000018409.h.d	ENSGT00390000009613.a.v.a	ENSGT00940000154335.b.e.a	ENSGT00950000183126.b.b.b #34	ENSGT00950000182946.lb.b.f.b #26	ENSGT00950000182946.lb.b.f.a #26	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l.h #24	ENSGT01010000222287.B.a.a.a.a.a.a.b #22	ENSGT00940000155989.e.c #23	ENSGT00940000153956.a.b.a #20	ENSGT00940000155896.k.g #19	ENSGT00940000155648.B.b.c #17	ENSGT00940000154372.b.d #15	ENSGT00940000157037.b.b.b.e	ENSGT00940000156410.h.g	ENSGT00940000167863.b	ENSGT00940000158843.j	ENSGT00940000155823.B.c	ENSGT00500000044929.b	ENSGT00940000156126.x	ENSGT00940000153168.B.c.a	ENSGT00510000047676.d	ENSGT00940000165200.b.a.a
Common carp reference	MODERN SPECIES	30	ENSCCRG00000003438	ENSCCRG00000003451	ENSCCRG00000055884	ENSCCRG00000057670	PDZD8 (ENSCCRG00000013188)	slc18a2 (ENSCCRG00000013071)	kcnk18 (ENSCCRG00000013054)	sgms1a (ENSCCRG00000070887)	papss2a (ENSCCRG00000055982)	ptena (ENSCCRG00000040992)	ENSCCRG00000040984 #34	ENSCCRG00000040975 #26	SLC16A12 (ENSCCRG00000052901) #25	ENSCCRG00000040972 #26	pank1a (ENSCCRG00000072473) #24	ENSCCRG00000055882 #22	ENSCCRG00000054383 #23	ENSCCRG00000024493 #20	pcgf5a (ENSCCRG00000063244) #19	ppp1r3ca (ENSCCRG00000070930) #17	ENSCCRG00000055943 #15	ENSCCRG00000073651	FAM98A (ENSCCRG00000055260)	rasgrp3 (ENSCCRG00000026875)	LTBP1 (ENSCCRG00000075901)	ttc27 (ENSCCRG00000081226)	ENSCCRG00000058107	BIRC6 (ENSCCRG00000028417)	yipf4 (ENSCCRG00000028403)	exo1 (ENSCCRG00000028405)	ENSCCRG00000070343
Golden-line barbel	MODERN SPECIES	53	ENSSGRG00000009075	XPO1 (ENSSGRG00000008167)	SANBR (ENSSGRG00000008070)	pex13 (ENSSGRG00000008068)	PDZD8 (ENSSGRG00000008067)	slc18a2 (ENSSGRG00000008065)	kcnk18 (ENSSGRG00000008063)	sgms1a (ENSSGRG00000008062)	minpp1a (ENSSGRG00000008060)	papss2a (ENSSGRG00000004155)	ptena (ENSSGRG00000003648)	ENSSGRG00000003634 #34	SLC16A12 (ENSSGRG00000003605) #25	pank1a (ENSSGRG00000003496) #24	ENSSGRG00000003482	ENSSGRG00000003479 #22	ENSSGRG00000003475 #23	ENSSGRG00000003460 #20	pcgf5a (ENSSGRG00000003454) #19	ppp1r3ca (ENSSGRG00000003451) #17	ENSSGRG00000003449	ENSSGRG00000002271	ENSSGRG00000002191	rasgrp3 (ENSSGRG00000002176)	LTBP1 (ENSSGRG00000001085)	ttc27 (ENSSGRG00000000693)	BIRC6 (ENSSGRG00000000451)	exo1 (ENSSGRG00000000336)	ENSSGRG00000000310	ENSSGRG00000000303	slc8a1b (ENSSGRG00000000276)
Zebrafish	MODERN SPECIES	8	pex13 (ENSDARG00000071037)	PDZD8 (ENSDARG00000088699)	slc18a2 (ENSDARG00000015110)	kcnk18 (ENSDARG00000057049)	sgms1a (ENSDARG00000057053)	minpp1a (ENSDARG00000057058)	papss2a (ENSDARG00000071021)	ptena (ENSDARG00000071018)	ENSDARG00000043586	ifit14 (ENSDARG00000071012) #26	ifit15 (ENSDARG00000043584) #26	ENSDARG00000056976 #26	SLC16A12 (ENSDARG00000017773) #25	pank1a (ENSDARG00000008192) #24	zgc:65997 (ENSDARG00000043562)	ENSDARG00000056949 #22	ENSDARG00000071009 #23	ANKRD1 (ENSDARG00000075263) #20	pcgf5a (ENSDARG00000071007) #19	ENSDARG00000088493	ppp1r3ca (ENSDARG00000071005) #17	ENSDARG00000040162 #15	ENSDARG00000115129	ENSDARG00000112088	FAM98A (ENSDARG00000078391)	rasgrp3 (ENSDARG00000077864)	LTBP1 (ENSDARG00000056922)	ttc27 (ENSDARG00000007918)	BIRC6 (ENSDARG00000074166)	yipf4 (ENSDARG00000030957)	exo1 (ENSDARG00000056832)
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	212										ENSGT00390000018436.a.b	ENSGT00950000183181.A.a	ENSGT00950000182850.a.a.b	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.c #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00940000156410.h	ENSGT00390000008171	ENSGT00940000155793.a.b	ENSGT00530000063629.a	ENSGT00940000161321	ENSGT00940000154922.b.u.b.c	ENSGT00940000154922.b.u.a	ENSGT00940000165311.b
Atlantic herring	MODERN SPECIES	4	prkg1a (ENSCHAG00000002051)	nkx1.2la (ENSCHAG00000002007)	FAM53B (ENSCHAG00000001877)	eef1akmt2 (ENSCHAG00000001839)	abraxas2 (ENSCHAG00000001797)	zranb1b (ENSCHAG00000001261)	SMOC2 (ENSCHAG00000001012)	dact2 (ENSCHAG00000000937)	ablim1a (ENSCHAG00000000667)	ENSCHAG00000000507 #26	ENSCHAG00000000480 #26	ENSCHAG00000000450 #26	SLC16A12 (ENSCHAG00000000405) #25	pank1a (ENSCHAG00000017060) #24	zgc:65997 (ENSCHAG00000017038)	HTR7 (ENSCHAG00000017032) #22	ENSCHAG00000017019 #23	ANKRD1 (ENSCHAG00000016988) #20	pcgf5a (ENSCHAG00000016961) #19	HECTD2 (ENSCHAG00000016731) #18	ppp1r3ca (ENSCHAG00000016724) #17	ENSCHAG00000016714 #15	naa38 (ENSCHAG00000016677)	ENSCHAG00000016653	ENSCHAG00000016635	ENSCHAG00000015085	PLCE1 (ENSCHAG00000013684)	mrpl57 (ENSCHAG00000013647)	kcnh1a (ENSCHAG00000013567)	hhat (ENSCHAG00000013559)	CRIP3 (ENSCHAG00000013453)
Clupeiformes	ANCESTRAL SPECIES	136	ENSGT00940000158678	ENSGT00390000015792	ENSGT00390000018409.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.a.d #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808
Denticle herring	MODERN SPECIES	11	ptenb (ENSDCDG00000032985)	rnls (ENSDCDG00000032991)	rnls (ENSDCDG00000032993)	lipf (ENSDCDG00000032994) #32	ankrd22 (ENSDCDG00000032999) #37	STAMBPL1 (ENSDCDG00000033002) #36	ACTA2 (ENSDCDG00000033019) #35	ch25h (ENSDCDG00000033128) #33	ifit9 (ENSDCDG00000033129) #26	ifit9 (ENSDCDG00000033131) #26	ifit9 (ENSDCDG00000033132) #26	ifit9 (ENSDCDG00000033137) #26	ifit9 (ENSDCDG00000033154) #26	slc16a12b (ENSDCDG00000033168) #25	pank1b (ENSDCDG00000033170) #24	ENSDCDG00000033172 #22	ENSDCDG00000033176 #23	rpp30 (ENSDCDG00000033179) #21	ankrd1b (ENSDCDG00000033182) #20	HECTD2 (ENSDCDG00000033191) #18	ENSDCDG00000033274	ppp1r3cb (ENSDCDG00000033276) #17	MPP3 (ENSDCDG00000033280)	or63b2 (ENSDCDG00000033290)	rsph3 (ENSDCDG00000033291)	tut1 (ENSDCDG00000033292)	ENSDCDG00000033293	ENSDCDG00000033294	GRID1 (ENSDCDG00000033306)	ENSDCDG00000033329	WAPL (ENSDCDG00000000390)
Atlantic herring	MODERN SPECIES	15	atp6v0a1b (ENSCHAG00000013901)	NAGLU (ENSCHAG00000014384)	coasy (ENSCHAG00000014399)	ENSCHAG00000014453	rgrb (ENSCHAG00000014553)	lrit1b (ENSCHAG00000014568)	LRIT2 (ENSCHAG00000014594)	CDHR1 (ENSCHAG00000014606)	GHITM (ENSCHAG00000015374)	ifit9 (ENSCHAG00000015438) #26	ifit9 (ENSCHAG00000015447) #26	ENSCHAG00000015470 #26	ENSCHAG00000015478 #26	slc16a12b (ENSCHAG00000015558) #25	pank1b (ENSCHAG00000015570) #24	ENSCHAG00000015633 #22	ENSCHAG00000015733 #23	rpp30 (ENSCHAG00000015752) #21	ankrd1b (ENSCHAG00000015777) #20	pcgf5b (ENSCHAG00000015788) #19	HECTD2 (ENSCHAG00000015819) #18	ppp1r3cb (ENSCHAG00000015935) #17	MPP3 (ENSCHAG00000015952)	ENSCHAG00000016608	ENSCHAG00000017832	ENSCHAG00000017849	znf281b (ENSCHAG00000017862)	ENSCHAG00000017886	ENSCHAG00000017912	nmt1b (ENSCHAG00000018417)	PLCD3 (ENSCHAG00000018524)
Euteleosteomorpha	ANCESTRAL SPECIES	88	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833	ENSGT00940000157825.a	ENSGT00510000047107.A
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00940000156467	ENSGT00940000154556.a.b	ENSGT00940000156841.a.a	ENSGT00940000156327.l.o	ENSGT00940000157509.a.f	ENSGT00390000009597.c	ENSGT00390000015405	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab	ENSGT00390000004284.e	ENSGT00940000154445.a	ENSGT00390000007551	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00390000018525.a.a	ENSGT00390000002164.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00390000009877	ENSGT00390000008798.d.b	ENSGT00940000157851	ENSGT00940000157528	ENSGT00950000183079.B.j	ENSGT00730000111092	ENSGT00940000168294	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g	ENSGT00940000156695
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	763											ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a	ENSGT00390000002164.a.d	ENSGT00940000157912
Huchen	MODERN SPECIES	2570													cnrip1b (ENSHHUG00000052637)	cisd1 (ENSHHUG00000052636)	pank1a (ENSHHUG00000052625) #24	ENSHHUG00000052623 #22	ENSHHUG00000052618 #23	ENSHHUG00000052614 #23	sft2d1 (ENSHHUG00000052607)
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00390000002210.c.a	ENSGT00940000162838.g.b.c	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00940000157912.e.b	ENSGT00940000168294.b	ENSGT00940000156695.i	ENSGT00940000165188.d	ENSGT00390000010094.b.f	ENSGT00940000157084.e.b.c	ENSGT00940000158672.c.d	ENSGT00940000154784.D.a.a.b.a.b.d	ENSGT00950000183000.d.e	ENSGT00940000154805.b.g.e.a.u.b	ENSGT00390000008264.d.d	ENSGT00940000156008.h	ENSGT00510000048896
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000159704.j	ENSGT01080000257956	ENSGT01080000257692	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00940000157912.e.b	ENSGT00940000156543.d	ENSGT00390000008798.d.b.f.b	ENSGT00940000157528.h	ENSGT00950000183079.B.j.a.a.b	ENSGT00940000168294.b	ENSGT00940000156695.i
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000078194	ENSSSAG00000078551	slc18a3b (ENSSSAG00000099206)	rgrb (ENSSSAG00000078574)	lrit1b (ENSSSAG00000055242)	ENSSSAG00000078579	CDHR1 (ENSSSAG00000078583)	ENSSSAG00000040663	ENSSSAG00000040697	ENSSSAG00000105133	ENSSSAG00000100224	ENSSSAG00000053545	ENSSSAG00000119980	ENSSSAG00000078607	pank1a (ENSSSAG00000120413) #24	ENSSSAG00000117112 #22	ENSSSAG00000054281 #23	sft2a (ENSSSAG00000078682)	ENSSSAG00000108028	pde10a (ENSSSAG00000078742)	ENSSSAG00000111190	ENSSSAG00000089712	ENSSSAG00000096165	mcu (ENSSSAG00000011497)	micu1 (ENSSSAG00000115584)	ENSSSAG00000078881	ENSSSAG00000109005	SAP (ENSSSAG00000078843)	ENSSSAG00000084913	unc5b (ENSSSAG00000089554)	ENSSSAG00000115881
River trout	MODERN SPECIES	1	ENSSTUG00000048848	ENSSTUG00000048854	CHAT (ENSSTUG00000048884)	slc18a3b (ENSSTUG00000049127)	rgrb (ENSSTUG00000049130)	lrit1b (ENSSTUG00000049133)	LRIT2 (ENSSTUG00000049136)	CDHR1 (ENSSTUG00000049152)	c1d (ENSSTUG00000049247)	ENSSTUG00000049256	ENSSTUG00000049270	ENSSTUG00000049272	cisd1 (ENSSTUG00000049276)	MTLN (ENSSTUG00000049282)	pank1a (ENSSTUG00000049284) #24	ENSSTUG00000049293 #22	ENSSTUG00000049296 #23	sft2d1 (ENSSTUG00000049313)	PRR18 (ENSSTUG00000049323)	ENSSTUG00000049326	TBXT (ENSSTUG00000049327)	pde10a (ENSSTUG00000049366)	ENSSTUG00000049631	ENSSTUG00000049637	ENSSTUG00000049639	mcu (ENSSTUG00000049643)	nolc1 (ENSSTUG00000049652)	psap (ENSSTUG00000049665)	ENSSTUG00000049686	ENSSTUG00000049687	ENSSTUG00000049689
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000154632.sb	ENSGT00390000003349.w	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00390000002164.a.d	ENSGT00940000157912.e.a	ENSGT00940000168294.a.b	ENSGT00940000156695.i	ENSGT00940000156543.d	ENSGT00390000008798.d.b.f.a.a	ENSGT00940000157528.h
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000154632.sb	ENSGT00390000003349.w	ENSGT00940000159704.j	ENSGT00390000003652.c.a	ENSGT01060000248556.A.b.b.e	ENSGT00940000159449.c.b	ENSGT01090000260051.b.a.a.b.a.f	ENSGT00940000156033.f.a	ENSGT00940000159143.c.b	ENSGT00940000155509.b.a.j	ENSGT00940000156530.c.ab.b	ENSGT00390000004284.e.f	ENSGT00940000154445.a.c	ENSGT00390000007551	ENSGT00940000157373.l.f #24	ENSGT01010000222287.B.a.a.a.a.a.a.e #22	ENSGT00940000155989.e.e #23	ENSGT00390000018525.a.a.q	ENSGT00390000002164.a.d	ENSGT00940000157912.e.a	ENSGT00940000168294.a.b	ENSGT00940000156695.i
Chinook salmon	MODERN SPECIES	17	mgme1 (ENSOTSG00005041489)	ENSOTSG00005041490	EPHX1 (ENSOTSG00005028491)	ENSOTSG00005028504	slc18a3b (ENSOTSG00005028505)	rgrb (ENSOTSG00005028506)	lrit1b (ENSOTSG00005028507)	LRIT2 (ENSOTSG00005028508)	CDHR1 (ENSOTSG00005028509)	ENSOTSG00005028514	ENSOTSG00005028516	cnrip1b (ENSOTSG00005028518)	cisd1 (ENSOTSG00005028521)	MTLN (ENSOTSG00005028527)	pank1a (ENSOTSG00005028528) #24	ENSOTSG00005028529 #22	ENSOTSG00005028530 #23	sft2d1 (ENSOTSG00005028532)	ENSOTSG00005028533	TBXT (ENSOTSG00005028534)	pla2g12b (ENSOTSG00005028537)	ENSOTSG00005028540	ENSOTSG00005028548	ENSOTSG00005028550	capn2a (ENSOTSG00005028552)	ENSOTSG00005028553	MYH6 (ENSOTSG00005028635)	ZCCHC24 (ENSOTSG00005046784)	ENSOTSG00005046785	ENSOTSG00005046787	LPL (ENSOTSG00005046788)
Coho salmon	MODERN SPECIES	17	FLRT3 (ENSOKIG00005038623)	ENSOKIG00005038627	ENSOKIG00005038643	ENSOKIG00005038665	CHAT (ENSOKIG00005038684)	slc18a3b (ENSOKIG00005038802)	rgrb (ENSOKIG00005038824)	lrit1b (ENSOKIG00005038840)	LRIT2 (ENSOKIG00005038850)	CDHR1 (ENSOKIG00005038866)	ENSOKIG00005038887	ENSOKIG00005038964	cisd1 (ENSOKIG00005038989)	MTLN (ENSOKIG00005039075)	pank1a (ENSOKIG00005039091) #24	ENSOKIG00005039226 #22	ENSOKIG00005039441 #23	sft2d1 (ENSOKIG00005039562)	ENSOKIG00005039608	TBXT (ENSOKIG00005039617)	ENSOKIG00005040095	ENSOKIG00005040104	nolc1 (ENSOKIG00005040129)	psap (ENSOKIG00005040198)	ENSOKIG00005040309	ENSOKIG00005040316	ENSOKIG00005040349	ENSOKIG00005040361	ENSOKIG00005040403	IRF2BP2 (ENSOKIG00005040460)	ENSOKIG00005040489
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000017965	ENSOMYG00000071357	ENSOMYG00000017993	ENSOMYG00000018100	slc18a3b (ENSOMYG00000018130)	rgrb (ENSOMYG00000018138)	lrit1b (ENSOMYG00000018189)	ENSOMYG00000018195	CDHR1 (ENSOMYG00000018207)	ENSOMYG00000058811	canb1 (ENSOMYG00000057779)	ENSOMYG00000077301	ENSOMYG00000018319	ENSOMYG00000018370	pank1a (ENSOMYG00000018381) #24	ENSOMYG00000018408 #22	ENSOMYG00000076271 #23	sft2d1 (ENSOMYG00000018425)	ENSOMYG00000062284	ENSOMYG00000018454	PRR18 (ENSOMYG00000018461)	ENSOMYG00000069128	TBXT (ENSOMYG00000018465)	ENSOMYG00000048227	pde10a (ENSOMYG00000018486)	ENSOMYG00000053242	mcu (ENSOMYG00000066459)	ENSOMYG00000070380	ENSOMYG00000057290	ENSOMYG00000070002	nolc1 (ENSOMYG00000018753)
Salmoninae	ANCESTRAL SPECIES	325	ENSGT00940000165096.b.b.e	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00950000185438
Huchen	MODERN SPECIES	1311			tob1b (ENSHHUG00000052334)	rgrb (ENSHHUG00000052335)	lrit1b (ENSHHUG00000052338)	LRIT2 (ENSHHUG00000052339)	ENSHHUG00000052340	c1d (ENSHHUG00000052344)	dnaaf10 (ENSHHUG00000052347)	pno1 (ENSHHUG00000052351)	ENSHHUG00000052353	cnrip1b (ENSHHUG00000052366)	cisd1 (ENSHHUG00000052367)	pank1a (ENSHHUG00000052369) #24	zgc:65997 (ENSHHUG00000052374)	ENSHHUG00000052376 #22	ENSHHUG00000052378 #23	ENSHHUG00000052387
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00950000183091.A.b	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT00950000183079.B.j.a.a.a	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00960000188766
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT01070000254121.a	ENSGT00950000183079.B.j.b	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00950000183091.A.b	ENSGT00390000018052	ENSGT00940000156530.c.ab.a	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT01070000254121.a	ENSGT00950000183079.B.j.b	ENSGT00940000168294.a.a	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00390000010398.A
Coho salmon	MODERN SPECIES	12	ENSOKIG00005043443	bsk146 (ENSOKIG00005043410)	ENSOKIG00005043401	ENSOKIG00005042455	TOB1 (ENSOKIG00005042337)	rgrb (ENSOKIG00005042295)	lrit1b (ENSOKIG00005042272)	LRIT2 (ENSOKIG00005042253)	CDHR1 (ENSOKIG00005041956)	c1d (ENSOKIG00005041926)	pno1 (ENSOKIG00005041885)	dnaaf10 (ENSOKIG00005041789)	CISD1 (ENSOKIG00005041739)	pank1a (ENSOKIG00005041703) #24	zgc:65997 (ENSOKIG00005041663)	ENSOKIG00005041651 #22	ENSOKIG00005041578 #23	SFT2D1 (ENSOKIG00005041539)	pde10a (ENSOKIG00005038689)	ENSOKIG00005038572	pla2g12b (ENSOKIG00005038363)	OIT3 (ENSOKIG00005038042)	mcu (ENSOKIG00005038018)	ENSOKIG00005038008	ENSOKIG00005037986	ENSOKIG00005037981	micu1 (ENSOKIG00005037908)	ENSOKIG00005037869	mrps6 (ENSOKIG00005037855)	SLC29A1 (ENSOKIG00005037838)	psap (ENSOKIG00005037692)
Chinook salmon	MODERN SPECIES	16	hs3st3l (ENSOTSG00005005009)	ENSOTSG00005005008	dhrs7cb (ENSOTSG00005005003)	ENSOTSG00005004991	ENSOTSG00005004986	bsk146 (ENSOTSG00005004984)	c1d (ENSOTSG00005004971)	dnaaf10 (ENSOTSG00005004969)	PNO1 (ENSOTSG00005004967)	ENSOTSG00005004965	CNRIP1 (ENSOTSG00005004964)	ENSOTSG00005004962	ENSOTSG00005004961	pank1a (ENSOTSG00005004960) #24	zgc:65997 (ENSOTSG00005004959)	ENSOTSG00005004957 #22	ly6pge (ENSOTSG00005004954)	ENSOTSG00005004951	psap (ENSOTSG00005004901)	SLC29A1 (ENSOTSG00005004734)	mrps6 (ENSOTSG00005004723)	ENSOTSG00005004721	ENSOTSG00005004717	rab10 (ENSOTSG00005004713)	ENSOTSG00005004711	ENSOTSG00005004710	ntpcr (ENSOTSG00005004707)	ENSOTSG00005004703	KLHDC3 (ENSOTSG00005004701)	ENSOTSG00005004685	ENSOTSG00005004683
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000012389	ENSOMYG00000055609	rgrb (ENSOMYG00000012374)	LRIT1 (ENSOMYG00000012359)	ENSOMYG00000012346	ENSOMYG00000060629	CDHR1 (ENSOMYG00000012281)	ENSOMYG00000012244	pno1 (ENSOMYG00000012229)	ENSOMYG00000012215	ENSOMYG00000055933	ENSOMYG00000061758	ENSOMYG00000053632	ENSOMYG00000012181	pank1a (ENSOMYG00000012168) #24	ENSOMYG00000012162 #22	ENSOMYG00000012149 #23	ENSOMYG00000062569 #23	sft2d1 (ENSOMYG00000051704)	PRR18 (ENSOMYG00000071091)	pde10a (ENSOMYG00000056489)	ENSOMYG00000050336	pla2g12b (ENSOMYG00000008035)	OIT3 (ENSOMYG00000008101)	ENSOMYG00000071164	mcu (ENSOMYG00000008119)	ENSOMYG00000067585	micu1 (ENSOMYG00000056486)	nolc1 (ENSOMYG00000008483)	mrps6 (ENSOMYG00000008501)	ENSOMYG00000008527
Salmo	ANCESTRAL SPECIES	3	ENSGT00940000165096.b.b.e	ENSGT00940000163867.m	ENSGT00940000154208.c.b.b	ENSGT01090000260051.b.a.a.b.a.e	ENSGT00940000156033.f.b	ENSGT00940000159143.c.a	ENSGT00940000155509.b.a.i	ENSGT00390000015405.pb	ENSGT00390000018052	ENSGT00950000183091.A.b	ENSGT00390000004284.e.e	ENSGT00390000014320.c.b.d	ENSGT00940000154445.a.d	ENSGT00940000157373.l.e #24	ENSGT00940000165449.i	ENSGT01010000222287.B.a.a.a.a.a.a.f #22	ENSGT00940000155989.e.f #23	ENSGT00390000018525.a.a.r	ENSGT00390000002164.a.c	ENSGT00940000156543.c	ENSGT00390000009877	ENSGT00390000008798.d.b.e	ENSGT00940000157851	ENSGT00940000157528.g	ENSGT00950000183079.B.j.a.a.a	ENSGT00730000111092.g	ENSGT00390000014606	ENSGT00950000182898.a.a.a.a.b.g.d	ENSGT00940000156695.j	ENSGT00950000182898.a.a.b	ENSGT00960000188766
River trout	MODERN SPECIES	11	ENSSTUG00000001439	TOB1 (ENSSTUG00000001327)	rgrb (ENSSTUG00000001319)	lrit1b (ENSSTUG00000001310)	LRIT2 (ENSSTUG00000001300)	CDHR1 (ENSSTUG00000001153)	c1d (ENSSTUG00000001125)	pno1 (ENSSTUG00000001113)	dnaaf10 (ENSSTUG00000001082)	cnrip1b (ENSSTUG00000001070)	ADK (ENSSTUG00000001067)	cisd1 (ENSSTUG00000001060)	ENSSTUG00000001057	pank1a (ENSSTUG00000001033) #24	zgc:65997 (ENSSTUG00000001022)	ENSSTUG00000001018 #22	ENSSTUG00000000931 #23	sft2d1 (ENSSTUG00000000902)	PRR18 (ENSSTUG00000000898)	pde10a (ENSSTUG00000000703)	ENSSTUG00000000681	ENSSTUG00000000673	pla2g12b (ENSSTUG00000000603)	OIT3 (ENSSTUG00000000571)	mcu (ENSSTUG00000000554)	micu1 (ENSSTUG00000000284)	nolc1 (ENSSTUG00000000244)	mrps6 (ENSSTUG00000000238)	SLC29A1 (ENSSTUG00000000175)	psap (ENSSTUG00000000150)	SLC29A3 (ENSSTUG00000000126)
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000055677	ENSSSAG00000092692	rgrb (ENSSSAG00000120288)	LRIT1 (ENSSSAG00000105330)	ENSSSAG00000092867	CDHR1 (ENSSSAG00000054429)	ENSSSAG00000054384	pno1 (ENSSSAG00000054375)	ENSSSAG00000054332	ENSSSAG00000121949	ENSSSAG00000089836	ENSSSAG00000102484	cisd1 (ENSSSAG00000054306)	pank1a (ENSSSAG00000054291) #24	zgc:65997 (ENSSSAG00000054288)	ENSSSAG00000085294 #22	ENSSSAG00000078645 #23	sft2d1 (ENSSSAG00000054276)	ENSSSAG00000040706	ENSSSAG00000086110	pde10a (ENSSSAG00000118189)	ENSSSAG00000087765	pla2g12b (ENSSSAG00000040768)	OIT3 (ENSSSAG00000054635)	ENSSSAG00000117417	mcu (ENSSSAG00000120992)	ENSSSAG00000088633	ENSSSAG00000082988	micu1 (ENSSSAG00000041313)	mrps6 (ENSSSAG00000100405)	nolc1 (ENSSSAG00000041502)
Northern pike	MODERN SPECIES	4	papolg (ENSELUG00000014497)	ACTR2 (ENSELUG00000014576)	SPRED2 (ENSELUG00000014634)	ENSELUG00000031773	ENSELUG00000014739	ENSELUG00000014766	ENSELUG00000014800	C1D (ENSELUG00000014823)	pno1 (ENSELUG00000014887)	dnaaf10 (ENSELUG00000015074)	cnrip1b (ENSELUG00000015120)	cisd1 (ENSELUG00000015140)	ENSELUG00000015188	pank1a (ENSELUG00000015238) #24	zgc:65997 (ENSELUG00000015263)	ENSELUG00000015297 #22	ENSELUG00000015384 #23	sft2d1 (ENSELUG00000015430)	PRR18 (ENSELUG00000015440)	TBXT (ENSELUG00000015495)	pde10a (ENSELUG00000015533)	ENSELUG00000015550	pla2g12b (ENSELUG00000015559)	OIT3 (ENSELUG00000015597)	mcu (ENSELUG00000015640)	micu1 (ENSELUG00000015709)	ENSELUG00000015745	ENSELUG00000030324	ENSELUG00000015865	ENSELUG00000015782	ENSELUG00000029047
Acanthomorphata	ANCESTRAL SPECIES	93	ENSGT00940000172797	ENSGT00940000153954	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000018613.a	ENSGT00950000183148.b.b	ENSGT00940000166409	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000004582	ENSGT01050000244965.a.b	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00650000094737	ENSGT00940000155061.a.b.k.a	ENSGT00940000164992	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a	ENSGT00940000170913
Euacanthomorphacea	ANCESTRAL SPECIES	57	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00390000007701	ENSGT00940000165449	ENSGT00940000157373.l #24	ENSGT00940000156169.a.b #25	ENSGT00940000161693	ENSGT00940000178131	ENSGT00390000016757	ENSGT00950000183154.a.b	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00730000111005	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b
Pinecone sodierfish	MODERN SPECIES	6	vip (ENSMMDG00005021881)	fbxo5 (ENSMMDG00005021884)	MTRF1L (ENSMMDG00005021887)	desi2 (ENSMMDG00005021891)	cox20 (ENSMMDG00005021894)	lhb (ENSMMDG00005021896)	ENSMMDG00005021898	ENSMMDG00005021900	lhb (ENSMMDG00005021902)	ENSMMDG00005021903	ENSMMDG00005021905	ENSMMDG00005021906	ENSMMDG00005021907	ENSMMDG00005021910	ARFGEF3 (ENSMMDG00005021925)	ENSMMDG00005021957 #22	ENSMMDG00005022010 #23	ENSMMDG00005022015	ENSMMDG00005022018	ENSMMDG00005022021	ENSMMDG00005022024	LYZ (ENSMMDG00005022036)	cdh11 (ENSMMDG00005022040)	chrna1 (ENSMMDG00005022045)	ENSMMDG00005022054	ENSMMDG00005022059	ENSMMDG00005022062	ENSMMDG00005022066	GPR155 (ENSMMDG00005022076)	tmem41ab (ENSMMDG00005022090)	cdh5 (ENSMMDG00005001225)
Percomorphaceae	ANCESTRAL SPECIES	45										ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b	ENSGT00980000202755	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000156754.a.b.b	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pomacentridae	ANCESTRAL SPECIES	107	ENSGT00940000168097.a.f	ENSGT00510000046499.e.b.a.b	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000154484.B.b	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Bicolor damselfish	MODERN SPECIES	1278								ENSSPAG00000012712	SLC22A7 (ENSSPAG00000013040)	ENSSPAG00000013054	ENSSPAG00000013071	cox20 (ENSSPAG00000013137)	lhb (ENSSPAG00000013179)	ENSSPAG00000013569	ARFGEF3 (ENSSPAG00000013650)	HTR7 (ENSSPAG00000013746) #22	ENSSPAG00000013763
Pomacentridae_A	ANCESTRAL SPECIES	70	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a.b	ENSGT00940000154922.b.u.a.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000154484.B.b	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10
Amphiprion	ANCESTRAL SPECIES	285									ENSGT00940000154922.b.u.a.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22
Clown anemonefish	MODERN SPECIES	2448											ENSAOCG00000023175	cox20 (ENSAOCG00000023163)	lhb (ENSAOCG00000001923)	ENSAOCG00000023127	ARFGEF3 (ENSAOCG00000023055)	HTR7 (ENSAOCG00000001660) #22
Cichlidae	ANCESTRAL SPECIES	38	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b	ENSGT00940000164766	ENSGT00610000086518.a.hb.a	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
Pseudocrenilabrinae	ANCESTRAL SPECIES	32	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.b.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.a	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000166295.b.b.b.a.b	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00940000168097.a.d	ENSGT00510000046499.f.b	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000155921 #10	ENSGT00610000086518.a.ib	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT00940000166295.b.b.b.a.b	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b	ENSGT00510000046499.f.a.b.a	ENSGT00940000168097.a.c	ENSGT00940000156754.a.a	ENSGT00610000086460
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.a	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT01090000260783	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a.f.b	ENSGT00940000166295.b.b.b.a.a	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b	ENSGT00510000046499.f.a.b.a
