Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.b ##11	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT01090000263345	ENSGT00940000161557.b #27	ENSGT01070000257243	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Equus	ANCESTRAL SPECIES	16	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.b #9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Horse	MODERN SPECIES	27	DHH (ENSECAG00000010603) #7	LMBR1L (ENSECAG00000011362) #8	ENSECAG00000033690 #9	TUBA1B (ENSECAG00000059551) #10	TUBA1A (ENSECAG00000030778) #11	PRPH (ENSECAG00000010432) #12	TROAP (ENSECAG00000017926) #13	C1QL4 (ENSECAG00000005475) #14	DNAJC22 (ENSECAG00000002744) #15	SPATS2 (ENSECAG00000005508) #16	KCNH3 (ENSECAG00000009934) #17	MCRS1 (ENSECAG00000011683) #18	PRPF40B (ENSECAG00000020691) #19	FAM186B (ENSECAG00000020606) #20	FMNL3 (ENSECAG00000005957) #21	TMBIM6 (ENSECAG00000013149) #22	NCKAP5L (ENSECAG00000019044) #23	BCDIN3D (ENSECAG00000020861) #24	FAIM2 (ENSECAG00000021544) #25	AQP2 (ENSECAG00000023681) #26	AQP5 (ENSECAG00000008500) #27	AQP6 (ENSECAG00000043211) #28	RACGAP1 (ENSECAG00000010821) #29	ASIC1 (ENSECAG00000016366) #30	SMARCD1 (ENSECAG00000021885) #31	GPD1 (ENSECAG00000001568) #32	ENSECAG00000039282 #33	CERS5 (ENSECAG00000007356) #34	LIMA1 (ENSECAG00000011991) #35	FAM186A (ENSECAG00000028479) #36	LARP4 (ENSECAG00000012479) #37
Donkey	MODERN SPECIES	14	DHH (ENSEASG00005027549) #7	LMBR1L (ENSEASG00005001084) #8	TUBA1B (ENSEASG00005029815) #10	ENSEASG00005027053 ##11	TUBA1C (ENSEASG00005001123) #10	PRPH (ENSEASG00005001134) #12	TROAP (ENSEASG00005001145) #13	C1QL4 (ENSEASG00005001169) #14	DNAJC22 (ENSEASG00005034193) #15	SPATS2 (ENSEASG00005001180) #16	KCNH3 (ENSEASG00005001194) #17	MCRS1 (ENSEASG00005001200) #18	FAM186B (ENSEASG00005001207) #20	PRPF40B (ENSEASG00005001240) #19	FMNL3 (ENSEASG00005001551) #21	TMBIM6 (ENSEASG00005003998) #22	NCKAP5L (ENSEASG00005004097) #23	BCDIN3D (ENSEASG00005028175) #24	FAIM2 (ENSEASG00005004220) #25	ENSEASG00005032977	AQP2 (ENSEASG00005004228) #26	AQP5 (ENSEASG00005004240) #27	ENSEASG00005004243 #28	RACGAP1 (ENSEASG00005004246) #29	ASIC1 (ENSEASG00005004253) #30	SMARCD1 (ENSEASG00005004268) #31	GPD1 (ENSEASG00005004275) #32	ENSEASG00005030344 #33	CERS5 (ENSEASG00005004290) #34	LIMA1 (ENSEASG00005004304) #35	FAM186A (ENSEASG00005028951) #36
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Megabat	MODERN SPECIES	8515																TMBIM6 (ENSPVAG00000016821) #22	NCKAP5L (ENSPVAG00000016820) #23	ENSPVAG00000024169
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.b.b ##11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Microbat	MODERN SPECIES	1028	TUBA1B (ENSMLUG00000002622) #10	TUBA1A (ENSMLUG00000010845) #11	ENSMLUG00000024840 ##11	PRPH (ENSMLUG00000009808) #12	TROAP (ENSMLUG00000004347) #13	C1QL4 (ENSMLUG00000022468) #14	DNAJC22 (ENSMLUG00000004355) #15	ENSMLUG00000029142	SPATS2 (ENSMLUG00000016930) #16	KCNH3 (ENSMLUG00000016937) #17	MCRS1 (ENSMLUG00000016947) #18	FAM186B (ENSMLUG00000024363) #20	ENSMLUG00000029933	PRPF40B (ENSMLUG00000006364) #19	FMNL3 (ENSMLUG00000030360) #21	TMBIM6 (ENSMLUG00000006379) #22	NCKAP5L (ENSMLUG00000009825) #23	BCDIN3D (ENSMLUG00000009857) #24	FAIM2 (ENSMLUG00000009870) #25	AQP2 (ENSMLUG00000015943) #26	AQP6 (ENSMLUG00000023963) #28	RACGAP1 (ENSMLUG00000015945) #29	ASIC1 (ENSMLUG00000005096) #30	SMARCD1 (ENSMLUG00000005110) #31	GPD1 (ENSMLUG00000005119) #32	ENSMLUG00000005129 #33	CERS5 (ENSMLUG00000005134) #34	LIMA1 (ENSMLUG00000005140) #35	ENSMLUG00000012446	ENSMLUG00000015268 #36	ENSMLUG00000012513 #37
Greater horseshoe bat	MODERN SPECIES	1	DHH (ENSRFEG00010010213) #7	LMBR1L (ENSRFEG00010010270) #8	TUBA1B (ENSRFEG00010010426) #10	ENSRFEG00010010573 ##9	PRPH (ENSRFEG00010010768) #12	TROAP (ENSRFEG00010010867) #13	C1QL4 (ENSRFEG00010011031) #14	DNAJC22 (ENSRFEG00010011083) #15	SPATS2 (ENSRFEG00010011118) #16	ENSRFEG00010011174	KCNH3 (ENSRFEG00010011231) #17	MCRS1 (ENSRFEG00010011491) #18	FAM186B (ENSRFEG00010011681) #20	PRPF40B (ENSRFEG00010011898) #19	FMNL3 (ENSRFEG00010012912) #21	TMBIM6 (ENSRFEG00010013031) #22	NCKAP5L (ENSRFEG00010013134) #23	BCDIN3D (ENSRFEG00010013189) #24	FAIM2 (ENSRFEG00010013224) #25	ENSRFEG00010013273	AQP2 (ENSRFEG00010013297) #26	AQP5 (ENSRFEG00010013365) #27	AQP6 (ENSRFEG00010013397) #28	RACGAP1 (ENSRFEG00010013522) #29	ASIC1 (ENSRFEG00010013621) #30	SMARCD1 (ENSRFEG00010013850) #31	GPD1 (ENSRFEG00010014097) #32	COX14 (ENSRFEG00010014161) #33	CERS5 (ENSRFEG00010014190) #34	LIMA1 (ENSRFEG00010014283) #35	ENSRFEG00010014508 #36
Carnivora	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.b.b ##11	ENSGT00950000182825.A.a.b.a.b.a.a.b ##11	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000163376 #36
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b ##11	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Panthera	ANCESTRAL SPECIES		ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b ##11	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b ##11	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
leopard	MODERN SPECIES	77	DHH (ENSPPRG00000002928) #7	LMBR1L (ENSPPRG00000002507) #8	TUBA1B (ENSPPRG00000001738) #10	ENSPPRG00000000268 #10	ENSPPRG00000022793 ##11	PRPH (ENSPPRG00000022929) #12	TROAP (ENSPPRG00000023461) #13	C1QL4 (ENSPPRG00000014601) #14	DNAJC22 (ENSPPRG00000014249) #15	SPATS2 (ENSPPRG00000013612) #16	KCNH3 (ENSPPRG00000011760) #17	MCRS1 (ENSPPRG00000010951) #18	FAM186B (ENSPPRG00000010178) #20	PRPF40B (ENSPPRG00000009015) #19	FMNL3 (ENSPPRG00000008008) #21	TMBIM6 (ENSPPRG00000002717) #22	NCKAP5L (ENSPPRG00000001427) #23	BCDIN3D (ENSPPRG00000001284) #24	FAIM2 (ENSPPRG00000000833) #25	AQP2 (ENSPPRG00000023562) #26	AQP5 (ENSPPRG00000021657) #27	AQP6 (ENSPPRG00000021250) #28	RACGAP1 (ENSPPRG00000017428) #29	ASIC1 (ENSPPRG00000015855) #30	SMARCD1 (ENSPPRG00000012669) #31	GPD1 (ENSPPRG00000011319) #32	COX14 (ENSPPRG00000019209) ##33	CERS5 (ENSPPRG00000010100) #34	LIMA1 (ENSPPRG00000009365) #35	FAM186A (ENSPPRG00000007323) #36	LARP4 (ENSPPRG00000004522) #37
