Mus	ANCESTRAL SPECIES	5	ENSGT00940000157183.a.b #7	ENSGT00940000157673 #8	ENSGT00950000183063.c.b.a.g.b #9	ENSGT00950000183063.c.b.a.g.a.a #10	ENSGT00950000183063.c.b.a.g.a.b #11	ENSGT00530000063106.A #12	ENSGT00390000015492.B #13	ENSGT00940000157155 #14	ENSGT00390000000263 #15	ENSGT00940000155762.bc.a	ENSGT00390000009950 #17	ENSGT01100000263484.A.c.a.a #18	ENSGT00940000157437 #19	ENSGT00940000157606 #20	ENSGT00390000018026 #21	ENSGT01050000244937.a.b.b #22	ENSGT00940000153386.A #23	ENSGT00390000003006 #24	ENSGT00390000003032 #25	ENSGT01040000240444.A.b.a.a #26	ENSGT00950000184137 #27	ENSGT00950000183115.a #28	ENSGT00390000004360.a.b.b #29	ENSGT00940000155124.eb #30	ENSGT00510000050180 #34	ENSGT00990000204294 #35	ENSGT00940000160895	ENSGT00390000001015	ENSGT00940000156517	ENSGT00940000158872	ENSGT00510000048154
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000157183.a.b #7	ENSGT00940000157673 #8	ENSGT00950000183063.c.b.a.g.b #9	ENSGT00950000183063.c.b.a.g.a.a #10	ENSGT00950000183063.c.b.a.g.a.b #11	ENSGT00530000063106.A #12	ENSGT00390000015492.B #13	ENSGT00940000157155 #14	ENSGT00390000000263 #15	ENSGT00940000155762.bc.a	ENSGT00390000009950 #17	ENSGT01100000263484.A.c.a.a #18	ENSGT00940000157437 #19	ENSGT00940000157606 #20	ENSGT00390000018026 #21	ENSGT01050000244937.a.b.b #22	ENSGT00940000153386.A #23	ENSGT00390000003006 #24	ENSGT00390000003032 #25	ENSGT01040000240444.A.b.a.a #26	ENSGT00950000184137 #27	ENSGT00950000183115.a #28	ENSGT00390000004360.a.b.b #29	ENSGT00960000186930	ENSGT00990000204294 #35	ENSGT00940000160895	ENSGT00390000001015	ENSGT00940000156517	ENSGT00940000158872	ENSGT00510000048154	ENSGT00940000153313.A
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000157183.a.b #7	ENSGT00940000157673 #8	ENSGT00950000183063.c.b.a.g.b #9	ENSGT00950000183063.c.b.a.g.a.a #10	ENSGT00950000183063.c.b.a.g.a.b #11	ENSGT00530000063106.A #12	ENSGT00390000015492.B #13	ENSGT00940000157155 #14	ENSGT00390000000263 #15	ENSGT00940000155762.bc.a	ENSGT00390000009950 #17	ENSGT01100000263484.A.c.a.a #18	ENSGT00940000157437.g.a #19	ENSGT00940000157606 #20	ENSGT00390000018026 #21	ENSGT01050000244937.a.b.b #22	ENSGT00940000153386.A #23	ENSGT00390000003006 #24	ENSGT00390000003032 #25	ENSGT01040000240444.A.b.a.a #26	ENSGT00950000184137 #27	ENSGT00950000183115.a #28	ENSGT00390000004360.a.b.b #29	ENSGT00940000155124.eb.f #30	ENSGT00940000162129.d.t #31	ENSGT00960000186930	ENSGT00990000204294 #35	ENSGT00940000160895	ENSGT00390000001015	ENSGT00940000156517	ENSGT00940000158872
