Glires	ANCESTRAL SPECIES	25	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000156051 #12	ENSGT00940000162419 #11	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Kangaroo rat	MODERN SPECIES	383	Tnfsf14 (ENSDORG00000028843) #7	Tubb4a (ENSDORG00000030020) #8	ENSDORG00000029765 #9	Crb3 (ENSDORG00000002452) #10	Slc25a41 (ENSDORG00000002448) #11	Khsrp (ENSDORG00000002447) #12	Gm17949 (ENSDORG00000002446) #13	Gtf2f1 (ENSDORG00000002445) #14	Pspn (ENSDORG00000002443) #15	Alkbh7 (ENSDORG00000002441) #16	Clpp (ENSDORG00000002435) #17	Acer1 (ENSDORG00000013614) #18	Mllt1 (ENSDORG00000006056) #19	Acsbg3 (ENSDORG00000026047) #20	Acsbg2 (ENSDORG00000024853) #21	Rfx2 (ENSDORG00000008083) #22	Ranbp3 (ENSDORG00000003144) #23	ENSDORG00000003143 #24	Vmac (ENSDORG00000029939) #25	Ndufa11 (ENSDORG00000003140) #26	Dus3l (ENSDORG00000006754) #27	Lonp1 (ENSDORG00000016207) #28	Rpl36 (ENSDORG00000025864) #29	ENSDORG00000016206 #30	Micos13 (ENSDORG00000016204) #31	Safb (ENSDORG00000016200) #32	Safb2 (ENSDORG00000016199) #33	Ptprs (ENSDORG00000006297) #34	Kdm4b (ENSDORG00000008375) #35	Uhrf1 (ENSDORG00000013642) #36	Arrdc5 (ENSDORG00000013640) #37
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Muroidea	ANCESTRAL SPECIES	32	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Chinese hamster chok1gshd	MODERN SPECIES	2	Tubb4a (ENSCGRG00001001011) #8	Dennd1c (ENSCGRG00001020022) #9	Crb3 (ENSCGRG00001021736) #10	Slc25a23 (ENSCGRG00001023449)	Slc25a41 (ENSCGRG00001000917) #11	Khsrp (ENSCGRG00001011031) #12	Gm17949 (ENSCGRG00001006952) #13	Gtf2f1 (ENSCGRG00001006209) #14	Pspn (ENSCGRG00001017826) #15	Alkbh7 (ENSCGRG00001019380) #16	Clpp (ENSCGRG00001019808) #17	Acer1 (ENSCGRG00001016857) #18	Mllt1 (ENSCGRG00001018607) #19	Acsbg3 (ENSCGRG00001021403) #20	Acsbg2 (ENSCGRG00001001208) #21	Rfx2 (ENSCGRG00001008783) #22	Prr22 (ENSCGRG00001022202)	Dus3l (ENSCGRG00001023361) #27	Nrtn (ENSCGRG00001024492) ##15	ENSCGRG00001008918	Ndufa11 (ENSCGRG00001023471) #26	Vmac (ENSCGRG00001023793) #25	ENSCGRG00001021756 #24	Ranbp3 (ENSCGRG00001022677) #23	Catsperd (ENSCGRG00001010087)	Lonp1 (ENSCGRG00001021835) #28	ENSCGRG00001020793 ##29	Safb (ENSCGRG00001002254) #32	Micos13 (ENSCGRG00001016715) #31	Safb2 (ENSCGRG00001015833) #33	Tincr (ENSCGRG00001024474)
Golden Hamster	MODERN SPECIES	730	Tubb4a (ENSMAUG00000017901) #8	Dennd1c (ENSMAUG00000006409) #9	Crb3 (ENSMAUG00000019988) #10	ENSMAUG00000000871	Slc25a41 (ENSMAUG00000014724) #11	Khsrp (ENSMAUG00000018966) #12	Gm17949 (ENSMAUG00000018260) #13	ENSMAUG00000015346 #14	Pspn (ENSMAUG00000019121) #15	Alkbh7 (ENSMAUG00000000800) #16	Clpp (ENSMAUG00000021469) #17	Acer1 (ENSMAUG00000012781) #18	Mllt1 (ENSMAUG00000011374) #19	Acsbg3 (ENSMAUG00000014035) #20	Acsbg2 (ENSMAUG00000017399) #21	Rfx2 (ENSMAUG00000018587) #22	Prr22 (ENSMAUG00000003201)	Dus3l (ENSMAUG00000008347) #27	Nrtn (ENSMAUG00000001043) ##15	Ndufa11 (ENSMAUG00000021572) #26	Vmac (ENSMAUG00000009455) #25	ENSMAUG00000013827 #24	Ranbp3 (ENSMAUG00000011228) #23	Catsperd (ENSMAUG00000009178)	Lonp1 (ENSMAUG00000013293) #28	ENSMAUG00000018691 ##29	Safb2 (ENSMAUG00000011573) #33	Tincr (ENSMAUG00000006706)	Znrf4 (ENSMAUG00000008614)	Ptprs (ENSMAUG00000003364) #34	Kdm4b (ENSMAUG00000022140) #35
