Fungi/Metazoa group DUPLICATION Fungi/Metazoa group DUPLICATION Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00970000193421.B #22 Bilateria ANCESTRAL SPECIES ENSGT00970000193421.B #22 Chordata ANCESTRAL SPECIES ENSGT00970000193421.B #22 Vertebrata ANCESTRAL SPECIES ENSGT00970000193421.B #22 Gnathostomata ANCESTRAL SPECIES 2 ENSGT00440000037341.b.a ENSGT00940000159180 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710 ENSGT01090000260005.a.b.a.b.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 Euteleostomi ANCESTRAL SPECIES 18 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.a.b ENSGT00940000154710.a.b.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Sarcopterygii ANCESTRAL SPECIES 44 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000017608 ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Tetrapoda ANCESTRAL SPECIES 51 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Amniota ANCESTRAL SPECIES 8 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Mammalia ANCESTRAL SPECIES 26 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Theria ANCESTRAL SPECIES 14 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Eutheria ANCESTRAL SPECIES 12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Glires ANCESTRAL SPECIES 12 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Rodentia ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Myomorpha ANCESTRAL SPECIES 7 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Muroidea ANCESTRAL SPECIES 54 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Muroidea_A ANCESTRAL SPECIES 15 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Murinae ANCESTRAL SPECIES 8 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Mus ANCESTRAL SPECIES 10 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Shrew mouse MODERN SPECIES 20 Dock4 (MGP_PahariEiJ_G0029478) #7 Immp2l (MGP_PahariEiJ_G0029479) #8 Lrrn3 (MGP_PahariEiJ_G0029480) #9 Dnajb9 (MGP_PahariEiJ_G0029481) #10 Pnpla8 (MGP_PahariEiJ_G0029482) #11 Nrcam (MGP_PahariEiJ_G0029483) #12 Stxbp6 (MGP_PahariEiJ_G0029484) #13 Nova1 (MGP_PahariEiJ_G0029485) #14 Foxg1 (MGP_PahariEiJ_G0029486) #15 MGP_PahariEiJ_G0029487 #16 Prkd1 (MGP_PahariEiJ_G0029488) #17 G2e3 (MGP_PahariEiJ_G0029489) #18 Scfd1 (MGP_PahariEiJ_G0029490) #19 Coch (MGP_PahariEiJ_G0029491) #20 Strn3 (MGP_PahariEiJ_G0029492) #21 Ap4s1 (MGP_PahariEiJ_G0029493) #22 Hectd1 (MGP_PahariEiJ_G0029494) #23 Heatr5a (MGP_PahariEiJ_G0029495) #24 Dtd2 (MGP_PahariEiJ_G0029496) #25 Gpr33 (MGP_PahariEiJ_G0029497) #26 Nubpl (MGP_PahariEiJ_G0029498) #27 Arhgap5 (MGP_PahariEiJ_G0029499) #28 Akap6 (MGP_PahariEiJ_G0029500) #29 Npas3 (MGP_PahariEiJ_G0029501) #30 Egln3 (MGP_PahariEiJ_G0029502) #31 Sptssa (MGP_PahariEiJ_G0029503) #32 Eapp (MGP_PahariEiJ_G0029504) #33 Snx6 (MGP_PahariEiJ_G0029505) #34 Cfl2 (MGP_PahariEiJ_G0029506) #35 Baz1a (MGP_PahariEiJ_G0029507) #36 MGP_PahariEiJ_G0029508 #37 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Mouse MODERN SPECIES 3 Dock4 (ENSMUSG00000035954) #7 Immp2l (ENSMUSG00000056899) #8 Lrrn3 (ENSMUSG00000036295) #9 Dnajb9 (ENSMUSG00000014905) #10 Pnpla8 (ENSMUSG00000036257) #11 Nrcam (ENSMUSG00000020598) #12 Stxbp6 (ENSMUSG00000046314) #13 Nova1 (ENSMUSG00000021047) #14 Foxg1 (ENSMUSG00000020950) #16 Gm43517 (ENSMUSG00000089922) Prkd1 (ENSMUSG00000002688) #17 G2e3 (ENSMUSG00000035293) #18 Scfd1 (ENSMUSG00000020952) #19 Coch (ENSMUSG00000020953) #20 Strn3 (ENSMUSG00000020954) #21 Ap4s1 (ENSMUSG00000020955) #22 Hectd1 (ENSMUSG00000035247) #23 Heatr5a (ENSMUSG00000035181) #24 Dtd2 (ENSMUSG00000020956) #25 Gpr33 (ENSMUSG00000035148) #26 Nubpl (ENSMUSG00000035142) #27 Arhgap5 (ENSMUSG00000035133) #28 Akap6 (ENSMUSG00000061603) #29 Npas3 (ENSMUSG00000021010) #30 Egln3 (ENSMUSG00000035105) #31 Sptssa (ENSMUSG00000044408) #32 Eapp (ENSMUSG00000054302) #33 Snx6 (ENSMUSG00000005656) #34 Cfl2 (ENSMUSG00000062929) #35 Baz1a (ENSMUSG00000035021) #36 2700097O09Rik (ENSMUSG00000062198) Mus_C ANCESTRAL SPECIES 11 ENSGT00940000155659 #7 ENSGT00550000075044 #8 ENSGT00940000160513 #9 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT01100000267143 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Steppe mouse MODERN SPECIES 3314 ENSMSIG00000002590 ENSMSIG00000002603 ENSMSIG00000002627 ENSMSIG00000002727 G2e3 (ENSMSIG00000002770) #18 Scfd1 (ENSMSIG00000003039) #19 Coch (ENSMSIG00000003151) #20 Strn3 (ENSMSIG00000003232) #21 Ap4s1 (ENSMSIG00000003653) #22 Hectd1 (ENSMSIG00000003683) #23 ENSMSIG00000003791 Heatr5a (ENSMSIG00000003804) #24 Dtd2 (ENSMSIG00000003964) #25 Gpr33 (ENSMSIG00000003989) #26 Nubpl (ENSMSIG00000004004) #27 Arhgap5 (ENSMSIG00000004050) #28 Akap6 (ENSMSIG00000004164) #29 Npas3 (ENSMSIG00000004473) #30 ENSMSIG00000004706 ENSMSIG00000004720 Egln3 (ENSMSIG00000004731) #31 ENSMSIG00000004766 spretus MODERN SPECIES 3 Nrcam (MGP_SPRETEiJ_G0018568) #12 Stxbp6 (MGP_SPRETEiJ_G0018569) #13 Nova1 (MGP_SPRETEiJ_G0018570) #14 MGP_SPRETEiJ_G0018571 MGP_SPRETEiJ_G0018572 Foxg1 (MGP_SPRETEiJ_G0018573) #16 MGP_SPRETEiJ_G0018574 #16 MGP_SPRETEiJ_G0018575 Prkd1 (MGP_SPRETEiJ_G0018576) #17 MGP_SPRETEiJ_G0018577 MGP_SPRETEiJ_G0018578 G2e3 (MGP_SPRETEiJ_G0018579) #18 Scfd1 (MGP_SPRETEiJ_G0018580) #19 Coch (MGP_SPRETEiJ_G0018581) #20 Strn3 (MGP_SPRETEiJ_G0018582) #21 Ap4s1 (MGP_SPRETEiJ_G0018583) #22 Hectd1 (MGP_SPRETEiJ_G0018584) #23 Heatr5a (MGP_SPRETEiJ_G0018585) #24 Dtd2 (MGP_SPRETEiJ_G0018586) #25 Gpr33 (MGP_SPRETEiJ_G0018587) #26 Nubpl (MGP_SPRETEiJ_G0018588) #27 Arhgap5 (MGP_SPRETEiJ_G0018589) #28 Akap6 (MGP_SPRETEiJ_G0018590) #29 Npas3 (MGP_SPRETEiJ_G0018591) #30 Egln3 (MGP_SPRETEiJ_G0018592) #31 Sptssa (MGP_SPRETEiJ_G0018593) #32 Eapp (MGP_SPRETEiJ_G0018594) #33 Snx6 (MGP_SPRETEiJ_G0018595) #34 Cfl2 (MGP_SPRETEiJ_G0018596) #35 Baz1a (MGP_SPRETEiJ_G0018597) #36 MGP_SPRETEiJ_G0018598 #37 Ryukyu mouse MODERN SPECIES 3 Immp2l (MGP_CAROLIEiJ_G0017722) #8 Lrrn3 (MGP_CAROLIEiJ_G0017723) #9 Dnajb9 (MGP_CAROLIEiJ_G0017724) #10 Pnpla8 (MGP_CAROLIEiJ_G0017725) #11 Nrcam (MGP_CAROLIEiJ_G0017726) #12 Stxbp6 (MGP_CAROLIEiJ_G0017727) #13 Nova1 (MGP_CAROLIEiJ_G0017728) #14 Foxg1 (MGP_CAROLIEiJ_G0017729) #16 MGP_CAROLIEiJ_G0017730 #16 MGP_CAROLIEiJ_G0017731 Prkd1 (MGP_CAROLIEiJ_G0017732) #17 G2e3 (MGP_CAROLIEiJ_G0017733) #18 Scfd1 (MGP_CAROLIEiJ_G0017734) #19 Coch (MGP_CAROLIEiJ_G0017735) #20 Strn3 (MGP_CAROLIEiJ_G0017736) #21 Ap4s1 (MGP_CAROLIEiJ_G0017737) #22 Hectd1 (MGP_CAROLIEiJ_G0017738) #23 Heatr5a (MGP_CAROLIEiJ_G0017739) #24 Dtd2 (MGP_CAROLIEiJ_G0017740) #25 Gpr33 (MGP_CAROLIEiJ_G0017741) #26 Nubpl (MGP_CAROLIEiJ_G0017742) #27 Arhgap5 (MGP_CAROLIEiJ_G0017743) #28 Akap6 (MGP_CAROLIEiJ_G0017744) #29 Npas3 (MGP_CAROLIEiJ_G0017745) #30 Egln3 (MGP_CAROLIEiJ_G0017746) #31 Sptssa (MGP_CAROLIEiJ_G0017747) #32 Eapp (MGP_CAROLIEiJ_G0017748) #33 Snx6 (MGP_CAROLIEiJ_G0017749) #34 Cfl2 (MGP_CAROLIEiJ_G0017750) #35 Baz1a (MGP_CAROLIEiJ_G0017751) #36 MGP_CAROLIEiJ_G0017752 #37 Rat MODERN SPECIES 16 Dnajb9 (ENSRNOG00000004006) #10 ENSRNOG00000064508 Pnpla8 (ENSRNOG00000039091) #11 Nrcam (ENSRNOG00000004067) #12 Stxbp6 (ENSRNOG00000004198) #13 Nova1 (ENSRNOG00000031440) #14 ENSRNOG00000068318 RGD1559629 (ENSRNOG00000031317) Foxg1 (ENSRNOG00000047891) #16 Prkd1 (ENSRNOG00000004165) #17 ENSRNOG00000066628 G2e3 (ENSRNOG00000004232) #18 Scfd1 (ENSRNOG00000031203) #19 Coch (ENSRNOG00000005286) #20 Strn3 (ENSRNOG00000060335) #21 Ap4s1 (ENSRNOG00000005765) #22 Hectd1 (ENSRNOG00000006905) #23 Heatr5a (ENSRNOG00000006483) #24 Dtd2 (ENSRNOG00000006727) #25 Gpr33-ps1 (ENSRNOG00000038990) #26 Nubpl (ENSRNOG00000027444) #27 ENSRNOG00000070950 Arhgap5 (ENSRNOG00000004696) #28 Akap6 (ENSRNOG00000004841) #29 Npas3 (ENSRNOG00000068162) #30 ENSRNOG00000066295 Egln3 (ENSRNOG00000005053) #31 Timm23b (ENSRNOG00000031285) Rps10 (ENSRNOG00000066637) Sptssa (ENSRNOG00000004292) #32 Eapp (ENSRNOG00000004509) #33 Cricetidae ANCESTRAL SPECIES 17 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00940000160513 #9 ENSGT00940000164174 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Cricetidae_B ANCESTRAL SPECIES 44 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00940000160513 #9 ENSGT00550000075044 #8 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00940000172098 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Northern American deer mouse MODERN SPECIES 5 ENSPEMG00000030494 Dnajb9 (ENSPEMG00000025224) #10 Pnpla8 (ENSPEMG00000013308) #11 Nrcam (ENSPEMG00000000666) #12 ENSPEMG00000008750 Stxbp6 (ENSPEMG00000006826) #13 Nova1 (ENSPEMG00000006503) #14 Foxg1 (ENSPEMG00000014163) #16 ENSPEMG00000011512 ENSPEMG00000029110 Prkd1 (ENSPEMG00000011695) #17 G2e3 (ENSPEMG00000014724) #18 Scfd1 (ENSPEMG00000013333) #19 Coch (ENSPEMG00000014561) #20 Strn3 (ENSPEMG00000018694) #21 Ap4s1 (ENSPEMG00000028602) #22 Hectd1 (ENSPEMG00000011192) #23 Heatr5a (ENSPEMG00000014455) #24 Dtd2 (ENSPEMG00000020439) #25 Gpr33 (ENSPEMG00000015422) #26 Nubpl (ENSPEMG00000008972) #27 Arhgap5 (ENSPEMG00000000871) #28 Akap6 (ENSPEMG00000012708) #29 Npas3 (ENSPEMG00000012109) #30 Egln3 (ENSPEMG00000005061) #31 Sptssa (ENSPEMG00000030128) #32 ENSPEMG00000017758 Snx6 (ENSPEMG00000021989) #34 ENSPEMG00000028812 #34 Cfl2 (ENSPEMG00000007781) #35 Baz1a (ENSPEMG00000014114) #36 Prairie vole MODERN SPECIES Zfp639 (ENSMOCG00000020301) Kcnmb3 (ENSMOCG00000016804) Pik3ca (ENSMOCG00000013980) Zmat3 (ENSMOCG00000018844) Kcnmb2 (ENSMOCG00000017078) Egfem1 (ENSMOCG00000018732) Mecom (ENSMOCG00000021596) ENSMOCG00000020206 Actrt3 (ENSMOCG00000015666) Mynn (ENSMOCG00000015696) Lrrc34 (ENSMOCG00000016121) ENSMOCG00000005957 Lrriq4 (ENSMOCG00000004550) Coch (ENSMOCG00000019723) #20 ENSMOCG00000012615 #21 Ap4s1 (ENSMOCG00000007389) #22 Hectd1 (ENSMOCG00000014999) #23 Heatr5a (ENSMOCG00000022578) #24 Dtd2 (ENSMOCG00000013778) #25 Nubpl (ENSMOCG00000014184) #27 Arhgap5 (ENSMOCG00000004835) #28 Akap6 (ENSMOCG00000011185) #29 Npas3 (ENSMOCG00000019190) #30 Egln3 (ENSMOCG00000012694) #31 ENSMOCG00000005461 Sptssa (ENSMOCG00000012586) #32 ENSMOCG00000015865 ENSMOCG00000010297 Snx6 (ENSMOCG00000005706) #34 Cfl2 (ENSMOCG00000001143) #35 ENSMOCG00000021225 #36 Cricetinae ANCESTRAL SPECIES 11 ENSGT00390000010852 ENSGT00940000155659 #7 ENSGT00940000160513 #9 ENSGT00550000075044 #8 ENSGT00940000156246 #10 ENSGT00940000154738.a #11 ENSGT00940000155419 #12 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001009365 DNAJB9 (ENSCGRG00001006614) #10 Pnpla8 (ENSCGRG00001002943) #11 Nrcam (ENSCGRG00001023691) #12 ENSCGRG00001015987 Stxbp6 (ENSCGRG00001016560) #13 ENSCGRG00001015898 Nova1 (ENSCGRG00001024030) #14 ENSCGRG00001023108 Foxg1 (ENSCGRG00001009864) #16 Prkd1 (ENSCGRG00001019739) #17 G2e3 (ENSCGRG00001015112) #18 Scfd1 (ENSCGRG00001013495) #19 Coch (ENSCGRG00001010363) #20 Strn3 (ENSCGRG00001000550) #21 Ap4s1 (ENSCGRG00001023362) #22 Hectd1 (ENSCGRG00001024884) #23 ENSCGRG00001024436 Heatr5a (ENSCGRG00001017067) #24 Dtd2 (ENSCGRG00001015902) #25 Gpr33 (ENSCGRG00001011244) #26 ENSCGRG00001006641 Nubpl (ENSCGRG00001004006) #27 Arhgap5 (ENSCGRG00001002196) #28 ENSCGRG00001009818 Akap6 (ENSCGRG00001015059) #29 Npas3 (ENSCGRG00001014006) #30 Egln3 (ENSCGRG00001011120) #31 Sptssa (ENSCGRG00001009767) #32 Eapp (ENSCGRG00001019760) #33 Snx6 (ENSCGRG00001015718) #34 Golden Hamster MODERN SPECIES 678 Tmem208 (ENSMAUG00000019912) Fbxl9 (ENSMAUG00000020647) Elmo3 (ENSMAUG00000018747) ENSMAUG00000021932 Pnpla8 (ENSMAUG00000018550) #11 ENSMAUG00000004823 #12 ENSMAUG00000012524 #12 Stxbp6 (ENSMAUG00000009926) #13 ENSMAUG00000000995 #14 Foxg1 (ENSMAUG00000019070) #16 Prkd1 (ENSMAUG00000022213) #17 G2e3 (ENSMAUG00000021191) #18 Scfd1 (ENSMAUG00000003557) #19 ENSMAUG00000013698 #20 Strn3 (ENSMAUG00000021272) #21 ENSMAUG00000021341 #22 Hectd1 (ENSMAUG00000004033) #23 Heatr5a (ENSMAUG00000009777) #24 ENSMAUG00000013425 Dtd2 (ENSMAUG00000016991) #25 ENSMAUG00000014362 #26 Nubpl (ENSMAUG00000016658) #27 Upper Galilee mountains blind mole rat MODERN SPECIES 1046 G2e3 (ENSNGAG00000005306) #18 Scfd1 (ENSNGAG00000016247) #19 Coch (ENSNGAG00000000675) #20 Strn3 (ENSNGAG00000009581) #21 Ap4s1 (ENSNGAG00000016226) #22 Hectd1 (ENSNGAG00000020429) #23 Heatr5a (ENSNGAG00000019811) #24 ENSNGAG00000011221 Lesser Egyptian jerboa MODERN SPECIES 86 Sdr39u1 (ENSJJAG00000019692) ENSJJAG00000004128 ##22 Cma1 (ENSJJAG00000014442) ENSJJAG00000016083 Ctsg (ENSJJAG00000009878) ENSJJAG00000012054 ENSJJAG00000012531 ENSJJAG00000015223 ENSJJAG00000001002 Nova1 (ENSJJAG00000012915) #14 ENSJJAG00000001174 ENSJJAG00000001269 #16 G2e3 (ENSJJAG00000014439) #18 Coch (ENSJJAG00000019025) #20 Strn3 (ENSJJAG00000019703) #21 Ap4s1 (ENSJJAG00000022804) #22 Hectd1 (ENSJJAG00000001344) #23 Heatr5a (ENSJJAG00000019420) #24 ENSJJAG00000015737 #25 ENSJJAG00000019398 Arhgap5 (ENSJJAG00000022832) #28 Egln3 (ENSJJAG00000013045) #31 ENSJJAG00000003660 Sptssa (ENSJJAG00000014413) #32 ENSJJAG00000015801 #33 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 487 ENSDORG00000029359 Prkd1 (ENSDORG00000000354) #17 G2e3 (ENSDORG00000010913) #18 Scfd1 (ENSDORG00000013408) #19 Coch (ENSDORG00000006859) #20 Strn3 (ENSDORG00000006860) #21 ENSDORG00000009468 #22 Hectd1 (ENSDORG00000005774) #23 Heatr5a (ENSDORG00000011883) #24 Dtd2 (ENSDORG00000009945) #25 Nubpl (ENSDORG00000013986) #27 Arhgap5 (ENSDORG00000005120) #28 Akap6 (ENSDORG00000011551) #29 Npas3 (ENSDORG00000000860) #30 Kangaroo rat MODERN SPECIES 456 ENSDORG00000029969 #22 ENSDORG00000008588 ENSDORG00000001970 Naa35 (ENSDORG00000001956) Agtpbp1 (ENSDORG00000011166) ENSDORG00000024497 Ntrk2 (ENSDORG00000007365) ENSDORG00000024890 Slc28a3 (ENSDORG00000008007) Rmi1 (ENSDORG00000028852) ENSDORG00000016024 2210016F16Rik (ENSDORG00000016023) Kif27 (ENSDORG00000011169) Gkap1 (ENSDORG00000026066) Ubqln1 (ENSDORG00000015266) Idnk (ENSDORG00000008263) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Hystricomorpha ANCESTRAL SPECIES 15 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00950000182957.a.a.b ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Naked mole-rat female MODERN SPECIES 11 CIDEB (ENSHGLG00000002818) NOP9 (ENSHGLG00000002852) DHRS1 (ENSHGLG00000037207) RABGGTA (ENSHGLG00000002942) ENSHGLG00000003157 ENSHGLG00000003920 ENSHGLG00000043958 ENSHGLG00000002296 ENSHGLG00000043059 ENSHGLG00000045310 ENSHGLG00000036541 ENSHGLG00000004538 COCH (ENSHGLG00000002211) #20 ENSHGLG00000002072 #21 ENSHGLG00000031903 ENSHGLG00000006911 #22 HECTD1 (ENSHGLG00000004613) #23 ENSHGLG00000038178 HEATR5A (ENSHGLG00000002799) #24 ENSHGLG00000038655 DTD2 (ENSHGLG00000046094) #25 GPR33 (ENSHGLG00000019958) #26 ENSHGLG00000001878 NUBPL (ENSHGLG00000043820) #27 ENSHGLG00000003444 ENSHGLG00000043700 ENSHGLG00000003356 #28 ENSHGLG00000050973 ENSHGLG00000048569 ENSHGLG00000036198 ENSHGLG00000050257 Hystricomorpha_a ANCESTRAL SPECIES 18 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00950000182957.a.a.b ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Guinea pig MODERN SPECIES 77 ENSCPOG00000031139 ENSCPOG00000024606 ENSCPOG00000024349 ENSCPOG00000022248 STXBP6 (ENSCPOG00000033780) #13 NOVA1 (ENSCPOG00000030872) #14 PRKD1 (ENSCPOG00000004855) #17 G2E3 (ENSCPOG00000002781) #18 ENSCPOG00000013059 SCFD1 (ENSCPOG00000007229) #19 COCH (ENSCPOG00000015577) #20 STRN3 (ENSCPOG00000015579) #21 AP4S1 (ENSCPOG00000005118) #22 HECTD1 (ENSCPOG00000013566) #23 ENSCPOG00000036916 HEATR5A (ENSCPOG00000015747) #24 DTD2 (ENSCPOG00000036705) #25 GPR33 (ENSCPOG00000038573) #26 NUBPL (ENSCPOG00000010163) #27 ENSCPOG00000030336 ARHGAP5 (ENSCPOG00000007798) #28 Hystricomorpha_b ANCESTRAL SPECIES 18 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b.t ENSGT01030000234551.k.d.b.a.a.b.s ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00950000182957.a.a.b ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 116 ENSCLAG00000011419 ENSCLAG00000010999 ENSCLAG00000010184 ENSCLAG00000010208 GZMH (ENSCLAG00000010860) ENSCLAG00000010055 STXBP6 (ENSCLAG00000009408) #13 NOVA1 (ENSCLAG00000008948) #14 ENSCLAG00000015104 FOXG1 (ENSCLAG00000011906) #16 PRKD1 (ENSCLAG00000011245) #17 G2E3 (ENSCLAG00000008721) #18 SCFD1 (ENSCLAG00000012279) #19 COCH (ENSCLAG00000011067) #20 ENSCLAG00000011538 #21 ENSCLAG00000009036 #22 HECTD1 (ENSCLAG00000011096) #23 HEATR5A (ENSCLAG00000009555) #24 DTD2 (ENSCLAG00000014737) #25 GPR33 (ENSCLAG00000013344) #26 NUBPL (ENSCLAG00000011929) #27 ARHGAP5 (ENSCLAG00000015975) #28 AKAP6 (ENSCLAG00000013553) #29 NPAS3 (ENSCLAG00000013939) #30 ENSCLAG00000011029 EGLN3 (ENSCLAG00000010720) #31 ENSCLAG00000012005 EAPP (ENSCLAG00000013007) #33 SNX6 (ENSCLAG00000012353) #34 ENSCLAG00000012876 #35 BAZ1A (ENSCLAG00000015173) #36 Long-tailed chinchilla MODERN SPECIES 132 ZNF365 (ENSCLAG00000010746) ADO (ENSCLAG00000010337) EGR2 (ENSCLAG00000009233) ENSCLAG00000010415 NRBF2 (ENSCLAG00000011072) JMJD1C (ENSCLAG00000012242) REEP3 (ENSCLAG00000012622) ENSCLAG00000012770 ENSCLAG00000009474 CTNNA3 (ENSCLAG00000010308) LRRTM3 (ENSCLAG00000011661) DNAJC12 (ENSCLAG00000012847) SIRT1 (ENSCLAG00000015502) HERC4 (ENSCLAG00000016138) MYPN (ENSCLAG00000011004) ENSCLAG00000014026 #22 PBLD (ENSCLAG00000010284) HNRNPH3 (ENSCLAG00000010680) RUFY2 (ENSCLAG00000012405) DNA2 (ENSCLAG00000012086) SLC25A16 (ENSCLAG00000015512) CCAR1 (ENSCLAG00000011807) THBS4 (ENSCLAG00000009452) MTX3 (ENSCLAG00000011076) CMYA5 (ENSCLAG00000009334) TENT2 (ENSCLAG00000010023) HOMER1 (ENSCLAG00000010571) JMY (ENSCLAG00000009333) BHMT (ENSCLAG00000010253) BHMT2 (ENSCLAG00000013633) DMGDH (ENSCLAG00000014854) Degu DUPLICATION Degu MODERN SPECIES 331 ENSODEG00000002423 #22 ENSODEG00000002362 ENSODEG00000002343 ENSODEG00000002260 ENSODEG00000002224 ENSODEG00000002218 Degu MODERN SPECIES 127 ENSODEG00000005143 ENSODEG00000005132 FOXG1 (ENSODEG00000005094) #16 ENSODEG00000019116 ENSODEG00000005027 PRKD1 (ENSODEG00000004844) #17 ENSODEG00000004710 G2E3 (ENSODEG00000004806) #18 SCFD1 (ENSODEG00000004638) #19 COCH (ENSODEG00000004531) #20 STRN3 (ENSODEG00000004497) #21 ENSODEG00000004725 #22 HECTD1 (ENSODEG00000004383) #23 ENSODEG00000019035 HEATR5A (ENSODEG00000003991) #24 ENSODEG00000003834 #25 ENSODEG00000003785 NUBPL (ENSODEG00000008332) #27 ENSODEG00000008269 ENSODEG00000008253 ARHGAP5 (ENSODEG00000008123) #28 AKAP6 (ENSODEG00000008112) #29 ENSODEG00000008077 NPAS3 (ENSODEG00000007900) #30 STRC (ENSODEG00000007474) ENSODEG00000007361 ENSODEG00000005621 #31 Sciuridae ANCESTRAL SPECIES 8 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i ENSGT01030000234551.k.d.b.a.a.a.b.b.b.j ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Marmotini ANCESTRAL SPECIES 15 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Marmotini_b ANCESTRAL SPECIES 108 ENSGT01030000234551.k.d.b.a.a.a.b.b.b.i.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b.j.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00640000092775 #37 Arctic ground squirrel MODERN SPECIES 18 ENSUPAG00010014330 ENSUPAG00010014315 ENSUPAG00010014307 ENSUPAG00010012638 ENSUPAG00010012609 STXBP6 (ENSUPAG00010012595) #13 NOVA1 (ENSUPAG00010012581) #14 ENSUPAG00010012575 FOXG1 (ENSUPAG00010012563) #16 PRKD1 (ENSUPAG00010012522) #17 G2E3 (ENSUPAG00010012503) #18 SCFD1 (ENSUPAG00010012422) #19 COCH (ENSUPAG00010012392) #20 STRN3 (ENSUPAG00010012325) #21 AP4S1 (ENSUPAG00010012317) #22 HECTD1 (ENSUPAG00010012181) #23 HEATR5A (ENSUPAG00010002104) #24 ENSUPAG00010002029 #25 GPR33 (ENSUPAG00010002026) #26 NUBPL (ENSUPAG00010002012) #27 ARHGAP5 (ENSUPAG00010001993) #28 AKAP6 (ENSUPAG00010001952) #29 ENSUPAG00010001945 NPAS3 (ENSUPAG00010001878) #30 EGLN3 (ENSUPAG00010001862) #31 SPTSSA (ENSUPAG00010001850) #32 ENSUPAG00010001845 EAPP (ENSUPAG00010001833) #33 SNX6 (ENSUPAG00010001786) #34 ENSUPAG00010001776 #35 Squirrel DUPLICATION Squirrel MODERN SPECIES 84 ENSSTOG00000011910 ENSSTOG00000022442 AKR1E2 (ENSSTOG00000014534) ENSSTOG00000031995 KLF6 (ENSSTOG00000007751) PITRM1 (ENSSTOG00000006348) PFKP (ENSSTOG00000006311) ADARB2 (ENSSTOG00000014329) WDR37 (ENSSTOG00000014301) ENSSTOG00000023260 IDI2 (ENSSTOG00000010058) ENSSTOG00000010042 LARP4B (ENSSTOG00000000587) DIP2C (ENSSTOG00000012335) ZMYND11 (ENSSTOG00000010061) ENSSTOG00000034561 #22 CHRM3 (ENSSTOG00000021752) RYR2 (ENSSTOG00000014690) MTR (ENSSTOG00000004093) ACTN2 (ENSSTOG00000007354) HEATR1 (ENSSTOG00000007293) LGALS8 (ENSSTOG00000007266) EDARADD (ENSSTOG00000022830) ERO1B (ENSSTOG00000013810) GPR137B (ENSSTOG00000013802) NID1 (ENSSTOG00000015736) LYST (ENSSTOG00000015713) GNG4 (ENSSTOG00000015712) ENSSTOG00000030497 ENSSTOG00000020260 B3GALNT2 (ENSSTOG00000015705) Squirrel DUPLICATION Squirrel MODERN SPECIES 94 ENSSTOG00000023363 ENSSTOG00000029160 ENSSTOG00000027256 ENSSTOG00000023097 STXBP6 (ENSSTOG00000013479) #13 NOVA1 (ENSSTOG00000020788) #14 ENSSTOG00000027642 FOXG1 (ENSSTOG00000024079) #16 PRKD1 (ENSSTOG00000003873) #17 G2E3 (ENSSTOG00000008924) #18 SCFD1 (ENSSTOG00000008939) #19 COCH (ENSSTOG00000000556) #20 STRN3 (ENSSTOG00000010749) #21 ENSSTOG00000010759 #22 HECTD1 (ENSSTOG00000023965) #23 HEATR5A (ENSSTOG00000004620) #24 ENSSTOG00000025562 #25 GPR33 (ENSSTOG00000027164) #26 NUBPL (ENSSTOG00000004688) #27 ARHGAP5 (ENSSTOG00000020291) #28 AKAP6 (ENSSTOG00000024157) #29 NPAS3 (ENSSTOG00000014736) #30 EGLN3 (ENSSTOG00000027368) #31 SPTSSA (ENSSTOG00000025158) #32 ENSSTOG00000005273 #33 SNX6 (ENSSTOG00000030590) #34 ENSSTOG00000001675 #35 BAZ1A (ENSSTOG00000012204) #36 ENSSTOG00000027145 #37 Squirrel MODERN SPECIES 153 PCDH9 (ENSSTOG00000025475) ENSSTOG00000032665 ENSSTOG00000019374 MAGEB18 (ENSSTOG00000010136) ENSSTOG00000026907 ENSSTOG00000033066 ENSSTOG00000031082 ENSSTOG00000026622 ENSSTOG00000026056 #22 IL1RAPL1 (ENSSTOG00000016269) ENSSTOG00000021156 NR0B1 (ENSSTOG00000025906) TASL (ENSSTOG00000027484) ENSSTOG00000008732 TAB3 (ENSSTOG00000027885) ENSSTOG00000020610 ENSSTOG00000028562 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 1 ENSMMMG00000011431 ENSMMMG00000011415 ENSMMMG00000009778 ENSMMMG00000009755 ENSMMMG00000009734 STXBP6 (ENSMMMG00000009706) #13 NOVA1 (ENSMMMG00000009673) #14 ENSMMMG00000009611 #16 PRKD1 (ENSMMMG00000009545) #17 ENSMMMG00000009512 ENSMMMG00000009483 #18 ENSMMMG00000009462 #18 SCFD1 (ENSMMMG00000009409) #19 COCH (ENSMMMG00000009368) #20 STRN3 (ENSMMMG00000007068) #21 AP4S1 (ENSMMMG00000007043) #22 HECTD1 (ENSMMMG00000006978) #23 HEATR5A (ENSMMMG00000006921) #24 DTD2 (ENSMMMG00000006910) #25 GPR33 (ENSMMMG00000006908) #26 NUBPL (ENSMMMG00000006890) #27 ENSMMMG00000006876 ARHGAP5 (ENSMMMG00000006856) #28 ENSMMMG00000006834 #29 ENSMMMG00000006799 #30 EGLN3 (ENSMMMG00000006788) #31 SPTSSA (ENSMMMG00000006776) #32 ENSMMMG00000006766 EAPP (ENSMMMG00000006761) #33 ENSMMMG00000006742 #34 ENSMMMG00000006738 #34 Alpin marmot MODERN SPECIES TRMT6 (ENSMMMG00000000614) CHGB (ENSMMMG00000000597) SHLD1 (ENSMMMG00000000588) GPCPD1 (ENSMMMG00000000455) PROKR2 (ENSMMMG00000000400) CDS2 (ENSMMMG00000000346) ENSMMMG00000000309 TMEM230 (ENSMMMG00000000268) ENSMMMG00000000257 SLC23A2 (ENSMMMG00000000215) RASSF2 (ENSMMMG00000000162) PRND (ENSMMMG00000000142) PRNP (ENSMMMG00000000138) ENSMMMG00000000123 SMOX (ENSMMMG00000000044) ENSMMMG00000023958 #22 PANK2 (ENSMMMG00000023957) MAVS (ENSMMMG00000023955) AP5S1 (ENSMMMG00000023953) CDC25B (ENSMMMG00000023949) CENPB (ENSMMMG00000023947) SPEF1 (ENSMMMG00000023946) ADISSP (ENSMMMG00000023945) HSPA12B (ENSMMMG00000023943) SIGLEC1 (ENSMMMG00000023929) ADAM33 (ENSMMMG00000023924) GFRA4 (ENSMMMG00000023923) ATRN (ENSMMMG00000023922) ENSMMMG00000023921 DNAAF9 (ENSMMMG00000023920) SLC4A11 (ENSMMMG00000023919) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005004402 GZMB (ENSSVLG00005004217) ENSSVLG00005004187 ENSSVLG00005004176 STXBP6 (ENSSVLG00005004162) #13 ENSSVLG00005004148 ENSSVLG00005004139 NOVA1 (ENSSVLG00005004100) #14 FOXG1 (ENSSVLG00005004066) #16 PRKD1 (ENSSVLG00005003998) #17 ENSSVLG00005003953 #18 SCFD1 (ENSSVLG00005003909) #19 ENSSVLG00005003853 #20 ENSSVLG00005003807 #20 STRN3 (ENSSVLG00005003765) #21 AP4S1 (ENSSVLG00005003726) #22 HECTD1 (ENSSVLG00005003644) #23 HEATR5A (ENSSVLG00005003550) #24 DTD2 (ENSSVLG00005003527) #25 GPR33 (ENSSVLG00005003516) #26 NUBPL (ENSSVLG00005003491) #27 ARHGAP5 (ENSSVLG00005003448) #28 AKAP6 (ENSSVLG00005003395) #29 NPAS3 (ENSSVLG00005003199) #30 EGLN3 (ENSSVLG00005003108) #31 ENSSVLG00005003092 ENSSVLG00005003086 ENSSVLG00005003068 ENSSVLG00005003053 #32 ENSSVLG00005003042 #33 ENSSVLG00005003024 Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005000672 ENSSVLG00005000638 ENSSVLG00005000613 CCDC93 (ENSSVLG00005000586) INSIG2 (ENSSVLG00005000562) EN1 (ENSSVLG00005000531) MARCO (ENSSVLG00005000500) C1QL2 (ENSSVLG00005000478) STEAP3 (ENSSVLG00005000464) C2orf76 (ENSSVLG00005000450) DBI (ENSSVLG00005000415) TMEM37 (ENSSVLG00005000377) SCTR (ENSSVLG00005000343) CFAP221 (ENSSVLG00005000301) TMEM177 (ENSSVLG00005000277) ENSSVLG00005000270 #22 PTPN4 (ENSSVLG00005000228) EPB41L5 (ENSSVLG00005024139) TMEM185B (ENSSVLG00005024068) RALB (ENSSVLG00005024049) INHBB (ENSSVLG00005024036) ENSSVLG00005024019 ENSSVLG00005023991 GLI2 (ENSSVLG00005023981) TFCP2L1 (ENSSVLG00005023914) CLASP1 (ENSSVLG00005023791) NIFK (ENSSVLG00005023724) TSN (ENSSVLG00005023674) ENSSVLG00005023632 ENSSVLG00005023597 ENSSVLG00005023566 Lagomorpha ANCESTRAL SPECIES 14 ENSGT00940000160206 ENSGT00940000160923 ENSGT00940000161519 ENSGT00940000162110 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT00940000156499 #13 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Rabbit MODERN SPECIES 8 ENSOCUG00000028992 STXBP6 (ENSOCUG00000005144) #13 ENSOCUG00000033166 ENSOCUG00000026942 NOVA1 (ENSOCUG00000017622) #14 ENSOCUG00000022058 ENSOCUG00000007554 ENSOCUG00000022201 ENSOCUG00000024246 #16 ENSOCUG00000037372 PRKD1 (ENSOCUG00000022585) #17 G2E3 (ENSOCUG00000007824) #18 SCFD1 (ENSOCUG00000007835) #19 COCH (ENSOCUG00000012042) #20 STRN3 (ENSOCUG00000011418) #21 AP4S1 (ENSOCUG00000011430) #22 HECTD1 (ENSOCUG00000003816) #23 ENSOCUG00000002021 HEATR5A (ENSOCUG00000007228) #24 ENSOCUG00000027034 DTD2 (ENSOCUG00000007778) #25 GPR33 (ENSOCUG00000022411) #26 NUBPL (ENSOCUG00000017713) #27 ARHGAP5 (ENSOCUG00000010548) #28 ENSOCUG00000025739 AKAP6 (ENSOCUG00000014205) #29 NPAS3 (ENSOCUG00000010632) #30 ENSOCUG00000008560 #31 ENSOCUG00000024362 EAPP (ENSOCUG00000003226) #33 SNX6 (ENSOCUG00000029421) #34 Pika MODERN SPECIES 5266 AP4S1 (ENSOPRG00000016762) #22 HECTD1 (ENSOPRG00000002296) #23 Tree shrew MODERN SPECIES 5970 ENSTBEG00000015333 #22 Primates ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 Haplorrhini ANCESTRAL SPECIES 12 ENSGT00940000162110 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 Tarsier MODERN SPECIES 7074 COCH (ENSTSYG00000000628) #20 STRN3 (ENSTSYG00000000630) #21 AP4S1 (ENSTSYG00000009655) #22 HECTD1 (ENSTSYG00000009661) #23 ENSTSYG00000035488 ENSTSYG00000006884 #24 ENSTSYG00000029203 Simiiformes ANCESTRAL SPECIES 2 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Catarrhini ANCESTRAL SPECIES 9 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Hominoidea ANCESTRAL SPECIES 12 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Gibbon MODERN SPECIES 14 SDR39U1 (ENSNLEG00000015526) CMA1 (ENSNLEG00000015539) CTSG (ENSNLEG00000035806) GZMH (ENSNLEG00000015576) ENSNLEG00000015562 STXBP6 (ENSNLEG00000031616) #13 ENSNLEG00000034166 NOVA1 (ENSNLEG00000033958) #14 PRKD1 (ENSNLEG00000015603) #17 G2E3 (ENSNLEG00000015614) #18 ENSNLEG00000031681 SCFD1 (ENSNLEG00000015659) #19 ENSNLEG00000028472 COCH (ENSNLEG00000015841) #20 STRN3 (ENSNLEG00000015856) #21 ENSNLEG00000015901 #22 HECTD1 (ENSNLEG00000015912) #23 HEATR5A (ENSNLEG00000015975) #24 ENSNLEG00000027180 ACOT4 (ENSNLEG00000016052) ENSNLEG00000030750 DNAL1 (ENSNLEG00000016062) PNMA1 (ENSNLEG00000016068) ENSNLEG00000033162 MIDEAS (ENSNLEG00000016069) PTGR2 (ENSNLEG00000016076) ZNF410 (ENSNLEG00000016090) FAM161B (ENSNLEG00000016114) COQ6 (ENSNLEG00000016122) ENTPD5 (ENSNLEG00000016159) BBOF1 (ENSNLEG00000016175) Hominidae ANCESTRAL SPECIES 14 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Orangutan MODERN SPECIES 5 CBLN3 (ENSPPYG00000005706) KHNYN (ENSPPYG00000005708) SDR39U1 (ENSPPYG00000031348) CMA1 (ENSPPYG00000005709) CTSG (ENSPPYG00000005710) GZMH (ENSPPYG00000005711) GZMB (ENSPPYG00000005712) STXBP6 (ENSPPYG00000005713) #13 NOVA1 (ENSPPYG00000031227) #14 ENSPPYG00000030410 PRKD1 (ENSPPYG00000005718) #17 G2E3 (ENSPPYG00000005719) #18 SCFD1 (ENSPPYG00000005720) #19 COCH (ENSPPYG00000005721) #20 STRN3 (ENSPPYG00000005722) #21 ENSPPYG00000005723 #22 HECTD1 (ENSPPYG00000005724) #23 HEATR5A (ENSPPYG00000005725) #24 DTD2 (ENSPPYG00000036770) #25 NUBPL (ENSPPYG00000005727) #27 ARHGAP5 (ENSPPYG00000005729) #28 AKAP6 (ENSPPYG00000005730) #29 NPAS3 (ENSPPYG00000005731) #30 EGLN3 (ENSPPYG00000005732) #31 SPTSSA (ENSPPYG00000005733) #32 EAPP (ENSPPYG00000005735) #33 SNX6 (ENSPPYG00000005736) #34 CFL2 (ENSPPYG00000005737) #35 BAZ1A (ENSPPYG00000005738) #36 SRP54 (ENSPPYG00000005739) FAM177A1 (ENSPPYG00000005740) Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Gorilla MODERN SPECIES 5 CTSG (ENSGGOG00000013780) GZMH (ENSGGOG00000012428) GZMB (ENSGGOG00000012986) STXBP6 (ENSGGOG00000005321) #13 ENSGGOG00000038355 NOVA1 (ENSGGOG00000016495) #14 ENSGGOG00000009355 PRKD1 (ENSGGOG00000011852) #17 G2E3 (ENSGGOG00000001924) #18 ENSGGOG00000036427 SCFD1 (ENSGGOG00000011007) #19 ENSGGOG00000024446 COCH (ENSGGOG00000025198) #20 ENSGGOG00000042724 STRN3 (ENSGGOG00000006096) #21 ENSGGOG00000003198 #22 HECTD1 (ENSGGOG00000026552) #23 HEATR5A (ENSGGOG00000000655) #24 DTD2 (ENSGGOG00000043676) #25 GPR33 (ENSGGOG00000026905) #26 NUBPL (ENSGGOG00000009764) #27 ARHGAP5 (ENSGGOG00000002593) #28 ENSGGOG00000042101 AKAP6 (ENSGGOG00000025608) #29 ENSGGOG00000041161 ENSGGOG00000022941 #30 ENSGGOG00000037716 EGLN3 (ENSGGOG00000014900) #31 EAPP (ENSGGOG00000007784) #33 SNX6 (ENSGGOG00000007659) #34 CFL2 (ENSGGOG00000038032) #35 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 Human MODERN SPECIES 5 CBLN3 (ENSG00000139899) KHNYN (ENSG00000100441) SDR39U1 (ENSG00000100445) CMA1 (ENSG00000092009) CTSG (ENSG00000100448) GZMH (ENSG00000100450) GZMB (ENSG00000100453) STXBP6 (ENSG00000168952) #13 NOVA1 (ENSG00000139910) #14 FOXG1 (ENSG00000176165) #16 PRKD1 (ENSG00000184304) #17 G2E3 (ENSG00000092140) #18 SCFD1 (ENSG00000092108) #19 COCH (ENSG00000100473) #20 STRN3 (ENSG00000196792) #21 AP4S1 (ENSG00000100478) #22 HECTD1 (ENSG00000092148) #23 HEATR5A (ENSG00000129493) #24 ENSG00000203546 DTD2 (ENSG00000129480) #25 GPR33 (ENSG00000214943) #26 NUBPL (ENSG00000151413) #27 ARHGAP5 (ENSG00000100852) #28 AKAP6 (ENSG00000151320) #29 NPAS3 (ENSG00000151322) #30 EGLN3 (ENSG00000129521) #31 SPTSSA (ENSG00000165389) #32 EAPP (ENSG00000129518) #33 SNX6 (ENSG00000129515) #34 CFL2 (ENSG00000165410) #35 BAZ1A (ENSG00000198604) #36 Pan ANCESTRAL SPECIES 8 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00390000010721.a.a.a.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 Bonobo MODERN SPECIES 5 CTSG (ENSPPAG00000012631) GZMH (ENSPPAG00000036072) GZMB (ENSPPAG00000041223) ENSPPAG00000029794 #13 ENSPPAG00000033264 NOVA1 (ENSPPAG00000038980) #14 ENSPPAG00000016025 #16 ENSPPAG00000040567 PRKD1 (ENSPPAG00000037023) #17 G2E3 (ENSPPAG00000028644) #18 SCFD1 (ENSPPAG00000042546) #19 ENSPPAG00000037740 ENSPPAG00000038553 COCH (ENSPPAG00000042223) #20 STRN3 (ENSPPAG00000028044) #21 ENSPPAG00000041450 #22 HECTD1 (ENSPPAG00000036559) #23 HEATR5A (ENSPPAG00000034508) #24 DTD2 (ENSPPAG00000029393) #25 GPR33 (ENSPPAG00000016765) #26 ENSPPAG00000033459 ENSPPAG00000034553 #27 ARHGAP5 (ENSPPAG00000037127) #28 AKAP6 (ENSPPAG00000036668) #29 NPAS3 (ENSPPAG00000028096) #30 ENSPPAG00000004989 EGLN3 (ENSPPAG00000018135) #31 EAPP (ENSPPAG00000030095) #33 SNX6 (ENSPPAG00000037141) #34 CFL2 (ENSPPAG00000007558) #35 ENSPPAG00000008100 Chimpanzee MODERN SPECIES 5 CMA1 (ENSPTRG00000006223) CTSG (ENSPTRG00000006224) GZMB (ENSPTRG00000006226) STXBP6 (ENSPTRG00000006227) #13 ENSPTRG00000052577 NOVA1 (ENSPTRG00000006229) #14 FOXG1 (ENSPTRG00000030783) #16 ENSPTRG00000006231 PRKD1 (ENSPTRG00000006232) #17 G2E3 (ENSPTRG00000006234) #18 SCFD1 (ENSPTRG00000006235) #19 ENSPTRG00000052239 ENSPTRG00000047778 COCH (ENSPTRG00000006237) #20 STRN3 (ENSPTRG00000006238) #21 AP4S1 (ENSPTRG00000006239) #22 HECTD1 (ENSPTRG00000006240) #23 HEATR5A (ENSPTRG00000006241) #24 DTD2 (ENSPTRG00000006244) #25 GPR33 (ENSPTRG00000032557) #26 NUBPL (ENSPTRG00000006245) #27 ARHGAP5 (ENSPTRG00000006246) #28 AKAP6 (ENSPTRG00000006247) #29 NPAS3 (ENSPTRG00000006249) #30 ENSPTRG00000043856 EGLN3 (ENSPTRG00000006250) #31 SPTSSA (ENSPTRG00000006251) #32 EAPP (ENSPTRG00000006252) #33 SNX6 (ENSPTRG00000006253) #34 CFL2 (ENSPTRG00000006254) #35 ENSPTRG00000051817 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT01030000234513.A.a.b ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a Macaca ANCESTRAL SPECIES 9 ENSGT00390000011103.B.j ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00900000143774 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00910000147078 ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a ENSGT00940000157785 Macaca_a ANCESTRAL SPECIES 9 ENSGT00390000011103.B.j ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a.a.b.a ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036 ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000160189 Crab-eating macaque MODERN SPECIES 14 CGA (ENSMFAG00000037707) ZNF292 (ENSMFAG00000045756) SMIM8 (ENSMFAG00000000775) ENSMFAG00000053614 C6orf163 (ENSMFAG00000045620) CFAP206 (ENSMFAG00000035889) ENSMFAG00000056350 SLC35A1 (ENSMFAG00000001045) RARS2 (ENSMFAG00000039420) ENSMFAG00000060786 ORC3 (ENSMFAG00000041907) AKIRIN2 (ENSMFAG00000023644) SPACA1 (ENSMFAG00000046308) CNR1 (ENSMFAG00000040164) RNGTT (ENSMFAG00000030988) ENSMFAG00000031569 #22 PNRC1 (ENSMFAG00000046306) ENSMFAG00000054442 ENSMFAG00000059889 SRSF12 (ENSMFAG00000048779) GABRR2 (ENSMFAG00000043423) UBE2J1 (ENSMFAG00000046333) RRAGD (ENSMFAG00000038149) ANKRD6 (ENSMFAG00000034278) LYRM2 (ENSMFAG00000055976) MDN1 (ENSMFAG00000041968) CASP8AP2 (ENSMFAG00000036833) GJA10 (ENSMFAG00000035012) ENSMFAG00000060642 BACH2 (ENSMFAG00000040061) MAP3K7 (ENSMFAG00000035469) Pig-tailed macaque MODERN SPECIES 79 ENSMNEG00000037112 HTR1E (ENSMNEG00000004973) CGA (ENSMNEG00000045132) ZNF292 (ENSMNEG00000043433) SMIM8 (ENSMNEG00000042949) C6orf163 (ENSMNEG00000045491) CFAP206 (ENSMNEG00000029408) SLC35A1 (ENSMNEG00000038937) RARS2 (ENSMNEG00000043383) ORC3 (ENSMNEG00000030771) AKIRIN2 (ENSMNEG00000040114) ENSMNEG00000045243 SPACA1 (ENSMNEG00000040936) ENSMNEG00000023905 RNGTT (ENSMNEG00000040764) ENSMNEG00000035079 #22 ENSMNEG00000000951 ENSMNEG00000002598 SRSF12 (ENSMNEG00000030957) PM20D2 (ENSMNEG00000037852) GABRR1 (ENSMNEG00000016603) GABRR2 (ENSMNEG00000030830) UBE2J1 (ENSMNEG00000028213) RRAGD (ENSMNEG00000033828) ANKRD6 (ENSMNEG00000043528) ENSMNEG00000035722 MDN1 (ENSMNEG00000042497) CASP8AP2 (ENSMNEG00000041673) GJA10 (ENSMNEG00000011947) BACH2 (ENSMNEG00000038521) MAP3K7 (ENSMNEG00000039436) Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00390000008099.w.a.a ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036.fb ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT01060000248564.a.a ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D ENSGT00940000158228.a Cercopithecinae_d ANCESTRAL SPECIES 35 ENSGT01010000222287.B.b.a.a.b ENSGT00390000012242 ENSGT01010000222360.D.b.o.a.a ENSGT00950000183034.C ENSGT00390000011674 ENSGT00390000010837 ENSGT00390000016036.fb ENSGT00950000182827.E ENSGT00530000063407.a ENSGT00390000011376.e.a ENSGT00940000156096 ENSGT00390000004211 ENSGT00940000156953 ENSGT00970000193421.B.w.a #22 ENSGT00530000063881.a.a ENSGT00940000160519 ENSGT00390000003365 ENSGT00940000158591 ENSGT00940000159115.p ENSGT00940000156864 ENSGT00940000156652 ENSGT00950000183031.A.a.b ENSGT00940000155887 ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT00940000153314.a.b.a.k ENSGT01090000260070.D ENSGT00940000158228.a Sooty mangabey MODERN SPECIES 139 HTR1E (ENSCATG00000020218) CGA (ENSCATG00000041749) ENSCATG00000041508 ZNF292 (ENSCATG00000034148) SMIM8 (ENSCATG00000033189) C6orf163 (ENSCATG00000032899) CFAP206 (ENSCATG00000040165) SLC35A1 (ENSCATG00000034961) RARS2 (ENSCATG00000023833) ORC3 (ENSCATG00000043319) AKIRIN2 (ENSCATG00000040852) SPACA1 (ENSCATG00000038646) RNGTT (ENSCATG00000045048) ENSCATG00000044563 #22 PNRC1 (ENSCATG00000042984) SRSF12 (ENSCATG00000030620) PM20D2 (ENSCATG00000028215) GABRR1 (ENSCATG00000044484) ENSCATG00000043258 GABRR2 (ENSCATG00000041117) UBE2J1 (ENSCATG00000039458) RRAGD (ENSCATG00000017528) ANKRD6 (ENSCATG00000034920) LYRM2 (ENSCATG00000038992) MDN1 (ENSCATG00000045011) CASP8AP2 (ENSCATG00000014543) GJA10 (ENSCATG00000005843) BACH2 (ENSCATG00000037186) ENSCATG00000033625 Vervet Monkey MODERN SPECIES 4 CGA (ENSCSAG00000017361) ZNF292 (ENSCSAG00000017359) GJB7 (ENSCSAG00000000195) SMIM8 (ENSCSAG00000017356) C6orf163 (ENSCSAG00000017354) ENSCSAG00000017350 CFAP206 (ENSCSAG00000017348) SLC35A1 (ENSCSAG00000017346) RARS2 (ENSCSAG00000017345) ORC3 (ENSCSAG00000017343) AKIRIN2 (ENSCSAG00000017340) SPACA1 (ENSCSAG00000017335) CNR1 (ENSCSAG00000000194) RNGTT (ENSCSAG00000017333) ENSCSAG00000017330 ENSCSAG00000000193 #22 PNRC1 (ENSCSAG00000017327) SRSF12 (ENSCSAG00000017325) PM20D2 (ENSCSAG00000017322) GABRR1 (ENSCSAG00000017318) GABRR2 (ENSCSAG00000017310) UBE2J1 (ENSCSAG00000017306) RRAGD (ENSCSAG00000017302) ANKRD6 (ENSCSAG00000017299) LYRM2 (ENSCSAG00000017297) ENSCSAG00000017292 ENSCSAG00000017283 ENSCSAG00000017279 CASP8AP2 (ENSCSAG00000017276) GJA10 (ENSCSAG00000000192) BACH2 (ENSCSAG00000017273) Cercopithecinae ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Macaca ANCESTRAL SPECIES ENSGT00970000193421.B.w.b #22 Pig-tailed macaque MODERN SPECIES 548 CMA1 (ENSMNEG00000037233) CTSG (ENSMNEG00000033836) GZMB (ENSMNEG00000030038) STXBP6 (ENSMNEG00000035846) #13 ENSMNEG00000028242 NOVA1 (ENSMNEG00000040302) #14 ENSMNEG00000031451 ENSMNEG00000003788 ENSMNEG00000043357 PRKD1 (ENSMNEG00000015251) #17 G2E3 (ENSMNEG00000033498) #18 SCFD1 (ENSMNEG00000035218) #19 ENSMNEG00000041776 COCH (ENSMNEG00000031522) #20 STRN3 (ENSMNEG00000032023) #21 ENSMNEG00000040344 #22 HECTD1 (ENSMNEG00000001350) #23 HEATR5A (ENSMNEG00000034513) #24 DTD2 (ENSMNEG00000045027) #25 NUBPL (ENSMNEG00000031679) #27 ENSMNEG00000027078 ARHGAP5 (ENSMNEG00000044390) #28 ENSMNEG00000011661 AKAP6 (ENSMNEG00000039858) #29 NPAS3 (ENSMNEG00000034614) #30 ENSMNEG00000019306 EGLN3 (ENSMNEG00000034405) #31 SPTSSA (ENSMNEG00000041970) #32 EAPP (ENSMNEG00000034819) #33 SNX6 (ENSMNEG00000044189) #34 CFL2 (ENSMNEG00000039241) #35 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Macaca ANCESTRAL SPECIES 1 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01050000248456 ENSGT00940000155573 #14 ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.b.b ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 Rhesus MODERN SPECIES 17 GZMB (ENSMMUG00000014381) STXBP6 (ENSMMUG00000015442) #13 ENSMMUG00000050036 ENSMMUG00000055618 NOVA1 (ENSMMUG00000004271) #14 FOXG1 (ENSMMUG00000021444) #16 ENSMMUG00000038390 PRKD1 (ENSMMUG00000022550) #17 ENSMMUG00000062130 ENSMMUG00000062346 ENSMMUG00000064617 G2E3 (ENSMMUG00000019691) #18 SCFD1 (ENSMMUG00000019692) #19 COCH (ENSMMUG00000011514) #20 STRN3 (ENSMMUG00000011515) #21 AP4S1 (ENSMMUG00000003123) #22 HECTD1 (ENSMMUG00000003120) #23 HEATR5A (ENSMMUG00000011779) #24 DTD2 (ENSMMUG00000050472) #25 GPR33 (ENSMMUG00000015703) #26 NUBPL (ENSMMUG00000012726) #27 ENSMMUG00000054094 ENSMMUG00000056320 ARHGAP5 (ENSMMUG00000016346) #28 AKAP6 (ENSMMUG00000015128) #29 ENSMMUG00000062990 NPAS3 (ENSMMUG00000014839) #30 ENSMMUG00000054677 EGLN3 (ENSMMUG00000000040) #31 ENSMMUG00000064654 ENSMMUG00000057166 Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000052065 ENSMFAG00000058625 ENSMFAG00000061901 NOVA1 (ENSMFAG00000035425) #14 ENSMFAG00000031652 ENSMFAG00000060602 ENSMFAG00000048178 ENSMFAG00000061081 FOXG1 (ENSMFAG00000000544) #16 ENSMFAG00000033313 PRKD1 (ENSMFAG00000039957) #17 G2E3 (ENSMFAG00000033929) #18 SCFD1 (ENSMFAG00000039675) #19 COCH (ENSMFAG00000043586) #20 STRN3 (ENSMFAG00000030208) #21 ENSMFAG00000032637 #22 HECTD1 (ENSMFAG00000038044) #23 HEATR5A (ENSMFAG00000031414) #24 DTD2 (ENSMFAG00000044459) #25 GPR33 (ENSMFAG00000038012) #26 ENSMFAG00000062632 ENSMFAG00000054026 NUBPL (ENSMFAG00000038751) #27 ARHGAP5 (ENSMFAG00000000350) #28 AKAP6 (ENSMFAG00000040818) #29 ENSMFAG00000000440 NPAS3 (ENSMFAG00000043431) #30 ENSMFAG00000057891 EGLN3 (ENSMFAG00000036942) #31 ENSMFAG00000058983 SPTSSA (ENSMFAG00000048755) #32 Cercopithecinae_b DUPLICATION Cercopithecinae_b DUPLICATION Cercopithecinae_b ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.a #22 Olive baboon MODERN SPECIES 16 ENSPANG00000050985 HTR1E (ENSPANG00000005474) ENSPANG00000039493 ZNF292 (ENSPANG00000007401) ENSPANG00000020538 C6orf163 (ENSPANG00000006405) CFAP206 (ENSPANG00000024964) SLC35A1 (ENSPANG00000011579) RARS2 (ENSPANG00000000663) ORC3 (ENSPANG00000001079) AKIRIN2 (ENSPANG00000020357) ENSPANG00000039569 SPACA1 (ENSPANG00000023127) CNR1 (ENSPANG00000018644) RNGTT (ENSPANG00000010454) ENSPANG00000013953 #22 PM20D2 (ENSPANG00000020356) SRSF12 (ENSPANG00000016731) GABRR1 (ENSPANG00000020411) GABRR2 (ENSPANG00000010453) UBE2J1 (ENSPANG00000016471) RRAGD (ENSPANG00000021498) ANKRD6 (ENSPANG00000017857) LYRM2 (ENSPANG00000024769) MDN1 (ENSPANG00000033473) CASP8AP2 (ENSPANG00000016264) GJA10 (ENSPANG00000011128) BACH2 (ENSPANG00000006817) MAP3K7 (ENSPANG00000021959) ENSPANG00000045484 ENSPANG00000050211 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.a #22 Drill MODERN SPECIES 896 CFAP206 (ENSMLEG00000030746) SLC35A1 (ENSMLEG00000038798) RARS2 (ENSMLEG00000036913) ORC3 (ENSMLEG00000031406) AKIRIN2 (ENSMLEG00000042845) SPACA1 (ENSMLEG00000000535) RNGTT (ENSMLEG00000036501) ENSMLEG00000025014 #22 PNRC1 (ENSMLEG00000035351) SRSF12 (ENSMLEG00000042204) PM20D2 (ENSMLEG00000034819) GABRR1 (ENSMLEG00000037111) ENSMLEG00000036657 GABRR2 (ENSMLEG00000035249) UBE2J1 (ENSMLEG00000033818) RRAGD (ENSMLEG00000002405) ANKRD6 (ENSMLEG00000035340) LYRM2 (ENSMLEG00000033284) MDN1 (ENSMLEG00000042713) CASP8AP2 (ENSMLEG00000040162) ENSMLEG00000031189 GJA10 (ENSMLEG00000032578) BACH2 (ENSMLEG00000043165) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.b #22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00970000193421.B.x.a.b #22 Drill MODERN SPECIES 1147 ENSMLEG00000033922 PRKD1 (ENSMLEG00000038538) #17 G2E3 (ENSMLEG00000000130) #18 ENSMLEG00000040005 SCFD1 (ENSMLEG00000040452) #19 COCH (ENSMLEG00000041242) #20 STRN3 (ENSMLEG00000002796) #21 ENSMLEG00000027407 #22 HECTD1 (ENSMLEG00000037269) #23 HEATR5A (ENSMLEG00000021879) #24 DTD2 (ENSMLEG00000000901) #25 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x.b #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.pb #34 Cercopithecinae_d ANCESTRAL SPECIES 101 ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00390000011740.o.a.b ENSGT00940000154466.rb.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.x.b #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00910000147374 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Sooty mangabey MODERN SPECIES 186 ENSCATG00000036166 ENSCATG00000016038 FOXG1 (ENSCATG00000017354) #16 ENSCATG00000039455 ENSCATG00000035671 PRKD1 (ENSCATG00000007883) #17 ENSCATG00000022351 G2E3 (ENSCATG00000030515) #18 ENSCATG00000013950 SCFD1 (ENSCATG00000036581) #19 COCH (ENSCATG00000007110) #20 ENSCATG00000029724 STRN3 (ENSCATG00000022375) #21 ENSCATG00000035780 #22 HECTD1 (ENSCATG00000032933) #23 HEATR5A (ENSCATG00000032282) #24 DTD2 (ENSCATG00000031883) #25 NUBPL (ENSCATG00000033880) #27 ENSCATG00000015897 ARHGAP5 (ENSCATG00000035037) #28 ENSCATG00000018768 AKAP6 (ENSCATG00000037210) #29 NPAS3 (ENSCATG00000029945) #30 ENSCATG00000043412 EGLN3 (ENSCATG00000040041) #31 ENSCATG00000030363 SPTSSA (ENSCATG00000029208) #32 EAPP (ENSCATG00000044341) #33 Olive baboon MODERN SPECIES 17 GZMB (ENSPANG00000023854) ENSPANG00000023856 #13 ENSPANG00000040110 ENSPANG00000039253 NOVA1 (ENSPANG00000004891) #14 ENSPANG00000041818 FOXG1 (ENSPANG00000020365) #16 ENSPANG00000020459 ENSPANG00000047513 PRKD1 (ENSPANG00000009943) #17 G2E3 (ENSPANG00000015300) #18 SCFD1 (ENSPANG00000016614) #19 ENSPANG00000038938 COCH (ENSPANG00000011160) #20 STRN3 (ENSPANG00000020458) #21 ENSPANG00000017427 #22 HECTD1 (ENSPANG00000017149) #23 HEATR5A (ENSPANG00000000801) #24 DTD2 (ENSPANG00000021336) #25 GPR33 (ENSPANG00000021666) #26 NUBPL (ENSPANG00000021781) #27 ENSPANG00000047627 ARHGAP5 (ENSPANG00000024272) #28 ENSPANG00000038472 ENSPANG00000038010 AKAP6 (ENSPANG00000022397) #29 NPAS3 (ENSPANG00000021333) #30 EGLN3 (ENSPANG00000047484) #31 ENSPANG00000039055 SPTSSA (ENSPANG00000044993) #32 EAPP (ENSPANG00000018424) #33 Rhinopithecus ANCESTRAL SPECIES 225 ENSGT00940000155573 #14 ENSGT00390000011740.o.a.b ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00930000150950.b.m.a ENSGT00950000183024.a.b.a #17 ENSGT00390000014814.a.b.a.b.a.b ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00930000150941.x.b.a ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b.e #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 554 RNGTT (ENSRBIG00000031371) ENSRBIG00000039603 #22 ENSRBIG00000033270 ENSRBIG00000015851 SRSF12 (ENSRBIG00000029756) PM20D2 (ENSRBIG00000028170) GABRR1 (ENSRBIG00000033754) ENSRBIG00000029173 GABRR2 (ENSRBIG00000033560) UBE2J1 (ENSRBIG00000040894) RRAGD (ENSRBIG00000035825) ENSRBIG00000031594 ANKRD6 (ENSRBIG00000040932) LYRM2 (ENSRBIG00000038797) MDN1 (ENSRBIG00000026947) CASP8AP2 (ENSRBIG00000017037) ENSRBIG00000037272 Black snub-nosed monkey MODERN SPECIES 1258 NOVA1 (ENSRBIG00000026331) #14 ENSRBIG00000043316 FOXG1 (ENSRBIG00000023959) #16 ENSRBIG00000031563 ENSRBIG00000023096 PRKD1 (ENSRBIG00000023650) #17 ENSRBIG00000044315 ENSRBIG00000021976 G2E3 (ENSRBIG00000038648) #18 SCFD1 (ENSRBIG00000035795) #19 COCH (ENSRBIG00000024567) #20 STRN3 (ENSRBIG00000034106) #21 ENSRBIG00000031706 #22 HECTD1 (ENSRBIG00000014027) #23 HEATR5A (ENSRBIG00000035494) #24 DTD2 (ENSRBIG00000031412) #25 NUBPL (ENSRBIG00000033232) #27 ENSRBIG00000038307 ARHGAP5 (ENSRBIG00000016020) #28 AKAP6 (ENSRBIG00000038045) #29 ENSRBIG00000032788 NPAS3 (ENSRBIG00000032686) #30 ENSRBIG00000019858 EGLN3 (ENSRBIG00000039961) #31 SPTSSA (ENSRBIG00000039846) #32 EAPP (ENSRBIG00000044230) #33 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3216 RNGTT (ENSRROG00000030932) ENSRROG00000025341 ENSRROG00000028750 #22 ENSRROG00000037633 ENSRROG00000012648 SRSF12 (ENSRROG00000035967) PM20D2 (ENSRROG00000029139) GABRR1 (ENSRROG00000031005) ENSRROG00000039270 GABRR2 (ENSRROG00000036077) UBE2J1 (ENSRROG00000044687) RRAGD (ENSRROG00000041534) ENSRROG00000027171 ENSRROG00000022559 ANKRD6 (ENSRROG00000043779) LYRM2 (ENSRROG00000005389) MDN1 (ENSRROG00000026180) CASP8AP2 (ENSRROG00000033739) Golden snub-nosed monkey MODERN SPECIES 1802 ENSRROG00000026815 #16 ENSRROG00000040454 ENSRROG00000042434 PRKD1 (ENSRROG00000031270) #17 ENSRROG00000016372 G2E3 (ENSRROG00000040994) #18 ENSRROG00000034261 SCFD1 (ENSRROG00000033120) #19 COCH (ENSRROG00000032576) #20 ENSRROG00000039999 STRN3 (ENSRROG00000044804) #21 ENSRROG00000019504 #22 HECTD1 (ENSRROG00000014728) #23 HEATR5A (ENSRROG00000035401) #24 DTD2 (ENSRROG00000033463) #25 NUBPL (ENSRROG00000045260) #27 ENSRROG00000040570 ENSRROG00000040701 ARHGAP5 (ENSRROG00000043273) #28 Platyrrhini ANCESTRAL SPECIES 4 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT01030000234574.B.c.b.b.h ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.l #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 Mas night monkey MODERN SPECIES 819 KHNYN (ENSANAG00000023698) SDR39U1 (ENSANAG00000026864) CMA1 (ENSANAG00000028506) CTSG (ENSANAG00000025418) GZMH (ENSANAG00000022041) GZMB (ENSANAG00000032891) STXBP6 (ENSANAG00000025116) #13 ENSANAG00000034584 NOVA1 (ENSANAG00000028004) #14 ENSANAG00000028865 PRKD1 (ENSANAG00000032943) #17 G2E3 (ENSANAG00000024605) #18 SCFD1 (ENSANAG00000025849) #19 COCH (ENSANAG00000029746) #20 STRN3 (ENSANAG00000026168) #21 AP4S1 (ENSANAG00000026444) #22 HECTD1 (ENSANAG00000037367) #23 ENSANAG00000035920 #24 ENSANAG00000033419 DTD2 (ENSANAG00000036862) #25 NUBPL (ENSANAG00000036864) #27 ARHGAP5 (ENSANAG00000037055) #28 AKAP6 (ENSANAG00000034900) #29 ENSANAG00000020942 NPAS3 (ENSANAG00000023028) #30 ENSANAG00000020399 EGLN3 (ENSANAG00000037222) #31 ENSANAG00000024247 ENSANAG00000021068 #33 ENSANAG00000030653 SNX6 (ENSANAG00000019855) #34 Cebidae ANCESTRAL SPECIES 3 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.l #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 Cebidae_a ANCESTRAL SPECIES 4 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT01030000234542.b.a.a.b.a.b.k.b ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.k.a #33 ENSGT00940000154940.pb #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Capuchin MODERN SPECIES 104 NOVA1 (ENSCCAG00000026410) #14 FOXG1 (ENSCCAG00000020029) #16 ENSCCAG00000027095 PRKD1 (ENSCCAG00000035438) #17 G2E3 (ENSCCAG00000035971) #18 SCFD1 (ENSCCAG00000032443) #19 COCH (ENSCCAG00000024866) #20 STRN3 (ENSCCAG00000011456) #21 AP4S1 (ENSCCAG00000021787) #22 HECTD1 (ENSCCAG00000012275) #23 HEATR5A (ENSCCAG00000031936) #24 CASP7 (ENSCCAG00000022261) PLEKHS1 (ENSCCAG00000035291) ENSCCAG00000028782 NHLRC2 (ENSCCAG00000025322) CCDC186 (ENSCCAG00000023942) TDRD1 (ENSCCAG00000027375) Bolivian squirrel monkey MODERN SPECIES 52 CTSG (ENSSBOG00000030717) ENSSBOG00000019753 GZMH (ENSSBOG00000026395) GZMB (ENSSBOG00000016642) STXBP6 (ENSSBOG00000022536) #13 ENSSBOG00000033503 NOVA1 (ENSSBOG00000034029) #14 ENSSBOG00000029497 ENSSBOG00000009503 #16 ENSSBOG00000034922 PRKD1 (ENSSBOG00000035413) #17 G2E3 (ENSSBOG00000028363) #18 SCFD1 (ENSSBOG00000031363) #19 COCH (ENSSBOG00000011793) #20 STRN3 (ENSSBOG00000023010) #21 AP4S1 (ENSSBOG00000026649) #22 HECTD1 (ENSSBOG00000026436) #23 ENSSBOG00000033123 HEATR5A (ENSSBOG00000032305) #24 DTD2 (ENSSBOG00000027444) #25 NUBPL (ENSSBOG00000033649) #27 ARHGAP5 (ENSSBOG00000025460) #28 AKAP6 (ENSSBOG00000021858) #29 NPAS3 (ENSSBOG00000021474) #30 EGLN3 (ENSSBOG00000032045) #31 ENSSBOG00000035596 SPTSSA (ENSSBOG00000035589) #32 ENSSBOG00000033003 SNX6 (ENSSBOG00000022890) #34 CFL2 (ENSSBOG00000014011) #35 BAZ1A (ENSSBOG00000028821) #36 Marmoset MODERN SPECIES 1 CMA1 (ENSCJAG00000006344) CTSG (ENSCJAG00000006323) GZMH (ENSCJAG00000006314) GZMB (ENSCJAG00000006291) STXBP6 (ENSCJAG00000045104) #13 ENSCJAG00000069808 NOVA1 (ENSCJAG00000039497) #14 ENSCJAG00000022035 FOXG1 (ENSCJAG00000006213) #16 PRKD1 (ENSCJAG00000006180) #17 G2E3 (ENSCJAG00000006106) #18 SCFD1 (ENSCJAG00000005938) #19 COCH (ENSCJAG00000005886) #20 STRN3 (ENSCJAG00000005822) #21 ENSCJAG00000071091 AP4S1 (ENSCJAG00000005786) #22 HECTD1 (ENSCJAG00000005631) #23 ENSCJAG00000073672 HEATR5A (ENSCJAG00000005593) #24 ENSCJAG00000075200 DTD2 (ENSCJAG00000073851) #25 GPR33 (ENSCJAG00000035428) #26 NUBPL (ENSCJAG00000005582) #27 ARHGAP5 (ENSCJAG00000005538) #28 AKAP6 (ENSCJAG00000005474) #29 NPAS3 (ENSCJAG00000047425) #30 EGLN3 (ENSCJAG00000005424) #31 SPTSSA (ENSCJAG00000086959) #32 ENSCJAG00000032302 EAPP (ENSCJAG00000042239) #33 SNX6 (ENSCJAG00000044761) #34 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Bushbaby MODERN SPECIES 167 STXBP6 (ENSOGAG00000011211) #13 NOVA1 (ENSOGAG00000025938) #14 FOXG1 (ENSOGAG00000029149) #16 PRKD1 (ENSOGAG00000002966) #17 G2E3 (ENSOGAG00000017094) #18 SCFD1 (ENSOGAG00000017096) #19 COCH (ENSOGAG00000004695) #20 STRN3 (ENSOGAG00000004698) #21 AP4S1 (ENSOGAG00000004703) #22 HEATR5A (ENSOGAG00000013052) #24 DTD2 (ENSOGAG00000013060) #25 NUBPL (ENSOGAG00000011550) #27 ARHGAP5 (ENSOGAG00000029734) #28 AKAP6 (ENSOGAG00000001808) #29 NPAS3 (ENSOGAG00000014886) #30 EGLN3 (ENSOGAG00000014893) #31 ENSOGAG00000001254 SPTSSA (ENSOGAG00000030285) #32 EAPP (ENSOGAG00000012492) #33 SNX6 (ENSOGAG00000008020) #34 CFL2 (ENSOGAG00000032321) #35 BAZ1A (ENSOGAG00000002234) #36 ENSOGAG00000031729 SRP54 (ENSOGAG00000012188) Lemuriformes ANCESTRAL SPECIES 8 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b.l ENSGT01030000234551.k.d.b.a.a.a.b.b.b.k ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Mouse lemur MODERN SPECIES 22 CMA1 (ENSMICG00000014279) ENSMICG00000045482 CTSG (ENSMICG00000030692) MYH6 (ENSMICG00000045811) DHRS2 (ENSMICG00000044785) ENSMICG00000010090 ENSMICG00000027192 ENSMICG00000017194 STXBP6 (ENSMICG00000035834) #13 NOVA1 (ENSMICG00000034677) #14 PRKD1 (ENSMICG00000001016) #17 G2E3 (ENSMICG00000014597) #18 SCFD1 (ENSMICG00000004149) #19 COCH (ENSMICG00000003344) #20 STRN3 (ENSMICG00000026845) #21 AP4S1 (ENSMICG00000003359) #22 HECTD1 (ENSMICG00000034057) #23 HEATR5A (ENSMICG00000007619) #24 DTD2 (ENSMICG00000030584) #25 ENSMICG00000027167 NUBPL (ENSMICG00000034340) #27 ARHGAP5 (ENSMICG00000007275) #28 AKAP6 (ENSMICG00000027865) #29 NPAS3 (ENSMICG00000031841) #30 EGLN3 (ENSMICG00000000618) #31 ENSMICG00000047011 ENSMICG00000032213 SPTSSA (ENSMICG00000046623) #32 EAPP (ENSMICG00000044807) #33 KTN1 (ENSMICG00000032329) TBPL2 (ENSMICG00000000943) Lemuriformes_a ANCESTRAL SPECIES 194 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Coquerels sifaka MODERN SPECIES 389 ENSPCOG00000016209 PRKD1 (ENSPCOG00000006865) #17 G2E3 (ENSPCOG00000015511) #18 SCFD1 (ENSPCOG00000025558) #19 ENSPCOG00000012773 COCH (ENSPCOG00000023301) #20 STRN3 (ENSPCOG00000001434) #21 AP4S1 (ENSPCOG00000016646) #22 ENSPCOG00000028456 HECTD1 (ENSPCOG00000020200) #23 HEATR5A (ENSPCOG00000022777) #24 DTD2 (ENSPCOG00000017568) #25 NUBPL (ENSPCOG00000022890) #27 ENSPCOG00000015979 ARHGAP5 (ENSPCOG00000024862) #28 AKAP6 (ENSPCOG00000013700) #29 NPAS3 (ENSPCOG00000020941) #30 ENSPCOG00000015194 #31 SPTSSA (ENSPCOG00000027257) #32 EAPP (ENSPCOG00000021389) #33 Greater bamboo lemur MODERN SPECIES 36 ENSPSMG00000006107 #16 PRKD1 (ENSPSMG00000006073) #17 G2E3 (ENSPSMG00000005984) #18 SCFD1 (ENSPSMG00000005912) #19 COCH (ENSPSMG00000005691) #20 STRN3 (ENSPSMG00000005578) #21 AP4S1 (ENSPSMG00000005555) #22 HECTD1 (ENSPSMG00000005480) #23 HEATR5A (ENSPSMG00000005428) #24 DTD2 (ENSPSMG00000005383) #25 GPR33 (ENSPSMG00000005379) #26 NUBPL (ENSPSMG00000005363) #27 ARHGAP5 (ENSPSMG00000005335) #28 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Pecora ANCESTRAL SPECIES 18 ENSGT01030000234551.k.d.b.a.a.b.i ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a.e.a ENSGT01030000234551.k.d.b.a.a.a.a.f ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a ENSGT01030000234551.k.d.b.b.c.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000163541.g ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 370 ENSCHYG00000018784 #22 Yarkand deer MODERN SPECIES 1064 ENSCHYG00000009018 #22 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 4 LOXL1 (ENSCHYG00000020877) ENSCHYG00000020922 ENSCHYG00000021005 ENSCHYG00000021099 GZMB (ENSCHYG00000021148) STXBP6 (ENSCHYG00000021255) #13 NOVA1 (ENSCHYG00000021362) #14 ENSCHYG00000021616 ENSCHYG00000021647 #16 ENSCHYG00000021689 #17 ENSCHYG00000022162 #18 ENSCHYG00000022282 #19 ENSCHYG00000022664 ENSCHYG00000022706 #20 ENSCHYG00000022798 #21 ENSCHYG00000022926 #22 ENSCHYG00000023105 #23 ENSCHYG00000023175 #24 ENSCHYG00000023238 #25 ENSCHYG00000023264 #26 ENSCHYG00000023278 #27 ENSCHYG00000023411 ENSCHYG00000023459 #28 ENSCHYG00000023691 #17 ENSCHYG00000023954 #18 ENSCHYG00000024112 #19 ENSCHYG00000024190 ENSCHYG00000004572 #20 ENSCHYG00000004693 #21 ENSCHYG00000004784 #22 ENSCHYG00000004808 #23 Yarkand deer MODERN SPECIES 4 ENSCHYG00000022798 #21 ENSCHYG00000022926 #22 ENSCHYG00000023105 #23 ENSCHYG00000023175 #24 ENSCHYG00000023238 #25 ENSCHYG00000023264 #26 ENSCHYG00000023278 #27 ENSCHYG00000023411 ENSCHYG00000023459 #28 ENSCHYG00000023691 #17 ENSCHYG00000023954 #18 ENSCHYG00000024112 #19 ENSCHYG00000024190 ENSCHYG00000004572 #20 ENSCHYG00000004693 #21 ENSCHYG00000004784 #22 ENSCHYG00000004808 #23 ENSCHYG00000004859 #24 ENSCHYG00000005154 #25 ENSCHYG00000005175 #26 ENSCHYG00000005213 #27 ENSCHYG00000005261 ENSCHYG00000005283 #28 ENSCHYG00000005372 #29 ENSCHYG00000005433 #29 NPAS3 (ENSCHYG00000005548) #30 EGLN3 (ENSCHYG00000006118) #31 ENSCHYG00000006192 SPTSSA (ENSCHYG00000006204) #32 ENSCHYG00000006229 EAPP (ENSCHYG00000006243) #33 Yarkand deer MODERN SPECIES 3 ACIN1 (ENSCHYG00000015090) CDH24 (ENSCHYG00000016351) PSMB11 (ENSCHYG00000016390) ENSCHYG00000016436 C14orf93 (ENSCHYG00000016592) AJUBA (ENSCHYG00000016731) HAUS4 (ENSCHYG00000016879) PRMT5 (ENSCHYG00000017109) RBM23 (ENSCHYG00000018246) REM2 (ENSCHYG00000018358) LRP10 (ENSCHYG00000018426) MMP14 (ENSCHYG00000018620) SLC7A7 (ENSCHYG00000018767) ENSCHYG00000018959 OXA1L (ENSCHYG00000019267) ENSCHYG00000019500 #22 ENSCHYG00000019651 ABHD4 (ENSCHYG00000019707) ENSCHYG00000019819 ENSCHYG00000019884 TRDV3 (ENSCHYG00000020003) ENSCHYG00000009457 TRDV2 (ENSCHYG00000009486) ENSCHYG00000009499 OR4E1 (ENSCHYG00000009527) OR4E2 (ENSCHYG00000009552) ENSCHYG00000009578 OR10G3 (ENSCHYG00000009604) ENSCHYG00000009619 SALL2 (ENSCHYG00000009676) METTL3 (ENSCHYG00000009777) Yarkand deer MODERN SPECIES 4 GSKIP (ENSCHYG00000024574) ATG2B (ENSCHYG00000024459) ENSCHYG00000024448 ENSCHYG00000024438 BDKRB1 (ENSCHYG00000024385) ENSCHYG00000024356 ENSCHYG00000024343 TCL1A (ENSCHYG00000024332) ENSCHYG00000024310 GLRX5 (ENSCHYG00000024294) SYNE3 (ENSCHYG00000024117) CLMN (ENSCHYG00000024002) DICER1 (ENSCHYG00000023880) GSC (ENSCHYG00000023856) ENSCHYG00000023818 ENSCHYG00000023780 #22 ENSCHYG00000023693 SERPINA5 (ENSCHYG00000023635) SERPINA12 (ENSCHYG00000023498) ENSCHYG00000023475 SERPINA11 (ENSCHYG00000023440) SERPINA1 (ENSCHYG00000023389) SERPINA6 (ENSCHYG00000023370) SERPINA10 (ENSCHYG00000023333) PPP4R4 (ENSCHYG00000023072) ENSCHYG00000023007 ENSCHYG00000022991 ENSCHYG00000022953 DDX24 (ENSCHYG00000022853) OTUB2 (ENSCHYG00000022809) CCDC197 (ENSCHYG00000022755) Percora_a ANCESTRAL SPECIES 20 ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a.e.a ENSGT01030000234551.k.d.b.a.a.a.a.f ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a ENSGT01030000234551.k.d.b.b.c.a.h ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000163541.g ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Siberian musk deer MODERN SPECIES 1275 NOVA1 (ENSMMSG00000023209) #14 FOXG1 (ENSMMSG00000023196) #16 PRKD1 (ENSMMSG00000023150) #17 G2E3 (ENSMMSG00000023121) #18 SCFD1 (ENSMMSG00000023110) #19 ENSMMSG00000023033 #20 STRN3 (ENSMMSG00000022995) #21 AP4S1 (ENSMMSG00000022976) #22 HECTD1 (ENSMMSG00000022929) #23 ENSMMSG00000022922 HEATR5A (ENSMMSG00000022882) #24 DTD2 (ENSMMSG00000022862) #25 GPR33 (ENSMMSG00000022855) #26 Bovidae ANCESTRAL SPECIES 20 ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a.e.a ENSGT01030000234551.k.d.b.a.a.a.a.f ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a ENSGT01030000234551.k.d.b.b.c.a.h.b.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000163541.g ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Caprinae ANCESTRAL SPECIES 22 ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.c ENSGT01030000234551.k.d.b.a.a.b.i ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a.c ENSGT01030000234551.k.d.b.a.a.a.a.e.a ENSGT01030000234551.k.d.b.a.a.a.a.f ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499.k #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000163541.g ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Goat MODERN SPECIES 13 ENSCHIG00000015005 ENSCHIG00000016245 ENSCHIG00000015715 ENSCHIG00000020332 ENSCHIG00000022005 STXBP6 (ENSCHIG00000018400) #13 ENSCHIG00000026291 NOVA1 (ENSCHIG00000018944) #14 FOXG1 (ENSCHIG00000022539) #16 PRKD1 (ENSCHIG00000017644) #17 ENSCHIG00000019781 G2E3 (ENSCHIG00000025802) #18 SCFD1 (ENSCHIG00000024335) #19 COCH (ENSCHIG00000007305) #20 STRN3 (ENSCHIG00000019005) #21 AP4S1 (ENSCHIG00000016142) #22 HECTD1 (ENSCHIG00000018114) #23 HEATR5A (ENSCHIG00000010796) #24 ENSCHIG00000011637 #25 GPR33 (ENSCHIG00000007857) #26 NUBPL (ENSCHIG00000006710) #27 ARHGAP5 (ENSCHIG00000010874) #28 AKAP6 (ENSCHIG00000024298) #29 NPAS3 (ENSCHIG00000019397) #30 EGLN3 (ENSCHIG00000016948) #31 ENSCHIG00000021678 ENSCHIG00000008804 #32 ENSCHIG00000016213 EAPP (ENSCHIG00000022171) #33 ENSCHIG00000017907 #34 CFL2 (ENSCHIG00000015758) #35 Rambouillet Sheep MODERN SPECIES 9 ENSOARG00020024767 ENSOARG00020003344 ENSOARG00020003394 ENSOARG00020003470 ENSOARG00020003828 ENSOARG00020004153 #13 ENSOARG00020004189 #13 ENSOARG00020004201 NOVA1 (ENSOARG00020004244) #14 FOXG1 (ENSOARG00020004300) #16 PRKD1 (ENSOARG00020004370) #17 G2E3 (ENSOARG00020004595) #18 SCFD1 (ENSOARG00020004656) #19 COCH (ENSOARG00020004770) #20 STRN3 (ENSOARG00020004854) #21 AP4S1 (ENSOARG00020004957) #22 HECTD1 (ENSOARG00020005016) #23 HEATR5A (ENSOARG00020005213) #24 DTD2 (ENSOARG00020005329) #25 GPR33 (ENSOARG00020005349) #26 NUBPL (ENSOARG00020005362) #27 ENSOARG00020005406 ARHGAP5 (ENSOARG00020005438) #28 AKAP6 (ENSOARG00020005604) #29 NPAS3 (ENSOARG00020005668) #30 EGLN3 (ENSOARG00020005770) #31 ENSOARG00020005825 #32 ENSOARG00020005839 #33 SNX6 (ENSOARG00020005948) #34 CFL2 (ENSOARG00020006245) #35 BAZ1A (ENSOARG00020006340) #36 Bovinae ANCESTRAL SPECIES 19 ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a.f ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000154690.p.b ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.l.b #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Bos ANCESTRAL SPECIES 18 ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000154690.p.b ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a ENSGT00390000006205.b #24 ENSGT00940000153431.a.l.b #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.gb #34 ENSGT00950000183000.c.b #35 Bos_a ANCESTRAL SPECIES 10 ENSGT01030000234551.k.d.b.a.a.a.a.e.b.b ENSGT01030000234551.k.d.b.a.a.b.i ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000154690.p.b ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a ENSGT00390000006205.b #24 ENSGT00940000153431.a.l.b #25 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.fb.a #34 ENSGT00940000154940.gb #34 ENSGT00950000183000.c.b #35 Domestic yak MODERN SPECIES 8 ENSBGRG00000005384 ENSBGRG00000005401 ENSBGRG00000005455 ENSBGRG00000005616 STXBP6 (ENSBGRG00000005667) #13 NOVA1 (ENSBGRG00000005746) #14 ENSBGRG00000005891 ENSBGRG00000005905 FOXG1 (ENSBGRG00000005921) #16 PRKD1 (ENSBGRG00000006007) #17 G2E3 (ENSBGRG00000006521) #18 SCFD1 (ENSBGRG00000006679) #19 ENSBGRG00000006918 COCH (ENSBGRG00000006941) #20 STRN3 (ENSBGRG00000007105) #21 AP4S1 (ENSBGRG00000007586) #22 HECTD1 (ENSBGRG00000007751) #23 ENSBGRG00000007953 HEATR5A (ENSBGRG00000007992) #24 DTD2 (ENSBGRG00000008143) #25 NUBPL (ENSBGRG00000008223) #27 ENSBGRG00000008307 ENSBGRG00000008358 ARHGAP5 (ENSBGRG00000008406) #28 AKAP6 (ENSBGRG00000008525) #29 NPAS3 (ENSBGRG00000008650) #30 ENSBGRG00000009008 EGLN3 (ENSBGRG00000009029) #31 SPTSSA (ENSBGRG00000009176) #32 EAPP (ENSBGRG00000009269) #33 CFL2 (ENSBGRG00000009349) #35 Wild yak MODERN SPECIES 298 COCH (ENSBMUG00000012618) #20 STRN3 (ENSBMUG00000012562) #21 AP4S1 (ENSBMUG00000012479) #22 HECTD1 (ENSBMUG00000012439) #23 HEATR5A (ENSBMUG00000012373) #24 DTD2 (ENSBMUG00000012325) #25 ENSBMUG00000012283 Bos_b ANCESTRAL SPECIES 18 ENSGT01030000234551.k.d.b.a.a.b.i ENSGT01030000234551.k.d.b.a.a.b.j ENSGT01030000234551.k.d.b.a.a.a.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a ENSGT00390000006205.b #24 ENSGT00940000153431.a.l.b #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940.gb #34 ENSGT00950000183000.c.b #35 Hybrid Bos Indicus MODERN SPECIES 13 ENSBIXG00005009049 ENSBIXG00005005146 ENSBIXG00005001958 ENSBIXG00005001991 GZMB (ENSBIXG00005002071) STXBP6 (ENSBIXG00005002110) #13 NOVA1 (ENSBIXG00005005044) #14 ENSBIXG00005002282 FOXG1 (ENSBIXG00005002315) #16 PRKD1 (ENSBIXG00005028790) #17 G2E3 (ENSBIXG00005028509) #18 SCFD1 (ENSBIXG00005028488) #19 ENSBIXG00005028450 COCH (ENSBIXG00005028431) #20 STRN3 (ENSBIXG00005004875) #21 AP4S1 (ENSBIXG00005028268) #22 ENSBIXG00005028238 HECTD1 (ENSBIXG00005028215) #23 ENSBIXG00005028130 HEATR5A (ENSBIXG00005028101) #24 ENSBIXG00005027995 #25 GPR33 (ENSBIXG00005027980) #26 NUBPL (ENSBIXG00005027931) #27 ENSBIXG00005004787 ENSBIXG00005027817 ARHGAP5 (ENSBIXG00005027783) #28 AKAP6 (ENSBIXG00005004751) #29 ENSBIXG00005027635 NPAS3 (ENSBIXG00005004743) #30 EGLN3 (ENSBIXG00005004670) #31 SPTSSA (ENSBIXG00005027156) #32 Cow MODERN SPECIES 13 ENSBTAG00000050353 ENSBTAG00000040134 ENSBTAG00000010828 ENSBTAG00000013055 ENSBTAG00000038080 GZMB (ENSBTAG00000010057) STXBP6 (ENSBTAG00000021291) #13 NOVA1 (ENSBTAG00000002170) #14 ENSBTAG00000031558 FOXG1 (ENSBTAG00000011113) #16 PRKD1 (ENSBTAG00000012789) #17 G2E3 (ENSBTAG00000001617) #18 SCFD1 (ENSBTAG00000017565) #19 COCH (ENSBTAG00000021844) #20 STRN3 (ENSBTAG00000021845) #21 AP4S1 (ENSBTAG00000017201) #22 HECTD1 (ENSBTAG00000032477) #23 HEATR5A (ENSBTAG00000022847) #24 ENSBTAG00000038020 #25 GPR33 (ENSBTAG00000010536) #26 NUBPL (ENSBTAG00000044121) #27 ENSBTAG00000055201 ARHGAP5 (ENSBTAG00000027024) #28 AKAP6 (ENSBTAG00000017719) #29 NPAS3 (ENSBTAG00000004462) #30 EGLN3 (ENSBTAG00000008172) #31 SPTSSA (ENSBTAG00000013981) #32 EAPP (ENSBTAG00000003419) #33 SNX6 (ENSBTAG00000012873) #34 CFL2 (ENSBTAG00000015053) #35 BAZ1A (ENSBTAG00000020164) #36 American bison MODERN SPECIES 3159 ENSBBBG00000005060 G2E3 (ENSBBBG00000009177) #18 ENSBBBG00000009180 SCFD1 (ENSBBBG00000019438) #19 COCH (ENSBBBG00000019503) #20 STRN3 (ENSBBBG00000007277) #21 AP4S1 (ENSBBBG00000019582) #22 HECTD1 (ENSBBBG00000019676) #23 HEATR5A (ENSBBBG00000019715) #24 ENSBBBG00000019724 #25 NUBPL (ENSBBBG00000019729) #27 ARHGAP5 (ENSBBBG00000019759) #28 AKAP6 (ENSBBBG00000019789) #29 NPAS3 (ENSBBBG00000007628) #30 Cetacea ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000154563.m.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Blue whale MODERN SPECIES 11 ENSBMSG00010012441 GZMH (ENSBMSG00010012451) ENSBMSG00010012468 GZMB (ENSBMSG00010012482) STXBP6 (ENSBMSG00010012498) #13 NOVA1 (ENSBMSG00010012536) #14 ENSBMSG00010012567 ENSBMSG00010012582 ENSBMSG00010012592 FOXG1 (ENSBMSG00010012602) #16 PRKD1 (ENSBMSG00010012633) #17 ENSBMSG00010012692 #18 SCFD1 (ENSBMSG00010012723) #19 COCH (ENSBMSG00010012783) #20 STRN3 (ENSBMSG00010012838) #21 AP4S1 (ENSBMSG00010012875) #22 HECTD1 (ENSBMSG00010012906) #23 HEATR5A (ENSBMSG00010012932) #24 DTD2 (ENSBMSG00010012949) #25 GPR33 (ENSBMSG00010012958) #26 NUBPL (ENSBMSG00010012964) #27 ARHGAP5 (ENSBMSG00010012978) #28 AKAP6 (ENSBMSG00010013021) #29 NPAS3 (ENSBMSG00010013089) #30 EGLN3 (ENSBMSG00010013202) #31 ENSBMSG00010013221 ENSBMSG00010013231 #33 ENSBMSG00010013245 ENSBMSG00010013286 ENSBMSG00010013306 #33 ENSBMSG00010013323 Odontoceti ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000154563.m.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Sperm whale MODERN SPECIES 2 ENSPCTG00005005862 ENSPCTG00005005891 GZMH (ENSPCTG00005005924) ENSPCTG00005005984 GZMB (ENSPCTG00005006025) STXBP6 (ENSPCTG00005006076) #13 NOVA1 (ENSPCTG00005006112) #14 ENSPCTG00005006193 FOXG1 (ENSPCTG00005006210) #16 PRKD1 (ENSPCTG00005006240) #17 ENSPCTG00005006324 G2E3 (ENSPCTG00005006361) #18 SCFD1 (ENSPCTG00005006460) #19 COCH (ENSPCTG00005006564) #20 STRN3 (ENSPCTG00005006776) #21 AP4S1 (ENSPCTG00005006956) #22 HECTD1 (ENSPCTG00005007027) #23 ENSPCTG00005007130 HEATR5A (ENSPCTG00005007185) #24 DTD2 (ENSPCTG00005007351) #25 GPR33 (ENSPCTG00005007371) #26 ENSPCTG00005007379 ENSPCTG00005007388 NUBPL (ENSPCTG00005007415) #27 ENSPCTG00005007465 ARHGAP5 (ENSPCTG00005007494) #28 AKAP6 (ENSPCTG00005007589) #29 NPAS3 (ENSPCTG00005007723) #30 EGLN3 (ENSPCTG00005008171) #31 SPTSSA (ENSPCTG00005008208) #32 ENSPCTG00005008216 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000154563.m.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B.l #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000015821.h ENSGT00390000002766.b.b #32 ENSGT00390000001332.m #33 ENSGT00940000154940 #34 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT01000000214889 ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00940000154563.m.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B.l #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.m #33 ENSGT00940000178928 ENSGT00940000154940 #34 Monodontidae ANCESTRAL SPECIES 11 ENSGT01100000263511.b.a.a.a.b.a.a.a.b.a.b.a.a.b.a.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00940000154563.m.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00910000147163 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B.l #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.m #33 ENSGT00940000178928 ENSGT00940000154940 #34 Narwhal MODERN SPECIES 308 ENSMMNG00015017063 GZMH (ENSMMNG00015017095) ENSMMNG00015017165 GZMB (ENSMMNG00015017321) STXBP6 (ENSMMNG00015017391) #13 NOVA1 (ENSMMNG00015017472) #14 ENSMMNG00015017696 ENSMMNG00015017733 FOXG1 (ENSMMNG00015017758) #16 PRKD1 (ENSMMNG00015017800) #17 G2E3 (ENSMMNG00015017922) #18 SCFD1 (ENSMMNG00015017990) #19 ENSMMNG00015018060 COCH (ENSMMNG00015018104) #20 STRN3 (ENSMMNG00015018258) #21 AP4S1 (ENSMMNG00015018404) #22 HECTD1 (ENSMMNG00015018463) #23 HEATR5A (ENSMMNG00015018679) #24 DTD2 (ENSMMNG00015018797) #25 GPR33 (ENSMMNG00015018815) #26 NUBPL (ENSMMNG00015018841) #27 ENSMMNG00015018891 ARHGAP5 (ENSMMNG00015018917) #28 AKAP6 (ENSMMNG00015018988) #29 NPAS3 (ENSMMNG00015019078) #30 EGLN3 (ENSMMNG00015019291) #31 SPTSSA (ENSMMNG00015019349) #32 ENSMMNG00015019371 #33 ENSMMNG00015019404 SNX6 (ENSMMNG00015019443) #34 CFL2 (ENSMMNG00015019505) #35 Beluga whale MODERN SPECIES 44 ENSDLEG00000018089 ENSDLEG00000018087 GZMH (ENSDLEG00000018044) ENSDLEG00000017935 GZMB (ENSDLEG00000017882) STXBP6 (ENSDLEG00000017850) #13 NOVA1 (ENSDLEG00000017821) #14 ENSDLEG00000017806 ENSDLEG00000017774 FOXG1 (ENSDLEG00000017768) #16 PRKD1 (ENSDLEG00000017654) #17 G2E3 (ENSDLEG00000017592) #18 SCFD1 (ENSDLEG00000016160) #19 COCH (ENSDLEG00000015954) #20 STRN3 (ENSDLEG00000015905) #21 AP4S1 (ENSDLEG00000015895) #22 HECTD1 (ENSDLEG00000015830) #23 HEATR5A (ENSDLEG00000013600) #24 DTD2 (ENSDLEG00000013452) #25 GPR33 (ENSDLEG00000013450) #26 NUBPL (ENSDLEG00000013432) #27 ENSDLEG00000012791 ARHGAP5 (ENSDLEG00000012779) #28 ENSDLEG00000012755 #29 ENSDLEG00000012743 #29 ENSDLEG00000012728 NPAS3 (ENSDLEG00000012702) #30 EGLN3 (ENSDLEG00000012687) #31 ENSDLEG00000012666 SPTSSA (ENSDLEG00000012661) #32 ENSDLEG00000012640 Vaquita MODERN SPECIES 11 GZMH (ENSPSNG00000014903) ENSPSNG00000015017 GZMB (ENSPSNG00000015289) STXBP6 (ENSPSNG00000015449) #13 NOVA1 (ENSPSNG00000015532) #14 ENSPSNG00000015685 ENSPSNG00000015742 ENSPSNG00000015766 FOXG1 (ENSPSNG00000015806) #16 PRKD1 (ENSPSNG00000015859) #17 G2E3 (ENSPSNG00000015993) #18 SCFD1 (ENSPSNG00000016119) #19 ENSPSNG00000016285 COCH (ENSPSNG00000016321) #20 STRN3 (ENSPSNG00000016653) #21 AP4S1 (ENSPSNG00000016811) #22 HECTD1 (ENSPSNG00000016911) #23 HEATR5A (ENSPSNG00000017090) #24 DTD2 (ENSPSNG00000017275) #25 NUBPL (ENSPSNG00000017395) #27 ENSPSNG00000017433 ARHGAP5 (ENSPSNG00000017472) #28 AKAP6 (ENSPSNG00000017615) #29 NPAS3 (ENSPSNG00000017739) #30 EGLN3 (ENSPSNG00000018355) #31 ENSPSNG00000018446 SPTSSA (ENSPSNG00000018482) #32 ENSPSNG00000018496 ENSPSNG00000018519 #33 ENSPSNG00000018564 SNX6 (ENSPSNG00000018667) #34 Dolphin MODERN SPECIES 3098 AP4S1 (ENSTTRG00000003740) #22 HECTD1 (ENSTTRG00000003749) #23 HEATR5A (ENSTTRG00000003780) #24 DTD2 (ENSTTRG00000003788) #25 Camelidae ANCESTRAL SPECIES 41 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Arabian camel MODERN SPECIES 32 SDR39U1 (ENSCDRG00005007148) ENSCDRG00005007233 ENSCDRG00005007274 CTSG (ENSCDRG00005007532) GZMB (ENSCDRG00005007583) ENSCDRG00005007809 ENSCDRG00005012488 STXBP6 (ENSCDRG00005012893) #13 NOVA1 (ENSCDRG00005012968) #14 ENSCDRG00005013058 #16 PRKD1 (ENSCDRG00005013080) #17 G2E3 (ENSCDRG00005013242) #18 SCFD1 (ENSCDRG00005013449) #19 COCH (ENSCDRG00005013624) #20 STRN3 (ENSCDRG00005013738) #21 AP4S1 (ENSCDRG00005014200) #22 HECTD1 (ENSCDRG00005014317) #23 ENSCDRG00005014715 HEATR5A (ENSCDRG00005014747) #24 DTD2 (ENSCDRG00005015091) #25 GPR33 (ENSCDRG00005015130) #26 NUBPL (ENSCDRG00005015152) #27 ARHGAP5 (ENSCDRG00005015272) #28 AKAP6 (ENSCDRG00005015475) #29 ENSCDRG00005015572 #30 EGLN3 (ENSCDRG00005015624) #31 ENSCDRG00005015685 EAPP (ENSCDRG00005015710) #33 SNX6 (ENSCDRG00005015791) #34 CFL2 (ENSCDRG00005016024) #35 BAZ1A (ENSCDRG00005016142) #36 Alpaca MODERN SPECIES 3130 G2E3 (ENSVPAG00000011672) #18 SCFD1 (ENSVPAG00000011674) #19 COCH (ENSVPAG00000011675) #20 STRN3 (ENSVPAG00000011677) #21 AP4S1 (ENSVPAG00000011678) #22 HECTD1 (ENSVPAG00000011679) #23 HEATR5A (ENSVPAG00000011680) #24 DTD2 (ENSVPAG00000011684) #25 NUBPL (ENSVPAG00000011685) #27 Suina ANCESTRAL SPECIES 30 ENSGT00940000160923 ENSGT00940000161519 ENSGT00940000162110 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Chacoan peccary MODERN SPECIES 883 KHNYN (ENSCWAG00000017079) SDR39U1 (ENSCWAG00000017148) ENSCWAG00000017344 CTSG (ENSCWAG00000019691) GZMH (ENSCWAG00000019725) GZMB (ENSCWAG00000019878) STXBP6 (ENSCWAG00000019905) #13 ENSCWAG00000019934 NOVA1 (ENSCWAG00000019948) #14 FOXG1 (ENSCWAG00000020028) #16 PRKD1 (ENSCWAG00000020049) #17 G2E3 (ENSCWAG00000020142) #18 SCFD1 (ENSCWAG00000020229) #19 COCH (ENSCWAG00000020293) #20 STRN3 (ENSCWAG00000020364) #21 AP4S1 (ENSCWAG00000020431) #22 HECTD1 (ENSCWAG00000020463) #23 HEATR5A (ENSCWAG00000020563) #24 DTD2 (ENSCWAG00000020644) #25 GPR33 (ENSCWAG00000020655) #26 NUBPL (ENSCWAG00000020665) #27 ARHGAP5 (ENSCWAG00000020683) #28 AKAP6 (ENSCWAG00000020720) #29 NPAS3 (ENSCWAG00000020800) #30 EGLN3 (ENSCWAG00000021081) #31 SPTSSA (ENSCWAG00000021089) #32 EAPP (ENSCWAG00000021095) #33 SNX6 (ENSCWAG00000021128) #34 CFL2 (ENSCWAG00000021171) #35 BAZ1A (ENSCWAG00000021194) #36 ENSCWAG00000021220 Pig MODERN SPECIES 15 ENSSSCG00000029370 GZMH (ENSSSCG00000001978) GZMB (ENSSSCG00000059880) STXBP6 (ENSSSCG00000001977) #13 ENSSSCG00000042858 ENSSSCG00000050140 NOVA1 (ENSSSCG00000024396) #14 ENSSSCG00000046287 FOXG1 (ENSSSCG00000033761) #16 ENSSSCG00000047109 PRKD1 (ENSSSCG00000001975) #17 G2E3 (ENSSSCG00000001974) #18 SCFD1 (ENSSSCG00000001973) #19 COCH (ENSSSCG00000022679) #20 STRN3 (ENSSSCG00000040657) #21 AP4S1 (ENSSSCG00000001972) #22 HECTD1 (ENSSSCG00000001971) #23 ENSSSCG00000001970 #24 ENSSSCG00000061987 #24 DTD2 (ENSSSCG00000026663) #25 GPR33 (ENSSSCG00000025131) #26 ENSSSCG00000044304 NUBPL (ENSSSCG00000001968) #27 ARHGAP5 (ENSSSCG00000001966) #28 AKAP6 (ENSSSCG00000024517) #29 NPAS3 (ENSSSCG00000001964) #30 ENSSSCG00000036652 EGLN3 (ENSSSCG00000001963) #31 SPTSSA (ENSSSCG00000060304) #32 EAPP (ENSSSCG00000001960) #33 SNX6 (ENSSSCG00000040912) #34 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Carnivora ANCESTRAL SPECIES ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Felidae ANCESTRAL SPECIES 1 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a.d #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Panthera DUPLICATION Panthera DUPLICATION Panthera ANCESTRAL SPECIES 3 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a.d #21 ENSGT00970000193421.B.c.a #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Panthera_a ANCESTRAL SPECIES 7 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00530000063666.