Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Glires	ANCESTRAL SPECIES	4	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Rodentia	ANCESTRAL SPECIES	5	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT01090000263345	ENSGT00940000161557.b #32	ENSGT01070000257243	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00860000135898 #37	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00860000135898 #37	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT01100000263763	ENSGT00940000154409
Hystricomorpha_b	ANCESTRAL SPECIES	53											ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00860000135898 #37	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT01100000263763	ENSGT00940000154409
Degu	MODERN SPECIES	134	HPS3 (ENSODEG00000009955) #7	ENSODEG00000010130 #8	ENSODEG00000010432 #9	ENSODEG00000009993 #10	MYLK3 (ENSODEG00000010367) #11	ENSODEG00000010804 #12	ENSODEG00000010211 #13	ENSODEG00000012398 #14	ENSODEG00000011171 #15	KCNH3 (ENSODEG00000010379) #16	MCRS1 (ENSODEG00000010219) #17	ENSODEG00000010921 #18	ENSODEG00000010201 #19	FMNL3 (ENSODEG00000011056) #20	ENSODEG00000010356 #21	TMBIM6 (ENSODEG00000009820) #22	ENSODEG00000019759 #23	NCKAP5L (ENSODEG00000009975) #24	BCDIN3D (ENSODEG00000009705) #25	ENSODEG00000019768 #26	ENSODEG00000010974 #27	ENSODEG00000011097 #28	FAIM2 (ENSODEG00000009571) #29	ENSODEG00000012970 #30	AQP2 (ENSODEG00000010450) #31	AQP5 (ENSODEG00000011095) #32	AQP6 (ENSODEG00000009870) #33	RACGAP1 (ENSODEG00000010159) #34	ASIC1 (ENSODEG00000009913) #35	SMARCD1 (ENSODEG00000010234) #36	ENSODEG00000010634 #37
Long-tailed chinchilla	MODERN SPECIES	254										KCNH3 (ENSCLAG00000001325) #16	MCRS1 (ENSCLAG00000001468) #17	FAM186B (ENSCLAG00000001623)	PRPF40B (ENSCLAG00000001663) #18	FMNL3 (ENSCLAG00000000779) #20	ENSCLAG00000001174	TMBIM6 (ENSCLAG00000001272) #22	NCKAP5L (ENSCLAG00000000530) #24	BCDIN3D (ENSCLAG00000000912) #25	FAIM2 (ENSCLAG00000000961) #29	ENSCLAG00000017426	AQP2 (ENSCLAG00000000834) #31	AQP5 (ENSCLAG00000000883) #32	AQP6 (ENSCLAG00000001011) #33	RACGAP1 (ENSCLAG00000001084) #34	ASIC1 (ENSCLAG00000000832) #35	SMARCD1 (ENSCLAG00000000946) #36	ENSCLAG00000001015 #37	GPD1 (ENSCLAG00000001367)	CERS5 (ENSCLAG00000001516)	LIMA1 (ENSCLAG00000000738)	ENSCLAG00000001798
Guinea pig	MODERN SPECIES	9	KMT2D (ENSCPOG00000002973)	RHEBL1 (ENSCPOG00000002998)	DHH (ENSCPOG00000002257)	LMBR1L (ENSCPOG00000002999)	TUBA1B (ENSCPOG00000039484)	ENSCPOG00000031519 ##14	PRPH (ENSCPOG00000014881)	TROAP (ENSCPOG00000014679)	C1QL4 (ENSCPOG00000020682)	SPATS2 (ENSCPOG00000009858)	KCNH3 (ENSCPOG00000011165) #16	MCRS1 (ENSCPOG00000011172) #17	FAM186B (ENSCPOG00000033003)	PRPF40B (ENSCPOG00000001883) #18	FMNL3 (ENSCPOG00000001888) #20	TMBIM6 (ENSCPOG00000002195) #22	NCKAP5L (ENSCPOG00000013063) #24	BCDIN3D (ENSCPOG00000039774) #25	FAIM2 (ENSCPOG00000037651) #29	AQP2 (ENSCPOG00000022039) #31	AQP5 (ENSCPOG00000027598) #32	AQP6 (ENSCPOG00000004378) #33	RACGAP1 (ENSCPOG00000004383) #34	ASIC1 (ENSCPOG00000000413) #35	SMARCD1 (ENSCPOG00000038875) #36	GPD1 (ENSCPOG00000000417)	CERS5 (ENSCPOG00000000418)	LIMA1 (ENSCPOG00000000521)	ENSCPOG00000024814	ENSCPOG00000039626	LARP4 (ENSCPOG00000020519)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	3	DCAF10 (ENSHGLG00000005287)	SLC25A51 (ENSHGLG00000046859)	SHB (ENSHGLG00000003821)	ENSHGLG00000042112	ENSHGLG00000003240	ENSHGLG00000003016	ENSHGLG00000002600	TDRD7 (ENSHGLG00000001669)	ENSHGLG00000042975	TMOD1 (ENSHGLG00000001466)	TSTD2 (ENSHGLG00000002088)	ENSHGLG00000001882	XPA (ENSHGLG00000001605)	FOXE1 (ENSHGLG00000033854)	TRMO (ENSHGLG00000035772)	ENSHGLG00000049545 #22	HEMGN (ENSHGLG00000002822)	ENSHGLG00000049665	ANP32B (ENSHGLG00000046539)	NANS (ENSHGLG00000002503)	TRIM14 (ENSHGLG00000003771)	CORO2A (ENSHGLG00000043978)	TBC1D2 (ENSHGLG00000002200)	GABBR2 (ENSHGLG00000003518)	ANKS6 (ENSHGLG00000003003)	GALNT12 (ENSHGLG00000002782)	COL15A1 (ENSHGLG00000002025)	TGFBR1 (ENSHGLG00000002925)	ALG2 (ENSHGLG00000002815)	SEC61B (ENSHGLG00000045366)	ENSHGLG00000037562
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000046022	TUBA1B (ENSHGLG00000036029)	ENSHGLG00000007474	TUBA1A (ENSHGLG00000005735)	TUBA1C (ENSHGLG00000016979)	PRPH (ENSHGLG00000004209)	TROAP (ENSHGLG00000003554)	C1QL4 (ENSHGLG00000010938)	DNAJC22 (ENSHGLG00000010595)	ENSHGLG00000008867	KCNH3 (ENSHGLG00000007224) #16	MCRS1 (ENSHGLG00000006709) #17	PRPF40B (ENSHGLG00000004120) #18	ENSHGLG00000040234	FMNL3 (ENSHGLG00000007126) #20	ENSHGLG00000004558 #22	ENSHGLG00000034506	NCKAP5L (ENSHGLG00000007784) #24	BCDIN3D (ENSHGLG00000048029) #25	FAIM2 (ENSHGLG00000033168) #29	AQP2 (ENSHGLG00000004210) #31	ENSHGLG00000048362	AQP5 (ENSHGLG00000004009) #32	ENSHGLG00000044398	AQP6 (ENSHGLG00000003440) #33	RACGAP1 (ENSHGLG00000005812) #34	Asic1 (ENSHGLG00000004300) #35	SMARCD1 (ENSHGLG00000003601) #36	ENSHGLG00000003935 #37	GPD1 (ENSHGLG00000006106)	ENSHGLG00000005048
Naked mole-rat female	MODERN SPECIES	10	PPM1J (ENSHGLG00000009548)	TAFA3 (ENSHGLG00000018506)	ENSHGLG00000034195	ENSHGLG00000016346	LRIG2 (ENSHGLG00000016354)	ENSHGLG00000035626	MAGI3 (ENSHGLG00000005209)	PHTF1 (ENSHGLG00000015252)	RSBN1 (ENSHGLG00000009455)	ENSHGLG00000033150	PTPN22 (ENSHGLG00000010840)	AP4B1 (ENSHGLG00000005105)	DCLRE1B (ENSHGLG00000042662)	HIPK1 (ENSHGLG00000008264)	OLFML3 (ENSHGLG00000009717)	ENSHGLG00000020883 #22	ENSHGLG00000033308	SYT6 (ENSHGLG00000013174)	ENSHGLG00000050970	TRIM33 (ENSHGLG00000015394)	BCAS2 (ENSHGLG00000013708)	ENSHGLG00000015587	AMPD1 (ENSHGLG00000016007)	ENSHGLG00000009388	CSDE1 (ENSHGLG00000009620)	SIKE1 (ENSHGLG00000015408)	ENSHGLG00000032648	ENSHGLG00000004974	ENSHGLG00000047308	ENSHGLG00000006103	TSHB (ENSHGLG00000014600)
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.i.a
Eurasian red squirrel	MODERN SPECIES	14	LMBR1L (ENSSVLG00005014035)	TUBA1B (ENSSVLG00005014122)	TUBA1A (ENSSVLG00005014169)	TUBA1C (ENSSVLG00005014280)	PRPH (ENSSVLG00005014401)	TROAP (ENSSVLG00005014514)	C1QL4 (ENSSVLG00005014552)	DNAJC22 (ENSSVLG00005014577)	SPATS2 (ENSSVLG00005014637)	KCNH3 (ENSSVLG00005014784) #16	MCRS1 (ENSSVLG00005014844) #17	FAM186B (ENSSVLG00005015063)	ENSSVLG00005015194	PRPF40B (ENSSVLG00005015266) #18	FMNL3 (ENSSVLG00005015953) #20	TMBIM6 (ENSSVLG00005016085) #22	ENSSVLG00005016133	NCKAP5L (ENSSVLG00005016159) #24	BCDIN3D (ENSSVLG00005016270) #25	ENSSVLG00005016310	FAIM2 (ENSSVLG00005016322) #29	AQP2 (ENSSVLG00005016529) #31	AQP5 (ENSSVLG00005016577) #32	AQP6 (ENSSVLG00005016621) #33	RACGAP1 (ENSSVLG00005016710) #34	ASIC1 (ENSSVLG00005016755) #35	SMARCD1 (ENSSVLG00005017007) #36	GPD1 (ENSSVLG00005017224)	COX14 (ENSSVLG00005017409)	CERS5 (ENSSVLG00005017441)	LIMA1 (ENSSVLG00005017526)
