Murinae	ANCESTRAL SPECIES	24	ENSGT00390000006320 #7	ENSGT00940000161387 #8	ENSGT00940000155464 #9	ENSGT00390000010427.c #10	ENSGT00800000124150 #11	ENSGT00390000016532 #12	ENSGT00390000015433 #13	ENSGT00950000182993.A.b #14	ENSGT00940000158504 #15	ENSGT00940000155776 #16	ENSGT00940000160851 #17	ENSGT00390000002096 #18	ENSGT00530000063460.A.b #19	ENSGT00940000159777 #20	ENSGT00940000155567 #21	ENSGT01050000244902.a.a.a.a #22	ENSGT00390000017462 #23	ENSGT00940000158865 #24	ENSGT00390000005254.i.a.a.a.a ##25	ENSGT00940000162106 #26	ENSGT00940000156804 #27	ENSGT00940000161231 #28	ENSGT00940000156814 #29	ENSGT00940000158747 #30	ENSGT00390000009130.a.a.b #31	ENSGT00390000011383 #32	ENSGT00390000014416 #33	ENSGT00940000159987 #34	ENSGT00390000010075 #35	ENSGT00510000049326.b.b #36	ENSGT00730000112355
Mus	ANCESTRAL SPECIES	22	ENSGT00390000006320 #7	ENSGT00940000161387 #8	ENSGT00940000155464 #9	ENSGT00390000010427.c #10	ENSGT00800000124150 #11	ENSGT00390000016532 #12	ENSGT00390000015433 #13	ENSGT00950000182993.A.b #14	ENSGT00940000158504 #15	ENSGT00940000155776 #16	ENSGT00940000160851 #17	ENSGT00390000002096 #18	ENSGT00530000063460.A.b #19	ENSGT00940000159777 #20	ENSGT00940000155567 #21	ENSGT01050000244902.a.a.a.a #22	ENSGT00390000017462 #23	ENSGT00940000158865 #24	ENSGT00390000005254.i.a.a.a.a ##25	ENSGT00940000162106 #26	ENSGT00940000156804 #27	ENSGT00940000161231 #28	ENSGT00940000156814 #29	ENSGT00940000158747 #30	ENSGT00390000009130.a.a.b #31	ENSGT00390000011383 #32	ENSGT00390000014416 #33	ENSGT00940000159987 #34	ENSGT00390000010075 #35	ENSGT00510000049326.b.b #36	ENSGT00840000130401.d
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000006320 #7	ENSGT00940000161387 #8	ENSGT00940000155464 #9	ENSGT00390000010427.c #10	ENSGT00800000124150 #11	ENSGT00390000016532 #12	ENSGT00390000015433 #13	ENSGT00950000182993.A.b #14	ENSGT00940000158504 #15	ENSGT00940000155776 #16	ENSGT00940000160851 #17	ENSGT00390000002096 #18	ENSGT00530000063460.A.b #19	ENSGT00940000159777 #20	ENSGT00940000155567 #21	ENSGT01050000244902.a.a.a.a #22	ENSGT00390000017462 #23	ENSGT00940000158865 #24	ENSGT00390000005254.i.a.a.a.a ##25	ENSGT00940000162106 #26	ENSGT00940000156804 #27	ENSGT00940000161231 #28	ENSGT00940000156814 #29	ENSGT00940000158747 #30	ENSGT00390000009130.a.a.b #31	ENSGT00390000011383 #32	ENSGT00390000014416 #33	ENSGT00940000159987 #34	ENSGT00390000010075 #35	ENSGT00510000049326.b.b #36