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00610000086518.a.hb.b.a.a.a.a	ENSGT00940000164766	ENSGT00610000086518.a.hb.b.a.a.b	ENSGT00610000086518.a.hb.b.a.b.a	ENSGT00610000086518.a.hb.b.a.a.a.b	ENSGT00940000156410.h	ENSGT00800000124060.A.b #7	ENSGT00610000086518.a.hb.b.b	ENSGT00940000157037.b.b.b	ENSGT00940000154372.b #15	ENSGT00940000155648.B.b #17	ENSGT00940000157750 #18	ENSGT00940000155896.k #19	ENSGT00940000153956.a.b #20	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT01030000235229.c	ENSGT01090000260783.a	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a.f.b	ENSGT00940000166295.a	ENSGT00940000166295.b.b.b.a.a	ENSGT00390000003874.a.b	ENSGT00940000176046	ENSGT00940000164632.b.a	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499.f.a.a.a	ENSGT00510000046499.f.a.b.b
Eastern happy	MODERN SPECIES	4	ENSACLG00000001660	ENSACLG00000001640	ENSACLG00000001616	ENSACLG00000001607	cyp26c1 (ENSACLG00000001593) #7	ENSACLG00000001588	ENSACLG00000001575	ENSACLG00000001573	ENSACLG00000001542 #15	ppp1r3ca (ENSACLG00000001535) #17	HECTD2 (ENSACLG00000001444) #18	ENSACLG00000001434	pcgf5a (ENSACLG00000001426) #19	ANKRD1 (ENSACLG00000001411) #20	ARFGEF3 (ENSACLG00000001303)	HTR7 (ENSACLG00000001146) #22	ENSACLG00000001051 #23	ENSACLG00000001021	ENSACLG00000000976	ENSACLG00000000972	ENSACLG00000000958	ENSACLG00000000943	ENSACLG00000000936	ENSACLG00000000912	ENSACLG00000000887	ENSACLG00000000880	ENSACLG00000000874	ENSACLG00000000849	pdxkb (ENSACLG00000000813)	ENSACLG00000000793	ENSACLG00000000625
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005004923	yipf4 (ENSMZEG00005004927)	exo1 (ENSMZEG00005004947)	ENSMZEG00005005007	ENSMZEG00005005117	PDZD8 (ENSMZEG00005005129)	slc18a2 (ENSMZEG00005005147)	kcnk18 (ENSMZEG00005005191)	ENSMZEG00005005227	vax1 (ENSMZEG00005005238)	atp6v1ba (ENSMZEG00005005256)	ENSMZEG00005005291	shtn1 (ENSMZEG00005005310)	eno4 (ENSMZEG00005005363)	ARFGEF3 (ENSMZEG00005005973)	HTR7 (ENSMZEG00005027241) #22	ENSMZEG00005027243 #23	ENSMZEG00005027245	ENSMZEG00005027247	ENSMZEG00005027248	ENSMZEG00005027250	ENSMZEG00005027251	ENSMZEG00005027252	ENSMZEG00005027253	ENSMZEG00005027255	ENSMZEG00005027256	ENSMZEG00005027257	pdxkb (ENSMZEG00005027258)	ENSMZEG00005027259	ENSMZEG00005027260	ITSN1 (ENSMZEG00005027261)
P. nyererei	MODERN SPECIES	428	adob (ENSPNYG00000020377)	EGR2 (ENSPNYG00000020385)	ENSPNYG00000020394	ENSPNYG00000020410	ENSPNYG00000020420	ENSPNYG00000020427	cyp26c1 (ENSPNYG00000020455) #7	ENSPNYG00000000809	ENSPNYG00000000829	ENSPNYG00000000848 #15	ppp1r3ca (ENSPNYG00000000864) #17	HECTD2 (ENSPNYG00000000878) #18	pcgf5a (ENSPNYG00000001011) #19	ANKRD1 (ENSPNYG00000001062) #20	ARFGEF3 (ENSPNYG00000001081)	HTR7 (ENSPNYG00000001194) #22	ENSPNYG00000001243 #23
Burton s mouthbrooder	MODERN SPECIES	485	EGR2 (ENSHBUG00000004545)	kif11 (ENSHBUG00000004589) #10	ENSHBUG00000004611	slc22a15 (ENSHBUG00000004621)	ENSHBUG00000004636	ENSHBUG00000004675	cyp26c1 (ENSHBUG00000004702) #7	ENSHBUG00000004720	ENSHBUG00000004749	ENSHBUG00000004763 #15	ppp1r3ca (ENSHBUG00000004773) #17	HECTD2 (ENSHBUG00000004856) #18	pcgf5a (ENSHBUG00000004878) #19	ANKRD1 (ENSHBUG00000004891) #20	ARFGEF3 (ENSHBUG00000005073)	HTR7 (ENSHBUG00000005134) #22	ENSHBUG00000005161 #23	ENSHBUG00000005171
Lyretail cichlid	MODERN SPECIES	295	SLC30A6 (ENSNBRG00000007071)	adob (ENSNBRG00000007160)	EGR2 (ENSNBRG00000007168)	ENSNBRG00000007172	ENSNBRG00000007184	slc22a15 (ENSNBRG00000007193)	ENSNBRG00000007231	ENSNBRG00000007243	ENSNBRG00000007261	cyp26c1 (ENSNBRG00000007301) #7	ENSNBRG00000007423	ppp1r3ca (ENSNBRG00000007518) #17	HECTD2 (ENSNBRG00000007522) #18	ANKRD1 (ENSNBRG00000007567) #20	ARFGEF3 (ENSNBRG00000007615)	HTR7 (ENSNBRG00000007713) #22	ENSNBRG00000007739	ENSNBRG00000007757	ENSNBRG00000007777	ENSNBRG00000007789	ENSNBRG00000007799	ENSNBRG00000007818	pdxkb (ENSNBRG00000007837)	ITSN1 (ENSNBRG00000007888)	cryzl1 (ENSNBRG00000008039)	setd4 (ENSNBRG00000008080)	cbr1 (ENSNBRG00000008121)	ENSNBRG00000008162	ENSNBRG00000008193	ENSNBRG00000008210	gfra1a (ENSNBRG00000008221)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000037710	ENSONIG00000027577	cyp26c1 (ENSONIG00000015474) #7	ENSONIG00000038943	ENSONIG00000032275	ENSONIG00000021009	ENSONIG00000015476 #15	ENSONIG00000034219	ppp1r3c (ENSONIG00000015478) #17	HECTD2 (ENSONIG00000015479) #18	pcgf5a (ENSONIG00000015483) #19	ANKRD1 (ENSONIG00000015484) #20	ENSONIG00000031517	ENSONIG00000042548	ARFGEF3 (ENSONIG00000015488)	HTR7 (ENSONIG00000015494) #22	ENSONIG00000038786 #23	ENSONIG00000034052	ENSONIG00000028015	ENSONIG00000035641	ENSONIG00000030310	ENSONIG00000034645	rps27a (ENSONIG00000016075)	bmpr1aa (ENSONIG00000016072)	ldb3a (ENSONIG00000007106)	OPN4 (ENSONIG00000007115)	prorsd1 (ENSONIG00000007119)	ENSONIG00000037381
Midas cichlid	MODERN SPECIES	357	ENSACIG00000012020	slc22a15 (ENSACIG00000011991)	ENSACIG00000011981	ENSACIG00000011975	ENSACIG00000011961	ENSACIG00000011933	cyp26c1 (ENSACIG00000011918) #7	ENSACIG00000011907	ENSACIG00000011895 #15	ppp1r3ca (ENSACIG00000011877) #17	HECTD2 (ENSACIG00000011856) #18	pcgf5a (ENSACIG00000011765) #19	ANKRD1 (ENSACIG00000011747) #20	ENSACIG00000011733	ARFGEF3 (ENSACIG00000011632)	HTR7 (ENSACIG00000011619) #22	ENSACIG00000011609	ENSACIG00000011496 #23
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000156754.a.b.a	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00940000160678.b
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155560.k.c	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00940000164014.a.b.b.a.a.a.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00390000007701	ENSGT00940000165449	ENSGT00940000157373.l #24
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000182031	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00940000164014.a.b.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.a.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a	ENSGT00990000207825	ENSGT00390000007701	ENSGT00940000165449
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000012973	ENSOJAG00000012991	ENSOJAG00000013238	ENSOJAG00000015135	PRKCE (ENSOJAG00000015182)	epas1b (ENSOJAG00000015549)	ENSOJAG00000016506	lhb (ENSOJAG00000016529)	ENSOJAG00000016543	ENSOJAG00000016562	ENSOJAG00000016584	ENSOJAG00000016588	ENSOJAG00000016603	ENSOJAG00000016631	ARFGEF3 (ENSOJAG00000016652)	HTR7 (ENSOJAG00000017252) #22	ENSOJAG00000017262 #23	ANKRD1 (ENSOJAG00000017280) #20	pcgf5a (ENSOJAG00000017294) #19	HECTD2 (ENSOJAG00000017317) #18	ppp1r3ca (ENSOJAG00000017566) #17	ENSOJAG00000006017	FGFBP3 (ENSOJAG00000006062) #15	ENSOJAG00000006088	slc8a1b (ENSOJAG00000006243)	ENSOJAG00000007234	mrps5 (ENSOJAG00000007323)	malb (ENSOJAG00000007351)	ENSOJAG00000007360	zgc:65997 (ENSOJAG00000007479)	pank1a (ENSOJAG00000007501) #24
Indian medaka	MODERN SPECIES	27	tspan14 (ENSOMEG00000017924)	EML4 (ENSOMEG00000017876)	ENSOMEG00000017755	ENSOMEG00000017741	id4 (ENSOMEG00000017701)	cep76 (ENSOMEG00000017644)	ENSOMEG00000017540	ENSOMEG00000017459	ENSOMEG00000017366	PRKCE (ENSOMEG00000017287)	epas1b (ENSOMEG00000017236)	lhb (ENSOMEG00000017138)	ENSOMEG00000017118	ENSOMEG00000017100	ARFGEF3 (ENSOMEG00000016473)	HTR7 (ENSOMEG00000014316) #22	ENSOMEG00000014262 #23	ANKRD1 (ENSOMEG00000014118) #20	pcgf5a (ENSOMEG00000014083) #19	HECTD2 (ENSOMEG00000014030) #18	ppp1r3ca (ENSOMEG00000013931) #17	akap1b (ENSOMEG00000013912)	NLRX1 (ENSOMEG00000013878)	cuedc1b (ENSOMEG00000013817)	ENSOMEG00000013787	ENSOMEG00000013760	slc8a1b (ENSOMEG00000013705)	mrps5 (ENSOMEG00000013610)	malb (ENSOMEG00000000767)	ENSOMEG00000013521	ENSOMEG00000013512
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000157303.e	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000156754.a.a	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000164014.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.a.a.a.b.a	ENSGT00940000164014.a.b.b.a.a.b	ENSGT00940000164014.a.b.b.a.a.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT01000000214725.D	ENSGT00940000157037.b.b.b	ENSGT00940000155129.A	ENSGT00390000001878	ENSGT00940000154987.i.b.a.a	ENSGT00940000154987.i.a.a	ENSGT00940000154987.i.a.b	ENSGT00390000007701	ENSGT00940000165449
Chinese medaka	MODERN SPECIES	1079					ENSOSIG00000000853	GFRA1 (ENSOSIG00000000818)	ENSOSIG00000000789	ENSOSIG00000017615	ENSOSIG00000017556	epas1b (ENSOSIG00000017440)	ENSOSIG00000017417	lhb (ENSOSIG00000017414)	ENSOSIG00000017410	ENSOSIG00000017407	ARFGEF3 (ENSOSIG00000017315)	HTR7 (ENSOSIG00000017309) #22	ENSOSIG00000017308 #23	ANKRD1 (ENSOSIG00000017307) #20	pcgf5a (ENSOSIG00000017306) #19	HECTD2 (ENSOSIG00000017269) #18	ppp1r3ca (ENSOSIG00000017263) #17	ENSOSIG00000017262 #15	ENSOSIG00000017260	ENSOSIG00000017258	slc8a1b (ENSOSIG00000017234)	ENSOSIG00000017228	mrps5 (ENSOSIG00000017117)	malb (ENSOSIG00000017106)	ENSOSIG00000017102	ENSOSIG00000017101	pank1a (ENSOSIG00000017096) #24
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000023819	ENSORLG00000003469	ENSORLG00000003498	PRKCE (ENSORLG00000003528)	epas1b (ENSORLG00000003535)	ENSORLG00000029129	ENSORLG00000023742	ENSORLG00000003545	lhb (ENSORLG00000003553)	ENSORLG00000024300	ENSORLG00000028561	ENSORLG00000028163	ENSORLG00000029530	ENSORLG00000022300	ARFGEF3 (ENSORLG00000003579)	HTR7 (ENSORLG00000003592) #22	ENSORLG00000003677 #23	ANKRD1 (ENSORLG00000003705) #20	pcgf5a (ENSORLG00000003721) #19	HECTD2 (ENSORLG00000003746) #18	ppp1r3ca (ENSORLG00000025909) #17	ENSORLG00000027800 #15	ENSORLG00000018937	ENSORLG00000018929	slc8a1b (ENSORLG00000003757)	mrps5 (ENSORLG00000003768)	malb (ENSORLG00000022246)	ENSORLG00000003791	ENSORLG00000029066	nphp1 (ENSORLG00000003818)	zgc:65997 (ENSORLG00000003827)
Cyprinodontiformes	ANCESTRAL SPECIES	61											ENSGT00990000205827	ENSGT00940000164014.a.b.b.b	ENSGT00980000202755	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01030000234575.c.a.a.a.a.a.b.b.b.a	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Cyprinodontoidei	ANCESTRAL SPECIES	40										ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT01030000234575.c.a.a.a.a.a.b.b.b.a	ENSGT01100000264800	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f
Poeciliinae	ANCESTRAL SPECIES	36										ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb	ENSGT00940000164766	ENSGT00610000086518.a.bb.b	ENSGT00610000086518.a.bb.a	ENSGT00940000155921.h #10	ENSGT00940000158394.f
Poecilia	ANCESTRAL SPECIES	80								ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a.a.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.b.b	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.a	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb	ENSGT00940000164766	ENSGT00610000086518.a.bb.a.b	ENSGT00610000086518.a.bb.a.a	ENSGT00940000155921.h #10
NAME_6	ANCESTRAL SPECIES	180							ENSGT00990000205827	ENSGT00940000164014.a.b.b.b.a.a	ENSGT00940000164014.a.b.b.b.a.b.b.a.a.b	ENSGT00980000202755	ENSGT00940000164014.a.b.b.b.a.b.a.a.a.a.a	ENSGT00940000164014.a.b.b.b.b	ENSGT00940000164014.a.b.b.b.a.b.a.a.b	ENSGT00740000116878	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.b.b.a.a	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a.cb.c	ENSGT00940000164766	ENSGT00610000086518.a.bb.a.b	ENSGT00610000086518.a.bb.a.a.a	ENSGT00940000155921.h #10
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2533															ARFGEF3 (ENSPLAG00000014599)	ENSPLAG00000014586 #22
Sailfin molly	MODERN SPECIES	2098																HTR7 (ENSPLAG00000005759) #22
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	466	ENSPFOG00000021839	ENSPFOG00000022650	ENSPFOG00000017058	ENSPFOG00000023928	ENSPFOG00000017060	ENSPFOG00000017061	ENSPFOG00000017062	ENSPFOG00000023892	ENSPFOG00000023777	ENSPFOG00000017066	ENSPFOG00000017067	ENSPFOG00000017070	ENSPFOG00000023576	ENSPFOG00000022429	ARFGEF3 (ENSPFOG00000017133)	ENSPFOG00000017356 #22	HTR7 (ENSPFOG00000017362) #22	ENSPFOG00000017376 #23	ANKRD1 (ENSPFOG00000017432) #20	pcgf5a (ENSPFOG00000023300) #19	HECTD2 (ENSPFOG00000017442) #18	ppp1r3ca (ENSPFOG00000017549) #17	ENSPFOG00000020790	FGFBP3 (ENSPFOG00000017551) #15	ENSPFOG00000017556	ENSPFOG00000022996	ENSPFOG00000024248	cyp26c1 (ENSPFOG00000017561) #7	ENSPFOG00000017590	ENSPFOG00000017622	ENSPFOG00000023615
Amazon molly	MODERN SPECIES	466	ENSPFOG00000022650	ENSPFOG00000017058	ENSPFOG00000023928	ENSPFOG00000017060	ENSPFOG00000017061	ENSPFOG00000017062	ENSPFOG00000023892	ENSPFOG00000023777	ENSPFOG00000017066	ENSPFOG00000017067	ENSPFOG00000017070	ENSPFOG00000023576	ENSPFOG00000022429	ARFGEF3 (ENSPFOG00000017133)	ENSPFOG00000017356 #22	HTR7 (ENSPFOG00000017362) #22	ENSPFOG00000017376 #23	ANKRD1 (ENSPFOG00000017432) #20	pcgf5a (ENSPFOG00000023300) #19	HECTD2 (ENSPFOG00000017442) #18	ppp1r3ca (ENSPFOG00000017549) #17	ENSPFOG00000020790	FGFBP3 (ENSPFOG00000017551) #15	ENSPFOG00000017556	ENSPFOG00000022996	ENSPFOG00000024248	cyp26c1 (ENSPFOG00000017561) #7	ENSPFOG00000017590	ENSPFOG00000017622	ENSPFOG00000023615	slc22a15 (ENSPFOG00000017646)
Guppy	MODERN SPECIES	445	SMOC2 (ENSPREG00000001325)	eif3s6ip (ENSPREG00000001257)	vsir (ENSPREG00000001244)	ENSPREG00000001143	PLPP4 (ENSPREG00000001099)	ENSPREG00000001079	ENSPREG00000001066	ENSPREG00000001045	ENSPREG00000001023	ENSPREG00000001017	ENSPREG00000000996	ENSPREG00000000991	ENSPREG00000000977	ENSPREG00000000934	ARFGEF3 (ENSPREG00000000905)	HTR7 (ENSPREG00000000878) #22	ENSPREG00000000830 #23	ANKRD1 (ENSPREG00000000817) #20	ENSPREG00000000795	pcgf5a (ENSPREG00000000743) #19	HECTD2 (ENSPREG00000000617) #18	ppp1r3ca (ENSPREG00000023195) #17	ENSPREG00000023194	FGFBP3 (ENSPREG00000023191) #15	ENSPREG00000023189	mrps6 (ENSPREG00000023188)	ENSPREG00000023185	micu1 (ENSPREG00000023180)	mcu (ENSPREG00000023178)	OIT3 (ENSPREG00000023173)	pla2g12b (ENSPREG00000023171)
Platyfish	MODERN SPECIES	14	PLPP4 (ENSXMAG00000004823)	ENSXMAG00000004826	ENSXMAG00000004951	ENSXMAG00000024205	ENSXMAG00000023138	ENSXMAG00000028232	ENSXMAG00000026100	ENSXMAG00000029940	ENSXMAG00000022677	ENSXMAG00000004947	ENSXMAG00000024538	ENSXMAG00000022272	ENSXMAG00000026696	ENSXMAG00000028863	ENSXMAG00000004837	HTR7 (ENSXMAG00000021872) #22	ENSXMAG00000004864 #23	ANKRD1 (ENSXMAG00000004868) #20	pcgf5a (ENSXMAG00000004878) #19	ENSXMAG00000027778	HECTD2 (ENSXMAG00000012825) #18	ppp1r3ca (ENSXMAG00000004886) #17	ENSXMAG00000025679	FGFBP3 (ENSXMAG00000004887) #15	ENSXMAG00000022141	cyp26c1 (ENSXMAG00000004889) #7	ENSXMAG00000015191	ENSXMAG00000019903	slc22a15 (ENSXMAG00000006658)	ENSXMAG00000028375	ENSXMAG00000023954
NAME_4	ANCESTRAL SPECIES	373															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17
Sheepshead minnow	MODERN SPECIES	177											ENSCVAG00000019282	ENSCVAG00000019311	ENSCVAG00000019346	ENSCVAG00000019351	ARFGEF3 (ENSCVAG00000019368)	HTR7 (ENSCVAG00000019388) #22	ENSCVAG00000019643 #23	ENSCVAG00000019653	pcgf5a (ENSCVAG00000019667) #19	HECTD2 (ENSCVAG00000019735) #18	ppp1r3ca (ENSCVAG00000019746) #17	ENSCVAG00000019764	ENSCVAG00000019767	ENSCVAG00000019788	ENSCVAG00000019837	ENSCVAG00000019966	arg1 (ENSCVAG00000020008)	p4ha1a (ENSCVAG00000020081)	RAB40B (ENSCVAG00000020127)	cox11 (ENSCVAG00000020133)	CBX2 (ENSCVAG00000020137)
Mummichog	MODERN SPECIES	704															ARFGEF3 (ENSFHEG00000012245)	HTR7 (ENSFHEG00000012218) #22
Aplocheiloidei	ANCESTRAL SPECIES	435															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22
Mangrove rivulus	MODERN SPECIES	202	abhd12 (ENSKMAG00000002706)	pygb (ENSKMAG00000002733)	ENSKMAG00000002810	ENSKMAG00000002814	ENSKMAG00000002834	elovl6l (ENSKMAG00000002845)	ENSKMAG00000002893	nfkb2 (ENSKMAG00000002951)	glud1a (ENSKMAG00000003020)	shld2 (ENSKMAG00000003068)	sncga (ENSKMAG00000003103)	ENSKMAG00000003119	ENSKMAG00000003133	rps27a (ENSKMAG00000003156)	ARFGEF3 (ENSKMAG00000003204)	HTR7 (ENSKMAG00000003418) #22
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000003256	ENSGT00940000160761	ENSGT00940000164045	ENSGT00390000001216	ENSGT00940000153766.A	ENSGT00390000008403	ENSGT00730000112471	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00390000011034	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.a.a	ENSGT00940000153566.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c
Tetraodon	MODERN SPECIES	9	mea1 (ENSTNIG00000013378)	LRRC73 (ENSTNIG00000013379)	DLK2 (ENSTNIG00000013380)	ENSTNIG00000013381	dnph1 (ENSTNIG00000013382)	yipf3 (ENSTNIG00000013383)	ncoa4 (ENSTNIG00000013384)	ENSTNIG00000013385	prph2b (ENSTNIG00000013386)	UBR2 (ENSTNIG00000013387)	prkn (ENSTNIG00000013388)	KCNG3 (ENSTNIG00000013389)	tspan14 (ENSTNIG00000013390)	EML4 (ENSTNIG00000013391)	ARFGEF3 (ENSTNIG00000013392)	HTR7 (ENSTNIG00000013393) #22	ENSTNIG00000013394 #23	ENSTNIG00000013395	ENSTNIG00000013396	ENSTNIG00000013397	ENSTNIG00000013398	ENSTNIG00000013399	ncapd3 (ENSTNIG00000013400)	RIN2 (ENSTNIG00000013401)	SLC24A3 (ENSTNIG00000013402)	CCDC85A (ENSTNIG00000013403)	vrk2 (ENSTNIG00000013404)	fancl (ENSTNIG00000013405)	ENSTNIG00000005029	ENSTNIG00000004033	RIMS1 (ENSTNIG00000009888)
Fugu	MODERN SPECIES	16	LRRC73 (ENSTRUG00000003016)	ENSTRUG00000003130	ENSTRUG00000003134	dnph1 (ENSTRUG00000003415)	yipf3 (ENSTRUG00000003502)	ncoa4 (ENSTRUG00000003924)	ENSTRUG00000024222	prph2b (ENSTRUG00000004626)	UBR2 (ENSTRUG00000004807)	prkn (ENSTRUG00000006244)	KCNG3 (ENSTRUG00000006356)	tspan14 (ENSTRUG00000006403)	EML4 (ENSTRUG00000006655)	ENSTRUG00000022034	ARFGEF3 (ENSTRUG00000007336)	HTR7 (ENSTRUG00000007675) #22	ENSTRUG00000007823 #23	ENSTRUG00000032084	ENSTRUG00000028338	ENSTRUG00000001097	ENSTRUG00000031896	ENSTRUG00000027834	ncapd3 (ENSTRUG00000001187)	SLC24A3 (ENSTRUG00000001777)	ENSTRUG00000020818	CCDC85A (ENSTRUG00000002280)	vrk2 (ENSTRUG00000002366)	fancl (ENSTRUG00000003132)	ENSTRUG00000026393	ENSTRUG00000003815	RIMS1 (ENSTRUG00000029275)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00980000202755	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Ballan wrasse	MODERN SPECIES	18																HTR7 (ENSLBEG00000002622) #22	ENSLBEG00000002541 #23	ENSLBEG00000002468	ANKRD1 (ENSLBEG00000002428) #20	ENSLBEG00000002410	pcgf5a (ENSLBEG00000002360) #19	ANKRD1 (ENSLBEG00000002234) #20	HECTD2 (ENSLBEG00000002135) #18	ppp1r3ca (ENSLBEG00000002119) #17	ENSLBEG00000002061 #15	ENSLBEG00000001729	ENSLBEG00000001652	cyp26c1 (ENSLBEG00000001610) #7	TBC1D12 (ENSLBEG00000001565)	slc22a15 (ENSLBEG00000001502)	ENSLBEG00000001479
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.d	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.e	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b.d	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pike perch	MODERN SPECIES	30	ENSSLUG00000009748	si:ch1073-126c3.2 (ENSSLUG00000009743)	GFRA1 (ENSSLUG00000009725)	ENSSLUG00000009287	PRKCE (ENSSLUG00000008607)	epas1b (ENSSLUG00000008511)	ENSSLUG00000008495	lhb (ENSSLUG00000008486)	ENSSLUG00000008482	lhb (ENSSLUG00000008476)	lhb (ENSSLUG00000008470)	ENSSLUG00000008462	ENSSLUG00000008458	ENSSLUG00000008457	ARFGEF3 (ENSSLUG00000005551)	HTR7 (ENSSLUG00000005164) #22	ENSSLUG00000005087 #23	ENSSLUG00000005061	ENSSLUG00000005042	ENSSLUG00000005037 #20
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000002090	ENSCGOG00000002083	ENSCGOG00000002079	ENSCGOG00000002078	ENSCGOG00000002072	ENSCGOG00000002070	ENSCGOG00000002066	lhb (ENSCGOG00000002004)	ENSCGOG00000001999	ENSCGOG00000001976	ENSCGOG00000001969	ENSCGOG00000001965	ENSCGOG00000001924	ENSCGOG00000001919	ARFGEF3 (ENSCGOG00000001682)	HTR7 (ENSCGOG00000001635) #22	ENSCGOG00000001629	ENSCGOG00000001595 #23	ENSCGOG00000022517	ENSCGOG00000022510	epas1b (ENSCGOG00000022481)	PRKCE (ENSCGOG00000022336)	ENSCGOG00000022319	ENSCGOG00000022248	GFRA1 (ENSCGOG00000022215)	si:ch1073-126c3.2 (ENSCGOG00000022213)	ENSCGOG00000022211	cplx2l (ENSCGOG00000022210)	ENSCGOG00000022208	ENSCGOG00000022207	setd4 (ENSCGOG00000022204)
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT01030000234633.C.a	ENSGT00940000155571.A	ENSGT00440000033965	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Lumpfish	MODERN SPECIES	6	cfap36 (ENSCLMG00005022417)	ppp4r3b (ENSCLMG00005022414)	PNPT1 (ENSCLMG00005022352)	CCDC88A (ENSCLMG00005022317)	ENSCLMG00005021447	ENSCLMG00005021413	SYNPO2L (ENSCLMG00005021403)	ENSCLMG00005021400	hhat (ENSCLMG00005021397)	KCNH1 (ENSCLMG00005021394)	mrpl57 (ENSCLMG00005021392)	cyp3c3 (ENSCLMG00005021389)	mmrn2a (ENSCLMG00005021388)	usp54a (ENSCLMG00005021385)	prorsd1 (ENSCLMG00005021383)	HTR7 (ENSCLMG00005021306) #22	ENSCLMG00005021302	ENSCLMG00005021299 #23	ENSCLMG00005021298	ENSCLMG00005021297	ANKRD1 (ENSCLMG00005021296) #20	pcgf5a (ENSCLMG00005021294) #19	HECTD2 (ENSCLMG00005021286) #18	ppp1r3ca (ENSCLMG00005021284) #17	ENSCLMG00005021282 #15	ENSCLMG00005021237	cyp26c1 (ENSCLMG00005021235) #7	ENSCLMG00005021231	slc22a15 (ENSCLMG00005021226)	ENSCLMG00005021225	kif11 (ENSCLMG00005021109) #10
Stickleback	MODERN SPECIES	6	cfap36 (ENSGACG00000010814)	ppp4r3b (ENSGACG00000010826)	PNPT1 (ENSGACG00000010840)	CCDC88A (ENSGACG00000010868)	ENSGACG00000010879	ENSGACG00000010892	SYNPO2L (ENSGACG00000010901)	ENSGACG00000010907	hhat (ENSGACG00000010922)	kcnh1a (ENSGACG00000010928)	mrpl57 (ENSGACG00000010947)	cyp3c3 (ENSGACG00000010952)	ENSGACG00000010976	usp54a (ENSGACG00000010981)	prorsd1 (ENSGACG00000010992)	HTR7 (ENSGACG00000010997) #22	ENSGACG00000011001	ENSGACG00000011003 #23	ANKRD1 (ENSGACG00000011020) #20	pcgf5a (ENSGACG00000011051) #19	HECTD2 (ENSGACG00000011058) #18	ppp1r3ca (ENSGACG00000011066) #17	ENSGACG00000011071 #15	ENSGACG00000011076	cyp26c1 (ENSGACG00000011080) #7	ENSGACG00000011092	slc22a15 (ENSGACG00000011099)	kif11 (ENSGACG00000011110) #10	EGR2 (ENSGACG00000011142)	adob (ENSGACG00000011146)	ENSGACG00000011151
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.f	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Gilthead seabream	MODERN SPECIES	6	ENSSAUG00010019120	ENSSAUG00010019121	ENSSAUG00010019123	ENSSAUG00010019125	ENSSAUG00010019128	ENSSAUG00010019131	COX20 (ENSSAUG00010019133)	lhb (ENSSAUG00010019134)	ENSSAUG00010019137	ENSSAUG00010019138	ENSSAUG00010019140	ENSSAUG00010019143	ENSSAUG00010019144	ENSSAUG00010019145	ARFGEF3 (ENSSAUG00010019157)	HTR7 (ENSSAUG00010019383) #22	ENSSAUG00010019385 #23	ENSSAUG00010019395	ENSSAUG00010019401	ANKRD1 (ENSSAUG00010019419) #20	pcgf5a (ENSSAUG00010019421) #19	HECTD2 (ENSSAUG00010019436) #18	ppp1r3ca (ENSSAUG00010019931) #17	FGFBP3 (ENSSAUG00010019934) #15	ENSSAUG00010019936	cyp26c1 (ENSSAUG00010019938) #7	ENSSAUG00010019946	ENSSAUG00010019990	ENSSAUG00010019992	ENSSAUG00010019995	ENSSAUG00010019999
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.f	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23
European seabass	MODERN SPECIES	1	ENSDLAG00005032753	ENSDLAG00005006674	ENSDLAG00005027497	ENSDLAG00005032536	ENSDLAG00005006650	ENSDLAG00005006559	ENSDLAG00005006629	ENSDLAG00005032114	ENSDLAG00005006602	ENSDLAG00005028798	ENSDLAG00005006565	ENSDLAG00005031679	ENSDLAG00005013195	ENSDLAG00005005508	ENSDLAG00005004480	ENSDLAG00005004290 #22	ENSDLAG00005004172 #23	ENSDLAG00005004152	ENSDLAG00005028695	ENSDLAG00005018573	ZC3H15 (ENSDLAG00005018563)	ENSDLAG00005030646	DUSP19 (ENSDLAG00005018555)	NCKAP1 (ENSDLAG00005026891)	ENSDLAG00005030099	ENSDLAG00005033108	ENSDLAG00005018522	ENSDLAG00005018503	ENSDLAG00005018465	ENSDLAG00005018404	ENSDLAG00005018162
Large yellow croaker	MODERN SPECIES	28						sult6b1 (ENSLCRG00005019022)	ENSLCRG00005019024	adob (ENSLCRG00005019025)	EGR2 (ENSLCRG00005019026)	kif11 (ENSLCRG00005019027) #10	ENSLCRG00005019030	slc22a15 (ENSLCRG00005019032)	ENSLCRG00005019075	ENSLCRG00005019076	ARFGEF3 (ENSLCRG00005019090)	HTR7 (ENSLCRG00005019799) #22	ENSLCRG00005019801 #23	ENSLCRG00005019804 #23	ENSLCRG00005019805	ENSLCRG00005019806	cdh5 (ENSLCRG00005019807)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00990000205827	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Carangaria	ANCESTRAL SPECIES	32															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Pleuronectoidei	ANCESTRAL SPECIES	48															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Turbot	MODERN SPECIES	6	ENSSMAG00000002162	ENSSMAG00000002212	ENSSMAG00000025912	ENSSMAG00000002242	ENSSMAG00000025524	ENSSMAG00000002271	ENSSMAG00000002304	ENSSMAG00000002318	ENSSMAG00000002327	ENSSMAG00000002336	ENSSMAG00000002417	ENSSMAG00000033544	ENSSMAG00000002503	ENSSMAG00000028119	ENSSMAG00000003763	ENSSMAG00000037769 #22	ENSSMAG00000027821 #23	ENSSMAG00000031522	ANKRD1 (ENSSMAG00000021778) #20	ENSSMAG00000025330	pcgf5a (ENSSMAG00000004039) #19	HECTD2 (ENSSMAG00000004065) #18	ppp1r3ca (ENSSMAG00000024368) #17	ENSSMAG00000004104 #15	ENSSMAG00000004109	ENSSMAG00000004124 #7	ENSSMAG00000004137	ENSSMAG00000004175	ENSSMAG00000033816	ENSSMAG00000036111	ENSSMAG00000029307
