Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 Primates ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b.l ENSGT01030000234551.k.d.b.a.a.a.b.b.b.k ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Lemuriformes_a ANCESTRAL SPECIES 194 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Greater bamboo lemur MODERN SPECIES 36 ENSPSMG00000006107 #16 PRKD1 (ENSPSMG00000006073) #17 G2E3 (ENSPSMG00000005984) #18 SCFD1 (ENSPSMG00000005912) #19 COCH (ENSPSMG00000005691) #20 STRN3 (ENSPSMG00000005578) #21 AP4S1 (ENSPSMG00000005555) #22 HECTD1 (ENSPSMG00000005480) #23 HEATR5A (ENSPSMG00000005428) #24 DTD2 (ENSPSMG00000005383) #25 GPR33 (ENSPSMG00000005379) #26 NUBPL (ENSPSMG00000005363) #27 ARHGAP5 (ENSPSMG00000005335) #28 Coquerels sifaka MODERN SPECIES 389 ENSPCOG00000016209 PRKD1 (ENSPCOG00000006865) #17 G2E3 (ENSPCOG00000015511) #18 SCFD1 (ENSPCOG00000025558) #19 ENSPCOG00000012773 COCH (ENSPCOG00000023301) #20 STRN3 (ENSPCOG00000001434) #21 AP4S1 (ENSPCOG00000016646) #22 ENSPCOG00000028456 HECTD1 (ENSPCOG00000020200) #23 HEATR5A (ENSPCOG00000022777) #24 DTD2 (ENSPCOG00000017568) #25 NUBPL (ENSPCOG00000022890) #27 ENSPCOG00000015979 ARHGAP5 (ENSPCOG00000024862) #28 AKAP6 (ENSPCOG00000013700) NPAS3 (ENSPCOG00000020941) ENSPCOG00000015194 SPTSSA (ENSPCOG00000027257) EAPP (ENSPCOG00000021389) Mouse lemur MODERN SPECIES 22 CMA1 (ENSMICG00000014279) ENSMICG00000045482 CTSG (ENSMICG00000030692) MYH6 (ENSMICG00000045811) DHRS2 (ENSMICG00000044785) ENSMICG00000010090 ENSMICG00000027192 ENSMICG00000017194 STXBP6 (ENSMICG00000035834) NOVA1 (ENSMICG00000034677) PRKD1 (ENSMICG00000001016) #17 G2E3 (ENSMICG00000014597) #18 SCFD1 (ENSMICG00000004149) #19 COCH (ENSMICG00000003344) #20 STRN3 (ENSMICG00000026845) #21 AP4S1 (ENSMICG00000003359) #22 HECTD1 (ENSMICG00000034057) #23 HEATR5A (ENSMICG00000007619) #24 DTD2 (ENSMICG00000030584) #25 ENSMICG00000027167 NUBPL (ENSMICG00000034340) #27 ARHGAP5 (ENSMICG00000007275) #28 AKAP6 (ENSMICG00000027865) NPAS3 (ENSMICG00000031841) EGLN3 (ENSMICG00000000618) ENSMICG00000047011 ENSMICG00000032213 SPTSSA (ENSMICG00000046623) EAPP (ENSMICG00000044807) KTN1 (ENSMICG00000032329) TBPL2 (ENSMICG00000000943) Bushbaby MODERN SPECIES 167 STXBP6 (ENSOGAG00000011211) NOVA1 (ENSOGAG00000025938) FOXG1 (ENSOGAG00000029149) #16 PRKD1 (ENSOGAG00000002966) #17 G2E3 (ENSOGAG00000017094) #18 SCFD1 (ENSOGAG00000017096) #19 COCH (ENSOGAG00000004695) #20 STRN3 (ENSOGAG00000004698) #21 AP4S1 (ENSOGAG00000004703) #22 HEATR5A (ENSOGAG00000013052) #24 DTD2 (ENSOGAG00000013060) #25 NUBPL (ENSOGAG00000011550) #27 ARHGAP5 (ENSOGAG00000029734) #28 AKAP6 (ENSOGAG00000001808) NPAS3 (ENSOGAG00000014886) EGLN3 (ENSOGAG00000014893) ENSOGAG00000001254 SPTSSA (ENSOGAG00000030285) EAPP (ENSOGAG00000012492) SNX6 (ENSOGAG00000008020) CFL2 (ENSOGAG00000032321) BAZ1A (ENSOGAG00000002234) ENSOGAG00000031729 SRP54 (ENSOGAG00000012188) Haplorrhini ANCESTRAL SPECIES 12 ENSGT00940000162110 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 Tarsier MODERN SPECIES 7074 COCH (ENSTSYG00000000628) #20 STRN3 (ENSTSYG00000000630) #21 AP4S1 (ENSTSYG00000009655) #22 HECTD1 (ENSTSYG00000009661) #23 ENSTSYG00000035488 ENSTSYG00000006884 #24 ENSTSYG00000029203 Simiiformes ANCESTRAL SPECIES 2 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Catarrhini ANCESTRAL SPECIES 9 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Hominoidea ANCESTRAL SPECIES 12 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Gibbon MODERN SPECIES 14 SDR39U1 (ENSNLEG00000015526) CMA1 (ENSNLEG00000015539) CTSG (ENSNLEG00000035806) GZMH (ENSNLEG00000015576) ENSNLEG00000015562 STXBP6 (ENSNLEG00000031616) ENSNLEG00000034166 NOVA1 (ENSNLEG00000033958) PRKD1 (ENSNLEG00000015603) #17 G2E3 (ENSNLEG00000015614) #18 ENSNLEG00000031681 SCFD1 (ENSNLEG00000015659) #19 ENSNLEG00000028472 COCH (ENSNLEG00000015841) #20 STRN3 (ENSNLEG00000015856) #21 ENSNLEG00000015901 #22 HECTD1 (ENSNLEG00000015912) #23 HEATR5A (ENSNLEG00000015975) #24 ENSNLEG00000027180 ACOT4 (ENSNLEG00000016052) ENSNLEG00000030750 DNAL1 (ENSNLEG00000016062) PNMA1 (ENSNLEG00000016068) ENSNLEG00000033162 MIDEAS (ENSNLEG00000016069) PTGR2 (ENSNLEG00000016076) ZNF410 (ENSNLEG00000016090) FAM161B (ENSNLEG00000016114) COQ6 (ENSNLEG00000016122) ENTPD5 (ENSNLEG00000016159) BBOF1 (ENSNLEG00000016175) Hominidae ANCESTRAL SPECIES 14 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Orangutan MODERN SPECIES 5 CBLN3 (ENSPPYG00000005706) KHNYN (ENSPPYG00000005708) SDR39U1 (ENSPPYG00000031348) CMA1 (ENSPPYG00000005709) CTSG (ENSPPYG00000005710) GZMH (ENSPPYG00000005711) GZMB (ENSPPYG00000005712) STXBP6 (ENSPPYG00000005713) NOVA1 (ENSPPYG00000031227) ENSPPYG00000030410 PRKD1 (ENSPPYG00000005718) #17 G2E3 (ENSPPYG00000005719) #18 SCFD1 (ENSPPYG00000005720) #19 COCH (ENSPPYG00000005721) #20 STRN3 (ENSPPYG00000005722) #21 ENSPPYG00000005723 #22 HECTD1 (ENSPPYG00000005724) #23 HEATR5A (ENSPPYG00000005725) #24 DTD2 (ENSPPYG00000036770) #25 NUBPL (ENSPPYG00000005727) #27 ARHGAP5 (ENSPPYG00000005729) #28 AKAP6 (ENSPPYG00000005730) NPAS3 (ENSPPYG00000005731) EGLN3 (ENSPPYG00000005732) SPTSSA (ENSPPYG00000005733) EAPP (ENSPPYG00000005735) SNX6 (ENSPPYG00000005736) CFL2 (ENSPPYG00000005737) BAZ1A (ENSPPYG00000005738) SRP54 (ENSPPYG00000005739) FAM177A1 (ENSPPYG00000005740) Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Gorilla MODERN SPECIES 5 CTSG (ENSGGOG00000013780) GZMH (ENSGGOG00000012428) GZMB (ENSGGOG00000012986) STXBP6 (ENSGGOG00000005321) ENSGGOG00000038355 NOVA1 (ENSGGOG00000016495) ENSGGOG00000009355 PRKD1 (ENSGGOG00000011852) #17 G2E3 (ENSGGOG00000001924) #18 ENSGGOG00000036427 SCFD1 (ENSGGOG00000011007) #19 ENSGGOG00000024446 COCH (ENSGGOG00000025198) #20 ENSGGOG00000042724 STRN3 (ENSGGOG00000006096) #21 ENSGGOG00000003198 #22 HECTD1 (ENSGGOG00000026552) #23 HEATR5A (ENSGGOG00000000655) #24 DTD2 (ENSGGOG00000043676) #25 GPR33 (ENSGGOG00000026905) #26 NUBPL (ENSGGOG00000009764) #27 ARHGAP5 (ENSGGOG00000002593) #28 ENSGGOG00000042101 AKAP6 (ENSGGOG00000025608) ENSGGOG00000041161 ENSGGOG00000022941 ENSGGOG00000037716 EGLN3 (ENSGGOG00000014900) EAPP (ENSGGOG00000007784) SNX6 (ENSGGOG00000007659) CFL2 (ENSGGOG00000038032) Homo/Pan group ANCESTRAL SPECIES 11 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb ENSGT00950000183000.c.b Human MODERN SPECIES 5 CBLN3 (ENSG00000139899) KHNYN (ENSG00000100441) SDR39U1 (ENSG00000100445) CMA1 (ENSG00000092009) CTSG (ENSG00000100448) GZMH (ENSG00000100450) GZMB (ENSG00000100453) STXBP6 (ENSG00000168952) NOVA1 (ENSG00000139910) FOXG1 (ENSG00000176165) #16 PRKD1 (ENSG00000184304) #17 G2E3 (ENSG00000092140) #18 SCFD1 (ENSG00000092108) #19 COCH (ENSG00000100473) #20 STRN3 (ENSG00000196792) #21 AP4S1 (ENSG00000100478) #22 HECTD1 (ENSG00000092148) #23 HEATR5A (ENSG00000129493) #24 ENSG00000203546 DTD2 (ENSG00000129480) #25 GPR33 (ENSG00000214943) #26 NUBPL (ENSG00000151413) #27 ARHGAP5 (ENSG00000100852) #28 AKAP6 (ENSG00000151320) NPAS3 (ENSG00000151322) EGLN3 (ENSG00000129521) SPTSSA (ENSG00000165389) EAPP (ENSG00000129518) SNX6 (ENSG00000129515) CFL2 (ENSG00000165410) BAZ1A (ENSG00000198604) Pan ANCESTRAL SPECIES 8 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb ENSGT00950000183000.c.b Bonobo MODERN SPECIES 5 CTSG (ENSPPAG00000012631) GZMH (ENSPPAG00000036072) GZMB (ENSPPAG00000041223) ENSPPAG00000029794 ENSPPAG00000033264 NOVA1 (ENSPPAG00000038980) ENSPPAG00000016025 #16 ENSPPAG00000040567 PRKD1 (ENSPPAG00000037023) #17 G2E3 (ENSPPAG00000028644) #18 SCFD1 (ENSPPAG00000042546) #19 ENSPPAG00000037740 ENSPPAG00000038553 COCH (ENSPPAG00000042223) #20 STRN3 (ENSPPAG00000028044) #21 ENSPPAG00000041450 #22 HECTD1 (ENSPPAG00000036559) #23 HEATR5A (ENSPPAG00000034508) #24 DTD2 (ENSPPAG00000029393) #25 GPR33 (ENSPPAG00000016765) #26 ENSPPAG00000033459 ENSPPAG00000034553 #27 ARHGAP5 (ENSPPAG00000037127) #28 AKAP6 (ENSPPAG00000036668) NPAS3 (ENSPPAG00000028096) ENSPPAG00000004989 EGLN3 (ENSPPAG00000018135) EAPP (ENSPPAG00000030095) SNX6 (ENSPPAG00000037141) CFL2 (ENSPPAG00000007558) ENSPPAG00000008100 Chimpanzee MODERN SPECIES 5 CMA1 (ENSPTRG00000006223) CTSG (ENSPTRG00000006224) GZMB (ENSPTRG00000006226) STXBP6 (ENSPTRG00000006227) ENSPTRG00000052577 NOVA1 (ENSPTRG00000006229) FOXG1 (ENSPTRG00000030783) #16 ENSPTRG00000006231 PRKD1 (ENSPTRG00000006232) #17 G2E3 (ENSPTRG00000006234) #18 SCFD1 (ENSPTRG00000006235) #19 ENSPTRG00000052239 ENSPTRG00000047778 COCH (ENSPTRG00000006237) #20 STRN3 (ENSPTRG00000006238) #21 AP4S1 (ENSPTRG00000006239) #22 HECTD1 (ENSPTRG00000006240) #23 HEATR5A (ENSPTRG00000006241) #24 DTD2 (ENSPTRG00000006244) #25 GPR33 (ENSPTRG00000032557) #26 NUBPL (ENSPTRG00000006245) #27 ARHGAP5 (ENSPTRG00000006246) #28 AKAP6 (ENSPTRG00000006247) NPAS3 (ENSPTRG00000006249) ENSPTRG00000043856 EGLN3 (ENSPTRG00000006250) SPTSSA (ENSPTRG00000006251) EAPP (ENSPTRG00000006252) SNX6 (ENSPTRG00000006253) CFL2 (ENSPTRG00000006254) ENSPTRG00000051817 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT01030000234513.A.a.b ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a Macaca ANCESTRAL SPECIES 9 ENSGT00390000011103.B.j ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a ENSGT00940000157785 Macaca_a ANCESTRAL SPECIES 9 ENSGT00390000011103.B.j ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a.a.b.a ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000160189 Crab-eating macaque MODERN SPECIES 14 CGA (ENSMFAG00000037707) ZNF292 (ENSMFAG00000045756) SMIM8 (ENSMFAG00000000775) ENSMFAG00000053614 C6orf163 (ENSMFAG00000045620) CFAP206 (ENSMFAG00000035889) ENSMFAG00000056350 SLC35A1 (ENSMFAG00000001045) RARS2 (ENSMFAG00000039420) ENSMFAG00000060786 ORC3 (ENSMFAG00000041907) AKIRIN2 (ENSMFAG00000023644) SPACA1 (ENSMFAG00000046308) CNR1 (ENSMFAG00000040164) RNGTT (ENSMFAG00000030988) ENSMFAG00000031569 #22 PNRC1 (ENSMFAG00000046306) ENSMFAG00000054442 ENSMFAG00000059889 SRSF12 (ENSMFAG00000048779) GABRR2 (ENSMFAG00000043423) UBE2J1 (ENSMFAG00000046333) RRAGD (ENSMFAG00000038149) ANKRD6 (ENSMFAG00000034278) LYRM2 (ENSMFAG00000055976) MDN1 (ENSMFAG00000041968) CASP8AP2 (ENSMFAG00000036833) GJA10 (ENSMFAG00000035012) ENSMFAG00000060642 BACH2 (ENSMFAG00000040061) MAP3K7 (ENSMFAG00000035469) Pig-tailed macaque MODERN SPECIES 79 ENSMNEG00000037112 HTR1E (ENSMNEG00000004973) CGA (ENSMNEG00000045132) ZNF292 (ENSMNEG00000043433) SMIM8 (ENSMNEG00000042949) C6orf163 (ENSMNEG00000045491) CFAP206 (ENSMNEG00000029408) SLC35A1 (ENSMNEG00000038937) RARS2 (ENSMNEG00000043383) ORC3 (ENSMNEG00000030771) AKIRIN2 (ENSMNEG00000040114) ENSMNEG00000045243 SPACA1 (ENSMNEG00000040936) ENSMNEG00000023905 RNGTT (ENSMNEG00000040764) ENSMNEG00000035079 #22 ENSMNEG00000000951 ENSMNEG00000002598 SRSF12 (ENSMNEG00000030957) PM20D2 (ENSMNEG00000037852) GABRR1 (ENSMNEG00000016603) GABRR2 (ENSMNEG00000030830) UBE2J1 (ENSMNEG00000028213) RRAGD (ENSMNEG00000033828) ANKRD6 (ENSMNEG00000043528) ENSMNEG00000035722 MDN1 (ENSMNEG00000042497) CASP8AP2 (ENSMNEG00000041673) GJA10 (ENSMNEG00000011947) BACH2 (ENSMNEG00000038521) MAP3K7 (ENSMNEG00000039436) Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00390000008099.w.a.a ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036.fb ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D ENSGT00940000158228.a Cercopithecinae_d ANCESTRAL SPECIES 35 ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036.fb ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D ENSGT00940000158228.a Sooty mangabey MODERN SPECIES 139 HTR1E (ENSCATG00000020218) CGA (ENSCATG00000041749) ENSCATG00000041508 ZNF292 (ENSCATG00000034148) SMIM8 (ENSCATG00000033189) C6orf163 (ENSCATG00000032899) CFAP206 (ENSCATG00000040165) SLC35A1 (ENSCATG00000034961) RARS2 (ENSCATG00000023833) ORC3 (ENSCATG00000043319) AKIRIN2 (ENSCATG00000040852) SPACA1 (ENSCATG00000038646) RNGTT (ENSCATG00000045048) ENSCATG00000044563 #22 PNRC1 (ENSCATG00000042984) SRSF12 (ENSCATG00000030620) PM20D2 (ENSCATG00000028215) GABRR1 (ENSCATG00000044484) ENSCATG00000043258 GABRR2 (ENSCATG00000041117) UBE2J1 (ENSCATG00000039458) RRAGD (ENSCATG00000017528) ANKRD6 (ENSCATG00000034920) LYRM2 (ENSCATG00000038992) MDN1 (ENSCATG00000045011) CASP8AP2 (ENSCATG00000014543) GJA10 (ENSCATG00000005843) BACH2 (ENSCATG00000037186) ENSCATG00000033625 Vervet Monkey MODERN SPECIES 4 CGA (ENSCSAG00000017361) ZNF292 (ENSCSAG00000017359) GJB7 (ENSCSAG00000000195) SMIM8 (ENSCSAG00000017356) C6orf163 (ENSCSAG00000017354) ENSCSAG00000017350 CFAP206 (ENSCSAG00000017348) SLC35A1 (ENSCSAG00000017346) RARS2 (ENSCSAG00000017345) ORC3 (ENSCSAG00000017343) AKIRIN2 (ENSCSAG00000017340) SPACA1 (ENSCSAG00000017335) CNR1 (ENSCSAG00000000194) RNGTT (ENSCSAG00000017333) ENSCSAG00000017330 ENSCSAG00000000193 #22 PNRC1 (ENSCSAG00000017327) SRSF12 (ENSCSAG00000017325) PM20D2 (ENSCSAG00000017322) GABRR1 (ENSCSAG00000017318) GABRR2 (ENSCSAG00000017310) UBE2J1 (ENSCSAG00000017306) RRAGD (ENSCSAG00000017302) ANKRD6 (ENSCSAG00000017299) LYRM2 (ENSCSAG00000017297) ENSCSAG00000017292 ENSCSAG00000017283 ENSCSAG00000017279 CASP8AP2 (ENSCSAG00000017276) GJA10 (ENSCSAG00000000192) BACH2 (ENSCSAG00000017273) Cercopithecinae ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Macaca ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Pig-tailed macaque MODERN SPECIES 548 CMA1 (ENSMNEG00000037233) CTSG (ENSMNEG00000033836) GZMB (ENSMNEG00000030038) STXBP6 (ENSMNEG00000035846) ENSMNEG00000028242 NOVA1 (ENSMNEG00000040302) ENSMNEG00000031451 ENSMNEG00000003788 ENSMNEG00000043357 PRKD1 (ENSMNEG00000015251) #17 G2E3 (ENSMNEG00000033498) #18 SCFD1 (ENSMNEG00000035218) #19 ENSMNEG00000041776 COCH (ENSMNEG00000031522) #20 STRN3 (ENSMNEG00000032023) #21 ENSMNEG00000040344 #22 HECTD1 (ENSMNEG00000001350) #23 HEATR5A (ENSMNEG00000034513) #24 DTD2 (ENSMNEG00000045027) #25 NUBPL (ENSMNEG00000031679) #27 ENSMNEG00000027078 ARHGAP5 (ENSMNEG00000044390) #28 ENSMNEG00000011661 AKAP6 (ENSMNEG00000039858) NPAS3 (ENSMNEG00000034614) ENSMNEG00000019306 EGLN3 (ENSMNEG00000034405) SPTSSA (ENSMNEG00000041970) EAPP (ENSMNEG00000034819) SNX6 (ENSMNEG00000044189) CFL2 (ENSMNEG00000039241) Cercopithecinae ANCESTRAL SPECIES 2 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Macaca ANCESTRAL SPECIES 1 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01050000248456 ENSGT00940000155573 ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.b.b ENSGT00390000001332 ENSGT00940000154940.pb ENSGT00950000183000.c.b Rhesus MODERN SPECIES 17 GZMB (ENSMMUG00000014381) STXBP6 (ENSMMUG00000015442) ENSMMUG00000050036 ENSMMUG00000055618 NOVA1 (ENSMMUG00000004271) FOXG1 (ENSMMUG00000021444) #16 ENSMMUG00000038390 PRKD1 (ENSMMUG00000022550) #17 ENSMMUG00000062130 ENSMMUG00000062346 ENSMMUG00000064617 G2E3 (ENSMMUG00000019691) #18 SCFD1 (ENSMMUG00000019692) #19 COCH (ENSMMUG00000011514) #20 STRN3 (ENSMMUG00000011515) #21 AP4S1 (ENSMMUG00000003123) #22 HECTD1 (ENSMMUG00000003120) #23 HEATR5A (ENSMMUG00000011779) #24 DTD2 (ENSMMUG00000050472) #25 GPR33 (ENSMMUG00000015703) #26 NUBPL (ENSMMUG00000012726) #27 ENSMMUG00000054094 ENSMMUG00000056320 ARHGAP5 (ENSMMUG00000016346) #28 AKAP6 (ENSMMUG00000015128) ENSMMUG00000062990 NPAS3 (ENSMMUG00000014839) ENSMMUG00000054677 EGLN3 (ENSMMUG00000000040) ENSMMUG00000064654 ENSMMUG00000057166 Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000052065 ENSMFAG00000058625 ENSMFAG00000061901 NOVA1 (ENSMFAG00000035425) ENSMFAG00000031652 ENSMFAG00000060602 ENSMFAG00000048178 ENSMFAG00000061081 FOXG1 (ENSMFAG00000000544) #16 ENSMFAG00000033313 PRKD1 (ENSMFAG00000039957) #17 G2E3 (ENSMFAG00000033929) #18 SCFD1 (ENSMFAG00000039675) #19 COCH (ENSMFAG00000043586) #20 STRN3 (ENSMFAG00000030208) #21 ENSMFAG00000032637 #22 HECTD1 (ENSMFAG00000038044) #23 HEATR5A (ENSMFAG00000031414) #24 DTD2 (ENSMFAG00000044459) #25 GPR33 (ENSMFAG00000038012) #26 ENSMFAG00000062632 ENSMFAG00000054026 NUBPL (ENSMFAG00000038751) #27 ARHGAP5 (ENSMFAG00000000350) #28 AKAP6 (ENSMFAG00000040818) ENSMFAG00000000440 NPAS3 (ENSMFAG00000043431) ENSMFAG00000057891 EGLN3 (ENSMFAG00000036942) ENSMFAG00000058983 SPTSSA (ENSMFAG00000048755) Cercopithecinae_b DUPLICATION Cercopithecinae_b DUPLICATION Cercopithecinae_b ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.a #22 Olive baboon MODERN SPECIES 16 ENSPANG00000050985 HTR1E (ENSPANG00000005474) ENSPANG00000039493 ZNF292 (ENSPANG00000007401) ENSPANG00000020538 C6orf163 (ENSPANG00000006405) CFAP206 (ENSPANG00000024964) SLC35A1 (ENSPANG00000011579) RARS2 (ENSPANG00000000663) ORC3 (ENSPANG00000001079) AKIRIN2 (ENSPANG00000020357) ENSPANG00000039569 SPACA1 (ENSPANG00000023127) CNR1 (ENSPANG00000018644) RNGTT (ENSPANG00000010454) ENSPANG00000013953 #22 PM20D2 (ENSPANG00000020356) SRSF12 (ENSPANG00000016731) GABRR1 (ENSPANG00000020411) GABRR2 (ENSPANG00000010453) UBE2J1 (ENSPANG00000016471) RRAGD (ENSPANG00000021498) ANKRD6 (ENSPANG00000017857) LYRM2 (ENSPANG00000024769) MDN1 (ENSPANG00000033473) CASP8AP2 (ENSPANG00000016264) GJA10 (ENSPANG00000011128) BACH2 (ENSPANG00000006817) MAP3K7 (ENSPANG00000021959) ENSPANG00000045484 ENSPANG00000050211 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.a #22 Drill MODERN SPECIES 896 CFAP206 (ENSMLEG00000030746) SLC35A1 (ENSMLEG00000038798) RARS2 (ENSMLEG00000036913) ORC3 (ENSMLEG00000031406) AKIRIN2 (ENSMLEG00000042845) SPACA1 (ENSMLEG00000000535) RNGTT (ENSMLEG00000036501) ENSMLEG00000025014 #22 PNRC1 (ENSMLEG00000035351) SRSF12 (ENSMLEG00000042204) PM20D2 (ENSMLEG00000034819) GABRR1 (ENSMLEG00000037111) ENSMLEG00000036657 GABRR2 (ENSMLEG00000035249) UBE2J1 (ENSMLEG00000033818) RRAGD (ENSMLEG00000002405) ANKRD6 (ENSMLEG00000035340) LYRM2 (ENSMLEG00000033284) MDN1 (ENSMLEG00000042713) CASP8AP2 (ENSMLEG00000040162) ENSMLEG00000031189 GJA10 (ENSMLEG00000032578) BACH2 (ENSMLEG00000043165) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.b #22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.b #22 Drill MODERN SPECIES 1147 ENSMLEG00000033922 PRKD1 (ENSMLEG00000038538) #17 G2E3 (ENSMLEG00000000130) #18 ENSMLEG00000040005 SCFD1 (ENSMLEG00000040452) #19 COCH (ENSMLEG00000041242) #20 STRN3 (ENSMLEG00000002796) #21 ENSMLEG00000027407 #22 HECTD1 (ENSMLEG00000037269) #23 HEATR5A (ENSMLEG00000021879) #24 DTD2 (ENSMLEG00000000901) #25 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x.b #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940.pb Cercopithecinae_d ANCESTRAL SPECIES 101 ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x.b #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Sooty mangabey MODERN SPECIES 186 ENSCATG00000036166 ENSCATG00000016038 FOXG1 (ENSCATG00000017354) #16 ENSCATG00000039455 ENSCATG00000035671 PRKD1 (ENSCATG00000007883) #17 ENSCATG00000022351 G2E3 (ENSCATG00000030515) #18 ENSCATG00000013950 SCFD1 (ENSCATG00000036581) #19 COCH (ENSCATG00000007110) #20 ENSCATG00000029724 STRN3 (ENSCATG00000022375) #21 