Mus	ANCESTRAL SPECIES	11	ENSGT00940000161132 #8	ENSGT00390000007809.a #9	ENSGT00950000182825.A.a.b.a.b.a.b.b #11	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##12	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #12	ENSGT00940000160203	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #19	ENSGT00930000150980.b #20	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00860000135898 #31	ENSGT00940000156629 #32	ENSGT00390000003114.e.a #33	ENSGT00390000002190 #34	ENSGT01030000234515.a.a.a #35	ENSGT00940000158313 #36	ENSGT00940000163376 #37
Shrew mouse	MODERN SPECIES	8	Rhebl1 (MGP_PahariEiJ_G0020253) #7	Dhh (MGP_PahariEiJ_G0020254) #8	Lmbr1l (MGP_PahariEiJ_G0020255) #9	MGP_PahariEiJ_G0020257 #10	MGP_PahariEiJ_G0020256 #11	MGP_PahariEiJ_G0020258 #12	Troap (MGP_PahariEiJ_G0020259) #13	C1ql4 (MGP_PahariEiJ_G0020260) #14	Dnajc22 (MGP_PahariEiJ_G0020261) #15	Spats2 (MGP_PahariEiJ_G0020262) #16	Kcnh3 (MGP_PahariEiJ_G0020263) #17	Mcrs1 (MGP_PahariEiJ_G0020264) #18	Fam186b (MGP_PahariEiJ_G0020265) #19	Prpf40b (MGP_PahariEiJ_G0020266) #20	Fmnl3 (MGP_PahariEiJ_G0020267) #21	Tmbim6 (MGP_PahariEiJ_G0020268) #22	Nckap5l (MGP_PahariEiJ_G0020269) #23	Bcdin3d (MGP_PahariEiJ_G0020270) #24	Faim2 (MGP_PahariEiJ_G0020271) #25	Aqp2 (MGP_PahariEiJ_G0020272) #26	Aqp5 (MGP_PahariEiJ_G0020273) #27	Aqp6 (MGP_PahariEiJ_G0020274) #28	Racgap1 (MGP_PahariEiJ_G0020275) #29	MGP_PahariEiJ_G0020276 #30	MGP_PahariEiJ_G0020277 #31	Smarcd1 (MGP_PahariEiJ_G0020278) #32	Gpd1 (MGP_PahariEiJ_G0020279) #33	Cox14 (MGP_PahariEiJ_G0020280) #34	Cers5 (MGP_PahariEiJ_G0020281) #35	Lima1 (MGP_PahariEiJ_G0020282) #36	MGP_PahariEiJ_G0020283 #37
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000161665 #7	ENSGT00940000161132 #8	ENSGT00390000007809.a #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #12	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##12	ENSGT00940000160203	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #19	ENSGT00930000150980.b #20	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00860000135898 #31	ENSGT00940000156629 #32	ENSGT00390000003114.e.a #33	ENSGT00390000002190 #34	ENSGT01030000234515.a.a.a #35	ENSGT00940000158313 #36	ENSGT00940000163376 #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000161665 #7	ENSGT00940000161132 #8	ENSGT00390000007809.a #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #12	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##12	ENSGT00940000160203	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #19	ENSGT00930000150980.b #20	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00860000135898 #31	ENSGT00940000156629 #32	ENSGT00390000003114.e.a #33	ENSGT00390000002190 #34	ENSGT01030000234515.a.a.a #35	ENSGT00940000158313 #36	ENSGT00940000163376 #37