Tongue sole	MODERN SPECIES	3	ninl (ENSCSEG00000002867)	gins1 (ENSCSEG00000002860)	abhd12 (ENSCSEG00000002852)	pygb (ENSCSEG00000002842)	ENSCSEG00000002840	entpd6 (ENSCSEG00000002824)	ENSCSEG00000002812	ENSCSEG00000002807	ENSCSEG00000002806	ZNF365 (ENSCSEG00000002804)	adob (ENSCSEG00000002796)	EGR2 (ENSCSEG00000002793)	nkx1.2la (ENSCSEG00000002788)	GPR26 (ENSCSEG00000002783)	ARFGEF3 (ENSCSEG00000002766)	HTR7 (ENSCSEG00000002759) #22	ENSCSEG00000002746 #23	ENSCSEG00000002742	ENSCSEG00000002735	ANAPC1 (ENSCSEG00000002709)	vip (ENSCSEG00000002697)	fbxo5 (ENSCSEG00000002689)	MTRF1L (ENSCSEG00000002684)	desi2 (ENSCSEG00000002678)	ENSCSEG00000002669	ENSCSEG00000002662	mrpl57 (ENSCSEG00000002654)	KCNH1 (ENSCSEG00000002618)	hhat (ENSCSEG00000002610)	MYOZ1 (ENSCSEG00000002601)	SYNPO2L (ENSCSEG00000002595)
Carangaria_A	ANCESTRAL SPECIES	39	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000155790	ENSGT00940000154711.a.a	ENSGT00940000155930	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000163454.a.a.a.b.a.a.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b	ENSGT00940000164014.a.b.a	ENSGT00940000163454.a.a.a.b.a.a.a.b	ENSGT00940000168266	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Seriola	ANCESTRAL SPECIES	144															ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a
Yellowtail amberjack	MODERN SPECIES	1949																HTR7 (ENSSLDG00000004406) #22
Greater amberjack	MODERN SPECIES	55	acss1 (ENSSDUG00000004130)	apmap (ENSSDUG00000004176)	CST7 (ENSSDUG00000004191)	SYNDIG1 (ENSSDUG00000004206)	CUL7 (ENSSDUG00000004222)	ENSSDUG00000004331	ENSSDUG00000004358	ppp2r5d (ENSSDUG00000004373)	mea1 (ENSSDUG00000004418)	LRRC73 (ENSSDUG00000004427)	ENSSDUG00000004452	ENSSDUG00000004501	dnph1 (ENSSDUG00000004542)	yipf3 (ENSSDUG00000004560)	ARFGEF3 (ENSSDUG00000004588)	HTR7 (ENSSDUG00000004660) #22	ENSSDUG00000004734 #23	ENSSDUG00000005097	ANKRD1 (ENSSDUG00000005146) #20	ENSSDUG00000005170	pcgf5a (ENSSDUG00000005188) #19	ENSSDUG00000005211	HECTD2 (ENSSDUG00000005226) #18	ppp1r3ca (ENSSDUG00000005259) #17	ENSSDUG00000005267 #15	ENSSDUG00000005292	cyp26c1 (ENSSDUG00000005393) #7	ENSSDUG00000005414	ENSSDUG00000005430	slc22a15 (ENSSDUG00000005448)	kif11 (ENSSDUG00000005472) #10
Barramundi perch	MODERN SPECIES	141	PRKCE (ENSLCAG00010002348)	epas1b (ENSLCAG00010002330)	ENSLCAG00010002325	ENSLCAG00010002318	ENSLCAG00010002312	lhb (ENSLCAG00010002303)	ENSLCAG00010002298	ENSLCAG00010002295	ENSLCAG00010002293	ENSLCAG00010002289	ENSLCAG00010002287	ENSLCAG00010002283	ENSLCAG00010002280	ENSLCAG00010002278	ENSLCAG00010002191	HTR7 (ENSLCAG00010002160) #22	ENSLCAG00010002018	ANKRD1 (ENSLCAG00010002009) #20	pcgf5a (ENSLCAG00010002006) #19	HECTD2 (ENSLCAG00010001941) #18	ppp1r3ca (ENSLCAG00010001926) #17	FGFBP3 (ENSLCAG00010001923) #15	ENSLCAG00010001918	ENSLCAG00010001915	cyp26c1 (ENSLCAG00010001910) #7	ENSLCAG00010001904	ENSLCAG00010001902	ENSLCAG00010001899	ENSLCAG00010001894	slc22a15 (ENSLCAG00010001883)	ENSLCAG00010001875
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00390000016158	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.m.b	ENSGT00940000164014.a.b.b.m.a	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00940000164766	ENSGT00610000086518.a	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000007106	ENSMAMG00000024375	ENSMAMG00000006995	ENSMAMG00000006944	ENSMAMG00000002532	ENSMAMG00000002365	ENSMAMG00000002354	ENSMAMG00000026745	ENSMAMG00000000488	ENSMAMG00000000455	ENSMAMG00000022630	ENSMAMG00000028606	ENSMAMG00000022625	ENSMAMG00000022627	ENSMAMG00000022616	ENSMAMG00000022613 #22	ENSMAMG00000022609 #23	ENSMAMG00000022606	ENSMAMG00000022605	ANKRD1 (ENSMAMG00000022599) #20	ENSMAMG00000022598	pcgf5a (ENSMAMG00000022596) #19	HECTD2 (ENSMAMG00000022591) #18	ppp1r3ca (ENSMAMG00000022590) #17	ENSMAMG00000025951 #15	ENSMAMG00000022588	ENSMAMG00000022586 #7	ENSMAMG00000022584	ENSMAMG00000022583	ENSMAMG00000022582	ENSMAMG00000022579
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000154922.b.u.a	ENSGT00940000164014.a.a	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000164014.a.b.b.n	ENSGT00940000164014.a.b.b.m.a.a	ENSGT00940000164014.a.b.a	ENSGT00530000064150	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00800000124060.A.b #7	ENSGT00940000156410.h	ENSGT00610000086518.a	ENSGT00940000164766	ENSGT00940000155921 #10	ENSGT00940000158394.f	ENSGT00390000014082.a.a	ENSGT00530000063713.a
Siamese fighting fish	MODERN SPECIES	6	cbr1 (ENSBSLG00000023949)	ENSBSLG00000023962	ENSBSLG00000023984	ENSBSLG00000023987	si:ch1073-126c3.2 (ENSBSLG00000023996)	GFRA1 (ENSBSLG00000024003)	ENSBSLG00000024032	epas1b (ENSBSLG00000024044)	ENSBSLG00000024108	ENSBSLG00000024112	cox20 (ENSBSLG00000024119)	lhb (ENSBSLG00000013206)	ENSBSLG00000013296	ENSBSLG00000013306	ENSBSLG00000013323	ENSBSLG00000014052 #22	ENSBSLG00000014082 #23	ANKRD1 (ENSBSLG00000014214) #20	pcgf5a (ENSBSLG00000014229) #19	HECTD2 (ENSBSLG00000014249) #18	ppp1r3ca (ENSBSLG00000014462) #17	ENSBSLG00000014466 #15	ENSBSLG00000014645	ENSBSLG00000014667	ENSBSLG00000014692	ENSBSLG00000014812	slc22a15 (ENSBSLG00000014817)	ENSBSLG00000014862	kif11 (ENSBSLG00000014878) #10	EGR2 (ENSBSLG00000015085)	adob (ENSBSLG00000015087)
Climbing perch	MODERN SPECIES	6	ENSATEG00000017551	ENSATEG00000017742	ENSATEG00000017802	ENSATEG00000017828	ENSATEG00000017879	ENSATEG00000026193	ENSATEG00000027775	ENSATEG00000026087	ENSATEG00000018470	ENSATEG00000028353	ENSATEG00000018519	ENSATEG00000027275	ENSATEG00000018527	ENSATEG00000029615	ENSATEG00000018575	ENSATEG00000025862 #22	ENSATEG00000018739 #23	ANKRD1 (ENSATEG00000018886) #20	pcgf5a (ENSATEG00000018898) #19	HECTD2 (ENSATEG00000018921) #18	ENSATEG00000018980	ppp1r3ca (ENSATEG00000027000) #17	ENSATEG00000019000 #15	ENSATEG00000019011	ENSATEG00000019033 #7	ENSATEG00000019048	ENSATEG00000030196	ENSATEG00000028464	ENSATEG00000027736	ENSATEG00000019066	ENSATEG00000025262
Clupeocephala	ANCESTRAL SPECIES	82	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a	ENSGT00940000156410.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19
Euteleosteomorpha	ANCESTRAL SPECIES	88	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b #26	ENSGT00730000111085.A	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000156169.a.b #25	ENSGT00940000157373.l #24	ENSGT00940000165449	ENSGT01010000222287.B.a.a.a.a.a.a #22	ENSGT00940000155989.e #23	ENSGT00940000153956.a.b #20	ENSGT00940000155896.k #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a
Protacanthopterygii	ANCESTRAL SPECIES	126	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00940000162142.c #33	ENSGT00950000182946.lb.b.k.b #26	ENSGT00550000074823.b.a	ENSGT00940000154335.b	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.b #17	ENSGT00940000154372.b #15	ENSGT00940000157037.b.b.b	ENSGT00950000182946.lb.a #26
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	464													ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.b #26	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
Coho salmon	MODERN SPECIES	17	asah2 (ENSOKIG00005023313)	sgms1b (ENSOKIG00005023210)	minpp1b (ENSOKIG00005023191)	atad1b (ENSOKIG00005023124)	ptenb (ENSOKIG00005022866)	rnls (ENSOKIG00005022766)	lipf (ENSOKIG00005022447) #32	STAMBPL1 (ENSOKIG00005022387) #36	acta2 (ENSOKIG00005022349)	ch25h (ENSOKIG00005022339) #33	ch25h (ENSOKIG00005022334) #33	ifit9 (ENSOKIG00005022327) #26	ENSOKIG00005022304	slc16a12b (ENSOKIG00005022295) #25	pank1b (ENSOKIG00005022224) #24	HTR7 (ENSOKIG00005022213) #22	ENSOKIG00005022101 #23	rpp30 (ENSOKIG00005021605) #21	ankrd1b (ENSOKIG00005021528) #20	pcgf5b (ENSOKIG00005021516) #19	HECTD2 (ENSOKIG00005021411) #18	ppp1r3cb (ENSOKIG00005021393) #17	TNKS2 (ENSOKIG00005017871) #16	ENSOKIG00005017722	ENSOKIG00005015507	noc3l (ENSOKIG00005014304)	plce1 (ENSOKIG00005014096)	SLC35G1 (ENSOKIG00005014048)	lgi1b (ENSOKIG00005013986)	ENSOKIG00005013974	fra10ac1 (ENSOKIG00005013902)
Chinook salmon	MODERN SPECIES	17	A1CF (ENSOTSG00005006693)	ENSOTSG00005006690	asah2 (ENSOTSG00005006679)	sgms1b (ENSOTSG00005006674)	minpp1b (ENSOTSG00005006673)	ENSOTSG00005006651	atad1b (ENSOTSG00005006228)	lipf (ENSOTSG00005004799) #32	STAMBPL1 (ENSOTSG00005004787) #36	acta2 (ENSOTSG00005004768)	ch25h (ENSOTSG00005004767) #33	ifit9 (ENSOTSG00005004766) #26	ifit9 (ENSOTSG00005004764) #26	slc16a12b (ENSOTSG00005004762) #25	pank1b (ENSOTSG00005004647) #24	ENSOTSG00005004645 #22	ENSOTSG00005004641 #23	rpp30 (ENSOTSG00005002960) #21	ankrd1b (ENSOTSG00005002888) #20	pcgf5b (ENSOTSG00005002879) #19	HECTD2 (ENSOTSG00005002656) #18	ppp1r3cb (ENSOTSG00005002568) #17	TNKS2 (ENSOTSG00005041685) #16	ENSOTSG00005041678	ENSOTSG00005037290	noc3l (ENSOTSG00005035685)	plce1 (ENSOTSG00005035666)	SLC35G1 (ENSOTSG00005035657)	lgi1b (ENSOTSG00005035653)	fra10ac1 (ENSOTSG00005035647)	pde6c (ENSOTSG00005032627)
Rainbow trout	MODERN SPECIES	12	sgms1b (ENSOMYG00000015549)	ENSOMYG00000068829	MINPP1 (ENSOMYG00000015566)	atad1b (ENSOMYG00000015572)	ENSOMYG00000015612	ENSOMYG00000015734	ENSOMYG00000015705	lipf (ENSOMYG00000015784) #32	STAMBPL1 (ENSOMYG00000016360) #36	acta2 (ENSOMYG00000016388)	ch25h (ENSOMYG00000016396) #33	ch25h (ENSOMYG00000016399) #33	ifit9 (ENSOMYG00000016409) #26	slc16a12b (ENSOMYG00000016431) #25	pank1b (ENSOMYG00000016459) #24	ENSOMYG00000016549 #22	ENSOMYG00000016554 #23	rpp30 (ENSOMYG00000016592) #21	ankrd1b (ENSOMYG00000017032) #20	pcgf5b (ENSOMYG00000017040) #19	HECTD2 (ENSOMYG00000017106) #18	ppp1r3cb (ENSOMYG00000017271) #17	TNKS2 (ENSOMYG00000017426) #16	ENSOMYG00000018910	ENSOMYG00000018970	noc3l (ENSOMYG00000019566)	ENSOMYG00000011574	plce1 (ENSOMYG00000021696)	SLC35G1 (ENSOMYG00000069145)	lgi1b (ENSOMYG00000021896)	ENSOMYG00000071221
Salmo	ANCESTRAL SPECIES	31	ENSGT00940000154704.d.b.z.b.b	ENSGT00940000158678.i.b	ENSGT00390000015792	ENSGT00940000158306.e.a	ENSGT00390000018409.g.a	ENSGT00550000074823.b.a.a	ENSGT00940000154335.b.m	ENSGT00390000016052.x.c	ENSGT00940000154696.f #32	ENSGT00940000153710.b.a #36	ENSGT00940000154710.a.a.e	ENSGT00940000162142.d.i #33	ENSGT00950000182946.mb.e.a #26	ENSGT00940000156169.a.a.i #25	ENSGT00940000157373.k.a #24	ENSGT01010000222287.B.a.a.a.a.a.b.a #22	ENSGT00940000155989.d.b #23	ENSGT00390000000883.s.b #21	ENSGT00940000153956.a.a.c #20	ENSGT00940000155896.l.c #19	ENSGT00940000157750.w.a #18	ENSGT00940000155648.B.a.d #17	ENSGT00940000159911 #16	ENSGT00940000157037.b.b.a.g	ENSGT00940000156410.g.a	ENSGT00390000008540.e	ENSGT00940000157356.m.b	ENSGT00940000153249.a.c	ENSGT00940000164645.b.d	ENSGT00390000017833	ENSGT00940000157825.a.c
River trout	MODERN SPECIES	1	PRKG1 (ENSSTUG00000030007)	asah2 (ENSSTUG00000029837)	sgms1b (ENSSTUG00000029819)	A1CF (ENSSTUG00000029748)	atad1b (ENSSTUG00000029487)	ENSSTUG00000029437	rnls (ENSSTUG00000029420)	lipf (ENSSTUG00000028446) #32	STAMBPL1 (ENSSTUG00000028373) #36	acta2 (ENSSTUG00000028343)	ch25h (ENSSTUG00000028337) #33	ch25h (ENSSTUG00000028330) #33	ifit9 (ENSSTUG00000028324) #26	slc16a12b (ENSSTUG00000028198) #25	pank1b (ENSSTUG00000028131) #24	HTR7 (ENSSTUG00000028123) #22	ENSSTUG00000028094 #23	rpp30 (ENSSTUG00000027959) #21	ankrd1b (ENSSTUG00000027947) #20	pcgf5b (ENSSTUG00000027933) #19	HECTD2 (ENSSTUG00000027869) #18	ppp1r3cb (ENSSTUG00000027861) #17	TNKS2 (ENSSTUG00000025727) #16	ENSSTUG00000025654	ENSSTUG00000023551	noc3l (ENSSTUG00000021934)	plce1 (ENSSTUG00000021408)	SLC35G1 (ENSSTUG00000021392)	lgi1b (ENSSTUG00000021343)	fra10ac1 (ENSSTUG00000021184)	pde6c (ENSSTUG00000018969)
Atlantic salmon	MODERN SPECIES	20	PRKG1 (ENSSSAG00000070265)	A1CF (ENSSSAG00000070249)	asah2 (ENSSSAG00000069141)	minpp1b (ENSSSAG00000086246)	atad1b (ENSSSAG00000069025)	ptenb (ENSSSAG00000068992)	rnls (ENSSSAG00000115824)	rnls (ENSSSAG00000068984)	lich (ENSSSAG00000068628) #32	STAMBPL1 (ENSSSAG00000114861) #36	acta2 (ENSSSAG00000068379)	ch25h (ENSSSAG00000068373) #33	ifit9 (ENSSSAG00000068365) #26	slc16a12b (ENSSSAG00000068354) #25	pank1b (ENSSSAG00000113557) #24	ENSSSAG00000113948 #22	ENSSSAG00000068302 #23	rpp30 (ENSSSAG00000068280) #21	rpp30 (ENSSSAG00000068290) #21	ankrd1b (ENSSSAG00000068271) #20	pcgf5b (ENSSSAG00000116687) #19	ENSSSAG00000088361	hecd2 (ENSSSAG00000068133) #18	ppp1r3cb (ENSSSAG00000120374) #17	TNKS2 (ENSSSAG00000067042) #16	ENSSSAG00000067017	tbc1d12 (ENSSSAG00000064107)	noc3l (ENSSSAG00000082464)	plce1 (ENSSSAG00000063853)	slc35g1 (ENSSSAG00000063829)	lgi1b (ENSSSAG00000063797)
Huchen	MODERN SPECIES	2498											ENSHHUG00000038412	ifit9 (ENSHHUG00000038395) #26	ifit9 (ENSHHUG00000038394) #26	slc16a12b (ENSHHUG00000038392) #25	pank1b (ENSHHUG00000038201) #24	HTR7 (ENSHHUG00000038190) #22
Salmoninae	ANCESTRAL SPECIES	371	ENSGT00940000158306.e.b	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
Salmo	ANCESTRAL SPECIES	3	ENSGT00940000158306.e.b	ENSGT00390000018409.g.b	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
River trout	MODERN SPECIES	11	minpp1b (ENSSTUG00000019854)	papss2b (ENSSTUG00000019894)	atad1b (ENSSTUG00000020648)	ptenb (ENSSTUG00000020846)	rnls (ENSSTUG00000020942)	lipf (ENSSTUG00000020954) #32	ankrd22 (ENSSTUG00000020992) #37	STAMBPL1 (ENSSTUG00000021026) #36	acta2 (ENSSTUG00000021065)	ch25h (ENSSTUG00000021191) #33	ifit9 (ENSSTUG00000021202) #26	ifit9 (ENSSTUG00000021205) #26	ifit10 (ENSSTUG00000021212) #26	slc16a12b (ENSSTUG00000021219) #25	pank1b (ENSSTUG00000021228) #24	ENSSTUG00000021310 #22	ENSSTUG00000021337 #23	rpp30 (ENSSTUG00000021371) #21	ankrd1b (ENSSTUG00000021402) #20	pcgf5b (ENSSTUG00000021414) #19	HECTD2 (ENSSTUG00000021437) #18	ppp1r3cb (ENSSTUG00000021484) #17	ENSSTUG00000021491	ENSSTUG00000021513	noc3l (ENSSTUG00000021760)	plce1 (ENSSTUG00000021837)	SLC35G1 (ENSSTUG00000022842)	lgi1b (ENSSTUG00000022854)	pde6c (ENSSTUG00000023045)	rbp4 (ENSSTUG00000024776)	cep55l (ENSSTUG00000024840)
Atlantic salmon	MODERN SPECIES	10	minpp1b (ENSSSAG00000099627)	papss2b (ENSSSAG00000078629)	atad1b (ENSSSAG00000078880)	ENSSSAG00000078896	rnls (ENSSSAG00000092349)	lipf (ENSSSAG00000078919) #32	ankrd22 (ENSSSAG00000079009) #37	STAMBPL1 (ENSSSAG00000115451) #36	acta2 (ENSSSAG00000044179)	ch25h (ENSSSAG00000105272) #33	ENSSSAG00000107948	ifit9 (ENSSSAG00000079026) #26	ifit10 (ENSSSAG00000079036) #26	slc16a12b (ENSSSAG00000079037) #25	pank1b (ENSSSAG00000079040) #24	ENSSSAG00000098816 #22	ENSSSAG00000079056 #23	rpp30 (ENSSSAG00000079083) #21	ankrd1 (ENSSSAG00000079087) #20	pcgf5b (ENSSSAG00000079093) #19	hectd2 (ENSSSAG00000079102) #18	ppp1r3cb (ENSSSAG00000118758) #17	ENSSSAG00000079156	ENSSSAG00000006207	noc3l (ENSSSAG00000006575)	plce1 (ENSSSAG00000006714)	SLC35G1 (ENSSSAG00000084489)	lgi1b (ENSSSAG00000007186)	pde6c (ENSSSAG00000007238)	rbp4 (ENSSSAG00000007721)	cep55l (ENSSSAG00000007731)
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT00390000009613.a	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.mb.f.b #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00390000008540.f	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT00390000018409.g.b	ENSGT00390000009613.a	ENSGT00550000074823.b.a.b	ENSGT00940000154335.b.n	ENSGT00390000016052.w	ENSGT00940000154696.e #32	ENSGT00390000009005 #37	ENSGT00940000153710.b.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a.f	ENSGT00940000162142.d.j #33	ENSGT00950000182946.mb.f.a #26	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a.j #25	ENSGT00940000157373.k.b #24	ENSGT01010000222287.B.a.a.a.a.a.b.b #22	ENSGT00940000155989.d.a #23	ENSGT00390000000883.t #21	ENSGT00940000153956.a.a.d #20	ENSGT00940000155896.l.d #19	ENSGT00940000157750.w.b #18	ENSGT00940000155648.B.a.c #17	ENSGT00940000157037.b.b.a.h	ENSGT00940000156410.g.b	ENSGT00940000157356.m.a	ENSGT00940000153249.a.d	ENSGT00940000164645.b.c	ENSGT00940000157825.a.d	ENSGT00510000047107.A.i	ENSGT00510000047961.c.b	ENSGT00940000154741.d.n
Chinook salmon	MODERN SPECIES	16	sgms1b (ENSOTSG00005019983)	minpp1b (ENSOTSG00005019984)	papss2b (ENSOTSG00005020004)	atad1b (ENSOTSG00005023553)	ENSOTSG00005023571	rnls (ENSOTSG00005023575)	lipf (ENSOTSG00005023583) #32	ankrd22 (ENSOTSG00005023589) #37	STAMBPL1 (ENSOTSG00005023593) #36	ACTA2 (ENSOTSG00005023595) #35	ch25h (ENSOTSG00005023596) #33	ifit9 (ENSOTSG00005023597) #26	ifit10 (ENSOTSG00005023598) #26	slc16a12b (ENSOTSG00005023599) #25	pank1b (ENSOTSG00005023600) #24	HTR7 (ENSOTSG00005023602) #22	ENSOTSG00005023603 #23	rpp30 (ENSOTSG00005023604) #21	ankrd1b (ENSOTSG00005023605) #20	pcgf5b (ENSOTSG00005023606) #19	HECTD2 (ENSOTSG00005023621) #18	ppp1r3cb (ENSOTSG00005023625) #17	ENSOTSG00005023627	ENSOTSG00005023630	plce1 (ENSOTSG00005023678)	ENSOTSG00005023831	SLC35G1 (ENSOTSG00005023833)	lgi1b (ENSOTSG00005023834)	pde6c (ENSOTSG00005003183)	rbp4 (ENSOTSG00005013615)	cep55l (ENSOTSG00005013616)
Coho salmon	MODERN SPECIES	12	minpp1b (ENSOKIG00005006024)	papss2b (ENSOKIG00005006074)	atad1b (ENSOKIG00005006711)	ptenb (ENSOKIG00005006734)	rnls (ENSOKIG00005006807)	lipf (ENSOKIG00005006837) #32	ankrd22 (ENSOKIG00005006914) #37	STAMBPL1 (ENSOKIG00005006941) #36	ENSOKIG00005006980	acta2 (ENSOKIG00005007003)	ch25h (ENSOKIG00005007147) #33	ifit9 (ENSOKIG00005007160) #26	ifit10 (ENSOKIG00005007185) #26	slc16a12b (ENSOKIG00005007195) #25	pank1b (ENSOKIG00005007284) #24	ENSOKIG00005007323 #22	ENSOKIG00005007330 #23	rpp30 (ENSOKIG00005007342) #21	ankrd1b (ENSOKIG00005007352) #20	pcgf5b (ENSOKIG00005007395) #19	HECTD2 (ENSOKIG00005007420) #18	ppp1r3cb (ENSOKIG00005007665) #17	ENSOKIG00005007674	ENSOKIG00005007698	plce1 (ENSOKIG00005007878)	SLC35G1 (ENSOKIG00005008435)	lgi1b (ENSOKIG00005008445)	pde6c (ENSOKIG00005008772)	rbp4 (ENSOKIG00005014051)	myof (ENSOKIG00005014542)	ENSOKIG00005030600
Rainbow trout	MODERN SPECIES	7	lipf (ENSOMYG00000013606) #32	ankrd22 (ENSOMYG00000013746) #37	ENSOMYG00000067337	STAMBPL1 (ENSOMYG00000013771) #36	acta2 (ENSOMYG00000013827)	ENSOMYG00000013950	ch25h (ENSOMYG00000013956) #33	ENSOMYG00000048512	ifit9 (ENSOMYG00000016609) #26	ifit9 (ENSOMYG00000016615) #26	ifit9 (ENSOMYG00000071713) #26	ifit10 (ENSOMYG00000016652) #26	slc16a12b (ENSOMYG00000016656) #25	ENSOMYG00000049064	pank1b (ENSOMYG00000016671) #24	ENSOMYG00000016721 #22	ENSOMYG00000016727 #23	rpp30 (ENSOMYG00000016794) #21	ankrd1b (ENSOMYG00000016831) #20	pcgf5b (ENSOMYG00000016857) #19	HECTD2 (ENSOMYG00000016911) #18	ENSOMYG00000059077	ENSOMYG00000069770	ppp1r3cb (ENSOMYG00000065271) #17	ENSOMYG00000017275	ENSOMYG00000017285	noc3l (ENSOMYG00000057529)	plce1 (ENSOMYG00000017418)	lgi1b (ENSOMYG00000018546)	ENSOMYG00000057224	pde6c (ENSOMYG00000019534)
Huchen	MODERN SPECIES	1942														slc16a12b (ENSHHUG00000022005) #25	pank1b (ENSHHUG00000021986) #24	ENSHHUG00000021980 #22	ENSHHUG00000021906 #23	ENSHHUG00000021895	ankrd1b (ENSHHUG00000021871) #20	pcgf5b (ENSHHUG00000021851) #19	HECTD2 (ENSHHUG00000021820) #18
Northern pike	MODERN SPECIES	4	papss2b (ENSELUG00000003284)	atad1b (ENSELUG00000003303)	ENSELUG00000003315	rnls (ENSELUG00000003342)	lipf (ENSELUG00000003363) #32	STAMBPL1 (ENSELUG00000003414) #36	ACTA2 (ENSELUG00000003448) #35	ch25h (ENSELUG00000030905) #33	ifit9 (ENSELUG00000030573) #26	ch25h (ENSELUG00000030598) #33	ch25h (ENSELUG00000027120) #33	ifit9 (ENSELUG00000003551) #26	ifit10 (ENSELUG00000003625) #26	slc16a12b (ENSELUG00000033464) #25	pank1b (ENSELUG00000003659) #24	HTR7 (ENSELUG00000030806) #22	ENSELUG00000003704 #23	rpp30 (ENSELUG00000003731) #21	ankrd1b (ENSELUG00000003750) #20	pcgf5b (ENSELUG00000003772) #19	ENSELUG00000033205	HECTD2 (ENSELUG00000003815) #18	ppp1r3cb (ENSELUG00000003844) #17	TNKS2 (ENSELUG00000003897) #16	ENSELUG00000003919	ENSELUG00000003975	ENSELUG00000030953	ENSELUG00000032803	noc3l (ENSELUG00000004023)	plce1 (ENSELUG00000004174)	SLC35G1 (ENSELUG00000004227)
Otomorpha	ANCESTRAL SPECIES	79	ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154148.a.a #35	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Otophysi	ANCESTRAL SPECIES		ENSGT00390000009613.a	ENSGT00940000163053.c.a	ENSGT00950000183126.b.b #34	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a.e #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00940000155825.p	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000160739	ENSGT00390000002808
Channel catfish	MODERN SPECIES	4	minpp1 (ENSIPUG00000003342)	PAPSS2 (ENSIPUG00000003346)	atad1b (ENSIPUG00000003383)	PTEN (ENSIPUG00000003433)	rnls (ENSIPUG00000003450)	lipf (ENSIPUG00000003479) #32	ankrd22 (ENSIPUG00000003527) #37	stambpl1 (ENSIPUG00000003570) #36	acta2 (ENSIPUG00000003669)	ch25h (ENSIPUG00000003689) #33	ENSIPUG00000003700 #26	ENSIPUG00000003709 #26	ENSIPUG00000003767 #26	slc16a12b (ENSIPUG00000003779) #25	PANK1 (ENSIPUG00000003795) #24	HTR7 (ENSIPUG00000003823) #22	kif20b (ENSIPUG00000003832) #23	rpp30 (ENSIPUG00000003863) #21	ankrd1 (ENSIPUG00000003900) #20	pcgf5a (ENSIPUG00000003929) #19	hectd2 (ENSIPUG00000003970) #18	ppp1r3cb (ENSIPUG00000004006) #17	MPP3 (ENSIPUG00000004019)	muc13b (ENSIPUG00000004055)	znf281 (ENSIPUG00000004070)	ENSIPUG00000004081	ENSIPUG00000004086	ENSIPUG00000004099	nmt1b (ENSIPUG00000004204)	PLCD3 (ENSIPUG00000004236)	acbd4 (ENSIPUG00000004299)
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT00940000155825.p	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000160739	ENSGT00390000002808
Electric eel	MODERN SPECIES	204	CYTH3 (ENSEEEG00000010346)	minpp1b (ENSEEEG00000010376)	papss2b (ENSEEEG00000010384)	atad1b (ENSEEEG00000010403)	ptenb (ENSEEEG00000010416)	rnls (ENSEEEG00000010492)	lipf (ENSEEEG00000010496) #32	ankrd22 (ENSEEEG00000010501) #37	STAMBPL1 (ENSEEEG00000010505) #36	acta2 (ENSEEEG00000010838)	ch25h (ENSEEEG00000014819) #33	ENSEEEG00000014821 #26	ENSEEEG00000014822 #26	slc16a12b (ENSEEEG00000014824) #25	pank1b (ENSEEEG00000014827) #24	ENSEEEG00000014831 #22	ENSEEEG00000014869 #23	rpp30 (ENSEEEG00000014870) #21	ankrd1b (ENSEEEG00000014872) #20	pcgf5b (ENSEEEG00000014876) #19	HECTD2 (ENSEEEG00000014888) #18	ppp1r3cb (ENSEEEG00000014973) #17	MPP3 (ENSEEEG00000014974)	znf281b (ENSEEEG00000014976)	ENSEEEG00000014977	ENSEEEG00000014980	nmt1b (ENSEEEG00000014981)	PLCD3 (ENSEEEG00000015012)	acbd4 (ENSEEEG00000015240)	hexim1 (ENSEEEG00000015241)	ENSEEEG00000015242
Characoidei	ANCESTRAL SPECIES	50	ENSGT00390000018409.g	ENSGT00390000009613.a	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696.a #32	ENSGT00390000009005 #37	ENSGT00940000154696.b #32	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.lb.a.e.a #26	ENSGT00950000182946.lb.a.e.b #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c.f	ENSGT00940000156993.c.e	ENSGT00940000160739
Red-bellied piranha	MODERN SPECIES	695																HTR7 (ENSPNAG00000014756) #22	ENSPNAG00000014774 #23	rpp30 (ENSPNAG00000014804) #21	ankrd1b (ENSPNAG00000003329) #20	pcgf5b (ENSPNAG00000014964) #19	HECTD2 (ENSPNAG00000015035) #18	ppp1r3cb (ENSPNAG00000015041) #17
Mexicana tetra	MODERN SPECIES	19														slc16a12b (ENSAMXG00000035555) #25	pank1b (ENSAMXG00000007727) #24	ENSAMXG00000007726 #22	ENSAMXG00000007718 #23	rpp30 (ENSAMXG00000040653) #21	ankrd1b (ENSAMXG00000007712) #20	pcgf5b (ENSAMXG00000043388) #19	HECTD2 (ENSAMXG00000007707) #18	ppp1r3cb (ENSAMXG00000031030) #17	MPP3 (ENSAMXG00000034993)	muc13b (ENSAMXG00000036326)	ENSAMXG00000029637	ENSAMXG00000034126	znf281b (ENSAMXG00000032511)	ENSAMXG00000042244	ENSAMXG00000006250	nmt1b (ENSAMXG00000006265)	PLCD3 (ENSAMXG00000006275)
