Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00940000154457.a.b ##12 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00910000147121 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 Cetacea ANCESTRAL SPECIES 8 ENSGT00940000161132 #7 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #9 ENSGT00940000154457.a.a.c.a #12 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ##9 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.a.b #33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Odontoceti ANCESTRAL SPECIES 7 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #9 ENSGT00940000154457.a.a.c.a #12 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ##9 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00730000111429.b ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.a.b #33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #9 ENSGT00940000154457.a.a.c.a #12 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ##9 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00730000111429.b ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.a.b #33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000161132 #7 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #9 ENSGT00900000143450 #10 ENSGT00940000154457.a.a.c.a #12 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00730000111429.b ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.a.b #33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000161132 #7 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #9 ENSGT00900000143450 #10 ENSGT00940000154457.a.a.c.a #12 ENSGT01010000229521 #13 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.a.b #33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Narwhal MODERN SPECIES 313 DHH (ENSMMNG00015021606) #7 LMBR1L (ENSMMNG00015021626) #8 TUBA1B (ENSMMNG00015021671) #9 ENSMMNG00015021709 #10 ENSMMNG00015021713 #11 ENSMMNG00015021728 #12 ENSMMNG00015021733 #13 PRPH (ENSMMNG00015013461) #14 TROAP (ENSMMNG00015013490) #15 C1QL4 (ENSMMNG00015013515) #16 SPATS2 (ENSMMNG00015013537) #17 KCNH3 (ENSMMNG00015013644) #18 MCRS1 (ENSMMNG00015013696) #19 PRPF40B (ENSMMNG00015013762) #20 FMNL3 (ENSMMNG00015013853) #21 TMBIM6 (ENSMMNG00015013952) #22 NCKAP5L (ENSMMNG00015013977) #23 BCDIN3D (ENSMMNG00015013997) #24 FAIM2 (ENSMMNG00015014009) #25 AQP2 (ENSMMNG00015014027) #26 AQP5 (ENSMMNG00015014040) #27 AQP6 (ENSMMNG00015014051) #28 RACGAP1 (ENSMMNG00015014069) #29 ASIC1 (ENSMMNG00015014101) #30 ENSMMNG00015014146 #31 GPD1 (ENSMMNG00015014170) #32 ENSMMNG00015014177 #33 CERS5 (ENSMMNG00015014184) #34 LIMA1 (ENSMMNG00015014204) #35 ENSMMNG00015014228 #36 LARP4 (ENSMMNG00015014255) #37 Beluga whale MODERN SPECIES 39 LMBR1L (ENSDLEG00000005547) #8 ENSDLEG00000005539 #10 ENSDLEG00000005535 #11 ENSDLEG00000005525 #9 ENSDLEG00000005507 #12 ENSDLEG00000005499 #13 PRPH (ENSDLEG00000005489) #14 TROAP (ENSDLEG00000005478) #15 C1QL4 (ENSDLEG00000005472) #16 SPATS2 (ENSDLEG00000016468) #17 KCNH3 (ENSDLEG00000016437) #18 MCRS1 (ENSDLEG00000016407) #19 FAM186B (ENSDLEG00000016369) PRPF40B (ENSDLEG00000016312) #20 FMNL3 (ENSDLEG00000016175) #21 TMBIM6 (ENSDLEG00000016148) #22 NCKAP5L (ENSDLEG00000016120) #23 BCDIN3D (ENSDLEG00000016113) #24 FAIM2 (ENSDLEG00000016092) #25 AQP2 (ENSDLEG00000016070) #26 AQP5 (ENSDLEG00000016064) #27 AQP6 (ENSDLEG00000016053) #28 RACGAP1 (ENSDLEG00000016029) #29 ASIC1 (ENSDLEG00000015917) #30 SMARCD1 (ENSDLEG00000015671) #31 GPD1 (ENSDLEG00000015629) #32 ENSDLEG00000015620 #33 CERS5 (ENSDLEG00000015590) #34 LIMA1 (ENSDLEG00000015569) #35 ENSDLEG00000015550 #36 LARP4 (ENSDLEG00000015261) #37 Vaquita MODERN SPECIES 1 LMBR1L (ENSPSNG00000011226) #8 TUBA1B (ENSPSNG00000011161) #9 KLHL8 (ENSPSNG00000011123) #11 TUBA1A (ENSPSNG00000010994) ##9 ENSPSNG00000010933 #12 PRPH (ENSPSNG00000010814) #14 TROAP (ENSPSNG00000010746) #15 C1QL4 (ENSPSNG00000010701) #16 ENSPSNG00000010655 SPATS2 (ENSPSNG00000010631) #17 KCNH3 (ENSPSNG00000010468) #18 MCRS1 (ENSPSNG00000010283) #19 FAM186B (ENSPSNG00000010181) PRPF40B (ENSPSNG00000009876) #20 FMNL3 (ENSPSNG00000009775) #21 TMBIM6 (ENSPSNG00000009712) #22 ENSPSNG00000011171 NCKAP5L (ENSPSNG00000011101) #23 BCDIN3D (ENSPSNG00000011042) #24 FAIM2 (ENSPSNG00000010923) #25 AQP2 (ENSPSNG00000010847) #26 AQP5 (ENSPSNG00000010789) #27 AQP6 (ENSPSNG00000010729) #28 ENSPSNG00000010688 RACGAP1 (ENSPSNG00000010669) #29 ASIC1 (ENSPSNG00000010445) #30 SMARCD1 (ENSPSNG00000010298) #31 GPD1 (ENSPSNG00000010118) #32 CERS5 (ENSPSNG00000009960) #34 LIMA1 (ENSPSNG00000009785) #35 LARP4 (ENSPSNG00000009414) #37 Dolphin MODERN SPECIES 635 TMBIM6 (ENSTTRG00000000999) #22 NCKAP5L (ENSTTRG00000001000) #23 ENSTTRG00000021406 #23 BCDIN3D (ENSTTRG00000001001) #24 FAIM2 (ENSTTRG00000001002) #25 AQP2 (ENSTTRG00000001003) #26 AQP5 (ENSTTRG00000001004) #27 AQP6 (ENSTTRG00000001005) #28 RACGAP1 (ENSTTRG00000001006) #29 ASIC1 (ENSTTRG00000001008) #30 SMARCD1 (ENSTTRG00000001010) #31 GPD1 (ENSTTRG00000001012) #32 CERS5 (ENSTTRG00000001014) #34 LIMA1 (ENSTTRG00000001015) #35 Sperm whale MODERN SPECIES 17 RHEBL1 (ENSPCTG00005008730) DHH (ENSPCTG00005008692) #7 LMBR1L (ENSPCTG00005008612) #8 ENSPCTG00005008583 #10 ENSPCTG00005008557 #11 TUBA1B (ENSPCTG00005008408) #9 TROAP (ENSPCTG00005008366) #15 C1QL4 (ENSPCTG00005008336) #16 ENSPCTG00005008318 SPATS2 (ENSPCTG00005008268) #17 KCNH3 (ENSPCTG00005008212) #18 MCRS1 (ENSPCTG00005008165) #19 ENSPCTG00005008137 PRPF40B (ENSPCTG00005007929) #20 ENSPCTG00005007869 #21 TMBIM6 (ENSPCTG00005007808) #22 ENSPCTG00005007783 #30 RACGAP1 (ENSPCTG00005007703) #29 AQP6 (ENSPCTG00005007667) #28 AQP5 (ENSPCTG00005007658) #27 AQP2 (ENSPCTG00005007639) #26 FAIM2 (ENSPCTG00005007571) #25 BCDIN3D (ENSPCTG00005007543) #24 