Marmotini	ANCESTRAL SPECIES	19	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00950000185831	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b.j #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.i.a
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b.j #34	ENSGT00940000158414 #35	ENSGT00940000156629.u #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.i.a
Arctic ground squirrel	MODERN SPECIES	348	RHEBL1 (ENSUPAG00010009539)	DHH (ENSUPAG00010009573)	LMBR1L (ENSUPAG00010009579)	TUBA1B (ENSUPAG00010009604)	TUBA1C (ENSUPAG00010009626)	PRPH (ENSUPAG00010009633)	ENSUPAG00010009642	C1QL4 (ENSUPAG00010009646)	DNAJC22 (ENSUPAG00010009654)	SPATS2 (ENSUPAG00010009659)	KCNH3 (ENSUPAG00010009677) #16	MCRS1 (ENSUPAG00010009699) #17	FAM186B (ENSUPAG00010009728)	PRPF40B (ENSUPAG00010009744) #18	FMNL3 (ENSUPAG00010009805) #20	TMBIM6 (ENSUPAG00010009879) #22	NCKAP5L (ENSUPAG00010009897) #24	BCDIN3D (ENSUPAG00010009912) #25	FAIM2 (ENSUPAG00010009920) #29	AQP2 (ENSUPAG00010009953) #31	AQP5 (ENSUPAG00010009963) #32	AQP6 (ENSUPAG00010009981) #33	RACGAP1 (ENSUPAG00010009990) #34	ENSUPAG00010010033	ASIC1 (ENSUPAG00010010041) #35	ENSUPAG00010010097 #36	GPD1 (ENSUPAG00010010135)	CERS5 (ENSUPAG00010010155)	LIMA1 (ENSUPAG00010010198)	FAM186A (ENSUPAG00010010227)	LARP4 (ENSUPAG00010010256)
Squirrel	MODERN SPECIES	112	DHH (ENSSTOG00000000186)	LMBR1L (ENSSTOG00000008752)	TUBA1A (ENSSTOG00000033698)	TUBA1B (ENSSTOG00000021170)	ENSSTOG00000020227 ##14	PRPH (ENSSTOG00000000282)	ENSSTOG00000004941	C1QL4 (ENSSTOG00000024334)	DNAJC22 (ENSSTOG00000029066)	SPATS2 (ENSSTOG00000009081)	KCNH3 (ENSSTOG00000001084) #16	MCRS1 (ENSSTOG00000001093) #17	FAM186B (ENSSTOG00000026279)	PRPF40B (ENSSTOG00000001132) #18	FMNL3 (ENSSTOG00000001149) #20	TMBIM6 (ENSSTOG00000001165) #22	NCKAP5L (ENSSTOG00000022659) #24	BCDIN3D (ENSSTOG00000021275) #25	FAIM2 (ENSSTOG00000027904) #29	AQP2 (ENSSTOG00000011259) #31	AQP5 (ENSSTOG00000011261) #32	AQP6 (ENSSTOG00000025554) #33	ENSSTOG00000011264 #34	ASIC1 (ENSSTOG00000004908) #35	SMARCD1 (ENSSTOG00000032441) #36	GPD1 (ENSSTOG00000004948)	COX14 (ENSSTOG00000004975)	CERS5 (ENSSTOG00000004980)	LIMA1 (ENSSTOG00000004992)	ENSSTOG00000032900	LARP4 (ENSSTOG00000003553)
Alpin marmot	MODERN SPECIES	34	LMBR1L (ENSMMMG00000023056)	TUBA1A (ENSMMMG00000023062)	TUBA1C (ENSMMMG00000023064)	PRPH (ENSMMMG00000023068)	ENSMMMG00000023070	ENSMMMG00000023075	C1QL4 (ENSMMMG00000023079)	DNAJC22 (ENSMMMG00000023081)	ENSMMMG00000023084	SPATS2 (ENSMMMG00000023085)	KCNH3 (ENSMMMG00000023088) #16	MCRS1 (ENSMMMG00000023094) #17	FAM186B (ENSMMMG00000023098)	PRPF40B (ENSMMMG00000023101) #18	FMNL3 (ENSMMMG00000023122) #20	TMBIM6 (ENSMMMG00000023160) #22	NCKAP5L (ENSMMMG00000023183) #24	BCDIN3D (ENSMMMG00000023186) #25	FAIM2 (ENSMMMG00000023188) #29	AQP2 (ENSMMMG00000023195) #31	AQP5 (ENSMMMG00000023197) #32	AQP6 (ENSMMMG00000023204) #33	ENSMMMG00000023206 #34	ASIC1 (ENSMMMG00000023219) #35	SMARCD1 (ENSMMMG00000023232) #36	GPD1 (ENSMMMG00000023246)	COX14 (ENSMMMG00000023249)	CERS5 (ENSMMMG00000023250)	LIMA1 (ENSMMMG00000023257)	ENSMMMG00000023263	ENSMMMG00000023269
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Lesser Egyptian jerboa	MODERN SPECIES	42									Spats2 (ENSJJAG00000010145)	ENSJJAG00000012489	Kcnh3 (ENSJJAG00000020110) #16	Mcrs1 (ENSJJAG00000020357) #17	Fam186b (ENSJJAG00000021028)	Prpf40b (ENSJJAG00000014805) #18	Fmnl3 (ENSJJAG00000015497) #20	Tmbim6 (ENSJJAG00000023466) #22	Nckap5l (ENSJJAG00000023097) #24	Bcdin3d (ENSJJAG00000013981) #25	Faim2 (ENSJJAG00000012628) #29	Aqp2 (ENSJJAG00000021696) #31	Aqp5 (ENSJJAG00000007758) #32	Aqp6 (ENSJJAG00000021101) #33	Racgap1 (ENSJJAG00000020476) #34	Asic1 (ENSJJAG00000021289) #35	Smarcd1 (ENSJJAG00000015550) #36	Gpd1 (ENSJJAG00000021922)	Cers5 (ENSJJAG00000023418)	Lima1 (ENSJJAG00000012969)	ENSJJAG00000001889	ENSJJAG00000014649	Dip2b (ENSJJAG00000010269)
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1453														Prpf40b (ENSNGAG00000020005) #18	Fmnl3 (ENSNGAG00000004258) #20	ENSNGAG00000000369 #22	Nckap5l (ENSNGAG00000001434) #24	Bcdin3d (ENSNGAG00000014829) #25	Faim2 (ENSNGAG00000015711) #29	Aqp2 (ENSNGAG00000020740) #31	Aqp5 (ENSNGAG00000000343) #32	Aqp6 (ENSNGAG00000000487) #33	Racgap1 (ENSNGAG00000008592) #34	ENSNGAG00000014765	Asic1 (ENSNGAG00000000530) #35	Smarcd1 (ENSNGAG00000002751) #36	Gpd1 (ENSNGAG00000008342)	Cox14 (ENSNGAG00000010870)	Cers5 (ENSNGAG00000008489)	Lima1 (ENSNGAG00000020939)
Upper Galilee mountains blind mole rat	MODERN SPECIES	936												Ubr2 (ENSNGAG00000010434)	Prph2 (ENSNGAG00000021489)	Tbcc (ENSNGAG00000004461)	ENSNGAG00000016833	ENSNGAG00000011409 #22	Bicral (ENSNGAG00000014898)	Rpl7l1 (ENSNGAG00000019255)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1707	Tada3 (ENSNGAG00000021414)	Camk1 (ENSNGAG00000023744)	Ogg1 (ENSNGAG00000020036)	Brpf1 (ENSNGAG00000009975)	Cpne9 (ENSNGAG00000016783)	Mtmr14 (ENSNGAG00000012586)	Lhfpl4 (ENSNGAG00000023038)	Setd5 (ENSNGAG00000021493)	ENSNGAG00000021014	Srgap3 (ENSNGAG00000020921)	Rad18 (ENSNGAG00000012464)	Oxtr (ENSNGAG00000023128)	Cav3 (ENSNGAG00000022726)	Ssu2 (ENSNGAG00000007680)	Lmcd1 (ENSNGAG00000005048)	ENSNGAG00000000864 #22	Grm7 (ENSNGAG00000022295)
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT01100000263763
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT01100000263763
Chinese hamster chok1gshd	MODERN SPECIES	1	Lmbr1l (ENSCGRG00001008575)	ENSCGRG00001011667	ENSCGRG00001007551	TUBA1C (ENSCGRG00001011520)	Prph (ENSCGRG00001006972)	Troap (ENSCGRG00001006824)	C1ql4 (ENSCGRG00001013077)	Dnajc22 (ENSCGRG00001007800)	Spats2 (ENSCGRG00001009831)	Kcnh3 (ENSCGRG00001005862) #16	Mcrs1 (ENSCGRG00001005113) #17	Fam186b (ENSCGRG00001009868)	Prpf40b (ENSCGRG00001006447) #18	Fmnl3 (ENSCGRG00001011154) #20	ENSCGRG00001018631	Tmbim6 (ENSCGRG00001006733) #22	Nckap5l (ENSCGRG00001013558) #24	Bcdin3d (ENSCGRG00001007320) #25	ENSCGRG00001013010	Faim2 (ENSCGRG00001006587) #29	Aqp2 (ENSCGRG00001011575) #31	Aqp5 (ENSCGRG00001009707) #32	Aqp6 (ENSCGRG00001012509) #33	Racgap1 (ENSCGRG00001006150) #34	Asic1 (ENSCGRG00001006030) #35	ENSCGRG00001010607 #37	Smarcd1 (ENSCGRG00001007364) #36	Gpd1 (ENSCGRG00001009756)	Cox14 (ENSCGRG00001009193)	Cers5 (ENSCGRG00001010347)	Lima1 (ENSCGRG00001011635)
Golden Hamster	MODERN SPECIES	626	ENSMAUG00000012028	ENSMAUG00000012521	Rhebl1 (ENSMAUG00000013128)	Dhh (ENSMAUG00000013999)	Lmbr1l (ENSMAUG00000014206)	Prph (ENSMAUG00000015253)	Troap (ENSMAUG00000015646)	C1ql4 (ENSMAUG00000017527)	Dnajc22 (ENSMAUG00000018012)	Spats2 (ENSMAUG00000018701)	Kcnh3 (ENSMAUG00000012377) #16	Mcrs1 (ENSMAUG00000013482) #17	Fam186b (ENSMAUG00000013956)	Prpf40b (ENSMAUG00000012461) #18	Fmnl3 (ENSMAUG00000015480) #20	Tmbim6 (ENSMAUG00000016188) #22	Nckap5l (ENSMAUG00000012576) #24	Bcdin3d (ENSMAUG00000011271) #25	Faim2 (ENSMAUG00000011863) #29	Aqp2 (ENSMAUG00000012268) #31	Aqp5 (ENSMAUG00000012352) #32	Aqp6 (ENSMAUG00000013102) #33	ENSMAUG00000013978 #34	Asic1 (ENSMAUG00000018938) #35	Smarcd1 (ENSMAUG00000019411) #36	Gpd1 (ENSMAUG00000011436)	Cox14 (ENSMAUG00000011751)	Lima1 (ENSMAUG00000011493)	ENSMAUG00000011781	Larp4 (ENSMAUG00000012844)	Dip2b (ENSMAUG00000016394)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000156707	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT01100000263763	ENSGT00940000154409