Mouse	MODERN SPECIES		Prss56 (ENSMUSG00000036480) #7	Ecel1 (ENSMUSG00000026247) #8	Akp3 (ENSMUSG00000036500) #9	Alpi (ENSMUSG00000079440) #10	Alppl2 (ENSMUSG00000026246) #11	Dis3l2 (ENSMUSG00000053333) #12	Nppc (ENSMUSG00000026241) #13	Cops7b (ENSMUSG00000026240) #14	Pde6d (ENSMUSG00000026239) #15	Ptma (ENSMUSG00000026238) #16	Tex44 (ENSMUSG00000036574) #17	Nmur1 (ENSMUSG00000026237) #18	Ncl (ENSMUSG00000026234) #19	B3gnt7 (ENSMUSG00000079445) #20	Armc9 (ENSMUSG00000062590) #21	Htr2b (ENSMUSG00000026228) #22	Psmd1 (ENSMUSG00000026229) #23	2810459M11Rik (ENSMUSG00000026227) #24	Spata3 (ENSMUSG00000026226) #25	Gpr55 (ENSMUSG00000049608) #26	4933407L21Rik (ENSMUSG00000026224) #27	Itm2c (ENSMUSG00000026223) #28	Cab39 (ENSMUSG00000036707) #29	A630001G21Rik (ENSMUSG00000052760) #30	Sp100 (ENSMUSG00000026222) #31	Sp140 (ENSMUSG00000070031) #32	Sp110 (ENSMUSG00000070034) #33	Gm7592 (ENSMUSG00000118607) #34	Gm52955 (ENSMUSG00000118591) #35	Gm7609 (ENSMUSG00000079457) #36	A530032D15Rik (ENSMUSG00000089844) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000157183.a.b #7	ENSGT00940000157673 #8	ENSGT00950000183063.c.b.a.g.b #9	ENSGT00950000183063.c.b.a.g.a.a #10	ENSGT00950000183063.c.b.a.g.a.b #11	ENSGT00530000063106.A #12	ENSGT00390000015492.B #13	ENSGT00940000157155 #14	ENSGT00390000000263 #15	ENSGT00940000155762.bc.a	ENSGT00390000009950 #17	ENSGT01100000263484.A.c.a.a #18	ENSGT00940000157437.g.a #19	ENSGT00940000157606 #20	ENSGT00390000018026 #21	ENSGT01050000244937.a.b.b #22	ENSGT00940000153386.A #23	ENSGT00390000003006 #24	ENSGT00390000003032 #25	ENSGT01040000240444.A.b.a.a #26	ENSGT00950000184137 #27	ENSGT00950000183115.a #28	ENSGT00390000004360.a.b.b #29	ENSGT00940000155124.eb.f #30	ENSGT00940000162129.d.t #31	ENSGT00940000160895	ENSGT00390000001015	ENSGT00940000156517	ENSGT00940000158872	ENSGT00510000048154	ENSGT00940000153313.A
Steppe mouse	MODERN SPECIES	2813							Nppc (ENSMSIG00000003555) #13	Cops7b (ENSMSIG00000003512) #14	Pde6d (ENSMSIG00000003383) #15	ENSMSIG00000003328	Tex44 (ENSMSIG00000003306) #17	Nmur1 (ENSMSIG00000003284) #18	Ncl (ENSMSIG00000003189) #19	B3gnt7 (ENSMSIG00000003167) #20	Armc9 (ENSMSIG00000003042) #21	Htr2b (ENSMSIG00000003004) #22	Psmd1 (ENSMSIG00000002833) #23	2810459M11Rik (ENSMSIG00000002787) #24	ENSMSIG00000002728 #25	Gpr55 (ENSMSIG00000002712) #26	4933407L21Rik (ENSMSIG00000002667) #27	ENSMSIG00000002620 #28	Cab39 (ENSMSIG00000002506) #29	A630001G21Rik (ENSMSIG00000002450) #30	ENSMSIG00000002325