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00390000018409.g	ENSGT00550000074823.b.a	ENSGT00940000154335.b.f	ENSGT00390000016052	ENSGT00940000154696 #32	ENSGT00390000009005 #37	ENSGT00940000153710.b #36	ENSGT00940000154710.a.a	ENSGT00940000162142.d #33	ENSGT00950000182946.mb #26	ENSGT00950000182946.lb.a.e.c #26	ENSGT00950000182946.lb.a.e.d.b #26	ENSGT00950000182946.lb.a.e.d.a #26	ENSGT00940000156169.a.a #25	ENSGT00940000157373.k #24	ENSGT01010000222287.B.a.a.a.a.a.b #22	ENSGT00940000155989.d #23	ENSGT00390000000883 #21	ENSGT00940000153956.a.a #20	ENSGT00940000155896.l #19	ENSGT00940000157750 #18	ENSGT00940000155648.B.a #17	ENSGT00940000157190.d	ENSGT00940000165769	ENSGT00710000106813.B.b	ENSGT00940000161586.d	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	749																ENSGT01010000222287.B.a.a.a.a.a.b.c #22	ENSGT00940000155989.d.i #23	ENSGT00390000000883.r #21	ENSGT00940000153956.a.a.a #20	ENSGT00940000155896.l.a #19	ENSGT00940000157750.y #18	ENSGT00940000155648.B.a.a #17	ENSGT00940000157190.d.b	ENSGT00940000165769	ENSGT00940000161586.d.b
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000154596.b.r	ENSGT00940000155825.p.b	ENSGT00390000009613.a.u.b	ENSGT00550000074823.b.a.h	ENSGT00940000154335.b.f.a	ENSGT00390000016052.s	ENSGT00940000154696.d #32	ENSGT00390000009005.d #37	ENSGT00940000153710.b.k #36	ENSGT00940000154710.a.a.a	ENSGT00950000182946.lb.a.e.c.b #26	ENSGT00950000182946.lb.a.e.d.b.b #26	ENSGT00950000182946.lb.a.e.d.a #26	ENSGT00940000156169.a.a.a #25	ENSGT00940000157373.k.d #24	ENSGT01010000222287.B.a.a.a.a.a.b.c #22	ENSGT00940000155989.d.i #23	ENSGT00390000000883.r #21	ENSGT00940000153956.a.a.a #20	ENSGT00940000155896.l.a #19	ENSGT00940000157750.y #18	ENSGT00940000155648.B.a.a #17	ENSGT00940000157190.d.b	ENSGT00940000165769	ENSGT00940000161586.d.b
Golden-line barbel	MODERN SPECIES	56	ENSSGRG00000008885	CYTH3 (ENSSGRG00000008931)	papss2b (ENSSGRG00000012270)	atad1b (ENSSGRG00000012359)	ENSSGRG00000012509	ptenb (ENSSGRG00000012511)	rnls (ENSSGRG00000012563)	lipf (ENSSGRG00000012564) #32	ankrd22 (ENSSGRG00000012743) #37	STAMBPL1 (ENSSGRG00000012744) #36	acta2 (ENSSGRG00000012968)	ifit10 (ENSSGRG00000015868) #26	ifit11 (ENSSGRG00000015869) #26	slc16a12b (ENSSGRG00000015870) #25	pank1b (ENSSGRG00000015877) #24	HTR7 (ENSSGRG00000015879) #22	ENSSGRG00000015901 #23	rpp30 (ENSSGRG00000015903) #21	ankrd1b (ENSSGRG00000015914) #20	pcgf5b (ENSSGRG00000015916) #19	HECTD2 (ENSSGRG00000015921) #18	ppp1r3cb (ENSSGRG00000016122) #17	MPP3 (ENSSGRG00000016125)	ENSSGRG00000016160	ENSSGRG00000016163	znf281b (ENSSGRG00000016164)	ENSSGRG00000016165	fkbp7 (ENSSGRG00000016166)	COL5A2 (ENSSGRG00000016186)	gulp1a (ENSSGRG00000016261)	tfpia (ENSSGRG00000016304)
Common carp reference	MODERN SPECIES	25	ENSCCRG00000040013	ENSCCRG00000077505	papss2b (ENSCCRG00000024874)	atad1b (ENSCCRG00000041854)	ptenb (ENSCCRG00000082140)	rnls (ENSCCRG00000025037)	lipf (ENSCCRG00000025044) #32	ankrd22 (ENSCCRG00000031810) #37	STAMBPL1 (ENSCCRG00000016476) #36	acta2 (ENSCCRG00000016502)	ifit9 (ENSCCRG00000017334) #26	ifit11 (ENSCCRG00000073912) #26	ifit12 (ENSCCRG00000049203) #26	slc16a12b (ENSCCRG00000070698) #25	pank1b (ENSCCRG00000051621) #24	ENSCCRG00000057385 #22	ENSCCRG00000065554	ENSCCRG00000035242 #23	ankrd1b (ENSCCRG00000035265) #20	rpp30 (ENSCCRG00000035247) #21	pcgf5b (ENSCCRG00000061913) #19	HECTD2 (ENSCCRG00000005742) #18	ppp1r3cb (ENSCCRG00000078319) #17	ENSCCRG00000005407	ENSCCRG00000057338	ENSCCRG00000005502	znf281b (ENSCCRG00000014264)	ENSCCRG00000082457	ENSCCRG00000074458	ENSCCRG00000055824	ENSCCRG00000063617
Goldfish	MODERN SPECIES	3	BICRAL (ENSCARG00000002880)	ENSCARG00000002887	si:dkey-21c1.1 (ENSCARG00000002892)	TEPSIN (ENSCARG00000002906)	ndufaf8 (ENSCARG00000002991)	SLC38A10 (ENSCARG00000003033)	ENSCARG00000003120	BAHCC1 (ENSCARG00000003131)	fscn2b (ENSCARG00000003160)	birc5a (ENSCARG00000003169)	TMEM235 (ENSCARG00000003175)	tha1 (ENSCARG00000003180)	socs3b (ENSCARG00000003201)	PGS1 (ENSCARG00000003207)	cyth1b (ENSCARG00000003240)	HTR7 (ENSCARG00000003268) #22	ENSCARG00000003277 #23	rpp30 (ENSCARG00000003300) #21	ankrd1b (ENSCARG00000003339) #20	pcgf5b (ENSCARG00000003346) #19	HECTD2 (ENSCARG00000003356) #18	ppp1r3cb (ENSCARG00000003367) #17	ENSCARG00000003376	desi1b (ENSCARG00000003378)	xrcc6 (ENSCARG00000003391)	josd1 (ENSCARG00000003441)	ENSCARG00000003445	EP300 (ENSCARG00000003476)	l3mbtl2 (ENSCARG00000003695)	chadlb (ENSCARG00000004193)	rangap1b (ENSCARG00000004218)
Cyprininae	ANCESTRAL SPECIES	36	ENSGT00940000154596.b.q	ENSGT00940000155825.p.a	ENSGT00390000009613.a.u.a	ENSGT00550000074823.b.a.g	ENSGT00940000154335.b.f.b	ENSGT00390000016052.t	ENSGT00940000154696.c #32	ENSGT00390000009005.c #37	ENSGT00940000153710.b.l #36	ENSGT00940000154710.a.a.b	ENSGT00940000162142.d.c #33	ENSGT00950000182946.lb.a.e.c #26	ENSGT00950000182946.lb.a.e.d.b.a #26	ENSGT00940000156169.a.a.b #25	ENSGT00940000157373.k.c #24	ENSGT01010000222287.B.a.a.a.a.a.b.d #22	ENSGT00940000155989.d.j #23	ENSGT00390000000883.q #21	ENSGT00940000153956.a.a.b #20	ENSGT00940000155896.l.b #19	ENSGT00940000157750.z #18	ENSGT00940000155648.B.a.b #17	ENSGT00940000157190.d.a	ENSGT00710000106813.B.b.a	ENSGT00940000161586.d.a	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808.l
Cyprininae_a	ANCESTRAL SPECIES	37	ENSGT00940000155825.p.a	ENSGT00390000009613.a.u.a	ENSGT00550000074823.b.a.g.a	ENSGT00550000074823.b.a.g.b	ENSGT00940000163053.d	ENSGT00390000016052.t	ENSGT00940000154696.c #32	ENSGT00390000009005.c #37	ENSGT00940000153710.b.l #36	ENSGT00940000154710.a.a.b	ENSGT00940000162142.d.c #33	ENSGT00950000182946.lb.a.e.c.a #26	ENSGT00950000182946.lb.a.e.d.b.a #26	ENSGT00940000156169.a.a.b #25	ENSGT00940000157373.k.c #24	ENSGT01010000222287.B.a.a.a.a.a.b.d #22	ENSGT00940000155989.d.j #23	ENSGT00390000000883.q #21	ENSGT00940000153956.a.a.b #20	ENSGT00940000155896.l.b #19	ENSGT00940000157750.z #18	ENSGT00940000155648.B.a.b #17	ENSGT00940000157190.d.a	ENSGT00710000106813.B.b.a	ENSGT00940000161586.d.a	ENSGT01080000257365.b.a.a.b.b.e.b	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00940000156993.c	ENSGT00940000160739	ENSGT00390000002808.l
Common carp reference	MODERN SPECIES	44	papss2b (ENSCCRG00000077451)	atad1b (ENSCCRG00000069922)	atad1b (ENSCCRG00000042064)	ENSCCRG00000040790	rnls (ENSCCRG00000031808)	lipf (ENSCCRG00000017387) #32	ENSCCRG00000067356	ankrd22 (ENSCCRG00000017391) #37	STAMBPL1 (ENSCCRG00000017397) #36	acta2 (ENSCCRG00000064755)	ch25h (ENSCCRG00000017332) #33	ifit10 (ENSCCRG00000017422) #26	ifit11 (ENSCCRG00000057220) #26	slc16a12b (ENSCCRG00000017427) #25	pank1b (ENSCCRG00000017433) #24	ENSCCRG00000047522 #22	ENSCCRG00000073919 #23	rpp30 (ENSCCRG00000018350) #21	ankrd1b (ENSCCRG00000018378) #20	pcgf5b (ENSCCRG00000035272) #19	HECTD2 (ENSCCRG00000046734) #18	ppp1r3cb (ENSCCRG00000063719) #17	ENSCCRG00000046778	muc13b (ENSCCRG00000046798)	znf281b (ENSCCRG00000068444)	ENSCCRG00000057785	ENSCCRG00000026521	PLCD3 (ENSCCRG00000054676)	nmt1b (ENSCCRG00000070594)	acbd4 (ENSCCRG00000025027)	hexim1 (ENSCCRG00000061552)
Golden-line barbel	MODERN SPECIES	179	CYTH3 (ENSSGRG00000031597)	ENSSGRG00000031596	papss2b (ENSSGRG00000030116)	atad1b (ENSSGRG00000030003)	atad1b (ENSSGRG00000030002)	ENSSGRG00000029994	rnls (ENSSGRG00000029989)	lipf (ENSSGRG00000029748) #32	ankrd22 (ENSSGRG00000029988) #37	STAMBPL1 (ENSSGRG00000029431) #36	acta2 (ENSSGRG00000029427)	ch25h (ENSSGRG00000029426) #33	ifit10 (ENSSGRG00000029424) #26	slc16a12b (ENSSGRG00000029422) #25	pank1b (ENSSGRG00000029401) #24	HTR7 (ENSSGRG00000029398) #22	ENSSGRG00000029397 #23	ENSSGRG00000029396	rpp30 (ENSSGRG00000029376) #21	pcgf5b (ENSSGRG00000029372) #19	HECTD2 (ENSSGRG00000029245) #18	MPP3 (ENSSGRG00000029225)	muc13b (ENSSGRG00000029223)	znf281b (ENSSGRG00000029222)
Goldfish	MODERN SPECIES	30	ENSCARG00000009655	atad1b (ENSCARG00000009611)	ptenb (ENSCARG00000009539)	rnls (ENSCARG00000009503)	lipf (ENSCARG00000007830) #32	STAMBPL1 (ENSCARG00000007744) #36	acta2 (ENSCARG00000007728)	ch25h (ENSCARG00000007722) #33	ch25h (ENSCARG00000007714) #33	ifit10 (ENSCARG00000007711) #26	papss2b (ENSCARG00000007059)	ifit10 (ENSCARG00000007012) #26	ifit11 (ENSCARG00000007006) #26	slc16a12b (ENSCARG00000006992) #25	pank1b (ENSCARG00000006974) #24	ENSCARG00000006967 #22	ENSCARG00000006909 #23	rpp30 (ENSCARG00000006868) #21	ENSCARG00000006836	pcgf5b (ENSCARG00000006827) #19	ENSCARG00000006824	HECTD2 (ENSCARG00000006755) #18	ppp1r3cb (ENSCARG00000006741) #17	MPP3 (ENSCARG00000006667)	ENSCARG00000006653	muc13b (ENSCARG00000006619)	znf281b (ENSCARG00000006582)	ENSCARG00000006572	ENSCARG00000006564	ENSCARG00000006554	ENSCARG00000006378
Zebrafish	MODERN SPECIES	3	ifit12 (ENSDARG00000090977) #26	slc16a12b (ENSDARG00000089885) #25	pank1b (ENSDARG00000010098) #24	zgc:174153 (ENSDARG00000079376)	zgc:174855 (ENSDARG00000094559)	si:dkey-26g8.5 (ENSDARG00000089750)	ENSDARG00000095072	si:dkey-269i1.4 (ENSDARG00000095744)	zgc:174154 (ENSDARG00000075527)	MGC174155 (ENSDARG00000087651)	wu:fa26c03 (ENSDARG00000074306)	ENSDARG00000089806	ENSDARG00000039173	si:dkey-239j18.2 (ENSDARG00000095254)	ENSDARG00000100833	HTR7 (ENSDARG00000099854) #22	ENSDARG00000040110 #23	rpp30 (ENSDARG00000027428) #21	ankrd1b (ENSDARG00000076192) #20	pcgf5b (ENSDARG00000052388) #19	HECTD2 (ENSDARG00000061194) #18	ppp1r3cb (ENSDARG00000014554) #17	MPP3 (ENSDARG00000062667)	ENSDARG00000007906	muc13b (ENSDARG00000079647)	znf281b (ENSDARG00000035910)	ENSDARG00000062672	ENSDARG00000102056	nmt1b (ENSDARG00000057206)	PLCD3 (ENSDARG00000079572)	acbd4 (ENSDARG00000027070)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.a.b #22
Denticle herring	MODERN SPECIES	94										SMOC2 (ENSDCDG00000016624)	dact2 (ENSDCDG00000016642)	ablim1a (ENSDCDG00000016683)	SLC16A12 (ENSDCDG00000019725) #25	pank1a (ENSDCDG00000019730) #24	zgc:65997 (ENSDCDG00000019735)	ENSDCDG00000019737 #22
Elephant shark	MODERN SPECIES	1488	sgms1a (ENSCMIG00000019185)	minpp1b (ENSCMIG00000019184)	papss2b (ENSCMIG00000019164)	atad1b (ENSCMIG00000019152)	ptenb (ENSCMIG00000019147)	rnls (ENSCMIG00000019143)	lipf (ENSCMIG00000019110) #32	ankrd22 (ENSCMIG00000019064) #37	STAMBPL1 (ENSCMIG00000019048) #36	acta2 (ENSCMIG00000018932) #35	ENSCMIG00000018889 #34	ch25h (ENSCMIG00000018886) #33	ENSCMIG00000018884 #26	slc16a12b (ENSCMIG00000018882) #25	pank1b (ENSCMIG00000018879) #24	HTR7 (ENSCMIG00000018875) #22	ENSCMIG00000018873 #23	ENSCMIG00000018870 #23	ENSCMIG00000018867 #23	rpp30 (ENSCMIG00000018865) #21	ankrd1b (ENSCMIG00000018862) #20	pcgf5b (ENSCMIG00000018860) #19	HECTD2 (ENSCMIG00000018856) #18	ppp1r3cb (ENSCMIG00000018854) #17	TNKS2 (ENSCMIG00000018779) #16	ENSCMIG00000018733	ENSCMIG00000018731	TBC1D12 (ENSCMIG00000018661)	noc3l (ENSCMIG00000018543)	plce1 (ENSCMIG00000018450)	SLC35G1 (ENSCMIG00000018420)
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.b ##22
Actinopterygii	ANCESTRAL SPECIES	942																ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b
Neopterygii	ANCESTRAL SPECIES	104					ENSGT00940000157037.b.a	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00390000000134.b	ENSGT00940000159875	ENSGT00940000156888	ENSGT00390000003458	ENSGT00940000156716	ENSGT00940000154115.d	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000164380.b	ENSGT00940000156239	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00390000016333	ENSGT00940000153139.B.a	ENSGT00530000063555.B	ENSGT00940000159868.b	ENSGT00940000156168.B	ENSGT00940000154078.a.b	ENSGT00940000153710.a ##36	ENSGT00940000155847	ENSGT00940000164699
Osteoglossocephalai	ANCESTRAL SPECIES	492														ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b
Clupeocephala	ANCESTRAL SPECIES	29														ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00980000199539	ENSGT00900000141073	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00940000160867	ENSGT00390000013037	ENSGT00390000013892	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00510000047648.b.b.b	ENSGT00940000153499.b.a	ENSGT00940000162544.c.b	ENSGT00390000008853	ENSGT00940000165184	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00980000199539	ENSGT00900000141073	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977
Acanthomorphata	ANCESTRAL SPECIES	46				ENSGT00940000175330	ENSGT00510000047648.b.b.b	ENSGT00510000047648.b.a	ENSGT00940000153499.b.a	ENSGT00940000162544.c.b	ENSGT00390000008853	ENSGT00940000165184	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00980000199539	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00390000012733
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000153974.B	ENSGT00940000157488.g	ENSGT00940000165233	ENSGT00940000153745.a.a	ENSGT00390000004149	ENSGT00940000160325.b	ENSGT00730000111371	ENSGT00940000165973	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733
Pinecone sodierfish	MODERN SPECIES	23	ogfod2 (ENSMMDG00005013355)	SLC4A5 (ENSMMDG00005013372)	zgc:110329 (ENSMMDG00005013455)	TACR1 (ENSMMDG00005013458)	ncaph (ENSMMDG00005013473)	vamp8 (ENSMMDG00005013486)	vamp5 (ENSMMDG00005013489)	ENSMMDG00005013492	tmem150aa (ENSMMDG00005013498)	kcnv2b (ENSMMDG00005013499)	ENSMMDG00005013501	rbp4l (ENSMMDG00005013504)	IDUA (ENSMMDG00005013510)	tnksb (ENSMMDG00005013528)	piwil2 (ENSMMDG00005013665)	ENSMMDG00005017020 ##22	atad1a (ENSMMDG00005017109)	GALNT9 (ENSMMDG00005017117)	ENSMMDG00005017121	FBRSL1 (ENSMMDG00005017124)	chfr (ENSMMDG00005017160)	golga3 (ENSMMDG00005018024)	ankle2 (ENSMMDG00005019731)	ENSMMDG00005019737	pgam5 (ENSMMDG00005019739)	zdhhc8b (ENSMMDG00005019741)	ranbp1 (ENSMMDG00005019746)	trmt2a (ENSMMDG00005019787)	ENSMMDG00005020063	dgcr8 (ENSMMDG00005020080)	tango2 (ENSMMDG00005020494)
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00390000012331	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733
Tiger tail seahorse	MODERN SPECIES	341	ube2d4 (ENSHCOG00000002130)	dbnlb (ENSHCOG00000002171)	arid5a (ENSHCOG00000002194)	ppp1r3c2b (ENSHCOG00000002196) ##17	PHYHIP (ENSHCOG00000002210)	gins4 (ENSHCOG00000002215)	POLR3D (ENSHCOG00000002228)	GPAT4 (ENSHCOG00000002261)	inpp5l (ENSHCOG00000002294)	nkx6.3 (ENSHCOG00000002306)	ENSHCOG00000002320	sorbs3 (ENSHCOG00000002351)	pdlim2 (ENSHCOG00000002369)	tnksb (ENSHCOG00000000804)	piwil2 (ENSHCOG00000002903)	ENSHCOG00000003008 ##22	atad1a (ENSHCOG00000003027)	GALNT9 (ENSHCOG00000003062)	ENSHCOG00000003084	chfr (ENSHCOG00000003101)	golga3 (ENSHCOG00000003156)	ankle2 (ENSHCOG00000003182)	pgam5 (ENSHCOG00000003196)	zdhhc8b (ENSHCOG00000003233)	ranbp1 (ENSHCOG00000003250)	ENSHCOG00000003260	trmt2a (ENSHCOG00000003282)	dgcr8 (ENSHCOG00000003315)	tango2 (ENSHCOG00000003325)	arvcfb (ENSHCOG00000003773)	TXNRD2 (ENSHCOG00000003919)
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01080000258273	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733
Oryzias	ANCESTRAL SPECIES	7	ENSGT00390000010771	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00390000010771	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00980000199539	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Indian medaka	MODERN SPECIES	11	pop5 (ENSOMEG00000017643)	unc119.1 (ENSOMEG00000017712)	rnf10 (ENSOMEG00000017788)	ENSOMEG00000017825	CRYBB3 (ENSOMEG00000017866)	crybb2 (ENSOMEG00000000451)	ctu1 (ENSOMEG00000017921)	ENSOMEG00000017955	rnf181 (ENSOMEG00000017985)	tmem150aa (ENSOMEG00000018042)	kcnv2b (ENSOMEG00000018065)	ENSOMEG00000018082	IDUA (ENSOMEG00000018115)	tnksb (ENSOMEG00000018326)	piwil2 (ENSOMEG00000018436)	ENSOMEG00000018468 ##22	atad1a (ENSOMEG00000018502)	GALNT9 (ENSOMEG00000018576)	ENSOMEG00000018601	ENSOMEG00000018618	FBRSL1 (ENSOMEG00000018810)	chfr (ENSOMEG00000018886)	golga3 (ENSOMEG00000018936)	ankle2 (ENSOMEG00000018985)	pgam5 (ENSOMEG00000019004)	zdhhc8b (ENSOMEG00000019020)	ranbp1 (ENSOMEG00000019068)	ENSOMEG00000019081	trmt2a (ENSOMEG00000019101)	dgcr8 (ENSOMEG00000019137)	tango2 (ENSOMEG00000019244)
Javanese ricefish	MODERN SPECIES	23	zgc:162025 (ENSOJAG00000022222)	unc119.1 (ENSOJAG00000022233)	pop5 (ENSOJAG00000022245)	rnf10 (ENSOJAG00000022251)	ENSOJAG00000022283	CRYBB3 (ENSOJAG00000022304)	crybb2 (ENSOJAG00000022334)	PXN (ENSOJAG00000022346)	ENSOJAG00000022371	rnf181 (ENSOJAG00000022374)	tmem150aa (ENSOJAG00000022385)	ENSOJAG00000022394	KCNV2 (ENSOJAG00000022398)	IDUA (ENSOJAG00000022409)	piwil2 (ENSOJAG00000022850)	ENSOJAG00000023522 ##22	atad1a (ENSOJAG00000023543)	GALNT9 (ENSOJAG00000023554)	ENSOJAG00000023596	ENSOJAG00000023616	chfr (ENSOJAG00000023626)	golga3 (ENSOJAG00000023647)	ankle2 (ENSOJAG00000023682)	pgam5 (ENSOJAG00000023684)	zdhhc8b (ENSOJAG00000023689)	ranbp1 (ENSOJAG00000023696)	trmt2a (ENSOJAG00000023704)	ENSOJAG00000023712	dgcr8 (ENSOJAG00000023713)	tango2 (ENSOJAG00000023716)	arvcfb (ENSOJAG00000023724)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000153818.a.b.a.a	ENSGT00390000010771	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00980000199539	ENSGT00390000015977	ENSGT00390000012733	ENSGT01020000230579.C.b.b.a.a.a
Japanese Medaka HdrR	MODERN SPECIES	23	ENSORLG00000014721	unc119.1 (ENSORLG00000014735)	pop5 (ENSORLG00000014745)	rnf10 (ENSORLG00000014788)	ENSORLG00000024909	CRYBB3 (ENSORLG00000014815)	crybb2 (ENSORLG00000014827)	ctu1 (ENSORLG00000014831)	ENSORLG00000014858	rnf181 (ENSORLG00000014874)	tmem150aa (ENSORLG00000014883)	kcnv2b (ENSORLG00000014890)	ENSORLG00000020520	IDUA (ENSORLG00000021913)	tnksb (ENSORLG00000029690)	ENSORLG00000014894 ##22	ENSORLG00000028420	ENSORLG00000025095	atad1a (ENSORLG00000014942)	GALNT9 (ENSORLG00000025508)	ENSORLG00000022168	ENSORLG00000028188	ENSORLG00000028265	chfr (ENSORLG00000014995)	golga3 (ENSORLG00000015012)	ankle2 (ENSORLG00000015038)	pgam5 (ENSORLG00000015061)	ENSORLG00000025747	zdhhc8b (ENSORLG00000015107)	ENSORLG00000026272	ranbp1 (ENSORLG00000021996)
Chinese medaka	MODERN SPECIES	928														tnksb (ENSOSIG00000017200)	IDUA (ENSOSIG00000018623)	ENSOSIG00000018824 ##22
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Aplocheiloidei	ANCESTRAL SPECIES	20	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01080000258273	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Mangrove rivulus	MODERN SPECIES	30	unc119.1 (ENSKMAG00000011183)	ENSKMAG00000011158	rnf10 (ENSKMAG00000011102)	ENSKMAG00000011065	CRYBB3 (ENSKMAG00000011048)	crybb2 (ENSKMAG00000011015)	ctu1 (ENSKMAG00000010991)	PXN (ENSKMAG00000010928)	rnf181 (ENSKMAG00000010886)	tmem150aa (ENSKMAG00000010857)	kcnv2b (ENSKMAG00000010845)	atp5meb (ENSKMAG00000010828)	IDUA (ENSKMAG00000010797)	tnksb (ENSKMAG00000010617)	piwil2 (ENSKMAG00000009865)	ENSKMAG00000009659 ##22	ENSKMAG00000009634	atad1a (ENSKMAG00000009590)	GALNT9 (ENSKMAG00000009543)	FBRSL1 (ENSKMAG00000009499)	chfr (ENSKMAG00000009479)	golga3 (ENSKMAG00000009360)	ankle2 (ENSKMAG00000009309)	pgam5 (ENSKMAG00000009287)	ENSKMAG00000009272	zdhhc8b (ENSKMAG00000009250)	ranbp1 (ENSKMAG00000009217)	ENSKMAG00000009210	trmt2a (ENSKMAG00000009161)	dgcr8 (ENSKMAG00000009087)	tango2 (ENSKMAG00000009062)
Turquoise killifish	MODERN SPECIES	1627	zgc:162025 (ENSNFUG00015007777)	UNC119.1 (ENSNFUG00015007771)	ENSNFUG00015007758	rnf10 (ENSNFUG00015007751)	KIAA1671 (ENSNFUG00015007745)	CRYBB3 (ENSNFUG00015007736)	CRYBB2 (ENSNFUG00015007729)	ctu1 (ENSNFUG00015007725)	PXN (ENSNFUG00015007699)	rnf181 (ENSNFUG00015007684)	TMEM150A (ENSNFUG00015007676)	kcnv2b (ENSNFUG00015007673)	ENSNFUG00015007669	IDUA (ENSNFUG00015007431)	tnksb (ENSNFUG00015007323)	Nfu_g_1_009090 (ENSNFUG00015007302) ##22	atad1a (ENSNFUG00015007294)	ENSNFUG00015007291	GALNT9 (ENSNFUG00015007281)	ENSNFUG00015007269	ENSNFUG00015007266	ENSNFUG00015007260	FBRSL1 (ENSNFUG00015007151)	chfr (ENSNFUG00015007062)	golga3 (ENSNFUG00015006369)	ANKLE2 (ENSNFUG00015006277)	PGAM5 (ENSNFUG00015006260)	ENSNFUG00015006252	ZDHHC8B (ENSNFUG00015006222)	ranbp1 (ENSNFUG00015006202)	trmt2a (ENSNFUG00015006052)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Poecilia	ANCESTRAL SPECIES	3	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
NAME_6	ANCESTRAL SPECIES	9	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Sailfin molly	MODERN SPECIES	8	pop5 (ENSPLAG00000014070)	rnf10 (ENSPLAG00000000329)	ENSPLAG00000014131	CRYBB3 (ENSPLAG00000014144)	crybb2 (ENSPLAG00000014195)	ctu1 (ENSPLAG00000014198)	PXN (ENSPLAG00000014203)	rnf181 (ENSPLAG00000014214)	tmem150aa (ENSPLAG00000014248)	kcnv2b (ENSPLAG00000014274)	ENSPLAG00000000333	rbp4l (ENSPLAG00000014357)	IDUA (ENSPLAG00000014446)	tnksb (ENSPLAG00000014512)	piwil2 (ENSPLAG00000014526)	ENSPLAG00000014537 ##22	atad1a (ENSPLAG00000014591)
Amazon molly	MODERN SPECIES	333	unc119.1 (ENSPFOG00000013023)	pop5 (ENSPFOG00000013000)	rnf10 (ENSPFOG00000012846)	ENSPFOG00000012833	CRYBB3 (ENSPFOG00000022020)	crybb2 (ENSPFOG00000012793)	ctu1 (ENSPFOG00000012786)	PXN (ENSPFOG00000012728)	rnf181 (ENSPFOG00000012689)	tmem150aa (ENSPFOG00000012647)	kcnv2b (ENSPFOG00000012639)	rbp4l (ENSPFOG00000012603)	IDUA (ENSPFOG00000012454)	tnksb (ENSPFOG00000012237)	piwil2 (ENSPFOG00000012110)	ENSPFOG00000012093 ##22	atad1a (ENSPFOG00000012028)	GALNT9 (ENSPFOG00000011780)	FBRSL1 (ENSPFOG00000011627)	chfr (ENSPFOG00000011481)	ENSPFOG00000011465	golga3 (ENSPFOG00000011295)	ankle2 (ENSPFOG00000011216)	pgam5 (ENSPFOG00000011166)	zdhhc8b (ENSPFOG00000011059)	ranbp1 (ENSPFOG00000011003)	trmt2a (ENSPFOG00000010903)	dgcr8 (ENSPFOG00000010796)	tango2 (ENSPFOG00000010604)	arvcfb (ENSPFOG00000010166)	TXNRD2 (ENSPFOG00000009809)
Guppy	MODERN SPECIES	461	rnf10 (ENSPREG00000020128)	ENSPREG00000020110	CRYBB3 (ENSPREG00000020096)	crybb2 (ENSPREG00000020083)	ctu1 (ENSPREG00000020068)	ENSPREG00000020050	rnf181 (ENSPREG00000020024)	tmem150aa (ENSPREG00000020010)	kcnv2b (ENSPREG00000019994)	ENSPREG00000019984	rbp4l (ENSPREG00000019933)	IDUA (ENSPREG00000019874)	tnksb (ENSPREG00000019745)	ENSPREG00000019721	piwil2 (ENSPREG00000019700)	ENSPREG00000019681 ##22	atad1a (ENSPREG00000019659)	GALNT9 (ENSPREG00000019615)	FBRSL1 (ENSPREG00000019349)	chfr (ENSPREG00000019246)	golga3 (ENSPREG00000019188)	ankle2 (ENSPREG00000019167)	pgam5 (ENSPREG00000019141)	zdhhc8b (ENSPREG00000019009)	ranbp1 (ENSPREG00000018948)	ENSPREG00000018939	trmt2a (ENSPREG00000018920)	dgcr8 (ENSPREG00000018877)	tango2 (ENSPREG00000018846)	arvcfb (ENSPREG00000018675)	TXNRD2 (ENSPREG00000018592)
Platyfish	MODERN SPECIES	3	ENSXMAG00000003508	rnf10 (ENSXMAG00000025135)	ENSXMAG00000021829	CRYBB3 (ENSXMAG00000002938)	crybb2 (ENSXMAG00000002930)	ctu1 (ENSXMAG00000002928)	ENSXMAG00000002915	ENSXMAG00000021618	tmem150aa (ENSXMAG00000019069)	kcnv2b (ENSXMAG00000015430)	ENSXMAG00000024759	rbp4l (ENSXMAG00000015428)	IDUA (ENSXMAG00000026675)	tnksb (ENSXMAG00000004961)	piwil2 (ENSXMAG00000005034)	ENSXMAG00000017959 ##22	atad1a (ENSXMAG00000017961)	GALNT9 (ENSXMAG00000000087)	ENSXMAG00000025475	ENSXMAG00000024472	FBRSL1 (ENSXMAG00000022481)	chfr (ENSXMAG00000002473)	golga3 (ENSXMAG00000002470)	ankle2 (ENSXMAG00000002465)	pgam5 (ENSXMAG00000002459)	zdhhc8b (ENSXMAG00000002450)	ranbp1 (ENSXMAG00000002443)	trmt2a (ENSXMAG00000002434)	ENSXMAG00000022575	dgcr8 (ENSXMAG00000002426)	tango2 (ENSXMAG00000002411)
NAME_4	ANCESTRAL SPECIES	155	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f
Mummichog	MODERN SPECIES	471	pop5 (ENSFHEG00000022341)	rnf10 (ENSFHEG00000000551)	ENSFHEG00000022245	CRYBB3 (ENSFHEG00000022241)	crybb2 (ENSFHEG00000022216)	ctu1 (ENSFHEG00000022201)	PXN (ENSFHEG00000022175)	rnf181 (ENSFHEG00000022152)	tmem150aa (ENSFHEG00000022134)	kcnv2b (ENSFHEG00000022115)	IDUA (ENSFHEG00000022103)	ENSFHEG00000022094	rbp4l (ENSFHEG00000022079)	tnksb (ENSFHEG00000022069)	piwil2 (ENSFHEG00000022000)	ENSFHEG00000021985 ##22
Sheepshead minnow	MODERN SPECIES	309												ENSCVAG00000022962	ENSCVAG00000022950	ENSCVAG00000022941	piwil2 (ENSCVAG00000022932)	ENSCVAG00000022884 ##22	atad1a (ENSCVAG00000000585)	GALNT9 (ENSCVAG00000022681)	ENSCVAG00000022647
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Cichlidae	ANCESTRAL SPECIES	29	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Pseudocrenilabrinae	ANCESTRAL SPECIES	26	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000176261	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00940000155794.h.g.b.a.a.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	28	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000176261	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00940000155794.h.g.b.a.a.a.a.b	ENSGT00940000166440	ENSGT01080000257442
Haplochromini	ANCESTRAL SPECIES	30	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000176261	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709.gb.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00940000155794.h.g.b.a.a.a.a.b	ENSGT00940000166440	ENSGT01080000257442