Mouse	MODERN SPECIES	6	Lmbr1l (ENSMUSG00000022999) #9	Tuba1b (ENSMUSG00000023004) #12	Gm49450 (ENSMUSG00000116358)	Tuba1a (ENSMUSG00000072235) ##12	Tuba1c (ENSMUSG00000043091) #12	Prph (ENSMUSG00000023484)	Troap (ENSMUSG00000032783) #13	C1ql4 (ENSMUSG00000001076) #14	Dnajc22 (ENSMUSG00000038009) #15	Spats2 (ENSMUSG00000051934) #16	Kcnh3 (ENSMUSG00000037579) #17	Mcrs1 (ENSMUSG00000037570) #18	Fam186b (ENSMUSG00000078907) #19	Prpf40b (ENSMUSG00000023007) #20	Fmnl3 (ENSMUSG00000023008) #21	Tmbim6 (ENSMUSG00000023010) #22	Nckap5l (ENSMUSG00000023009) #23	Bcdin3d (ENSMUSG00000037525) #24	Faim2 (ENSMUSG00000023011) #25	Aqp2 (ENSMUSG00000023013) #26	Aqp5 (ENSMUSG00000044217) #27	Aqp6 (ENSMUSG00000043144) #28	Racgap1 (ENSMUSG00000023015) #29	Asic1 (ENSMUSG00000023017) #30	Smarcd1 (ENSMUSG00000023018) #32	Gpd1 (ENSMUSG00000023019) #33	Cox14 (ENSMUSG00000023020) #34	Cers5 (ENSMUSG00000023021) #35	Lima1 (ENSMUSG00000023022) #36	Fam186a (ENSMUSG00000045350) #37	Larp4 (ENSMUSG00000023025)
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000161665 #7	ENSGT00940000161132 #8	ENSGT00390000007809.a #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #12	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##12	ENSGT00940000160203	ENSGT00390000012132 #13	ENSGT00940000155969 #14	ENSGT00390000012136 #15	ENSGT00390000001138.a #16	ENSGT00940000161742 #17	ENSGT00390000005536 #18	ENSGT00940000162031 #19	ENSGT00930000150980.b #20	ENSGT00940000159962 #21	ENSGT01050000244940.a.a #22	ENSGT00530000063607.a #23	ENSGT00940000153993.B #24	ENSGT01050000244890.a.b.b #25	ENSGT00940000160612.d #26	ENSGT00940000161557.b #27	ENSGT00940000161949 #28	ENSGT00940000154610.e.b #29	ENSGT00940000158414 #30	ENSGT00860000135898 #31	ENSGT00940000156629 #32	ENSGT00390000003114.e.a #33	ENSGT00390000002190 #34	ENSGT01030000234515.a.a.a #35	ENSGT00940000158313 #36	ENSGT00940000163376 #37
spretus	MODERN SPECIES	6	Prkag1 (MGP_SPRETEiJ_G0021145)	Kmt2d (MGP_SPRETEiJ_G0021146)	Rhebl1 (MGP_SPRETEiJ_G0021147) #7	Dhh (MGP_SPRETEiJ_G0021148) #8	Lmbr1l (MGP_SPRETEiJ_G0021149) #9	Prph (MGP_SPRETEiJ_G0021150)	Troap (MGP_SPRETEiJ_G0021151) #13	C1ql4 (MGP_SPRETEiJ_G0021152) #14	Dnajc22 (MGP_SPRETEiJ_G0021153) #15	Spats2 (MGP_SPRETEiJ_G0021154) #16	Kcnh3 (MGP_SPRETEiJ_G0021155) #17	