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00940000163125	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Northern American deer mouse	MODERN SPECIES	14	Tubb4a (ENSPEMG00000028633) #8	Dennd1c (ENSPEMG00000023860) #9	Crb3 (ENSPEMG00000021919) #10	Slc25a23 (ENSPEMG00000021021)	Slc25a41 (ENSPEMG00000020675) #11	Khsrp (ENSPEMG00000022853) #12	Gm17949 (ENSPEMG00000026776) #13	Gtf2f1 (ENSPEMG00000011236) #14	Pspn (ENSPEMG00000008246) #15	Alkbh7 (ENSPEMG00000016536) #16	Clpp (ENSPEMG00000009546) #17	Acer1 (ENSPEMG00000021242) #18	Mllt1 (ENSPEMG00000020708) #19	Acsbg3 (ENSPEMG00000022840) #20	Acsbg2 (ENSPEMG00000014725) #21	Rfx2 (ENSPEMG00000021291) #22	Prr22 (ENSPEMG00000014824)	Dus3l (ENSPEMG00000020784) #27	Nrtn (ENSPEMG00000014960) ##15	ENSPEMG00000031186	Ndufa11 (ENSPEMG00000020648) #26	ENSPEMG00000026816	ENSPEMG00000020906 #24	Ranbp3 (ENSPEMG00000020448) #23	Lonp1 (ENSPEMG00000020753) #28	ENSPEMG00000014036 ##29	Micos13 (ENSPEMG00000009993) #31	Safb (ENSPEMG00000020428) #32	Safb2 (ENSPEMG00000016015) #33	Tincr (ENSPEMG00000023023)	Znrf4 (ENSPEMG00000006665)
Prairie vole	MODERN SPECIES	181	Tubb4a (ENSMOCG00000015551) #8	ENSMOCG00000001187 #9	Crb3 (ENSMOCG00000000421) #10	Slc25a23 (ENSMOCG00000014701)	Slc25a41 (ENSMOCG00000013299) #11	Khsrp (ENSMOCG00000018305) #12	Gm17949 (ENSMOCG00000016801) #13	Gtf2f1 (ENSMOCG00000000296) #14	Pspn (ENSMOCG00000014015) #15	Alkbh7 (ENSMOCG00000004923) #16	Clpp (ENSMOCG00000015784) #17	Acer1 (ENSMOCG00000002295) #18	Mllt1 (ENSMOCG00000020318) #19	Acsbg3 (ENSMOCG00000008516) #20	Acsbg2 (ENSMOCG00000000050) #21	Rfx2 (ENSMOCG00000012338) #22	Prr22 (ENSMOCG00000007432)	Dus3l (ENSMOCG00000021796) #27	Nrtn (ENSMOCG00000015675) ##15	ENSMOCG00000006283	ENSMOCG00000001594 #26	Vmac (ENSMOCG00000001137) #25	Ranbp3 (ENSMOCG00000000298) #23	Catsperd (ENSMOCG00000000634)	Lonp1 (ENSMOCG00000007391) #28	ENSMOCG00000013679 ##29	Micos13 (ENSMOCG00000005993) #31	Safb (ENSMOCG00000014040) #32	Safb2 (ENSMOCG00000006827) #33	Tincr (ENSMOCG00000016977)	Ptprs (ENSMOCG00000015299) #34
Murinae	ANCESTRAL SPECIES	38	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000162442 #24	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061
Mus	ANCESTRAL SPECIES	16	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00390000012434 #26	ENSGT00390000007212 #25	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #34
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00390000012434.k #26	ENSGT00390000007212 #25	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #34