lion	MODERN SPECIES	7	TUBA1B (ENSPLOG00000011373) #10	ENSPLOG00000011430	TUBA1A (ENSPLOG00000011490) #11	ENSPLOG00000011582 #10	ENSPLOG00000011614 #10	PRPH (ENSPLOG00000011641) #12	TROAP (ENSPLOG00000011749) #13	C1QL4 (ENSPLOG00000011937) #14	DNAJC22 (ENSPLOG00000011978) #15	SPATS2 (ENSPLOG00000012021) #16	KCNH3 (ENSPLOG00000012091) #17	MCRS1 (ENSPLOG00000012252) #18	FAM186B (ENSPLOG00000012447) #20	PRPF40B (ENSPLOG00000012564) #19	FMNL3 (ENSPLOG00000013298) #21	TMBIM6 (ENSPLOG00000013481) #22	NCKAP5L (ENSPLOG00000013579) #23	BCDIN3D (ENSPLOG00000013629) #24	FAIM2 (ENSPLOG00000013662) #25	AQP2 (ENSPLOG00000013874) #26	AQP5 (ENSPLOG00000013935) #27	AQP6 (ENSPLOG00000014002) #28	RACGAP1 (ENSPLOG00000014124) #29	ASIC1 (ENSPLOG00000014271) #30	SMARCD1 (ENSPLOG00000014513) #31	GPD1 (ENSPLOG00000014692) #32	COX14 (ENSPLOG00000014840) ##33	CERS5 (ENSPLOG00000014870) #34	LIMA1 (ENSPLOG00000014948) #35	ENSPLOG00000015378	LARP4 (ENSPLOG00000015506) #37
Tiger	MODERN SPECIES	14	DHH (ENSPTIG00000020962) #7	LMBR1L (ENSPTIG00000002708) #8	ENSPTIG00000007278 #10	ENSPTIG00000016981 #10	ENSPTIG00000018218 ##11	PRPH (ENSPTIG00000019617) #12	TROAP (ENSPTIG00000021948) #13	C1QL4 (ENSPTIG00000001008) #14	DNAJC22 (ENSPTIG00000002783) #15	SPATS2 (ENSPTIG00000003615) #16	KCNH3 (ENSPTIG00000008317) #17	MCRS1 (ENSPTIG00000010460) #18	FAM186B (ENSPTIG00000012994) #20	PRPF40B (ENSPTIG00000014307) #19	FMNL3 (ENSPTIG00000020836) #21	TMBIM6 (ENSPTIG00000009490) #22	NCKAP5L (ENSPTIG00000011996) #23	BCDIN3D (ENSPTIG00000013513) #24	FAIM2 (ENSPTIG00000013680) #25	AQP2 (ENSPTIG00000014960) #26	AQP5 (ENSPTIG00000015805) #27	AQP6 (ENSPTIG00000016718) #28	RACGAP1 (ENSPTIG00000017779) #29	ASIC1 (ENSPTIG00000018928) #30	SMARCD1 (ENSPTIG00000020602) #31	GPD1 (ENSPTIG00000006962) #32	COX14 (ENSPTIG00000004070) ##33	CERS5 (ENSPTIG00000009121) #34	LIMA1 (ENSPTIG00000010537) #35	ENSPTIG00000012364	LARP4 (ENSPTIG00000015617) #37
Cat	MODERN SPECIES	238	RHEBL1 (ENSFCAG00000000096)	DHH (ENSFCAG00000043756) #7	LMBR1L (ENSFCAG00000000098) #8	TUBA1A (ENSFCAG00000038056) ##11	ENSFCAG00000014767	TUBA1C (ENSFCAG00000037882) #10	PRPH (ENSFCAG00000014769) #12	TROAP (ENSFCAG00000014772) #13	C1QL4 (ENSFCAG00000041475) #14	DNAJC22 (ENSFCAG00000027893) #15	KCNH3 (ENSFCAG00000014779) #17	MCRS1 (ENSFCAG00000025380) #18	FAM186B (ENSFCAG00000014783) #20	PRPF40B (ENSFCAG00000009451) #19	FMNL3 (ENSFCAG00000009452) #21	TMBIM6 (ENSFCAG00000009454) #22	NCKAP5L (ENSFCAG00000009455) #23	BCDIN3D (ENSFCAG00000009453) #24	FAIM2 (ENSFCAG00000009456) #25	AQP2 (ENSFCAG00000033645) #26	AQP5 (ENSFCAG00000009457) #27	AQP6 (ENSFCAG00000009458) #28	RACGAP1 (ENSFCAG00000009459) #29	ASIC1 (ENSFCAG00000009460) #30	SMARCD1 (ENSFCAG00000009461) #31	GPD1 (ENSFCAG00000009462) #32	ENSFCAG00000040163 ##33	CERS5 (ENSFCAG00000009464) #34	LIMA1 (ENSFCAG00000009465) #35	FAM186A (ENSFCAG00000030176)	LARP4 (ENSFCAG00000031897) #37
Caniformia	ANCESTRAL SPECIES	19	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b.h ##11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Canidae	ANCESTRAL SPECIES	8	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b.h ##11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.b.h ##11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37	ENSGT00950000182997.a.b.b.b
Dingo	DUPLICATION
Dingo	MODERN SPECIES	101	ENSCAFG00020015687 ##23	LYPD1 (ENSCAFG00020015684)	ENSCAFG00020015681	ENSCAFG00020015678	GPR39 (ENSCAFG00020015677)	ENSCAFG00020015676	SLC35F5 (ENSCAFG00020015641)	ENSCAFG00020015636	ACTR3 (ENSCAFG00020015635)	DPP10 (ENSCAFG00020014186)	DDX18 (ENSCAFG00020014114)	ENSCAFG00020014113	CCDC93 (ENSCAFG00020014106)	INSIG2 (ENSCAFG00020014102)	ENSCAFG00020014092	ENSCAFG00020014090 #22	EN1 (ENSCAFG00020014084)	MARCO (ENSCAFG00020014069)	C1QL2 (ENSCAFG00020014066)	STEAP3 (ENSCAFG00020014063)	C2orf76 (ENSCAFG00020014061)	ENSCAFG00020014059	TMEM37 (ENSCAFG00020014053)	SCTR (ENSCAFG00020014048)	ENSCAFG00020014045	ENSCAFG00020014038	TMEM177 (ENSCAFG00020014037)	PTPN4 (ENSCAFG00020013960)	EPB41L5 (ENSCAFG00020013791)	ENSCAFG00020013778	TMEM185B (ENSCAFG00020013775)
Dingo	MODERN SPECIES	329	LMBR1L (ENSCAFG00020013423) #8	TUBA1B (ENSCAFG00020013431) #10	TUBA1A (ENSCAFG00020013458) #11	ENSCAFG00020013474 ##11	ENSCAFG00020013475 #9	PRPH (ENSCAFG00020013478) #12	TROAP (ENSCAFG00020013484) #13	C1QL4 (ENSCAFG00020013495) #14	DNAJC22 (ENSCAFG00020013499) #15	SPATS2 (ENSCAFG00020013500) #16	KCNH3 (ENSCAFG00020013519) #17	MCRS1 (ENSCAFG00020013529) #18	FAM186B (ENSCAFG00020013533) #20	PRPF40B (ENSCAFG00020013555) #19	FMNL3 (ENSCAFG00020013736) #21	ENSCAFG00020014464 #22	NCKAP5L (ENSCAFG00020014476) #23	BCDIN3D (ENSCAFG00020014478) #24	FAIM2 (ENSCAFG00020014479) #25	AQP2 (ENSCAFG00020014482) #26	AQP5 (ENSCAFG00020014488) #27	AQP6 (ENSCAFG00020014490) #28	RACGAP1 (ENSCAFG00020014493) #29	ASIC1 (ENSCAFG00020014523) #30	SMARCD1 (ENSCAFG00020014530) #31	GPD1 (ENSCAFG00020014534) #32	CERS5 (ENSCAFG00020014536) #34	LIMA1 (ENSCAFG00020014537) #35	ENSCAFG00020014540	LARP4 (ENSCAFG00020014554) #37	DIP2B (ENSCAFG00020014761)
Dog	DUPLICATION