spretus	MODERN SPECIES		Ecel1 (MGP_SPRETEiJ_G0015175) #8	Akp3 (MGP_SPRETEiJ_G0015174) #9	Alpi (MGP_SPRETEiJ_G0015173) #10	Alppl2 (MGP_SPRETEiJ_G0015172) #11	Dis3l2 (MGP_SPRETEiJ_G0015171) #12	Nppc (MGP_SPRETEiJ_G0015170) #13	Cops7b (MGP_SPRETEiJ_G0015169) #14	Pde6d (MGP_SPRETEiJ_G0015168) #15	Ptma (MGP_SPRETEiJ_G0015167) #16	Tex44 (MGP_SPRETEiJ_G0015166) #17	Nmur1 (MGP_SPRETEiJ_G0015165) #18	Ncl (MGP_SPRETEiJ_G0015164) ##19	B3gnt7 (MGP_SPRETEiJ_G0015163) #20	Armc9 (MGP_SPRETEiJ_G0015162) #21	MGP_SPRETEiJ_G0015161 #23	Htr2b (MGP_SPRETEiJ_G0015160) #22	Psmd1 (MGP_SPRETEiJ_G0015159) #23	2810459M11Rik (MGP_SPRETEiJ_G0015158) #24	MGP_SPRETEiJ_G0015157 #25	Gpr55 (MGP_SPRETEiJ_G0015156) #26	MGP_SPRETEiJ_G0015155 #27	Itm2c (MGP_SPRETEiJ_G0015154) #28	Cab39 (MGP_SPRETEiJ_G0015153) #29	A630001G21Rik (MGP_SPRETEiJ_G0015152) #30	MGP_SPRETEiJ_G0015151 #31	MGP_SPRETEiJ_G0015150	MGP_SPRETEiJ_G0015149 #35	MGP_SPRETEiJ_G0015148	Slc16a14 (MGP_SPRETEiJ_G0015147)	Fbxo36 (MGP_SPRETEiJ_G0015146)	Trip12 (MGP_SPRETEiJ_G0015145)
Ryukyu mouse	MODERN SPECIES		Ecel1 (MGP_CAROLIEiJ_G0014373) #8	Akp3 (MGP_CAROLIEiJ_G0014372) #9	Alpi (MGP_CAROLIEiJ_G0014371) #10	Alppl2 (MGP_CAROLIEiJ_G0014370) #11	Dis3l2 (MGP_CAROLIEiJ_G0014369) #12	Nppc (MGP_CAROLIEiJ_G0014368) #13	Cops7b (MGP_CAROLIEiJ_G0014367) #14	Pde6d (MGP_CAROLIEiJ_G0014366) #15	MGP_CAROLIEiJ_G0014365	Tex44 (MGP_CAROLIEiJ_G0014364) #17	Nmur1 (MGP_CAROLIEiJ_G0014363) #18	Ncl (MGP_CAROLIEiJ_G0014362) #19	B3gnt7 (MGP_CAROLIEiJ_G0014361) #20	Armc9 (MGP_CAROLIEiJ_G0014360) #21	MGP_CAROLIEiJ_G0014359 #23	Htr2b (MGP_CAROLIEiJ_G0014358) #22	Psmd1 (MGP_CAROLIEiJ_G0014357) #23	2810459M11Rik (MGP_CAROLIEiJ_G0014356) #24	MGP_CAROLIEiJ_G0014355 #25	Gpr55 (MGP_CAROLIEiJ_G0014354) #26	MGP_CAROLIEiJ_G0014353	Itm2c (MGP_CAROLIEiJ_G0014352) #28	Cab39 (MGP_CAROLIEiJ_G0014351) #29	A630001G21Rik (MGP_CAROLIEiJ_G0014350) #30	MGP_CAROLIEiJ_G0014349	MGP_CAROLIEiJ_G0014348	MGP_CAROLIEiJ_G0014347 #32	MGP_CAROLIEiJ_G0014346 #32	MGP_CAROLIEiJ_G0014345	MGP_CAROLIEiJ_G0014344	MGP_CAROLIEiJ_G0014342 #35
Shrew mouse	MODERN SPECIES	18	Ecel1 (MGP_PahariEiJ_G0027610) #8	Akp3 (MGP_PahariEiJ_G0027609) #9	MGP_PahariEiJ_G0027608 #10	Alppl2 (MGP_PahariEiJ_G0027607) #11	Dis3l2 (MGP_PahariEiJ_G0027606) #12	Nppc (MGP_PahariEiJ_G0027605) #13	Cops7b (MGP_PahariEiJ_G0027604) #14	Pde6d (MGP_PahariEiJ_G0027603) #15	MGP_PahariEiJ_G0027602 #16	Tex44 (MGP_PahariEiJ_G0027601) #17	Nmur1 (MGP_PahariEiJ_G0027600) #18	Ncl (MGP_PahariEiJ_G0027599) #19	B3gnt7 (MGP_PahariEiJ_G0027598) #20	Armc9 (MGP_PahariEiJ_G0027597) #21	MGP_PahariEiJ_G0027596 #23	Htr2b (MGP_PahariEiJ_G0027595) #22	Psmd1 (MGP_PahariEiJ_G0027594) #23	2810459M11Rik (MGP_PahariEiJ_G0027593) #24	MGP_PahariEiJ_G0027592 #25	Gpr55 (MGP_PahariEiJ_G0027591) #26	MGP_PahariEiJ_G0027590 #27	Itm2c (MGP_PahariEiJ_G0027589) #28	Cab39 (MGP_PahariEiJ_G0027588) #29	MGP_PahariEiJ_G0027587 #30	Sp100 (MGP_PahariEiJ_G0027586) #31	MGP_PahariEiJ_G0027585	MGP_PahariEiJ_G0027584	MGP_PahariEiJ_G0027583 #32	MGP_PahariEiJ_G0027582 ##30	MGP_PahariEiJ_G0027580 #30	MGP_PahariEiJ_G0027579 #35