Prairie vole	MODERN SPECIES	2	Rhebl1 (ENSMOCG00000004742)	Dhh (ENSMOCG00000000393)	Lmbr1l (ENSMOCG00000012252)	Tuba1c (ENSMOCG00000011887)	Prph (ENSMOCG00000010753)	ENSMOCG00000001429	Troap (ENSMOCG00000010185)	C1ql4 (ENSMOCG00000001754)	Dnajc22 (ENSMOCG00000021223)	Spats2 (ENSMOCG00000006395)	Kcnh3 (ENSMOCG00000000540) #16	Mcrs1 (ENSMOCG00000022586) #17	Fam186b (ENSMOCG00000018843)	Prpf40b (ENSMOCG00000000866) #18	Fmnl3 (ENSMOCG00000007174) #20	Tmbim6 (ENSMOCG00000012246) #22	Nckap5l (ENSMOCG00000006203) #24	Bcdin3d (ENSMOCG00000019038) #25	Faim2 (ENSMOCG00000005201) #29	Aqp2 (ENSMOCG00000020076) #31	Aqp5 (ENSMOCG00000015063) #32	Aqp6 (ENSMOCG00000005522) #33	ENSMOCG00000001422 #34	Asic1 (ENSMOCG00000015709) #35	Smarcd1 (ENSMOCG00000010596) #36	Gpd1 (ENSMOCG00000012228)	Cox14 (ENSMOCG00000009917)	ENSMOCG00000009853	Cers5 (ENSMOCG00000019581)	Lima1 (ENSMOCG00000003899)	ENSMOCG00000018505
Northern American deer mouse	MODERN SPECIES	12	ENSPEMG00000015247	Rhebl1 (ENSPEMG00000018904)	Dhh (ENSPEMG00000029701)	ENSPEMG00000029758	Tuba1c (ENSPEMG00000025359)	Prph (ENSPEMG00000011347)	Troap (ENSPEMG00000009011)	C1ql4 (ENSPEMG00000018028)	Dnajc22 (ENSPEMG00000015796)	Spats2 (ENSPEMG00000008842)	Kcnh3 (ENSPEMG00000018202) #16	Mcrs1 (ENSPEMG00000016857) #17	Fam186b (ENSPEMG00000011794)	Prpf40b (ENSPEMG00000016051) #18	Fmnl3 (ENSPEMG00000022670) #20	Tmbim6 (ENSPEMG00000000013) #22	Nckap5l (ENSPEMG00000015341) #24	Bcdin3d (ENSPEMG00000011046) #25	Faim2 (ENSPEMG00000011638) #29	ENSPEMG00000003246 #31	Aqp5 (ENSPEMG00000025856) #32	Aqp6 (ENSPEMG00000020561) #33	Racgap1 (ENSPEMG00000020606) #34	Asic1 (ENSPEMG00000018402) #35	Smarcd1 (ENSPEMG00000017159) #36	Gpd1 (ENSPEMG00000026722)	Cox14 (ENSPEMG00000027539)	Cers5 (ENSPEMG00000012852)	Lima1 (ENSPEMG00000003334)	ENSPEMG00000011861	Larp4 (ENSPEMG00000018433)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Mus	ANCESTRAL SPECIES	11	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Mouse	MODERN SPECIES	6	Lmbr1l (ENSMUSG00000022999)	Tuba1b (ENSMUSG00000023004)	Gm49450 (ENSMUSG00000116358)	Tuba1a (ENSMUSG00000072235)	Tuba1c (ENSMUSG00000043091)	Prph (ENSMUSG00000023484)	Troap (ENSMUSG00000032783)	C1ql4 (ENSMUSG00000001076)	Dnajc22 (ENSMUSG00000038009)	Spats2 (ENSMUSG00000051934)	Kcnh3 (ENSMUSG00000037579) #16	Mcrs1 (ENSMUSG00000037570) #17	Fam186b (ENSMUSG00000078907)	Prpf40b (ENSMUSG00000023007) #18	Fmnl3 (ENSMUSG00000023008) #20	Tmbim6 (ENSMUSG00000023010) #22	Nckap5l (ENSMUSG00000023009) #24	Bcdin3d (ENSMUSG00000037525) #25	Faim2 (ENSMUSG00000023011) #29	Aqp2 (ENSMUSG00000023013) #31	Aqp5 (ENSMUSG00000044217) #32	Aqp6 (ENSMUSG00000043144) #33	Racgap1 (ENSMUSG00000023015) #34	Asic1 (ENSMUSG00000023017) #35	Smarcd1 (ENSMUSG00000023018) #36	Gpd1 (ENSMUSG00000023019)	Cox14 (ENSMUSG00000023020)	Cers5 (ENSMUSG00000023021)	Lima1 (ENSMUSG00000023022)	Fam186a (ENSMUSG00000045350)	Larp4 (ENSMUSG00000023025)
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00860000135898 #37	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
spretus	MODERN SPECIES	6	Prkag1 (MGP_SPRETEiJ_G0021145)	Kmt2d (MGP_SPRETEiJ_G0021146)	Rhebl1 (MGP_SPRETEiJ_G0021147)	Dhh (MGP_SPRETEiJ_G0021148)	Lmbr1l (MGP_SPRETEiJ_G0021149)	Prph (MGP_SPRETEiJ_G0021150)	Troap (MGP_SPRETEiJ_G0021151)	C1ql4 (MGP_SPRETEiJ_G0021152)	Dnajc22 (MGP_SPRETEiJ_G0021153)	Spats2 (MGP_SPRETEiJ_G0021154)	Kcnh3 (MGP_SPRETEiJ_G0021155) #16	Mcrs1 (MGP_SPRETEiJ_G0021156) #17	Fam186b (MGP_SPRETEiJ_G0021157)	Prpf40b (MGP_SPRETEiJ_G0021158) #18	Fmnl3 (MGP_SPRETEiJ_G0021159) #20	Tmbim6 (MGP_SPRETEiJ_G0021160) #22	Nckap5l (MGP_SPRETEiJ_G0021161) #24	Bcdin3d (MGP_SPRETEiJ_G0021162) #25	Faim2 (MGP_SPRETEiJ_G0021163) #29	Aqp2 (MGP_SPRETEiJ_G0021164) #31	Aqp5 (MGP_SPRETEiJ_G0021165) #32	Aqp6 (MGP_SPRETEiJ_G0021166) #33	Racgap1 (MGP_SPRETEiJ_G0021167) #34	MGP_SPRETEiJ_G0021168 #35	MGP_SPRETEiJ_G0021169 #37	Smarcd1 (MGP_SPRETEiJ_G0021170) #36	Gpd1 (MGP_SPRETEiJ_G0021171)	Cox14 (MGP_SPRETEiJ_G0021172)	Cers5 (MGP_SPRETEiJ_G0021173)	Lima1 (MGP_SPRETEiJ_G0021174)	MGP_SPRETEiJ_G0021175
Steppe mouse	MODERN SPECIES	3092	Lmbr1l (ENSMSIG00000002200)	ENSMSIG00000002356	Tuba1a (ENSMSIG00000002382)	Tuba1c (ENSMSIG00000002410)	Prph (ENSMSIG00000002429)	Troap (ENSMSIG00000002521)	C1ql4 (ENSMSIG00000002578)	Dnajc22 (ENSMSIG00000002606)	ENSMSIG00000002617	Spats2 (ENSMSIG00000002634)	Kcnh3 (ENSMSIG00000002698) #16	ENSMSIG00000002780 #17	Fam186b (ENSMSIG00000002892)	Prpf40b (ENSMSIG00000002935) #18	Fmnl3 (ENSMSIG00000003188) #20	Tmbim6 (ENSMSIG00000003395) #22	Nckap5l (ENSMSIG00000003444) #24	Bcdin3d (ENSMSIG00000003506) #25	Faim2 (ENSMSIG00000003522) #29	ENSMSIG00000003581	Aqp2 (ENSMSIG00000003609) #31	Aqp5 (ENSMSIG00000003629) #32	Aqp6 (ENSMSIG00000003673) #33	Racgap1 (ENSMSIG00000003707) #34	ENSMSIG00000003836 #35
Ryukyu mouse	MODERN SPECIES	6	Rhebl1 (MGP_CAROLIEiJ_G0020250)	Dhh (MGP_CAROLIEiJ_G0020251)	Lmbr1l (MGP_CAROLIEiJ_G0020252)	MGP_CAROLIEiJ_G0020253	MGP_CAROLIEiJ_G0020254	Prph (MGP_CAROLIEiJ_G0020255)	Troap (MGP_CAROLIEiJ_G0020256)	C1ql4 (MGP_CAROLIEiJ_G0020257)	Dnajc22 (MGP_CAROLIEiJ_G0020258)	Spats2 (MGP_CAROLIEiJ_G0020259)	Kcnh3 (MGP_CAROLIEiJ_G0020260) #16	Mcrs1 (MGP_CAROLIEiJ_G0020261) #17	Fam186b (MGP_CAROLIEiJ_G0020262)	Prpf40b (MGP_CAROLIEiJ_G0020263) #18	Fmnl3 (MGP_CAROLIEiJ_G0020264) #20	Tmbim6 (MGP_CAROLIEiJ_G0020265) #22	Nckap5l (MGP_CAROLIEiJ_G0020266) #24	Bcdin3d (MGP_CAROLIEiJ_G0020267) #25	Faim2 (MGP_CAROLIEiJ_G0020268) #29	Aqp2 (MGP_CAROLIEiJ_G0020269) #31	Aqp5 (MGP_CAROLIEiJ_G0020270) #32	Aqp6 (MGP_CAROLIEiJ_G0020271) #33	Racgap1 (MGP_CAROLIEiJ_G0020272) #34	MGP_CAROLIEiJ_G0020273 #35	MGP_CAROLIEiJ_G0020274 #37	Smarcd1 (MGP_CAROLIEiJ_G0020275) #36	Gpd1 (MGP_CAROLIEiJ_G0020276)	Cox14 (MGP_CAROLIEiJ_G0020277)	Cers5 (MGP_CAROLIEiJ_G0020278)	Lima1 (MGP_CAROLIEiJ_G0020279)	MGP_CAROLIEiJ_G0020280