Dog	MODERN SPECIES	10	ENSCAFG00845006921	ENSCAFG00845006875	ENSCAFG00845006855	ENSCAFG00845006840	ENSCAFG00845006783	ENSCAFG00845006717	ENSCAFG00845006622	ENSCAFG00845006508	DPP10 (ENSCAFG00845006344)	ENSCAFG00845006094	DDX18 (ENSCAFG00845006065)	ENSCAFG00845006053	CCDC93 (ENSCAFG00845006007)	INSIG2 (ENSCAFG00845005970)	ENSCAFG00845005813	ENSCAFG00845005793 #22	EN1 (ENSCAFG00845029136)	MARCO (ENSCAFG00845029094)	C1QL2 (ENSCAFG00845028993)	STEAP3 (ENSCAFG00845028945)	C2orf76 (ENSCAFG00845028896)	DBI (ENSCAFG00845028816)	SCTR (ENSCAFG00845028750)	CFAP221 (ENSCAFG00845028563)	PTPN4 (ENSCAFG00845028291)	EPB41L5 (ENSCAFG00845027396)	TMEM185B (ENSCAFG00845027210)	RALB (ENSCAFG00845027115)	INHBB (ENSCAFG00845027084)	ENSCAFG00845027051	GLI2 (ENSCAFG00845026918)
Dog	MODERN SPECIES	19	RHEBL1 (ENSCAFG00845021547)	DHH (ENSCAFG00845021487) #7	LMBR1L (ENSCAFG00845021402) #8	TUBA1B (ENSCAFG00845021145) #10	ENSCAFG00845020819 ##9	PRPH (ENSCAFG00845020632) #12	ENSCAFG00845020455 #13	C1QL4 (ENSCAFG00845020396) #14	DNAJC22 (ENSCAFG00845020366) #15	SPATS2 (ENSCAFG00845020255) #16	KCNH3 (ENSCAFG00845020050) #17	MCRS1 (ENSCAFG00845019743) #18	FAM186B (ENSCAFG00845019610) #20	PRPF40B (ENSCAFG00845019354) #19	FMNL3 (ENSCAFG00845019002) #21	TMBIM6 (ENSCAFG00845018887) #22	NCKAP5L (ENSCAFG00845018746) #23	BCDIN3D (ENSCAFG00845018667) #24	FAIM2 (ENSCAFG00845018479) #25	AQP2 (ENSCAFG00845018399) #26	ENSCAFG00845018358 #28	AQP2 (ENSCAFG00845018235) #27	RACGAP1 (ENSCAFG00845017966) #29	ASIC1 (ENSCAFG00845017786) #30	SMARCD1 (ENSCAFG00845017536) #31	GPD1 (ENSCAFG00845017395) #32	CERS5 (ENSCAFG00845017240) #34	LIMA1 (ENSCAFG00845017111) #35	ENSCAFG00845017048	LARP4 (ENSCAFG00845016911) #37	DIP2B (ENSCAFG00845016416)
Red fox	MODERN SPECIES	32	DHH (ENSVVUG00000020895) #7	LMBR1L (ENSVVUG00000020897) #8	ENSVVUG00000020900 #10	ENSVVUG00000020903	ENSVVUG00000020906 ##9	PRPH (ENSVVUG00000020924) #12	TROAP (ENSVVUG00000020927) #13	C1QL4 (ENSVVUG00000020930) #14	DNAJC22 (ENSVVUG00000020931) #15	SPATS2 (ENSVVUG00000020935) #16	KCNH3 (ENSVVUG00000020962) #17	MCRS1 (ENSVVUG00000020978) #18	FAM186B (ENSVVUG00000021058) #20	PRPF40B (ENSVVUG00000021078) #19	FMNL3 (ENSVVUG00000021863) #21	TMBIM6 (ENSVVUG00000023288) #22	NCKAP5L (ENSVVUG00000023483) #23	BCDIN3D (ENSVVUG00000023486) #24	FAIM2 (ENSVVUG00000023489) #25	AQP2 (ENSVVUG00000023493) #26	AQP5 (ENSVVUG00000023496) #27	AQP6 (ENSVVUG00000023503) #28	RACGAP1 (ENSVVUG00000023514) #29	ASIC1 (ENSVVUG00000023704) #30	SMARCD1 (ENSVVUG00000023774) #31	GPD1 (ENSVVUG00000024551) #32	COX14 (ENSVVUG00000024554) ##33	CERS5 (ENSVVUG00000024561) #34	LIMA1 (ENSVVUG00000024665) #35	FAM186A (ENSVVUG00000024679) #36	LARP4 (ENSVVUG00000024717) #37
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00390000007809.a #8	ENSGT00940000154457.b #9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Mustelinae	ANCESTRAL SPECIES	33	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00940000154457.b #9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Ferret	MODERN SPECIES	450	DHH (ENSMPUG00000014623) #7	LMBR1L (ENSMPUG00000014618) #8	ENSMPUG00000014609 #9	ENSMPUG00000014608 #10	PRPH (ENSMPUG00000014605) #12	ENSMPUG00000014597	TROAP (ENSMPUG00000014593) #13	C1QL4 (ENSMPUG00000014592) #14	DNAJC22 (ENSMPUG00000014591) #15	SPATS2 (ENSMPUG00000014589) #16	KCNH3 (ENSMPUG00000014586) #17	MCRS1 (ENSMPUG00000014582) #18	FAM186B (ENSMPUG00000014580) #20	PRPF40B (ENSMPUG00000014578) #19	FMNL3 (ENSMPUG00000014569) #21	TMBIM6 (ENSMPUG00000014563) #22	NCKAP5L (ENSMPUG00000014558) #23	BCDIN3D (ENSMPUG00000014557) #24	FAIM2 (ENSMPUG00000014553) #25	AQP2 (ENSMPUG00000014526) #26	AQP5 (ENSMPUG00000014522) #27	AQP6 (ENSMPUG00000014513) #28	RACGAP1 (ENSMPUG00000014468) #29	ASIC1 (ENSMPUG00000014390) #30	SMARCD1 (ENSMPUG00000014386) #31	GPD1 (ENSMPUG00000014346) #32	CERS5 (ENSMPUG00000014284) #34	LIMA1 (ENSMPUG00000014253) #35
American mink	MODERN SPECIES	196	DHH (ENSNVIG00000006799) #7	LMBRL (ENSNVIG00000006723) #8	ENSNVIG00000006708 ##11	TUBA1A (ENSNVIG00000006688) #11	TUBA1C (ENSNVIG00000006678) #10	PRPH (ENSNVIG00000006650) #12	TROAP (ENSNVIG00000006570) #13	C1QL4 (ENSNVIG00000006551) #14	DJC22 (ENSNVIG00000006518) #15	SPATS2 (ENSNVIG00000006453) #16	KCNH3 (ENSNVIG00000006425) #17	MCRS1 (ENSNVIG00000006376) #18	FAM186B (ENSNVIG00000006347) #20	PRPF40B (ENSNVIG00000006296) #19	FMNL3 (ENSNVIG00000006209) #21	TMBIM6 (ENSNVIG00000006177) #22	NCKAP5L (ENSNVIG00000006126) #23	BCDIN3D (ENSNVIG00000006112) #24	FAIM2 (ENSNVIG00000006046) #25	AQP2 (ENSNVIG00000006033) #26	AQP5 (ENSNVIG00000006016) #27	ENSNVIG00000006008 #28	ENSNVIG00000006001 #28	RGAP1 (ENSNVIG00000005967) #29	ASIC1 (ENSNVIG00000005917) #30	SMARCD1 (ENSNVIG00000005856) #31	GPD1 (ENSNVIG00000005816) #32	COX14 (ENSNVIG00000005810) #33	CERS5 (ENSNVIG00000005793) #34	LIMA1 (ENSNVIG00000005697) #35	FAM186A (ENSNVIG00000005649) #36
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.`b #22
Giant Panda	DUPLICATION
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	971																ENSAMEG00000029630 #22
Giant Panda	MODERN SPECIES	857																ENSAMEG00000026072 #22	ENSAMEG00000024904
Giant Panda	MODERN SPECIES	2137																ENSAMEG00000023585 #22
Ursidae	ANCESTRAL SPECIES	36	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.a ##11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.ab #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b.h #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b.f #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Ursus	ANCESTRAL SPECIES	39	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.a ##11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.ab #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b.h #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b.f #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00940000163376 #36	ENSGT00940000154409 #37