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a.d #21 ENSGT00970000193421.B.d #22 ENSGT00950000183095.a.a.c #21 ENSGT00970000193421.B.c.a #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 leopard MODERN SPECIES 112 ENSPPRG00000012178 ENSPPRG00000012344 #16 PRKD1 (ENSPPRG00000012056) #17 G2E3 (ENSPPRG00000011841) #18 SCFD1 (ENSPPRG00000011656) #19 ENSPPRG00000011631 COCH (ENSPPRG00000011542) #20 ENSPPRG00000011448 #21 ENSPPRG00000011315 #21 ENSPPRG00000011288 #22 HECTD1 (ENSPPRG00000011166) #23 HEATR5A (ENSPPRG00000010977) #24 DTD2 (ENSPPRG00000010899) #25 NUBPL (ENSPPRG00000010686) #27 ENSPPRG00000010606 ARHGAP5 (ENSPPRG00000010531) #28 AKAP6 (ENSPPRG00000010405) #29 NPAS3 (ENSPPRG00000010049) #30 EGLN3 (ENSPPRG00000009618) #31 EAPP (ENSPPRG00000009599) #33 Tiger MODERN SPECIES 578 KHNYN (ENSPTIG00000018107) SDR39U1 (ENSPTIG00000020216) CMA1 (ENSPTIG00000021159) ENSPTIG00000021407 CTSG (ENSPTIG00000021808) GZMH (ENSPTIG00000021936) GZMB (ENSPTIG00000000297) STXBP6 (ENSPTIG00000006999) #13 NOVA1 (ENSPTIG00000009518) #14 ENSPTIG00000004679 #16 PRKD1 (ENSPTIG00000011129) #17 G2E3 (ENSPTIG00000013202) #18 SCFD1 (ENSPTIG00000015762) #19 COCH (ENSPTIG00000017113) #20 STRN3 (ENSPTIG00000018841) #21 ENSPTIG00000019757 #22 HECTD1 (ENSPTIG00000020313) #23 ENSPTIG00000000922 HEATR5A (ENSPTIG00000003357) #24 DTD2 (ENSPTIG00000008518) #25 NUBPL (ENSPTIG00000009627) #27 ARHGAP5 (ENSPTIG00000011092) #28 AKAP6 (ENSPTIG00000012016) #29 NPAS3 (ENSPTIG00000015688) #30 EGLN3 (ENSPTIG00000017846) #31 EAPP (ENSPTIG00000018266) #33 Panthera ANCESTRAL SPECIES 75 ENSGT00940000159568 ENSGT00390000012178.g.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00970000193421.B.c.b #22 Tiger MODERN SPECIES 336 ATP7A (ENSPTIG00000021533) COX7B (ENSPTIG00000021523) MAGT1 (ENSPTIG00000021447) ATRX (ENSPTIG00000021388) FGF16 (ENSPTIG00000021358) ENSPTIG00000021338 #22 Panthera_a ANCESTRAL SPECIES 90 ENSGT00940000159568 ENSGT00390000012178.g.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00970000193421.B.c.b #22 leopard MODERN SPECIES 191 ENSPPRG00000024369 ATP7A (ENSPPRG00000024314) COX7B (ENSPPRG00000024301) MAGT1 (ENSPPRG00000024285) ATRX (ENSPPRG00000024247) FGF16 (ENSPPRG00000024226) ENSPPRG00000024213 #22 Panthera ANCESTRAL SPECIES ENSGT00970000193421.B.d #22 Panthera_a ANCESTRAL SPECIES 7 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00530000063666.a.d ENSGT00940000159386 #20 ENSGT00950000183095.a.a.d #21 ENSGT00970000193421.B.d #22 ENSGT00950000183095.a.a.c #21 ENSGT00970000193421.B.c.a #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 lion MODERN SPECIES 6 CMA1 (ENSPLOG00000020413) ENSPLOG00000020469 CTSG (ENSPLOG00000020586) GZMH (ENSPLOG00000020636) ENSPLOG00000020744 STXBP6 (ENSPLOG00000020897) #13 ENSPLOG00000020942 #14 ENSPLOG00000020986 #16 ENSPLOG00000021005 PRKD1 (ENSPLOG00000021084) #17 G2E3 (ENSPLOG00000000330) #18 SCFD1 (ENSPLOG00000000380) #19 ENSPLOG00000000466 COCH (ENSPLOG00000000512) #20 STRN3 (ENSPLOG00000000594) #21 AP4S1 (ENSPLOG00000000730) #22 HECTD1 (ENSPLOG00000000806) #23 HEATR5A (ENSPLOG00000000896) #24 DTD2 (ENSPLOG00000000933) #25 GPR33 (ENSPLOG00000000949) #26 NUBPL (ENSPLOG00000000974) #27 ARHGAP5 (ENSPLOG00000001022) #28 AKAP6 (ENSPLOG00000001171) #29 NPAS3 (ENSPLOG00000001299) #30 ENSPLOG00000001420 EGLN3 (ENSPLOG00000001437) #31 ENSPLOG00000001468 SPTSSA (ENSPLOG00000001474) #32 EAPP (ENSPLOG00000001486) #33 ENSPLOG00000001525 #34 ENSPLOG00000001550 #35 Cat DUPLICATION Cat MODERN SPECIES 237 CMA1 (ENSFCAG00000005607) ENSFCAG00000008194 CTSG (ENSFCAG00000046114) GZMB (ENSFCAG00000002893) ENSFCAG00000013499 STXBP6 (ENSFCAG00000022477) #13 NOVA1 (ENSFCAG00000004226) #14 ENSFCAG00000048489 FOXG1 (ENSFCAG00000044917) #16 ENSFCAG00000053196 PRKD1 (ENSFCAG00000014491) #17 G2E3 (ENSFCAG00000001645) #18 SCFD1 (ENSFCAG00000028507) #19 COCH (ENSFCAG00000011638) #20 STRN3 (ENSFCAG00000013708) #21 AP4S1 (ENSFCAG00000005738) #22 HECTD1 (ENSFCAG00000001734) #23 ENSFCAG00000038310 HEATR5A (ENSFCAG00000014756) #24 DTD2 (ENSFCAG00000031441) #25 GPR33 (ENSFCAG00000030877) #26 NUBPL (ENSFCAG00000024538) #27 ARHGAP5 (ENSFCAG00000024536) #28 AKAP6 (ENSFCAG00000010934) #29 NPAS3 (ENSFCAG00000041731) #30 EGLN3 (ENSFCAG00000040826) #31 ENSFCAG00000023772 SPTSSA (ENSFCAG00000042893) #32 EAPP (ENSFCAG00000030251) #33 SNX6 (ENSFCAG00000018851) #34 CFL2 (ENSFCAG00000008480) #35 Cat MODERN SPECIES 252 ENSFCAG00000018360 TBX22 (ENSFCAG00000002301) ITM2A (ENSFCAG00000007957) P2RY10 (ENSFCAG00000035535) CYSLTR1 (ENSFCAG00000024786) ENSFCAG00000022156 TAF9B (ENSFCAG00000025493) ENSFCAG00000013209 ENSFCAG00000034406 ENSFCAG00000053752 ATP7A (ENSFCAG00000022051) COX7B (ENSFCAG00000033601) MAGT1 (ENSFCAG00000024932) ATRX (ENSFCAG00000030040) FGF16 (ENSFCAG00000029609) ENSFCAG00000025177 #22 PBDC1 (ENSFCAG00000027255) MAGEE2 (ENSFCAG00000027322) ZDHHC15 (ENSFCAG00000014128) ENSFCAG00000042637 ENSFCAG00000034660 ENSFCAG00000049082 UPRT (ENSFCAG00000015059) ENSFCAG00000025696 ABCB7 (ENSFCAG00000009557) RLIM (ENSFCAG00000003136) SLC16A2 (ENSFCAG00000008075) ZCCHC13 (ENSFCAG00000034344) ENSFCAG00000034997 ENSFCAG00000040388 ENSFCAG00000022629 Caniformia ANCESTRAL SPECIES 15 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Ursidae ANCESTRAL SPECIES 10 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000011943.a.a.b ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Ursus ANCESTRAL SPECIES 202 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000011943.a.a.b ENSGT00390000006205.b #24 ENSGT00390000016972.a.a.b.b.a ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000001332 #33 American black bear MODERN SPECIES 3121 AP4S1 (ENSUAMG00000014792) #22 HECTD1 (ENSUAMG00000014859) #23 ENSUAMG00000016611 Polar bear MODERN SPECIES 413 ENSUMAG00000005579 #16 ENSUMAG00000005585 PRKD1 (ENSUMAG00000005703) #17 G2E3 (ENSUMAG00000006635) #18 SCFD1 (ENSUMAG00000006644) #19 COCH (ENSUMAG00000006665) #20 STRN3 (ENSUMAG00000006765) #21 AP4S1 (ENSUMAG00000007515) #22 HECTD1 (ENSUMAG00000007523) #23 ENSUMAG00000007548 HEATR5A (ENSUMAG00000007915) #24 ENSUMAG00000010111 ENSUMAG00000010115 #25 GPR33 (ENSUMAG00000010119) #26 NUBPL (ENSUMAG00000010133) #27 ARHGAP5 (ENSUMAG00000010158) #28 ENSUMAG00000010161 AKAP6 (ENSUMAG00000010177) #29 NPAS3 (ENSUMAG00000010286) #30 EGLN3 (ENSUMAG00000010391) #31 EAPP (ENSUMAG00000010403) #33 Giant Panda MODERN SPECIES 12 CMA1 (ENSAMEG00000015898) ENSAMEG00000015886 CTSG (ENSAMEG00000029866) GZMB (ENSAMEG00000015872) ENSAMEG00000025225 STXBP6 (ENSAMEG00000015837) #13 NOVA1 (ENSAMEG00000015330) #14 ENSAMEG00000024395 FOXG1 (ENSAMEG00000025179) #16 ENSAMEG00000004988 PRKD1 (ENSAMEG00000004991) #17 G2E3 (ENSAMEG00000005054) #18 SCFD1 (ENSAMEG00000005072) #19 COCH (ENSAMEG00000015859) #20 STRN3 (ENSAMEG00000015829) #21 AP4S1 (ENSAMEG00000015823) #22 HECTD1 (ENSAMEG00000015770) #23 ENSAMEG00000028378 HEATR5A (ENSAMEG00000015736) #24 DTD2 (ENSAMEG00000024284) #25 GPR33 (ENSAMEG00000019764) #26 NUBPL (ENSAMEG00000015724) #27 ARHGAP5 (ENSAMEG00000015709) #28 AKAP6 (ENSAMEG00000015685) #29 NPAS3 (ENSAMEG00000029238) #30 EGLN3 (ENSAMEG00000023682) #31 SPTSSA (ENSAMEG00000028071) #32 EAPP (ENSAMEG00000006454) #33 SNX6 (ENSAMEG00000015476) #34 CFL2 (ENSAMEG00000015508) #35 BAZ1A (ENSAMEG00000015512) #36 Mustelinae ANCESTRAL SPECIES 32 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 American mink MODERN SPECIES 84 ENSNVIG00000004128 ENSNVIG00000004119 ENSNVIG00000004111 #16 PRKD1 (ENSNVIG00000003993) #17 G2E3 (ENSNVIG00000003931) #18 SCFD1 (ENSNVIG00000003759) #19 COCH (ENSNVIG00000003618) #20 STRN3 (ENSNVIG00000003579) #21 AP4S1 (ENSNVIG00000003530) #22 HECTD1 (ENSNVIG00000003432) #23 ENSNVIG00000003418 F5H619 (ENSNVIG00000003257) #24 DTD2 (ENSNVIG00000003240) #25 GPR33 (ENSNVIG00000003227) #26 NUBPL (ENSNVIG00000003207) #27 ARHGAP5 (ENSNVIG00000003107) #28 AKAP6 (ENSNVIG00000003054) #29 NPAS3 (ENSNVIG00000002999) #30 EGLN3 (ENSNVIG00000002975) #31 ENSNVIG00000002935 SPTSSA (ENSNVIG00000002933) #32 EAPP (ENSNVIG00000002902) #33 SNX6 (ENSNVIG00000002824) #34 CFL2 (ENSNVIG00000002744) #35 Ferret MODERN SPECIES 210 CMA1 (ENSMPUG00000005588) CTSG (ENSMPUG00000005559) GZMH (ENSMPUG00000005487) GZMB (ENSMPUG00000005479) ENSMPUG00000005470 #13 NOVA1 (ENSMPUG00000005462) #14 ENSMPUG00000005454 ENSMPUG00000018867 ENSMPUG00000018865 FOXG1 (ENSMPUG00000005425) #16 PRKD1 (ENSMPUG00000005409) #17 G2E3 (ENSMPUG00000005396) #18 SCFD1 (ENSMPUG00000005374) #19 COCH (ENSMPUG00000005358) #20 STRN3 (ENSMPUG00000005340) #21 AP4S1 (ENSMPUG00000005330) #22 HECTD1 (ENSMPUG00000005315) #23 Canidae DUPLICATION Canidae ANCESTRAL SPECIES ENSGT00970000193421.B.g #22 Canis_lupus ANCESTRAL SPECIES ENSGT00970000193421.B.g #22 Dog MODERN SPECIES 31 ENSCAFG00845027160 UHMK1 (ENSCAFG00845027027) UAP1 (ENSCAFG00845026767) DDR2 (ENSCAFG00845026475) HSD17B7 (ENSCAFG00845026233) CCDC190 (ENSCAFG00845026143) RGS4 (ENSCAFG00845026010) RGS5 (ENSCAFG00845025929) NUF2 (ENSCAFG00845025722) PBX1 (ENSCAFG00845025355) LMX1A (ENSCAFG00845025098) RXRG (ENSCAFG00845024833) LRRC52 (ENSCAFG00845024741) MGST3 (ENSCAFG00845024662) ENSCAFG00845024594 ENSCAFG00845024557 #22 TMCO1 (ENSCAFG00845024491) UCK2 (ENSCAFG00845024343) FAM78B (ENSCAFG00845024241) ENSCAFG00845030595 ENSCAFG00845030578 BROX (ENSCAFG00845030521) AIDA (ENSCAFG00845030498) MIA3 (ENSCAFG00845030361) TAF1A (ENSCAFG00845030298) HHIPL2 (ENSCAFG00845030272) DUSP10 (ENSCAFG00845030259) ENSCAFG00845030246 HLX (ENSCAFG00845030227) MTARC1 (ENSCAFG00845030177) ENSCAFG00845030148 Canidae DUPLICATION Canidae ANCESTRAL SPECIES 4 ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00510000046986.v.a.a.b.a.b.b.a ENSGT00940000166484 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.h.a #22 ENSGT00940000165919 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.w #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Canis_lupus ANCESTRAL SPECIES 8 ENSGT00940000156499 #13 ENSGT01050000248456 ENSGT00940000155573 #14 ENSGT00950000183206.b.c.b.o.a ENSGT00390000005569.x.a.b.b.a.a ENSGT00940000155120.lb.a.b.b ENSGT00940000160678.a #16 ENSGT00510000046986.v.a.a.b.a.b.b.a ENSGT00940000166484 ENSGT00950000183024.a.b.a #17 ENSGT00950000183030.m.a.b.b.d.b.b ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B.h.a #22 ENSGT00940000165919 ENSGT00940000156572 #23 ENSGT00390000008918.a.a ENSGT00390000006205.b #24 ENSGT00940000153431.a.o #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.w #33 ENSGT00940000154940 #34 Dingo MODERN SPECIES 161 ENSCAFG00020024149 #14 ENSCAFG00020024148 ENSCAFG00020024147 ENSCAFG00020024144 FOXG1 (ENSCAFG00020024141) #16 ENSCAFG00020024139 NACA2 (ENSCAFG00020024135) PRKD1 (ENSCAFG00020024128) #17 ENSCAFG00020024124 ENSCAFG00020024122 #18 ENSCAFG00020024119 #18 SCFD1 (ENSCAFG00020024112) #19 COCH (ENSCAFG00020024104) #20 STRN3 (ENSCAFG00020024096) #21 ENSCAFG00020024090 AP4S1 (ENSCAFG00020024081) #22 HECTD1 (ENSCAFG00020023723) #23 ENSCAFG00020023694 HEATR5A (ENSCAFG00020023674) #24 ENSCAFG00020023663 #25 GPR33 (ENSCAFG00020023662) #26 ENSCAFG00020023659 ENSCAFG00020023655 #27 ENSCAFG00020023650 ENSCAFG00020023647 ARHGAP5 (ENSCAFG00020023643) #28 AKAP6 (ENSCAFG00020023612) #29 NPAS3 (ENSCAFG00020023578) #30 EGLN3 (ENSCAFG00020023576) #31 SPTSSA (ENSCAFG00020023575) #32 EAPP (ENSCAFG00020023572) #33 Dog MODERN SPECIES 36 ENSCAFG00845008954 NOVA1 (ENSCAFG00845008983) #14 ENSCAFG00845009061 ENSCAFG00845009104 ENSCAFG00845009134 ENSCAFG00845009198 #16 ENSCAFG00845009282 ENSCAFG00845009362 ENSCAFG00845009533 #17 ENSCAFG00845009959 SCFD1 (ENSCAFG00845010038) #18 ENSCAFG00845010191 SCFD1 (ENSCAFG00845010280) #19 COCH (ENSCAFG00845010721) #20 STRN3 (ENSCAFG00845010851) #21 AP4S1 (ENSCAFG00845010937) #22 ENSCAFG00845011023 HECTD1 (ENSCAFG00845011087) #23 HEATR5A (ENSCAFG00845011579) #24 ENSCAFG00845011772 DTD2 (ENSCAFG00845011795) #25 GPR33 (ENSCAFG00845011804) #26 NUBPL (ENSCAFG00845011856) #27 ARHGAP5 (ENSCAFG00845012045) #28 AKAP6 (ENSCAFG00845012171) #29 NPAS3 (ENSCAFG00845012355) #30 EGLN3 (ENSCAFG00845012583) #31 ENSCAFG00845001464 ENSCAFG00845001492 #32 EAPP (ENSCAFG00845001503) #33 ENSCAFG00845001517 #34 Red fox MODERN SPECIES 65 ENSVVUG00000029221 GZMB (ENSVVUG00000029236) STXBP6 (ENSVVUG00000029357) #13 NOVA1 (ENSVVUG00000029367) #14 ENSVVUG00000029372 ENSVVUG00000029376 ENSVVUG00000029378 #16 ENSVVUG00000029380 ENSVVUG00000029381 ENSVVUG00000029384 PRKD1 (ENSVVUG00000029386) #17 G2E3 (ENSVVUG00000029399) #18 SCFD1 (ENSVVUG00000029414) #19 COCH (ENSVVUG00000029419) #20 STRN3 (ENSVVUG00000029456) #21 ENSVVUG00000029587 #22 ENSVVUG00000029588 HECTD1 (ENSVVUG00000029612) #23 HEATR5A (ENSVVUG00000029806) #24 DTD2 (ENSVVUG00000029907) #25 GPR33 (ENSVVUG00000029908) #26 ENSVVUG00000029909 NUBPL (ENSVVUG00000029910) #27 ENSVVUG00000029921 ARHGAP5 (ENSVVUG00000029922) #28 ENSVVUG00000029926 AKAP6 (ENSVVUG00000029932) #29 NPAS3 (ENSVVUG00000029947) #30 ENSVVUG00000029949 #31 ENSVVUG00000029955 #33 Canidae ANCESTRAL SPECIES ENSGT00970000193421.B.h.b #22 Red fox MODERN SPECIES 8 ENSVVUG00000009977 UHMK1 (ENSVVUG00000009990) UAP1 (ENSVVUG00000010001) DDR2 (ENSVVUG00000010010) HSD17B7 (ENSVVUG00000010017) CCDC190 (ENSVVUG00000010024) RGS4 (ENSVVUG00000010037) RGS5 (ENSVVUG00000010040) NUF2 (ENSVVUG00000010059) PBX1 (ENSVVUG00000010091) LMX1A (ENSVVUG00000010113) RXRG (ENSVVUG00000010121) LRRC52 (ENSVVUG00000010146) MGST3 (ENSVVUG00000010150) ENSVVUG00000010155 ENSVVUG00000010169 #22 UCK2 (ENSVVUG00000010176) FAM78B (ENSVVUG00000010186) ENSVVUG00000010193 FAM177B (ENSVVUG00000010199) BROX (ENSVVUG00000010206) AIDA (ENSVVUG00000010215) MIA3 (ENSVVUG00000010238) TAF1A (ENSVVUG00000010281) HHIPL2 (ENSVVUG00000010307) ENSVVUG00000010329 ENSVVUG00000010341 DUSP10 (ENSVVUG00000010349) HLX (ENSVVUG00000010359) ENSVVUG00000010364 ENSVVUG00000010371 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Chiroptera ANCESTRAL SPECIES 34 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000160678.a #16 ENSGT00390000007452 ENSGT00940000155573 #14 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Megabat MODERN SPECIES 3690 COCH (ENSPVAG00000017157) #20 STRN3 (ENSPVAG00000017159) #21 AP4S1 (ENSPVAG00000017161) #22 HECTD1 (ENSPVAG00000017163) #23 HEATR5A (ENSPVAG00000017172) #24 DTD2 (ENSPVAG00000017175) #25 NUBPL (ENSPVAG00000017177) #27 Microchiroptera ANCESTRAL SPECIES 29 ENSGT00940000161993 ENSGT00390000000337 ENSGT01030000234551.k.d.b.b.c.a ENSGT01030000234551.k.d.b.b.c.b ENSGT01030000234551.k.d.b.a.a.b ENSGT01030000234551.k.d.b.a.a.a.a ENSGT01030000234551.k.d.b.a.a.a.b.b.b ENSGT00940000156499 #13 ENSGT00940000160678.a #16 ENSGT00940000155573 #14 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Microbat MODERN SPECIES 959 UBFD1 (ENSMLUG00000012134) EARS2 (ENSMLUG00000012120) GGA2 (ENSMLUG00000012106) COG7 (ENSMLUG00000012090) SCNN1B (ENSMLUG00000012080) SCNN1G (ENSMLUG00000006676) USP31 (ENSMLUG00000005833) ENSMLUG00000028345 #16 ENSMLUG00000028038 PRKD1 (ENSMLUG00000010770) #17 ENSMLUG00000027139 G2E3 (ENSMLUG00000000531) #18 SCFD1 (ENSMLUG00000000542) #19 COCH (ENSMLUG00000011622) #20 STRN3 (ENSMLUG00000011642) #21 AP4S1 (ENSMLUG00000011671) #22 HECTD1 (ENSMLUG00000013003) #23 HEATR5A (ENSMLUG00000005763) #24 DTD2 (ENSMLUG00000005789) #25 NUBPL (ENSMLUG00000004368) #27 ARHGAP5 (ENSMLUG00000026153) #28 AKAP6 (ENSMLUG00000007138) #29 NPAS3 (ENSMLUG00000016973) #30 EGLN3 (ENSMLUG00000014716) #31 SPTSSA (ENSMLUG00000013821) #32 EAPP (ENSMLUG00000013814) #33 ENSMLUG00000030716 SNX6 (ENSMLUG00000007049) #34 BAZ1A (ENSMLUG00000006672) #36 ENSMLUG00000023750 SRP54 (ENSMLUG00000008958) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 24 CMA1 (ENSRFEG00010000956) ENSRFEG00010000974 ENSRFEG00010000989 ENSRFEG00010000996 ENSRFEG00010001016 STXBP6 (ENSRFEG00010001035) #13 ENSRFEG00010001065 NOVA1 (ENSRFEG00010001123) #14 ENSRFEG00010001154 PRKD1 (ENSRFEG00010001259) #17 G2E3 (ENSRFEG00010001340) #18 SCFD1 (ENSRFEG00010001418) #19 ENSRFEG00010001476 COCH (ENSRFEG00010001503) #20 STRN3 (ENSRFEG00010001558) #21 AP4S1 (ENSRFEG00010001649) #22 HECTD1 (ENSRFEG00010001711) #23 HEATR5A (ENSRFEG00010001860) #24 DTD2 (ENSRFEG00010002009) #25 GPR33 (ENSRFEG00010002026) #26 NUBPL (ENSRFEG00010002035) #27 ARHGAP5 (ENSRFEG00010002064) #28 ENSRFEG00010002109 AKAP6 (ENSRFEG00010002160) #29 NPAS3 (ENSRFEG00010002279) #30 EGLN3 (ENSRFEG00010002399) #31 SPTSSA (ENSRFEG00010002421) #32 EAPP (ENSRFEG00010002434) #33 SNX6 (ENSRFEG00010002499) #34 ENSRFEG00010002540 CFL2 (ENSRFEG00010002557) #35 Greater horseshoe bat MODERN SPECIES 1 ENSRFEG00010020251 DDX11 (ENSRFEG00010020210) FKBP4 (ENSRFEG00010020174) ITFG2 (ENSRFEG00010020149) NRIP2 (ENSRFEG00010020137) TEX52 (ENSRFEG00010020115) FOXM1 (ENSRFEG00010020006) RHNO1 (ENSRFEG00010019970) TULP3 (ENSRFEG00010019949) TEAD4 (ENSRFEG00010019884) TSPAN9 (ENSRFEG00010019826) TSPAN11 (ENSRFEG00010019754) PRMT8 (ENSRFEG00010019627) CRACR2A (ENSRFEG00010019586) PARP11 (ENSRFEG00010019492) ENSRFEG00010019453 #22 ENSRFEG00010019429 CCND2 (ENSRFEG00010019410) TIGAR (ENSRFEG00010019362) FGF23 (ENSRFEG00010019321) FGF6 (ENSRFEG00010019293) C12orf4 (ENSRFEG00010019269) RAD51AP1 (ENSRFEG00010019230) DYRK4 (ENSRFEG00010019022) AKAP3 (ENSRFEG00010018980) NDUFA9 (ENSRFEG00010018944) GALNT8 (ENSRFEG00010018902) TMCC3 (ENSRFEG00010018851) CEP83 (ENSRFEG00010018746) PLXNC1 (ENSRFEG00010018545) ENSRFEG00010018443 Equus ANCESTRAL SPECIES 54 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00950000183087.A.a.b.b ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00440000034918.q.b.b ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Donkey MODERN SPECIES 11 ENSEASG00005018535 ENSEASG00005026647 ENSEASG00005030376 ENSEASG00005018648 #13 ENSEASG00005025548 #14 ENSEASG00005030567 #14 ENSEASG00005018651 ENSEASG00005018652 ENSEASG00005018653 #16 PRKD1 (ENSEASG00005000023) #17 ENSEASG00005000061 G2E3 (ENSEASG00005000139) #18 SCFD1 (ENSEASG00005000580) #19 COCH (ENSEASG00005000969) #20 STRN3 (ENSEASG00005001153) #21 AP4S1 (ENSEASG00005034840) #22 HECTD1 (ENSEASG00005002686) #23 ENSEASG00005003251 HEATR5A (ENSEASG00005003563) #24 DTD2 (ENSEASG00005028650) #25 GPR33 (ENSEASG00005005695) #26 NUBPL (ENSEASG00005005696) #27 ARHGAP5 (ENSEASG00005005703) #28 AKAP6 (ENSEASG00005005719) #29 NPAS3 (ENSEASG00005005778) #30 EGLN3 (ENSEASG00005028459) #31 SPTSSA (ENSEASG00005026736) #32 EAPP (ENSEASG00005026397) #33 ENSEASG00005009746 #34 ENSEASG00005034847 #34 CFL2 (ENSEASG00005001781) #35 Horse MODERN SPECIES ENSECAG00000008322 ENSECAG00000060000 ENSECAG00000059009 ENSECAG00000052415 ENSECAG00000041707 ENSECAG00000054592 STXBP6 (ENSECAG00000016835) #13 NOVA1 (ENSECAG00000037301) #14 ENSECAG00000050239 FOXG1 (ENSECAG00000030913) #16 PRKD1 (ENSECAG00000005719) #17 G2E3 (ENSECAG00000020895) #18 SCFD1 (ENSECAG00000002972) #19 COCH (ENSECAG00000021944) #20 STRN3 (ENSECAG00000010464) #21 AP4S1 (ENSECAG00000021753) #22 HECTD1 (ENSECAG00000023505) #23 ENSECAG00000031422 HEATR5A (ENSECAG00000015912) #24 DTD2 (ENSECAG00000016348) #25 GPR33 (ENSECAG00000039612) #26 NUBPL (ENSECAG00000016526) #27 ENSECAG00000058754 ENSECAG00000033699 ARHGAP5 (ENSECAG00000017271) #28 ENSECAG00000046933 ENSECAG00000048271 AKAP6 (ENSECAG00000019940) #29 ENSECAG00000044670 NPAS3 (ENSECAG00000021888) #30 EGLN3 (ENSECAG00000005086) #31 Eulipotyphla ANCESTRAL SPECIES 276 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 Hedgehog MODERN SPECIES 15598 AP4S1 (ENSEEUG00000013009) #22 Common shrew MODERN SPECIES 100 ENSSARG00000010064 #20 STRN3 (ENSSARG00000010097) #21 AP4S1 (ENSSARG00000010130) #22 ENSSARG00000010158 #23 Atlantogenata ANCESTRAL SPECIES 8 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Afrotheria ANCESTRAL SPECIES 6 ENSGT01030000234551.k.d.b.a.a.a.b.a.s ENSGT01030000234551.k.d.b.a.a.a.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Tenrec MODERN SPECIES 8059 STRN3 (ENSETEG00000003611) #21 ENSETEG00000003619 #22 Afrotheria_a ANCESTRAL SPECIES 6 ENSGT01030000234551.k.d.b.a.a.a.b.a.s ENSGT01030000234551.k.d.b.a.a.a.a ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Elephant MODERN SPECIES 602 ENSLAFG00000028351 ENSLAFG00000027613 STXBP6 (ENSLAFG00000010204) #13 NOVA1 (ENSLAFG00000006455) #14 ENSLAFG00000000378 #16 PRKD1 (ENSLAFG00000015456) #17 G2E3 (ENSLAFG00000005684) #18 SCFD1 (ENSLAFG00000006117) #19 COCH (ENSLAFG00000012342) #20 STRN3 (ENSLAFG00000012349) #21 AP4S1 (ENSLAFG00000005485) #22 HECTD1 (ENSLAFG00000005491) #23 HEATR5A (ENSLAFG00000001023) #24 DTD2 (ENSLAFG00000018559) #25 GPR33 (ENSLAFG00000031980) #26 NUBPL (ENSLAFG00000004185) #27 ARHGAP5 (ENSLAFG00000012386) #28 AKAP6 (ENSLAFG00000000717) #29 NPAS3 (ENSLAFG00000007169) #30 EGLN3 (ENSLAFG00000007342) #31 SPTSSA (ENSLAFG00000030948) #32 EAPP (ENSLAFG00000010570) #33 SNX6 (ENSLAFG00000010573) #34 CFL2 (ENSLAFG00000010579) #35 BAZ1A (ENSLAFG00000010581) #36 ENSLAFG00000025618 Hyrax MODERN SPECIES 6799 STRN3 (ENSPCAG00000008359) #21 AP4S1 (ENSPCAG00000008456) #22 HECTD1 (ENSPCAG00000008519) #23 Xenarthra ANCESTRAL SPECIES ENSGT00970000193421.B #22 Armadillo MODERN SPECIES 2364 ENSDNOG00000036802 TMPRSS11F (ENSDNOG00000017203) ENSDNOG00000046486 TMPRSS11A (ENSDNOG00000024478) TMPRSS11D (ENSDNOG00000016095) ENSDNOG00000045741 GNRHR (ENSDNOG00000016451) UBA6 (ENSDNOG00000008434) STAP1 (ENSDNOG00000048912) CENPC (ENSDNOG00000002935) ENSDNOG00000044365 #22 ENSDNOG00000042413 ENSDNOG00000001439 ENSDNOG00000040187 Sloth MODERN SPECIES 286 AP4S1 (ENSCHOG00000013301) #22 Marsupialia ANCESTRAL SPECIES ENSGT00390000005052 ENSGT00390000001830.i.a ENSGT00710000106769 ENSGT00940000158774 ENSGT00390000009196 ENSGT00390000008198 ENSGT01030000234551.k.d.b.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000019406 ENSGT00510000047812 ENSGT00940000157545 ENSGT00390000009277 ENSGT00940000160700 ENSGT00390000011613 Opossum MODERN SPECIES ENSMODG00000038001 NOVA1 (ENSMODG00000049692) #14 ENSMODG00000048709 FOXG1 (ENSMODG00000017542) #16 ENSMODG00000043570 ENSMODG00000045515 ENSMODG00000029330 PRKD1 (ENSMODG00000017552) #17 ENSMODG00000028551 G2E3 (ENSMODG00000017557) #18 SCFD1 (ENSMODG00000017563) #19 COCH (ENSMODG00000017567) #20 ENSMODG00000017575 STRN3 (ENSMODG00000017571) #21 ENSMODG00000048426 AP4S1 (ENSMODG00000017579) #22 HECTD1 (ENSMODG00000017590) #23 HEATR5A (ENSMODG00000017600) #24 DTD2 (ENSMODG00000045920) #25 GPR33 (ENSMODG00000050260) #26 ENSMODG00000024099 NUBPL (ENSMODG00000024100) #27 ARHGAP5 (ENSMODG00000017613) #28 AKAP6 (ENSMODG00000017618) #29 NPAS3 (ENSMODG00000017620) #30 ENSMODG00000042896 EGLN3 (ENSMODG00000017625) #31 SQOR (ENSMODG00000017627) BLOC1S6 (ENSMODG00000017628) SLC30A4 (ENSMODG00000017630) ENSMODG00000042102 Marsupialia_b ANCESTRAL SPECIES ENSGT00910000144260 ENSGT00390000005052 ENSGT00390000001830.i.a ENSGT00710000106769 ENSGT00940000158774 ENSGT00390000009196 ENSGT00390000008198 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000182945.b.b.e.b ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000019406 ENSGT00510000047812 ENSGT00940000157545 ENSGT00390000009277 ENSGT00940000160700 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000003512 ENSSHAG00000003236 ENSSHAG00000029021 ENSSHAG00000004157 ENSSHAG00000002433 ENSSHAG00000030234 ENSSHAG00000005592 #13 NOVA1 (ENSSHAG00000031756) #14 FOXG1 (ENSSHAG00000021849) #16 PRKD1 (ENSSHAG00000024235) #17 G2E3 (ENSSHAG00000031633) #18 SCFD1 (ENSSHAG00000014800) #19 ENSSHAG00000026243 COCH (ENSSHAG00000014060) #20 STRN3 (ENSSHAG00000013827) #21 AP4S1 (ENSSHAG00000013484) #22 HECTD1 (ENSSHAG00000013045) #23 HEATR5A (ENSSHAG00000011970) #24 DTD2 (ENSSHAG00000024859) #25 GPR33 (ENSSHAG00000011325) #26 ENSSHAG00000028480 NUBPL (ENSSHAG00000008500) #27 ARHGAP5 (ENSSHAG00000001822) #28 AKAP6 (ENSSHAG00000013667) #29 NPAS3 (ENSSHAG00000025296) #30 ENSSHAG00000012920 #31 ENSSHAG00000008981 SLC30A4 (ENSSHAG00000025011) C15orf48 (ENSSHAG00000006212) SPATA5L1 (ENSSHAG00000005783) GATM (ENSSHAG00000004129) Diprotodontia ANCESTRAL SPECIES ENSGT00910000144260 ENSGT00390000005052 ENSGT00390000001830.i.a ENSGT00710000106769 ENSGT00940000158774 ENSGT00390000009196 ENSGT00390000008198 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000182945.b.b.e.b ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000019406 ENSGT00510000047812 ENSGT00940000157545 ENSGT00390000009277 ENSGT00940000160700 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00910000144260 ENSGT00390000005052 ENSGT00390000001830.i.a ENSGT00710000106769 ENSGT00940000158774 ENSGT00390000009196 ENSGT00390000008198 ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT01020000230438.B.b.b.a #26 ENSGT00950000182945.b.b.e.b ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000019406 ENSGT00510000047812 ENSGT00940000157545 ENSGT00390000009277.bb ENSGT00940000160700 koala MODERN SPECIES 101 TRIP11 (ENSPCIG00000011383) FBLN5 (ENSPCIG00000011365) TC2N (ENSPCIG00000011360) ENSPCIG00000011356 ENSPCIG00000011351 STXBP6 (ENSPCIG00000011348) #13 NOVA1 (ENSPCIG00000024683) #14 ENSPCIG00000016114 ENSPCIG00000035834 #16 ENSPCIG00000035249 PRKD1 (ENSPCIG00000024460) #17 G2E3 (ENSPCIG00000025422) #18 SCFD1 (ENSPCIG00000025457) #19 COCH (ENSPCIG00000023777) #20 STRN3 (ENSPCIG00000023770) #21 AP4S1 (ENSPCIG00000035487) #22 ENSPCIG00000023758 HECTD1 (ENSPCIG00000023741) #23 HEATR5A (ENSPCIG00000023713) #24 DTD2 (ENSPCIG00000023706) #25 GPR33 (ENSPCIG00000023701) #26 ENSPCIG00000024335 NUBPL (ENSPCIG00000024329) #27 ARHGAP5 (ENSPCIG00000024338) #28 ENSPCIG00000018432 #29 Common wonbat MODERN SPECIES 1031 ATXN3 (ENSVURG00010000231) TRIP11 (ENSVURG00010000541) ENSVURG00010000613 TC2N (ENSVURG00010000637) ENSVURG00010000663 ENSVURG00010000690 ENSVURG00010000770 NOVA1 (ENSVURG00010000843) #14 ENSVURG00010000899 PRKD1 (ENSVURG00010000998) #17 G2E3 (ENSVURG00010001188) #18 ENSVURG00010001211 SCFD1 (ENSVURG00010001249) #19 COCH (ENSVURG00010001363) #20 STRN3 (ENSVURG00010001455) #21 AP4S1 (ENSVURG00010001627) #22 HECTD1 (ENSVURG00010001700) #23 HEATR5A (ENSVURG00010001756) #24 DTD2 (ENSVURG00010001842) #25 GPR33 (ENSVURG00010001847) #26 NUBPL (ENSVURG00010001936) #27 ENSVURG00010002007 ARHGAP5 (ENSVURG00010002087) #28 AKAP6 (ENSVURG00010002193) #29 NPAS3 (ENSVURG00010002315) #30 EGLN3 (ENSVURG00010002628) #31 ENSVURG00010002650 SQOR (ENSVURG00010002691) BLOC1S6 (ENSVURG00010002717) SLC30A4 (ENSVURG00010002727) ENSVURG00010002749 Platypus MODERN SPECIES 5 FBXO33 (ENSOANG00000049571) ENSOANG00000014010 ENSOANG00000039934 PNN (ENSOANG00000046087) TRAPPC6B (ENSOANG00000043135) GEMIN2 (ENSOANG00000014013) SEC23A (ENSOANG00000014007) STXBP6 (ENSOANG00000014014) #13 NOVA1 (ENSOANG00000014015) #14 FOXG1 (ENSOANG00000014017) #16 PRKD1 (ENSOANG00000014018) #17 G2E3 (ENSOANG00000014019) #18 SCFD1 (ENSOANG00000014020) #19 COCH (ENSOANG00000014025) #20 STRN3 (ENSOANG00000014029) #21 AP4S1 (ENSOANG00000039192) #22 HECTD1 (ENSOANG00000014033) #23 HEATR5A (ENSOANG00000014036) #24 DTD2 (ENSOANG00000014038) #25 NUBPL (ENSOANG00000014034) #27 ARHGAP5 (ENSOANG00000014039) #28 AKAP6 (ENSOANG00000014040) #29 NPAS3 (ENSOANG00000014044) #30 ENSOANG00000049968 EGLN3 (ENSOANG00000037294) #31 SPTSSA (ENSOANG00000043145) #32 EAPP (ENSOANG00000049496) #33 SNX6 (ENSOANG00000042198) #34 BAZ1A (ENSOANG00000014049) #36 ENSOANG00000014050 SRP54 (ENSOANG00000041370) Sauria ANCESTRAL SPECIES 3 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Lepidosauria ANCESTRAL SPECIES 24 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 tuatara MODERN SPECIES 500 G2E3 (ENSSPUG00000008536) #18 SCFD1 (ENSSPUG00000008515) #19 COCH (ENSSPUG00000008496) #20 STRN3 (ENSSPUG00000008477) #21 AP4S1 (ENSSPUG00000008466) #22 HECTD1 (ENSSPUG00000008399) #23 Episquamata ANCESTRAL SPECIES ENSGT00940000159180 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT01100000263530.b ENSGT01100000263530.a ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Laterata ANCESTRAL SPECIES 2 ENSGT00940000159180 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT01100000263530.b ENSGT01100000263530.a ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Common wall lizard MODERN SPECIES ACTC1 (ENSPMRG00000008444) ENSPMRG00000008441 ENSPMRG00000008440 STXBP6 (ENSPMRG00000008434) #13 ENSPMRG00000008423 ENSPMRG00000008417 NOVA1 (ENSPMRG00000008406) #14 ENSPMRG00000008394 ENSPMRG00000008392 FOXG1 (ENSPMRG00000008381) #16 PRKD1 (ENSPMRG00000007587) #17 G2E3 (ENSPMRG00000007283) #18 SCFD1 (ENSPMRG00000007064) #19 COCH (ENSPMRG00000006936) #20 STRN3 (ENSPMRG00000006295) #21 AP4S1 (ENSPMRG00000006218) #22 ENSPMRG00000006213 HECTD1 (ENSPMRG00000005579) #23 HEATR5A (ENSPMRG00000004459) #24 DTD2 (ENSPMRG00000004359) #25 NUBPL (ENSPMRG00000004333) #27 ENSPMRG00000004327 #28 ENSPMRG00000004319 #28 AKAP6 (ENSPMRG00000004291) #29 ENSPMRG00000004283 ENSPMRG00000004277 ENSPMRG00000004271 ENSPMRG00000004269 NPAS3 (ENSPMRG00000004200) #30 ENSPMRG00000004181 EGLN3 (ENSPMRG00000004171) #31 Argentine black and white tegu MODERN SPECIES 14 AQR (ENSSMRG00000014721) ENSSMRG00000014720 ENSSMRG00000014719 ENSSMRG00000014716 STXBP6 (ENSSMRG00000014714) #13 ENSSMRG00000014713 NOVA1 (ENSSMRG00000014710) #14 ENSSMRG00000014709 ENSSMRG00000014708 FOXG1 (ENSSMRG00000014705) #16 PRKD1 (ENSSMRG00000014697) #17 G2E3 (ENSSMRG00000014687) #18 SCFD1 (ENSSMRG00000014682) #19 COCH (ENSSMRG00000014678) #20 STRN3 (ENSSMRG00000014675) #21 AP4S1 (ENSSMRG00000014674) #22 HECTD1 (ENSSMRG00000012971) #23 HEATR5A (ENSSMRG00000012967) #24 ENSSMRG00000012966 #25 NUBPL (ENSSMRG00000012965) #27 ARHGAP5 (ENSSMRG00000012963) #28 AKAP6 (ENSSMRG00000012959) #29 ENSSMRG00000012958 NPAS3 (ENSSMRG00000012956) #30 EGLN3 (ENSSMRG00000012949) #31 SPTSSA (ENSSMRG00000012947) #32 CFL2 (ENSSMRG00000012946) #35 SNX6 (ENSSMRG00000012944) #34 EAPP (ENSSMRG00000012943) #33 BAZ1A (ENSSMRG00000012801) #36 ENSSMRG00000012800 Toxicofera ANCESTRAL SPECIES 5 ENSGT00940000159180 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.r.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000162286.a.a ENSGT01100000263481 ENSGT01100000263530.b ENSGT01100000263530.a ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 Lizard MODERN SPECIES 1 ENSACAG00000039290 ENSACAG00000017412 SLC46A2 (ENSACAG00000017402) SNX30 (ENSACAG00000017384) ENSACAG00000034721 INIP (ENSACAG00000034986) KIAA1958 (ENSACAG00000017372) HSDL2 (ENSACAG00000017353) PTBP3 (ENSACAG00000017316) SUSD1 (ENSACAG00000022560) UGCG (ENSACAG00000017299) ENSACAG00000014828 #19 COCH (ENSACAG00000014832) #20 ENSACAG00000034657 STRN3 (ENSACAG00000014886) #21 AP4S1 (ENSACAG00000015092) #22 HECTD1 (ENSACAG00000015118) #23 HEATR5A (ENSACAG00000015177) #24 DTD2 (ENSACAG00000015281) #25 NUBPL (ENSACAG00000015286) #27 ENSACAG00000029681 ARHGAP5 (ENSACAG00000002726) #28 ENSACAG00000044565 AKAP6 (ENSACAG00000002643) #29 ENSACAG00000036757 NPAS3 (ENSACAG00000002620) #30 EGLN3 (ENSACAG00000040138) #31 SPTSSA (ENSACAG00000044505) #32 EAPP (ENSACAG00000040323) #33 SNX6 (ENSACAG00000002409) #34 CFL2 (ENSACAG00000002385) #35 Elapidae ANCESTRAL SPECIES 3 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.r.a #14 ENSGT00940000173025 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a.g #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b.m #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Indian cobra MODERN SPECIES DPH6 (ENSNNAG00000009840) AQR (ENSNNAG00000009928) ACTC1 (ENSNNAG00000010057) ENSNNAG00000010139 STXBP6 (ENSNNAG00000010185) #13 ENSNNAG00000010219 NOVA1 (ENSNNAG00000010237) #14 ENSNNAG00000010297 FOXG1 (ENSNNAG00000010333) #16 PRKD1 (ENSNNAG00000010348) #17 G2E3 (ENSNNAG00000010420) #18 SCFD1 (ENSNNAG00000010584) #19 COCH (ENSNNAG00000011926) #20 ENSNNAG00000012061 #21 ENSNNAG00000012651 #21 AP4S1 (ENSNNAG00000013772) #22 HECTD1 (ENSNNAG00000013803) #23 HEATR5A (ENSNNAG00000013880) #24 DTD2 (ENSNNAG00000013978) #25 NUBPL (ENSNNAG00000006706) #27 ARHGAP5 (ENSNNAG00000006737) #28 AKAP6 (ENSNNAG00000006787) #29 NPAS3 (ENSNNAG00000006932) #30 ENSNNAG00000007211 SPTSSA (ENSNNAG00000007223) #32 EAPP (ENSNNAG00000007231) #33 SNX6 (ENSNNAG00000007261) #34 CFL2 (ENSNNAG00000007288) #35 BAZ1A (ENSNNAG00000007312) #36 ENSNNAG00000007422 SRP54 (ENSNNAG00000007461) Elapidae_a ANCESTRAL SPECIES 4 ENSGT00390000018465 ENSGT00420000029820 ENSGT00990000214196 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.r.a #14 ENSGT00940000173025 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a.g #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b.m #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Blue-lipped sea krait MODERN SPECIES 6949 AMD1 (ENSLLTG00000012915) GTF3C6 (ENSLLTG00000012921) ENSLLTG00000012931 #21 AP4S1 (ENSLLTG00000012946) #22 Acanthophiinae ANCESTRAL SPECIES 6 ENSGT00390000018465 ENSGT00420000029820 ENSGT00990000214196 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.r.a #14 ENSGT00940000173025 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a.g #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b.m #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Mainland tiger snake MODERN SPECIES 8 ENSNSUG00000006077 DPH6 (ENSNSUG00000006076) ENSNSUG00000006075 AQR (ENSNSUG00000005708) ACTC1 (ENSNSUG00000005705) ENSNSUG00000005703 STXBP6 (ENSNSUG00000005702) #13 NOVA1 (ENSNSUG00000005700) #14 FOXG1 (ENSNSUG00000005697) #16 PRKD1 (ENSNSUG00000005692) #17 G2E3 (ENSNSUG00000005637) #18 SCFD1 (ENSNSUG00000004783) #19 COCH (ENSNSUG00000004777) #20 ENSNSUG00000004776 #21 ENSNSUG00000004774 #21 AP4S1 (ENSNSUG00000004769) #22 HECTD1 (ENSNSUG00000003900) #23 HEATR5A (ENSNSUG00000003845) #24 DTD2 (ENSNSUG00000003844) #25 ENSNSUG00000003841 NUBPL (ENSNSUG00000003840) #27 ARHGAP5 (ENSNSUG00000003836) #28 AKAP6 (ENSNSUG00000003783) #29 NPAS3 (ENSNSUG00000003732) #30 EGLN3 (ENSNSUG00000003728) #31 SPTSSA (ENSNSUG00000003726) #32 EAPP (ENSNSUG00000003724) #33 SNX6 (ENSNSUG00000003722) #34 CFL2 (ENSNSUG00000003720) #35 BAZ1A (ENSNSUG00000003669) #36 ENSNSUG00000003653 Eastern brown snake MODERN SPECIES 1 DPH6 (ENSPTXG00000002805) ENSPTXG00000002806 AQR (ENSPTXG00000002808) ACTC1 (ENSPTXG00000002809) ENSPTXG00000002811 STXBP6 (ENSPTXG00000002812) #13 ENSPTXG00000002813 #14 ENSPTXG00000002814 #14 ENSPTXG00000002817 FOXG1 (ENSPTXG00000002818) #16 PRKD1 (ENSPTXG00000002821) #17 G2E3 (ENSPTXG00000002827) #18 SCFD1 (ENSPTXG00000003002) #19 COCH (ENSPTXG00000003006) #20 STRN3 (ENSPTXG00000003009) #21 AP4S1 (ENSPTXG00000003015) #22 HECTD1 (ENSPTXG00000003020) #23 HEATR5A (ENSPTXG00000003041) #24 DTD2 (ENSPTXG00000003115) #25 ENSPTXG00000003117 NUBPL (ENSPTXG00000003118) #27 ARHGAP5 (ENSPTXG00000003120) #28 AKAP6 (ENSPTXG00000003121) #29 NPAS3 (ENSPTXG00000003122) #30 EGLN3 (ENSPTXG00000003125) #31 SPTSSA (ENSPTXG00000003126) #32 EAPP (ENSPTXG00000003127) #33 SNX6 (ENSPTXG00000003129) #34 CFL2 (ENSPTXG00000003130) #35 BAZ1A (ENSPTXG00000003134) #36 ENSPTXG00000003164 Archelosauria ANCESTRAL SPECIES 2 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Archosauria ANCESTRAL SPECIES 5 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Aves ANCESTRAL SPECIES 2 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 African ostrich MODERN SPECIES 438 FOXG1 (ENSSCUG00000010141) #16 PRKD1 (ENSSCUG00000010145) #17 G2E3 (ENSSCUG00000010146) #18 SCFD1 (ENSSCUG00000010147) #19 COCH (ENSSCUG00000010148) #20 STRN3 (ENSSCUG00000010158) #21 AP4S1 (ENSSCUG00000010186) #22 HECTD1 (ENSSCUG00000010193) #23 HEATR5A (ENSSCUG00000010240) #24 NUBPL (ENSSCUG00000010286) #27 ARHGAP5 (ENSSCUG00000010290) #28 AKAP6 (ENSSCUG00000010292) #29 NPAS3 (ENSSCUG00000010293) #30 ENSSCUG00000010294 EGLN3 (ENSSCUG00000010295) #31 EAPP (ENSSCUG00000010297) #33 SNX6 (ENSSCUG00000010298) #34 CFL2 (ENSSCUG00000010299) #35 BAZ1A (ENSSCUG00000010301) #36 SOX3 (ENSSCUG00000010308) ENSSCUG00000010311 GABRA3 (ENSSCUG00000010312) Neognathae ANCESTRAL SPECIES 4 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Galloanserae ANCESTRAL SPECIES 4 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00960000192415 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Phasianidae ANCESTRAL SPECIES 4 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00960000192415 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Japanese quail MODERN SPECIES 23 SRP54 (ENSCJPG00005017701) ENSCJPG00005017700 BAZ1A (ENSCJPG00005017586) #36 CFL2 (ENSCJPG00005017583) #35 SNX6 (ENSCJPG00005017581) #34 EAPP (ENSCJPG00005017580) #33 SPTSSA (ENSCJPG00005017579) #32 EGLN3 (ENSCJPG00005017575) #31 NPAS3 (ENSCJPG00005017573) #30 FOXG1 (ENSCJPG00005017565) #16 PRKD1 (ENSCJPG00005017560) #17 G2E3 (ENSCJPG00005017559) #18 SCFD1 (ENSCJPG00005017558) #19 COCH (ENSCJPG00005017557) #20 STRN3 (ENSCJPG00005017556) #21 AP4S1 (ENSCJPG00005017555) #22 HECTD1 (ENSCJPG00005017554) #23 HEATR5A (ENSCJPG00005017553) #24 DTD2 (ENSCJPG00005017552) #25 NUBPL (ENSCJPG00005017551) #27 ARHGAP5 (ENSCJPG00005017550) #28 AKAP6 (ENSCJPG00005017548) #29 NOVA1 (ENSCJPG00005017546) #14 STXBP6 (ENSCJPG00005017540) #13 ENSCJPG00005017537 ACTC1 (ENSCJPG00005017536) AQR (ENSCJPG00005017534) ZNF770 (ENSCJPG00005017533) DPH6 (ENSCJPG00005017531) CDIN1 (ENSCJPG00005017526) ENSCJPG00005017524 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00960000192415 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Turkey MODERN SPECIES 25 ENSMGAG00000012079 ENSMGAG00000015818 ENSMGAG00000015347 KATNBL1 (ENSMGAG00000012067) ENSMGAG00000012054 ENSMGAG00000012047 ENSMGAG00000012050 SRP14 (ENSMGAG00000012029) ENSMGAG00000012028 FOXG1 (ENSMGAG00000021764) #16 PRKD1 (ENSMGAG00000011631) #17 G2E3 (ENSMGAG00000012370) #18 SCFD1 (ENSMGAG00000012377) #19 COCH (ENSMGAG00000012391) #20 STRN3 (ENSMGAG00000012362) #21 AP4S1 (ENSMGAG00000012406) #22 HECTD1 (ENSMGAG00000012408) #23 HEATR5A (ENSMGAG00000012421) #24 DTD2 (ENSMGAG00000012433) #25 ENSMGAG00000017755 NUBPL (ENSMGAG00000019955) #27 ARHGAP5 (ENSMGAG00000012438) #28 AKAP6 (ENSMGAG00000017059) #29 ENSMGAG00000016559 NPAS3 (ENSMGAG00000012451) #30 EGLN3 (ENSMGAG00000012453) #31 EAPP (ENSMGAG00000012459) #33 SNX6 (ENSMGAG00000017417) #34 CFL2 (ENSMGAG00000012456) #35 BAZ1A (ENSMGAG00000012463) #36 ENSMGAG00000012478 Chicken MODERN SPECIES 34 DPH6 (ENSGALG00010005407) ZNF770 (ENSGALG00010005428) AQR (ENSGALG00010005436) ACTC1 (ENSGALG00010005444) GJD2 (ENSGALG00010005967) STXBP6 (ENSGALG00010004416) #13 ENSGALG00010004429 ENSGALG00010004436 #14 NOVA1 (ENSGALG00010007328) #14 FOXG1 (ENSGALG00010006854) #16 PRKD1 (ENSGALG00010005458) #17 G2E3 (ENSGALG00010005489) #18 SCFD1 (ENSGALG00010005502) #19 COCH (ENSGALG00010005509) #20 STRN3 (ENSGALG00010005526) #21 AP4S1 (ENSGALG00010005535) #22 HECTD1 (ENSGALG00010005562) #23 HEATR5A (ENSGALG00010005578) #24 DTD2 (ENSGALG00010005617) #25 NUBPL (ENSGALG00010005696) #27 ARHGAP5 (ENSGALG00010005714) #28 AKAP6 (ENSGALG00010005763) #29 NPAS3 (ENSGALG00010005829) #30 ENSGALG00010005864 EGLN3 (ENSGALG00010005871) #31 SPTSSA (ENSGALG00010005900) #32 EAPP (ENSGALG00010005902) #33 SNX32 (ENSGALG00010005890) #34 CFL2 (ENSGALG00010006653) #35 BAZ1A (ENSGALG00010006673) #36 ENSGALG00010006685 Anatidae ANCESTRAL SPECIES 26 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b Pink-footed goose MODERN SPECIES 31 ENSABRG00000011727 CDIN1 (ENSABRG00000011734) DPH6 (ENSABRG00000011747) ZNF770 (ENSABRG00000011770) AQR (ENSABRG00000011774) ACTC1 (ENSABRG00000011806) ENSABRG00000011908 STXBP6 (ENSABRG00000011917) #13 NOVA1 (ENSABRG00000011921) #14 FOXG1 (ENSABRG00000011946) #16 PRKD1 (ENSABRG00000011989) #17 G2E3 (ENSABRG00000012051) #18 SCFD1 (ENSABRG00000012162) #19 COCH (ENSABRG00000012468) #20 STRN3 (ENSABRG00000012535) #21 AP4S1 (ENSABRG00000013147) #22 HECTD1 (ENSABRG00000013176) #23 HEATR5A (ENSABRG00000013782) #24 DTD2 (ENSABRG00000013834) #25 NUBPL (ENSABRG00000013842) #27 ARHGAP5 (ENSABRG00000013863) #28 AKAP6 (ENSABRG00000013882) #29 NPAS3 (ENSABRG00000013913) #30 EGLN3 (ENSABRG00000013942) #31 SPTSSA (ENSABRG00000013952) #32 EAPP (ENSABRG00000013967) #33 SNX6 (ENSABRG00000013972) #34 CFL2 (ENSABRG00000013987) #35 HRAS (ENSABRG00000014008) LRRC56 (ENSABRG00000014013) RASSF7 (ENSABRG00000014022) Duck MODERN SPECIES 23 CDIN1 (ENSAPLG00000007516) ENSAPLG00000007825 AQR (ENSAPLG00000008144) ACTC1 (ENSAPLG00000009291) ENSAPLG00000009429 STXBP6 (ENSAPLG00000006792) #13 ENSAPLG00000019466 NOVA1 (ENSAPLG00000008154) #14 ENSAPLG00000017372 FOXG1 (ENSAPLG00000027732) #16 PRKD1 (ENSAPLG00000014715) #17 G2E3 (ENSAPLG00000015236) #18 SCFD1 (ENSAPLG00000015536) #19 COCH (ENSAPLG00000015813) #20 STRN3 (ENSAPLG00000016038) #21 AP4S1 (ENSAPLG00000001781) #22 HECTD1 (ENSAPLG00000002424) #23 HEATR5A (ENSAPLG00000003094) #24 DTD2 (ENSAPLG00000003883) #25 NUBPL (ENSAPLG00000015416) #27 ARHGAP5 (ENSAPLG00000015365) #28 AKAP6 (ENSAPLG00000015214) #29 NPAS3 (ENSAPLG00000015085) #30 EGLN3 (ENSAPLG00000020625) #31 EAPP (ENSAPLG00000021600) #33 SNX6 (ENSAPLG00000011961) #34 CFL2 (ENSAPLG00000025574) #35 HRAS (ENSAPLG00000012248) ENSAPLG00000012427 ENSAPLG00000025316 IRF7 (ENSAPLG00000012752) Neognathae_b ANCESTRAL SPECIES 6 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Passeriformes ANCESTRAL SPECIES 5 ENSGT00940000156191 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00940000170035 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00940000156191 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332 #33 ENSGT00940000154940.p #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000156191 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332 #33 ENSGT00940000154940.p #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Passeroidea ANCESTRAL SPECIES 1 ENSGT00940000156191 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332 #33 ENSGT00940000154940.p #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Zebra finch MODERN SPECIES 27 CDIN1 (ENSTGUG00000011754) ENSTGUG00000028677 ENSTGUG00000019729 AQR (ENSTGUG00000011770) ACTC1 (ENSTGUG00000011789) ENSTGUG00000011793 STXBP6 (ENSTGUG00000011795) #13 NOVA1 (ENSTGUG00000020125) #14 FOXG1 (ENSTGUG00000022684) #16 ENSTGUG00000029310 PRKD1 (ENSTGUG00000011808) #17 G2E3 (ENSTGUG00000011816) #18 SCFD1 (ENSTGUG00000011823) #19 COCH (ENSTGUG00000011834) #20 STRN3 (ENSTGUG00000011841) #21 AP4S1 (ENSTGUG00000011859) #22 HECTD1 (ENSTGUG00000011864) #23 HEATR5A (ENSTGUG00000011873) #24 DTD2 (ENSTGUG00000011886) #25 NUBPL (ENSTGUG00000011890) #27 ARHGAP5 (ENSTGUG00000011900) #28 AKAP6 (ENSTGUG00000011906) #29 NPAS3 (ENSTGUG00000011912) #30 ENSTGUG00000027432 EGLN3 (ENSTGUG00000029575) #31 EAPP (ENSTGUG00000024220) #33 SNX6 (ENSTGUG00000011923) #34 CFL2 (ENSTGUG00000011931) #35 BAZ1A (ENSTGUG00000011934) #36 ENSTGUG00000011942 SRP54 (ENSTGUG00000011945) Common canary MODERN SPECIES 3 ENSSCAG00000011510 DPH6 (ENSSCAG00000011496) ZNF770 (ENSSCAG00000011483) AQR (ENSSCAG00000011467) ACTC1 (ENSSCAG00000011460) ENSSCAG00000011459 STXBP6 (ENSSCAG00000011450) #13 ENSSCAG00000011439 #14 ENSSCAG00000011436 #14 FOXG1 (ENSSCAG00000011429) #16 PRKD1 (ENSSCAG00000011406) #17 G2E3 (ENSSCAG00000011391) #18 SCFD1 (ENSSCAG00000011356) #19 COCH (ENSSCAG00000011326) #20 STRN3 (ENSSCAG00000011190) #21 AP4S1 (ENSSCAG00000011172) #22 HECTD1 (ENSSCAG00000011001) #23 HEATR5A (ENSSCAG00000010970) #24 DTD2 (ENSSCAG00000010966) #25 NUBPL (ENSSCAG00000010959) #27 ARHGAP5 (ENSSCAG00000010952) #28 AKAP6 (ENSSCAG00000010790) #29 NPAS3 (ENSSCAG00000010750) #30 ENSSCAG00000010705 EGLN3 (ENSSCAG00000010695) #31 ENSSCAG00000010660 EAPP (ENSSCAG00000010655) #33 ENSSCAG00000010652 #34 ENSSCAG00000010645 #34 CFL2 (ENSSCAG00000010641) #35 BAZ1A (ENSSCAG00000010530) #36 Medium ground finch MODERN SPECIES 4 ENSGFOG00000005229 ENSGFOG00000005212 DPH6 (ENSGFOG00000005191) ZNF770 (ENSGFOG00000005180) AQR (ENSGFOG00000004859) ACTC1 (ENSGFOG00000004813) ENSGFOG00000004805 STXBP6 (ENSGFOG00000004793) #13 NOVA1 (ENSGFOG00000004780) #14 ENSGFOG00000004765 PRKD1 (ENSGFOG00000004710) #17 G2E3 (ENSGFOG00000004680) #18 SCFD1 (ENSGFOG00000003995) #19 COCH (ENSGFOG00000003866) #20 STRN3 (ENSGFOG00000003655) #21 AP4S1 (ENSGFOG00000003601) #22 HECTD1 (ENSGFOG00000003495) #23 HEATR5A (ENSGFOG00000003447) #24 DTD2 (ENSGFOG00000003419) #25 NUBPL (ENSGFOG00000003402) #27 ARHGAP5 (ENSGFOG00000003373) #28 AKAP6 (ENSGFOG00000003343) #29 NPAS3 (ENSGFOG00000003313) #30 EGLN3 (ENSGFOG00000002947) #31 EAPP (ENSGFOG00000002927) #33 SNX6 (ENSGFOG00000002910) #34 CFL2 (ENSGFOG00000002878) #35 BAZ1A (ENSGFOG00000002793) #36 ENSGFOG00000002765 SRP54 (ENSGFOG00000002596) FAM177A1 (ENSGFOG00000002462) Flycatcher MODERN SPECIES 24 CDIN1 (ENSFALG00000005659) ENSFALG00000005664 DPH6 (ENSFALG00000005671) ZNF770 (ENSFALG00000005677) AQR (ENSFALG00000005683) ACTC1 (ENSFALG00000005688) GJD2 (ENSFALG00000022959) STXBP6 (ENSFALG00000025230) #13 NOVA1 (ENSFALG00000028001) #14 ENSFALG00000028363 FOXG1 (ENSFALG00000005708) #16 PRKD1 (ENSFALG00000005728) #17 G2E3 (ENSFALG00000005783) #18 COCH (ENSFALG00000005818) #20 STRN3 (ENSFALG00000005833) #21 AP4S1 (ENSFALG00000023839) #22 HECTD1 (ENSFALG00000005851) #23 ENSFALG00000027956 #24 DTD2 (ENSFALG00000028414) #25 NUBPL (ENSFALG00000027668) #27 ENSFALG00000025541 ARHGAP5 (ENSFALG00000005883) #28 AKAP6 (ENSFALG00000005900) #29 NPAS3 (ENSFALG00000005925) #30 EGLN3 (ENSFALG00000026324) #31 EAPP (ENSFALG00000028368) #33 SNX6 (ENSFALG00000005957) #34 CFL2 (ENSFALG00000024812) #35 BAZ1A (ENSFALG00000005979) #36 ENSFALG00000005984 SRP54 (ENSFALG00000005995) Great tit MODERN SPECIES 25 CDIN1 (ENSPMJG00000016597) ENSPMJG00000016598 DPH6 (ENSPMJG00000016602) ZNF770 (ENSPMJG00000016603) AQR (ENSPMJG00000016604) ACTC1 (ENSPMJG00000016605) ENSPMJG00000016606 STXBP6 (ENSPMJG00000016608) #13 NOVA1 (ENSPMJG00000016609) #14 FOXG1 (ENSPMJG00000016613) #16 PRKD1 (ENSPMJG00000016618) #17 G2E3 (ENSPMJG00000016619) #18 SCFD1 (ENSPMJG00000016620) #19 COCH (ENSPMJG00000016621) #20 STRN3 (ENSPMJG00000016622) #21 AP4S1 (ENSPMJG00000016623) #22 HECTD1 (ENSPMJG00000016624) #23 HEATR5A (ENSPMJG00000016642) #24 DTD2 (ENSPMJG00000016643) #25 ENSPMJG00000016644 NUBPL (ENSPMJG00000016645) #27 ARHGAP5 (ENSPMJG00000016648) #28 AKAP6 (ENSPMJG00000016649) #29 NPAS3 (ENSPMJG00000016650) #30 EGLN3 (ENSPMJG00000016652) #31 SPTSSA (ENSPMJG00000016654) #32 EAPP (ENSPMJG00000016655) #33 SNX6 (ENSPMJG00000016656) #34 CFL2 (ENSPMJG00000016657) #35 BAZ1A (ENSPMJG00000016658) #36 ENSPMJG00000016659 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00550000074824 Kakapo MODERN SPECIES 21 DPH6 (ENSSHBG00005015364) ZNF770 (ENSSHBG00005015361) AQR (ENSSHBG00005015355) ACTC1 (ENSSHBG00005015350) ENSSHBG00005015347 ENSSHBG00005015341 STXBP6 (ENSSHBG00005015337) #13 NOVA1 (ENSSHBG00005015333) #14 ENSSHBG00005015327 FOXG1 (ENSSHBG00005015301) #16 PRKD1 (ENSSHBG00005010583) #17 G2E3 (ENSSHBG00005000523) #18 SCFD1 (ENSSHBG00005000517) #19 COCH (ENSSHBG00005004736) #20 STRN3 (ENSSHBG00005004714) #21 AP4S1 (ENSSHBG00005004700) #22 HECTD1 (ENSSHBG00005004649) #23 HEATR5A (ENSSHBG00005004034) #24 DTD2 (ENSSHBG00005003767) #25 NUBPL (ENSSHBG00005003744) #27 ARHGAP5 (ENSSHBG00005003726) #28 AKAP6 (ENSSHBG00005003692) #29 NPAS3 (ENSSHBG00005003672) #30 EGLN3 (ENSSHBG00005003658) #31 SPTSSA (ENSSHBG00005003649) #32 EAPP (ENSSHBG00005003642) #33 SNX6 (ENSSHBG00005003622) #34 CFL2 (ENSSHBG00005003606) #35 BAZ1A (ENSSHBG00005003560) #36 ENSSHBG00005003529 SRP54 (ENSSHBG00005003516) Golden eagle MODERN SPECIES 11 MEIS2 (ENSACCG00020001693) ENSACCG00020001683 CDIN1 (ENSACCG00020001673) DPH6 (ENSACCG00020001640) ZNF770 (ENSACCG00020001612) AQR (ENSACCG00020001515) ACTC1 (ENSACCG00020001493) ENSACCG00020001482 STXBP6 (ENSACCG00020001462) #13 NOVA1 (ENSACCG00020001434) #14 FOXG1 (ENSACCG00020001418) #16 PRKD1 (ENSACCG00020001378) #17 SCFD1 (ENSACCG00020001288) #19 COCH (ENSACCG00020001226) #20 STRN3 (ENSACCG00020001183) #21 AP4S1 (ENSACCG00020001142) #22 HECTD1 (ENSACCG00020000924) #23 HEATR5A (ENSACCG00020000762) #24 DTD2 (ENSACCG00020000678) #25 NUBPL (ENSACCG00020000650) #27 ARHGAP5 (ENSACCG00020000601) #28 AKAP6 (ENSACCG00020000582) #29 NPAS3 (ENSACCG00020000519) #30 EGLN3 (ENSACCG00020000405) #31 SPTSSA (ENSACCG00020000395) #32 EAPP (ENSACCG00020000384) #33 SNX6 (ENSACCG00020000377) #34 CFL2 (ENSACCG00020000332) #35 BAZ1A (ENSACCG00020000305) #36 ENSACCG00020000294 SRP54 (ENSACCG00020000288) Australian saltwater crocodile MODERN SPECIES 64 CDIN1 (ENSCPRG00005018868) DPH6 (ENSCPRG00005018877) ENSCPRG00005018885 ZNF770 (ENSCPRG00005018886) AQR (ENSCPRG00005018887) ACTC1 (ENSCPRG00005018901) ENSCPRG00005018903 STXBP6 (ENSCPRG00005018904) #13 ENSCPRG00005018908 NOVA1 (ENSCPRG00005018909) #14 FOXG1 (ENSCPRG00005000210) #16 PRKD1 (ENSCPRG00005000356) #17 SCFD1 (ENSCPRG00005000469) #19 COCH (ENSCPRG00005000540) #20 STRN3 (ENSCPRG00005000658) #21 AP4S1 (ENSCPRG00005001250) #22 HECTD1 (ENSCPRG00005001329) #23 HEATR5A (ENSCPRG00005002056) #24 DTD2 (ENSCPRG00005003165) #25 NUBPL (ENSCPRG00005003181) #27 ARHGAP5 (ENSCPRG00005003188) #28 AKAP6 (ENSCPRG00005003219) #29 NPAS3 (ENSCPRG00005003280) #30 ENSCPRG00005003366 EGLN3 (ENSCPRG00005003375) #31 SPTSSA (ENSCPRG00005003398) #32 EAPP (ENSCPRG00005003401) #33 SNX6 (ENSCPRG00005003417) #34 CFL2 (ENSCPRG00005003558) #35 BAZ1A (ENSCPRG00005003577) #36 ENSCPRG00005003622 Cryptodira ANCESTRAL SPECIES 3 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Chinese turtle MODERN SPECIES 559 G2E3 (ENSPSIG00000013682) #18 SCFD1 (ENSPSIG00000011061) #19 ENSPSIG00000011023 COCH (ENSPSIG00000009539) #20 ENSPSIG00000001150 STRN3 (ENSPSIG00000006823) #21 AP4S1 (ENSPSIG00000006800) #22 HECTD1 (ENSPSIG00000005810) #23 HEATR5A (ENSPSIG00000012315) #24 DTD2 (ENSPSIG00000011850) #25 NUBPL (ENSPSIG00000011296) #27 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Testudinidae ANCESTRAL SPECIES 2 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.n #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00550000074824 Abingdon island giant tortoise MODERN SPECIES 13 COCH (ENSCABG00000010049) #20 STRN3 (ENSCABG00000008415) #21 AP4S1 (ENSCABG00000008367) #22 HECTD1 (ENSCABG00000007872) #23 HEATR5A (ENSCABG00000007861) #24 DTD2 (ENSCABG00000007860) #25 NUBPL (ENSCABG00000007858) #27 Goode s thornscrub tortoise MODERN SPECIES 18 ZNF770 (ENSGEVG00005003311) AQR (ENSGEVG00005003280) ACTC1 (ENSGEVG00005003255) ENSGEVG00005003247 STXBP6 (ENSGEVG00005003241) #13 ENSGEVG00005003232 #14 ENSGEVG00005003221 #14 FOXG1 (ENSGEVG00005003211) #16 PRKD1 (ENSGEVG00005003149) #17 ENSGEVG00005003102 #18 ENSGEVG00005003087 #18 SCFD1 (ENSGEVG00005003003) #19 ENSGEVG00005002963 #20 ENSGEVG00005002940 #20 STRN3 (ENSGEVG00005002888) #21 AP4S1 (ENSGEVG00005002860) #22 HEATR5A (ENSGEVG00005001307) #24 DTD2 (ENSGEVG00005000160) #25 NUBPL (ENSGEVG00005000120) #27 ARHGAP5 (ENSGEVG00005000079) #28 ENSGEVG00005003955 AKAP6 (ENSGEVG00005003920) #29 NPAS3 (ENSGEVG00005003782) #30 EGLN3 (ENSGEVG00005003725) #31 SPTSSA (ENSGEVG00005003714) #32 EAPP (ENSGEVG00005003705) #33 SNX6 (ENSGEVG00005003670) #34 CFL2 (ENSGEVG00005003634) #35 BAZ1A (ENSGEVG00005003590) #36 ENSGEVG00005003559 SRP54 (ENSGEVG00005003538) Emydidae ANCESTRAL SPECIES 2 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573.m.b #14 ENSGT00940000155573.m.a #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT01020000230798 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 Three-toed box turtle MODERN SPECIES 40 ENSTMTG00000008682 ZNF770 (ENSTMTG00000008699) AQR (ENSTMTG00000008715) ACTC1 (ENSTMTG00000008781) ENSTMTG00000008813 ENSTMTG00000008823 #13 ENSTMTG00000008834 #14 ENSTMTG00000008842 #14 FOXG1 (ENSTMTG00000008849) #16 PRKD1 (ENSTMTG00000008880) #17 G2E3 (ENSTMTG00000009102) #18 SCFD1 (ENSTMTG00000009144) #19 ENSTMTG00000009193 #20 ENSTMTG00000009208 #20 STRN3 (ENSTMTG00000009240) #21 AP4S1 (ENSTMTG00000009331) #22 HECTD1 (ENSTMTG00000009351) #23 HEATR5A (ENSTMTG00000009443) #24 DTD2 (ENSTMTG00000009510) #25 NUBPL (ENSTMTG00000009520) #27 ARHGAP5 (ENSTMTG00000009538) #28 AKAP6 (ENSTMTG00000009566) #29 NPAS3 (ENSTMTG00000009693) #30 ENSTMTG00000010048 EGLN3 (ENSTMTG00000010061) #31 SPTSSA (ENSTMTG00000010079) #32 EAPP (ENSTMTG00000010091) #33 SNX6 (ENSTMTG00000010145) #34 CFL2 (ENSTMTG00000010187) #35 BAZ1A (ENSTMTG00000010196) #36 ENSTMTG00000010311 painted turtle MODERN SPECIES 13 CRACD (ENSCPBG00000025111) AASDH (ENSCPBG00000025116) PPAT (ENSCPBG00000025119) ENSCPBG00000025122 PAICS (ENSCPBG00000025123) LONRF1 (ENSCPBG00000025127) TRMT9B (ENSCPBG00000025129) DLC1 (ENSCPBG00000025130) ENSCPBG00000025134 FOXG1 (ENSCPBG00000025135) #16 PRKD1 (ENSCPBG00000025145) #17 G2E3 (ENSCPBG00000025254) #18 SCFD1 (ENSCPBG00000025264) #19 COCH (ENSCPBG00000025281) #20 STRN3 (ENSCPBG00000025355) #21 AP4S1 (ENSCPBG00000025936) #22 HECTD1 (ENSCPBG00000025954) #23 HEATR5A (ENSCPBG00000026015) #24 DTD2 (ENSCPBG00000026177) #25 NUBPL (ENSCPBG00000026179) #27 ARHGAP5 (ENSCPBG00000026180) #28 AKAP6 (ENSCPBG00000026181) #29 ENSCPBG00000026183 #30 ENSCPBG00000026185 #30 ENSCPBG00000026186 ENSCPBG00000026187 SPTSSA (ENSCPBG00000026189) #32 EAPP (ENSCPBG00000026190) #33 SNX6 (ENSCPBG00000026191) #34 CFL2 (ENSCPBG00000026192) #35 BAZ1A (ENSCPBG00000026193) #36 Anura ANCESTRAL SPECIES 51 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000161963 ENSGT00940000156668 ENSGT00940000154710.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.b ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00940000159230 ENSGT00940000159481 ENSGT00530000063596.B ENSGT01030000234606.a.a.a.a Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000028984 ENSLLEG00000028978 ENSLLEG00000028967 ENSLLEG00000028959 ENSLLEG00000028946 ENSLLEG00000028935 ENSLLEG00000028921 FBXO33 (ENSLLEG00000028885) ENSLLEG00000028871 ENSLLEG00000028175 G2E3 (ENSLLEG00000028014) #18 SCFD1 (ENSLLEG00000027389) #19 ENSLLEG00000027279 COCH (ENSLLEG00000026986) #20 ENSLLEG00000026580 ##21 AP4S1 (ENSLLEG00000026477) #22 HECTD1 (ENSLLEG00000026038) #23 HEATR5A (ENSLLEG00000025581) #24 DTD2 (ENSLLEG00000025505) #25 NUBPL (ENSLLEG00000025415) #27 ARHGAP5 (ENSLLEG00000025318) #28 SPTLC2 (ENSLLEG00000025179) ENSLLEG00000025088 ENSLLEG00000025026 AHSA1 (ENSLLEG00000024801) VIPAS39 (ENSLLEG00000024632) NOXRED1 (ENSLLEG00000024535) TMED8 (ENSLLEG00000024475) ENSLLEG00000024315 GSTZ1 (ENSLLEG00000024088) POMT2 (ENSLLEG00000023528) Frog MODERN SPECIES 8 dph6 (ENSXETG00000012897) znf770 (ENSXETG00000044221) aqr (ENSXETG00000012901) actc1 (ENSXETG00000012911) gjd2 (ENSXETG00000048635) ENSXETG00000045860 stxbp6 (ENSXETG00000024859) #13 nova1 (ENSXETG00000010244) #14 ENSXETG00000044149 foxg1 (ENSXETG00000010247) #16 prkd1 (ENSXETG00000010248) #17 g2e3 (ENSXETG00000014180) #18 scfd1 (ENSXETG00000014165) #19 coch (ENSXETG00000014163) #20 strn3 (ENSXETG00000014156) ##21 ap4s1 (ENSXETG00000014154) #22 hectd1 (ENSXETG00000014149) #23 heatr5a (ENSXETG00000014133) #24 dtd2 (ENSXETG00000014131) #25 nubpl (ENSXETG00000048432) #27 arhgap5 (ENSXETG00000014123) #28 akap6 (ENSXETG00000014113) #29 npas3 (ENSXETG00000038495) #30 egln3 (ENSXETG00000034504) #31 sptssa (ENSXETG00000048311) #32 ganc (ENSXETG00000000302) tmem87a (ENSXETG00000020990) vps39 (ENSXETG00000000301) pla2g4f (ENSXETG00000000299) gemin2 (ENSXETG00000000298) ENSXETG00000046728 Coelacanth MODERN SPECIES 1536 opn6b (ENSLACG00000011723) COCH (ENSLACG00000010719) #20 STRN3 (ENSLACG00000009436) #21 AP4S1 (ENSLACG00000009260) #22 ENSLACG00000009234 HECTD1 (ENSLACG00000007980) #23 HEATR5A (ENSLACG00000006330) #24 DTD2 (ENSLACG00000005457) #25 NUBPL (ENSLACG00000004719) #27 ARHGAP5 (ENSLACG00000001505) #28 Actinopterygii ANCESTRAL SPECIES 59 ENSGT00940000159180 ENSGT00940000155643 ENSGT00390000018465 ENSGT00420000029820 ENSGT00940000156668 ENSGT00940000154710.a.b.b ENSGT01090000260005.a.b.a.b.a.b ENSGT00940000156499 #13 ENSGT00940000155573 #14 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Neopterygii ANCESTRAL SPECIES 43 ENSGT00390000007463 ENSGT00940000163836.b ENSGT00940000155654 ENSGT00390000018116 ENSGT00940000157283 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000158601 ENSGT00940000161549.b ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.a #21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Osteoglossocephalai ANCESTRAL SPECIES 13 ENSGT00940000160538 ENSGT00940000155654 ENSGT00390000018116 ENSGT00940000157283 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000158601 ENSGT00940000161549.b ENSGT00940000167604 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00940000155704 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 Osteoglossiformes ANCESTRAL SPECIES 25 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00550000074824 Asian bonytongue MODERN SPECIES 18 rbm4.3 (ENSSFOG00015015563) pmt (ENSSFOG00015015493) cnot8 (ENSSFOG00015015453) ENSSFOG00015014927 tbx20 (ENSSFOG00015014861) PTPN21 (ENSSFOG00015014833) BDKRB2 (ENSSFOG00015014813) ENSSFOG00015014804 foxg1a (ENSSFOG00015014800) #16 ENSSFOG00015014792 PRKD1 (ENSSFOG00015014764) #17 g2e3 (ENSSFOG00015014745) #18 scfd1 (ENSSFOG00015014709) #19 coch (ENSSFOG00015014673) #20 strn3 (ENSSFOG00015014593) ##21 ap4s1 (ENSSFOG00015014560) #22 hectd1 (ENSSFOG00015014489) #23 HEATR5A (ENSSFOG00015014376) #24 dtd2 (ENSSFOG00015031243) #25 nubpl (ENSSFOG00015014340) #27 ARHGAP5 (ENSSFOG00015014323) #28 AKAP6 (ENSSFOG00015014266) #29 NPAS3 (ENSSFOG00015032174) #30 egln3 (ENSSFOG00015032021) #31 sptssa (ENSSFOG00015026974) #32 eapp (ENSSFOG00015014177) #33 snx6 (ENSSFOG00015014115) #34 cfl2 (ENSSFOG00015030770) #35 BAZ1A (ENSSFOG00015014035) #36 zgc:109986 (ENSSFOG00015013998) srp54 (ENSSFOG00015013920) P. kingsleyae MODERN SPECIES 454 ENSPKIG00000013206 coch (ENSPKIG00000013154) #20 ENSPKIG00000013119 ENSPKIG00000013108 strn3 (ENSPKIG00000013006) ##21 ap4s1 (ENSPKIG00000012967) #22 ENSPKIG00000012953 ENSPKIG00000012935 ENSPKIG00000012924 hectd1 (ENSPKIG00000012862) #23 HEATR5A (ENSPKIG00000012520) #24 Clupeocephala ANCESTRAL SPECIES 14 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.b #25 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 Otomorpha ANCESTRAL SPECIES 332 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.b #25 Otophysi ANCESTRAL SPECIES 156 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000007395 ENSGT00530000069038 ENSGT00940000155369.A.d.a ENSGT00390000012435 ENSGT00940000157509.a ENSGT00510000048466 ENSGT00940000158830 ENSGT00940000157150 ENSGT00390000018516 ENSGT00940000159582 ENSGT00390000007686.b.c.b ENSGT00940000156103 ENSGT01030000234906 Characiphysae ANCESTRAL SPECIES 4 ENSGT00940000156798.h ENSGT00940000156798.g ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000007395 ENSGT00530000069038 ENSGT00940000155369.A.d.a ENSGT00390000012435 ENSGT00940000157509.a ENSGT00510000048466 ENSGT00940000158830 ENSGT00940000157150 ENSGT00390000018516 ENSGT00940000159582 ENSGT00390000007686.b.c.b ENSGT01030000234906 ENSGT00990000204360 Characiphysae_b ANCESTRAL SPECIES 20 ENSGT00940000164910 ENSGT00940000175994 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000007395 ENSGT00940000180386 ENSGT00530000069038 ENSGT00940000155369.A.d.a ENSGT00390000012435 ENSGT00940000157509.a ENSGT00510000048466 ENSGT00940000158830 ENSGT00940000157150 ENSGT00390000018516 ENSGT00940000159582 ENSGT00390000007686.b.c.b ENSGT01030000234906 Characoidei ANCESTRAL SPECIES 36 ENSGT00940000164910 ENSGT00940000175994 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000007395 ENSGT00530000069038 ENSGT00940000155369.A.d.a ENSGT00390000012435 ENSGT00940000157509.a ENSGT00510000048466 ENSGT00940000158830 ENSGT00940000157150 ENSGT00390000018516 ENSGT00940000159582 ENSGT00390000007686.b.c.b ENSGT00940000156103 ENSGT01030000234906 Red-bellied piranha MODERN SPECIES 90 ENSPNAG00000019507 bmf1 (ENSPNAG00000019481) tecpr2 (ENSPNAG00000019470) ankrd9 (ENSPNAG00000019457) rcor1 (ENSPNAG00000019427) traf3 (ENSPNAG00000003593) ehd4 (ENSPNAG00000019307) ENSPNAG00000019263 foxg1a (ENSPNAG00000003576) #16 PRKD1 (ENSPNAG00000019084) #17 g2e3 (ENSPNAG00000003565) #18 scfd1 (ENSPNAG00000018968) #19 opn6b (ENSPNAG00000018863) coch (ENSPNAG00000018823) #20 strn3 (ENSPNAG00000018794) ##21 ap4s1 (ENSPNAG00000018724) #22 hectd1 (ENSPNAG00000018701) #23 Mexicana tetra MODERN SPECIES 24 ankrd9 (ENSAMXG00000025912) rcor1 (ENSAMXG00000008399) ENSAMXG00000038374 TRAF3 (ENSAMXG00000029095) ehd4 (ENSAMXG00000008348) ENSAMXG00000040047 ENSAMXG00000030538 ENSAMXG00000008296 foxg1a (ENSAMXG00000025911) #16 PRKD1 (ENSAMXG00000041872) #17 g2e3 (ENSAMXG00000008189) #18 scfd1 (ENSAMXG00000038055) #19 opn6b (ENSAMXG00000031878) coch (ENSAMXG00000008138) #20 strn3 (ENSAMXG00000008128) ##21 ap4s1 (ENSAMXG00000008113) #22 hectd1 (ENSAMXG00000008101) #23 HEATR5A (ENSAMXG00000008093) #24 ENSAMXG00000008076 MDGA2 (ENSAMXG00000033842) pole2 (ENSAMXG00000020108) ENSAMXG00000020153 dnaaf2 (ENSAMXG00000020173) lrr1 (ENSAMXG00000020181) KLHDC2 (ENSAMXG00000034271) NEMF (ENSAMXG00000020200) MOK (ENSAMXG00000020213) WDR20 (ENSAMXG00000043453) DYNC1H1 (ENSAMXG00000020234) ENSAMXG00000037734 ENSAMXG00000032337 Electric eel MODERN SPECIES 42 EIF2AK4 (ENSEEEG00000002488) ENSEEEG00000002484 bmf1 (ENSEEEG00000002481) tecpr2 (ENSEEEG00000002473) ankrd9 (ENSEEEG00000002469) rcor1 (ENSEEEG00000002466) traf3 (ENSEEEG00000002463) ehd4 (ENSEEEG00000002460) ENSEEEG00000002453 foxg1a (ENSEEEG00000002450) #16 PRKD1 (ENSEEEG00000002449) #17 g2e3 (ENSEEEG00000002446) #18 scfd1 (ENSEEEG00000001975) #19 coch (ENSEEEG00000001946) #20 strn3 (ENSEEEG00000001466) ##21 ap4s1 (ENSEEEG00000001459) #22 hectd1 (ENSEEEG00000001458) #23 HEATR5A (ENSEEEG00000000618) #24 mis18bp1 (ENSEEEG00000000235) ENSEEEG00000000224 MDGA2 (ENSEEEG00000000206) pole2 (ENSEEEG00000000140) ENSEEEG00000022844 ENSEEEG00000022842 gpc2 (ENSEEEG00000022836) ENSEEEG00000022833 zgc:112148 (ENSEEEG00000022831) ENSEEEG00000022830 ENSEEEG00000022829 USH1G (ENSEEEG00000022828) OTOP2 (ENSEEEG00000022827) Channel catfish MODERN SPECIES 28 ENSIPUG00000018349 Bmf (ENSIPUG00000018334) ankrd9 (ENSIPUG00000018327) tecpr2 (ENSIPUG00000018313) ankrd9 (ENSIPUG00000018301) rcor1 (ENSIPUG00000018261) traf3 (ENSIPUG00000018223) ehd4 (ENSIPUG00000018207) sptbn5 (ENSIPUG00000017917) foxg1a (ENSIPUG00000017896) #16 prkd1 (ENSIPUG00000017836) #17 G2e3 (ENSIPUG00000017787) #18 SCFD1 (ENSIPUG00000017592) #19 coch (ENSIPUG00000017549) #20 strn3 (ENSIPUG00000017513) ##21 ap4s1 (ENSIPUG00000017502) #22 hectd1 (ENSIPUG00000017420) #23 heatr5a (ENSIPUG00000017162) #24 mis18bp1 (ENSIPUG00000017101) ENSIPUG00000017073 ENSIPUG00000017059 MDGA2 (ENSIPUG00000016863) pole2 (ENSIPUG00000016731) klhdc1 (ENSIPUG00000016683) ENSIPUG00000016667 lrr1 (ENSIPUG00000016642) KLHDC2 (ENSIPUG00000016610) NEMF (ENSIPUG00000016545) mok (ENSIPUG00000016506) WDR20 (ENSIPUG00000016472) ENSIPUG00000016452 Cyprinoidei ANCESTRAL SPECIES 8 ENSGT00940000153881.a ENSGT00940000156570.b ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000007395 ENSGT00530000069038 ENSGT00940000155369.A.d.a ENSGT00940000154484.B.a.b.b.a ENSGT01010000222287.B.b.a.b.a ENSGT00390000004660.C.a.b ENSGT00940000157193 ENSGT00950000182852.A.b ENSGT01060000248589.D ENSGT00940000165937 ENSGT00940000157330 ENSGT00940000163885 ENSGT00530000063353.a.a Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 205 ENSGT00940000153881.a.a.b ENSGT00940000156570.b.b ENSGT00940000157283.a ENSGT00390000018116.f ENSGT00940000155654.fb.a ENSGT00940000163836.b.a ENSGT00940000158601.m ENSGT00940000161549.a.a ENSGT00940000160678.a.x.a.a #16 ENSGT00950000183024.a.b.a.a #17 ENSGT00950000182865.b.a.a.e #18 ENSGT00550000074845.a #19 ENSGT01100000263524.G.e.a ENSGT00940000159386.l #20 ENSGT00950000183095.a.b.a.a.b ##21 ENSGT00970000193421.B.bb.a #22 ENSGT00940000156572.c #23 ENSGT00390000006205.b.s #24 ENSGT00390000007395.c ENSGT00530000069038 ENSGT00940000155369.A.d.a.j ENSGT01010000222287.B.b.a.b.a ENSGT00390000004660.C.a.b.b ENSGT00940000157193.a ENSGT00950000182852.A.b.d ENSGT01060000248589.D.a ENSGT00940000165937.a ENSGT00940000157330.n.a ENSGT00940000163885.m ENSGT00530000063353.a.a.a ENSGT00940000156761.a.b Cyprininae_a ANCESTRAL SPECIES 187 ENSGT00940000153881.a.a.b ENSGT00940000156570.b.b ENSGT00940000157283.a ENSGT00390000018116.f ENSGT00940000155654.fb.a ENSGT00940000163836.b.a ENSGT00940000158601.m ENSGT00940000161549.a.a ENSGT00940000160678.a.x.a.a #16 ENSGT00950000183024.a.b.a.a #17 ENSGT00950000182865.b.a.a.e #18 ENSGT00550000074845.a #19 ENSGT01100000263524.G.e.a ENSGT00940000159386.l #20 ENSGT00950000183095.a.b.a.a.b ##21 ENSGT00970000193421.B.bb.a #22 ENSGT00940000156572.c #23 ENSGT00390000006205.b.s #24 ENSGT00390000007395.c ENSGT00530000069038 ENSGT00940000155369.A.d.a.j ENSGT01010000222287.B.b.a.b.a ENSGT00390000004660.C.a.b.b ENSGT00940000157193.a ENSGT00950000182852.A.b.d ENSGT01060000248589.D.a ENSGT00940000165937.a ENSGT00940000157330.n.a ENSGT00940000163885.m ENSGT00940000170356 ENSGT00530000063353.a.a.a Common carp reference MODERN SPECIES 30 spata17 (ENSCCRG00000020428) esrrga (ENSCCRG00000071452) ENSCCRG00000003904 ptpreb (ENSCCRG00000027584) tecpr2 (ENSCCRG00000027643) rcor1 (ENSCCRG00000026947) traf3 (ENSCCRG00000026952) ehd4 (ENSCCRG00000026971) ENSCCRG00000015340 foxg1a (ENSCCRG00000015423) #16 PRKD1 (ENSCCRG00000015041) #17 g2e3 (ENSCCRG00000049295) #18 scfd1 (ENSCCRG00000015700) #19 coch (ENSCCRG00000015844) #20 strn3 (ENSCCRG00000049681) ##21 ap4s1 (ENSCCRG00000055253) #22 hectd1 (ENSCCRG00000057578) #23 HEATR5A (ENSCCRG00000025920) #24 mis18bp1 (ENSCCRG00000080791) ENSCCRG00000045322 ENSCCRG00000025542 ENSCCRG00000054524 tmem30b (ENSCCRG00000011263) kdm1a (ENSCCRG00000011285) ENSCCRG00000012856 ENSCCRG00000030436 qkia (ENSCCRG00000023635) pacrg (ENSCCRG00000052495) ctsl.1 (ENSCCRG00000043192) vgll2b (ENSCCRG00000043185) ythdf2 (ENSCCRG00000043130) Golden-line barbel MODERN SPECIES 133 esrrga (ENSSGRG00000042284) ENSSGRG00000042282 ENSSGRG00000042199 ENSSGRG00000042197 ptpreb (ENSSGRG00000038982) tecpr2 (ENSSGRG00000038766) ankrd9 (ENSSGRG00000038756) rcor1 (ENSSGRG00000038753) traf3 (ENSSGRG00000038747) ENSSGRG00000038746 ENSSGRG00000038744 PRKD1 (ENSSGRG00000038586) #17 scfd1 (ENSSGRG00000037913) #19 opn6b (ENSSGRG00000037902) coch (ENSSGRG00000037901) #20 ap4s1 (ENSSGRG00000037900) #22 strn3 (ENSSGRG00000037496) ##21 hectd1 (ENSSGRG00000037381) #23 HEATR5A (ENSSGRG00000036382) #24 mis18bp1 (ENSSGRG00000036378) MDGA2 (ENSSGRG00000036376) htr1d (ENSSGRG00000036375) kdm1a (ENSSGRG00000034954) LUZP1 (ENSSGRG00000034911) PTAFR (ENSSGRG00000034910) qkia (ENSSGRG00000034826) pacrg (ENSSGRG00000034823) ctsl.1 (ENSSGRG00000034822) ctsl.1 (ENSSGRG00000034821) ENSSGRG00000034820 ENSSGRG00000034819 Goldfish MODERN SPECIES 8 KCTD3 (ENSCARG00000043801) ptpreb (ENSCARG00000041130) tecpr2 (ENSCARG00000040136) ankrd9 (ENSCARG00000040097) rcor1 (ENSCARG00000039984) traf3 (ENSCARG00000039882) ehd4 (ENSCARG00000039847) ENSCARG00000039355 foxg1a (ENSCARG00000039309) #16 PRKD1 (ENSCARG00000035239) #17 g2e3 (ENSCARG00000034970) #18 scfd1 (ENSCARG00000033404) #19 opn6b (ENSCARG00000033259) coch (ENSCARG00000033246) #20 strn3 (ENSCARG00000033055) ##21 ap4s1 (ENSCARG00000033021) #22 hectd1 (ENSCARG00000032879) #23 HEATR5A (ENSCARG00000030206) #24 ENSCARG00000030080 MDGA2 (ENSCARG00000029307) ENSCARG00000029269 tmem30b (ENSCARG00000029244) kdm1a (ENSCARG00000029095) ENSCARG00000029077 ENSCARG00000029064 fam149b1 (ENSCARG00000029033) mrpl57 (ENSCARG00000029017) ttc7b (ENSCARG00000028166) calm1a (ENSCARG00000028100) ENSCARG00000027972 pgrmc2 (ENSCARG00000027959) Cyprininae ANCESTRAL SPECIES 325 ENSGT00940000158456 ENSGT00940000153881.a.a.a ENSGT00940000156570.b.a ENSGT00940000157283.b ENSGT00390000018116.e ENSGT00940000155654.fb.b ENSGT00940000163836.b.b ENSGT00940000158601.n ENSGT00940000160678.a.x.a.b #16 ENSGT00950000183024.a.b.a.b #17 ENSGT00950000182865.b.a.a.f #18 ENSGT00550000074845.b #19 ENSGT01100000263524.G.e.b ENSGT00940000159386.k #20 ENSGT00950000183095.a.b.a.a.a ##21 ENSGT00970000193421.B.bb.b #22 ENSGT00940000156572.d #23 ENSGT00390000006205.b.t #24 ENSGT00390000007395.d ENSGT00940000155369.A.d.a.i ENSGT00940000154484.B.a.b.b.a ENSGT00390000004660.C.a.b.a ENSGT00940000157193.b ENSGT00950000182852.A.b.c ENSGT01060000248589.D.b ENSGT00940000165937.b Cyprininae_a ANCESTRAL SPECIES 58 ENSGT00940000158456 ENSGT00940000153881.a.a.a ENSGT00940000156570.b.a ENSGT00940000157283.b ENSGT00390000018116.e ENSGT00940000155654.fb.b ENSGT00940000163836.b.b ENSGT00940000158601.n ENSGT00940000160678.a.x.a.b #16 ENSGT00950000183024.a.b.a.b #17 ENSGT00950000182865.b.a.a.f #18 ENSGT00550000074845.b #19 ENSGT01100000263524.G.e.b ENSGT00940000159386.k #20 ENSGT00950000183095.a.b.a.a.a ##21 ENSGT00970000193421.B.bb.b #22 ENSGT00940000156572.d #23 ENSGT00390000006205.b.t #24 ENSGT00390000007395.d ENSGT00940000155369.A.d.a.i ENSGT00940000154484.B.a.b.b.a ENSGT00390000004660.C.a.b.a ENSGT00940000157193.b ENSGT00950000182852.A.b.c ENSGT01060000248589.D.b ENSGT00940000165937.b ENSGT00940000157330.n.b ENSGT00940000163885.n ENSGT00530000063353.a.a.b ENSGT00940000156761.a.a ENSGT00950000185141 Golden-line barbel MODERN SPECIES 3 USH2A (ENSSGRG00000014605) KCTD3 (ENSSGRG00000014613) ptpreb (ENSSGRG00000014741) tecpr2 (ENSSGRG00000015947) ankrd9 (ENSSGRG00000016093) rcor1 (ENSSGRG00000016095) traf3 (ENSSGRG00000016096) ehd4 (ENSSGRG00000016213) ENSSGRG00000016214 PRKD1 (ENSSGRG00000016224) #17 g2e3 (ENSSGRG00000016239) #18 scfd1 (ENSSGRG00000016241) #19 opn6b (ENSSGRG00000016648) coch (ENSSGRG00000016659) #20 strn3 (ENSSGRG00000016669) ##21 ap4s1 (ENSSGRG00000017107) #22 hectd1 (ENSSGRG00000017121) #23 HEATR5A (ENSSGRG00000018206) #24 mis18bp1 (ENSSGRG00000021047) MDGA2 (ENSSGRG00000021053) ENSSGRG00000021210 tmem30b (ENSSGRG00000021211) kdm1a (ENSSGRG00000021251) PTAFR (ENSSGRG00000022412) qkia (ENSSGRG00000022414) pacrg (ENSSGRG00000022470) ctsl.1 (ENSSGRG00000022471) vgll2b (ENSSGRG00000022472) ythdf2 (ENSSGRG00000022473) ENSSGRG00000022477 id3 (ENSSGRG00000022478) Goldfish MODERN SPECIES 3090 esrrga (ENSCARG00000053862) USH2A (ENSCARG00000053901) ENSCARG00000054886 ptpreb (ENSCARG00000054916) tecpr2 (ENSCARG00000056305) ankrd9 (ENSCARG00000056402) rcor1 (ENSCARG00000056408) traf3 (ENSCARG00000056615) ehd4 (ENSCARG00000056630) foxg1a (ENSCARG00000056644) #16 PRKD1 (ENSCARG00000056713) #17 g2e3 (ENSCARG00000057871) #18 scfd1 (ENSCARG00000058103) #19 coch (ENSCARG00000058904) #20 strn3 (ENSCARG00000059044) ##21 ap4s1 (ENSCARG00000062380) #22 hectd1 (ENSCARG00000062411) #23 ENSCARG00000062691 mis18bp1 (ENSCARG00000062711) MDGA2 (ENSCARG00000062741) ENSCARG00000062994 tmem30b (ENSCARG00000063005) kdm1a (ENSCARG00000063045) LUZP1 (ENSCARG00000063172) PTAFR (ENSCARG00000063176) ENSCARG00000063186 qkia (ENSCARG00000063195) ENSCARG00000063222 ENSCARG00000063229 Cyprininae ANCESTRAL SPECIES ENSGT00970000193421.B.cb #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00970000193421.B.cb #22 Common carp reference MODERN SPECIES 4 ENSCCRG00000063509 KCTD3 (ENSCCRG00000051349) ptpreb (ENSCCRG00000048836) tecpr2 (ENSCCRG00000056629) rcor1 (ENSCCRG00000012603) traf3 (ENSCCRG00000012605) ehd4 (ENSCCRG00000074709) foxg1a (ENSCCRG00000052818) #16 PRKD1 (ENSCCRG00000037783) #17 g2e3 (ENSCCRG00000015681) #18 scfd1 (ENSCCRG00000049308) #19 opn6b (ENSCCRG00000049622) coch (ENSCCRG00000049638) #20 strn3 (ENSCCRG00000015878) ##21 ENSCCRG00000061159 ap4s1 (ENSCCRG00000003762) #22 hectd1 (ENSCCRG00000079062) #23 HEATR5A (ENSCCRG00000045375) #24 mis18bp1 (ENSCCRG00000045330) ENSCCRG00000061330 ENSCCRG00000076684 htr1d (ENSCCRG00000059245) tmem30b (ENSCCRG00000068518) kdm1a (ENSCCRG00000014292) ENSCCRG00000074736 ENSCCRG00000066949 qkia (ENSCCRG00000052783) pacrg (ENSCCRG00000063874) ctsl.1 (ENSCCRG00000054639) vgll2b (ENSCCRG00000040846) ythdf2 (ENSCCRG00000043168) Zebrafish MODERN SPECIES 8 ptpreb (ENSDARG00000021151) tecpr2 (ENSDARG00000060835) ankrd9 (ENSDARG00000028804) rcor1 (ENSDARG00000031434) traf3 (ENSDARG00000022000) ENSDARG00000090708 ehd4 (ENSDARG00000054302) ENSDARG00000097683 foxg1a (ENSDARG00000070769) #16 PRKD1 (ENSDARG00000075949) #17 g2e3 (ENSDARG00000001313) #18 scfd1 (ENSDARG00000000779) #19 opn6b (ENSDARG00000098051) coch (ENSDARG00000024032) #20 strn3 (ENSDARG00000001729) ##21 ap4s1 (ENSDARG00000054220) #22 hectd1 (ENSDARG00000054213) #23 HEATR5A (ENSDARG00000023999) #24 mis18bp1 (ENSDARG00000042563) ENSDARG00000054128 MDGA2 (ENSDARG00000024017) htr1d (ENSDARG00000054124) tmem30b (ENSDARG00000054122) kdm1a (ENSDARG00000060679) ENSDARG00000114351 LUZP1 (ENSDARG00000075556) PTAFR (ENSDARG00000042370) qkia (ENSDARG00000097478) pacrg (ENSDARG00000087556) ctsl.1 (ENSDARG00000003902) vgll2b (ENSDARG00000053773) Clupeiformes ANCESTRAL SPECIES 128 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.b #25 ENSGT00390000014679.d.a ENSGT00940000159201 ENSGT00940000164449 ENSGT00940000163117 ENSGT00940000164613 ENSGT00940000158908 ENSGT00950000182843.a.a.a.a ENSGT00940000158622 ENSGT00410000026259 ENSGT00390000003866.a.b.a ENSGT00910000145250 ENSGT00390000016904 Denticle herring MODERN SPECIES ENSDCDG00000000023 ENSDCDG00000000024 cinp (ENSDCDG00000000025) ENSDCDG00000000026 tecpr2 (ENSDCDG00000000027) ehd4 (ENSDCDG00000000028) foxg1a (ENSDCDG00000000030) #16 ENSDCDG00000000032 PRKD1 (ENSDCDG00000000033) #17 ENSDCDG00000000034 g2e3 (ENSDCDG00000000035) #18 scfd1 (ENSDCDG00000000036) #19 opn6b (ENSDCDG00000000037) coch (ENSDCDG00000000038) #20 strn3 (ENSDCDG00000000039) ##21 ap4s1 (ENSDCDG00000000040) #22 hectd1 (ENSDCDG00000000041) #23 HEATR5A (ENSDCDG00000000042) #24 DTD2 (ENSDCDG00000000043) #25 ENSDCDG00000000044 ENSDCDG00000000045 ENSDCDG00000000046 zfand3 (ENSDCDG00000000047) ENSDCDG00000000048 MDGA1 (ENSDCDG00000000049) ENSDCDG00000000050 ENSDCDG00000000051 or64a1 (ENSDCDG00000000052) ENSDCDG00000000053 ENSDCDG00000000054 ENSDCDG00000000055 Euteleosteomorpha ANCESTRAL SPECIES 110 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00940000166431 ENSGT00390000012799 Protacanthopterygii ANCESTRAL SPECIES 22 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B.h #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B.a #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00550000074824 Salmoninae ANCESTRAL SPECIES 125 ENSGT00390000015784.p ENSGT00390000002751.i ENSGT00940000157283.e ENSGT00390000018116.c ENSGT00940000155654.w ENSGT00940000163836.b.d ENSGT00940000158601.h ENSGT00940000161549.a.a ENSGT00940000167604 ENSGT00950000183024.a.b.a.i #17 ENSGT00950000182865.b.a.a.a #18 ENSGT00550000074845.c #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a.d ##21 ENSGT00970000193421.B #22 ENSGT00940000156572.e #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a.b #25 ENSGT00950000183193.B.h #27 ENSGT00940000154553.a.b.q #28 ENSGT00810000125473.B.a.a #29 ENSGT00940000158051.e #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.cb #33 ENSGT00940000154940.k.a #34 ENSGT00950000183000.c.b.j #35 ENSGT00940000158135.d #36 ENSGT00390000012799.i ENSGT00550000074824.s Salmoninae_a ANCESTRAL SPECIES 8 ENSGT01000000220557 ENSGT00390000002751.i ENSGT00940000157283.e ENSGT00390000018116.c ENSGT00940000155654.w ENSGT00940000163836.b.d ENSGT00940000158601.h ENSGT00940000161549.a.a ENSGT00940000167604 ENSGT00950000183024.a.b.a.i #17 ENSGT00950000182865.b.a.a.a #18 ENSGT00550000074845.c #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a.d ##21 ENSGT00970000193421.B #22 ENSGT00940000156572.e #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a.b #25 ENSGT00950000183193.B.h #27 ENSGT00940000154553.a.b.q #28 ENSGT00810000125473.B.a.a #29 ENSGT00940000158051.e #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332.cb #33 ENSGT00940000154940.k.a #34 ENSGT00950000183000.c.b.j #35 ENSGT00940000158135.d #36 ENSGT00390000012799.i ENSGT00550000074824.s Salmo ANCESTRAL SPECIES 8 ENSGT01000000220557 ENSGT00390000002751.i ENSGT00940000157283.e ENSGT00390000018116.c ENSGT00940000155654.w ENSGT00940000163836.b.d ENSGT00940000158601.h ENSGT00940000161549.a.a ENSGT00940000167604 ENSGT00950000183024.a.b.a.i #17 ENSGT00950000182865.b.a.a.a #18 ENSGT00550000074845.c #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a.d ##21 ENSGT00970000193421.B #22 ENSGT00940000156572.e #23 ENSGT00390000006205.b.u #24 ENSGT00940000153431.a.v.a.b #25 ENSGT00950000183193.B.h.a #27 ENSGT00940000154553.a.b.q #28 ENSGT00810000125473.B.a.a #29 ENSGT00940000158051.e #30 ENSGT00940000167277 ENSGT00390000001332.bb #33 ENSGT00940000154940.k.b #34 ENSGT00950000183000.c.b.i #35 ENSGT00940000158135.c #36 ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00390000006916.d.b.a River trout MODERN SPECIES 26 ENSSTUG00000024531 tecpr2 (ENSSTUG00000024493) ankrd9 (ENSSTUG00000024472) rcor1 (ENSSTUG00000024431) traf3 (ENSSTUG00000024386) ehd4 (ENSSTUG00000024369) SPTBN5 (ENSSTUG00000024338) ENSSTUG00000024324 ENSSTUG00000024321 PRKD1 (ENSSTUG00000023501) #17 g2e3 (ENSSTUG00000023417) #18 scfd1 (ENSSTUG00000022919) #19 opn6b (ENSSTUG00000022884) coch (ENSSTUG00000022865) #20 strn3 (ENSSTUG00000022743) ##21 ap4s1 (ENSSTUG00000022727) #22 hectd1 (ENSSTUG00000022570) #23 HEATR5A (ENSSTUG00000022095) #24 dtd2 (ENSSTUG00000022064) #25 nubpl (ENSSTUG00000021955) #27 ARHGAP5 (ENSSTUG00000021943) #28 AKAP6 (ENSSTUG00000021906) #29 ENSSTUG00000021899 NPAS3 (ENSSTUG00000021327) #30 egln3 (ENSSTUG00000021301) #31 ENSSTUG00000021292 eapp (ENSSTUG00000051050) #33 snx6 (ENSSTUG00000051009) #34 cfl2 (ENSSTUG00000051005) #35 BAZ1A (ENSSTUG00000051004) #36 zgc:109986 (ENSSTUG00000051002) Atlantic salmon MODERN SPECIES ENSSSAG00000065859 ENSSSAG00000065866 ENSSSAG00000065864 tecpr2 (ENSSSAG00000065872) ankrd9 (ENSSSAG00000083291) rcor1 (ENSSSAG00000112622) ehd4 (ENSSSAG00000108761) ENSSSAG00000065930 ENSSSAG00000116615 PRKD1 (ENSSSAG00000066101) #17 g2e3 (ENSSSAG00000071501) #18 scfd1 (ENSSSAG00000071642) #19 opn6b (ENSSSAG00000071695) coch (ENSSSAG00000071720) #20 strn3 (ENSSSAG00000071739) ##21 ap4s1 (ENSSSAG00000094718) #22 hectd1 (ENSSSAG00000072645) #23 HEATR5A (ENSSSAG00000072849) #24 dtd2 (ENSSSAG00000076941) #25 NUBPL (ENSSSAG00000076831) #27 ENSSSAG00000120473 arhgap5 (ENSSSAG00000076945) #28 AKAP6 (ENSSSAG00000076953) #29 NPAS3 (ENSSSAG00000076969) #30 egln3 (ENSSSAG00000076988) #31 eapp (ENSSSAG00000076989) #33 snx6 (ENSSSAG00000077003) #34 cfl2 (ENSSSAG00000119678) #35 BAZ1A (ENSSSAG00000077671) #36 SRP54 (ENSSSAG00000077694) ENSSSAG00000118940 Oncorhynchus ANCESTRAL SPECIES 6 ENSGT01000000220557 ENSGT00390000002751.i ENSGT00940000157283.e ENSGT00390000018116.c ENSGT00940000155654.w ENSGT00940000163836.b.d ENSGT00940000158601.h ENSGT00940000161549.a.a ENSGT00940000167604 ENSGT00950000183024.a.b.a.i #17 ENSGT00950000182865.b.a.a.a #18 ENSGT00550000074845.c #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a.d ##21 ENSGT00970000193421.B #22 ENSGT00940000156572.e #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a.b #25 ENSGT00950000183193.B.h #27 ENSGT00940000154553.a.b.q #28 ENSGT00810000125473.B.a.a #29 ENSGT00940000158051.e #30 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332.bb #33 ENSGT00940000154940.k.b #34 ENSGT00950000183000.c.b.i #35 ENSGT00940000158135.c #36 ENSGT00390000012799.j ENSGT00550000074824.t Oncorhynchus_a ANCESTRAL SPECIES 10 ENSGT01000000220557 ENSGT00390000002751.i ENSGT00940000157283.e ENSGT00390000018116.c ENSGT00940000155654.w ENSGT00940000163836.b.d ENSGT00940000158601.h ENSGT00940000161549.a.a ENSGT00940000167604 ENSGT00950000183024.a.b.a.i #17 ENSGT00950000182865.b.a.a.a #18 ENSGT00550000074845.c #19 ENSGT01100000263524.G.e ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a.d ##21 ENSGT00970000193421.B #22 ENSGT00940000156572.e #23 ENSGT00390000006205.b #24 ENSGT00940000153431.a.v.a.b #25 ENSGT00950000183193.B.h #27 ENSGT00940000154553.a.b.q #28 ENSGT00810000125473.B.a.a #29 ENSGT00940000158051.e #30 ENSGT00940000158745 #31 ENSGT00940000167277 ENSGT00390000001332.bb #33 ENSGT00940000154940.k.b #34 ENSGT00950000183000.c.b.i #35 ENSGT00940000158135.c #36 ENSGT00390000012799.j ENSGT00550000074824.t Chinook salmon MODERN SPECIES 2895 ENSOTSG00005046401 tecpr2 (ENSOTSG00005046403) ankrd9 (ENSOTSG00005046405) rcor1 (ENSOTSG00005046406) traf3 (ENSOTSG00005046408) ehd4 (ENSOTSG00005046411) SPTBN5 (ENSOTSG00005046416) ENSOTSG00005046420 PRKD1 (ENSOTSG00005046422) #17 g2e3 (ENSOTSG00005046449) #18 ENSOTSG00005046450 #18 scfd1 (ENSOTSG00005046451) #19 opn6b (ENSOTSG00005046462) coch (ENSOTSG00005046464) #20 strn3 (ENSOTSG00005046515) ##21 ap4s1 (ENSOTSG00005046536) #22 hectd1 (ENSOTSG00005046537) #23 HEATR5A (ENSOTSG00005046560) #24 dtd2 (ENSOTSG00005047667) #25 nubpl (ENSOTSG00005047668) #27 ARHGAP5 (ENSOTSG00005047677) #28 AKAP6 (ENSOTSG00005047685) #29 ENSOTSG00005047690 Coho salmon MODERN SPECIES 27 ENSOKIG00005015487 ENSOKIG00005015478 tecpr2 (ENSOKIG00005015437) ankrd9 (ENSOKIG00005015430) rcor1 (ENSOKIG00005015403) traf3 (ENSOKIG00005015369) ehd4 (ENSOKIG00005015357) SPTBN5 (ENSOKIG00005015182) ENSOKIG00005015169 PRKD1 (ENSOKIG00005013388) #17 g2e3 (ENSOKIG00005013265) #18 scfd1 (ENSOKIG00005013130) #19 opn6b (ENSOKIG00005013084) coch (ENSOKIG00005012823) #20 strn3 (ENSOKIG00005010765) ##21 ap4s1 (ENSOKIG00005010660) #22 hectd1 (ENSOKIG00005010612) #23 HEATR5A (ENSOKIG00005010129) #24 dtd2 (ENSOKIG00005010002) #25 nubpl (ENSOKIG00005009896) #27 ARHGAP5 (ENSOKIG00005009866) #28 ENSOKIG00005009846 #29 NPAS3 (ENSOKIG00005009455) #30 egln3 (ENSOKIG00005009425) #31 ENSOKIG00005009419 eapp (ENSOKIG00005009407) #33 snx6 (ENSOKIG00005008760) #34 cfl2 (ENSOKIG00005008698) #35 BAZ1A (ENSOKIG00005008685) #36 zgc:109986 (ENSOKIG00005008601) srp54 (ENSOKIG00005008527) Rainbow trout MODERN SPECIES 10 ENSOMYG00000069940 tecpr2 (ENSOMYG00000038473) ankrd9 (ENSOMYG00000038432) rcor1 (ENSOMYG00000038409) traf3 (ENSOMYG00000038356) ehd4 (ENSOMYG00000038344) ENSOMYG00000038323 ENSOMYG00000038304 PRKD1 (ENSOMYG00000037116) #17 g2e3 (ENSOMYG00000036928) #18 ENSOMYG00000059713 scfd1 (ENSOMYG00000036822) #19 opn6b (ENSOMYG00000036731) coch (ENSOMYG00000036724) #20 strn3 (ENSOMYG00000036019) ##21 ap4s1 (ENSOMYG00000035925) #22 hectd1 (ENSOMYG00000035713) #23 HEATR5A (ENSOMYG00000035291) #24 dtd2 (ENSOMYG00000035093) #25 NUBPL (ENSOMYG00000035080) #27 ARHGAP5 (ENSOMYG00000035067) #28 AKAP6 (ENSOMYG00000038985) #29 NPAS3 (ENSOMYG00000038938) #30 egln3 (ENSOMYG00000038907) #31 ENSOMYG00000038878 eapp (ENSOMYG00000038851) #33 snx6 (ENSOMYG00000037313) #34 cfl2 (ENSOMYG00000037113) #35 ENSOMYG00000037104 SRP54 (ENSOMYG00000037073) ENSOMYG00000019205 Huchen MODERN SPECIES 195 ENSHHUG00000027099 ENSHHUG00000027086 ENSHHUG00000027063 ENSHHUG00000027062 PRKD1 (ENSHHUG00000026745) #17 g2e3 (ENSHHUG00000026721) #18 scfd1 (ENSHHUG00000026674) #19 opn6b (ENSHHUG00000026663) strn3 (ENSHHUG00000026639) ##21 ap4s1 (ENSHHUG00000026630) #22 hectd1 (ENSHHUG00000026608) #23 HEATR5A (ENSHHUG00000026563) #24 dtd2 (ENSHHUG00000026549) #25 nubpl (ENSHHUG00000026460) #27 ARHGAP5 (ENSHHUG00000026454) #28 ENSHHUG00000026450 #29 ENSHHUG00000026444 #29 NPAS3 (ENSHHUG00000026414) #30 egln3 (ENSHHUG00000026409) #31 ENSHHUG00000026406 eapp (ENSHHUG00000026393) #33 snx6 (ENSHHUG00000026024) #34 cfl2 (ENSHHUG00000026014) #35 BAZ1A (ENSHHUG00000026005) #36 zgc:109986 (ENSHHUG00000025995) Northern pike MODERN SPECIES 14 ENSELUG00000004470 tecpr2 (ENSELUG00000004453) ankrd9 (ENSELUG00000004434) rcor1 (ENSELUG00000004430) traf3 (ENSELUG00000004411) ehd4 (ENSELUG00000004390) ENSELUG00000004347 ENSELUG00000004283 foxg1a (ENSELUG00000004275) #16 PRKD1 (ENSELUG00000004243) #17 g2e3 (ENSELUG00000004136) #18 scfd1 (ENSELUG00000004003) #19 opn6b (ENSELUG00000003930) coch (ENSELUG00000003893) #20 strn3 (ENSELUG00000003868) ##21 ap4s1 (ENSELUG00000003800) #22 hectd1 (ENSELUG00000003779) #23 HEATR5A (ENSELUG00000003720) #24 dtd2 (ENSELUG00000032184) #25 nubpl (ENSELUG00000003661) #27 ARHGAP5 (ENSELUG00000003636) #28 ENSELUG00000032036 AKAP6 (ENSELUG00000003612) #29 NPAS3 (ENSELUG00000003567) #30 egln3 (ENSELUG00000003505) #31 sptssa (ENSELUG00000003498) #32 eapp (ENSELUG00000003487) #33 snx6 (ENSELUG00000003469) #34 cfl2 (ENSELUG00000003457) #35 BAZ1A (ENSELUG00000003446) #36 zgc:109986 (ENSELUG00000003420) Acanthomorphata ANCESTRAL SPECIES 117 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b #24 ENSGT00940000156572 #23 ENSGT01060000249637 ENSGT00950000183095.a.b.a.a ##21 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00970000193421.B #22 ENSGT00940000153431.a.v.b #25 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 Euacanthomorphacea ANCESTRAL SPECIES 52 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b #24 ENSGT00940000156572 #23 ENSGT01060000249637 ENSGT00950000183095.a.b.a.a ##21 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00970000193421.B #22 ENSGT00940000153431.a.v.b #25 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 Pinecone sodierfish MODERN SPECIES 26 strn3 (ENSMMDG00005008810) ##21 ap4s1 (ENSMMDG00005008813) #22 Percomorphaceae ANCESTRAL SPECIES 51 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b #24 ENSGT00940000156572 #23 ENSGT01060000249637 ENSGT00950000183095.a.b.a.a ##21 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00970000193421.B #22 ENSGT00940000153431.a.v.b #25 ENSGT00940000153431.a.v.a #25 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00390000011854 ENSGT00940000159561.m Tiger tail seahorse MODERN SPECIES 43 SYT16 (ENSHCOG00000020828) ENSHCOG00000020841 ARHGAP5 (ENSHCOG00000020862) #28 AKAP6 (ENSHCOG00000020979) #29 NPAS3 (ENSHCOG00000021038) #30 sptssa (ENSHCOG00000021055) #32 eapp (ENSHCOG00000021078) #33 ENSHCOG00000021223 #17 foxg1a (ENSHCOG00000021221) #16 ehd4 (ENSHCOG00000021219) g2e3 (ENSHCOG00000021216) #18 scfd1 (ENSHCOG00000021210) #19 coch (ENSHCOG00000021205) #20 ENSHCOG00000021203 ##21 strn3 (ENSHCOG00000021201) ##21 ap4s1 (ENSHCOG00000021199) #22 ENSHCOG00000021198 #23 ENSHCOG00000021196 #23 ENSHCOG00000021195 ENSHCOG00000021193 #23 hikeshi (ENSHCOG00000021191) hikeshi (ENSHCOG00000021190) ENSHCOG00000021188 ENSHCOG00000021186 ENSHCOG00000021183 zgc:109986 (ENSHCOG00000021181) BAZ1A (ENSHCOG00000021177) #36 cfl2 (ENSHCOG00000021173) #35 ENSHCOG00000021171 ##35 snx6 (ENSHCOG00000021168) #34 psma3 (ENSHCOG00000021162) Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d Ovalentaria ANCESTRAL SPECIES 10 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 Atherinomorphae ANCESTRAL SPECIES 39 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000155369.A.d.a Oryzias ANCESTRAL SPECIES 3 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000153168.C.a.b ENSGT00940000160181.i ENSGT00940000158993 ENSGT00390000004599 ENSGT00390000008624 ENSGT00940000158221 ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000154482.b.b.b.p ENSGT00940000153577.B ENSGT00940000161060 Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000153168.C.a.b ENSGT00940000160181.i ENSGT00940000158993 ENSGT00390000004599 ENSGT00390000008624 ENSGT00940000158221 ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000154482.b.b.b.p ENSGT00940000153577.B ENSGT00940000161060 Chinese medaka MODERN SPECIES 631 fbxo34 (ENSOSIG00000018122) lgals3b (ENSOSIG00000018121) DACT1 (ENSOSIG00000018120) irf2bpl (ENSOSIG00000018078) timm9 (ENSOSIG00000018069) ENSOSIG00000018060 psma3 (ENSOSIG00000018012) snx6 (ENSOSIG00000017956) #34 cfl2 (ENSOSIG00000017937) #35 zgc:109986 (ENSOSIG00000017928) ENSOSIG00000017806 ehd4 (ENSOSIG00000017520) g2e3 (ENSOSIG00000017364) #18 coch (ENSOSIG00000017074) #20 strn3 (ENSOSIG00000013379) ##21 ap4s1 (ENSOSIG00000013343) #22 ENSOSIG00000013288 #23 hikeshi (ENSOSIG00000013285) PRKD1 (ENSOSIG00000012200) #17 foxg1a (ENSOSIG00000012189) #16 zgc:123321 (ENSOSIG00000012188) osr1 (ENSOSIG00000012187) alkbh1 (ENSOSIG00000012185) slirp (ENSOSIG00000012183) adck1 (ENSOSIG00000012077) ENSOSIG00000012073 nrxn3a (ENSOSIG00000011783) dio2 (ENSOSIG00000011773) dio2 (ENSOSIG00000011771) BCL11B (ENSOSIG00000011749) vrk1 (ENSOSIG00000011152) Japanese Medaka HdrR MODERN SPECIES 14 ENSORLG00000021949 ENSORLG00000027454 ENSORLG00000010245 psma3 (ENSORLG00000010288) snx6 (ENSORLG00000010318) #34 cfl2 (ENSORLG00000010332) #35 BAZ1A (ENSORLG00000010374) #36 zgc:109986 (ENSORLG00000010399) ENSORLG00000010405 ehd4 (ENSORLG00000010433) g2e3 (ENSORLG00000010482) #18 scfd1 (ENSORLG00000010536) #19 ENSORLG00000022055 coch (ENSORLG00000010591) #20 strn3 (ENSORLG00000010638) ##21 ap4s1 (ENSORLG00000010658) #22 hectd1 (ENSORLG00000010702) #23 hikeshi (ENSORLG00000010707) ENSORLG00000023329 ENSORLG00000027976 ENSORLG00000010716 #17 foxg1a (ENSORLG00000010723) #16 zgc:123321 (ENSORLG00000029255) ENSORLG00000029926 ENSORLG00000027646 ENSORLG00000028933 osr1 (ENSORLG00000010734) alkbh1 (ENSORLG00000010750) slirp (ENSORLG00000010761) adck1 (ENSORLG00000010777) nrxn3a (ENSORLG00000010813) Oryzias_b ANCESTRAL SPECIES 12 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000153168.C.a.b ENSGT00940000160181.i ENSGT00940000158993 ENSGT00390000004599 ENSGT00390000008624 ENSGT00940000158221 ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000154482.b.b.b.p ENSGT00940000153577.B ENSGT00940000161060 Indian medaka MODERN SPECIES ENSOMEG00000019966 psma3 (ENSOMEG00000019957) snx6 (ENSOMEG00000019916) #34 cfl2 (ENSOMEG00000019883) #35 BAZ1A (ENSOMEG00000019851) #36 zgc:109986 (ENSOMEG00000019806) ENSOMEG00000019786 slc3a2b (ENSOMEG00000019772) ehd4 (ENSOMEG00000019758) g2e3 (ENSOMEG00000019733) #18 scfd1 (ENSOMEG00000019697) #19 ENSOMEG00000000520 ENSOMEG00000000656 coch (ENSOMEG00000019601) #20 strn3 (ENSOMEG00000019588) ##21 ap4s1 (ENSOMEG00000019544) #22 ENSOMEG00000019532 #23 ENSOMEG00000019526 #23 PRKD1 (ENSOMEG00000019479) #17 foxg1a (ENSOMEG00000019381) #16 zgc:123321 (ENSOMEG00000019377) rdh14a (ENSOMEG00000019363) osr1 (ENSOMEG00000019345) alkbh1 (ENSOMEG00000019337) slirp (ENSOMEG00000019321) adck1 (ENSOMEG00000019290) nrxn3a (ENSOMEG00000019245) dio2 (ENSOMEG00000019199) setd3 (ENSOMEG00000019180) BCL11B (ENSOMEG00000019117) vrk1 (ENSOMEG00000019079) Javanese ricefish MODERN SPECIES 14 lgals3b (ENSOJAG00000017991) ENSOJAG00000017941 ENSOJAG00000017930 ENSOJAG00000017907 arid4a (ENSOJAG00000017865) psma3 (ENSOJAG00000017765) snx6 (ENSOJAG00000017479) #34 cfl2 (ENSOJAG00000017459) #35 zgc:109986 (ENSOJAG00000017424) ENSOJAG00000017419 ehd4 (ENSOJAG00000017357) g2e3 (ENSOJAG00000017345) #18 scfd1 (ENSOJAG00000016699) #19 coch (ENSOJAG00000016617) #20 strn3 (ENSOJAG00000015993) ##21 ap4s1 (ENSOJAG00000015956) #22 ENSOJAG00000015909 #23 hikeshi (ENSOJAG00000015904) PRKD1 (ENSOJAG00000015216) #17 foxg1a (ENSOJAG00000015190) #16 YIPF7 (ENSOJAG00000015184) rdh14a (ENSOJAG00000015180) numb (ENSOJAG00000015133) exd2 (ENSOJAG00000015074) COQ8A (ENSOJAG00000014975) TATDN3 (ENSOJAG00000014917) fuca2 (ENSOJAG00000014879) ENSOJAG00000014800 txlnbb (ENSOJAG00000014744) dusp23a (ENSOJAG00000014725) gng2 (ENSOJAG00000014696) Cyprinodontiformes ANCESTRAL SPECIES 40 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000155369.A.d.a Cyprinodontoidei ANCESTRAL SPECIES 51 ENSGT00950000183181.B.a ENSGT00940000162596 ENSGT00390000012397 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00390000001332 #33 ENSGT00390000002766.b.b #32 ENSGT00940000158745 #31 ENSGT00940000158051 #30 ENSGT00810000125473.B #29 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00390000001332 #33 ENSGT00390000002766.b.b #32 ENSGT00940000158745 #31 ENSGT00940000158051 #30 ENSGT00810000125473.B #29 ENSGT00390000018691.c ENSGT01030000234620.a.b.a ENSGT00940000158836.a.a Poecilia ANCESTRAL SPECIES 57 ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00390000001332 #33 ENSGT00390000002766.b.b #32 ENSGT00940000158745 #31 ENSGT00940000158051 #30 ENSGT00810000125473.B #29 ENSGT00390000018691.c ENSGT01030000234620.a.b.a ENSGT00940000158836.a.a NAME_6 ANCESTRAL SPECIES 163 ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a #16 ENSGT00950000183024.a.b.a #17 ENSGT00390000001332 #33 ENSGT00390000002766.b.b #32 ENSGT00940000158745 #31 ENSGT00940000158051 #30 ENSGT00810000125473.B #29 ENSGT01030000234620.a.b.a ENSGT00940000158836.a.a ENSGT00940000164854.a Amazon molly MODERN SPECIES 718 dkc1 (ENSPFOG00000018653) dact1 (ENSPFOG00000023754) ENSPFOG00000023947 timm9 (ENSPFOG00000018642) arid4a (ENSPFOG00000018637) psma3 (ENSPFOG00000018619) snx6 (ENSPFOG00000018600) #34 cfl2 (ENSPFOG00000018584) #35 BAZ1A (ENSPFOG00000018550) #36 zgc:109986 (ENSPFOG00000018534) slc3a2b (ENSPFOG00000018522) ehd4 (ENSPFOG00000018511) g2e3 (ENSPFOG00000018499) #18 scfd1 (ENSPFOG00000018476) #19 strn3 (ENSPFOG00000018432) ##21 ap4s1 (ENSPFOG00000018416) #22 hectd1 (ENSPFOG00000018359) #23 lgals3b (ENSPFOG00000018342) Sailfin molly MODERN SPECIES 372 dkc1 (ENSPLAG00000003272) irf2bpl (ENSPLAG00000003320) ENSPLAG00000003381 timm9 (ENSPLAG00000003410) arid4a (ENSPLAG00000003432) psma3 (ENSPLAG00000003463) snx6 (ENSPLAG00000003489) #34 cfl2 (ENSPLAG00000003498) #35 BAZ1A (ENSPLAG00000003514) #36 zgc:109986 (ENSPLAG00000003536) slc3a2b (ENSPLAG00000003555) ehd4 (ENSPLAG00000003565) g2e3 (ENSPLAG00000000532) #18 scfd1 (ENSPLAG00000003632) #19 strn3 (ENSPLAG00000003667) ##21 ap4s1 (ENSPLAG00000003677) #22 hectd1 (ENSPLAG00000003762) #23 hikeshi (ENSPLAG00000003779) lgals3b (ENSPLAG00000003808) Guppy MODERN SPECIES 453 ENSPREG00000004074 timm9 (ENSPREG00000004051) ENSPREG00000003986 ENSPREG00000003879 psma3 (ENSPREG00000003841) snx6 (ENSPREG00000003810) #34 cfl2 (ENSPREG00000003752) #35 BAZ1A (ENSPREG00000003601) #36 zgc:109986 (ENSPREG00000003548) slc3a2b (ENSPREG00000003533) ehd4 (ENSPREG00000003513) g2e3 (ENSPREG00000003497) #18 ENSPREG00000003478 scfd1 (ENSPREG00000003386) #19 strn3 (ENSPREG00000003359) ##21 ap4s1 (ENSPREG00000003331) #22 hectd1 (ENSPREG00000003161) #23 hikeshi (ENSPREG00000003130) ENSPREG00000003117 jmjd7 (ENSPREG00000003079) foxg1a (ENSPREG00000003063) #16 ENSPREG00000003042 PRKD1 (ENSPREG00000003011) #17 eapp (ENSPREG00000002981) #33 sptssa (ENSPREG00000002968) #32 egln3 (ENSPREG00000002945) #31 NPAS3 (ENSPREG00000002851) #30 AKAP6 (ENSPREG00000002776) #29 snapc1b (ENSPREG00000002744) ppp2r5eb (ENSPREG00000002688) SGPP1 (ENSPREG00000002668) Platyfish MODERN SPECIES 10 DACT1 (ENSXMAG00000004918) irf2bpl (ENSXMAG00000021096) ENSXMAG00000004916 timm9 (ENSXMAG00000029156) arid4a (ENSXMAG00000004904) psma3 (ENSXMAG00000004893) snx6 (ENSXMAG00000004865) #34 cfl2 (ENSXMAG00000028653) #35 BAZ1A (ENSXMAG00000004820) #36 zgc:109986 (ENSXMAG00000022689) slc3a2b (ENSXMAG00000004796) ehd4 (ENSXMAG00000021228) g2e3 (ENSXMAG00000021115) #18 scfd1 (ENSXMAG00000029757) #19 strn3 (ENSXMAG00000009308) ##21 ap4s1 (ENSXMAG00000024600) #22 hectd1 (ENSXMAG00000009354) #23 lgals3b (ENSXMAG00000014963) fbxo34 (ENSXMAG00000025098) jmjd7 (ENSXMAG00000014939) foxg1a (ENSXMAG00000024501) #16 PRKD1 (ENSXMAG00000001499) #17 eapp (ENSXMAG00000028528) #33 ENSXMAG00000021280 egln3 (ENSXMAG00000000068) #31 NPAS3 (ENSXMAG00000000074) #30 AKAP6 (ENSXMAG00000017748) #29 snapc1b (ENSXMAG00000017760) ppp2r5eb (ENSXMAG00000021713) ENSXMAG00000004941 ENSXMAG00000000634 NAME_4 ANCESTRAL SPECIES 124 ENSGT00510000047092 ENSGT00950000183181.B.a ENSGT00940000162596 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a #16 Mummichog MODERN SPECIES 2434 ENSFHEG00000004578 dkc1 (ENSFHEG00000004627) dact1 (ENSFHEG00000004639) irf2bpl (ENSFHEG00000004684) timm9 (ENSFHEG00000004703) arid4a (ENSFHEG00000004741) psma3 (ENSFHEG00000004782) snx6 (ENSFHEG00000004824) #34 cfl2 (ENSFHEG00000004854) #35 BAZ1A (ENSFHEG00000004873) #36 zgc:109986 (ENSFHEG00000004880) slc3a2b (ENSFHEG00000004886) ehd4 (ENSFHEG00000004908) ENSFHEG00000004922 #19 strn3 (ENSFHEG00000004993) ##21 ap4s1 (ENSFHEG00000005021) #22 hectd1 (ENSFHEG00000005109) #23 hikeshi (ENSFHEG00000005130) hikeshi (ENSFHEG00000005142) lgals3b (ENSFHEG00000005165) fbxo34 (ENSFHEG00000005190) jmjd7 (ENSFHEG00000005212) foxg1a (ENSFHEG00000005233) #16 Aplocheiloidei ANCESTRAL SPECIES 107 ENSGT00390000012397 ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 ENSGT00940000158135 #36 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000155369.A.d.a Mangrove rivulus MODERN SPECIES 614 ENSKMAG00000008965 g2e3 (ENSKMAG00000008931) #18 scfd1 (ENSKMAG00000008868) #19 ENSKMAG00000008846 coch (ENSKMAG00000008818) #20 strn3 (ENSKMAG00000008791) ##21 ap4s1 (ENSKMAG00000008756) #22 hectd1 (ENSKMAG00000008636) #23 hikeshi (ENSKMAG00000008610) ENSKMAG00000008532 Ovalentaria_B ANCESTRAL SPECIES 24 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 Pomacentridae ANCESTRAL SPECIES 78 ENSGT00940000158051.h #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 Bicolor damselfish MODERN SPECIES 325 foxg1a (ENSSPAG00000005592) #16 ENSSPAG00000005529 ENSSPAG00000005512 ehd4 (ENSSPAG00000005490) g2e3 (ENSSPAG00000005396) #18 scfd1 (ENSSPAG00000005313) #19 coch (ENSSPAG00000005245) #20 strn3 (ENSSPAG00000005208) ##21 ap4s1 (ENSSPAG00000005192) #22 hectd1 (ENSSPAG00000005095) #23 HEATR5A (ENSSPAG00000004991) #24 dhrs13a.1 (ENSSPAG00000004932) dhrs13a.2 (ENSSPAG00000004890) ENSSPAG00000004851 slc3a2b (ENSSPAG00000004822) zgc:109986 (ENSSPAG00000004813) BAZ1A (ENSSPAG00000004699) #36 cfl2 (ENSSPAG00000004688) #35 snx6 (ENSSPAG00000004652) #34 psma3 (ENSSPAG00000004606) arid4a (ENSSPAG00000004467) timm9 (ENSSPAG00000004448) irf2bpl (ENSSPAG00000004425) dact1 (ENSSPAG00000004415) Pomacentridae_A ANCESTRAL SPECIES 93 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b.a ENSGT00940000155599.i.a.b.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 Spiny chromis MODERN SPECIES 2383 strn3 (ENSAPOG00000006439) ##21 ap4s1 (ENSAPOG00000001033) #22 hectd1 (ENSAPOG00000006638) #23 Amphiprion ANCESTRAL SPECIES 181 ENSGT00940000159386 #20 ENSGT00940000178078 ENSGT00550000074845 #19 ENSGT00950000182865.b.a.a #18 ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00950000183024.a.b.a #17 ENSGT00390000001332 #33 ENSGT00390000002766.b.b #32 ENSGT00940000158745.p #31 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b.a ENSGT00940000155599.i.a.b.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 Clown anemonefish MODERN SPECIES 1211 ENSAOCG00000010474 strn3 (ENSAOCG00000010456) ##21 ENSAOCG00000010436 ap4s1 (ENSAOCG00000010426) #22 Orange clownfish MODERN SPECIES 9 ENSAPEG00000013604 foxg1a (ENSAPEG00000013581) #16 ENSAPEG00000013566 ENSAPEG00000013439 ENSAPEG00000013375 ENSAPEG00000013356 ehd4 (ENSAPEG00000013326) g2e3 (ENSAPEG00000013279) #18 scfd1 (ENSAPEG00000013158) #19 ENSAPEG00000013135 coch (ENSAPEG00000013099) #20 eapp (ENSAPEG00000013072) #33 ENSAPEG00000013061 sptssa (ENSAPEG00000013049) #32 strn3 (ENSAPEG00000012987) ##21 ap4s1 (ENSAPEG00000012966) #22 hectd1 (ENSAPEG00000012851) #23 HEATR5A (ENSAPEG00000012740) #24 hikeshi (ENSAPEG00000012684) DHRS13 (ENSAPEG00000012661) dhrs13a.1 (ENSAPEG00000012638) ENSAPEG00000012622 ENSAPEG00000012613 dhrs13a.2 (ENSAPEG00000012591) MDGA2 (ENSAPEG00000012549) ENSAPEG00000012525 ENSAPEG00000012506 slc3a2b (ENSAPEG00000012493) zgc:109986 (ENSAPEG00000012482) BAZ1A (ENSAPEG00000012434) #36 cfl2 (ENSAPEG00000012418) #35 Cichlidae ANCESTRAL SPECIES 37 ENSGT00940000154553.a.b #28 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00390000015102.a.b ENSGT00940000155554 ENSGT00940000161060 ENSGT00940000153577.B ENSGT00940000154482.b.b.b ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 Midas cichlid MODERN SPECIES 272 ENSACIG00000011838 #19 scfd1 (ENSACIG00000011848) #19 coch (ENSACIG00000011889) #20 strn3 (ENSACIG00000011917) ##21 ap4s1 (ENSACIG00000011954) #22 ENSACIG00000011962 #23 ENSACIG00000011980 #23 HEATR5A (ENSACIG00000011999) #24 ENSACIG00000012086 hikeshi (ENSACIG00000012196) dhrs13a.2 (ENSACIG00000012209) MDGA2 (ENSACIG00000012232) ENSACIG00000012270 slc3a2b (ENSACIG00000012277) zgc:109986 (ENSACIG00000012304) ak7b (ENSACIG00000012334) vrk1 (ENSACIG00000012393) Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000157038.a.b.u.b ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000157038.a.b.u.b ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 Haplochromini ANCESTRAL SPECIES 42 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000157038.a.b.u.b ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 Burton s mouthbrooder MODERN SPECIES 569 egln3 (ENSHBUG00000015449) #31 sptssa (ENSHBUG00000015484) #32 eapp (ENSHBUG00000015496) #33 PRKD1 (ENSHBUG00000015648) #17 foxg1a (ENSHBUG00000015682) #16 ENSHBUG00000015705 ENSHBUG00000016091 ehd4 (ENSHBUG00000016153) g2e3 (ENSHBUG00000016168) #18 scfd1 (ENSHBUG00000016430) #19 coch (ENSHBUG00000016503) #20 strn3 (ENSHBUG00000000483) ##21 ap4s1 (ENSHBUG00000000489) #22 ENSHBUG00000016632 #23 Haplochromini_A ANCESTRAL SPECIES 44 ENSGT00940000154553.a.b #28 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 P. nyererei MODERN SPECIES 324 ENSPNYG00000014476 ENSPNYG00000014444 #29 ENSPNYG00000014421 NPAS3 (ENSPNYG00000014398) #30 egln3 (ENSPNYG00000014374) #31 sptssa (ENSPNYG00000014367) #32 eapp (ENSPNYG00000014361) #33 PRKD1 (ENSPNYG00000014311) #17 foxg1a (ENSPNYG00000014291) #16 ENSPNYG00000013995 ehd4 (ENSPNYG00000013916) g2e3 (ENSPNYG00000013844) #18 scfd1 (ENSPNYG00000013788) #19 coch (ENSPNYG00000013761) #20 strn3 (ENSPNYG00000013710) ##21 ap4s1 (ENSPNYG00000013670) #22 hectd1 (ENSPNYG00000013578) #23 HEATR5A (ENSPNYG00000013359) #24 hikeshi (ENSPNYG00000013322) Haplochromini_B ANCESTRAL SPECIES 119 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 Zebra mbuna MODERN SPECIES 142 ehd4 (ENSMZEG00005004542) g2e3 (ENSMZEG00005004527) #18 scfd1 (ENSMZEG00005004486) #19 coch (ENSMZEG00005004465) #20 strn3 (ENSMZEG00005004442) ##21 ap4s1 (ENSMZEG00005004423) #22 hectd1 (ENSMZEG00005004328) #23 HEATR5A (ENSMZEG00005004107) #24 Eastern happy MODERN SPECIES 5 ENSACLG00000018354 ubash3bb (ENSACLG00000018288) gkup (ENSACLG00000018216) usf1l (ENSACLG00000018193) ENSACLG00000018024 CLCN2 (ENSACLG00000017984) ENSACLG00000017974 ENSACLG00000017960 foxg1a (ENSACLG00000017908) #16 ENSACLG00000017296 ehd4 (ENSACLG00000017182) g2e3 (ENSACLG00000017147) #18 scfd1 (ENSACLG00000017070) #19 coch (ENSACLG00000016965) #20 strn3 (ENSACLG00000016888) ##21 ap4s1 (ENSACLG00000016857) #22 hectd1 (ENSACLG00000016633) #23 HEATR5A (ENSACLG00000016427) #24 hikeshi (ENSACLG00000016412) ENSACLG00000016344 ENSACLG00000016329 tbcela (ENSACLG00000016175) ENSACLG00000016164 usp2a (ENSACLG00000016110) TLCD3A (ENSACLG00000016090) gemin4 (ENSACLG00000016073) ENSACLG00000016049 ENSACLG00000016018 ENSACLG00000015935 ENSACLG00000015922 smtnl (ENSACLG00000015818) Lyretail cichlid MODERN SPECIES 299 ENSNBRG00000022764 #29 NPAS3 (ENSNBRG00000022746) #30 egln3 (ENSNBRG00000022731) #31 sptssa (ENSNBRG00000022727) #32 eapp (ENSNBRG00000022713) #33 PRKD1 (ENSNBRG00000022691) #17 foxg1a (ENSNBRG00000022682) #16 ENSNBRG00000022651 ENSNBRG00000022636 ehd4 (ENSNBRG00000022623) g2e3 (ENSNBRG00000022590) #18 ENSNBRG00000022568 scfd1 (ENSNBRG00000022555) #19 coch (ENSNBRG00000022518) #20 strn3 (ENSNBRG00000022491) ##21 ap4s1 (ENSNBRG00000022483) #22 ENSNBRG00000022477 #23 HEATR5A (ENSNBRG00000022437) #24 hikeshi (ENSNBRG00000022423) galcb (ENSNBRG00000022375) ENSNBRG00000022352 dicer1 (ENSNBRG00000022306) ENSNBRG00000022281 syne3 (ENSNBRG00000022250) gabrr2a (ENSNBRG00000022229) rragd (ENSNBRG00000022211) gja10a (ENSNBRG00000022195) ENSNBRG00000022187 ENSNBRG00000022175 GPR135 (ENSNBRG00000022167) HHIPL1 (ENSNBRG00000022132) Nile tilapia MODERN SPECIES 10 ARHGAP5 (ENSONIG00000001785) #28 AKAP6 (ENSONIG00000001789) #29 NPAS3 (ENSONIG00000037265) #30 egln3 (ENSONIG00000035400) #31 sptssa (ENSONIG00000036220) #32 eapp (ENSONIG00000001809) #33 PRKD1 (ENSONIG00000001814) #17 foxg1a (ENSONIG00000029950) #16 ENSONIG00000038497 ENSONIG00000001828 ehd4 (ENSONIG00000038089) g2e3 (ENSONIG00000001857) #18 scfd1 (ENSONIG00000001862) #19 coch (ENSONIG00000001879) #20 strn3 (ENSONIG00000001884) ##21 ap4s1 (ENSONIG00000001896) #22 hectd1 (ENSONIG00000001899) #23 HEATR5A (ENSONIG00000001918) #24 hikeshi (ENSONIG00000020832) slc3a2b (ENSONIG00000001729) ENSONIG00000032516 ENSONIG00000030475 zgc:109986 (ENSONIG00000001727) ENSONIG00000042145 ak7b (ENSONIG00000001719) ENSONIG00000041208 ENSONIG00000034768 ENSONIG00000031142 ENSONIG00000028025 map3k7 (ENSONIG00000011334) GPR135 (ENSONIG00000020519) Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 Carangaria_A ANCESTRAL SPECIES 98 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b Barramundi perch MODERN SPECIES 10 OPN4 (ENSLCAG00010018412) ENSLCAG00010018422 ENSLCAG00010018428 myoz1b (ENSLCAG00010018430) SYNPO2L (ENSLCAG00010018435) sec24c (ENSLCAG00010018553) ENSLCAG00010019057 ENSLCAG00010019061 ENSLCAG00010019069 ENSLCAG00010019601 ENSLCAG00010021510 ENSLCAG00010021512 ENSLCAG00010021513 ENSLCAG00010021514 strn3 (ENSLCAG00010021518) ##21 ap4s1 (ENSLCAG00010021527) #22 Seriola ANCESTRAL SPECIES 102 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00940000158051 #30 ENSGT00810000125473.B #29 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b Yellowtail amberjack MODERN SPECIES 2527 ENSSLDG00000020416 ##21 ap4s1 (ENSSLDG00000020407) #22 ENSSLDG00000020398 #23 Greater amberjack MODERN SPECIES 163 egln3 (ENSSDUG00000010655) #31 sptssa (ENSSDUG00000010684) #32 eapp (ENSSDUG00000010689) #33 ENSSDUG00000010718 PRKD1 (ENSSDUG00000010737) #17 foxg1a (ENSSDUG00000010776) #16 ENSSDUG00000010788 ENSSDUG00000010913 ehd4 (ENSSDUG00000010947) ENSSDUG00000010967 g2e3 (ENSSDUG00000010993) #18 ENSSDUG00000011152 scfd1 (ENSSDUG00000011167) #19 coch (ENSSDUG00000011195) #20 strn3 (ENSSDUG00000011224) ##21 ap4s1 (ENSSDUG00000011269) #22 hectd1 (ENSSDUG00000011288) #23 HEATR5A (ENSSDUG00000011377) #24 hikeshi (ENSSDUG00000011450) dhrs13a.1 (ENSSDUG00000011461) dhrs13a.2 (ENSSDUG00000011468) ENSSDUG00000011482 ENSSDUG00000011490 Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 ENSGT00940000162596 Tongue sole MODERN SPECIES ENSCSEG00000010730 ENSCSEG00000010747 DCTN1 (ENSCSEG00000010866) sptssa (ENSCSEG00000011058) #32 eapp (ENSCSEG00000011062) #33 PRKD1 (ENSCSEG00000011076) #17 ENSCSEG00000011106 foxg1a (ENSCSEG00000011113) #16 ENSCSEG00000011116 ENSCSEG00000011139 ehd4 (ENSCSEG00000011195) coch (ENSCSEG00000011217) #20 scfd1 (ENSCSEG00000011230) #19 g2e3 (ENSCSEG00000011272) #18 strn3 (ENSCSEG00000011317) ##21 ap4s1 (ENSCSEG00000011445) #22 hectd1 (ENSCSEG00000011469) #23 HEATR5A (ENSCSEG00000011564) #24 hikeshi (ENSCSEG00000011650) hikeshi (ENSCSEG00000011654) dhrs13a.2 (ENSCSEG00000011659) ENSCSEG00000011729 slc3a2b (ENSCSEG00000011824) zgc:109986 (ENSCSEG00000011830) ENSCSEG00000011841 ENSCSEG00000011854 #36 cfl2 (ENSCSEG00000011860) #35 snx6 (ENSCSEG00000011868) #34 psma3 (ENSCSEG00000011909) arid4a (ENSCSEG00000011930) ENSCSEG00000011975 Turbot MODERN SPECIES 8 ppp2r5eb (ENSSMAG00000034196) wdr89 (ENSSMAG00000027044) SGPP1 (ENSSMAG00000034308) ENSSMAG00000036570 ENSSMAG00000037893 ENSSMAG00000001012 ENSSMAG00000034324 snapc1b (ENSSMAG00000001021) ENSSMAG00000028831 ENSSMAG00000024767 ENSSMAG00000037840 scfd1 (ENSSMAG00000001472) #19 coch (ENSSMAG00000001511) #20 ENSSMAG00000001535 strn3 (ENSSMAG00000001557) ##21 ap4s1 (ENSSMAG00000001721) #22 hectd1 (ENSSMAG00000001750) #23 HEATR5A (ENSSMAG00000001841) #24 ENSSMAG00000001930 ENSSMAG00000001974 ENSSMAG00000029463 ENSSMAG00000002079 ENSSMAG00000001071 ENSSMAG00000000840 dtd2 (ENSSMAG00000000833) #25 NUBPL (ENSSMAG00000000795) #27 ARHGAP5 (ENSSMAG00000000757) #28 ENSSMAG00000000960 ENSSMAG00000018689 #29 NPAS3 (ENSSMAG00000034084) #30 ENSSMAG00000034079 Anabantaria ANCESTRAL SPECIES 10 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00940000153804.B ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 ENSGT00940000162596 Anabantoidei ANCESTRAL SPECIES 9 ENSGT01030000234583.a.a.c.b.a.a.b.b ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000153804.B ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 #36 ENSGT00950000183000.c.b #35 ENSGT00940000154940 #34 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102 ENSGT00940000162596 Climbing perch MODERN SPECIES 13 ENSATEG00000016407 egln3 (ENSATEG00000016315) #31 sptssa (ENSATEG00000016285) #32 eapp (ENSATEG00000016262) #33 ENSATEG00000025189 #17 ENSATEG00000027849 #17 ENSATEG00000016142 foxg1a (ENSATEG00000016130) #16 ENSATEG00000015643 ehd4 (ENSATEG00000015573) g2e3 (ENSATEG00000015553) #18 scfd1 (ENSATEG00000015471) #19 coch (ENSATEG00000015389) #20 ENSATEG00000015368 strn3 (ENSATEG00000015245) ##21 ap4s1 (ENSATEG00000015227) #22 hectd1 (ENSATEG00000015098) #23 ENSATEG00000015068 HEATR5A (ENSATEG00000014961) #24 ENSATEG00000014913 ENSATEG00000014717 ENSATEG00000014622 ENSATEG00000014605 ENSATEG00000014580 ENSATEG00000014569 zgc:109986 (ENSATEG00000014565) BAZ1A (ENSATEG00000014536) #36 ENSATEG00000028863 #36 cfl2 (ENSATEG00000028424) #35 snx6 (ENSATEG00000014485) #34 psma3 (ENSATEG00000014448) Siamese fighting fish MODERN SPECIES 12 ENSBSLG00000007633 #29 ENSBSLG00000007626 ENSBSLG00000007622 NPAS3 (ENSBSLG00000007614) #30 egln3 (ENSBSLG00000007597) #31 ENSBSLG00000007595 sptssa (ENSBSLG00000007592) #32 eapp (ENSBSLG00000007589) #33 ENSBSLG00000007349 #17 foxg1a (ENSBSLG00000007331) #16 ehd4 (ENSBSLG00000006613) g2e3 (ENSBSLG00000006025) #18 scfd1 (ENSBSLG00000005976) #19 coch (ENSBSLG00000005967) #20 strn3 (ENSBSLG00000005421) ##21 ap4s1 (ENSBSLG00000005279) #22 hectd1 (ENSBSLG00000012567) #23 ENSBSLG00000012558 hikeshi (ENSBSLG00000011962) DHRS13 (ENSBSLG00000011482) dhrs13a.2 (ENSBSLG00000011472) slc3a2b (ENSBSLG00000011462) ENSBSLG00000011458 ENSBSLG00000010948 zgc:109986 (ENSBSLG00000010904) BAZ1A (ENSBSLG00000010664) #36 cfl2 (ENSBSLG00000010594) #35 snx6 (ENSBSLG00000009550) #34 psma3 (ENSBSLG00000009358) arid4a (ENSBSLG00000009126) timm9 (ENSBSLG00000009099) Zig-zag eel MODERN SPECIES 14 ENSMAMG00000000034 #29 ENSMAMG00000000033 #29 NPAS3 (ENSMAMG00000000032) #30 ENSMAMG00000026367 egln3 (ENSMAMG00000000031) #31 sptssa (ENSMAMG00000000030) #32 eapp (ENSMAMG00000000029) #33 ENSMAMG00000000028 #17 ENSMAMG00000000027 #16 ehd4 (ENSMAMG00000000024) ENSMAMG00000028251 coch (ENSMAMG00000000022) #20 ENSMAMG00000000021 #19 g2e3 (ENSMAMG00000000019) #18 strn3 (ENSMAMG00000000018) ##21 ap4s1 (ENSMAMG00000000017) #22 hectd1 (ENSMAMG00000000016) #23 ENSMAMG00000000015 ENSMAMG00000026657 ENSMAMG00000025908 ENSMAMG00000000010 ENSMAMG00000027189 ENSMAMG00000027251 ENSMAMG00000000008 #24 Eupercaria ANCESTRAL SPECIES 9 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00940000158836.a.a ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000158601 ENSGT00940000159386 #20 ENSGT00550000074845 #19 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000004056 ENSGT00940000155599.i.b ENSGT00940000164564.e.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 ENSGT00940000159561.m ENSGT00900000141196 ENSGT00530000064222.b ENSGT00940000165169.b.a ENSGT00940000160102 ENSGT00940000156159 ENSGT00550000074912 ENSGT00940000154940 #34 ENSGT00950000183000.c.b #35 Tetraodon MODERN SPECIES 26 ENSTNIG00000002634 tekt2 (ENSTNIG00000019548) usf2 (ENSTNIG00000002633) LMNA (ENSTNIG00000002632) scn1bb (ENSTNIG00000002631) ENSTNIG00000002630 NT5C3B (ENSTNIG00000002615) FKBP10 (ENSTNIG00000002614) p3h4 (ENSTNIG00000002613) ENSTNIG00000002612 ENSTNIG00000000161 ENSTNIG00000002610 ENSTNIG00000002609 #19 g2e3 (ENSTNIG00000002608) #18 strn3 (ENSTNIG00000002607) ##21 ap4s1 (ENSTNIG00000002606) #22 hectd1 (ENSTNIG00000002605) #23 HEATR5A (ENSTNIG00000002604) #24 hikeshi (ENSTNIG00000002603) dhrs13a.2 (ENSTNIG00000002602) haus2 (ENSTNIG00000001117) ENSTNIG00000002601 lrrc57 (ENSTNIG00000002600) ENSTNIG00000002599 atg14 (ENSTNIG00000002598) tbpl2 (ENSTNIG00000002597) jmjd7 (ENSTNIG00000002596) lgals3b (ENSTNIG00000002595) timm9 (ENSTNIG00000002594) arid4a (ENSTNIG00000002593) psma3 (ENSTNIG00000001368) Fugu MODERN SPECIES 11 snapc1b (ENSTRUG00000003344) SYT16 (ENSTRUG00000026371) SGPP1 (ENSTRUG00000025016) AKAP6 (ENSTRUG00000023905) #29 NPAS3 (ENSTRUG00000004071) #30 egln3 (ENSTRUG00000024714) #31 sptssa (ENSTRUG00000027104) #32 eapp (ENSTRUG00000031136) #33 PRKD1 (ENSTRUG00000002543) #17 foxg1a (ENSTRUG00000012582) #16 ehd4 (ENSTRUG00000022398) coch (ENSTRUG00000027600) #20 scfd1 (ENSTRUG00000011884) #19 ENSTRUG00000011636 strn3 (ENSTRUG00000011310) ##21 ap4s1 (ENSTRUG00000011227) #22 hectd1 (ENSTRUG00000011055) #23 hikeshi (ENSTRUG00000025477) dhrs13a.2 (ENSTRUG00000010572) haus2 (ENSTRUG00000023669) ENSTRUG00000010421 lrrc57 (ENSTRUG00000010341) ENSTRUG00000028870 ENSTRUG00000028990 atg14 (ENSTRUG00000023016) trf3 (ENSTRUG00000009283) jmjd7 (ENSTRUG00000009235) fbxo34 (ENSTRUG00000020409) lgals3b (ENSTRUG00000009104) timm9 (ENSTRUG00000019688) arid4a (ENSTRUG00000008557) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000178078 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 Ballan wrasse MODERN SPECIES 569 ENSLBEG00000020156 ehd4 (ENSLBEG00000020127) g2e3 (ENSLBEG00000020092) #18 scfd1 (ENSLBEG00000020023) #19 ENSLBEG00000019993 coch (ENSLBEG00000019947) #20 ENSLBEG00000019921 strn3 (ENSLBEG00000019840) ##21 ap4s1 (ENSLBEG00000019788) #22 ENSLBEG00000019764 #23 hectd1 (ENSLBEG00000019658) #23 HEATR5A (ENSLBEG00000019543) #24 hikeshi (ENSLBEG00000019476) dhrs13a.1 (ENSLBEG00000019189) dhrs13a.2 (ENSLBEG00000019100) ENSLBEG00000019070 ENSLBEG00000019055 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00810000125473.B #29 ENSGT00940000166226 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00940000168627 ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00950000183193.B #27 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845.g #19 ENSGT00940000159386 #20 ENSGT00940000168627.e.b ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000165169.b.a ENSGT00530000064222.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 25 ENSGT00940000154553.a.b #28 ENSGT00810000125473.B #29 ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000158601 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845.g #19 ENSGT00940000159386 #20 ENSGT00940000168627.e.b ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000156646.d ENSGT00940000155369.A.d.a Large yellow croaker MODERN SPECIES 489 LRRC24 (ENSLCRG00005000787) LONP1 (ENSLCRG00005000889) RSPH6A (ENSLCRG00005001107) dohh (ENSLCRG00005001111) cherp (ENSLCRG00005001127) klf2a (ENSLCRG00005001164) EPS15L1 (ENSLCRG00005001166) ENSLCRG00005001174 lrrc57 (ENSLCRG00005001177) MDGA2 (ENSLCRG00005001190) slc3a2b (ENSLCRG00005001250) scfd1 (ENSLCRG00005001262) #19 coch (ENSLCRG00005001307) #20 ENSLCRG00005003973 strn3 (ENSLCRG00005003979) ##21 ap4s1 (ENSLCRG00005004138) #22 hectd1 (ENSLCRG00005004149) #23 HEATR5A (ENSLCRG00005004193) #24 hikeshi (ENSLCRG00005004392) DHRS13 (ENSLCRG00005004394) ENSLCRG00005004459 LRRC7 (ENSLCRG00005004474) ENSLCRG00005004943 nasp (ENSLCRG00005004949) SOX14 (ENSLCRG00005004953) CLDN18 (ENSLCRG00005004954) HS2ST1 (ENSLCRG00005004956) lmo4b (ENSLCRG00005004958) kyat3.2 (ENSLCRG00005004968) LRRC8C (ENSLCRG00005005676) lrrc8db (ENSLCRG00005005678) European seabass MODERN SPECIES 3 ENSDLAG00005031932 ENSDLAG00005027290 ENSDLAG00005002749 ENSDLAG00005015349 ENSDLAG00005003137 ENSDLAG00005017851 ENSDLAG00005005403 ENSDLAG00005011207 ENSDLAG00005011518 ENSDLAG00005035082 g2e3 (ENSDLAG00005016919) #18 scfd1 (ENSDLAG00005034923) #19 coch (ENSDLAG00005030270) #20 ENSDLAG00005026562 strn3 (ENSDLAG00005031168) ##21 ap4s1 (ENSDLAG00005034366) #22 hectd1 (ENSDLAG00005016703) #23 HEATR5A (ENSDLAG00005031319) #24 ENSDLAG00005016884 ENSDLAG00005031937 ENSDLAG00005002934 ENSDLAG00005031753 ENSDLAG00005017789 ENSDLAG00005028158 Gilthead seabream MODERN SPECIES 7 jmjd7 (ENSSAUG00010002128) fbxo34 (ENSSAUG00010002132) ENSSAUG00010002140 ENSSAUG00010002170 mgaa (ENSSAUG00010002437) ENSSAUG00010002446 tyro3 (ENSSAUG00010002447) lrrc57 (ENSSAUG00010002452) haus2 (ENSSAUG00010002453) ENSSAUG00010002457 ENSSAUG00010002460 ENSSAUG00010002462 ENSSAUG00010002464 ENSSAUG00010002468 strn3 (ENSSAUG00010002537) ##21 ap4s1 (ENSSAUG00010005736) #22 hectd1 (ENSSAUG00010005756) #23 HEATR5A (ENSSAUG00010005864) #24 hikeshi (ENSSAUG00010008685) ENSSAUG00010008687 dhrs13a.2 (ENSSAUG00010008688) ENSSAUG00010008692 ENSSAUG00010008693 ENSSAUG00010008694 coch (ENSSAUG00010008696) #20 ENSSAUG00010008699 coch (ENSSAUG00010008704) #20 ENSSAUG00010008708 scfd1 (ENSSAUG00010008727) #19 g2e3 (ENSSAUG00010010170) #18 ehd4 (ENSSAUG00010010174) Perciformes ANCESTRAL SPECIES 36 ENSGT00950000183095.a.b.a.a ##21 ENSGT00940000153804.B ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 Cottioidei ANCESTRAL SPECIES 66 ENSGT00950000183095.a.b.a.a ##21 ENSGT00940000168627 ENSGT00950000182865.b.a.a #18 ENSGT00550000074845 #19 ENSGT00940000159386 #20 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00390000011854 ENSGT00940000159561.m ENSGT00900000141196 ENSGT00940000165169.b.a ENSGT00940000157224.ab.c Stickleback MODERN SPECIES 261 scfd1 (ENSGACG00000012926) #19 g2e3 (ENSGACG00000012915) #18 ENSGACG00000012906 strn3 (ENSGACG00000012892) ##21 ap4s1 (ENSGACG00000012879) #22 hectd1 (ENSGACG00000012853) #23 slc3a2b (ENSGACG00000012841) Lumpfish MODERN SPECIES 14 exoc3l4 (ENSCLMG00005008896) ENSCLMG00005008897 ENSCLMG00005008898 ENSCLMG00005008916 ENSCLMG00005008921 cdca4 (ENSCLMG00005008922) ahsa1b (ENSCLMG00005008924) ENSCLMG00005008928 pgrmc2 (ENSCLMG00005008930) asmt2 (ENSCLMG00005008932) jade1 (ENSCLMG00005009036) g2e3 (ENSCLMG00005009038) #18 scfd1 (ENSCLMG00005009049) #19 coch (ENSCLMG00005009065) #20 ENSCLMG00005009066 ap4s1 (ENSCLMG00005009067) #22 ENSCLMG00005009068 #23 HEATR5A (ENSCLMG00005009093) #24 hikeshi (ENSCLMG00005012630) dhrs13a.2 (ENSCLMG00005012631) ENSCLMG00005012632 ENSCLMG00005012670 ENSCLMG00005013160 lrrc57 (ENSCLMG00005013161) tyro3 (ENSCLMG00005013163) ENSCLMG00005013233 ENSCLMG00005013235 atg14 (ENSCLMG00005013237) tbpl2 (ENSCLMG00005013238) jmjd7 (ENSCLMG00005013241) ENSCLMG00005013244 Perciformes_a ANCESTRAL SPECIES 48 ENSGT00940000158051 #30 ENSGT00940000158745 #31 ENSGT00390000002766.b.b #32 ENSGT00390000001332 #33 ENSGT00950000183024.a.b.a #17 ENSGT00940000160678.a #16 ENSGT00940000161549.a.a ENSGT00940000158601 ENSGT00940000159386 #20 ENSGT00550000074845 #19 ENSGT00950000182865.b.a.a #18 ENSGT00940000153804.B ENSGT00950000183095.a.b.a.a ##21 ENSGT00970000193421.B #22 ENSGT00940000156572 #23 ENSGT00390000006205.b #24 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 Pike perch MODERN SPECIES 473 ENSSLUG00000020657 strn3 (ENSSLUG00000020687) ##21 ENSSLUG00000021030 ap4s1 (ENSSLUG00000021031) #22 Channel bull blenny MODERN SPECIES 14 atl1 (ENSCGOG00000022711) ENSCGOG00000022727 pygl (ENSCGOG00000022761) NPAS3 (ENSCGOG00000013332) #30 egln3 (ENSCGOG00000013359) #31 sptssa (ENSCGOG00000013360) #32 eapp (ENSCGOG00000013361) #33 PRKD1 (ENSCGOG00000013397) #17 ENSCGOG00000015193 ehd4 (ENSCGOG00000015288) coch (ENSCGOG00000016770) #20 scfd1 (ENSCGOG00000016938) #19 g2e3 (ENSCGOG00000017712) #18 ccdc65 (ENSCGOG00000017717) strn3 (ENSCGOG00000017733) ##21 ap4s1 (ENSCGOG00000018201) #22 hectd1 (ENSCGOG00000018233) #23 HEATR5A (ENSCGOG00000018946) #24 hikeshi (ENSCGOG00000020116) dhrs13a.1 (ENSCGOG00000020129) dhrs13a.2 (ENSCGOG00000020222) MDGA2 (ENSCGOG00000020243) slc3a2b (ENSCGOG00000020793) lrrc57 (ENSCGOG00000020832) tyro3 (ENSCGOG00000020834) ENSCGOG00000020858 ENSCGOG00000020860 ENSCGOG00000020864 ENSCGOG00000020884 atg14 (ENSCGOG00000020885) tbpl2 (ENSCGOG00000020891) Cod MODERN SPECIES 18 ENSGMOG00000030538 ENSGMOG00000036545 ENSGMOG00000037191 ENSGMOG00000019814 ENSGMOG00000036276 ENSGMOG00000030535 ENSGMOG00000028819 ENSGMOG00000023565 #32 ENSGMOG00000024480 #33 ENSGMOG00000034342 #17 ENSGMOG00000014910 coch (ENSGMOG00000001380) #20 ENSGMOG00000006205 #19 g2e3 (ENSGMOG00000006176) #18 strn3 (ENSGMOG00000006143) ##21 ap4s1 (ENSGMOG00000006133) #22 hectd1 (ENSGMOG00000006063) #23 HEATR5A (ENSGMOG00000033228) #24 ENSGMOG00000022996 ENSGMOG00000006936 ENSGMOG00000014294 ENSGMOG00000031559 ENSGMOG00000006507 ENSGMOG00000006518 tyro3 (ENSGMOG00000013831) ENSGMOG00000023984 ENSGMOG00000007697 ENSGMOG00000027362 jmjd7 (ENSGMOG00000004910) tbpl2 (ENSGMOG00000004886) atg14 (ENSGMOG00000028864) Spotted gar MODERN SPECIES 673 tecpr2 (ENSLOCG00000009804) cinp (ENSLOCG00000009791) ENSLOCG00000009783 ehd4 (ENSLOCG00000009774) SPTBN5 (ENSLOCG00000009748) PLA2G4B (ENSLOCG00000009738) ENSLOCG00000009734 NOVA1 (ENSLOCG00000009727) #14 foxg1a (ENSLOCG00000017702) #16 PRKD1 (ENSLOCG00000009700) #17 ENSLOCG00000009691 #18 scfd1 (ENSLOCG00000009663) #19 opn6b (ENSLOCG00000009657) coch (ENSLOCG00000009643) #20 STRN3 (ENSLOCG00000009618) #21 ap4s1 (ENSLOCG00000009611) #22 hectd1 (ENSLOCG00000009590) #23 HEATR5A (ENSLOCG00000009580) #24 ENSLOCG00000009572 #24 dtd2 (ENSLOCG00000009563) #25 nubpl (ENSLOCG00000009552) #27 ARHGAP5 (ENSLOCG00000009544) #28 AKAP6 (ENSLOCG00000009529) #29 NPAS3 (ENSLOCG00000009512) #30 egln3 (ENSLOCG00000009500) #31 sptssa (ENSLOCG00000009497) #32 eapp (ENSLOCG00000009484) #33 snx6 (ENSLOCG00000009469) #34 cfl2 (ENSLOCG00000009463) #35 BAZ1A (ENSLOCG00000009448) #36 srp54 (ENSLOCG00000009440) Reedfish MODERN SPECIES 7 ENSECRG00000018199 gjd2b (ENSECRG00000018171) stxbp6 (ENSECRG00000018146) #13 NOVA1 (ENSECRG00000018086) #14 ENSECRG00000018053 ENSECRG00000018036 foxg1a (ENSECRG00000018023) #16 ENSECRG00000018008 ENSECRG00000017979 #17 ENSECRG00000017951 g2e3 (ENSECRG00000017924) #18 scfd1 (ENSECRG00000017794) #19 opn6b (ENSECRG00000017745) coch (ENSECRG00000017642) #20 STRN3 (ENSECRG00000017315) #21 ap4s1 (ENSECRG00000017237) #22 hectd1 (ENSECRG00000017052) #23 HEATR5A (ENSECRG00000016971) #24 dtd2 (ENSECRG00000016948) #25 nubpl (ENSECRG00000016921) #27 ARHGAP5 (ENSECRG00000016897) #28 AKAP6 (ENSECRG00000016857) #29 ENSECRG00000016843 ssna1 (ENSECRG00000016832) NPAS3 (ENSECRG00000016667) #30 egln3 (ENSECRG00000016585) #31 ENSECRG00000016567 ENSECRG00000016548 sptssa (ENSECRG00000016533) #32 eapp (ENSECRG00000016516) #33 snx6 (ENSECRG00000016414) #34 Elephant shark MODERN SPECIES 1513 PRKD1 (ENSCMIG00000004110) #17 G2E3 (ENSCMIG00000004024) #18 scfd1 (ENSCMIG00000003855) #19 coch (ENSCMIG00000003753) #20 strn3 (ENSCMIG00000003666) #21 ap4s1 (ENSCMIG00000003608) #22 hectd1 (ENSCMIG00000003581) #23 HEATR5A (ENSCMIG00000003460) #24 dtd2 (ENSCMIG00000003352) #25 ENSCMIG00000003348 ENSCMIG00000003345 nubpl (ENSCMIG00000003335) #27 ARHGAP5 (ENSCMIG00000003319) #28 AKAP6 (ENSCMIG00000003312) #29 ENSCMIG00000003304 NPAS3 (ENSCMIG00000003270) #30 egln3 (ENSCMIG00000003240) #31 ENSCMIG00000003238 sptssa (ENSCMIG00000003234) #32 snx6 (ENSCMIG00000002881) #34 cfl2 (ENSCMIG00000002696) #35 Cyclostomata ANCESTRAL SPECIES ENSGT00970000193421.B #22 Hagfish MODERN SPECIES 490 ENSEBUG00000006037 ENSEBUG00000004835 ENSEBUG00000014770 PDPK1 (ENSEBUG00000005160) ENSEBUG00000009292 #22 ENSEBUG00000015593 ENSEBUG00000008931 Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Bilateria ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Chordata ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Ciona ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Ciona savignyi MODERN SPECIES 60 ENSCSAVG00000001767 ENSCSAVG00000001768 ENSCSAVG00000001769 ENSCSAVG00000001775 ENSCSAVG00000001777 ENSCSAVG00000001779 ENSCSAVG00000001788 ENSCSAVG00000001903 ENSCSAVG00000001916 ENSCSAVG00000001917 ENSCSAVG00000001931 ENSCSAVG00000001935 ENSCSAVG00000001938 ENSCSAVG00000001956 ENSCSAVG00000001963 ENSCSAVG00000002036 ##22 ENSCSAVG00000002040 ENSCSAVG00000002044 ENSCSAVG00000002049 ENSCSAVG00000002229 ENSCSAVG00000002237 ENSCSAVG00000002293 ENSCSAVG00000002520 ENSCSAVG00000002525 ENSCSAVG00000002536 ENSCSAVG00000002547 ENSCSAVG00000002551 ENSCSAVG00000002555 ENSCSAVG00000002557 ENSCSAVG00000002571 ENSCSAVG00000002577 Ciona intestinalis MODERN SPECIES 4 ENSCING00000023543 ENSCING00000014532 ENSCING00000024944 ENSCING00000020603 ENSCING00000023886 ENSCING00000014535 ENSCING00000014536 ENSCING00000014478 ENSCING00000014476 ENSCING00000015543 ENSCING00000023999 ENSCING00000014480 ENSCING00000023024 ENSCING00000014481 ENSCING00000014482 ENSCING00000023836 ##22 ENSCING00000001528 ENSCING00000022408 ENSCING00000023192 ENSCING00000020706 ENSCING00000001534 zf(mynd)-12 (ENSCING00000001536) ENSCING00000014488 ENSCING00000001543 ENSCING00000014489 ENSCING00000001546 ENSCING00000001560 ENSCING00000014494 ENSCING00000001563 ENSCING00000018680 zf(c2h2)-2 (ENSCING00000001565) Vertebrata ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Cyclostomata ANCESTRAL SPECIES 555 ENSGT00940000156841.c ENSGT00970000193421.A ##22 Lamprey MODERN SPECIES 316 SPRED2 (ENSPMAG00000009218) ap2s1 (ENSPMAG00000009213) ##22 Hagfish DUPLICATION Hagfish MODERN SPECIES 374 ENSEBUG00000014548 TMEM223 (ENSEBUG00000008921) ENSEBUG00000005322 ENSEBUG00000001735 ENSEBUG00000015002 ENSEBUG00000002096 ENSEBUG00000016602 ENSEBUG00000010698 ENSEBUG00000013702 MCM8 (ENSEBUG00000007956) ENSEBUG00000013119 ENSEBUG00000013832 ENSEBUG00000007561 ENSEBUG00000006103 ENSEBUG00000013050 AP2S1 (ENSEBUG00000014322) ##22 ENSEBUG00000006940 Hagfish MODERN SPECIES 730 ENSEBUG00000010132 ##22 Gnathostomata ANCESTRAL SPECIES 1107 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Elephant shark MODERN SPECIES 1886 ENSCMIG00000011842 ##28 ap2s1 (ENSCMIG00000011822) ##22 Euteleostomi ANCESTRAL SPECIES 673 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Sarcopterygii ANCESTRAL SPECIES 598 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Coelacanth MODERN SPECIES 514 hyal1 (ENSLACG00000000256) ENSLACG00000003934 #30 ENSLACG00000010302 ##28 AP2S1 (ENSLACG00000012384) ##22 ENSLACG00000012621 ENSLACG00000013126 ENSLACG00000014112 DHX34 (ENSLACG00000014421) sycn.2 (ENSLACG00000014724) ENSLACG00000014786 ENSLACG00000014891 ENSLACG00000014980 nova2 (ENSLACG00000015223) #14 IRF2BP1 (ENSLACG00000015853) foxa3 (ENSLACG00000016102) SYMPK (ENSLACG00000016497) RSPH4A (ENSLACG00000016667) Tetrapoda ANCESTRAL SPECIES 71 ENSGT00940000156119 ENSGT00650000093443 ENSGT00390000008756 ENSGT00390000012948.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161006 ENSGT00390000003107.b ENSGT00530000064222.a ENSGT00940000177245 ENSGT00940000153887.B ENSGT01100000263537.b.b.c.a.a ENSGT00390000009795 Anura ANCESTRAL SPECIES 86 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00940000158785 ENSGT00940000175813 ENSGT00390000017608 ENSGT00940000161006.b ENSGT00390000003107.b ENSGT00530000064222.a ENSGT00940000153887.B ENSGT01100000263537.b.b.c.a.a ENSGT00390000009795 ENSGT00940000156765 ENSGT00940000160599 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000012552 ENSLLEG00000012520 ENSLLEG00000012395 ENSLLEG00000012370 SH3BGRL (ENSLLEG00000012318) ENSLLEG00000012280 BRWD3 (ENSLLEG00000012042) ENSLLEG00000011986 TENT5D (ENSLLEG00000011962) CHMP1B (ENSLLEG00000011890) TBX22 (ENSLLEG00000011833) ITM2A (ENSLLEG00000028053) ENSLLEG00000028031 ENSLLEG00000027996 ENSLLEG00000027953 ##28 AP2S1 (ENSLLEG00000027801) ##22 ENSLLEG00000027768 SLC1A5 (ENSLLEG00000027633) FKRP (ENSLLEG00000027613) GNG8 (ENSLLEG00000027593) PTGIR (ENSLLEG00000027509) ENSLLEG00000027489 ENSLLEG00000026307 ENSLLEG00000026147 ENSLLEG00000026124 SNRPD2 (ENSLLEG00000026048) ENSLLEG00000026008 ENSLLEG00000025969 QPCTL (ENSLLEG00000025916) FBXO46 (ENSLLEG00000025901) ENSLLEG00000025854 Frog MODERN SPECIES 8 tmtops (ENSXETG00000017493) ENSXETG00000043654 cd40lg (ENSXETG00000044841) arhgef6 (ENSXETG00000017497) rbmx (ENSXETG00000003481) ENSXETG00000003479 ENSXETG00000037129 gpr101 (ENSXETG00000048252) zic3 (ENSXETG00000024458) ENSXETG00000041730 fgf13 (ENSXETG00000037165) f9 (ENSXETG00000003472) mcf2 (ENSXETG00000018322) atp11c (ENSXETG00000018290) arhgap35 (ENSXETG00000018284) ap2s1 (ENSXETG00000018283) ##22 slc1a5 (ENSXETG00000018275) fkrp (ENSXETG00000018274) dact3 (ENSXETG00000037153) ptgir (ENSXETG00000018270) ppp5c (ENSXETG00000018265) meiosin (ENSXETG00000048668) ENSXETG00000018263 snrpd2 (ENSXETG00000002173) pglyrp1 (ENSXETG00000018262) qpctl (ENSXETG00000018261) fbxo46 (ENSXETG00000047788) gipr (ENSXETG00000018255) eml1 (ENSXETG00000018242) vasp (ENSXETG00000018239) gpr4 (ENSXETG00000033328) Amniota ANCESTRAL SPECIES 80 ENSGT00940000163913 ENSGT00390000008756 ENSGT00390000012948.a ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000160667 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 Sauria ANCESTRAL SPECIES 54 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 Lepidosauria ANCESTRAL SPECIES 58 ENSGT00730000111686 ENSGT00970000194069 ENSGT00440000037640 ENSGT01040000240503.C ENSGT00940000164418 ENSGT00940000161957 ENSGT00940000163335 ENSGT00940000160719 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 tuatara MODERN SPECIES 1028 TMEM160 (ENSSPUG00000003376) NPAS1 (ENSSPUG00000003351) ARHGAP35 (ENSSPUG00000003327) AP2S1 (ENSSPUG00000003316) ##22 SLC1A5 (ENSSPUG00000003287) FKRP (ENSSPUG00000003278) STRN4 (ENSSPUG00000003253) ##21 PTGIR (ENSSPUG00000003066) ENSSPUG00000003046 PPP5C (ENSSPUG00000003033) HIF3A (ENSSPUG00000003020) SNRPD2 (ENSSPUG00000003011) ENSSPUG00000002994 SIX5 (ENSSPUG00000002955) DMPK (ENSSPUG00000002917) DMWD (ENSSPUG00000002869) SYMPK (ENSSPUG00000002789) ENSSPUG00000002682 NOVA2 (ENSSPUG00000002591) Episquamata ANCESTRAL SPECIES 7 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00940000158292.a.e Laterata ANCESTRAL SPECIES 17 ENSGT00940000175315 ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478 ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000165739 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000015376 ENSSMRG00000015373 ALKBH6 (ENSSMRG00000015372) CLIP3 (ENSSMRG00000015371) ENSSMRG00000015370 WDR62 (ENSSMRG00000015346) ENSSMRG00000015345 POLR2I (ENSSMRG00000015344) ENSSMRG00000015343 TBCB (ENSSMRG00000015342) ENSSMRG00000015341 ENSSMRG00000015340 TMEM160 (ENSSMRG00000015339) ENSSMRG00000015338 #30 ARHGAP35 (ENSSMRG00000015337) AP2S1 (ENSSMRG00000015336) ##22 SLC1A5 (ENSSMRG00000015335) FKRP (ENSSMRG00000015334) STRN4 (ENSSMRG00000015333) ##21 PRKD2 (ENSSMRG00000015332) ##17 DACT3 (ENSSMRG00000015331) GNG8 (ENSSMRG00000015330) PTGIR (ENSSMRG00000015328) CALM3 (ENSSMRG00000015327) ENSSMRG00000015326 PPP5C (ENSSMRG00000015324) HIF3A (ENSSMRG00000015322) ENSSMRG00000015320 SNRPD2 (ENSSMRG00000015318) ENSSMRG00000015316 ENSSMRG00000015311 Common wall lizard MODERN SPECIES 16 ENSPMRG00000008612 ENSPMRG00000008617 ENSPMRG00000008624 #16 ENSPMRG00000008628 HIF3A (ENSPMRG00000008634) PPP5C (ENSPMRG00000008661) ENSPMRG00000008686 CALM3 (ENSPMRG00000008690) PTGIR (ENSPMRG00000008692) GNG8 (ENSPMRG00000008695) DACT3 (ENSPMRG00000008698) PRKD2 (ENSPMRG00000008708) ##17 STRN4 (ENSPMRG00000008722) ##21 FKRP (ENSPMRG00000008731) SLC1A5 (ENSPMRG00000008739) AP2S1 (ENSPMRG00000008748) ##22 ARHGAP35 (ENSPMRG00000008755) ENSPMRG00000008759 #30 TMEM160 (ENSPMRG00000008765) ENSPMRG00000008769 ENSPMRG00000008772 EHD2 (ENSPMRG00000008778) NOP53 (ENSPMRG00000008785) ENSPMRG00000008791 ENSPMRG00000008794 SELENOW (ENSPMRG00000008798) ENSPMRG00000008802 CRX (ENSPMRG00000008809) ENSPMRG00000008813 DMAC2 (ENSPMRG00000008823) B3GNT8 (ENSPMRG00000008827) Toxicofera ANCESTRAL SPECIES 22 ENSGT00940000165970 ENSGT00440000037640 ENSGT01040000240503.C ENSGT00940000164418 ENSGT00940000161957 ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000161745.c ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 Lizard MODERN SPECIES 1177 ENSACAG00000043130 ENSACAG00000034878 ENSACAG00000011553 ENSACAG00000042379 ARHGAP35 (ENSACAG00000011599) ENSACAG00000035417 AP2S1 (ENSACAG00000011682) ##22 SLC1A5 (ENSACAG00000011724) FKRP (ENSACAG00000011805) STRN4 (ENSACAG00000011808) ##21 ENSACAG00000035878 #17 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000165970 ENSGT00440000037640 ENSGT01040000240503.C ENSGT00940000164418 ENSGT00940000161957 ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000158292.a.e Indian cobra MODERN SPECIES 11 ENSNNAG00000017056 CHP2 (ENSNNAG00000017039) ENSNNAG00000017030 ENSNNAG00000017021 ENSNNAG00000017011 ENSNNAG00000017001 CAPNS1 (ENSNNAG00000016820) ALKBH6 (ENSNNAG00000016788) CLIP3 (ENSNNAG00000016768) ENSNNAG00000016752 ENSNNAG00000016741 POLR2I (ENSNNAG00000016734) ENSNNAG00000016728 TBCB (ENSNNAG00000016719) ARHGAP35 (ENSNNAG00000016715) AP2S1 (ENSNNAG00000016712) ##22 SLC1A5 (ENSNNAG00000016706) FKRP (ENSNNAG00000016704) STRN4 (ENSNNAG00000016700) ##21 ENSNNAG00000016692 DACT3 (ENSNNAG00000016684) GNG8 (ENSNNAG00000016675) PTGIR (ENSNNAG00000016669) CALM3 (ENSNNAG00000016648) PPP5C (ENSNNAG00000016638) HIF3A (ENSNNAG00000016614) SNRPD2 (ENSNNAG00000016603) ENSNNAG00000016598 ENSNNAG00000016595 ENSNNAG00000016590 ENSNNAG00000016585 Elapidae_a ANCESTRAL SPECIES 33 ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000162237.a Blue-lipped sea krait MODERN SPECIES 7237 AP2S1 (ENSLLTG00000016069) ##22 SLC1A5 (ENSLLTG00000016073) FKRP (ENSLLTG00000016079) STRN4 (ENSLLTG00000016083) ##21 PRKD2 (ENSLLTG00000016094) ##17 ENSLLTG00000016102 Acanthophiinae ANCESTRAL SPECIES 32 ENSGT00940000164418 ENSGT00940000161957 ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00940000162237.a ENSGT00940000180177 Eastern brown snake MODERN SPECIES 77 ENSPTXG00000016634 CHP2 (ENSPTXG00000016638) ENSPTXG00000016642 CAPNS1 (ENSPTXG00000016644) ALKBH6 (ENSPTXG00000016647) CLIP3 (ENSPTXG00000016650) ENSPTXG00000016653 ENSPTXG00000016654 ENSPTXG00000016657 ENSPTXG00000016660 TBCB (ENSPTXG00000016663) ENSPTXG00000016667 ENSPTXG00000016669 TMEM160 (ENSPTXG00000016674) ARHGAP35 (ENSPTXG00000016676) AP2S1 (ENSPTXG00000016680) ##22 SLC1A5 (ENSPTXG00000016684) FKRP (ENSPTXG00000016691) ENSPTXG00000016693 ##21 PRKD2 (ENSPTXG00000016695) ##17 GNG8 (ENSPTXG00000016708) PTGIR (ENSPTXG00000016711) CALM3 (ENSPTXG00000016713) ENSPTXG00000016715 PPP5C (ENSPTXG00000016719) HIF3A (ENSPTXG00000016722) SNRPD2 (ENSPTXG00000016725) ENSPTXG00000016727 ENSPTXG00000016729 SIX5 (ENSPTXG00000016732) ENSPTXG00000016734 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 1572 AP2S1 (ENSNSUG00000002219) ##22 Mainland tiger snake MODERN SPECIES 386 ENSNSUG00000018718 ##22 FKRP (ENSNSUG00000018719) PRKD2 (ENSNSUG00000018720) ##17 ENSNSUG00000018722 DACT3 (ENSNSUG00000018723) GNG8 (ENSNSUG00000018724) PTGIR (ENSNSUG00000018725) PPP5C (ENSNSUG00000018726) ENSNSUG00000018727 SNRPD2 (ENSNSUG00000018728) ENSNSUG00000018729 ENSNSUG00000018730 SIX5 (ENSNSUG00000018731) ENSNSUG00000018732 Archelosauria ANCESTRAL SPECIES 33 ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478 ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b Archosauria ANCESTRAL SPECIES 90 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 Aves ANCESTRAL SPECIES 85 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 African ostrich MODERN SPECIES 950 AP2S1 (ENSSCUG00000017241) ##22 Neognathae ANCESTRAL SPECIES 49 ENSGT00940000160551 ENSGT00390000011275 ENSGT00940000162258.z ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 Galloanserae ANCESTRAL SPECIES 48 ENSGT00940000160011.h ENSGT00550000075007 ENSGT00530000063950.a.b ENSGT01100000263564.a ENSGT00940000158721 ENSGT00900000142292 ENSGT00940000164973 ENSGT00530000064222.a ENSGT00390000009795 ENSGT00940000156765 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 Phasianidae ANCESTRAL SPECIES 36 ENSGT00550000075007 ENSGT00530000063950.a.b ENSGT01100000263564.a ENSGT00940000158721 ENSGT00940000164973.b ENSGT00530000064222.a ENSGT00940000161850 ENSGT00940000157969 ENSGT00390000009795 ENSGT00940000156765 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 Japanese quail MODERN SPECIES 272 AP2S1 (ENSCJPG00005002909) ##22 FKRP (ENSCJPG00005002913) Phasianidae_b ANCESTRAL SPECIES 66 ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 Chicken MODERN SPECIES 31 SAE1 (ENSGALG00010008762) CCDC9 (ENSGALG00010008782) ENSGALG00010008814 ##26 DHX34 (ENSGALG00010008830) LRFN3 (ENSGALG00010008859) FBXO46 (ENSGALG00010008888) ENSGALG00010008903 OPA3 (ENSGALG00010008921) VASP (ENSGALG00010008932) ENSGALG00010008943 ENSGALG00010008952 PPP1R37 (ENSGALG00010008969) ENSGALG00010008983 ENSGALG00010008991 ARHGAP35 (ENSGALG00010009020) AP2S1 (ENSGALG00010010816) ##22 FKRP (ENSGALG00010010845) STRN4 (ENSGALG00010010862) ##21 ENSGALG00010010869 SNRPD2 (ENSGALG00010010885) Turkey MODERN SPECIES 1243 ENSMGAG00000021870 ##22 Neognathae_b ANCESTRAL SPECIES 46 ENSGT00940000160551 ENSGT00390000011275 ENSGT00940000162258.z ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00390000017583 Neognathae_c ANCESTRAL SPECIES 62 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00390000017583 Kakapo MODERN SPECIES 68 THAP8 (ENSSHBG00005014874) POLR2I (ENSSHBG00005014879) TBCB (ENSSHBG00005014890) ARHGAP35 (ENSSHBG00005014898) AP2S1 (ENSSHBG00005014905) ##22 FKRP (ENSSHBG00005014911) ACTMAP (ENSSHBG00005014916) SNRPA (ENSSHBG00005014922) RAB4B (ENSSHBG00005014929) AXL (ENSSHBG00005014939) ENSSHBG00005014950 HNRNPUL1 (ENSSHBG00005001118) CCDC97 (ENSSHBG00005001120) TGFB1 (ENSSHBG00005001122) B9D2 (ENSSHBG00005012949) EXOSC5 (ENSSHBG00005012977) BCKDHA (ENSSHBG00005013007) DMAC2 (ENSSHBG00005013024) ENSSHBG00005013034 NOP53 (ENSSHBG00005013043) Golden eagle MODERN SPECIES 60 ENSACCG00020016886 ARHGAP35 (ENSACCG00020016888) AP2S1 (ENSACCG00020016889) ##22 STRN4 (ENSACCG00020016893) ##21 TMEM160 (ENSACCG00020016895) TBCB (ENSACCG00020016897) POLR2I (ENSACCG00020016900) ENSACCG00020016901 THAP8 (ENSACCG00020016903) ENSACCG00020016906 Passeriformes ANCESTRAL SPECIES 61 ENSGT00950000182970.C ENSGT00940000160551 ENSGT00390000011275 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Passeriformes_d ANCESTRAL SPECIES 56 ENSGT00950000182970.C ENSGT00940000160551 ENSGT00390000011275 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Passeriformes_g ANCESTRAL SPECIES 76 ENSGT00950000182970.C ENSGT00940000160551 ENSGT00390000011275 ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Medium ground finch MODERN SPECIES 704 AP2S1 (ENSGFOG00000003979) ##22 Passeroidea ANCESTRAL SPECIES 79 ENSGT00950000182970.C ENSGT00940000160551 ENSGT00390000011275 ENSGT00940000157454 ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119.v ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 Common canary MODERN SPECIES 281 ENSSCAG00000007006 ##28 AP2S1 (ENSSCAG00000007009) ##22 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 80 ENSTGUG00000022790 ENSTGUG00000019881 ENSTGUG00000026751 ENSTGUG00000024854 ENSTGUG00000026770 ENSTGUG00000018785 ##28 AP2S1 (ENSTGUG00000027482) ##22 ENSTGUG00000022958 B9D2 (ENSTGUG00000027327) ENSTGUG00000021836 ENSTGUG00000022450 ENSTGUG00000024439 ENSTGUG00000022549 ENSTGUG00000019851 ENSTGUG00000021426 SPTBN4 (ENSTGUG00000026942) ENSTGUG00000019327 ENSTGUG00000023435 ENSTGUG00000015127 ##22 ENSTGUG00000017067 ##28 ENSTGUG00000000642 ENSTGUG00000025223 Zebra finch MODERN SPECIES 80 PPP1R13L (ENSTGUG00000029072) ERCC1 (ENSTGUG00000026421) ENSTGUG00000022148 ENSTGUG00000024482 ENSTGUG00000029551 CLASRP (ENSTGUG00000026126) ENSTGUG00000025743 ENSTGUG00000025049 ENSTGUG00000021279 ENSTGUG00000026453 ENSTGUG00000024195 ENSTGUG00000027729 ENSTGUG00000025223 ENSTGUG00000000642 ENSTGUG00000017067 ##28 ENSTGUG00000015127 ##22 ENSTGUG00000023435 ENSTGUG00000019327 SPTBN4 (ENSTGUG00000026942) ENSTGUG00000021426 ENSTGUG00000019851 ENSTGUG00000022549 ENSTGUG00000024439 ENSTGUG00000022450 ENSTGUG00000021836 B9D2 (ENSTGUG00000027327) ENSTGUG00000022958 AP2S1 (ENSTGUG00000027482) ##22 ENSTGUG00000018785 ##28 ENSTGUG00000026770 ENSTGUG00000024854 Cryptodira ANCESTRAL SPECIES 35 ENSGT00940000154550.b ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478 ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00960000193250 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b Chinese turtle MODERN SPECIES 787 ENSPSIG00000001108 TMEM160 (ENSPSIG00000008093) ARHGAP35 (ENSPSIG00000007433) AP2S1 (ENSPSIG00000007321) ##22 SLC1A5 (ENSPSIG00000006408) FKRP (ENSPSIG00000005846) STRN4 (ENSPSIG00000017359) ##21 PRKD2 (ENSPSIG00000016551) ##17 Testudinoidea ANCESTRAL SPECIES 30 ENSGT00940000164418 ENSGT00940000161957 ENSGT00940000155478.n ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ##22 ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183136.a.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b Emydidae ANCESTRAL SPECIES 45 ENSGT00940000154550.b ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478.m.a ENSGT00940000161957 ENSGT00940000155478.n ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ##22 ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183136.a.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00940000164310 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 Three-toed box turtle MODERN SPECIES 252 ENSTMTG00000006498 ENSTMTG00000006514 ALKBH6 (ENSTMTG00000006538) ENSTMTG00000006564 ENSTMTG00000006693 ENSTMTG00000006713 ENSTMTG00000006749 POLR2I (ENSTMTG00000006766) ENSTMTG00000006777 TBCB (ENSTMTG00000006797) ENSTMTG00000006812 ENSTMTG00000006820 ENSTMTG00000006831 ENSTMTG00000006847 ARHGAP35 (ENSTMTG00000006861) AP2S1 (ENSTMTG00000006878) ##22 ENSTMTG00000006896 ENSTMTG00000006909 FKRP (ENSTMTG00000006927) STRN4 (ENSTMTG00000006957) ##21 PRKD2 (ENSTMTG00000007272) ##17 ENSTMTG00000007750 ENSTMTG00000007764 GNG8 (ENSTMTG00000007787) PTGIR (ENSTMTG00000007799) PPP5C (ENSTMTG00000007809) HIF3A (ENSTMTG00000007833) ENSTMTG00000007849 SNRPD2 (ENSTMTG00000007862) ENSTMTG00000007873 ENSTMTG00000007894 painted turtle MODERN SPECIES 879 ENSCPBG00000006865 ENSCPBG00000006859 ENSCPBG00000006852 ALKBH6 (ENSCPBG00000006841) ENSCPBG00000006820 ENSCPBG00000006808 WDR62 (ENSCPBG00000006762) ENSCPBG00000006734 POLR2I (ENSCPBG00000006726) ENSCPBG00000006709 TBCB (ENSCPBG00000005327) ENSCPBG00000005289 TMEM160 (ENSCPBG00000005281) NPAS1 (ENSCPBG00000005264) ARHGAP35 (ENSCPBG00000005254) AP2S1 (ENSCPBG00000005245) ##22 Testudinidae ANCESTRAL SPECIES 36 ENSGT00940000154550.b ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478.m.a ENSGT00940000156844.a ENSGT00510000048626 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ##22 ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183136.a.