Burton s mouthbrooder	MODERN SPECIES	424	ENSHBUG00000011718	rnf10 (ENSHBUG00000011694)	ENSHBUG00000011682	CRYBB3 (ENSHBUG00000011673)	crybb2 (ENSHBUG00000011657)	ctu1 (ENSHBUG00000011647)	ENSHBUG00000011632	ENSHBUG00000011612	tmem150aa (ENSHBUG00000011590)	kcnv2b (ENSHBUG00000011565)	ENSHBUG00000011538	rbp4l (ENSHBUG00000011530)	IDUA (ENSHBUG00000011513)	tnksb (ENSHBUG00000011486)	piwil2 (ENSHBUG00000011225)	ENSHBUG00000009080 ##22	atad1a (ENSHBUG00000009068)	GALNT9 (ENSHBUG00000009025)	FBRSL1 (ENSHBUG00000008969)	chfr (ENSHBUG00000008924)	golga3 (ENSHBUG00000008842)	ankle2 (ENSHBUG00000008721)	pgam5 (ENSHBUG00000001028)	zdhhc8b (ENSHBUG00000008678)	ranbp1 (ENSHBUG00000008666)	trmt2a (ENSHBUG00000008621)	ENSHBUG00000008566	dgcr8 (ENSHBUG00000008555)
Haplochromini_A	ANCESTRAL SPECIES	32	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000176261	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709.gb.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00940000155794.h.g.b.a.a.a.a.b	ENSGT00940000166440	ENSGT01080000257442
P. nyererei	MODERN SPECIES	348	pop5 (ENSPNYG00000002679)	rnf10 (ENSPNYG00000002711)	ENSPNYG00000002740	CRYBB3 (ENSPNYG00000002791)	crybb2 (ENSPNYG00000002813)	ctu1 (ENSPNYG00000002842)	PXN (ENSPNYG00000002855)	ENSPNYG00000002875	tmem150aa (ENSPNYG00000002898)	kcnv2b (ENSPNYG00000002935)	ENSPNYG00000002946	rbp4l (ENSPNYG00000002963)	IDUA (ENSPNYG00000003054)	tnksb (ENSPNYG00000003131)	piwil2 (ENSPNYG00000003305)	ENSPNYG00000003844 ##22	atad1a (ENSPNYG00000003867)	GALNT9 (ENSPNYG00000003955)	FBRSL1 (ENSPNYG00000003992)	chfr (ENSPNYG00000004029)	golga3 (ENSPNYG00000004058)	ankle2 (ENSPNYG00000004119)	pgam5 (ENSPNYG00000004138)	zdhhc8b (ENSPNYG00000004217)	ranbp1 (ENSPNYG00000004369)	trmt2a (ENSPNYG00000004441)	ENSPNYG00000004480	dgcr8 (ENSPNYG00000004486)	ENSPNYG00000004549	ENSPNYG00000004753	ENSPNYG00000004761
Haplochromini_B	ANCESTRAL SPECIES	44	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000176261	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709.gb.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00940000155794.h.g.b.a.a.a.a.b	ENSGT00940000166440	ENSGT01080000257442
Zebra mbuna	MODERN SPECIES	1094	ENSMZEG00005000069	rnf10 (ENSMZEG00005018870)	ENSMZEG00005018863	CRYBB3 (ENSMZEG00005018856)	crybb2 (ENSMZEG00005018850)	ctu1 (ENSMZEG00005018846)	ENSMZEG00005018837	ENSMZEG00005018828	tmem150aa (ENSMZEG00005018824)	kcnv2b (ENSMZEG00005018820)	atp5meb (ENSMZEG00005018816)	rbp4l (ENSMZEG00005018812)	IDUA (ENSMZEG00005018805)	tnksb (ENSMZEG00005018767)	piwil2 (ENSMZEG00005018757)	ENSMZEG00005018751 ##22	atad1a (ENSMZEG00005018741)	GALNT9 (ENSMZEG00005018732)	ENSMZEG00005018719	chfr (ENSMZEG00005018711)	golga3 (ENSMZEG00005018696)	ankle2 (ENSMZEG00005018692)	pgam5 (ENSMZEG00005018680)	zdhhc8b (ENSMZEG00005018673)	ranbp1 (ENSMZEG00005018667)	ENSMZEG00005018664	ENSMZEG00005018662	trmt2a (ENSMZEG00005018654)	dgcr8 (ENSMZEG00005018646)	ggt5a (ENSMZEG00005018640)	arrdc1a (ENSMZEG00005018638)
Eastern happy	MODERN SPECIES	3	ENSACLG00000021131	rnf10 (ENSACLG00000021079)	ENSACLG00000021038	CRYBB3 (ENSACLG00000021014)	crybb2 (ENSACLG00000021006)	ctu1 (ENSACLG00000020990)	PXN (ENSACLG00000020934)	ENSACLG00000020903	tmem150aa (ENSACLG00000020889)	kcnv2b (ENSACLG00000020882)	ENSACLG00000020866	rbp4l (ENSACLG00000020853)	IDUA (ENSACLG00000020794)	tnksb (ENSACLG00000020662)	piwil2 (ENSACLG00000020551)	ENSACLG00000020526 ##22	atad1a (ENSACLG00000020464)	GALNT9 (ENSACLG00000020391)	ENSACLG00000020329	ENSACLG00000020300	ENSACLG00000020291	FBRSL1 (ENSACLG00000020166)	chfr (ENSACLG00000020092)	golga3 (ENSACLG00000020032)	ankle2 (ENSACLG00000019981)	pgam5 (ENSACLG00000019950)	zdhhc8b (ENSACLG00000019931)	ranbp1 (ENSACLG00000019891)	ENSACLG00000019871	ENSACLG00000019865	trmt2a (ENSACLG00000019826)
Lyretail cichlid	MODERN SPECIES	430	zgc:162025 (ENSNBRG00000000885)	unc119.1 (ENSNBRG00000000973)	ENSNBRG00000001020	rnf10 (ENSNBRG00000001054)	ENSNBRG00000001058	CRYBB3 (ENSNBRG00000001073)	crybb2 (ENSNBRG00000001099)	ctu1 (ENSNBRG00000001116)	PXN (ENSNBRG00000001155)	ENSNBRG00000001200	tmem150aa (ENSNBRG00000001215)	kcnv2b (ENSNBRG00000001243)	ENSNBRG00000001249	rbp4l (ENSNBRG00000001260)	tnksb (ENSNBRG00000001274)	ENSNBRG00000001440 ##22	atad1a (ENSNBRG00000001459)	GALNT9 (ENSNBRG00000001507)	FBRSL1 (ENSNBRG00000001555)	ENSNBRG00000001633	chfr (ENSNBRG00000001650)	golga3 (ENSNBRG00000001691)	ankle2 (ENSNBRG00000001971)	pgam5 (ENSNBRG00000002069)	zdhhc8b (ENSNBRG00000002130)	ranbp1 (ENSNBRG00000002349)	trmt2a (ENSNBRG00000002379)	ENSNBRG00000002404	dgcr8 (ENSNBRG00000002412)	ggt5a (ENSNBRG00000002481)	arrdc1a (ENSNBRG00000002533)
Nile tilapia	MODERN SPECIES	3	rnf10 (ENSONIG00000011167)	ENSONIG00000025517	ENSONIG00000036057	CRYBB3 (ENSONIG00000011163)	crybb2 (ENSONIG00000011162)	ctu1 (ENSONIG00000011161)	PXN (ENSONIG00000011157)	ENSONIG00000011155	tmem150aa (ENSONIG00000011154)	kcnv2b (ENSONIG00000011153)	ENSONIG00000033968	rbp4l (ENSONIG00000011148)	IDUA (ENSONIG00000011141)	tnksb (ENSONIG00000011131)	piwil2 (ENSONIG00000011121)	ENSONIG00000011120 ##22	atad1a (ENSONIG00000011114)	GALNT9 (ENSONIG00000011110)	FBRSL1 (ENSONIG00000011109)	chfr (ENSONIG00000011102)	golga3 (ENSONIG00000011095)	ankle2 (ENSONIG00000011090)	pgam5 (ENSONIG00000011088)	zdhhc8b (ENSONIG00000011086)	ranbp1 (ENSONIG00000011083)	trmt2a (ENSONIG00000036446)	ENSONIG00000031351	dgcr8 (ENSONIG00000011072)	ggt5a (ENSONIG00000011068)	ggt5a (ENSONIG00000009607)	ENSONIG00000041569
Midas cichlid	MODERN SPECIES	1060	pop5 (ENSACIG00000018362)	rnf10 (ENSACIG00000018417)	ENSACIG00000018476	CRYBB3 (ENSACIG00000018497)	crybb2 (ENSACIG00000018514)	ctu1 (ENSACIG00000018530)	PXN (ENSACIG00000018546)	rnf181 (ENSACIG00000018561)	tmem150aa (ENSACIG00000018576)	kcnv2b (ENSACIG00000018595)	ENSACIG00000018608	rbp4l (ENSACIG00000018696)	IDUA (ENSACIG00000018733)	tnksb (ENSACIG00000018757)	piwil2 (ENSACIG00000018881)	ENSACIG00000019563 ##22	atad1a (ENSACIG00000019573)	GALNT9 (ENSACIG00000019605)	FBRSL1 (ENSACIG00000019628)	chfr (ENSACIG00000019655)	golga3 (ENSACIG00000019705)	ankle2 (ENSACIG00000019768)	pgam5 (ENSACIG00000019833)	zdhhc8b (ENSACIG00000019851)	ranbp1 (ENSACIG00000019883)	trmt2a (ENSACIG00000020070)	ENSACIG00000020093	dgcr8 (ENSACIG00000020103)	tango2 (ENSACIG00000020140)
Pomacentridae	ANCESTRAL SPECIES		ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000156599.e.a	ENSGT00940000160709.db.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709.db.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Amphiprion	ANCESTRAL SPECIES	18	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.f	ENSGT00940000160709.db.b	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Clown anemonefish	MODERN SPECIES	1000												rbp4l (ENSAOCG00000010170)	IDUA (ENSAOCG00000010091)	tnksb (ENSAOCG00000010070)	piwil2 (ENSAOCG00000009899)	ENSAOCG00000009881 ##22	atad1a (ENSAOCG00000009872)	GALNT9 (ENSAOCG00000009830)	ENSAOCG00000009797	chfr (ENSAOCG00000009754)	golga3 (ENSAOCG00000009722)	ankle2 (ENSAOCG00000009612)	pgam5 (ENSAOCG00000002007)	zdhhc8b (ENSAOCG00000009558)	ranbp1 (ENSAOCG00000009542)	trmt2a (ENSAOCG00000009497)	dgcr8 (ENSAOCG00000009444)	tango2 (ENSAOCG00000009385)	arvcfb (ENSAOCG00000009333)	TXNRD2 (ENSAOCG00000009134)	gnb1l (ENSAOCG00000000557)
Orange clownfish	MODERN SPECIES	19	unc119.1 (ENSAPEG00000006761)	rnf10 (ENSAPEG00000006746)	ENSAPEG00000006725	CRYBB3 (ENSAPEG00000006711)	crybb2 (ENSAPEG00000006696)	ctu1 (ENSAPEG00000006687)	PXN (ENSAPEG00000006617)	rnf181 (ENSAPEG00000006575)	tmem150aa (ENSAPEG00000006560)	kcnv2b (ENSAPEG00000006553)	ENSAPEG00000006535	rbp4l (ENSAPEG00000006525)	IDUA (ENSAPEG00000006508)	tnksb (ENSAPEG00000006372)	piwil2 (ENSAPEG00000005521)	ENSAPEG00000005466 ##22	atad1a (ENSAPEG00000005410)	GALNT9 (ENSAPEG00000005360)	FBRSL1 (ENSAPEG00000005314)	chfr (ENSAPEG00000005284)	golga3 (ENSAPEG00000005160)	ankle2 (ENSAPEG00000005145)	pgam5 (ENSAPEG00000005122)	zdhhc8b (ENSAPEG00000005113)	ranbp1 (ENSAPEG00000005067)	ENSAPEG00000005058	trmt2a (ENSAPEG00000005005)	dgcr8 (ENSAPEG00000004916)	tango2 (ENSAPEG00000004865)	arvcfb (ENSAPEG00000004767)	TXNRD2 (ENSAPEG00000004544)
Spiny chromis	MODERN SPECIES	1326																ENSAPOG00000019113 ##22	atad1a (ENSAPOG00000019094)
Bicolor damselfish	MODERN SPECIES	1117															piwil2 (ENSSPAG00000019925)	ENSSPAG00000019912 ##22	atad1a (ENSSPAG00000019888)	ENSSPAG00000019870
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00390000012331	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00390000012331	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Carangaria	ANCESTRAL SPECIES	9	ENSGT00390000012331	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00390000012331	ENSGT00390000001731	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Turbot	MODERN SPECIES	21	unc119.1 (ENSSMAG00000009069)	ENSSMAG00000018868	ENSSMAG00000018893	ENSSMAG00000018913	ENSSMAG00000018928	CRYBB2 (ENSSMAG00000018937)	CTU1 (ENSSMAG00000018958)	ENSSMAG00000018961	ENSSMAG00000030428	ENSSMAG00000019024	kcnv2b (ENSSMAG00000019095)	ENSSMAG00000019120	ENSSMAG00000019151	tnksb (ENSSMAG00000019175)	piwil2 (ENSSMAG00000019263)	ENSSMAG00000019327 ##22	atad1a (ENSSMAG00000019349)	ENSSMAG00000019360	ENSSMAG00000019388	chfr (ENSSMAG00000019467)	ENSSMAG00000025006	golga3 (ENSSMAG00000019507)	ANKLE2 (ENSSMAG00000019562)	pgam5 (ENSSMAG00000019576)	ENSSMAG00000019597	ENSSMAG00000019599	ENSSMAG00000019631	TRMT2A (ENSSMAG00000019650)	ENSSMAG00000019674	DGCR8 (ENSSMAG00000019677)	TANGO2 (ENSSMAG00000019725)
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Seriola	ANCESTRAL SPECIES	7	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Greater amberjack	MODERN SPECIES	6	rnf10 (ENSSDUG00000001298)	ENSSDUG00000001323	CRYBB3 (ENSSDUG00000001336)	crybb2 (ENSSDUG00000001364)	ctu1 (ENSSDUG00000001430)	PXN (ENSSDUG00000001436)	rnf181 (ENSSDUG00000001453)	tmem150aa (ENSSDUG00000001470)	kcnv2b (ENSSDUG00000001483)	atp5meb (ENSSDUG00000001500)	rbp4l (ENSSDUG00000001514)	IDUA (ENSSDUG00000001577)	tnksb (ENSSDUG00000001625)	ENSSDUG00000001826	piwil2 (ENSSDUG00000001859)	ENSSDUG00000001939 ##22	atad1a (ENSSDUG00000001959)	GALNT9 (ENSSDUG00000002014)	FBRSL1 (ENSSDUG00000002083)	chfr (ENSSDUG00000002210)	golga3 (ENSSDUG00000002272)	ankle2 (ENSSDUG00000002333)	pgam5 (ENSSDUG00000002342)	zdhhc8b (ENSSDUG00000002363)	ranbp1 (ENSSDUG00000002380)	ENSSDUG00000002427	trmt2a (ENSSDUG00000002436)	dgcr8 (ENSSDUG00000002478)	tango2 (ENSSDUG00000002545)	arvcfb (ENSSDUG00000002610)	TXNRD2 (ENSSDUG00000002755)
Yellowtail amberjack	MODERN SPECIES	3232	pop5 (ENSSLDG00000017031)	rnf10 (ENSSLDG00000017049)	ENSSLDG00000017069	CRYBB3 (ENSSLDG00000017099)	crybb2 (ENSSLDG00000017116)	ctu1 (ENSSLDG00000017124)	ENSSLDG00000017158	rnf181 (ENSSLDG00000017205)	tmem150aa (ENSSLDG00000017242)	kcnv2b (ENSSLDG00000017286)	ENSSLDG00000017306	rbp4l (ENSSLDG00000017342)	IDUA (ENSSLDG00000017320)	tnksb (ENSSLDG00000017391)	piwil2 (ENSSLDG00000017738)	ENSSLDG00000018609 ##22	atad1a (ENSSLDG00000018621)	GALNT9 (ENSSLDG00000018643)	ENSSLDG00000018669	ENSSLDG00000018683	ENSSLDG00000018713	cavin4b (ENSSLDG00000018778)
Barramundi perch	MODERN SPECIES	95	rnf10 (ENSLCAG00010020798)	ENSLCAG00010020788	CRYBB3 (ENSLCAG00010020785)	crybb2 (ENSLCAG00010020779)	ctu1 (ENSLCAG00010020775)	ENSLCAG00010020746	rnf181 (ENSLCAG00010020726)	tmem150aa (ENSLCAG00010020722)	kcnv2b (ENSLCAG00010020719)	ENSLCAG00010020714	rbp4l (ENSLCAG00010020707)	IDUA (ENSLCAG00010020700)	tnksb (ENSLCAG00010020063)	ENSLCAG00010019843	piwil2 (ENSLCAG00010019292)	ENSLCAG00010019062 ##22	atad1a (ENSLCAG00010019056)	GALNT9 (ENSLCAG00010019002)	FBRSL1 (ENSLCAG00010018977)	chfr (ENSLCAG00010018967)	golga3 (ENSLCAG00010018801)	ankle2 (ENSLCAG00010018736)	pgam5 (ENSLCAG00010018726)	zdhhc8b (ENSLCAG00010018707)	ranbp1 (ENSLCAG00010018694)	ENSLCAG00010018691	trmt2a (ENSLCAG00010018644)	dgcr8 (ENSLCAG00010018584)	tango2 (ENSLCAG00010018562)	arvcfb (ENSLCAG00010018513)	TXNRD2 (ENSLCAG00010018356)
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000154823.a	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000002108	ENSMAMG00000002094	ENSMAMG00000002081	ENSMAMG00000002062	CRYBB2 (ENSMAMG00000024312)	ENSMAMG00000002032	ENSMAMG00000001928	ENSMAMG00000001892	ENSMAMG00000001858	kcnv2b (ENSMAMG00000001847)	ENSMAMG00000001833	ENSMAMG00000027380	ENSMAMG00000001813	tnksb (ENSMAMG00000001610)	piwil2 (ENSMAMG00000000487)	ENSMAMG00000000423 ##22	atad1a (ENSMAMG00000000353)	ENSMAMG00000000325	ENSMAMG00000000314	ENSMAMG00000020939	chfr (ENSMAMG00000020932)	golga3 (ENSMAMG00000020913)	ANKLE2 (ENSMAMG00000020909)	pgam5 (ENSMAMG00000020904)	ENSMAMG00000020901	ENSMAMG00000025825	ENSMAMG00000020892	TRMT2A (ENSMAMG00000020881)	DGCR8 (ENSMAMG00000020856)	TANGO2 (ENSMAMG00000020841)	ARVCF (ENSMAMG00000020827)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000154823.a	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Climbing perch	MODERN SPECIES	22	ENSATEG00000016792	ENSATEG00000016638	ENSATEG00000016609	ENSATEG00000016583	ENSATEG00000016560	ENSATEG00000016548	ENSATEG00000016476	ENSATEG00000016437	ENSATEG00000016401	kcnv2b (ENSATEG00000016377)	ENSATEG00000016385	ENSATEG00000016316	ENSATEG00000016263	tnksb (ENSATEG00000016200)	piwil2 (ENSATEG00000016118)	ENSATEG00000016100 ##22	atad1a (ENSATEG00000016069)	ENSATEG00000016009	ENSATEG00000028739	chfr (ENSATEG00000015922)	golga3 (ENSATEG00000015900)	ANKLE2 (ENSATEG00000015849)	pgam5 (ENSATEG00000015826)	ENSATEG00000015812	ENSATEG00000015610	ENSATEG00000015567	ENSATEG00000026138	TRMT2A (ENSATEG00000015492)	DGCR8 (ENSATEG00000015435)	ENSATEG00000015421	TANGO2 (ENSATEG00000015387)
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000024429	CRYBB3 (ENSBSLG00000024373)	crybb2 (ENSBSLG00000024371)	ctu1 (ENSBSLG00000024368)	ENSBSLG00000024367	IDUA (ENSBSLG00000024357)	piwil2 (ENSBSLG00000024281)	PXN (ENSBSLG00000024259)	rnf181 (ENSBSLG00000024252)	tmem150aa (ENSBSLG00000024242)	kcnv2b (ENSBSLG00000024233)	ENSBSLG00000024226	IDUA (ENSBSLG00000024218)	tnksb (ENSBSLG00000023573)	piwil2 (ENSBSLG00000021604)	ENSBSLG00000021503 ##22	atad1a (ENSBSLG00000021483)	GALNT9 (ENSBSLG00000021169)	ENSBSLG00000020627	ENSBSLG00000020624	FBRSL1 (ENSBSLG00000020569)	chfr (ENSBSLG00000020549)	golga3 (ENSBSLG00000020002)	ankle2 (ENSBSLG00000019915)	ENSBSLG00000019893	pgam5 (ENSBSLG00000019871)	zdhhc8b (ENSBSLG00000019816)	ranbp1 (ENSBSLG00000019767)	ENSBSLG00000019609	trmt2a (ENSBSLG00000019325)	dgcr8 (ENSBSLG00000019227)
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00940000156980.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000164100.A.c.a.d.b.a	ENSGT00940000159786	ENSGT00940000155798	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832	ENSGT00390000018606
Tetraodon	MODERN SPECIES	3	FAM163B (ENSTNIG00000016736)	ADAMTSL2 (ENSTNIG00000016737)	mymk (ENSTNIG00000016738)	slc2a8 (ENSTNIG00000016739)	HIRA (ENSTNIG00000016740)	ENSTNIG00000001807	nudt12 (ENSTNIG00000016741)	SLC12A2 (ENSTNIG00000016742)	ENSTNIG00000016743	PPIC (ENSTNIG00000016744)	SNX2 (ENSTNIG00000016745)	sncaip (ENSTNIG00000016746)	ENSTNIG00000016747	ENSTNIG00000016748	piwil2 (ENSTNIG00000016749)	ENSTNIG00000016750 ##22	atad1a (ENSTNIG00000016751)	GALNT9 (ENSTNIG00000016752)	ENSTNIG00000016753	chfr (ENSTNIG00000016754)	ENSTNIG00000016755	ENSTNIG00000016756	ankle2 (ENSTNIG00000016757)	pgam5 (ENSTNIG00000016758)	zdhhc8b (ENSTNIG00000016759)	ranbp1 (ENSTNIG00000016760)	trmt2a (ENSTNIG00000016761)	dgcr8 (ENSTNIG00000016762)	tango2 (ENSTNIG00000016763)	arvcfb (ENSTNIG00000016764)	TXNRD2 (ENSTNIG00000016765)
Fugu	MODERN SPECIES	13	HIRA (ENSTRUG00000010121)	ENSTRUG00000025472	nudt12 (ENSTRUG00000010693)	GRAMD2B (ENSTRUG00000011252)	ZNF608 (ENSTRUG00000011272)	CEP120 (ENSTRUG00000011326)	PRDM6 (ENSTRUG00000011582)	ENSTRUG00000025882	ENSTRUG00000020623	PPIC (ENSTRUG00000020078)	SNX2 (ENSTRUG00000011833)	sncaip (ENSTRUG00000012077)	ENSTRUG00000012234	zgc:158343 (ENSTRUG00000020922)	ENSTRUG00000033346	ENSTRUG00000012755 ##22	atad1a (ENSTRUG00000012810)	GALNT9 (ENSTRUG00000012871)	FBRSL1 (ENSTRUG00000012985)	chfr (ENSTRUG00000013079)	golga3 (ENSTRUG00000013241)	ankle2 (ENSTRUG00000013275)	pgam5 (ENSTRUG00000013340)	zdhhc8 (ENSTRUG00000013397)	ranbp1 (ENSTRUG00000013504)	trmt2a (ENSTRUG00000013546)	dgcr8 (ENSTRUG00000013594)	tango2 (ENSTRUG00000013653)	arvcfb (ENSTRUG00000013715)	TXNRD2 (ENSTRUG00000013903)	gnb1l (ENSTRUG00000013988)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Ballan wrasse	MODERN SPECIES	38	pop5 (ENSLBEG00000008652)	rnf10 (ENSLBEG00000008558)	ENSLBEG00000008532	CRYBB3 (ENSLBEG00000008515)	crybb2 (ENSLBEG00000008482)	ctu1 (ENSLBEG00000008459)	PXN (ENSLBEG00000008411)	rnf181 (ENSLBEG00000008371)	tmem150aa (ENSLBEG00000008345)	kcnv2b (ENSLBEG00000008331)	ENSLBEG00000008310	rbp4l (ENSLBEG00000008293)	IDUA (ENSLBEG00000008270)	tnksb (ENSLBEG00000008123)	piwil2 (ENSLBEG00000008001)	ENSLBEG00000007959 ##22	atad1a (ENSLBEG00000007909)	GALNT9 (ENSLBEG00000007861)	ENSLBEG00000007692	chfr (ENSLBEG00000007551)	ENSLBEG00000007529	ENSLBEG00000007479	kctd9a (ENSLBEG00000007415)	ankrd39 (ENSLBEG00000007391)	fgfr1a (ENSLBEG00000007287)	lgi3 (ENSLBEG00000007234)	chmp7 (ENSLBEG00000007216)	ccdc92 (ENSLBEG00000007191)	rflna (ENSLBEG00000007163)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000155742.a.b	ENSGT00940000171252	ENSGT00940000156980.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000171252	ENSGT00940000156980.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000166999.A	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000179178	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Large yellow croaker	MODERN SPECIES	2	stambpb (ENSLCRG00005005319) ##36	ENSLCRG00005005325	ppil2 (ENSLCRG00005005335)	YPEL2 (ENSLCRG00005006863)	mapk1 (ENSLCRG00005006870)	ENSLCRG00005007054	dapk1 (ENSLCRG00005009482)	ctsla (ENSLCRG00005010572)	fbp2 (ENSLCRG00005010576)	fbp1a (ENSLCRG00005010577)	ENSLCRG00005010582	cfap157 (ENSLCRG00005010610)	dmrt3a (ENSLCRG00005010611)	dmrt1 (ENSLCRG00005010615)	piwil2 (ENSLCRG00005010783)	ENSLCRG00005014668 ##22	atad1a (ENSLCRG00005014669)	GALNT9 (ENSLCRG00005014674)	FBRSL1 (ENSLCRG00005014685)	ENSLCRG00005014863	chfr (ENSLCRG00005014864)	ENSLCRG00005014894	ankle2 (ENSLCRG00005016149)	pgam5 (ENSLCRG00005016242)	ENSLCRG00005016244	zdhhc8b (ENSLCRG00005016247)	ranbp1 (ENSLCRG00005016280)	trmt2a (ENSLCRG00005016296)	dgcr8 (ENSLCRG00005016704)	tango2 (ENSLCRG00005016714)	arvcfb (ENSLCRG00005016719)
European seabass	MODERN SPECIES	13	CEP120 (ENSDLAG00005016408)	PRDM6 (ENSDLAG00005016707)	ENSDLAG00005033815	ENSDLAG00005016735	PPIC (ENSDLAG00005034316)	SNX2 (ENSDLAG00005016765)	ENSDLAG00005017130	ENSDLAG00005030276	ENSDLAG00005017193	ENSDLAG00005017213	ENSDLAG00005017376	ENSDLAG00005033988	ENSDLAG00005030975	piwil2 (ENSDLAG00005017472)	ENSDLAG00005030164	ENSDLAG00005019291 ##22	atad1a (ENSDLAG00005019295)	ENSDLAG00005019345	ENSDLAG00005019371	ENSDLAG00005019385	chfr (ENSDLAG00005020052)	golga3 (ENSDLAG00005020305)	ANKLE2 (ENSDLAG00005021392)	pgam5 (ENSDLAG00005030822)	ENSDLAG00005021488	ENSDLAG00005034691	TRMT2A (ENSDLAG00005021563)	DGCR8 (ENSDLAG00005021935)	TANGO2 (ENSDLAG00005022032)	ARVCF (ENSDLAG00005022042)	TXNRD2 (ENSDLAG00005022229)
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010007816	ENSSAUG00010007815	PRDM6 (ENSSAUG00010007813)	PPIC (ENSSAUG00010007810)	SNX2 (ENSSAUG00010006691)	ENSSAUG00010006677	sncaip (ENSSAUG00010006674)	ENSSAUG00010006665	ENSSAUG00010006660	ENSSAUG00010006397	zgc:158343 (ENSSAUG00010006393)	ENSSAUG00010006392	ENSSAUG00010006391	ENSSAUG00010006389	piwil2 (ENSSAUG00010000866)	ENSSAUG00010000764 ##22	atad1a (ENSSAUG00010000761)	GALNT9 (ENSSAUG00010000731)	FBRSL1 (ENSSAUG00010000420)	chfr (ENSSAUG00010000327)	golga3 (ENSSAUG00010000292)	ankle2 (ENSSAUG00010000248)	pgam5 (ENSSAUG00010000236)	zdhhc8b (ENSSAUG00010000212)	ranbp1 (ENSSAUG00010025680)	trmt2a (ENSSAUG00010025657)	dgcr8 (ENSSAUG00010025648)	tango2 (ENSSAUG00010025647)	arvcfb (ENSSAUG00010025641)	TXNRD2 (ENSSAUG00010024660)	gnb1l (ENSSAUG00010024609)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a	ENSGT00940000158832
Channel bull blenny	MODERN SPECIES	23	rnf10 (ENSCGOG00000006515)	ENSCGOG00000006509	CRYBB3 (ENSCGOG00000006504)	crybb2 (ENSCGOG00000006501)	ctu1 (ENSCGOG00000006500)	PXN (ENSCGOG00000006497)	rnf181 (ENSCGOG00000006490)	tmem150aa (ENSCGOG00000006479)	kcnv2b (ENSCGOG00000006477)	atp5meb (ENSCGOG00000006475)	rbp4l (ENSCGOG00000006463)	IDUA (ENSCGOG00000006303)	tnksb (ENSCGOG00000004678)	ENSCGOG00000004598	piwil2 (ENSCGOG00000002449)	ENSCGOG00000002348 ##22	atad1a (ENSCGOG00000002345)	GALNT9 (ENSCGOG00000002291)	FBRSL1 (ENSCGOG00000002237)	chfr (ENSCGOG00000001922)	golga3 (ENSCGOG00000001330)	ankle2 (ENSCGOG00000001198)	pgam5 (ENSCGOG00000001193)	zdhhc8b (ENSCGOG00000001170)	ranbp1 (ENSCGOG00000001168)	ENSCGOG00000001166	trmt2a (ENSCGOG00000001053)	dgcr8 (ENSCGOG00000000994)	tango2 (ENSCGOG00000000981)	arvcfb (ENSCGOG00000000941)	TXNRD2 (ENSCGOG00000000651)
Pike perch	MODERN SPECIES	16	rnf10 (ENSSLUG00000019446)	ENSSLUG00000019449	CRYBB3 (ENSSLUG00000019453)	crybb2 (ENSSLUG00000019457)	ctu1 (ENSSLUG00000019460)	PXN (ENSSLUG00000019468)	rnf181 (ENSSLUG00000019478)	tmem150aa (ENSSLUG00000019484)	kcnv2b (ENSSLUG00000019490)	ENSSLUG00000019493	rbp4l (ENSSLUG00000019497)	IDUA (ENSSLUG00000019501)	tnksb (ENSSLUG00000019568)	ENSSLUG00000021040	piwil2 (ENSSLUG00000021186)	ENSSLUG00000023816 ##22	atad1a (ENSSLUG00000023848)	ENSSLUG00000023854	olfml2a (ENSSLUG00000023860)	nr6a1a (ENSSLUG00000023866)	nr5a1a (ENSSLUG00000023874)	ADGRD2 (ENSSLUG00000023884)	lhx2b (ENSSLUG00000023891)	ENSSLUG00000023894	ENSSLUG00000023910	ENSSLUG00000023950	ENSSLUG00000005161	ENSSLUG00000005171	ccn1l2 (ENSSLUG00000005178)	FKBP15 (ENSSLUG00000005202)	fgf17 (ENSSLUG00000005289)
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00390000014595.b.b	ENSGT00390000012331	ENSGT00390000001731	ENSGT00940000154184.A	ENSGT00940000158425.a	ENSGT00940000160048	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00870000136894	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Stickleback	MODERN SPECIES	12	hnf1a (ENSGACG00000012691)	unc119.1 (ENSGACG00000012704)	ENSGACG00000012710	rnf10 (ENSGACG00000012715)	ENSGACG00000012734	CRYBB3 (ENSGACG00000012740)	crybb2 (ENSGACG00000012752)	ctu1 (ENSGACG00000012764)	PXN (ENSGACG00000012778)	rnf181 (ENSGACG00000012789)	tmem150aa (ENSGACG00000012801)	kcnv2b (ENSGACG00000012807)	IDUA (ENSGACG00000012817)	tnksb (ENSGACG00000012837)	piwil2 (ENSGACG00000012851)	ENSGACG00000012857 ##22	atad1a (ENSGACG00000012861)	GALNT9 (ENSGACG00000012865)	FBRSL1 (ENSGACG00000012894)	chfr (ENSGACG00000012903)	ENSGACG00000012916	ENSGACG00000012918	golga3 (ENSGACG00000012921)	ankle2 (ENSGACG00000012934)	pgam5 (ENSGACG00000012945)	zdhhc8b (ENSGACG00000012949)	ranbp1 (ENSGACG00000012952)	trmt2a (ENSGACG00000012965)	dgcr8 (ENSGACG00000012975)	tango2 (ENSGACG00000012977)	arvcfb (ENSGACG00000013003)
Lumpfish	MODERN SPECIES	24	ap3m2 (ENSCLMG00005020834)	kat6a (ENSCLMG00005020842)	ENSCLMG00005020846	sema4c (ENSCLMG00005020848)	tbx1 (ENSCLMG00005020851)	gnb1l (ENSCLMG00005020854)	TXNRD2 (ENSCLMG00005020866)	arvcfb (ENSCLMG00005004255)	tango2 (ENSCLMG00005004831)	dgcr8 (ENSCLMG00005004858)	trmt2a (ENSCLMG00005005979)	ENSCLMG00005005990	ranbp1 (ENSCLMG00005005992)	zdhhc8b (ENSCLMG00005005994)	piwil2 (ENSCLMG00005005997)	ENSCLMG00005005999 ##22	atad1a (ENSCLMG00005006001)	GALNT9 (ENSCLMG00005006002)	FBRSL1 (ENSCLMG00005006003)	chfr (ENSCLMG00005006044)	golga3 (ENSCLMG00005006367)	ankle2 (ENSCLMG00005009789)	pgam5 (ENSCLMG00005009810)	tnksb (ENSCLMG00005009829)	IDUA (ENSCLMG00005010416)	ENSCLMG00005010418	ENSCLMG00005010419	kcnv2b (ENSCLMG00005010421)	tmem150aa (ENSCLMG00005010423)	rnf181 (ENSCLMG00005010424)	PXN (ENSCLMG00005010425)
Cod	MODERN SPECIES	19	ficd (ENSGMOG00000017853)	cmklr1 (ENSGMOG00000034344)	cmklr1 (ENSGMOG00000019857)	wscd2 (ENSGMOG00000017841)	si:ch211-225b11.1 (ENSGMOG00000000487)	limk2 (ENSGMOG00000026617)	ENSGMOG00000025457	ENSGMOG00000007444	ENSGMOG00000007450	ENSGMOG00000007494	kcnv2b (ENSGMOG00000029327)	atp5meb (ENSGMOG00000030132)	ENSGMOG00000016535	ENSGMOG00000007555	tnksb (ENSGMOG00000007567)	ENSGMOG00000035548 ##22	atad1a (ENSGMOG00000007603)	ENSGMOG00000007611	ENSGMOG00000034511	chfr (ENSGMOG00000007630)	golga3 (ENSGMOG00000007665)	ANKLE2 (ENSGMOG00000007676)	pgam5 (ENSGMOG00000007688)	ENSGMOG00000007695	ENSGMOG00000007701	TRMT2A (ENSGMOG00000007707)	ENSGMOG00000023669	DGCR8 (ENSGMOG00000007715)	TANGO2 (ENSGMOG00000007735)	ARVCF (ENSGMOG00000034656)	TXNRD2 (ENSGMOG00000018581)