Polar bear	MODERN SPECIES	262	DHH (ENSUMAG00000006584) #7	LMBR1L (ENSUMAG00000006589) #8	TUBA1B (ENSUMAG00000006597) #10	ENSUMAG00000006609	PRPH (ENSUMAG00000006611) #12	ENSUMAG00000006626	ENSUMAG00000006632 #13	ENSUMAG00000006639 #14	DNAJC22 (ENSUMAG00000006641) #15	SPATS2 (ENSUMAG00000006643) #16	KCNH3 (ENSUMAG00000006649) #17	MCRS1 (ENSUMAG00000006663) #18	FAM186B (ENSUMAG00000006667) #20	PRPF40B (ENSUMAG00000006690) #19	FMNL3 (ENSUMAG00000006945) #21	TMBIM6 (ENSUMAG00000007734) #22	NCKAP5L (ENSUMAG00000007780) #23	BCDIN3D (ENSUMAG00000007798) #24	FAIM2 (ENSUMAG00000007805) #25	AQP5 (ENSUMAG00000007811) #27	ENSUMAG00000007825 #28	RACGAP1 (ENSUMAG00000007836) #29	SMARCD1 (ENSUMAG00000007909) #31	GPD1 (ENSUMAG00000008431) #32	COX14 (ENSUMAG00000008436) #33	CERS5 (ENSUMAG00000008442) #34	LIMA1 (ENSUMAG00000008459) #35	ENSUMAG00000008467 #36	LARP4 (ENSUMAG00000008473) #37	DIP2B (ENSUMAG00000008478)	ATF1 (ENSUMAG00000008491)
American black bear	MODERN SPECIES	684															FMNL3 (ENSUAMG00000004034) #21	TMBIM6 (ENSUAMG00000005616) #22	NCKAP5L (ENSUAMG00000005620) #23	BCDIN3D (ENSUAMG00000005624) #24	FAIM2 (ENSUAMG00000005627) #25
Giant Panda	MODERN SPECIES	7	KMT2D (ENSAMEG00000006918)	RHEBL1 (ENSAMEG00000006903)	DHH (ENSAMEG00000006895) #7	LMBR1L (ENSAMEG00000006887) #8	TUBA1C (ENSAMEG00000025910) #10	PRPH (ENSAMEG00000000783) #12	TROAP (ENSAMEG00000000850) #13	C1QL4 (ENSAMEG00000030468) #14	DNAJC22 (ENSAMEG00000000876) #15	SPATS2 (ENSAMEG00000000881) #16	KCNH3 (ENSAMEG00000000899) #17	MCRS1 (ENSAMEG00000000936) #18	FAM186B (ENSAMEG00000000946) #20	PRPF40B (ENSAMEG00000000956) #19	FMNL3 (ENSAMEG00000000987) #21	TMBIM6 (ENSAMEG00000001004) #22	NCKAP5L (ENSAMEG00000025987) #23	BCDIN3D (ENSAMEG00000001025) #24	FAIM2 (ENSAMEG00000028783) #25	AQP2 (ENSAMEG00000001065) #26	AQP5 (ENSAMEG00000024235) #27	AQP6 (ENSAMEG00000001087) #28	RACGAP1 (ENSAMEG00000001093) #29	ASIC1 (ENSAMEG00000001129) #30	SMARCD1 (ENSAMEG00000001180) #31	GPD1 (ENSAMEG00000001211) #32	COX14 (ENSAMEG00000018818) #33	CERS5 (ENSAMEG00000001228) #34	LIMA1 (ENSAMEG00000001243) #35	ENSAMEG00000030556	ENSAMEG00000001271 #36
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT01090000263345	ENSGT00940000161557.b #27	ENSGT01070000257243	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34
Suina	ANCESTRAL SPECIES	21	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000154457.a.b ##9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT01090000263345	ENSGT00940000161557.b #27	ENSGT01070000257243	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35
Chacoan peccary	MODERN SPECIES	899	RHEBL1 (ENSCWAG00000019080)	DHH (ENSCWAG00000019060) #7	LMBR1L (ENSCWAG00000019023) #8	TUBA1C (ENSCWAG00000018842) #10	PRPH (ENSCWAG00000018787) #12	TROAP (ENSCWAG00000018696) #13	C1QL4 (ENSCWAG00000018661) #14	DNAJC22 (ENSCWAG00000018638) #15	SPATS2 (ENSCWAG00000018623) #16	KCNH3 (ENSCWAG00000018539) #17	MCRS1 (ENSCWAG00000018437) #18	ENSCWAG00000018423	FAM186B (ENSCWAG00000018406) #20	PRPF40B (ENSCWAG00000018262) #19	FMNL3 (ENSCWAG00000018187) #21	TMBIM6 (ENSCWAG00000018104) #22	NCKAP5L (ENSCWAG00000018044) #23	BCDIN3D (ENSCWAG00000018011) #24	FAIM2 (ENSCWAG00000017875) #25	AQP2 (ENSCWAG00000017838) #26	AQP5 (ENSCWAG00000017789) #27	AQP6 (ENSCWAG00000017761) #28	RACGAP1 (ENSCWAG00000017741) #29	ASIC1 (ENSCWAG00000017429) #30	SMARCD1 (ENSCWAG00000017243) #31	GPD1 (ENSCWAG00000017202) #32	COX14 (ENSCWAG00000017195) #33	CERS5 (ENSCWAG00000017116) #34	LIMA1 (ENSCWAG00000017030) #35	ENSCWAG00000016983 #36	LARP4 (ENSCWAG00000016605) #37
Pig	MODERN SPECIES	13	DHH (ENSSSCG00000000188) #7	LMBR1L (ENSSSCG00000000189) #8	TUBA1B (ENSSSCG00000000190) #10	ENSSSCG00000000194 ##9	TUBA1A (ENSSSCG00000061347) #11	PRPH (ENSSSCG00000000195) #12	TROAP (ENSSSCG00000023176) #13	C1QL4 (ENSSSCG00000000197) #14	DNAJC22 (ENSSSCG00000000198) #15	SPATS2 (ENSSSCG00000000199) #16	KCNH3 (ENSSSCG00000000203) #17	MCRS1 (ENSSSCG00000000202) #18	FAM186B (ENSSSCG00000000205) #20	PRPF40B (ENSSSCG00000000204) #19	FMNL3 (ENSSSCG00000025114) #21	TMBIM6 (ENSSSCG00000029652) #22	NCKAP5L (ENSSSCG00000000209) #23	BCDIN3D (ENSSSCG00000040144) #24	ENSSSCG00000000207	FAIM2 (ENSSSCG00000000206) #25	AQP2 (ENSSSCG00000021193) #26	ENSSSCG00000058738	AQP5 (ENSSSCG00000000211) #27	ENSSSCG00000062534	AQP6 (ENSSSCG00000000212) #28	ENSSSCG00000054254	RACGAP1 (ENSSSCG00000000217) #29	ASIC1 (ENSSSCG00000000216) #30	SMARCD1 (ENSSSCG00000000215) #31	GPD1 (ENSSSCG00000000214) #32	COX14 (ENSSSCG00000056361) #33
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730
Camelidae	ANCESTRAL SPECIES	27	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.b.b ##11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00940000154457.a.a.d ##9	ENSGT00950000182825.A.a.b.a.b.a.a.b ##11	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Arabian camel	MODERN SPECIES	3	DHH (ENSCDRG00005006364) #7	LMBR1L (ENSCDRG00005006301) #8	ENSCDRG00005006163 ##11	ENSCDRG00005006150 ##11	PRPH (ENSCDRG00005006126) #12	ENSCDRG00005006108	TROAP (ENSCDRG00005006077) #13	C1QL4 (ENSCDRG00005006050) #14	DNAJC22 (ENSCDRG00005006038) #15	SPATS2 (ENSCDRG00005005992) #16	KCNH3 (ENSCDRG00005005950) #17	MCRS1 (ENSCDRG00005005807) #18	FAM186B (ENSCDRG00005005785) #20	PRPF40B (ENSCDRG00005005701) #19	FMNL3 (ENSCDRG00005005419) #21	TMBIM6 (ENSCDRG00005005361) #22	NCKAP5L (ENSCDRG00005005281) #23	BCDIN3D (ENSCDRG00005005337) #24	FAIM2 (ENSCDRG00005005232) #25	AQP2 (ENSCDRG00005005216) #26	AQP5 (ENSCDRG00005005200) #27	AQP6 (ENSCDRG00005005193) #28	RACGAP1 (ENSCDRG00005005150) #29	ASIC1 (ENSCDRG00005005067) #30	SMARCD1 (ENSCDRG00005004856) #31	GPD1 (ENSCDRG00005004815) #32	ENSCDRG00005004803 #33	ENSCDRG00005004769 #34	ENSCDRG00005004744 #34	LIMA1 (ENSCDRG00005004688) #35	ENSCDRG00005004665