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00390000012434.k #26	ENSGT00390000007212 #25	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #34
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00390000016128	ENSGT00550000075134 #27	ENSGT00950000182993.A.a ##15	ENSGT00390000012434.k #26	ENSGT00390000007212 #25	ENSGT00940000158588 #23	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #34	ENSGT00940000159248 #35
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0022717	Tubb4a (MGP_SPRETEiJ_G0022716) #8	MGP_SPRETEiJ_G0022715 #9	Crb3 (MGP_SPRETEiJ_G0022714) #10	Slc25a23 (MGP_SPRETEiJ_G0022713)	Slc25a41 (MGP_SPRETEiJ_G0022712) #11	Khsrp (MGP_SPRETEiJ_G0022711) #12	Gtf2f1 (MGP_SPRETEiJ_G0022710) #14	Pspn (MGP_SPRETEiJ_G0022709) #15	Alkbh7 (MGP_SPRETEiJ_G0022708) #16	Clpp (MGP_SPRETEiJ_G0022707) #17	Acer1 (MGP_SPRETEiJ_G0022706) #18	Mllt1 (MGP_SPRETEiJ_G0022705) #19	Acsbg3 (MGP_SPRETEiJ_G0022704) #20	Acsbg2 (MGP_SPRETEiJ_G0022703) #21	Rfx2 (MGP_SPRETEiJ_G0022702) #22	Prr22 (MGP_SPRETEiJ_G0022701)	Dus3l (MGP_SPRETEiJ_G0022700) #27	Nrtn (MGP_SPRETEiJ_G0022699) ##15	Ndufa11 (MGP_SPRETEiJ_G0022698) #26	Vmac (MGP_SPRETEiJ_G0022697) #25	Ranbp3 (MGP_SPRETEiJ_G0022696) #23	Catsperd (MGP_SPRETEiJ_G0022695)	Lonp1 (MGP_SPRETEiJ_G0022694) #28	MGP_SPRETEiJ_G0022693 ##29	Micos13 (MGP_SPRETEiJ_G0022692) #31	MGP_SPRETEiJ_G0022691	Safb2 (MGP_SPRETEiJ_G0022690) #33	Znrf4 (MGP_SPRETEiJ_G0022689)	Ptprs (MGP_SPRETEiJ_G0022688) #34	Kdm4b (MGP_SPRETEiJ_G0022687) #35
Steppe mouse	MODERN SPECIES	2657	Tubb4a (ENSMSIG00000021731) #8	Dennd1c (ENSMSIG00000021743) #9	Crb3 (ENSMSIG00000021794) #10	Slc25a23 (ENSMSIG00000021822)	Slc25a41 (ENSMSIG00000021849) #11	Khsrp (ENSMSIG00000021874) #12	Gm17949 (ENSMSIG00000021931) #13	Gtf2f1 (ENSMSIG00000021940) #14	Pspn (ENSMSIG00000021975) #15	Alkbh7 (ENSMSIG00000021986) #16	Clpp (ENSMSIG00000022008) #17	Acer1 (ENSMSIG00000022023) #18	Mllt1 (ENSMSIG00000022050) #19	Acsbg3 (ENSMSIG00000022123) #20	Acsbg2 (ENSMSIG00000022144) #21	Rfx2 (ENSMSIG00000022188) #22	Prr22 (ENSMSIG00000022272)	Dus3l (ENSMSIG00000022291) #27	Nrtn (ENSMSIG00000022315) ##15	ENSMSIG00000022323 #26	Vmac (ENSMSIG00000022334) #25	Ranbp3 (ENSMSIG00000022350) #23	Catsperd (ENSMSIG00000022478)	Lonp1 (ENSMSIG00000022544) #28	ENSMSIG00000022557 ##29	ENSMSIG00000022566 #31
Mouse	MODERN SPECIES	8	Tubb4a (ENSMUSG00000062591) #8	Dennd1c (ENSMUSG00000002668) #9	Crb3 (ENSMUSG00000044279) #10	Slc25a23 (ENSMUSG00000046329)	Slc25a41 (ENSMUSG00000011486) #11	Khsrp (ENSMUSG00000007670) #12	Gm17949 (ENSMUSG00000109739) #13	Gtf2f1 (ENSMUSG00000002658) #14	Pspn (ENSMUSG00000002664) #15	Alkbh7 (ENSMUSG00000002661) #16	Clpp (ENSMUSG00000002660) #17	Acer1 (ENSMUSG00000045019) #18	Mllt1 (ENSMUSG00000024212) #19	Acsbg3 (ENSMUSG00000024209) #20	Acsbg2 (ENSMUSG00000024207) #21	Rfx2 (ENSMUSG00000024206) #22	Prr22 (ENSMUSG00000090273)	Dus3l (ENSMUSG00000007603) #27	Nrtn (ENSMUSG00000039481) ##15	Ndufa11 (ENSMUSG00000002379) #26	Vmac (ENSMUSG00000054723) #25	Ranbp3 (ENSMUSG00000002372) #23	Catsperd (ENSMUSG00000040828)	Lonp1 (ENSMUSG00000041168) #28	Rpl36 (ENSMUSG00000057863) #29	Micos13 (ENSMUSG00000049760) #31	Safb (ENSMUSG00000071054) #32	Safb2 (ENSMUSG00000042625) #33	Tincr (ENSMUSG00000110218)	Znrf4 (ENSMUSG00000044526)	Ptprs (ENSMUSG00000013236) #34
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021806	Tubb4a (MGP_CAROLIEiJ_G0021805) #8	Dennd1c (MGP_CAROLIEiJ_G0021804) #9	Crb3 (MGP_CAROLIEiJ_G0021803) #10	Slc25a23 (MGP_CAROLIEiJ_G0021802)	Slc25a41 (MGP_CAROLIEiJ_G0021801) #11	Khsrp (MGP_CAROLIEiJ_G0021800) #12	Gtf2f1 (MGP_CAROLIEiJ_G0021799) #14	Pspn (MGP_CAROLIEiJ_G0021798) #15	Alkbh7 (MGP_CAROLIEiJ_G0021797) #16	Clpp (MGP_CAROLIEiJ_G0021796) #17	Acer1 (MGP_CAROLIEiJ_G0021795) #18	Mllt1 (MGP_CAROLIEiJ_G0021794) #19	Acsbg3 (MGP_CAROLIEiJ_G0021793) #20	Acsbg2 (MGP_CAROLIEiJ_G0021792) #21	Rfx2 (MGP_CAROLIEiJ_G0021791) #22	Prr22 (MGP_CAROLIEiJ_G0021790)	Dus3l (MGP_CAROLIEiJ_G0021789) #27	Nrtn (MGP_CAROLIEiJ_G0021788) ##15	Ndufa11 (MGP_CAROLIEiJ_G0021787) #26	Vmac (MGP_CAROLIEiJ_G0021786) #25	Ranbp3 (MGP_CAROLIEiJ_G0021785) #23	Catsperd (MGP_CAROLIEiJ_G0021784)	Lonp1 (MGP_CAROLIEiJ_G0021783) #28	MGP_CAROLIEiJ_G0021782 ##29	Micos13 (MGP_CAROLIEiJ_G0021781) #31	Safb (MGP_CAROLIEiJ_G0021780) #32	Safb2 (MGP_CAROLIEiJ_G0021779) #33	Znrf4 (MGP_CAROLIEiJ_G0021778)	Ptprs (MGP_CAROLIEiJ_G0021777) #34	Kdm4b (MGP_CAROLIEiJ_G0021776) #35
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020795	Tubb4a (MGP_PahariEiJ_G0020794) #8	Dennd1c (MGP_PahariEiJ_G0020793) #9	Crb3 (MGP_PahariEiJ_G0020792) #10	Slc25a23 (MGP_PahariEiJ_G0020791)	Slc25a41 (MGP_PahariEiJ_G0020790) #11	Khsrp (MGP_PahariEiJ_G0020789) #12	Gtf2f1 (MGP_PahariEiJ_G0020788) #14	Pspn (MGP_PahariEiJ_G0020787) #15	Alkbh7 (MGP_PahariEiJ_G0020786) #16	Clpp (MGP_PahariEiJ_G0020785) #17	Acer1 (MGP_PahariEiJ_G0020784) #18	Mllt1 (MGP_PahariEiJ_G0020783) #19	Acsbg3 (MGP_PahariEiJ_G0020782) #20	Acsbg2 (MGP_PahariEiJ_G0020781) #21	Rfx2 (MGP_PahariEiJ_G0020780) #22	Prr22 (MGP_PahariEiJ_G0020779)	Dus3l (MGP_PahariEiJ_G0020778) #27	Nrtn (MGP_PahariEiJ_G0020777) ##15	Ndufa11 (MGP_PahariEiJ_G0020776) #26	Vmac (MGP_PahariEiJ_G0020775) #25	Ranbp3 (MGP_PahariEiJ_G0020774) #23	Catsperd (MGP_PahariEiJ_G0020773)	Lonp1 (MGP_PahariEiJ_G0020772) #28	MGP_PahariEiJ_G0020771 ##29	Micos13 (MGP_PahariEiJ_G0020770) #31	Safb (MGP_PahariEiJ_G0020769) #32	Safb2 (MGP_PahariEiJ_G0020768) #33	Znrf4 (MGP_PahariEiJ_G0020767)	Ptprs (MGP_PahariEiJ_G0020766) #34	Kdm4b (MGP_PahariEiJ_G0020765) #35