Protacanthopterygii	ANCESTRAL SPECIES	93											ENSGT00940000157438.c	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a	ENSGT00940000154389.b	ENSGT00900000141073	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	37												ENSGT00940000161915.a.b	ENSGT00510000047107.B.d.a	ENSGT00940000156161.B.k	ENSGT00950000183200.B.i	ENSGT01010000222287.B.a.a.a.b.a ##22	ENSGT00940000156599.h.a	ENSGT00940000160709.ab.b.a	ENSGT00400000022306.g	ENSGT00950000183078.b.b.e	ENSGT00390000016767.q.a	ENSGT00390000004796.c.a	ENSGT00940000158044.a.c	ENSGT00940000154389.b.p	ENSGT00530000063723.a.d	ENSGT00390000015977.f	ENSGT00390000012733.m	ENSGT00940000157027.n.a.c	ENSGT00940000158832.k.b	ENSGT00390000018606	ENSGT00940000154816.a.b.e
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT00950000183049.E.d	ENSGT00940000181029	ENSGT00950000183167.a.b.b.a.g.a	ENSGT00530000064873.b.j	ENSGT00730000113582.b	ENSGT00940000158546.k	ENSGT00950000182953.C.c.e	ENSGT00940000158782.d.a.e	ENSGT00390000004965.a.b	ENSGT00530000063255.C.h	ENSGT00940000166311	ENSGT00940000161915.a.b	ENSGT00510000047107.B.d.a	ENSGT00940000156161.B.k	ENSGT00950000183200.B.i	ENSGT01010000222287.B.a.a.a.b.a ##22	ENSGT00940000156599.h.a	ENSGT00940000160709.ab.b.a	ENSGT00400000022306.g	ENSGT00950000183078.b.b.e	ENSGT00390000016767.q.a	ENSGT00390000004796.c.a	ENSGT00940000158044.a.c	ENSGT00940000154389.b.p	ENSGT00530000063723.a.d	ENSGT00390000015977.f	ENSGT00390000012733.m	ENSGT00940000157027.n.a.c	ENSGT00940000158832.k.b	ENSGT00390000018606	ENSGT00940000154816.a.b.e
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00950000183049.E.d	ENSGT00940000181029	ENSGT00950000183167.a.b.b.a.g.a	ENSGT00530000064873.b.j	ENSGT00730000113582.b	ENSGT00940000158546.k	ENSGT00950000182953.C.c.e	ENSGT00940000158782.d.a.e	ENSGT00390000004965.a.b	ENSGT00530000063255.C.h	ENSGT00940000166311	ENSGT00940000161915.a.b	ENSGT00510000047107.B.d.a	ENSGT00940000156161.B.k	ENSGT00950000183200.B.i	ENSGT01010000222287.B.a.a.a.b.a ##22	ENSGT00940000156599.h.a	ENSGT00940000160709.ab.b.a	ENSGT00400000022306.g	ENSGT00950000183078.b.b.e	ENSGT00390000016767.q.a	ENSGT00390000004796.c.a	ENSGT00940000158044.a.c	ENSGT00940000154389.b.p	ENSGT00530000063723.a.d	ENSGT00390000015977.f	ENSGT00390000012733.m	ENSGT00940000157027.n.a.c	ENSGT00940000158832.k.b	ENSGT00390000018606.e	ENSGT00940000154816.a.b.e
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000047109	ENSOMYG00000047114	ENSOMYG00000047116	ENSOMYG00000047120	ENSOMYG00000047154	ENSOMYG00000047208	ENSOMYG00000047210	zgc:152830 (ENSOMYG00000047220)	fahd2a (ENSOMYG00000047237)	adra2b (ENSOMYG00000047243)	ENSOMYG00000064241	ENSOMYG00000070717	ENSOMYG00000047245	ENSOMYG00000047307	piwil2 (ENSOMYG00000047498)	ENSOMYG00000072520 ##22	ENSOMYG00000047578	ENSOMYG00000056871	ENSOMYG00000047581	chfr (ENSOMYG00000047582)	golga3 (ENSOMYG00000047633)	ANKLE2 (ENSOMYG00000047668)	pgam5 (ENSOMYG00000047671)	ENSOMYG00000052971	ENSOMYG00000047672	ENSOMYG00000047674	TRMT2A (ENSOMYG00000047676)	DGCR8 (ENSOMYG00000047682)	TANGO2 (ENSOMYG00000047695)	ARVCF (ENSOMYG00000047699)	TXNRD2 (ENSOMYG00000047721)
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00950000183049.E.d	ENSGT00940000181029	ENSGT00950000183167.a.b.b.a.g.a	ENSGT00530000064873.b.j	ENSGT00730000113582.b	ENSGT00940000158546.k	ENSGT00950000182953.C.c.e	ENSGT00940000158782.d.a.e	ENSGT00390000004965.a.b	ENSGT00530000063255.C.h	ENSGT00940000166311	ENSGT00940000161915.a.b	ENSGT00510000047107.B.d.a	ENSGT00940000156161.B.k	ENSGT00950000183200.B.i	ENSGT01010000222287.B.a.a.a.b.a ##22	ENSGT00940000156599.h.a	ENSGT00940000160709.ab.b.a	ENSGT00400000022306.g	ENSGT00950000183078.b.b.e	ENSGT00390000016767.q.a	ENSGT00390000004796.c.a	ENSGT00940000158044.a.c	ENSGT00940000154389.b.p	ENSGT00530000063723.a.d	ENSGT00390000015977.f	ENSGT00390000012733.m	ENSGT00940000157027.n.a.c	ENSGT00940000158832.k.b	ENSGT00390000018606.e	ENSGT00940000154816.a.b.e
Coho salmon	MODERN SPECIES	22	ENSOKIG00005028365	ENSOKIG00005028998	LETM2 (ENSOKIG00005029028)	prnprs3 (ENSOKIG00005029061)	ENSOKIG00005029077	RASSF2 (ENSOKIG00005029088)	SLC23A2 (ENSOKIG00005029129)	ENSOKIG00005029364	PCNA (ENSOKIG00005029428)	zgc:152830 (ENSOKIG00005029470)	fahd2a (ENSOKIG00005029594)	adra2b (ENSOKIG00005029621)	ENSOKIG00005029635	TNKS (ENSOKIG00005029836)	piwil2 (ENSOKIG00005031666)	ENSOKIG00005034465 ##22	GALNT9 (ENSOKIG00005034468)	FBRSL1 (ENSOKIG00005034536)	chfr (ENSOKIG00005034849)	golga3 (ENSOKIG00005035210)	ANKLE2 (ENSOKIG00005038179)	pgam5 (ENSOKIG00005038263)	zdhhc8b (ENSOKIG00005000053)	ENSOKIG00005000084	TRMT2A (ENSOKIG00005000130)	DGCR8 (ENSOKIG00005000220)	tango2 (ENSOKIG00005000296)	arvcfb (ENSOKIG00005000352)	TXNRD2 (ENSOKIG00005000525)	gnb1l (ENSOKIG00005000714)	tbx1 (ENSOKIG00005000720)
Chinook salmon	MODERN SPECIES	28	ssbp2a (ENSOTSG00005020333)	ENSOTSG00005020334	LETM2 (ENSOTSG00005020337)	prnprs3 (ENSOTSG00005020340)	ENSOTSG00005020341	rassf2a (ENSOTSG00005020342)	SLC23A2 (ENSOTSG00005020345)	KCNIP3 (ENSOTSG00005020372)	PCNA (ENSOTSG00005020375)	zgc:152830 (ENSOTSG00005020379)	FAHD2B (ENSOTSG00005020387)	adra2b (ENSOTSG00005020388)	rbp4l (ENSOTSG00005020389)	tnksb (ENSOTSG00005020417)	piwil2 (ENSOTSG00005023455)	ENSOTSG00005028910 ##22	GALNT9 (ENSOTSG00005028911)	FBRSL1 (ENSOTSG00005028915)	chfr (ENSOTSG00005028920)	golga3 (ENSOTSG00005029042)	ankle2 (ENSOTSG00005034668)	pgam5 (ENSOTSG00005034669)	zdhhc8b (ENSOTSG00005034670)	ranbp1 (ENSOTSG00005034671)	trmt2a (ENSOTSG00005034679)	dgcr8 (ENSOTSG00005034681)	tango2 (ENSOTSG00005034901)	arvcfb (ENSOTSG00005034910)	TXNRD2 (ENSOTSG00005034945)	gnb1l (ENSOTSG00005035217)	tbx1 (ENSOTSG00005035220)
Salmo	ANCESTRAL SPECIES		ENSGT00950000183049.E.d	ENSGT00940000181029	ENSGT00950000183167.a.b.b.a.g.a	ENSGT00530000064873.b.j	ENSGT00730000113582.b	ENSGT00940000158546.k	ENSGT00950000182953.C.c.e	ENSGT00940000158782.d.a.e	ENSGT00390000004965.a.b	ENSGT00530000063255.C.h	ENSGT00940000166311	ENSGT00940000161915.a.b	ENSGT00510000047107.B.d.a	ENSGT00940000156161.B.k	ENSGT00950000183200.B.i	ENSGT01010000222287.B.a.a.a.b.a ##22	ENSGT00940000156599.h.a	ENSGT00940000160709.ab.b.a	ENSGT00400000022306.g	ENSGT00950000183078.b.b.e	ENSGT00390000016767.q.a	ENSGT00390000004796.c.a	ENSGT00940000158044.a.c	ENSGT00940000154389.b.p	ENSGT00390000015977.f	ENSGT00390000012733.m	ENSGT00940000157027.n.a.c	ENSGT00940000158832.k.b	ENSGT00390000018606	ENSGT00940000154816.a.b.e	ENSGT00940000159885.m
River trout	MODERN SPECIES	19	ENSSTUG00000035709	LETM2 (ENSSTUG00000035700)	prnprs3 (ENSSTUG00000035692)	ENSSTUG00000035689	rassf2a (ENSSTUG00000034925)	SLC23A2 (ENSSTUG00000034813)	KCNIP3 (ENSSTUG00000034725)	PCNA (ENSSTUG00000034708)	zgc:152830 (ENSSTUG00000034574)	fahd2a (ENSSTUG00000034555)	adra2b (ENSSTUG00000034548)	ENSSTUG00000034535	rbp4l (ENSSTUG00000034519)	tnksb (ENSSTUG00000033618)	piwil2 (ENSSTUG00000033078)	ENSSTUG00000033059 ##22	ENSSTUG00000033056	ENSSTUG00000033029	FBRSL1 (ENSSTUG00000032598)	chfr (ENSSTUG00000032136)	golga3 (ENSSTUG00000029405)	ankle2 (ENSSTUG00000029278)	pgam5 (ENSSTUG00000029253)	zdhhc8b (ENSSTUG00000029223)	ranbp1 (ENSSTUG00000029154)	dgcr8 (ENSSTUG00000028218)	tango2 (ENSSTUG00000028113)	arvcfb (ENSSTUG00000027951)	TXNRD2 (ENSSTUG00000026809)	gnb1l (ENSSTUG00000026763)	tbx1 (ENSSTUG00000026740)
Atlantic salmon	MODERN SPECIES	16	ENSSSAG00000079627	slc25a1 (ENSSSAG00000041957)	ENSSSAG00000015367	ENSSSAG00000014312	ENSSSAG00000093826	ENSSSAG00000013522	rasf2 (ENSSSAG00000060434)	SLC23A2 (ENSSSAG00000009135)	ENSSSAG00000008808	ENSSSAG00000008784	ENSSSAG00000061181	ENSSSAG00000094659	ENSSSAG00000062846	ENSSSAG00000081399	piwil2 (ENSSSAG00000111564)	ENSSSAG00000081376 ##22	ENSSSAG00000081957	ENSSSAG00000081333	chfr (ENSSSAG00000081316)	ENSSSAG00000082369	golga3 (ENSSSAG00000081231)	ANKLE2 (ENSSSAG00000095591)	pgam5 (ENSSSAG00000081207)	ENSSSAG00000081185	ranbp1 (ENSSSAG00000081173)	ENSSSAG00000110966	DGCR8 (ENSSSAG00000081127)	tango2 (ENSSSAG00000081113)	ENSSSAG00000086975	ENSSSAG00000114183	ARVCF (ENSSSAG00000081080)
Huchen	MODERN SPECIES	25												adra2b (ENSHHUG00000023421)	rbp4l (ENSHHUG00000023442)	tnksb (ENSHHUG00000023446)	piwil2 (ENSHHUG00000023470)	ENSHHUG00000023968 ##22	GALNT9 (ENSHHUG00000023969)	ENSHHUG00000023980	ENSHHUG00000023981	ENSHHUG00000023983	ENSHHUG00000023988	chfr (ENSHHUG00000023992)	golga3 (ENSHHUG00000024031)	ankle2 (ENSHHUG00000024097)	pgam5 (ENSHHUG00000024130)	zdhhc8b (ENSHHUG00000024136)	ranbp1 (ENSHHUG00000024149)	trmt2a (ENSHHUG00000024177)	dgcr8 (ENSHHUG00000024181)	tango2 (ENSHHUG00000024197)	arvcfb (ENSHHUG00000024259)
Salmoninae	ANCESTRAL SPECIES	77	ENSGT00940000158546.l	ENSGT00950000182953.C.c.f	ENSGT00940000158782.d.a.f	ENSGT00390000004965.a.a	ENSGT00530000063255.C.g	ENSGT00520000055570.A.b	ENSGT00940000161915.a.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000157438.c	ENSGT00390000005102.ed	ENSGT00510000047107.B.d.b	ENSGT00390000015494	ENSGT00940000156161.B.l	ENSGT00950000183200.B.j	ENSGT01010000222287.B.a.a.a.b.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.h.b	ENSGT00940000160709.`b	ENSGT00940000160709.ab.b.b	ENSGT00400000022306.h	ENSGT00950000183078.b.b.f	ENSGT00390000016767.q.b	ENSGT00390000004796.c.b	ENSGT00940000158044.a.d	ENSGT00940000154389.b.o	ENSGT00530000063723.a.c	ENSGT00900000143393	ENSGT00390000015977.e	ENSGT00390000012733.n
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00940000158546.l	ENSGT00950000182953.C.c.f	ENSGT00940000158782.d.a.f	ENSGT00390000004965.a.a	ENSGT00530000063255.C.g	ENSGT00520000055570.A.b	ENSGT00940000161915.a.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000157438.c	ENSGT00390000005102.ed	ENSGT00510000047107.B.d.b	ENSGT00390000015494	ENSGT00940000156161.B.l	ENSGT00950000183200.B.j	ENSGT01010000222287.B.a.a.a.b.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.h.b	ENSGT00940000160709.ab.b.b	ENSGT00400000022306.h	ENSGT00950000183078.b.b.f	ENSGT00390000016767.q.b	ENSGT00390000004796.c.b	ENSGT00940000158044.a.d	ENSGT00940000154389.b.o	ENSGT00530000063723.a.c	ENSGT00900000143393	ENSGT00390000015977.e	ENSGT00390000012733.n	ENSGT00940000157027.n.a.d	ENSGT00940000158832.k.a
Salmo	ANCESTRAL SPECIES	19	ENSGT00940000158546.l	ENSGT00950000182953.C.c.f	ENSGT00940000158782.d.a.f	ENSGT00390000004965.a.a	ENSGT00530000063255.C.g	ENSGT00520000055570.A.b	ENSGT00940000161915.a.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000157438.c	ENSGT00390000005102.ed	ENSGT00510000047107.B.d.b	ENSGT00390000015494	ENSGT00940000156161.B.l	ENSGT00950000183200.B.j	ENSGT01010000222287.B.a.a.a.b.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.h.b	ENSGT00940000160709.ab.b.b	ENSGT00400000022306.h	ENSGT00950000183078.b.b.f	ENSGT00390000016767.q.b	ENSGT00390000004796.c.b	ENSGT00940000158044.a.d	ENSGT00940000154389.b.o	ENSGT00530000063723.a.c	ENSGT00900000143393	ENSGT00390000015977.e	ENSGT00390000012733.n	ENSGT00940000157027.n.a.d	ENSGT00940000158832.k.a
River trout	MODERN SPECIES	39	prnprs3 (ENSSTUG00000048896)	rassf2a (ENSSTUG00000048899)	ENSSTUG00000048922	ENSSTUG00000049006	PCNA (ENSSTUG00000049031)	zgc:152830 (ENSSTUG00000049037)	gpat2 (ENSSTUG00000049059)	ENSSTUG00000049182	adra2b (ENSSTUG00000049186)	dusp2 (ENSSTUG00000049191)	kcnv2b (ENSSTUG00000049197)	ENSSTUG00000049199	rbp4l (ENSSTUG00000049204)	IDUA (ENSSTUG00000049215)	tnksb (ENSSTUG00000049314)	ENSSTUG00000049788 ##22	atad1a (ENSSTUG00000049790)	GALNT9 (ENSSTUG00000049797)	FBRSL1 (ENSSTUG00000049803)	chfr (ENSSTUG00000049810)	golga3 (ENSSTUG00000049880)	ankle2 (ENSSTUG00000050148)	pgam5 (ENSSTUG00000050161)	zdhhc8b (ENSSTUG00000050165)	ranbp1 (ENSSTUG00000050168)	trmt2a (ENSSTUG00000050197)	ENSSTUG00000050270	dgcr8 (ENSSTUG00000050281)	tango2 (ENSSTUG00000050306)	arvcfb (ENSSTUG00000050331)	ENSSTUG00000050359
Atlantic salmon	MODERN SPECIES	12	ENSSSAG00000120772	ENSSSAG00000060516	ENSSSAG00000061084	ENSSSAG00000061142	zgc:152830 (ENSSSAG00000008644)	gpat2 (ENSSSAG00000061279)	adra2b (ENSSSAG00000061620)	dusp2 (ENSSSAG00000082156)	ENSSSAG00000121795	kcnv2b (ENSSSAG00000062839)	ATP5I (ENSSSAG00000062841)	ENSSSAG00000081425	ENSSSAG00000061740	tnksb (ENSSSAG00000062901)	ENSSSAG00000063625	ENSSSAG00000094410 ##22	atad1a (ENSSSAG00000063638)	ENSSSAG00000103345	ENSSSAG00000063692	chfr (ENSSSAG00000109055)	golga3 (ENSSSAG00000064385)	ANKLE2 (ENSSSAG00000108432)	pgam5 (ENSSSAG00000068639)	ENSSSAG00000068646	RANG (ENSSSAG00000068670)	TRMT2A (ENSSSAG00000068818)	ENSSSAG00000069888	DGCR8 (ENSSSAG00000069919)	TANGO2 (ENSSSAG00000070735)	ARVCF (ENSSSAG00000070791)	ENSSSAG00000062174
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00940000158546.l	ENSGT00950000182953.C.c.f	ENSGT00940000158782.d.a.f	ENSGT00390000004965.a.a	ENSGT00530000063255.C.g	ENSGT00520000055570.A.b	ENSGT00940000161915.a.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000157438.c	ENSGT00390000005102.ed	ENSGT00510000047107.B.d.b	ENSGT00390000015494	ENSGT00940000156161.B.l	ENSGT00950000183200.B.j	ENSGT01010000222287.B.a.a.a.b.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.h.b	ENSGT00940000160709.ab.b.b	ENSGT00400000022306.h	ENSGT00950000183078.b.b.f	ENSGT00390000016767.q.b	ENSGT00390000004796.c.b	ENSGT00940000158044.a.d	ENSGT00940000154389.b.o	ENSGT00900000143393	ENSGT00530000063723.a.c	ENSGT00390000015977.e	ENSGT00390000012733.n	ENSGT00940000157027.n.a.d	ENSGT00940000158832.k.a
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00940000158546.l	ENSGT00950000182953.C.c.f	ENSGT00940000158782.d.a.f	ENSGT00390000004965.a.a	ENSGT00530000063255.C.g	ENSGT00520000055570.A.b	ENSGT00940000161915.a.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000157438.c	ENSGT00390000005102.ed	ENSGT00510000047107.B.d.b	ENSGT00390000015494	ENSGT00940000156161.B.l	ENSGT00950000183200.B.j	ENSGT01010000222287.B.a.a.a.b.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599.h.b	ENSGT00940000160709.ab.b.b	ENSGT00400000022306.h	ENSGT00950000183078.b.b.f	ENSGT00390000016767.q.b	ENSGT00390000004796.c.b	ENSGT00940000158044.a.d	ENSGT00940000154389.b.o	ENSGT00900000143393	ENSGT00530000063723.a.c	ENSGT00390000015977.e	ENSGT00390000012733.n	ENSGT00940000157027.n.a.d	ENSGT00940000158832.k.a
Coho salmon	MODERN SPECIES	28	ENSOKIG00005019013	rassf2a (ENSOKIG00005018913)	zgc:63587 (ENSOKIG00005018832)	SLC23A2 (ENSOKIG00005018664)	ENSOKIG00005018640	PCNA (ENSOKIG00005018627)	zgc:152830 (ENSOKIG00005018553)	gpat2 (ENSOKIG00005018465)	adra2b (ENSOKIG00005018453)	dusp2 (ENSOKIG00005018446)	kcnv2b (ENSOKIG00005018437)	ENSOKIG00005018432	ENSOKIG00005018411	IDUA (ENSOKIG00005018331)	tnksb (ENSOKIG00005015883)	ENSOKIG00005015728 ##22	atad1a (ENSOKIG00005015578)	GALNT9 (ENSOKIG00005015559)	FBRSL1 (ENSOKIG00005015412)	chfr (ENSOKIG00005015019)	golga3 (ENSOKIG00005011755)	ankle2 (ENSOKIG00005011340)	pgam5 (ENSOKIG00005011328)	ZDHHC8 (ENSOKIG00005011304)	ranbp1 (ENSOKIG00005011262)	ENSOKIG00005011256	trmt2a (ENSOKIG00005010127)	dgcr8 (ENSOKIG00005009307)	TANGO2 (ENSOKIG00005009224)	ENSOKIG00005009213	ARVCF (ENSOKIG00005009048)
Chinook salmon	MODERN SPECIES	3	ENSOTSG00005006554	OTUD7A (ENSOTSG00005006553)	PCNA (ENSOTSG00005006551)	zgc:152830 (ENSOTSG00005006549)	gpat2 (ENSOTSG00005006545)	adra2b (ENSOTSG00005006544)	dusp2 (ENSOTSG00005006543)	ENSOTSG00005006542	kcnv2b (ENSOTSG00005006541)	ENSOTSG00005006540	rbp4l (ENSOTSG00005006539)	IDUA (ENSOTSG00005006534)	tnksb (ENSOTSG00005000996)	ENSOTSG00005046732	ENSOTSG00005046731	ENSOTSG00005046729 ##22	atad1a (ENSOTSG00005046728)	GALNT9 (ENSOTSG00005046727)	FBRSL1 (ENSOTSG00005046725)	chfr (ENSOTSG00005046721)	golga3 (ENSOTSG00005046198)	ankle2 (ENSOTSG00005046163)	pgam5 (ENSOTSG00005046158)	zdhhc8b (ENSOTSG00005046153)	trmt2a (ENSOTSG00005046128)	dgcr8 (ENSOTSG00005045857)	tango2 (ENSOTSG00005045856)	arvcfb (ENSOTSG00005045826)	TXNRD2 (ENSOTSG00005045824)	gnb1l (ENSOTSG00005045822)	tbx1 (ENSOTSG00005045821)
Rainbow trout	MODERN SPECIES	2	ENSOMYG00000014468	ENSOMYG00000014476	ENSOMYG00000014534	ENSOMYG00000014787	ENSOMYG00000049246	ENSOMYG00000014984	gpat2 (ENSOMYG00000015056)	ENSOMYG00000060973	ENSOMYG00000015110	dusp2 (ENSOMYG00000015118)	kcnv2b (ENSOMYG00000015121)	ENSOMYG00000015132	ENSOMYG00000015174	tnksb (ENSOMYG00000015683)	ENSOMYG00000020211	ENSOMYG00000047575 ##22	atad1a (ENSOMYG00000020254)	ENSOMYG00000020312	ENSOMYG00000055266	ENSOMYG00000020396	chfr (ENSOMYG00000020516)	golga3 (ENSOMYG00000020924)	ANKLE2 (ENSOMYG00000026394)	pgam5 (ENSOMYG00000026424)	ENSOMYG00000026468	ENSOMYG00000030202	ENSOMYG00000026571	TRMT2A (ENSOMYG00000026956)	ENSOMYG00000028285	DGCR8 (ENSOMYG00000028643)	TANGO2 (ENSOMYG00000029402)
Huchen	MODERN SPECIES	304	ENSHHUG00000020772	SLC23A2 (ENSHHUG00000020711)	ENSHHUG00000020677	PCNA (ENSHHUG00000020638)	zgc:152830 (ENSHHUG00000020614)	gpat2 (ENSHHUG00000020599)	ENSHHUG00000020595	adra2b (ENSHHUG00000020588)	dusp2 (ENSHHUG00000020585)	kcnv2b (ENSHHUG00000020583)	ENSHHUG00000020578	rbp4l (ENSHHUG00000020570)	IDUA (ENSHHUG00000020540)	tnksb (ENSHHUG00000020285)	piwil2 (ENSHHUG00000020095)	ENSHHUG00000020090 ##22	atad1a (ENSHHUG00000020080)	ENSHHUG00000020056	ENSHHUG00000020053
Northern pike	MODERN SPECIES	12	rassf2a (ENSELUG00000008747)	SLC23A2 (ENSELUG00000008681)	KCNIP3 (ENSELUG00000008625)	pcna (ENSELUG00000008596)	zgc:152830 (ENSELUG00000008440)	ENSELUG00000027331	fahd2a (ENSELUG00000008400)	ENSELUG00000031342	adra2b (ENSELUG00000008331)	kcnv2b (ENSELUG00000008316)	ENSELUG00000029503	rbp4l (ENSELUG00000026369)	IDUA (ENSELUG00000008163)	tnksb (ENSELUG00000008089)	piwil2 (ENSELUG00000007978)	ENSELUG00000007965 ##22	atad1a (ENSELUG00000007942)	GALNT9 (ENSELUG00000007900)	ENSELUG00000007671	ENSELUG00000024671	FBRSL1 (ENSELUG00000007797)	chfr (ENSELUG00000007647)	golga3 (ENSELUG00000007469)	ankle2 (ENSELUG00000007115)	pgam5 (ENSELUG00000007105)	zdhhc8b (ENSELUG00000007087)	RANBP1 (ENSELUG00000007065)	ENSELUG00000006974	trmt2a (ENSELUG00000006996)	dgcr8 (ENSELUG00000006969)	tango2 (ENSELUG00000006944)
Otomorpha	ANCESTRAL SPECIES	97														ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00900000141073	ENSGT00940000154389.b	ENSGT00530000063723.a	ENSGT00900000143393	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Otophysi	ANCESTRAL SPECIES	168	ENSGT00940000158832	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000018806	ENSGT00940000159671
Characiphysae	ANCESTRAL SPECIES	14	ENSGT00940000158832	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00940000182449	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000018806	ENSGT00940000159671	ENSGT00390000002024	ENSGT00940000156044	ENSGT00940000154702.b	ENSGT00550000074919	ENSGT00940000164243	ENSGT00940000165954	ENSGT00800000124190	ENSGT00390000008206
Channel catfish	MODERN SPECIES	14	TXNRD2 (ENSIPUG00000017765)	TAOK3 (ENSIPUG00000017918)	pebp1 (ENSIPUG00000018071)	suds3 (ENSIPUG00000018099)	ENSIPUG00000018138	hspb8 (ENSIPUG00000018154)	HSPB1 (ENSIPUG00000018214)	ENSIPUG00000018179	xbp1 (ENSIPUG00000018225)	znrf3 (ENSIPUG00000018241)	coq5 (ENSIPUG00000018269)	kremen1 (ENSIPUG00000018289)	susd2 (ENSIPUG00000018306)	slc39a14 (ENSIPUG00000018390)	piwil2 (ENSIPUG00000018436)	ENSIPUG00000019164 ##22	fbp1b (ENSIPUG00000019175)	ENSIPUG00000019229	ccdc117 (ENSIPUG00000019243)	tcn2 (ENSIPUG00000019255)	rabl6 (ENSIPUG00000019266)	si:ch211-102c2.4 (ENSIPUG00000019316)	Imp4 (ENSIPUG00000019326)	hscb (ENSIPUG00000019393)	rtn4r (ENSIPUG00000019461)	PRODH (ENSIPUG00000019471)	scarf2 (ENSIPUG00000019499)	zgc:112294 (ENSIPUG00000019507)	CABP7 (ENSIPUG00000019518)	nf2 (ENSIPUG00000019531)	fbxo21 (ENSIPUG00000019617)
Characiphysae_b	ANCESTRAL SPECIES	12	ENSGT00390000018606	ENSGT00940000158832	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000018806	ENSGT00940000159671	ENSGT00390000002024	ENSGT00940000156044	ENSGT00940000154702.b	ENSGT00550000074919	ENSGT00940000164243	ENSGT00940000165954	ENSGT00800000124190	ENSGT00390000008206
Characoidei	ANCESTRAL SPECIES	10									ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.d	ENSGT00940000157986.c	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306.c	ENSGT00940000158044.a	ENSGT00390000018806	ENSGT00940000159671	ENSGT00390000002024	ENSGT00940000156044	ENSGT00940000154702.b	ENSGT00550000074919	ENSGT00940000164243	ENSGT00940000165954	ENSGT00800000124190	ENSGT00390000008206
Mexicana tetra	MODERN SPECIES	38	ewsr1b (ENSAMXG00000003041)	ENSAMXG00000039230	ENSAMXG00000039152	ENSAMXG00000040825	ap1b1 (ENSAMXG00000002958)	rasl10a (ENSAMXG00000033427)	ENSAMXG00000034075	ZNRF3 (ENSAMXG00000043467)	coq5 (ENSAMXG00000001845)	kremen1 (ENSAMXG00000001837)	SUSD2 (ENSAMXG00000001807)	ENSAMXG00000036803	ENSAMXG00000030523	slc39a14 (ENSAMXG00000001784)	piwil2 (ENSAMXG00000001746)	ENSAMXG00000001715 ##22	atad1a (ENSAMXG00000038190)	GALNT9 (ENSAMXG00000030395)	ENSAMXG00000034357	FBRSL1 (ENSAMXG00000016407)	chfr (ENSAMXG00000040647)	zdhhc8b (ENSAMXG00000016353)	ascc2 (ENSAMXG00000016326)	ENSAMXG00000041370	bri3bp (ENSAMXG00000039832)	aacs (ENSAMXG00000037474)
Electric eel	MODERN SPECIES	652											ENSEEEG00000021835	kremen1 (ENSEEEG00000021837)	SUSD2 (ENSEEEG00000021841)	slc39a14 (ENSEEEG00000021846)	ENSEEEG00000021849	ENSEEEG00000021854 ##22	atad1a (ENSEEEG00000021855)	ENSEEEG00000021857
Cyprinoidei	ANCESTRAL SPECIES	16	ENSGT00940000158832	ENSGT00940000157251	ENSGT00940000155735.q.c	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000018806	ENSGT00940000159671	ENSGT00550000074919	ENSGT00940000154702.b	ENSGT00940000156044	ENSGT00390000002024	ENSGT00940000159487	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	20	pebp1 (ENSDARG00000042069)	TAOK3 (ENSDARG00000060751)	suds3 (ENSDARG00000073737)	ENSDARG00000114460	ENSDARG00000086327	ENSDARG00000068742	hspb8 (ENSDARG00000058365)	ENSDARG00000105422	xbp1 (ENSDARG00000035622)	znrf3 (ENSDARG00000062573)	coq5 (ENSDARG00000035618)	kremen1 (ENSDARG00000062579)	SUSD2 (ENSDARG00000101452)	slc39a14 (ENSDARG00000102387)	piwil2 (ENSDARG00000062601)	ENSDARG00000095272 ##22	atad1a (ENSDARG00000023267)	GALNT9 (ENSDARG00000006832)	ENSDARG00000092687	ENSDARG00000058232	chfr (ENSDARG00000075347)	ENSDARG00000093201	zdhhc8b (ENSDARG00000018508)	ascc2 (ENSDARG00000013058)	ENSDARG00000059424	HIRA (ENSDARG00000013434)	TMEM132C (ENSDARG00000062538)	aacs (ENSDARG00000012468)	bri3bp (ENSDARG00000010108)	poli (ENSDARG00000029250)	pgam5 (ENSDARG00000035608)
Zebrafish	MODERN SPECIES	1	prnpb (ENSDARG00000044048)	ENSDARG00000088831	LETM2 (ENSDARG00000077515)	NSD3 (ENSDARG00000062765)	plpp5 (ENSDARG00000057672)	DDHD2 (ENSDARG00000076765)	TACC1 (ENSDARG00000073753)	ENSDARG00000100139	loxl2a (ENSDARG00000044010)	ENSDARG00000099593	golga7 (ENSDARG00000057676)	sfrp1b (ENSDARG00000057678)	ZMAT4 (ENSDARG00000061419)	tcimb (ENSDARG00000076858)	ppp3ccb (ENSDARG00000057456)	ENSDARG00000027587 ##22	dmtn (ENSDARG00000013110)	pbdc1 (ENSDARG00000057299)	xpo7 (ENSDARG00000005540)	ENSDARG00000116593	GFRA2 (ENSDARG00000044015)	ENSDARG00000111734	ENSDARG00000076949	ENSDARG00000079681	ENSDARG00000078394	atp6v1b2 (ENSDARG00000043465)	vsig8a (ENSDARG00000054050)	ENSDARG00000092976	LRRTM4 (ENSDARG00000080015)	ENSDARG00000075864	tmem230a (ENSDARG00000027687)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	267	ENSGT00940000154816.a.b.h	ENSGT00390000018606.d	ENSGT00940000158832.g.b	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a ##22
Goldfish	MODERN SPECIES	23	gps2 (ENSCARG00000042155)	ENSCARG00000042119	tp53 (ENSCARG00000042080)	capga (ENSCARG00000042009)	ENSCARG00000041999	si:ch211-114c12.2 (ENSCARG00000041975)	mrps31 (ENSCARG00000041960)	slc25a15b (ENSCARG00000041946)	tm4sf21a (ENSCARG00000041862)	mpdu1a (ENSCARG00000041832)	sox19a (ENSCARG00000041817)	eif4a1b (ENSCARG00000041796)	ENSCARG00000041779	ENSCARG00000041454	GALNT9 (ENSCARG00000041273)	ENSCARG00000041261 ##22	piwil2 (ENSCARG00000036203)	slc39a14 (ENSCARG00000039039)	SUSD2 (ENSCARG00000038702)	kremen1 (ENSCARG00000038589)	ZNRF3 (ENSCARG00000038512)	ENSCARG00000038497	si:ch211-244o22.2 (ENSCARG00000038436)	sema4c (ENSCARG00000038403)	ENSCARG00000033583	add2 (ENSCARG00000033338)	ENSCARG00000033325	fabp1a (ENSCARG00000033295)	smyd1a (ENSCARG00000033231)	ABL1 (ENSCARG00000032578)	ddx54 (ENSCARG00000031240)