LIMA1 (ENSPCTG00005007407) #35 ENSPCTG00005007353 #36 LARP4 (ENSPCTG00005007174) #37 DIP2B (ENSPCTG00005006865) ENSPCTG00005006806 TMPRSS12 (ENSPCTG00005006754) ENSPCTG00005006742 HIGD1C (ENSPCTG00005018312) Blue whale MODERN SPECIES 1 LMBR1L (ENSBMSG00010017366) #8 ENSBMSG00010017482 ##9 ENSBMSG00010017570 #10 TUBA1C (ENSBMSG00010017602) ##9 PRPH (ENSBMSG00010017649) #14 TROAP (ENSBMSG00010017715) #15 C1QL4 (ENSBMSG00010017749) #16 SPATS2 (ENSBMSG00010017793) #17 ENSBMSG00010017850 ENSBMSG00010017857 KCNH3 (ENSBMSG00010017898) #18 MCRS1 (ENSBMSG00010017976) #19 FAM186B (ENSBMSG00010018089) PRPF40B (ENSBMSG00010018142) #20 FMNL3 (ENSBMSG00010018480) #21 TMBIM6 (ENSBMSG00010018550) #22 NCKAP5L (ENSBMSG00010018586) #23 BCDIN3D (ENSBMSG00010018604) #24 FAIM2 (ENSBMSG00010018618) #25 AQP2 (ENSBMSG00010018640) #26 AQP5 (ENSBMSG00010018670) #27 AQP6 (ENSBMSG00010018692) #28 RACGAP1 (ENSBMSG00010018749) #29 ASIC1 (ENSBMSG00010018805) #30 ENSBMSG00010018920 #31 GPD1 (ENSBMSG00010019000) #32 ENSBMSG00010019052 #33 ENSBMSG00010019082 #34 ENSBMSG00010019117 #34 ENSBMSG00010019154 #35 ENSBMSG00010019191 Pecora ANCESTRAL SPECIES 3 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00940000154457.a.b ##12 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00910000147121 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 Yarkand deer MODERN SPECIES 22 RHEBL1 (ENSCHYG00000005073) DHH (ENSCHYG00000005055) #7 LMBR1L (ENSCHYG00000003957) #8 ENSCHYG00000003953 TUBA1B (ENSCHYG00000003929) #9 PRPH (ENSCHYG00000003901) #14 TROAP (ENSCHYG00000003840) #15 C1QL4 (ENSCHYG00000003823) #16 DNAJC22 (ENSCHYG00000003816) SPATS2 (ENSCHYG00000003787) #17 KCNH3 (ENSCHYG00000003766) #18 MCRS1 (ENSCHYG00000003691) #19 FAM186B (ENSCHYG00000003658) ENSCHYG00000003405 FMNL3 (ENSCHYG00000003210) #21 TMBIM6 (ENSCHYG00000003153) #22 NCKAP5L (ENSCHYG00000003118) #23 BCDIN3D (ENSCHYG00000003105) #24 FAIM2 (ENSCHYG00000003080) #25 AQP2 (ENSCHYG00000003063) #26 AQP5 (ENSCHYG00000003046) #27 AQP6 (ENSCHYG00000003038) #28 RACGAP1 (ENSCHYG00000002976) #29 ASIC1 (ENSCHYG00000002925) #30 SMARCD1 (ENSCHYG00000002846) #31 GPD1 (ENSCHYG00000002811) #32 ENSCHYG00000002799 ##33 CERS5 (ENSCHYG00000002775) #34 LIMA1 (ENSCHYG00000002754) #35 ENSCHYG00000002739 #36 LARP4 (ENSCHYG00000002689) #37 Percora_a ANCESTRAL SPECIES 3 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00940000154457.a.b ##12 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00910000147121 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 Siberian musk deer MODERN SPECIES 320 ENSMMSG00000012207 ENSMMSG00000012225 ##9 ENSMMSG00000012233 ENSMMSG00000012239 ##12 PRPH (ENSMMSG00000012252) #14 ENSMMSG00000012285 ENSMMSG00000012302 #15 C1QL4 (ENSMMSG00000012341) #16 DNAJC22 (ENSMMSG00000014980) SPATS2 (ENSMMSG00000014998) #17 KCNH3 (ENSMMSG00000015035) #18 