Rat	MODERN SPECIES	19	Tubb4a (ENSRNOG00000047505) #8	Dennd1c (ENSRNOG00000046050) #9	Crb3 (ENSRNOG00000070099) #10	Slc25a23 (ENSRNOG00000047781)	Slc25a41 (ENSRNOG00000048853) #11	Khsrp (ENSRNOG00000047628) #12	Gm17949 (ENSRNOG00000064877) #13	Gtf2f1 (ENSRNOG00000047134) #14	Pspn (ENSRNOG00000071190) #15	Alkbh7 (ENSRNOG00000047089) #16	Clpp (ENSRNOG00000047052) #17	Acer1 (ENSRNOG00000047368) #18	Mllt1 (ENSRNOG00000048736) #19	Acsbg3 (ENSRNOG00000047549) #20	Acsbg2 (ENSRNOG00000045947) #21	Rfx2 (ENSRNOG00000045846) #22	Prr22 (ENSRNOG00000047295)	Dus3l (ENSRNOG00000050381) #27	Nrtn (ENSRNOG00000048651) ##15	Ndufa11 (ENSRNOG00000048320) #26	Vmac (ENSRNOG00000065863) #25	Caps (ENSRNOG00000063246) #24	Ranbp3 (ENSRNOG00000049785) #23	Catsperd (ENSRNOG00000048818)	Lonp1 (ENSRNOG00000046502) #28	Micos13 (ENSRNOG00000046002) #31	Safb (ENSRNOG00000050543) #32	Safb2 (ENSRNOG00000049511) #33	Znrf4 (ENSRNOG00000048875)	Ptprs (ENSRNOG00000047247) #34	Kdm4b (ENSRNOG00000049221) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Tnfsf14 (ENSNGAG00000023106) #7	Cd70 (ENSNGAG00000013982)	Tubb4a (ENSNGAG00000019498) #8	Dennd1c (ENSNGAG00000015322) #9	Crb3 (ENSNGAG00000023048) #10	Slc25a23 (ENSNGAG00000023065)	Slc25a41 (ENSNGAG00000019185) #11	Khsrp (ENSNGAG00000023093) #12	Gm17949 (ENSNGAG00000023078) #13	Gtf2f1 (ENSNGAG00000023277) #14	Pspn (ENSNGAG00000022337) #15	Alkbh7 (ENSNGAG00000018037) #16	Clpp (ENSNGAG00000020943) #17	Acer1 (ENSNGAG00000021750) #18	Mllt1 (ENSNGAG00000015361) #19	Rfx2 (ENSNGAG00000018829) #22	Prr22 (ENSNGAG00000023052)	Dus3l (ENSNGAG00000017157) #27	Nrtn (ENSNGAG00000021333) ##15	Ndufa11 (ENSNGAG00000017779) #26	Vmac (ENSNGAG00000016642) #25	Ranbp3 (ENSNGAG00000015130) #23	Catsperd (ENSNGAG00000021716)	Lonp1 (ENSNGAG00000018118) #28	ENSNGAG00000021002 ##29	ENSNGAG00000022750 #30	ENSNGAG00000021672 #31	Safb (ENSNGAG00000019882) #32	ENSNGAG00000018473 #33	Tincr (ENSNGAG00000021324)	Ptprs (ENSNGAG00000019407) #34
Lesser Egyptian jerboa	MODERN SPECIES	55	Tubb4a (ENSJJAG00000001103) #8	ENSJJAG00000023239 #9	Crb3 (ENSJJAG00000017361) #10	Slc25a23 (ENSJJAG00000018390)	Slc25a41 (ENSJJAG00000009731) #11	Khsrp (ENSJJAG00000006370) #12	Gm17949 (ENSJJAG00000017204) #13	Gtf2f1 (ENSJJAG00000016614) #14	Pspn (ENSJJAG00000023140) #15	Alkbh7 (ENSJJAG00000023908) #16	ENSJJAG00000019233 #17	Acer1 (ENSJJAG00000018285) #18	Mllt1 (ENSJJAG00000017227) #19	Acsbg3 (ENSJJAG00000021099) #20	Acsbg2 (ENSJJAG00000022623) #21	Rfx2 (ENSJJAG00000009362) #22	Prr22 (ENSJJAG00000020858)	Dus3l (ENSJJAG00000023742) #27	Nrtn (ENSJJAG00000016578) ##15	Ndufa11 (ENSJJAG00000023264) #26	Vmac (ENSJJAG00000021312) #25	ENSJJAG00000017779 #24	Ranbp3 (ENSJJAG00000007163) #23	Lonp1 (ENSJJAG00000021237) #28	ENSJJAG00000020144 #29	ENSJJAG00000023960 #31	Safb (ENSJJAG00000009021) #32	ENSJJAG00000015942 #33	Tincr (ENSJJAG00000015733)	Znrf4 (ENSJJAG00000015898)	Ptprs (ENSJJAG00000022069) #34
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800.b #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800.b #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800.b #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #34