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b Abingdon island giant tortoise MODERN SPECIES 1173 ATF1 (ENSCABG00000002483) ENSCABG00000002482 ENSCABG00000002481 ENSCABG00000002480 ARHGAP35 (ENSCABG00000002479) AP2S1 (ENSCABG00000002477) ##22 Goode s thornscrub tortoise MODERN SPECIES 134 ENSGEVG00005005946 ENSGEVG00005005983 ALKBH6 (ENSGEVG00005006054) CLIP3 (ENSGEVG00005006093) ENSGEVG00005006178 ENSGEVG00005006193 ENSGEVG00005006247 ENSGEVG00005006319 ENSGEVG00005006349 TBCB (ENSGEVG00005006394) ENSGEVG00005006415 ENSGEVG00005006429 TMEM160 (ENSGEVG00005006452) ENSGEVG00005006465 ARHGAP35 (ENSGEVG00005006490) AP2S1 (ENSGEVG00005006508) ##22 SLC1A5 (ENSGEVG00005006522) FKRP (ENSGEVG00005006541) STRN4 (ENSGEVG00005006716) ##21 PRKD2 (ENSGEVG00005007536) ##17 ENSGEVG00005007568 DACT3 (ENSGEVG00005007584) GNG8 (ENSGEVG00005007618) PTGIR (ENSGEVG00005007642) CALM3 (ENSGEVG00005007668) ENSGEVG00005007705 PPP5C (ENSGEVG00005007903) ENSGEVG00005008365 ENSGEVG00005008379 SNRPD2 (ENSGEVG00005008411) ENSGEVG00005008436 Mammalia ANCESTRAL SPECIES 75 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000171396 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00950000183135.A.a ENSGT00940000161740 Platypus MODERN SPECIES 16 KCNK6 (ENSOANG00000040689) YIF1B (ENSOANG00000042948) ENSOANG00000045122 PPP1R14A (ENSOANG00000049843) ENSOANG00000044784 SAE1 (ENSOANG00000004331) ENSOANG00000039018 CCDC9 (ENSOANG00000049974) ENSOANG00000012979 ENSOANG00000037837 DHX34 (ENSOANG00000000569) ENSOANG00000037686 TMEM160 (ENSOANG00000048641) ENSOANG00000040596 ARHGAP35 (ENSOANG00000003425) AP2S1 (ENSOANG00000047764) ##22 SLC1A5 (ENSOANG00000048663) FKRP (ENSOANG00000039322) STRN4 (ENSOANG00000049730) ##21 PRKD2 (ENSOANG00000049147) ##17 ENSOANG00000046092 ENSOANG00000041777 ENSOANG00000049385 ENSOANG00000036554 PPP5C (ENSOANG00000011946) ENSOANG00000038949 ENSOANG00000049441 NOVA2 (ENSOANG00000040576) ENSOANG00000042668 FOXA3 (ENSOANG00000042207) SYMPK (ENSOANG00000036849) Theria ANCESTRAL SPECIES 27 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Marsupialia ANCESTRAL SPECIES 20 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Opossum MODERN SPECIES 3 ZNF541 (ENSMODG00000008779) NAPA (ENSMODG00000008817) KPTN (ENSMODG00000008827) ENSMODG00000023716 SELENOW (ENSMODG00000023715) DHX34 (ENSMODG00000008850) C5AR2 (ENSMODG00000007252) ENSMODG00000008857 CCDC9 (ENSMODG00000008926) ENSMODG00000008934 SAE1 (ENSMODG00000008952) ZC3H4 (ENSMODG00000008978) TMEM160 (ENSMODG00000047936) NPAS1 (ENSMODG00000009053) ARHGAP35 (ENSMODG00000009066) AP2S1 (ENSMODG00000009083) ##22 SLC1A5 (ENSMODG00000009108) FKRP (ENSMODG00000023714) STRN4 (ENSMODG00000009136) ##21 DACT3 (ENSMODG00000047059) GNG8 (ENSMODG00000009206) PTGIR (ENSMODG00000009211) ENSMODG00000009222 PPP5C (ENSMODG00000009228) ENSMODG00000021137 ENSMODG00000006074 ENSMODG00000002676 ENSMODG00000002387 ENSMODG00000028671 ENSMODG00000002366 ENSMODG00000023690 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000002757 NOP53 (ENSSHAG00000023645) ENSSHAG00000026122 ZNF541 (ENSSHAG00000003056) NAPA (ENSSHAG00000022077) ENSSHAG00000024846 MEIS3 (ENSSHAG00000021311) ENSSHAG00000030420 ENSSHAG00000029825 C5AR2 (ENSSHAG00000027588) ENSSHAG00000001420 SAE1 (ENSSHAG00000002813) ZC3H4 (ENSSHAG00000028166) NPAS1 (ENSSHAG00000024261) ARHGAP35 (ENSSHAG00000006639) AP2S1 (ENSSHAG00000026500) ##22 SLC1A5 (ENSSHAG00000026042) PRKD2 (ENSSHAG00000021404) ##17 ENSSHAG00000025928 ENSSHAG00000020505 DACT3 (ENSSHAG00000031611) ENSSHAG00000030771 ENSSHAG00000028119 ENSSHAG00000004128 ENSSHAG00000003533 ENSSHAG00000024489 ENSSHAG00000025662 ENSSHAG00000028193 ENSSHAG00000022799 ENSSHAG00000016613 ENSSHAG00000023061 Diprotodontia ANCESTRAL SPECIES 58 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Wallaby MODERN SPECIES 14465 AP2S1 (ENSMEUG00000001062) ##22 Diprotodontia_a ANCESTRAL SPECIES 56 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1158 ZNF541 (ENSVURG00010002837) NAPA (ENSVURG00010002799) ENSVURG00010002786 SLC8A2 (ENSVURG00010002773) MEIS3 (ENSVURG00010022726) DHX34 (ENSVURG00010022703) C5AR2 (ENSVURG00010022700) ENSVURG00010022698 CCDC9 (ENSVURG00010022694) ENSVURG00010022689 ENSVURG00010022683 ENSVURG00010022671 ENSVURG00010022668 ENSVURG00010022660 ENSVURG00010022649 ENSVURG00010022632 ##22 ENSVURG00010022289 ENSVURG00010022272 ENSVURG00010022263 ##21 ENSVURG00010021751 ##17 ENSVURG00010021686 ENSVURG00010021679 ENSVURG00010021676 ENSVURG00010021665 ENSVURG00010021653 ENSVURG00010021638 ENSVURG00010021566 ENSVURG00010021545 ENSVURG00010021540 ENSVURG00010021538 ENSVURG00010021533 Common wonbat MODERN SPECIES 1158 ENSVURG00010011397 ENSVURG00010011360 ENSVURG00010011344 ENSVURG00010011325 ENSVURG00010011318 ENSVURG00010011314 ##22 ENSVURG00010010368 ENSVURG00010010327 ENSVURG00010007823 ##21 ENSVURG00010006016 ##17 ENSVURG00010005880 ENSVURG00010005864 ENSVURG00010005861 ENSVURG00010005854 ENSVURG00010004809 ENSVURG00010004727 ENSVURG00010004291 ENSVURG00010004245 ENSVURG00010004241 ENSVURG00010004231 ENSVURG00010004226 koala MODERN SPECIES 345 ZNF541 (ENSPCIG00000007543) NAPA (ENSPCIG00000016508) KPTN (ENSPCIG00000016494) SLC8A2 (ENSPCIG00000016491) MEIS3 (ENSPCIG00000016488) DHX34 (ENSPCIG00000000889) ENSPCIG00000000869 C5AR1 (ENSPCIG00000000822) CCDC9 (ENSPCIG00000028131) ENSPCIG00000028133 SAE1 (ENSPCIG00000028135) ZC3H4 (ENSPCIG00000028138) TMEM160 (ENSPCIG00000028139) NPAS1 (ENSPCIG00000032390) ARHGAP35 (ENSPCIG00000025775) ENSPCIG00000025776 ##22 SLC1A5 (ENSPCIG00000025777) FKRP (ENSPCIG00000025778) STRN4 (ENSPCIG00000025779) ##21 PRKD2 (ENSPCIG00000025780) ##17 DACT3 (ENSPCIG00000009348) GNG8 (ENSPCIG00000009350) PTGIR (ENSPCIG00000009351) CALM3 (ENSPCIG00000009353) PPP5C (ENSPCIG00000006141) HIF3A (ENSPCIG00000006138) ENSPCIG00000009955 ENSPCIG00000023945 Eutheria ANCESTRAL SPECIES 29 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B Atlantogenata ANCESTRAL SPECIES 48 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B Xenarthra ANCESTRAL SPECIES 1229 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 Armadillo MODERN SPECIES 3940 TMEM160 (ENSDNOG00000045086) NPAS1 (ENSDNOG00000035321) ARHGAP35 (ENSDNOG00000007757) AP2S1 (ENSDNOG00000046653) ##22 Afrotheria ANCESTRAL SPECIES 22 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 Afrotheria_a ANCESTRAL SPECIES 21 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 Elephant MODERN SPECIES 375 EHD2 (ENSLAFG00000029346) ENSLAFG00000023304 ENSLAFG00000015647 ZNF541 (ENSLAFG00000009287) NAPA (ENSLAFG00000009284) KPTN (ENSLAFG00000009281) MEIS3 (ENSLAFG00000031905) DHX34 (ENSLAFG00000003186) C5AR1 (ENSLAFG00000023333) CCDC9 (ENSLAFG00000026191) BBC3 (ENSLAFG00000008852) SAE1 (ENSLAFG00000001593) ZC3H4 (ENSLAFG00000001586) TMEM160 (ENSLAFG00000014543) ARHGAP35 (ENSLAFG00000018311) ENSLAFG00000026512 ##22 SLC1A5 (ENSLAFG00000000671) FKRP (ENSLAFG00000025662) STRN4 (ENSLAFG00000004220) ##21 PRKD2 (ENSLAFG00000021718) ##17 DACT3 (ENSLAFG00000000449) PTGIR (ENSLAFG00000021881) CALM3 (ENSLAFG00000001155) ENSLAFG00000009288 ENSLAFG00000029507 ENSLAFG00000030061 CCDC8 (ENSLAFG00000003049) PPP5C (ENSLAFG00000006728) HIF3A (ENSLAFG00000017230) IGFL1 (ENSLAFG00000030746) ENSLAFG00000028836 Hyrax MODERN SPECIES 2322 AP2S1 (ENSPCAG00000007191) ##22 Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Tree shrew MODERN SPECIES 5818 AP2S1 (ENSTBEG00000013807) ##22 ENSTBEG00000013687 SLC1A5 (ENSTBEG00000013471) ENSTBEG00000013134 STRN4 (ENSTBEG00000012704) ##21 Glires ANCESTRAL SPECIES 6 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Lagomorpha ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Pika MODERN SPECIES 634 ENSOPRG00000011472 ##22 Rodentia ANCESTRAL SPECIES 8 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Rodentia_B ANCESTRAL SPECIES 20 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 Kangaroo rat MODERN SPECIES 475 Bicra (ENSDORG00000025123) Zfp541 (ENSDORG00000028161) Napa (ENSDORG00000009995) ENSDORG00000009993 Slc8a2 (ENSDORG00000009991) Meis3 (ENSDORG00000008441) Dhx34 (ENSDORG00000008437) C5ar1 (ENSDORG00000030050) ENSDORG00000024050 ENSDORG00000029325 Sae1 (ENSDORG00000012199) Zc3h4 (ENSDORG00000002726) Tmem160 (ENSDORG00000002725) Npas1 (ENSDORG00000002722) Arhgap35 (ENSDORG00000001800) Ap2s1 (ENSDORG00000015282) ##22 Slc1a5 (ENSDORG00000008810) Strn4 (ENSDORG00000005407) ##21 Prkd2 (ENSDORG00000005405) ##17 ENSDORG00000005404 Gng8 (ENSDORG00000005403) Ptgir (ENSDORG00000005401) Calm3 (ENSDORG00000029756) Pnma8b (ENSDORG00000028483) ENSDORG00000023802 Ppp5c (ENSDORG00000004665) Hif3a (ENSDORG00000004664) Pglyrp1 (ENSDORG00000027993) Ccdc61 (ENSDORG00000010042) Nova2 (ENSDORG00000026568) Mypop (ENSDORG00000015093) Myomorpha ANCESTRAL SPECIES 20 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 Lesser Egyptian jerboa MODERN SPECIES 246 Inafm1 (ENSJJAG00000011485) Ccdc9 (ENSJJAG00000012491) Bbc3 (ENSJJAG00000016781) ENSJJAG00000017019 Zc3h4 (ENSJJAG00000019068) Tmem160 (ENSJJAG00000018203) Npas1 (ENSJJAG00000018354) Arhgap35 (ENSJJAG00000000272) Ap2s1 (ENSJJAG00000000379) ##22 ENSJJAG00000012064 Slc1a5 (ENSJJAG00000011796) Strn4 (ENSJJAG00000012202) ##21 Prkd2 (ENSJJAG00000013478) ##17 ENSJJAG00000015956 Gng8 (ENSJJAG00000016964) Ptgir (ENSJJAG00000017272) Calm3 (ENSJJAG00000017945) Pnma8b (ENSJJAG00000015410) Ppp5c (ENSJJAG00000015850) Hif3a (ENSJJAG00000017788) Muroidea ANCESTRAL SPECIES 18 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 Upper Galilee mountains blind mole rat MODERN SPECIES 501 Ap2s1 (ENSNGAG00000005409) ##22 Slc1a5 (ENSNGAG00000011745) Fkrp (ENSNGAG00000008074) Strn4 (ENSNGAG00000015472) ##21 Prkd2 (ENSNGAG00000009795) ##17 ENSNGAG00000014192 Gng8 (ENSNGAG00000015091) Ptgir (ENSNGAG00000015456) ENSNGAG00000004089 Pnma8b (ENSNGAG00000008913) Pnma8a (ENSNGAG00000008259) Ppp5c (ENSNGAG00000012794) Hif3a (ENSNGAG00000014207) Arhgap35 (ENSNGAG00000016819) Npas1 (ENSNGAG00000018097) Tmem160 (ENSNGAG00000019488) Muroidea_A ANCESTRAL SPECIES 20 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a Cricetidae ANCESTRAL SPECIES 29 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.b.a.b.a.b.b.a Cricetinae ANCESTRAL SPECIES 49 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.a ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.b.a.b.a.a Golden Hamster MODERN SPECIES 836 Slc8a2 (ENSMAUG00000010121) Meis3 (ENSMAUG00000014202) Dhx34 (ENSMAUG00000013394) C5ar2 (ENSMAUG00000006533) C5ar1 (ENSMAUG00000003322) ENSMAUG00000003963 Bbc3 (ENSMAUG00000009202) Sae1 (ENSMAUG00000007765) ENSMAUG00000000957 Zc3h4 (ENSMAUG00000000068) Tmem160 (ENSMAUG00000000893) Npas1 (ENSMAUG00000001894) Arhgap35 (ENSMAUG00000000172) ENSMAUG00000009227 ENSMAUG00000008055 Ap2s1 (ENSMAUG00000019505) ##22 Slc1a5 (ENSMAUG00000017083) Fkrp (ENSMAUG00000018831) Strn4 (ENSMAUG00000016627) ##21 Prkd2 (ENSMAUG00000005652) ##17 ENSMAUG00000017644 Ptgir (ENSMAUG00000011407) Calm3 (ENSMAUG00000011584) Pnma8b (ENSMAUG00000016505) Pnma8c (ENSMAUG00000014466) Ppp5c (ENSMAUG00000015105) Hif3a (ENSMAUG00000011784) ENSMAUG00000012799 Zfp566 (ENSMAUG00000011017) Zfp82 (ENSMAUG00000005535) Chinese hamster chok1gshd MODERN SPECIES 341 Meis3 (ENSCGRG00001010748) ENSCGRG00001017077 Dhx34 (ENSCGRG00001014694) C5ar2 (ENSCGRG00001013288) C5ar1 (ENSCGRG00001012882) Inafm1 (ENSCGRG00001010104) Ccdc9 (ENSCGRG00001007536) Bbc3 (ENSCGRG00001017224) Sae1 (ENSCGRG00001016314) Zc3h4 (ENSCGRG00001016116) Tmem160 (ENSCGRG00001014723) Npas1 (ENSCGRG00001013611) Arhgap35 (ENSCGRG00001013301) Ceacam15 (ENSCGRG00001017353) Ceacam9 (ENSCGRG00001017245) Ap2s1 (ENSCGRG00001015937) ##22 Slc1a5 (ENSCGRG00001014742) Strn4 (ENSCGRG00001002623) ##21 Prkd2 (ENSCGRG00001010601) ##17 Dact3 (ENSCGRG00001000117) Gng8 (ENSCGRG00001018981) Ptgir (ENSCGRG00001018220) Calm3 (ENSCGRG00001016779) Pnma8b (ENSCGRG00001016482) Pnma8a (ENSCGRG00001015613) Pnma8c (ENSCGRG00001014071) Ccdc8 (ENSCGRG00001014782) Ppp5c (ENSCGRG00001011160) Hif3a (ENSCGRG00001017993) ENSCGRG00001007855 ENSCGRG00001004123 Cricetidae_B ANCESTRAL SPECIES 60 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 Northern American deer mouse MODERN SPECIES Dhx34 (ENSPEMG00000017613) C5ar2 (ENSPEMG00000010321) C5ar1 (ENSPEMG00000001838) Inafm1 (ENSPEMG00000009541) Ccdc9 (ENSPEMG00000015166) Bbc3 (ENSPEMG00000014228) Sae1 (ENSPEMG00000012499) Zc3h4 (ENSPEMG00000009762) Tmem160 (ENSPEMG00000012479) Npas1 (ENSPEMG00000014696) Arhgap35 (ENSPEMG00000017349) ENSPEMG00000031358 Ceacam15 (ENSPEMG00000016683) ENSPEMG00000008534 Ceacam9 (ENSPEMG00000003127) Ap2s1 (ENSPEMG00000018089) ##22 Slc1a5 (ENSPEMG00000013763) Fkrp (ENSPEMG00000018445) Strn4 (ENSPEMG00000008347) ##21 Prkd2 (ENSPEMG00000016539) ##17 Dact3 (ENSPEMG00000016882) Gng8 (ENSPEMG00000015160) Ptgir (ENSPEMG00000016407) Calm3 (ENSPEMG00000027101) Pnma8b (ENSPEMG00000025557) Pnma8a (ENSPEMG00000006770) Ccdc8 (ENSPEMG00000012412) Ppp5c (ENSPEMG00000012984) Hif3a (ENSPEMG00000017981) Tmem86b (ENSPEMG00000028554) Ppp6r1 (ENSPEMG00000009931) Prairie vole MODERN SPECIES 354 Zfp541 (ENSMOCG00000021811) Napa (ENSMOCG00000006244) ENSMOCG00000013711 Slc8a2 (ENSMOCG00000005717) Meis3 (ENSMOCG00000008970) Dhx34 (ENSMOCG00000016843) C5ar2 (ENSMOCG00000004764) Ccdc9 (ENSMOCG00000020124) Bbc3 (ENSMOCG00000017283) ENSMOCG00000016346 Zc3h4 (ENSMOCG00000006492) Tmem160 (ENSMOCG00000016966) Npas1 (ENSMOCG00000014578) Arhgap35 (ENSMOCG00000015867) Ceacam9 (ENSMOCG00000018285) Ap2s1 (ENSMOCG00000019574) ##22 Slc1a5 (ENSMOCG00000009762) Fkrp (ENSMOCG00000022172) Strn4 (ENSMOCG00000000602) ##21 Prkd2 (ENSMOCG00000004684) ##17 Dact3 (ENSMOCG00000013361) Ptgir (ENSMOCG00000002747) Calm3 (ENSMOCG00000008052) Pnma8a (ENSMOCG00000007034) Ccdc8 (ENSMOCG00000020660) Ppp5c (ENSMOCG00000014089) Hif3a (ENSMOCG00000019473) Samd5 (ENSMOCG00000000312) Stxbp5 (ENSMOCG00000020656) Adgb (ENSMOCG00000022714) ENSMOCG00000017109 Murinae ANCESTRAL SPECIES 19 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b Rat MODERN SPECIES Dhx34 (ENSRNOG00000047575) AABR07002627.1 (ENSRNOG00000060587) C5ar2 (ENSRNOG00000049028) ENSRNOG00000066925 Inafm1 (ENSRNOG00000048848) Bbc3 (ENSRNOG00000062473) Sae1 (ENSRNOG00000015128) Zc3h4 (ENSRNOG00000015229) Tmem160 (ENSRNOG00000015304) Npas1 (ENSRNOG00000015376) Arhgap35 (ENSRNOG00000015852) Gng5 (ENSRNOG00000063636) LOC102550403 (ENSRNOG00000065825) LOC108349752 (ENSRNOG00000028617) Ceacam9 (ENSRNOG00000046915) Ap2s1 (ENSRNOG00000015865) ##22 LOC679748 (ENSRNOG00000034106) Slc1a5 (ENSRNOG00000015948) Fkrp (ENSRNOG00000016055) Strn4 (ENSRNOG00000016145) ##21 Prkd2 (ENSRNOG00000016434) ##17 Dact3 (ENSRNOG00000052256) Gng8 (ENSRNOG00000016701) Ptgir (ENSRNOG00000016756) Calm3 (ENSRNOG00000016770) Pnma8b (ENSRNOG00000016863) Pnma8a (ENSRNOG00000027944) Pnma8c (ENSRNOG00000063049) Ccdc8 (ENSRNOG00000027936) Ppp5c (ENSRNOG00000016907) Hif3a (ENSRNOG00000017198) Mus ANCESTRAL SPECIES ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b Shrew mouse MODERN SPECIES 10 Slc8a2 (MGP_PahariEiJ_G0021080) Meis3 (MGP_PahariEiJ_G0021081) Dhx34 (MGP_PahariEiJ_G0021082) C5ar2 (MGP_PahariEiJ_G0021083) C5ar1 (MGP_PahariEiJ_G0021084) Inafm1 (MGP_PahariEiJ_G0021085) Ccdc9 (MGP_PahariEiJ_G0021086) Bbc3 (MGP_PahariEiJ_G0021087) Sae1 (MGP_PahariEiJ_G0021088) Zc3h4 (MGP_PahariEiJ_G0021089) Tmem160 (MGP_PahariEiJ_G0021090) Npas1 (MGP_PahariEiJ_G0021091) Arhgap35 (MGP_PahariEiJ_G0021092) Ceacam15 (MGP_PahariEiJ_G0021093) Ceacam9 (MGP_PahariEiJ_G0021094) Ap2s1 (MGP_PahariEiJ_G0021095) ##22 Slc1a5 (MGP_PahariEiJ_G0021096) MGP_PahariEiJ_G0021097 Strn4 (MGP_PahariEiJ_G0021098) ##21 Prkd2 (MGP_PahariEiJ_G0021099) ##17 Dact3 (MGP_PahariEiJ_G0021100) Gng8 (MGP_PahariEiJ_G0021101) Ptgir (MGP_PahariEiJ_G0021102) Calm3 (MGP_PahariEiJ_G0021103) Pnma8b (MGP_PahariEiJ_G0021104) MGP_PahariEiJ_G0021105 MGP_PahariEiJ_G0021106 Ppp5c (MGP_PahariEiJ_G0021107) Hif3a (MGP_PahariEiJ_G0021108) Psg16 (MGP_PahariEiJ_G0021109) Psg29 (MGP_PahariEiJ_G0021110) Mus_A ANCESTRAL SPECIES 1 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b Ryukyu mouse MODERN SPECIES 16 Slc8a2 (MGP_CAROLIEiJ_G0029224) Meis3 (MGP_CAROLIEiJ_G0029225) Dhx34 (MGP_CAROLIEiJ_G0029226) C5ar2 (MGP_CAROLIEiJ_G0029227) C5ar1 (MGP_CAROLIEiJ_G0029228) Inafm1 (MGP_CAROLIEiJ_G0029229) Ccdc9 (MGP_CAROLIEiJ_G0029230) Bbc3 (MGP_CAROLIEiJ_G0029231) Sae1 (MGP_CAROLIEiJ_G0029232) MGP_CAROLIEiJ_G0029233 Tmem160 (MGP_CAROLIEiJ_G0029234) Npas1 (MGP_CAROLIEiJ_G0029235) Arhgap35 (MGP_CAROLIEiJ_G0029236) Ceacam15 (MGP_CAROLIEiJ_G0029237) Ceacam9 (MGP_CAROLIEiJ_G0029238) Ap2s1 (MGP_CAROLIEiJ_G0029239) ##22 Slc1a5 (MGP_CAROLIEiJ_G0029240) Fkrp (MGP_CAROLIEiJ_G0029241) Strn4 (MGP_CAROLIEiJ_G0029242) ##21 Prkd2 (MGP_CAROLIEiJ_G0029243) ##17 Dact3 (MGP_CAROLIEiJ_G0029244) Gng8 (MGP_CAROLIEiJ_G0029245) Ptgir (MGP_CAROLIEiJ_G0029246) Calm3 (MGP_CAROLIEiJ_G0029247) Pnma8b (MGP_CAROLIEiJ_G0029248) Pnma8a (MGP_CAROLIEiJ_G0029249) Ccdc8 (MGP_CAROLIEiJ_G0029250) Ppp5c (MGP_CAROLIEiJ_G0029251) Hif3a (MGP_CAROLIEiJ_G0029252) Psg16 (MGP_CAROLIEiJ_G0029253) MGP_CAROLIEiJ_G0029254 Mus_B ANCESTRAL SPECIES ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b Mouse MODERN SPECIES 16 Slc8a2 (ENSMUSG00000030376) Meis3 (ENSMUSG00000041420) Dhx34 (ENSMUSG00000006019) C5ar2 (ENSMUSG00000074361) C5ar1 (ENSMUSG00000049130) Inafm1 (ENSMUSG00000091811) Ccdc9 (ENSMUSG00000041375) Bbc3 (ENSMUSG00000002083) Sae1 (ENSMUSG00000052833) Zc3h4 (ENSMUSG00000059273) Tmem160 (ENSMUSG00000019158) Npas1 (ENSMUSG00000001988) Arhgap35 (ENSMUSG00000058230) Ceacam15 (ENSMUSG00000078795) Ceacam9 (ENSMUSG00000007209) Ap2s1 (ENSMUSG00000008036) ##22 Slc1a5 (ENSMUSG00000001918) Fkrp (ENSMUSG00000048920) Strn4 (ENSMUSG00000030374) ##21 Prkd2 (ENSMUSG00000041187) ##17 Dact3 (ENSMUSG00000078794) Gng8 (ENSMUSG00000063594) Ptgir (ENSMUSG00000043017) Calm3 (ENSMUSG00000019370) Pnma8b (ENSMUSG00000070802) Pnma8a (ENSMUSG00000041141) Pnma8c (ENSMUSG00000108348) Ccdc8 (ENSMUSG00000041117) Ppp5c (ENSMUSG00000003099) Hif3a (ENSMUSG00000004328) Psg16 (ENSMUSG00000066760) Mus_C ANCESTRAL SPECIES 15 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b spretus MODERN SPECIES 16 Kptn (MGP_SPRETEiJ_G0030303) Slc8a2 (MGP_SPRETEiJ_G0030304) Dhx34 (MGP_SPRETEiJ_G0030305) C5ar2 (MGP_SPRETEiJ_G0030306) C5ar1 (MGP_SPRETEiJ_G0030307) Inafm1 (MGP_SPRETEiJ_G0030308) Ccdc9 (MGP_SPRETEiJ_G0030309) Bbc3 (MGP_SPRETEiJ_G0030310) Sae1 (MGP_SPRETEiJ_G0030311) Zc3h4 (MGP_SPRETEiJ_G0030312) Tmem160 (MGP_SPRETEiJ_G0030313) Npas1 (MGP_SPRETEiJ_G0030314) Arhgap35 (MGP_SPRETEiJ_G0030315) Ceacam15 (MGP_SPRETEiJ_G0030316) Ceacam9 (MGP_SPRETEiJ_G0030317) Ap2s1 (MGP_SPRETEiJ_G0030318) ##22 Slc1a5 (MGP_SPRETEiJ_G0030319) Fkrp (MGP_SPRETEiJ_G0030320) Strn4 (MGP_SPRETEiJ_G0030321) ##21 Prkd2 (MGP_SPRETEiJ_G0030322) ##17 Dact3 (MGP_SPRETEiJ_G0030323) Gng8 (MGP_SPRETEiJ_G0030324) Ptgir (MGP_SPRETEiJ_G0030325) Calm3 (MGP_SPRETEiJ_G0030326) Pnma8b (MGP_SPRETEiJ_G0030327) Pnma8a (MGP_SPRETEiJ_G0030328) Ccdc8 (MGP_SPRETEiJ_G0030329) Ppp5c (MGP_SPRETEiJ_G0030330) Hif3a (MGP_SPRETEiJ_G0030331) MGP_SPRETEiJ_G0030332 Ceacam3 (MGP_SPRETEiJ_G0030333) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2772 Slc8a2 (ENSMSIG00000018129) Meis3 (ENSMSIG00000018072) Dhx34 (ENSMSIG00000017946) C5ar2 (ENSMSIG00000017934) C5ar1 (ENSMSIG00000017926) Ccdc9 (ENSMSIG00000017868) ENSMSIG00000017856 Sae1 (ENSMSIG00000017811) Zc3h4 (ENSMSIG00000017751) Tmem160 (ENSMSIG00000017740) Npas1 (ENSMSIG00000017698) Arhgap35 (ENSMSIG00000017677) ENSMSIG00000017666 Ceacam15 (ENSMSIG00000017658) ENSMSIG00000017649 ENSMSIG00000017638 ##22 Steppe mouse MODERN SPECIES 2872 ENSMSIG00000004185 ENSMSIG00000004148 Tnip3 (ENSMSIG00000004021) ENSMSIG00000004013 Ndnf (ENSMSIG00000003987) ENSMSIG00000003978 ##22 ENSMSIG00000003900 4930544G11Rik (ENSMSIG00000003886) ENSMSIG00000003860 ENSMSIG00000003837 Mad2l1 (ENSMSIG00000003777) Vmn1r32 (ENSMSIG00000003768) Vmn1r33 (ENSMSIG00000003765) Vmn1r34 (ENSMSIG00000003740) Vmn1r35 (ENSMSIG00000003722) ENSMSIG00000003614 Vmn1r39 (ENSMSIG00000003551) Rodentia_A ANCESTRAL SPECIES 6 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 Naked mole-rat female MODERN SPECIES 21 ZNF541 (ENSHGLG00000017589) NAPA (ENSHGLG00000017294) KPTN (ENSHGLG00000013757) SLC8A2 (ENSHGLG00000017722) MEIS3 (ENSHGLG00000018600) DHX34 (ENSHGLG00000004917) C5AR2 (ENSHGLG00000045362) C5AR1 (ENSHGLG00000005545) CCDC9 (ENSHGLG00000006240) BBC3 (ENSHGLG00000050947) SAE1 (ENSHGLG00000007950) ZC3H4 (ENSHGLG00000008600) TMEM160 (ENSHGLG00000009284) NPAS1 (ENSHGLG00000009357) ARHGAP35 (ENSHGLG00000010970) AP2S1 (ENSHGLG00000018471) ##22 SLC1A5 (ENSHGLG00000013744) FKRP (ENSHGLG00000017783) STRN4 (ENSHGLG00000015771) ##21 PRKD2 (ENSHGLG00000017425) ##17 DACT3 (ENSHGLG00000047496) ENSHGLG00000034612 PTGIR (ENSHGLG00000007145) Calm3 (ENSHGLG00000007790) ENSHGLG00000009135 PNMA8A (ENSHGLG00000013517) ENSHGLG00000009334 CCDC8 (ENSHGLG00000048973) ENSHGLG00000015987 HIF3A (ENSHGLG00000015903) ENSHGLG00000032378 Hystricomorpha_a ANCESTRAL SPECIES 39 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Guinea pig MODERN SPECIES 80 ZNF541 (ENSCPOG00000020622) NAPA (ENSCPOG00000010617) KPTN (ENSCPOG00000010615) SLC8A2 (ENSCPOG00000010035) MEIS3 (ENSCPOG00000026589) DHX34 (ENSCPOG00000006510) C5AR2 (ENSCPOG00000010536) C5AR1 (ENSCPOG00000030913) INAFM1 (ENSCPOG00000034661) ENSCPOG00000008209 SAE1 (ENSCPOG00000021581) ZC3H4 (ENSCPOG00000036659) TMEM160 (ENSCPOG00000015280) NPAS1 (ENSCPOG00000023069) ARHGAP35 (ENSCPOG00000013236) AP2S1 (ENSCPOG00000026801) ##22 SLC1A5 (ENSCPOG00000004326) FKRP (ENSCPOG00000036590) STRN4 (ENSCPOG00000001053) ##21 PRKD2 (ENSCPOG00000003294) ##17 DACT3 (ENSCPOG00000022203) GNG8 (ENSCPOG00000031647) PTGIR (ENSCPOG00000034773) CALM3 (ENSCPOG00000029998) ENSCPOG00000027577 PNMA8A (ENSCPOG00000011877) GPATCH1 (ENSCPOG00000024477) PPP5C (ENSCPOG00000023554) HIF3A (ENSCPOG00000024199) ENSCPOG00000024181 PGLYRP1 (ENSCPOG00000032784) Hystricomorpha_b ANCESTRAL SPECIES 49 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 Long-tailed chinchilla MODERN SPECIES 281 ZNF541 (ENSCLAG00000001489) NAPA (ENSCLAG00000001379) KPTN (ENSCLAG00000001346) SLC8A2 (ENSCLAG00000000972) MEIS3 (ENSCLAG00000000719) DHX34 (ENSCLAG00000000906) C5AR1 (ENSCLAG00000001064) ENSCLAG00000000680 BBC3 (ENSCLAG00000000578) SAE1 (ENSCLAG00000000507) ENSCLAG00000000483 ZC3H4 (ENSCLAG00000001032) TMEM160 (ENSCLAG00000000918) NPAS1 (ENSCLAG00000000717) ARHGAP35 (ENSCLAG00000002385) AP2S1 (ENSCLAG00000002250) ##22 ENSCLAG00000002077 FKRP (ENSCLAG00000001845) STRN4 (ENSCLAG00000001542) ##21 PRKD2 (ENSCLAG00000001395) ##17 ENSCLAG00000001276 GNG8 (ENSCLAG00000004399) PTGIR (ENSCLAG00000004207) CALM3 (ENSCLAG00000003822) ENSCLAG00000003395 ENSCLAG00000002763 PPP5C (ENSCLAG00000001548) HIF3A (ENSCLAG00000001139) PGLYRP1 (ENSCLAG00000001072) ENSCLAG00000001044 ENSCLAG00000000991 Degu MODERN SPECIES 238 BICRA (ENSODEG00000009243) ZNF541 (ENSODEG00000005850) NAPA (ENSODEG00000008511) ENSODEG00000009127 SLC8A2 (ENSODEG00000007313) MEIS3 (ENSODEG00000006485) DHX34 (ENSODEG00000006333) ENSODEG00000008542 ENSODEG00000009476 BBC3 (ENSODEG00000006470) ENSODEG00000006581 ZC3H4 (ENSODEG00000008320) TMEM160 (ENSODEG00000009538) NPAS1 (ENSODEG00000006878) ARHGAP35 (ENSODEG00000007178) AP2S1 (ENSODEG00000006649) ##22 SLC1A5 (ENSODEG00000007341) FKRP (ENSODEG00000019605) STRN4 (ENSODEG00000009103) ##21 PRKD2 (ENSODEG00000006559) ##17 ENSODEG00000006767 GNG8 (ENSODEG00000007360) PTGIR (ENSODEG00000007904) CALM3 (ENSODEG00000008486) PNMA8A (ENSODEG00000006429) ENSODEG00000006634 GPATCH1 (ENSODEG00000007103) PPP5C (ENSODEG00000008796) HIF3A (ENSODEG00000007136) PGLYRP1 (ENSODEG00000006980) CCDC61 (ENSODEG00000007872) Sciuridae ANCESTRAL SPECIES 5 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B.p.b.a.b.a.b Marmotini ANCESTRAL SPECIES 7 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.p.a.a ENSGT00390000009557.B.p.a.b Alpin marmot MODERN SPECIES 45 BICRA (ENSMMMG00000013156) ZNF541 (ENSMMMG00000013251) NAPA (ENSMMMG00000013273) KPTN (ENSMMMG00000013277) SLC8A2 (ENSMMMG00000013339) MEIS3 (ENSMMMG00000013369) DHX34 (ENSMMMG00000013402) C5AR2 (ENSMMMG00000013488) C5AR1 (ENSMMMG00000013493) CCDC9 (ENSMMMG00000013499) SAE1 (ENSMMMG00000013566) ZC3H4 (ENSMMMG00000013587) ENSMMMG00000013602 NPAS1 (ENSMMMG00000013606) ARHGAP35 (ENSMMMG00000013646) AP2S1 (ENSMMMG00000013659) ##22 SLC1A5 (ENSMMMG00000013678) FKRP (ENSMMMG00000013696) STRN4 (ENSMMMG00000013698) ##21 PRKD2 (ENSMMMG00000013741) ##17 ENSMMMG00000013782 GNG8 (ENSMMMG00000013789) PTGIR (ENSMMMG00000013798) CALM3 (ENSMMMG00000013799) CCDC8 (ENSMMMG00000013809) PNMA8C (ENSMMMG00000013814) PNMA8A (ENSMMMG00000013817) PPP5C (ENSMMMG00000013822) HIF3A (ENSMMMG00000013829) ENSMMMG00000013847 ENSMMMG00000013856 Marmotini_b ANCESTRAL SPECIES 22 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.p.a.a ENSGT00390000009557.B.p.a.b Arctic ground squirrel MODERN SPECIES 455 NAPA (ENSUPAG00010010015) KPTN (ENSUPAG00010010006) SLC8A2 (ENSUPAG00010009969) MEIS3 (ENSUPAG00010009940) DHX34 (ENSUPAG00010009871) C5AR2 (ENSUPAG00010009867) C5AR1 (ENSUPAG00010009863) INAFM1 (ENSUPAG00010009857) CCDC9 (ENSUPAG00010009846) BBC3 (ENSUPAG00010009844) SAE1 (ENSUPAG00010009824) ZC3H4 (ENSUPAG00010009793) TMEM160 (ENSUPAG00010009790) NPAS1 (ENSUPAG00010009764) ARHGAP35 (ENSUPAG00010009739) AP2S1 (ENSUPAG00010009722) ##22 SLC1A5 (ENSUPAG00010009701) STRN4 (ENSUPAG00010009670) ##21 PRKD2 (ENSUPAG00010009657) ##17 DACT3 (ENSUPAG00010009628) GNG8 (ENSUPAG00010009624) PTGIR (ENSUPAG00010009623) CALM3 (ENSUPAG00010009609) CCDC8 (ENSUPAG00010009586) PNMA8C (ENSUPAG00010009585) PNMA8A (ENSUPAG00010009574) PPP5C (ENSUPAG00010009565) HIF3A (ENSUPAG00010009552) ENSUPAG00010009547 ENSUPAG00010009542 ENSUPAG00010009534 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 8 NAPA (ENSSVLG00005012991) KPTN (ENSSVLG00005012899) SLC8A2 (ENSSVLG00005012674) MEIS3 (ENSSVLG00005012542) DHX34 (ENSSVLG00005012498) C5AR2 (ENSSVLG00005012478) C5AR1 (ENSSVLG00005012437) ENSSVLG00005012324 CCDC9 (ENSSVLG00005012213) BBC3 (ENSSVLG00005012098) SAE1 (ENSSVLG00005011951) ZC3H4 (ENSSVLG00005011727) TMEM160 (ENSSVLG00005011672) NPAS1 (ENSSVLG00005011606) ARHGAP35 (ENSSVLG00005011555) AP2S1 (ENSSVLG00005011272) ##22 ENSSVLG00005011219 SLC1A5 (ENSSVLG00005010966) FKRP (ENSSVLG00005010926) STRN4 (ENSSVLG00005010641) ##21 PRKD2 (ENSSVLG00005010378) ##17 DACT3 (ENSSVLG00005010336) GNG8 (ENSSVLG00005010305) PTGIR (ENSSVLG00005010260) CALM3 (ENSSVLG00005025029) PNMA8A (ENSSVLG00005024983) PNMA8C (ENSSVLG00005024965) CCDC8 (ENSSVLG00005024952) PPP5C (ENSSVLG00005024922) HIF3A (ENSSVLG00005024854) IGFL1 (ENSSVLG00005024741) Eurasian red squirrel MODERN SPECIES 8 PTGIR (ENSSVLG00005010260) CALM3 (ENSSVLG00005025029) PNMA8A (ENSSVLG00005024983) PNMA8C (ENSSVLG00005024965) CCDC8 (ENSSVLG00005024952) PPP5C (ENSSVLG00005024922) HIF3A (ENSSVLG00005024854) IGFL1 (ENSSVLG00005024741) ENSSVLG00005024716 ENSSVLG00005024690 ENSSVLG00005024665 ENSSVLG00005024643 ENSSVLG00005024617 ENSSVLG00005024595 ENSSVLG00005024573 ENSSVLG00005024560 ##22 ENSSVLG00005024545 ENSSVLG00005024520 ENSSVLG00005024476 ENSSVLG00005024415 PGLYRP1 (ENSSVLG00005024391) CCDC61 (ENSSVLG00005024368) NOVA2 (ENSSVLG00005024343) ENSSVLG00005024334 NANOS2 (ENSSVLG00005024317) MYPOP (ENSSVLG00005024286) IRF2BP1 (ENSSVLG00005024265) FOXA3 (ENSSVLG00005024238) SYMPK (ENSSVLG00005024212) RSPH6A (ENSSVLG00005024118) ENSSVLG00005024059 Primates ANCESTRAL SPECIES 15 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Strepsirrhini ANCESTRAL SPECIES 16 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000170636 ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 Lemuriformes ANCESTRAL SPECIES 15 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 Mouse lemur MODERN SPECIES 14 BICRA (ENSMICG00000028080) ZNF541 (ENSMICG00000017737) NAPA (ENSMICG00000011599) KPTN (ENSMICG00000026946) SLC8A2 (ENSMICG00000030836) MEIS3 (ENSMICG00000031566) DHX34 (ENSMICG00000011585) C5AR1 (ENSMICG00000045174) CCDC9 (ENSMICG00000008823) ENSMICG00000008820 SAE1 (ENSMICG00000008807) ZC3H4 (ENSMICG00000008786) TMEM160 (ENSMICG00000035539) NPAS1 (ENSMICG00000006346) ARHGAP35 (ENSMICG00000037921) AP2S1 (ENSMICG00000038528) ##22 SLC1A5 (ENSMICG00000000030) FKRP (ENSMICG00000043598) STRN4 (ENSMICG00000015400) ##21 PRKD2 (ENSMICG00000015377) ##17 DACT3 (ENSMICG00000042964) GNG8 (ENSMICG00000011920) PTGIR (ENSMICG00000029447) CALM3 (ENSMICG00000028969) PNMA8A (ENSMICG00000008321) PPP5C (ENSMICG00000031666) HIF3A (ENSMICG00000016033) IGFL1 (ENSMICG00000028260) PGLYRP1 (ENSMICG00000033644) CCDC61 (ENSMICG00000003511) NOVA2 (ENSMICG00000028720) Lemuriformes_a ANCESTRAL SPECIES 5 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B Coquerels sifaka MODERN SPECIES 568 EHD2 (ENSPCOG00000010027) BICRA (ENSPCOG00000017166) ZNF541 (ENSPCOG00000006138) NAPA (ENSPCOG00000014946) KPTN (ENSPCOG00000022678) SLC8A2 (ENSPCOG00000023795) MEIS3 (ENSPCOG00000024690) DHX34 (ENSPCOG00000027801) CCDC9 (ENSPCOG00000020816) ENSPCOG00000019970 SAE1 (ENSPCOG00000018619) ZC3H4 (ENSPCOG00000017169) TMEM160 (ENSPCOG00000028665) NPAS1 (ENSPCOG00000017882) ARHGAP35 (ENSPCOG00000015788) AP2S1 (ENSPCOG00000022192) ##22 SLC1A5 (ENSPCOG00000024625) FKRP (ENSPCOG00000008360) STRN4 (ENSPCOG00000028165) ##21 PRKD2 (ENSPCOG00000018544) ##17 DACT3 (ENSPCOG00000024045) GNG8 (ENSPCOG00000014293) PTGIR (ENSPCOG00000022780) CALM3 (ENSPCOG00000017236) PNMA8B (ENSPCOG00000020660) ENSPCOG00000021687 PNMA8A (ENSPCOG00000025636) ENSPCOG00000019586 HIF3A (ENSPCOG00000022775) IGFL1 (ENSPCOG00000013757) PGLYRP1 (ENSPCOG00000027266) Greater bamboo lemur MODERN SPECIES 967 ARHGAP35 (ENSPSMG00000007009) AP2S1 (ENSPSMG00000006938) ##22 SLC1A5 (ENSPSMG00000006768) FKRP (ENSPSMG00000006706) STRN4 (ENSPSMG00000006556) ##21 PRKD2 (ENSPSMG00000006485) ##17 DACT3 (ENSPSMG00000006455) GNG8 (ENSPSMG00000006435) PTGIR (ENSPSMG00000006434) CALM3 (ENSPSMG00000006412) PNMA8B (ENSPSMG00000006398) PNMA8C (ENSPSMG00000006395) PNMA8A (ENSPSMG00000006391) PPP5C (ENSPSMG00000006234) HIF3A (ENSPSMG00000006129) IGFL1 (ENSPSMG00000006068) ENSPSMG00000006057 Bushbaby MODERN SPECIES 267 NAPA (ENSOGAG00000032621) KPTN (ENSOGAG00000009999) SLC8A2 (ENSOGAG00000029237) MEIS3 (ENSOGAG00000002063) DHX34 (ENSOGAG00000002061) C5AR2 (ENSOGAG00000033946) C5AR1 (ENSOGAG00000000133) INAFM1 (ENSOGAG00000029523) CCDC9 (ENSOGAG00000015701) BBC3 (ENSOGAG00000034738) SAE1 (ENSOGAG00000007650) ZC3H4 (ENSOGAG00000031123) TMEM160 (ENSOGAG00000033520) NPAS1 (ENSOGAG00000012829) ARHGAP35 (ENSOGAG00000033334) AP2S1 (ENSOGAG00000033467) ##22 SLC1A5 (ENSOGAG00000033704) FKRP (ENSOGAG00000026248) STRN4 (ENSOGAG00000015276) ##21 PRKD2 (ENSOGAG00000007550) ##17 DACT3 (ENSOGAG00000030948) GNG8 (ENSOGAG00000029514) PTGIR (ENSOGAG00000030472) CALM3 (ENSOGAG00000014764) PNMA8B (ENSOGAG00000028036) CCDC8 (ENSOGAG00000007549) ENSOGAG00000031114 PPP5C (ENSOGAG00000015987) HIF3A (ENSOGAG00000008187) ENSOGAG00000032211 PGLYRP1 (ENSOGAG00000007305) Haplorrhini ANCESTRAL SPECIES 16 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Tarsier MODERN SPECIES 5492 ARHGAP35 (ENSTSYG00000006365) AP2S1 (ENSTSYG00000008474) ##22 Simiiformes ANCESTRAL SPECIES 16 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Platyrrhini ANCESTRAL SPECIES 20 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c Mas night monkey MODERN SPECIES 1284 KPTN (ENSANAG00000030248) SLC8A2 (ENSANAG00000033218) ENSANAG00000034504 MEIS3 (ENSANAG00000037100) DHX34 (ENSANAG00000038287) C5AR1 (ENSANAG00000031163) INAFM1 (ENSANAG00000035853) CCDC9 (ENSANAG00000020361) ENSANAG00000037922 SAE1 (ENSANAG00000023379) ZC3H4 (ENSANAG00000023963) TMEM160 (ENSANAG00000026707) NPAS1 (ENSANAG00000036771) ARHGAP35 (ENSANAG00000000237) ENSANAG00000022565 AP2S1 (ENSANAG00000024767) ##22 SLC1A5 (ENSANAG00000021437) FKRP (ENSANAG00000019314) STRN4 (ENSANAG00000032421) ##21 PRKD2 (ENSANAG00000031053) ##17 DACT3 (ENSANAG00000031822) GNG8 (ENSANAG00000023974) PTGIR (ENSANAG00000030542) CALM3 (ENSANAG00000035148) PNMA8A (ENSANAG00000029356) CCDC8 (ENSANAG00000027675) PPP5C (ENSANAG00000038336) HIF3A (ENSANAG00000036285) ENSANAG00000005209 IGFL1 (ENSANAG00000034626) PGLYRP1 (ENSANAG00000036439) Cebidae ANCESTRAL SPECIES 8 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c Cebidae_a ANCESTRAL SPECIES 20 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c ENSGT00940000161006 ENSGT00940000154133.B Capuchin MODERN SPECIES 266 ZNF541 (ENSCCAG00000037140) NAPA (ENSCCAG00000033321) KPTN (ENSCCAG00000027753) SLC8A2 (ENSCCAG00000014965) MEIS3 (ENSCCAG00000003816) DHX34 (ENSCCAG00000028675) C5AR1 (ENSCCAG00000035091) CCDC9 (ENSCCAG00000028908) ENSCCAG00000026596 SAE1 (ENSCCAG00000031780) ZC3H4 (ENSCCAG00000037597) TMEM160 (ENSCCAG00000031011) NPAS1 (ENSCCAG00000032406) ENSCCAG00000021097 ARHGAP35 (ENSCCAG00000022601) AP2S1 (ENSCCAG00000028431) ##22 SLC1A5 (ENSCCAG00000033717) FKRP (ENSCCAG00000015087) STRN4 (ENSCCAG00000034066) ##21 PRKD2 (ENSCCAG00000032043) ##17 DACT3 (ENSCCAG00000008006) GNG8 (ENSCCAG00000029845) PTGIR (ENSCCAG00000021110) ENSCCAG00000033630 Bolivian squirrel monkey MODERN SPECIES 169 BICRA (ENSSBOG00000022848) ZNF541 (ENSSBOG00000022783) NAPA (ENSSBOG00000035455) KPTN (ENSSBOG00000027367) SLC8A2 (ENSSBOG00000033085) ENSSBOG00000026965 DHX34 (ENSSBOG00000026147) C5AR1 (ENSSBOG00000035229) CCDC9 (ENSSBOG00000030220) BBC3 (ENSSBOG00000022164) SAE1 (ENSSBOG00000021374) ZC3H4 (ENSSBOG00000030914) TMEM160 (ENSSBOG00000029169) NPAS1 (ENSSBOG00000033921) ARHGAP35 (ENSSBOG00000001405) AP2S1 (ENSSBOG00000032625) ##22 SLC1A5 (ENSSBOG00000030282) FKRP (ENSSBOG00000019333) STRN4 (ENSSBOG00000023134) ##21 PRKD2 (ENSSBOG00000035342) ##17 DACT3 (ENSSBOG00000033658) GNG8 (ENSSBOG00000031506) PTGIR (ENSSBOG00000035755) CALM3 (ENSSBOG00000028097) PNMA8A (ENSSBOG00000010196) PPP5C (ENSSBOG00000034724) HIF3A (ENSSBOG00000032075) ENSSBOG00000025247 ENSSBOG00000034581 IGFL1 (ENSSBOG00000027173) PGLYRP1 (ENSSBOG00000027039) Marmoset MODERN SPECIES 14 SLC8A2 (ENSCJAG00000070619) MEIS3 (ENSCJAG00000011475) DHX34 (ENSCJAG00000011504) ENSCJAG00000072119 C5AR2 (ENSCJAG00000011534) C5AR1 (ENSCJAG00000073054) INAFM1 (ENSCJAG00000074475) CCDC9 (ENSCJAG00000011548) ENSCJAG00000083080 SAE1 (ENSCJAG00000011565) ZC3H4 (ENSCJAG00000011601) TMEM160 (ENSCJAG00000082760) NPAS1 (ENSCJAG00000076811) ARHGAP35 (ENSCJAG00000011701) ENSCJAG00000072578 ENSCJAG00000011710 ##22 SLC1A5 (ENSCJAG00000011717) FKRP (ENSCJAG00000011741) STRN4 (ENSCJAG00000011749) ##21 PRKD2 (ENSCJAG00000047142) ##17 DACT3 (ENSCJAG00000042823) GNG8 (ENSCJAG00000011841) PTGIR (ENSCJAG00000011850) CALM3 (ENSCJAG00000078405) PNMA8B (ENSCJAG00000011875) PNMA8C (ENSCJAG00000075292) CCDC8 (ENSCJAG00000074769) PPP5C (ENSCJAG00000011891) HIF3A (ENSCJAG00000012019) ENSCJAG00000022850 IGFL1 (ENSCJAG00000012086) Catarrhini ANCESTRAL SPECIES ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Hominoidea ANCESTRAL SPECIES ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 Gibbon MODERN SPECIES 7 ENSNLEG00000031845 KPTN (ENSNLEG00000003092) ENSNLEG00000003082 MEIS3 (ENSNLEG00000003031) DHX34 (ENSNLEG00000003010) C5AR1 (ENSNLEG00000018412) INAFM1 (ENSNLEG00000018411) CCDC9 (ENSNLEG00000002990) ENSNLEG00000018410 ENSNLEG00000002975 SAE1 (ENSNLEG00000002965) ZC3H4 (ENSNLEG00000034259) TMEM160 (ENSNLEG00000002960) NPAS1 (ENSNLEG00000002946) ARHGAP35 (ENSNLEG00000002923) AP2S1 (ENSNLEG00000002895) ##22 ENSNLEG00000029695 ENSNLEG00000035781 STRN4 (ENSNLEG00000002817) ##21 ENSNLEG00000002792 ##17 ENSNLEG00000032967 GNG8 (ENSNLEG00000002788) PTGIR (ENSNLEG00000002780) CALM3 (ENSNLEG00000002752) ENSNLEG00000002751 PNMA8B (ENSNLEG00000002750) PNMA8A (ENSNLEG00000002749) PNMA8C (ENSNLEG00000030454) ENSNLEG00000030898 ENSNLEG00000002747 PPP5C (ENSNLEG00000002629) Hominidae ANCESTRAL SPECIES ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 Orangutan MODERN SPECIES 10 ZNF541 (ENSPPYG00000010178) NAPA (ENSPPYG00000010177) KPTN (ENSPPYG00000010176) SLC8A2 (ENSPPYG00000010175) MEIS3 (ENSPPYG00000010173) DHX34 (ENSPPYG00000010172) C5AR2 (ENSPPYG00000010171) C5AR1 (ENSPPYG00000032120) CCDC9 (ENSPPYG00000010170) ENSPPYG00000010169 SAE1 (ENSPPYG00000010168) ZC3H4 (ENSPPYG00000010167) TMEM160 (ENSPPYG00000032917) NPAS1 (ENSPPYG00000010165) ARHGAP35 (ENSPPYG00000010164) AP2S1 (ENSPPYG00000010163) ##22 SLC1A5 (ENSPPYG00000010161) FKRP (ENSPPYG00000010160) STRN4 (ENSPPYG00000010159) ##21 PRKD2 (ENSPPYG00000010158) ##17 DACT3 (ENSPPYG00000010157) PTGIR (ENSPPYG00000010155) CALM3 (ENSPPYG00000010154) ENSPPYG00000031172 PNMA8B (ENSPPYG00000010152) PNMA8A (ENSPPYG00000035419) PNMA8C (ENSPPYG00000037781) CCDC8 (ENSPPYG00000010150) PPP5C (ENSPPYG00000010148) HIF3A (ENSPPYG00000010147) IGFL1 (ENSPPYG00000040323) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 Homo/Pan group ANCESTRAL SPECIES ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 Pan ANCESTRAL SPECIES 9 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00910000148361 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 Chimpanzee MODERN SPECIES 10 NAPA (ENSPTRG00000011211) KPTN (ENSPTRG00000011210) SLC8A2 (ENSPTRG00000011209) MEIS3 (ENSPTRG00000011208) DHX34 (ENSPTRG00000011207) C5AR2 (ENSPTRG00000041525) C5AR1 (ENSPTRG00000028958) INAFM1 (ENSPTRG00000040861) CCDC9 (ENSPTRG00000011204) BBC3 (ENSPTRG00000011203) SAE1 (ENSPTRG00000011202) ZC3H4 (ENSPTRG00000011201) TMEM160 (ENSPTRG00000011200) NPAS1 (ENSPTRG00000011199) ARHGAP35 (ENSPTRG00000011198) AP2S1 (ENSPTRG00000011197) ##22 SLC1A5 (ENSPTRG00000011194) FKRP (ENSPTRG00000050198) STRN4 (ENSPTRG00000011192) ##21 PRKD2 (ENSPTRG00000011190) ##17 DACT3 (ENSPTRG00000028961) GNG8 (ENSPTRG00000043557) PTGIR (ENSPTRG00000011186) CALM3 (ENSPTRG00000011185) PPP5D1 (ENSPTRG00000039811) ENSPTRG00000028962 PNMA8A (ENSPTRG00000011183) PNMA8C (ENSPTRG00000048654) CCDC8 (ENSPTRG00000011182) PPP5C (ENSPTRG00000011181) HIF3A (ENSPTRG00000011180) Bonobo MODERN SPECIES 10 NAPA (ENSPPAG00000033696) KPTN (ENSPPAG00000008738) SLC8A2 (ENSPPAG00000030149) ENSPPAG00000024281 ENSPPAG00000016062 DHX34 (ENSPPAG00000029582) C5AR2 (ENSPPAG00000023287) C5AR1 (ENSPPAG00000027323) CCDC9 (ENSPPAG00000036850) ENSPPAG00000039786 SAE1 (ENSPPAG00000032113) ZC3H4 (ENSPPAG00000037610) TMEM160 (ENSPPAG00000040416) NPAS1 (ENSPPAG00000040385) ARHGAP35 (ENSPPAG00000035858) ENSPPAG00000021619 ##22 SLC1A5 (ENSPPAG00000040539) FKRP (ENSPPAG00000037227) STRN4 (ENSPPAG00000035898) ##21 PRKD2 (ENSPPAG00000037267) ##17 ENSPPAG00000041113 GNG8 (ENSPPAG00000033557) PTGIR (ENSPPAG00000041949) CALM3 (ENSPPAG00000037613) ENSPPAG00000035628 PNMA8B (ENSPPAG00000042091) PNMA8A (ENSPPAG00000033527) PNMA8C (ENSPPAG00000008304) CCDC8 (ENSPPAG00000042195) PPP5C (ENSPPAG00000038591) HIF3A (ENSPPAG00000042427) Human MODERN SPECIES 10 NAPA (ENSG00000105402) KPTN (ENSG00000118162) SLC8A2 (ENSG00000118160) MEIS3 (ENSG00000105419) DHX34 (ENSG00000134815) C5AR2 (ENSG00000134830) C5AR1 (ENSG00000197405) INAFM1 (ENSG00000257704) CCDC9 (ENSG00000105321) BBC3 (ENSG00000105327) SAE1 (ENSG00000142230) ZC3H4 (ENSG00000130749) TMEM160 (ENSG00000130748) NPAS1 (ENSG00000130751) ARHGAP35 (ENSG00000160007) AP2S1 (ENSG00000042753) ##22 SLC1A5 (ENSG00000105281) FKRP (ENSG00000181027) STRN4 (ENSG00000090372) ##21 PRKD2 (ENSG00000105287) ##17 DACT3 (ENSG00000197380) GNG8 (ENSG00000167414) PTGIR (ENSG00000160013) CALM3 (ENSG00000160014) PNMA8B (ENSG00000204851) PNMA8A (ENSG00000182013) PNMA8C (ENSG00000277531) CCDC8 (ENSG00000169515) PPP5C (ENSG00000011485) HIF3A (ENSG00000124440) IGFL1 (ENSG00000188293) Gorilla MODERN SPECIES 10 KPTN (ENSGGOG00000000702) SLC8A2 (ENSGGOG00000011557) ENSGGOG00000001093 DHX34 (ENSGGOG00000010037) C5AR2 (ENSGGOG00000016452) C5AR1 (ENSGGOG00000008622) INAFM1 (ENSGGOG00000027893) CCDC9 (ENSGGOG00000015097) ENSGGOG00000040116 SAE1 (ENSGGOG00000013078) ENSGGOG00000039096 ZC3H4 (ENSGGOG00000013071) TMEM160 (ENSGGOG00000013410) NPAS1 (ENSGGOG00000013398) ARHGAP35 (ENSGGOG00000027302) ENSGGOG00000011254 ##22 SLC1A5 (ENSGGOG00000008792) FKRP (ENSGGOG00000043279) STRN4 (ENSGGOG00000010169) ##21 PRKD2 (ENSGGOG00000010508) ##17 ENSGGOG00000043507 PTGIR (ENSGGOG00000013112) CALM3 (ENSGGOG00000000212) ENSGGOG00000024504 ENSGGOG00000015668 PNMA8A (ENSGGOG00000001214) PNMA8C (ENSGGOG00000040172) CCDC8 (ENSGGOG00000016630) PPP5C (ENSGGOG00000007562) HIF3A (ENSGGOG00000007551) IGFL1 (ENSGGOG00000011461) Cercopithecidae ANCESTRAL SPECIES 12 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Rhinopithecus ANCESTRAL SPECIES 16 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.B.f ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT00390000015797.c.b.d ENSGT00940000158785 ENSGT00940000161745 Black snub-nosed monkey MODERN SPECIES 477 ARHGAP35 (ENSRBIG00000030306) AP2S1 (ENSRBIG00000041720) ##22 SLC1A5 (ENSRBIG00000032793) STRN4 (ENSRBIG00000030977) ##21 PRKD2 (ENSRBIG00000002509) ##17 ENSRBIG00000037645 GNG8 (ENSRBIG00000040120) PTGIR (ENSRBIG00000039814) ENSRBIG00000040350 PNMA8B (ENSRBIG00000043852) PNMA8A (ENSRBIG00000032652) PNMA8C (ENSRBIG00000007752) ENSRBIG00000041650 PPP5C (ENSRBIG00000043486) HIF3A (ENSRBIG00000037340) IGFL1 (ENSRBIG00000041594) IGFL2 (ENSRBIG00000013672) Golden snub-nosed monkey MODERN SPECIES 2027 ZNF541 (ENSRROG00000044146) NAPA (ENSRROG00000037389) KPTN (ENSRROG00000036495) SLC8A2 (ENSRROG00000045566) MEIS3 (ENSRROG00000029017) DHX34 (ENSRROG00000042872) C5AR1 (ENSRROG00000034629) INAFM1 (ENSRROG00000036821) CCDC9 (ENSRROG00000025974) ENSRROG00000040712 SAE1 (ENSRROG00000031746) ZC3H4 (ENSRROG00000032920) TMEM160 (ENSRROG00000043669) NPAS1 (ENSRROG00000043828) ARHGAP35 (ENSRROG00000035853) AP2S1 (ENSRROG00000045451) ##22 SLC1A5 (ENSRROG00000038480) FKRP (ENSRROG00000007497) STRN4 (ENSRROG00000042099) ##21 PRKD2 (ENSRROG00000034944) ##17 DACT3 (ENSRROG00000044269) ENSRROG00000045208 PTGIR (ENSRROG00000035701) CALM3 (ENSRROG00000033594) ENSRROG00000035990 PNMA8A (ENSRROG00000013610) PNMA8C (ENSRROG00000027253) ENSRROG00000038440 PPP5C (ENSRROG00000027318) HIF3A (ENSRROG00000032780) IGFL1 (ENSRROG00000029689) Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b.b ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Cercopithecinae_b ANCESTRAL SPECIES 23 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Olive baboon MODERN SPECIES 12 KPTN (ENSPANG00000018368) NAPA (ENSPANG00000023325) ZNF541 (ENSPANG00000009364) ENSPANG00000049850 DHX34 (ENSPANG00000011774) C5AR2 (ENSPANG00000038913) C5AR1 (ENSPANG00000035543) INAFM1 (ENSPANG00000044654) CCDC9 (ENSPANG00000014927) ENSPANG00000014625 ENSPANG00000005314 ZC3H4 (ENSPANG00000021115) TMEM160 (ENSPANG00000004010) NPAS1 (ENSPANG00000014704) ARHGAP35 (ENSPANG00000018862) AP2S1 (ENSPANG00000031161) ##22 SLC1A5 (ENSPANG00000024227) FKRP (ENSPANG00000003944) STRN4 (ENSPANG00000017664) ##21 PRKD2 (ENSPANG00000008367) ##17 DACT3 (ENSPANG00000021672) GNG8 (ENSPANG00000029260) PTGIR (ENSPANG00000019287) ENSPANG00000015474 PNMA8B (ENSPANG00000039504) PNMA8A (ENSPANG00000018286) PNMA8C (ENSPANG00000033741) CCDC8 (ENSPANG00000020252) ENSPANG00000029483 PPP5C (ENSPANG00000002966) HIF3A (ENSPANG00000014598) Cercopithecinae_d ANCESTRAL SPECIES 9 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Drill MODERN SPECIES 254 EHD2 (ENSMLEG00000044265) BICRA (ENSMLEG00000030433) ZNF541 (ENSMLEG00000029328) NAPA (ENSMLEG00000044028) KPTN (ENSMLEG00000038643) SLC8A2 (ENSMLEG00000041982) MEIS3 (ENSMLEG00000034525) DHX34 (ENSMLEG00000041860) C5AR1 (ENSMLEG00000034392) CCDC9 (ENSMLEG00000042193) ENSMLEG00000038746 ENSMLEG00000042254 ZC3H4 (ENSMLEG00000007946) ENSMLEG00000038871 ARHGAP35 (ENSMLEG00000042586) AP2S1 (ENSMLEG00000034145) ##22 SLC1A5 (ENSMLEG00000039768) STRN4 (ENSMLEG00000039813) ##21 PRKD2 (ENSMLEG00000041161) ##17 ENSMLEG00000042860 GNG8 (ENSMLEG00000041963) PTGIR (ENSMLEG00000039111) CALM3 (ENSMLEG00000040728) ENSMLEG00000038995 PNMA8A (ENSMLEG00000037418) PNMA8C (ENSMLEG00000012922) CCDC8 (ENSMLEG00000038841) ENSMLEG00000029399 PPP5C (ENSMLEG00000043928) HIF3A (ENSMLEG00000030835) IGFL1 (ENSMLEG00000042082) Sooty mangabey MODERN SPECIES 228 BICRA (ENSCATG00000043087) ZNF541 (ENSCATG00000036460) NAPA (ENSCATG00000039365) KPTN (ENSCATG00000031555) SLC8A2 (ENSCATG00000019815) MEIS3 (ENSCATG00000044534) DHX34 (ENSCATG00000032316) C5AR1 (ENSCATG00000032999) CCDC9 (ENSCATG00000023465) ENSCATG00000044506 SAE1 (ENSCATG00000041175) ZC3H4 (ENSCATG00000039046) TMEM160 (ENSCATG00000017019) NPAS1 (ENSCATG00000044490) ARHGAP35 (ENSCATG00000025751) AP2S1 (ENSCATG00000030501) ##22 SLC1A5 (ENSCATG00000041986) FKRP (ENSCATG00000015421) STRN4 (ENSCATG00000041998) ##21 PRKD2 (ENSCATG00000012657) ##17 DACT3 (ENSCATG00000028958) GNG8 (ENSCATG00000038798) PTGIR (ENSCATG00000044691) CALM3 (ENSCATG00000036622) ENSCATG00000011877 PNMA8A (ENSCATG00000037135) PNMA8C (ENSCATG00000016093) CCDC8 (ENSCATG00000030098) ENSCATG00000021418 PPP5C (ENSCATG00000031479) HIF3A (ENSCATG00000013440) Macaca ANCESTRAL SPECIES 12 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Pig-tailed macaque MODERN SPECIES 551 BICRA (ENSMNEG00000045550) ZNF541 (ENSMNEG00000031984) NAPA (ENSMNEG00000033334) KPTN (ENSMNEG00000035130) SLC8A2 (ENSMNEG00000032344) MEIS3 (ENSMNEG00000045404) DHX34 (ENSMNEG00000038649) C5AR1 (ENSMNEG00000040235) CCDC9 (ENSMNEG00000029240) ENSMNEG00000009958 ENSMNEG00000024262 ZC3H4 (ENSMNEG00000039406) TMEM160 (ENSMNEG00000026327) NPAS1 (ENSMNEG00000038438) ARHGAP35 (ENSMNEG00000029940) AP2S1 (ENSMNEG00000036216) ##22 SLC1A5 (ENSMNEG00000040803) FKRP (ENSMNEG00000013306) STRN4 (ENSMNEG00000042544) ##21 PRKD2 (ENSMNEG00000038676) ##17 DACT3 (ENSMNEG00000005969) GNG8 (ENSMNEG00000029400) PTGIR (ENSMNEG00000037044) CALM3 (ENSMNEG00000038313) ENSMNEG00000035646 PNMA8A (ENSMNEG00000028579) PNMA8C (ENSMNEG00000013860) CCDC8 (ENSMNEG00000035328) ENSMNEG00000039917 PPP5C (ENSMNEG00000029801) HIF3A (ENSMNEG00000038570) Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00390000015797.c.b ENSGT00940000158785 ENSGT00940000161745 Crab-eating macaque MODERN SPECIES 10 EHD2 (ENSMFAG00000045476) ZNF541 (ENSMFAG00000008705) NAPA (ENSMFAG00000000053) KPTN (ENSMFAG00000039746) SLC8A2 (ENSMFAG00000037527) MEIS3 (ENSMFAG00000034069) C5AR2 (ENSMFAG00000064310) C5AR1 (ENSMFAG00000064601) CCDC9 (ENSMFAG00000002381) BBC3 (ENSMFAG00000033464) SAE1 (ENSMFAG00000046126) ENSMFAG00000048737 ENSMFAG00000001653 NPAS1 (ENSMFAG00000018045) ARHGAP35 (ENSMFAG00000041192) AP2S1 (ENSMFAG00000022670) ##22 SLC1A5 (ENSMFAG00000044927) STRN4 (ENSMFAG00000035843) ##21 PRKD2 (ENSMFAG00000045883) ##17 ENSMFAG00000030779 ENSMFAG00000044510 ENSMFAG00000002915 CALM3 (ENSMFAG00000036156) ENSMFAG00000035539 PNMA8A (ENSMFAG00000006014) PNMA8C (ENSMFAG00000029984) CCDC8 (ENSMFAG00000041847) ENSMFAG00000036651 PPP5C (ENSMFAG00000034179) HIF3A (ENSMFAG00000025583) ENSMFAG00000057751 Rhesus MODERN SPECIES 10 NAPA (ENSMMUG00000014727) KPTN (ENSMMUG00000014723) SLC8A2 (ENSMMUG00000014718) MEIS3 (ENSMMUG00000013009) DHX34 (ENSMMUG00000009275) C5AR2 (ENSMMUG00000009277) C5AR1 (ENSMMUG00000009278) CCDC9 (ENSMMUG00000003075) ENSMMUG00000012466 ENSMMUG00000055893 SAE1 (ENSMMUG00000009506) ZC3H4 (ENSMMUG00000014709) TMEM160 (ENSMMUG00000057454) NPAS1 (ENSMMUG00000011330) ARHGAP35 (ENSMMUG00000011332) AP2S1 (ENSMMUG00000000833) ##22 SLC1A5 (ENSMMUG00000022163) FKRP (ENSMMUG00000028743) STRN4 (ENSMMUG00000017930) ##21 PRKD2 (ENSMMUG00000017927) ##17 ENSMMUG00000051115 DACT3 (ENSMMUG00000017924) PTGIR (ENSMMUG00000017922) CALM3 (ENSMMUG00000017921) ENSMMUG00000053552 PNMA8A (ENSMMUG00000005827) PNMA8C (ENSMMUG00000061795) CCDC8 (ENSMMUG00000003190) ENSMMUG00000000218 PPP5C (ENSMMUG00000000217) HIF3A (ENSMMUG00000000215) Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Eulipotyphla ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Hedgehog MODERN SPECIES 12309 AP2S1 (ENSEEUG00000001941) ##22 Common shrew MODERN SPECIES 2178 AP2S1 (ENSSARG00000014215) ##22 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Artiodactyla ANCESTRAL SPECIES 5 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Suina ANCESTRAL SPECIES 2 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT00940000170636 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 Chacoan peccary MODERN SPECIES 799 KPTN (ENSCWAG00000012157) SLC8A2 (ENSCWAG00000011951) ENSCWAG00000011922 MEIS3 (ENSCWAG00000011591) DHX34 (ENSCWAG00000011536) C5AR2 (ENSCWAG00000011520) C5AR1 (ENSCWAG00000011461) INAFM1 (ENSCWAG00000011443) CCDC9 (ENSCWAG00000011355) BBC3 (ENSCWAG00000011285) SAE1 (ENSCWAG00000011191) ZC3H4 (ENSCWAG00000011062) TMEM160 (ENSCWAG00000011029) NPAS1 (ENSCWAG00000010905) ARHGAP35 (ENSCWAG00000010834) AP2S1 (ENSCWAG00000010683) ##22 SLC1A5 (ENSCWAG00000010631) FKRP (ENSCWAG00000010618) STRN4 (ENSCWAG00000010545) ##21 PRKD2 (ENSCWAG00000010476) ##17 DACT3 (ENSCWAG00000010426) GNG8 (ENSCWAG00000010405) PTGIR (ENSCWAG00000010365) CALM3 (ENSCWAG00000010293) PPP5C (ENSCWAG00000010062) HIF3A (ENSCWAG00000008758) PGLYRP1 (ENSCWAG00000008579) CCDC61 (ENSCWAG00000008530) NOVA2 (ENSCWAG00000008485) NANOS2 (ENSCWAG00000008461) ENSCWAG00000008443 Pig MODERN SPECIES 14 ZNF541 (ENSSSCG00000003119) NAPA (ENSSSCG00000003120) KPTN (ENSSSCG00000003121) SLC8A2 (ENSSSCG00000029567) MEIS3 (ENSSSCG00000003115) DHX34 (ENSSSCG00000003114) C5AR2 (ENSSSCG00000003113) C5AR1 (ENSSSCG00000056729) CCDC9 (ENSSSCG00000024240) BBC3 (ENSSSCG00000003112) SAE1 (ENSSSCG00000003111) ZC3H4 (ENSSSCG00000003110) TMEM160 (ENSSSCG00000003109) NPAS1 (ENSSSCG00000003108) ARHGAP35 (ENSSSCG00000003107) AP2S1 (ENSSSCG00000003106) ##22 SLC1A5 (ENSSSCG00000003105) FKRP (ENSSSCG00000003103) STRN4 (ENSSSCG00000003104) ##21 PRKD2 (ENSSSCG00000026152) ##17 DACT3 (ENSSSCG00000022280) GNG8 (ENSSSCG00000022068) PTGIR (ENSSSCG00000026602) CALM3 (ENSSSCG00000022545) CCDC8 (ENSSSCG00000033830) ENSSSCG00000003102 PPP5C (ENSSSCG00000003098) HIF3A (ENSSSCG00000003101) ENSSSCG00000046511 PGLYRP1 (ENSSSCG00000038688) CCDC61 (ENSSSCG00000003100) Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Camelidae ANCESTRAL SPECIES 15 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Arabian camel MODERN SPECIES 35 NAPA (ENSCDRG00005001100) KPTN (ENSCDRG00005001072) SLC8A2 (ENSCDRG00005001049) MEIS3 (ENSCDRG00005001000) DHX34 (ENSCDRG00005000955) C5AR2 (ENSCDRG00005000932) C5AR1 (ENSCDRG00005000922) CCDC9 (ENSCDRG00005000886) ENSCDRG00005000861 SAE1 (ENSCDRG00005000803) ZC3H4 (ENSCDRG00005000747) TMEM160 (ENSCDRG00005000726) NPAS1 (ENSCDRG00005000700) ENSCDRG00005000682 ARHGAP35 (ENSCDRG00005000613) AP2S1 (ENSCDRG00005000547) ##22 SLC1A5 (ENSCDRG00005000433) STRN4 (ENSCDRG00005000314) ##21 PRKD2 (ENSCDRG00005000229) ##17 ENSCDRG00005000209 ENSCDRG00005012438 PTGIR (ENSCDRG00005012366) CALM3 (ENSCDRG00005012287) CCDC8 (ENSCDRG00005012268) PNMA8C (ENSCDRG00005012241) PNMA8A (ENSCDRG00005012183) PPP5C (ENSCDRG00005011852) HIF3A (ENSCDRG00005011604) IGFL1 (ENSCDRG00005011529) PGLYRP1 (ENSCDRG00005011474) CCDC61 (ENSCDRG00005011347) Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Cetacea ANCESTRAL SPECIES 6 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Blue whale MODERN SPECIES 10 BICRA (ENSBMSG00010019701) ZNF541 (ENSBMSG00010019774) NAPA (ENSBMSG00010019832) SLC8A2 (ENSBMSG00010019907) MEIS3 (ENSBMSG00010019996) DHX34 (ENSBMSG00010020024) C5AR2 (ENSBMSG00010020050) C5AR1 (ENSBMSG00010020065) CCDC9 (ENSBMSG00010020094) BBC3 (ENSBMSG00010020342) SAE1 (ENSBMSG00010020376) ZC3H4 (ENSBMSG00010020432) TMEM160 (ENSBMSG00010020478) NPAS1 (ENSBMSG00010020493) ARHGAP35 (ENSBMSG00010020533) AP2S1 (ENSBMSG00010020580) ##22 SLC1A5 (ENSBMSG00010020761) FKRP (ENSBMSG00010020816) STRN4 (ENSBMSG00010020831) ##21 PRKD2 (ENSBMSG00010020856) ##17 DACT3 (ENSBMSG00010020888) GNG8 (ENSBMSG00010020908) PTGIR (ENSBMSG00010020919) CALM3 (ENSBMSG00010020940) CCDC8 (ENSBMSG00010020979) PNMA8A (ENSBMSG00010020996) PPP5C (ENSBMSG00010021017) HIF3A (ENSBMSG00010021058) IGFL1 (ENSBMSG00010021137) PGLYRP1 (ENSBMSG00010021143) CCDC61 (ENSBMSG00010021160) Odontoceti ANCESTRAL SPECIES 6 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 Sperm whale MODERN SPECIES 985 AP2S1 (ENSPCTG00005017519) ##22 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 Dolphin MODERN SPECIES 3782 AP2S1 (ENSTTRG00000012548) ##22 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000154133.B Vaquita MODERN SPECIES 10 ZNF541 (ENSPSNG00000020105) NAPA (ENSPSNG00000020206) KPTN (ENSPSNG00000020252) SLC8A2 (ENSPSNG00000020290) MEIS3 (ENSPSNG00000020466) DHX34 (ENSPSNG00000020581) C5AR2 (ENSPSNG00000020611) C5AR1 (ENSPSNG00000020623) CCDC9 (ENSPSNG00000020676) BBC3 (ENSPSNG00000020767) SAE1 (ENSPSNG00000020821) ZC3H4 (ENSPSNG00000020937) TMEM160 (ENSPSNG00000021070) NPAS1 (ENSPSNG00000021101) ARHGAP35 (ENSPSNG00000021142) AP2S1 (ENSPSNG00000021195) ##22 SLC1A5 (ENSPSNG00000021297) FKRP (ENSPSNG00000021515) STRN4 (ENSPSNG00000021546) ##21 PRKD2 (ENSPSNG00000021606) ##17 DACT3 (ENSPSNG00000021641) GNG8 (ENSPSNG00000021667) PTGIR (ENSPSNG00000021685) CALM3 (ENSPSNG00000005927) ENSPSNG00000005987 CCDC8 (ENSPSNG00000006015) PNMA8C (ENSPSNG00000006027) PNMA8A (ENSPSNG00000006045) PPP5C (ENSPSNG00000006084) HIF3A (ENSPSNG00000006147) CCDC61 (ENSPSNG00000006217) Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000154133.B ENSGT00940000161740 Narwhal MODERN SPECIES 296 ZNF541 (ENSMMNG00015000861) NAPA (ENSMMNG00015000780) KPTN (ENSMMNG00015000731) SLC8A2 (ENSMMNG00015000698) MEIS3 (ENSMMNG00015000637) DHX34 (ENSMMNG00015000592) C5AR2 (ENSMMNG00015000578) C5AR1 (ENSMMNG00015000571) CCDC9 (ENSMMNG00015000542) BBC3 (ENSMMNG00015000522) SAE1 (ENSMMNG00015000464) ZC3H4 (ENSMMNG00015000348) TMEM160 (ENSMMNG00015000299) NPAS1 (ENSMMNG00015000269) ARHGAP35 (ENSMMNG00015000238) AP2S1 (ENSMMNG00015000164) ##22 SLC1A5 (ENSMMNG00015000079) FKRP (ENSMMNG00015000038) STRN4 (ENSMMNG00015008395) ##21 PRKD2 (ENSMMNG00015008344) ##17 DACT3 (ENSMMNG00015008322) GNG8 (ENSMMNG00015008308) PTGIR (ENSMMNG00015008294) CALM3 (ENSMMNG00015008255) CCDC8 (ENSMMNG00015008209) PNMA8C (ENSMMNG00015008203) ENSMMNG00015008192 PPP5C (ENSMMNG00015008098) HIF3A (ENSMMNG00015007921) CCDC61 (ENSMMNG00015007871) NOVA2 (ENSMMNG00015007847) Beluga whale MODERN SPECIES 14 NAPA (ENSDLEG00000003763) KPTN (ENSDLEG00000003782) SLC8A2 (ENSDLEG00000003792) MEIS3 (ENSDLEG00000003805) DHX34 (ENSDLEG00000003821) C5AR2 (ENSDLEG00000003852) C5AR1 (ENSDLEG00000003857) CCDC9 (ENSDLEG00000003861) BBC3 (ENSDLEG00000003877) SAE1 (ENSDLEG00000003883) ZC3H4 (ENSDLEG00000003907) TMEM160 (ENSDLEG00000003972) ENSDLEG00000003975 ENSDLEG00000003982 ARHGAP35 (ENSDLEG00000003986) AP2S1 (ENSDLEG00000003991) ##22 SLC1A5 (ENSDLEG00000003998) FKRP (ENSDLEG00000004003) STRN4 (ENSDLEG00000004005) ##21 PRKD2 (ENSDLEG00000004024) ##17 DACT3 (ENSDLEG00000004034) GNG8 (ENSDLEG00000004040) PTGIR (ENSDLEG00000004041) CALM1 (ENSDLEG00000004044) CCDC8 (ENSDLEG00000004049) PNMA8C (ENSDLEG00000004056) PNMA8A (ENSDLEG00000004062) PPP5C (ENSDLEG00000004066) HIF3A (ENSDLEG00000004077) CCDC61 (ENSDLEG00000004090) NOVA2 (ENSDLEG00000004096) Pecora ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Yarkand deer MODERN SPECIES 27 SLC8A2 (ENSCHYG00000018134) MEIS3 (ENSCHYG00000017783) DHX34 (ENSCHYG00000017576) C5AR2 (ENSCHYG00000017549) ENSCHYG00000017494 C5AR1 (ENSCHYG00000017464) INAFM1 (ENSCHYG00000017434) ENSCHYG00000017388 CCDC9 (ENSCHYG00000017076) ENSCHYG00000017008 SAE1 (ENSCHYG00000016642) ZC3H4 (ENSCHYG00000016192) TMEM160 (ENSCHYG00000016093) NPAS1 (ENSCHYG00000015977) ARHGAP35 (ENSCHYG00000015852) AP2S1 (ENSCHYG00000015644) ##22 SLC1A5 (ENSCHYG00000015481) FKRP (ENSCHYG00000015463) STRN4 (ENSCHYG00000015201) ##21 PRKD2 (ENSCHYG00000015014) ##17 ENSCHYG00000014954 ENSCHYG00000014899 GNG8 (ENSCHYG00000014847) PTGIR (ENSCHYG00000014757) CALM3 (ENSCHYG00000014426) CCDC8 (ENSCHYG00000014352) ENSCHYG00000014216 PNMA8A (ENSCHYG00000014197) PPP5C (ENSCHYG00000013920) HIF3A (ENSCHYG00000013457) ENSCHYG00000013392 Percora_a ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Siberian musk deer MODERN SPECIES 124 ZNF541 (ENSMMSG00000001131) NAPA (ENSMMSG00000001259) KPTN (ENSMMSG00000001314) SLC8A2 (ENSMMSG00000001344) MEIS3 (ENSMMSG00000001373) DHX34 (ENSMMSG00000001413) C5AR2 (ENSMMSG00000001489) C5AR1 (ENSMMSG00000001497) CCDC9 (ENSMMSG00000001515) BBC3 (ENSMMSG00000001565) ENSMMSG00000001602 ZC3H4 (ENSMMSG00000001677) TMEM160 (ENSMMSG00000001690) NPAS1 (ENSMMSG00000001706) ARHGAP35 (ENSMMSG00000001730) AP2S1 (ENSMMSG00000001766) ##22 SLC1A5 (ENSMMSG00000001866) FKRP (ENSMMSG00000001899) STRN4 (ENSMMSG00000001918) ##21 PRKD2 (ENSMMSG00000002012) ##17 DACT3 (ENSMMSG00000002045) GNG8 (ENSMMSG00000002075) PTGIR (ENSMMSG00000002087) CALM3 (ENSMMSG00000002115) ENSMMSG00000002162 ENSMMSG00000002170 PPP5C (ENSMMSG00000002194) HIF3A (ENSMMSG00000002239) ENSMMSG00000002309 IGFL1 (ENSMMSG00000002324) PGLYRP1 (ENSMMSG00000002338) Bovidae ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Caprinae ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 Goat MODERN SPECIES 9 KPTN (ENSCHIG00000019625) SLC8A2 (ENSCHIG00000005606) MEIS3 (ENSCHIG00000013472) DHX34 (ENSCHIG00000024526) C5AR2 (ENSCHIG00000003475) C5AR1 (ENSCHIG00000016291) INAFM1 (ENSCHIG00000003153) CCDC9 (ENSCHIG00000008730) ENSCHIG00000023357 BBC3 (ENSCHIG00000010347) SAE1 (ENSCHIG00000026570) ZC3H4 (ENSCHIG00000013956) TMEM160 (ENSCHIG00000020208) NPAS1 (ENSCHIG00000006784) ARHGAP35 (ENSCHIG00000024478) AP2S1 (ENSCHIG00000022984) ##22 SLC1A5 (ENSCHIG00000020955) FKRP (ENSCHIG00000005654) STRN4 (ENSCHIG00000019269) ##21 PRKD2 (ENSCHIG00000021220) ##17 DACT3 (ENSCHIG00000021818) GNG8 (ENSCHIG00000018099) PTGIR (ENSCHIG00000016612) CALM3 (ENSCHIG00000011296) CCDC8 (ENSCHIG00000010061) ENSCHIG00000026916 PPP5C (ENSCHIG00000024557) HIF3A (ENSCHIG00000018939) IGFL1 (ENSCHIG00000023173) PGLYRP1 (ENSCHIG00000013020) CCDC61 (ENSCHIG00000024140) Rambouillet Sheep MODERN SPECIES 5 NAPA (ENSOARG00020012824) KPTN (ENSOARG00020012769) SLC8A2 (ENSOARG00020012581) MEIS3 (ENSOARG00020012359) DHX34 (ENSOARG00020012207) C5AR2 (ENSOARG00020012174) C5AR1 (ENSOARG00020012129) INAFM1 (ENSOARG00020012115) CCDC9 (ENSOARG00020012051) BBC3 (ENSOARG00020011954) SAE1 (ENSOARG00020011750) ZC3H4 (ENSOARG00020011583) TMEM160 (ENSOARG00020011550) NPAS1 (ENSOARG00020011377) ARHGAP35 (ENSOARG00020011291) AP2S1 (ENSOARG00020010737) ##22 SLC1A5 (ENSOARG00020010548) FKRP (ENSOARG00020010516) STRN4 (ENSOARG00020009995) ##21 PRKD2 (ENSOARG00020015155) ##17 DACT3 (ENSOARG00020015009) GNG8 (ENSOARG00020014962) PTGIR (ENSOARG00020014841) CALM2 (ENSOARG00020014681) CCDC8 (ENSOARG00020014656) PPP5C (ENSOARG00020014431) HIF3A (ENSOARG00020013117) IGFL1 (ENSOARG00020012997) PGLYRP1 (ENSOARG00020012949) CCDC61 (ENSOARG00020012803) NOVA2 (ENSOARG00020012718) Bovinae ANCESTRAL SPECIES 3 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 American bison MODERN SPECIES 3227 EHD2 (ENSBBBG00000006945) BICRA (ENSBBBG00000003213) ZNF541 (ENSBBBG00000014201) NAPA (ENSBBBG00000014223) KPTN (ENSBBBG00000014243) SLC8A2 (ENSBBBG00000014252) MEIS3 (ENSBBBG00000009054) DHX34 (ENSBBBG00000014324) C5AR1 (ENSBBBG00000003265) CCDC9 (ENSBBBG00000014362) BBC3 (ENSBBBG00000014369) SAE1 (ENSBBBG00000014398) ENSBBBG00000003321 ENSBBBG00000014422 ARHGAP35 (ENSBBBG00000014432) AP2S1 (ENSBBBG00000002880) ##22 SLC1A5 (ENSBBBG00000003362) STRN4 (ENSBBBG00000007553) ##21 PRKD2 (ENSBBBG00000007407) ##17 ENSBBBG00000014572 GNG8 (ENSBBBG00000007169) PTGIR (ENSBBBG00000014585) CALM3 (ENSBBBG00000014637) CCDC8 (ENSBBBG00000007256) PNMA8A (ENSBBBG00000014698) PPP5C (ENSBBBG00000014726) HIF3A (ENSBBBG00000014756) IGFL1 (ENSBBBG00000014765) ENSBBBG00000009057 PGLYRP1 (ENSBBBG00000006949) CCDC61 (ENSBBBG00000002834) Bos ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 Bos_b ANCESTRAL SPECIES ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 Cow MODERN SPECIES 9 NAPA (ENSBTAG00000013084) KPTN (ENSBTAG00000030769) SLC8A2 (ENSBTAG00000010856) MEIS3 (ENSBTAG00000006862) DHX34 (ENSBTAG00000006848) C5AR2 (ENSBTAG00000037735) C5AR1 (ENSBTAG00000020872) INAFM1 (ENSBTAG00000053132) CCDC9 (ENSBTAG00000014117) BBC3 (ENSBTAG00000050313) SAE1 (ENSBTAG00000002676) ZC3H4 (ENSBTAG00000009286) TMEM160 (ENSBTAG00000015579) NPAS1 (ENSBTAG00000015576) ARHGAP35 (ENSBTAG00000015543) AP2S1 (ENSBTAG00000010584) ##22 SLC1A5 (ENSBTAG00000013577) FKRP (ENSBTAG00000050243) STRN4 (ENSBTAG00000005830) ##21 PRKD2 (ENSBTAG00000015599) ##17 ENSBTAG00000052862 DACT3 (ENSBTAG00000030705) GNG8 (ENSBTAG00000017762) PTGIR (ENSBTAG00000014585) CALM3 (ENSBTAG00000014583) CCDC8 (ENSBTAG00000018181) PNMA8A (ENSBTAG00000009337) PPP5C (ENSBTAG00000008014) HIF3A (ENSBTAG00000018948) IGFL1 (ENSBTAG00000000027) ENSBTAG00000023367 Hybrid Bos Indicus MODERN SPECIES 9 ZNF541 (ENSBIXG00005025312) NAPA (ENSBIXG00005025291) KPTN (ENSBIXG00005006855) SLC8A2 (ENSBIXG00005025226) MEIS3 (ENSBIXG00005025204) DHX34 (ENSBIXG00005004281) C5AR2 (ENSBIXG00005025135) C5AR1 (ENSBIXG00005025115) CCDC9 (ENSBIXG00005025090) BBC3 (ENSBIXG00005024989) SAE1 (ENSBIXG00005024933) ZC3H4 (ENSBIXG00005024863) ENSBIXG00005024833 NPAS1 (ENSBIXG00005024813) ARHGAP35 (ENSBIXG00005004231) AP2S1 (ENSBIXG00005024725) ##22 SLC1A5 (ENSBIXG00005024582) FKRP (ENSBIXG00005024505) STRN4 (ENSBIXG00005024484) ##21 PRKD2 (ENSBIXG00005024335) ##17 DACT3 (ENSBIXG00005024273) GNG8 (ENSBIXG00005004139) PTGIR (ENSBIXG00005024224) CALM3 (ENSBIXG00005024193) CCDC8 (ENSBIXG00005024071) PNMA8A (ENSBIXG00005023944) PPP5C (ENSBIXG00005023931) HIF3A (ENSBIXG00005023842) IGFL1 (ENSBIXG00005023661) ENSBIXG00005023638 PGLYRP1 (ENSBIXG00005023625) Bos_a ANCESTRAL SPECIES 16 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B Wild yak MODERN SPECIES 1227 NAPA (ENSBMUG00000004066) KPTN (ENSBMUG00000004112) SLC8A2 (ENSBMUG00000004136) MEIS3 (ENSBMUG00000004394) DHX34 (ENSBMUG00000004684) C5AR2 (ENSBMUG00000004695) C5AR1 (ENSBMUG00000004853) INAFM1 (ENSBMUG00000004859) CCDC9 (ENSBMUG00000004872) BBC3 (ENSBMUG00000004887) SAE1 (ENSBMUG00000004945) ZC3H4 (ENSBMUG00000005069) TMEM160 (ENSBMUG00000005100) ENSBMUG00000005105 ARHGAP35 (ENSBMUG00000005114) AP2S1 (ENSBMUG00000005174) ##22 SLC1A5 (ENSBMUG00000005207) STRN4 (ENSBMUG00000005225) ##21 PRKD2 (ENSBMUG00000005252) ##17 ENSBMUG00000005284 GNG8 (ENSBMUG00000005292) PTGIR (ENSBMUG00000005300) CALM3 (ENSBMUG00000005340) ENSBMUG00000005372 CCDC8 (ENSBMUG00000005377) Domestic yak MODERN SPECIES 12 NAPA (ENSBGRG00000025359) KPTN (ENSBGRG00000025467) SLC8A2 (ENSBGRG00000025527) MEIS3 (ENSBGRG00000025550) ENSBGRG00000014586 C5AR2 (ENSBGRG00000014720) C5AR1 (ENSBGRG00000014737) INAFM1 (ENSBGRG00000014787) CCDC9 (ENSBGRG00000014812) BBC3 (ENSBGRG00000015056) SAE1 (ENSBGRG00000015234) ZC3H4 (ENSBGRG00000015678) TMEM160 (ENSBGRG00000015984) NPAS1 (ENSBGRG00000016050) ARHGAP35 (ENSBGRG00000016330) ENSBGRG00000016517 ##22 SLC1A5 (ENSBGRG00000016867) FKRP (ENSBGRG00000017133) STRN4 (ENSBGRG00000017163) ##21 PRKD2 (ENSBGRG00000017664) ##17 DACT3 (ENSBGRG00000017786) GNG8 (ENSBGRG00000017906) PTGIR (ENSBGRG00000017949) CALM3 (ENSBGRG00000018002) CCDC8 (ENSBGRG00000018249) PNMA8A (ENSBGRG00000018367) PPP5C (ENSBGRG00000018431) HIF3A (ENSBGRG00000018647) IGFL1 (ENSBGRG00000019136) PGLYRP1 (ENSBGRG00000019198) CCDC61 (ENSBGRG00000019266) Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B Carnivora ANCESTRAL SPECIES 2 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Felidae ANCESTRAL SPECIES 7 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Cat MODERN SPECIES 246 ZNF541 (ENSFCAG00000028959) NAPA (ENSFCAG00000006151) KPTN (ENSFCAG00000006149) SLC8A2 (ENSFCAG00000029230) MEIS3 (ENSFCAG00000006146) DHX34 (ENSFCAG00000006144) C5AR2 (ENSFCAG00000043336) C5AR1 (ENSFCAG00000046725) CCDC9 (ENSFCAG00000004837) BBC3 (ENSFCAG00000040792) SAE1 (ENSFCAG00000027112) ZC3H4 (ENSFCAG00000004835) ENSFCAG00000032417 NPAS1 (ENSFCAG00000004833) ARHGAP35 (ENSFCAG00000004831) AP2S1 (ENSFCAG00000031554) ##22 SLC1A5 (ENSFCAG00000005736) FKRP (ENSFCAG00000024153) STRN4 (ENSFCAG00000000782) ##21 PRKD2 (ENSFCAG00000010311) ##17 DACT3 (ENSFCAG00000045800) GNG8 (ENSFCAG00000042245) PTGIR (ENSFCAG00000027533) CALM3 (ENSFCAG00000004995) ENSFCAG00000048982 CCDC8 (ENSFCAG00000042508) ENSFCAG00000032430 PNMA8A (ENSFCAG00000042861) PPP5C (ENSFCAG00000014185) HIF3A (ENSFCAG00000014181) ENSFCAG00000025239 Panthera ANCESTRAL SPECIES 20 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a Tiger MODERN SPECIES 36 ENSPTIG00000021571 ENSPTIG00000018779 EHD2 (ENSPTIG00000018608) ZNF541 (ENSPTIG00000014919) NAPA (ENSPTIG00000012945) ENSPTIG00000012410 ENSPTIG00000011113 MEIS3 (ENSPTIG00000019415) DHX34 (ENSPTIG00000018435) C5AR1 (ENSPTIG00000000446) ENSPTIG00000016579 SAE1 (ENSPTIG00000016036) ZC3H4 (ENSPTIG00000014229) ENSPTIG00000013620 ARHGAP35 (ENSPTIG00000013260) ENSPTIG00000012880 ##22 SLC1A5 (ENSPTIG00000011531) STRN4 (ENSPTIG00000005381) ##21 PRKD2 (ENSPTIG00000018488) ##17 ENSPTIG00000017935 GNG8 (ENSPTIG00000017646) ENSPTIG00000017515 ENSPTIG00000015079 PNMA8C (ENSPTIG00000007343) ENSPTIG00000014036 Panthera_a ANCESTRAL SPECIES 22 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a lion MODERN SPECIES 15 NAPA (ENSPLOG00000006967) KPTN (ENSPLOG00000006920) SLC8A2 (ENSPLOG00000006887) MEIS3 (ENSPLOG00000006810) DHX34 (ENSPLOG00000006682) C5AR2 (ENSPLOG00000006656) C5AR1 (ENSPLOG00000006646) INAFM1 (ENSPLOG00000006630) CCDC9 (ENSPLOG00000006569) BBC3 (ENSPLOG00000006527) SAE1 (ENSPLOG00000006483) ZC3H4 (ENSPLOG00000006441) ENSPLOG00000006416 NPAS1 (ENSPLOG00000006360) ARHGAP35 (ENSPLOG00000006320) AP2S1 (ENSPLOG00000006172) ##22 ENSPLOG00000006107 FKRP (ENSPLOG00000006088) STRN4 (ENSPLOG00000006025) ##21 PRKD2 (ENSPLOG00000005850) ##17 DACT3 (ENSPLOG00000005799) GNG8 (ENSPLOG00000005773) PTGIR (ENSPLOG00000005755) CALM3 (ENSPLOG00000005689) PNMA8C (ENSPLOG00000005649) PNMA8A (ENSPLOG00000005626) PPP5C (ENSPLOG00000005583) HIF3A (ENSPLOG00000005534) ENSPLOG00000005466 ENSPLOG00000021927 PGLYRP1 (ENSPLOG00000021909) leopard DUPLICATION leopard MODERN SPECIES 103 NAPA (ENSPPRG00000005495) KPTN (ENSPPRG00000004578) SLC8A2 (ENSPPRG00000003527) MEIS3 (ENSPPRG00000003182) DHX34 (ENSPPRG00000002535) C5AR2 (ENSPPRG00000015739) C5AR1 (ENSPPRG00000015726) INAFM1 (ENSPPRG00000015681) CCDC9 (ENSPPRG00000001198) BBC3 (ENSPPRG00000000897) SAE1 (ENSPPRG00000000641) ZC3H4 (ENSPPRG00000023272) TMEM160 (ENSPPRG00000023643) NPAS1 (ENSPPRG00000023743) ARHGAP35 (ENSPPRG00000024753) AP2S1 (ENSPPRG00000022307) ##22 ENSPPRG00000019101 ##22 SLC1A5 (ENSPPRG00000017631) FKRP (ENSPPRG00000015401) STRN4 (ENSPPRG00000015890) ##21 PRKD2 (ENSPPRG00000014664) ##17 DACT3 (ENSPPRG00000015373) GNG8 (ENSPPRG00000013229) PTGIR (ENSPPRG00000013057) CALM3 (ENSPPRG00000012684) CCDC8 (ENSPPRG00000015314) PNMA8C (ENSPPRG00000015301) ENSPPRG00000010075 PPP5C (ENSPPRG00000009086) HIF3A (ENSPPRG00000008307) ENSPPRG00000006901 leopard MODERN SPECIES 103 KPTN (ENSPPRG00000004578) SLC8A2 (ENSPPRG00000003527) MEIS3 (ENSPPRG00000003182) DHX34 (ENSPPRG00000002535) C5AR2 (ENSPPRG00000015739) C5AR1 (ENSPPRG00000015726) INAFM1 (ENSPPRG00000015681) CCDC9 (ENSPPRG00000001198) BBC3 (ENSPPRG00000000897) SAE1 (ENSPPRG00000000641) ZC3H4 (ENSPPRG00000023272) TMEM160 (ENSPPRG00000023643) NPAS1 (ENSPPRG00000023743) ARHGAP35 (ENSPPRG00000024753) AP2S1 (ENSPPRG00000022307) ##22 ENSPPRG00000019101 ##22 SLC1A5 (ENSPPRG00000017631) FKRP (ENSPPRG00000015401) STRN4 (ENSPPRG00000015890) ##21 PRKD2 (ENSPPRG00000014664) ##17 DACT3 (ENSPPRG00000015373) GNG8 (ENSPPRG00000013229) PTGIR (ENSPPRG00000013057) CALM3 (ENSPPRG00000012684) CCDC8 (ENSPPRG00000015314) PNMA8C (ENSPPRG00000015301) ENSPPRG00000010075 PPP5C (ENSPPRG00000009086) HIF3A (ENSPPRG00000008307) ENSPPRG00000006901 ENSPPRG00000006656 Caniformia ANCESTRAL SPECIES 1 ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Caniformia_b ANCESTRAL SPECIES 2 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Mustelinae ANCESTRAL SPECIES 7 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Ferret MODERN SPECIES 291 ZNF541 (ENSMPUG00000004486) NAPA (ENSMPUG00000004511) KPTN (ENSMPUG00000004660) SLC8A2 (ENSMPUG00000004745) ENSMPUG00000004760 DHX34 (ENSMPUG00000004925) C5AR2 (ENSMPUG00000019367) C5AR1 (ENSMPUG00000019368) CCDC9 (ENSMPUG00000004941) BBC3 (ENSMPUG00000004953) SAE1 (ENSMPUG00000004965) ZC3H4 (ENSMPUG00000005065) TMEM160 (ENSMPUG00000005131) NPAS1 (ENSMPUG00000005118) ARHGAP35 (ENSMPUG00000005138) AP2S1 (ENSMPUG00000005143) ##22 SLC1A5 (ENSMPUG00000005149) FKRP (ENSMPUG00000019369) STRN4 (ENSMPUG00000005157) ##21 PRKD2 (ENSMPUG00000005234) ##17 ENSMPUG00000005246 GNG8 (ENSMPUG00000005250) PTGIR (ENSMPUG00000005257) CALM3 (ENSMPUG00000005261) CCDC8 (ENSMPUG00000019370) PNMA8A (ENSMPUG00000005271) PPP5C (ENSMPUG00000005275) HIF3A (ENSMPUG00000005285) ENSMPUG00000005385 PGLYRP1 (ENSMPUG00000005395) CCDC61 (ENSMPUG00000005428) American mink MODERN SPECIES 135 ZNF541 (ENSNVIG00000011069) NAPA (ENSNVIG00000011031) KPTN (ENSNVIG00000011012) SLC8A2 (ENSNVIG00000011004) MEIS3 (ENSNVIG00000010981) DHX34 (ENSNVIG00000010958) C5AR2 (ENSNVIG00000010949) C5AR1 (ENSNVIG00000010940) CCDC9 (ENSNVIG00000010901) ENSNVIG00000010884 SAE1 (ENSNVIG00000010826) ZC3H4 (ENSNVIG00000010804) TMEM160 (ENSNVIG00000010793) NPAS1 (ENSNVIG00000010755) ARHGAP35 (ENSNVIG00000010727) AP2S1 (ENSNVIG00000010605) ##22 SLC1A5 (ENSNVIG00000010588) FKRP (ENSNVIG00000010581) STRN4 (ENSNVIG00000010539) ##21 PRKD2 (ENSNVIG00000009771) ##17 ENSNVIG00000009748 ENSNVIG00000009739 PTGIR (ENSNVIG00000009732) CALM3 (ENSNVIG00000009664) ENSNVIG00000009652 CCDC8 (ENSNVIG00000009649) C9JTH8 (ENSNVIG00000009647) PNMA8A (ENSNVIG00000009641) PPP5C (ENSNVIG00000009605) HIF3A (ENSNVIG00000009557) ENSNVIG00000009514 Ursidae ANCESTRAL SPECIES 30 ENSGT00390000005826.a.a.x ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.d ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000164310.e ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b Ursus ANCESTRAL SPECIES 13 ENSGT00940000159112.b ENSGT00390000005826.a.a.x ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00550000075007.d ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00950000183095.a.b.a.b.a.h.