MCRS1 (ENSMMSG00000015080) #19 FAM186B (ENSMMSG00000015148) PRPF40B (ENSMMSG00000015184) #20 FMNL3 (ENSMMSG00000015295) #21 TMBIM6 (ENSMMSG00000015448) #22 NCKAP5L (ENSMMSG00000015482) #23 BCDIN3D (ENSMMSG00000015515) #24 FAIM2 (ENSMMSG00000015530) #25 AQP2 (ENSMMSG00000015558) #26 AQP5 (ENSMMSG00000015578) #27 AQP6 (ENSMMSG00000015598) #28 RACGAP1 (ENSMMSG00000015616) #29 ASIC1 (ENSMMSG00000015664) #30 SMARCD1 (ENSMMSG00000015795) #31 GPD1 (ENSMMSG00000015936) #32 ENSMMSG00000016024 ##33 CERS5 (ENSMMSG00000016047) #34 LIMA1 (ENSMMSG00000016083) #35 ENSMMSG00000016161 #36 ENSMMSG00000016204 #37 Bovidae DUPLICATION Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES ENSGT01050000244940.a.a.bb.a #22 Bovinae ANCESTRAL SPECIES ENSGT00940000160142 ENSGT01030000234667.a.a.a.a.b ENSGT00390000003628.b ENSGT00940000164415 ENSGT00940000159655 ENSGT00940000161783 ENSGT00940000161994 ENSGT00940000161950 ENSGT00940000161982 ENSGT00940000162192 ENSGT00940000160849 ENSGT00940000159382 ENSGT00940000161855 ENSGT00940000161077 ENSGT00940000162203 ENSGT01050000244940.a.a.bb.a #22 ENSGT00940000161968 ENSGT00390000001157.C.jc ENSGT00390000001157.B ENSGT00940000160295.v ENSGT00940000160443.d ENSGT00940000160295.u ENSGT00940000160443.c.a ENSGT00940000160443.c.b ENSGT00940000162736.i ENSGT00940000155433 ENSGT00940000159486.`b.a.a.b.b ENSGT00940000164263 ENSGT00940000163416.p.a.b ENSGT00940000163416.o.a.b.b.a ENSGT00940000163416.p.b.b.b Bos ANCESTRAL SPECIES 1 ENSGT00940000159647 ENSGT00940000160142 ENSGT01030000234667.a.a.a.a.b ENSGT00390000003628.b ENSGT00940000159655 ENSGT00940000161783 ENSGT00940000161994 ENSGT00940000161950 ENSGT00940000161982 ENSGT00940000162192 ENSGT00940000160849 ENSGT00940000159382 ENSGT00940000161855 ENSGT00940000161077 ENSGT00940000162203 ENSGT01050000244940.a.a.bb.a #22 ENSGT00940000161968 ENSGT00390000001157.C.jc.i.a ENSGT00390000001157.C.jc.j ENSGT00940000160295.v ENSGT00940000160443.d ENSGT00940000160443.c.a ENSGT00940000160443.c.b ENSGT00940000162736.i ENSGT00940000160295.u ENSGT00940000155433 ENSGT00940000159486.`b.a.a.b.b.c.a.b ENSGT00940000164263 ENSGT00940000163416.p.a.b ENSGT00940000163416.p.b.b.b.c.b ENSGT00940000163658.f Bos_a ANCESTRAL SPECIES ENSGT00940000159647 ENSGT00940000160142 ENSGT01030000234667.a.a.a.a.b ENSGT00390000003628.b ENSGT00940000159655 ENSGT00940000161783 ENSGT00940000161994 ENSGT00940000161950 ENSGT00940000161982 ENSGT00940000162192 ENSGT00940000160849 ENSGT00940000159382 ENSGT00940000161855 ENSGT00940000161077 ENSGT00940000162203 ENSGT01050000244940.a.a.bb.a #22 ENSGT00940000161968 ENSGT00390000001157.C.jc.i.a ENSGT00390000001157.C.jc.i.b ENSGT00390000001157.B ENSGT00940000160295.v ENSGT00940000160443.d ENSGT00940000160443.c.a ENSGT00940000160443.c.b ENSGT00940000162736.i.b ENSGT00940000159486.`b.a.a.b.b.d ENSGT00940000159486.