Long-tailed chinchilla	MODERN SPECIES	202	TUBB4A (ENSCLAG00000008831) #8	DENND1C (ENSCLAG00000012303) #9	ENSCLAG00000014016 #10	SLC25A23 (ENSCLAG00000015826)	SLC25A41 (ENSCLAG00000006414) #11	KHSRP (ENSCLAG00000007309) #12	ENSCLAG00000007910 #13	GTF2F1 (ENSCLAG00000008779) #14	PSPN (ENSCLAG00000016653) #15	ALKBH7 (ENSCLAG00000017244) #16	CLPP (ENSCLAG00000009974) #17	ACER1 (ENSCLAG00000011663) #18	MLLT1 (ENSCLAG00000011833) #19	ENSCLAG00000006362 #20	ACSBG2 (ENSCLAG00000007301) #21	RFX2 (ENSCLAG00000008242) #22	RANBP3 (ENSCLAG00000011775) #23	CAPS (ENSCLAG00000013758) #24	VMAC (ENSCLAG00000012168) #25	NDUFA11 (ENSCLAG00000008043) #26	DUS3L (ENSCLAG00000008470) #27	PRR22 (ENSCLAG00000009039)	LONP1 (ENSCLAG00000007239) #28	RPL36 (ENSCLAG00000012455) ##29	MICOS13 (ENSCLAG00000009496) #31	SAFB (ENSCLAG00000007734) #32	ENSCLAG00000009742 #33	ENSCLAG00000007870	ENSCLAG00000008007	PTPRS (ENSCLAG00000006868) #34	KDM4B (ENSCLAG00000007020) #35
Degu	MODERN SPECIES	91	TUBB4A (ENSODEG00000015772) #8	ENSODEG00000015746 #9	CRB3 (ENSODEG00000015295) #10	SLC25A23 (ENSODEG00000014916)	SLC25A41 (ENSODEG00000015990) #11	KHSRP (ENSODEG00000015021) #12	ENSODEG00000015969 #13	GTF2F1 (ENSODEG00000014900) #14	PSPN (ENSODEG00000014761) #15	ALKBH7 (ENSODEG00000015141) #16	CLPP (ENSODEG00000015485) #17	ACER1 (ENSODEG00000015726) #18	MLLT1 (ENSODEG00000014883) #19	ENSODEG00000015920 #20	ENSODEG00000015714 #21	RFX2 (ENSODEG00000015368) #22	RANBP3 (ENSODEG00000015257) #23	CAPS (ENSODEG00000016529) #24	VMAC (ENSODEG00000014819) #25	NDUFA11 (ENSODEG00000015123) #26	NRTN (ENSODEG00000014997) ##15	DUS3L (ENSODEG00000015771) #27	PRR22 (ENSODEG00000015287)	LONP1 (ENSODEG00000015069) #28	ENSODEG00000017182 ##29	MICOS13 (ENSODEG00000016327) #31	SAFB (ENSODEG00000014838) #32	SAFB2 (ENSODEG00000014751) #33	ENSODEG00000015112	PTPRS (ENSODEG00000015678) #34	KDM4B (ENSODEG00000014383) #35
Guinea pig	MODERN SPECIES	229	ENSCPOG00000022803	TUBB4A (ENSCPOG00000003237) #8	DENND1C (ENSCPOG00000003232) #9	CRB3 (ENSCPOG00000024888) #10	SLC25A23 (ENSCPOG00000011096)	SLC25A41 (ENSCPOG00000029988) #11	KHSRP (ENSCPOG00000005140) #12	GTF2F1 (ENSCPOG00000012632) #14	PSPN (ENSCPOG00000038963) #15	ALKBH7 (ENSCPOG00000013958) #16	CLPP (ENSCPOG00000013954) #17	ACER1 (ENSCPOG00000021961) #18	MLLT1 (ENSCPOG00000001260) #19	ENSCPOG00000025754 #20	ENSCPOG00000014317 #21	RFX2 (ENSCPOG00000024260) #22	RANBP3 (ENSCPOG00000021646) #23	CAPS (ENSCPOG00000026058) #24	VMAC (ENSCPOG00000014675) #25	NDUFA11 (ENSCPOG00000019390) #26	ENSCPOG00000037079	ENSCPOG00000037083	NRTN (ENSCPOG00000037952) ##15	DUS3L (ENSCPOG00000021236) #27	PRR22 (ENSCPOG00000031470)