Alpaca	MODERN SPECIES	169													SPATS2 (ENSVPAG00000002324) #16	FAM186B (ENSVPAG00000002325) #20	ENSVPAG00000002326 #21	TMBIM6 (ENSVPAG00000002327) #22	BCDIN3D (ENSVPAG00000002328) #24
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730
Pecora	ANCESTRAL SPECIES	3	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730
Yarkand deer	MODERN SPECIES	22	RHEBL1 (ENSCHYG00000005073)	DHH (ENSCHYG00000005055) #7	LMBR1L (ENSCHYG00000003957) #8	ENSCHYG00000003953	TUBA1B (ENSCHYG00000003929) #10	PRPH (ENSCHYG00000003901) #12	TROAP (ENSCHYG00000003840) #13	C1QL4 (ENSCHYG00000003823) #14	DNAJC22 (ENSCHYG00000003816) #15	SPATS2 (ENSCHYG00000003787) #16	KCNH3 (ENSCHYG00000003766) #17	MCRS1 (ENSCHYG00000003691) #18	FAM186B (ENSCHYG00000003658) #20	ENSCHYG00000003405	FMNL3 (ENSCHYG00000003210) #21	TMBIM6 (ENSCHYG00000003153) #22	NCKAP5L (ENSCHYG00000003118) #23	BCDIN3D (ENSCHYG00000003105) #24	FAIM2 (ENSCHYG00000003080) #25	AQP2 (ENSCHYG00000003063) #26	AQP5 (ENSCHYG00000003046) #27	AQP6 (ENSCHYG00000003038) #28	RACGAP1 (ENSCHYG00000002976) #29	ASIC1 (ENSCHYG00000002925) #30	SMARCD1 (ENSCHYG00000002846) #31	GPD1 (ENSCHYG00000002811) #32	ENSCHYG00000002799 #33	CERS5 (ENSCHYG00000002775) #34	LIMA1 (ENSCHYG00000002754) #35	ENSCHYG00000002739	LARP4 (ENSCHYG00000002689) #37
Percora_a	ANCESTRAL SPECIES	3	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730
Siberian musk deer	MODERN SPECIES	320	ENSMMSG00000012207	ENSMMSG00000012225 ##11	ENSMMSG00000012233	ENSMMSG00000012239 #9	PRPH (ENSMMSG00000012252) #12	ENSMMSG00000012285	ENSMMSG00000012302 #13	C1QL4 (ENSMMSG00000012341) #14	DNAJC22 (ENSMMSG00000014980) #15	SPATS2 (ENSMMSG00000014998) #16	KCNH3 (ENSMMSG00000015035) #17	MCRS1 (ENSMMSG00000015080) #18	FAM186B (ENSMMSG00000015148) #20	PRPF40B (ENSMMSG00000015184) #19	FMNL3 (ENSMMSG00000015295) #21	TMBIM6 (ENSMMSG00000015448) #22	NCKAP5L (ENSMMSG00000015482) #23	BCDIN3D (ENSMMSG00000015515) #24	FAIM2 (ENSMMSG00000015530) #25	AQP2 (ENSMMSG00000015558) #26	AQP5 (ENSMMSG00000015578) #27	AQP6 (ENSMMSG00000015598) #28	RACGAP1 (ENSMMSG00000015616) #29	ASIC1 (ENSMMSG00000015664) #30	SMARCD1 (ENSMMSG00000015795) #31	GPD1 (ENSMMSG00000015936) #32	ENSMMSG00000016024 #33	CERS5 (ENSMMSG00000016047) #34	LIMA1 (ENSMMSG00000016083) #35	ENSMMSG00000016161	ENSMMSG00000016204 #37
Bovidae	DUPLICATION
Bovidae	DUPLICATION
Bovidae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.bb.a #22
Bovinae	ANCESTRAL SPECIES		ENSGT00940000160142	ENSGT01030000234667.a.a.a.a.b	ENSGT00390000003628.b	ENSGT00940000164415	ENSGT00940000159655	ENSGT00940000161783	ENSGT00940000161994	ENSGT00940000161950	ENSGT00940000161982	ENSGT00940000162192	ENSGT00940000160849	ENSGT00940000159382	ENSGT00940000161855	ENSGT00940000161077	ENSGT00940000162203	ENSGT01050000244940.a.a.bb.a #22	ENSGT00940000161968	ENSGT00390000001157.C.jc	ENSGT00390000001157.B	ENSGT00940000160295.v	ENSGT00940000160443.d	ENSGT00940000160295.u	ENSGT00940000160443.c.a	ENSGT00940000160443.c.b	ENSGT00940000162736.i	ENSGT00940000155433	ENSGT00940000159486.`b.a.a.b.b	ENSGT00940000164263	ENSGT00940000163416.p.a.b	ENSGT00940000163416.o.a.b.b.a	ENSGT00940000163416.p.b.b.b
Bos	ANCESTRAL SPECIES	1	ENSGT00940000159647	ENSGT00940000160142	ENSGT01030000234667.a.a.a.a.b	ENSGT00390000003628.b	ENSGT00940000159655	ENSGT00940000161783	ENSGT00940000161994	ENSGT00940000161950	ENSGT00940000161982	ENSGT00940000162192	ENSGT00940000160849	ENSGT00940000159382	ENSGT00940000161855	ENSGT00940000161077	ENSGT00940000162203	ENSGT01050000244940.a.a.bb.a #22	ENSGT00940000161968	ENSGT00390000001157.C.jc.i.a	ENSGT00390000001157.C.jc.j	ENSGT00940000160295.v	ENSGT00940000160443.d	ENSGT00940000160443.c.a	ENSGT00940000160443.c.b	ENSGT00940000162736.i	ENSGT00940000160295.u	ENSGT00940000155433	ENSGT00940000159486.`b.a.a.b.b.c.a.b	ENSGT00940000164263	ENSGT00940000163416.p.a.b	ENSGT00940000163416.p.b.b.b.c.b	ENSGT00940000163658.f
Bos_a	ANCESTRAL SPECIES		ENSGT00940000159647	ENSGT00940000160142	ENSGT01030000234667.a.a.a.a.b	ENSGT00390000003628.b	ENSGT00940000159655	ENSGT00940000161783	ENSGT00940000161994	ENSGT00940000161950	ENSGT00940000161982	ENSGT00940000162192	ENSGT00940000160849	ENSGT00940000159382	ENSGT00940000161855	ENSGT00940000161077	ENSGT00940000162203	ENSGT01050000244940.a.a.bb.a #22	ENSGT00940000161968	ENSGT00390000001157.C.jc.i.a	ENSGT00390000001157.C.jc.i.b	ENSGT00390000001157.B	ENSGT00940000160295.v	ENSGT00940000160443.d	ENSGT00940000160443.c.a	ENSGT00940000160443.c.b	ENSGT00940000162736.i.b	ENSGT00940000159486.`b.a.a.b.b.d	ENSGT00940000159486.`b.a.a.b.b.c.b	ENSGT00940000163416.o.a.b.b.b	ENSGT00940000163416.p.b.b.a.b	ENSGT00940000163416.p.b.b.a.a	ENSGT00940000163416.p.b.b.b.c.b
Wild yak	MODERN SPECIES	1109							ENSBMUG00000007508	KRT26 (ENSBMUG00000007503)	KRT27 (ENSBMUG00000007494)	KRT28 (ENSBMUG00000007482)	KRT10 (ENSBMUG00000007473)	KRT12 (ENSBMUG00000007467)	KRT20 (ENSBMUG00000007456)	KRT23 (ENSBMUG00000007436)	KRT39 (ENSBMUG00000007430)	ENSBMUG00000007422 #22	KRT40 (ENSBMUG00000007416)	ENSBMUG00000007403	ENSBMUG00000007396	ENSBMUG00000007393	ENSBMUG00000007389	ENSBMUG00000007379	ENSBMUG00000007360	ENSBMUG00000007333	ENSBMUG00000007321	ENSBMUG00000007315	ENSBMUG00000007308	ENSBMUG00000007255	KRTAP4-1 (ENSBMUG00000007244)	ENSBMUG00000007229