ENSCATG00000035780 #22 HECTD1 (ENSCATG00000032933) #23 HEATR5A (ENSCATG00000032282) #24 DTD2 (ENSCATG00000031883) #25 NUBPL (ENSCATG00000033880) #27 ENSCATG00000015897 ARHGAP5 (ENSCATG00000035037) #28 ENSCATG00000018768 AKAP6 (ENSCATG00000037210) NPAS3 (ENSCATG00000029945) ENSCATG00000043412 EGLN3 (ENSCATG00000040041) ENSCATG00000030363 SPTSSA (ENSCATG00000029208) EAPP (ENSCATG00000044341) Olive baboon MODERN SPECIES 17 GZMB (ENSPANG00000023854) ENSPANG00000023856 ENSPANG00000040110 ENSPANG00000039253 NOVA1 (ENSPANG00000004891) ENSPANG00000041818 FOXG1 (ENSPANG00000020365) #16 ENSPANG00000020459 ENSPANG00000047513 PRKD1 (ENSPANG00000009943) #17 G2E3 (ENSPANG00000015300) #18 SCFD1 (ENSPANG00000016614) #19 ENSPANG00000038938 COCH (ENSPANG00000011160) #20 STRN3 (ENSPANG00000020458) #21 ENSPANG00000017427 #22 HECTD1 (ENSPANG00000017149) #23 HEATR5A (ENSPANG00000000801) #24 DTD2 (ENSPANG00000021336) #25 GPR33 (ENSPANG00000021666) #26 NUBPL (ENSPANG00000021781) #27 ENSPANG00000047627 ARHGAP5 (ENSPANG00000024272) #28 ENSPANG00000038472 ENSPANG00000038010 AKAP6 (ENSPANG00000022397) NPAS3 (ENSPANG00000021333) EGLN3 (ENSPANG00000047484) ENSPANG00000039055 SPTSSA (ENSPANG00000044993) EAPP (ENSPANG00000018424) Rhinopithecus ANCESTRAL SPECIES 225 ENSGT00940000155573 ENSGT00390000011740.o.a.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00390000014814.a.b.a.b.a.b ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 554 RNGTT (ENSRBIG00000031371) ENSRBIG00000039603 #22 ENSRBIG00000033270 ENSRBIG00000015851 SRSF12 (ENSRBIG00000029756) PM20D2 (ENSRBIG00000028170) GABRR1 (ENSRBIG00000033754) ENSRBIG00000029173 GABRR2 (ENSRBIG00000033560) UBE2J1 (ENSRBIG00000040894) RRAGD (ENSRBIG00000035825) ENSRBIG00000031594 ANKRD6 (ENSRBIG00000040932) LYRM2 (ENSRBIG00000038797) MDN1 (ENSRBIG00000026947) CASP8AP2 (ENSRBIG00000017037) ENSRBIG00000037272 Black snub-nosed monkey MODERN SPECIES 1258 NOVA1 (ENSRBIG00000026331) ENSRBIG00000043316 FOXG1 (ENSRBIG00000023959) #16 ENSRBIG00000031563 ENSRBIG00000023096 PRKD1 (ENSRBIG00000023650) #17 ENSRBIG00000044315 ENSRBIG00000021976 G2E3 (ENSRBIG00000038648) #18 SCFD1 (ENSRBIG00000035795) #19 COCH (ENSRBIG00000024567) #20 STRN3 (ENSRBIG00000034106) #21 ENSRBIG00000031706 #22 HECTD1 (ENSRBIG00000014027) #23 HEATR5A (ENSRBIG00000035494) #24 DTD2 (ENSRBIG00000031412) #25 NUBPL (ENSRBIG00000033232) #27 ENSRBIG00000038307 ARHGAP5 (ENSRBIG00000016020) #28 AKAP6 (ENSRBIG00000038045) ENSRBIG00000032788 NPAS3 (ENSRBIG00000032686) ENSRBIG00000019858 EGLN3 (ENSRBIG00000039961) SPTSSA (ENSRBIG00000039846) EAPP (ENSRBIG00000044230) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3216 RNGTT (ENSRROG00000030932) ENSRROG00000025341 ENSRROG00000028750 #22 ENSRROG00000037633 ENSRROG00000012648 SRSF12 (ENSRROG00000035967) PM20D2 (ENSRROG00000029139) GABRR1 (ENSRROG00000031005) ENSRROG00000039270 GABRR2 (ENSRROG00000036077) UBE2J1 (ENSRROG00000044687) RRAGD (ENSRROG00000041534) ENSRROG00000027171 ENSRROG00000022559 ANKRD6 (ENSRROG00000043779) LYRM2 (ENSRROG00000005389) MDN1 (ENSRROG00000026180) CASP8AP2 (ENSRROG00000033739) Golden snub-nosed monkey MODERN SPECIES 1802 ENSRROG00000026815 #16 ENSRROG00000040454 ENSRROG00000042434 PRKD1 (ENSRROG00000031270) #17 ENSRROG00000016372 G2E3 (ENSRROG00000040994) #18 ENSRROG00000034261 SCFD1 (ENSRROG00000033120) #19 COCH (ENSRROG00000032576) #20 ENSRROG00000039999 STRN3 (ENSRROG00000044804) #21 ENSRROG00000019504 #22 HECTD1 (ENSRROG00000014728) #23 HEATR5A (ENSRROG00000035401) #24 DTD2 (ENSRROG00000033463) #25 NUBPL (ENSRROG00000045260) #27 ENSRROG00000040570 ENSRROG00000040701 ARHGAP5 (ENSRROG00000043273) #28 Platyrrhini ANCESTRAL SPECIES 4 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332.l ENSGT00940000154940.pb ENSGT00950000183000.c.b Mas night monkey MODERN SPECIES 819 KHNYN (ENSANAG00000023698) SDR39U1 (ENSANAG00000026864) CMA1 (ENSANAG00000028506) CTSG (ENSANAG00000025418) GZMH (ENSANAG00000022041) GZMB (ENSANAG00000032891) STXBP6 (ENSANAG00000025116) ENSANAG00000034584 NOVA1 (ENSANAG00000028004) ENSANAG00000028865 PRKD1 (ENSANAG00000032943) #17 G2E3 (ENSANAG00000024605) #18 SCFD1 (ENSANAG00000025849) #19 COCH (ENSANAG00000029746) #20 STRN3 (ENSANAG00000026168) #21 AP4S1 (ENSANAG00000026444) #22 HECTD1 (ENSANAG00000037367) #23 ENSANAG00000035920 #24 ENSANAG00000033419 DTD2 (ENSANAG00000036862) #25 NUBPL (ENSANAG00000036864) #27 ARHGAP5 (ENSANAG00000037055) #28 AKAP6 (ENSANAG00000034900) ENSANAG00000020942 NPAS3 (ENSANAG00000023028) ENSANAG00000020399 EGLN3 (ENSANAG00000037222) ENSANAG00000024247 ENSANAG00000021068 ENSANAG00000030653 SNX6 (ENSANAG00000019855) Cebidae ANCESTRAL SPECIES 3 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332.l ENSGT00940000154940.pb ENSGT00950000183000.c.b Cebidae_a ANCESTRAL SPECIES 4 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 ENSGT01020000230798 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332.k.a ENSGT00940000154940.pb ENSGT00950000183000.c.b ENSGT00940000158135 Capuchin MODERN SPECIES 104 NOVA1 (ENSCCAG00000026410) FOXG1 (ENSCCAG00000020029) #16 ENSCCAG00000027095 PRKD1 (ENSCCAG00000035438) #17 G2E3 (ENSCCAG00000035971) #18 SCFD1 (ENSCCAG00000032443) #19 COCH (ENSCCAG00000024866) #20 STRN3 (ENSCCAG00000011456) #21 AP4S1 (ENSCCAG00000021787) #22 HECTD1 (ENSCCAG00000012275) #23 HEATR5A (ENSCCAG00000031936) #24 CASP7 (ENSCCAG00000022261) PLEKHS1 (ENSCCAG00000035291) ENSCCAG00000028782 NHLRC2 (ENSCCAG00000025322) CCDC186 (ENSCCAG00000023942) TDRD1 (ENSCCAG00000027375) Bolivian squirrel monkey MODERN SPECIES 52 CTSG (ENSSBOG00000030717) ENSSBOG00000019753 GZMH (ENSSBOG00000026395) GZMB (ENSSBOG00000016642) STXBP6 (ENSSBOG00000022536) ENSSBOG00000033503 NOVA1 (ENSSBOG00000034029) ENSSBOG00000029497 ENSSBOG00000009503 #16 ENSSBOG00000034922 PRKD1 (ENSSBOG00000035413) #17 G2E3 (ENSSBOG00000028363) #18 SCFD1 (ENSSBOG00000031363) #19 COCH (ENSSBOG00000011793) #20 STRN3 (ENSSBOG00000023010) #21 AP4S1 (ENSSBOG00000026649) #22 HECTD1 (ENSSBOG00000026436) #23 ENSSBOG00000033123 HEATR5A (ENSSBOG00000032305) #24 DTD2 (ENSSBOG00000027444) #25 NUBPL (ENSSBOG00000033649) #27 ARHGAP5 (ENSSBOG00000025460) #28 AKAP6 (ENSSBOG00000021858) NPAS3 (ENSSBOG00000021474) EGLN3 (ENSSBOG00000032045) ENSSBOG00000035596 SPTSSA (ENSSBOG00000035589) ENSSBOG00000033003 SNX6 (ENSSBOG00000022890) CFL2 (ENSSBOG00000014011) BAZ1A (ENSSBOG00000028821) Marmoset MODERN SPECIES 1 CMA1 (ENSCJAG00000006344) CTSG (ENSCJAG00000006323) GZMH (ENSCJAG00000006314) GZMB (ENSCJAG00000006291) STXBP6 (ENSCJAG00000045104) ENSCJAG00000069808 NOVA1 (ENSCJAG00000039497) ENSCJAG00000022035 FOXG1 (ENSCJAG00000006213) #16 PRKD1 (ENSCJAG00000006180) #17 G2E3 (ENSCJAG00000006106) #18 SCFD1 (ENSCJAG00000005938) #19 COCH (ENSCJAG00000005886) #20 STRN3 (ENSCJAG00000005822) #21 ENSCJAG00000071091 AP4S1 (ENSCJAG00000005786) #22 HECTD1 (ENSCJAG00000005631) #23 ENSCJAG00000073672 HEATR5A (ENSCJAG00000005593) #24 ENSCJAG00000075200 DTD2 (ENSCJAG00000073851) #25 GPR33 (ENSCJAG00000035428) #26 NUBPL (ENSCJAG00000005582) #27 ARHGAP5 (ENSCJAG00000005538) #28 AKAP6 (ENSCJAG00000005474) NPAS3 (ENSCJAG00000047425) EGLN3 (ENSCJAG00000005424) SPTSSA (ENSCJAG00000086959) ENSCJAG00000032302 EAPP (ENSCJAG00000042239) SNX6 (ENSCJAG00000044761) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Tree shrew MODERN SPECIES 5970 ENSTBEG00000015333 #22 Glires ANCESTRAL SPECIES 12 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Lagomorpha ANCESTRAL SPECIES 14 ENSGT00940000160206 ENSGT00940000160923 ENSGT00940000161519 ENSGT00940000162110 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00940000167277 ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 Rabbit MODERN SPECIES 8 ENSOCUG00000028992 STXBP6 (ENSOCUG00000005144) ENSOCUG00000033166 ENSOCUG00000026942 NOVA1 (ENSOCUG00000017622) ENSOCUG00000022058 ENSOCUG00000007554 ENSOCUG00000022201 ENSOCUG00000024246 #16 ENSOCUG00000037372 PRKD1 (ENSOCUG00000022585) #17 G2E3 (ENSOCUG00000007824) #18 SCFD1 (ENSOCUG00000007835) #19 COCH (ENSOCUG00000012042) #20 STRN3 (ENSOCUG00000011418) #21 AP4S1 (ENSOCUG00000011430) #22 HECTD1 (ENSOCUG00000003816) #23 ENSOCUG00000002021 HEATR5A (ENSOCUG00000007228) #24 ENSOCUG00000027034 DTD2 (ENSOCUG00000007778) #25 GPR33 (ENSOCUG00000022411) #26 NUBPL (ENSOCUG00000017713) #27 ARHGAP5 (ENSOCUG00000010548) #28 ENSOCUG00000025739 AKAP6 (ENSOCUG00000014205) NPAS3 (ENSOCUG00000010632) ENSOCUG00000008560 ENSOCUG00000024362 EAPP (ENSOCUG00000003226) SNX6 (ENSOCUG00000029421) Pika MODERN SPECIES 5266 AP4S1 (ENSOPRG00000016762) #22 HECTD1 (ENSOPRG00000002296) #23 Rodentia ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Hystricomorpha ANCESTRAL SPECIES 15 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Naked mole-rat female MODERN SPECIES 11 CIDEB (ENSHGLG00000002818) NOP9 (ENSHGLG00000002852) DHRS1 (ENSHGLG00000037207) RABGGTA (ENSHGLG00000002942) ENSHGLG00000003157 ENSHGLG00000003920 ENSHGLG00000043958 ENSHGLG00000002296 ENSHGLG00000043059 ENSHGLG00000045310 ENSHGLG00000036541 ENSHGLG00000004538 COCH (ENSHGLG00000002211) #20 ENSHGLG00000002072 #21 ENSHGLG00000031903 ENSHGLG00000006911 #22 HECTD1 (ENSHGLG00000004613) #23 ENSHGLG00000038178 HEATR5A (ENSHGLG00000002799) #24 ENSHGLG00000038655 DTD2 (ENSHGLG00000046094) #25 GPR33 (ENSHGLG00000019958) #26 ENSHGLG00000001878 NUBPL (ENSHGLG00000043820) #27 ENSHGLG00000003444 ENSHGLG00000043700 ENSHGLG00000003356 #28 ENSHGLG00000050973 ENSHGLG00000048569 ENSHGLG00000036198 ENSHGLG00000050257 Hystricomorpha_a ANCESTRAL SPECIES 18 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Guinea pig MODERN SPECIES 77 ENSCPOG00000031139 ENSCPOG00000024606 ENSCPOG00000024349 ENSCPOG00000022248 STXBP6 (ENSCPOG00000033780) NOVA1 (ENSCPOG00000030872) PRKD1 (ENSCPOG00000004855) #17 G2E3 (ENSCPOG00000002781) #18 ENSCPOG00000013059 SCFD1 (ENSCPOG00000007229) #19 COCH (ENSCPOG00000015577) #20 STRN3 (ENSCPOG00000015579) #21 AP4S1 (ENSCPOG00000005118) #22 HECTD1 (ENSCPOG00000013566) #23 ENSCPOG00000036916 HEATR5A (ENSCPOG00000015747) #24 DTD2 (ENSCPOG00000036705) #25 GPR33 (ENSCPOG00000038573) #26 NUBPL (ENSCPOG00000010163) #27 ENSCPOG00000030336 ARHGAP5 (ENSCPOG00000007798) #28 Hystricomorpha_b ANCESTRAL SPECIES 18 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 116 ENSCLAG00000011419 ENSCLAG00000010999 ENSCLAG00000010184 ENSCLAG00000010208 GZMH (ENSCLAG00000010860) ENSCLAG00000010055 STXBP6 (ENSCLAG00000009408) NOVA1 (ENSCLAG00000008948) ENSCLAG00000015104 FOXG1 (ENSCLAG00000011906) #16 PRKD1 (ENSCLAG00000011245) #17 G2E3 (ENSCLAG00000008721) #18 SCFD1 (ENSCLAG00000012279) #19 COCH (ENSCLAG00000011067) #20 ENSCLAG00000011538 #21 ENSCLAG00000009036 #22 HECTD1 (ENSCLAG00000011096) #23 HEATR5A (ENSCLAG00000009555) #24 DTD2 (ENSCLAG00000014737) #25 GPR33 (ENSCLAG00000013344) #26 NUBPL (ENSCLAG00000011929) #27 ARHGAP5 (ENSCLAG00000015975) #28 AKAP6 (ENSCLAG00000013553) NPAS3 (ENSCLAG00000013939) ENSCLAG00000011029 EGLN3 (ENSCLAG00000010720) ENSCLAG00000012005 EAPP (ENSCLAG00000013007) SNX6 (ENSCLAG00000012353) ENSCLAG00000012876 BAZ1A (ENSCLAG00000015173) Long-tailed chinchilla MODERN SPECIES 132 ZNF365 (ENSCLAG00000010746) ADO (ENSCLAG00000010337) EGR2 (ENSCLAG00000009233) ENSCLAG00000010415 NRBF2 (ENSCLAG00000011072) JMJD1C (ENSCLAG00000012242) REEP3 (ENSCLAG00000012622) ENSCLAG00000012770 ENSCLAG00000009474 CTNNA3 (ENSCLAG00000010308) LRRTM3 (ENSCLAG00000011661) DNAJC12 (ENSCLAG00000012847) SIRT1 (ENSCLAG00000015502) HERC4 (ENSCLAG00000016138) MYPN (ENSCLAG00000011004) ENSCLAG00000014026 #22 PBLD (ENSCLAG00000010284) HNRNPH3 (ENSCLAG00000010680) RUFY2 (ENSCLAG00000012405) DNA2 (ENSCLAG00000012086) SLC25A16 (ENSCLAG00000015512) CCAR1 (ENSCLAG00000011807) THBS4 (ENSCLAG00000009452) MTX3 (ENSCLAG00000011076) CMYA5 (ENSCLAG00000009334) TENT2 (ENSCLAG00000010023) HOMER1 (ENSCLAG00000010571) JMY (ENSCLAG00000009333) BHMT (ENSCLAG00000010253) BHMT2 (ENSCLAG00000013633) DMGDH (ENSCLAG00000014854) Degu DUPLICATION Degu MODERN SPECIES 331 ENSODEG00000002423 #22 ENSODEG00000002362 ENSODEG00000002343 ENSODEG00000002260 ENSODEG00000002224 ENSODEG00000002218 Degu MODERN SPECIES 127 ENSODEG00000005143 ENSODEG00000005132 FOXG1 (ENSODEG00000005094) #16 ENSODEG00000019116 ENSODEG00000005027 PRKD1 (ENSODEG00000004844) #17 ENSODEG00000004710 G2E3 (ENSODEG00000004806) #18 SCFD1 (ENSODEG00000004638) #19 COCH (ENSODEG00000004531) #20 STRN3 (ENSODEG00000004497) #21 ENSODEG00000004725 #22 HECTD1 (ENSODEG00000004383) #23 ENSODEG00000019035 HEATR5A (ENSODEG00000003991) #24 ENSODEG00000003834 #25 