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000008762	ENSHGLG00000041462	CD70 (ENSHGLG00000013155)	ENSHGLG00000021141	TNFSF14 (ENSHGLG00000041682) #7	GPR108 (ENSHGLG00000010354)	TRIP10 (ENSHGLG00000006018)	SH2D3A (ENSHGLG00000030969)	ENSHGLG00000007716	ENSHGLG00000011025 #18	MLLT1 (ENSHGLG00000011819) #19	ENSHGLG00000044003	ENSHGLG00000049237 #21	ENSHGLG00000014805	ENSHGLG00000044408	RFX2 (ENSHGLG00000015258) #22	RANBP3 (ENSHGLG00000015535) #23	CAPS (ENSHGLG00000033681) #24	ENSHGLG00000032314 #25	ENSHGLG00000014115 #26	ENSHGLG00000044894	ENSHGLG00000014195	ENSHGLG00000037047	ENSHGLG00000046495	NRTN (ENSHGLG00000014364) ##15	DUS3L (ENSHGLG00000013475) #27	PRR22 (ENSHGLG00000043073)	CATSPERD (ENSHGLG00000032633)	LONP1 (ENSHGLG00000013886) #28	ENSHGLG00000013869 ##29	MICOS13 (ENSHGLG00000032110) #31
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Marmotini	ANCESTRAL SPECIES	24	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a.e #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00940000161972 #8	ENSGT00940000161573 #9	ENSGT00950000183101.a.b.a.e #10	ENSGT00940000159428	ENSGT00940000162419 #11	ENSGT00940000156051 #12	ENSGT00940000163693 #13	ENSGT00440000038032 #14	ENSGT00950000182993.B.b #15	ENSGT00390000014585 #16	ENSGT00390000005830 #17	ENSGT00730000110920.b.a.a #18	ENSGT00940000158800 #19	ENSGT00940000164043 #20	ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22	ENSGT00940000158588 #23	ENSGT00940000162442 #24	ENSGT00390000007212 #25	ENSGT00390000012434 #26	ENSGT00940000163125	ENSGT00950000182993.A.a ##15	ENSGT00550000075134 #27	ENSGT00390000016128	ENSGT00530000063553.b.a #28	ENSGT00390000011943.a.a.a.b ##29	ENSGT00940000162487 #30	ENSGT00390000002629 #31	ENSGT00940000155916 #32	ENSGT00940000161482 #33	ENSGT01010000222837
Squirrel	MODERN SPECIES	188	ENSSTOG00000002404 #9	CRB3 (ENSSTOG00000029565) #10	SLC25A23 (ENSSTOG00000002387)	SLC25A41 (ENSSTOG00000023022) #11	KHSRP (ENSSTOG00000002371) #12	ENSSTOG00000032166 #13	GTF2F1 (ENSSTOG00000025689) #14	PSPN (ENSSTOG00000023397) #15	ALKBH7 (ENSSTOG00000002368) #16	CLPP (ENSSTOG00000028013) #17	ACER1 (ENSSTOG00000002348) #18	ENSSTOG00000022476	MLLT1 (ENSSTOG00000002340) #19	ENSSTOG00000019704 #20	ENSSTOG00000007511 #21	RFX2 (ENSSTOG00000027723) #22	ENSSTOG00000034262 #23	RANBP3 (ENSSTOG00000006462) #23	CAPS (ENSSTOG00000006493) #24	VMAC (ENSSTOG00000012822) #25	NDUFA11 (ENSSTOG00000028356) #26	ENSSTOG00000022255	NRTN (ENSSTOG00000009542) ##15	DUS3L (ENSSTOG00000025017) #27	PRR22 (ENSSTOG00000025571)	LONP1 (ENSSTOG00000019884) #28	ENSSTOG00000020518 ##29	HSD11B1L (ENSSTOG00000027416) #30	MICOS13 (ENSSTOG00000002814) #31	SAFB (ENSSTOG00000002783) #32	ENSSTOG00000002758 #33