`b.a.a.b.b.c.b ENSGT00940000163416.o.a.b.b.b ENSGT00940000163416.p.b.b.a.b ENSGT00940000163416.p.b.b.a.a ENSGT00940000163416.p.b.b.b.c.b Wild yak MODERN SPECIES 1109 ENSBMUG00000007508 KRT26 (ENSBMUG00000007503) KRT27 (ENSBMUG00000007494) KRT28 (ENSBMUG00000007482) KRT10 (ENSBMUG00000007473) KRT12 (ENSBMUG00000007467) KRT20 (ENSBMUG00000007456) KRT23 (ENSBMUG00000007436) KRT39 (ENSBMUG00000007430) ENSBMUG00000007422 #22 KRT40 (ENSBMUG00000007416) ENSBMUG00000007403 ENSBMUG00000007396 ENSBMUG00000007393 ENSBMUG00000007389 ENSBMUG00000007379 ENSBMUG00000007360 ENSBMUG00000007333 ENSBMUG00000007321 ENSBMUG00000007315 ENSBMUG00000007308 ENSBMUG00000007255 KRTAP4-1 (ENSBMUG00000007244) ENSBMUG00000007229 American bison MODERN SPECIES 3101 TNS4 (ENSBBBG00000024883) CCR7 (ENSBBBG00000024903) SMARCE1 (ENSBBBG00000024947) ENSBBBG00000007827 KRT222 (ENSBBBG00000024971) KRT24 (ENSBBBG00000024991) KRT25 (ENSBBBG00000025011) KRT26 (ENSBBBG00000006612) KRT27 (ENSBBBG00000025042) KRT28 (ENSBBBG00000007843) KRT10 (ENSBBBG00000006646) KRT12 (ENSBBBG00000025119) KRT20 (ENSBBBG00000025144) KRT23 (ENSBBBG00000025161) KRT39 (ENSBBBG00000006669) ENSBBBG00000025197 #22 KRT40 (ENSBBBG00000025230) ENSBBBG00000025235 ENSBBBG00000008086 ENSBBBG00000025241 ENSBBBG00000025245 ENSBBBG00000006688 ENSBBBG00000010112 ENSBBBG00000010115 ENSBBBG00000010119 ENSBBBG00000010122 ENSBBBG00000010127 ENSBBBG00000010130 ENSBBBG00000001711 ENSBBBG00000010134 ENSBBBG00000010136 Caprinae ANCESTRAL SPECIES ENSGT01050000244940.a.a.bb.a #22 Rambouillet Sheep MODERN SPECIES 19 LMBR1L (ENSOARG00020001056) #8 ENSOARG00020001038 #9 TUBA1A (ENSOARG00020000988) ##9 TUBA1C (ENSOARG00020000944) #9 ENSOARG00020000929 ##12 PRPH (ENSOARG00020000909) #14 TROAP (ENSOARG00020000841) #15 C1QL4 (ENSOARG00020000814) #16 DNAJC22 (ENSOARG00020000805) ENSOARG00020000793 #17 KCNH3 (ENSOARG00020000757) #18 MCRS1 (ENSOARG00020000707) #19 FAM186B (ENSOARG00020000686) PRPF40B (ENSOARG00020000603) #20 FMNL3 (ENSOARG00020000387) #21 ENSOARG00020000307 #22 NCKAP5L (ENSOARG00020000181) #23 BCDIN3D (ENSOARG00020023998) #24 FAIM2 (ENSOARG00020023956) #25 AQP2 (ENSOARG00020023932) #26 AQP5 (ENSOARG00020023923) #27 AQP6 (ENSOARG00020023881) #28 RACGAP1 (ENSOARG00020023860) #29 ASIC1 (ENSOARG00020023731) #30 SMARCD1 (ENSOARG00020023519) #31 GPD1 (ENSOARG00020023447) #32 COX14 (ENSOARG00020023432) ##33 ENSOARG00020023406 #34 LIMA1 (ENSOARG00020023296) #35 ENSOARG00020023263 #36 ENSOARG00020023257 Bovidae ANCESTRAL SPECIES 3 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00940000154457.a.b ##12 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.g #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00910000147121 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 Bovinae ANCESTRAL SPECIES 17 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #9 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #9 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.g.