ENSODEG00000003785 NUBPL (ENSODEG00000008332) #27 ENSODEG00000008269 ENSODEG00000008253 ARHGAP5 (ENSODEG00000008123) #28 AKAP6 (ENSODEG00000008112) ENSODEG00000008077 NPAS3 (ENSODEG00000007900) STRC (ENSODEG00000007474) ENSODEG00000007361 ENSODEG00000005621 Sciuridae ANCESTRAL SPECIES 8 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i ENSGT01030000234551.k.d.b.a.a.a.b.b.b.j ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Marmotini ANCESTRAL SPECIES 15 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i.a ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 Marmotini_b ANCESTRAL SPECIES 108 ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.j.a ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Arctic ground squirrel MODERN SPECIES 18 ENSUPAG00010014330 ENSUPAG00010014315 ENSUPAG00010014307 ENSUPAG00010012638 ENSUPAG00010012609 STXBP6 (ENSUPAG00010012595) NOVA1 (ENSUPAG00010012581) ENSUPAG00010012575 FOXG1 (ENSUPAG00010012563) #16 PRKD1 (ENSUPAG00010012522) #17 G2E3 (ENSUPAG00010012503) #18 SCFD1 (ENSUPAG00010012422) #19 COCH (ENSUPAG00010012392) #20 STRN3 (ENSUPAG00010012325) #21 AP4S1 (ENSUPAG00010012317) #22 HECTD1 (ENSUPAG00010012181) #23 HEATR5A (ENSUPAG00010002104) #24 ENSUPAG00010002029 #25 GPR33 (ENSUPAG00010002026) #26 NUBPL (ENSUPAG00010002012) #27 ARHGAP5 (ENSUPAG00010001993) #28 AKAP6 (ENSUPAG00010001952) ENSUPAG00010001945 NPAS3 (ENSUPAG00010001878) EGLN3 (ENSUPAG00010001862) SPTSSA (ENSUPAG00010001850) ENSUPAG00010001845 EAPP (ENSUPAG00010001833) SNX6 (ENSUPAG00010001786) ENSUPAG00010001776 Squirrel DUPLICATION Squirrel MODERN SPECIES 84 ENSSTOG00000011910 ENSSTOG00000022442 AKR1E2 (ENSSTOG00000014534) ENSSTOG00000031995 KLF6 (ENSSTOG00000007751) PITRM1 (ENSSTOG00000006348) PFKP (ENSSTOG00000006311) ADARB2 (ENSSTOG00000014329) WDR37 (ENSSTOG00000014301) ENSSTOG00000023260 IDI2 (ENSSTOG00000010058) ENSSTOG00000010042 LARP4B (ENSSTOG00000000587) DIP2C (ENSSTOG00000012335) ZMYND11 (ENSSTOG00000010061) ENSSTOG00000034561 #22 CHRM3 (ENSSTOG00000021752) RYR2 (ENSSTOG00000014690) MTR (ENSSTOG00000004093) ACTN2 (ENSSTOG00000007354) HEATR1 (ENSSTOG00000007293) LGALS8 (ENSSTOG00000007266) EDARADD (ENSSTOG00000022830) ERO1B (ENSSTOG00000013810) GPR137B (ENSSTOG00000013802) NID1 (ENSSTOG00000015736) LYST (ENSSTOG00000015713) GNG4 (ENSSTOG00000015712) ENSSTOG00000030497 ENSSTOG00000020260 B3GALNT2 (ENSSTOG00000015705) Squirrel DUPLICATION Squirrel MODERN SPECIES 94 ENSSTOG00000023363 ENSSTOG00000029160 ENSSTOG00000027256 ENSSTOG00000023097 STXBP6 (ENSSTOG00000013479) NOVA1 (ENSSTOG00000020788) ENSSTOG00000027642 FOXG1 (ENSSTOG00000024079) #16 PRKD1 (ENSSTOG00000003873) #17 G2E3 (ENSSTOG00000008924) #18 SCFD1 (ENSSTOG00000008939) #19 COCH (ENSSTOG00000000556) #20 STRN3 (ENSSTOG00000010749) #21 ENSSTOG00000010759 #22 HECTD1 (ENSSTOG00000023965) #23 HEATR5A (ENSSTOG00000004620) #24 ENSSTOG00000025562 #25 GPR33 (ENSSTOG00000027164) #26 NUBPL (ENSSTOG00000004688) #27 ARHGAP5 (ENSSTOG00000020291) #28 AKAP6 (ENSSTOG00000024157) NPAS3 (ENSSTOG00000014736) EGLN3 (ENSSTOG00000027368) SPTSSA (ENSSTOG00000025158) ENSSTOG00000005273 SNX6 (ENSSTOG00000030590) ENSSTOG00000001675 BAZ1A (ENSSTOG00000012204) ENSSTOG00000027145 Squirrel MODERN SPECIES 153 PCDH9 (ENSSTOG00000025475) ENSSTOG00000032665 ENSSTOG00000019374 MAGEB18 (ENSSTOG00000010136) ENSSTOG00000026907 ENSSTOG00000033066 ENSSTOG00000031082 ENSSTOG00000026622 ENSSTOG00000026056 #22 IL1RAPL1 (ENSSTOG00000016269) ENSSTOG00000021156 NR0B1 (ENSSTOG00000025906) TASL (ENSSTOG00000027484) ENSSTOG00000008732 TAB3 (ENSSTOG00000027885) ENSSTOG00000020610 ENSSTOG00000028562 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 1 ENSMMMG00000011431 ENSMMMG00000011415 ENSMMMG00000009778 ENSMMMG00000009755 ENSMMMG00000009734 STXBP6 (ENSMMMG00000009706) NOVA1 (ENSMMMG00000009673) ENSMMMG00000009611 #16 PRKD1 (ENSMMMG00000009545) #17 ENSMMMG00000009512 ENSMMMG00000009483 #18 ENSMMMG00000009462 #18 SCFD1 (ENSMMMG00000009409) #19 COCH (ENSMMMG00000009368) #20 STRN3 (ENSMMMG00000007068) #21 AP4S1 (ENSMMMG00000007043) #22 HECTD1 (ENSMMMG00000006978) #23 HEATR5A (ENSMMMG00000006921) #24 DTD2 (ENSMMMG00000006910) #25 GPR33 (ENSMMMG00000006908) #26 NUBPL (ENSMMMG00000006890) #27 ENSMMMG00000006876 ARHGAP5 (ENSMMMG00000006856) #28 ENSMMMG00000006834 ENSMMMG00000006799 EGLN3 (ENSMMMG00000006788) SPTSSA (ENSMMMG00000006776) ENSMMMG00000006766 EAPP (ENSMMMG00000006761) ENSMMMG00000006742 ENSMMMG00000006738 Alpin marmot MODERN SPECIES TRMT6 (ENSMMMG00000000614) CHGB (ENSMMMG00000000597) SHLD1 (ENSMMMG00000000588) GPCPD1 (ENSMMMG00000000455) PROKR2 (ENSMMMG00000000400) CDS2 (ENSMMMG00000000346) ENSMMMG00000000309 TMEM230 (ENSMMMG00000000268) ENSMMMG00000000257 SLC23A2 (ENSMMMG00000000215) RASSF2 (ENSMMMG00000000162) PRND (ENSMMMG00000000142) PRNP (ENSMMMG00000000138) ENSMMMG00000000123 SMOX (ENSMMMG00000000044) ENSMMMG00000023958 #22 PANK2 (ENSMMMG00000023957) MAVS (ENSMMMG00000023955) AP5S1 (ENSMMMG00000023953) CDC25B (ENSMMMG00000023949) CENPB (ENSMMMG00000023947) SPEF1 (ENSMMMG00000023946) ADISSP (ENSMMMG00000023945) HSPA12B (ENSMMMG00000023943) SIGLEC1 (ENSMMMG00000023929) ADAM33 (ENSMMMG00000023924) GFRA4 (ENSMMMG00000023923) ATRN (ENSMMMG00000023922) ENSMMMG00000023921 DNAAF9 (ENSMMMG00000023920) SLC4A11 (ENSMMMG00000023919) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005004402 GZMB (ENSSVLG00005004217) ENSSVLG00005004187 ENSSVLG00005004176 STXBP6 (ENSSVLG00005004162) ENSSVLG00005004148 ENSSVLG00005004139 NOVA1 (ENSSVLG00005004100) FOXG1 (ENSSVLG00005004066) #16 PRKD1 (ENSSVLG00005003998) #17 ENSSVLG00005003953 #18 SCFD1 (ENSSVLG00005003909) #19 ENSSVLG00005003853 #20 ENSSVLG00005003807 #20 STRN3 (ENSSVLG00005003765) #21 AP4S1 (ENSSVLG00005003726) #22 HECTD1 (ENSSVLG00005003644) #23 HEATR5A (ENSSVLG00005003550) #24 DTD2 (ENSSVLG00005003527) #25 GPR33 (ENSSVLG00005003516) #26 NUBPL (ENSSVLG00005003491) #27 ARHGAP5 (ENSSVLG00005003448) #28 AKAP6 (ENSSVLG00005003395) NPAS3 (ENSSVLG00005003199) EGLN3 (ENSSVLG00005003108) ENSSVLG00005003092 ENSSVLG00005003086 ENSSVLG00005003068 ENSSVLG00005003053 ENSSVLG00005003042 ENSSVLG00005003024 Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005000672 ENSSVLG00005000638 ENSSVLG00005000613 CCDC93 (ENSSVLG00005000586) INSIG2 (ENSSVLG00005000562) EN1 (ENSSVLG00005000531) MARCO (ENSSVLG00005000500) C1QL2 (ENSSVLG00005000478) STEAP3 (ENSSVLG00005000464) C2orf76 (ENSSVLG00005000450) DBI (ENSSVLG00005000415) TMEM37 (ENSSVLG00005000377) SCTR (ENSSVLG00005000343) CFAP221 (ENSSVLG00005000301) TMEM177 (ENSSVLG00005000277) ENSSVLG00005000270 #22 PTPN4 (ENSSVLG00005000228) EPB41L5 (ENSSVLG00005024139) TMEM185B (ENSSVLG00005024068) RALB (ENSSVLG00005024049) INHBB (ENSSVLG00005024036) ENSSVLG00005024019 ENSSVLG00005023991 GLI2 (ENSSVLG00005023981) TFCP2L1 (ENSSVLG00005023914) CLASP1 (ENSSVLG00005023791) NIFK (ENSSVLG00005023724) TSN (ENSSVLG00005023674) ENSSVLG00005023632 ENSSVLG00005023597 ENSSVLG00005023566 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 487 ENSDORG00000029359 Prkd1 (ENSDORG00000000354) #17 G2e3 (ENSDORG00000010913) #18 Scfd1 (ENSDORG00000013408) #19 Coch (ENSDORG00000006859) #20 Strn3 (ENSDORG00000006860) #21 ENSDORG00000009468 #22 Hectd1 (ENSDORG00000005774) #23 Heatr5a (ENSDORG00000011883) #24 Dtd2 (ENSDORG00000009945) #25 Nubpl (ENSDORG00000013986) #27 Arhgap5 (ENSDORG00000005120) #28 Akap6 (ENSDORG00000011551) Npas3 (ENSDORG00000000860) Kangaroo rat MODERN SPECIES 456 ENSDORG00000029969 #22 ENSDORG00000008588 ENSDORG00000001970 Naa35 (ENSDORG00000001956) Agtpbp1 (ENSDORG00000011166) ENSDORG00000024497 Ntrk2 (ENSDORG00000007365) ENSDORG00000024890 Slc28a3 (ENSDORG00000008007) Rmi1 (ENSDORG00000028852) ENSDORG00000016024 2210016F16Rik (ENSDORG00000016023) Kif27 (ENSDORG00000011169) Gkap1 (ENSDORG00000026066) Ubqln1 (ENSDORG00000015266) Idnk (ENSDORG00000008263) Myomorpha ANCESTRAL SPECIES 7 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Lesser Egyptian jerboa MODERN SPECIES 86 Sdr39u1 (ENSJJAG00000019692) ENSJJAG00000004128 ##22 Cma1 (ENSJJAG00000014442) ENSJJAG00000016083 Ctsg (ENSJJAG00000009878) ENSJJAG00000012054 ENSJJAG00000012531 ENSJJAG00000015223 ENSJJAG00000001002 Nova1 (ENSJJAG00000012915) ENSJJAG00000001174 ENSJJAG00000001269 #16 G2e3 (ENSJJAG00000014439) #18 Coch (ENSJJAG00000019025) #20 Strn3 (ENSJJAG00000019703) #21 Ap4s1 (ENSJJAG00000022804) #22 Hectd1 (ENSJJAG00000001344) #23 Heatr5a (ENSJJAG00000019420) #24 ENSJJAG00000015737 #25 ENSJJAG00000019398 Arhgap5 (ENSJJAG00000022832) #28 Egln3 (ENSJJAG00000013045) ENSJJAG00000003660 Sptssa (ENSJJAG00000014413) ENSJJAG00000015801 Muroidea ANCESTRAL SPECIES 54 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Upper Galilee mountains blind mole rat MODERN SPECIES 1046 G2e3 (ENSNGAG00000005306) #18 Scfd1 (ENSNGAG00000016247) #19 Coch (ENSNGAG00000000675) #20 Strn3 (ENSNGAG00000009581) #21 Ap4s1 (ENSNGAG00000016226) #22 Hectd1 (ENSNGAG00000020429) #23 Heatr5a (ENSNGAG00000019811) #24 ENSNGAG00000011221 Muroidea_A ANCESTRAL SPECIES 15 ENSGT00390000010852 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Murinae ANCESTRAL SPECIES 8 ENSGT00390000010852 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Mus ANCESTRAL SPECIES 10 ENSGT00390000010852 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Mouse MODERN SPECIES 3 Dock4 (ENSMUSG00000035954) Immp2l (ENSMUSG00000056899) Lrrn3 (ENSMUSG00000036295) Dnajb9 (ENSMUSG00000014905) Pnpla8 (ENSMUSG00000036257) Nrcam (ENSMUSG00000020598) Stxbp6 (ENSMUSG00000046314) Nova1 (ENSMUSG00000021047) Foxg1 (ENSMUSG00000020950) #16 Gm43517 (ENSMUSG00000089922) Prkd1 (ENSMUSG00000002688) #17 G2e3 (ENSMUSG00000035293) #18 Scfd1 (ENSMUSG00000020952) #19 Coch (ENSMUSG00000020953) #20 Strn3 (ENSMUSG00000020954) #21 Ap4s1 (ENSMUSG00000020955) #22 Hectd1 (ENSMUSG00000035247) #23 Heatr5a (ENSMUSG00000035181) #24 Dtd2 (ENSMUSG00000020956) #25 Gpr33 (ENSMUSG00000035148) #26 Nubpl (ENSMUSG00000035142) #27 Arhgap5 (ENSMUSG00000035133) #28 Akap6 (ENSMUSG00000061603) Npas3 (ENSMUSG00000021010) Egln3 (ENSMUSG00000035105) Sptssa (ENSMUSG00000044408) Eapp (ENSMUSG00000054302) Snx6 (ENSMUSG00000005656) Cfl2 (ENSMUSG00000062929) Baz1a (ENSMUSG00000035021) 2700097O09Rik (ENSMUSG00000062198) Mus_C ANCESTRAL SPECIES 11 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Steppe mouse MODERN SPECIES 3314 ENSMSIG00000002590 ENSMSIG00000002603 ENSMSIG00000002627 ENSMSIG00000002727 G2e3 (ENSMSIG00000002770) #18 Scfd1 (ENSMSIG00000003039) #19 Coch (ENSMSIG00000003151) #20 Strn3 (ENSMSIG00000003232) #21 Ap4s1 (ENSMSIG00000003653) #22 Hectd1 (ENSMSIG00000003683) #23 ENSMSIG00000003791 Heatr5a (ENSMSIG00000003804) #24 Dtd2 (ENSMSIG00000003964) #25 Gpr33 (ENSMSIG00000003989) #26 Nubpl (ENSMSIG00000004004) #27 Arhgap5 (ENSMSIG00000004050) #28 Akap6 (ENSMSIG00000004164) Npas3 (ENSMSIG00000004473) ENSMSIG00000004706 ENSMSIG00000004720 Egln3 (ENSMSIG00000004731) ENSMSIG00000004766 spretus MODERN SPECIES 3 Nrcam (MGP_SPRETEiJ_G0018568) Stxbp6 (MGP_SPRETEiJ_G0018569) Nova1 (MGP_SPRETEiJ_G0018570) MGP_SPRETEiJ_G0018571 MGP_SPRETEiJ_G0018572 Foxg1 (MGP_SPRETEiJ_G0018573) #16 MGP_SPRETEiJ_G0018574 #16 MGP_SPRETEiJ_G0018575 Prkd1 (MGP_SPRETEiJ_G0018576) #17 MGP_SPRETEiJ_G0018577 MGP_SPRETEiJ_G0018578 G2e3 (MGP_SPRETEiJ_G0018579) #18 Scfd1 (MGP_SPRETEiJ_G0018580) #19 Coch (MGP_SPRETEiJ_G0018581) #20 Strn3 (MGP_SPRETEiJ_G0018582) #21 Ap4s1 (MGP_SPRETEiJ_G0018583) #22 Hectd1 (MGP_SPRETEiJ_G0018584) #23 Heatr5a (MGP_SPRETEiJ_G0018585) #24 Dtd2 (MGP_SPRETEiJ_G0018586) #25 Gpr33 (MGP_SPRETEiJ_G0018587) #26 Nubpl (MGP_SPRETEiJ_G0018588) #27 Arhgap5 (MGP_SPRETEiJ_G0018589) #28 Akap6 (MGP_SPRETEiJ_G0018590) Npas3 (MGP_SPRETEiJ_G0018591) Egln3 (MGP_SPRETEiJ_G0018592) Sptssa (MGP_SPRETEiJ_G0018593) Eapp (MGP_SPRETEiJ_G0018594) Snx6 (MGP_SPRETEiJ_G0018595) Cfl2 (MGP_SPRETEiJ_G0018596) Baz1a (MGP_SPRETEiJ_G0018597) MGP_SPRETEiJ_G0018598 Ryukyu mouse MODERN SPECIES 3 Immp2l (MGP_CAROLIEiJ_G0017722) Lrrn3 (MGP_CAROLIEiJ_G0017723) Dnajb9 (MGP_CAROLIEiJ_G0017724) Pnpla8 (MGP_CAROLIEiJ_G0017725) Nrcam (MGP_CAROLIEiJ_G0017726) Stxbp6 (MGP_CAROLIEiJ_G0017727) Nova1 (MGP_CAROLIEiJ_G0017728) Foxg1 (MGP_CAROLIEiJ_G0017729) #16 MGP_CAROLIEiJ_G0017730 #16 MGP_CAROLIEiJ_G0017731 Prkd1 (MGP_CAROLIEiJ_G0017732) #17 G2e3 (MGP_CAROLIEiJ_G0017733) #18 Scfd1 (MGP_CAROLIEiJ_G0017734) #19 Coch (MGP_CAROLIEiJ_G0017735) #20 Strn3 (MGP_CAROLIEiJ_G0017736) #21 Ap4s1 (MGP_CAROLIEiJ_G0017737) #22 Hectd1 (MGP_CAROLIEiJ_G0017738) #23 Heatr5a (MGP_CAROLIEiJ_G0017739) #24 Dtd2 (MGP_CAROLIEiJ_G0017740) #25 