Arctic ground squirrel	MODERN SPECIES	301	TUBB4A (ENSUPAG00010023665) #8	DENND1C (ENSUPAG00010023662) #9	ENSUPAG00010023661 #10	SLC25A23 (ENSUPAG00010023660)	SLC25A41 (ENSUPAG00010023658) #11	KHSRP (ENSUPAG00010023657) #12	ENSUPAG00010023656 #13	GTF2F1 (ENSUPAG00010023655) #14	PSPN (ENSUPAG00010023654) #15	ALKBH7 (ENSUPAG00010023653) #16	CLPP (ENSUPAG00010023652) #17	ACER1 (ENSUPAG00010023651) #18	MLLT1 (ENSUPAG00010023650) #19	ENSUPAG00010023649 #20	ACSBG2 (ENSUPAG00010023648) #21	RFX2 (ENSUPAG00010023647) #22	RANBP3 (ENSUPAG00010023645) #23	CAPS (ENSUPAG00010023646) #24	VMAC (ENSUPAG00010023644) #25	ENSUPAG00010023643 #26	ENSUPAG00010023642	NRTN (ENSUPAG00010023641) ##15	DUS3L (ENSUPAG00010023640) #27	PRR22 (ENSUPAG00010023639)	LONP1 (ENSUPAG00010023636) #28	RPL36 (ENSUPAG00010023635) ##29	HSD11B1L (ENSUPAG00010023634) #30	MICOS13 (ENSUPAG00010023633) #31	SAFB (ENSUPAG00010023630) #32	SAFB2 (ENSUPAG00010023625) #33	ENSUPAG00010023624
Alpin marmot	MODERN SPECIES	88	TNFSF9 (ENSMMMG00000019570)	TUBB4A (ENSMMMG00000019550) #8	DENND1C (ENSMMMG00000019533) #9	ENSMMMG00000019517 #10	SLC25A23 (ENSMMMG00000019504)	SLC25A41 (ENSMMMG00000019493) #11	KHSRP (ENSMMMG00000019257) #12	ENSMMMG00000019249 #13	PSPN (ENSMMMG00000019228) #15	ALKBH7 (ENSMMMG00000019225) #16	CLPP (ENSMMMG00000019216) #17	ACER1 (ENSMMMG00000019214) #18	MLLT1 (ENSMMMG00000019206) #19	ENSMMMG00000019196 #20	ACSBG2 (ENSMMMG00000019139) #21	RFX2 (ENSMMMG00000019107) #22	ENSMMMG00000019101 #23	RANBP3 (ENSMMMG00000019085) #23	CAPS (ENSMMMG00000019062) #24	VMAC (ENSMMMG00000019061) #25	NDUFA11 (ENSMMMG00000019059) #26	NRTN (ENSMMMG00000019052) ##15	DUS3L (ENSMMMG00000019016) #27	LONP1 (ENSMMMG00000018859) #28	HSD11B1L (ENSMMMG00000018842) #30	MICOS13 (ENSMMMG00000018836) #31	SAFB (ENSMMMG00000018807) #32	SAFB2 (ENSMMMG00000018701) #33	ENSMMMG00000018676 #34	ENSMMMG00000018660 #34	KDM4B (ENSMMMG00000018611) #35
Eurasian red squirrel	MODERN SPECIES	7	TUBB4A (ENSSVLG00005023819) #8	DENND1C (ENSSVLG00005023643) #9	CRB3 (ENSSVLG00005023581) #10	SLC25A23 (ENSSVLG00005023541)	SLC25A41 (ENSSVLG00005023479) #11	KHSRP (ENSSVLG00005023444) #12	ENSSVLG00005023383 #13	GTF2F1 (ENSSVLG00005023301) #14	PSPN (ENSSVLG00005023279) #15	ALKBH7 (ENSSVLG00005023240) #16	CLPP (ENSSVLG00005023216) #17	ACER1 (ENSSVLG00005023163) #18	MLLT1 (ENSSVLG00005023111) #19	ENSSVLG00005022830 #20	ACSBG2 (ENSSVLG00005022613) #21	RFX2 (ENSSVLG00005022368) #22	RANBP3 (ENSSVLG00005022208) #23	CAPS (ENSSVLG00005022099) #24	VMAC (ENSSVLG00005022064) #25	NDUFA11 (ENSSVLG00005022032) #26	ENSSVLG00005021990	NRTN (ENSSVLG00005021968) ##15	DUS3L (ENSSVLG00005021792) #27	PRR22 (ENSSVLG00005021755)	LONP1 (ENSSVLG00005021189) #28	ENSSVLG00005021082 #29	HSD11B1L (ENSSVLG00005020980) #30	MICOS13 (ENSSVLG00005020922) #31	SAFB (ENSSVLG00005020852) #32	SAFB2 (ENSSVLG00005020804) #33	ENSSVLG00005020769
Lagomorpha	ANCESTRAL SPECIES	566															ENSGT00940000155332.A #21	ENSGT01050000244879.a.a.a #22
Pika	MODERN SPECIES	5083																ENSOPRG00000001440 #22
Rabbit	MODERN SPECIES	924															ACSBG2 (ENSOCUG00000010163) #21	RFX2 (ENSOCUG00000005005) #22