Shrew mouse	MODERN SPECIES	8	Rhebl1 (MGP_PahariEiJ_G0020253)	Dhh (MGP_PahariEiJ_G0020254)	Lmbr1l (MGP_PahariEiJ_G0020255)	MGP_PahariEiJ_G0020257	MGP_PahariEiJ_G0020256	MGP_PahariEiJ_G0020258	Troap (MGP_PahariEiJ_G0020259)	C1ql4 (MGP_PahariEiJ_G0020260)	Dnajc22 (MGP_PahariEiJ_G0020261)	Spats2 (MGP_PahariEiJ_G0020262)	Kcnh3 (MGP_PahariEiJ_G0020263) #16	Mcrs1 (MGP_PahariEiJ_G0020264) #17	Fam186b (MGP_PahariEiJ_G0020265)	Prpf40b (MGP_PahariEiJ_G0020266) #18	Fmnl3 (MGP_PahariEiJ_G0020267) #20	Tmbim6 (MGP_PahariEiJ_G0020268) #22	Nckap5l (MGP_PahariEiJ_G0020269) #24	Bcdin3d (MGP_PahariEiJ_G0020270) #25	Faim2 (MGP_PahariEiJ_G0020271) #29	Aqp2 (MGP_PahariEiJ_G0020272) #31	Aqp5 (MGP_PahariEiJ_G0020273) #32	Aqp6 (MGP_PahariEiJ_G0020274) #33	Racgap1 (MGP_PahariEiJ_G0020275) #34	MGP_PahariEiJ_G0020276 #35	MGP_PahariEiJ_G0020277 #37	Smarcd1 (MGP_PahariEiJ_G0020278) #36	Gpd1 (MGP_PahariEiJ_G0020279)	Cox14 (MGP_PahariEiJ_G0020280)	Cers5 (MGP_PahariEiJ_G0020281)	Lima1 (MGP_PahariEiJ_G0020282)	MGP_PahariEiJ_G0020283
Rat	MODERN SPECIES	17	Lmbr1l (ENSRNOG00000061607)	Tuba1a (ENSRNOG00000053468)	AC114446.1 (ENSRNOG00000059545)	Tuba1c (ENSRNOG00000021438)	Prph (ENSRNOG00000052880)	Troap (ENSRNOG00000060703)	C1ql4 (ENSRNOG00000060020)	Dnajc22 (ENSRNOG00000053498)	Spats2 (ENSRNOG00000052307)	ENSRNOG00000064897	Kcnh3 (ENSRNOG00000057315) #16	Mcrs1 (ENSRNOG00000054838) #17	Fam186b (ENSRNOG00000054250)	Prpf40b (ENSRNOG00000052539) #18	Fmnl3 (ENSRNOG00000056297) #20	Tmbim6 (ENSRNOG00000055579) #22	Nckap5l (ENSRNOG00000056678) #24	Bcdin3d (ENSRNOG00000058430) #25	Faim2 (ENSRNOG00000045554) #29	Aqp6 (ENSRNOG00000063448) #33	Aqp6 (ENSRNOG00000053181) #33	Aqp2 (ENSRNOG00000054378) #31	Aqp5 (ENSRNOG00000051970) #32	Racgap1 (ENSRNOG00000049033) #34	Asic1 (ENSRNOG00000059765) #35	Gm17349 (ENSRNOG00000070544) #37	Smarcd1 (ENSRNOG00000061572) #36	Gpd1 (ENSRNOG00000056457)	Cers5 (ENSRNOG00000052990)	Lima1 (ENSRNOG00000059801)	ENSRNOG00000065833
Lagomorpha	ANCESTRAL SPECIES	81	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.a ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Pika	MODERN SPECIES	1324													FAM186B (ENSOPRG00000004544)	PRPF40B (ENSOPRG00000004565) #18	FMNL3 (ENSOPRG00000004612) #20	TMBIM6 (ENSOPRG00000004682) #22	NCKAP5L (ENSOPRG00000004705) #24	ENSOPRG00000018470 #24
Rabbit	MODERN SPECIES	15	RHEBL1 (ENSOCUG00000016881)	DHH (ENSOCUG00000029219)	LMBR1L (ENSOCUG00000011586)	ENSOCUG00000027812	ENSOCUG00000023038	TUBA1C (ENSOCUG00000028032)	PRPH (ENSOCUG00000006188)	ENSOCUG00000023285	C1QL4 (ENSOCUG00000021984)	SPATS2 (ENSOCUG00000016805)	KCNH3 (ENSOCUG00000023146) #16	MCRS1 (ENSOCUG00000016821) #17	ENSOCUG00000003332	PRPF40B (ENSOCUG00000001750) #18	FMNL3 (ENSOCUG00000001754) #20	TMBIM6 (ENSOCUG00000001847) #22	NCKAP5L (ENSOCUG00000001851) #24	BCDIN3D (ENSOCUG00000001545) #25	FAIM2 (ENSOCUG00000011476) #29	AQP2 (ENSOCUG00000004635) #31	AQP6 (ENSOCUG00000004641) #33	RACGAP1 (ENSOCUG00000015681) #34	ASIC1 (ENSOCUG00000015699) #35	SMARCD1 (ENSOCUG00000015715) #36	COX14 (ENSOCUG00000034485)	CERS5 (ENSOCUG00000012843)	LIMA1 (ENSOCUG00000012851)	ENSOCUG00000035149	ENSOCUG00000035833	ATF1 (ENSOCUG00000017023)	DIP2B (ENSOCUG00000012013)
Tree shrew	MODERN SPECIES	6303																TMBIM6 (ENSTBEG00000012070) #22
Primates	ANCESTRAL SPECIES	6	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00990000203730
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	29	DHH (ENSMICG00000017549)	LMBR1L (ENSMICG00000017550)	TUBA1B (ENSMICG00000046786)	TUBA1A (ENSMICG00000031961)	ENSMICG00000036184 ##14	PRPH (ENSMICG00000016388)	TROAP (ENSMICG00000016409)	C1QL4 (ENSMICG00000028110)	ENSMICG00000015512	SPATS2 (ENSMICG00000005156)	KCNH3 (ENSMICG00000042125) #16	MCRS1 (ENSMICG00000005176) #17	FAM186B (ENSMICG00000027100)	PRPF40B (ENSMICG00000005196) #18	FMNL3 (ENSMICG00000005219) #20	ENSMICG00000026577 #22	NCKAP5L (ENSMICG00000005160) #24	BCDIN3D (ENSMICG00000031908) #25	FAIM2 (ENSMICG00000015588) #29	AQP2 (ENSMICG00000036745) #31	AQP5 (ENSMICG00000015604) #32	AQP6 (ENSMICG00000038503) #33	RACGAP1 (ENSMICG00000015618) #34	ASIC1 (ENSMICG00000015635) #35	SMARCD1 (ENSMICG00000015651) #36	GPD1 (ENSMICG00000015665)	CERS5 (ENSMICG00000015675)	LIMA1 (ENSMICG00000015696)	ENSMICG00000034794	ENSMICG00000017886	FAM186A (ENSMICG00000035471)
Mouse lemur	MODERN SPECIES	13	ZNF140 (ENSMICG00000029979)	ZNF10 (ENSMICG00000015899)	ZNF268 (ENSMICG00000034406)	ANHX (ENSMICG00000034864)	ENSMICG00000011410	ENSMICG00000002961	HECTD4 (ENSMICG00000031645)	TRAFD1 (ENSMICG00000039369)	ENSMICG00000031690	NAA25 (ENSMICG00000013873)	ENSMICG00000038501	ENSMICG00000002072	ENSMICG00000029924	MAPKAPK5 (ENSMICG00000010509)	ALDH2 (ENSMICG00000003487)	ENSMICG00000029763 #22	ACAD10 (ENSMICG00000003477)	BRAP (ENSMICG00000003473)	ATXN2 (ENSMICG00000013541)	SH2B3 (ENSMICG00000013525)	CUX2 (ENSMICG00000012274)	MYL2 (ENSMICG00000004969)	CCDC63 (ENSMICG00000004966)	ENSMICG00000004963	HVCN1 (ENSMICG00000004957)	TCTN1 (ENSMICG00000004952)	PPTC7 (ENSMICG00000042392)	RAD9B (ENSMICG00000038244)	ENSMICG00000027161	FAM216A (ENSMICG00000047396)	ENSMICG00000035780
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00990000203730
Greater bamboo lemur	MODERN SPECIES	908						PRPH (ENSPSMG00000017749)	TROAP (ENSPSMG00000017778)	C1QL4 (ENSPSMG00000017784)	DNAJC22 (ENSPSMG00000017791)	SPATS2 (ENSPSMG00000017827)	KCNH3 (ENSPSMG00000017902) #16	MCRS1 (ENSPSMG00000017933) #17	FAM186B (ENSPSMG00000017938)	PRPF40B (ENSPSMG00000018000) #18	FMNL3 (ENSPSMG00000018122) #20	TMBIM6 (ENSPSMG00000018187) #22	NCKAP5L (ENSPSMG00000018220) #24	BCDIN3D (ENSPSMG00000018226) #25
Coquerels sifaka	MODERN SPECIES	91	RHEBL1 (ENSPCOG00000025412)	DHH (ENSPCOG00000000341)	LMBR1L (ENSPCOG00000021876)	TUBA1A (ENSPCOG00000014540)	TUBA1C (ENSPCOG00000023706)	PRPH (ENSPCOG00000024415)	TROAP (ENSPCOG00000020936)	C1QL4 (ENSPCOG00000027021)	DNAJC22 (ENSPCOG00000000919)	SPATS2 (ENSPCOG00000020506)	KCNH3 (ENSPCOG00000025547) #16	MCRS1 (ENSPCOG00000024998) #17	FAM186B (ENSPCOG00000024952)	PRPF40B (ENSPCOG00000027705) #18	FMNL3 (ENSPCOG00000017512) #20	TMBIM6 (ENSPCOG00000023018) #22	NCKAP5L (ENSPCOG00000001081) #24	BCDIN3D (ENSPCOG00000025127) #25	FAIM2 (ENSPCOG00000013476) #29	AQP2 (ENSPCOG00000019564) #31	AQP5 (ENSPCOG00000000865) #32	AQP6 (ENSPCOG00000001175) #33	RACGAP1 (ENSPCOG00000017940) #34	ASIC1 (ENSPCOG00000021809) #35	SMARCD1 (ENSPCOG00000026807) #36	GPD1 (ENSPCOG00000028459)	CERS5 (ENSPCOG00000005534)	LIMA1 (ENSPCOG00000025292)	FAM186A (ENSPCOG00000019884)	ENSPCOG00000014557	LARP4 (ENSPCOG00000026291)
Bushbaby	MODERN SPECIES	185	ENSOGAG00000013477	DHH (ENSOGAG00000034671)	LMBR1L (ENSOGAG00000005451)	TUBA1B (ENSOGAG00000009435)	ENSOGAG00000032046	PRPH (ENSOGAG00000009430)	TROAP (ENSOGAG00000009440)	C1QL4 (ENSOGAG00000009444)	DNAJC22 (ENSOGAG00000009446)	SPATS2 (ENSOGAG00000005108)	KCNH3 (ENSOGAG00000005113) #16	MCRS1 (ENSOGAG00000005116) #17	FAM186B (ENSOGAG00000005122)	PRPF40B (ENSOGAG00000005126) #18	ENSOGAG00000005132	TMBIM6 (ENSOGAG00000005137) #22	NCKAP5L (ENSOGAG00000032286) #24	ENSOGAG00000013908 #25	FAIM2 (ENSOGAG00000025824) #29	AQP2 (ENSOGAG00000004653) #31	AQP5 (ENSOGAG00000016706) #32	AQP6 (ENSOGAG00000004655) #33	RACGAP1 (ENSOGAG00000004657) #34