American bison	MODERN SPECIES	3101	TNS4 (ENSBBBG00000024883)	CCR7 (ENSBBBG00000024903)	SMARCE1 (ENSBBBG00000024947)	ENSBBBG00000007827	KRT222 (ENSBBBG00000024971)	KRT24 (ENSBBBG00000024991)	KRT25 (ENSBBBG00000025011)	KRT26 (ENSBBBG00000006612)	KRT27 (ENSBBBG00000025042)	KRT28 (ENSBBBG00000007843)	KRT10 (ENSBBBG00000006646)	KRT12 (ENSBBBG00000025119)	KRT20 (ENSBBBG00000025144)	KRT23 (ENSBBBG00000025161)	KRT39 (ENSBBBG00000006669)	ENSBBBG00000025197 #22	KRT40 (ENSBBBG00000025230)	ENSBBBG00000025235	ENSBBBG00000008086	ENSBBBG00000025241	ENSBBBG00000025245	ENSBBBG00000006688	ENSBBBG00000010112	ENSBBBG00000010115	ENSBBBG00000010119	ENSBBBG00000010122	ENSBBBG00000010127	ENSBBBG00000010130	ENSBBBG00000001711	ENSBBBG00000010134	ENSBBBG00000010136
Caprinae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.bb.a #22
Rambouillet Sheep	MODERN SPECIES	19	LMBR1L (ENSOARG00020001056) #8	ENSOARG00020001038 #10	TUBA1A (ENSOARG00020000988) #11	TUBA1C (ENSOARG00020000944) #10	ENSOARG00020000929 ##9	PRPH (ENSOARG00020000909) #12	TROAP (ENSOARG00020000841) #13	C1QL4 (ENSOARG00020000814) #14	DNAJC22 (ENSOARG00020000805) #15	ENSOARG00020000793 #16	KCNH3 (ENSOARG00020000757) #17	MCRS1 (ENSOARG00020000707) #18	FAM186B (ENSOARG00020000686) #20	PRPF40B (ENSOARG00020000603) #19	FMNL3 (ENSOARG00020000387) #21	ENSOARG00020000307 #22	NCKAP5L (ENSOARG00020000181) #23	BCDIN3D (ENSOARG00020023998) #24	FAIM2 (ENSOARG00020023956) #25	AQP2 (ENSOARG00020023932) #26	AQP5 (ENSOARG00020023923) #27	AQP6 (ENSOARG00020023881) #28	RACGAP1 (ENSOARG00020023860) #29	ASIC1 (ENSOARG00020023731) #30	SMARCD1 (ENSOARG00020023519) #31	GPD1 (ENSOARG00020023447) #32	COX14 (ENSOARG00020023432) #33	ENSOARG00020023406 #34	LIMA1 (ENSOARG00020023296) #35	ENSOARG00020023263	ENSOARG00020023257
Bovidae	ANCESTRAL SPECIES	3	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.g #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730
Bovinae	ANCESTRAL SPECIES	17	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #10	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.g.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Bos	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #10	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.g.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Bos_a	ANCESTRAL SPECIES	3	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.a.a ##11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #10	ENSGT00940000160203 #12	ENSGT00950000185831	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.g.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Wild yak	MODERN SPECIES	811	ENSBMUG00000023231	ENSBMUG00000023265 ##11	ENSBMUG00000023293 #10	ENSBMUG00000023299 #10	PRPH (ENSBMUG00000023309) #12	ENSBMUG00000023317	ENSBMUG00000023324 #13	C1QL4 (ENSBMUG00000023330) #14	DNAJC22 (ENSBMUG00000023341) #15	SPATS2 (ENSBMUG00000023357) #16	KCNH3 (ENSBMUG00000023375) #17	MCRS1 (ENSBMUG00000023401) #18	FAM186B (ENSBMUG00000023416) #20	PRPF40B (ENSBMUG00000023428) #19	FMNL3 (ENSBMUG00000023535) #21	ENSBMUG00000023595 #22	NCKAP5L (ENSBMUG00000023615) #23	BCDIN3D (ENSBMUG00000023628) #24	FAIM2 (ENSBMUG00000023660) #25	AQP2 (ENSBMUG00000023679) #26	AQP5 (ENSBMUG00000023686) #27	AQP6 (ENSBMUG00000023717) #28	RACGAP1 (ENSBMUG00000023754) #29	ENSBMUG00000023773 #30
Bos_b	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec #10	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.a #10	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.g.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37	ENSGT00950000182997.a.b.b.b
Cow	MODERN SPECIES	24	TUBA1B (ENSBTAG00000012244) #10	ENSBTAG00000052201	TUBA1A (ENSBTAG00000001489) #11	TUBA1C (ENSBTAG00000039992) #10	ENSBTAG00000037775 #10	PRPH (ENSBTAG00000017864) #12	TROAP (ENSBTAG00000008499) #13	C1QL4 (ENSBTAG00000032567) #14	DNAJC22 (ENSBTAG00000016398) #15	SPATS2 (ENSBTAG00000004660) #16	KCNH3 (ENSBTAG00000019277) #17	MCRS1 (ENSBTAG00000019281) #18	FAM186B (ENSBTAG00000019283) #20	PRPF40B (ENSBTAG00000016589) #19	FMNL3 (ENSBTAG00000016593) #21	TMBIM6 (ENSBTAG00000018588) #22	NCKAP5L (ENSBTAG00000004851) #23	BCDIN3D (ENSBTAG00000017781) #24	FAIM2 (ENSBTAG00000017504) #25	AQP2 (ENSBTAG00000008374) #26	AQP5 (ENSBTAG00000026813) #28	RACGAP1 (ENSBTAG00000012784) #29	ASIC1 (ENSBTAG00000000970) #30	SMARCD1 (ENSBTAG00000037935) #31	GPD1 (ENSBTAG00000016296) #32	COX14 (ENSBTAG00000000808) #33	CERS5 (ENSBTAG00000017395) #34	LIMA1 (ENSBTAG00000012342) #35	FAM186A (ENSBTAG00000023546)	LARP4 (ENSBTAG00000017164) #37	ENSBTAG00000032790
American bison	MODERN SPECIES	3297	DHH (ENSBBBG00000023379) #7	LMBR1L (ENSBBBG00000006114) #8	TUBA1B (ENSBBBG00000023348) #10	ENSBBBG00000023336	TUBA1A (ENSBBBG00000007243) #11	ENSBBBG00000023318	ENSBBBG00000006097 #13	C1QL4 (ENSBBBG00000023297) #14	DNAJC22 (ENSBBBG00000023287) #15	SPATS2 (ENSBBBG00000006090) #16	KCNH3 (ENSBBBG00000023233) #17	MCRS1 (ENSBBBG00000023218) #18	FAM186B (ENSBBBG00000000327) #20	PRPF40B (ENSBBBG00000000351) #19	FMNL3 (ENSBBBG00000000454) #21	ENSBBBG00000023098 #22	NCKAP5L (ENSBBBG00000023063) #23	BCDIN3D (ENSBBBG00000023040) #24	FAIM2 (ENSBBBG00000006042) #25	AQP2 (ENSBBBG00000023008) #26	AQP5 (ENSBBBG00000007531) #27	AQP6 (ENSBBBG00000022994) #28	RACGAP1 (ENSBBBG00000022976) #29	ASIC1 (ENSBBBG00000022870) #30	SMARCD1 (ENSBBBG00000022825) #31	GPD1 (ENSBBBG00000005992) #32	ENSBBBG00000022762 #33	CERS5 (ENSBBBG00000022759) #34	LIMA1 (ENSBBBG00000022743) #35	ENSBBBG00000005973	LARP4 (ENSBBBG00000022641) #37