Cyprininae_a	ANCESTRAL SPECIES	262	ENSGT00940000154816.a.b.h	ENSGT00390000018606.d	ENSGT00940000158832.g.b	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a ##22
Common carp reference	MODERN SPECIES	15	tbx1 (ENSCCRG00000032911)	gnb1l (ENSCCRG00000027647)	TXNRD2 (ENSCCRG00000027633)	ENSCCRG00000033324	TAOK3 (ENSCCRG00000004967)	suds3 (ENSCCRG00000048809)	ENSCCRG00000021246	hspb8 (ENSCCRG00000021250)	ENSCCRG00000000168	xbp1 (ENSCCRG00000070680)	ENSCCRG00000023015	kremen1 (ENSCCRG00000078190)	ENSCCRG00000021240	slc39a14 (ENSCCRG00000073267)	piwil2 (ENSCCRG00000061919)	ENSCCRG00000040060 ##22	ENSCCRG00000071994	ENSCCRG00000069678	chfr (ENSCCRG00000026429)	zdhhc8b (ENSCCRG00000052821)	ascc2 (ENSCCRG00000003192)	ENSCCRG00000011917	ENSCCRG00000012218	TMEM132C (ENSCCRG00000035941)	aacs (ENSCCRG00000000617)	bri3bp (ENSCCRG00000060262)	pgam5 (ENSCCRG00000075649)	ankle2 (ENSCCRG00000044194)	golga3 (ENSCCRG00000015489)	ranbp1 (ENSCCRG00000015384)	ENSCCRG00000027519
Golden-line barbel	MODERN SPECIES	747						ENSSGRG00000028813	hspb8 (ENSSGRG00000028814)	ENSSGRG00000028815	ENSSGRG00000028826	ZNRF3 (ENSSGRG00000028827)	coq5 (ENSSGRG00000028828)	kremen1 (ENSSGRG00000028829)	SUSD2 (ENSSGRG00000028830)	slc39a14 (ENSSGRG00000028831)	piwil2 (ENSSGRG00000028875)	ENSSGRG00000030540 ##22
Cyprininae	ANCESTRAL SPECIES	19	ENSGT00940000158832.g.a	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000015428	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b	ENSGT00950000183200.B.h	ENSGT01010000222287.B.a.a.a.b.e.b ##22	ENSGT00550000074823.b.b.a	ENSGT00940000156599.a	ENSGT00940000160709.z.a	ENSGT00400000022306.e	ENSGT00940000158044.a.a	ENSGT00390000018806.g	ENSGT00550000074823.b.b.b	ENSGT00940000156599.b	ENSGT00940000160709.z.b	ENSGT00400000022306.f	ENSGT00940000158044.a.b	ENSGT00390000018806.h	ENSGT00940000159671	ENSGT00550000074919.n	ENSGT00940000154702.b.f
Goldfish	MODERN SPECIES	44	pebp1 (ENSCARG00000005506)	TAOK3 (ENSCARG00000005361)	suds3 (ENSCARG00000005332)	ENSCARG00000005321	hspb8 (ENSCARG00000005317)	ENSCARG00000005309	ENSCARG00000005294	xbp1 (ENSCARG00000005276)	ENSCARG00000005269	ZNRF3 (ENSCARG00000005245)	coq5 (ENSCARG00000005229)	kremen1 (ENSCARG00000005209)	SUSD2 (ENSCARG00000005104)	slc39a14 (ENSCARG00000005086)	piwil2 (ENSCARG00000004805)	ENSCARG00000004763 ##22	atad1a (ENSCARG00000004751)	ENSCARG00000004745	GALNT9 (ENSCARG00000004702)	DDRGK1 (ENSCARG00000004683)	ENSCARG00000004676	LZTS3 (ENSCARG00000004670)	FASTKD5 (ENSCARG00000004666)	hspa5 (ENSCARG00000004554)	hspa5 (ENSCARG00000004497)	gng10 (ENSCARG00000004488)	RAB35 (ENSCARG00000004476)	ENSCARG00000004473	surf4 (ENSCARG00000004403)	ENSCARG00000004373	ENSCARG00000004353
Cyprininae_a	ANCESTRAL SPECIES	26	ENSGT00390000018606.c	ENSGT00940000158832.g.a	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b	ENSGT00950000183200.B.h	ENSGT01010000222287.B.a.a.a.b.e.b ##22	ENSGT00550000074823.b.b.a	ENSGT00940000156599.a	ENSGT00940000160709.z.a	ENSGT00400000022306.e	ENSGT00940000158044.a.a	ENSGT00390000018806.g	ENSGT00940000159671.b	ENSGT00550000074919.m	ENSGT00940000154702.b.e	ENSGT00940000156044.h	ENSGT00390000002024.g	ENSGT00940000159487	ENSGT00390000004796.a	ENSGT00390000016767.k.a	ENSGT00950000183078.b.b.h
Common carp reference	MODERN SPECIES	7	TXNRD2 (ENSCCRG00000057214)	pebp1 (ENSCCRG00000005062)	TAOK3 (ENSCCRG00000033318)	suds3 (ENSCCRG00000005869)	ENSCCRG00000010420	hspb8 (ENSCCRG00000080290)	ENSCCRG00000010417	xbp1 (ENSCCRG00000044401)	ENSCCRG00000043618	coq5 (ENSCCRG00000055912)	kremen1 (ENSCCRG00000044690)	ENSCCRG00000062505	ENSCCRG00000060093	ENSCCRG00000044630	slc39a14 (ENSCCRG00000044227)	ENSCCRG00000065250 ##22	atad1a (ENSCCRG00000000448)	ENSCCRG00000081388	ENSCCRG00000000434	ENSCCRG00000069022	chfr (ENSCCRG00000054785)	zdhhc8b (ENSCCRG00000017728)	ascc2 (ENSCCRG00000012017)	ENSCCRG00000082112	ENSCCRG00000009935	ENSCCRG00000059244	TMEM132C (ENSCCRG00000051248)	aacs (ENSCCRG00000073357)	bri3bp (ENSCCRG00000064889)	poli (ENSCCRG00000022993)	pgam5 (ENSCCRG00000079084)
Golden-line barbel	MODERN SPECIES	760						hspb8 (ENSSGRG00000051315)	ENSSGRG00000051316	ENSSGRG00000051317	xbp1 (ENSSGRG00000051318)	ZNRF3 (ENSSGRG00000051319)	coq5 (ENSSGRG00000000137)	kremen1 (ENSSGRG00000000141)	SUSD2 (ENSSGRG00000000157)	slc39a14 (ENSSGRG00000000193)	piwil2 (ENSSGRG00000000399)	ENSSGRG00000000862 ##22	atad1a (ENSSGRG00000000863)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	233	ENSGT00530000064873.a	ENSGT00940000156818.mb.a	ENSGT00950000183167.a.b.b.a.d	ENSGT00940000155355.ib.b	ENSGT00940000159772.i	ENSGT00940000156808.u.b	ENSGT00940000156991.a.a.c	ENSGT00390000010398.B.b	ENSGT00940000155874.b.a	ENSGT00530000063711.a	ENSGT00390000000134.b.b.e	ENSGT00940000159875.f.b	ENSGT00940000156888.c.b.a.b	ENSGT00390000003458.n.a	ENSGT00940000154115.d.b	ENSGT01010000222287.B.a.a.a.b.f.a ##22	ENSGT00950000182850.a.b.b.b.b.a	ENSGT00390000016333.a	ENSGT00940000153139.B.a.a	ENSGT00940000159868.b.v.a	ENSGT00940000156168.B.fb.a	ENSGT00630000090221.a.b	ENSGT00630000090221.a.a	ENSGT00940000155068.b.kb	ENSGT00940000165076.b.e	ENSGT00940000166792.a.b	ENSGT00940000154909.b.a.d	ENSGT00940000165064.b.b	ENSGT00390000008694.b.a.a.a	ENSGT00940000166031.b	ENSGT01030000234527.A.a.b.a.a.c.a.d
Cyprininae_a	ANCESTRAL SPECIES	51	ENSGT00530000064873.a	ENSGT00940000156818.mb.a	ENSGT00950000183167.a.b.b.a.d	ENSGT00940000155355.ib.b	ENSGT00940000159772.i	ENSGT00940000156808.u.b	ENSGT00940000156991.a.a.c	ENSGT00390000010398.B.a	ENSGT00940000155874.b.a	ENSGT00530000063711.a	ENSGT00390000000134.b.b.e	ENSGT00940000159875.f.b	ENSGT00940000156888.c.b.a.b	ENSGT00390000003458.n.a	ENSGT00940000154115.d.b	ENSGT01010000222287.B.a.a.a.b.f.a ##22	ENSGT00950000182850.a.b.b.b.b.a	ENSGT00390000016333.a	ENSGT00940000153139.B.a.a	ENSGT00940000159868.b.v.a	ENSGT00940000156168.B.fb.a	ENSGT00630000090221.a.b	ENSGT00630000090221.a.a	ENSGT00940000155068.b.kb	ENSGT00940000165076.b.e	ENSGT00940000166792.a.b	ENSGT00940000154909.b.a.d	ENSGT00940000165064.b.b	ENSGT00390000008694.b.a.a.a	ENSGT00940000166031.b	ENSGT01030000234527.A.a.b.a.a.c.a.d
Golden-line barbel	MODERN SPECIES	77	prnpb (ENSSGRG00000047559)	ENSSGRG00000047557	LETM2 (ENSSGRG00000047556)	ENSSGRG00000047554	plpp5 (ENSSGRG00000047553)	DDHD2 (ENSSGRG00000047469)	ENSSGRG00000047461	ENSSGRG00000047460	loxl2a (ENSSGRG00000047459)	ENSSGRG00000047457	golga7 (ENSSGRG00000047449)	sfrp1b (ENSSGRG00000047446)	ENSSGRG00000047444	tcimb (ENSSGRG00000047442)	ppp3ccb (ENSSGRG00000044443)	ENSSGRG00000044324 ##22	dmtn (ENSSGRG00000044320)	xpo7 (ENSSGRG00000042667)	ENSSGRG00000042631
Common carp reference	MODERN SPECIES	32	rassf2b (ENSCCRG00000078625)	sprn2 (ENSCCRG00000063645)	ENSCCRG00000042394	LETM2 (ENSCCRG00000053301)	ENSCCRG00000042742	plpp5 (ENSCCRG00000045825)	ENSCCRG00000045833	ENSCCRG00000070890	loxl2a (ENSCCRG00000020039)	ENSCCRG00000046071	golga7 (ENSCCRG00000064659)	sfrp1b (ENSCCRG00000062281)	ZMAT4 (ENSCCRG00000061721)	tcimb (ENSCCRG00000053997)	ppp3ccb (ENSCCRG00000014392)	ENSCCRG00000081169 ##22	dmtn (ENSCCRG00000004778)	pbdc1 (ENSCCRG00000079947)	xpo7 (ENSCCRG00000009771)	ENSCCRG00000073924	GFRA2 (ENSCCRG00000021091)	ENSCCRG00000080394	ENSCCRG00000067956	atp6v1b2 (ENSCCRG00000067732)	ENSCCRG00000032035	ENSCCRG00000075542	ENSCCRG00000009920	ENSCCRG00000016277	tmem230a (ENSCCRG00000053370)	ENSCCRG00000016264	dpysl2b (ENSCCRG00000008364)
Goldfish	MODERN SPECIES	28	ENSCARG00000009964	prnpb (ENSCARG00000009971)	ENSCARG00000009976	LETM2 (ENSCARG00000009987)	NSD3 (ENSCARG00000010078)	plpp5 (ENSCARG00000011412)	TACC1 (ENSCARG00000011577)	ENSCARG00000011592	loxl2a (ENSCARG00000011640)	ENSCARG00000012268	golga7 (ENSCARG00000012304)	sfrp1b (ENSCARG00000012324)	ZMAT4 (ENSCARG00000012332)	tcimb (ENSCARG00000012356)	ppp3ccb (ENSCARG00000012508)	ENSCARG00000014684 ##22	dmtn (ENSCARG00000014691)	pbdc1 (ENSCARG00000014717)	xpo7 (ENSCARG00000014751)	ENSCARG00000014804	GFRA2 (ENSCARG00000014815)	ENSCARG00000014828	ENSCARG00000014864	atp6v1b2 (ENSCARG00000014917)	ENSCARG00000015273	ENSCARG00000015296	LRRTM4 (ENSCARG00000015332)	ENSCARG00000015349	tmem230a (ENSCARG00000015406)	ENSCARG00000015414	dpysl2b (ENSCARG00000015461)
Cyprininae	ANCESTRAL SPECIES	242	ENSGT00940000158782.d.b.b	ENSGT00940000158546.`b.a	ENSGT00390000016468.e	ENSGT00940000156818.mb.b	ENSGT00950000183167.a.b.b.a.c	ENSGT00940000155355.ib.a	ENSGT00940000159772.j	ENSGT00940000156808.u.a	ENSGT00940000156991.a.a.d	ENSGT00940000155874.b.b	ENSGT00390000000134.b.b.f	ENSGT00940000159875.f.a	ENSGT00940000156888.c.b.a.a	ENSGT00390000003458.n.b	ENSGT00940000154115.d.a	ENSGT01010000222287.B.a.a.a.b.f.b ##22	ENSGT00950000182850.a.b.b.b.b.b	ENSGT00390000016333.b	ENSGT00940000153139.B.a.b	ENSGT00940000159868.b.v.b	ENSGT00940000156168.B.fb.b	ENSGT00630000090221.b	ENSGT00940000155068.b.jb	ENSGT00940000165076.b.f	ENSGT00940000166792.b	ENSGT00940000154909.b.a.c	ENSGT00940000165064.b.a	ENSGT00390000008694.b.a.a.b	ENSGT00940000166031.a	ENSGT01030000234527.A.a.b.a.a.c.a.c	ENSGT00390000013415.a.b.jb.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1	kcnip3b (ENSCARG00000014591)	rassf2b (ENSCARG00000014656)	ENSCARG00000014666	ENSCARG00000014670	LETM2 (ENSCARG00000014686)	NSD3 (ENSCARG00000014720)	plpp5 (ENSCARG00000014834)	ENSCARG00000014852	ENSCARG00000014922	loxl2a (ENSCARG00000014938)	golga7 (ENSCARG00000015238)	sfrp1b (ENSCARG00000015247)	ZMAT4 (ENSCARG00000015255)	tcimb (ENSCARG00000015259)	ppp3ccb (ENSCARG00000015283)	ENSCARG00000015492 ##22	dmtn (ENSCARG00000015496)	pbdc1 (ENSCARG00000015500)	xpo7 (ENSCARG00000015537)	ENSCARG00000015885	ENSCARG00000015889	ENSCARG00000015895	ENSCARG00000015904	stoml3b (ENSCARG00000015912)	ENSCARG00000016053	vps36 (ENSCARG00000016137)	ENSCARG00000017036	fgl1b (ENSCARG00000017043)	tpte (ENSCARG00000017086)	smpd1 (ENSCARG00000017256)	ilk (ENSCARG00000017272)
Goldfish	MODERN SPECIES	863															ppp3ccb (ENSCARG00000031043)	ENSCARG00000031016 ##22	dmtn (ENSCARG00000030976)
Cyprininae_a	ANCESTRAL SPECIES	198		ENSGT00940000156818.mb.b	ENSGT00950000183167.a.b.b.a.c	ENSGT00940000155355.ib.a	ENSGT00940000159772.j	ENSGT00940000156808.u.a	ENSGT00940000156991.b	ENSGT00390000010398.B.b	ENSGT00940000156991.a.a.d	ENSGT00940000155874.b.b	ENSGT00390000000134.b.b.f	ENSGT00940000159875.f.a	ENSGT00940000156888.c.b.a.a	ENSGT00390000003458.n.b	ENSGT00940000154115.d.a	ENSGT01010000222287.B.a.a.a.b.f.b ##22	ENSGT00950000182850.a.b.b.b.b.b	ENSGT00390000016333.b	ENSGT00940000153139.B.a.b	ENSGT00940000159868.b.v.b	ENSGT00940000156168.B.fb.b	ENSGT00630000090221.b	ENSGT00940000155068.b.jb	ENSGT00940000165076.b.f	ENSGT00940000166792.b	ENSGT00940000154909.b.a.c	ENSGT00940000165064.b.a	ENSGT00390000008694.b.a.a.b	ENSGT00940000166031.a	ENSGT01030000234527.A.a.b.a.a.c.a.c	ENSGT00390000013415.a.b.jb.a
Golden-line barbel	MODERN SPECIES	477				NSD3 (ENSSGRG00000049797)	plpp5 (ENSSGRG00000049987)	DDHD2 (ENSSGRG00000049988)	ENSSGRG00000049992	ENSSGRG00000049993	loxl2a (ENSSGRG00000050018)	ENSSGRG00000050064	golga7 (ENSSGRG00000050065)	sfrp1b (ENSSGRG00000050068)	ZMAT4 (ENSSGRG00000050070)	tcimb (ENSSGRG00000050081)	ppp3ccb (ENSSGRG00000050111)	ENSSGRG00000051798 ##22	dmtn (ENSSGRG00000051812)	pbdc1 (ENSSGRG00000051814)	xpo7 (ENSSGRG00000051819)	ENSSGRG00000051841	GFRA2 (ENSSGRG00000051842)	ENSSGRG00000051843	ENSSGRG00000051844	ENSSGRG00000051847	ENSSGRG00000051849	LRRTM4 (ENSSGRG00000051850)
Common carp reference	MODERN SPECIES	24	rassf2b (ENSCCRG00000026240)	ENSCCRG00000055109	prnpb (ENSCCRG00000026239)	ENSCCRG00000026237	LETM2 (ENSCCRG00000036112)	ENSCCRG00000036208	plpp5 (ENSCCRG00000075763)	ENSCCRG00000019777	ENSCCRG00000019789	loxl2a (ENSCCRG00000045841)	golga7 (ENSCCRG00000009382)	sfrp1b (ENSCCRG00000070080)	ZMAT4 (ENSCCRG00000081719)	tcimb (ENSCCRG00000056440)	ppp3ccb (ENSCCRG00000069326)	ENSCCRG00000016132 ##22	xpo7 (ENSCCRG00000003747)	pbdc1 (ENSCCRG00000074856)	ENSCCRG00000011548	GFRA2 (ENSCCRG00000072166)	ENSCCRG00000074232	atp6v1b2 (ENSCCRG00000075567)	ENSCCRG00000075778	ENSCCRG00000009931	ENSCCRG00000074225	ENSCCRG00000012273	tmem230a (ENSCCRG00000061083)	ENSCCRG00000009907	dpysl2b (ENSCCRG00000060714)	bnip3lb (ENSCCRG00000009630)	ppp2r2ab (ENSCCRG00000053970)
Clupeiformes	ANCESTRAL SPECIES	73	ENSGT00390000007746	ENSGT00390000014148.f	ENSGT00940000156231.o.b	ENSGT00940000158016.c.a.a	ENSGT01100000263542.B.b.a.b	ENSGT00390000012665	ENSGT01080000257442	ENSGT00940000166440	ENSGT00940000156002.a.b	ENSGT00940000155275.c.b.b	ENSGT00940000166112	ENSGT00940000155422.bb	ENSGT00940000159838	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00940000154389.b	ENSGT00900000141073	ENSGT00900000143393	ENSGT00530000063723.a	ENSGT00390000015977	ENSGT00390000012733	ENSGT00940000157027.n.a
Denticle herring	MODERN SPECIES	2	ak8 (ENSDCDG00000035343)	spaca9 (ENSDCDG00000035341)	tsc1a (ENSDCDG00000035340)	grin1b (ENSDCDG00000035326)	entpd2a.1 (ENSDCDG00000035311)	nelfb (ENSDCDG00000035304)	ENSDCDG00000035303	arrdc1a (ENSDCDG00000035302)	ehmt1a (ENSDCDG00000035279)	cacna1ba (ENSDCDG00000028234)	ENSDCDG00000027793	man1b1b (ENSDCDG00000027753)	dpp7 (ENSDCDG00000027641)	slc39a14 (ENSDCDG00000027624)	ENSDCDG00000027620	ENSDCDG00000027618 ##22	atad1a (ENSDCDG00000027615)	GALNT9 (ENSDCDG00000027607)	FBRSL1 (ENSDCDG00000027475)	chfr (ENSDCDG00000027446)	zdhhc8b (ENSDCDG00000027244)	pgam5 (ENSDCDG00000027242)	ankle2 (ENSDCDG00000027240)	golga3 (ENSDCDG00000026465)	RANBP1 (ENSDCDG00000026406)	ENSDCDG00000026403	trmt2a (ENSDCDG00000026030)	dgcr8 (ENSDCDG00000025887)	tango2 (ENSDCDG00000025871)	arvcfb (ENSDCDG00000023289)	TXNRD2 (ENSDCDG00000022996)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000013106	star (ENSCHAG00000014237)	ELMOD3 (ENSCHAG00000014428)	AEBP1 (ENSCHAG00000014474)	pold2 (ENSCHAG00000014807)	entpd2a.1 (ENSCHAG00000014903)	nelfb (ENSCHAG00000014916)	ENSCHAG00000015131	ARRDC1 (ENSCHAG00000015136)	ehmt1a (ENSCHAG00000015331)	cacna1ba (ENSCHAG00000018432)	man1b1b (ENSCHAG00000026632)	dpp7 (ENSCHAG00000026643)	slc39a14 (ENSCHAG00000026673)	piwil2 (ENSCHAG00000026744)	ENSCHAG00000026986 ##22	atad1a (ENSCHAG00000027003)	GALNT9 (ENSCHAG00000027007)	FBRSL1 (ENSCHAG00000027020)	ENSCHAG00000027085	chfr (ENSCHAG00000027104)	zdhhc8b (ENSCHAG00000027188)	pgam5 (ENSCHAG00000027229)	ankle2 (ENSCHAG00000027242)	golga3 (ENSCHAG00000027310)	ranbp1 (ENSCHAG00000027429)	trmt2a (ENSCHAG00000027453)	dgcr8 (ENSCHAG00000027475)	tango2 (ENSCHAG00000027490)	arvcfb (ENSCHAG00000027519)	TXNRD2 (ENSCHAG00000027573)
Atlantic herring	MODERN SPECIES	3	ENSCHAG00000027615	ENSCHAG00000027613	ENSCHAG00000027611	ENSCHAG00000027609	ENSCHAG00000027603	klhl8 (ENSCHAG00000027600)	ENSCHAG00000027598	SLC10A6 (ENSCHAG00000027595)	sdad1 (ENSCHAG00000027579)	golga7 (ENSCHAG00000027571)	sfrp1b (ENSCHAG00000027565)	ENSCHAG00000027561	tcimb (ENSCHAG00000027558)	ENSCHAG00000027554	ppp3ccb (ENSCHAG00000027218)	ENSCHAG00000027119 ##22	ENSCHAG00000027116	dmtn (ENSCHAG00000027108)	pbdc1 (ENSCHAG00000027105)	xpo7 (ENSCHAG00000027068)	ENSCHAG00000027051	GFRA2 (ENSCHAG00000027049)	atp6v1b2 (ENSCHAG00000027018)	stambpa (ENSCHAG00000027000) ##36	dusp11 (ENSCHAG00000026994)	ENSCHAG00000026989	tcf7l1a (ENSCHAG00000026970)	dbnla (ENSCHAG00000026964)	cox5ba (ENSCHAG00000026961)	npy8ar (ENSCHAG00000026959)	marchf5l (ENSCHAG00000026958) ##12
Osteoglossiformes	ANCESTRAL SPECIES	73	ENSGT00390000001098	ENSGT00940000156811.b	ENSGT00450000040324.b.h	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a	ENSGT00940000159875	ENSGT00940000156888.b	ENSGT00390000003458	ENSGT00940000156716	ENSGT00940000166302	ENSGT00940000154115.d	ENSGT00940000157986	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b ##22	ENSGT00550000074823.b.b	ENSGT00940000156239.e	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b.b.a	ENSGT00940000167390	ENSGT00940000154078.a.b	ENSGT00940000155068.b	ENSGT00940000153710.a ##36	ENSGT00530000064712	ENSGT00940000157038.b	ENSGT00940000160915	ENSGT00940000156732.a.b.f	ENSGT00940000163584.b.b	ENSGT00940000164226.a.a
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	3	UNC5D (ENSSFOG00015020422)	ENSSFOG00015028330	cyb561a3a (ENSSFOG00015013371)	ENSSFOG00015028024	histh1l1 (ENSSFOG00015026191)	loxl2b (ENSSFOG00015013260)	GOLGA7 (ENSSFOG00015027248)	sfrp1a (ENSSFOG00015013195)	ZMAT4 (ENSSFOG00015013158)	tcima (ENSSFOG00015013141)	adam28 (ENSSFOG00015013111)	ppp3cca (ENSSFOG00015025342)	ENSSFOG00015013095	slc39a14 (ENSSFOG00015031910)	piwil2 (ENSSFOG00015012930)	ENSSFOG00015012922 ##22	atad1a (ENSSFOG00015012892)	adam9 (ENSSFOG00015012841)	nudt18 (ENSSFOG00015024866)	fhip2b (ENSSFOG00015012804)	ENSSFOG00015012789	DMTN (ENSSFOG00015012714)	fgf17 (ENSSFOG00015028120)	kazald3 (ENSSFOG00015012677)	DOK2 (ENSSFOG00015012656)	GFRA2 (ENSSFOG00015025997)	LZTS1 (ENSSFOG00015012625)	atp6v1b2 (ENSSFOG00015012573)	stambpa (ENSSFOG00015012531) ##36	ENSSFOG00015012518	TCF7L1 (ENSSFOG00015012463)
Asian bonytongue	MODERN SPECIES	21	ENSSFOG00015015243	PIP5KL1 (ENSSFOG00015015251)	dpm2 (ENSSFOG00015033056)	ENSSFOG00015015295	eeig1b (ENSSFOG00015025518)	NAIF1 (ENSSFOG00015015307)	slc25a25b (ENSSFOG00015030265)	uap1l1 (ENSSFOG00015015353)	zdhhc12b (ENSSFOG00015015374)	ENSSFOG00015015387	sfrp1b (ENSSFOG00015015426)	ENSSFOG00015015440	ENSSFOG00015025014	TCIM (ENSSFOG00015015559)	ppp3ccb (ENSSFOG00015015580)	ENSSFOG00015015649 ##22	ENSSFOG00015015665	adam9 (ENSSFOG00015015739)	dmtn (ENSSFOG00015015782)	pbdc1 (ENSSFOG00015015830)	xpo7 (ENSSFOG00015015859)	GFRA2 (ENSSFOG00015015943)	dusp11 (ENSSFOG00015025576)	ENSSFOG00015004317	ENSSFOG00015025286	ENSSFOG00015004391	tcf7l1a (ENSSFOG00015004425)	ENSSFOG00015026787	DBNL (ENSSFOG00015004574)	cox5ba (ENSSFOG00015004590)	npy8ar (ENSSFOG00015004598)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	33	tm2d2 (ENSPKIG00000000265)	HTRA4 (ENSPKIG00000000240)	UNC5D (ENSPKIG00000000182)	ENSPKIG00000000137	cyb561a3a (ENSPKIG00000000129)	histh1l1 (ENSPKIG00000000121)	loxl2b (ENSPKIG00000000099)	ENSPKIG00000000078	GOLGA7 (ENSPKIG00000000067)	sfrp1a (ENSPKIG00000000058)	ENSPKIG00000000048	tcima (ENSPKIG00000000036)	adam28 (ENSPKIG00000000009)	ppp3ccb (ENSPKIG00000025620)	slc39a14 (ENSPKIG00000025065)	ENSPKIG00000025055 ##22	piwil2 (ENSPKIG00000025025)	atad1a (ENSPKIG00000025007)	adam9 (ENSPKIG00000024992)	nudt18 (ENSPKIG00000024982)	fhip2b (ENSPKIG00000024972)	ENSPKIG00000024964	DMTN (ENSPKIG00000024958)	ENSPKIG00000024950	fgf17 (ENSPKIG00000024947)	kazald3 (ENSPKIG00000024942)	DOK2 (ENSPKIG00000024935)	GFRA2 (ENSPKIG00000024932)	ENSPKIG00000024925	LZTS1 (ENSPKIG00000024916)	atp6v1b2 (ENSPKIG00000024905)
P. kingsleyae	MODERN SPECIES	2	ENSPKIG00000021405	ENSPKIG00000021414	ENSPKIG00000021435	PIP5KL1 (ENSPKIG00000021448)	dpm2 (ENSPKIG00000021474)	eeig1b (ENSPKIG00000021496)	slc25a25b (ENSPKIG00000021548)	uap1l1 (ENSPKIG00000021613)	zdhhc12b (ENSPKIG00000021757)	ENSPKIG00000021680	SFRP1 (ENSPKIG00000021780)	ENSPKIG00000021792	tcimb (ENSPKIG00000021807)	ENSPKIG00000021825	ENSPKIG00000021868	ENSPKIG00000021937 ##22	ENSPKIG00000021949	rab36 (ENSPKIG00000021975)	DEPDC5 (ENSPKIG00000022014)	ywhah (ENSPKIG00000022072)	slc5a1 (ENSPKIG00000022197)	RNF208 (ENSPKIG00000022439)	nt5c2l1 (ENSPKIG00000022472)	slc2a11l (ENSPKIG00000022531)	drg1 (ENSPKIG00000022572)	STARD7 (ENSPKIG00000022629)	SLC20A1 (ENSPKIG00000022658)	gmcl1 (ENSPKIG00000022681)	fam136a (ENSPKIG00000022708)	pcyox1 (ENSPKIG00000022738)	DTWD2 (ENSPKIG00000022765)
Spotted gar	MODERN SPECIES	647	cyb561a3a (ENSLOCG00000015453)	drd7 (ENSLOCG00000017983)	loxl2b (ENSLOCG00000015445)	ENSLOCG00000015442	golga7 (ENSLOCG00000015441)	sfrp1a (ENSLOCG00000015437)	ENSLOCG00000015436	ENSLOCG00000017982	ZMAT4 (ENSLOCG00000015435)	tcima (ENSLOCG00000017981)	adam28 (ENSLOCG00000015430)	adam28 (ENSLOCG00000015424)	ppp3ccb (ENSLOCG00000015419)	slc39a14 (ENSLOCG00000015416)	piwil2 (ENSLOCG00000015407)	ENSLOCG00000015406 ##22	atad1a (ENSLOCG00000015404)	adam9 (ENSLOCG00000015391)	nudt18 (ENSLOCG00000015389)	fhip2b (ENSLOCG00000015384)	mob1a (ENSLOCG00000015380)	mthfd2 (ENSLOCG00000015377)	SLC4A5 (ENSLOCG00000015371)	zgc:110329 (ENSLOCG00000015369)	tacr1b (ENSLOCG00000015367)	ncaph (ENSLOCG00000015362)	vamp5 (ENSLOCG00000015361)	rnf181 (ENSLOCG00000015359)	tmem150aa (ENSLOCG00000015355)	ENSLOCG00000015351	cds2 (ENSLOCG00000015345)
Reedfish	MODERN SPECIES	199																ENSECRG00000015709 ##22	atad1a (ENSECRG00000015678)	ENSECRG00000015652
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.a.b ##22
Coelacanth	MODERN SPECIES	1074										ADRA1A (ENSLACG00000001634)	GINS4 (ENSLACG00000002683)	ENSLACG00000003567 #17	GPAT4 (ENSLACG00000004341)	inpp5l (ENSLACG00000006453)	NKX6-3 (ENSLACG00000007531)	ENSLACG00000007839 ##22	KAT6A (ENSLACG00000009523)	ANK1 (ENSLACG00000012105)	AP3M2 (ENSLACG00000012997)	PLAT (ENSLACG00000013211)
Elephant shark	MODERN SPECIES	1728			ENSCMIG00000016816	unc5da (ENSCMIG00000016793)	npy8br (ENSCMIG00000016784)	ENSCMIG00000016782	chmp7 (ENSCMIG00000016781)	lgi3 (ENSCMIG00000016773)	neflb (ENSCMIG00000016740)	gatd3l (ENSCMIG00000016719)	gins4 (ENSCMIG00000016715)	ENSCMIG00000016714 #17	cox5ba (ENSCMIG00000016695)	gpat4 (ENSCMIG00000016659)	ENSCMIG00000016651	ENSCMIG00000016650 ##22	sema4c (ENSCMIG00000016648)	ENSCMIG00000016643	ENSCMIG00000016640	REEP4 (ENSCMIG00000016636)	ENSCMIG00000016634
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.b ##22
Euteleostomi	ANCESTRAL SPECIES	142							ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00910000144159.A	ENSGT00390000008711	ENSGT00940000159032	ENSGT00390000010888	ENSGT00390000005650	ENSGT00510000048167.b.a	ENSGT00940000155068.b	ENSGT00940000161043	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00390000005739.a.a ##8	ENSGT00800000124060.A.a ##7	ENSGT00940000156187	ENSGT00940000153322.A
Sarcopterygii	ANCESTRAL SPECIES	129	ENSGT00800000124060.A.a ##7	ENSGT00390000005739.a.a ##8	ENSGT00440000033609	ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00940000159032	ENSGT00390000008711	ENSGT00910000144159.A.a	ENSGT00940000158524	ENSGT00390000013178	ENSGT01030000234518.A.a.a	ENSGT00940000165044	ENSGT00950000182859.A.a.a.a	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.b	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000005119	ENSGT00390000015020	ENSGT00940000159585	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00950000182934.a.a
Amniota	ANCESTRAL SPECIES	2	ENSGT00910000144159.A.a	ENSGT00940000158524	ENSGT00390000013178	ENSGT00940000165044	ENSGT00950000182859.A.a.a.a	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.a.a	ENSGT00940000179269	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00940000169304	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705	ENSGT01030000234543.A.a
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000179269	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511
Lepidosauria	ANCESTRAL SPECIES	25	ENSGT00390000002231.f	ENSGT00390000003896	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000179269	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000002231.e	ENSGT00390000002231.f	ENSGT00390000003896	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Laterata	ANCESTRAL SPECIES	9	ENSGT00950000182932.A.b.a.a.b	ENSGT00390000002231.e	ENSGT00390000003896	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832.db.b	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT00510000049555	ENSGT01030000234607.A.a.b.b	ENSGT00390000004511.c.a	ENSGT00390000004511.d.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Common wall lizard	MODERN SPECIES	17	SMYD5 (ENSPMRG00000010384)	PRADC1 (ENSPMRG00000010372)	ENSPMRG00000010354	ENSPMRG00000010474	EGR4 (ENSPMRG00000010467)	ENSPMRG00000010461	ADAM33 (ENSPMRG00000010438)	ENSPMRG00000010422	GFRA4 (ENSPMRG00000010413)	ATRN (ENSPMRG00000010052)	ENSPMRG00000009945	ENSPMRG00000009935	DNAAF9 (ENSPMRG00000009917)	ENSPMRG00000009907	SLC4A11 (ENSPMRG00000009882)	ENSPMRG00000009871 ##22	ENSPMRG00000009865	DDRGK1 (ENSPMRG00000009856)	LZTS3 (ENSPMRG00000009849)	FASTKD5 (ENSPMRG00000009843)	ENSPMRG00000009837	ENSPMRG00000009829	ENSPMRG00000009824	ENSPMRG00000009819	MRPS26 (ENSPMRG00000009815)	ENSPMRG00000009810	ENSPMRG00000009804	PTPRA (ENSPMRG00000009798)	ENSPMRG00000009793	ENSPMRG00000009787	ENSPMRG00000009782