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b ##14	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT00910000148021	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT00910000148021	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Hominidae	ANCESTRAL SPECIES	4	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.c
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.c
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00940000163376	ENSGT00940000154409.c
Pan	ANCESTRAL SPECIES	4	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00390000016972.a.a.b.b.b.a.b.c ##26	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00910000146814	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Chimpanzee	MODERN SPECIES	3	LMBR1L (ENSPTRG00000004899)	TUBA1B (ENSPTRG00000045808)	TUBA1A (ENSPTRG00000004901)	TUBA1C (ENSPTRG00000048544)	PRPH (ENSPTRG00000004903)	TROAP (ENSPTRG00000004904)	C1QL4 (ENSPTRG00000004905)	DNAJC22 (ENSPTRG00000004906)	SPATS2 (ENSPTRG00000004907)	KCNH3 (ENSPTRG00000004909) #16	MCRS1 (ENSPTRG00000004910) #17	ENSPTRG00000045426	FAM186B (ENSPTRG00000004911)	PRPF40B (ENSPTRG00000004912) #18	FMNL3 (ENSPTRG00000004913) #20	TMBIM6 (ENSPTRG00000004914) #22	NCKAP5L (ENSPTRG00000023249) #24	BCDIN3D (ENSPTRG00000004916) #25	ENSPTRG00000046927 ##26	ENSPTRG00000052323	FAIM2 (ENSPTRG00000004917) #29	AQP2 (ENSPTRG00000050440) #31	AQP5 (ENSPTRG00000004919) #32	AQP6 (ENSPTRG00000004920) #33	RACGAP1 (ENSPTRG00000004921) #34	ASIC1 (ENSPTRG00000004923) #35	SMARCD1 (ENSPTRG00000004924) #36	GPD1 (ENSPTRG00000004925)	CERS5 (ENSPTRG00000004927)	LIMA1 (ENSPTRG00000004928)	ENSPTRG00000052700
Bonobo	MODERN SPECIES	3	LMBR1L (ENSPPAG00000043358)	TUBA1B (ENSPPAG00000042451)	ENSPPAG00000025479	TUBA1C (ENSPPAG00000033269)	PRPH (ENSPPAG00000034520)	TROAP (ENSPPAG00000030045)	C1QL4 (ENSPPAG00000034273)	DNAJC22 (ENSPPAG00000020830)	SPATS2 (ENSPPAG00000026248)	KCNH3 (ENSPPAG00000032532) #16	MCRS1 (ENSPPAG00000040683) #17	ENSPPAG00000034822	FAM186B (ENSPPAG00000028476)	PRPF40B (ENSPPAG00000028376) #18	FMNL3 (ENSPPAG00000029652) #20	TMBIM6 (ENSPPAG00000033561) #22	NCKAP5L (ENSPPAG00000018344) #24	BCDIN3D (ENSPPAG00000019278) #25	ENSPPAG00000038852 ##26	ENSPPAG00000035640	FAIM2 (ENSPPAG00000043254) #29	AQP2 (ENSPPAG00000042981) #31	AQP5 (ENSPPAG00000038003) #32	AQP6 (ENSPPAG00000043622) #33	RACGAP1 (ENSPPAG00000043091) #34	ENSPPAG00000037367 #35	SMARCD1 (ENSPPAG00000032789) #36	GPD1 (ENSPPAG00000035089)	ENSPPAG00000026220	CERS5 (ENSPPAG00000035094)	LIMA1 (ENSPPAG00000038984)
Human	MODERN SPECIES	3	DHH (ENSG00000139549)	LMBR1L (ENSG00000139636)	TUBA1B (ENSG00000123416)	TUBA1A (ENSG00000167552)	TUBA1C (ENSG00000167553)	PRPH (ENSG00000135406)	TROAP (ENSG00000135451)	C1QL4 (ENSG00000186897)	DNAJC22 (ENSG00000178401)	SPATS2 (ENSG00000123352)	KCNH3 (ENSG00000135519) #16	MCRS1 (ENSG00000187778) #17	PRPF40B (ENSG00000110844) #18	FAM186B (ENSG00000135436)	FMNL3 (ENSG00000161791) #20	TMBIM6 (ENSG00000139644) #22	NCKAP5L (ENSG00000167566) #24	BCDIN3D (ENSG00000186666) #25	FAIM2 (ENSG00000135472) #29	AQP2 (ENSG00000167580) #31	AQP5 (ENSG00000161798) #32	AQP6 (ENSG00000086159) #33	RACGAP1 (ENSG00000161800) #34	ASIC1 (ENSG00000110881) #35	SMARCD1 (ENSG00000066117) #36	GPD1 (ENSG00000167588)	COX14 (ENSG00000178449)	CERS5 (ENSG00000139624)	LIMA1 (ENSG00000050405)	FAM186A (ENSG00000185958)	LARP4 (ENSG00000161813)
Gorilla	MODERN SPECIES	3	TUBA1B (ENSGGOG00000028554)	TUBA1A (ENSGGOG00000005381)	TUBA1C (ENSGGOG00000000769)	PRPH (ENSGGOG00000025284)	TROAP (ENSGGOG00000012528)	C1QL4 (ENSGGOG00000012547)	DNAJC22 (ENSGGOG00000024291)	SPATS2 (ENSGGOG00000007336)	KCNH3 (ENSGGOG00000001559) #16	MCRS1 (ENSGGOG00000001566) #17	ENSGGOG00000015089	ENSGGOG00000024133	FAM186B (ENSGGOG00000001570)	PRPF40B (ENSGGOG00000001573) #18	FMNL3 (ENSGGOG00000001582) #20	TMBIM6 (ENSGGOG00000008786) #22	NCKAP5L (ENSGGOG00000016321) #24	ENSGGOG00000043961	ENSGGOG00000040523	FAIM2 (ENSGGOG00000006671) #29	AQP2 (ENSGGOG00000005897) #31	AQP5 (ENSGGOG00000005898) #32	AQP6 (ENSGGOG00000005905) #33	RACGAP1 (ENSGGOG00000002573) #34	ASIC1 (ENSGGOG00000004133) #35	SMARCD1 (ENSGGOG00000013355) #36	GPD1 (ENSGGOG00000011860)	ENSGGOG00000004317	CERS5 (ENSGGOG00000009137)	LIMA1 (ENSGGOG00000007975)	FAM186A (ENSGGOG00000016543)
Orangutan	MODERN SPECIES	3	RHEBL1 (ENSPPYG00000004479)	DHH (ENSPPYG00000004480)	LMBR1L (ENSPPYG00000004471)	TUBA1A (ENSPPYG00000004481)	TUBA1C (ENSPPYG00000004482)	PRPH (ENSPPYG00000004483)	TROAP (ENSPPYG00000004485)	C1QL4 (ENSPPYG00000004486)	DNAJC22 (ENSPPYG00000004487)	SPATS2 (ENSPPYG00000004488)	KCNH3 (ENSPPYG00000004489) #16	MCRS1 (ENSPPYG00000004490) #17	FAM186B (ENSPPYG00000004491)	PRPF40B (ENSPPYG00000004492) #18	FMNL3 (ENSPPYG00000004493) #20	TMBIM6 (ENSPPYG00000004495) #22	NCKAP5L (ENSPPYG00000004496) #24	BCDIN3D (ENSPPYG00000004498) #25	FAIM2 (ENSPPYG00000004499) #29	AQP2 (ENSPPYG00000038280) #31	ENSPPYG00000004501 #32	RACGAP1 (ENSPPYG00000004503) #34	ASIC1 (ENSPPYG00000004504) #35	SMARCD1 (ENSPPYG00000004505) #36	GPD1 (ENSPPYG00000004507)	COX14 (ENSPPYG00000004508)	CERS5 (ENSPPYG00000004509)	LIMA1 (ENSPPYG00000004510)	ENSPPYG00000033639	LARP4 (ENSPPYG00000004512)	DIP2B (ENSPPYG00000004514)
Gibbon	MODERN SPECIES	23	LMBR1L (ENSNLEG00000017843)	TUBA1A (ENSNLEG00000032990)	ENSNLEG00000017835 #14	ENSNLEG00000028012 ##14	PRPH (ENSNLEG00000017833)	TROAP (ENSNLEG00000017830)	DNAJC22 (ENSNLEG00000017829)	SPATS2 (ENSNLEG00000017828)	KCNH3 (ENSNLEG00000017827) #16	MCRS1 (ENSNLEG00000017826) #17	ENSNLEG00000018544	ENSNLEG00000033425	ENSNLEG00000017824	ENSNLEG00000026755 #18	FMNL3 (ENSNLEG00000017822) #20	ENSNLEG00000017820 #22	NCKAP5L (ENSNLEG00000017819) #24	BCDIN3D (ENSNLEG00000017818) #25	ENSNLEG00000029950	ENSNLEG00000029168	ENSNLEG00000017817 #29	AQP2 (ENSNLEG00000017815) #31	AQP6 (ENSNLEG00000017814) #33	RACGAP1 (ENSNLEG00000017810) #34	ASIC1 (ENSNLEG00000029021) #35	ENSNLEG00000031706	SMARCD1 (ENSNLEG00000017808) #36	GPD1 (ENSNLEG00000017806)	ENSNLEG00000017804	LIMA1 (ENSNLEG00000017802)	ENSNLEG00000017800
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.q #22	ENSGT00390000005534.b.b.c.b.b.a.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT00910000148021	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.q #22	ENSGT00390000005534.b.b.c.b.b.a.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000012132.c.a	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT00390000005534.b.b.c.b.b.a.b.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT01050000244940.a.a.q #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00910000147121	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Macaca	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.c.a	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT01050000244940.a.a.q #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a	ENSGT00940000158313	ENSGT00990000203730