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000006320 #7	ENSGT00940000161387 #8	ENSGT00940000155464 #9	ENSGT00390000010427.c #10	ENSGT00800000124150 #11	ENSGT00390000016532 #12	ENSGT00390000015433 #13	ENSGT00950000182993.A.b #14	ENSGT00940000158504 #15	ENSGT00940000155776 #16	ENSGT00940000160851 #17	ENSGT00390000002096 #18	ENSGT00530000063460.A.b #19	ENSGT00940000159777 #20	ENSGT00940000155567 #21	ENSGT01050000244902.a.a.a.a #22	ENSGT00390000017462 #23	ENSGT00940000158865.g ##24	ENSGT00940000158865.h #24	ENSGT00390000005254.i.a.a.a.a ##25	ENSGT00940000162106 #26	ENSGT00940000156804 #27	ENSGT00940000161231 #28	ENSGT00940000156814 #29	ENSGT00940000158747 #30	ENSGT00390000009130.a.a.b #31	ENSGT00390000011383 #32	ENSGT00390000014416 #33	ENSGT00940000159987 #34	ENSGT00390000010075 #35	ENSGT00510000049326.b.b #36
Mus_C	ANCESTRAL SPECIES	28	ENSGT00390000006320 #7	ENSGT00940000161387 #8	ENSGT00940000155464 #9	ENSGT00390000010427.c #10	ENSGT00800000124150 #11	ENSGT00390000016532 #12	ENSGT00390000015433 #13	ENSGT00950000182993.A.b #14	ENSGT00940000158504 #15	ENSGT00940000155776 #16	ENSGT00940000160851 #17	ENSGT00390000002096 #18	ENSGT00530000063460.A.b #19	ENSGT00940000159777 #20	ENSGT00940000155567 #21	ENSGT01050000244902.a.a.a.a #22	ENSGT00390000017462 #23	ENSGT00940000158865.g ##24	ENSGT00940000158865.h #24	ENSGT00390000005254.i.a.a.a.a ##25	ENSGT00940000162106 #26	ENSGT00940000156804 #27	ENSGT00940000161231 #28	ENSGT00940000156814 #29	ENSGT00940000158747 #30	ENSGT00390000009130.a.a.b #31	ENSGT00390000011383 #32	ENSGT00390000014416 #33	ENSGT00940000159987 #34	ENSGT00390000010075 #35	ENSGT00510000049326.b.b #36
spretus	MODERN SPECIES	6	Nadk2 (MGP_SPRETEiJ_G0020550) #7	Ranbp3l (MGP_SPRETEiJ_G0020549) #8	Slc1a3 (MGP_SPRETEiJ_G0020548) #9	Nipbl (MGP_SPRETEiJ_G0020547) #10	Cplane1 (MGP_SPRETEiJ_G0020546) #11	Nup155 (MGP_SPRETEiJ_G0020545) #12	Wdr70 (MGP_SPRETEiJ_G0020544) #13	Gdnf (MGP_SPRETEiJ_G0020543) #14	Egflam (MGP_SPRETEiJ_G0020542) #15	Lifr (MGP_SPRETEiJ_G0020541) #16	Osmr (MGP_SPRETEiJ_G0020540) #17	Rictor (MGP_SPRETEiJ_G0020539) #18	Fyb (MGP_SPRETEiJ_G0020538) #19	C9 (MGP_SPRETEiJ_G0020537) #20	Dab2 (MGP_SPRETEiJ_G0020536) #21	Ptger4 (MGP_SPRETEiJ_G0020535) #22	Ttc33 (MGP_SPRETEiJ_G0020534) #23	MGP_SPRETEiJ_G0020533 #24	Rpl37 (MGP_SPRETEiJ_G0020532) #25	Card6 (MGP_SPRETEiJ_G0020531) #26	C7 (MGP_SPRETEiJ_G0020530) #27	Mroh2b (MGP_SPRETEiJ_G0020529) #28	C6 (MGP_SPRETEiJ_G0020528) #29	Plcxd3 (MGP_SPRETEiJ_G0020527) #30	Oxct1 (MGP_SPRETEiJ_G0020526) #31	Rimoc1 (MGP_SPRETEiJ_G0020525) #32	Fbxo4 (MGP_SPRETEiJ_G0020524) #33	Ghr (MGP_SPRETEiJ_G0020523) #34	Ccdc152 (MGP_SPRETEiJ_G0020522) #35	MGP_SPRETEiJ_G0020521 #36
Steppe mouse	MODERN SPECIES	2724															ENSMSIG00000031823	Ptger4 (ENSMSIG00000031824) #22	Ttc33 (ENSMSIG00000031825) #23	ENSMSIG00000031826 ##24	ENSMSIG00000031827 #24	Rpl37 (ENSMSIG00000031828) ##25	Card6 (ENSMSIG00000031830) #26	C7 (ENSMSIG00000031831) #27	Mroh2b (ENSMSIG00000031833) #28	C6 (ENSMSIG00000031834) #29
Mouse	MODERN SPECIES	6	Nadk2 (ENSMUSG00000022253) #7	Ranbp3l (ENSMUSG00000048424) #8	Slc1a3 (ENSMUSG00000005360) #9	Nipbl (ENSMUSG00000022141) #10	Cplane1 (ENSMUSG00000039801) #11	Nup155 (ENSMUSG00000022142) #12	Wdr70 (ENSMUSG00000039828) #13	Gdnf (ENSMUSG00000022144) #14	Egflam (ENSMUSG00000042961) #15	Lifr (ENSMUSG00000054263) #16	Osmr (ENSMUSG00000022146) #17	Rictor (ENSMUSG00000050310) #18	Fyb (ENSMUSG00000022148) #19	C9 (ENSMUSG00000022149) #20	Dab2 (ENSMUSG00000022150) #21	Ptger4 (ENSMUSG00000039942) #22	Ttc33 (ENSMUSG00000022151) #23	Prkaa1 (ENSMUSG00000050697) ##24	Rpl37 (ENSMUSG00000041841) ##25	Card6 (ENSMUSG00000041849) #26	C7 (ENSMUSG00000079105) #27	Mroh2b (ENSMUSG00000022155) #28	C6 (ENSMUSG00000022181) #29	Plcxd3 (ENSMUSG00000049148) #30	Oxct1 (ENSMUSG00000022186) #31	Rimoc1 (ENSMUSG00000041935) #32	Fbxo4 (ENSMUSG00000022184) #33	Ghr (ENSMUSG00000055737) #34	Ccdc152 (ENSMUSG00000091119) #35	Selenop (ENSMUSG00000064373) #36
Ryukyu mouse	MODERN SPECIES	6	Nadk2 (MGP_CAROLIEiJ_G0019653) #7	MGP_CAROLIEiJ_G0019652 #8	Slc1a3 (MGP_CAROLIEiJ_G0019651) #9	Nipbl (MGP_CAROLIEiJ_G0019650) #10	Cplane1 (MGP_CAROLIEiJ_G0019649) #11	Nup155 (MGP_CAROLIEiJ_G0019648) #12	Wdr70 (MGP_CAROLIEiJ_G0019647) #13	Gdnf (MGP_CAROLIEiJ_G0019646) #14	Egflam (MGP_CAROLIEiJ_G0019645) #15	Lifr (MGP_CAROLIEiJ_G0019644) #16	Osmr (MGP_CAROLIEiJ_G0019643) #17	Rictor (MGP_CAROLIEiJ_G0019642) #18	Fyb (MGP_CAROLIEiJ_G0019641) #19	C9 (MGP_CAROLIEiJ_G0019640) #20	Dab2 (MGP_CAROLIEiJ_G0019639) #21	Ptger4 (MGP_CAROLIEiJ_G0019638) #22	MGP_CAROLIEiJ_G0019637 #23	Prkaa1 (MGP_CAROLIEiJ_G0019636) #24	Rpl37 (MGP_CAROLIEiJ_G0019635) ##25	Card6 (MGP_CAROLIEiJ_G0019634) #26	C7 (MGP_CAROLIEiJ_G0019633) #27	Mroh2b (MGP_CAROLIEiJ_G0019632) #28	C6 (MGP_CAROLIEiJ_G0019631) #29	Plcxd3 (MGP_CAROLIEiJ_G0019630) #30	Oxct1 (MGP_CAROLIEiJ_G0019629) #31	Rimoc1 (MGP_CAROLIEiJ_G0019628) #32	Fbxo4 (MGP_CAROLIEiJ_G0019627) #33	Ghr (MGP_CAROLIEiJ_G0019626) #34	Ccdc152 (MGP_CAROLIEiJ_G0019625) #35	MGP_CAROLIEiJ_G0019624 #36