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000164310.e ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a American black bear MODERN SPECIES 4385 AP2S1 (ENSUAMG00000016792) ##22 SLC1A5 (ENSUAMG00000016798) Polar bear MODERN SPECIES 115 CRX (ENSUMAG00000023837) SELENOW (ENSUMAG00000023836) ENSUMAG00000023832 ENSUMAG00000023830 ENSUMAG00000023829 NAPA (ENSUMAG00000023811) KPTN (ENSUMAG00000023806) ENSUMAG00000023803 MEIS3 (ENSUMAG00000023795) C5AR1 (ENSUMAG00000023780) CCDC9 (ENSUMAG00000023773) SAE1 (ENSUMAG00000023769) ENSUMAG00000023768 ENSUMAG00000023763 ARHGAP35 (ENSUMAG00000023756) ENSUMAG00000023753 ##22 ENSUMAG00000023748 STRN4 (ENSUMAG00000023724) ##21 PRKD2 (ENSUMAG00000023719) ##17 GNG8 (ENSUMAG00000023717) ENSUMAG00000023716 ENSUMAG00000023715 CCDC8 (ENSUMAG00000023713) PNMA8C (ENSUMAG00000023712) PNMA8A (ENSUMAG00000023711) PPP5C (ENSUMAG00000023710) HIF3A (ENSUMAG00000023708) ENSUMAG00000023707 ENSUMAG00000023706 ENSUMAG00000023704 PGLYRP1 (ENSUMAG00000023702) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1653 ENSAMEG00000024976 ##22 Giant Panda MODERN SPECIES 3 EHD2 (ENSAMEG00000015263) BICRA (ENSAMEG00000008090) ZNF541 (ENSAMEG00000029569) NAPA (ENSAMEG00000008104) KPTN (ENSAMEG00000008142) SLC8A2 (ENSAMEG00000008172) MEIS3 (ENSAMEG00000008199) DHX34 (ENSAMEG00000008270) C5AR2 (ENSAMEG00000019477) CCDC9 (ENSAMEG00000008286) BBC3 (ENSAMEG00000008310) SAE1 (ENSAMEG00000008313) ZC3H4 (ENSAMEG00000008349) TMEM160 (ENSAMEG00000028478) ARHGAP35 (ENSAMEG00000008374) ENSAMEG00000008394 ##22 SLC1A5 (ENSAMEG00000008407) STRN4 (ENSAMEG00000008435) ##21 PRKD2 (ENSAMEG00000008498) ##17 ENSAMEG00000026303 GNG8 (ENSAMEG00000008557) ENSAMEG00000008560 ENSAMEG00000029734 ENSAMEG00000024569 ENSAMEG00000024067 ENSAMEG00000029960 ENSAMEG00000008577 HIF3A (ENSAMEG00000008615) ENSAMEG00000008655 PGLYRP1 (ENSAMEG00000000626) CCDC61 (ENSAMEG00000000629) Canidae ANCESTRAL SPECIES 5 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.a ENSGT00940000161006 Canis_lupus ANCESTRAL SPECIES ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.b ENSGT00390000009557.B.a.a Dog MODERN SPECIES NAPA (ENSCAFG00845002467) KPTN (ENSCAFG00845002500) SLC8A2 (ENSCAFG00845002555) MEIS3 (ENSCAFG00845002685) DHX34 (ENSCAFG00845002720) C5AR2 (ENSCAFG00845002732) C5AR1 (ENSCAFG00845002761) INAFM1 (ENSCAFG00845002784) CCDC9 (ENSCAFG00845002800) BBC3 (ENSCAFG00845002815) SAE1 (ENSCAFG00845002951) ZC3H4 (ENSCAFG00845002992) TMEM160 (ENSCAFG00845003007) ARHGAP35 (ENSCAFG00845003034) ARHGAP35 (ENSCAFG00845003086) AP2S1 (ENSCAFG00845003157) ##22 SLC1A5 (ENSCAFG00845003284) FKRP (ENSCAFG00845003332) STRN4 (ENSCAFG00845003353) ##21 PRKD2 (ENSCAFG00845003382) ##17 ENSCAFG00845003424 DACT3 (ENSCAFG00845003449) GNG8 (ENSCAFG00845003458) ENSCAFG00845004281 ENSCAFG00845004289 ENSCAFG00845004294 ENSCAFG00845004299 ENSCAFG00845004375 HIF3A (ENSCAFG00845004467) ENSCAFG00845004529 ENSCAFG00845004536 Dingo MODERN SPECIES 125 NAPA (ENSCAFG00020000831) KPTN (ENSCAFG00020000973) SLC8A2 (ENSCAFG00020001118) MEIS3 (ENSCAFG00020001147) DHX34 (ENSCAFG00020001163) C5AR2 (ENSCAFG00020001172) C5AR1 (ENSCAFG00020001178) INAFM1 (ENSCAFG00020001184) CCDC9 (ENSCAFG00020001196) ENSCAFG00020001204 SAE1 (ENSCAFG00020001254) ZC3H4 (ENSCAFG00020001450) ENSCAFG00020001527 ENSCAFG00020001534 ARHGAP35 (ENSCAFG00020001540) ENSCAFG00020001550 ##22 SLC1A5 (ENSCAFG00020001559) FKRP (ENSCAFG00020001564) STRN4 (ENSCAFG00020001572) ##21 PRKD2 (ENSCAFG00020001585) ##17 DACT3 (ENSCAFG00020001607) GNG8 (ENSCAFG00020001623) PTGIR (ENSCAFG00020001637) ENSCAFG00020001643 CCDC8 (ENSCAFG00020001658) PNMA8C (ENSCAFG00020001664) PNMA8A (ENSCAFG00020001670) PPP5C (ENSCAFG00020001676) HIF3A (ENSCAFG00020001684) ENSCAFG00020001697 ENSCAFG00020001734 Red fox MODERN SPECIES 101 NAPA (ENSVVUG00000023413) KPTN (ENSVVUG00000023485) SLC8A2 (ENSVVUG00000023490) MEIS3 (ENSVVUG00000023497) DHX34 (ENSVVUG00000023515) C5AR2 (ENSVVUG00000023517) C5AR1 (ENSVVUG00000023518) CCDC9 (ENSVVUG00000023520) ENSVVUG00000023521 ENSVVUG00000000139 SAE1 (ENSVVUG00000000163) ZC3H4 (ENSVVUG00000000208) TMEM160 (ENSVVUG00000000280) NPAS1 (ENSVVUG00000000317) ARHGAP35 (ENSVVUG00000000350) AP2S1 (ENSVVUG00000000416) ##22 FKRP (ENSVVUG00000000452) SLC1A5 (ENSVVUG00000000475) STRN4 (ENSVVUG00000000583) ##21 PRKD2 (ENSVVUG00000002735) ##17 ENSVVUG00000002753 GNG8 (ENSVVUG00000002757) PTGIR (ENSVVUG00000002758) CALM1 (ENSVVUG00000002762) CCDC8 (ENSVVUG00000002765) PNMA8C (ENSVVUG00000002766) PNMA8A (ENSVVUG00000002767) PPP5C (ENSVVUG00000002773) HIF3A (ENSVVUG00000002779) ENSVVUG00000002866 PGLYRP1 (ENSVVUG00000002874) Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C Equus ANCESTRAL SPECIES 1 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006.h Horse DUPLICATION Horse MODERN SPECIES 1 BICRA (ENSECAG00000030809) ZNF541 (ENSECAG00000019417) NAPA (ENSECAG00000006959) KPTN (ENSECAG00000018392) SLC8A2 (ENSECAG00000008392) MEIS3 (ENSECAG00000016791) DHX34 (ENSECAG00000011354) C5AR2 (ENSECAG00000006218) C5AR1 (ENSECAG00000006153) CCDC9 (ENSECAG00000008559) ENSECAG00000031168 SAE1 (ENSECAG00000002087) ZC3H4 (ENSECAG00000024342) NPAS1 (ENSECAG00000022513) ARHGAP35 (ENSECAG00000017712) AP2S1 (ENSECAG00000016403) ##22 SLC1A5 (ENSECAG00000011637) FKRP (ENSECAG00000010652) STRN4 (ENSECAG00000002830) ##21 PRKD2 (ENSECAG00000024775) ##17 DACT3 (ENSECAG00000026972) PTGIR (ENSECAG00000023626) CALM3 (ENSECAG00000022442) ENSECAG00000060028 PNMA8A (ENSECAG00000006115) PNMA8C (ENSECAG00000034552) CCDC8 (ENSECAG00000056835) PPP5C (ENSECAG00000056298) HIF3A (ENSECAG00000020693) ENSECAG00000012503 ENSECAG00000016992 Horse MODERN SPECIES 25 HNRNPA2B1 (ENSECAG00000000782) SNX10 (ENSECAG00000013745) SKAP2 (ENSECAG00000020343) HOXA1 (ENSECAG00000021767) HOXA2 (ENSECAG00000000451) HOXA3 (ENSECAG00000022055) HOXA5 (ENSECAG00000000461) HOXA6 (ENSECAG00000000575) HOXA7 (ENSECAG00000054772) HOXA9 (ENSECAG00000054482) HOXA10 (ENSECAG00000012577) HOXA11 (ENSECAG00000058817) HOXA13 (ENSECAG00000038185) EVX1 (ENSECAG00000014337) HIBADH (ENSECAG00000016863) ENSECAG00000054721 ##22 TAX1BP1 (ENSECAG00000001911) JAZF1 (ENSECAG00000016817) ENSECAG00000055789 CREB5 (ENSECAG00000020180) TRIL (ENSECAG00000020808) CPVL (ENSECAG00000024795) CHN2 (ENSECAG00000012830) WIPF3 (ENSECAG00000022875) SCRN1 (ENSECAG00000023241) FKBP14 (ENSECAG00000024710) PLEKHA8 (ENSECAG00000007737) ENSECAG00000038623 ZNRF2 (ENSECAG00000013800) NOD1 (ENSECAG00000013825) GGCT (ENSECAG00000017845) Donkey DUPLICATION Donkey MODERN SPECIES 18 ENSEASG00005028907 MEIS3 (ENSEASG00005004166) DHX34 (ENSEASG00005004155) C5AR2 (ENSEASG00005025956) C5AR1 (ENSEASG00005026249) INAFM1 (ENSEASG00005030427) CCDC9 (ENSEASG00005004139) ENSEASG00005035087 SAE1 (ENSEASG00005004124) ZC3H4 (ENSEASG00005004107) TMEM160 (ENSEASG00005023909) ENSEASG00005038114 ENSEASG00005004094 ENSEASG00005032745 ARHGAP35 (ENSEASG00005004087) ENSEASG00005032304 ##22 SLC1A5 (ENSEASG00005004062) FKRP (ENSEASG00005024317) STRN4 (ENSEASG00005004043) ##21 PRKD2 (ENSEASG00005004020) ##17 DACT3 (ENSEASG00005033792) ENSEASG00005004015 ENSEASG00005004013 CALM3 (ENSEASG00005004012) ENSEASG00005036842 ENSEASG00005024649 CCDC8 (ENSEASG00005031475) PNMA8C (ENSEASG00005004006) PPP5C (ENSEASG00005003995) HIF3A (ENSEASG00005003993) ENSEASG00005029977 Donkey MODERN SPECIES HNRNPA2B1 (ENSEASG00005022108) CBX3 (ENSEASG00005022119) SNX10 (ENSEASG00005022123) SKAP2 (ENSEASG00005022133) HOXA1 (ENSEASG00005030120) HOXA2 (ENSEASG00005033684) HOXA3 (ENSEASG00005035791) HOXA5 (ENSEASG00005034554) ENSEASG00005028567 ENSEASG00005022172 HOXA10 (ENSEASG00005022176) HOXA11 (ENSEASG00005022180) HOXA13 (ENSEASG00005022194) EVX1 (ENSEASG00005000033) HIBADH (ENSEASG00005000063) ENSEASG00005000084 ##22 ENSEASG00005000155 JAZF1 (ENSEASG00005024824) CREB5 (ENSEASG00005000178) TRIL (ENSEASG00005026075) CPVL (ENSEASG00005000218) CHN2 (ENSEASG00005000230) PRR15 (ENSEASG00005027816) SCRN1 (ENSEASG00005000315) FKBP14 (ENSEASG00005000321) PLEKHA8 (ENSEASG00005000323) MTURN (ENSEASG00005024315) ZNRF2 (ENSEASG00005000332) NOD1 (ENSEASG00005000357) GGCT (ENSEASG00005026839) GARS1 (ENSEASG00005000388) Chiroptera ANCESTRAL SPECIES 16 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011.c ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B Megabat MODERN SPECIES 668 BBC3 (ENSPVAG00000005692) SAE1 (ENSPVAG00000005690) ZC3H4 (ENSPVAG00000005687) TMEM160 (ENSPVAG00000005685) NPAS1 (ENSPVAG00000005682) ARHGAP35 (ENSPVAG00000005679) AP2S1 (ENSPVAG00000005675) ##22 Microchiroptera ANCESTRAL SPECIES 18 ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011.c ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00950000183024.a.b.b ##17 ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 Greater horseshoe bat MODERN SPECIES 6 KPTN (ENSRFEG00010014307) SLC8A2 (ENSRFEG00010014268) MEIS3 (ENSRFEG00010014079) DHX34 (ENSRFEG00010014000) C5AR2 (ENSRFEG00010013977) ENSRFEG00010013958 C5AR1 (ENSRFEG00010013939) ENSRFEG00010013918 CCDC9 (ENSRFEG00010013812) ENSRFEG00010013509 SAE1 (ENSRFEG00010013378) ZC3H4 (ENSRFEG00010013266) TMEM160 (ENSRFEG00010013212) NPAS1 (ENSRFEG00010013143) ARHGAP35 (ENSRFEG00010013104) AP2S1 (ENSRFEG00010012755) ##22 SLC1A5 (ENSRFEG00010012525) FKRP (ENSRFEG00010012506) STRN4 (ENSRFEG00010012035) ##21 PRKD2 (ENSRFEG00010011924) ##17 DACT3 (ENSRFEG00010011826) ENSRFEG00010011776 PTGIR (ENSRFEG00010011682) CALM3 (ENSRFEG00010011490) PNMA8B (ENSRFEG00010011467) PNMA8C (ENSRFEG00010011452) PPP5C (ENSRFEG00010011335) HIF3A (ENSRFEG00010010703) IGFL1 (ENSRFEG00010010615) ENSRFEG00010010556 ENSRFEG00010010514 Microbat DUPLICATION Microbat MODERN SPECIES 762 ENSMLUG00000024372 ##22 Microbat MODERN SPECIES 1672 ENSMLUG00000003474 TMEM160 (ENSMLUG00000023661) ARHGAP35 (ENSMLUG00000003739) ENSMLUG00000027160 ##22 ENSMLUG00000022578 Actinopterygii ANCESTRAL SPECIES 437 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 Reedfish MODERN SPECIES ENSECRG00000000043 ENSECRG00000000042 RSPH4A (ENSECRG00000000041) SYMPK (ENSECRG00000000040) gemin7 (ENSECRG00000000039) bmp16 (ENSECRG00000000038) PTGIR (ENSECRG00000000037) ENSECRG00000000036 ENSECRG00000000035 ppm1nb (ENSECRG00000000034) ENSECRG00000000033 tmem160 (ENSECRG00000000032) ENSECRG00000000031 NPAS1 (ENSECRG00000000030) ARHGAP35 (ENSECRG00000000029) ap2s1 (ENSECRG00000000028) ##22 rab4b (ENSECRG00000000027) si:dkey-202l22.3 (ENSECRG00000000026) dhx34 (ENSECRG00000000024) ENSECRG00000000023 ENSECRG00000000022 ppp5c (ENSECRG00000000021) ENSECRG00000000020 ENSECRG00000000019 zgc:172282 (ENSECRG00000000018) lrfn1 (ENSECRG00000000017) ENSECRG00000000016 GMFG (ENSECRG00000000015) SAMD4B (ENSECRG00000000014) socs9 (ENSECRG00000000013) paf1 (ENSECRG00000000012) Neopterygii ANCESTRAL SPECIES 167 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000160599 ENSGT00940000164695 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.b.a.a ENSGT00390000018039 ENSGT00940000155666.d ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT01080000257562 ENSGT00940000156119 ENSGT00940000166238 ENSGT00390000003107.b Spotted gar MODERN SPECIES 658 dhx34 (ENSLOCG00000014928) fkrp (ENSLOCG00000017730) STRN4 (ENSLOCG00000014921) ##21 PRKD2 (ENSLOCG00000014916) ##17 gpr184 (ENSLOCG00000017729) si:dkey-202l22.3 (ENSLOCG00000017728) gng8 (ENSLOCG00000014913) sycn.2 (ENSLOCG00000017727) slc1a5 (ENSLOCG00000014907) EGLN2 (ENSLOCG00000014905) tmem160 (ENSLOCG00000014903) NPAS1 (ENSLOCG00000014899) ENSLOCG00000014893 ##28 ap2s1 (ENSLOCG00000014892) ##22 rab4b (ENSLOCG00000014888) rhoub (ENSLOCG00000014885) ENSLOCG00000014882 ppm1nb (ENSLOCG00000014876) PTGIR (ENSLOCG00000014873) ENSLOCG00000014870 ENSLOCG00000014867 ENSLOCG00000014864 gemin7 (ENSLOCG00000017726) bmp16 (ENSLOCG00000014862) ppp1r37 (ENSLOCG00000014857) si:ch211-191j22.3 (ENSLOCG00000014856) ENSLOCG00000014855 ENSLOCG00000014853 mrpl28 (ENSLOCG00000014850) Osteoglossocephalai ANCESTRAL SPECIES 82 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00980000202353 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00940000162930 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT01080000257562 Osteoglossiformes ANCESTRAL SPECIES 85 ENSGT01030000234517.H.a ENSGT00940000162008 ENSGT00530000063867.a.a ENSGT00530000063867.a.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b.k ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655.jb ENSGT00940000160655.kb ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000160599 ENSGT00940000164695.b ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868 P. kingsleyae MODERN SPECIES 139 si:dkey-202l22.3 (ENSPKIG00000009725) gpr184 (ENSPKIG00000009735) PRKD2 (ENSPKIG00000009768) ##17 fkrp (ENSPKIG00000009846) slc1a5 (ENSPKIG00000009870) ENSPKIG00000009905 tmem160 (ENSPKIG00000009924) NPAS1 (ENSPKIG00000009969) ARHGAP35 (ENSPKIG00000010061) ap2s1 (ENSPKIG00000010112) ##22 rab4b (ENSPKIG00000010138) rhoub (ENSPKIG00000010162) rtn2a (ENSPKIG00000010174) ppm1na (ENSPKIG00000010212) ENSPKIG00000010248 PTGIR (ENSPKIG00000010282) CALM3 (ENSPKIG00000010298) ppp1r37 (ENSPKIG00000010325) bmp16 (ENSPKIG00000010340) gemin7 (ENSPKIG00000010356) mrpl28 (ENSPKIG00000010370) RELB (ENSPKIG00000010400) ENSPKIG00000010447 ENSPKIG00000010483 clptm1 (ENSPKIG00000010548) Asian bonytongue MODERN SPECIES 1 ENSSFOG00015032566 DSCAML1 (ENSSFOG00015007641) ENSSFOG00015007584 ENSSFOG00015025233 ENSSFOG00015007544 si:dkey-202l22.3 (ENSSFOG00015007522) gpr184 (ENSSFOG00015031136) PRKD2 (ENSSFOG00015007435) ##17 STRN4 (ENSSFOG00015007351) ##21 fkrp (ENSSFOG00015007336) slc1a5 (ENSSFOG00015007290) ENSSFOG00015007263 tmem160 (ENSSFOG00015025662) NPAS1 (ENSSFOG00015007185) ENSSFOG00015007159 ##28 ap2s1 (ENSSFOG00015007132) ##22 rab4b (ENSSFOG00015007110) rhoub (ENSSFOG00015026737) rtn2a (ENSSFOG00015007054) ppm1na (ENSSFOG00015007029) PTGIR (ENSSFOG00015007014) ENSSFOG00015006993 ppp1r37 (ENSSFOG00015006918) bmp16 (ENSSFOG00015026725) gemin7 (ENSSFOG00015029458) mrpl28 (ENSSFOG00015006866) ENSSFOG00015006850 clptm1 (ENSSFOG00015006801) ENSSFOG00015006775 ENSSFOG00015006784 tbcb (ENSSFOG00015006769) Clupeocephala ANCESTRAL SPECIES 117 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.b.a.a.e.b.a.a ENSGT00390000018039 ENSGT00940000155666.d ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 ENSGT00940000166238.a ENSGT00940000158292.b Otomorpha ANCESTRAL SPECIES 44 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00940000159485 ENSGT00390000017583 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00940000166868.b Clupeiformes ANCESTRAL SPECIES 49 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00980000202353 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.b.a.a.f ENSGT00940000166868.b ENSGT00940000164056 ENSGT00980000199080 ENSGT00940000158234 ENSGT00940000167036 ENSGT00940000153881.b Atlantic herring MODERN SPECIES 25 slc25a27 (ENSCHAG00000021923) ENSCHAG00000022231 DSCAML1 (ENSCHAG00000002307) ENSCHAG00000002364 ENSCHAG00000002476 si:dkey-202l22.3 (ENSCHAG00000002598) gpr184 (ENSCHAG00000003183) PRKD2 (ENSCHAG00000003291) ##17 STRN4 (ENSCHAG00000006142) ##21 fkrp (ENSCHAG00000006507) slc1a5 (ENSCHAG00000006538) ENSCHAG00000006556 tmem160 (ENSCHAG00000006585) NPAS1 (ENSCHAG00000006603) ARHGAP35 (ENSCHAG00000006647) ap2s1 (ENSCHAG00000006660) ##22 rab4b (ENSCHAG00000006794) rhoub (ENSCHAG00000007057) rtn2a (ENSCHAG00000007074) ppm1na (ENSCHAG00000007094) ENSCHAG00000007241 PTGIR (ENSCHAG00000007250) ENSCHAG00000007264 ENSCHAG00000007444 ENSCHAG00000007469 ENSCHAG00000007488 ENSCHAG00000007502 ENSCHAG00000007754 SHKBP1 (ENSCHAG00000007793) ENSCHAG00000008919 ENSCHAG00000008938 Denticle herring MODERN SPECIES 10 fxyd6 (ENSDCDG00000034661) ENSDCDG00000034663 DSCAML1 (ENSDCDG00000034697) ENSDCDG00000034784 ENSDCDG00000034785 si:dkey-202l22.3 (ENSDCDG00000034786) gpr184 (ENSDCDG00000034787) PRKD2 (ENSDCDG00000034789) ##17 STRN4 (ENSDCDG00000034848) ##21 fkrp (ENSDCDG00000034905) slc1a5 (ENSDCDG00000034908) ENSDCDG00000034911 tmem160 (ENSDCDG00000034912) ENSDCDG00000034915 ENSDCDG00000034916 ##28 ap2s1 (ENSDCDG00000034918) ##22 rab4b (ENSDCDG00000034923) rhoub (ENSDCDG00000034931) rtn2a (ENSDCDG00000034934) ppm1na (ENSDCDG00000034936) PTGIR (ENSDCDG00000034939) ENSDCDG00000034940 ENSDCDG00000034949 ENSDCDG00000034951 ENSDCDG00000034954 LTBP4 (ENSDCDG00000034975) ENSDCDG00000035143 SHKBP1 (ENSDCDG00000035165) hif1al (ENSDCDG00000035274) ENSDCDG00000035291 IGSF10 (ENSDCDG00000035292) Otophysi ANCESTRAL SPECIES 69 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00940000166868.b ENSGT00940000157960.j ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Characiphysae ANCESTRAL SPECIES 39 ENSGT00940000158029 ENSGT00950000183096.a.a.c.a ENSGT00390000004155 ENSGT00530000063751.b.j ENSGT00950000183101.a.a ENSGT00940000161117 ENSGT00390000015210 ENSGT00940000157915 ENSGT01100000263573.a.b ENSGT00940000153576.c.b.w ENSGT00940000157119.a ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00940000157960.j ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B Characiphysae_b ANCESTRAL SPECIES 38 ENSGT00940000158029 ENSGT00950000183096.a.a.c.a ENSGT00390000004155 ENSGT00530000063751.b.j ENSGT00950000183101.a.a ENSGT00940000161117 ENSGT00390000015210 ENSGT00940000157915 ENSGT01100000263573.a.b ENSGT00940000153576.c.b.w ENSGT00940000157119.a ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00390000017365.b.mc Characoidei ANCESTRAL SPECIES 53 ENSGT00940000158029 ENSGT00950000183096.a.a.c.a ENSGT00390000004155 ENSGT00530000063751.b.j ENSGT00950000183101.a.a ENSGT00940000161117 ENSGT00390000015210 ENSGT00940000157915 ENSGT01100000263573.a.b ENSGT00940000153576.c.b.w ENSGT00940000157119.a ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00390000017365.b.mc Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 5198 ap2s1 (ENSPNAG00000029508) ##22 Red-bellied piranha MODERN SPECIES 3218 ap2s1 (ENSPNAG00000027059) ##22 Red-bellied piranha MODERN SPECIES 2531 ap2s1 (ENSPNAG00000014054) ##22 Red-bellied piranha MODERN SPECIES 46 foxn1 (ENSPNAG00000009071) slc46a1 (ENSPNAG00000001284) sarm1 (ENSPNAG00000009102) vtna (ENSPNAG00000009118) SCARF1 (ENSPNAG00000009134) ENSPNAG00000009147 prpf8 (ENSPNAG00000009247) myo1cb (ENSPNAG00000009340) ENSPNAG00000009368 SLC43A2 (ENSPNAG00000009438) pitpnaa (ENSPNAG00000009460) EGLN2 (ENSPNAG00000009484) tmem160 (ENSPNAG00000009494) NPAS1 (ENSPNAG00000009545) ARHGAP35 (ENSPNAG00000009576) ap2s1 (ENSPNAG00000009596) ##22 rab4b (ENSPNAG00000009616) rhoub (ENSPNAG00000009625) rtn2a (ENSPNAG00000009651) ppm1na (ENSPNAG00000009674) ENSPNAG00000009702 PTGIR (ENSPNAG00000009713) slc37a4a (ENSPNAG00000009765) trappc4 (ENSPNAG00000009737) RPS25 (ENSPNAG00000009781) sgcg (ENSPNAG00000009834) SACS (ENSPNAG00000009883) MIPEP (ENSPNAG00000009947) ENSPNAG00000009973 bach1a (ENSPNAG00000009992) cadm2b (ENSPNAG00000005237) Mexicana tetra MODERN SPECIES bag6 (ENSAMXG00000020231) ENSAMXG00000025279 tspan13a (ENSAMXG00000036610) vtna (ENSAMXG00000032441) SCARF1 (ENSAMXG00000033634) ENSAMXG00000042382 prpf8 (ENSAMXG00000020291) myo1cb (ENSAMXG00000020294) ENSAMXG00000041565 SLC43A2 (ENSAMXG00000034238) pitpnaa (ENSAMXG00000029804) ENSAMXG00000029242 tmem160 (ENSAMXG00000033513) ENSAMXG00000035527 ENSAMXG00000020331 ##28 ap2s1 (ENSAMXG00000041811) ##22 rab4b (ENSAMXG00000020339) rhoub (ENSAMXG00000033298) rtn2a (ENSAMXG00000041754) ENSAMXG00000035573 trappc4 (ENSAMXG00000044039) ENSAMXG00000035916 sgcg (ENSAMXG00000031286) SACS (ENSAMXG00000015179) tnfrsf19 (ENSAMXG00000032587) MIPEP (ENSAMXG00000015122) ENSAMXG00000015091 bach1a (ENSAMXG00000015064) cadm2b (ENSAMXG00000015024) GBE1 (ENSAMXG00000009839) SLC7A1 (ENSAMXG00000009846) Electric eel MODERN SPECIES 178 ENSEEEG00000020646 ##28 ap2s1 (ENSEEEG00000020640) ##22 rab4b (ENSEEEG00000020576) rhoub (ENSEEEG00000020575) rtn2a (ENSEEEG00000020574) ENSEEEG00000020573 ENSEEEG00000020572 PTGIR (ENSEEEG00000020570) calm3a (ENSEEEG00000020432) slc37a4a (ENSEEEG00000020423) trappc4 (ENSEEEG00000020417) ENSEEEG00000020416 sgcg (ENSEEEG00000020412) ENSEEEG00000020411 ENSEEEG00000020409 ENSEEEG00000020406 tnfrsf19 (ENSEEEG00000020404) Channel catfish MODERN SPECIES 8 foxn1 (ENSIPUG00000023292) slc46a1 (ENSIPUG00000023281) sarm1 (ENSIPUG00000023276) VTN (ENSIPUG00000023271) SCARF1 (ENSIPUG00000023263) rilp (ENSIPUG00000023256) prpf8 (ENSIPUG00000023230) MYO1C (ENSIPUG00000023174) ENSIPUG00000023166 slc43a2 (ENSIPUG00000023155) PITPNA (ENSIPUG00000023132) ENSIPUG00000023129 tmem160 (ENSIPUG00000023123) ENSIPUG00000023117 arhgap35 (ENSIPUG00000023110) ##28 ap2s1 (ENSIPUG00000023106) ##22 rab4b (ENSIPUG00000023086) Rhou (ENSIPUG00000023082) rtn2a (ENSIPUG00000021737) ppm1na (ENSIPUG00000021724) ENSIPUG00000021714 PTGIR (ENSIPUG00000021710) CALM (ENSIPUG00000021682) ENSIPUG00000021674 slc37a4 (ENSIPUG00000021638) trappc4 (ENSIPUG00000021653) sgcg (ENSIPUG00000021623) sacs (ENSIPUG00000021608) tnfrsf19 (ENSIPUG00000021592) mipep (ENSIPUG00000021503) ENSIPUG00000021486 Cyprinoidei ANCESTRAL SPECIES 106 ENSGT00940000155349.c ENSGT00390000017040.n ENSGT00940000155947.a ENSGT00940000167916 ENSGT00940000158923.f ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.a ENSGT00940000166868.b ENSGT00730000111086 ENSGT00940000153761.B ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000157792 ENSGT01030000234618.D ENSGT00990000210146 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 340 ENSGT00940000160655.fb.b.b ENSGT00390000012863.b ENSGT00940000161295.db ENSGT01030000234635.a.b.a.b.b.a.b.e.b ENSGT00970000193421.A.y ##22 ENSGT00940000159399.a ENSGT00940000165900.e ENSGT00940000167260.a ENSGT00940000164695.a.j ENSGT00940000167255 ENSGT01050000244902.b.d.d ENSGT00950000182980.a.b.b.a.b.b.a.b ENSGT00730000111086.b ENSGT00940000153761.B ENSGT00940000159187.c ENSGT00390000016695.s ENSGT00940000157792.l ENSGT01030000234566.e.b.b.a.i.a ENSGT00940000154730.b.a.b ENSGT00980000198746 Goldfish MODERN SPECIES 34 arl4aa (ENSCARG00000065233) tmem106ba (ENSCARG00000065226) ENSCARG00000065222 mag (ENSCARG00000065202) tekt1 (ENSCARG00000065187) inpp5ka (ENSCARG00000064935) ENSCARG00000064820 ENSCARG00000064804 PDS5B (ENSCARG00000062370) trmt9b (ENSCARG00000062269) timd4 (ENSCARG00000062260) ENSCARG00000062213 tmem160 (ENSCARG00000062186) NPAS1 (ENSCARG00000062140) ARHGAP35 (ENSCARG00000062124) ap2s1 (ENSCARG00000062039) ##22 ENSCARG00000062033 rab4b (ENSCARG00000061971) rhoub (ENSCARG00000061958) rtn2a (ENSCARG00000061932) ppm1na (ENSCARG00000061911) ENSCARG00000061894 PTGIR (ENSCARG00000061886) calm3a (ENSCARG00000061836) slc37a4a (ENSCARG00000061823) trappc4 (ENSCARG00000061749) sgcg (ENSCARG00000061671) GAB2 (ENSCARG00000061619) ENSCARG00000061613 tenm4 (ENSCARG00000060411) msi2b (ENSCARG00000060280) Cyprininae_a ANCESTRAL SPECIES 153 ENSGT00940000162008.d ENSGT01100000263537.b.b.c.b.l.a ENSGT00950000183024.a.b.b.f ##17 ENSGT00950000183095.a.b.a.b.a.z.b ##21 ENSGT00390000017583.g ENSGT00940000159485.c ENSGT00940000155349.c.a ENSGT00390000017040.n.a ENSGT00940000155947.a.d ENSGT00940000158923.f.a.b ENSGT00950000183171.B.x.a ENSGT00940000153259.a.a.b.f ENSGT00940000160655.fb.a ENSGT00390000012863.b ENSGT01030000234635.a.b.a.b.b.a.b.e.b ENSGT00970000193421.A.y ##22 ENSGT00940000159399.a ENSGT00940000165900.e ENSGT00940000167260.a ENSGT00940000164695.a.j ENSGT00940000167255 ENSGT01050000244902.b.d.d ENSGT00950000182980.a.b.b.a.b.b.a.b ENSGT00730000111086.b ENSGT00940000153761.B ENSGT00940000159187.c ENSGT00390000016695.s ENSGT00940000157792.l ENSGT01030000234618.D.b ENSGT00990000210146 ENSGT01030000234566.e.b.b.a.i.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 155 gpr184 (ENSSGRG00000053131) PRKD2 (ENSSGRG00000052975) ##17 STRN4 (ENSSGRG00000052955) ##21 fkrp (ENSSGRG00000052949) slc1a5 (ENSSGRG00000052945) SLC7A1 (ENSSGRG00000052914) GBE1 (ENSSGRG00000052680) cadm2b (ENSSGRG00000052669) ENSSGRG00000052668 MIPEP (ENSSGRG00000052667) tnfrsf19 (ENSSGRG00000052665) ENSSGRG00000052664 NPAS1 (ENSSGRG00000052662) ARHGAP35 (ENSSGRG00000052661) ap2s1 (ENSSGRG00000052659) ##22 ap2s1 (ENSSGRG00000052653) ##22 rab4b (ENSSGRG00000052651) Golden-line barbel MODERN SPECIES 1136 ap2s1 (ENSSGRG00000041046) ##22 rab4b (ENSSGRG00000040966) rhoub (ENSSGRG00000040961) rtn2a (ENSSGRG00000040960) rtn2a (ENSSGRG00000040938) ppm1na (ENSSGRG00000040937) ENSSGRG00000040936 PTGIR (ENSSGRG00000040935) Common carp reference MODERN SPECIES 39 ENSCCRG00000074595 PRKD2 (ENSCCRG00000011423) ##17 STRN4 (ENSCCRG00000029620) ##21 slc1a5 (ENSCCRG00000066758) fkrp (ENSCCRG00000074412) ENSCCRG00000017517 ENSCCRG00000018082 ENSCCRG00000061767 cadm2b (ENSCCRG00000033042) ENSCCRG00000033193 ENSCCRG00000033211 tnfrsf19 (ENSCCRG00000033192) ENSCCRG00000002499 tmem160 (ENSCCRG00000070899) ENSCCRG00000071465 ap2s1 (ENSCCRG00000082233) ##22 rab4b (ENSCCRG00000065295) rhoub (ENSCCRG00000035240) rtn2a (ENSCCRG00000035237) ppm1na (ENSCCRG00000074336) ENSCCRG00000035232 ENSCCRG00000074361 calm3a (ENSCCRG00000017811) slc37a4a (ENSCCRG00000048695) trappc4 (ENSCCRG00000048708) sgcg (ENSCCRG00000025095) ENSCCRG00000068170 GAB2 (ENSCCRG00000025102) nars2 (ENSCCRG00000058508) ENSCCRG00000079602 tenm4 (ENSCCRG00000052510) Cyprininae ANCESTRAL SPECIES 77 ENSGT00950000183095.a.b.a.b.a.z.a ##21 ENSGT00390000017583.h ENSGT00940000159485.d ENSGT00940000155349.c.b ENSGT00390000017040.n.b ENSGT00940000155947.a.c ENSGT00940000158923.f.b ENSGT00940000167916.b.b ENSGT00940000158923.f.a.a ENSGT00950000183171.B.x.b ENSGT00940000153259.a.a.b.e ENSGT00940000160655.fb.b.a ENSGT00390000012863.a ENSGT00940000161295.cb ENSGT01030000234635.a.b.a.b.b.a.b.e.a ENSGT00970000193421.A.z ##22 ENSGT00940000159399.b ENSGT00940000165900.f ENSGT00940000167260.b ENSGT00940000164695.a.i ENSGT01050000244902.b.d.c ENSGT00950000182980.a.b.b.a.b.b.a.a ENSGT00940000157960.j ENSGT00730000111086.a ENSGT00940000159187.d ENSGT00390000016695.t ENSGT00940000157792.k ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b ENSGT01030000234618.D ENSGT01030000234566.e.b.b.a.i.b ENSGT00940000154730.b.b Goldfish MODERN SPECIES 6 STRN4 (ENSCARG00000058769) ##21 fkrp (ENSCARG00000058824) slc1a5 (ENSCARG00000058834) ENSCARG00000058879 SLC7A1 (ENSCARG00000058903) GBE1 (ENSCARG00000059079) cadm2b (ENSCARG00000060168) ENSCARG00000060898 ENSCARG00000060916 ENSCARG00000060939 tnfrsf19 (ENSCARG00000061108) ENSCARG00000061139 tmem160 (ENSCARG00000061174) NPAS1 (ENSCARG00000061204) ARHGAP35 (ENSCARG00000061274) ap2s1 (ENSCARG00000061326) ##22 rab4b (ENSCARG00000061561) rhoub (ENSCARG00000061608) rtn2a (ENSCARG00000061609) ppm1na (ENSCARG00000061639) PTGIR (ENSCARG00000061645) calm3a (ENSCARG00000061657) ENSCARG00000061709 slc37a4a (ENSCARG00000061723) ENSCARG00000061750 sgcg (ENSCARG00000061753) SACS (ENSCARG00000061790) GAB2 (ENSCARG00000061806) ENSCARG00000061816 nars2 (ENSCARG00000061831) tenm4 (ENSCARG00000036674) Cyprininae_a ANCESTRAL SPECIES 92 ENSGT01100000263537.b.b.c.b.l.b ENSGT00950000183024.a.b.b.e ##17 ENSGT00950000183095.a.b.a.b.a.z.a ##21 ENSGT00390000017583.h ENSGT00940000159485.d ENSGT00940000155349.c.b ENSGT00390000017040.n.b ENSGT00940000155947.a.c ENSGT00940000158923.f.b ENSGT00950000183171.B.x.b ENSGT00940000153259.a.a.b.e ENSGT00940000160655.fb.b.a ENSGT00390000012863.a ENSGT00940000161295.cb ENSGT01030000234635.a.b.a.b.b.a.b.e.a ENSGT00970000193421.A.z ##22 ENSGT00940000159399.b ENSGT00940000165900.f ENSGT00940000167260.b ENSGT00940000164695.a.i ENSGT01050000244902.b.d.c ENSGT00950000182980.a.b.b.a.b.b.a.a ENSGT00940000157960.j ENSGT00730000111086.a ENSGT00940000159187.d ENSGT00390000016695.t ENSGT00940000157792.k ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b ENSGT01030000234618.D.a ENSGT01030000234566.e.b.b.a.i.b ENSGT00940000154730.b.b Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 4539 ap2s1 (ENSSGRG00000004171) ##22 Golden-line barbel MODERN SPECIES 155 si:dkey-202l22.3 (ENSSGRG00000053132) gpr184 (ENSSGRG00000053131) PRKD2 (ENSSGRG00000052975) ##17 STRN4 (ENSSGRG00000052955) ##21 fkrp (ENSSGRG00000052949) slc1a5 (ENSSGRG00000052945) SLC7A1 (ENSSGRG00000052914) GBE1 (ENSSGRG00000052680) cadm2b (ENSSGRG00000052669) ENSSGRG00000052668 MIPEP (ENSSGRG00000052667) tnfrsf19 (ENSSGRG00000052665) ENSSGRG00000052664 NPAS1 (ENSSGRG00000052662) ARHGAP35 (ENSSGRG00000052661) ap2s1 (ENSSGRG00000052659) ##22 ap2s1 (ENSSGRG00000052653) ##22 rab4b (ENSSGRG00000052651) Common carp reference MODERN SPECIES 26 fkrp (ENSCCRG00000065093) slc1a5 (ENSCCRG00000063552) ENSCCRG00000080308 ENSCCRG00000069438 ENSCCRG00000047980 ENSCCRG00000066952 cadm2b (ENSCCRG00000001774) ENSCCRG00000074872 bach1a (ENSCCRG00000042110) ENSCCRG00000063070 tnfrsf19 (ENSCCRG00000029306) ENSCCRG00000029313 tmem160 (ENSCCRG00000080603) NPAS1 (ENSCCRG00000049191) ARHGAP35 (ENSCCRG00000067045) ap2s1 (ENSCCRG00000016318) ##22 rab4b (ENSCCRG00000016263) rhoub (ENSCCRG00000016251) rtn2a (ENSCCRG00000016248) ppm1na (ENSCCRG00000016244) ENSCCRG00000044563 calm3a (ENSCCRG00000077426) ENSCCRG00000074284 slc37a4a (ENSCCRG00000025085) ENSCCRG00000025092 sgcg (ENSCCRG00000081030) ENSCCRG00000073630 GAB2 (ENSCCRG00000077537) ENSCCRG00000052500 nars2 (ENSCCRG00000081751) tenm4 (ENSCCRG00000025212) Zebrafish MODERN SPECIES 6 foxl2a (ENSDARG00000042180) PIK3CB (ENSDARG00000075253) her8.2 (ENSDARG00000069675) her13 (ENSDARG00000007097) SLC7A1 (ENSDARG00000100227) GBE1 (ENSDARG00000099524) cadm2b (ENSDARG00000062633) bach1a (ENSDARG00000062553) MIPEP (ENSDARG00000055344) tnfrsf19 (ENSDARG00000041869) ENSDARG00000087835 EGLN2 (ENSDARG00000062562) tmem160 (ENSDARG00000069649) npas1 (ENSDARG00000015876) ARHGAP35 (ENSDARG00000062577) ap2s1 (ENSDARG00000026967) ##22 rab4b (ENSDARG00000012177) rhoub (ENSDARG00000012968) rtn2a (ENSDARG00000016088) ppm1na (ENSDARG00000010231) ENSDARG00000057504 PTGIR (ENSDARG00000038278) calm3a (ENSDARG00000100825) ENSDARG00000097085 slc37a4a (ENSDARG00000038106) trappc4 (ENSDARG00000027418) sgcg (ENSDARG00000038107) SACS (ENSDARG00000091042) ENSDARG00000116297 GAB2 (ENSDARG00000105120) nars2 (ENSDARG00000098441) Euteleosteomorpha ANCESTRAL SPECIES 55 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00940000162930 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 Protacanthopterygii ANCESTRAL SPECIES 7 ENSGT01030000234872 ENSGT00960000187503 ENSGT00940000155354.a ENSGT00980000202353 ENSGT00940000154390.B ENSGT00940000162008.e.a ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399.c.b ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b.c ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 Salmoninae ANCESTRAL SPECIES 26 ENSGT00960000187503.a ENSGT00940000155354.a.c ENSGT00940000155354.a.d ENSGT00980000202353 ENSGT00940000162008.e.a.b ENSGT01100000263537.b.b.c.b.g ENSGT00950000183024.a.b.b.i ##17 ENSGT00950000183095.a.b.a.b.a.q ##21 ENSGT00390000017583.e ENSGT00940000159485.j ENSGT00940000160655.w.b ENSGT00390000012863.c ENSGT00940000161295.n.a ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00970000193421.A ##22 ENSGT00940000159399.c.b.b ENSGT00940000165900.d ENSGT00940000167260.c ENSGT00940000164695.a.g ENSGT00940000167255 ENSGT01050000244902.b.d.e ENSGT00950000182980.a.b.b.a.b.b.c.b ENSGT00390000018039.p ENSGT00940000155666.d.a ENSGT00940000157454.rc.b ENSGT00940000156484.a.c ENSGT00390000017359.k ENSGT00940000160230.m.b ENSGT00530000063461.B.a ENSGT01010000224936 Huchen DUPLICATION Huchen MODERN SPECIES 645 ap2s1 (ENSHHUG00000041863) ##22 rab4b (ENSHHUG00000041633) rhoub (ENSHHUG00000041624) rtn2a (ENSHHUG00000041595) ppm1na (ENSHHUG00000041586) PTGIR (ENSHHUG00000041583) ENSHHUG00000041429 gemin7 (ENSHHUG00000041427) bmp16 (ENSHHUG00000041353) ppp1r37 (ENSHHUG00000041350) ENSHHUG00000041349 ENSHHUG00000041348 mrpl28 (ENSHHUG00000041331) ENSHHUG00000041319 Huchen MODERN SPECIES 31 DSCAML1 (ENSHHUG00000004925) si:dkey-202l22.3 (ENSHHUG00000004919) ENSHHUG00000004917 gpr184 (ENSHHUG00000004912) PRKD2 (ENSHHUG00000004711) ##17 STRN4 (ENSHHUG00000004590) ##21 fkrp (ENSHHUG00000004577) slc1a5 (ENSHHUG00000004571) ENSHHUG00000004554 tmem160 (ENSHHUG00000004544) ARHGAP35 (ENSHHUG00000004527) ENSHHUG00000004517 ap2s1 (ENSHHUG00000004485) ##22 rab4b (ENSHHUG00000004327) rhoub (ENSHHUG00000004325) rtn2a (ENSHHUG00000004319) ppm1na (ENSHHUG00000004316) ENSHHUG00000004312 PTGIR (ENSHHUG00000004308) ENSHHUG00000003845 gemin7 (ENSHHUG00000003837) bmp16 (ENSHHUG00000003835) ppp1r37 (ENSHHUG00000003826) ENSHHUG00000003816 mrpl28 (ENSHHUG00000003803) ENSHHUG00000003796 clptm1 (ENSHHUG00000003638) ENSHHUG00000003632 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00510000054245.d ENSGT00940000159197.g.a.a ENSGT01030000234872.a ENSGT01030000234872.b.a ENSGT00940000155354.a.d ENSGT00940000162008.e.a.a ENSGT01100000263537.b.b.c.b.h ENSGT00950000183024.a.b.b.j ##17 ENSGT00950000183095.a.b.a.b.a.r ##21 ENSGT00390000017583.f ENSGT00940000159485.i ENSGT00940000160655.w.a ENSGT00390000012863.d ENSGT00940000161295.n.a ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00970000193421.A.bb ##22 ENSGT00940000159399.c.b.a ENSGT00940000165900.c ENSGT00940000167260.d ENSGT00940000164695.a.h ENSGT01050000244902.b.d.f ENSGT00950000182980.a.b.b.a.b.b.c.a ENSGT00390000018039.o ENSGT00940000155666.d.b ENSGT00940000157454.rc.a ENSGT00940000156484.a.d ENSGT00390000017359.l ENSGT00940000160230.m.a.b ENSGT00530000063461.B.b ENSGT00940000156119 ENSGT00940000166238.a.c Salmo ANCESTRAL SPECIES 22 ENSGT01030000234872.b.a ENSGT00960000187503.b ENSGT00940000155354.a.d ENSGT00980000202353 ENSGT00940000162008.e.a.a ENSGT01100000263537.b.b.c.b.h ENSGT00950000183024.a.b.b.j ##17 ENSGT00950000183095.a.b.a.b.a.r ##21 ENSGT00390000017583.f ENSGT00940000159485.i ENSGT00940000160655.w.a ENSGT00390000012863.d ENSGT00940000161295.n.a.b ENSGT00940000161295.n.a.a ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00970000193421.A.bb ##22 ENSGT00940000159399.c.b.a ENSGT00940000165900.c ENSGT00940000167260.d ENSGT00940000164695.a.h ENSGT01050000244902.b.d.f ENSGT00950000182980.a.b.b.a.b.b.c.b ENSGT00390000018039.o ENSGT00940000155666.d.b ENSGT00940000157454.rc.a ENSGT00940000156484.a.d ENSGT00390000017359.l ENSGT00940000160230.m.a.b ENSGT00530000063461.B.b ENSGT00940000156119 ENSGT00940000166238.a.c Atlantic salmon MODERN SPECIES 28 il10ra (ENSSSAG00000086953) ENSSSAG00000100830 ENSSSAG00000052680 ENSSSAG00000109627 si:dkey-202l22.3 (ENSSSAG00000002189) gpr184 (ENSSSAG00000090885) PRKD2 (ENSSSAG00000002560) ##17 ENSSSAG00000099064 STRN4 (ENSSSAG00000089805) ##21 fkrp (ENSSSAG00000112023) slc1a5 (ENSSSAG00000106214) egln2 (ENSSSAG00000052632) tmem160 (ENSSSAG00000105319) NPAS1 (ENSSSAG00000052649) ARHGAP35 (ENSSSAG00000088356) AP2S1 (ENSSSAG00000049632) ##22 rab4b (ENSSSAG00000112839) rhoub (ENSSSAG00000093611) rtn2 (ENSSSAG00000050238) ppm1na (ENSSSAG00000114761) ENSSSAG00000098660 calm2a (ENSSSAG00000100630) ptgir (ENSSSAG00000050308) gemin7 (ENSSSAG00000050696) ENSSSAG00000101396 ppp1r37 (ENSSSAG00000050748) mrpl28 (ENSSSAG00000052408) relb (ENSSSAG00000052551) clptm1 (ENSSSAG00000005391) tbcb (ENSSSAG00000005371) six5 (ENSSSAG00000120633) River trout MODERN SPECIES 4 TMPRSS13 (ENSSTUG00000002226) ENSSTUG00000002188 ENSSTUG00000002167 ENSSTUG00000002157 DSCAML1 (ENSSTUG00000002008) si:dkey-202l22.3 (ENSSTUG00000001958) gpr184 (ENSSTUG00000001949) PRKD2 (ENSSTUG00000001609) ##17 STRN4 (ENSSTUG00000001534) ##21 fkrp (ENSSTUG00000001521) slc1a5 (ENSSTUG00000001501) ENSSTUG00000001486 tmem160 (ENSSTUG00000001468) NPAS1 (ENSSTUG00000001462) ARHGAP35 (ENSSTUG00000001456) ap2s1 (ENSSTUG00000001378) ##22 rab4b (ENSSTUG00000001302) rhoub (ENSSTUG00000001068) rtn2a (ENSSTUG00000023138) ppm1na (ENSSTUG00000023117) PTGIR (ENSSTUG00000023110) ENSSTUG00000022999 ENSSTUG00000022993 gemin7 (ENSSTUG00000022970) bmp16 (ENSSTUG00000022832) ppp1r37 (ENSSTUG00000022547) ENSSTUG00000022525 mrpl28 (ENSSTUG00000022510) ENSSTUG00000022496 clptm1 (ENSSTUG00000022422) tbcb (ENSSTUG00000022404) Oncorhynchus ANCESTRAL SPECIES 14 ENSGT01030000234556.b.b.a.a.c ENSGT00940000155207.a.a.c ENSGT00510000054245.d ENSGT00940000159197.g.a.a ENSGT01030000234872.a.a ENSGT00940000155354.a.d ENSGT00940000162008.e.a.a ENSGT01100000263537.b.b.c.b.h ENSGT00950000183024.a.b.b.j.a ##17 ENSGT00950000183095.a.b.a.b.a.r ##21 ENSGT00390000017583.f ENSGT00940000159485.i ENSGT00940000160655.w.a ENSGT00390000012863.d ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT00970000193421.A.bb ##22 ENSGT00940000159399.c.b.a ENSGT00940000165900.c ENSGT00940000167260.d ENSGT00940000164695.a.h ENSGT01050000244902.b.d.f ENSGT00950000182980.a.b.b.a.b.b.c.a ENSGT00940000155666.d.b ENSGT00940000157454.rc.a ENSGT00940000156484.a.d ENSGT00390000017359.l ENSGT00940000160230.m.a.b ENSGT00530000063461.B.b ENSGT00940000156119 ENSGT00940000166238.a.c ENSGT00940000158292.b.e Oncorhynchus_a ANCESTRAL SPECIES 41 ENSGT00940000161203.e ENSGT01030000234556.b.a.b.a ENSGT01030000234556.b.b.a.a.c ENSGT00940000155207.a.a.c ENSGT00510000054245.d ENSGT00940000159197.g.a.a ENSGT01030000234872.a.a ENSGT00940000162008.e.a.a ENSGT01100000263537.b.b.c.b.h ENSGT00950000183024.a.b.b.j.a ##17 ENSGT00950000183095.a.b.a.b.a.r ##21 ENSGT00390000017583.f ENSGT00940000159485.i ENSGT00940000160655.w.a ENSGT00390000012863.d ENSGT00970000193421.A.bb ##22 ENSGT00940000159399.c.b.a ENSGT00940000165900.c ENSGT00940000167260.d ENSGT00940000164695.a.h ENSGT01050000244902.b.d.f ENSGT00950000182980.a.b.b.a.b.b.c.a ENSGT00940000155666.d.b ENSGT00940000157454.rc.a ENSGT00940000156484.a.d ENSGT00390000017359.l ENSGT00940000160230.m.a.b ENSGT00530000063461.B.b ENSGT00940000156119 ENSGT00940000166238.a.c ENSGT00940000158292.b.e Chinook salmon MODERN SPECIES 5 spcs2 (ENSOTSG00005014698) abcg1 (ENSOTSG00005012351) ENSOTSG00005012341 DOCK10 (ENSOTSG00005011874) shox2 (ENSOTSG00005011738) si:dkey-202l22.3 (ENSOTSG00005015572) ENSOTSG00005015570 gpr184 (ENSOTSG00005015569) PRKD2 (ENSOTSG00005015564) ##17 STRN4 (ENSOTSG00005015563) ##21 fkrp (ENSOTSG00005015562) slc1a5 (ENSOTSG00005015561) ENSOTSG00005015560 ENSOTSG00005015559 ARHGAP35 (ENSOTSG00005015557) ap2s1 (ENSOTSG00005015531) ##22 rab4b (ENSOTSG00005015530) rhoub (ENSOTSG00005015528) rtn2a (ENSOTSG00005015526) ppm1na (ENSOTSG00005015525) PTGIR (ENSOTSG00005015523) ENSOTSG00005015521 ENSOTSG00005015328 ENSOTSG00005015326 bmp16 (ENSOTSG00005015323) ppp1r37 (ENSOTSG00005015319) ENSOTSG00005015316 mrpl28 (ENSOTSG00005015315) ENSOTSG00005015314 ENSOTSG00005015313 eomesa (ENSOTSG00005015312) Coho salmon MODERN SPECIES 9 ENSOKIG00005047466 il10ra (ENSOKIG00005047485) ENSOKIG00005047498 ENSOKIG00005047511 ENSOKIG00005047515 si:dkey-202l22.3 (ENSOKIG00005047520) gpr184 (ENSOKIG00005047525) PRKD2 (ENSOKIG00005047551) ##17 STRN4 (ENSOKIG00005047682) ##21 fkrp (ENSOKIG00005047730) slc1a5 (ENSOKIG00005047738) ENSOKIG00005047770 tmem160 (ENSOKIG00005047779) ENSOKIG00005047792 NPAS1 (ENSOKIG00005047796) ap2s1 (ENSOKIG00005047804) ##22 rab4b (ENSOKIG00005047835) rhoub (ENSOKIG00005047880) rtn2a (ENSOKIG00005047889) ppm1na (ENSOKIG00005047912) PTGIR (ENSOKIG00005047918) ENSOKIG00005047928 bmp16 (ENSOKIG00005047983) ENSOKIG00005047993 ppp1r37 (ENSOKIG00005048009) ENSOKIG00005048077 mrpl28 (ENSOKIG00005048088) ENSOKIG00005048105 ENSOKIG00005048109 clptm1 (ENSOKIG00005048128) tbcb (ENSOKIG00005048314) Rainbow trout MODERN SPECIES 16 si:dkey-202l22.3 (ENSOMYG00000027592) gpr184 (ENSOMYG00000027612) PRKD2 (ENSOMYG00000027792) ##17 ENSOMYG00000057277 STRN4 (ENSOMYG00000028883) ##21 fkrp (ENSOMYG00000029027) slc1a5 (ENSOMYG00000029048) ENSOMYG00000057648 ENSOMYG00000059274 ENSOMYG00000061195 ENSOMYG00000029100 ENSOMYG00000056560 NPAS1 (ENSOMYG00000029180) ENSOMYG00000049025 ENSOMYG00000029220 ap2s1 (ENSOMYG00000029325) ##22 rab4b (ENSOMYG00000029382) ENSOMYG00000058206 ENSOMYG00000058174 rhoub (ENSOMYG00000029397) rtn2a (ENSOMYG00000029432) ppm1na (ENSOMYG00000029447) ENSOMYG00000029461 ENSOMYG00000029527 ENSOMYG00000074800 ENSOMYG00000057538 bmp16 (ENSOMYG00000029577) ENSOMYG00000029724 ENSOMYG00000029779 mrpl28 (ENSOMYG00000029790) ENSOMYG00000029822 Salmoninae_a ANCESTRAL SPECIES 19 ENSGT00940000153062.B ENSGT00960000187503.a ENSGT00940000155354.a.c ENSGT00980000202353 ENSGT00940000162008.e.a.b ENSGT01100000263537.b.b.c.b.g ENSGT00950000183024.a.b.b.i ##17 ENSGT00950000183095.a.b.a.b.a.q ##21 ENSGT00390000017583.e ENSGT00940000159485.j ENSGT00940000160655.w.b ENSGT00390000012863.c ENSGT00940000161295.o ENSGT00940000161295.n.b ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00970000193421.A.cb ##22 ENSGT00940000159399.c.b.b ENSGT00940000165900.d ENSGT00940000167260.c ENSGT00940000164695.a.g ENSGT00940000167255 ENSGT01050000244902.b.d.e ENSGT00950000182980.a.b.b.a.b.b.c.b ENSGT00390000018039.p ENSGT00940000155666.d.a ENSGT00940000157454.rc.b ENSGT00940000156484.a.c ENSGT00390000017359.k ENSGT00940000160230.m.a.a ENSGT00530000063461.B.a ENSGT01010000224936 Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00940000159197.g.a.b ENSGT01030000234872.b.b ENSGT00960000187503.b ENSGT00940000155354.a.c ENSGT00980000202353 ENSGT00940000162008.e.a.b ENSGT01100000263537.b.b.c.b.g ENSGT00950000183024.a.b.b.i ##17 ENSGT00950000183095.a.b.a.b.a.q ##21 ENSGT00390000017583.e ENSGT00940000159485.j ENSGT00940000160655.w.b ENSGT00390000012863.c ENSGT00940000161295.n.a ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00970000193421.A.cb ##22 ENSGT00940000159399.c.b.b ENSGT00940000165900.d ENSGT00940000167260.c ENSGT00940000164695.a.g ENSGT00940000167255 ENSGT01050000244902.b.d.e ENSGT00950000182980.a.b.b.a.b.b.c.b ENSGT00390000018039.p ENSGT00940000155666.d.a ENSGT00940000157454.rc.b ENSGT00940000156484.a.c ENSGT00390000017359.k ENSGT00940000160230.m.a.a ENSGT00530000063461.B.a ENSGT01010000224936 Oncorhynchus_a ANCESTRAL SPECIES 59 ENSGT00940000155354.a.c ENSGT00980000202353 ENSGT00940000162008.e.a.b ENSGT01100000263537.b.b.c.b.g ENSGT00950000183024.a.b.b.i ##17 ENSGT00950000183095.a.b.a.b.a.q ##21 ENSGT00390000017583.e ENSGT00940000159485.j ENSGT00940000160655.w.b ENSGT00390000012863.c ENSGT00940000161295.n.a ENSGT01030000234635.a.b.a.b.b.a.b.a ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00970000193421.A.cb ##22 ENSGT00940000159399.c.b.b ENSGT00940000165900.d ENSGT00940000167260.c ENSGT00940000164695.a.g ENSGT00940000167255 ENSGT01050000244902.b.d.e ENSGT00950000182980.a.b.b.a.b.b.c.b ENSGT00390000018039.p ENSGT00940000155666.d.a ENSGT00940000157454.rc.b ENSGT00940000156484.a.c ENSGT00390000017359.k ENSGT00940000160230.m.a.a ENSGT00530000063461.B.a ENSGT01010000224936 Coho salmon MODERN SPECIES 6 SCN2B (ENSOKIG00005011668) scn4ba (ENSOKIG00005011649) ENSOKIG00005011597 il10ra (ENSOKIG00005011550) ENSOKIG00005011511 ENSOKIG00005011478 ENSOKIG00005011459 ENSOKIG00005011447 ##17 STRN4 (ENSOKIG00005010510) ##21 fkrp (ENSOKIG00005010469) slc1a5 (ENSOKIG00005010455) ENSOKIG00005010448 tmem160 (ENSOKIG00005010444) NPAS1 (ENSOKIG00005010441) ARHGAP35 (ENSOKIG00005010433) ap2s1 (ENSOKIG00005010352) ##22 rab4b (ENSOKIG00005010321) rhoub (ENSOKIG00005010309) rtn2a (ENSOKIG00005010286) ppm1na (ENSOKIG00005010273) ENSOKIG00005010262 PTGIR (ENSOKIG00005010261) ENSOKIG00005010225 ENSOKIG00005010216 gemin7 (ENSOKIG00005010213) bmp16 (ENSOKIG00005010205) ppp1r37 (ENSOKIG00005010148) ENSOKIG00005010132 mrpl28 (ENSOKIG00005010118) ENSOKIG00005010103 clptm1 (ENSOKIG00005009484) Chinook salmon MODERN SPECIES 4 ENSOTSG00005003774 ENSOTSG00005003771 TIMP2 (ENSOTSG00005003767) si:dkey-202l22.3 (ENSOTSG00005003765) gpr184 (ENSOTSG00005003762) PRKD2 (ENSOTSG00005003761) ##17 ENSOTSG00005003757 ##17 ENSOTSG00005003755 STRN4 (ENSOTSG00005001825) ##21 fkrp (ENSOTSG00005001620) slc1a5 (ENSOTSG00005043684) ENSOTSG00005043683 tmem160 (ENSOTSG00005043682) NPAS1 (ENSOTSG00005043681) ENSOTSG00005043680 ##28 ap2s1 (ENSOTSG00005043679) ##22 rab4b (ENSOTSG00005043678) rhoub (ENSOTSG00005043677) rtn2a (ENSOTSG00005043676) ppm1na (ENSOTSG00005043674) ENSOTSG00005043673 PTGIR (ENSOTSG00005043672) ENSOTSG00005043647 ENSOTSG00005043645 ENSOTSG00005043643 ARHGEF12 (ENSOTSG00005043640) tlcd5a (ENSOTSG00005043639) OAF (ENSOTSG00005043635) ENSOTSG00005043450 hepacama (ENSOTSG00005043439) NRGN (ENSOTSG00005043436) Rainbow trout MODERN SPECIES 19 ENSOMYG00000023094 ENSOMYG00000023056 ENSOMYG00000023032 ENSOMYG00000068572 ENSOMYG00000022837 si:dkey-202l22.3 (ENSOMYG00000022774) PRKD2 (ENSOMYG00000022753) ##17 STRN4 (ENSOMYG00000022684) ##21 fkrp (ENSOMYG00000022673) slc1a5 (ENSOMYG00000022652) ENSOMYG00000022630 tmem160 (ENSOMYG00000022620) ENSOMYG00000065488 NPAS1 (ENSOMYG00000069164) ARHGAP35 (ENSOMYG00000022615) ap2s1 (ENSOMYG00000022579) ##22 rab4b (ENSOMYG00000022476) rhoub (ENSOMYG00000022411) RTN2 (ENSOMYG00000022377) ppm1na (ENSOMYG00000022344) ENSOMYG00000022332 ENSOMYG00000022323 ENSOMYG00000022241 gemin7 (ENSOMYG00000022172) bmp16 (ENSOMYG00000022166) ppp1r37 (ENSOMYG00000022054) ENSOMYG00000021974 mrpl28 (ENSOMYG00000021960) ENSOMYG00000021944 ENSOMYG00000052183 clptm1 (ENSOMYG00000021855) Salmo ANCESTRAL SPECIES 7 ENSGT00940000155207.a.a.d ENSGT00510000054245.c ENSGT00940000159197.g.a.b ENSGT00940000153062.B ENSGT00960000187503.a ENSGT00940000155354.a.c ENSGT00940000162008.e.a.b ENSGT01100000263537.b.b.c.b.g ENSGT00950000183024.a.b.b.i ##17 ENSGT00950000183095.a.b.a.b.a.q ##21 ENSGT00390000017583.e ENSGT00940000159485.j ENSGT00940000160655.w.b ENSGT00940000161295.n.b ENSGT01030000234635.a.b.a.b.b.a.b.b ENSGT00970000193421.A.cb ##22 ENSGT00940000159399.c.b.b ENSGT00940000165900.d ENSGT00940000167260.c ENSGT00940000164695.a.g ENSGT00940000167255 ENSGT01050000244902.b.d.e ENSGT00940000164310 ENSGT00390000018039.p ENSGT00940000155666.d.a ENSGT00940000157454.rc.b ENSGT00940000156484.a.c ENSGT00390000017359.k ENSGT00940000160230.m.b ENSGT00530000063461.B.a ENSGT01010000224936 Atlantic salmon MODERN SPECIES 12 il10ra (ENSSSAG00000005513) TMPRSS13 (ENSSSAG00000099986) fxyd6 (ENSSSAG00000086766) ENSSSAG00000101627 DSCAML1 (ENSSSAG00000093451) ENSSSAG00000103338 si:dkey-202l22.3 (ENSSSAG00000086868) gpr184 (ENSSSAG00000087508) ENSSSAG00000112964 PRKD2 (ENSSSAG00000086083) ##17 STRN4 (ENSSSAG00000109664) ##21 fkrp (ENSSSAG00000099674) slc1a5 (ENSSSAG00000052580) ENSSSAG00000118656 ENSSSAG00000094430 ap2s1 (ENSSSAG00000083309) ##22 ARHGAP35 (ENSSSAG00000049601) rab4b (ENSSSAG00000049780) rhoub (ENSSSAG00000050214) ppm1na (ENSSSAG00000094609) rtn2a (ENSSSAG00000108689) ENSSSAG00000083390 ENSSSAG00000096827 ENSSSAG00000005656 ENSSSAG00000097830 gemin7 (ENSSSAG00000099823) bmp16 (ENSSSAG00000108574) ppp1r37 (ENSSSAG00000120388) ENSSSAG00000119715 RM28 (ENSSSAG00000120657) ENSSSAG00000092258 River trout MODERN SPECIES 18 il10ra (ENSSTUG00000012379) TMPRSS13 (ENSSTUG00000012347) ENSSTUG00000012339 ENSSTUG00000012323 ENSSTUG00000012302 DSCAML1 (ENSSTUG00000011503) si:dkey-202l22.3 (ENSSTUG00000011401) gpr184 (ENSSTUG00000011396) PRKD2 (ENSSTUG00000010154) ##17 STRN4 (ENSSTUG00000009897) ##21 fkrp (ENSSTUG00000009882) slc1a5 (ENSSTUG00000009863) ENSSTUG00000009822 NPAS1 (ENSSTUG00000009791) ARHGAP35 (ENSSTUG00000009783) ap2s1 (ENSSTUG00000009713) ##22 rab4b (ENSSTUG00000009675) rhoub (ENSSTUG00000009647) ppm1na (ENSSTUG00000009641) rtn2a (ENSSTUG00000009580) ENSSTUG00000009568 PTGIR (ENSSTUG00000009559) ENSSTUG00000009441 gemin7 (ENSSTUG00000009400) bmp16 (ENSSTUG00000009389) ppp1r37 (ENSSTUG00000009279) ENSSTUG00000009266 mrpl28 (ENSSTUG00000009251) ENSSTUG00000009239 clptm1 (ENSSTUG00000008777) ENSSTUG00000008698 Northern pike MODERN SPECIES TMPRSS13 (ENSELUG00000013355) fxyd6 (ENSELUG00000027900) ENSELUG00000000487 DSCAML1 (ENSELUG00000013428) ENSELUG00000000496 si:dkey-202l22.3 (ENSELUG00000013452) gpr184 (ENSELUG00000013456) PRKD2 (ENSELUG00000013565) ##17 STRN4 (ENSELUG00000013635) ##21 fkrp (ENSELUG00000001171) slc1a5 (ENSELUG00000013665) ENSELUG00000013701 tmem160 (ENSELUG00000013720) NPAS1 (ENSELUG00000034542) ARHGAP35 (ENSELUG00000013772) ap2s1 (ENSELUG00000013793) ##22 rab4b (ENSELUG00000013817) rhoub (ENSELUG00000013830) rtn2a (ENSELUG00000013859) ppm1na (ENSELUG00000013890) ENSELUG00000013934 PTGIR (ENSELUG00000013943) ENSELUG00000014007 gemin7 (ENSELUG00000014034) bmp16 (ENSELUG00000014051) ppp1r37 (ENSELUG00000000513) ENSELUG00000014075 mrpl28 (ENSELUG00000014104) ENSELUG00000000515 clptm1 (ENSELUG00000014159) tbcb (ENSELUG00000014206) Acanthomorphata ANCESTRAL SPECIES 8 ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00390000018039 ENSGT00940000155666.d ENSGT00970000195560 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 ENSGT00940000166238.a Cod MODERN SPECIES 7 ENSGMOG00000010567 ENSGMOG00000010582 ENSGMOG00000034590 si:dkey-202l22.3 (ENSGMOG00000000225) gpr184 (ENSGMOG00000000230) PRKD2 (ENSGMOG00000008026) ##17 STRN4 (ENSGMOG00000008035) ##21 fkrp (ENSGMOG00000009856) slc1a5 (ENSGMOG00000017099) ENSGMOG00000029048 ENSGMOG00000028678 ENSGMOG00000024686 ENSGMOG00000000134 ENSGMOG00000007858 ##28 ENSGMOG00000026149 ap2s1 (ENSGMOG00000001825) ##22 rab4b (ENSGMOG00000001834) rhoub (ENSGMOG00000030258) rtn2a (ENSGMOG00000019122) ppm1na (ENSGMOG00000034938) ENSGMOG00000022575 ENSGMOG00000019139 ENSGMOG00000029072 ENSGMOG00000019151 ENSGMOG00000024176 ENSGMOG00000019156 ENSGMOG00000034288 ENSGMOG00000036325 ENSGMOG00000036496 ENSGMOG00000032063 ENSGMOG00000033317 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00970000195560 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Pinecone sodierfish MODERN SPECIES 4 ENSMMDG00005011148 ENSMMDG00005011149 DSCAML1 (ENSMMDG00005011151) ENSMMDG00005011156 ENSMMDG00005011168 gpr184 (ENSMMDG00005011248) PRKD2 (ENSMMDG00005011320) ##17 STRN4 (ENSMMDG00005013890) ##21 fkrp (ENSMMDG00005013893) slc1a5 (ENSMMDG00005013896) ENSMMDG00005013898 ENSMMDG00005013899 tmem160 (ENSMMDG00005013900) NPAS1 (ENSMMDG00005013903) ARHGAP35 (ENSMMDG00005013906) ap2s1 (ENSMMDG00005013914) ##22 rab4b (ENSMMDG00005013995) rhoub (ENSMMDG00005014003) rtn2a (ENSMMDG00005014006) ENSMMDG00005014036 ppm1na (ENSMMDG00005014038) ENSMMDG00005014132 PTGIR (ENSMMDG00005014135) calm3a (ENSMMDG00005014140) ENSMMDG00005014207 gemin7 (ENSMMDG00005014211) bmp16 (ENSMMDG00005004472) ppp1r37 (ENSMMDG00005005222) mrpl28 (ENSMMDG00005005538) ENSMMDG00005005543 clptm1 (ENSMMDG00005005563) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00970000195560 ENSGT00940000156484.a ENSGT00390000017359 Tiger tail seahorse MODERN SPECIES 357 ENSHCOG00000006484 ENSHCOG00000006495 DSCAML1 (ENSHCOG00000006553) ENSHCOG00000006577 si:dkey-202l22.3 (ENSHCOG00000006590) gpr184 (ENSHCOG00000000194) PRKD2 (ENSHCOG00000006636) ##17 STRN4 (ENSHCOG00000006683) ##21 fkrp (ENSHCOG00000006696) slc1a5 (ENSHCOG00000006722) ENSHCOG00000006766 tmem160 (ENSHCOG00000006792) NPAS1 (ENSHCOG00000006869) ENSHCOG00000006895 ENSHCOG00000006914 ##28 ap2s1 (ENSHCOG00000006931) ##22 rab4b (ENSHCOG00000000208) rhoub (ENSHCOG00000006961) rtn2a (ENSHCOG00000006977) ppm1na (ENSHCOG00000006994) ENSHCOG00000007004 PTGIR (ENSHCOG00000007014) calm3a (ENSHCOG00000007031) gemin7 (ENSHCOG00000007043) bmp16 (ENSHCOG00000007049) ENSHCOG00000007061 ppp1r37 (ENSHCOG00000007120) mrpl28 (ENSHCOG00000000219) ENSHCOG00000007270 clptm1 (ENSHCOG00000000707) tbcb (ENSHCOG00000000238) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000176207 ENSGT00940000182393 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000176207 ENSGT00940000182393 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.q ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Bicolor damselfish MODERN SPECIES 430 ENSSPAG00000017333 cacna1sa (ENSSPAG00000016455) apobec2a (ENSSPAG00000016299) ENSSPAG00000016261 si:dkey-202l22.3 (ENSSPAG00000016228) gpr184 (ENSSPAG00000016220) PRKD2 (ENSSPAG00000016182) ##17 STRN4 (ENSSPAG00000016162) ##21 fkrp (ENSSPAG00000016153) slc1a5 (ENSSPAG00000016125) ENSSPAG00000016107 tmem160 (ENSSPAG00000016042) NPAS1 (ENSSPAG00000015981) ENSSPAG00000015953 ##28 ap2s1 (ENSSPAG00000015914) ##22 rab4b (ENSSPAG00000015871) rhoub (ENSSPAG00000015844) rtn2a (ENSSPAG00000015802) ppm1na (ENSSPAG00000015772) ENSSPAG00000015755 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000153062.B.j ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.q ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Amphiprion ANCESTRAL SPECIES 6 ENSGT00940000153062.B.j ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.q ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Orange clownfish MODERN SPECIES 23 ENSAPEG00000011902 ENSAPEG00000011889 DSCAML1 (ENSAPEG00000011746) ENSAPEG00000011719 ENSAPEG00000011687 ENSAPEG00000011648 gpr184 (ENSAPEG00000011643) PRKD2 (ENSAPEG00000011511) ##17 STRN4 (ENSAPEG00000011395) ##21 fkrp (ENSAPEG00000011378) slc1a5 (ENSAPEG00000011336) ENSAPEG00000011316 tmem160 (ENSAPEG00000011303) NPAS1 (ENSAPEG00000011225) ARHGAP35 (ENSAPEG00000011195) ap2s1 (ENSAPEG00000011184) ##22 rab4b (ENSAPEG00000011130) ENSAPEG00000011109 rhoub (ENSAPEG00000011089) rtn2a (ENSAPEG00000011030) ENSAPEG00000011018 ppm1na (ENSAPEG00000010976) ENSAPEG00000010941 PTGIR (ENSAPEG00000010934) calm3a (ENSAPEG00000010897) ENSAPEG00000010879 gemin7 (ENSAPEG00000010856) bmp16 (ENSAPEG00000010826) ENSAPEG00000010782 ppp1r37 (ENSAPEG00000010771) ENSAPEG00000010737 Clown anemonefish MODERN SPECIES 1748 ENSAOCG00000013771 gpr184 (ENSAOCG00000013783) PRKD2 (ENSAOCG00000013877) ##17 STRN4 (ENSAOCG00000013977) ##21 fkrp (ENSAOCG00000014001) slc1a5 (ENSAOCG00000014040) ENSAOCG00000014059 tmem160 (ENSAOCG00000014066) NPAS1 (ENSAOCG00000014111) ARHGAP35 (ENSAOCG00000014133) ap2s1 (ENSAOCG00000014146) ##22 rab4b (ENSAOCG00000014179) rhoub (ENSAOCG00000014198) Spiny chromis MODERN SPECIES 48 ENSAPOG00000017357 tmem160 (ENSAPOG00000017335) NPAS1 (ENSAPOG00000017306) ARHGAP35 (ENSAPOG00000017295) ap2s1 (ENSAPOG00000017271) ##22 rab4b (ENSAPOG00000017258) rhoub (ENSAPOG00000017216) rtn2a (ENSAPOG00000017202) ppm1na (ENSAPOG00000017178) ENSAPOG00000017041 PTGIR (ENSAPOG00000000955) calm3a (ENSAPOG00000016996) ENSAPOG00000016975 gemin7 (ENSAPOG00000016954) bmp16 (ENSAPOG00000016950) ENSAPOG00000016927 ppp1r37 (ENSAPOG00000016897) ENSAPOG00000000460 mrpl28 (ENSAPOG00000016883) ENSAPOG00000016851 Cichlidae ANCESTRAL SPECIES 25 ENSGT00940000176207 ENSGT00940000182393 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00990000203749 ENSGT00940000162428.g.a Haplochromini ANCESTRAL SPECIES 15 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00990000203749 ENSGT00940000162428.g.a Burton s mouthbrooder MODERN SPECIES 281 fxyd6 (ENSHBUG00000018555) ENSHBUG00000000553 DSCAML1 (ENSHBUG00000018732) ENSHBUG00000018764 ENSHBUG00000018770 ENSHBUG00000018775 gpr184 (ENSHBUG00000018782) PRKD2 (ENSHBUG00000018974) ##17 STRN4 (ENSHBUG00000019003) ##21 fkrp (ENSHBUG00000019015) slc1a5 (ENSHBUG00000019048) EGLN2 (ENSHBUG00000019071) tmem160 (ENSHBUG00000019078) NPAS1 (ENSHBUG00000019089) ENSHBUG00000019114 ##28 ap2s1 (ENSHBUG00000019141) ##22 rab4b (ENSHBUG00000019191) rhoub (ENSHBUG00000019211) ppm1na (ENSHBUG00000019216) rtn2a (ENSHBUG00000019300) PTGIR (ENSHBUG00000019321) ENSHBUG00000019364 Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00990000203749 ENSGT00940000162428.g.a P. nyererei MODERN SPECIES 298 fxyd6 (ENSPNYG00000018392) ENSPNYG00000018409 DSCAML1 (ENSPNYG00000018421) ENSPNYG00000018507 ENSPNYG00000018526 ENSPNYG00000018536 gpr184 (ENSPNYG00000018557) PRKD2 (ENSPNYG00000018590) ##17 STRN4 (ENSPNYG00000018681) ##21 fkrp (ENSPNYG00000018753) slc1a5 (ENSPNYG00000018765) ENSPNYG00000018789 tmem160 (ENSPNYG00000018807) NPAS1 (ENSPNYG00000018818) ENSPNYG00000018831 ##28 ap2s1 (ENSPNYG00000018856) ##22 rab4b (ENSPNYG00000018884) rhoub (ENSPNYG00000018907) rtn2a (ENSPNYG00000018916) ENSPNYG00000018934 ppm1na (ENSPNYG00000018942) PTGIR (ENSPNYG00000018955) ENSPNYG00000018960 nxph1 (ENSPNYG00000018970) ENSPNYG00000018981 thsd7aa (ENSPNYG00000019031) scin (ENSPNYG00000019143) arl4ab (ENSPNYG00000019193) ENSPNYG00000019224 eepd1 (ENSPNYG00000019255) gatad2b (ENSPNYG00000019289) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000017359 ENSGT00940000156484.a ENSGT00940000157454 ENSGT00940000153118 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00990000203749 ENSGT00940000162428.g.a Eastern happy MODERN SPECIES 5 fxyd6 (ENSACLG00000018290) ENSACLG00000018275 DSCAML1 (ENSACLG00000018094) ENSACLG00000018052 ENSACLG00000018041 ENSACLG00000018025 gpr184 (ENSACLG00000018018) PRKD2 (ENSACLG00000017889) ##17 STRN4 (ENSACLG00000017792) ##21 fkrp (ENSACLG00000017782) slc1a5 (ENSACLG00000017764) EGLN2 (ENSACLG00000017731) tmem160 (ENSACLG00000017722) NPAS1 (ENSACLG00000017707) ARHGAP35 (ENSACLG00000017654) ap2s1 (ENSACLG00000017617) ##22 rab4b (ENSACLG00000017589) rhoub (ENSACLG00000017582) ppm1na (ENSACLG00000017560) rtn2a (ENSACLG00000017475) PTGIR (ENSACLG00000017460) ENSACLG00000017450 ENSACLG00000017412 ENSACLG00000017402 mrpl28 (ENSACLG00000017376) ENSACLG00000017369 ppp1r37 (ENSACLG00000017303) ENSACLG00000017247 bmp16 (ENSACLG00000017170) gemin7 (ENSACLG00000017160) ENSACLG00000017145 Zebra mbuna MODERN SPECIES 1096 fxyd6 (ENSMZEG00005016211) ENSMZEG00005016217 DSCAML1 (ENSMZEG00005016225) ENSMZEG00005016235 ENSMZEG00005016239 ENSMZEG00005016247 gpr184 (ENSMZEG00005016255) PRKD2 (ENSMZEG00005016268) ##17 STRN4 (ENSMZEG00005016296) ##21 fkrp (ENSMZEG00005016301) slc1a5 (ENSMZEG00005016302) EGLN2 (ENSMZEG00005016309) tmem160 (ENSMZEG00005016316) NPAS1 (ENSMZEG00005016333) ARHGAP35 (ENSMZEG00005016358) ap2s1 (ENSMZEG00005016368) ##22 rab4b (ENSMZEG00005016373) rhoub (ENSMZEG00005016378) rtn2a (ENSMZEG00005016385) ENSMZEG00005016388 ppm1na (ENSMZEG00005016391) PTGIR (ENSMZEG00005016402) ENSMZEG00005016410 dpcd (ENSMZEG00005016422) ENSMZEG00005016437 ENSMZEG00005016444 ENSMZEG00005016451 ENSMZEG00005016457 gemin7 (ENSMZEG00005016459) bmp16 (ENSMZEG00005016468) ENSMZEG00005016479 Lyretail cichlid MODERN SPECIES 327 ENSNBRG00000006509 ENSNBRG00000006499 DSCAML1 (ENSNBRG00000006374) ENSNBRG00000006343 ENSNBRG00000006331 ENSNBRG00000006311 gpr184 (ENSNBRG00000006299) PRKD2 (ENSNBRG00000006238) ##17 STRN4 (ENSNBRG00000006138) ##21 fkrp (ENSNBRG00000006122) slc1a5 (ENSNBRG00000005904) EGLN2 (ENSNBRG00000005857) tmem160 (ENSNBRG00000005848) NPAS1 (ENSNBRG00000005778) ARHGAP35 (ENSNBRG00000005754) ap2s1 (ENSNBRG00000005730) ##22 rab4b (ENSNBRG00000005698) rhoub (ENSNBRG00000005685) rtn2a (ENSNBRG00000005652) ENSNBRG00000005646 ppm1na (ENSNBRG00000005618) ENSNBRG00000005603 PTGIR (ENSNBRG00000005586) ENSNBRG00000005576 mrpl28 (ENSNBRG00000005544) ppp1r37 (ENSNBRG00000005527) ENSNBRG00000005415 bmp16 (ENSNBRG00000005399) gemin7 (ENSNBRG00000005377) ENSNBRG00000005366 ENSNBRG00000005360 Nile tilapia MODERN SPECIES 5 fxyd6 (ENSONIG00000006047) ENSONIG00000035323 DSCAML1 (ENSONIG00000006033) ENSONIG00000038949 ENSONIG00000006031 ENSONIG00000031926 gpr184 (ENSONIG00000020470) PRKD2 (ENSONIG00000006021) ##17 STRN4 (ENSONIG00000006015) ##21 fkrp (ENSONIG00000020469) slc1a5 (ENSONIG00000006006) EGLN2 (ENSONIG00000006001) tmem160 (ENSONIG00000041394) NPAS1 (ENSONIG00000036145) ENSONIG00000005995 ##28 ap2s1 (ENSONIG00000030333) ##22 rab4b (ENSONIG00000005987) rhoub (ENSONIG00000033189) rtn2a (ENSONIG00000041725) ppm1na (ENSONIG00000005977) ENSONIG00000005976 PTGIR (ENSONIG00000005975) ENSONIG00000032840 ENSONIG00000035108 bmp16 (ENSONIG00000036110) ENSONIG00000005959 ppp1r37 (ENSONIG00000005960) ENSONIG00000030433 mrpl28 (ENSONIG00000005965) ENSONIG00000032366 ENSONIG00000030880 Midas cichlid MODERN SPECIES 1164 fxyd6 (ENSACIG00000000647) ENSACIG00000000640 ENSACIG00000000629 DSCAML1 (ENSACIG00000000553) ENSACIG00000000537 ENSACIG00000000522 gpr184 (ENSACIG00000000503) PRKD2 (ENSACIG00000000437) ##17 STRN4 (ENSACIG00000000332) ##21 fkrp (ENSACIG00000000309) slc1a5 (ENSACIG00000000293) ENSACIG00000000269 tmem160 (ENSACIG00000000180) NPAS1 (ENSACIG00000019758) ENSACIG00000019733 ##28 ap2s1 (ENSACIG00000019718) ##22 rab4b (ENSACIG00000019697) rhoub (ENSACIG00000019675) rtn2a (ENSACIG00000019660) ENSACIG00000019652 ppm1na (ENSACIG00000019638) ENSACIG00000019624 PTGIR (ENSACIG00000019614) calm3b (ENSACIG00000019598) Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Oryzias ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a.x ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.s ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Oryzias_b ANCESTRAL SPECIES 14 ENSGT00510000054245 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00980000202353 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a.x ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.s ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Indian medaka MODERN SPECIES 12 fxyd6 (ENSOMEG00000014490) ENSOMEG00000014469 DSCAML1 (ENSOMEG00000014421) ENSOMEG00000014301 ENSOMEG00000014275 si:dkey-202l22.3 (ENSOMEG00000014239) gpr184 (ENSOMEG00000014227) PRKD2 (ENSOMEG00000014217) ##17 STRN4 (ENSOMEG00000014165) ##21 fkrp (ENSOMEG00000014092) slc1a5 (ENSOMEG00000014071) EGLN2 (ENSOMEG00000014031) tmem160 (ENSOMEG00000014008) NPAS1 (ENSOMEG00000013988) ARHGAP35 (ENSOMEG00000013962) ap2s1 (ENSOMEG00000000353) ##22 rab4b (ENSOMEG00000013881) rhoub (ENSOMEG00000013845) rtn2a (ENSOMEG00000000735) ppm1na (ENSOMEG00000013743) ENSOMEG00000013732 PTGIR (ENSOMEG00000013711) calm3a (ENSOMEG00000013695) bmp16 (ENSOMEG00000013665) ENSOMEG00000013642 ppp1r37 (ENSOMEG00000013594) ENSOMEG00000013567 mrpl28 (ENSOMEG00000013553) ENSOMEG00000013536 clptm1 (ENSOMEG00000013516) tbcb (ENSOMEG00000013486) Javanese ricefish MODERN SPECIES 4 tmprss13b (ENSOJAG00000017600) fxyd6 (ENSOJAG00000017609) ENSOJAG00000017617 DSCAML1 (ENSOJAG00000017785) ENSOJAG00000019228 si:dkey-202l22.3 (ENSOJAG00000019242) gpr184 (ENSOJAG00000019253) PRKD2 (ENSOJAG00000001882) ##17 STRN4 (ENSOJAG00000002540) ##21 fkrp (ENSOJAG00000002572) slc1a5 (ENSOJAG00000002585) EGLN2 (ENSOJAG00000002604) tmem160 (ENSOJAG00000002613) NPAS1 (ENSOJAG00000002620) ARHGAP35 (ENSOJAG00000002635) ap2s1 (ENSOJAG00000002643) ##22 rab4b (ENSOJAG00000002672) rhoub (ENSOJAG00000002693) rtn2a (ENSOJAG00000002700) ppm1na (ENSOJAG00000002711) ENSOJAG00000002717 PTGIR (ENSOJAG00000002721) ENSOJAG00000002765 gemin7 (ENSOJAG00000002917) bmp16 (ENSOJAG00000002922) ENSOJAG00000002927 ppp1r37 (ENSOJAG00000002937) ENSOJAG00000002968 mrpl28 (ENSOJAG00000002974) ENSOJAG00000002987 clptm1 (ENSOJAG00000003041) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a.x ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295.s ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Japanese Medaka HdrR MODERN SPECIES 4 DSCAML1 (ENSORLG00000007177) ENSORLG00000028719 ENSORLG00000007148 ENSORLG00000007146 gpr184 (ENSORLG00000007136) PRKD2 (ENSORLG00000007121) ##17 STRN4 (ENSORLG00000007052) ##21 fkrp (ENSORLG00000007025) slc1a5 (ENSORLG00000007018) ENSORLG00000013757 ENSORLG00000006962 tmem160 (ENSORLG00000006946) NPAS1 (ENSORLG00000006935) ENSORLG00000006927 ##28 ENSORLG00000022767 ap2s1 (ENSORLG00000006912) ##22 rab4b (ENSORLG00000006902) rhoub (ENSORLG00000024468) rtn2a (ENSORLG00000027944) ppm1na (ENSORLG00000006866) ENSORLG00000006854 PTGIR (ENSORLG00000006848) ENSORLG00000006842 gemin7 (ENSORLG00000006826) bmp16 (ENSORLG00000028570) ENSORLG00000006822 ppp1r37 (ENSORLG00000006817) ENSORLG00000006812 mrpl28 (ENSORLG00000006806) ENSORLG00000006786 ENSORLG00000029281 Chinese medaka MODERN SPECIES 925 ENSOSIG00000004510 DSCAML1 (ENSOSIG00000004583) ENSOSIG00000006856 ENSOSIG00000006857 si:dkey-202l22.3 (ENSOSIG00000006858) gpr184 (ENSOSIG00000006859) PRKD2 (ENSOSIG00000006872) ##17 STRN4 (ENSOSIG00000007218) ##21 fkrp (ENSOSIG00000007613) slc1a5 (ENSOSIG00000007614) EGLN2 (ENSOSIG00000007615) tmem160 (ENSOSIG00000007617) NPAS1 (ENSOSIG00000007621) ENSOSIG00000007624 ENSOSIG00000007628 ##28 ap2s1 (ENSOSIG00000007633) ##22 rab4b (ENSOSIG00000007645) rhoub (ENSOSIG00000007721) rtn2a (ENSOSIG00000007725) ppm1na (ENSOSIG00000007732) ENSOSIG00000007736 ENSOSIG00000007740 PTGIR (ENSOSIG00000007743) calm3b (ENSOSIG00000007750) gemin7 (ENSOSIG00000007912) bmp16 (ENSOSIG00000007914) ENSOSIG00000007915 ppp1r37 (ENSOSIG00000007921) ENSOSIG00000007924 mrpl28 (ENSOSIG00000007927) ENSOSIG00000007928 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT00980000202353 ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 ENSGT00940000166238.a Poecilia ANCESTRAL SPECIES 2 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000156119 ENSGT00940000166238.a NAME_6 ANCESTRAL SPECIES 75 ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900.b ENSGT00940000165900.a ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00740000115816.A ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Amazon molly MODERN SPECIES 283 cbl (ENSPFOG00000007742) mcamb (ENSPFOG00000007963) RNF26 (ENSPFOG00000020373) ENSPFOG00000020374 c1qtnf5 (ENSPFOG00000008179) si:dkey-202l22.3 (ENSPFOG00000008198) gpr184 (ENSPFOG00000020375) PRKD2 (ENSPFOG00000008260) ##17 STRN4 (ENSPFOG00000008538) ##21 fkrp (ENSPFOG00000020376) slc1a5 (ENSPFOG00000008751) ENSPFOG00000008899 tmem160 (ENSPFOG00000008919) NPAS1 (ENSPFOG00000008940) ENSPFOG00000008993 ##28 ap2s1 (ENSPFOG00000009059) ##22 rab4b (ENSPFOG00000009095) rhoub (ENSPFOG00000009162) rhoub (ENSPFOG00000009174) rtn2a (ENSPFOG00000009216) ppm1na (ENSPFOG00000009223) ENSPFOG00000024064 PTGIR (ENSPFOG00000009272) ENSPFOG00000009278 ENSPFOG00000024002 ENSPFOG00000022404 gemin7 (ENSPFOG00000009309) bmp16 (ENSPFOG00000009315) ppp1r37 (ENSPFOG00000009326) ENSPFOG00000009466 mrpl28 (ENSPFOG00000009485) Sailfin molly MODERN SPECIES 2138 ENSPLAG00000018448 ##28 ap2s1 (ENSPLAG00000018437) ##22 rab4b (ENSPLAG00000018410) Guppy MODERN SPECIES 443 tmprss13b (ENSPREG00000022725) fxyd6 (ENSPREG00000022735) DSCAML1 (ENSPREG00000022741) ENSPREG00000022754 ENSPREG00000022758 si:dkey-202l22.3 (ENSPREG00000022759) gpr184 (ENSPREG00000022765) PRKD2 (ENSPREG00000022776) ##17 STRN4 (ENSPREG00000022797) ##21 fkrp (ENSPREG00000022804) slc1a5 (ENSPREG00000022822) ENSPREG00000022839 tmem160 (ENSPREG00000022844) NPAS1 (ENSPREG00000022851) ENSPREG00000022858 ##28 ap2s1 (ENSPREG00000022869) ##22 rab4b (ENSPREG00000022875) rhoub (ENSPREG00000022882) ENSPREG00000022893 ppm1na (ENSPREG00000022913) ENSPREG00000022919 PTGIR (ENSPREG00000022925) calm3a (ENSPREG00000022928) gemin7 (ENSPREG00000022938) bmp16 (ENSPREG00000022947) ENSPREG00000022956 ppp1r37 (ENSPREG00000022961) mrpl28 (ENSPREG00000022968) ENSPREG00000000561 clptm1 (ENSPREG00000000569) tbcb (ENSPREG00000000640) Platyfish MODERN SPECIES 9 tmprss13b (ENSXMAG00000004024) fxyd6 (ENSXMAG00000004035) ENSXMAG00000024262 DSCAML1 (ENSXMAG00000004039) ENSXMAG00000025431 si:dkey-202l22.3 (ENSXMAG00000004081) gpr184 (ENSXMAG00000004087) PRKD2 (ENSXMAG00000004089) ##17 STRN4 (ENSXMAG00000004130) ##21 fkrp (ENSXMAG00000004177) slc1a5 (ENSXMAG00000004179) EGLN2 (ENSXMAG00000028470) tmem160 (ENSXMAG00000004210) NPAS1 (ENSXMAG00000028521) ENSXMAG00000004221 ##28 ap2s1 (ENSXMAG00000004235) ##22 rab4b (ENSXMAG00000004238) rhoub (ENSXMAG00000022375) rtn2a (ENSXMAG00000022638) ppm1na (ENSXMAG00000001773) ENSXMAG00000023012 PTGIR (ENSXMAG00000025943) calm3b (ENSXMAG00000004263) gemin7 (ENSXMAG00000019556) bmp16 (ENSXMAG00000026621) ENSXMAG00000019557 ppp1r37 (ENSXMAG00000020834) ENSXMAG00000026593 mrpl28 (ENSXMAG00000004293) ENSXMAG00000004297 clptm1 (ENSXMAG00000004298) NAME_4 ANCESTRAL SPECIES 82 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b Sheepshead minnow MODERN SPECIES 579 EGLN2 (ENSCVAG00000020270) tmem160 (ENSCVAG00000020290) NPAS1 (ENSCVAG00000020326) ENSCVAG00000020349 ##28 ap2s1 (ENSCVAG00000020380) ##22 rab4b (ENSCVAG00000020399) rhoub (ENSCVAG00000020417) rtn2a (ENSCVAG00000020443) ENSCVAG00000020452 ppm1na (ENSCVAG00000020455) PTGIR (ENSCVAG00000020463) calm3b (ENSCVAG00000020476) Mummichog DUPLICATION Mummichog MODERN SPECIES 2386 fxyd6 (ENSFHEG00000015963) DSCAML1 (ENSFHEG00000016073) ENSFHEG00000016107 ENSFHEG00000016117 ENSFHEG00000016133 gpr184 (ENSFHEG00000016143) PRKD2 (ENSFHEG00000016324) ##17 STRN4 (ENSFHEG00000016338) ##21 fkrp (ENSFHEG00000000409) slc1a5 (ENSFHEG00000016358) ENSFHEG00000016381 tmem160 (ENSFHEG00000016392) NPAS1 (ENSFHEG00000016408) ENSFHEG00000016427 ##28 AP2S1 (ENSFHEG00000016430) ##22 ap2s1 (ENSFHEG00000016451) ##22 rab4b (ENSFHEG00000016474) rhoub (ENSFHEG00000016479) rtn2a (ENSFHEG00000016486) ENSFHEG00000016493 ppm1na (ENSFHEG00000016510) ENSFHEG00000016515 PTGIR (ENSFHEG00000016518) ENSFHEG00000016529 Mummichog MODERN SPECIES 2386 tmprss13b (ENSFHEG00000015942) fxyd6 (ENSFHEG00000015963) DSCAML1 (ENSFHEG00000016073) ENSFHEG00000016107 ENSFHEG00000016117 ENSFHEG00000016133 gpr184 (ENSFHEG00000016143) PRKD2 (ENSFHEG00000016324) ##17 STRN4 (ENSFHEG00000016338) ##21 fkrp (ENSFHEG00000000409) slc1a5 (ENSFHEG00000016358) ENSFHEG00000016381 tmem160 (ENSFHEG00000016392) NPAS1 (ENSFHEG00000016408) ENSFHEG00000016427 ##28 AP2S1 (ENSFHEG00000016430) ##22 ap2s1 (ENSFHEG00000016451) ##22 rab4b (ENSFHEG00000016474) rhoub (ENSFHEG00000016479) rtn2a (ENSFHEG00000016486) ENSFHEG00000016493 ppm1na (ENSFHEG00000016510) ENSFHEG00000016515 PTGIR (ENSFHEG00000016518) ENSFHEG00000016529 Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00980000202353 ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Mangrove rivulus MODERN SPECIES 117 fxyd6 (ENSKMAG00000008945) ENSKMAG00000008933 DSCAML1 (ENSKMAG00000008775) ENSKMAG00000008745 ENSKMAG00000008731 si:dkey-202l22.3 (ENSKMAG00000008715) gpr184 (ENSKMAG00000008707) PRKD2 (ENSKMAG00000008614) ##17 STRN4 (ENSKMAG00000008543) ##21 fkrp (ENSKMAG00000008523) slc1a5 (ENSKMAG00000008472) EGLN2 (ENSKMAG00000008443) tmem160 (ENSKMAG00000008426) NPAS1 (ENSKMAG00000008374) ENSKMAG00000008321 ##28 ap2s1 (ENSKMAG00000008281) ##22 rab4b (ENSKMAG00000008249) Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015014274 ENSNFUG00015014269 ENSNFUG00015014260 DSCAML1 (ENSNFUG00015013942) ENSNFUG00015013890 ENSNFUG00015013883 GPR132 (ENSNFUG00015013881) PRKD2 (ENSNFUG00015012719) ##17 STRN4 (ENSNFUG00015010940) ##21 FKRP (ENSNFUG00015010839) SLC1A5 (ENSNFUG00015010810) EGLN2 (ENSNFUG00015010796) TMEM160 (ENSNFUG00015010791) NPAS1 (ENSNFUG00015010764) ARHGAP35 (ENSNFUG00015010752) ##28 AP2S1 (ENSNFUG00015010718) ##22 rab4b (ENSNFUG00015010688) RHOUB (ENSNFUG00015010667) RTN2A (ENSNFUG00015010661) PPM1NA (ENSNFUG00015010383) PTGIR (ENSNFUG00015010329) Nfu_g_1_007837 (ENSNFUG00015010167) GEMIN7 (ENSNFUG00015010141) ENSNFUG00015010136 Nfu_g_1_000575 (ENSNFUG00015010130) ENSNFUG00015010123 ENSNFUG00015010100 PPP1R37 (ENSNFUG00015010055) mrpl28 (ENSNFUG00015010032) ENSNFUG00015009970 clptm1 (ENSNFUG00015009826) Turquoise killifish MODERN SPECIES 1611 OLA.17191 (ENSNFUG00015016623) ENSNFUG00015018296 MAT2A (ENSNFUG00015018305) ENSNFUG00015018339 ENSNFUG00015018343 SLC35E4 (ENSNFUG00015018345) ENSNFUG00015018349 ENSNFUG00015018371 ENSNFUG00015018376 ENSNFUG00015018378 ENSNFUG00015018386 ENSNFUG00015018458 APLNRB (ENSNFUG00015018469) ENSNFUG00015018472 TBC1D10A (ENSNFUG00015018476) AP2S1 (ENSNFUG00015018486) ##22 PPTC7B (ENSNFUG00015018489) prnpb (ENSNFUG00015018493) kcnip3b (ENSNFUG00015018494) trim69 (ENSNFUG00015018500) BMP1B (ENSNFUG00015018521) ENSNFUG00015019022 ANTXR1 (ENSNFUG00015019041) AAK1 (ENSNFUG00015019447) ENSNFUG00015019459 anxa4 (ENSNFUG00015019467) PRLHR2B (ENSNFUG00015019564) BRF2 (ENSNFUG00015019569) ENSNFUG00015019575 gpat4 (ENSNFUG00015019619) CABP1A (ENSNFUG00015020379) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164214.l ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Seriola ANCESTRAL SPECIES 62 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00970000195560 ENSGT00940000156484.a ENSGT00390000017359 Yellowtail amberjack MODERN SPECIES 2765 ENSSLDG00000021918 DSCAML1 (ENSSLDG00000021929) ENSSLDG00000021976 ENSSLDG00000021983 ENSSLDG00000021987 si:dkey-202l22.3 (ENSSLDG00000021994) gpr184 (ENSSLDG00000022007) PRKD2 (ENSSLDG00000022017) ##17 STRN4 (ENSSLDG00000022100) ##21 fkrp (ENSSLDG00000022150) slc1a5 (ENSSLDG00000022155) ENSSLDG00000022164 tmem160 (ENSSLDG00000022177) NPAS1 (ENSSLDG00000022197) ARHGAP35 (ENSSLDG00000022208) ap2s1 (ENSSLDG00000022219) ##22 rab4b (ENSSLDG00000022231) rhoub (ENSSLDG00000022253) rtn2a (ENSSLDG00000022267) ppm1na (ENSSLDG00000022294) ENSSLDG00000022309 PTGIR (ENSSLDG00000022322) calm3a (ENSSLDG00000000103) ENSSLDG00000000157 gemin7 (ENSSLDG00000000173) bmp16 (ENSSLDG00000000217) ENSSLDG00000000257 ENSSLDG00000000394 ENSSLDG00000000398 mrpl28 (ENSSLDG00000000409) Greater amberjack MODERN SPECIES 256 si:dkey-202l22.3 (ENSSDUG00000005151) gpr184 (ENSSDUG00000005178) PRKD2 (ENSSDUG00000005199) ##17 STRN4 (ENSSDUG00000005308) ##21 fkrp (ENSSDUG00000005327) slc1a5 (ENSSDUG00000005338) ENSSDUG00000005372 tmem160 (ENSSDUG00000005406) NPAS1 (ENSSDUG00000005432) ARHGAP35 (ENSSDUG00000005456) ap2s1 (ENSSDUG00000005475) ##22 rab4b (ENSSDUG00000005481) rhoub (ENSSDUG00000005508) rtn2a (ENSSDUG00000005515) ppm1na (ENSSDUG00000005546) ENSSDUG00000005617 PTGIR (ENSSDUG00000005631) calm3a (ENSSDUG00000005643) ENSSDUG00000005665 gemin7 (ENSSDUG00000005677) bmp16 (ENSSDUG00000005681) ENSSDUG00000005700 ppp1r37 (ENSSDUG00000005737) ENSSDUG00000005754 mrpl28 (ENSSDUG00000005764) Barramundi perch MODERN SPECIES 316 ENSLCAG00010018729 ENSLCAG00010018731 ENSLCAG00010018735 gpr184 (ENSLCAG00010018742) PRKD2 (ENSLCAG00010018759) ##17 STRN4 (ENSLCAG00010018847) ##21 fkrp (ENSLCAG00010018855) slc1a5 (ENSLCAG00010018862) ENSLCAG00010018876 tmem160 (ENSLCAG00010018884) NPAS1 (ENSLCAG00010018893) ARHGAP35 (ENSLCAG00010018908) ap2s1 (ENSLCAG00010018929) ##22 rab4b (ENSLCAG00010018968) rhoub (ENSLCAG00010019007) ENSLCAG00010019017 ppm1na (ENSLCAG00010019028) ENSLCAG00010019034 PTGIR (ENSLCAG00010019043) calm3a (ENSLCAG00010019063) ENSLCAG00010019159 gemin7 (ENSLCAG00010019160) bmp16 (ENSLCAG00010019164) ENSLCAG00010019168 ppp1r37 (ENSLCAG00010019178) ENSLCAG00010019207 mrpl28 (ENSLCAG00010019213) Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000159197 ENSGT01030000234872 ENSGT00940000176207 ENSGT00940000155354.a ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Turbot MODERN SPECIES 15 ENSSMAG00000029322 ENSSMAG00000014796 ENSSMAG00000014784 ENSSMAG00000014562 ENSSMAG00000014511 ENSSMAG00000014495 gpr184 (ENSSMAG00000014491) PRKD2 (ENSSMAG00000014413) ##17 STRN4 (ENSSMAG00000014394) ##21 fkrp (ENSSMAG00000014389) slc1a5 (ENSSMAG00000014367) ENSSMAG00000014356 tmem160 (ENSSMAG00000014348) NPAS1 (ENSSMAG00000014307) ARHGAP35 (ENSSMAG00000014276) ap2s1 (ENSSMAG00000014249) ##22 rab4b (ENSSMAG00000014221) rhoub (ENSSMAG00000035260) ppm1na (ENSSMAG00000014095) ENSSMAG00000014108 ENSSMAG00000023018 ENSSMAG00000014044 calm3a (ENSSMAG00000034840) ENSSMAG00000032057 gemin7 (ENSSMAG00000014017) bmp16 (ENSSMAG00000014001) ENSSMAG00000013968 ppp1r37 (ENSSMAG00000013943) ENSSMAG00000013935 mrpl28 (ENSSMAG00000013912) ENSSMAG00000013895 Tongue sole MODERN SPECIES 14 p2ry12 (ENSCSEG00000008584) ENSCSEG00000008571 ENSCSEG00000008561 ENSCSEG00000008553 MFSD1 (ENSCSEG00000008489) schip1 (ENSCSEG00000008410) PRKD2 (ENSCSEG00000008371) ##17 STRN4 (ENSCSEG00000008326) ##21 fkrp (ENSCSEG00000008321) slc1a5 (ENSCSEG00000008312) ENSCSEG00000008308 tmem160 (ENSCSEG00000008300) NPAS1 (ENSCSEG00000008295) ENSCSEG00000008286 ARHGAP35 (ENSCSEG00000008279) ap2s1 (ENSCSEG00000008268) ##22 rab4b (ENSCSEG00000008253) rhoub (ENSCSEG00000008236) rtn2a (ENSCSEG00000008206) ppm1na (ENSCSEG00000008195) ENSCSEG00000008188 PTGIR (ENSCSEG00000008173) calm3a (ENSCSEG00000008164) ENSCSEG00000008160 gemin7 (ENSCSEG00000008152) bmp16 (ENSCSEG00000008137) ENSCSEG00000008130 ppp1r37 (ENSCSEG00000008118) ENSCSEG00000008107 mrpl28 (ENSCSEG00000008095) ENSCSEG00000008061 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Anabantoidei ANCESTRAL SPECIES 14 ENSGT01030000234872 ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Climbing perch MODERN SPECIES 4 ENSATEG00000012161 ENSATEG00000012179 ENSATEG00000012199 ENSATEG00000012345 ENSATEG00000012353 si:dkey-202l22.3 (ENSATEG00000012365) gpr184 (ENSATEG00000012382) PRKD2 (ENSATEG00000012391) ##17 STRN4 (ENSATEG00000012485) ##21 fkrp (ENSATEG00000012629) slc1a5 (ENSATEG00000012644) ENSATEG00000012670 tmem160 (ENSATEG00000012679) NPAS1 (ENSATEG00000012695) ARHGAP35 (ENSATEG00000012799) ap2s1 (ENSATEG00000012831) ##22 rab4b (ENSATEG00000012855) rhoub (ENSATEG00000026799) rtn2a (ENSATEG00000026895) ppm1na (ENSATEG00000012925) ENSATEG00000012941 ENSATEG00000012953 ENSATEG00000012960 gemin7 (ENSATEG00000012989) bmp16 (ENSATEG00000013021) ENSATEG00000013043 ppp1r37 (ENSATEG00000013054) ENSATEG00000013073 mrpl28 (ENSATEG00000013085) ENSATEG00000013107 clptm1 (ENSATEG00000013128) Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000012331 ENSBSLG00000012325 DSCAML1 (ENSBSLG00000010302) ENSBSLG00000010264 ENSBSLG00000010258 ENSBSLG00000010246 gpr184 (ENSBSLG00000010243) PRKD2 (ENSBSLG00000008049) ##17 STRN4 (ENSBSLG00000007435) ##21 fkrp (ENSBSLG00000007406) slc1a5 (ENSBSLG00000007391) ENSBSLG00000007382 tmem160 (ENSBSLG00000007376) NPAS1 (ENSBSLG00000007346) ARHGAP35 (ENSBSLG00000007336) ap2s1 (ENSBSLG00000007305) ##22 rab4b (ENSBSLG00000007254) gemin7 (ENSBSLG00000007242) rhoub (ENSBSLG00000007238) rtn2a (ENSBSLG00000007224) ppm1na (ENSBSLG00000007209) ENSBSLG00000007206 PTGIR (ENSBSLG00000007204) ENSBSLG00000007117 gemin7 (ENSBSLG00000007092) bmp16 (ENSBSLG00000007088) ENSBSLG00000007081 ppp1r37 (ENSBSLG00000006589) ENSBSLG00000005898 mrpl28 (ENSBSLG00000005893) clptm1 (ENSBSLG00000005653) Zig-zag eel MODERN SPECIES 4 TMPRSS13 (ENSMAMG00000010564) fxyd6 (ENSMAMG00000010577) ENSMAMG00000010594 DSCAML1 (ENSMAMG00000010600) ENSMAMG00000010669 gpr184 (ENSMAMG00000010677) ENSMAMG00000010687 PRKD2 (ENSMAMG00000010697) ##17 STRN4 (ENSMAMG00000010765) ##21 fkrp (ENSMAMG00000010770) slc1a5 (ENSMAMG00000010781) ENSMAMG00000010817 tmem160 (ENSMAMG00000010840) ENSMAMG00000010860 ENSMAMG00000010943 ##28 ap2s1 (ENSMAMG00000027708) ##22 rab4b (ENSMAMG00000011009) rhoub (ENSMAMG00000011031) rtn2a (ENSMAMG00000011037) ppm1na (ENSMAMG00000011076) ENSMAMG00000025723 ENSMAMG00000011109 ENSMAMG00000011128 ENSMAMG00000011135 gemin7 (ENSMAMG00000011153) bmp16 (ENSMAMG00000011163) ENSMAMG00000011197 ppp1r37 (ENSMAMG00000011469) ENSMAMG00000011482 mrpl28 (ENSMAMG00000011487) ENSMAMG00000011497 Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Tetraodon MODERN SPECIES 8 DSCAML1 (ENSTNIG00000007768) ENSTNIG00000007767 ENSTNIG00000007766 si:dkey-202l22.3 (ENSTNIG00000007765) gpr184 (ENSTNIG00000007764) PRKD2 (ENSTNIG00000007763) ##17 STRN4 (ENSTNIG00000007762) ##21 fkrp (ENSTNIG00000007761) slc1a5 (ENSTNIG00000007760) slc1a5 (ENSTNIG00000007759) slc1a5 (ENSTNIG00000000523) EGLN2 (ENSTNIG00000007758) tmem160 (ENSTNIG00000007757) NPAS1 (ENSTNIG00000007756) ENSTNIG00000007755 ##28 ap2s1 (ENSTNIG00000007754) ##22 rab4b (ENSTNIG00000007753) rhoub (ENSTNIG00000007752) rtn2a (ENSTNIG00000000564) ppm1na (ENSTNIG00000007751) PTGIR (ENSTNIG00000001391) calm3b (ENSTNIG00000007750) bmp16 (ENSTNIG00000007749) ENSTNIG00000007748 ppp1r37 (ENSTNIG00000007747) ENSTNIG00000000961 mrpl28 (ENSTNIG00000007746) RELB (ENSTNIG00000007745) clptm1 (ENSTNIG00000007744) tbcb (ENSTNIG00000007743) six5 (ENSTNIG00000007742) Fugu MODERN SPECIES 2 tmprss13b (ENSTRUG00000020477) fxyd6 (ENSTRUG00000013289) ENSTRUG00000023718 DSCAML1 (ENSTRUG00000013200) ENSTRUG00000024484 ENSTRUG00000031878 prlh2r (ENSTRUG00000013109) gpr184 (ENSTRUG00000013068) PRKD2 (ENSTRUG00000012916) ##17 fkrp (ENSTRUG00000012773) slc1a5 (ENSTRUG00000012427) ENSTRUG00000021179 tmem160 (ENSTRUG00000021260) NPAS1 (ENSTRUG00000012318) ENSTRUG00000012205 ##28 ap2s1 (ENSTRUG00000012134) ##22 rab4b (ENSTRUG00000012010) rhoub (ENSTRUG00000033432) rtn2 (ENSTRUG00000011895) ppm1na (ENSTRUG00000011812) ENSTRUG00000011761 PTGIR (ENSTRUG00000011708) calm3b (ENSTRUG00000021268) ENSTRUG00000028429 gemin7 (ENSTRUG00000011620) bmp16 (ENSTRUG00000011486) ENSTRUG00000011465 ppp1r37 (ENSTRUG00000019606) mrpl28 (ENSTRUG00000019877) ENSTRUG00000011348 clptm1 (ENSTRUG00000011269) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00940000154390.B ENSGT00940000164128.b ENSGT00940000162008 ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT00940000154553.a.a.c ##28 ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000177307 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 Pike perch MODERN SPECIES 133 il10ra (ENSSLUG00000015873) ENSSLUG00000015844 fxyd6 (ENSSLUG00000015832) ENSSLUG00000015824 DSCAML1 (ENSSLUG00000015728) si:dkey-202l22.3 (ENSSLUG00000015701) gpr184 (ENSSLUG00000015668) PRKD2 (ENSSLUG00000014886) ##17 STRN4 (ENSSLUG00000014785) ##21 fkrp (ENSSLUG00000014776) slc1a5 (ENSSLUG00000014770) ENSSLUG00000014761 tmem160 (ENSSLUG00000014758) NPAS1 (ENSSLUG00000011556) ENSSLUG00000011551 ##28 ap2s1 (ENSSLUG00000011496) ##22 rab4b (ENSSLUG00000011423) rhoub (ENSSLUG00000011408) rtn2a (ENSSLUG00000011403) ENSSLUG00000011400 ppm1na (ENSSLUG00000011397) ENSSLUG00000011393 PTGIR (ENSSLUG00000011390) calm3a (ENSSLUG00000011325) ENSSLUG00000011318 gemin7 (ENSSLUG00000011316) bmp16 (ENSSLUG00000011313) ENSSLUG00000011311 ppp1r37 (ENSSLUG00000011048) ENSSLUG00000011033 mrpl28 (ENSSLUG00000011031) Channel bull blenny MODERN SPECIES 4 fxyd6 (ENSCGOG00000007308) ENSCGOG00000007311 DSCAML1 (ENSCGOG00000007348) ENSCGOG00000008220 ENSCGOG00000008222 gpr184 (ENSCGOG00000008228) PRKD2 (ENSCGOG00000008254) ##17 STRN4 (ENSCGOG00000008537) ##21 fkrp (ENSCGOG00000008592) slc1a5 (ENSCGOG00000008594) EGLN2 (ENSCGOG00000008610) tmem160 (ENSCGOG00000008615) ENSCGOG00000008617 ENSCGOG00000008621 ENSCGOG00000008625 ##28 ap2s1 (ENSCGOG00000008629) ##22 rab4b (ENSCGOG00000008647) rhoub (ENSCGOG00000008699) rtn2a (ENSCGOG00000008701) ppm1na (ENSCGOG00000008707) ENSCGOG00000008778 PTGIR (ENSCGOG00000008783) calm3a (ENSCGOG00000008787) ENSCGOG00000008960 gemin7 (ENSCGOG00000008969) bmp16 (ENSCGOG00000008973) ENSCGOG00000008976 ppp1r37 (ENSCGOG00000009023) mrpl28 (ENSCGOG00000009242) ENSCGOG00000009248 clptm1 (ENSCGOG00000009254) Cottioidei ANCESTRAL SPECIES 4 ENSGT00510000054245 ENSGT00940000159197 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 Lumpfish MODERN SPECIES 4 mre11a (ENSCLMG00005010477) ENSCLMG00005011613 tmprss13b (ENSCLMG00005011616) ENSCLMG00005011617 DSCAML1 (ENSCLMG00005011621) prlh2r (ENSCLMG00005012013) gpr184 (ENSCLMG00005012014) PRKD2 (ENSCLMG00005012032) ##17 STRN4 (ENSCLMG00005015102) ##21 fkrp (ENSCLMG00005015224) slc1a5 (ENSCLMG00005015226) ENSCLMG00005015228 tmem160 (ENSCLMG00005015230) NPAS1 (ENSCLMG00005015233) ENSCLMG00005015236 ap2s1 (ENSCLMG00005015240) ##22 rab4b (ENSCLMG00005015242) rhoub (ENSCLMG00005015243) rtn2a (ENSCLMG00005015244) ppm1na (ENSCLMG00005015264) ENSCLMG00005015295 PTGIR (ENSCLMG00005015296) calm3a (ENSCLMG00005015297) ENSCLMG00005015346 gemin7 (ENSCLMG00005015347) bmp16 (ENSCLMG00005015348) ENSCLMG00005015349 ppp1r37 (ENSCLMG00005015351) mrpl28 (ENSCLMG00005015544) ENSCLMG00005015546 clptm1 (ENSCLMG00005015548) Stickleback MODERN SPECIES il10ra (ENSGACG00000009363) tmprss13b (ENSGACG00000009369) DSCAML1 (ENSGACG00000009383) ENSGACG00000009414 ENSGACG00000009417 ENSGACG00000009420 gpr184 (ENSGACG00000009424) PRKD2 (ENSGACG00000009426) ##17 STRN4 (ENSGACG00000009437) ##21 fkrp (ENSGACG00000009443) slc1a5 (ENSGACG00000009446) EGLN2 (ENSGACG00000009469) tmem160 (ENSGACG00000009491) NPAS1 (ENSGACG00000009494) ENSGACG00000009502 ##28 ap2s1 (ENSGACG00000009507) ##22 rab4b (ENSGACG00000009539) rhoub (ENSGACG00000009566) rtn2a (ENSGACG00000009589) ppm1na (ENSGACG00000009594) PTGIR (ENSGACG00000009600) ENSGACG00000009604 ENSGACG00000009610 gemin7 (ENSGACG00000009619) bmp16 (ENSGACG00000009621) ENSGACG00000009625 ppp1r37 (ENSGACG00000009629) ENSGACG00000009639 mrpl28 (ENSGACG00000009641) RELB (ENSGACG00000009656) clptm1 (ENSGACG00000009668) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 ENSGT00530000063461.B Gilthead seabream MODERN SPECIES 11 DSCAML1 (ENSSAUG00010014285) ENSSAUG00010014263 ENSSAUG00010014262 si:dkey-202l22.3 (ENSSAUG00010014261) gpr184 (ENSSAUG00010014259) PRKD2 (ENSSAUG00010014099) ##17 ENSSAUG00010014078 STRN4 (ENSSAUG00010014073) ##21 fkrp (ENSSAUG00010014067) slc1a5 (ENSSAUG00010014062) ENSSAUG00010014055 tmem160 (ENSSAUG00010014050) ENSSAUG00010014047 NPAS1 (ENSSAUG00010014044) ARHGAP35 (ENSSAUG00010014039) ap2s1 (ENSSAUG00010013923) ##22 rab4b (ENSSAUG00010013905) rhoub (ENSSAUG00010013901) rtn2a (ENSSAUG00010013899) ppm1na (ENSSAUG00010013895) ENSSAUG00010013893 PTGIR (ENSSAUG00010013890) calm3a (ENSSAUG00010013755) ENSSAUG00010013752 gemin7 (ENSSAUG00010013748) bmp16 (ENSSAUG00010013747) ENSSAUG00010013745 ppp1r37 (ENSSAUG00010013635) ENSSAUG00010013630 ENSSAUG00010013629 mrpl28 (ENSSAUG00010013627) Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000153062.B ENSGT00940000176207 ENSGT00940000155354.a ENSGT00390000009562 ENSGT00940000154390.B ENSGT00940000164128.b ENSGT01100000263537.b.b.c.b ENSGT00950000183024.a.b.b ##17 ENSGT00950000183095.a.b.a.b.a ##21 ENSGT00390000017583 ENSGT00940000159485 ENSGT00940000160655 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ##22 ENSGT00940000159399 ENSGT00940000165900 ENSGT00940000167260 ENSGT00940000164695.a ENSGT00940000167255 ENSGT01050000244902.b.d ENSGT00950000182980.a.b.b.a.b.b ENSGT00940000166868.b ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000153118 ENSGT00940000157454 ENSGT00940000156484.a ENSGT00390000017359 ENSGT00940000160230 European seabass MODERN SPECIES 3 ENSDLAG00005014590 ENSDLAG00005015988 ENSDLAG00005015995 ENSDLAG00005000082 ENSDLAG00005030816 gpr184 (ENSDLAG00005000092) PRKD2 (ENSDLAG00005027454) ##17 PRKD2 (ENSDLAG00005029851) ##17 STRN4 (ENSDLAG00005000469) ##21 fkrp (ENSDLAG00005000689) slc1a5 (ENSDLAG00005030735) tmem160 (ENSDLAG00005035128) ENSDLAG00005000698 ENSDLAG00005027965 ARHGAP35 (ENSDLAG00005000707) ap2s1 (ENSDLAG00005030226) ##22 rab4b (ENSDLAG00005000714) rhoub (ENSDLAG00005000718) rtn2a (ENSDLAG00005000721) ppm1na (ENSDLAG00005027240) ENSDLAG00005000727 ENSDLAG00005000729 calm3a (ENSDLAG00005000735) ENSDLAG00005000747 gemin7 (ENSDLAG00005000753) bmp16 (ENSDLAG00005000755) ENSDLAG00005000758 ppp1r37 (ENSDLAG00005000772) ENSDLAG00005000818 mrpl28 (ENSDLAG00005000825) ENSDLAG00005000830 Large yellow croaker MODERN SPECIES 479 ENSLCRG00005013023 DSCAML1 (ENSLCRG00005013028) ENSLCRG00005013063 ENSLCRG00005013065 si:dkey-202l22.3 (ENSLCRG00005013067) gpr184 (ENSLCRG00005013068) PRKD2 (ENSLCRG00005013088) ##17 STRN4 (ENSLCRG00005014761) ##21 fkrp (ENSLCRG00005014997) slc1a5 (ENSLCRG00005014999) ENSLCRG00005015002 tmem160 (ENSLCRG00005015005) ENSLCRG00005002346 NPAS1 (ENSLCRG00005002351) ARHGAP35 (ENSLCRG00005002362) ap2s1 (ENSLCRG00005002386) ##22 rab4b (ENSLCRG00005002663) rhoub (ENSLCRG00005002675) rtn2a (ENSLCRG00005002680) ppm1na (ENSLCRG00005002684) ENSLCRG00005002688 ENSLCRG00005002691 PTGIR (ENSLCRG00005002699) calm3a (ENSLCRG00005002706) ENSLCRG00005002799 gemin7 (ENSLCRG00005002804) bmp16 (ENSLCRG00005002805) ENSLCRG00005002809 ppp1r37 (ENSLCRG00005002828) ENSLCRG00005002964 mrpl28 (ENSLCRG00005002966) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 129 ENSLBEG00000025913 DSCAML1 (ENSLBEG00000025935) ENSLBEG00000025997 ENSLBEG00000026013 ENSLBEG00000026025 gpr184 (ENSLBEG00000026042) PRKD2 (ENSLBEG00000026077) ##17 STRN4 (ENSLBEG00000026139) ##21 fkrp (ENSLBEG00000026163) slc1a5 (ENSLBEG00000026170) ENSLBEG00000026189 tmem160 (ENSLBEG00000026209) ENSLBEG00000026218 ENSLBEG00000026235 ENSLBEG00000026246 ##28 ap2s1 (ENSLBEG00000026271) ##22 rab4b (ENSLBEG00000026300) kmt2a (ENSLBEG00000026335) UBE4A (ENSLBEG00000026381) ENSLBEG00000026437 im:7138535 (ENSLBEG00000026478) chchd2 (ENSLBEG00000026497) phkg1a (ENSLBEG00000026509) psph (ENSLBEG00000026587) NIPSNAP2 (ENSLBEG00000026570) limk1a (ENSLBEG00000026633) ENSLBEG00000026675 MNT (ENSLBEG00000026696) mettl16 (ENSLBEG00000026712) pafah1b1a (ENSLBEG00000026733) cluha (ENSLBEG00000026785) Ballan wrasse MODERN SPECIES 4475 AP2S1 (ENSLBEG00000028882) ##22 Ecdysozoa ANCESTRAL SPECIES ENSGT00970000193421.A ##22 Fruitfly MODERN SPECIES 19 pre-mod(mdg4)-I (FBgn0266177) pre-mod(mdg4)-J (FBgn0266176) pre-mod(mdg4)-P (FBgn0266175) pre-mod(mdg4)-L (FBgn0266174) pre-mod(mdg4)-K (FBgn0266173) pre-mod(mdg4)-H (FBgn0267649) pre-mod(mdg4)-G (FBgn0267648) pre-mod(mdg4)-B (FBgn0266178) mod(mdg4) (FBgn0002781) aus (FBgn0038881) CG17298 (FBgn0038879) SIFaR (FBgn0038880) CG3301 (FBgn0038878) CG3308 (FBgn0038877) Idi (FBgn0038876) AP-2sigma (FBgn0043012) ##22 Rab1 (FBgn0285937) ETHR (FBgn0038874) CG5892 (FBgn0038873) e (FBgn0000527) Nelf-A (FBgn0038872) CG3337 (FBgn0038871) Oga (FBgn0038870) Smyd5 (FBgn0038869) CG5862 (FBgn0038868) Snmp1 (FBgn0260004) CG5810 (FBgn0038866) cDIP (FBgn0038865) SNF4Agamma (FBgn0264357) meigo (FBgn0250820) Usp8 (FBgn0038862) Caenorhabditis elegans MODERN SPECIES 6 R160.4 (WBGene00020121) R160.5 (WBGene00020122) R160.13 (WBGene00304819) R160.14 (WBGene00304818) R160.6 (WBGene00020123) R160.2 (WBGene00020119) R160.12 (WBGene00304817) lst-2 (WBGene00003084) dpy-23 (WBGene00001082) D1079.1 (WBGene00017040) dop-1 (WBGene00001052) cest-26 (WBGene00017478) F15A8.1 (WBGene00017476) mltn-13 (WBGene00017794) F02E8.4 (WBGene00017177) aps-2 (WBGene00000157) ##22 atg-16.1 (WBGene00017178) nmur-3 (WBGene00017176) asb-2 (WBGene00000207) ncr-1 (WBGene00003561) F46H6.5 (WBGene00023460) dgk-2 (WBGene00000959) rhi-1 (WBGene00004356) spr-3 (WBGene00005008) C07A12.7 (WBGene00015561) pdi-2 (WBGene00003963) nhr-35 (WBGene00003628) C07A12.2 (WBGene00015560) C07A12.18 (WBGene00206364) ham-2 (WBGene00001821) C05E11.6 (WBGene00015495) Yeast MODERN SPECIES 10 OPI3 (YJR073C) NPA3 (YJR072C) YJR071W LIA1 (YJR070C) HAM1 (YJR069C) RFC2 (YJR068W) YAE1 (YJR067C) TOR1 (YJR066W) ARP3 (YJR065C) CCT5 (YJR064W) RPA12 (YJR063W) NTA1 (YJR062C) YJR061W CBF1 (YJR060W) PTK2 (YJR059W) APS2 (YJR058C) ##22 CDC8 (YJR057W) YJR056C HIT1 (YJR055W) KCH1 (YJR054W) BFA1 (YJR053W) RAD7 (YJR052W) OSM1 (YJR051W) ISY1 (YJR050W) UTR1 (YJR049C) CYC1 (YJR048W) ANB1 (YJR047C) TAH11 (YJR046W) SSC1 (YJR045C) VPS55 (YJR044C) POL32 (YJR043C) Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00970000193421.C ##22 Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00970000193421.C.a ##22 Chordata ANCESTRAL SPECIES ENSGT00970000193421.C.a ##22 Vertebrata ANCESTRAL SPECIES ENSGT00970000193421.C.a ##22 Gnathostomata ANCESTRAL SPECIES 64 ENSGT00940000159243 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000167760 ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 Euteleostomi ANCESTRAL SPECIES 1 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00390000001280.b Sarcopterygii ANCESTRAL SPECIES 1 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00390000001280.b Coelacanth MODERN SPECIES 337 ENSLACG00000002302 TRIM36 (ENSLACG00000008940) CCDC112 (ENSLACG00000011100) FEM1C (ENSLACG00000012600) ENSLACG00000012818 TMED7 (ENSLACG00000013375) ENSLACG00000013544 ENSLACG00000013982 CDO1 (ENSLACG00000014020) AP3S1 (ENSLACG00000014684) ##22 LVRN (ENSLACG00000015506) ARL14EPL (ENSLACG00000016058) COMMD10 (ENSLACG00000016104) SEMA6A (ENSLACG00000016635) ENSLACG00000017571 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00940000164652 ENSGT00530000064208.b ENSGT00390000001485 Anura ANCESTRAL SPECIES ENSGT00970000193421.C.a ##22 Frog MODERN SPECIES apc (ENSXETG00000021501) srp19 (ENSXETG00000011993) reep5 (ENSXETG00000021513) dcp2 (ENSXETG00000021514) mcc (ENSXETG00000021515) ythdc2 (ENSXETG00000021517) ENSXETG00000044551 kcnn2 (ENSXETG00000021518) ENSXETG00000047114 trim36 (ENSXETG00000011294) pggt1b (ENSXETG00000011296) fem1c (ENSXETG00000040895) tmed7 (ENSXETG00000018742) cdo1 (ENSXETG00000018739) ENSXETG00000046788 ap3s1 (ENSXETG00000027374) ##22 ENSXETG00000044300 lvrn (ENSXETG00000018734) ARL14EPL (ENSXETG00000039184) commd10 (ENSXETG00000018731) sema6a (ENSXETG00000018720) ENSXETG00000043122 dtwd2 (ENSXETG00000017583) dmxl1 (ENSXETG00000017568) tnfaip8 (ENSXETG00000017562) hsd17b4 (ENSXETG00000017534) ENSXETG00000047428 prr16 (ENSXETG00000040006) ENSXETG00000036407 srfbp1 (ENSXETG00000004681) lox (ENSXETG00000004679) Amniota ANCESTRAL SPECIES 4 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 Mammalia ANCESTRAL SPECIES 5 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Theria ANCESTRAL SPECIES 11 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Eutheria ANCESTRAL SPECIES 6 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 Eulipotyphla ANCESTRAL SPECIES ENSGT00970000193421.C.a ##22 Common shrew MODERN SPECIES 5620 ENSSARG00000008861 ##22 Hedgehog MODERN SPECIES 7165 AP3S1 (ENSEEUG00000013979) ##22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Carnivora ANCESTRAL SPECIES 8 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Caniformia ANCESTRAL SPECIES 5 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Canidae ANCESTRAL SPECIES 9 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000155120.mb ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT01020000230401.a.a.a.i.a.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000167085 ENSGT00940000163120 ENSGT00390000006478 Red fox MODERN SPECIES 111 ENSVVUG00000000418 TMED9 (ENSVVUG00000000349) YTHDC2 (ENSVVUG00000000281) KCNN2 (ENSVVUG00000000233) ENSVVUG00000000110 TRIM36 (ENSVVUG00000000084) PGGT1B (ENSVVUG00000000052) CCDC112 (ENSVVUG00000019638) ENSVVUG00000019634 FEM1C (ENSVVUG00000019633) ENSVVUG00000019628 TMED7 (ENSVVUG00000019625) CDO1 (ENSVVUG00000019615) ATG12 (ENSVVUG00000019613) ENSVVUG00000019611 AP3S1 (ENSVVUG00000019605) ##22 LVRN (ENSVVUG00000019479) ARL14EPL (ENSVVUG00000019464) COMMD10 (ENSVVUG00000019460) SEMA6A (ENSVVUG00000019437) ENSVVUG00000019417 ENSVVUG00000019403 DTWD2 (ENSVVUG00000019378) DMXL1 (ENSVVUG00000019328) TNFAIP8 (ENSVVUG00000019318) HSD17B4 (ENSVVUG00000019308) FAM170A (ENSVVUG00000019296) Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000155120.mb ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT01020000230401.a.a.a.i.a.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000167085 ENSGT00940000163120.b ENSGT00390000006478 Dingo MODERN SPECIES 238 TMED9 (ENSCAFG00020003663) ENSCAFG00020003665 YTHDC2 (ENSCAFG00020003668) KCNN2 (ENSCAFG00020003886) TRIM36 (ENSCAFG00020003966) PGGT1B (ENSCAFG00020003990) CCDC112 (ENSCAFG00020003999) ENSCAFG00020004008 ENSCAFG00020004013 FEM1C (ENSCAFG00020004021) ENSCAFG00020004023 TMED7 (ENSCAFG00020004025) ENSCAFG00020004028 CDO1 (ENSCAFG00020004035) ATG12 (ENSCAFG00020004037) AP3S1 (ENSCAFG00020004039) ##22 ENSCAFG00020004047 LVRN (ENSCAFG00020004057) ARL14EPL (ENSCAFG00020004094) COMMD10 (ENSCAFG00020004104) ENSCAFG00020004122 ENSCAFG00020004131 ENSCAFG00020004183 ENSCAFG00020004192 DTWD2 (ENSCAFG00020004203) DMXL1 (ENSCAFG00020004223) TNFAIP8 (ENSCAFG00020004646) HSD17B4 (ENSCAFG00020004649) ENSCAFG00020004661 Dog MODERN SPECIES 2 ENSCAFG00845010459 KCNN2 (ENSCAFG00845010795) TRIM36 (ENSCAFG00845010936) ENSCAFG00845011189 PGGT1B (ENSCAFG00845011236) CCDC112 (ENSCAFG00845011347) ENSCAFG00845011455 ENSCAFG00845011485 FEM1C (ENSCAFG00845011535) ENSCAFG00845005298 TICAM2 (ENSCAFG00845005311) TMED7 (ENSCAFG00845005331) CDO1 (ENSCAFG00845005340) ENSCAFG00845005354 ATG12 (ENSCAFG00845005357) AP3S1 (ENSCAFG00845005379) ##22 ENSCAFG00845005391 LVRN (ENSCAFG00845005410) ARL14EPL (ENSCAFG00845005437) COMMD10 (ENSCAFG00845005464) SEMA6A (ENSCAFG00845005513) ENSCAFG00845005748 ENSCAFG00845005791 DTWD2 (ENSCAFG00845005903) DMXL1 (ENSCAFG00845006156) TNFAIP8 (ENSCAFG00845006569) HSD17B4 (ENSCAFG00845006702) ENSCAFG00845006896 ENSCAFG00845006930 ENSCAFG00845007037 ENSCAFG00845007068 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Mustelinae ANCESTRAL SPECIES 92 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a American mink MODERN SPECIES 273 FEM1C (ENSNVIG00000015079) TICAM2 (ENSNVIG00000015067) TMED7 (ENSNVIG00000015056) CDO1 (ENSNVIG00000015029) ATG12 (ENSNVIG00000015011) AP3S1 (ENSNVIG00000014991) ##22 LVRN (ENSNVIG00000014878) ARL14EPL (ENSNVIG00000014839) COMMD10 (ENSNVIG00000014803) SEMA6A (ENSNVIG00000014678) Ferret DUPLICATION Ferret MODERN SPECIES 175 IPO11 (ENSMPUG00000007026) DIMT1 (ENSMPUG00000007145) ENSMPUG00000007162 ZSWIM6 (ENSMPUG00000007188) SMIM15 (ENSMPUG00000020042) ERCC8 (ENSMPUG00000007355) ELOVL7 (ENSMPUG00000007367) DEPDC1B (ENSMPUG00000007378) ENSMPUG00000007388 ENSMPUG00000007391 PDE4D (ENSMPUG00000007399) RAB3C (ENSMPUG00000007411) PLK2 (ENSMPUG00000007421) ENSMPUG00000007431 GPBP1 (ENSMPUG00000007439) ENSMPUG00000007449 ##22 MIER3 (ENSMPUG00000007453) SETD9 (ENSMPUG00000007469) MAP3K1 (ENSMPUG00000007493) ANKRD55 (ENSMPUG00000007513) ENSMPUG00000007526 IL6ST (ENSMPUG00000007532) IL31RA (ENSMPUG00000007550) DDX4 (ENSMPUG00000007596) SLC38A9 (ENSMPUG00000007611) MTREX (ENSMPUG00000007619) DHX29 (ENSMPUG00000007636) CCNO (ENSMPUG00000007657) MCIDAS (ENSMPUG00000007663) GPX8 (ENSMPUG00000007679) ENSMPUG00000007686 Ferret MODERN SPECIES 230 RMND5B (ENSMPUG00000000746) NHP2 (ENSMPUG00000000747) N4BP3 (ENSMPUG00000000751) B4GALT7 (ENSMPUG00000000752) TMED9 (ENSMPUG00000000753) ENSMPUG00000000754 YTHDC2 (ENSMPUG00000000755) KCNN2 (ENSMPUG00000000758) TRIM36 (ENSMPUG00000000761) PGGT1B (ENSMPUG00000000763) ENSMPUG00000000765 FEM1C (ENSMPUG00000000766) TMED7 (ENSMPUG00000000768) CDO1 (ENSMPUG00000000771) ATG12 (ENSMPUG00000000773) AP3S1 (ENSMPUG00000000782) ##22 LVRN (ENSMPUG00000000793) ENSMPUG00000018462 ARL14EPL (ENSMPUG00000000795) COMMD10 (ENSMPUG00000000799) SEMA6A (ENSMPUG00000000806) ENSMPUG00000018463 ENSMPUG00000000814 DTWD2 (ENSMPUG00000000815) ENSMPUG00000000821 ENSMPUG00000000824 ENSMPUG00000000826 ENSMPUG00000000828 ENSMPUG00000000831 TNFAIP8 (ENSMPUG00000000832) ENSMPUG00000000834 Ursidae ANCESTRAL SPECIES 16 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747.mb ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000155120 ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Ursus ANCESTRAL SPECIES 111 ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747.mb ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000155120.ib ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 Polar bear MODERN SPECIES 336 ENSUMAG00000023913 ENSUMAG00000023912 TMED9 (ENSUMAG00000023911) ENSUMAG00000023907 YTHDC2 (ENSUMAG00000023877) ENSUMAG00000023868 TRIM36 (ENSUMAG00000023860) PGGT1B (ENSUMAG00000023804) CCDC112 (ENSUMAG00000023800) ENSUMAG00000023798 FEM1C (ENSUMAG00000023793) TMED7 (ENSUMAG00000023788) CDO1 (ENSUMAG00000023783) ATG12 (ENSUMAG00000023779) ENSUMAG00000023776 AP3S1 (ENSUMAG00000023774) ##22 LVRN (ENSUMAG00000023675) ARL14EPL (ENSUMAG00000023673) COMMD10 (ENSUMAG00000023669) American black bear MODERN SPECIES 4243 ENSUAMG00000026271 AP3S1 (ENSUAMG00000026232) ##22 LVRN (ENSUAMG00000026227) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 6 ENSAMEG00000011819 GDF11 (ENSAMEG00000011806) SARNP (ENSAMEG00000011769) ORMDL2 (ENSAMEG00000003047) DNAJC14 (ENSAMEG00000003053) ENSAMEG00000003061 MMP19 (ENSAMEG00000003068) PYM1 (ENSAMEG00000025799) DGKA (ENSAMEG00000003094) PMEL (ENSAMEG00000003145) ENSAMEG00000003168 RAB5B (ENSAMEG00000003196) SUOX (ENSAMEG00000003226) IKZF4 (ENSAMEG00000003228) RPS26 (ENSAMEG00000003260) ENSAMEG00000025903 ##22 ERBB3 (ENSAMEG00000003273) PA2G4 (ENSAMEG00000003380) ENSAMEG00000031225 ZC3H10 (ENSAMEG00000019365) ESYT1 (ENSAMEG00000003434) MYL6B (ENSAMEG00000003509) ENSAMEG00000012586 SMARCC2 (ENSAMEG00000003536) RNF41 (ENSAMEG00000003610) NABP2 (ENSAMEG00000003630) SLC39A5 (ENSAMEG00000003645) ANKRD52 (ENSAMEG00000003658) COQ10A (ENSAMEG00000003762) CS (ENSAMEG00000003774) CNPY2 (ENSAMEG00000003822) Giant Panda MODERN SPECIES 5 ONECUT2 (ENSAMEG00000025402) ST8SIA3 (ENSAMEG00000014804) WDR7 (ENSAMEG00000014743) TXNL1 (ENSAMEG00000014729) TCF4 (ENSAMEG00000017162) CCDC68 (ENSAMEG00000017171) RAB27B (ENSAMEG00000017177) ENSAMEG00000031006 ENSAMEG00000031262 ENSAMEG00000003344 C18orf54 (ENSAMEG00000017187) STARD6 (ENSAMEG00000017188) POLI (ENSAMEG00000017194) MBD2 (ENSAMEG00000017208) DCC (ENSAMEG00000017215) ENSAMEG00000002879 ##22 MEX3C (ENSAMEG00000002897) SMAD4 (ENSAMEG00000002899) ELAC1 (ENSAMEG00000002931) ME2 (ENSAMEG00000002933) MRO (ENSAMEG00000002971) MAPK4 (ENSAMEG00000026715) SKA1 (ENSAMEG00000000280) CXXC1 (ENSAMEG00000000259) MBD1 (ENSAMEG00000000238) MYO5B (ENSAMEG00000009253) ACAA2 (ENSAMEG00000009411) LIPG (ENSAMEG00000009434) RPL17 (ENSAMEG00000009498) ENSAMEG00000027976 DYM (ENSAMEG00000006724) Giant Panda MODERN SPECIES 13 ENSAMEG00000006518 ENSAMEG00000006527 ENSAMEG00000027599 ENSAMEG00000006569 ENSAMEG00000006598 ENSAMEG00000031525 TRIM36 (ENSAMEG00000000690) PGGT1B (ENSAMEG00000000666) CCDC112 (ENSAMEG00000000658) ENSAMEG00000000652 FEM1C (ENSAMEG00000000648) TICAM2 (ENSAMEG00000019844) TMED7 (ENSAMEG00000000644) ENSAMEG00000023816 ATG12 (ENSAMEG00000017052) ENSAMEG00000017045 ##22 ENSAMEG00000025935 LVRN (ENSAMEG00000017013) ARL14EPL (ENSAMEG00000027367) COMMD10 (ENSAMEG00000016993) SEMA6A (ENSAMEG00000015546) DTWD2 (ENSAMEG00000015588) DMXL1 (ENSAMEG00000015597) TNFAIP8 (ENSAMEG00000015672) HSD17B4 (ENSAMEG00000015674) FAM170A (ENSAMEG00000015742) ENSAMEG00000018048 FTMT (ENSAMEG00000018885) ENSAMEG00000018050 LOX (ENSAMEG00000018055) ENSAMEG00000018896 Felidae ANCESTRAL SPECIES 6 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b.c.b ENSGT00530000064208.a Cat DUPLICATION Cat MODERN SPECIES TMED9 (ENSFCAG00000042521) ENSFCAG00000029704 YTHDC2 (ENSFCAG00000031967) ENSFCAG00000039495 ENSFCAG00000048334 KCNN2 (ENSFCAG00000025355) TRIM36 (ENSFCAG00000027907) PGGT1B (ENSFCAG00000022930) CCDC112 (ENSFCAG00000028633) ENSFCAG00000030675 FEM1C (ENSFCAG00000028594) TICAM2 (ENSFCAG00000002053) TMED7 (ENSFCAG00000033480) CDO1 (ENSFCAG00000031576) ATG12 (ENSFCAG00000007604) ENSFCAG00000029920 ##22 LVRN (ENSFCAG00000029766) ARL14EPL (ENSFCAG00000030457) COMMD10 (ENSFCAG00000025195) SEMA6A (ENSFCAG00000012585) DTWD2 (ENSFCAG00000008486) DMXL1 (ENSFCAG00000009183) TNFAIP8 (ENSFCAG00000038496) ENSFCAG00000035062 HSD17B4 (ENSFCAG00000008425) FAM170A (ENSFCAG00000024805) PRR16 (ENSFCAG00000022947) ENSFCAG00000043811 ENSFCAG00000023871 ENSFCAG00000029755 SRFBP1 (ENSFCAG00000035118) Cat DUPLICATION Cat DUPLICATION Cat MODERN SPECIES 252 USP51 (ENSFCAG00000043768) ENSFCAG00000026228 RRAGB (ENSFCAG00000013932) KLF8 (ENSFCAG00000012644) ENSFCAG00000031959 ENSFCAG00000041680 UBQLN2 (ENSFCAG00000014297) NBDY (ENSFCAG00000040038) ENSFCAG00000045356 ENSFCAG00000041144 ENSFCAG00000046590 ENSFCAG00000042302 ENSFCAG00000041079 ##22 ENSFCAG00000042115 ##22 ENSFCAG00000005774 ENSFCAG00000039754 ##22 ENSFCAG00000051575 ENSFCAG00000048224 ENSFCAG00000049316 ENSFCAG00000052234 SPIN4 (ENSFCAG00000003939) ARHGEF9 (ENSFCAG00000008079) AMER1 (ENSFCAG00000005090) ASB12 (ENSFCAG00000005093) ENSFCAG00000053160 ENSFCAG00000023157 ZC4H2 (ENSFCAG00000030156) ZC3H12B (ENSFCAG00000032299) LAS1L (ENSFCAG00000007060) ENSFCAG00000037159 MSN (ENSFCAG00000013821) Cat MODERN SPECIES 252 ZC3H12B (ENSFCAG00000032299) ZC4H2 (ENSFCAG00000030156) ENSFCAG00000023157 ENSFCAG00000053160 ASB12 (ENSFCAG00000005093) AMER1 (ENSFCAG00000005090) ARHGEF9 (ENSFCAG00000008079) SPIN4 (ENSFCAG00000003939) ENSFCAG00000052234 ENSFCAG00000049316 ENSFCAG00000048224 ENSFCAG00000051575 ENSFCAG00000039754 ##22 ENSFCAG00000005774 ENSFCAG00000042115 ##22 ENSFCAG00000041079 ##22 ENSFCAG00000042302 ENSFCAG00000046590 ENSFCAG00000041144 ENSFCAG00000045356 NBDY (ENSFCAG00000040038) UBQLN2 (ENSFCAG00000014297) ENSFCAG00000041680 ENSFCAG00000031959 KLF8 (ENSFCAG00000012644) RRAGB (ENSFCAG00000013932) ENSFCAG00000026228 USP51 (ENSFCAG00000043768) APEX2 (ENSFCAG00000021990) ALAS2 (ENSFCAG00000000908) PFKFB1 (ENSFCAG00000000906) Cat MODERN SPECIES 252 LAS1L (ENSFCAG00000007060) ZC3H12B (ENSFCAG00000032299) ZC4H2 (ENSFCAG00000030156) ENSFCAG00000023157 ENSFCAG00000053160 ASB12 (ENSFCAG00000005093) AMER1 (ENSFCAG00000005090) ARHGEF9 (ENSFCAG00000008079) SPIN4 (ENSFCAG00000003939) ENSFCAG00000052234 ENSFCAG00000049316 ENSFCAG00000048224 ENSFCAG00000051575 ENSFCAG00000039754 ##22 ENSFCAG00000005774 ENSFCAG00000042115 ##22 ENSFCAG00000041079 ##22 ENSFCAG00000042302 ENSFCAG00000046590 ENSFCAG00000041144 ENSFCAG00000045356 NBDY (ENSFCAG00000040038) UBQLN2 (ENSFCAG00000014297) ENSFCAG00000041680 ENSFCAG00000031959 KLF8 (ENSFCAG00000012644) RRAGB (ENSFCAG00000013932) ENSFCAG00000026228 USP51 (ENSFCAG00000043768) APEX2 (ENSFCAG00000021990) ALAS2 (ENSFCAG00000000908) Cat MODERN SPECIES 241 SNX19 (ENSFCAG00000032007) ADAMTS15 (ENSFCAG00000008344) ADAMTS8 (ENSFCAG00000027680) ZBTB44 (ENSFCAG00000030480) ST14 (ENSFCAG00000009498) APLP2 (ENSFCAG00000009497) PRDM10 (ENSFCAG00000004111) NFRKB (ENSFCAG00000004110) TMEM45B (ENSFCAG00000036188) BARX2 (ENSFCAG00000002881) ARHGAP32 (ENSFCAG00000013062) KCNJ5 (ENSFCAG00000035352) KCNJ1 (ENSFCAG00000013060) FLI1 (ENSFCAG00000042373) ETS1 (ENSFCAG00000018598) ENSFCAG00000050856 ##22 KIRREL3 (ENSFCAG00000011277) ST3GAL4 (ENSFCAG00000011276) TIRAP (ENSFCAG00000046185) FOXRED1 (ENSFCAG00000004180) SRPRA (ENSFCAG00000011274) FAM118B (ENSFCAG00000005343) RPUSD4 (ENSFCAG00000029789) CDON (ENSFCAG00000005342) VSIG10L2 (ENSFCAG00000041620) DDX25 (ENSFCAG00000005341) PUS3 (ENSFCAG00000005340) HYLS1 (ENSFCAG00000042201) PATE3 (ENSFCAG00000040318) PATE2 (ENSFCAG00000046618) ENSFCAG00000039307 Panthera ANCESTRAL SPECIES 6 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b.d Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000165429.b ENSGT00940000155826 ENSGT01030000239591 ENSGT00940000175410 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00390000010089.e.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a lion DUPLICATION lion MODERN SPECIES ENSPLOG00000000713 YTHDC2 (ENSPLOG00000000766) ENSPLOG00000000907 ENSPLOG00000000914 KCNN2 (ENSPLOG00000000930) TRIM36 (ENSPLOG00000000972) PGGT1B (ENSPLOG00000001018) CCDC112 (ENSPLOG00000001056) ENSPLOG00000001081 ENSPLOG00000001087 FEM1C (ENSPLOG00000001108) TICAM2 (ENSPLOG00000001118) TMED7 (ENSPLOG00000001132) CDO1 (ENSPLOG00000001141) ATG12 (ENSPLOG00000001154) ENSPLOG00000001177 ##22 LVRN (ENSPLOG00000001218) ARL14EPL (ENSPLOG00000001268) COMMD10 (ENSPLOG00000001282) SEMA6A (ENSPLOG00000001344) DTWD2 (ENSPLOG00000001432) DMXL1 (ENSPLOG00000001523) TNFAIP8 (ENSPLOG00000001664) HSD17B4 (ENSPLOG00000001741) FAM170A (ENSPLOG00000001935) PRR16 (ENSPLOG00000001960) ENSPLOG00000001971 ENSPLOG00000001979 FTMT (ENSPLOG00000001991) SRFBP1 (ENSPLOG00000002002) LOX (ENSPLOG00000002024) lion MODERN SPECIES 10 SNX19 (ENSPLOG00000012584) ADAMTS15 (ENSPLOG00000012479) ADAMTS8 (ENSPLOG00000012358) ZBTB44 (ENSPLOG00000012312) ST14 (ENSPLOG00000012141) APLP2 (ENSPLOG00000011946) PRDM10 (ENSPLOG00000011348) NFRKB (ENSPLOG00000011240) TMEM45B (ENSPLOG00000011174) BARX2 (ENSPLOG00000011119) ARHGAP32 (ENSPLOG00000010869) KCNJ5 (ENSPLOG00000010643) KCNJ1 (ENSPLOG00000010614) FLI1 (ENSPLOG00000010557) ETS1 (ENSPLOG00000010415) ENSPLOG00000010342 ##22 KIRREL3 (ENSPLOG00000010084) ST3GAL4 (ENSPLOG00000009837) DCPS (ENSPLOG00000009768) TIRAP (ENSPLOG00000009748) FOXRED1 (ENSPLOG00000009667) SRPRA (ENSPLOG00000009505) FAM118B (ENSPLOG00000009436) RPUSD4 (ENSPLOG00000009314) CDON (ENSPLOG00000009274) VSIG10L2 (ENSPLOG00000009191) DDX25 (ENSPLOG00000009065) PUS3 (ENSPLOG00000009029) HYLS1 (ENSPLOG00000009006) CHEK1 (ENSPLOG00000008775) STT3A (ENSPLOG00000008673) leopard DUPLICATION leopard MODERN SPECIES 22 ENSPPRG00000011625 ENSPPRG00000022168 ENSPPRG00000011457 ENSPPRG00000022127 ENSPPRG00000010399 RECQL (ENSPPRG00000010371) GOLT1B (ENSPPRG00000010001) SPX (ENSPPRG00000007920) GYS2 (ENSPPRG00000007651) ENSPPRG00000007295 KCNJ8 (ENSPPRG00000007195) ABCC9 (ENSPPRG00000007122) CMAS (ENSPPRG00000004115) ENSPPRG00000004010 ST8SIA1 (ENSPPRG00000003913) ENSPPRG00000021807 ##22 C2CD5 (ENSPPRG00000003405) ETNK1 (ENSPPRG00000023960) ENSPPRG00000024478 ENSPPRG00000015924 BCAT1 (ENSPPRG00000014007) IRAG2 (ENSPPRG00000011474) DNAI7 (ENSPPRG00000009751) ETFRF1 (ENSPPRG00000008544) KRAS (ENSPPRG00000007389) ENSPPRG00000021326 LMNTD1 (ENSPPRG00000005840) ENSPPRG00000002786 RASSF8 (ENSPPRG00000002732) BHLHE41 (ENSPPRG00000002206) SSPN (ENSPPRG00000001270) leopard MODERN SPECIES 56 ENSPPRG00000000984 YTHDC2 (ENSPPRG00000001595) ENSPPRG00000001834 ENSPPRG00000001935 KCNN2 (ENSPPRG00000003196) TRIM36 (ENSPPRG00000004286) PGGT1B (ENSPPRG00000005679) CCDC112 (ENSPPRG00000006736) ENSPPRG00000007175 FEM1C (ENSPPRG00000007481) ENSPPRG00000007561 TICAM2 (ENSPPRG00000016760) TMED7 (ENSPPRG00000007911) CDO1 (ENSPPRG00000008000) ATG12 (ENSPPRG00000008425) ENSPPRG00000008578 ##22 LVRN (ENSPPRG00000009237) ARL14EPL (ENSPPRG00000009493) COMMD10 (ENSPPRG00000009874) SEMA6A (ENSPPRG00000011633) DTWD2 (ENSPPRG00000013766) DMXL1 (ENSPPRG00000024667) TNFAIP8 (ENSPPRG00000024534) ENSPPRG00000024484 HSD17B4 (ENSPPRG00000022809) FAM170A (ENSPPRG00000000102) PRR16 (ENSPPRG00000000288) ENSPPRG00000000460 ENSPPRG00000001192 FTMT (ENSPPRG00000017740) SRFBP1 (ENSPPRG00000001695) leopard MODERN SPECIES 43 FECH (ENSPPRG00000014934) ONECUT2 (ENSPPRG00000013061) ST8SIA3 (ENSPPRG00000012927) WDR7 (ENSPPRG00000011801) TXNL1 (ENSPPRG00000007810) ENSPPRG00000017776 TCF4 (ENSPPRG00000006150) CCDC68 (ENSPPRG00000005242) RAB27B (ENSPPRG00000004858) C18orf54 (ENSPPRG00000004732) STARD6 (ENSPPRG00000004011) POLI (ENSPPRG00000003673) MBD2 (ENSPPRG00000001698) DCC (ENSPPRG00000000462) ENSPPRG00000015809 ENSPPRG00000013111 ##22 MEX3C (ENSPPRG00000012151) SMAD4 (ENSPPRG00000010397) ELAC1 (ENSPPRG00000009439) ME2 (ENSPPRG00000008913) MRO (ENSPPRG00000004466) MAPK4 (ENSPPRG00000003118) SKA1 (ENSPPRG00000002324) CXXC1 (ENSPPRG00000001170) MBD1 (ENSPPRG00000021387) CFAP53 (ENSPPRG00000012971) MYO5B (ENSPPRG00000012444) ACAA2 (ENSPPRG00000009885) LIPG (ENSPPRG00000009382) ENSPPRG00000006166 ENSPPRG00000004942 leopard MODERN SPECIES 85 SNX19 (ENSPPRG00000012752) ADAMTS15 (ENSPPRG00000012990) ADAMTS8 (ENSPPRG00000016281) ZBTB44 (ENSPPRG00000024110) ST14 (ENSPPRG00000023767) APLP2 (ENSPPRG00000001219) PRDM10 (ENSPPRG00000007002) NFRKB (ENSPPRG00000007858) TMEM45B (ENSPPRG00000008100) BARX2 (ENSPPRG00000008204) ARHGAP32 (ENSPPRG00000009216) KCNJ5 (ENSPPRG00000009786) KCNJ1 (ENSPPRG00000010007) FLI1 (ENSPPRG00000011704) ETS1 (ENSPPRG00000015595) ENSPPRG00000017988 ##22 KIRREL3 (ENSPPRG00000024377) ST3GAL4 (ENSPPRG00000024002) ENSPPRG00000023463 DCPS (ENSPPRG00000023157) TIRAP (ENSPPRG00000022828) FOXRED1 (ENSPPRG00000000073) SRPRA (ENSPPRG00000001542) FAM118B (ENSPPRG00000002583) RPUSD4 (ENSPPRG00000003081) CDON (ENSPPRG00000004720) VSIG10L2 (ENSPPRG00000004862) DDX25 (ENSPPRG00000005392) HYLS1 (ENSPPRG00000015126) PUS3 (ENSPPRG00000005662) ENSPPRG00000005737 leopard MODERN SPECIES 68 ENSPPRG00000020386 ENSPPRG00000019868 ENSPPRG00000018134 MYL3 (ENSPPRG00000017289) PTH1R (ENSPPRG00000016608) CCDC12 (ENSPPRG00000013547) NBEAL2 (ENSPPRG00000012827) ENSPPRG00000010154 SETD2 (ENSPPRG00000008991) ENSPPRG00000008506 KIF9 (ENSPPRG00000007301) KLHL18 (ENSPPRG00000005490) PTPN23 (ENSPPRG00000004323) SCAP (ENSPPRG00000003522) ELP6 (ENSPPRG00000002371) ENSPPRG00000001869 ##22 CSPG5 (ENSPPRG00000000365) SMARCC1 (ENSPPRG00000000113) DHX30 (ENSPPRG00000022811) ENSPPRG00000014672 ENSPPRG00000013515 CDC25A (ENSPPRG00000013158) CAMP (ENSPPRG00000012470) NME6 (ENSPPRG00000012209) SPINK8 (ENSPPRG00000010293) ENSPPRG00000009932 PLXNB1 (ENSPPRG00000009709) CCDC51 (ENSPPRG00000007777) ENSPPRG00000007402 ATRIP (ENSPPRG00000004974) TREX1 (ENSPPRG00000014884) Tiger DUPLICATION Tiger MODERN SPECIES 195 ENSPTIG00000010078 RECQL (ENSPTIG00000008593) GOLT1B (ENSPTIG00000008388) SPX (ENSPTIG00000008301) GYS2 (ENSPTIG00000008157) ENSPTIG00000008118 KCNJ8 (ENSPTIG00000007885) ABCC9 (ENSPTIG00000006749) CMAS (ENSPTIG00000006449) ENSPTIG00000006008 ST8SIA1 (ENSPTIG00000005896) ENSPTIG00000010057 ##22 C2CD5 (ENSPTIG00000005651) ETNK1 (ENSPTIG00000005035) Tiger MODERN SPECIES 249 TRIM36 (ENSPTIG00000021923) PGGT1B (ENSPTIG00000006341) CCDC112 (ENSPTIG00000010373) FEM1C (ENSPTIG00000013633) TICAM2 (ENSPTIG00000000327) TMED7 (ENSPTIG00000014069) CDO1 (ENSPTIG00000015172) ATG12 (ENSPTIG00000015877) AP3S1 (ENSPTIG00000016401) ##22 LVRN (ENSPTIG00000017608) ARL14EPL (ENSPTIG00000002228) COMMD10 (ENSPTIG00000005286) SEMA6A (ENSPTIG00000007923) DTWD2 (ENSPTIG00000010333) DMXL1 (ENSPTIG00000011204) TNFAIP8 (ENSPTIG00000013091) HSD17B4 (ENSPTIG00000015739) FAM170A (ENSPTIG00000008969) PRR16 (ENSPTIG00000009993) FTMT (ENSPTIG00000010963) SRFBP1 (ENSPTIG00000012305) LOX (ENSPTIG00000013146) ENSPTIG00000014365 SNCAIP (ENSPTIG00000016473) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT01090000263342 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b.d Equus ANCESTRAL SPECIES 6 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT01090000263342 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000154267.A.g ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Donkey MODERN SPECIES 2 SRP19 (ENSEASG00005029127) REEP5 (ENSEASG00005015179) DCP2 (ENSEASG00005015174) MCC (ENSEASG00005015148) YTHDC2 (ENSEASG00005015135) KCNN2 (ENSEASG00005015131) TRIM36 (ENSEASG00005015127) ENSEASG00005026996 PGGT1B (ENSEASG00005015112) CCDC112 (ENSEASG00005015106) ENSEASG00005036333 FEM1C (ENSEASG00005015099) ENSEASG00005032432 TMED7 (ENSEASG00005015082) CDO1 (ENSEASG00005032347) ENSEASG00005015071 ##22 ATG12 (ENSEASG00005031207) LVRN (ENSEASG00005015025) ARL14EPL (ENSEASG00005025210) COMMD10 (ENSEASG00005014997) SEMA6A (ENSEASG00005038536) ENSEASG00005031598 Horse MODERN SPECIES 5 REEP5 (ENSECAG00000007767) DCP2 (ENSECAG00000005486) MCC (ENSECAG00000023118) YTHDC2 (ENSECAG00000020630) KCNN2 (ENSECAG00000020082) TRIM36 (ENSECAG00000017915) ENSECAG00000057899 PGGT1B (ENSECAG00000016179) CCDC112 (ENSECAG00000014982) ENSECAG00000014925 FEM1C (ENSECAG00000014199) TICAM2 (ENSECAG00000012844) TMED7 (ENSECAG00000040308) CDO1 (ENSECAG00000012826) ATG12 (ENSECAG00000012452) AP3S1 (ENSECAG00000010712) ##22 LVRN (ENSECAG00000009580) ARL14EPL (ENSECAG00000035490) COMMD10 (ENSECAG00000008378) SEMA6A (ENSECAG00000006827) DTWD2 (ENSECAG00000006729) DMXL1 (ENSECAG00000023584) TNFAIP8 (ENSECAG00000023583) HSD17B4 (ENSECAG00000017805) FAM170A (ENSECAG00000017548) PRR16 (ENSECAG00000016902) ENSECAG00000001605 FTMT (ENSECAG00000036892) SRFBP1 (ENSECAG00000015330) ENSECAG00000001436 LOX (ENSECAG00000014771) Chiroptera ANCESTRAL SPECIES 1 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT01090000263342 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b.d Megabat MODERN SPECIES 452 CDO1 (ENSPVAG00000006570) ATG12 (ENSPVAG00000006572) AP3S1 (ENSPVAG00000006575) ##22 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT01090000263342 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b.d Microbat MODERN SPECIES 937 DCP2 (ENSMLUG00000012772) ENSMLUG00000023305 ENSMLUG00000012778 YTHDC2 (ENSMLUG00000006106) KCNN2 (ENSMLUG00000002106) TRIM36 (ENSMLUG00000017654) PGGT1B (ENSMLUG00000017655) CCDC112 (ENSMLUG00000003181) ENSMLUG00000029845 FEM1C (ENSMLUG00000024046) TICAM2 (ENSMLUG00000007075) TMED7 (ENSMLUG00000016042) CDO1 (ENSMLUG00000002751) ENSMLUG00000025012 ATG12 (ENSMLUG00000002759) AP3S1 (ENSMLUG00000002769) ##22 LVRN (ENSMLUG00000010725) ARL14EPL (ENSMLUG00000027907) COMMD10 (ENSMLUG00000010780) SEMA6A (ENSMLUG00000009289) ENSMLUG00000025248 DTWD2 (ENSMLUG00000002813) DMXL1 (ENSMLUG00000009331) TNFAIP8 (ENSMLUG00000009398) HSD17B4 (ENSMLUG00000009404) FAM170A (ENSMLUG00000015098) ENSMLUG00000023391 ENSMLUG00000022953 PRR16 (ENSMLUG00000016069) ENSMLUG00000030652 SRFBP1 (ENSMLUG00000009984) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 25 SRP19 (ENSRFEG00010014122) ENSRFEG00010014379 DCP2 (ENSRFEG00010014503) MCC (ENSRFEG00010014587) YTHDC2 (ENSRFEG00010014696) KCNN2 (ENSRFEG00010014816) TRIM36 (ENSRFEG00010015023) ENSRFEG00010015267 PGGT1B (ENSRFEG00010015339) CCDC112 (ENSRFEG00010015398) FEM1C (ENSRFEG00010015503) TICAM2 (ENSRFEG00010015550) TMED7 (ENSRFEG00010015561) CDO1 (ENSRFEG00010015621) ATG12 (ENSRFEG00010015661) ENSRFEG00010015701 ##22 LVRN (ENSRFEG00010015919) ARL14EPL (ENSRFEG00010016221) COMMD10 (ENSRFEG00010016287) SEMA6A (ENSRFEG00010016377) ENSRFEG00010016527 DTWD2 (ENSRFEG00010016592) DMXL1 (ENSRFEG00010016794) TNFAIP8 (ENSRFEG00010017937) HSD17B4 (ENSRFEG00010018033) FAM170A (ENSRFEG00010018721) ENSRFEG00010018780 PRR16 (ENSRFEG00010018796) FTMT (ENSRFEG00010018860) ENSRFEG00010018872 LOX (ENSRFEG00010018895) Greater horseshoe bat MODERN SPECIES 30 MASTL (ENSRFEG00010013997) ACBD5 (ENSRFEG00010013312) ABI1 (ENSRFEG00010012869) PDSS1 (ENSRFEG00010012655) ENSRFEG00010012518 APBB1IP (ENSRFEG00010012424) GAD2 (ENSRFEG00010012347) MYO3A (ENSRFEG00010011683) GPR158 (ENSRFEG00010011440) ENSRFEG00010011414 THNSL1 (ENSRFEG00010011393) ENKUR (ENSRFEG00010011340) PRTFDC1 (ENSRFEG00010011247) ARHGAP21 (ENSRFEG00010011157) ENSRFEG00010011089 ENSRFEG00010011032 ##22 KIAA1217 (ENSRFEG00010010439) OTUD1 (ENSRFEG00010010260) PTF1A (ENSRFEG00010009952) ENSRFEG00010009887 ENSRFEG00010009810 ARMC3 (ENSRFEG00010009262) ENSRFEG00010009171 ENSRFEG00010009143 ENSRFEG00010009094 ENSRFEG00010009031 ENSRFEG00010008641 BMI1 (ENSRFEG00010008566) COMMD3 (ENSRFEG00010008507) DNAJC1 (ENSRFEG00010008428) MLLT10 (ENSRFEG00010008217) Greater horseshoe bat MODERN SPECIES 11 PARL (ENSRFEG00010020770) MAP6D1 (ENSRFEG00010020813) YEATS2 (ENSRFEG00010020847) ENSRFEG00010020902 KLHL24 (ENSRFEG00010020928) ENSRFEG00010020947 MCF2L2 (ENSRFEG00010021002) B3GNT5 (ENSRFEG00010021062) ENSRFEG00010021072 MCCC1 (ENSRFEG00010021096) ENSRFEG00010021147 DCUN1D1 (ENSRFEG00010021156) ATP11B (ENSRFEG00010021177) ENSRFEG00010021233 ENSRFEG00010021250 ENSRFEG00010021268 ##22 DNAJC19 (ENSRFEG00010021277) FXR1 (ENSRFEG00010021302) CCDC39 (ENSRFEG00010021385) TTC14 (ENSRFEG00010021404) PEX5L (ENSRFEG00010021467) ENSRFEG00010021630 USP13 (ENSRFEG00010021639) ENSRFEG00010021670 MRPL47 (ENSRFEG00010021687) ACTL6A (ENSRFEG00010021704) GNB4 (ENSRFEG00010021722) MFN1 (ENSRFEG00010021730) ZNF639 (ENSRFEG00010021744) ENSRFEG00010021748 PIK3CA (ENSRFEG00010021761) Artiodactyla ANCESTRAL SPECIES 8 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Camelidae ANCESTRAL SPECIES 1 ENSGT00940000157873 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT01030000237225 ENSGT00530000064208.b.d Alpaca MODERN SPECIES 1167 TRIM36 (ENSVPAG00000006982) PGGT1B (ENSVPAG00000006983) CCDC112 (ENSVPAG00000006984) FEM1C (ENSVPAG00000006985) CDO1 (ENSVPAG00000006988) ENSVPAG00000006989 AP3S1 (ENSVPAG00000006990) ##22 Arabian camel MODERN SPECIES 22 ENSCDRG00005006960 SRP19 (ENSCDRG00005006801) APC (ENSCDRG00005006618) EPB41L4A (ENSCDRG00005006407) NREP (ENSCDRG00005006335) YTHDC2 (ENSCDRG00005006237) KCNN2 (ENSCDRG00005006168) TRIM36 (ENSCDRG00005006092) PGGT1B (ENSCDRG00005006037) CCDC112 (ENSCDRG00005006015) FEM1C (ENSCDRG00005005986) ENSCDRG00005005978 TMED7 (ENSCDRG00005005969) CDO1 (ENSCDRG00005005956) ATG12 (ENSCDRG00005005929) AP3S1 (ENSCDRG00005005844) ##22 LVRN (ENSCDRG00005005784) ARL14EPL (ENSCDRG00005005769) COMMD10 (ENSCDRG00005005749) SEMA6A (ENSCDRG00005005608) ENSCDRG00005005579 DTWD2 (ENSCDRG00005005501) DMXL1 (ENSCDRG00005005415) TNFAIP8 (ENSCDRG00005005377) HSD17B4 (ENSCDRG00005005096) FAM170A (ENSCDRG00005005051) PRR16 (ENSCDRG00005005018) FTMT (ENSCDRG00005004988) SRFBP1 (ENSCDRG00005004973) LOX (ENSCDRG00005004961) ENSCDRG00005004924 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Pecora ANCESTRAL SPECIES 6 ENSGT00940000157873 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b ENSGT00940000156667 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000157873 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b ENSGT00940000156667 Siberian musk deer MODERN SPECIES 68 ENSMMSG00000014046 ENSMMSG00000014055 PGGT1B (ENSMMSG00000014090) CCDC112 (ENSMMSG00000014151) FEM1C (ENSMMSG00000014174) TICAM2 (ENSMMSG00000014189) ENSMMSG00000014204 CDO1 (ENSMMSG00000014221) ATG12 (ENSMMSG00000014245) ENSMMSG00000014265 ##22 ENSMMSG00000014284 LVRN (ENSMMSG00000014307) ENSMMSG00000014383 ENSMMSG00000014394 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000164712 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b ENSGT00940000156667 Bovinae ANCESTRAL SPECIES 33 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00530000064130.v ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00390000009040.b ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b American bison DUPLICATION American bison MODERN SPECIES 3203 ENSBBBG00000024402 ENSBBBG00000006353 ENSBBBG00000024386 ENSBBBG00000024374 ENSBBBG00000024370 ENSBBBG00000024353 ##22 MEX3C (ENSBBBG00000024341) ENSBBBG00000008185 SMAD4 (ENSBBBG00000006334) ELAC1 (ENSBBBG00000006313) ME2 (ENSBBBG00000008872) MRO (ENSBBBG00000006228) ENSBBBG00000023864 SKA1 (ENSBBBG00000023845) CXXC1 (ENSBBBG00000023808) MBD1 (ENSBBBG00000023724) CFAP53 (ENSBBBG00000006869) ENSBBBG00000023085 ENSBBBG00000006043 ACAA2 (ENSBBBG00000006039) LIPG (ENSBBBG00000022975) American bison MODERN SPECIES 2965 IL36RN (ENSBBBG00000016741) ENSBBBG00000007457 IL36A (ENSBBBG00000016723) ENSBBBG00000016695 ENSBBBG00000016684 IL37 (ENSBBBG00000007905) IL1B (ENSBBBG00000004109) IL1A (ENSBBBG00000004101) CKAP2L (ENSBBBG00000004092) SLC20A1 (ENSBBBG00000000738) CHCHD5 (ENSBBBG00000000764) POLR1B (ENSBBBG00000016563) TTL (ENSBBBG00000016409) ENSBBBG00000007420 NCK2 (ENSBBBG00000016393) ENSBBBG00000007140 ##22 ECRG4 (ENSBBBG00000016383) American bison MODERN SPECIES 3335 ENSBBBG00000021125 ENSBBBG00000021112 TRIM36 (ENSBBBG00000021103) PGGT1B (ENSBBBG00000005654) CCDC112 (ENSBBBG00000021016) FEM1C (ENSBBBG00000020944) TICAM2 (ENSBBBG00000020935) TMED7 (ENSBBBG00000020932) CDO1 (ENSBBBG00000020923) ATG12 (ENSBBBG00000020907) ENSBBBG00000020893 ##22 ENSBBBG00000007188 LVRN (ENSBBBG00000020819) ENSBBBG00000020745 ENSBBBG00000005593 KIAA1191 (ENSBBBG00000009081) ENSBBBG00000020711 THOC3 (ENSBBBG00000020694) CPLX2 (ENSBBBG00000005575) HRH2 (ENSBBBG00000020673) SFXN1 (ENSBBBG00000005572) DRD1 (ENSBBBG00000005565) Bos ANCESTRAL SPECIES 31 ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00530000064130.v ENSGT00950000185427 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654.d ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00390000009040.b ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b Bos_a ANCESTRAL SPECIES 28 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 ENSGT00950000183065.C ENSGT00940000157449 ENSGT00730000111785 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 ENSGT00940000161788 ENSGT00940000159487 ENSGT00950000183005.a.b ENSGT00940000158867 ENSGT00970000193421.C.a ##22 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000155402.a.b ENSGT01030000234626.D ENSGT00940000159394 ENSGT00950000183010.a.b.a.b.b.b ENSGT00390000018741.j ENSGT00390000008772 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 2 YTHDC2 (ENSBGRG00000011689) ENSBGRG00000011641 ENSBGRG00000011606 KCNN2 (ENSBGRG00000011476) ENSBGRG00000011437 TRIM36 (ENSBGRG00000011092) ENSBGRG00000011046 PGGT1B (ENSBGRG00000010600) FEM1C (ENSBGRG00000013378) TICAM2 (ENSBGRG00000013358) TMED7 (ENSBGRG00000013314) CDO1 (ENSBGRG00000013272) ATG12 (ENSBGRG00000013211) ENSBGRG00000013178 ENSBGRG00000013141 ENSBGRG00000013036 ##22 ENSBGRG00000013012 ENSBGRG00000012981 LVRN (ENSBGRG00000012624) ENSBGRG00000012572 ENSBGRG00000012351 ENSBGRG00000012189 THOC3 (ENSBGRG00000011914) CPLX2 (ENSBGRG00000011765) HRH2 (ENSBGRG00000011598) ENSBGRG00000011575 SFXN1 (ENSBGRG00000011347) DRD1 (ENSBGRG00000011292) GCNT4 (ENSBGRG00000011247) ENSBGRG00000011228 ANKRD31 (ENSBGRG00000010828) Domestic yak MODERN SPECIES 13 ENSBGRG00000010575 ENSBGRG00000026057 ENSBGRG00000026050 TCF4 (ENSBGRG00000025535) CCDC68 (ENSBGRG00000025432) RAB27B (ENSBGRG00000025409) ENSBGRG00000025400 ENSBGRG00000025356 ENSBGRG00000025352 ENSBGRG00000025328 C18orf54 (ENSBGRG00000025272) STARD6 (ENSBGRG00000025257) POLI (ENSBGRG00000025249) MBD2 (ENSBGRG00000025200) DCC (ENSBGRG00000024683) ENSBGRG00000024631 ##22 MEX3C (ENSBGRG00000024594) SMAD4 (ENSBGRG00000024537) ELAC1 (ENSBGRG00000024517) ME2 (ENSBGRG00000024333) MRO (ENSBGRG00000024247) MAPK4 (ENSBGRG00000024208) SKA1 (ENSBGRG00000024086) CXXC1 (ENSBGRG00000023942) MBD1 (ENSBGRG00000023527) ENSBGRG00000023396 ENSBGRG00000023371 ACAA2 (ENSBGRG00000023212) LIPG (ENSBGRG00000023098) ENSBGRG00000022965 ENSBGRG00000022927 Domestic yak MODERN SPECIES 28 IL1F10 (ENSBGRG00000015059) IL36RN (ENSBGRG00000015003) ENSBGRG00000014951 ENSBGRG00000014739 IL36G (ENSBGRG00000014645) ENSBGRG00000014599 ENSBGRG00000014317 IL1B (ENSBGRG00000014234) IL1A (ENSBGRG00000014153) CKAP2L (ENSBGRG00000014090) SLC20A1 (ENSBGRG00000013607) CHCHD5 (ENSBGRG00000013449) POLR1B (ENSBGRG00000012846) TTL (ENSBGRG00000012700) NCK2 (ENSBGRG00000012573) ENSBGRG00000012543 ##22 ENSBGRG00000012496 UXS1 (ENSBGRG00000012331) ST6GAL2 (ENSBGRG00000012204) SLC5A7 (ENSBGRG00000012077) SULT1C3 (ENSBGRG00000011946) SULT1C2 (ENSBGRG00000011842) SULT1C4 (ENSBGRG00000011492) GCC2 (ENSBGRG00000010965) ENSBGRG00000010147 ENSBGRG00000010096 RANBP2 (ENSBGRG00000009160) CCDC138 (ENSBGRG00000008976) EDAR (ENSBGRG00000008919) SH3RF3 (ENSBGRG00000008832) SEPTIN10 (ENSBGRG00000008553) Wild yak DUPLICATION Wild yak MODERN SPECIES 859 ENSBMUG00000024132 ENSBMUG00000024124 ENSBMUG00000024115 ##22 MEX3C (ENSBMUG00000024106) SMAD4 (ENSBMUG00000024068) ELAC1 (ENSBMUG00000024030) ME2 (ENSBMUG00000024015) MRO (ENSBMUG00000023933) ENSBMUG00000023903 Wild yak MODERN SPECIES 1345 ENSBMUG00000014530 FEM1C (ENSBMUG00000014542) ENSBMUG00000014551 TMED7 (ENSBMUG00000014565) CDO1 (ENSBMUG00000014589) ENSBMUG00000014602 ATG12 (ENSBMUG00000014624) ENSBMUG00000014633 ENSBMUG00000014658 ##22 ENSBMUG00000014674 LVRN (ENSBMUG00000014700) ENSBMUG00000014706 ENSBMUG00000014716 KIAA1191 (ENSBMUG00000014760) SIMC1 (ENSBMUG00000014865) THOC3 (ENSBMUG00000014910) CPLX2 (ENSBMUG00000014968) Bos_b ANCESTRAL SPECIES 28 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.b.a.a ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00530000064130.v ENSGT00950000185427 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01100000263481.n.a.b.b.a.b.b.b.a.a.a ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654.d ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00390000009040.b ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b Cow DUPLICATION Cow MODERN SPECIES 1 YTHDC2 (ENSBTAG00000014099) ENSBTAG00000052874 KCNN2 (ENSBTAG00000011076) ENSBTAG00000023186 ENSBTAG00000053655 TRIM36 (ENSBTAG00000014027) PGGT1B (ENSBTAG00000001895) CCDC112 (ENSBTAG00000001898) ENSBTAG00000053987 ENSBTAG00000049873 FEM1C (ENSBTAG00000008699) TICAM2 (ENSBTAG00000002357) TMED7 (ENSBTAG00000035030) CDO1 (ENSBTAG00000017442) ATG12 (ENSBTAG00000017525) AP3S1 (ENSBTAG00000051386) ##22 ENSBTAG00000049135 LVRN (ENSBTAG00000016644) ENSBTAG00000035005 ARL14EPL (ENSBTAG00000039618) KIAA1191 (ENSBTAG00000011608) SIMC1 (ENSBTAG00000034998) THOC3 (ENSBTAG00000035174) CPLX2 (ENSBTAG00000054924) HRH2 (ENSBTAG00000044071) SFXN1 (ENSBTAG00000014536) DRD1 (ENSBTAG00000047719) GCNT4 (ENSBTAG00000050091) ANKRD31 (ENSBTAG00000024878) HMGCR (ENSBTAG00000007840) CERT1 (ENSBTAG00000000081) Cow MODERN SPECIES 2 IL36RN (ENSBTAG00000039839) IL36B (ENSBTAG00000002088) IL36A (ENSBTAG00000002087) IL36G (ENSBTAG00000002085) ENSBTAG00000039476 IL37 (ENSBTAG00000013675) IL1B (ENSBTAG00000001321) ENSBTAG00000047637 IL1A (ENSBTAG00000010349) CKAP2L (ENSBTAG00000002298) SLC20A1 (ENSBTAG00000007895) CHCHD5 (ENSBTAG00000052525) POLR1B (ENSBTAG00000014166) TTL (ENSBTAG00000014159) NCK2 (ENSBTAG00000015205) ENSBTAG00000034555 ##22 ECRG4 (ENSBTAG00000012637) UXS1 (ENSBTAG00000005614) ST6GAL2 (ENSBTAG00000000703) SLC5A7 (ENSBTAG00000004352) SULT1C3 (ENSBTAG00000002803) ENSBTAG00000054883 SULT1C2 (ENSBTAG00000038369) SULT1C4 (ENSBTAG00000032051) ENSBTAG00000054241 GCC2 (ENSBTAG00000016038) LIMS1 (ENSBTAG00000010971) ENSBTAG00000054181 RANBP2 (ENSBTAG00000000152) CCDC138 (ENSBTAG00000000157) EDAR (ENSBTAG00000019628) Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 16 ST8SIA3 (ENSBIXG00005023483) WDR7 (ENSBIXG00005006281) TXNL1 (ENSBIXG00005023757) ENSBIXG00005023809 TCF4 (ENSBIXG00005024466) CCDC68 (ENSBIXG00005024584) RAB27B (ENSBIXG00005024664) C18orf54 (ENSBIXG00005024871) STARD6 (ENSBIXG00005024888) POLI (ENSBIXG00005024986) ENSBIXG00005025038 ENSBIXG00005025041 MBD2 (ENSBIXG00005004276) DCC (ENSBIXG00005004333) ENSBIXG00005025532 ENSBIXG00005025566 ##22 MEX3C (ENSBIXG00005025578) SMAD4 (ENSBIXG00005025648) ELAC1 (ENSBIXG00005025678) ME2 (ENSBIXG00005025823) MRO (ENSBIXG00005025968) MAPK4 (ENSBIXG00005025994) SKA1 (ENSBIXG00005004443) CXXC1 (ENSBIXG00005026115) ENSBIXG00005026615 MYO5B (ENSBIXG00005026770) ACAA2 (ENSBIXG00005026872) LIPG (ENSBIXG00005004622) ENSBIXG00005007771 ENSBIXG00005027155 DYM (ENSBIXG00005027220) Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005013671 IL36A (ENSBIXG00005013806) IL36G (ENSBIXG00005013845) ENSBIXG00005005414 IL37 (ENSBIXG00005007317) IL1B (ENSBIXG00005013957) ENSBIXG00005013983 IL1A (ENSBIXG00005014003) CKAP2L (ENSBIXG00005001762) SLC20A1 (ENSBIXG00005014094) ENSBIXG00005006368 CHCHD5 (ENSBIXG00005001841) POLR1B (ENSBIXG00005005417) TTL (ENSBIXG00005007270) NCK2 (ENSBIXG00005001920) ENSBIXG00005014403 ##22 ENSBIXG00005014427 ENSBIXG00005014477 ST6GAL2 (ENSBIXG00005014556) SLC5A7 (ENSBIXG00005014585) SULT1C3 (ENSBIXG00005014602) ENSBIXG00005014605 SULT1C2 (ENSBIXG00005014659) SULT1C4 (ENSBIXG00005002082) GCC2 (ENSBIXG00005014800) ENSBIXG00005014900 ENSBIXG00005005499 RANBP2 (ENSBIXG00005015929) CCDC138 (ENSBIXG00005016061) EDAR (ENSBIXG00005002560) SH3RF3 (ENSBIXG00005016145) Hybrid Bos Indicus MODERN SPECIES 1 ENSBIXG00005020216 ENSBIXG00005003350 KCNN2 (ENSBIXG00005003338) ENSBIXG00005020161 ENSBIXG00005003309 TRIM36 (ENSBIXG00005020110) PGGT1B (ENSBIXG00005020032) CCDC112 (ENSBIXG00005019987) ENSBIXG00005019956 ENSBIXG00005003263 FEM1C (ENSBIXG00005019872) ENSBIXG00005019856 TMED7 (ENSBIXG00005019842) CDO1 (ENSBIXG00005019797) ENSBIXG00005006653 ENSBIXG00005019729 ##22 ENSBIXG00005019685 LVRN (ENSBIXG00005003207) ENSBIXG00005019537 ENSBIXG00005019533 ENSBIXG00005019517 ENSBIXG00005019496 SIMC1 (ENSBIXG00005019420) ENSBIXG00005019382 THOC3 (ENSBIXG00005019374) CPLX2 (ENSBIXG00005019325) HRH2 (ENSBIXG00005019267) SFXN1 (ENSBIXG00005019233) ENSBIXG00005019173 DRD1 (ENSBIXG00005019166) GALC (ENSBIXG00005019113) Caprinae ANCESTRAL SPECIES 30 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00530000066436 ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463.n ENSGT00390000018226 ENSGT00390000016654.b ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159721 ENSGT00940000162618 ENSGT00940000155305 ENSGT00940000155123.b ENSGT00940000156667 ENSGT00390000004454 Goat MODERN SPECIES 1 ENSCHIG00000019759 NREP (ENSCHIG00000019753) ENSCHIG00000019787 YTHDC2 (ENSCHIG00000026651) KCNN2 (ENSCHIG00000005327) TRIM36 (ENSCHIG00000017234) PGGT1B (ENSCHIG00000025476) CCDC112 (ENSCHIG00000026465) ENSCHIG00000017753 FEM1C (ENSCHIG00000015254) ENSCHIG00000024859 ENSCHIG00000011434 TMED7 (ENSCHIG00000014255) CDO1 (ENSCHIG00000021041) ENSCHIG00000024485 AP3S1 (ENSCHIG00000003228) ##22 LVRN (ENSCHIG00000025037) ENSCHIG00000017755 ENSCHIG00000013847 SIMC1 (ENSCHIG00000014687) ENSCHIG00000020697 THOC3 (ENSCHIG00000021665) CPLX2 (ENSCHIG00000026084) HRH2 (ENSCHIG00000022097) SFXN1 (ENSCHIG00000022473) DRD1 (ENSCHIG00000024371) ENSCHIG00000015735 GCNT4 (ENSCHIG00000008602) ENSCHIG00000021264 HMGCR (ENSCHIG00000015556) CERT1 (ENSCHIG00000021950) Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 23 YTHDC2 (ENSOARG00020016411) KCNN2 (ENSOARG00020017579) TRIM36 (ENSOARG00020017998) PGGT1B (ENSOARG00020018294) CCDC112 (ENSOARG00020018481) ENSOARG00020018605 FEM1C (ENSOARG00020018637) ENSOARG00020018685 TICAM2 (ENSOARG00020018851) ENSOARG00020018874 ENSOARG00020018906 ENSOARG00020019076 ENSOARG00020019117 CDO1 (ENSOARG00020019214) ATG12 (ENSOARG00020019261) ENSOARG00020019299 ##22 LVRN (ENSOARG00020019385) ARL14EPL (ENSOARG00020019935) KIAA1191 (ENSOARG00020019972) ENSOARG00020020067 THOC3 (ENSOARG00020020205) CPLX2 (ENSOARG00020020263) HRH2 (ENSOARG00020020329) SFXN1 (ENSOARG00020020382) ENSOARG00020020572 GCNT4 (ENSOARG00020020622) ENSOARG00020020636 HMGCR (ENSOARG00020020760) CERT1 (ENSOARG00020020967) POLK (ENSOARG00020021498) POC5 (ENSOARG00020021712) Rambouillet Sheep MODERN SPECIES 15 ONECUT2 (ENSOARG00020023929) ST8SIA3 (ENSOARG00020023917) WDR7 (ENSOARG00020023720) ENSOARG00020023680 TXNL1 (ENSOARG00020023636) ENSOARG00020023628 TCF4 (ENSOARG00020018136) CCDC68 (ENSOARG00020017914) RAB27B (ENSOARG00020017852) ENSOARG00020017825 STARD6 (ENSOARG00020017708) POLI (ENSOARG00020017236) MBD2 (ENSOARG00020016893) ENSOARG00020016832 DCC (ENSOARG00020016246) ENSOARG00020016162 ##22 MEX3C (ENSOARG00020016147) SMAD4 (ENSOARG00020016034) ELAC1 (ENSOARG00020015975) ME2 (ENSOARG00020015563) MRO (ENSOARG00020015446) MAPK4 (ENSOARG00020015369) SKA1 (ENSOARG00020015277) ENSOARG00020013652 MYO5B (ENSOARG00020012171) ACAA2 (ENSOARG00020011796) LIPG (ENSOARG00020011622) RPL17 (ENSOARG00020011339) C18orf32 (ENSOARG00020011289) ENSOARG00020011257 DYM (ENSOARG00020011069) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 32 GRK6 (ENSCHYG00000002474) F12 (ENSCHYG00000002373) PFN3 (ENSCHYG00000002351) SLC34A1 (ENSCHYG00000002327) RGS14 (ENSCHYG00000002298) ENSCHYG00000002287 LMAN2 (ENSCHYG00000002273) MXD3 (ENSCHYG00000002246) ENSCHYG00000002229 RAB24 (ENSCHYG00000002207) NSD1 (ENSCHYG00000002166) FGFR4 (ENSCHYG00000002101) ZNF346 (ENSCHYG00000002032) ENSCHYG00000001996 ENSCHYG00000001978 ENSCHYG00000001966 ##22 ENSCHYG00000001797 HK3 (ENSCHYG00000001675) UNC5A (ENSCHYG00000001608) TSPAN17 (ENSCHYG00000001564) EIF4E1B (ENSCHYG00000001478) ENSCHYG00000001450 GPRIN1 (ENSCHYG00000001429) CDHR2 (ENSCHYG00000001290) RNF44 (ENSCHYG00000001257) FAF2 (ENSCHYG00000001227) CLTB (ENSCHYG00000001215) ENSCHYG00000001204 NOP16 (ENSCHYG00000001193) ARL10 (ENSCHYG00000001158) ENSCHYG00000001130 Yarkand deer MODERN SPECIES 19 ENSCHYG00000024892 TCF4 (ENSCHYG00000024974) CCDC68 (ENSCHYG00000025233) RAB27B (ENSCHYG00000025256) ENSCHYG00000025287 ENSCHYG00000025310 C18orf54 (ENSCHYG00000025339) STARD6 (ENSCHYG00000025439) POLI (ENSCHYG00000025478) MBD2 (ENSCHYG00000025532) DCC (ENSCHYG00000025701) ENSCHYG00000025951 ENSCHYG00000025960 ENSCHYG00000025969 ENSCHYG00000025984 ENSCHYG00000025987 ##22 MEX3C (ENSCHYG00000025999) SMAD4 (ENSCHYG00000026027) ELAC1 (ENSCHYG00000026085) ME2 (ENSCHYG00000026116) MRO (ENSCHYG00000026169) MAPK4 (ENSCHYG00000026191) SKA1 (ENSCHYG00000026215) CXXC1 (ENSCHYG00000026245) ENSCHYG00000026350 MYO5B (ENSCHYG00000026574) ACAA2 (ENSCHYG00000026661) LIPG (ENSCHYG00000026718) ENSCHYG00000026734 C18orf32 (ENSCHYG00000026758) DYM (ENSCHYG00000026793) Yarkand deer MODERN SPECIES 3 ENSCHYG00000026966 NREP (ENSCHYG00000026969) YTHDC2 (ENSCHYG00000026975) ENSCHYG00000026995 KCNN2 (ENSCHYG00000004639) TRIM36 (ENSCHYG00000004669) PGGT1B (ENSCHYG00000004714) CCDC112 (ENSCHYG00000004740) ENSCHYG00000004769 FEM1C (ENSCHYG00000004778) TICAM2 (ENSCHYG00000004786) TMED7 (ENSCHYG00000004797) CDO1 (ENSCHYG00000004807) ATG12 (ENSCHYG00000004813) ENSCHYG00000004822 ENSCHYG00000004836 ##22 ENSCHYG00000004856 ENSCHYG00000004863 LVRN (ENSCHYG00000004890) ENSCHYG00000005015 ENSCHYG00000005024 SIMC1 (ENSCHYG00000005071) THOC3 (ENSCHYG00000005114) CPLX2 (ENSCHYG00000005163) HRH2 (ENSCHYG00000005212) SFXN1 (ENSCHYG00000005262) DRD1 (ENSCHYG00000005319) GCNT4 (ENSCHYG00000005367) ANKRD31 (ENSCHYG00000005425) HMGCR (ENSCHYG00000005715) CERT1 (ENSCHYG00000005851) Cetacea ANCESTRAL SPECIES 1 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500.e ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00940000155067.a ENSGT00940000155118.o ENSGT00940000155210.a.b.v ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000157873 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500.e ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00940000155118.o.a.a ENSGT00940000155210.a.b.v ENSGT00910000144204.a ENSGT00940000168043.a ENSGT00940000163120 Sperm whale MODERN SPECIES 19 SRP19 (ENSPCTG00005000437) APC (ENSPCTG00005000519) EPB41L4A (ENSPCTG00005000583) NREP (ENSPCTG00005000614) YTHDC2 (ENSPCTG00005000672) KCNN2 (ENSPCTG00005000807) TRIM36 (ENSPCTG00005000847) PGGT1B (ENSPCTG00005000915) ENSPCTG00005001038 ENSPCTG00005001048 FEM1C (ENSPCTG00005001053) TICAM2 (ENSPCTG00005001058) TMED7 (ENSPCTG00005001075) CDO1 (ENSPCTG00005001094) ATG12 (ENSPCTG00005001105) AP3S1 (ENSPCTG00005001130) ##22 ENSPCTG00005001157 LVRN (ENSPCTG00005001184) ARL14EPL (ENSPCTG00005001233) COMMD10 (ENSPCTG00005001255) SEMA6A (ENSPCTG00005001291) DTWD2 (ENSPCTG00005001351) DMXL1 (ENSPCTG00005001392) TNFAIP8 (ENSPCTG00005001457) HSD17B4 (ENSPCTG00005001518) ENSPCTG00005001647 ENSPCTG00005001670 FAM170A (ENSPCTG00005001681) ENSPCTG00005001691 ENSPCTG00005001696 ENSPCTG00005001702 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500.e ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00940000155118.o.a.a ENSGT00940000155210.a.b.v ENSGT00910000144204.a ENSGT00940000168043.a ENSGT00940000163120 ENSGT00390000006478 Dolphin MODERN SPECIES 239 CDO1 (ENSTTRG00000000811) ATG12 (ENSTTRG00000000812) AP3S1 (ENSTTRG00000000813) ##22 LVRN (ENSTTRG00000000815) Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500.e ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00940000155118.o.a.a ENSGT00940000155210.a.b.v ENSGT00910000144204.a ENSGT00940000168043.a ENSGT00940000163120 ENSGT00390000006478 Vaquita MODERN SPECIES 14 APC (ENSPSNG00000000765) EPB41L4A (ENSPSNG00000000729) ENSPSNG00000000693 YTHDC2 (ENSPSNG00000000643) KCNN2 (ENSPSNG00000000599) TRIM36 (ENSPSNG00000000522) PGGT1B (ENSPSNG00000000460) CCDC112 (ENSPSNG00000000411) FEM1C (ENSPSNG00000000377) TICAM2 (ENSPSNG00000000356) TMED7 (ENSPSNG00000000338) CDO1 (ENSPSNG00000000308) ENSPSNG00000000287 ENSPSNG00000000268 ENSPSNG00000000252 AP3S1 (ENSPSNG00000000228) ##22 LVRN (ENSPSNG00000000171) ARL14EPL (ENSPSNG00000000141) COMMD10 (ENSPSNG00000000130) SEMA6A (ENSPSNG00000004046) DTWD2 (ENSPSNG00000003992) DMXL1 (ENSPSNG00000003938) TNFAIP8 (ENSPSNG00000003901) ENSPSNG00000003895 HSD17B4 (ENSPSNG00000003764) FAM170A (ENSPSNG00000003684) ENSPSNG00000003671 ENSPSNG00000003662 PRR16 (ENSPSNG00000003649) ENSPSNG00000003622 FTMT (ENSPSNG00000003615) Monodontidae ANCESTRAL SPECIES 7 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000002398.c ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00910000148135 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500.e ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00940000155118.o.a.a ENSGT00940000155210.a.b.v ENSGT00910000144204.a ENSGT00940000168043.a ENSGT00940000163120 ENSGT00390000006478 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 71 APC (ENSDLEG00000020083) EPB41L4A (ENSDLEG00000020043) ENSDLEG00000020032 ENSDLEG00000020029 YTHDC2 (ENSDLEG00000020014) KCNN2 (ENSDLEG00000020006) TRIM36 (ENSDLEG00000019996) PGGT1B (ENSDLEG00000019990) CCDC112 (ENSDLEG00000019985) FEM1C (ENSDLEG00000019980) TICAM2 (ENSDLEG00000019977) TMED7 (ENSDLEG00000019975) CDO1 (ENSDLEG00000019968) ENSDLEG00000019961 ENSDLEG00000019959 AP3S1 (ENSDLEG00000019954) ##22 LVRN (ENSDLEG00000019917) ARL14EPL (ENSDLEG00000019907) COMMD10 (ENSDLEG00000019899) SEMA6A (ENSDLEG00000019862) ENSDLEG00000019855 DMXL1 (ENSDLEG00000019710) TNFAIP8 (ENSDLEG00000019674) HSD17B4 (ENSDLEG00000017089) FAM170A (ENSDLEG00000016869) Beluga whale MODERN SPECIES 13 PDGFC (ENSDLEG00000003444) GLRB (ENSDLEG00000003456) GRIA2 (ENSDLEG00000003472) ENSDLEG00000003532 FAM198B (ENSDLEG00000003538) TMEM144 (ENSDLEG00000003544) RXFP1 (ENSDLEG00000003595) ENSDLEG00000003744 ETFDH (ENSDLEG00000003749) PPID (ENSDLEG00000003789) ENSDLEG00000003799 FNIP2 (ENSDLEG00000003815) ENSDLEG00000003878 RAPGEF2 (ENSDLEG00000003915) FSTL5 (ENSDLEG00000004031) ENSDLEG00000004050 ##22 ENSDLEG00000004059 NAF1 (ENSDLEG00000004067) NPY1R (ENSDLEG00000004078) NPY5R (ENSDLEG00000004085) TMA16 (ENSDLEG00000004088) ENSDLEG00000004095 MARCH1 (ENSDLEG00000004098) ENSDLEG00000004102 ENSDLEG00000004116 ENSDLEG00000004121 NUDT9 (ENSDLEG00000004125) SPARCL1 (ENSDLEG00000004137) ENSDLEG00000004155 DMP1 (ENSDLEG00000004170) IBSP (ENSDLEG00000004177) Blue whale DUPLICATION Blue whale MODERN SPECIES 16 ENSBMSG00010009146 ETNPPL (ENSBMSG00010009166) COL25A1 (ENSBMSG00010009308) SEC24B (ENSBMSG00010010015) MCUB (ENSBMSG00010010120) CASP6 (ENSBMSG00010010157) ENSBMSG00010010200 PLA2G12A (ENSBMSG00010010216) CFI (ENSBMSG00010010282) GAR1 (ENSBMSG00010010651) RRH (ENSBMSG00010010665) LRIT3 (ENSBMSG00010010683) EGF (ENSBMSG00010010764) ELOVL6 (ENSBMSG00010011132) ENSBMSG00010011146 ENSBMSG00010011157 ##22 ENPEP (ENSBMSG00010011169) PITX2 (ENSBMSG00010011211) FAM241A (ENSBMSG00010011240) AP1AR (ENSBMSG00010011262) TIFA (ENSBMSG00010011281) NEUROG2 (ENSBMSG00010011337) ZGRF1 (ENSBMSG00010011392) LARP7 (ENSBMSG00010011549) ENSBMSG00010011560 ANK2 (ENSBMSG00010015900) ENSBMSG00010022568 CAMK2D (ENSBMSG00010022569) ARSJ (ENSBMSG00010022570) ENSBMSG00010022571 UGT8 (ENSBMSG00010022572) Blue whale MODERN SPECIES 14 APC (ENSBMSG00010004619) EPB41L4A (ENSBMSG00010004640) NREP (ENSBMSG00010004661) YTHDC2 (ENSBMSG00010012687) KCNN2 (ENSBMSG00010012710) TRIM36 (ENSBMSG00010012741) PGGT1B (ENSBMSG00010012763) CCDC112 (ENSBMSG00010012810) ENSBMSG00010012835 FEM1C (ENSBMSG00010012844) ENSBMSG00010012853 TICAM2 (ENSBMSG00010012860) TMED7 (ENSBMSG00010012865) CDO1 (ENSBMSG00010012882) ATG12 (ENSBMSG00010012891) ENSBMSG00010012898 ##22 ENSBMSG00010012910 LVRN (ENSBMSG00010012928) ARL14EPL (ENSBMSG00010012954) COMMD10 (ENSBMSG00010012960) SEMA6A (ENSBMSG00010012980) DTWD2 (ENSBMSG00010013036) ENSBMSG00010013067 ENSBMSG00010013076 DMXL1 (ENSBMSG00010013108) TNFAIP8 (ENSBMSG00010013136) HSD17B4 (ENSBMSG00010013175) ENSBMSG00010013241 FAM170A (ENSBMSG00010013274) ENSBMSG00010013295 ENSBMSG00010013304 Blue whale MODERN SPECIES 8 SLC25A32 (ENSBMSG00010017123) DCAF13 (ENSBMSG00010017074) ENSBMSG00010017040 RIMS2 (ENSBMSG00010014935) DPYS (ENSBMSG00010014661) LRP12 (ENSBMSG00010014600) ZFPM2 (ENSBMSG00010014545) OXR1 (ENSBMSG00010013992) ABRA (ENSBMSG00010013771) ANGPT1 (ENSBMSG00010013736) ENSBMSG00010013717 #18 ENSBMSG00010013702 ENSBMSG00010013695 RSPO2 (ENSBMSG00010013675) EIF3E (ENSBMSG00010013655) ENSBMSG00010013650 ##22 EMC2 (ENSBMSG00010013639) TMEM74 (ENSBMSG00010013628) TRHR (ENSBMSG00010013619) ENSBMSG00010013606 ENSBMSG00010013592 PKHD1L1 (ENSBMSG00010013505) ENSBMSG00010013440 SYBU (ENSBMSG00010013336) KCNV1 (ENSBMSG00010013282) ENSBMSG00010013266 ENSBMSG00010013249 CSMD3 (ENSBMSG00010013044) ENSBMSG00010012938 TRPS1 (ENSBMSG00010012894) EIF3H (ENSBMSG00010012850) Suina ANCESTRAL SPECIES 11 ENSGT00940000157873 ENSGT00390000004950 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000016521 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.b ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 944 IL1RAP (ENSCWAG00000021249) TMEM207 (ENSCWAG00000021235) CLDN16 (ENSCWAG00000021225) CLDN1 (ENSCWAG00000021217) P3H2 (ENSCWAG00000021197) TP63 (ENSCWAG00000020115) TPRG1 (ENSCWAG00000020051) LPP (ENSCWAG00000020035) ENSCWAG00000020023 BCL6 (ENSCWAG00000019996) RTP2 (ENSCWAG00000019985) SST (ENSCWAG00000019978) ENSCWAG00000019974 MASP1 (ENSCWAG00000019919) RTP1 (ENSCWAG00000019894) ENSCWAG00000019874 ##22 ST6GAL1 (ENSCWAG00000019858) ADIPOQ (ENSCWAG00000019841) RFC4 (ENSCWAG00000019803) EIF4A2 (ENSCWAG00000019706) ENSCWAG00000019693 ENSCWAG00000019623 HRG (ENSCWAG00000019587) FETUB (ENSCWAG00000019460) AHSG (ENSCWAG00000019351) DNAJB11 (ENSCWAG00000019316) TBCCD1 (ENSCWAG00000019259) CRYGS (ENSCWAG00000019229) DGKG (ENSCWAG00000018790) ETV5 (ENSCWAG00000018630) ENSCWAG00000018593 Chacoan peccary MODERN SPECIES 887 ENSCWAG00000017290 IGFBPL1 (ENSCWAG00000017319) SHB (ENSCWAG00000017358) ENSCWAG00000017382 ENSCWAG00000017396 DCAF10 (ENSCWAG00000017408) EXOSC3 (ENSCWAG00000017435) TRMT10B (ENSCWAG00000017486) FRMPD1 (ENSCWAG00000017603) TOMM5 (ENSCWAG00000017709) FBXO10 (ENSCWAG00000017738) POLR1E (ENSCWAG00000017795) ZBTB5 (ENSCWAG00000017845) GRHPR (ENSCWAG00000017856) ZCCHC7 (ENSCWAG00000017893) ENSCWAG00000017922 ##22 PAX5 (ENSCWAG00000018007) MELK (ENSCWAG00000019429) RNF38 (ENSCWAG00000019537) GNE (ENSCWAG00000019650) CLTA (ENSCWAG00000019777) CCIN (ENSCWAG00000019866) GLIPR2 (ENSCWAG00000019879) RECK (ENSCWAG00000019908) ENSCWAG00000019945 ENSCWAG00000019959 ENSCWAG00000003787 ENSCWAG00000003829 OR2S2 (ENSCWAG00000003839) SPAAR (ENSCWAG00000003846) HRCT1 (ENSCWAG00000003864) Chacoan peccary MODERN SPECIES 204 APC (ENSCWAG00000001027) EPB41L4A (ENSCWAG00000001116) ENSCWAG00000001175 NREP (ENSCWAG00000001185) YTHDC2 (ENSCWAG00000001210) KCNN2 (ENSCWAG00000001266) TRIM36 (ENSCWAG00000001311) PGGT1B (ENSCWAG00000001362) CCDC112 (ENSCWAG00000001398) FEM1C (ENSCWAG00000001501) TICAM2 (ENSCWAG00000001507) TMED7 (ENSCWAG00000001514) ENSCWAG00000001522 CDO1 (ENSCWAG00000001528) ATG12 (ENSCWAG00000001537) ENSCWAG00000001553 ##22 LVRN (ENSCWAG00000001573) ARL14EPL (ENSCWAG00000001599) COMMD10 (ENSCWAG00000001607) SEMA6A (ENSCWAG00000001638) DTWD2 (ENSCWAG00000001734) DMXL1 (ENSCWAG00000001823) TNFAIP8 (ENSCWAG00000001895) HSD17B4 (ENSCWAG00000001921) FAM170A (ENSCWAG00000001952) ENSCWAG00000001965 PRR16 (ENSCWAG00000001973) ENSCWAG00000001983 FTMT (ENSCWAG00000001994) SRFBP1 (ENSCWAG00000002002) LOX (ENSCWAG00000002021) Pig DUPLICATION Pig MODERN SPECIES 10 EPB41L4A (ENSSSCG00000029860) ENSSSCG00000043710 