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.c.a	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.q #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00800000124303.g	ENSGT00910000146814	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Rhesus	MODERN SPECIES	2	DHH (ENSMMUG00000012776)	LMBR1L (ENSMMUG00000012769)	TUBA1A (ENSMMUG00000021081)	TUBA1C (ENSMMUG00000009788)	PRPH (ENSMMUG00000031976)	TROAP (ENSMMUG00000007544)	C1QL4 (ENSMMUG00000007546)	DNAJC22 (ENSMMUG00000007548)	SPATS2 (ENSMMUG00000003762)	ENSMMUG00000049374	KCNH3 (ENSMMUG00000011097) #16	MCRS1 (ENSMMUG00000011098) #17	FAM186B (ENSMMUG00000022493)	PRPF40B (ENSMMUG00000022495) #18	FMNL3 (ENSMMUG00000022498) #20	TMBIM6 (ENSMMUG00000005960) #22	NCKAP5L (ENSMMUG00000006255) #24	FAIM2 (ENSMMUG00000022913) #29	AQP2 (ENSMMUG00000038256) #31	AQP5 (ENSMMUG00000058855) #32	AQP6 (ENSMMUG00000021688) #33	RACGAP1 (ENSMMUG00000021689) #34	ASIC1 (ENSMMUG00000006529) #35	SMARCD1 (ENSMMUG00000006531) #36	GPD1 (ENSMMUG00000006532)	ENSMMUG00000065304	CERS5 (ENSMMUG00000016471)	ENSMMUG00000004895	ENSMMUG00000051371	LARP4 (ENSMMUG00000008172)	DIP2B (ENSMMUG00000010565)
Crab-eating macaque	MODERN SPECIES	2	DHH (ENSMFAG00000051486)	TUBA1B (ENSMFAG00000035643)	ENSMFAG00000042144	PRPH (ENSMFAG00000050077)	TROAP (ENSMFAG00000021053)	C1QL4 (ENSMFAG00000002196)	DNAJC22 (ENSMFAG00000026632)	SPATS2 (ENSMFAG00000042319)	ENSMFAG00000054261	KCNH3 (ENSMFAG00000045110) #16	MCRS1 (ENSMFAG00000022915) #17	FAM186B (ENSMFAG00000000731)	PRPF40B (ENSMFAG00000035637) #18	FMNL3 (ENSMFAG00000042783) #20	ENSMFAG00000063822	ENSMFAG00000039689 #22	NCKAP5L (ENSMFAG00000031813) #24	BCDIN3D (ENSMFAG00000038249) #25	FAIM2 (ENSMFAG00000043955) #29	ENSMFAG00000050869	AQP2 (ENSMFAG00000042087) #31	AQP5 (ENSMFAG00000032827) #32	ENSMFAG00000064589	AQP6 (ENSMFAG00000003316) #33	RACGAP1 (ENSMFAG00000022656) #34	ASIC1 (ENSMFAG00000035165) #35	SMARCD1 (ENSMFAG00000000413) #36	GPD1 (ENSMFAG00000031489)	ENSMFAG00000061354	ENSMFAG00000063331	CERS5 (ENSMFAG00000043342)
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.q #22	ENSGT00390000005534.b.b.c.b.b.a.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT00910000148021	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.q #22	ENSGT00390000005534.b.b.c.b.b.a.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00910000147121	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Vervet Monkey	MODERN SPECIES	2	LMBR1L (ENSCSAG00000006161)	ENSCSAG00000006157	TUBA1A (ENSCSAG00000006153)	TUBA1C (ENSCSAG00000006152)	PRPH (ENSCSAG00000006146)	TROAP (ENSCSAG00000006131)	C1QL4 (ENSCSAG00000006121)	DNAJC22 (ENSCSAG00000006118)	SPATS2 (ENSCSAG00000006117)	KCNH3 (ENSCSAG00000006111) #16	MCRS1 (ENSCSAG00000006105) #17	FAM186B (ENSCSAG00000006099)	PRPF40B (ENSCSAG00000006083) #18	FMNL3 (ENSCSAG00000006061) #20	ENSCSAG00000019253	TMBIM6 (ENSCSAG00000006054) #22	NCKAP5L (ENSCSAG00000006051) #24	BCDIN3D (ENSCSAG00000006048) #25	FAIM2 (ENSCSAG00000006046) #29	AQP2 (ENSCSAG00000006042) #31	AQP5 (ENSCSAG00000006036) #32	AQP6 (ENSCSAG00000006032) #33	RACGAP1 (ENSCSAG00000006020) #34	ASIC1 (ENSCSAG00000005996) #35	SMARCD1 (ENSCSAG00000005990) #36	GPD1 (ENSCSAG00000005984)	COX14 (ENSCSAG00000019254)	CERS5 (ENSCSAG00000005979)	LIMA1 (ENSCSAG00000005975)	ENSCSAG00000005971	LARP4 (ENSCSAG00000005967)
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.c.a	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT00390000005534.b.b.c.b.b.a.b.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT01050000244940.a.a.q #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00910000147121	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.c.a	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT01050000244940.a.a.q #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a
Pig-tailed macaque	MODERN SPECIES	196	DHH (ENSMNEG00000033172)	LMBR1L (ENSMNEG00000029874)	TUBA1B (ENSMNEG00000031206)	TUBA1C (ENSMNEG00000000827)	PRPH (ENSMNEG00000033632)	TROAP (ENSMNEG00000039086)	C1QL4 (ENSMNEG00000043324)	DNAJC22 (ENSMNEG00000036498)	ENSMNEG00000037232	SPATS2 (ENSMNEG00000037739)	KCNH3 (ENSMNEG00000026566) #16	MCRS1 (ENSMNEG00000040429) #17	FAM186B (ENSMNEG00000031420)	PRPF40B (ENSMNEG00000033306) #18	FMNL3 (ENSMNEG00000045499) #20	ENSMNEG00000044447 #22	ENSMNEG00000040412	NCKAP5L (ENSMNEG00000030526) #24	BCDIN3D (ENSMNEG00000029191) #25	ENSMNEG00000031574	FAIM2 (ENSMNEG00000029516) #29	AQP2 (ENSMNEG00000038948) #31	AQP5 (ENSMNEG00000032433) #32	ENSMNEG00000034059	AQP6 (ENSMNEG00000044454) #33	RACGAP1 (ENSMNEG00000044161) #34	ASIC1 (ENSMNEG00000040991) #35	SMARCD1 (ENSMNEG00000044865) #36	GPD1 (ENSMNEG00000017038)	CERS5 (ENSMNEG00000006332)	LIMA1 (ENSMNEG00000045489)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.d	ENSGT00940000155969	ENSGT00390000012136	ENSGT00940000164600.b	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT00390000005534.b.b.c.b.b.a.b.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00910000147121	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT00390000002190
Olive baboon	MODERN SPECIES	19	LMBR1L (ENSPANG00000022414)	ENSPANG00000047303	ENSPANG00000038136	PRPH (ENSPANG00000014074)	ENSPANG00000012632	C1QL4 (ENSPANG00000010382)	DNAJC22 (ENSPANG00000000853)	ENSPANG00000051065	SPATS2 (ENSPANG00000000854)	KCNH3 (ENSPANG00000017210) #16	MCRS1 (ENSPANG00000017308) #17	FAM186B (ENSPANG00000005455)	PRPF40B (ENSPANG00000019843) #18	FMNL3 (ENSPANG00000015333) #20	ENSPANG00000033501	TMBIM6 (ENSPANG00000007284) #22	NCKAP5L (ENSPANG00000008378) #24	BCDIN3D (ENSPANG00000045726) #25	FAIM2 (ENSPANG00000034066) #29	AQP2 (ENSPANG00000013990) #31	AQP5 (ENSPANG00000005854) #32	AQP6 (ENSPANG00000047509) #33	RACGAP1 (ENSPANG00000018322) #34	ASIC1 (ENSPANG00000019747) #35	SMARCD1 (ENSPANG00000004051) #36	GPD1 (ENSPANG00000000381)	COX14 (ENSPANG00000039764)	CERS5 (ENSPANG00000015566)	LIMA1 (ENSPANG00000013989)	ENSPANG00000045646	LARP4 (ENSPANG00000022964)
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000160203	ENSGT00390000012132.d	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000018003.b.t	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT00390000005534.b.b.c.b.b.a.b.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00940000154978.i.a	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00910000147836	ENSGT00940000154610.e.b #34	ENSGT00910000147121	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a