Shrew mouse	MODERN SPECIES	2	Nadk2 (MGP_PahariEiJ_G0016034) #7	MGP_PahariEiJ_G0016033 #8	Slc1a3 (MGP_PahariEiJ_G0016032) #9	Nipbl (MGP_PahariEiJ_G0016031) #10	Cplane1 (MGP_PahariEiJ_G0016030) #11	Nup155 (MGP_PahariEiJ_G0016029) #12	Wdr70 (MGP_PahariEiJ_G0016028) #13	Gdnf (MGP_PahariEiJ_G0016027) #14	Egflam (MGP_PahariEiJ_G0016026) #15	Lifr (MGP_PahariEiJ_G0016025) #16	Osmr (MGP_PahariEiJ_G0016024) #17	Rictor (MGP_PahariEiJ_G0016023) #18	Fyb (MGP_PahariEiJ_G0016022) #19	C9 (MGP_PahariEiJ_G0016021) #20	Dab2 (MGP_PahariEiJ_G0016020) #21	Ptger4 (MGP_PahariEiJ_G0016019) #22	Ttc33 (MGP_PahariEiJ_G0016018) #23	Prkaa1 (MGP_PahariEiJ_G0016017) #24	Rpl37 (MGP_PahariEiJ_G0016016) ##25	Card6 (MGP_PahariEiJ_G0016015) #26	C7 (MGP_PahariEiJ_G0016014) #27	Mroh2b (MGP_PahariEiJ_G0016013) #28	MGP_PahariEiJ_G0016012 #29	Plcxd3 (MGP_PahariEiJ_G0016011) #30	Oxct1 (MGP_PahariEiJ_G0016010) #31	Rimoc1 (MGP_PahariEiJ_G0016009) #32	Fbxo4 (MGP_PahariEiJ_G0016008) #33	Ghr (MGP_PahariEiJ_G0016007) #34	Ccdc152 (MGP_PahariEiJ_G0016006) #35	MGP_PahariEiJ_G0016005 #36	MGP_PahariEiJ_G0016004
Rat	MODERN SPECIES	11	AABR07008421.1 (ENSRNOG00000030748)	Nipbl (ENSRNOG00000056907) #10	Cplane1 (ENSRNOG00000042118) #11	Nup155 (ENSRNOG00000013411) #12	Wdr70 (ENSRNOG00000013336) #13	Gdnf (ENSRNOG00000012819) #14	Egflam (ENSRNOG00000012058) #15	Lifr (ENSRNOG00000011696) #16	Osmr (ENSRNOG00000033192) #17	Rictor (ENSRNOG00000011341) #18	Fyb1 (ENSRNOG00000013886) #19	C9 (ENSRNOG00000013736) #20	Dab2 (ENSRNOG00000028930) #21	ENSRNOG00000063101	Rps15al4 (ENSRNOG00000052207)	Ptger4 (ENSRNOG00000013240) #22	Ttc33 (ENSRNOG00000013217) #23	Prkaa1 (ENSRNOG00000012799) #24	Rpl37 (ENSRNOG00000064545) ##25	Card6 (ENSRNOG00000001271) #26	Mroh2b (ENSRNOG00000042327) #28	C6 (ENSRNOG00000024115) #29	Plcxd3 (ENSRNOG00000014550) #30	ENSRNOG00000065139	Oxct1 (ENSRNOG00000043094) #31	Rimoc1 (ENSRNOG00000052775) #32	Fbxo4 (ENSRNOG00000015622) #33	Ghr (ENSRNOG00000015654) #34	Ccdc152 (ENSRNOG00000039473) #35	Selenop (ENSRNOG00000053086) #36	ENSRNOG00000068842