Caprinae	ANCESTRAL SPECIES		ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b #11	ENSGT00940000154457.a.b ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a.h.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a.bb.b #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00910000147121	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.b #33	ENSGT01030000234515.a.a.a.c #34	ENSGT00940000158313 #35	ENSGT00990000203730
Goat	MODERN SPECIES	24	TUBA1B (ENSCHIG00000018025) #10	TUBA1A (ENSCHIG00000022988) #11	ENSCHIG00000025067 ##9	ENSCHIG00000019237 ##9	PRPH (ENSCHIG00000011830) #12	ENSCHIG00000027060	TROAP (ENSCHIG00000011079) #13	C1QL4 (ENSCHIG00000012773) #14	DNAJC22 (ENSCHIG00000021631) #15	ENSCHIG00000026771 #16	KCNH3 (ENSCHIG00000013580) #17	MCRS1 (ENSCHIG00000019172) #18	FAM186B (ENSCHIG00000024871) #20	PRPF40B (ENSCHIG00000024014) #19	FMNL3 (ENSCHIG00000015654) #21	TMBIM6 (ENSCHIG00000001154) #22	NCKAP5L (ENSCHIG00000027024) #23	BCDIN3D (ENSCHIG00000014358) #24	FAIM2 (ENSCHIG00000019021) #25	AQP2 (ENSCHIG00000024043) #26	AQP5 (ENSCHIG00000009412) #27	AQP6 (ENSCHIG00000013540) #28	RACGAP1 (ENSCHIG00000009875) #29	ASIC1 (ENSCHIG00000026006) #30	ENSCHIG00000008241	SMARCD1 (ENSCHIG00000016287) #31	GPD1 (ENSCHIG00000020256) #32	COX14 (ENSCHIG00000007195) #33	ENSCHIG00000010672 #34	LIMA1 (ENSCHIG00000026369) #35	ENSCHIG00000020047
Bovidae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Caprinae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Rambouillet Sheep	MODERN SPECIES	2	IGFBP4 (ENSOARG00020007791)	TNS4 (ENSOARG00020007745)	CCR7 (ENSOARG00020007720)	SMARCE1 (ENSOARG00020007516)	KRT222 (ENSOARG00020007428)	KRT24 (ENSOARG00020007351)	KRT25 (ENSOARG00020007286)	KRT26 (ENSOARG00020007244)	KRT27 (ENSOARG00020007155)	KRT28 (ENSOARG00020007049)	KRT10 (ENSOARG00020006954)	KRT12 (ENSOARG00020006858)	KRT20 (ENSOARG00020006793)	KRT23 (ENSOARG00020006727)	KRT39 (ENSOARG00020006647)	ENSOARG00020006570 #22	KRT40 (ENSOARG00020006496)	BIIIB4 (ENSOARG00020006476)	ENSOARG00020006457	ENSOARG00020006438	KAP3.2 (ENSOARG00020006425)	KRTAP1-3 (ENSOARG00020006325)	KRTAP1-1 (ENSOARG00020006263)	ENSOARG00020006246	ENSOARG00020006235	ENSOARG00020006222	ENSOARG00020006213	ENSOARG00020006204	ENSOARG00020006171	ENSOARG00020006163	ENSOARG00020006135
Bovinae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Bos	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Bos_a	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Domestic yak	MODERN SPECIES	24	LMBR1L (ENSBGRG00000001347) #8	TUBA1B (ENSBGRG00000001452) #10	ENSBGRG00000001508	ENSBGRG00000001514	TUBA1C (ENSBGRG00000001528) #10	PRPH (ENSBGRG00000001572) #12	TROAP (ENSBGRG00000001616) #13	C1QL4 (ENSBGRG00000001682) #14	DNAJC22 (ENSBGRG00000001696) #15	SPATS2 (ENSBGRG00000001721) #16	KCNH3 (ENSBGRG00000001752) #17	MCRS1 (ENSBGRG00000001780) #18	FAM186B (ENSBGRG00000001837) #20	PRPF40B (ENSBGRG00000001878) #19	FMNL3 (ENSBGRG00000002044) #21	TMBIM6 (ENSBGRG00000002428) #22	NCKAP5L (ENSBGRG00000002464) #23	BCDIN3D (ENSBGRG00000002571) #24	FAIM2 (ENSBGRG00000002579) #25	AQP2 (ENSBGRG00000002620) #26	AQP5 (ENSBGRG00000002644) #27	AQP6 (ENSBGRG00000002662) #28	RACGAP1 (ENSBGRG00000002692) #29	ASIC1 (ENSBGRG00000002768) #30	SMARCD1 (ENSBGRG00000002849) #31	GPD1 (ENSBGRG00000002916) #32	COX14 (ENSBGRG00000002947) #33	CERS5 (ENSBGRG00000002954) #34	LIMA1 (ENSBGRG00000002970) #35	ENSBGRG00000003038	LARP4 (ENSBGRG00000003121) #37
Bos_b	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.cb #22
Hybrid Bos Indicus	MODERN SPECIES	24	LMBR1L (ENSBIXG00005019839) #8	ENSBIXG00005019748 #9	ENSBIXG00005003208	ENSBIXG00005019629 #10	ENSBIXG00005019597 #10	PRPH (ENSBIXG00005003191) #12	TROAP (ENSBIXG00005019486) #13	C1QL4 (ENSBIXG00005019453) #14	DNAJC22 (ENSBIXG00005019439) #15	ENSBIXG00005003162 #16	KCNH3 (ENSBIXG00005019387) #17	MCRS1 (ENSBIXG00005019376) #18	FAM186B (ENSBIXG00005006144) #20	PRPF40B (ENSBIXG00005019251) #19	FMNL3 (ENSBIXG00005019046) #21	TMBIM6 (ENSBIXG00005003088) #22	NCKAP5L (ENSBIXG00005018903) #23	BCDIN3D (ENSBIXG00005003070) #24	FAIM2 (ENSBIXG00005018825) #25	AQP2 (ENSBIXG00005003048) #26	ENSBIXG00005003033 #28	RACGAP1 (ENSBIXG00005006244) #29	ASIC1 (ENSBIXG00005018518) #30	SMARCD1 (ENSBIXG00005002988) #31	GPD1 (ENSBIXG00005018431) #32	ENSBIXG00005018391 #33	CERS5 (ENSBIXG00005018345) #34	LIMA1 (ENSBIXG00005018314) #35	ENSBIXG00005018258	LARP4 (ENSBIXG00005018243) #37	DIP2B (ENSBIXG00005018135)
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #10	ENSGT00940000154457.a.a.c.a ##9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b #10	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Blue whale	MODERN SPECIES	1	LMBR1L (ENSBMSG00010017366) #8	ENSBMSG00010017482 ##11	ENSBMSG00010017570	TUBA1C (ENSBMSG00010017602) #10	PRPH (ENSBMSG00010017649) #12	TROAP (ENSBMSG00010017715) #13	C1QL4 (ENSBMSG00010017749) #14	SPATS2 (ENSBMSG00010017793) #16	ENSBMSG00010017850	ENSBMSG00010017857	KCNH3 (ENSBMSG00010017898) #17	MCRS1 (ENSBMSG00010017976) #18	FAM186B (ENSBMSG00010018089) #20	PRPF40B (ENSBMSG00010018142) #19	FMNL3 (ENSBMSG00010018480) #21	TMBIM6 (ENSBMSG00010018550) #22	NCKAP5L (ENSBMSG00010018586) #23	BCDIN3D (ENSBMSG00010018604) #24	FAIM2 (ENSBMSG00010018618) #25	AQP2 (ENSBMSG00010018640) #26	AQP5 (ENSBMSG00010018670) #27	AQP6 (ENSBMSG00010018692) #28	RACGAP1 (ENSBMSG00010018749) #29	ASIC1 (ENSBMSG00010018805) #30	ENSBMSG00010018920 #31	GPD1 (ENSBMSG00010019000) #32	ENSBMSG00010019052 ##33	ENSBMSG00010019082 #34	ENSBMSG00010019117 #34	ENSBMSG00010019154 #35	ENSBMSG00010019191 #36