Sooty mangabey	MODERN SPECIES	571	LMBR1L (ENSCATG00000012344)	TUBA1B (ENSCATG00000038328)	TUBA1C (ENSCATG00000031924)	PRPH (ENSCATG00000039831)	TROAP (ENSCATG00000043456)	C1QL4 (ENSCATG00000043584)	ENSCATG00000026332	SPATS2 (ENSCATG00000041816)	KCNH3 (ENSCATG00000031210) #16	MCRS1 (ENSCATG00000039134) #17	ENSCATG00000038897	FAM186B (ENSCATG00000031582)	PRPF40B (ENSCATG00000032444) #18	FMNL3 (ENSCATG00000039154) #20	ENSCATG00000031091	TMBIM6 (ENSCATG00000044300) #22	ENSCATG00000038799	NCKAP5L (ENSCATG00000035514) #24	BCDIN3D (ENSCATG00000044648) #25	ENSCATG00000044213	FAIM2 (ENSCATG00000035599) #29	AQP2 (ENSCATG00000035395) #31	AQP5 (ENSCATG00000029951) #32	ENSCATG00000036515	AQP6 (ENSCATG00000031304) #33	RACGAP1 (ENSCATG00000023977) #34	ENSCATG00000031613	ASIC1 (ENSCATG00000030053) #35	SMARCD1 (ENSCATG00000011963) #36	GPD1 (ENSCATG00000023693)	CERS5 (ENSCATG00000035482)
Drill	MODERN SPECIES	235							SPATS2 (ENSMLEG00000034492)	KCNH3 (ENSMLEG00000039389) #16	MCRS1 (ENSMLEG00000040697) #17	ENSMLEG00000012572	ENSMLEG00000041088	FAM186B (ENSMLEG00000031262)	PRPF40B (ENSMLEG00000043872) #18	FMNL3 (ENSMLEG00000043273) #20	ENSMLEG00000040896	TMBIM6 (ENSMLEG00000032936) #22	NCKAP5L (ENSMLEG00000010405) #24	BCDIN3D (ENSMLEG00000008159) #25	ENSMLEG00000039842	ENSMLEG00000026463	FAIM2 (ENSMLEG00000028759) #29	AQP2 (ENSMLEG00000039967) #31	AQP5 (ENSMLEG00000041250) #32	ENSMLEG00000037821	AQP6 (ENSMLEG00000035173) #33	RACGAP1 (ENSMLEG00000040110) #34	ENSMLEG00000028141	ASIC1 (ENSMLEG00000028142) #35	SMARCD1 (ENSMLEG00000030186) #36	GPD1 (ENSMLEG00000040740)	CERS5 (ENSMLEG00000044318)
Rhinopithecus	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00390000012136	ENSGT00390000001138.a	ENSGT00940000161742 #16	ENSGT00390000005536 #17	ENSGT00390000008918.a.a	ENSGT00390000001231.s.b	ENSGT00940000162031	ENSGT00930000150980.b #18	ENSGT00940000159962 #20	ENSGT00390000005534.b.b.c.b.b.a.b	ENSGT00390000005534.b.b.c.b.a.a.b.b	ENSGT01050000244940.a.a.r.a #22	ENSGT00530000063607.a #24	ENSGT00940000153993.B #25	ENSGT00910000146932	ENSGT00910000148021	ENSGT01050000244890.a.b.b #29	ENSGT00940000160612.d #31	ENSGT00940000161557.b #32	ENSGT00940000161949 #33	ENSGT00940000154610.e.b #34	ENSGT00910000147121	ENSGT00940000158414 #35	ENSGT00940000156629 #36	ENSGT00390000003114.e.a	ENSGT01030000234515.a.a.a	ENSGT00940000158313
Golden snub-nosed monkey	MODERN SPECIES	2523	TUBA1C (ENSRROG00000041724)	PRPH (ENSRROG00000027654)	TROAP (ENSRROG00000041094)	C1QL4 (ENSRROG00000036279)	DNAJC22 (ENSRROG00000042001)	ENSRROG00000006356	ENSRROG00000038041	KCNH3 (ENSRROG00000028605) #16	MCRS1 (ENSRROG00000028485) #17	ENSRROG00000036861	ENSRROG00000027777	FAM186B (ENSRROG00000036175)	PRPF40B (ENSRROG00000038175) #18	FMNL3 (ENSRROG00000018538) #20	ENSRROG00000030743	TMBIM6 (ENSRROG00000031501) #22	NCKAP5L (ENSRROG00000040594) #24	BCDIN3D (ENSRROG00000024941) #25	ENSRROG00000035778	ENSRROG00000027078	ENSRROG00000000081	FAIM2 (ENSRROG00000030595) #29	AQP2 (ENSRROG00000004857) #31	AQP5 (ENSRROG00000031086) #32	AQP6 (ENSRROG00000006046) #33	RACGAP1 (ENSRROG00000007543) #34	ENSRROG00000041449	ASIC1 (ENSRROG00000034828) #35	SMARCD1 (ENSRROG00000020699) #36	GPD1 (ENSRROG00000045156)	CERS5 (ENSRROG00000011401)
Black snub-nosed monkey	MODERN SPECIES	1192	LMBR1L (ENSRBIG00000042873)	ENSRBIG00000026839	PRPH (ENSRBIG00000042471)	TROAP (ENSRBIG00000000994)	C1QL4 (ENSRBIG00000022087)	DNAJC22 (ENSRBIG00000031682)	SPATS2 (ENSRBIG00000007432)	KCNH3 (ENSRBIG00000037355) #16	MCRS1 (ENSRBIG00000028211) #17	ENSRBIG00000032617	FAM186B (ENSRBIG00000038322)	ENSRBIG00000032874	PRPF40B (ENSRBIG00000029835) #18	FMNL3 (ENSRBIG00000037436) #20	ENSRBIG00000035858	ENSRBIG00000036311 #22	NCKAP5L (ENSRBIG00000044175) #24	BCDIN3D (ENSRBIG00000044388) #25	ENSRBIG00000035252	ENSRBIG00000039418	FAIM2 (ENSRBIG00000038836) #29	AQP2 (ENSRBIG00000040477) #31	AQP5 (ENSRBIG00000005194) #32	AQP6 (ENSRBIG00000034983) #33	RACGAP1 (ENSRBIG00000018375) #34	ENSRBIG00000036752	ASIC1 (ENSRBIG00000029596) #35	SMARCD1 (ENSRBIG00000042505) #36	GPD1 (ENSRBIG00000042609)	CERS5 (ENSRBIG00000030523)
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Macaca	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Pig-tailed macaque	MODERN SPECIES	341	ADD2 (ENSMNEG00000038457)	FIGLA (ENSMNEG00000040951)	CLEC4F (ENSMNEG00000032808)	ENSMNEG00000043667	CD207 (ENSMNEG00000001429)	VAX2 (ENSMNEG00000028742)	ATP6V1B1 (ENSMNEG00000045299)	ANKRD53 (ENSMNEG00000034946)	TEX261 (ENSMNEG00000003947)	NAGK (ENSMNEG00000001946)	ENSMNEG00000043964	MPHOSPH10 (ENSMNEG00000043591)	PAIP2B (ENSMNEG00000028146)	ZNF638 (ENSMNEG00000028987)	DYSF (ENSMNEG00000039503)	ENSMNEG00000041639 #22	ENSMNEG00000008309	CYP26B1 (ENSMNEG00000037957)	ENSMNEG00000021497	EXOC6B (ENSMNEG00000033540)	SPR (ENSMNEG00000031794)	EMX1 (ENSMNEG00000031712)	SFXN5 (ENSMNEG00000041349)	RAB11FIP5 (ENSMNEG00000032292)	NOTO (ENSMNEG00000034604)	SMYD5 (ENSMNEG00000044171)	PRADC1 (ENSMNEG00000043405)	CCT7 (ENSMNEG00000040196)	FBXO41 (ENSMNEG00000044980)	EGR4 (ENSMNEG00000041602)	ENSMNEG00000029508
Macaca_a	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000042972	ENSMFAG00000044940	ADD2 (ENSMFAG00000037883)	FIGLA (ENSMFAG00000043252)	CLEC4F (ENSMFAG00000002173)	CD207 (ENSMFAG00000002023)	VAX2 (ENSMFAG00000038576)	ATP6V1B1 (ENSMFAG00000042374)	ANKRD53 (ENSMFAG00000031224)	TEX261 (ENSMFAG00000041883)	NAGK (ENSMFAG00000043524)	ENSMFAG00000038402	MPHOSPH10 (ENSMFAG00000039444)	PAIP2B (ENSMFAG00000027132)	ZNF638 (ENSMFAG00000034359)	ENSMFAG00000018634 #22	DYSF (ENSMFAG00000032232)	CYP26B1 (ENSMFAG00000039784)	EXOC6B (ENSMFAG00000032926)	ENSMFAG00000001840	SPR (ENSMFAG00000041573)	ENSMFAG00000003754	SFXN5 (ENSMFAG00000000876)	RAB11FIP5 (ENSMFAG00000026056)	ENSMFAG00000050657	NOTO (ENSMFAG00000054075)	SMYD5 (ENSMFAG00000000968)	PRADC1 (ENSMFAG00000043171)	CCT7 (ENSMFAG00000039286)	FBXO41 (ENSMFAG00000042911)	EGR4 (ENSMFAG00000051388)
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT01050000244940.a.a.r.b #22
Black snub-nosed monkey	MODERN SPECIES	1186								KCNJ6 (ENSRBIG00000039466)	DYRK1A (ENSRBIG00000044558)	VPS26C (ENSRBIG00000031672)	ENSRBIG00000033842	ENSRBIG00000005142	TTC3 (ENSRBIG00000044668)	PIGP (ENSRBIG00000036738)	RIPPLY3 (ENSRBIG00000033745)	ENSRBIG00000028452 #22	HLCS (ENSRBIG00000040559)	SIM2 (ENSRBIG00000037240)	CLDN14 (ENSRBIG00000011059)	CHAF1B (ENSRBIG00000017497)
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000154409.c	ENSGT00940000163376	ENSGT00940000158313	ENSGT01030000234515.a.a.a	ENSGT00390000002190	ENSGT00390000003114.e.a	ENSGT00940000156629.r #36	ENSGT00940000158414 #35	ENSGT00940000154610.e.b #34	ENSGT00940000161949 #33	ENSGT00940000161557.b #32	ENSGT00940000160612.d #31	ENSGT01050000244890.a.b.b #29	ENSGT00940000153993.B #25	ENSGT00530000063607.a #24	ENSGT01050000244940.a.a #22	ENSGT00940000159962 #20	ENSGT00930000150980.b #18	ENSGT00940000162031	ENSGT00390000005536.e #17	ENSGT00940000161742 #16	ENSGT00390000001138.a	ENSGT00390000012136	ENSGT00940000155969	ENSGT00390000012132	ENSGT00940000160203	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00390000007809.a	ENSGT00940000161132