Argentine black and white tegu	MODERN SPECIES	71	ENSSMRG00000000183	ENSSMRG00000000181	VPS16 (ENSSMRG00000000098)	SMYD5 (ENSSMRG00000000050)	PRADC1 (ENSSMRG00000000043)	CCT7 (ENSSMRG00000018128)	FBXO41 (ENSSMRG00000018125)	EGR4 (ENSSMRG00000018124)	ENSSMRG00000018119	ADAM33 (ENSSMRG00000018115)	GFRA4 (ENSSMRG00000018110)	ATRN (ENSSMRG00000017862)	DNAAF9 (ENSSMRG00000017855)	ENSSMRG00000017854	SLC4A11 (ENSSMRG00000017852)	ENSSMRG00000017850 ##22	ENSSMRG00000017849	ENSSMRG00000017848	LZTS3 (ENSSMRG00000017843)	UBOX5 (ENSSMRG00000017840)	ENSSMRG00000017839	ENSSMRG00000017838	MRPS26 (ENSSMRG00000017837)	ENSSMRG00000017836	PTPRA (ENSSMRG00000017830)	PANK2 (ENSSMRG00000017826)	RNF24 (ENSSMRG00000017822)	SMOX (ENSSMRG00000017820)	ADRA1D (ENSSMRG00000017818)	ENSSMRG00000017808	CTNNA2 (ENSSMRG00000017807)
Toxicofera	ANCESTRAL SPECIES	12	ENSGT00950000182859.A.a.a.a	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.a.a	ENSGT00390000002231.f	ENSGT00390000003896	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00990000211972	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Elapidae	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.b ##22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.b ##22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT01010000222287.B.a.a.b ##22
Mainland tiger snake	MODERN SPECIES	1908																ENSNSUG00000001225 ##22
Eastern brown snake	MODERN SPECIES	1431																ENSPTXG00000017463 ##22
Blue-lipped sea krait	MODERN SPECIES	2833																ENSLLTG00000002317 ##22
Lizard	MODERN SPECIES	915								ENSACAG00000037241	GFRA4 (ENSACAG00000004532)	ATRN (ENSACAG00000004189)	DNAAF9 (ENSACAG00000003970)	ENSACAG00000037157	ENSACAG00000003965	ENSACAG00000028286	SLC4A11 (ENSACAG00000003941)	ENSACAG00000028070 ##22	ENSACAG00000029281	ENSACAG00000025768	ENSACAG00000003914
tuatara	MODERN SPECIES	716									GFRA4 (ENSSPUG00000007203)	ATRN (ENSSPUG00000006954)	DNAAF9 (ENSSPUG00000006813)	ENSSPUG00000006777	ENSSPUG00000006769	ENSSPUG00000006756	SLC4A11 (ENSSPUG00000006639)	ENSSPUG00000006589 ##22	DDRGK1 (ENSSPUG00000006569)	LZTS3 (ENSSPUG00000006557)
Archelosauria	ANCESTRAL SPECIES	4	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626
Cryptodira	ANCESTRAL SPECIES	2	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443
Testudinoidea	ANCESTRAL SPECIES	37	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT00510000049555	ENSGT01030000234607.A.a.b.b	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443
Emydidae	ANCESTRAL SPECIES	1	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00390000015020	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511
Three-toed box turtle	MODERN SPECIES	26														DNAAF9 (ENSTMTG00000001132)	SLC4A11 (ENSTMTG00000000726)	ENSTMTG00000000693 ##22	ENSTMTG00000000687	ENSTMTG00000000681	LZTS3 (ENSTMTG00000000658)	UBOX5 (ENSTMTG00000000649)	ENSTMTG00000000623	ENSTMTG00000000607	MRPS26 (ENSTMTG00000000595)	ENSTMTG00000000589	PTPRA (ENSTMTG00000000564)	ENSTMTG00000000546	ENSTMTG00000000531	ENSTMTG00000000525	RNF24 (ENSTMTG00000000512)	SMOX (ENSTMTG00000000499)	ADRA1D (ENSTMTG00000000479)
painted turtle	MODERN SPECIES	722	RAB11FIP5 (ENSCPBG00000024510)	ENSCPBG00000024511	ENSCPBG00000024512	SMYD5 (ENSCPBG00000024513)	PRADC1 (ENSCPBG00000024514)	CCT7 (ENSCPBG00000024515)	FBXO41 (ENSCPBG00000024517)	EGR4 (ENSCPBG00000024519)	ENSCPBG00000024520	ADAM33 (ENSCPBG00000024521)	GFRA4 (ENSCPBG00000024526)	ATRN (ENSCPBG00000024528)	DNAAF9 (ENSCPBG00000024533)	ENSCPBG00000024539	SLC4A11 (ENSCPBG00000024543)	ENSCPBG00000024548 ##22	ENSCPBG00000024549	ENSCPBG00000024552	DDRGK1 (ENSCPBG00000024557)	LZTS3 (ENSCPBG00000024563)	UBOX5 (ENSCPBG00000024564)	ENSCPBG00000024565	ENSCPBG00000024566	MRPS26 (ENSCPBG00000024567)	ENSCPBG00000024568	PTPRA (ENSCPBG00000024572)	ENSCPBG00000024583	PANK2 (ENSCPBG00000024586)	RNF24 (ENSCPBG00000024591)	SMOX (ENSCPBG00000024600)	ADRA1D (ENSCPBG00000024606)
Testudinidae	ANCESTRAL SPECIES	31	ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00940000154078.b	ENSGT00510000049555	ENSGT01030000234607.A.a.b.b	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Abingdon island giant tortoise	MODERN SPECIES	2230														ENSCABG00000010690	SLC4A11 (ENSCABG00000010686)	ENSCABG00000010685 ##22	ENSCABG00000010684	ENSCABG00000010683	LZTS3 (ENSCABG00000010682)	UBOX5 (ENSCABG00000010667)	ENSCABG00000010665	ENSCABG00000010660	ENSCABG00000010659	ENSCABG00000010657	PTPRA (ENSCABG00000010656)
Goode s thornscrub tortoise	MODERN SPECIES	19	SFXN5 (ENSGEVG00005020722)	RAB11FIP5 (ENSGEVG00005020732)	ENSGEVG00005020741	ENSGEVG00005020742	SMYD5 (ENSGEVG00005020747)	PRADC1 (ENSGEVG00005020752)	CCT7 (ENSGEVG00005020754)	FBXO41 (ENSGEVG00005020758)	ENSGEVG00005020761	ENSGEVG00005020764	ADAM33 (ENSGEVG00005020788)	GFRA4 (ENSGEVG00005020816)	ATRN (ENSGEVG00005020826)	DNAAF9 (ENSGEVG00005020841)	SLC4A11 (ENSGEVG00005020858)	ENSGEVG00005020869 ##22	ENSGEVG00005020872	ENSGEVG00005020876	LZTS3 (ENSGEVG00005020877)	UBOX5 (ENSGEVG00005020879)	FASTKD5 (ENSGEVG00005020882)	ENSGEVG00005020885	ENSGEVG00005020891	MRPS26 (ENSGEVG00005020893)	ENSGEVG00005020896	PTPRA (ENSGEVG00005020899)	ENSGEVG00005020905	ENSGEVG00005020907	ENSGEVG00005020910	RNF24 (ENSGEVG00005020916)	SMOX (ENSGEVG00005020920)
Chinese turtle	MODERN SPECIES	2247										GFRA4 (ENSPSIG00000014692)	ATRN (ENSPSIG00000010130)	DNAAF9 (ENSPSIG00000008406)	ENSPSIG00000008300	ENSPSIG00000000029	SLC4A11 (ENSPSIG00000007341)	ENSPSIG00000007238 ##22	ENSPSIG00000007134	ENSPSIG00000006882	DDRGK1 (ENSPSIG00000006239)	LZTS3 (ENSPSIG00000005827)	FASTKD5 (ENSPSIG00000005703)	UBOX5 (ENSPSIG00000017071)	ENSPSIG00000016636	ENSPSIG00000016615	MRPS26 (ENSPSIG00000016604)	ENSPSIG00000016460	PTPRA (ENSPSIG00000012279)	ENSPSIG00000011448	PANK2 (ENSPSIG00000010634)	SMOX (ENSPSIG00000010065)	ADRA1D (ENSPSIG00000009971)
Archosauria	ANCESTRAL SPECIES	1	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00940000169304	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00960000188573	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443
Aves	ANCESTRAL SPECIES	3	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705
Neognathae	ANCESTRAL SPECIES	5	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000179269	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000179269	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT01000000216731	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795
Golden eagle	MODERN SPECIES		SFXN5 (ENSACCG00020000028)	RAB11FIP5 (ENSACCG00020000029)	ENSACCG00020000030	SMYD5 (ENSACCG00020000031)	PRADC1 (ENSACCG00020000032)	CCT7 (ENSACCG00020000033)	FBXO41 (ENSACCG00020000034)	EGR4 (ENSACCG00020000035)	ENSACCG00020000036	ADAM33 (ENSACCG00020000037)	GFRA4 (ENSACCG00020000038)	ATRN (ENSACCG00020000039)	ENSACCG00020000040	DNAAF9 (ENSACCG00020000041)	SLC4A11 (ENSACCG00020000042)	ENSACCG00020000043 ##22	DDRGK1 (ENSACCG00020000044)	LZTS3 (ENSACCG00020000045)	FASTKD5 (ENSACCG00020000046)	UBOX5 (ENSACCG00020000047)	ENSACCG00020000048	MRPS26 (ENSACCG00020000049)	ENSACCG00020000050	ENSACCG00020000051	PTPRA (ENSACCG00020000052)	ENSACCG00020000053	PANK2 (ENSACCG00020000054)	RNF24 (ENSACCG00020000055)	ENSACCG00020000056	SMOX (ENSACCG00020000057)	ADRA1D (ENSACCG00020000058)
Kakapo	MODERN SPECIES	24	SFXN5 (ENSSHBG00005020144)	RAB11FIP5 (ENSSHBG00005020146)	ENSSHBG00005020150	ENSSHBG00005020152	SMYD5 (ENSSHBG00005020154)	PRADC1 (ENSSHBG00005020157)	CCT7 (ENSSHBG00005020163)	FBXO41 (ENSSHBG00005020167)	EGR4 (ENSSHBG00005020171)	ENSSHBG00005020173	ADAM33 (ENSSHBG00005020182)	GFRA4 (ENSSHBG00005020203)	ATRN (ENSSHBG00005020216)	DNAAF9 (ENSSHBG00005020232)	SLC4A11 (ENSSHBG00005020277)	ENSSHBG00005020351 ##22	DDRGK1 (ENSSHBG00005020356)	LZTS3 (ENSSHBG00005020359)	UBOX5 (ENSSHBG00005020370)	ENSSHBG00005020379	ENSSHBG00005020382	MRPS26 (ENSSHBG00005020387)	ENSSHBG00005020390	PTPRA (ENSSHBG00005020398)	ENSSHBG00005020409	PANK2 (ENSSHBG00005020417)	RNF24 (ENSSHBG00005020422)	SMOX (ENSSHBG00005020429)	ADRA1D (ENSSHBG00005020434)	CTNNA2 (ENSSHBG00005020441)	LRRTM1 (ENSSHBG00005020452)
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00390000009871	ENSGT00940000161036.A	ENSGT00940000162295	ENSGT00940000159651	ENSGT01020000230835	ENSGT00940000159579	ENSGT01100000263905	ENSGT00390000016110	ENSGT00940000155108	ENSGT00940000158157.k.b	ENSGT00390000007726.b	ENSGT00940000155980.A	ENSGT00390000005656	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT01000000216408	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000162295	ENSGT00940000159651	ENSGT01020000230835	ENSGT00940000159579	ENSGT01100000263905	ENSGT00390000016110	ENSGT00940000158157.l	ENSGT00390000007726.b.a	ENSGT00940000155108	ENSGT00940000158157.k.b	ENSGT00390000007726.b.b	ENSGT00940000155980.A	ENSGT00390000005656	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT01000000216408	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a
Flycatcher	MODERN SPECIES	22		ENSFALG00000010906	ENSFALG00000026770	DQX1 (ENSFALG00000010921)	ENSFALG00000010969	AUP1 (ENSFALG00000011055)	LOXL3 (ENSFALG00000006467)	ENSFALG00000006481	HTRA2 (ENSFALG00000025506)	ENSFALG00000027070	DOK1 (ENSFALG00000006512)	M1AP (ENSFALG00000006530)	DNAAF9 (ENSFALG00000006540)	SLC4A11 (ENSFALG00000006547)	ENSFALG00000024059	ENSFALG00000006551 ##22	ENSFALG00000025605	LZTS3 (ENSFALG00000006569)	FASTKD5 (ENSFALG00000006577)	UBOX5 (ENSFALG00000006574)	ENSFALG00000000220	ENSFALG00000025636	ENSFALG00000000213	ENSFALG00000027129	ENSFALG00000000197	MAVS (ENSFALG00000024331)	ENSFALG00000000184	RNF24 (ENSFALG00000026513)	SMOX (ENSFALG00000000170)	ADRA1D (ENSFALG00000023284)	ENSFALG00000000165
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00390000009871	ENSGT00940000161036.A	ENSGT00940000162295	ENSGT00940000159651	ENSGT01020000230835	ENSGT00940000159579	ENSGT01100000263905	ENSGT00390000016110	ENSGT00940000155108	ENSGT00940000158157.k.b	ENSGT00390000007726.b.b	ENSGT00940000155980.A	ENSGT00390000005656	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT01000000216408	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a
Medium ground finch	MODERN SPECIES	248					ENSGFOG00000011315	AUP1 (ENSGFOG00000011311)	HTRA2 (ENSGFOG00000011309)	ENSGFOG00000011307	ENSGFOG00000011305	ENSGFOG00000011303	ENSGFOG00000011297	DOK1 (ENSGFOG00000011293)	ENSGFOG00000011291	DNAAF9 (ENSGFOG00000010739)	SLC4A11 (ENSGFOG00000010572)	ENSGFOG00000010558 ##22	DDRGK1 (ENSGFOG00000010551)	LZTS3 (ENSGFOG00000010497)	FASTKD5 (ENSGFOG00000010491)	UBOX5 (ENSGFOG00000010488)
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00390000009871	ENSGT00940000161036.A	ENSGT00940000162295	ENSGT00940000159651	ENSGT01020000230835	ENSGT00940000159579	ENSGT01100000263905	ENSGT00390000016110	ENSGT00940000155108	ENSGT00940000158157.k.b	ENSGT00390000007726.b.b	ENSGT00940000155980.A	ENSGT00390000005656	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT01000000216408	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT01100000264902	ENSGT00940000157511	ENSGT00940000160795
Zebra finch	MODERN SPECIES	25	DQX1 (ENSTGUG00000019077)	ENSTGUG00000011059	ENSTGUG00000022013	ENSTGUG00000027161	ENSTGUG00000011053	LOXL3 (ENSTGUG00000011039)	AUP1 (ENSTGUG00000011046)	ENSTGUG00000014680	ENSTGUG00000011033	DOK1 (ENSTGUG00000022228)	ENSTGUG00000021609	ENSTGUG00000022017	DNAAF9 (ENSTGUG00000011007)	ENSTGUG00000024801	SLC4A11 (ENSTGUG00000011004)	ENSTGUG00000019549 ##22	DDRGK1 (ENSTGUG00000010991)	LZTS3 (ENSTGUG00000025707)	UBOX5 (ENSTGUG00000010984)	ENSTGUG00000029561	ENSTGUG00000010980	ENSTGUG00000010977	ENSTGUG00000024049	PTPRA (ENSTGUG00000010958)	ENSTGUG00000010956	PANK2 (ENSTGUG00000010948)	RNF24 (ENSTGUG00000025673)	ENSTGUG00000021011	SMOX (ENSTGUG00000010936)	ADRA1D (ENSTGUG00000021977)	CTNNA2 (ENSTGUG00000010908)
Common canary	MODERN SPECIES	57		TTC31 (ENSSCAG00000009548)	LBX2 (ENSSCAG00000009558)	PCGF1 (ENSSCAG00000009563)	ENSSCAG00000009566	DQX1 (ENSSCAG00000009580)	ENSSCAG00000009654	AUP1 (ENSSCAG00000009854)	HTRA2 (ENSSCAG00000009862)	LOXL3 (ENSSCAG00000009871)	ENSSCAG00000009878	DOK1 (ENSSCAG00000009890)	M1AP (ENSSCAG00000009898)	DNAAF9 (ENSSCAG00000009906)	SLC4A11 (ENSSCAG00000009916)	ENSSCAG00000009937 ##22	DDRGK1 (ENSSCAG00000009947)	LZTS3 (ENSSCAG00000009970)	FASTKD5 (ENSSCAG00000009976)	UBOX5 (ENSSCAG00000009983)	ENSSCAG00000009986	ENSSCAG00000009991	ENSSCAG00000009999	PTPRA (ENSSCAG00000010005)	ENSSCAG00000010023	PANK2 (ENSSCAG00000010049)	RNF24 (ENSSCAG00000010081)	ENSSCAG00000010085	SMOX (ENSSCAG00000010088)	ADRA1D (ENSSCAG00000010092)	ENSSCAG00000010096
Great tit	MODERN SPECIES	23	LBX2 (ENSPMJG00000018656)	PCGF1 (ENSPMJG00000018655)	ENSPMJG00000018654	ENSPMJG00000018653	DQX1 (ENSPMJG00000018652)	ENSPMJG00000018651	ENSPMJG00000018563	AUP1 (ENSPMJG00000018562)	HTRA2 (ENSPMJG00000018561)	LOXL3 (ENSPMJG00000018560)	ENSPMJG00000018559	DOK1 (ENSPMJG00000018558)	M1AP (ENSPMJG00000018557)	DNAAF9 (ENSPMJG00000018555)	SLC4A11 (ENSPMJG00000018553)	ENSPMJG00000018552 ##22	DDRGK1 (ENSPMJG00000018549)	LZTS3 (ENSPMJG00000018546)	FASTKD5 (ENSPMJG00000018545)	UBOX5 (ENSPMJG00000018544)	ENSPMJG00000018543	ENSPMJG00000018542	ENSPMJG00000018541	ENSPMJG00000018540	PTPRA (ENSPMJG00000017397)	PANK2 (ENSPMJG00000017376)	RNF24 (ENSPMJG00000017373)	SMOX (ENSPMJG00000017366)	ADRA1D (ENSPMJG00000017365)	CTNNA2 (ENSPMJG00000017364)	LRRTM1 (ENSPMJG00000017363)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000161476	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00940000169304	ENSGT00940000154078.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351
Pink-footed goose	MODERN SPECIES	7	ENSABRG00000016170	ENSABRG00000016168	ENSABRG00000016165	SMYD5 (ENSABRG00000016035)	PRADC1 (ENSABRG00000015993)	CCT7 (ENSABRG00000015983)	FBXO41 (ENSABRG00000015968)	EGR4 (ENSABRG00000015962)	ENSABRG00000015960	ENSABRG00000015940	ADAM33 (ENSABRG00000015781)	GFRA4 (ENSABRG00000015770)	ATRN (ENSABRG00000015329)	DNAAF9 (ENSABRG00000015118)	SLC4A11 (ENSABRG00000015040)	ENSABRG00000015033 ##22	ENSABRG00000015028	LZTS3 (ENSABRG00000015027)	UBOX5 (ENSABRG00000015026)	ENSABRG00000015017	ENSABRG00000015016	ENSABRG00000015014	PTPRA (ENSABRG00000015005)	ENSABRG00000014984	PANK2 (ENSABRG00000014973)	RNF24 (ENSABRG00000014967)	SMOX (ENSABRG00000014963)	ADRA1D (ENSABRG00000014961)	CTNNA2 (ENSABRG00000014927)	LRRTM1 (ENSABRG00000014922)	ENSABRG00000013837
Duck	MODERN SPECIES	22	ZNF638 (ENSAPLG00000019837)	EXOC6B (ENSAPLG00000006898) ##8	ENSAPLG00000018061	SFXN5 (ENSAPLG00000005231)	ENSAPLG00000027296	ENSAPLG00000018305	ENSAPLG00000021748	FBXO41 (ENSAPLG00000014918)	ENSAPLG00000023116	ENSAPLG00000021920	ADAM33 (ENSAPLG00000005645)	GFRA4 (ENSAPLG00000005430)	ATRN (ENSAPLG00000004965)	DNAAF9 (ENSAPLG00000004579)	SLC4A11 (ENSAPLG00000004523)	ENSAPLG00000028920 ##22	ENSAPLG00000026990	UBOX5 (ENSAPLG00000004151)	ENSAPLG00000025526	ENSAPLG00000027783	ENSAPLG00000003359	SMOX (ENSAPLG00000003135)	ENSAPLG00000029627
Phasianidae	ANCESTRAL SPECIES	2	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b.e	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT01030000234641.a.a	ENSGT00940000158783	ENSGT00940000154361.B	ENSGT00510000047420	ENSGT00390000009837	ENSGT00550000074832	ENSGT00530000063713.b.a	ENSGT00940000162199	ENSGT00940000153123.B	ENSGT00940000158971	ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00390000017193	ENSGT00940000154078.b.e	ENSGT01030000234607.A.a.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a	ENSGT00390000004511.d	ENSGT00390000008453	ENSGT00940000159585	ENSGT01050000245143	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a	ENSGT00940000161705
Chicken	MODERN SPECIES	33	RAB11FIP5 (ENSGALG00010018302)	GNOT2 (ENSGALG00010018266)	NOTO (ENSGALG00010018247)	SMYD5 (ENSGALG00010018231)	PRADC1 (ENSGALG00010018179)	CCT7 (ENSGALG00010018163)	FBXO41 (ENSGALG00010018124)	EGR4 (ENSGALG00010018098)	ENSGALG00010018087	ADAM33 (ENSGALG00010018068)	GFRA4 (ENSGALG00010018048)	ATRN (ENSGALG00010018021)	DNAAF9 (ENSGALG00010018007)	ENSGALG00010017995	SLC4A11 (ENSGALG00010017983)	HTR7L (ENSGALG00010017901) ##22	DDRGK1 (ENSGALG00010017886)	LZTS3 (ENSGALG00010017882)	FASTKD5 (ENSGALG00010017856)	UBOX5 (ENSGALG00010017865)	AVP (ENSGALG00010016587)	OXT (ENSGALG00010016585)	MRPS26 (ENSGALG00010016576)	PTPRA (ENSGALG00010016549)	MAVS (ENSGALG00010016469)	PANK2 (ENSGALG00010016464)	RNF24 (ENSGALG00010016462)	SMOX (ENSGALG00010016457)	ADRA1D (ENSGALG00010016428)	ENSGALG00010018537	LRRTM1 (ENSGALG00010016791)
Japanese quail	MODERN SPECIES	22	RAB11FIP5 (ENSCJPG00005007893)	ENSCJPG00005007890	ENSCJPG00005007887	SMYD5 (ENSCJPG00005007833)	PRADC1 (ENSCJPG00005007832)	CCT7 (ENSCJPG00005007831)	FBXO41 (ENSCJPG00005007747)	EGR4 (ENSCJPG00005007745)	ENSCJPG00005007741	ADAM33 (ENSCJPG00005007650)	GFRA4 (ENSCJPG00005007641)	ATRN (ENSCJPG00005007640)	DNAAF9 (ENSCJPG00005007625)	ENSCJPG00005007615	SLC4A11 (ENSCJPG00005007604)	ENSCJPG00005007602 ##22	DDRGK1 (ENSCJPG00005007581)	LZTS3 (ENSCJPG00005007579)	UBOX5 (ENSCJPG00005007575)	ENSCJPG00005007573	ENSCJPG00005007570	MRPS26 (ENSCJPG00005007569)	PTPRA (ENSCJPG00005006905)	ENSCJPG00005006896	PANK2 (ENSCJPG00005006894)	RNF24 (ENSCJPG00005006868)	SMOX (ENSCJPG00005006863)	ADRA1D (ENSCJPG00005006860)	LRRTM1 (ENSCJPG00005006792)	CTNNA2 (ENSCJPG00005006785)	SUCLG1 (ENSCJPG00005006765)
African ostrich	MODERN SPECIES	842	SPR (ENSSCUG00000017738)	SFXN5 (ENSSCUG00000017728)	RAB11FIP5 (ENSSCUG00000017722)	ENSSCUG00000017721	SMYD5 (ENSSCUG00000017720)	PRADC1 (ENSSCUG00000017718)	CCT7 (ENSSCUG00000017714)	FBXO41 (ENSSCUG00000017710)	ENSSCUG00000017706	ENSSCUG00000017703	ADAM33 (ENSSCUG00000017697)	GFRA4 (ENSSCUG00000017696)	ATRN (ENSSCUG00000017656)	DNAAF9 (ENSSCUG00000017600)	SLC4A11 (ENSSCUG00000017591)	ENSSCUG00000017590 ##22	ENSSCUG00000017588	DDRGK1 (ENSSCUG00000017586)	LZTS3 (ENSSCUG00000017583)	FASTKD5 (ENSSCUG00000017582)	UBOX5 (ENSSCUG00000017581)	ENSSCUG00000017580	ENSSCUG00000017579	PTPRA (ENSSCUG00000017565)	ENSSCUG00000017562	ENSSCUG00000017561	ENSSCUG00000017560	ENSSCUG00000017558	SMOX (ENSSCUG00000017554)	ADRA1D (ENSSCUG00000017553)	CTNNA2 (ENSSCUG00000017542)
Australian saltwater crocodile	MODERN SPECIES	65	ENSCPRG00005018756	SFXN5 (ENSCPRG00005018757)	RAB11FIP5 (ENSCPRG00005018760)	ENSCPRG00005018762	SMYD5 (ENSCPRG00005018764)	PRADC1 (ENSCPRG00005018767)	CCT7 (ENSCPRG00005018781)	FBXO41 (ENSCPRG00005018789)	EGR4 (ENSCPRG00005018790)	ENSCPRG00005018791	ADAM33 (ENSCPRG00005018796)	GFRA4 (ENSCPRG00005018797)	ATRN (ENSCPRG00005018799)	DNAAF9 (ENSCPRG00005018802)	SLC4A11 (ENSCPRG00005018809)	ENSCPRG00005018815 ##22	ENSCPRG00005018817	ENSCPRG00005018819	LZTS3 (ENSCPRG00005018824)	FASTKD5 (ENSCPRG00005018825)	UBOX5 (ENSCPRG00005018827)	ENSCPRG00005018830	ENSCPRG00005018831	MRPS26 (ENSCPRG00005018832)	ENSCPRG00005018833	PTPRA (ENSCPRG00005018837)	ENSCPRG00005018838	PANK2 (ENSCPRG00005018839)	RNF24 (ENSCPRG00005018844)	SMOX (ENSCPRG00005018846)	ADRA1D (ENSCPRG00005018848)
Anura	ANCESTRAL SPECIES	296											ENSGT00940000160491	ENSGT00940000157346	ENSGT00390000003692	ENSGT00940000165596	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00730000112302	ENSGT00390000017193
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000014290	ENSLLEG00000014145	ENSLLEG00000014057	ENSLLEG00000014015	ENSLLEG00000013951	ENSLLEG00000013912	ENSLLEG00000013893	ENSLLEG00000027600	GFRA4 (ENSLLEG00000027570)	ENSLLEG00000027547	ATRN (ENSLLEG00000027210)	DNAAF9 (ENSLLEG00000026980)	ENSLLEG00000026896	ENSLLEG00000026871	SLC4A11 (ENSLLEG00000026555)	ENSLLEG00000026501 ##22	ENSLLEG00000026488	ENSLLEG00000026465	DDRGK1 (ENSLLEG00000026398)	ENSLLEG00000026355	ENSLLEG00000026339	ENSLLEG00000026275	ENSLLEG00000026258	ENSLLEG00000026173	SFXN5 (ENSLLEG00000026011)	EMX1 (ENSLLEG00000025953)	ENSLLEG00000025907	ENSLLEG00000025891	EXOC6B (ENSLLEG00000023945) ##8	ENSLLEG00000023814	CYP26B1 (ENSLLEG00000023718) ##7
Frog	MODERN SPECIES		ENSXETG00000042335	ENSXETG00000045274	oxt (ENSXETG00000027327)	avp (ENSXETG00000043236)	fastkd5 (ENSXETG00000046857)	ubox5 (ENSXETG00000027330)	lzts3 (ENSXETG00000017977)	ENSXETG00000043807	pomc (ENSXETG00000004362)	ENSXETG00000044364	atrn (ENSXETG00000004357)	ENSXETG00000047855	dnaaf9 (ENSXETG00000004348)	ENSXETG00000004350	slc4a11 (ENSXETG00000014645)	htr7l (ENSXETG00000048068) ##22	paip2b (ENSXETG00000025676)	ENSXETG00000031104	siglec1 (ENSXETG00000021529)	tex261 (ENSXETG00000021530)	ankrd53 (ENSXETG00000040165)	ENSXETG00000046944	atp6v1b1 (ENSXETG00000021532)	vax2 (ENSXETG00000039952)	nagk (ENSXETG00000021541)	ENSXETG00000045698	exoc6b (ENSXETG00000021542) ##8	ENSXETG00000048433	cyp26b1 (ENSXETG00000046186) ##7	ENSXETG00000048922	DYSF (ENSXETG00000015757)
Actinopterygii	ANCESTRAL SPECIES	349											ENSGT00940000157346	ENSGT00940000160491.d.a	ENSGT00940000160491.d.b	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00510000047420	ENSGT00940000158783	ENSGT01030000234641.a.a.a	ENSGT01030000234641.a.a.b	ENSGT00940000161476
Neopterygii	ANCESTRAL SPECIES	293											ENSGT00940000157346	ENSGT00940000160491.d.a	ENSGT00940000160491.d.b	ENSGT00390000003692	ENSGT00940000154894	ENSGT01010000222287.B.a.a.b ##22	ENSGT00510000047420	ENSGT00940000154361.B	ENSGT00940000158783	ENSGT01030000234641.a.a.a	ENSGT01030000234641.a.a.b	ENSGT00940000161476
Spotted gar	MODERN SPECIES	670	hspa12b (ENSLOCG00000001328)	exoc6b (ENSLOCG00000001267) ##8	cyp26b1 (ENSLOCG00000001249) ##7	ENSLOCG00000017468	ENSLOCG00000001225	dysf (ENSLOCG00000001150)	ENSLOCG00000001128	ENSLOCG00000001115	CDC25B (ENSLOCG00000001061)	ap5s1 (ENSLOCG00000001046)	ENSLOCG00000001021	GFRA4 (ENSLOCG00000000979)	ATRN (ENSLOCG00000000928)	dnaaf9 (ENSLOCG00000000908)	slc4a11 (ENSLOCG00000000878)	ENSLOCG00000000853 ##22	ENSLOCG00000000837
Osteoglossocephalai	ANCESTRAL SPECIES	412															ENSGT00940000160491.d.b	ENSGT01010000222287.B.a.a.b ##22	ENSGT00510000047420	ENSGT00940000154361.B	ENSGT00940000157425.A	ENSGT01030000234641.a.a.a	ENSGT00940000158783.a.b
Osteoglossiformes	ANCESTRAL SPECIES	322						ENSGT00940000166929	ENSGT00940000157217.i.a	ENSGT00940000158121	ENSGT00940000154894.a	ENSGT00940000165596	ENSGT00940000168737	ENSGT00390000003692	ENSGT00940000165600	ENSGT00940000157346	ENSGT00940000160491.c	ENSGT01010000222287.B.a.a.b ##22	ENSGT00510000047420	ENSGT00940000161476.n	ENSGT01030000234641.a.a.a	ENSGT00940000158783.a.b	ENSGT00940000159756
Asian bonytongue	MODERN SPECIES		acat2 (ENSSFOG00015018150)	wtap (ENSSFOG00015032191)	sod2 (ENSSFOG00015018195)	OTOF (ENSSFOG00015018253)	drc1 (ENSSFOG00015018560)	foxi2 (ENSSFOG00015026749)	zfyve28 (ENSSFOG00015027771)	EIF2AK3 (ENSSFOG00015018609)	SLC4A11 (ENSSFOG00015018690)	ENSSFOG00015018852	dnaaf9 (ENSSFOG00015018879)	ATRN (ENSSFOG00015018905)	gfra4a (ENSSFOG00015018969)	cactin (ENSSFOG00015018985)	CDC25B (ENSSFOG00015019012)	ENSSFOG00015019027 ##22	ENSSFOG00015031121	smyd5 (ENSSFOG00015019050)	noto (ENSSFOG00015019115)	sfxn5b (ENSSFOG00015019125)	ENSSFOG00015019157	ENSSFOG00015019165	rnf4 (ENSSFOG00015019175)	fgfrl1a (ENSSFOG00015019205)	ENSSFOG00015019221	ENSSFOG00015019238	spon2b (ENSSFOG00015019258)	zgc:136929 (ENSSFOG00015019269)	maea (ENSSFOG00015019307)	uvssa (ENSSFOG00015019349)	nkx1.2lb (ENSSFOG00015029833)
Reedfish	MODERN SPECIES	13	hspa12b (ENSECRG00000003435)	slc4a11 (ENSECRG00000003848)	ENSECRG00000003857	dnaaf9 (ENSECRG00000003869)	eif1 (ENSECRG00000003890)	ATRN (ENSECRG00000003907)	GFRA4 (ENSECRG00000003948)	ENSECRG00000003952	ENSECRG00000003954	AP5S1 (ENSECRG00000003964)	ENSECRG00000003968	exoc6b (ENSECRG00000003990) ##8	ENSECRG00000004013 ##8	cyp26b1 (ENSECRG00000004019) ##7	dysf (ENSECRG00000004029)	ENSECRG00000004055 ##22	smyd5 (ENSECRG00000004075)	ENSECRG00000004157	noto (ENSECRG00000004162)	emx1 (ENSECRG00000004168)	sfxn5b (ENSECRG00000004187)	ENSECRG00000004223	cct7 (ENSECRG00000004242)	ENSECRG00000004260	ENSECRG00000004271	ENSECRG00000004299	ENSECRG00000004322	ENSECRG00000004346	ENSECRG00000004356	dok1b (ENSECRG00000004363)	ENSECRG00000004376