Mcrs1 (MGP_SPRETEiJ_G0021156) #18	Fam186b (MGP_SPRETEiJ_G0021157) #19	Prpf40b (MGP_SPRETEiJ_G0021158) #20	Fmnl3 (MGP_SPRETEiJ_G0021159) #21	Tmbim6 (MGP_SPRETEiJ_G0021160) #22	Nckap5l (MGP_SPRETEiJ_G0021161) #23	Bcdin3d (MGP_SPRETEiJ_G0021162) #24	Faim2 (MGP_SPRETEiJ_G0021163) #25	Aqp2 (MGP_SPRETEiJ_G0021164) #26	Aqp5 (MGP_SPRETEiJ_G0021165) #27	Aqp6 (MGP_SPRETEiJ_G0021166) #28	Racgap1 (MGP_SPRETEiJ_G0021167) #29	MGP_SPRETEiJ_G0021168 #30	MGP_SPRETEiJ_G0021169 #31	Smarcd1 (MGP_SPRETEiJ_G0021170) #32	Gpd1 (MGP_SPRETEiJ_G0021171) #33	Cox14 (MGP_SPRETEiJ_G0021172) #34	Cers5 (MGP_SPRETEiJ_G0021173) #35	Lima1 (MGP_SPRETEiJ_G0021174) #36	MGP_SPRETEiJ_G0021175 #37
Steppe mouse	MODERN SPECIES	3092	Lmbr1l (ENSMSIG00000002200) #9	ENSMSIG00000002356 #12	Tuba1a (ENSMSIG00000002382) ##12	Tuba1c (ENSMSIG00000002410) #12	Prph (ENSMSIG00000002429)	Troap (ENSMSIG00000002521) #13	C1ql4 (ENSMSIG00000002578) #14	Dnajc22 (ENSMSIG00000002606) #15	ENSMSIG00000002617	Spats2 (ENSMSIG00000002634) #16	Kcnh3 (ENSMSIG00000002698) #17	ENSMSIG00000002780 #18	Fam186b (ENSMSIG00000002892) #19	Prpf40b (ENSMSIG00000002935) #20	Fmnl3 (ENSMSIG00000003188) #21	Tmbim6 (ENSMSIG00000003395) #22	Nckap5l (ENSMSIG00000003444) #23	Bcdin3d (ENSMSIG00000003506) #24	Faim2 (ENSMSIG00000003522) #25	ENSMSIG00000003581	Aqp2 (ENSMSIG00000003609) #26	Aqp5 (ENSMSIG00000003629) #27	Aqp6 (ENSMSIG00000003673) #28	Racgap1 (ENSMSIG00000003707) #29	ENSMSIG00000003836 #30
Ryukyu mouse	MODERN SPECIES	6	Rhebl1 (MGP_CAROLIEiJ_G0020250) #7	Dhh (MGP_CAROLIEiJ_G0020251) #8	Lmbr1l (MGP_CAROLIEiJ_G0020252) #9	MGP_CAROLIEiJ_G0020253 #12	MGP_CAROLIEiJ_G0020254	Prph (MGP_CAROLIEiJ_G0020255)	Troap (MGP_CAROLIEiJ_G0020256) #13	C1ql4 (MGP_CAROLIEiJ_G0020257) #14	Dnajc22 (MGP_CAROLIEiJ_G0020258) #15	Spats2 (MGP_CAROLIEiJ_G0020259) #16	Kcnh3 (MGP_CAROLIEiJ_G0020260) #17	Mcrs1 (MGP_CAROLIEiJ_G0020261) #18	Fam186b (MGP_CAROLIEiJ_G0020262) #19	Prpf40b (MGP_CAROLIEiJ_G0020263) #20	Fmnl3 (MGP_CAROLIEiJ_G0020264) #21	Tmbim6 (MGP_CAROLIEiJ_G0020265) #22	Nckap5l (MGP_CAROLIEiJ_G0020266) #23	Bcdin3d (MGP_CAROLIEiJ_G0020267) #24	Faim2 (MGP_CAROLIEiJ_G0020268) #25	Aqp2 (MGP_CAROLIEiJ_G0020269) #26	Aqp5 (MGP_CAROLIEiJ_G0020270) #27	Aqp6 (MGP_CAROLIEiJ_G0020271) #28	Racgap1 (MGP_CAROLIEiJ_G0020272) #29	MGP_CAROLIEiJ_G0020273 #30	MGP_CAROLIEiJ_G0020274 #31	Smarcd1 (MGP_CAROLIEiJ_G0020275) #32	Gpd1 (MGP_CAROLIEiJ_G0020276) #33	Cox14 (MGP_CAROLIEiJ_G0020277) #34	Cers5 (MGP_CAROLIEiJ_G0020278) #35	Lima1 (MGP_CAROLIEiJ_G0020279) #36	MGP_CAROLIEiJ_G0020280