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Bos ANCESTRAL SPECIES 2 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #9 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #9 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.g.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Bos_a ANCESTRAL SPECIES 3 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.a.a ##9 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #9 ENSGT00940000160203 #14 ENSGT00950000185831 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.g.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 Wild yak MODERN SPECIES 811 ENSBMUG00000023231 ENSBMUG00000023265 ##9 ENSBMUG00000023293 #9 ENSBMUG00000023299 #9 PRPH (ENSBMUG00000023309) #14 ENSBMUG00000023317 ENSBMUG00000023324 #15 C1QL4 (ENSBMUG00000023330) #16 DNAJC22 (ENSBMUG00000023341) SPATS2 (ENSBMUG00000023357) #17 KCNH3 (ENSBMUG00000023375) #18 MCRS1 (ENSBMUG00000023401) #19 FAM186B (ENSBMUG00000023416) PRPF40B (ENSBMUG00000023428) #20 FMNL3 (ENSBMUG00000023535) #21 ENSBMUG00000023595 #22 NCKAP5L (ENSBMUG00000023615) #23 BCDIN3D (ENSBMUG00000023628) #24 FAIM2 (ENSBMUG00000023660) #25 AQP2 (ENSBMUG00000023679) #26 AQP5 (ENSBMUG00000023686) #27 AQP6 (ENSBMUG00000023717) #28 RACGAP1 (ENSBMUG00000023754) #29 ENSBMUG00000023773 #30 Bos_b ANCESTRAL SPECIES 4 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #9 ENSGT00960000190898 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #9 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.a #9 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.g.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 ENSGT00940000154409 #37 ENSGT00950000182997.a.b.b.b Cow MODERN SPECIES 24 TUBA1B (ENSBTAG00000012244) #9 ENSBTAG00000052201 TUBA1A (ENSBTAG00000001489) ##9 TUBA1C (ENSBTAG00000039992) #9 ENSBTAG00000037775 #9 PRPH (ENSBTAG00000017864) #14 TROAP (ENSBTAG00000008499) #15 C1QL4 (ENSBTAG00000032567) #16 DNAJC22 (ENSBTAG00000016398) SPATS2 (ENSBTAG00000004660) #17 KCNH3 (ENSBTAG00000019277) #18 MCRS1 (ENSBTAG00000019281) #19 FAM186B (ENSBTAG00000019283) PRPF40B (ENSBTAG00000016589) #20 FMNL3 (ENSBTAG00000016593) #21 TMBIM6 (ENSBTAG00000018588) #22 NCKAP5L (ENSBTAG00000004851) #23 BCDIN3D (ENSBTAG00000017781) #24 FAIM2 (ENSBTAG00000017504) #25 AQP2 (ENSBTAG00000008374) #26 AQP5 (ENSBTAG00000026813) #28 RACGAP1 (ENSBTAG00000012784) #29 ASIC1 (ENSBTAG00000000970) #30 SMARCD1 (ENSBTAG00000037935) #31 GPD1 (ENSBTAG00000016296) #32 COX14 (ENSBTAG00000000808) ##33 CERS5 (ENSBTAG00000017395) #34 LIMA1 (ENSBTAG00000012342) #35 FAM186A (ENSBTAG00000023546) #36 LARP4 (ENSBTAG00000017164) #37 ENSBTAG00000032790 American bison MODERN SPECIES 3297 DHH (ENSBBBG00000023379) #7 LMBR1L (ENSBBBG00000006114) #8 TUBA1B (ENSBBBG00000023348) #9 