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000154409.c	ENSGT00940000163376	ENSGT00940000158313	ENSGT01030000234515.a.a.a	ENSGT00390000002190	ENSGT00390000003114.e.a	ENSGT00940000156629.r #36	ENSGT00940000158414 #35	ENSGT00940000154610.e.b #34	ENSGT00940000161949 #33	ENSGT00940000161557.b #32	ENSGT00940000160612.d #31	ENSGT01050000244890.a.b.b #29	ENSGT00940000153993.B #25	ENSGT00530000063607.a #24	ENSGT01050000244940.a.a #22	ENSGT00940000159962 #20	ENSGT00930000150980.b #18	ENSGT00940000162031	ENSGT00390000005536.e #17	ENSGT00940000161742 #16	ENSGT00390000001138.a	ENSGT00390000012136	ENSGT00940000155969	ENSGT00390000012132	ENSGT00940000160203	ENSGT00940000154457.a.b ##14	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00950000182997.a.b.b.b	ENSGT00940000154409.c	ENSGT00940000163376	ENSGT00940000158313	ENSGT01030000234515.a.a.a	ENSGT00390000003114.e.a	ENSGT00940000156629.r #36	ENSGT00940000158414 #35	ENSGT00940000154610.e.b #34	ENSGT00940000161949 #33	ENSGT00940000161557.b #32	ENSGT00940000160612.d #31	ENSGT01050000244890.a.b.b #29	ENSGT00940000153993.B #25	ENSGT00530000063607.a #24	ENSGT01050000244940.a.a #22	ENSGT00940000159962 #20	ENSGT00930000150980.b #18	ENSGT00940000162031	ENSGT00390000005536.e #17	ENSGT00940000161742 #16	ENSGT00390000001138.a	ENSGT00390000012136	ENSGT00940000155969	ENSGT00390000012132	ENSGT00940000160203	ENSGT00940000154457.a.b ##14	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00940000154457.a.a ##14	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a
Bolivian squirrel monkey	MODERN SPECIES	153	LARP4 (ENSSBOG00000026650)	FAM186A (ENSSBOG00000020587)	ENSSBOG00000021850	LIMA1 (ENSSBOG00000004806)	CERS5 (ENSSBOG00000034177)	GPD1 (ENSSBOG00000001677)	SMARCD1 (ENSSBOG00000014040) #36	ASIC1 (ENSSBOG00000034628) #35	RACGAP1 (ENSSBOG00000026138) #34	AQP6 (ENSSBOG00000035612) #33	AQP5 (ENSSBOG00000030707) #32	AQP2 (ENSSBOG00000026086) #31	FAIM2 (ENSSBOG00000020121) #29	BCDIN3D (ENSSBOG00000035511) #25	NCKAP5L (ENSSBOG00000028145) #24	TMBIM6 (ENSSBOG00000024527) #22	FMNL3 (ENSSBOG00000026511) #20	PRPF40B (ENSSBOG00000025670) #18	ENSSBOG00000027018	FAM186B (ENSSBOG00000016980)	ENSSBOG00000036027 #17	KCNH3 (ENSSBOG00000027569) #16	SPATS2 (ENSSBOG00000023909)	DNAJC22 (ENSSBOG00000033980)	C1QL4 (ENSSBOG00000033432)	TROAP (ENSSBOG00000034178)	PRPH (ENSSBOG00000032145)	ENSSBOG00000005771 ##14	TUBA1B (ENSSBOG00000022158)	ENSSBOG00000028238 ##14	LMBR1L (ENSSBOG00000023418)
Capuchin	MODERN SPECIES	181	DIP2B (ENSCCAG00000033298)	LARP4 (ENSCCAG00000024439)	FAM186A (ENSCCAG00000030948)	LIMA1 (ENSCCAG00000020365)	CERS5 (ENSCCAG00000033001)	GPD1 (ENSCCAG00000029995)	SMARCD1 (ENSCCAG00000033779) #36	ASIC1 (ENSCCAG00000030999) #35	RACGAP1 (ENSCCAG00000036642) #34	AQP6 (ENSCCAG00000035363) #33	AQP5 (ENSCCAG00000028095) #32	AQP2 (ENSCCAG00000021499) #31	FAIM2 (ENSCCAG00000035820) #29	BCDIN3D (ENSCCAG00000029244) #25	NCKAP5L (ENSCCAG00000031139) #24	TMBIM6 (ENSCCAG00000035742) #22	FMNL3 (ENSCCAG00000016612) #20	PRPF40B (ENSCCAG00000030147) #18	ENSCCAG00000005419	FAM186B (ENSCCAG00000035626)	MCRS1 (ENSCCAG00000035719) #17	KCNH3 (ENSCCAG00000029024) #16	SPATS2 (ENSCCAG00000000044)	DNAJC22 (ENSCCAG00000004115)	C1QL4 (ENSCCAG00000026057)	TROAP (ENSCCAG00000036621)	PRPH (ENSCCAG00000033705)	ENSCCAG00000032756 ##14	ENSCCAG00000032130	ENSCCAG00000036239	LMBR1L (ENSCCAG00000034639)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	21	LARP4 (ENSCJAG00000021131)	ENSCJAG00000021122	LIMA1 (ENSCJAG00000021115)	ENSCJAG00000038932	CERS5 (ENSCJAG00000039684)	COX14 (ENSCJAG00000072013)	GPD1 (ENSCJAG00000021089)	SMARCD1 (ENSCJAG00000021079) #36	ASIC1 (ENSCJAG00000021071) #35	RACGAP1 (ENSCJAG00000021058) #34	AQP6 (ENSCJAG00000021055) #33	AQP5 (ENSCJAG00000070257) #32	AQP2 (ENSCJAG00000021049) #31	FAIM2 (ENSCJAG00000021045) #29	NCKAP5L (ENSCJAG00000046299) #24	ENSCJAG00000021032 #22	FMNL3 (ENSCJAG00000021023) #20	PRPF40B (ENSCJAG00000020982) #18	ENSCJAG00000085278	FAM186B (ENSCJAG00000020977)	MCRS1 (ENSCJAG00000020935) #17	KCNH3 (ENSCJAG00000020923) #16	SPATS2 (ENSCJAG00000020920)	ENSCJAG00000074245 ##26	DNAJC22 (ENSCJAG00000020919)	C1QL4 (ENSCJAG00000047886)	TROAP (ENSCJAG00000020910)	PRPH (ENSCJAG00000020904)	TUBA1C (ENSCJAG00000075171)	TUBA1A (ENSCJAG00000071730)	TUBA1B (ENSCJAG00000086136)
Marmoset	MODERN SPECIES		ENSCJAG00000081793	KLHL1 (ENSCJAG00000016532)	ENSCJAG00000079366	ENSCJAG00000021951	ENSCJAG00000075923	ENSCJAG00000062136	PCDH9 (ENSCJAG00000016402)	ENSCJAG00000078739	ENSCJAG00000078229	ENSCJAG00000085595	ENSCJAG00000075877	PCDH20 (ENSCJAG00000016415)	ENSCJAG00000076988	TDRD3 (ENSCJAG00000003853)	ENSCJAG00000081668	ENSCJAG00000052430 #22	DIAPH3 (ENSCJAG00000003729)	ENSCJAG00000056633	ENSCJAG00000073048	ENSCJAG00000071873	ENSCJAG00000085937	ENSCJAG00000071744	PCDH17 (ENSCJAG00000003715)	ENSCJAG00000083356	ENSCJAG00000080780	ENSCJAG00000003713	OLFM4 (ENSCJAG00000003690)	PCDH8 (ENSCJAG00000045669)	CNMD (ENSCJAG00000003648)	ENSCJAG00000003604	ENSCJAG00000083123
Mas night monkey	MODERN SPECIES	1029	LARP4 (ENSANAG00000029342)	ENSANAG00000020925	ENSANAG00000036201	LIMA1 (ENSANAG00000034316)	CERS5 (ENSANAG00000034838)	GPD1 (ENSANAG00000024396)	ENSANAG00000026495 #36	ASIC1 (ENSANAG00000027378) #35	RACGAP1 (ENSANAG00000036327) #34	AQP6 (ENSANAG00000022283) #33	AQP5 (ENSANAG00000034159) #32	AQP2 (ENSANAG00000027846) #31	FAIM2 (ENSANAG00000027329) #29	BCDIN3D (ENSANAG00000038086) #25	NCKAP5L (ENSANAG00000024395) #24	TMBIM6 (ENSANAG00000025342) #22	FMNL3 (ENSANAG00000034262) #20	PRPF40B (ENSANAG00000029854) #18	ENSANAG00000035924	CYBRD1 (ENSANAG00000034554)	MCRS1 (ENSANAG00000028338) #17	KCNH3 (ENSANAG00000038260) #16	SPATS2 (ENSANAG00000027245)	DNAJC22 (ENSANAG00000020815)	C1QL4 (ENSANAG00000022430)	TROAP (ENSANAG00000032177)	PRPH (ENSANAG00000026976)	TUBA1C (ENSANAG00000031279)	TUBA1A (ENSANAG00000034955)	ENSANAG00000028464	LMBR1L (ENSANAG00000038013)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	2337																ENSTSYG00000033124 #22	ENSTSYG00000001141
Tarsier	MODERN SPECIES	5151																TMBIM6 (ENSTSYG00000030688) #22	NCKAP5L (ENSTSYG00000027065) #24	BCDIN3D (ENSTSYG00000001190) #25	FAIM2 (ENSTSYG00000014045) #29	AQP2 (ENSTSYG00000026687) #31	AQP5 (ENSTSYG00000029641) #32	AQP6 (ENSTSYG00000031893) #33	RACGAP1 (ENSTSYG00000007197) #34	ASIC1 (ENSTSYG00000027151) #35	SMARCD1 (ENSTSYG00000001906) #36	GPD1 (ENSTSYG00000026461)	CERS5 (ENSTSYG00000007489)	LIMA1 (ENSTSYG00000001948)