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #10	ENSGT00940000154457.a.a.c.a ##9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b #10	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00730000111429.b	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #10	ENSGT00940000154457.a.a.c.a ##9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b #10	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00730000111429.b	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Dolphin	MODERN SPECIES	635																TMBIM6 (ENSTTRG00000000999) #22	NCKAP5L (ENSTTRG00000001000) #23	ENSTTRG00000021406 #23	BCDIN3D (ENSTTRG00000001001) #24	FAIM2 (ENSTTRG00000001002) #25	AQP2 (ENSTTRG00000001003) #26	AQP5 (ENSTTRG00000001004) #27	AQP6 (ENSTTRG00000001005) #28	RACGAP1 (ENSTTRG00000001006) #29	ASIC1 (ENSTTRG00000001008) #30	SMARCD1 (ENSTTRG00000001010) #31	GPD1 (ENSTTRG00000001012) #32	CERS5 (ENSTTRG00000001014) #34	LIMA1 (ENSTTRG00000001015) #35
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #10	ENSGT00900000143450	ENSGT00940000154457.a.a.c.a ##9	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00730000111429.b	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Vaquita	MODERN SPECIES	1	LMBR1L (ENSPSNG00000011226) #8	TUBA1B (ENSPSNG00000011161) #10	KLHL8 (ENSPSNG00000011123)	TUBA1A (ENSPSNG00000010994) #11	ENSPSNG00000010933 ##9	PRPH (ENSPSNG00000010814) #12	TROAP (ENSPSNG00000010746) #13	C1QL4 (ENSPSNG00000010701) #14	ENSPSNG00000010655	SPATS2 (ENSPSNG00000010631) #16	KCNH3 (ENSPSNG00000010468) #17	MCRS1 (ENSPSNG00000010283) #18	FAM186B (ENSPSNG00000010181) #20	PRPF40B (ENSPSNG00000009876) #19	FMNL3 (ENSPSNG00000009775) #21	TMBIM6 (ENSPSNG00000009712) #22	ENSPSNG00000011171	NCKAP5L (ENSPSNG00000011101) #23	BCDIN3D (ENSPSNG00000011042) #24	FAIM2 (ENSPSNG00000010923) #25	AQP2 (ENSPSNG00000010847) #26	AQP5 (ENSPSNG00000010789) #27	AQP6 (ENSPSNG00000010729) #28	ENSPSNG00000010688	RACGAP1 (ENSPSNG00000010669) #29	ASIC1 (ENSPSNG00000010445) #30	SMARCD1 (ENSPSNG00000010298) #31	GPD1 (ENSPSNG00000010118) #32	CERS5 (ENSPSNG00000009960) #34	LIMA1 (ENSPSNG00000009785) #35	LARP4 (ENSPSNG00000009414) #37
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000161132 #7	ENSGT00390000007809.a #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc #10	ENSGT00900000143450	ENSGT00940000154457.a.a.c.a ##9	ENSGT01010000229521	ENSGT00940000160203 #12	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #20	ENSGT00930000150980.b #19	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00940000156629 #31	ENSGT00390000003114.e.a #32	ENSGT00390000002190.a.b ##33	ENSGT01030000234515.a.a.a #34	ENSGT00940000158313 #35	ENSGT00990000203730	ENSGT00940000154409 #37
Narwhal	MODERN SPECIES	313	DHH (ENSMMNG00015021606) #7	LMBR1L (ENSMMNG00015021626) #8	TUBA1B (ENSMMNG00015021671) #10	ENSMMNG00015021709	ENSMMNG00015021713	ENSMMNG00015021728 ##9	ENSMMNG00015021733	PRPH (ENSMMNG00015013461) #12	TROAP (ENSMMNG00015013490) #13	C1QL4 (ENSMMNG00015013515) #14	SPATS2 (ENSMMNG00015013537) #16	KCNH3 (ENSMMNG00015013644) #17	MCRS1 (ENSMMNG00015013696) #18	PRPF40B (ENSMMNG00015013762) #19	FMNL3 (ENSMMNG00015013853) #21	TMBIM6 (ENSMMNG00015013952) #22	NCKAP5L (ENSMMNG00015013977) #23	BCDIN3D (ENSMMNG00015013997) #24	FAIM2 (ENSMMNG00015014009) #25	AQP2 (ENSMMNG00015014027) #26	AQP5 (ENSMMNG00015014040) #27	AQP6 (ENSMMNG00015014051) #28	RACGAP1 (ENSMMNG00015014069) #29	ASIC1 (ENSMMNG00015014101) #30	ENSMMNG00015014146 #31	GPD1 (ENSMMNG00015014170) #32	ENSMMNG00015014177 ##33	CERS5 (ENSMMNG00015014184) #34	LIMA1 (ENSMMNG00015014204) #35	ENSMMNG00015014228	LARP4 (ENSMMNG00015014255) #37
Beluga whale	MODERN SPECIES	39	LMBR1L (ENSDLEG00000005547) #8	ENSDLEG00000005539	ENSDLEG00000005535	ENSDLEG00000005525 #10	ENSDLEG00000005507 ##9	ENSDLEG00000005499	PRPH (ENSDLEG00000005489) #12	TROAP (ENSDLEG00000005478) #13	C1QL4 (ENSDLEG00000005472) #14	SPATS2 (ENSDLEG00000016468) #16	KCNH3 (ENSDLEG00000016437) #17	MCRS1 (ENSDLEG00000016407) #18	FAM186B (ENSDLEG00000016369) #20	PRPF40B (ENSDLEG00000016312) #19	FMNL3 (ENSDLEG00000016175) #21	TMBIM6 (ENSDLEG00000016148) #22	NCKAP5L (ENSDLEG00000016120) #23	BCDIN3D (ENSDLEG00000016113) #24	FAIM2 (ENSDLEG00000016092) #25	AQP2 (ENSDLEG00000016070) #26	AQP5 (ENSDLEG00000016064) #27	AQP6 (ENSDLEG00000016053) #28	RACGAP1 (ENSDLEG00000016029) #29	ASIC1 (ENSDLEG00000015917) #30	SMARCD1 (ENSDLEG00000015671) #31	GPD1 (ENSDLEG00000015629) #32	ENSDLEG00000015620 ##33	CERS5 (ENSDLEG00000015590) #34	LIMA1 (ENSDLEG00000015569) #35	ENSDLEG00000015550	LARP4 (ENSDLEG00000015261) #37
Sperm whale	MODERN SPECIES	17	RHEBL1 (ENSPCTG00005008730)	DHH (ENSPCTG00005008692) #7	LMBR1L (ENSPCTG00005008612) #8	ENSPCTG00005008583	ENSPCTG00005008557	TUBA1B (ENSPCTG00005008408) #10	TROAP (ENSPCTG00005008366) #13	C1QL4 (ENSPCTG00005008336) #14	ENSPCTG00005008318	SPATS2 (ENSPCTG00005008268) #16	KCNH3 (ENSPCTG00005008212) #17	MCRS1 (ENSPCTG00005008165) #18	ENSPCTG00005008137	PRPF40B (ENSPCTG00005007929) #19	ENSPCTG00005007869 #21	TMBIM6 (ENSPCTG00005007808) #22	ENSPCTG00005007783 #30	RACGAP1 (ENSPCTG00005007703) #29	AQP6 (ENSPCTG00005007667) #28	AQP5 (ENSPCTG00005007658) #27	AQP2 (ENSPCTG00005007639) #26	FAIM2 (ENSPCTG00005007571) #25	BCDIN3D (ENSPCTG00005007543) #24	LIMA1 (ENSPCTG00005007407) #35	ENSPCTG00005007353	LARP4 (ENSPCTG00005007174) #37	DIP2B (ENSPCTG00005006865)	ENSPCTG00005006806	TMPRSS12 (ENSPCTG00005006754)	ENSPCTG00005006742	HIGD1C (ENSPCTG00005018312)