ENSBBBG00000023336 TUBA1A (ENSBBBG00000007243) ##9 ENSBBBG00000023318 ENSBBBG00000006097 #15 C1QL4 (ENSBBBG00000023297) #16 DNAJC22 (ENSBBBG00000023287) SPATS2 (ENSBBBG00000006090) #17 KCNH3 (ENSBBBG00000023233) #18 MCRS1 (ENSBBBG00000023218) #19 FAM186B (ENSBBBG00000000327) PRPF40B (ENSBBBG00000000351) #20 FMNL3 (ENSBBBG00000000454) #21 ENSBBBG00000023098 #22 NCKAP5L (ENSBBBG00000023063) #23 BCDIN3D (ENSBBBG00000023040) #24 FAIM2 (ENSBBBG00000006042) #25 AQP2 (ENSBBBG00000023008) #26 AQP5 (ENSBBBG00000007531) #27 AQP6 (ENSBBBG00000022994) #28 RACGAP1 (ENSBBBG00000022976) #29 ASIC1 (ENSBBBG00000022870) #30 SMARCD1 (ENSBBBG00000022825) #31 GPD1 (ENSBBBG00000005992) #32 ENSBBBG00000022762 ##33 CERS5 (ENSBBBG00000022759) #34 LIMA1 (ENSBBBG00000022743) #35 ENSBBBG00000005973 #36 LARP4 (ENSBBBG00000022641) #37 Caprinae ANCESTRAL SPECIES ENSGT00940000161132 #7 ENSGT00390000007809.a #8 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #9 ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##9 ENSGT00940000154457.a.b ##12 ENSGT00940000160203 #14 ENSGT00390000012132 #15 ENSGT00940000155969 #16 ENSGT00390000012136 ENSGT00390000001138.a.h.a #17 ENSGT00940000161742 #18 ENSGT00390000005536 #19 ENSGT00940000162031 ENSGT00930000150980.b #20 ENSGT00940000159962 #21 ENSGT01050000244940.a.a.bb.b #22 ENSGT00530000063607.a #23 ENSGT00940000153993.B #24 ENSGT01050000244890.a.b.b #25 ENSGT00940000160612.d #26 ENSGT00940000161557.b #27 ENSGT00940000161949 #28 ENSGT00940000154610.e.b #29 ENSGT00940000158414 #30 ENSGT00910000147121 ENSGT00940000156629 #31 ENSGT00390000003114.e.a #32 ENSGT00390000002190.b ##33 ENSGT01030000234515.a.a.a.c #34 ENSGT00940000158313 #35 ENSGT00990000203730 #36 Goat MODERN SPECIES 24 TUBA1B (ENSCHIG00000018025) #9 TUBA1A (ENSCHIG00000022988) ##9 ENSCHIG00000025067 ##12 ENSCHIG00000019237 ##12 PRPH (ENSCHIG00000011830) #14 ENSCHIG00000027060 TROAP (ENSCHIG00000011079) #15 C1QL4 (ENSCHIG00000012773) #16 DNAJC22 (ENSCHIG00000021631) ENSCHIG00000026771 #17 KCNH3 (ENSCHIG00000013580) #18 MCRS1 (ENSCHIG00000019172) #19 FAM186B (ENSCHIG00000024871) PRPF40B (ENSCHIG00000024014) #20 FMNL3 (ENSCHIG00000015654) #21 TMBIM6 (ENSCHIG00000001154) #22 NCKAP5L (ENSCHIG00000027024) #23 BCDIN3D (ENSCHIG00000014358) #24 FAIM2 (ENSCHIG00000019021) #25 AQP2 (ENSCHIG00000024043) #26 AQP5 (ENSCHIG00000009412) #27 AQP6 (ENSCHIG00000013540) #28 RACGAP1 (ENSCHIG00000009875) #29 ASIC1 (ENSCHIG00000026006) #30 ENSCHIG00000008241 SMARCD1 (ENSCHIG00000016287) #31 GPD1 (ENSCHIG00000020256) #32 COX14 (ENSCHIG00000007195) ##33 ENSCHIG00000010672 #34 LIMA1 (ENSCHIG00000026369) #35 ENSCHIG00000020047 #36 Bovidae ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Caprinae ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Rambouillet Sheep MODERN SPECIES 2 IGFBP4 (ENSOARG00020007791) TNS4 (ENSOARG00020007745) CCR7 (ENSOARG00020007720) SMARCE1 (ENSOARG00020007516) KRT222 (ENSOARG00020007428) KRT24 (ENSOARG00020007351) KRT25 (ENSOARG00020007286) KRT26 (ENSOARG00020007244) KRT27 (ENSOARG00020007155) KRT28 (ENSOARG00020007049) KRT10 (ENSOARG00020006954) KRT12 (ENSOARG00020006858) KRT20 (ENSOARG00020006793) KRT23 (ENSOARG00020006727) KRT39 (ENSOARG00020006647) ENSOARG00020006570 #22 KRT40 (ENSOARG00020006496) BIIIB4 (ENSOARG00020006476) ENSOARG00020006457 ENSOARG00020006438 KAP3.2 (ENSOARG00020006425) KRTAP1-3 (ENSOARG00020006325) KRTAP1-1 (ENSOARG00020006263) ENSOARG00020006246 ENSOARG00020006235 ENSOARG00020006222 ENSOARG00020006213 ENSOARG00020006204 ENSOARG00020006171 ENSOARG00020006163 ENSOARG00020006135 Bovinae ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Bos ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Bos_a ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Domestic yak MODERN SPECIES 24 LMBR1L (ENSBGRG00000001347) #8 TUBA1B (ENSBGRG00000001452) #9 ENSBGRG00000001508 ENSBGRG00000001514 TUBA1C (ENSBGRG00000001528) #9 PRPH (ENSBGRG00000001572) #14 TROAP (ENSBGRG00000001616) #15 C1QL4 (ENSBGRG00000001682) #16 DNAJC22 (ENSBGRG00000001696) SPATS2 (ENSBGRG00000001721) #17 KCNH3 (ENSBGRG00000001752) #18 MCRS1 (ENSBGRG00000001780) #19 FAM186B (ENSBGRG00000001837) PRPF40B (ENSBGRG00000001878) #20 FMNL3 (ENSBGRG00000002044) #21 TMBIM6 (ENSBGRG00000002428) #22 NCKAP5L (ENSBGRG00000002464) #23 BCDIN3D (ENSBGRG00000002571) #24 FAIM2 (ENSBGRG00000002579) #25 AQP2 (ENSBGRG00000002620) #26 AQP5 (ENSBGRG00000002644) #27 AQP6 (ENSBGRG00000002662) #28 RACGAP1 (ENSBGRG00000002692) #29 ASIC1 (ENSBGRG00000002768) #30 SMARCD1 (ENSBGRG00000002849) #31 GPD1 (ENSBGRG00000002916) #32 COX14 (ENSBGRG00000002947) ##33 CERS5 (ENSBGRG00000002954) #34 LIMA1 (ENSBGRG00000002970) #35 ENSBGRG00000003038 #36 LARP4 (ENSBGRG00000003121) #37 Bos_b ANCESTRAL SPECIES ENSGT01050000244940.a.a.cb #22 Hybrid Bos Indicus MODERN SPECIES 24 LMBR1L (ENSBIXG00005019839) #8 ENSBIXG00005019748 ##12 ENSBIXG00005003208 ENSBIXG00005019629 #9 ENSBIXG00005019597 #9 PRPH (ENSBIXG00005003191) #14 TROAP (ENSBIXG00005019486) #15 C1QL4 (ENSBIXG00005019453) #16 DNAJC22 (ENSBIXG00005019439) ENSBIXG00005003162 #17 KCNH3 (ENSBIXG00005019387) #18 MCRS1 (ENSBIXG00005019376) #19 FAM186B (ENSBIXG00005006144) PRPF40B (ENSBIXG00005019251) #20 FMNL3 (ENSBIXG00005019046) #21 TMBIM6 (ENSBIXG00005003088) #22 NCKAP5L (ENSBIXG00005018903) #23 BCDIN3D (ENSBIXG00005003070) #24 FAIM2 (ENSBIXG00005018825) #25 AQP2 (ENSBIXG00005003048) #26 ENSBIXG00005003033 #28 RACGAP1 (ENSBIXG00005006244) #29 ASIC1 (ENSBIXG00005018518) #30 SMARCD1 (ENSBIXG00005002988) #31 GPD1 (ENSBIXG00005018431) #32 ENSBIXG00005018391 ##33 CERS5 (ENSBIXG00005018345) #34 LIMA1 (ENSBIXG00005018314) #35 ENSBIXG00005018258 #36 LARP4 (ENSBIXG00005018243) #37 DIP2B (ENSBIXG00005018135)