Gpr33 (MGP_CAROLIEiJ_G0017741) #26 Nubpl (MGP_CAROLIEiJ_G0017742) #27 Arhgap5 (MGP_CAROLIEiJ_G0017743) #28 Akap6 (MGP_CAROLIEiJ_G0017744) Npas3 (MGP_CAROLIEiJ_G0017745) Egln3 (MGP_CAROLIEiJ_G0017746) Sptssa (MGP_CAROLIEiJ_G0017747) Eapp (MGP_CAROLIEiJ_G0017748) Snx6 (MGP_CAROLIEiJ_G0017749) Cfl2 (MGP_CAROLIEiJ_G0017750) Baz1a (MGP_CAROLIEiJ_G0017751) MGP_CAROLIEiJ_G0017752 Shrew mouse MODERN SPECIES 20 Dock4 (MGP_PahariEiJ_G0029478) Immp2l (MGP_PahariEiJ_G0029479) Lrrn3 (MGP_PahariEiJ_G0029480) Dnajb9 (MGP_PahariEiJ_G0029481) Pnpla8 (MGP_PahariEiJ_G0029482) Nrcam (MGP_PahariEiJ_G0029483) Stxbp6 (MGP_PahariEiJ_G0029484) Nova1 (MGP_PahariEiJ_G0029485) Foxg1 (MGP_PahariEiJ_G0029486) #16 MGP_PahariEiJ_G0029487 #16 Prkd1 (MGP_PahariEiJ_G0029488) #17 G2e3 (MGP_PahariEiJ_G0029489) #18 Scfd1 (MGP_PahariEiJ_G0029490) #19 Coch (MGP_PahariEiJ_G0029491) #20 Strn3 (MGP_PahariEiJ_G0029492) #21 Ap4s1 (MGP_PahariEiJ_G0029493) #22 Hectd1 (MGP_PahariEiJ_G0029494) #23 Heatr5a (MGP_PahariEiJ_G0029495) #24 Dtd2 (MGP_PahariEiJ_G0029496) #25 Gpr33 (MGP_PahariEiJ_G0029497) #26 Nubpl (MGP_PahariEiJ_G0029498) #27 Arhgap5 (MGP_PahariEiJ_G0029499) #28 Akap6 (MGP_PahariEiJ_G0029500) Npas3 (MGP_PahariEiJ_G0029501) Egln3 (MGP_PahariEiJ_G0029502) Sptssa (MGP_PahariEiJ_G0029503) Eapp (MGP_PahariEiJ_G0029504) Snx6 (MGP_PahariEiJ_G0029505) Cfl2 (MGP_PahariEiJ_G0029506) Baz1a (MGP_PahariEiJ_G0029507) MGP_PahariEiJ_G0029508 Rat MODERN SPECIES 16 Dnajb9 (ENSRNOG00000004006) ENSRNOG00000064508 Pnpla8 (ENSRNOG00000039091) Nrcam (ENSRNOG00000004067) Stxbp6 (ENSRNOG00000004198) Nova1 (ENSRNOG00000031440) ENSRNOG00000068318 RGD1559629 (ENSRNOG00000031317) Foxg1 (ENSRNOG00000047891) #16 Prkd1 (ENSRNOG00000004165) #17 ENSRNOG00000066628 G2e3 (ENSRNOG00000004232) #18 Scfd1 (ENSRNOG00000031203) #19 Coch (ENSRNOG00000005286) #20 Strn3 (ENSRNOG00000060335) #21 Ap4s1 (ENSRNOG00000005765) #22 Hectd1 (ENSRNOG00000006905) #23 Heatr5a (ENSRNOG00000006483) #24 Dtd2 (ENSRNOG00000006727) #25 Gpr33-ps1 (ENSRNOG00000038990) #26 Nubpl (ENSRNOG00000027444) #27 ENSRNOG00000070950 Arhgap5 (ENSRNOG00000004696) #28 Akap6 (ENSRNOG00000004841) Npas3 (ENSRNOG00000068162) ENSRNOG00000066295 Egln3 (ENSRNOG00000005053) Timm23b (ENSRNOG00000031285) Rps10 (ENSRNOG00000066637) Sptssa (ENSRNOG00000004292) Eapp (ENSRNOG00000004509) Cricetidae ANCESTRAL SPECIES 17 ENSGT00390000010852 ENSGT00940000155659 ENSGT00940000160513 ENSGT00940000164174 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Cricetidae_B ANCESTRAL SPECIES 44 ENSGT00390000010852 ENSGT00940000155659 ENSGT00940000160513 ENSGT00550000075044 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00940000172098 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 Northern American deer mouse MODERN SPECIES 5 ENSPEMG00000030494 Dnajb9 (ENSPEMG00000025224) Pnpla8 (ENSPEMG00000013308) Nrcam (ENSPEMG00000000666) ENSPEMG00000008750 Stxbp6 (ENSPEMG00000006826) Nova1 (ENSPEMG00000006503) Foxg1 (ENSPEMG00000014163) #16 ENSPEMG00000011512 ENSPEMG00000029110 Prkd1 (ENSPEMG00000011695) #17 G2e3 (ENSPEMG00000014724) #18 Scfd1 (ENSPEMG00000013333) #19 Coch (ENSPEMG00000014561) #20 Strn3 (ENSPEMG00000018694) #21 Ap4s1 (ENSPEMG00000028602) #22 Hectd1 (ENSPEMG00000011192) #23 Heatr5a (ENSPEMG00000014455) #24 Dtd2 (ENSPEMG00000020439) #25 Gpr33 (ENSPEMG00000015422) #26 Nubpl (ENSPEMG00000008972) #27 Arhgap5 (ENSPEMG00000000871) #28 Akap6 (ENSPEMG00000012708) Npas3 (ENSPEMG00000012109) Egln3 (ENSPEMG00000005061) Sptssa (ENSPEMG00000030128) ENSPEMG00000017758 Snx6 (ENSPEMG00000021989) ENSPEMG00000028812 Cfl2 (ENSPEMG00000007781) Baz1a (ENSPEMG00000014114) Prairie vole MODERN SPECIES Zfp639 (ENSMOCG00000020301) Kcnmb3 (ENSMOCG00000016804) Pik3ca (ENSMOCG00000013980) Zmat3 (ENSMOCG00000018844) Kcnmb2 (ENSMOCG00000017078) Egfem1 (ENSMOCG00000018732) Mecom (ENSMOCG00000021596) ENSMOCG00000020206 Actrt3 (ENSMOCG00000015666) Mynn (ENSMOCG00000015696) Lrrc34 (ENSMOCG00000016121) ENSMOCG00000005957 Lrriq4 (ENSMOCG00000004550) Coch (ENSMOCG00000019723) #20 ENSMOCG00000012615 #21 Ap4s1 (ENSMOCG00000007389) #22 Hectd1 (ENSMOCG00000014999) #23 Heatr5a (ENSMOCG00000022578) #24 Dtd2 (ENSMOCG00000013778) #25 Nubpl (ENSMOCG00000014184) #27 Arhgap5 (ENSMOCG00000004835) #28 Akap6 (ENSMOCG00000011185) Npas3 (ENSMOCG00000019190) Egln3 (ENSMOCG00000012694) ENSMOCG00000005461 Sptssa (ENSMOCG00000012586) ENSMOCG00000015865 ENSMOCG00000010297 Snx6 (ENSMOCG00000005706) Cfl2 (ENSMOCG00000001143) ENSMOCG00000021225 Cricetinae ANCESTRAL SPECIES 11 ENSGT00390000010852 ENSGT00940000155659 ENSGT00940000160513 ENSGT00550000075044 ENSGT00940000156246 ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000156499 ENSGT00940000155573 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00640000092775 Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001009365 DNAJB9 (ENSCGRG00001006614) Pnpla8 (ENSCGRG00001002943) Nrcam (ENSCGRG00001023691) ENSCGRG00001015987 Stxbp6 (ENSCGRG00001016560) ENSCGRG00001015898 Nova1 (ENSCGRG00001024030) ENSCGRG00001023108 Foxg1 (ENSCGRG00001009864) #16 Prkd1 (ENSCGRG00001019739) #17 G2e3 (ENSCGRG00001015112) #18 Scfd1 (ENSCGRG00001013495) #19 Coch (ENSCGRG00001010363) #20 Strn3 (ENSCGRG00001000550) #21 Ap4s1 (ENSCGRG00001023362) #22 Hectd1 (ENSCGRG00001024884) #23 ENSCGRG00001024436 Heatr5a (ENSCGRG00001017067) #24 Dtd2 (ENSCGRG00001015902) #25 Gpr33 (ENSCGRG00001011244) #26 ENSCGRG00001006641 Nubpl (ENSCGRG00001004006) #27 Arhgap5 (ENSCGRG00001002196) #28 ENSCGRG00001009818 Akap6 (ENSCGRG00001015059) Npas3 (ENSCGRG00001014006) Egln3 (ENSCGRG00001011120) Sptssa (ENSCGRG00001009767) Eapp (ENSCGRG00001019760) Snx6 (ENSCGRG00001015718) Golden Hamster MODERN SPECIES 678 Tmem208 (ENSMAUG00000019912) Fbxl9 (ENSMAUG00000020647) Elmo3 (ENSMAUG00000018747) ENSMAUG00000021932 Pnpla8 (ENSMAUG00000018550) ENSMAUG00000004823 ENSMAUG00000012524 Stxbp6 (ENSMAUG00000009926) ENSMAUG00000000995 Foxg1 (ENSMAUG00000019070) #16 Prkd1 (ENSMAUG00000022213) #17 G2e3 (ENSMAUG00000021191) #18 Scfd1 (ENSMAUG00000003557) #19 ENSMAUG00000013698 #20 Strn3 (ENSMAUG00000021272) #21 ENSMAUG00000021341 #22 Hectd1 (ENSMAUG00000004033) #23 Heatr5a (ENSMAUG00000009777) #24 ENSMAUG00000013425 Dtd2 (ENSMAUG00000016991) #25 ENSMAUG00000014362 #26 Nubpl (ENSMAUG00000016658) #27