NREP (ENSSSCG00000053658) YTHDC2 (ENSSSCG00000014211) ENSSSCG00000059928 KCNN2 (ENSSSCG00000014213) ENSSSCG00000034179 TRIM36 (ENSSSCG00000014214) PGGT1B (ENSSSCG00000014215) CCDC112 (ENSSSCG00000029866) FEM1C (ENSSSCG00000014217) ENSSSCG00000038141 TMED7 (ENSSSCG00000038156) CDO1 (ENSSSCG00000057522) ATG12 (ENSSSCG00000033912) AP3S1 (ENSSSCG00000037595) ##22 LVRN (ENSSSCG00000014221) ARL14EPL (ENSSSCG00000056110) COMMD10 (ENSSSCG00000014223) SEMA6A (ENSSSCG00000014224) ENSSSCG00000054584 ENSSSCG00000054228 ENSSSCG00000059960 DTWD2 (ENSSSCG00000014225) ENSSSCG00000049689 DMXL1 (ENSSSCG00000027857) TNFAIP8 (ENSSSCG00000040617) HSD17B4 (ENSSSCG00000028431) ENSSSCG00000046515 FAM170A (ENSSSCG00000014228) ENSSSCG00000052759 Pig DUPLICATION Pig MODERN SPECIES 2 FBXL3 (ENSSSCG00000009472) MYCBP2 (ENSSSCG00000009473) SCEL (ENSSSCG00000009474) SLAIN1 (ENSSSCG00000009475) EDNRB (ENSSSCG00000009477) ENSSSCG00000043223 POU4F1 (ENSSSCG00000025334) OBI1 (ENSSSCG00000029113) RBM26 (ENSSSCG00000009479) NDFIP2 (ENSSSCG00000009480) SPRY2 (ENSSSCG00000009482) ENSSSCG00000050522 ENSSSCG00000004054 ENSSSCG00000047723 SLITRK1 (ENSSSCG00000009485) ENSSSCG00000035248 ##22 SLITRK6 (ENSSSCG00000009486) ENSSSCG00000033995 ENSSSCG00000047038 SLITRK5 (ENSSSCG00000009488) GPC5 (ENSSSCG00000031946) GPC6 (ENSSSCG00000009489) DCT (ENSSSCG00000009490) TGDS (ENSSSCG00000009491) GPR180 (ENSSSCG00000009492) SOX21 (ENSSSCG00000009494) ENSSSCG00000026996 ENSSSCG00000009497 ENSSSCG00000052892 ENSSSCG00000009496 ENSSSCG00000052971 Pig MODERN SPECIES 12 TMEM74 (ENSSSCG00000006031) EMC2 (ENSSSCG00000006032) EIF3E (ENSSSCG00000006033) RSPO2 (ENSSSCG00000006034) ANGPT1 (ENSSSCG00000006035) ABRA (ENSSSCG00000031728) OXR1 (ENSSSCG00000006037) ENSSSCG00000054725 ENSSSCG00000054113 ENSSSCG00000044983 ZFPM2 (ENSSSCG00000006038) LRP12 (ENSSSCG00000006039) DPYS (ENSSSCG00000006040) DCSTAMP (ENSSSCG00000006043) RIMS2 (ENSSSCG00000031957) ENSSSCG00000051099 ##22 DCAF13 (ENSSSCG00000006048) SLC25A32 (ENSSSCG00000006049) ENSSSCG00000049578 CTHRC1 (ENSSSCG00000006051) FZD6 (ENSSSCG00000006052) ENSSSCG00000056544 BAALC (ENSSSCG00000059124) ATP6V1C1 (ENSSSCG00000006054) AZIN1 (ENSSSCG00000023873) KLF10 (ENSSSCG00000027480) ODF1 (ENSSSCG00000006056) UBR5 (ENSSSCG00000022479) RRM2B (ENSSSCG00000036139) NCALD (ENSSSCG00000006059) ENSSSCG00000050468 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 Primates DUPLICATION Primates DUPLICATION Primates ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Hominoidea ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Hominidae ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.a ##22 Pan ANCESTRAL SPECIES 7 ENSGT00390000013266.b ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ENSGT00950000182965.a.b.b.b.g.b.a.a ENSGT00940000160772 ENSGT00860000136092 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00970000193421.C.a.vb.a ##22 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000010063.o.b ENSGT00940000154256.l.a ENSGT00390000014876.o.a ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00940000164328 ENSGT00940000157188 ENSGT00940000160623 ENSGT00940000157828 Bonobo MODERN SPECIES 17 ENSPPAG00000034639 ADAM29 (ENSPPAG00000014578) GLRA3 (ENSPPAG00000036427) HPGD (ENSPPAG00000040053) CEP44 (ENSPPAG00000031462) FBXO8 (ENSPPAG00000035822) ENSPPAG00000026731 ENSPPAG00000010368 ENSPPAG00000017140 ENSPPAG00000012097 ENSPPAG00000006019 SCRG1 (ENSPPAG00000036840) ENSPPAG00000034405 HMGB2 (ENSPPAG00000043994) GALNT7 (ENSPPAG00000034268) ENSPPAG00000002018 ##22 ENSPPAG00000027655 GALNTL6 (ENSPPAG00000003147) AADAT (ENSPPAG00000041158) MFAP3L (ENSPPAG00000041103) ENSPPAG00000041549 ENSPPAG00000041291 HPF1 (ENSPPAG00000000046) CLCN3 (ENSPPAG00000042101) NEK1 (ENSPPAG00000018386) SH3RF1 (ENSPPAG00000034156) CBR4 (ENSPPAG00000037448) ENSPPAG00000027926 ENSPPAG00000042740 DDX60L (ENSPPAG00000014553) ENSPPAG00000040254 Chimpanzee MODERN SPECIES 17 GPM6A (ENSPTRG00000016609) ENSPTRG00000050820 ADAM29 (ENSPTRG00000016608) GLRA3 (ENSPTRG00000016607) HPGD (ENSPTRG00000016606) CEP44 (ENSPTRG00000016605) FBXO8 (ENSPTRG00000016604) ENSPTRG00000046852 ENSPTRG00000045495 HAND2 (ENSPTRG00000016601) ENSPTRG00000046676 SCRG1 (ENSPTRG00000016599) SAP30 (ENSPTRG00000016598) HMGB2 (ENSPTRG00000016597) GALNT7 (ENSPTRG00000016596) ENSPTRG00000051120 ##22 ENSPTRG00000047261 GALNTL6 (ENSPTRG00000016595) AADAT (ENSPTRG00000016592) MFAP3L (ENSPTRG00000016591) ENSPTRG00000051995 ENSPTRG00000051762 HPF1 (ENSPTRG00000016590) CLCN3 (ENSPTRG00000016589) NEK1 (ENSPTRG00000016588) SH3RF1 (ENSPTRG00000016587) CBR4 (ENSPTRG00000016585) ENSPTRG00000046885 PALLD (ENSPTRG00000016583) DDX60L (ENSPTRG00000016582) DDX60 (ENSPTRG00000016581) Primates ANCESTRAL SPECIES 8 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00910000148135 ENSGT00970000193421.C.a.vb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Haplorrhini ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Vervet Monkey MODERN SPECIES 15 REEP5 (ENSCSAG00000014928) DCP2 (ENSCSAG00000014920) MCC (ENSCSAG00000014911) TSSK1B (ENSCSAG00000000514) YTHDC2 (ENSCSAG00000014899) KCNN2 (ENSCSAG00000014883) ENSCSAG00000000513 TRIM36 (ENSCSAG00000014876) PGGT1B (ENSCSAG00000014868) CCDC112 (ENSCSAG00000014858) FEM1C (ENSCSAG00000014851) TICAM2 (ENSCSAG00000000512) TMED7 (ENSCSAG00000014844) CDO1 (ENSCSAG00000014838) ATG12 (ENSCSAG00000014836) AP3S1 (ENSCSAG00000014829) ##22 ENSCSAG00000014823 LVRN (ENSCSAG00000014807) ARL14EPL (ENSCSAG00000014770) COMMD10 (ENSCSAG00000014765) SEMA6A (ENSCSAG00000014749) DTWD2 (ENSCSAG00000014686) DMXL1 (ENSCSAG00000014679) TNFAIP8 (ENSCSAG00000014662) HSD17B4 (ENSCSAG00000014659) FAM170A (ENSCSAG00000014643) PRR16 (ENSCSAG00000000511) FTMT (ENSCSAG00000000510) SRFBP1 (ENSCSAG00000014636) LOX (ENSCSAG00000014633) ZNF474 (ENSCSAG00000000509) Hominoidea ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Pan ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Chimpanzee MODERN SPECIES 7 ENSPTRG00000046001 EXOSC6 (ENSPTRG00000008296) AARS1 (ENSPTRG00000008297) DDX19B (ENSPTRG00000008298) ENSPTRG00000045644 ENSPTRG00000008301 ENSPTRG00000046184 ST3GAL2 (ENSPTRG00000052488) FCSK (ENSPTRG00000008303) COG4 (ENSPTRG00000008304) SF3B3 (ENSPTRG00000008308) IL34 (ENSPTRG00000008309) MTSS2 (ENSPTRG00000008310) VAC14 (ENSPTRG00000008313) HYDIN (ENSPTRG00000008315) ENSPTRG00000050692 ##22 CALB2 (ENSPTRG00000008320) TLE7 (ENSPTRG00000045587) ZNF23 (ENSPTRG00000008321) ZNF19 (ENSPTRG00000008322) CHST4 (ENSPTRG00000008323) TAT (ENSPTRG00000008324) MARVELD3 (ENSPTRG00000008325) PHLPP2 (ENSPTRG00000008326) ENSPTRG00000052600 AP1G1 (ENSPTRG00000008327) ATXN1L (ENSPTRG00000039075) ZNF821 (ENSPTRG00000008328) IST1 (ENSPTRG00000051566) PKD1L3 (ENSPTRG00000051796) ENSPTRG00000048929 Strepsirrhini ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00970000193421.C.a.vb.b ##22 Coquerels sifaka MODERN SPECIES 569 ENSPCOG00000020091 ##22 ENSPCOG00000019451 Primates ANCESTRAL SPECIES 8 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00910000148135 ENSGT00970000193421.C.a.vb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Bushbaby MODERN SPECIES 145 REEP5 (ENSOGAG00000008581) DCP2 (ENSOGAG00000008583) MCC (ENSOGAG00000008585) ENSOGAG00000027996 YTHDC2 (ENSOGAG00000001618) KCNN2 (ENSOGAG00000009146) TRIM36 (ENSOGAG00000015684) PGGT1B (ENSOGAG00000015691) CCDC112 (ENSOGAG00000015696) FEM1C (ENSOGAG00000002118) ENSOGAG00000002119 TMED7 (ENSOGAG00000027826) ENSOGAG00000024748 CDO1 (ENSOGAG00000009306) ATG12 (ENSOGAG00000009309) AP3S1 (ENSOGAG00000032376) ##22 ENSOGAG00000032641 LVRN (ENSOGAG00000009319) COMMD10 (ENSOGAG00000000481) ENSOGAG00000033988 SEMA6A (ENSOGAG00000004297) DTWD2 (ENSOGAG00000002419) DMXL1 (ENSOGAG00000013715) TNFAIP8 (ENSOGAG00000002903) HSD17B4 (ENSOGAG00000002904) FAM170A (ENSOGAG00000008756) PRR16 (ENSOGAG00000001231) ENSOGAG00000027562 Lemuriformes ANCESTRAL SPECIES 54 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 3 MCC (ENSMICG00000013807) YTHDC2 (ENSMICG00000004030) KCNN2 (ENSMICG00000002012) TRIM36 (ENSMICG00000015099) PGGT1B (ENSMICG00000010176) CCDC112 (ENSMICG00000010180) FEM1C (ENSMICG00000046595) ENSMICG00000046287 ENSMICG00000044216 ENSMICG00000043716 ENSMICG00000045147 TMED7 (ENSMICG00000028228) ENSMICG00000009536 CDO1 (ENSMICG00000047296) ATG12 (ENSMICG00000009010) AP3S1 (ENSMICG00000032412) ##22 ENSMICG00000033754 ENSMICG00000043714 LVRN (ENSMICG00000006167) ARL14EPL (ENSMICG00000033608) ENSMICG00000006173 SEMA6A (ENSMICG00000001450) ENSMICG00000032970 CCL28 (ENSMICG00000045487) HMGCS1 (ENSMICG00000001372) NIM1K (ENSMICG00000009901) ZNF131 (ENSMICG00000042242) ENSMICG00000032618 ENSMICG00000033829 DTWD2 (ENSMICG00000033817) ENSMICG00000042755 Mouse lemur MODERN SPECIES 169 ENSMICG00000042840 ENSMICG00000042555 ENSMICG00000032834 DMD (ENSMICG00000028112) ENSMICG00000047999 TAB3 (ENSMICG00000032994) ENSMICG00000031852 ENSMICG00000005238 ENSMICG00000034710 NR0B1 (ENSMICG00000047871) ENSMICG00000032961 ENSMICG00000013694 IL1RAPL1 (ENSMICG00000009756) ENSMICG00000043208 ENSMICG00000036346 ENSMICG00000030568 ##22 ENSMICG00000029119 ARX (ENSMICG00000044540) POLA1 (ENSMICG00000002524) PCYT1B (ENSMICG00000009068) PDK3 (ENSMICG00000009061) ENSMICG00000009517 EIF2S3B (ENSMICG00000017858) KLHL15 (ENSMICG00000038607) CXorf58 (ENSMICG00000036290) ENSMICG00000010756 SAT1 (ENSMICG00000028733) ACOT9 (ENSMICG00000003532) PRDX4 (ENSMICG00000031550) PTCHD1 (ENSMICG00000000824) PHEX (ENSMICG00000000193) Lemuriformes_a ANCESTRAL SPECIES 84 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B.e ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 589 ENSPSMG00000018154 ENSPSMG00000018163 ENSPSMG00000018164 ENSPSMG00000018174 ENSPSMG00000018181 ##22 Greater bamboo lemur MODERN SPECIES 296 ENSPSMG00000007253 ##22 LVRN (ENSPSMG00000007314) ARL14EPL (ENSPSMG00000007323) COMMD10 (ENSPSMG00000007338) SEMA6A (ENSPSMG00000007461) ENSPSMG00000007495 ADAMTS5 (ENSPSMG00000007499) ADAMTS1 (ENSPSMG00000007521) CYYR1 (ENSPSMG00000007543) ENSPSMG00000007551 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 776 APC (ENSPCOG00000027099) SRP19 (ENSPCOG00000023239) REEP5 (ENSPCOG00000023768) DCP2 (ENSPCOG00000021762) MCC (ENSPCOG00000015372) YTHDC2 (ENSPCOG00000017526) KCNN2 (ENSPCOG00000026190) TRIM36 (ENSPCOG00000020479) PGGT1B (ENSPCOG00000024035) ENSPCOG00000021392 FEM1C (ENSPCOG00000021122) TMED7 (ENSPCOG00000020779) ENSPCOG00000017131 CDO1 (ENSPCOG00000024339) ATG12 (ENSPCOG00000027970) ENSPCOG00000011324 ##22 ENSPCOG00000023442 LVRN (ENSPCOG00000028813) ARL14EPL (ENSPCOG00000017647) COMMD10 (ENSPCOG00000014701) SEMA6A (ENSPCOG00000027566) ENSPCOG00000023661 DMXL1 (ENSPCOG00000002445) TNFAIP8 (ENSPCOG00000026671) HSD17B4 (ENSPCOG00000028688) FAM170A (ENSPCOG00000026000) PRR16 (ENSPCOG00000019834) Coquerels sifaka MODERN SPECIES 483 ENSPCOG00000007253 ENSPCOG00000002108 ##22 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Tarsier DUPLICATION Tarsier MODERN SPECIES 5600 ENSTSYG00000028755 ENSTSYG00000030161 ##22 TACR1 (ENSTSYG00000034935) Tarsier MODERN SPECIES 6951 CDO1 (ENSTSYG00000029458) ATG12 (ENSTSYG00000013229) AP3S1 (ENSTSYG00000013231) ##22 Tarsier MODERN SPECIES 6135 CUNH5orf63 (ENSTSYG00000033156) MARCH3 (ENSTSYG00000000591) LMNB1 (ENSTSYG00000005110) ENSTSYG00000033923 ##22 ENSTSYG00000014551 TEX43 (ENSTSYG00000026427) PHAX (ENSTSYG00000008838) Tarsier MODERN SPECIES 6917 ENSTSYG00000033658 ENSTSYG00000006655 CCNT2 (ENSTSYG00000005142) ACMSD (ENSTSYG00000000188) ENSTSYG00000036634 ##22 Simiiformes ANCESTRAL SPECIES 6 ENSGT00390000004950.k.b ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Catarrhini ANCESTRAL SPECIES 7 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000006867.e.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 Rhinopithecus ANCESTRAL SPECIES 367 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000703.g.a.c.a Golden snub-nosed monkey MODERN SPECIES 2757 CDO1 (ENSRROG00000015500) ATG12 (ENSRROG00000044328) AP3S1 (ENSRROG00000010220) ##22 LVRN (ENSRROG00000036892) ARL14EPL (ENSRROG00000006516) COMMD10 (ENSRROG00000006609) Black snub-nosed monkey MODERN SPECIES 936 ENSRBIG00000032138 FEM1C (ENSRBIG00000033173) TICAM2 (ENSRBIG00000001979) TMED7 (ENSRBIG00000039395) CDO1 (ENSRBIG00000042118) ATG12 (ENSRBIG00000040364) AP3S1 (ENSRBIG00000036901) ##22 LVRN (ENSRBIG00000037405) ARL14EPL (ENSRBIG00000021578) COMMD10 (ENSRBIG00000037604) SEMA6A (ENSRBIG00000043931) ENSRBIG00000041527 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00390000004950.k.b ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000006867.e.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000170110 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00940000167922 ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000170110 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00940000167922 ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00910000147144 ENSGT00390000006867.e.a ENSGT00910000147427 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 Olive baboon MODERN SPECIES 15 ENSPANG00000003025 DCP2 (ENSPANG00000007042) MCC (ENSPANG00000020012) YTHDC2 (ENSPANG00000024470) KCNN2 (ENSPANG00000002292) ENSPANG00000050729 ENSPANG00000044505 TRIM36 (ENSPANG00000012019) PGGT1B (ENSPANG00000019840) CCDC112 (ENSPANG00000011685) FEM1C (ENSPANG00000007270) TICAM2 (ENSPANG00000019435) TMED7 (ENSPANG00000043917) CDO1 (ENSPANG00000010660) ATG12 (ENSPANG00000031905) AP3S1 (ENSPANG00000031545) ##22 LVRN (ENSPANG00000020424) ARL14EPL (ENSPANG00000006470) COMMD10 (ENSPANG00000011684) SEMA6A (ENSPANG00000003800) ENSPANG00000035421 ENSPANG00000042780 ENSPANG00000011932 ENSPANG00000042107 DMXL1 (ENSPANG00000011300) TNFAIP8 (ENSPANG00000035840) HSD17B4 (ENSPANG00000011683) FAM170A (ENSPANG00000008126) ENSPANG00000042421 PRR16 (ENSPANG00000030898) FTMT (ENSPANG00000042351) Cercopithecinae_d ANCESTRAL SPECIES 139 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000170110 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00940000167922 ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00910000147144 ENSGT00550000076451.a.b.b ENSGT00390000006867.e.a ENSGT00390000003094 ENSGT00910000147427 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a Drill MODERN SPECIES 348 CDO1 (ENSMLEG00000043482) ATG12 (ENSMLEG00000030977) AP3S1 (ENSMLEG00000031962) ##22 LVRN (ENSMLEG00000031675) ARL14EPL (ENSMLEG00000035222) COMMD10 (ENSMLEG00000008377) ENSMLEG00000009159 SEMA6A (ENSMLEG00000042943) ENSMLEG00000027959 ENSMLEG00000029452 ENSMLEG00000040708 ENSMLEG00000039425 ENSMLEG00000033527 DMXL1 (ENSMLEG00000034133) TNFAIP8 (ENSMLEG00000035148) HSD17B4 (ENSMLEG00000024455) FAM170A (ENSMLEG00000034261) ENSMLEG00000006416 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 226 CD5L (ENSCATG00000039371) FCRL1 (ENSCATG00000003184) FCRL2 (ENSCATG00000042374) FCRL3 (ENSCATG00000034420) FCRL4 (ENSCATG00000044056) FCRL5 (ENSCATG00000011238) ETV3 (ENSCATG00000030900) ETV3L (ENSCATG00000043675) ARHGEF11 (ENSCATG00000031576) LRRC71 (ENSCATG00000010667) PEAR1 (ENSCATG00000041895) INSRR (ENSCATG00000029393) NTRK1 (ENSCATG00000043708) SH2D2A (ENSCATG00000022075) ENSCATG00000040705 ##22 PRCC (ENSCATG00000030448) HDGF (ENSCATG00000037963) MRPL24 (ENSCATG00000041063) METTL25B (ENSCATG00000039574) ENSCATG00000005308 ENSCATG00000003077 CRABP2 (ENSCATG00000033604) NES (ENSCATG00000032199) BCAN (ENSCATG00000012408) HAPLN2 (ENSCATG00000029760) ENSCATG00000010253 GPATCH4 (ENSCATG00000042152) NAXE (ENSCATG00000040211) TTC24 (ENSCATG00000034529) IQGAP3 (ENSCATG00000007614) Sooty mangabey MODERN SPECIES 162 DCP2 (ENSCATG00000000044) MCC (ENSCATG00000042573) YTHDC2 (ENSCATG00000031670) KCNN2 (ENSCATG00000029944) ENSCATG00000040740 TRIM36 (ENSCATG00000029519) PGGT1B (ENSCATG00000043964) CCDC112 (ENSCATG00000005310) ENSCATG00000044670 ENSCATG00000015766 FEM1C (ENSCATG00000041880) TICAM2 (ENSCATG00000023132) TMED7 (ENSCATG00000002412) CDO1 (ENSCATG00000032243) ATG12 (ENSCATG00000042479) AP3S1 (ENSCATG00000031530) ##22 LVRN (ENSCATG00000039779) ARL14EPL (ENSCATG00000036338) COMMD10 (ENSCATG00000035056) SEMA6A (ENSCATG00000037797) ENSCATG00000016765 ENSCATG00000032242 ENSCATG00000014099 ENSCATG00000014506 ENSCATG00000038861 ENSCATG00000034053 DMXL1 (ENSCATG00000035576) TNFAIP8 (ENSCATG00000029947) HSD17B4 (ENSCATG00000030740) FAM170A (ENSCATG00000031886) ENSCATG00000043359 Macaca ANCESTRAL SPECIES 7 ENSGT00940000171015 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000170110 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT01030000234543.A.b.db.b ENSGT00940000167922 ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867.e.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Pig-tailed macaque MODERN SPECIES 295 MCC (ENSMNEG00000032880) ENSMNEG00000041669 YTHDC2 (ENSMNEG00000040900) KCNN2 (ENSMNEG00000000038) ENSMNEG00000031429 TRIM36 (ENSMNEG00000013883) PGGT1B (ENSMNEG00000034399) CCDC112 (ENSMNEG00000018182) ENSMNEG00000042209 ENSMNEG00000037336 FEM1C (ENSMNEG00000031107) TICAM2 (ENSMNEG00000023039) TMED7 (ENSMNEG00000030735) CDO1 (ENSMNEG00000029765) ATG12 (ENSMNEG00000033384) AP3S1 (ENSMNEG00000041482) ##22 LVRN (ENSMNEG00000002752) ARL14EPL (ENSMNEG00000044534) COMMD10 (ENSMNEG00000029366) SEMA6A (ENSMNEG00000032788) ENSMNEG00000003964 ENSMNEG00000029584 ENSMNEG00000013855 DMXL1 (ENSMNEG00000030191) TNFAIP8 (ENSMNEG00000017401) HSD17B4 (ENSMNEG00000034446) FAM170A (ENSMNEG00000038508) ENSMNEG00000043297 ENSMNEG00000043573 PRR16 (ENSMNEG00000042635) SRFBP1 (ENSMNEG00000040870) Macaca_a ANCESTRAL SPECIES 8 ENSGT00530000063749.c.b ENSGT00950000183152.A.q.b ENSGT00940000157873 ENSGT00390000018878 ENSGT00940000171015 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867.e.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Crab-eating macaque MODERN SPECIES 16 ENSMFAG00000057984 MCC (ENSMFAG00000033351) YTHDC2 (ENSMFAG00000033417) KCNN2 (ENSMFAG00000034607) ENSMFAG00000049761 ENSMFAG00000056061 TRIM36 (ENSMFAG00000045553) PGGT1B (ENSMFAG00000046396) CCDC112 (ENSMFAG00000030969) FEM1C (ENSMFAG00000046066) TICAM2 (ENSMFAG00000019091) ENSMFAG00000062684 CDO1 (ENSMFAG00000032046) ATG12 (ENSMFAG00000060418) ENSMFAG00000054906 AP3S1 (ENSMFAG00000003364) ##22 LVRN (ENSMFAG00000044364) ARL14EPL (ENSMFAG00000062567) ENSMFAG00000002006 COMMD10 (ENSMFAG00000002934) SEMA6A (ENSMFAG00000041392) ENSMFAG00000064745 ENSMFAG00000057613 ENSMFAG00000056945 ENSMFAG00000043561 DMXL1 (ENSMFAG00000040275) TNFAIP8 (ENSMFAG00000042688) HSD17B4 (ENSMFAG00000039507) ENSMFAG00000002111 PRR16 (ENSMFAG00000003359) SRFBP1 (ENSMFAG00000031263) Rhesus MODERN SPECIES 16 ENSMMUG00000042951 REEP5 (ENSMMUG00000020488) DCP2 (ENSMMUG00000013553) ENSMMUG00000053263 MCC (ENSMMUG00000013557) YTHDC2 (ENSMMUG00000001376) KCNN2 (ENSMMUG00000020502) ENSMMUG00000055101 TRIM36 (ENSMMUG00000011130) PGGT1B (ENSMMUG00000005018) CCDC112 (ENSMMUG00000005023) FEM1C (ENSMMUG00000053101) TICAM2 (ENSMMUG00000015114) CDO1 (ENSMMUG00000061758) ATG12 (ENSMMUG00000060812) AP3S1 (ENSMMUG00000015288) ##22 ENSMMUG00000056057 LVRN (ENSMMUG00000022191) ENSMMUG00000022192 ARL14EPL (ENSMMUG00000056563) COMMD10 (ENSMMUG00000008738) SEMA6A (ENSMMUG00000012265) DTWD2 (ENSMMUG00000008302) DMXL1 (ENSMMUG00000018640) HSD17B4 (ENSMMUG00000017685) ENSMMUG00000059145 ENSMMUG00000018764 ENSMMUG00000063354 PRR16 (ENSMMUG00000038727) FTMT (ENSMMUG00000051455) SRFBP1 (ENSMMUG00000021009) Hominoidea ANCESTRAL SPECIES 8 ENSGT00950000183152.A.q.b ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Gibbon MODERN SPECIES 11 REEP5 (ENSNLEG00000011580) ENSNLEG00000018892 DCP2 (ENSNLEG00000011594) MCC (ENSNLEG00000011620) YTHDC2 (ENSNLEG00000011648) KCNN2 (ENSNLEG00000011697) TRIM36 (ENSNLEG00000011724) PGGT1B (ENSNLEG00000011737) CCDC112 (ENSNLEG00000011753) ENSNLEG00000034911 FEM1C (ENSNLEG00000011770) TICAM2 (ENSNLEG00000011774) ENSNLEG00000034479 CDO1 (ENSNLEG00000027852) ENSNLEG00000031512 AP3S1 (ENSNLEG00000027249) ##22 LVRN (ENSNLEG00000034383) ARL14EPL (ENSNLEG00000035776) COMMD10 (ENSNLEG00000026562) ENSNLEG00000033349 SEMA6A (ENSNLEG00000011779) ENSNLEG00000035368 ENSNLEG00000031042 ENSNLEG00000030536 DTWD2 (ENSNLEG00000011825) DMXL1 (ENSNLEG00000011838) TNFAIP8 (ENSNLEG00000011925) HSD17B4 (ENSNLEG00000011926) FAM170A (ENSNLEG00000011943) ENSNLEG00000034199 PRR16 (ENSNLEG00000011947) Hominidae ANCESTRAL SPECIES 7 ENSGT00950000183152.A.q.b ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Orangutan MODERN SPECIES 18 APC (ENSPPYG00000015685) SRP19 (ENSPPYG00000029584) REEP5 (ENSPPYG00000015687) DCP2 (ENSPPYG00000034997) MCC (ENSPPYG00000015689) YTHDC2 (ENSPPYG00000015691) KCNN2 (ENSPPYG00000015692) TRIM36 (ENSPPYG00000015693) PGGT1B (ENSPPYG00000039438) CCDC112 (ENSPPYG00000015695) FEM1C (ENSPPYG00000015696) TMED7 (ENSPPYG00000015697) TICAM2 (ENSPPYG00000040843) CDO1 (ENSPPYG00000015698) ATG12 (ENSPPYG00000015699) ENSPPYG00000036581 ##22 LVRN (ENSPPYG00000015702) ARL14EPL (ENSPPYG00000038124) ENSPPYG00000033699 COMMD10 (ENSPPYG00000015703) ENSPPYG00000015704 SEMA6A (ENSPPYG00000015705) DTWD2 (ENSPPYG00000015707) DMXL1 (ENSPPYG00000015708) TNFAIP8 (ENSPPYG00000015709) HSD17B4 (ENSPPYG00000015710) FAM170A (ENSPPYG00000015711) PRR16 (ENSPPYG00000015712) FTMT (ENSPPYG00000015713) SRFBP1 (ENSPPYG00000015714) LOX (ENSPPYG00000015715) Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00950000183152.A.q.b ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654.g ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00950000183152.A.q.b ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654.g ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Human MODERN SPECIES 17 REEP5 (ENSG00000129625) DCP2 (ENSG00000172795) MCC (ENSG00000171444) TSSK1B (ENSG00000212122) YTHDC2 (ENSG00000047188) KCNN2 (ENSG00000080709) TRIM36 (ENSG00000152503) PGGT1B (ENSG00000164219) CCDC112 (ENSG00000164221) FEM1C (ENSG00000145780) TICAM2 (ENSG00000243414) TMED7-TICAM2 (ENSG00000251201) TMED7 (ENSG00000134970) CDO1 (ENSG00000129596) ATG12 (ENSG00000145782) AP3S1 (ENSG00000177879) ##22 LVRN (ENSG00000172901) ARL14EPL (ENSG00000268223) COMMD10 (ENSG00000145781) SEMA6A (ENSG00000092421) DTWD2 (ENSG00000169570) DMXL1 (ENSG00000172869) TNFAIP8 (ENSG00000145779) HSD17B4 (ENSG00000133835) FAM170A (ENSG00000164334) PRR16 (ENSG00000184838) FTMT (ENSG00000181867) SRFBP1 (ENSG00000151304) LOX (ENSG00000113083) ZNF474 (ENSG00000164185) ENSG00000250803 Pan ANCESTRAL SPECIES 10 ENSGT00940000157873 ENSGT00950000183152.A.q.b ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00550000074988.u.a ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654.g ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT01100000264604 ENSGT00940000156565 ENSGT00390000000703.h ENSGT00390000006548.b.j.a.d ENSGT00390000006867.e.b ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000000603.a ENSGT00910000144204.a ENSGT00940000163120 Bonobo MODERN SPECIES 18 ENSPPAG00000008683 DCP2 (ENSPPAG00000042108) MCC (ENSPPAG00000001501) YTHDC2 (ENSPPAG00000018854) ENSPPAG00000012064 KCNN2 (ENSPPAG00000043586) TRIM36 (ENSPPAG00000038087) PGGT1B (ENSPPAG00000040814) CCDC112 (ENSPPAG00000043596) ENSPPAG00000036727 FEM1C (ENSPPAG00000039455) TICAM2 (ENSPPAG00000003139) TMED7 (ENSPPAG00000028777) CDO1 (ENSPPAG00000043076) ENSPPAG00000037112 AP3S1 (ENSPPAG00000035838) ##22 LVRN (ENSPPAG00000036731) ARL14EPL (ENSPPAG00000027194) ENSPPAG00000009190 COMMD10 (ENSPPAG00000032281) ENSPPAG00000042989 SEMA6A (ENSPPAG00000031930) ENSPPAG00000032638 ENSPPAG00000036724 DTWD2 (ENSPPAG00000032613) DMXL1 (ENSPPAG00000034761) TNFAIP8 (ENSPPAG00000040250) HSD17B4 (ENSPPAG00000041825) FAM170A (ENSPPAG00000035991) ENSPPAG00000028133 PRR16 (ENSPPAG00000026111) Chimpanzee MODERN SPECIES 18 SRP19 (ENSPTRG00000017136) REEP5 (ENSPTRG00000017137) ENSPTRG00000017138 DCP2 (ENSPTRG00000050185) MCC (ENSPTRG00000017140) YTHDC2 (ENSPTRG00000017143) KCNN2 (ENSPTRG00000017144) TRIM36 (ENSPTRG00000017145) PGGT1B (ENSPTRG00000017146) CCDC112 (ENSPTRG00000017147) FEM1C (ENSPTRG00000017150) TICAM2 (ENSPTRG00000049062) TMED7 (ENSPTRG00000017152) CDO1 (ENSPTRG00000017153) ATG12 (ENSPTRG00000017154) AP3S1 (ENSPTRG00000017155) ##22 LVRN (ENSPTRG00000017157) ARL14EPL (ENSPTRG00000044189) ENSPTRG00000047667 COMMD10 (ENSPTRG00000017159) ENSPTRG00000045275 SEMA6A (ENSPTRG00000017162) ENSPTRG00000048147 ENSPTRG00000050380 ENSPTRG00000052390 DTWD2 (ENSPTRG00000017164) ENSPTRG00000052506 DMXL1 (ENSPTRG00000017166) TNFAIP8 (ENSPTRG00000017167) HSD17B4 (ENSPTRG00000017168) FAM170A (ENSPTRG00000017169) Gorilla DUPLICATION Gorilla MODERN SPECIES BPNT1 (ENSGGOG00000022921) EPRS1 (ENSGGOG00000012404) SLC30A10 (ENSGGOG00000009511) ENSGGOG00000008911 LYPLAL1 (ENSGGOG00000001773) TGFB2 (ENSGGOG00000004593) RRP15 (ENSGGOG00000016603) KCTD3 (ENSGGOG00000001811) SPATA17 (ENSGGOG00000009448) GPATCH2 (ENSGGOG00000009440) ESRRG (ENSGGOG00000010263) USH2A (ENSGGOG00000009561) ENSGGOG00000040219 KCNK2 (ENSGGOG00000022229) CENPF (ENSGGOG00000002373) ENSGGOG00000036819 ##22 PTPN14 (ENSGGOG00000000957) SMYD2 (ENSGGOG00000005698) PROX1 (ENSGGOG00000015130) RPS6KC1 (ENSGGOG00000002154) ANGEL2 (ENSGGOG00000009560) VASH2 (ENSGGOG00000004494) FLVCR1 (ENSGGOG00000001738) SPATA45 (ENSGGOG00000037749) TATDN3 (ENSGGOG00000027473) NSL1 (ENSGGOG00000003473) BATF3 (ENSGGOG00000042619) GARIN4 (ENSGGOG00000002765) ATF3 (ENSGGOG00000014206) NENF (ENSGGOG00000025197) PACC1 (ENSGGOG00000008925) Gorilla MODERN SPECIES 18 ENSGGOG00000027482 REEP5 (ENSGGOG00000037456) DCP2 (ENSGGOG00000014412) MCC (ENSGGOG00000001631) YTHDC2 (ENSGGOG00000014407) ENSGGOG00000015564 ENSGGOG00000039744 TRIM36 (ENSGGOG00000016765) PGGT1B (ENSGGOG00000001117) CCDC112 (ENSGGOG00000001120) ENSGGOG00000014116 FEM1C (ENSGGOG00000007224) TICAM2 (ENSGGOG00000028318) CDO1 (ENSGGOG00000016315) ENSGGOG00000041345 AP3S1 (ENSGGOG00000016895) ##22 LVRN (ENSGGOG00000007311) ARL14EPL (ENSGGOG00000022597) COMMD10 (ENSGGOG00000007326) ENSGGOG00000041175 SEMA6A (ENSGGOG00000023232) ENSGGOG00000041499 ENSGGOG00000006258 FBXO28 (ENSGGOG00000040232) DTWD2 (ENSGGOG00000009599) ENSGGOG00000041810 DMXL1 (ENSGGOG00000016805) TNFAIP8 (ENSGGOG00000002982) HSD17B4 (ENSGGOG00000002010) FAM170A (ENSGGOG00000009985) ENSGGOG00000027672 Platyrrhini ANCESTRAL SPECIES 7 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A.h ENSGT00940000153988.B ENSGT01030000234543.A.b.cb ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00940000155572.i.a ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00910000147144 ENSGT01100000263498.b.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00390000006478.e ENSGT00940000154779.a.b.a ENSGT00940000164652 Cebidae ANCESTRAL SPECIES 6 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A.h ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00940000155572.i.a ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00910000147144 ENSGT01100000263498.b.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00390000006478.e ENSGT00940000154779.a.b.a ENSGT00940000164652 Marmoset MODERN SPECIES 11 ENSCJAG00000086758 YTHDC2 (ENSCJAG00000016598) KCNN2 (ENSCJAG00000016659) ENSCJAG00000080090 TRIM36 (ENSCJAG00000016675) PGGT1B (ENSCJAG00000016700) CCDC112 (ENSCJAG00000016720) ENSCJAG00000076204 FEM1C (ENSCJAG00000060349) TICAM2 (ENSCJAG00000045923) TMED7 (ENSCJAG00000081352) ENSCJAG00000084232 CDO1 (ENSCJAG00000016752) ATG12 (ENSCJAG00000066192) ENSCJAG00000066483 AP3S1 (ENSCJAG00000016767) ##22 LVRN (ENSCJAG00000016789) ENSCJAG00000069654 ARL14EPL (ENSCJAG00000031693) COMMD10 (ENSCJAG00000048303) SEMA6A (ENSCJAG00000016830) ENSCJAG00000075199 ENSCJAG00000059010 ENSCJAG00000075519 ENSCJAG00000087081 ENSCJAG00000082202 ENSCJAG00000058929 DTWD2 (ENSCJAG00000041866) DMXL1 (ENSCJAG00000016870) TNFAIP8 (ENSCJAG00000017059) ENSCJAG00000075766 Cebidae_a ANCESTRAL SPECIES 3 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000163130 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A.h ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00940000155572.i.a ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.wb ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00910000147144 ENSGT01100000263498.b.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00390000006478.e ENSGT00940000154779.a.b.a ENSGT00940000164652 Bolivian squirrel monkey MODERN SPECIES 43 REEP5 (ENSSBOG00000028078) DCP2 (ENSSBOG00000005894) TSSK1B (ENSSBOG00000021966) MCC (ENSSBOG00000030470) YTHDC2 (ENSSBOG00000023829) KCNN2 (ENSSBOG00000026944) TRIM36 (ENSSBOG00000033807) PGGT1B (ENSSBOG00000032544) CCDC112 (ENSSBOG00000027246) ENSSBOG00000032462 FEM1C (ENSSBOG00000031758) TMED7 (ENSSBOG00000024538) ENSSBOG00000007764 CDO1 (ENSSBOG00000022855) ATG12 (ENSSBOG00000032632) AP3S1 (ENSSBOG00000035721) ##22 LVRN (ENSSBOG00000032192) ARL14EPL (ENSSBOG00000002436) COMMD10 (ENSSBOG00000005006) SEMA6A (ENSSBOG00000031739) ENSSBOG00000022197 DTWD2 (ENSSBOG00000027949) ENSSBOG00000035161 DMXL1 (ENSSBOG00000031925) TNFAIP8 (ENSSBOG00000022853) HSD17B4 (ENSSBOG00000023708) FAM170A (ENSSBOG00000025629) PRR16 (ENSSBOG00000031473) ENSSBOG00000015464 LOX (ENSSBOG00000025774) ZNF474 (ENSSBOG00000021556) Capuchin DUPLICATION Capuchin MODERN SPECIES 183 ENSCCAG00000026506 POMK (ENSCCAG00000031704) ENSCCAG00000024572 ##22 HOOK3 (ENSCCAG00000031025) RNF170 (ENSCCAG00000036315) ENSCCAG00000036435 CHRNA6 (ENSCCAG00000036214) CHRNB3 (ENSCCAG00000038119) SMIM19 (ENSCCAG00000032399) SLC20A2 (ENSCCAG00000033716) VDAC3 (ENSCCAG00000013198) DKK4 (ENSCCAG00000036691) POLB (ENSCCAG00000035136) IKBKB (ENSCCAG00000022765) ENSCCAG00000030347 PLAT (ENSCCAG00000027505) AP3M2 (ENSCCAG00000031792) KAT6A (ENSCCAG00000025932) Capuchin MODERN SPECIES 288 ENSCCAG00000022309 GNPDA2 (ENSCCAG00000033054) GUF1 (ENSCCAG00000025409) FEM1C (ENSCCAG00000031190) TICAM2 (ENSCCAG00000003996) TMED7 (ENSCCAG00000022085) ENSCCAG00000031045 ENSCCAG00000029821 CDO1 (ENSCCAG00000028843) ATG12 (ENSCCAG00000022221) ENSCCAG00000031976 ##22 LVRN (ENSCCAG00000029311) ARL14EPL (ENSCCAG00000021544) COMMD10 (ENSCCAG00000028459) ENSCCAG00000029363 SEMA6A (ENSCCAG00000021111) ENSCCAG00000022129 ENSCCAG00000024875 ENSCCAG00000037275 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 928 TENM1 (ENSANAG00000034279) SH2D1A (ENSANAG00000017592) ENSANAG00000024609 ENSANAG00000021441 STAG2 (ENSANAG00000031862) XIAP (ENSANAG00000025926) ENSANAG00000004172 ##22 ENSANAG00000034037 GRIA3 (ENSANAG00000038407) ENSANAG00000036624 ENSANAG00000022752 ENSANAG00000024009 C1GALT1C1 (ENSANAG00000019504) ENSANAG00000033714 CUL4B (ENSANAG00000037771) LAMP2 (ENSANAG00000022316) ATP1B4 (ENSANAG00000021106) ENSANAG00000020725 TMEM255A (ENSANAG00000028022) ZBTB33 (ENSANAG00000018611) RHOXF1 (ENSANAG00000037677) NKAP (ENSANAG00000038130) Mas night monkey MODERN SPECIES 966 ZSCAN2 (ENSANAG00000023842) ENSANAG00000027003 ENSANAG00000026971 WDR73 (ENSANAG00000023533) NMB (ENSANAG00000025389) SEC11A (ENSANAG00000026730) ENSANAG00000023536 ZNF592 (ENSANAG00000023866) ALPK3 (ENSANAG00000023039) SLC28A1 (ENSANAG00000026896) PDE8A (ENSANAG00000024243) AKAP13 (ENSANAG00000027868) KLHL25 (ENSANAG00000018034) CDO1 (ENSANAG00000025385) ATG12 (ENSANAG00000023055) ENSANAG00000023676 ##22 LVRN (ENSANAG00000027157) ARL14EPL (ENSANAG00000023687) ENSANAG00000023278 ENSANAG00000024151 COMMD10 (ENSANAG00000022465) ENSANAG00000025676 ENSANAG00000026968 SEMA6A (ENSANAG00000025286) ENSANAG00000024194 ENSANAG00000024770 ENSANAG00000026934 ENSANAG00000022169 DMXL1 (ENSANAG00000028002) TNFAIP8 (ENSANAG00000023898) HSD17B4 (ENSANAG00000026074) Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Tree shrew MODERN SPECIES 1273 CDO1 (ENSTBEG00000003937) AP3S1 (ENSTBEG00000004775) ##22 Glires DUPLICATION Glires DUPLICATION Glires ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.a ##22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 1 SRP72 (ENSHGLG00000009791) ARL9 (ENSHGLG00000046973) ENSHGLG00000041011 ENSHGLG00000008232 ENSHGLG00000042197 ENSHGLG00000004295 ENSHGLG00000036836 ENSHGLG00000005916 NOA1 (ENSHGLG00000006204) ENSHGLG00000011712 IGFBP7 (ENSHGLG00000008997) ENSHGLG00000037745 ENSHGLG00000008002 ENSHGLG00000050335 ENSHGLG00000033518 ENSHGLG00000045566 ##22 ENSHGLG00000035797 ENSHGLG00000015819 ENSHGLG00000020813 ENSHGLG00000048842 ENSHGLG00000046668 ENSHGLG00000034735 ENSHGLG00000014081 ENSHGLG00000006990 ENSHGLG00000019964 ENSHGLG00000040178 ENSHGLG00000042667 ENSHGLG00000015721 ENSHGLG00000043724 ENSHGLG00000021126 ENSHGLG00000040781 Naked mole-rat female MODERN SPECIES 21 ENSHGLG00000032262 MEX3D (ENSHGLG00000043689) MBD3 (ENSHGLG00000018023) UQCR11 (ENSHGLG00000042586) TCF3 (ENSHGLG00000006992) ONECUT3 (ENSHGLG00000006096) ATP8B3 (ENSHGLG00000012356) REXO1 (ENSHGLG00000009363) KLF16 (ENSHGLG00000032359) ABHD17A (ENSHGLG00000047885) SCAMP4 (ENSHGLG00000017794) CSNK1G2 (ENSHGLG00000013947) ENSHGLG00000040593 BTBD2 (ENSHGLG00000013706) MKNK2 (ENSHGLG00000045644) ENSHGLG00000040780 ##22 MOB3A (ENSHGLG00000033345) IZUMO4 (ENSHGLG00000045153) AP3D1 (ENSHGLG00000018179) DOT1L (ENSHGLG00000013977) PLEKHJ1 (ENSHGLG00000045017) SF3A2 (ENSHGLG00000015102) AMH (ENSHGLG00000048192) JSRP1 (ENSHGLG00000049914) Oaz1 (ENSHGLG00000013291) PEAK3 (ENSHGLG00000032164) LINGO3 (ENSHGLG00000014777) LSM7 (ENSHGLG00000010587) SPPL2B (ENSHGLG00000008911) TMPRSS9 (ENSHGLG00000006952) TIMM13 (ENSHGLG00000042587) Sciuridae ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.a ##22 Eurasian red squirrel MODERN SPECIES 14 ENSSVLG00005000128 ENSSVLG00005000142 NAF1 (ENSSVLG00005000303) NPY1R (ENSSVLG00005000326) NPY5R (ENSSVLG00005000351) TKTL2 (ENSSVLG00005000366) ENSSVLG00005000429 MARCHF1 (ENSSVLG00005000488) ENSSVLG00005000541 ENSSVLG00005000557 SMIM31 (ENSSVLG00005000575) ENSSVLG00005000594 ENSSVLG00005000615 ENSSVLG00005000633 ENSSVLG00005000652 ENSSVLG00005000666 ##22 ENSSVLG00005000680 TRIM75 (ENSSVLG00005000696) ENSSVLG00005000719 KLHL2 (ENSSVLG00005000822) MSMO1 (ENSSVLG00005000949) CPE (ENSSVLG00005000975) ENSSVLG00005000996 TLL1 (ENSSVLG00005001039) ENSSVLG00005001107 SPOCK3 (ENSSVLG00005001298) ANXA10 (ENSSVLG00005001520) ENSSVLG00005001553 PALLD (ENSSVLG00005001640) ENSSVLG00005001751 ENSSVLG00005001764 Glires ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.b ##22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 2 ENSHGLG00000045309 MBNL2 (ENSHGLG00000000575) ENSHGLG00000035007 OXGR1 (ENSHGLG00000000211) ENSHGLG00000034517 ENSHGLG00000047293 HS6ST3 (ENSHGLG00000003455) UGGT2 (ENSHGLG00000001100) DNAJC3 (ENSHGLG00000003951) DZIP1 (ENSHGLG00000002976) CLDN10 (ENSHGLG00000001257) ENSHGLG00000042681 ENSHGLG00000011718 ENSHGLG00000048406 ENSHGLG00000008312 ENSHGLG00000006878 ##22 ENSHGLG00000034930 GPR180 (ENSHGLG00000002152) TGDS (ENSHGLG00000000360) DCT (ENSHGLG00000001562) ENSHGLG00000040422 ENSHGLG00000039074 ENSHGLG00000035827 GPC6 (ENSHGLG00000001128) GPC5 (ENSHGLG00000000656) ENSHGLG00000046381 ENSHGLG00000001081 ENSHGLG00000001464 ENSHGLG00000020258 ENSHGLG00000039195 ENSHGLG00000037714 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000020535 OR4E1 (ENSHGLG00000020071) ENSHGLG00000002001 ENSHGLG00000047111 ENSHGLG00000045446 OR10G2 (ENSHGLG00000020361) ENSHGLG00000001772 OR10G3 (ENSHGLG00000020251) SALL2 (ENSHGLG00000006009) METTL3 (ENSHGLG00000005321) TOX4 (ENSHGLG00000004570) ENSHGLG00000004071 CHD8 (ENSHGLG00000003559) SUPT16H (ENSHGLG00000003295) RPGRIP1 (ENSHGLG00000006439) ENSHGLG00000039864 ##22 ENSHGLG00000005772 OR5AU1 (ENSHGLG00000020203) ENSHGLG00000034860 TMEM253 (ENSHGLG00000004638) ZNF219 (ENSHGLG00000004299) ARHGEF40 (ENSHGLG00000003796) RNASE7 (ENSHGLG00000048768) RNASE13 (ENSHGLG00000020365) TPPP2 (ENSHGLG00000003260) NDRG2 (ENSHGLG00000003227) SLC39A2 (ENSHGLG00000002511) ENSHGLG00000002249 ENSHGLG00000033338 ENSHGLG00000002133 ENSHGLG00000046330 Lagomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.xb.b ##22 Rabbit MODERN SPECIES 974 ENSOCUG00000027325 ##22 Glires ANCESTRAL SPECIES 7 ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb ##22 ENSGT00940000160535 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 Pika MODERN SPECIES 993 CDO1 (ENSOPRG00000009151) ATG12 (ENSOPRG00000009163) AP3S1 (ENSOPRG00000009176) ##22 Rabbit MODERN SPECIES 14 TRIM36 (ENSOCUG00000017911) PGGT1B (ENSOCUG00000016411) CCDC112 (ENSOCUG00000016425) ENSOCUG00000033216 FEM1C (ENSOCUG00000014323) TICAM2 (ENSOCUG00000027945) TMED7 (ENSOCUG00000010950) ENSOCUG00000026776 CDO1 (ENSOCUG00000000148) ENSOCUG00000021523 ENSOCUG00000039177 ENSOCUG00000009273 ##22 ENSOCUG00000038868 LVRN (ENSOCUG00000003362) ENSOCUG00000005911 SEMA6A (ENSOCUG00000013815) ENSOCUG00000036822 DTWD2 (ENSOCUG00000016146) DMXL1 (ENSOCUG00000000051) ENSOCUG00000010860 HSD17B4 (ENSOCUG00000010866) FAM170A (ENSOCUG00000015818) ENSOCUG00000003977 PRR16 (ENSOCUG00000006501) ENSOCUG00000023996 ENSOCUG00000022384 ENSOCUG00000023850 Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES 7 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00910000148135 ENSGT00970000193421.C.a.yb.a.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00940000164652 Rodentia_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.a ##22 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000045893 GMFB (ENSHGLG00000038303) ENSHGLG00000014302 CDKN3 (ENSHGLG00000014824) BMP4 (ENSHGLG00000010274) ENSHGLG00000033872 ENSHGLG00000011189 ENSHGLG00000050992 DDHD1 (ENSHGLG00000019227) FERMT2 (ENSHGLG00000018139) ENSHGLG00000014618 STYX (ENSHGLG00000009818) PSMC6 (ENSHGLG00000012892) ERO1A (ENSHGLG00000009956) GPR137C (ENSHGLG00000014860) ENSHGLG00000050455 ##22 TXNDC16 (ENSHGLG00000010925) PTGER2 (ENSHGLG00000040443) PTGDR (ENSHGLG00000011361) NID2 (ENSHGLG00000012453) ENSHGLG00000011931 GNG2 (ENSHGLG00000037657) FRMD6 (ENSHGLG00000013454) ENSHGLG00000046758 TMX1 (ENSHGLG00000012700) TRIM9 (ENSHGLG00000011753) PYGL (ENSHGLG00000011923) ABHD12B (ENSHGLG00000017092) NIN (ENSHGLG00000010798) ENSHGLG00000039372 ENSHGLG00000014486 Rodentia_B ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.a ##22 Kangaroo rat MODERN SPECIES 348 Trpc7 (ENSDORG00000011132) Spock1 (ENSDORG00000010027) Klhl3 (ENSDORG00000012667) ENSDORG00000026425 Myot (ENSDORG00000001567) Dcp2 (ENSDORG00000010088) Ythdc2 (ENSDORG00000007057) ENSDORG00000023638 Trim36 (ENSDORG00000016487) Pggt1b (ENSDORG00000005968) Ccdc112 (ENSDORG00000005754) Fem1c (ENSDORG00000011526) ENSDORG00000006617 Tmed7 (ENSDORG00000023164) Atg12 (ENSDORG00000028568) ENSDORG00000000035 ##22 ENSDORG00000006174 Arl14epl (ENSDORG00000024420) Commd10 (ENSDORG00000007316) Sema6a (ENSDORG00000004414) Dtwd2 (ENSDORG00000010807) Dmxl1 (ENSDORG00000001299) Tnfaip8 (ENSDORG00000000605) Hsd17b4 (ENSDORG00000009712) Fam170a (ENSDORG00000009717) ENSDORG00000009554 Rodentia ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Degu MODERN SPECIES 207 DPH6 (ENSODEG00000005057) ENSODEG00000019127 ENSODEG00000019129 ENSODEG00000019112 AQR (ENSODEG00000005246) ENSODEG00000003262 ACTC1 (ENSODEG00000003301) GJD2 (ENSODEG00000003438) ENSODEG00000002868 SCG5 (ENSODEG00000002913) GREM1 (ENSODEG00000002949) FMN1 (ENSODEG00000003746) ENSODEG00000004524 RYR3 (ENSODEG00000005200) AVEN (ENSODEG00000002767) ENSODEG00000002811 ##22 CHRM5 (ENSODEG00000018913) EMC7 (ENSODEG00000002860) ENSODEG00000002876 EMC4 (ENSODEG00000002907) SLC12A6 (ENSODEG00000002972) ENSODEG00000003071 NUTM1 (ENSODEG00000003085) LPCAT4 (ENSODEG00000003106) ENSODEG00000003119 Rodentia_B ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Kangaroo rat MODERN SPECIES 376 Tada1 (ENSDORG00000006823) Ildr2 (ENSDORG00000001145) Mael (ENSDORG00000001149) Gpa33 (ENSDORG00000029392) Dusp27 (ENSDORG00000005388) Pou2f1 (ENSDORG00000011588) Cd247 (ENSDORG00000026345) Creg1 (ENSDORG00000002312) Rcsd1 (ENSDORG00000015873) Mpzl1 (ENSDORG00000015874) Adcy10 (ENSDORG00000015876) Mpc2 (ENSDORG00000015877) ENSDORG00000015878 Gpr161 (ENSDORG00000015879) Tiprl (ENSDORG00000028030) ENSDORG00000027803 ##22 Sft2d2 (ENSDORG00000016037) Myomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.a.b ##22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1001 Itm2a (ENSNGAG00000024161) Gpr174 (ENSNGAG00000012600) ENSNGAG00000020015 P2ry10 (ENSNGAG00000011583) Lpar4 (ENSNGAG00000024167) Rtl3 (ENSNGAG00000002851) Cysltr1 (ENSNGAG00000010412) ENSNGAG00000022530 ENSNGAG00000007438 ENSNGAG00000007200 ENSNGAG00000011781 ENSNGAG00000012711 Atp7a (ENSNGAG00000012201) ENSNGAG00000014750 ENSNGAG00000023001 ##22 ENSNGAG00000012256 Magt1 (ENSNGAG00000022711) Atrx (ENSNGAG00000023904) Fgf16 (ENSNGAG00000021799) ENSNGAG00000011561 Magee1 (ENSNGAG00000010920) Pbdc1 (ENSNGAG00000008887) Zdhhc15 (ENSNGAG00000024298) Uprt (ENSNGAG00000017602) Abcb7 (ENSNGAG00000011455) Upper Galilee mountains blind mole rat MODERN SPECIES 1294 Fer1l6 (ENSNGAG00000012037) Tmem65 (ENSNGAG00000011951) Trmt12 (ENSNGAG00000014548) Rnf139 (ENSNGAG00000013175) ENSNGAG00000018459 Ndufb9 (ENSNGAG00000021409) Mtss1 (ENSNGAG00000023068) ENSNGAG00000011211 Sqle (ENSNGAG00000004521) Washc5 (ENSNGAG00000014059) ENSNGAG00000016935 Trib1 (ENSNGAG00000018466) Lratd2 (ENSNGAG00000019272) ENSNGAG00000020200 ##22 Myc (ENSNGAG00000021358) ENSNGAG00000021762 Cyrib (ENSNGAG00000023089) Asap1 (ENSNGAG00000021518) Adcy8 (ENSNGAG00000002045) Rodentia ANCESTRAL SPECIES 7 ENSGT00940000154808.a.b ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00910000148135 ENSGT00970000193421.C.a.yb.a.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000154808.a.b ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Myomorpha DUPLICATION Myomorpha DUPLICATION Myomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Lesser Egyptian jerboa MODERN SPECIES 45 Nr2c2 (ENSJJAG00000016580) Fgd5 (ENSJJAG00000001082) 4930590J08Rik (ENSJJAG00000010892) Ccdc174 (ENSJJAG00000014232) Kcnn2 (ENSJJAG00000014162) Trim36 (ENSJJAG00000016437) Pggt1b (ENSJJAG00000022637) Ccdc112 (ENSJJAG00000018302) ENSJJAG00000013957 Fem1c (ENSJJAG00000017855) ENSJJAG00000012573 ENSJJAG00000014321 ENSJJAG00000011849 Cdo1 (ENSJJAG00000010804) ENSJJAG00000013169 ENSJJAG00000009764 ##22 Lvrn (ENSJJAG00000022104) Arl14epl (ENSJJAG00000014960) Commd10 (ENSJJAG00000019310) ENSJJAG00000004712 ENSJJAG00000004175 ENSJJAG00000024070 Dmxl1 (ENSJJAG00000012333) ENSJJAG00000019050 Cdk7 (ENSJJAG00000022068) Ccdc125 (ENSJJAG00000014719) ENSJJAG00000024099 Rad17 (ENSJJAG00000019042) Marveld2 (ENSJJAG00000000838) Ocln (ENSJJAG00000019972) Gtf2h2 (ENSJJAG00000021793) Muroidea ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Murinae ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Mus ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Mus_A ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Mus_B ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 Mus_C ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.a ##22 spretus MODERN SPECIES 9 Npy6r (MGP_SPRETEiJ_G0023155) Myot (MGP_SPRETEiJ_G0023156) Mcc (MGP_SPRETEiJ_G0023157) Dcp2 (MGP_SPRETEiJ_G0023158) Ythdc2 (MGP_SPRETEiJ_G0023159) Kcnn2 (MGP_SPRETEiJ_G0023160) Trim36 (MGP_SPRETEiJ_G0023161) Pggt1b (MGP_SPRETEiJ_G0023162) Ccdc112 (MGP_SPRETEiJ_G0023163) Fem1c (MGP_SPRETEiJ_G0023164) Ticam2 (MGP_SPRETEiJ_G0023165) Tmed7 (MGP_SPRETEiJ_G0023166) MGP_SPRETEiJ_G0023167 Cdo1 (MGP_SPRETEiJ_G0023168) Atg12 (MGP_SPRETEiJ_G0023169) Ap3s1 (MGP_SPRETEiJ_G0023170) ##22 Lvrn (MGP_SPRETEiJ_G0023171) Arl14epl (MGP_SPRETEiJ_G0023172) Commd10 (MGP_SPRETEiJ_G0023173) Sema6a (MGP_SPRETEiJ_G0023174) Dtwd2 (MGP_SPRETEiJ_G0023175) Dmxl1 (MGP_SPRETEiJ_G0023176) Tnfaip8 (MGP_SPRETEiJ_G0023177) Hsd17b4 (MGP_SPRETEiJ_G0023178) Fam170a (MGP_SPRETEiJ_G0023179) Pudp (MGP_SPRETEiJ_G0023180) Prr16 (MGP_SPRETEiJ_G0023181) MGP_SPRETEiJ_G0023182 Ftmt (MGP_SPRETEiJ_G0023183) Srfbp1 (MGP_SPRETEiJ_G0023184) Lox (MGP_SPRETEiJ_G0023185) Myomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.a.yb.b.a.b ##22 Lesser Egyptian jerboa MODERN SPECIES 106 Fam228a (ENSJJAG00000018793) Itsn2 (ENSJJAG00000014766) ENSJJAG00000010587 ENSJJAG00000010182 Ncoa1 (ENSJJAG00000000608) Ptrhd1 (ENSJJAG00000024180) Cenpo (ENSJJAG00000019283) Adcy3 (ENSJJAG00000018411) Dnajc27 (ENSJJAG00000016683) ENSJJAG00000016036 Efr3b (ENSJJAG00000014981) Pomc (ENSJJAG00000003230) Dnmt3a (ENSJJAG00000002007) ENSJJAG00000016173 Dtnb (ENSJJAG00000014850) ENSJJAG00000013951 ##22 Asxl2 (ENSJJAG00000020150) ENSJJAG00000013909 Kif3c (ENSJJAG00000018278) ENSJJAG00000018461 Garem2 (ENSJJAG00000017758) Hadha (ENSJJAG00000017662) Hadhb (ENSJJAG00000016783) ENSJJAG00000016201 ENSJJAG00000016077 Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Lesser Egyptian jerboa MODERN SPECIES 86 Hectd1 (ENSJJAG00000001344) #23 Ap4s1 (ENSJJAG00000022804) #22 Strn3 (ENSJJAG00000019703) #21 Coch (ENSJJAG00000019025) #20 G2e3 (ENSJJAG00000014439) #18 ENSJJAG00000001269 #16 ENSJJAG00000001174 Nova1 (ENSJJAG00000012915) #14 ENSJJAG00000001002 ENSJJAG00000015223 ENSJJAG00000012531 ENSJJAG00000012054 Ctsg (ENSJJAG00000009878) ENSJJAG00000016083 Cma1 (ENSJJAG00000014442) ENSJJAG00000004128 ##22 Sdr39u1 (ENSJJAG00000019692) Khnyn (ENSJJAG00000016379) Nynrin (ENSJJAG00000022144) Nfatc4 (ENSJJAG00000018906) Adcy4 (ENSJJAG00000012143) Nop9 (ENSJJAG00000015694) Dhrs1 (ENSJJAG00000011393) Rabggta (ENSJJAG00000011139) Tgm1 (ENSJJAG00000019662) Gmpr2 (ENSJJAG00000016981) Nedd8 (ENSJJAG00000013234) Tssk4 (ENSJJAG00000021240) Tm9sf1 (ENSJJAG00000012088) Ipo4 (ENSJJAG00000019002) Rnf31 (ENSJJAG00000016958) Muroidea ANCESTRAL SPECIES 4 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Upper Galilee mountains blind mole rat MODERN SPECIES 1883 Myot (ENSNGAG00000000563) ENSNGAG00000000846 Dcp2 (ENSNGAG00000001836) Mcc (ENSNGAG00000012439) Ythdc2 (ENSNGAG00000017798) Kcnn2 (ENSNGAG00000019084) ENSNGAG00000020283 Trim36 (ENSNGAG00000020970) Pggt1b (ENSNGAG00000006471) Ccdc112 (ENSNGAG00000010887) Fem1c (ENSNGAG00000013116) Tmed7 (ENSNGAG00000015696) ENSNGAG00000016970 Cdo1 (ENSNGAG00000018935) ENSNGAG00000019349 ENSNGAG00000016478 ##22 Lvrn (ENSNGAG00000018780) Arl14epl (ENSNGAG00000020789) Commd10 (ENSNGAG00000000496) ENSNGAG00000000955 Sema6a (ENSNGAG00000005129) Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 ENSGT00530000064208.b Golden Hamster MODERN SPECIES 634 Myot (ENSMAUG00000014226) Dcp2 (ENSMAUG00000013325) Mcc (ENSMAUG00000019507) Ythdc2 (ENSMAUG00000016179) Kcnn2 (ENSMAUG00000013907) Trim36 (ENSMAUG00000017118) Pggt1b (ENSMAUG00000016267) Ccdc112 (ENSMAUG00000013957) Fem1c (ENSMAUG00000013678) ENSMAUG00000012918 ENSMAUG00000017914 Tmed7 (ENSMAUG00000000849) ENSMAUG00000019719 Cdo1 (ENSMAUG00000018459) Atg12 (ENSMAUG00000017606) Ap3s1 (ENSMAUG00000017186) ##22 Lvrn (ENSMAUG00000013484) Arl14epl (ENSMAUG00000004419) Commd10 (ENSMAUG00000002125) Sema6a (ENSMAUG00000018043) Dtwd2 (ENSMAUG00000001266) Dmxl1 (ENSMAUG00000015588) Tnfaip8 (ENSMAUG00000012019) Hsd17b4 (ENSMAUG00000011187) Fam170a (ENSMAUG00000010368) Prr16 (ENSMAUG00000009966) Ftmt (ENSMAUG00000017687) Srfbp1 (ENSMAUG00000009431) Lox (ENSMAUG00000008060) 1700034E13Rik (ENSMAUG00000007545) Gykl1 (ENSMAUG00000005428) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 44 Poln (ENSCGRG00001007876) Nat8l (ENSCGRG00001023978) Gm1673 (ENSCGRG00001020043) Nelfa (ENSCGRG00001018745) Nsd2 (ENSCGRG00001008668) ENSCGRG00001022523 Letm1 (ENSCGRG00001022378) Fgfr3 (ENSCGRG00001014679) Tacc3 (ENSCGRG00001022858) Tmem129 (ENSCGRG00001014269) ENSCGRG00001009760 Fam53a (ENSCGRG00001022457) Nkx1-1 (ENSCGRG00001013497) Uvssa (ENSCGRG00001002995) Maea (ENSCGRG00001001581) ENSCGRG00001024773 ##22 Ctbp1 (ENSCGRG00001000660) Spon2 (ENSCGRG00001018510) Slc5a1 (ENSCGRG00001023507) Ywhah (ENSCGRG00001020682) Depdc5 (ENSCGRG00001024582) Prr14l (ENSCGRG00001016693) Pisd (ENSCGRG00001024345) Sfi1 (ENSCGRG00001019137) Eif4enif1 (ENSCGRG00001023434) ENSCGRG00001016369 Patz1 (ENSCGRG00001004071) Pik3ip1 (ENSCGRG00001023860) Limk2 (ENSCGRG00001012435) Rnf185 (ENSCGRG00001004828) Pla2g3 (ENSCGRG00001023730) Chinese hamster chok1gshd MODERN SPECIES 153 Myot (ENSCGRG00001018181) Dcp2 (ENSCGRG00001017084) Mcc (ENSCGRG00001021372) Ythdc2 (ENSCGRG00001021338) ENSCGRG00001019862 Kcnn2 (ENSCGRG00001011834) Trim36 (ENSCGRG00001021955) Pggt1b (ENSCGRG00001018390) Ccdc112 (ENSCGRG00001015824) Fem1c (ENSCGRG00001024497) Ticam2 (ENSCGRG00001007176) Tmed7 (ENSCGRG00001014046) ENSCGRG00001005357 Cdo1 (ENSCGRG00001018903) Atg12 (ENSCGRG00001012075) Ap3s1 (ENSCGRG00001000186) ##22 Lvrn (ENSCGRG00001020459) ENSCGRG00001000319 Commd10 (ENSCGRG00001017628) Sema6a (ENSCGRG00001021091) Dtwd2 (ENSCGRG00001012992) Dmxl1 (ENSCGRG00001022767) ENSCGRG00001020576 Tnfaip8 (ENSCGRG00001016982) Hsd17b4 (ENSCGRG00001017147) ENSCGRG00001010196 Fam170a (ENSCGRG00001022824) ENSCGRG00001007454 Pudp (ENSCGRG00001004277) ENSCGRG00001003744 Prr16 (ENSCGRG00001005826) Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b Prairie vole MODERN SPECIES 5 Gm10267 (ENSMOCG00000021096) Myot (ENSMOCG00000002496) Dcp2 (ENSMOCG00000014965) Mcc (ENSMOCG00000013709) Ythdc2 (ENSMOCG00000011740) Kcnn2 (ENSMOCG00000021123) ENSMOCG00000000243 Trim36 (ENSMOCG00000005907) Pggt1b (ENSMOCG00000020848) Ccdc112 (ENSMOCG00000014847) Fem1c (ENSMOCG00000009368) Ticam2 (ENSMOCG00000002517) Tmed7 (ENSMOCG00000014984) Cdo1 (ENSMOCG00000015413) Atg12 (ENSMOCG00000008509) Ap3s1 (ENSMOCG00000015584) ##22 Lvrn (ENSMOCG00000011207) Arl14epl (ENSMOCG00000019279) Commd10 (ENSMOCG00000005728) Sema6a (ENSMOCG00000018471) ENSMOCG00000014158 ENSMOCG00000001462 ENSMOCG00000002343 Dtwd2 (ENSMOCG00000008551) ENSMOCG00000011029 Dmxl1 (ENSMOCG00000000362) Tnfaip8 (ENSMOCG00000016075) Hsd17b4 (ENSMOCG00000017979) Fam170a (ENSMOCG00000018167) Prr16 (ENSMOCG00000021267) Ftmt (ENSMOCG00000001054) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000028298 Gm19935 (ENSPEMG00000026446) Tox3 (ENSPEMG00000019689) ENSPEMG00000026839 ENSPEMG00000005035 Sall1 (ENSPEMG00000012331) Cyld (ENSPEMG00000011322) Nod2 (ENSPEMG00000016933) Snx20 (ENSPEMG00000015231) Nkd1 (ENSPEMG00000028031) Brd7 (ENSPEMG00000015843) Adcy7 (ENSPEMG00000018675) Tent4b (ENSPEMG00000029372) Heatr3 (ENSPEMG00000016174) Cnep1r1 (ENSPEMG00000017702) ENSPEMG00000002704 ##22 Zfp423 (ENSPEMG00000015523) 4933402J07Rik (ENSPEMG00000016843) Cbln1 (ENSPEMG00000029511) N4bp1 (ENSPEMG00000016429) Siah1b (ENSPEMG00000008065) Lonp2 (ENSPEMG00000010377) Abcc12 (ENSPEMG00000015588) Phkb (ENSPEMG00000004503) Itfg1 (ENSPEMG00000013284) Neto2 (ENSPEMG00000014306) Dnaja2 (ENSPEMG00000016348) Gpt2 (ENSPEMG00000008151) 4921524J17Rik (ENSPEMG00000025838) Mylk3 (ENSPEMG00000000415) ENSPEMG00000021580 Northern American deer mouse MODERN SPECIES 3 ENSPEMG00000026489 ENSPEMG00000025860 Dzip3 (ENSPEMG00000019145) Cip2a (ENSPEMG00000017928) Myh15 (ENSPEMG00000009117) ENSPEMG00000028363 Ift57 (ENSPEMG00000018735) Cd47 (ENSPEMG00000017957) Bbx (ENSPEMG00000007033) Ccdc54 (ENSPEMG00000027662) Cblb (ENSPEMG00000013659) Alcam (ENSPEMG00000013478) Zpld1 (ENSPEMG00000007091) Nfkbiz (ENSPEMG00000010338) Nxpe3 (ENSPEMG00000011617) ENSPEMG00000030353 ##22 Cep97 (ENSPEMG00000029940) ENSPEMG00000013262 ENSPEMG00000012043 Zbtb11 (ENSPEMG00000013233) ENSPEMG00000017850 Trmt10c (ENSPEMG00000006986) Senp7 (ENSPEMG00000011146) ENSPEMG00000008660 Impg2 (ENSPEMG00000008671) Abi3bp (ENSPEMG00000013685) Tfg (ENSPEMG00000004990) Adgrg7 (ENSPEMG00000015621) Tmem45a (ENSPEMG00000017975) Lnp1 (ENSPEMG00000029284) ENSPEMG00000024759 Northern American deer mouse MODERN SPECIES 10 Dcp2 (ENSPEMG00000009060) Mcc (ENSPEMG00000010260) Ythdc2 (ENSPEMG00000018062) Kcnn2 (ENSPEMG00000015261) Trim36 (ENSPEMG00000009608) Pggt1b (ENSPEMG00000015434) Ccdc112 (ENSPEMG00000018319) ENSPEMG00000029156 ENSPEMG00000030638 Fem1c (ENSPEMG00000026058) Ticam2 (ENSPEMG00000014919) Tmed7 (ENSPEMG00000018375) ENSPEMG00000026310 Cdo1 (ENSPEMG00000008331) Atg12 (ENSPEMG00000031299) ENSPEMG00000010498 ##22 Lvrn (ENSPEMG00000013293) Arl14epl (ENSPEMG00000016519) Commd10 (ENSPEMG00000014727) Sema6a (ENSPEMG00000005804) Dtwd2 (ENSPEMG00000008152) Dmxl1 (ENSPEMG00000023444) Tnfaip8 (ENSPEMG00000028302) Hsd17b4 (ENSPEMG00000019706) Fam170a (ENSPEMG00000019559) Pudp (ENSPEMG00000024589) ENSPEMG00000012704 Prr16 (ENSPEMG00000019646) ENSPEMG00000012557 Ftmt (ENSPEMG00000012587) Srfbp1 (ENSPEMG00000030711) Murinae ANCESTRAL SPECIES 17 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000014753.g ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Rat DUPLICATION Rat MODERN SPECIES 10 Phaf1 (ENSRNOG00000014668) Cbfb (ENSRNOG00000014647) Ces4a (ENSRNOG00000014257) ENSRNOG00000066514 Ces2h (ENSRNOG00000039079) Ces2g (ENSRNOG00000070043) Slc25a36l1 (ENSRNOG00000054284) ENSRNOG00000070405 Rps27a-ps6 (ENSRNOG00000029317) Nr3c2 (ENSRNOG00000034007) LOC102552913 (ENSRNOG00000027022) Arhgap10 (ENSRNOG00000013152) Prmt9 (ENSRNOG00000012928) Tmem184c (ENSRNOG00000012860) Ednra (ENSRNOG00000012721) ENSRNOG00000062839 ##22 Ttc29 (ENSRNOG00000012342) Pou4f2 (ENSRNOG00000012167) AABR07043626.1 (ENSRNOG00000033487) Rbmxl1 (ENSRNOG00000062375) Slc10a7 (ENSRNOG00000011991) Zfp827 (ENSRNOG00000011697) LOC498933 (ENSRNOG00000011671) Mmaa (ENSRNOG00000011618) Smad1 (ENSRNOG00000018483) Otud4 (ENSRNOG00000018477) Abce1 (ENSRNOG00000018345) Anapc10 (ENSRNOG00000018296) Hhip (ENSRNOG00000018268) Gypa (ENSRNOG00000062794) ENSRNOG00000063111 Rat MODERN SPECIES 9 Kcnn2 (ENSRNOG00000016675) LOC120098318 (ENSRNOG00000030301) Trim36 (ENSRNOG00000016612) LOC108348781 (ENSRNOG00000050666) Pggt1b (ENSRNOG00000003541) Ccdc112 (ENSRNOG00000003559) ENSRNOG00000062435 Mospd4 (ENSRNOG00000003575) Fem1c (ENSRNOG00000003578) Ticam2 (ENSRNOG00000042070) Tmed7 (ENSRNOG00000003691) Eif1a (ENSRNOG00000031421) Cdo1 (ENSRNOG00000000158) ENSRNOG00000071175 Atg12 (ENSRNOG00000000157) Ap3s1 (ENSRNOG00000003829) ##22 LOC317165 (ENSRNOG00000052952) Lvrn (ENSRNOG00000003950) Arl14epl (ENSRNOG00000025590) Commd10 (ENSRNOG00000003958) ENSRNOG00000062510 Sema6a (ENSRNOG00000004033) RGD1561627 (ENSRNOG00000051817) ENSRNOG00000069808 Dtwd2 (ENSRNOG00000059142) Dmxl1 (ENSRNOG00000024671) Tnfaip8 (ENSRNOG00000026136) Hsd17b4 (ENSRNOG00000015840) Fam170a (ENSRNOG00000015834) Pudp (ENSRNOG00000025422) AABR07032097.1 (ENSRNOG00000019744) Mus ANCESTRAL SPECIES 19 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000014753.g ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Shrew mouse MODERN SPECIES 6 MGP_PahariEiJ_G0018976 Npy6r (MGP_PahariEiJ_G0018977) Myot (MGP_PahariEiJ_G0018978) Dcp2 (MGP_PahariEiJ_G0018979) Mcc (MGP_PahariEiJ_G0018980) Ythdc2 (MGP_PahariEiJ_G0018981) Kcnn2 (MGP_PahariEiJ_G0018982) Trim36 (MGP_PahariEiJ_G0018983) Pggt1b (MGP_PahariEiJ_G0018984) Ccdc112 (MGP_PahariEiJ_G0018985) Fem1c (MGP_PahariEiJ_G0018986) Ticam2 (MGP_PahariEiJ_G0018987) Tmed7 (MGP_PahariEiJ_G0018988) Cdo1 (MGP_PahariEiJ_G0018989) Atg12 (MGP_PahariEiJ_G0018990) MGP_PahariEiJ_G0018991 ##22 Lvrn (MGP_PahariEiJ_G0018992) MGP_PahariEiJ_G0018993 Commd10 (MGP_PahariEiJ_G0018994) Sema6a (MGP_PahariEiJ_G0018995) Dtwd2 (MGP_PahariEiJ_G0018996) Dmxl1 (MGP_PahariEiJ_G0018997) Tnfaip8 (MGP_PahariEiJ_G0018998) Hsd17b4 (MGP_PahariEiJ_G0018999) Fam170a (MGP_PahariEiJ_G0019000) Pudp (MGP_PahariEiJ_G0019001) Prr16 (MGP_PahariEiJ_G0019002) Ftmt (MGP_PahariEiJ_G0019003) Srfbp1 (MGP_PahariEiJ_G0019004) Lox (MGP_PahariEiJ_G0019005) Zfp474 (MGP_PahariEiJ_G0019006) Mus_A ANCESTRAL SPECIES 19 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000014753.g ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Ryukyu mouse MODERN SPECIES 9 Npy6r (MGP_CAROLIEiJ_G0022244) Myot (MGP_CAROLIEiJ_G0022245) Dcp2 (MGP_CAROLIEiJ_G0022246) Mcc (MGP_CAROLIEiJ_G0022247) Ythdc2 (MGP_CAROLIEiJ_G0022248) Kcnn2 (MGP_CAROLIEiJ_G0022249) Trim36 (MGP_CAROLIEiJ_G0022250) Pggt1b (MGP_CAROLIEiJ_G0022251) Ccdc112 (MGP_CAROLIEiJ_G0022252) Fem1c (MGP_CAROLIEiJ_G0022253) Ticam2 (MGP_CAROLIEiJ_G0022254) Tmed7 (MGP_CAROLIEiJ_G0022255) MGP_CAROLIEiJ_G0022256 Cdo1 (MGP_CAROLIEiJ_G0022257) Atg12 (MGP_CAROLIEiJ_G0022258) MGP_CAROLIEiJ_G0022259 ##22 Lvrn (MGP_CAROLIEiJ_G0022260) Commd10 (MGP_CAROLIEiJ_G0022261) Sema6a (MGP_CAROLIEiJ_G0022262) Dtwd2 (MGP_CAROLIEiJ_G0022263) Dmxl1 (MGP_CAROLIEiJ_G0022264) Tnfaip8 (MGP_CAROLIEiJ_G0022265) Hsd17b4 (MGP_CAROLIEiJ_G0022266) Fam170a (MGP_CAROLIEiJ_G0022267) Pudp (MGP_CAROLIEiJ_G0022268) Prr16 (MGP_CAROLIEiJ_G0022269) Ftmt (MGP_CAROLIEiJ_G0022270) Srfbp1 (MGP_CAROLIEiJ_G0022271) Lox (MGP_CAROLIEiJ_G0022272) Zfp474 (MGP_CAROLIEiJ_G0022273) 1700034E13Rik (MGP_CAROLIEiJ_G0022274) Mus_B ANCESTRAL SPECIES 19 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.a.b.a.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000014753.g ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Mouse MODERN SPECIES 9 Npy6r (ENSMUSG00000038071) Myot (ENSMUSG00000024471) Dcp2 (ENSMUSG00000024472) Mcc (ENSMUSG00000071856) Ythdc2 (ENSMUSG00000034653) Kcnn2 (ENSMUSG00000054477) Trim36 (ENSMUSG00000033949) Pggt1b (ENSMUSG00000024477) Ccdc112 (ENSMUSG00000071855) Fem1c (ENSMUSG00000033319) Ticam2 (ENSMUSG00000056130) Tmed7 (ENSMUSG00000033184) Eif1a (ENSMUSG00000057561) Cdo1 (ENSMUSG00000033022) Atg12 (ENSMUSG00000032905) Ap3s1 (ENSMUSG00000024480) ##22 Lvrn (ENSMUSG00000024481) Arl14epl (ENSMUSG00000073568) Commd10 (ENSMUSG00000042705) Hspe1-rs1 (ENSMUSG00000117621) Sema6a (ENSMUSG00000019647) Eno1b (ENSMUSG00000059040) Dtwd2 (ENSMUSG00000024505) Dmxl1 (ENSMUSG00000037416) Tnfaip8 (ENSMUSG00000062210) Hsd17b4 (ENSMUSG00000024507) Fam170a (ENSMUSG00000035420) Pudp (ENSMUSG00000048875) Prr16 (ENSMUSG00000073565) Ftmt (ENSMUSG00000024510) Srfbp1 (ENSMUSG00000024528) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000008256.j.b ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00390000014753.g ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00940000164652 Steppe mouse DUPLICATION Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2961 Abtb3 (ENSMSIG00000029742) Cry1 (ENSMSIG00000029783) Mterf2 (ENSMSIG00000029793) Tmem263 (ENSMSIG00000029794) Fhl4 (ENSMSIG00000029796) Ric8b (ENSMSIG00000029801) ENSMSIG00000029841 ##22 Rfx4 (ENSMSIG00000029858) Polr3b (ENSMSIG00000029878) ENSMSIG00000029916 Ckap4 (ENSMSIG00000029919) Nuak1 (ENSMSIG00000029927) ENSMSIG00000029931 Steppe mouse MODERN SPECIES 3188 Ces5a (ENSMSIG00000001930) Gnao1 (ENSMSIG00000002005) Amfr (ENSMSIG00000002046) Nudt21 (ENSMSIG00000002236) Ogfod1 (ENSMSIG00000002313) Bbs2 (ENSMSIG00000002588) Mt4 (ENSMSIG00000002709) ENSMSIG00000002726 ENSMSIG00000002762 Mt1 (ENSMSIG00000002791) Nup93 (ENSMSIG00000002844) Slc12a3 (ENSMSIG00000003014) ENSMSIG00000003155 ENSMSIG00000003207 ##22 ENSMSIG00000003251 Nlrc5 (ENSMSIG00000003280) Cpne2 (ENSMSIG00000003647) Psme3ip1 (ENSMSIG00000003725) Rspry1 (ENSMSIG00000003743) ENSMSIG00000003803 Pllp (ENSMSIG00000003961) Ccl22 (ENSMSIG00000003997) Cx3cl1 (ENSMSIG00000004032) Ccl17 (ENSMSIG00000004052) Ciapin1 (ENSMSIG00000004084) Coq9 (ENSMSIG00000004128) Polr2c (ENSMSIG00000004232) Dok4 (ENSMSIG00000004367) Ccdc102a (ENSMSIG00000004396) Steppe mouse MODERN SPECIES 2897 ENSMSIG00000002693 Trim36 (ENSMSIG00000002735) ENSMSIG00000002840 Pggt1b (ENSMSIG00000002850) Ccdc112 (ENSMSIG00000002877) ENSMSIG00000002929 ENSMSIG00000002951 Fem1c (ENSMSIG00000002984) Ticam2 (ENSMSIG00000003000) Tmed7 (ENSMSIG00000003011) ENSMSIG00000003064 Cdo1 (ENSMSIG00000003079) Atg12 (ENSMSIG00000003103) Ap3s1 (ENSMSIG00000003130) ##22 Lvrn (ENSMSIG00000003241) ENSMSIG00000003317 Commd10 (ENSMSIG00000003330) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000154808.a.b ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00940000154808.a.b ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00910000148135 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 Hystricomorpha_a ANCESTRAL SPECIES 28 ENSGT00940000157891 ENSGT00940000154808.a.b ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 Guinea pig MODERN SPECIES 17 SPOCK1 (ENSCPOG00000000622) KLHL3 (ENSCPOG00000011147) HNRNPA0 (ENSCPOG00000026092) MYOT (ENSCPOG00000001651) DCP2 (ENSCPOG00000001648) MCC (ENSCPOG00000013076) YTHDC2 (ENSCPOG00000000272) KCNN2 (ENSCPOG00000000641) TRIM36 (ENSCPOG00000010191) ENSCPOG00000037752 CCDC112 (ENSCPOG00000032662) ENSCPOG00000032102 TMED7 (ENSCPOG00000040567) CDO1 (ENSCPOG00000001347) ATG12 (ENSCPOG00000035409) AP3S1 (ENSCPOG00000031936) ##22 LVRN (ENSCPOG00000001489) ARL14EPL (ENSCPOG00000024043) COMMD10 (ENSCPOG00000020474) SEMA6A (ENSCPOG00000007703) DTWD2 (ENSCPOG00000033642) DMXL1 (ENSCPOG00000006883) TNFAIP8 (ENSCPOG00000023826) HSD17B4 (ENSCPOG00000010071) PRR16 (ENSCPOG00000035699) ENSCPOG00000035905 ENSCPOG00000021617 LYNX1 (ENSCPOG00000039168) SLURP2 (ENSCPOG00000040257) SLURP1 (ENSCPOG00000032557) THEM6 (ENSCPOG00000021643) Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00940000157891 ENSGT00940000154808.a.b ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 Long-tailed chinchilla MODERN SPECIES 115 HNRNPA0 (ENSCLAG00000015132) ENSCLAG00000015861 MYOT (ENSCLAG00000015025) DCP2 (ENSCLAG00000014751) MCC (ENSCLAG00000014694) ENSCLAG00000015291 YTHDC2 (ENSCLAG00000014076) KCNN2 (ENSCLAG00000016274) TRIM36 (ENSCLAG00000014933) PGGT1B (ENSCLAG00000014956) CCDC112 (ENSCLAG00000014116) FEM1C (ENSCLAG00000015118) TMED7 (ENSCLAG00000016062) CDO1 (ENSCLAG00000016289) ATG12 (ENSCLAG00000015170) AP3S1 (ENSCLAG00000017137) ##22 LVRN (ENSCLAG00000015763) ARL14EPL (ENSCLAG00000016203) COMMD10 (ENSCLAG00000015544) SEMA6A (ENSCLAG00000014716) DTWD2 (ENSCLAG00000015770) DMXL1 (ENSCLAG00000016911) TNFAIP8 (ENSCLAG00000015895) HSD17B4 (ENSCLAG00000017335) ENSCLAG00000016472 Degu DUPLICATION Degu MODERN SPECIES 252 ENSODEG00000002660 ENSODEG00000002647 ##22 HEPH (ENSODEG00000003182) MSN (ENSODEG00000003097) ENSODEG00000003056 LAS1L (ENSODEG00000003001) ENSODEG00000002977 ENSODEG00000018885 ENSODEG00000002966 ZC4H2 (ENSODEG00000002954) ENSODEG00000018865 ASB12 (ENSODEG00000002937) ENSODEG00000002930 ENSODEG00000002920 ARHGEF9 (ENSODEG00000002707) SPIN4 (ENSODEG00000018809) ENSODEG00000002601 Degu MODERN SPECIES 133 ENSODEG00000014635 GALE (ENSODEG00000015082) HMGCL (ENSODEG00000014361) FUCA1 (ENSODEG00000013698) CNR2 (ENSODEG00000014788) ENSODEG00000020207 MYOM3 (ENSODEG00000014259) IL22RA1 (ENSODEG00000015339) IFNLR1 (ENSODEG00000014258) GRHL3 (ENSODEG00000014148) STPG1 (ENSODEG00000014432) NIPAL3 (ENSODEG00000015480) RCAN3 (ENSODEG00000014403) NCMAP (ENSODEG00000014196) ENSODEG00000013381 ENSODEG00000014994 ##22 CLIC4 (ENSODEG00000015014) RUNX3 (ENSODEG00000013557) ENSODEG00000020175 ENSODEG00000014338 RSRP1 (ENSODEG00000014609) ENSODEG00000014039 ENSODEG00000013632 MACO1 (ENSODEG00000014747) LDLRAP1 (ENSODEG00000013216) MAN1C1 (ENSODEG00000013579) SELENON (ENSODEG00000014831) MTFR1L (ENSODEG00000013501) AUNIP (ENSODEG00000013714) PAQR7 (ENSODEG00000020104) ENSODEG00000014041 Degu MODERN SPECIES 165 ENSODEG00000001835 ENSODEG00000001853 KCNN2 (ENSODEG00000002004) TRIM36 (ENSODEG00000002034) PGGT1B (ENSODEG00000002053) CCDC112 (ENSODEG00000002154) FEM1C (ENSODEG00000002045) ENSODEG00000018754 TMED7 (ENSODEG00000002066) CDO1 (ENSODEG00000002104) ATG12 (ENSODEG00000002126) ENSODEG00000002163 ##22 LVRN (ENSODEG00000002192) ARL14EPL (ENSODEG00000002532) ENSODEG00000002563 ENSODEG00000002580 ENSODEG00000002602 SEMA6A (ENSODEG00000002653) ENSODEG00000002744 ENSODEG00000018768 ENSODEG00000018846 DTWD2 (ENSODEG00000001974) ENSODEG00000018764 DMXL1 (ENSODEG00000002200) ENSODEG00000002485 ENSODEG00000018825 HSD17B4 (ENSODEG00000002614) Degu MODERN SPECIES 181 SIKE1 (ENSODEG00000007343) ENSODEG00000010107 SYCP1 (ENSODEG00000006927) TSHB (ENSODEG00000009005) TSPAN2 (ENSODEG00000007319) NGF (ENSODEG00000006538) ENSODEG00000006379 ENSODEG00000008957 ENSODEG00000008559 VANGL1 (ENSODEG00000010599) CASQ2 (ENSODEG00000009014) NHLH2 (ENSODEG00000008157) SLC22A15 (ENSODEG00000007565) MAB21L3 (ENSODEG00000005924) ATP1A1 (ENSODEG00000006810) ENSODEG00000006132 ##22 IGSF3 (ENSODEG00000007439) ENSODEG00000006855 PTGFRN (ENSODEG00000006807) CD101 (ENSODEG00000006286) ENSODEG00000006362 TRIM45 (ENSODEG00000007020) VTCN1 (ENSODEG00000006757) MAN1A2 (ENSODEG00000005674) TENT5C (ENSODEG00000006187) ENSODEG00000005813 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 17 ENSHGLG00000032795 ENSHGLG00000019452 ENSHGLG00000050528 NDUFA10 (ENSHGLG00000018750) HDAC4 (ENSHGLG00000018971) TWIST2 (ENSHGLG00000048858) ASB1 (ENSHGLG00000010875) ENSHGLG00000050953 TRAF3IP1 (ENSHGLG00000008815) PER2 (ENSHGLG00000007462) HES6 (ENSHGLG00000049865) ILKAP (ENSHGLG00000005371) KLHL30 (ENSHGLG00000005168) SCLY (ENSHGLG00000006999) ENSHGLG00000006249 ENSHGLG00000047734 ##22 ENSHGLG00000044706 ENSHGLG00000043226 RBM44 (ENSHGLG00000004621) ENSHGLG00000003183 PRLH (ENSHGLG00000002592) MLPH (ENSHGLG00000002426) COL6A3 (ENSHGLG00000012006) COPS8 (ENSHGLG00000008745) ACKR3 (ENSHGLG00000008401) IQCA1 (ENSHGLG00000018573) ASB18 (ENSHGLG00000018519) GBX2 (ENSHGLG00000018155) AGAP1 (ENSHGLG00000019295) SH3BP4 (ENSHGLG00000019412) ENSHGLG00000049334 Naked mole-rat female MODERN SPECIES 26 ENOPH1 (ENSHGLG00000015044) ENSHGLG00000015791 HNRNPD (ENSHGLG00000004214) ENSHGLG00000044587 RASGEF1B (ENSHGLG00000006201) PRKG2 (ENSHGLG00000007272) BMP3 (ENSHGLG00000007595) CFAP299 (ENSHGLG00000007902) ENSHGLG00000032267 FGF5 (ENSHGLG00000008222) ENSHGLG00000039017 PRDM8 (ENSHGLG00000047978) ANTXR2 (ENSHGLG00000003724) ENSHGLG00000037275 ENSHGLG00000005029 ENSHGLG00000040695 ##22 GK2 (ENSHGLG00000004055) ENSHGLG00000040025 NAA11 (ENSHGLG00000004240) ENSHGLG00000004308 ENSHGLG00000004648 ANXA3 (ENSHGLG00000005040) ENSHGLG00000005415 ENSHGLG00000049854 ENSHGLG00000013760 ENSHGLG00000045804 ENSHGLG00000008980 ENSHGLG00000013357 ENSHGLG00000015705 BMPR1B (ENSHGLG00000008496) ENSHGLG00000035615 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000000166 ENSHGLG00000000179 ENSHGLG00000000200 ENSHGLG00000048262 ENSHGLG00000044620 ENSHGLG00000001009 ENSHGLG00000049997 RNF150 (ENSHGLG00000000594) ENSHGLG00000048416 ZNF330 (ENSHGLG00000000725) ENSHGLG00000042945 ENSHGLG00000007865 IL15 (ENSHGLG00000038275) ENSHGLG00000047631 ENSHGLG00000001548 ENSHGLG00000019770 ##22 ENSHGLG00000049550 ENSHGLG00000042451 ENSHGLG00000000870 ENSHGLG00000049616 ENSHGLG00000001875 ENSHGLG00000038593 ENSHGLG00000002344 ENSHGLG00000032409 LRAT (ENSHGLG00000045268) ENSHGLG00000000458 ENSHGLG00000000499 ENSHGLG00000001008 ENSHGLG00000041757 ENSHGLG00000048241 ANAPC10 (ENSHGLG00000038398) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000005109 CPE (ENSHGLG00000044272) ENSHGLG00000050964 ENSHGLG00000038708 ENSHGLG00000041799 ENSHGLG00000043287 ENSHGLG00000006655 ENSHGLG00000049226 ENSHGLG00000034446 ENSHGLG00000047271 ENSHGLG00000039306 ENSHGLG00000035113 ANXA10 (ENSHGLG00000001262) ENSHGLG00000050525 ENSHGLG00000013790 ENSHGLG00000034493 ##22 PALLD (ENSHGLG00000015506) ENSHGLG00000032370 SH3RF1 (ENSHGLG00000016975) NEK1 (ENSHGLG00000012517) CLCN3 (ENSHGLG00000007901) HPF1 (ENSHGLG00000009625) ENSHGLG00000047060 MFAP3L (ENSHGLG00000010673) ENSHGLG00000011567 AADAT (ENSHGLG00000046534) ENSHGLG00000042689 ENSHGLG00000037600 ENSHGLG00000007421 ENSHGLG00000037597 ENSHGLG00000005258 Naked mole-rat female MODERN SPECIES 4 ENSHGLG00000049336 USP54 (ENSHGLG00000017101) PPP3CB (ENSHGLG00000017090) MSS51 (ENSHGLG00000035480) ENSHGLG00000018045 CFAP70 (ENSHGLG00000013200) MRPS16 (ENSHGLG00000049739) DNAJC9 (ENSHGLG00000012672) FAM149B1 (ENSHGLG00000012456) ECD (ENSHGLG00000012289) NUDT13 (ENSHGLG00000049514) P4HA1 (ENSHGLG00000011764) PLA2G12B (ENSHGLG00000048139) OIT3 (ENSHGLG00000011087) ENSHGLG00000048846 ENSHGLG00000038460 ##22 MICU1 (ENSHGLG00000014094) ENSHGLG00000041556 DNAJB12 (ENSHGLG00000013803) ENSHGLG00000044651 DDIT4 (ENSHGLG00000046524) ANAPC16 (ENSHGLG00000012554) ASCC1 (ENSHGLG00000033774) SPOCK2 (ENSHGLG00000012068) ENSHGLG00000011871 CHST3 (ENSHGLG00000011547) PSAP (ENSHGLG00000011266) ENSHGLG00000015060 VSIR (ENSHGLG00000019217) C10orf105 (ENSHGLG00000019204) SLC29A3 (ENSHGLG00000014732) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000034793 ENSHGLG00000005256 ENSHGLG00000013364 ENSHGLG00000014979 ENSHGLG00000043176 TRIM36 (ENSHGLG00000010335) PGGT1B (ENSHGLG00000015333) ENSHGLG00000006611 CCDC112 (ENSHGLG00000018021) ENSHGLG00000037102 FEM1C (ENSHGLG00000043263) TICAM2 (ENSHGLG00000033848) TMED7 (ENSHGLG00000039198) CDO1 (ENSHGLG00000019411) ATG12 (ENSHGLG00000041482) ENSHGLG00000007878 ##22 ENSHGLG00000040438 LVRN (ENSHGLG00000009169) ARL14EPL (ENSHGLG00000033293) COMMD10 (ENSHGLG00000035743) ENSHGLG00000035376 SEMA6A (ENSHGLG00000014606) ENSHGLG00000006231 ENSHGLG00000041113 PAX8 (ENSHGLG00000015233) ENSHGLG00000040841 ENSHGLG00000038423 ENSHGLG00000016761 IL1RN (ENSHGLG00000048066) IL1F10 (ENSHGLG00000049458) IL36RN (ENSHGLG00000007845) Naked mole-rat female MODERN SPECIES 1 CD38 (ENSHGLG00000047314) ENSHGLG00000001621 BST1 (ENSHGLG00000007923) FBXL5 (ENSHGLG00000008241) CC2D2A (ENSHGLG00000008572) C1QTNF7 (ENSHGLG00000008916) CPEB2 (ENSHGLG00000018058) ENSHGLG00000045266 BOD1L1 (ENSHGLG00000018076) NKX3-2 (ENSHGLG00000033026) RAB28 (ENSHGLG00000048410) ENSHGLG00000048028 ENSHGLG00000018894 HS3ST1 (ENSHGLG00000039231) ENSHGLG00000033331 ENSHGLG00000013569 ##22 CLNK (ENSHGLG00000018872) ZNF518B (ENSHGLG00000043144) ENSHGLG00000037795 ENSHGLG00000045526 WDR1 (ENSHGLG00000017187) SLC2A9 (ENSHGLG00000017198) DRD5 (ENSHGLG00000014396) ENSHGLG00000014488 ENSHGLG00000014536 LYAR (ENSHGLG00000039937) ZBTB49 (ENSHGLG00000046826) NSG1 (ENSHGLG00000014668) STX18 (ENSHGLG00000004074) ENSHGLG00000032792 MSX1 (ENSHGLG00000004181) Naked mole-rat female MODERN SPECIES 4 GPAM (ENSHGLG00000011966) ENSHGLG00000038445 ADRA2A (ENSHGLG00000043876) ENSHGLG00000010758 BBIP1 (ENSHGLG00000010067) PDCD4 (ENSHGLG00000010690) RBM20 (ENSHGLG00000013206) ENSHGLG00000036688 SMC3 (ENSHGLG00000014422) ENSHGLG00000045441 DUSP5 (ENSHGLG00000012607) SMNDC1 (ENSHGLG00000013390) MXI1 (ENSHGLG00000037614) ENSHGLG00000033270 ENSHGLG00000044804 ENSHGLG00000049850 ##22 ENSHGLG00000010854 XPNPEP1 (ENSHGLG00000013820) ENSHGLG00000010059 ENSHGLG00000039801 SORCS1 (ENSHGLG00000002729) ENSHGLG00000039825 SORCS3 (ENSHGLG00000001754) CFAP58 (ENSHGLG00000002793) ITPRIP (ENSHGLG00000046163) GSTO2 (ENSHGLG00000049945) GSTO1 (ENSHGLG00000002485) CFAP43 (ENSHGLG00000035856) ENSHGLG00000033849 COL17A1 (ENSHGLG00000003598) SLK (ENSHGLG00000003084) Sciuridae ANCESTRAL SPECIES 18 ENSGT00940000154808.a.b ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 7 CFAP20DC (ENSSVLG00005018694) FHIT (ENSSVLG00005018873) ENSSVLG00005018937 PTPRG (ENSSVLG00005019016) C3orf14 (ENSSVLG00005019094) FEZF2 (ENSSVLG00005019149) CADPS (ENSSVLG00005019850) ENSSVLG00005020948 SYNPR (ENSSVLG00005021015) SNTN (ENSSVLG00005021224) C3orf49 (ENSSVLG00005021282) THOC7 (ENSSVLG00005021365) ATXN7 (ENSSVLG00005021435) PSMD6 (ENSSVLG00005021483) PRICKLE2 (ENSSVLG00005021577) ENSSVLG00005021617 ##22 ADAMTS9 (ENSSVLG00005021681) MAGI1 (ENSSVLG00005021826) ENSSVLG00005022516 SLC25A26 (ENSSVLG00005022537) ENSSVLG00005022646 ENSSVLG00005022656 LRIG1 (ENSSVLG00005022675) ENSSVLG00005022709 ENSSVLG00005022735 ENSSVLG00005022762 ENSSVLG00005022792 ENSSVLG00005022824 ENSSVLG00005022877 ENSSVLG00005022904 ENSSVLG00005022980 Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005009891 MCC (ENSSVLG00005010115) YTHDC2 (ENSSVLG00005010386) ENSSVLG00005010432 KCNN2 (ENSSVLG00005010478) TRIM36 (ENSSVLG00005010757) ENSSVLG00005011064 PGGT1B (ENSSVLG00005011153) CCDC112 (ENSSVLG00005011212) FEM1C (ENSSVLG00005011351) TICAM2 (ENSSVLG00005011394) TMED7 (ENSSVLG00005011408) CDO1 (ENSSVLG00005011463) ATG12 (ENSSVLG00005011551) ENSSVLG00005011595 ENSSVLG00005011641 ##22 LVRN (ENSSVLG00005011828) ARL14EPL (ENSSVLG00005012343) COMMD10 (ENSSVLG00005012399) ENSSVLG00005012468 SEMA6A (ENSSVLG00005012549) DTWD2 (ENSSVLG00005012756) ENSSVLG00005012914 DMXL1 (ENSSVLG00005013390) TNFAIP8 (ENSSVLG00005013590) HSD17B4 (ENSSVLG00005014102) ENSSVLG00005015334 FAM170A (ENSSVLG00005015371) ENSSVLG00005015426 ENSSVLG00005015460 ENSSVLG00005015499 Eurasian red squirrel MODERN SPECIES 14 CACNG2 (ENSSVLG00005017514) ENSSVLG00005017489 EIF3D (ENSSVLG00005017443) FOXRED2 (ENSSVLG00005017342) TXN2 (ENSSVLG00005017265) MYH9 (ENSSVLG00005017145) ENSSVLG00005016959 RBFOX2 (ENSSVLG00005016647) MB (ENSSVLG00005016569) ENSSVLG00005016531 MCM5 (ENSSVLG00005016456) ENSSVLG00005016423 TOM1 (ENSSVLG00005016329) HMGXB4 (ENSSVLG00005016292) ISX (ENSSVLG00005016243) ENSSVLG00005016204 ##22 ENSSVLG00005016143 LARGE1 (ENSSVLG00005016069) TIMP3 (ENSSVLG00005016020) SYN3 (ENSSVLG00005015786) FBXO7 (ENSSVLG00005015587) ENSSVLG00005015555 BPIFC (ENSSVLG00005015293) RTCB (ENSSVLG00005015218) ASCL4 (ENSSVLG00005015197) PRDM4 (ENSSVLG00005015092) ENSSVLG00005015021 PWP1 (ENSSVLG00005014967) ABTB3 (ENSSVLG00005014263) ENSSVLG00005014113 CRY1 (ENSSVLG00005013998) Marmotini ANCESTRAL SPECIES 50 ENSGT00940000163511 ENSGT00940000159795 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000164712 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b Marmotini_b ANCESTRAL SPECIES 223 ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000163706 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a.yb.b ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 Squirrel MODERN SPECIES 342 TRIM36 (ENSSTOG00000002646) PGGT1B (ENSSTOG00000006293) CCDC112 (ENSSTOG00000006316) FEM1C (ENSSTOG00000027478) TICAM2 (ENSSTOG00000021613) TMED7 (ENSSTOG00000020508) ENSSTOG00000019761 CDO1 (ENSSTOG00000011747) ATG12 (ENSSTOG00000011755) AP3S1 (ENSSTOG00000011759) ##22 LVRN (ENSSTOG00000007310) ARL14EPL (ENSSTOG00000024281) COMMD10 (ENSSTOG00000022172) SEMA6A (ENSSTOG00000001707) Arctic ground squirrel MODERN SPECIES 664 FEM1C (ENSUPAG00010020828) ENSUPAG00010020825 TMED7 (ENSUPAG00010020819) CDO1 (ENSUPAG00010020810) ENSUPAG00010020806 AP3S1 (ENSUPAG00010020793) ##22 LVRN (ENSUPAG00010020773) Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 7 KIAA0586 (ENSMMMG00000005607) TIMM9 (ENSMMMG00000005557) ENSMMMG00000005547 ARID4A (ENSMMMG00000005513) PSMA3 (ENSMMMG00000005482) ACTR10 (ENSMMMG00000005466) ARMH4 (ENSMMMG00000005430) SLC35F4 (ENSMMMG00000005414) CCDC198 (ENSMMMG00000005385) NAA30 (ENSMMMG00000005369) ENSMMMG00000005364 AP5M1 (ENSMMMG00000005334) EXOC5 (ENSMMMG00000005231) ENSMMMG00000005219 OTX2 (ENSMMMG00000005205) ENSMMMG00000005191 ##22 TMEM260 (ENSMMMG00000005095) PELI2 (ENSMMMG00000005044) ENSMMMG00000005015 KTN1 (ENSMMMG00000003061) ENSMMMG00000002960 TBPL2 (ENSMMMG00000002943) ATG14 (ENSMMMG00000002906) FBXO34 (ENSMMMG00000002895) ENSMMMG00000002883 LGALS3 (ENSMMMG00000002842) MAPK1IP1L (ENSMMMG00000002821) SOCS4 (ENSMMMG00000002820) WDHD1 (ENSMMMG00000002686) GCH1 (ENSMMMG00000002659) SAMD4A (ENSMMMG00000002450) Alpin marmot MODERN SPECIES 23 ENSMMMG00000006399 MYOT (ENSMMMG00000006402) DCP2 (ENSMMMG00000006454) MCC (ENSMMMG00000006493) ENSMMMG00000006590 YTHDC2 (ENSMMMG00000006595) KCNN2 (ENSMMMG00000006643) TRIM36 (ENSMMMG00000006697) PGGT1B (ENSMMMG00000006732) CCDC112 (ENSMMMG00000006753) FEM1C (ENSMMMG00000006765) ENSMMMG00000006772 TMED7 (ENSMMMG00000006774) CDO1 (ENSMMMG00000006791) ENSMMMG00000006800 ENSMMMG00000006808 ##22 LVRN (ENSMMMG00000006879) ARL14EPL (ENSMMMG00000006907) COMMD10 (ENSMMMG00000006909) SEMA6A (ENSMMMG00000006922) DTWD2 (ENSMMMG00000007345) DMXL1 (ENSMMMG00000007383) TNFAIP8 (ENSMMMG00000007959) HSD17B4 (ENSMMMG00000007973) FAM170A (ENSMMMG00000008013) PRR16 (ENSMMMG00000008040) ENSMMMG00000008047 ENSMMMG00000008053 ENSMMMG00000008077 ENSMMMG00000008124 ENSMMMG00000008137 Atlantogenata ANCESTRAL SPECIES ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Afrotheria ANCESTRAL SPECIES 73 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Tenrec MODERN SPECIES 4117 ATG12 (ENSETEG00000018837) AP3S1 (ENSETEG00000018840) ##22 Afrotheria_a ANCESTRAL SPECIES 72 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00940000162220 ENSGT00910000144204.a ENSGT00940000163833 ENSGT00940000163120 ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a Hyrax MODERN SPECIES 3425 ATG12 (ENSPCAG00000001065) AP3S1 (ENSPCAG00000001105) ##22 Elephant DUPLICATION Elephant MODERN SPECIES 2 UBE2B (ENSLAFG00000021714) CDKL3 (ENSLAFG00000011468) PPP2CA (ENSLAFG00000016840) ENSLAFG00000016832 TCF7 (ENSLAFG00000016828) VDAC1 (ENSLAFG00000028818) C5orf15 (ENSLAFG00000015697) KCNN2 (ENSLAFG00000010788) TRIM36 (ENSLAFG00000003749) PGGT1B (ENSLAFG00000003752) CCDC112 (ENSLAFG00000003761) FEM1C (ENSLAFG00000005712) TMED7 (ENSLAFG00000032184) CDO1 (ENSLAFG00000015304) ATG12 (ENSLAFG00000015307) ENSLAFG00000015311 ##22 LVRN (ENSLAFG00000002068) ARL14EPL (ENSLAFG00000032735) COMMD10 (ENSLAFG00000011885) ENSLAFG00000027553 SEMA6A (ENSLAFG00000004387) ENSLAFG00000031957 DTWD2 (ENSLAFG00000011843) DMXL1 (ENSLAFG00000015811) TNFAIP8 (ENSLAFG00000008078) HSD17B4 (ENSLAFG00000017053) FAM170A (ENSLAFG00000018269) ENSLAFG00000028710 PRR16 (ENSLAFG00000002441) ENSLAFG00000028219 FTMT (ENSLAFG00000028951) Elephant MODERN SPECIES 209 ENSLAFG00000029653 ENSLAFG00000028755 ENSLAFG00000026063 ENSLAFG00000031217 ENSLAFG00000011831 ENSLAFG00000004347 ENSLAFG00000016027 ENSLAFG00000030745 ENSLAFG00000027096 ENSLAFG00000028447 ENSLAFG00000004837 ENSLAFG00000028675 ENSLAFG00000031359 ENSLAFG00000025835 ENSLAFG00000008106 ENSLAFG00000027703 ##22 MRPL17 (ENSLAFG00000004834) ENSLAFG00000016034 TPP1 (ENSLAFG00000031815) ENSLAFG00000029330 ILK (ENSLAFG00000014337) RRP8 (ENSLAFG00000000112) ENSLAFG00000014318 ENSLAFG00000015385 TIMM10B (ENSLAFG00000030768) ARFIP2 (ENSLAFG00000015380) TRIM3 (ENSLAFG00000013983) HPX (ENSLAFG00000013977) APBB1 (ENSLAFG00000027099) SMPD1 (ENSLAFG00000006393) CAVIN3 (ENSLAFG00000010992) Xenarthra ANCESTRAL SPECIES 272 ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 Sloth MODERN SPECIES 3769 ATG12 (ENSCHOG00000004464) ENSCHOG00000004472 ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 4494 ENSDNOG00000034840 ##22 ENSDNOG00000037270 Armadillo MODERN SPECIES 2399 ENSDNOG00000038624 YTHDC2 (ENSDNOG00000012198) KCNN2 (ENSDNOG00000037111) TRIM36 (ENSDNOG00000015714) PGGT1B (ENSDNOG00000046223) CCDC112 (ENSDNOG00000007221) FEM1C (ENSDNOG00000049374) ENSDNOG00000032124 CDO1 (ENSDNOG00000009577) ATG12 (ENSDNOG00000033112) AP3S1 (ENSDNOG00000034066) ##22 LVRN (ENSDNOG00000013988) ARL14EPL (ENSDNOG00000038611) COMMD10 (ENSDNOG00000049733) SEMA6A (ENSDNOG00000002978) Armadillo MODERN SPECIES 1121 ENSDNOG00000036008 ICAM2 (ENSDNOG00000002412) ERN1 (ENSDNOG00000009467) ENSDNOG00000045259 ##22 TEX2 (ENSDNOG00000015515) PECAM1 (ENSDNOG00000012963) MILR1 (ENSDNOG00000005695) POLG2 (ENSDNOG00000006906) ENSDNOG00000004247 CEP95 (ENSDNOG00000042222) ENSDNOG00000041286 SMURF2 (ENSDNOG00000032050) ENSDNOG00000019151 ENSDNOG00000038577 Marsupialia ANCESTRAL SPECIES 33 ENSGT00390000009492 ENSGT00500000044930 ENSGT00940000153340.A ENSGT00930000151032.A ENSGT00390000009298 ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00390000013127.b ENSGT00940000156701 ENSGT00390000010052.a ENSGT00390000002762.a.b ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.e ENSGT00390000001500 ENSGT01100000264767 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Opossum MODERN SPECIES 5 DRG2 (ENSMODG00000043079) ENSMODG00000044185 ALKBH5 (ENSMODG00000013731) LLGL1 (ENSMODG00000013727) FLII (ENSMODG00000013718) ENSMODG00000013695 TOP3A (ENSMODG00000013691) SMCR8 (ENSMODG00000025386) SHMT1 (ENSMODG00000013682) ENSMODG00000025396 ENSMODG00000045117 TICAM2 (ENSMODG00000013664) TMED7 (ENSMODG00000037786) CDO1 (ENSMODG00000013657) ATG12 (ENSMODG00000013648) AP3S1 (ENSMODG00000013641) ##22 ENSMODG00000013633 ENSMODG00000025398 COMMD10 (ENSMODG00000013618) ENSMODG00000047696 SEMA6A (ENSMODG00000013614) DTWD2 (ENSMODG00000050881) DMXL1 (ENSMODG00000013559) ENSMODG00000013541 ENSMODG00000046220 HSD17B4 (ENSMODG00000013536) ENSMODG00000048225 ENSMODG00000046927 PRR16 (ENSMODG00000013488) SRFBP1 (ENSMODG00000013487) LOX (ENSMODG00000013484) Marsupialia_b ANCESTRAL SPECIES 18 ENSGT00390000009492 ENSGT00500000044930 ENSGT00940000153340.A ENSGT00930000151032.A ENSGT00390000009298 ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00390000013127.b ENSGT00940000156701 ENSGT00390000010052.a ENSGT00390000002762.a.b ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.e ENSGT00390000001500 ENSGT01100000264767 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Tasmanian devil MODERN SPECIES ATPAF2 (ENSSHAG00000021145) ENSSHAG00000021494 DRG2 (ENSSHAG00000007699) MYO15A (ENSSHAG00000005840) ALKBH5 (ENSSHAG00000023736) LLGL1 (ENSSHAG00000000975) FLII (ENSSHAG00000002329) MIEF2 (ENSSHAG00000025859) TOP3A (ENSSHAG00000002971) SMCR8 (ENSSHAG00000000232) ENSSHAG00000023093 ENSSHAG00000023315 ENSSHAG00000023013 ENSSHAG00000030975 ENSSHAG00000004165 AP3S1 (ENSSHAG00000001176) ##22 ENSSHAG00000003422 ENSSHAG00000002874 COMMD10 (ENSSHAG00000028776) ENSSHAG00000029189 SEMA6A (ENSSHAG00000011213) DTWD2 (ENSSHAG00000006690) DMXL1 (ENSSHAG00000003035) TNFAIP8 (ENSSHAG00000007788) HSD17B4 (ENSSHAG00000005224) ENSSHAG00000025921 PRR16 (ENSSHAG00000024340) ENSSHAG00000028557 SRFBP1 (ENSSHAG00000020966) LOX (ENSSHAG00000028534) ENSSHAG00000015432 Diprotodontia ANCESTRAL SPECIES 14 ENSGT00390000009492 ENSGT00500000044930 ENSGT00940000153340.A ENSGT00930000151032.A ENSGT00390000009298 ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00390000013127.b ENSGT00940000156701 ENSGT00390000010052.a ENSGT00390000002762.a.b ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.e ENSGT00390000001500 ENSGT01100000264767 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Wallaby MODERN SPECIES 8560 ENSMEUG00000010623 ##22 Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT00390000009492 ENSGT00500000044930 ENSGT00940000153340.A ENSGT00930000151032.A ENSGT00390000009298 ENSGT00950000182906.a.a.a ENSGT00940000156643 ENSGT00390000013127.b ENSGT00940000156701 ENSGT00390000010052.a ENSGT00390000002762.a.b ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347.e ENSGT00390000001500 ENSGT01100000264767 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Common wonbat MODERN SPECIES 1043 ATPAF2 (ENSVURG00010010122) GID4 (ENSVURG00010010131) DRG2 (ENSVURG00010010140) ENSVURG00010010164 ALKBH5 (ENSVURG00010010197) LLGL1 (ENSVURG00010010219) FLII (ENSVURG00010010288) MIEF2 (ENSVURG00010010325) TOP3A (ENSVURG00010010334) SMCR8 (ENSVURG00010010376) SHMT1 (ENSVURG00010010383) ENSVURG00010010392 TMED7 (ENSVURG00010010397) CDO1 (ENSVURG00010010405) ATG12 (ENSVURG00010010412) AP3S1 (ENSVURG00010010420) ##22 LVRN (ENSVURG00010010448) ARL14EPL (ENSVURG00010010501) COMMD10 (ENSVURG00010010528) ENSVURG00010010548 SEMA6A (ENSVURG00010010569) ENSVURG00010010599 ENSVURG00010010642 ENSVURG00010010654 DTWD2 (ENSVURG00010010691) DMXL1 (ENSVURG00010010777) TNFAIP8 (ENSVURG00010011274) HSD17B4 (ENSVURG00010011297) PRR16 (ENSVURG00010011319) ENSVURG00010011332 SRFBP1 (ENSVURG00010011339) koala MODERN SPECIES 174 ATPAF2 (ENSPCIG00000027362) GID4 (ENSPCIG00000027361) DRG2 (ENSPCIG00000027360) ENSPCIG00000032854 ALKBH5 (ENSPCIG00000001861) LLGL1 (ENSPCIG00000002129) FLII (ENSPCIG00000013455) ENSPCIG00000013454 TOP3A (ENSPCIG00000013453) SMCR8 (ENSPCIG00000013452) SHMT1 (ENSPCIG00000013451) ENSPCIG00000030884 TMED7 (ENSPCIG00000036668) CDO1 (ENSPCIG00000013447) ENSPCIG00000013446 AP3S1 (ENSPCIG00000013443) ##22 ENSPCIG00000028580 ENSPCIG00000028579 COMMD10 (ENSPCIG00000028578) ENSPCIG00000028577 SEMA6A (ENSPCIG00000028576) Sauria ANCESTRAL SPECIES 5 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 tuatara DUPLICATION tuatara MODERN SPECIES 231 TRIM36 (ENSSPUG00000017630) PGGT1B (ENSSPUG00000017623) ENSSPUG00000017617 CCDC112 (ENSSPUG00000017588) FEM1C (ENSSPUG00000017578) ENSSPUG00000017571 TMED7 (ENSSPUG00000017566) CDO1 (ENSSPUG00000017401) ATG12 (ENSSPUG00000017346) ENSSPUG00000017334 ##22 tuatara MODERN SPECIES 1814 ENSSPUG00000003440 ENSSPUG00000003434 CASP10 (ENSSPUG00000003417) CFLAR (ENSSPUG00000003396) NDUFB3 (ENSSPUG00000003387) HYCC2 (ENSSPUG00000003211) ORC2 (ENSSPUG00000003152) NIF3L1 (ENSSPUG00000003130) PPIL3 (ENSSPUG00000003113) CLK1 (ENSSPUG00000003057) BZW1 (ENSSPUG00000003041) ENSSPUG00000002295 ENSSPUG00000001860 ENSSPUG00000001654 KCTD18 (ENSSPUG00000001600) ENSSPUG00000001587 ##22 SPATS2L (ENSSPUG00000001564) MAIP1 (ENSSPUG00000001474) TYW5 (ENSSPUG00000001453) C2orf69 (ENSSPUG00000001446) FTCDNL1 (ENSSPUG00000001397) SATB2 (ENSSPUG00000001263) Episquamata ANCESTRAL SPECIES 6 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Laterata ANCESTRAL SPECIES 8 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565.w ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00390000001280.b Argentine black and white tegu MODERN SPECIES 64 ENSSMRG00000002718 DCP2 (ENSSMRG00000002719) MCC (ENSSMRG00000002737) YTHDC2 (ENSSMRG00000002738) KCNN2 (ENSSMRG00000002827) ENSSMRG00000002834 TRIM36 (ENSSMRG00000002840) PGGT1B (ENSSMRG00000002870) CCDC112 (ENSSMRG00000002874) FEM1C (ENSSMRG00000002883) ENSSMRG00000002904 TMED7 (ENSSMRG00000002906) ENSSMRG00000002912 CDO1 (ENSSMRG00000002915) ATG12 (ENSSMRG00000002928) AP3S1 (ENSSMRG00000002936) ##22 LVRN (ENSSMRG00000002952) ARL14EPL (ENSSMRG00000002964) COMMD10 (ENSSMRG00000002982) ENSSMRG00000003007 Common wall lizard MODERN SPECIES 2 DCP2 (ENSPMRG00000011931) MCC (ENSPMRG00000011941) ENSPMRG00000011948 YTHDC2 (ENSPMRG00000011953) KCNN2 (ENSPMRG00000011992) ENSPMRG00000012003 ENSPMRG00000012005 TRIM36 (ENSPMRG00000012010) PGGT1B (ENSPMRG00000012032) CCDC112 (ENSPMRG00000012041) FEM1C (ENSPMRG00000012051) ENSPMRG00000012053 TMED7 (ENSPMRG00000012055) ENSPMRG00000012056 CDO1 (ENSPMRG00000012060) AP3S1 (ENSPMRG00000012067) ##22 ATG12 (ENSPMRG00000012074) ENSPMRG00000012078 LVRN (ENSPMRG00000012080) ARL14EPL (ENSPMRG00000012088) COMMD10 (ENSPMRG00000012091) SEMA6A (ENSPMRG00000012100) ENSPMRG00000012135 ENSPMRG00000012137 DTWD2 (ENSPMRG00000012140) DMXL1 (ENSPMRG00000012477) HSD17B4 (ENSPMRG00000015361) ENSPMRG00000015400 PRR16 (ENSPMRG00000015405) SRFBP1 (ENSPMRG00000015411) LOX (ENSPMRG00000015428) Toxicofera ANCESTRAL SPECIES 6 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Lizard MODERN SPECIES 807 REEP5 (ENSACAG00000039689) DCP2 (ENSACAG00000007587) MCC (ENSACAG00000007653) YTHDC2 (ENSACAG00000007754) KCNN2 (ENSACAG00000007809) ENSACAG00000039460 TRIM36 (ENSACAG00000007939) ENSACAG00000044588 PGGT1B (ENSACAG00000007988) CCDC112 (ENSACAG00000008012) FEM1C (ENSACAG00000008023) ENSACAG00000028497 TMED7 (ENSACAG00000041281) CDO1 (ENSACAG00000008057) ATG12 (ENSACAG00000036719) AP3S1 (ENSACAG00000044169) ##22 LVRN (ENSACAG00000008112) ARL14EPL (ENSACAG00000034683) COMMD10 (ENSACAG00000008166) ENSACAG00000039734 SEMA6A (ENSACAG00000008169) ENSACAG00000040895 ENSACAG00000041614 ENSACAG00000037277 ENSACAG00000037495 DTWD2 (ENSACAG00000040130) ENSACAG00000044514 DMXL1 (ENSACAG00000004113) ENSACAG00000044545 TNFAIP8 (ENSACAG00000003983) HSD17B4 (ENSACAG00000003796) Elapidae ANCESTRAL SPECIES 7 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878.i ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626.a ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000134.b.lb.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 Indian cobra MODERN SPECIES 1 REEP5 (ENSNNAG00000002238) ENSNNAG00000002233 ENSNNAG00000002230 MCC (ENSNNAG00000002151) ENSNNAG00000002132 YTHDC2 (ENSNNAG00000002091) KCNN2 (ENSNNAG00000002059) TRIM36 (ENSNNAG00000002043) PGGT1B (ENSNNAG00000002032) CCDC112 (ENSNNAG00000002017) FEM1C (ENSNNAG00000002007) ENSNNAG00000002001 TMED7 (ENSNNAG00000001995) CDO1 (ENSNNAG00000001985) ATG12 (ENSNNAG00000001976) AP3S1 (ENSNNAG00000001962) ##22 LVRN (ENSNNAG00000001850) ARL14EPL (ENSNNAG00000001803) COMMD10 (ENSNNAG00000001787) ENSNNAG00000001779 ENSNNAG00000001752 ENSNNAG00000001738 DTWD2 (ENSNNAG00000001723) DMXL1 (ENSNNAG00000001609) TNFAIP8 (ENSNNAG00000001550) HSD17B4 (ENSNNAG00000001529) PRR16 (ENSNNAG00000001516) SRFBP1 (ENSNNAG00000001507) LOX (ENSNNAG00000001498) ENSNNAG00000001489 ENSNNAG00000001479 Elapidae_a ANCESTRAL SPECIES 9 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878.i ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626.a ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000134.b.lb.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 Blue-lipped sea krait MODERN SPECIES 5313 ATG12 (ENSLLTG00000007268) AP3S1 (ENSLLTG00000007298) ##22 LVRN (ENSLLTG00000007346) Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878.i ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626.a ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000134.b.lb.b ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 Mainland tiger snake MODERN SPECIES 1 ENSNSUG00000013150 SRP19 (ENSNSUG00000013151) REEP5 (ENSNSUG00000013152) DCP2 (ENSNSUG00000013153) MCC (ENSNSUG00000013232) YTHDC2 (ENSNSUG00000013233) KCNN2 (ENSNSUG00000013234) TRIM36 (ENSNSUG00000013235) PGGT1B (ENSNSUG00000013245) CCDC112 (ENSNSUG00000013247) FEM1C (ENSNSUG00000013249) ENSNSUG00000013251 TMED7 (ENSNSUG00000013252) CDO1 (ENSNSUG00000013254) ATG12 (ENSNSUG00000013255) AP3S1 (ENSNSUG00000013256) ##22 LVRN (ENSNSUG00000013259) ARL14EPL (ENSNSUG00000013302) COMMD10 (ENSNSUG00000013304) SEMA6A (ENSNSUG00000013310) ENSNSUG00000013520 DTWD2 (ENSNSUG00000013522) DMXL1 (ENSNSUG00000013525) TNFAIP8 (ENSNSUG00000013549) HSD17B4 (ENSNSUG00000013550) ENSNSUG00000013551 ENSNSUG00000013552 PRR16 (ENSNSUG00000013553) SRFBP1 (ENSNSUG00000013554) LOX (ENSNSUG00000013555) ENSNSUG00000013556 Eastern brown snake MODERN SPECIES 2 APC (ENSPTXG00000000156) SRP19 (ENSPTXG00000000175) REEP5 (ENSPTXG00000000196) DCP2 (ENSPTXG00000000210) MCC (ENSPTXG00000000290) YTHDC2 (ENSPTXG00000000857) KCNN2 (ENSPTXG00000001321) TRIM36 (ENSPTXG00000001322) PGGT1B (ENSPTXG00000001323) ENSPTXG00000001328 FEM1C (ENSPTXG00000001332) ENSPTXG00000001335 TMED7 (ENSPTXG00000001338) CDO1 (ENSPTXG00000001339) ATG12 (ENSPTXG00000001341) AP3S1 (ENSPTXG00000001345) ##22 LVRN (ENSPTXG00000001347) ARL14EPL (ENSPTXG00000001350) COMMD10 (ENSPTXG00000001404) SEMA6A (ENSPTXG00000001406) ENSPTXG00000001410 DTWD2 (ENSPTXG00000001411) DMXL1 (ENSPTXG00000001471) TNFAIP8 (ENSPTXG00000001760) HSD17B4 (ENSPTXG00000001761) PRR16 (ENSPTXG00000001762) SRFBP1 (ENSPTXG00000001763) LOX (ENSPTXG00000001765) ENSPTXG00000001766 ENSPTXG00000001767 SNCAIP (ENSPTXG00000001768) Archelosauria ANCESTRAL SPECIES 7 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 Archosauria ANCESTRAL SPECIES 1 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Australian saltwater crocodile MODERN SPECIES 67 FOCAD (ENSCPRG00005000175) HACD4 (ENSCPRG00005015566) ENSCPRG00005015564 MTAP (ENSCPRG00005015561) ENSCPRG00005015560 ENSCPRG00005015559 CDKN2B (ENSCPRG00005015556) TRIM36 (ENSCPRG00005015549) PGGT1B (ENSCPRG00005015545) CCDC112 (ENSCPRG00005015544) FEM1C (ENSCPRG00005015542) ENSCPRG00005015541 TMED7 (ENSCPRG00005015538) CDO1 (ENSCPRG00005015535) ATG12 (ENSCPRG00005015533) AP3S1 (ENSCPRG00005015530) ##22 LVRN (ENSCPRG00005015523) ARL14EPL (ENSCPRG00005015521) ENSCPRG00005015517 COMMD10 (ENSCPRG00005015514) SEMA6A (ENSCPRG00005015501) DTWD2 (ENSCPRG00005015495) DMXL1 (ENSCPRG00005015478) TNFAIP8 (ENSCPRG00005015471) HSD17B4 (ENSCPRG00005015460) PRR16 (ENSCPRG00005015453) ENSCPRG00005015446 NDUFB6 (ENSCPRG00005015444) ENSCPRG00005015442 TOPORS (ENSCPRG00005015440) RIGI (ENSCPRG00005015434) Aves ANCESTRAL SPECIES 4 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 African ostrich MODERN SPECIES 994 STARD4 (ENSSCUG00000018587) ENSSCUG00000018588 EPB41L4A (ENSSCUG00000018591) APC (ENSSCUG00000018600) SRP19 (ENSSCUG00000018603) REEP5 (ENSSCUG00000018604) DCP2 (ENSSCUG00000018605) MCC (ENSSCUG00000018607) YTHDC2 (ENSSCUG00000018608) KCNN2 (ENSSCUG00000018616) TRIM36 (ENSSCUG00000018622) PGGT1B (ENSSCUG00000018624) CCDC112 (ENSSCUG00000018627) FEM1C (ENSSCUG00000018628) TMED7 (ENSSCUG00000018632) AP3S1 (ENSSCUG00000018633) ##22 CDO1 (ENSSCUG00000018636) ATG12 (ENSSCUG00000018637) LVRN (ENSSCUG00000018639) ARL14EPL (ENSSCUG00000018641) COMMD10 (ENSSCUG00000018642) Neognathae ANCESTRAL SPECIES 19 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00940000163078.c ENSGT00940000163078.d ENSGT00950000182991.B ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000155771 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Galloanserae ANCESTRAL SPECIES 18 ENSGT00940000159492 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00940000163078.c ENSGT00940000163078.d ENSGT00950000182991.B ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Anatidae ANCESTRAL SPECIES 12 ENSGT00940000159492 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00940000163078.c ENSGT00940000163078.d ENSGT00950000182991.B ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000158463.i ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Pink-footed goose MODERN SPECIES 239 CDO1 (ENSABRG00000013856) AP3S1 (ENSABRG00000013849) ##22 LVRN (ENSABRG00000013755) ARL14EPL (ENSABRG00000013742) COMMD10 (ENSABRG00000013735) SEMA6A (ENSABRG00000013684) Duck MODERN SPECIES 4281 ACO1 (ENSAPLG00000015490) RIGI (ENSAPLG00000015091) ENSAPLG00000026699 ENSAPLG00000023995 MTAP (ENSAPLG00000015767) CARTPT (ENSAPLG00000024632) MCCC2 (ENSAPLG00000011286) ENSAPLG00000011140 ENSAPLG00000024276 ENSAPLG00000010912 ENSAPLG00000010495 MARVELD2 (ENSAPLG00000023851) TMED7 (ENSAPLG00000029546) CDO1 (ENSAPLG00000013485) ATG12 (ENSAPLG00000017775) AP3S1 (ENSAPLG00000013535) ##22 LVRN (ENSAPLG00000013734) ARL14EPL (ENSAPLG00000025988) ENSAPLG00000029318 COMMD10 (ENSAPLG00000025560) SEMA6A (ENSAPLG00000014502) DTWD2 (ENSAPLG00000009218) DMXL1 (ENSAPLG00000009280) TNFAIP8 (ENSAPLG00000001924) HSD17B4 (ENSAPLG00000009938) PRR16 (ENSAPLG00000007951) ENSAPLG00000021766 SRFBP1 (ENSAPLG00000003938) LOX (ENSAPLG00000003826) ENSAPLG00000024534 ENSAPLG00000015169 Phasianidae ANCESTRAL SPECIES 5 ENSGT00950000183128.A ENSGT00940000158373 ENSGT00940000163078.c ENSGT00950000182991.B ENSGT00950000182904.a.b.a ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000155771 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000157772 ENSGT00940000159492 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 Japanese quail MODERN SPECIES 699 ENSCJPG00005006022 MTAP (ENSCJPG00005006019) CDKN2A (ENSCJPG00005006016) KCNN2 (ENSCJPG00005006004) ENSCJPG00005006003 ENSCJPG00005006001 CARTPT (ENSCJPG00005006000) MCCC2 (ENSCJPG00005005998) ENSCJPG00005005992 ENSCJPG00005005991 ENSCJPG00005005958 MARVELD2 (ENSCJPG00005005956) TMED7 (ENSCJPG00005005955) CDO1 (ENSCJPG00005005949) ATG12 (ENSCJPG00005005945) AP3S1 (ENSCJPG00005005943) ##22 LVRN (ENSCJPG00005005926) ARL14EPL (ENSCJPG00005005918) COMMD10 (ENSCJPG00005005910) SEMA6A (ENSCJPG00005005875) DTWD2 (ENSCJPG00005005797) DMXL1 (ENSCJPG00005003797) TNFAIP8 (ENSCJPG00005003787) HSD17B4 (ENSCJPG00005003785) PRR16 (ENSCJPG00005003778) ENSCJPG00005003751 ACO1 (ENSCJPG00005003748) DGKQ (ENSCJPG00005003742) TDRD7 (ENSCJPG00005003726) TMOD1 (ENSCJPG00005003724) TSTD2 (ENSCJPG00005003718) Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00950000183128.A ENSGT00940000158373 ENSGT00940000163078.c ENSGT00950000182991.B ENSGT00950000182904.a.b.a ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000155771 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000157772 ENSGT00940000159492 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 Chicken MODERN SPECIES 131 ENSGALG00010009074 ENSGALG00010008070 ENSGALG00010008089 KCNN2 (ENSGALG00010009198) ENSGALG00010009178 CARTPT (ENSGALG00010009162) MCCC2 (ENSGALG00010009143) ENSGALG00010009457 ENSGALG00010009446 SMN (ENSGALG00010009431) GTF2H2 (ENSGALG00010009408) MARVELD2 (ENSGALG00010009393) TMED7 (ENSGALG00010009388) CDO1 (ENSGALG00010009376) ATG12 (ENSGALG00010009120) AP3S1 (ENSGALG00010009103) ##22 LVRN (ENSGALG00010008956) ARL14EPL (ENSGALG00010009084) COMMD10 (ENSGALG00010008234) SEMA6A (ENSGALG00010008179) DTWD2 (ENSGALG00010009236) DMXL1 (ENSGALG00010009367) TNFAIP8 (ENSGALG00010009360) HSD17B4 (ENSGALG00010009280) ENSGALG00010009734 PRR16 (ENSGALG00010009726) ENSGALG00010009716 ENSGALG00010009701 ENSGALG00010009685 ACO1 (ENSGALG00010009676) DGKQ (ENSGALG00010009665) Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00940000163078.c ENSGT00940000163078.d ENSGT00950000182991.B ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000155771 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000159492 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00940000163078.c ENSGT00940000163078.d ENSGT00950000182991.B ENSGT00390000018319.a.b.a ENSGT00940000155949 ENSGT00390000012762.h ENSGT00940000161793 ENSGT00940000153352.A ENSGT00490000043395 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Golden eagle MODERN SPECIES 91 MTAP (ENSACCG00020013200) CARTPT (ENSACCG00020013221) MCCC2 (ENSACCG00020013249) ENSACCG00020013319 ENSACCG00020013403 ENSACCG00020013422 ENSACCG00020013434 ENSACCG00020013453 ENSACCG00020013472 ENSACCG00020013516 MARVELD2 (ENSACCG00020013548) ENSACCG00020013568 TMED7 (ENSACCG00020013584) CDO1 (ENSACCG00020013599) ATG12 (ENSACCG00020013613) AP3S1 (ENSACCG00020013636) ##22 LVRN (ENSACCG00020013691) ARL14EPL (ENSACCG00020013727) COMMD10 (ENSACCG00020013738) SEMA6A (ENSACCG00020013766) DTWD2 (ENSACCG00020013814) DMXL1 (ENSACCG00020014442) TNFAIP8 (ENSACCG00020014874) HSD17B4 (ENSACCG00020014899) PRR16 (ENSACCG00020014916) ENSACCG00020014926 SRFBP1 (ENSACCG00020014944) LOX (ENSACCG00020014978) ENSACCG00020015001 ENSACCG00020015011 SNCAIP (ENSACCG00020015035) Kakapo MODERN SPECIES 19 ACO1 (ENSSHBG00005019407) RIGI (ENSSHBG00005019402) ENSSHBG00005019398 ENSSHBG00005019396 MTAP (ENSSHBG00005019394) CARTPT (ENSSHBG00005019393) MCCC2 (ENSSHBG00005019390) ENSSHBG00005019384 ENSSHBG00005019381 ENSSHBG00005019377 ENSSHBG00005019368 MARVELD2 (ENSSHBG00005019362) ENSSHBG00005019359 CDO1 (ENSSHBG00005019341) ATG12 (ENSSHBG00005019337) AP3S1 (ENSSHBG00005019334) ##22 LVRN (ENSSHBG00005019325) ARL14EPL (ENSSHBG00005019316) COMMD10 (ENSSHBG00005019312) SEMA6A (ENSSHBG00005019292) ENSSHBG00005019285 DTWD2 (ENSSHBG00005019284) DMXL1 (ENSSHBG00005011471) TNFAIP8 (ENSSHBG00005009903) HSD17B4 (ENSSHBG00005009890) PRR16 (ENSSHBG00005009872) SRFBP1 (ENSSHBG00005009842) LOX (ENSSHBG00005009825) ENSSHBG00005009811 ENSSHBG00005009803 SNCAIP (ENSSHBG00005009782) Passeriformes ANCESTRAL SPECIES 45 ENSGT00390000001455 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Great tit MODERN SPECIES 642 ENSPMJG00000005344 INIP (ENSPMJG00000005345) SNX30 (ENSPMJG00000005351) SLC46A2 (ENSPMJG00000005355) ENSPMJG00000005383 CHD1 (ENSPMJG00000005411) RGMB (ENSPMJG00000005412) ENSPMJG00000005414 ENSPMJG00000005415 CCNH (ENSPMJG00000005416) RASA1 (ENSPMJG00000005417) RFESD (ENSPMJG00000005422) CDO1 (ENSPMJG00000005453) ATG12 (ENSPMJG00000005454) ENSPMJG00000005455 AP3S1 (ENSPMJG00000005456) ##22 LVRN (ENSPMJG00000005457) ARL14EPL (ENSPMJG00000005460) COMMD10 (ENSPMJG00000005476) SEMA6A (ENSPMJG00000005483) DTWD2 (ENSPMJG00000005505) DMXL1 (ENSPMJG00000005508) TNFAIP8 (ENSPMJG00000005515) HSD17B4 (ENSPMJG00000005532) PRR16 (ENSPMJG00000005559) SRFBP1 (ENSPMJG00000005571) LOX (ENSPMJG00000005577) ENSPMJG00000005581 SNCAIP (ENSPMJG00000005584) SNX2 (ENSPMJG00000005601) ENSPMJG00000005618 Passeriformes_d ANCESTRAL SPECIES 41 ENSGT00390000001455 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Flycatcher MODERN SPECIES 257 ENSFALG00000028928 LSM5 (ENSFALG00000025500) TMED7 (ENSFALG00000028806) CDO1 (ENSFALG00000001887) ATG12 (ENSFALG00000026589) AP3S1 (ENSFALG00000026881) ##22 LVRN (ENSFALG00000001876) ENSFALG00000027912 ARL14EPL (ENSFALG00000001872) COMMD10 (ENSFALG00000023779) SEMA6A (ENSFALG00000001857) Passeriformes_g ANCESTRAL SPECIES 49 ENSGT00390000001455 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Medium ground finch MODERN SPECIES 316 LSM5 (ENSGFOG00000008813) ENSGFOG00000008821 CDO1 (ENSGFOG00000008827) ATG12 (ENSGFOG00000008877) AP3S1 (ENSGFOG00000008884) ##22 LVRN (ENSGFOG00000008893) ARL14EPL (ENSGFOG00000008900) COMMD10 (ENSGFOG00000008901) SEMA6A (ENSGFOG00000008913) Passeroidea ANCESTRAL SPECIES 48 ENSGT00950000182988.a.b.b.a.a ENSGT00390000001455 ENSGT00940000158463.j ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 Zebra finch MODERN SPECIES 104 ENSTGUG00000014992 RIOK2 (ENSTGUG00000001223) ENSTGUG00000006787 CHD1 (ENSTGUG00000001185) ENSTGUG00000022248 RGMB (ENSTGUG00000001184) RASA1 (ENSTGUG00000001169) CCNH (ENSTGUG00000001165) ENSTGUG00000029541 ENSTGUG00000028878 ENSTGUG00000017537 LSM5 (ENSTGUG00000027997) TMED7 (ENSTGUG00000023578) CDO1 (ENSTGUG00000023603) ATG12 (ENSTGUG00000028755) AP3S1 (ENSTGUG00000024128) ##22 ARL14EPL (ENSTGUG00000017544) COMMD10 (ENSTGUG00000025033) SEMA6A (ENSTGUG00000017547) ENSTGUG00000023019 DTWD2 (ENSTGUG00000025374) DMXL1 (ENSTGUG00000017551) TNFAIP8 (ENSTGUG00000017552) HSD17B4 (ENSTGUG00000001154) PRR16 (ENSTGUG00000001152) SRFBP1 (ENSTGUG00000021782) LOX (ENSTGUG00000025970) ENSTGUG00000001143 SNCAIP (ENSTGUG00000001137) SNX2 (ENSTGUG00000001125) PPIC (ENSTGUG00000001116) Common canary MODERN SPECIES 40 ENSSCAG00000005421 LSM5 (ENSSCAG00000005419) ENSSCAG00000005417 CDO1 (ENSSCAG00000005413) ATG12 (ENSSCAG00000005410) AP3S1 (ENSSCAG00000005408) ##22 LVRN (ENSSCAG00000005393) ARL14EPL (ENSSCAG00000005386) COMMD10 (ENSSCAG00000005381) SEMA6A (ENSSCAG00000005315) ENSSCAG00000005295 DTWD2 (ENSSCAG00000005293) DMXL1 (ENSSCAG00000005285) TNFAIP8 (ENSSCAG00000005279) HSD17B4 (ENSSCAG00000005251) PRR16 (ENSSCAG00000005241) SRFBP1 (ENSSCAG00000005236) LOX (ENSSCAG00000005233) ENSSCAG00000005228 ENSSCAG00000005227 SNCAIP (ENSSCAG00000005224) Cryptodira ANCESTRAL SPECIES 9 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 Chinese turtle MODERN SPECIES 1977 REEP5 (ENSPSIG00000013836) DCP2 (ENSPSIG00000014210) MCC (ENSPSIG00000014219) ENSPSIG00000014610 YTHDC2 (ENSPSIG00000014798) KCNN2 (ENSPSIG00000015781) ENSPSIG00000000009 TRIM36 (ENSPSIG00000016280) PGGT1B (ENSPSIG00000016530) CCDC112 (ENSPSIG00000016871) FEM1C (ENSPSIG00000016984) ENSPSIG00000017006 TMED7 (ENSPSIG00000017016) CDO1 (ENSPSIG00000017239) ATG12 (ENSPSIG00000017272) AP3S1 (ENSPSIG00000017276) ##22 LVRN (ENSPSIG00000017294) ENSPSIG00000017635 COMMD10 (ENSPSIG00000017640) SEMA6A (ENSPSIG00000017844) ENSPSIG00000017870 DTWD2 (ENSPSIG00000017880) DMXL1 (ENSPSIG00000017888) TNFAIP8 (ENSPSIG00000017956) HSD17B4 (ENSPSIG00000017960) Testudinoidea ANCESTRAL SPECIES 7 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00940000177613 ENSGT00390000001485 Testudinidae ANCESTRAL SPECIES 15 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000001189.b.f ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00530000064208.b ENSGT00390000001485 Goode s thornscrub tortoise MODERN SPECIES 20 APC (ENSGEVG00005001253) SRP19 (ENSGEVG00005001173) REEP5 (ENSGEVG00005001130) DCP2 (ENSGEVG00005001099) MCC (ENSGEVG00005000907) YTHDC2 (ENSGEVG00005000730) KCNN2 (ENSGEVG00005011408) TRIM36 (ENSGEVG00005011298) PGGT1B (ENSGEVG00005011252) CCDC112 (ENSGEVG00005011097) FEM1C (ENSGEVG00005011043) ENSGEVG00005011027 TMED7 (ENSGEVG00005010935) CDO1 (ENSGEVG00005010878) ATG12 (ENSGEVG00005010847) AP3S1 (ENSGEVG00005010766) ##22 LVRN (ENSGEVG00005010595) ARL14EPL (ENSGEVG00005010537) COMMD10 (ENSGEVG00005010479) SEMA6A (ENSGEVG00005010121) ENSGEVG00005010029 DTWD2 (ENSGEVG00005009969) DMXL1 (ENSGEVG00005009753) TNFAIP8 (ENSGEVG00005009719) HSD17B4 (ENSGEVG00005009648) ENSGEVG00005009622 PRR16 (ENSGEVG00005009592) SRFBP1 (ENSGEVG00005009571) LOX (ENSGEVG00005009459) ENSGEVG00005009399 ENSGEVG00005009355 Abingdon island giant tortoise MODERN SPECIES 1393 ENSCABG00000015645 TRIM36 (ENSCABG00000015594) PGGT1B (ENSCABG00000015588) CCDC112 (ENSCABG00000015585) FEM1C (ENSCABG00000015583) ENSCABG00000015582 TMED7 (ENSCABG00000015581) CDO1 (ENSCABG00000015580) ATG12 (ENSCABG00000015571) AP3S1 (ENSCABG00000015569) ##22 LVRN (ENSCABG00000015564) ARL14EPL (ENSCABG00000015561) COMMD10 (ENSCABG00000015560) SEMA6A (ENSCABG00000015471) Emydidae ANCESTRAL SPECIES 7 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000165590 ENSGT00940000158463 ENSGT00390000018226 ENSGT00390000016654 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00940000160347 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867.a ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a Three-toed box turtle MODERN SPECIES 29 APC (ENSTMTG00000022081) SRP19 (ENSTMTG00000022085) REEP5 (ENSTMTG00000022090) DCP2 (ENSTMTG00000022097) MCC (ENSTMTG00000022105) YTHDC2 (ENSTMTG00000022113) KCNN2 (ENSTMTG00000022127) TRIM36 (ENSTMTG00000022136) PGGT1B (ENSTMTG00000022144) CCDC112 (ENSTMTG00000022147) FEM1C (ENSTMTG00000022151) ENSTMTG00000022155 TMED7 (ENSTMTG00000022156) CDO1 (ENSTMTG00000022160) ATG12 (ENSTMTG00000022163) AP3S1 (ENSTMTG00000022164) ##22 LVRN (ENSTMTG00000022181) ARL14EPL (ENSTMTG00000022210) COMMD10 (ENSTMTG00000022218) SEMA6A (ENSTMTG00000022225) ENSTMTG00000022230 ENSTMTG00000022233 DMXL1 (ENSTMTG00000022235) TNFAIP8 (ENSTMTG00000022245) HSD17B4 (ENSTMTG00000022249) PRR16 (ENSTMTG00000022255) painted turtle MODERN SPECIES 17 GNG12 (ENSCPBG00000001480) GADD45A (ENSCPBG00000001491) ENSCPBG00000001504 WLS (ENSCPBG00000001513) ENSCPBG00000001531 RPE65 (ENSCPBG00000001561) DEPDC1 (ENSCPBG00000001578) TRIM36 (ENSCPBG00000001598) PGGT1B (ENSCPBG00000001628) CCDC112 (ENSCPBG00000001651) FEM1C (ENSCPBG00000001666) ENSCPBG00000001671 TMED7 (ENSCPBG00000001673) CDO1 (ENSCPBG00000001681) ATG12 (ENSCPBG00000001689) AP3S1 (ENSCPBG00000001702) ##22 LVRN (ENSCPBG00000001739) ARL14EPL (ENSCPBG00000001897) COMMD10 (ENSCPBG00000001906) SEMA6A (ENSCPBG00000001939) DTWD2 (ENSCPBG00000002009) DMXL1 (ENSCPBG00000002051) TNFAIP8 (ENSCPBG00000002114) HSD17B4 (ENSCPBG00000002123) ENSCPBG00000002146 ENSCPBG00000002161 ENSCPBG00000002181 ENSCPBG00000002193 ENSCPBG00000002206 ENSCPBG00000002219 ENSCPBG00000002237 Actinopterygii ANCESTRAL SPECIES 11 ENSGT01080000257410.D ENSGT01030000234535.F.b ENSGT00730000111385 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00390000001280.b ENSGT00940000159786 Neopterygii ANCESTRAL SPECIES 16 ENSGT01080000257410.D ENSGT01030000234535.F.b ENSGT00730000111385 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000018878 ENSGT00530000063974.b ENSGT00940000155826 ENSGT00950000182904.a.b.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00940000160535 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000006867 ENSGT00390000000096.a ENSGT00390000003488.a.b.b ENSGT00940000158343 ENSGT00910000144204.a ENSGT00390000006478 ENSGT00940000154779.a.b.a ENSGT00530000064208.a ENSGT00940000177613 ENSGT00390000001485 ENSGT00940000155798 ENSGT00390000001280.b Spotted gar MODERN SPECIES 658 ENSLOCG00000009080 st8sia4 (ENSLOCG00000009075) FAM174A (ENSLOCG00000009066) chd1 (ENSLOCG00000009047) reep5 (ENSLOCG00000009034) dcp2 (ENSLOCG00000009013) MCC (ENSLOCG00000009005) YTHDC2 (ENSLOCG00000009001) KCNN2 (ENSLOCG00000008989) trim36 (ENSLOCG00000008980) pggt1b (ENSLOCG00000008973) CCDC112 (ENSLOCG00000008955) fem1c (ENSLOCG00000008945) tmed7 (ENSLOCG00000008936) cdo1 (ENSLOCG00000008927) AP3S1 (ENSLOCG00000008916) ##22 LVRN (ENSLOCG00000008894) COMMD10 (ENSLOCG00000008888) sema6a (ENSLOCG00000008872) ENSLOCG00000008864 DTWD2 (ENSLOCG00000008859) DMXL1 (ENSLOCG00000008849) TNFAIP8 (ENSLOCG00000008839) hsd17b4 (ENSLOCG00000008806) prr16 (ENSLOCG00000008796) SRFBP1 (ENSLOCG00000008772) loxa (ENSLOCG00000008751) ENSLOCG00000008742 sncaip (ENSLOCG00000008733) SNX2 (ENSLOCG00000008709) snx24 (ENSLOCG00000008691) Osteoglossocephalai ANCESTRAL SPECIES 11 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000164634 ENSGT00940000160278 ENSGT00910000144252.d.a ENSGT00940000160064.b ENSGT00940000155192 ENSGT00530000064550.A ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000156980.b ENSGT00940000157592 ENSGT00940000155603.A.b.c Osteoglossiformes ANCESTRAL SPECIES 95 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000164634 ENSGT00940000164067.C ENSGT00910000144252.d.b ENSGT00940000160064.b ENSGT00940000155192 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000167760 ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000158196.b.b ENSGT00940000157592 ENSGT00940000155603.A.b.c P. kingsleyae MODERN SPECIES 31 me2 (ENSPKIG00000016910) mapk4 (ENSPKIG00000016973) tspan36 (ENSPKIG00000017013) prf1.5 (ENSPKIG00000017028) smarcad1b (ENSPKIG00000017048) atoh1a (ENSPKIG00000017085) grid2 (ENSPKIG00000017114) ENSPKIG00000017187 CCSER1 (ENSPKIG00000017203) trim36 (ENSPKIG00000017252) pggt1b (ENSPKIG00000017342) ENSPKIG00000017385 ENSPKIG00000017406 fem1c (ENSPKIG00000017443) cdo1 (ENSPKIG00000017457) AP3S1 (ENSPKIG00000017487) ##22 mfsd4b (ENSPKIG00000017571) COMMD10 (ENSPKIG00000017602) sema6a (ENSPKIG00000017662) DMXL1 (ENSPKIG00000017756) hsd17b4 (ENSPKIG00000017865) prr16 (ENSPKIG00000017969) ENSPKIG00000017989 sncaip (ENSPKIG00000018019) SNX2 (ENSPKIG00000018094) PPIC (ENSPKIG00000018208) ENSPKIG00000018230 PRDM6 (ENSPKIG00000018259) CEP120 (ENSPKIG00000018351) ZNF608 (ENSPKIG00000018458) DIRAS2 (ENSPKIG00000018480) Asian bonytongue MODERN SPECIES 8 elac1 (ENSSFOG00015020776) me2 (ENSSFOG00015020794) mapk4 (ENSSFOG00015020862) tspan36 (ENSSFOG00015020874) prf1.5 (ENSSFOG00015020893) SMARCAD1 (ENSSFOG00015020909) atoh1a (ENSSFOG00015020942) grid2 (ENSSFOG00015020956) CCSER1 (ENSSFOG00015020980) trim36 (ENSSFOG00015021007) pggt1b (ENSSFOG00015030561) ENSSFOG00015021045 fem1c (ENSSFOG00015028315) tmed7 (ENSSFOG00015021056) cdo1 (ENSSFOG00015031113) AP3S1 (ENSSFOG00015021101) ##22 COMMD10 (ENSSFOG00015021133) sema6a (ENSSFOG00015021257) DMXL1 (ENSSFOG00015021452) hsd17b4 (ENSSFOG00015021649) prr16 (ENSSFOG00015021745) ENSSFOG00015021750 sncaip (ENSSFOG00015025629) ENSSFOG00015026798 SNX2 (ENSSFOG00015021782) PPIC (ENSSFOG00015021818) PRDM6 (ENSSFOG00015021826) CEP120 (ENSSFOG00015021846) ZNF608 (ENSSFOG00015021860) NFIL3 (ENSSFOG00015021883) DIRAS2 (ENSSFOG00015031055) Clupeocephala ANCESTRAL SPECIES 4 ENSGT00390000008048 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a ENSGT01030000235745 ENSGT00940000160064.b ENSGT00940000155192 ENSGT00530000064550.A ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000156980.b ENSGT00940000155742.a.b ENSGT00940000157592 Euteleosteomorpha ANCESTRAL SPECIES 115 ENSGT00950000183089.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a ENSGT00940000160064.b ENSGT00940000155192 ENSGT00530000064550.A ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b Acanthomorphata ANCESTRAL SPECIES 13 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Cod MODERN SPECIES 19 MSH3 (ENSGMOG00000007132) ENSGMOG00000007143 CKMT2 (ENSGMOG00000007164) ENSGMOG00000007175 otpb (ENSGMOG00000025104) ENSGMOG00000007187 ENSGMOG00000022714 ENSGMOG00000007199 ENSGMOG00000007220 ENSGMOG00000007223 ENSGMOG00000007225 ENSGMOG00000007234 ENSGMOG00000007261 ENSGMOG00000036024 ENSGMOG00000007304 ENSGMOG00000007312 ##22 COMMD10 (ENSGMOG00000007318) ENSGMOG00000007329 DMXL1 (ENSGMOG00000007336) ENSGMOG00000007377 ENSGMOG00000032386 ENSGMOG00000007396 ENSGMOG00000032143 ENSGMOG00000007412 ENSGMOG00000007433 ENSGMOG00000007443 ENSGMOG00000028337 ENSGMOG00000007461 ENSGMOG00000007472 ENSGMOG00000007485 ENSGMOG00000007497 Euacanthomorphacea ANCESTRAL SPECIES 14 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Pinecone sodierfish MODERN SPECIES 23 ckmt2a (ENSMMDG00005001115) ENSMMDG00005001112 ENSMMDG00005001106 otpb (ENSMMDG00005001102) scamp1 (ENSMMDG00005001099) ENSMMDG00005022335 ENSMMDG00005022334 ENSMMDG00005022308 mrps36 (ENSMMDG00005022303) pdxp (ENSMMDG00005022302) ENSMMDG00005022301 spef2 (ENSMMDG00005022298) lifra (ENSMMDG00005022279) CEP78 (ENSMMDG00005022273) cdo1 (ENSMMDG00005022271) AP3S1 (ENSMMDG00005022269) ##22 COMMD10 (ENSMMDG00005022267) sema6a (ENSMMDG00005022151) DMXL1 (ENSMMDG00005022129) hsd17b4 (ENSMMDG00005018031) prr16 (ENSMMDG00005017926) ENSMMDG00005017924 ENSMMDG00005017919 atxn2 (ENSMMDG00005017917) mapkapk5 (ENSMMDG00005017645) ostf1 (ENSMMDG00005017638) nmrk1 (ENSMMDG00005017611) ENSMMDG00005017594 RNF122 (ENSMMDG00005017588) ENSMMDG00005017571 PLPP1 (ENSMMDG00005017503) Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Tiger tail seahorse MODERN SPECIES 67 MYORG (ENSHCOG00000004570) msh3 (ENSHCOG00000004638) rasgrf2b (ENSHCOG00000004705) ENSHCOG00000004796 otpb (ENSHCOG00000004816) scamp1 (ENSHCOG00000004850) lhfpl2b (ENSHCOG00000004860) ENSHCOG00000004874 mrps36 (ENSHCOG00000004884) pdxp (ENSHCOG00000004890) ENSHCOG00000004911 ENSHCOG00000004955 ENSHCOG00000004970 ENSHCOG00000004988 cdo1 (ENSHCOG00000005004) AP3S1 (ENSHCOG00000005009) ##22 COMMD10 (ENSHCOG00000005012) sema6a (ENSHCOG00000000134) DMXL1 (ENSHCOG00000005176) hsd17b4 (ENSHCOG00000005227) prr16 (ENSHCOG00000005235) ENSHCOG00000005244 ENSHCOG00000005251 atxn2 (ENSHCOG00000005278) mapkapk5 (ENSHCOG00000005302) ostf1 (ENSHCOG00000005327) nmrk1 (ENSHCOG00000000156) ENSHCOG00000005342 RNF122 (ENSHCOG00000005357) CSGALNACT1 (ENSHCOG00000005422) ENSHCOG00000005432 Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Eupercaria ANCESTRAL SPECIES 5 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Tetraodontidae ANCESTRAL SPECIES 12 ENSGT00940000158782.d.a ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT01000000217648 ENSGT00530000064873.b.g.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Tetraodon MODERN SPECIES 3 ENSTNIG00000001025 rasgef1ba (ENSTNIG00000016709) ENSTNIG00000000804 ENSTNIG00000016708 SLC23A2 (ENSTNIG00000016707) rassf2a (ENSTNIG00000016706) ENSTNIG00000001466 ENSTNIG00000000106 ENSTNIG00000016705 ENSTNIG00000016704 pdxp (ENSTNIG00000016703) ENSTNIG00000016702 lifra (ENSTNIG00000001809) ENSTNIG00000016701 cdo1 (ENSTNIG00000016700) AP3S1 (ENSTNIG00000016699) ##22 COMMD10 (ENSTNIG00000016698) sema6a (ENSTNIG00000016697) DMXL1 (ENSTNIG00000016696) hsd17b4 (ENSTNIG00000016695) prr16 (ENSTNIG00000016694) ENSTNIG00000000777 mapkapk5 (ENSTNIG00000016693) ostf1 (ENSTNIG00000016692) nmrk1 (ENSTNIG00000001169) ENSTNIG00000016691 RNF122 (ENSTNIG00000016690) ENSTNIG00000016689 ENSTNIG00000016688 atp5fa1 (ENSTNIG00000016687) RNF165 (ENSTNIG00000016686) Fugu MODERN SPECIES 13 tm2d2 (ENSTRUG00000016646) KCNIP3 (ENSTRUG00000016652) SLC23A2 (ENSTRUG00000016666) rassf2a (ENSTRUG00000021635) ENSTRUG00000016699 prp2 (ENSTRUG00000016701) ENSTRUG00000021560 ENSTRUG00000025467 mrps36 (ENSTRUG00000033470) pdxp (ENSTRUG00000016711) UGT3A2 (ENSTRUG00000016713) spef2 (ENSTRUG00000016716) lifra (ENSTRUG00000016730) ENSTRUG00000016733 cdo1 (ENSTRUG00000020607) AP3S1 (ENSTRUG00000016740) ##22 COMMD10 (ENSTRUG00000016749) sema6a (ENSTRUG00000016754) DMXL1 (ENSTRUG00000016763) hsd17b4 (ENSTRUG00000016777) prr16 (ENSTRUG00000028138) ENSTRUG00000016794 ENSTRUG00000027872 atxn2 (ENSTRUG00000016801) mapkapk5 (ENSTRUG00000016810) ostf1 (ENSTRUG00000016820) nmrk1 (ENSTRUG00000016823) ENSTRUG00000015821 RNF122 (ENSTRUG00000027105) ENSTRUG00000015789 ENSTRUG00000015764 Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Perciformes ANCESTRAL SPECIES 6 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Cottioidei ANCESTRAL SPECIES 11 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Lumpfish MODERN SPECIES 24 ENSCLMG00005007741 ENSCLMG00005007742 otpb (ENSCLMG00005007743) SCAMP1 (ENSCLMG00005007744) ENSCLMG00005007746 ENSCLMG00005007748 ENSCLMG00005007768 mrps36 (ENSCLMG00005007770) pdxp (ENSCLMG00005007773) ENSCLMG00005007801 ENSCLMG00005007804 ENSCLMG00005007805 ENSCLMG00005007807 ENSCLMG00005007808 cdo1 (ENSCLMG00005007809) AP3S1 (ENSCLMG00005007810) ##22 COMMD10 (ENSCLMG00005007817) SEMA6A (ENSCLMG00005007820) DMXL1 (ENSCLMG00005007828) hsd17b4 (ENSCLMG00005007985) prr16 (ENSCLMG00005011893) ENSCLMG00005011899 ENSCLMG00005011900 atxn2 (ENSCLMG00005011905) mapkapk5 (ENSCLMG00005012899) ostf1 (ENSCLMG00005013270) nmrk1 (ENSCLMG00005013352) ENSCLMG00005013353 RNF122 (ENSCLMG00005013354) CSGALNACT1 (ENSCLMG00005013355) ENSCLMG00005013356 Stickleback MODERN SPECIES 12 msh3 (ENSGACG00000005927) rasgrf2b (ENSGACG00000005945) ckmt2a (ENSGACG00000005959) ENSGACG00000005997 otpb (ENSGACG00000006004) scamp1 (ENSGACG00000006008) lhfpl2b (ENSGACG00000006024) ENSGACG00000006029 pdxp (ENSGACG00000006094) ENSGACG00000006107 spef2 (ENSGACG00000006116) lifra (ENSGACG00000006134) ENSGACG00000006139 ENSGACG00000006143 cdo1 (ENSGACG00000006149) AP3S1 (ENSGACG00000006172) ##22 COMMD10 (ENSGACG00000006209) sema6a (ENSGACG00000006212) SEMA6A (ENSGACG00000006214) DMXL1 (ENSGACG00000006220) hsd17b4 (ENSGACG00000006242) prr16 (ENSGACG00000006280) ENSGACG00000006284 SH2B3 (ENSGACG00000006289) atxn2 (ENSGACG00000006295) ENSGACG00000006305 ostf1 (ENSGACG00000006313) nmrk1 (ENSGACG00000006361) ENSGACG00000006363 ENSGACG00000006380 ENSGACG00000006389 Perciformes_a ANCESTRAL SPECIES 4 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Pike perch MODERN SPECIES 2 rasgrf2b (ENSSLUG00000019220) ENSSLUG00000019334 ckmt2a (ENSSLUG00000019339) ENSSLUG00000019349 otpb (ENSSLUG00000019355) scamp1 (ENSSLUG00000019364) ENSSLUG00000019381 ENSSLUG00000019395 mrps36 (ENSSLUG00000019599) pdxp (ENSSLUG00000019602) ENSSLUG00000019605 spef2 (ENSSLUG00000019614) ENSSLUG00000019629 ENSSLUG00000019635 cdo1 (ENSSLUG00000019640) AP3S1 (ENSSLUG00000019651) ##22 COMMD10 (ENSSLUG00000019665) ENSSLUG00000019670 sema6a (ENSSLUG00000019700) DMXL1 (ENSSLUG00000019890) hsd17b4 (ENSSLUG00000020037) ENSSLUG00000022266 prr16 (ENSSLUG00000022269) ENSSLUG00000022279 ENSSLUG00000022280 ENSSLUG00000022284 atxn2 (ENSSLUG00000022330) mapkapk5 (ENSSLUG00000022633) ostf1 (ENSSLUG00000022656) ENSSLUG00000022669 RNF122 (ENSSLUG00000022679) Channel bull blenny MODERN SPECIES 23 ckmt2a (ENSCGOG00000002876) ENSCGOG00000002872 ENSCGOG00000002869 otpb (ENSCGOG00000002852) scamp1 (ENSCGOG00000002612) ENSCGOG00000002610 ENSCGOG00000002535 ENSCGOG00000002463 mrps36 (ENSCGOG00000002452) pdxp (ENSCGOG00000002454) ENSCGOG00000002446 spef2 (ENSCGOG00000002432) lifra (ENSCGOG00000002427) ENSCGOG00000002424 cdo1 (ENSCGOG00000002420) AP3S1 (ENSCGOG00000002321) ##22 COMMD10 (ENSCGOG00000002310) sema6a (ENSCGOG00000001398) DMXL1 (ENSCGOG00000001043) hsd17b4 (ENSCGOG00000000570) prr16 (ENSCGOG00000000333) ENSCGOG00000000330 SH2B3 (ENSCGOG00000000326) atxn2 (ENSCGOG00000000299) mapkapk5 (ENSCGOG00000000254) ostf1 (ENSCGOG00000000215) nmrk1 (ENSCGOG00000000190) ENSCGOG00000000166 RNF122 (ENSCGOG00000000148) ENSCGOG00000022160 ENSCGOG00000022158 Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Gilthead seabream MODERN SPECIES 19 msh3 (ENSSAUG00010004740) rasgrf2b (ENSSAUG00010004967) ckmt2a (ENSSAUG00010005054) ENSSAUG00010005057 otpb (ENSSAUG00010005060) scamp1 (ENSSAUG00010005069) ENSSAUG00010005078 ENSSAUG00010005094 mrps36 (ENSSAUG00010005217) pdxp (ENSSAUG00010005219) ENSSAUG00010005220 spef2 (ENSSAUG00010005223) ENSSAUG00010005225 CEP78 (ENSSAUG00010005227) cdo1 (ENSSAUG00010005231) AP3S1 (ENSSAUG00010005237) ##22 COMMD10 (ENSSAUG00010005240) sema6a (ENSSAUG00010005307) DMXL1 (ENSSAUG00010007451) hsd17b4 (ENSSAUG00010007479) prr16 (ENSSAUG00010008127) ENSSAUG00010008128 ENSSAUG00010008129 atxn2 (ENSSAUG00010008135) mapkapk5 (ENSSAUG00010008143) ostf1 (ENSSAUG00010008207) nmrk1 (ENSSAUG00010008209) ENSSAUG00010008210 RNF122 (ENSSAUG00010008211) ENSSAUG00010008212 ENSSAUG00010008213 Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT01050000244968.c.d ENSGT00940000156730.a ENSGT00550000074846.jb.a Large yellow croaker MODERN SPECIES 2 ubox5 (ENSLCRG00005004828) LZTS3 (ENSLCRG00005004825) ENSLCRG00005004823 sprb (ENSLCRG00005004822) smyd1b (ENSLCRG00005004642) fabp1b.1 (ENSLCRG00005004637) oxt (ENSLCRG00005004635) ZNF366 (ENSLCRG00005004634) mrps27 (ENSLCRG00005004518) ptger4a (ENSLCRG00005004513) ENSLCRG00005004506 RNF165 (ENSLCRG00005004501) lifra (ENSLCRG00005004497) ENSLCRG00005004491 cdo1 (ENSLCRG00005004490) AP3S1 (ENSLCRG00005004465) ##22 COMMD10 (ENSLCRG00005004462) sema6a (ENSLCRG00005004291) DMXL1 (ENSLCRG00005004260) hsd17b4 (ENSLCRG00005003588) prr16 (ENSLCRG00005003567) ENSLCRG00005003566 atxn2 (ENSLCRG00005003561) mapkapk5 (ENSLCRG00005003476) ostf1 (ENSLCRG00005003469) nmrk1 (ENSLCRG00005003468) ENSLCRG00005003465 CSGALNACT1 (ENSLCRG00005003456) ENSLCRG00005003455 atp5fa1 (ENSLCRG00005003152) spef2 (ENSLCRG00005003136) European seabass MODERN SPECIES 13 ENSDLAG00005024511 MSH3 (ENSDLAG00005024340) rasgrf2b (ENSDLAG00005024104) CKMT2 (ENSDLAG00005024026) ENSDLAG00005024019 otpb (ENSDLAG00005024016) ENSDLAG00005031263 ENSDLAG00005028977 ENSDLAG00005023874 ENSDLAG00005023863 ENSDLAG00005033051 ENSDLAG00005023814 ENSDLAG00005023778 ENSDLAG00005023770 ENSDLAG00005030923 ENSDLAG00005033965 ##22 COMMD10 (ENSDLAG00005023741) ENSDLAG00005023462 DMXL1 (ENSDLAG00005022646) ENSDLAG00005020554 ENSDLAG00005020484 ENSDLAG00005031208 ENSDLAG00005020476 ENSDLAG00005019350 ENSDLAG00005018983 ENSDLAG00005029397 ENSDLAG00005018961 ENSDLAG00005018951 ENSDLAG00005018919 ENSDLAG00005018906 ENSDLAG00005018532 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 32 ENSLBEG00000016831 ENSLBEG00000016854 cdo1 (ENSLBEG00000016894) AP3S1 (ENSLBEG00000016930) ##22 COMMD10 (ENSLBEG00000016978) sema6a (ENSLBEG00000017016) DMXL1 (ENSLBEG00000017126) hsd17b4 (ENSLBEG00000017350) prr16 (ENSLBEG00000017411) ENSLBEG00000017441 ENSLBEG00000017457 atxn2 (ENSLBEG00000017484) atxn2 (ENSLBEG00000017537) mapkapk5 (ENSLBEG00000017597) ostf1 (ENSLBEG00000017703) nmrk1 (ENSLBEG00000017762) ENSLBEG00000017795 RNF122 (ENSLBEG00000017837) CSGALNACT1 (ENSLBEG00000017867) Ballan wrasse MODERN SPECIES 4299 ENSLBEG00000012185 ##22 Percomorphaceae_D DUPLICATION Percomorphaceae_D DUPLICATION Percomorphaceae_D ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.a ##22 Carangaria ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.a ##22 Carangaria_A ANCESTRAL SPECIES 6 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00970000193421.C.a.ic.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Barramundi perch MODERN SPECIES 9 CKMT2 (ENSLCAG00010004227) ENSLCAG00010004249 ENSLCAG00010004250 otpb (ENSLCAG00010004253) scamp1 (ENSLCAG00010004260) ENSLCAG00010004265 ENSLCAG00010004267 ENSLCAG00010004279 ENSLCAG00010004323 pdxp (ENSLCAG00010004328) ENSLCAG00010004333 spef2 (ENSLCAG00010004339) lifra (ENSLCAG00010004350) ENSLCAG00010004375 cdo1 (ENSLCAG00010004401) AP3S1 (ENSLCAG00010004424) ##22 COMMD10 (ENSLCAG00010004452) sema6a (ENSLCAG00010004465) DMXL1 (ENSLCAG00010004481) ENSLCAG00010004606 prr16 (ENSLCAG00010005106) ENSLCAG00010005109 ENSLCAG00010005114 atxn2 (ENSLCAG00010005130) mapkapk5 (ENSLCAG00010005187) ostf1 (ENSLCAG00010005314) nmrk1 (ENSLCAG00010005322) ENSLCAG00010005328 RNF122 (ENSLCAG00010005332) CSGALNACT1 (ENSLCAG00010005348) ENSLCAG00010005373 Pleuronectoidei ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.a ##22 Tongue sole MODERN SPECIES 397 ENSCSEG00000008701 ENSCSEG00000008711 inpp5e (ENSCSEG00000008722) pmpca (ENSCSEG00000008732) notch1b (ENSCSEG00000008775) ubac1 (ENSCSEG00000008829) ENSCSEG00000008847 pias2 (ENSCSEG00000008850) ENSCSEG00000008875 ENSCSEG00000008887 ENSCSEG00000008889 isl1a (ENSCSEG00000008907) cdo1 (ENSCSEG00000008921) ENSCSEG00000008940 ENSCSEG00000008943 AP3S1 (ENSCSEG00000008947) ##22 pdxp (ENSCSEG00000008985) scamp1 (ENSCSEG00000008991) ostf1 (ENSCSEG00000009008) mapkapk5 (ENSCSEG00000009028) ENSCSEG00000009059 atxn2 (ENSCSEG00000009072) ENSCSEG00000009192 ENSCSEG00000009202 ENSCSEG00000009211 prr16 (ENSCSEG00000009217) gadd45ga (ENSCSEG00000009227) ENSCSEG00000009257 znf131 (ENSCSEG00000009274) ENSCSEG00000009331 ENSCSEG00000009336 Anabantaria ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.a ##22 Zig-zag eel MODERN SPECIES 23 ENSMAMG00000018310 VPS13A (ENSMAMG00000018333) GNA14 (ENSMAMG00000018474) ENSMAMG00000026659 WDR31 (ENSMAMG00000028723) ENSMAMG00000018512 STPG2 (ENSMAMG00000018518) UNC5C (ENSMAMG00000018531) bmpr1ba (ENSMAMG00000018564) pdlim5a (ENSMAMG00000018603) opn4xb (ENSMAMG00000018631) ENSMAMG00000018711 ENSMAMG00000018718 ENSMAMG00000018764 ENSMAMG00000018788 ENSMAMG00000018803 ##22 COMMD10 (ENSMAMG00000018834) SEMA6A (ENSMAMG00000018861) DMXL1 (ENSMAMG00000018934) ENSMAMG00000019029 ENSMAMG00000019106 ENSMAMG00000019128 ENSMAMG00000019138 ENSMAMG00000019160 ENSMAMG00000019197 ENSMAMG00000019233 ENSMAMG00000019260 ENSMAMG00000019269 ENSMAMG00000019274 ENSMAMG00000019283 ENSMAMG00000019344 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.b ##22 Anabantaria ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.b ##22 Anabantoidei ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.b ##22 Siamese fighting fish MODERN SPECIES 20 ENSBSLG00000006771 otpb (ENSBSLG00000006744) scamp1 (ENSBSLG00000006705) ENSBSLG00000006694 ENSBSLG00000006641 mrps36 (ENSBSLG00000006598) pdxp (ENSBSLG00000006571) ENSBSLG00000006545 ENSBSLG00000006531 ENSBSLG00000006439 ENSBSLG00000006397 spef2 (ENSBSLG00000005442) lifra (ENSBSLG00000005055) ENSBSLG00000004983 cdo1 (ENSBSLG00000004951) AP3S1 (ENSBSLG00000004838) ##22 COMMD10 (ENSBSLG00000004760) sema6a (ENSBSLG00000004199) DMXL1 (ENSBSLG00000004050) hsd17b4 (ENSBSLG00000003850) prr16 (ENSBSLG00000003577) ENSBSLG00000003047 SH2B3 (ENSBSLG00000003046) atxn2 (ENSBSLG00000002491) mapkapk5 (ENSBSLG00000001962) ostf1 (ENSBSLG00000001956) nmrk1 (ENSBSLG00000001952) ENSBSLG00000001948 RNF122 (ENSBSLG00000001943) CSGALNACT1 (ENSBSLG00000001925) ENSBSLG00000001919 Carangaria ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.b ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00970000193421.C.a.ic.b ##22 Tongue sole MODERN SPECIES 398 MALT1 (ENSCSEG00000018777) msh3 (ENSCSEG00000018766) rasgrf2b (ENSCSEG00000018739) ENSCSEG00000018730 otpb (ENSCSEG00000018724) scamp1 (ENSCSEG00000018720) lhfpl2b (ENSCSEG00000018714) ENSCSEG00000018700 mrps36 (ENSCSEG00000018682) pdxp (ENSCSEG00000018679) ENSCSEG00000018671 spef2 (ENSCSEG00000018648) lifra (ENSCSEG00000018636) ENSCSEG00000018625 cdo1 (ENSCSEG00000018610) ENSCSEG00000018596 ##22 COMMD10 (ENSCSEG00000018586) sema6a (ENSCSEG00000018522) ENSCSEG00000018507 ENSCSEG00000018503 DMXL1 (ENSCSEG00000018469) hsd17b4 (ENSCSEG00000018428) prr16 (ENSCSEG00000018421) ENSCSEG00000018414 atxn2 (ENSCSEG00000018366) mapkapk5 (ENSCSEG00000018343) ostf1 (ENSCSEG00000018324) nmrk1 (ENSCSEG00000018105) ENSCSEG00000018068 RNF122 (ENSCSEG00000018058) ENSCSEG00000018018 Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Anabantaria ANCESTRAL SPECIES 4 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Anabantoidei ANCESTRAL SPECIES 4 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Climbing perch MODERN SPECIES 22 msh3 (ENSATEG00000019638) rasgrf2b (ENSATEG00000019495) CKMT2 (ENSATEG00000019453) ENSATEG00000019446 ENSATEG00000019435 otpb (ENSATEG00000019427) ENSATEG00000019393 ENSATEG00000019377 ENSATEG00000019354 ENSATEG00000019347 ENSATEG00000019341 ENSATEG00000019290 ENSATEG00000019255 ENSATEG00000019228 ENSATEG00000019206 ENSATEG00000019189 ##22 COMMD10 (ENSATEG00000019168) ENSATEG00000019102 DMXL1 (ENSATEG00000018864) ENSATEG00000018733 ENSATEG00000018697 ENSATEG00000028142 ENSATEG00000018587 ENSATEG00000018537 ENSATEG00000018523 ENSATEG00000018484 ENSATEG00000018477 RNF122 (ENSATEG00000027974) ENSATEG00000018370 ENSATEG00000018341 ENSATEG00000018314 Carangaria ANCESTRAL SPECIES 9 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Pleuronectoidei ANCESTRAL SPECIES 8 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a.f ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Turbot MODERN SPECIES 21 rasgrf2b (ENSSMAG00000005481) CKMT2 (ENSSMAG00000005443) ENSSMAG00000031758 ENSSMAG00000026806 otpb (ENSSMAG00000005414) ENSSMAG00000005357 ENSSMAG00000005329 ENSSMAG00000005258 ENSSMAG00000005249 ENSSMAG00000025714 ENSSMAG00000005225 ENSSMAG00000005190 ENSSMAG00000005143 ENSSMAG00000005084 ENSSMAG00000005068 ENSSMAG00000005025 ##22 COMMD10 (ENSSMAG00000005004) ENSSMAG00000004891 DMXL1 (ENSSMAG00000004792) ENSSMAG00000004707 ENSSMAG00000004694 ENSSMAG00000004683 ENSSMAG00000004674 ENSSMAG00000004627 ENSSMAG00000004594 ENSSMAG00000004584 ENSSMAG00000003845 ENSSMAG00000003749 ENSSMAG00000024703 ENSSMAG00000003684 ENSSMAG00000003652 Carangaria_A ANCESTRAL SPECIES 6 ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00940000181535 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00970000193421.C.a.ic.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d Seriola ANCESTRAL SPECIES 40 ENSGT00550000074856.c.b ENSGT00950000183166.a.b ENSGT00940000158930 ENSGT00950000182937.A.b ENSGT00950000182869.e.b.g.a ENSGT00940000153866.B ENSGT00940000156918 ENSGT00390000001618 ENSGT00390000000378.d.b ENSGT00390000003682.h ENSGT01030000234626.D ENSGT00390000010239 ENSGT00390000002511 ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a.jc ##22 ENSGT00940000156044 ENSGT00940000154702.b ENSGT00940000178067.a ENSGT00940000178067.b ENSGT00940000155640.a ENSGT00940000164450.a ENSGT00390000017970.f.a Greater amberjack MODERN SPECIES 175 ENSSDUG00000022925 PLAT (ENSSDUG00000022935) ikbkb (ENSSDUG00000022942) vdac3 (ENSSDUG00000022952) enkd1 (ENSSDUG00000022958) polb (ENSSDUG00000022962) rpl6 (ENSSDUG00000022976) ENSSDUG00000022980 dynll1 (ENSSDUG00000022983) acaa2 (ENSSDUG00000022985) mrpl40 (ENSSDUG00000022994) si:ch211-51h9.6 (ENSSDUG00000022999) ENSSDUG00000023001 ENSSDUG00000023006 cdo1 (ENSSDUG00000023015) AP3S1 (ENSSDUG00000023019) ##22 aacs (ENSSDUG00000023028) ENSSDUG00000023050 ENSSDUG00000023059 ENSSDUG00000023060 ENSSDUG00000023064 jak2b (ENSSDUG00000023068) zgc:114041 (ENSSDUG00000023083) ENSSDUG00000023088 Yellowtail amberjack MODERN SPECIES 3029 ENSSLDG00000009218 PLAT (ENSSLDG00000009240) ikbkb (ENSSLDG00000009307) vdac3 (ENSSLDG00000009373) enkd1 (ENSSLDG00000009419) polb (ENSSLDG00000009488) ENSSLDG00000009544 dynll1 (ENSSLDG00000009562) rpl6 (ENSSLDG00000009577) ENSSLDG00000009589 acaa2 (ENSSLDG00000009631) mrpl40 (ENSSLDG00000009671) si:ch211-51h9.6 (ENSSLDG00000009683) ENSSLDG00000009708 cdo1 (ENSSLDG00000009729) AP3S1 (ENSSLDG00000009752) ##22 aacs (ENSSLDG00000009794) ENSSLDG00000009888 ENSSLDG00000009917 ENSSLDG00000009933 jak2b (ENSSLDG00000009968) zgc:114041 (ENSSLDG00000010046) ENSSLDG00000010083 Ovalentaria ANCESTRAL SPECIES 4 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Aplocheiloidei ANCESTRAL SPECIES 21 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Mangrove rivulus MODERN SPECIES 21 msh3 (ENSKMAG00000002204) rasgrf2b (ENSKMAG00000002012) ckmt2a (ENSKMAG00000001939) ENSKMAG00000001924 otpb (ENSKMAG00000001897) scamp1 (ENSKMAG00000001843) ENSKMAG00000001828 ENSKMAG00000001742 mrps36 (ENSKMAG00000001690) pdxp (ENSKMAG00000001683) ENSKMAG00000001637 ENSKMAG00000001568 lifra (ENSKMAG00000001550) ENSKMAG00000001540 cdo1 (ENSKMAG00000001522) AP3S1 (ENSKMAG00000001484) ##22 ENSKMAG00000001471 COMMD10 (ENSKMAG00000001440) sema6a (ENSKMAG00000001369) DMXL1 (ENSKMAG00000001136) hsd17b4 (ENSKMAG00000001050) prr16 (ENSKMAG00000001042) ENSKMAG00000001024 ENSKMAG00000001016 atxn2 (ENSKMAG00000000980) mapkapk5 (ENSKMAG00000000893) ostf1 (ENSKMAG00000000818) nmrk1 (ENSKMAG00000000813) ENSKMAG00000000798 RNF122 (ENSKMAG00000000771) CSGALNACT1 (ENSKMAG00000000757) Turquoise killifish MODERN SPECIES 1627 ENSNFUG00015014407 ENSNFUG00015014390 msh3 (ENSNFUG00015013228) ENSNFUG00015013185 ckmt2a (ENSNFUG00015013170) ENSNFUG00015013160 otpb (ENSNFUG00015013153) Nfu_g_1_009407 (ENSNFUG00015013128) ENSNFUG00015013122 ENSNFUG00015012931 MRPS36 (ENSNFUG00015012923) PDXP (ENSNFUG00015012917) LIFRA (ENSNFUG00015012860) ENSNFUG00015012851 CDO1 (ENSNFUG00015012843) AP3S1 (ENSNFUG00015012824) ##22 COMMD10 (ENSNFUG00015012814) sema6a (ENSNFUG00015012748) DMXL1 (ENSNFUG00015012627) hsd17b4 (ENSNFUG00015012592) PRR16 (ENSNFUG00015012584) ENSNFUG00015012581 SH2B3 (ENSNFUG00015012577) ATXN2 (ENSNFUG00015011645) OSTF1 (ENSNFUG00015011566) MAPKAPK5 (ENSNFUG00015011487) nmrk1 (ENSNFUG00015011467) CABZ01074899.1 (ENSNFUG00015011394) RNF122 (ENSNFUG00015011373) CSGALNACT1 (ENSNFUG00015011365) PPAP2A (ENSNFUG00015011355) Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a NAME_4 ANCESTRAL SPECIES 24 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Mummichog MODERN SPECIES 2272 ENSFHEG00000021566 msh3 (ENSFHEG00000021546) rasgrf2b (ENSFHEG00000021480) ckmt2a (ENSFHEG00000021390) ENSFHEG00000021363 otpb (ENSFHEG00000021353) ENSFHEG00000021333 ENSFHEG00000021313 ENSFHEG00000021297 mrps36 (ENSFHEG00000021291) pdxp (ENSFHEG00000021262) spef2 (ENSFHEG00000021227) ENSFHEG00000000869 ENSFHEG00000020410 cdo1 (ENSFHEG00000000590) AP3S1 (ENSFHEG00000020380) ##22 COMMD10 (ENSFHEG00000020362) sema6a (ENSFHEG00000020352) sema6a (ENSFHEG00000020341) DMXL1 (ENSFHEG00000020309) hsd17b4 (ENSFHEG00000020106) prr16 (ENSFHEG00000019618) ENSFHEG00000019603 ENSFHEG00000019586 atxn2 (ENSFHEG00000019561) ENSFHEG00000019541 ENSFHEG00000019503 ostf1 (ENSFHEG00000019489) nmrk1 (ENSFHEG00000019450) ENSFHEG00000019442 ENSFHEG00000019429 Sheepshead minnow MODERN SPECIES 259 AP3S1 (ENSCVAG00000019428) ##22 COMMD10 (ENSCVAG00000019476) sema6a (ENSCVAG00000019528) DMXL1 (ENSCVAG00000019889) hsd17b4 (ENSCVAG00000019919) prr16 (ENSCVAG00000019923) ENSCVAG00000019936 ENSCVAG00000019950 atxn2 (ENSCVAG00000020160) mapkapk5 (ENSCVAG00000020257) ostf1 (ENSCVAG00000020273) nmrk1 (ENSCVAG00000020287) ENSCVAG00000020298 RNF122 (ENSCVAG00000020315) CSGALNACT1 (ENSCVAG00000020324) ENSCVAG00000020335 Poeciliinae ANCESTRAL SPECIES 5 ENSGT00550000074949.k ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565.h ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT01050000244968.c.d ENSGT00940000159152.d ENSGT00490000043388.a ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000154089.b ENSGT00940000156812 ENSGT00940000156730.a Poecilia ANCESTRAL SPECIES 3 ENSGT00550000074949.k ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565.h ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT01050000244968.c.d ENSGT00940000159152.d ENSGT00490000043388.a ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000154089.b ENSGT00940000156812 ENSGT00940000156730.a NAME_6 ANCESTRAL SPECIES 82 ENSGT00550000074949.k ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565.h ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT01050000244968.c.d ENSGT00940000159152.d ENSGT00490000043388.a ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000154089.b ENSGT00940000156812 ENSGT00940000156730.a Sailfin molly MODERN SPECIES 1103 MAN1A1 (ENSPLAG00000008968) cdo1 (ENSPLAG00000008909) AP3S1 (ENSPLAG00000008885) ##22 COMMD10 (ENSPLAG00000008863) sema6a (ENSPLAG00000008853) Amazon molly MODERN SPECIES 340 msh3 (ENSPFOG00000000563) rasgrf2b (ENSPFOG00000000906) ckmt2a (ENSPFOG00000001185) ENSPFOG00000001274 otpb (ENSPFOG00000001352) scamp1 (ENSPFOG00000001460) ENSPFOG00000001608 ENSPFOG00000001689 mrps36 (ENSPFOG00000001860) pdxp (ENSPFOG00000001900) ENSPFOG00000001952 ENSPFOG00000002120 ENSPFOG00000002245 cdo1 (ENSPFOG00000002497) AP3S1 (ENSPFOG00000002499) ##22 COMMD10 (ENSPFOG00000002561) sema6a (ENSPFOG00000002593) SEMA6A (ENSPFOG00000002874) DMXL1 (ENSPFOG00000003104) hsd17b4 (ENSPFOG00000004195) prr16 (ENSPFOG00000005157) ENSPFOG00000005168 ENSPFOG00000005191 ENSPFOG00000005329 RNF122 (ENSPFOG00000005346) ENSPFOG00000005364 nmrk1 (ENSPFOG00000005473) ostf1 (ENSPFOG00000005610) mapkapk5 (ENSPFOG00000005699) atxn2 (ENSPFOG00000005857) Guppy MODERN SPECIES 461 ENSPREG00000012458 msh3 (ENSPREG00000012499) rasgrf2b (ENSPREG00000012616) ckmt2a (ENSPREG00000012749) ENSPREG00000012790 scamp1 (ENSPREG00000012821) ENSPREG00000012842 ENSPREG00000012851 ENSPREG00000012871 mrps36 (ENSPREG00000012889) pdxp (ENSPREG00000012937) ENSPREG00000012976 ENSPREG00000013094 ENSPREG00000013125 cdo1 (ENSPREG00000013161) AP3S1 (ENSPREG00000013270) ##22 COMMD10 (ENSPREG00000013739) sema6a (ENSPREG00000013871) DMXL1 (ENSPREG00000014068) hsd17b4 (ENSPREG00000014297) prr16 (ENSPREG00000014370) ENSPREG00000014376 ENSPREG00000014387 CSGALNACT1 (ENSPREG00000014398) ENSPREG00000014412 ENSPREG00000014422 RNF122 (ENSPREG00000014439) ENSPREG00000014460 nmrk1 (ENSPREG00000014500) ostf1 (ENSPREG00000014724) mapkapk5 (ENSPREG00000014764) Platyfish MODERN SPECIES 3 ENSXMAG00000022534 rasgrf2b (ENSXMAG00000016680) ckmt2a (ENSXMAG00000016636) ENSXMAG00000016619 otpb (ENSXMAG00000016614) scamp1 (ENSXMAG00000024922) ENSXMAG00000016575 ENSXMAG00000016568 ENSXMAG00000022438 mrps36 (ENSXMAG00000016548) pdxp (ENSXMAG00000016546) ENSXMAG00000016495 ENSXMAG00000016494 ENSXMAG00000016486 cdo1 (ENSXMAG00000029910) AP3S1 (ENSXMAG00000016466) ##22 COMMD10 (ENSXMAG00000016453) sema6a (ENSXMAG00000021461) DMXL1 (ENSXMAG00000016332) hsd17b4 (ENSXMAG00000016234) prr16 (ENSXMAG00000022156) ENSXMAG00000016227 ENSXMAG00000020971 CSGALNACT1 (ENSXMAG00000016212) RNF122 (ENSXMAG00000016203) ENSXMAG00000016201 ostf1 (ENSXMAG00000016170) mapkapk5 (ENSXMAG00000016155) atxn2 (ENSXMAG00000003481) ENSXMAG00000003470 atp5fa1 (ENSXMAG00000003443) Oryzias ANCESTRAL SPECIES 7 ENSGT01070000253853 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Oryzias_b ANCESTRAL SPECIES 6 ENSGT01070000253853 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Indian medaka MODERN SPECIES 11 ENSOMEG00000018681 msh3 (ENSOMEG00000018740) rasgrf2b (ENSOMEG00000000805) ckmt2a (ENSOMEG00000018857) ENSOMEG00000018866 otpb (ENSOMEG00000000708) scamp1 (ENSOMEG00000018965) ENSOMEG00000018996 ENSOMEG00000019041 mrps36 (ENSOMEG00000019062) pdxp (ENSOMEG00000019075) spef2 (ENSOMEG00000019266) lifra (ENSOMEG00000019414) ENSOMEG00000019434 cdo1 (ENSOMEG00000019463) AP3S1 (ENSOMEG00000019507) ##22 COMMD10 (ENSOMEG00000019553) sema6a (ENSOMEG00000019695) DMXL1 (ENSOMEG00000019793) hsd17b4 (ENSOMEG00000019866) prr16 (ENSOMEG00000019888) ENSOMEG00000019930 atxn2 (ENSOMEG00000020080) mapkapk5 (ENSOMEG00000020161) ostf1 (ENSOMEG00000020202) nmrk1 (ENSOMEG00000020242) ENSOMEG00000020270 RNF122 (ENSOMEG00000020291) CSGALNACT1 (ENSOMEG00000020318) ENSOMEG00000020349 atp5fa1 (ENSOMEG00000020428) Javanese ricefish MODERN SPECIES 23 MYORG (ENSOJAG00000008347) ENSOJAG00000008360 msh3 (ENSOJAG00000008533) rasgrf2b (ENSOJAG00000010445) ENSOJAG00000010872 otpb (ENSOJAG00000010884) scamp1 (ENSOJAG00000010921) ENSOJAG00000010987 ENSOJAG00000011001 mrps36 (ENSOJAG00000011085) pdxp (ENSOJAG00000011099) spef2 (ENSOJAG00000011132) lifra (ENSOJAG00000011198) ENSOJAG00000011230 cdo1 (ENSOJAG00000011296) AP3S1 (ENSOJAG00000011328) ##22 COMMD10 (ENSOJAG00000011442) sema6a (ENSOJAG00000011490) DMXL1 (ENSOJAG00000006307) hsd17b4 (ENSOJAG00000012252) prr16 (ENSOJAG00000015872) ENSOJAG00000015878 ENSOJAG00000015898 ENSOJAG00000015920 atxn2 (ENSOJAG00000015930) ENSOJAG00000015936 mapkapk5 (ENSOJAG00000015957) ostf1 (ENSOJAG00000016291) nmrk1 (ENSOJAG00000016344) ENSOJAG00000016382 RNF122 (ENSOJAG00000016487) Oryzias_a ANCESTRAL SPECIES 3 ENSGT01070000253853 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287.c ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Japanese Medaka HdrR MODERN SPECIES 23 ENSORLG00000027894 msh3 (ENSORLG00000003076) rasgrf2b (ENSORLG00000003190) CKMT2 (ENSORLG00000003211) ENSORLG00000003230 otpb (ENSORLG00000025542) SCAMP1 (ENSORLG00000003266) ENSORLG00000003278 ENSORLG00000003310 pdxp (ENSORLG00000024748) mrps36 (ENSORLG00000028218) spef2 (ENSORLG00000003349) lifra (ENSORLG00000003358) ENSORLG00000003378 cdo1 (ENSORLG00000003390) AP3S1 (ENSORLG00000003409) ##22 COMMD10 (ENSORLG00000003421) ENSORLG00000027333 sema6a (ENSORLG00000003447) DMXL1 (ENSORLG00000003487) hsd17b4 (ENSORLG00000003551) prr16 (ENSORLG00000022815) ENSORLG00000003569 atxn2 (ENSORLG00000003606) mapkapk5 (ENSORLG00000003628) ostf1 (ENSORLG00000026860) nmrk1 (ENSORLG00000024964) ENSORLG00000003657 RNF122 (ENSORLG00000003666) ENSORLG00000003687 ENSORLG00000003714 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1064 dusp2 (ENSOSIG00000023264) MYORG (ENSOSIG00000023261) msh3 (ENSOSIG00000023233) RASGRF2 (ENSOSIG00000023203) otpb (ENSOSIG00000023187) scamp1 (ENSOSIG00000023152) ENSOSIG00000023133 ENSOSIG00000023128 mrps36 (ENSOSIG00000023119) pdxp (ENSOSIG00000023115) ENSOSIG00000023114 lifra (ENSOSIG00000023111) ENSOSIG00000023102 ENSOSIG00000023099 cdo1 (ENSOSIG00000023095) AP3S1 (ENSOSIG00000023091) ##22 ENSOSIG00000023088 COMMD10 (ENSOSIG00000023086) sema6a (ENSOSIG00000022449) DMXL1 (ENSOSIG00000022351) hsd17b4 (ENSOSIG00000022251) prr16 (ENSOSIG00000022159) ENSOSIG00000022156 SH2B3 (ENSOSIG00000022154) atxn2 (ENSOSIG00000022136) ENSOSIG00000022114 mapkapk5 (ENSOSIG00000022093) ostf1 (ENSOSIG00000022010) nmrk1 (ENSOSIG00000021990) ENSOSIG00000021989 RNF122 (ENSOSIG00000021987) Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1671 ENSOSIG00000012087 ##22 Chinese medaka MODERN SPECIES 1688 ENSOSIG00000012470 ##22 Chinese medaka MODERN SPECIES 3731 AP3S1 (ENSOSIG00000002542) ##22 Ovalentaria_B ANCESTRAL SPECIES 9 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Pomacentridae ANCESTRAL SPECIES ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b.j ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Pomacentridae_A ANCESTRAL SPECIES 1 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b.j ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Amphiprion ANCESTRAL SPECIES 20 ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00940000161263 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b.j ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d Clown anemonefish MODERN SPECIES 3622 rasgrf2b (ENSAOCG00000001212) ckmt2a (ENSAOCG00000017273) ENSAOCG00000017236 ENSAOCG00000017223 otpb (ENSAOCG00000017211) scamp1 (ENSAOCG00000017187) ENSAOCG00000017155 ENSAOCG00000017128 mrps36 (ENSAOCG00000017088) pdxp (ENSAOCG00000001175) ENSAOCG00000001172 spef2 (ENSAOCG00000017034) lifra (ENSAOCG00000001168) ENSAOCG00000016895 cdo1 (ENSAOCG00000016872) AP3S1 (ENSAOCG00000016832) ##22 COMMD10 (ENSAOCG00000016777) sema6a (ENSAOCG00000016717) ENSAOCG00000016621 DMXL1 (ENSAOCG00000016550) hsd17b4 (ENSAOCG00000016306) prr16 (ENSAOCG00000016193) ENSAOCG00000016154 ENSAOCG00000016137 atxn2 (ENSAOCG00000001107) mapkapk5 (ENSAOCG00000016043) ostf1 (ENSAOCG00000015985) nmrk1 (ENSAOCG00000015932) ENSAOCG00000015918 RNF122 (ENSAOCG00000015901) ENSAOCG00000015880 Orange clownfish MODERN SPECIES 19 ENSAPEG00000018513 otpb (ENSAPEG00000018531) ENSAPEG00000018539 scamp1 (ENSAPEG00000018554) ENSAPEG00000018591 ENSAPEG00000018648 ENSAPEG00000019219 ENSAPEG00000019395 mrps36 (ENSAPEG00000019416) pdxp (ENSAPEG00000019422) ENSAPEG00000019432 spef2 (ENSAPEG00000019443) lifra (ENSAPEG00000019494) ENSAPEG00000019512 cdo1 (ENSAPEG00000019532) AP3S1 (ENSAPEG00000019564) ##22 COMMD10 (ENSAPEG00000019601) sema6a (ENSAPEG00000019633) DMXL1 (ENSAPEG00000019741) hsd17b4 (ENSAPEG00000020065) prr16 (ENSAPEG00000020172) ENSAPEG00000020203 ENSAPEG00000020219 atxn2 (ENSAPEG00000020250) mapkapk5 (ENSAPEG00000020350) ostf1 (ENSAPEG00000020405) nmrk1 (ENSAPEG00000020451) ENSAPEG00000020457 RNF122 (ENSAPEG00000020484) CSGALNACT1 (ENSAPEG00000020504) Spiny chromis MODERN SPECIES 129 ckmt2a (ENSAPOG00000003007) ENSAPOG00000003022 ENSAPOG00000003053 otpb (ENSAPOG00000003078) scamp1 (ENSAPOG00000003118) ENSAPOG00000003137 ENSAPOG00000003169 ENSAPOG00000003203 mrps36 (ENSAPOG00000003231) pdxp (ENSAPOG00000003239) ENSAPOG00000003256 spef2 (ENSAPOG00000003339) lifra (ENSAPOG00000003373) ENSAPOG00000003383 cdo1 (ENSAPOG00000003408) AP3S1 (ENSAPOG00000003452) ##22 COMMD10 (ENSAPOG00000003465) ENSAPOG00000003473 sema6a (ENSAPOG00000003572) DMXL1 (ENSAPOG00000003808) hsd17b4 (ENSAPOG00000000085) prr16 (ENSAPOG00000003943) ENSAPOG00000003976 Bicolor damselfish MODERN SPECIES 1167 scamp1 (ENSSPAG00000011649) ENSSPAG00000011629 ENSSPAG00000011609 ENSSPAG00000011578 mrps36 (ENSSPAG00000011568) pdxp (ENSSPAG00000011561) UGT3A2 (ENSSPAG00000011547) spef2 (ENSSPAG00000011491) lifra (ENSSPAG00000011462) CEP78 (ENSSPAG00000011432) cdo1 (ENSSPAG00000011415) AP3S1 (ENSSPAG00000011392) ##22 COMMD10 (ENSSPAG00000011369) Cichlidae ANCESTRAL SPECIES 6 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443 ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Midas cichlid MODERN SPECIES 299 ENSACIG00000005775 msh3 (ENSACIG00000005690) rasgrf2b (ENSACIG00000005616) ckmt2a (ENSACIG00000005586) ENSACIG00000005572 otpb (ENSACIG00000005567) scamp1 (ENSACIG00000005504) ENSACIG00000005496 ENSACIG00000005471 mrps36 (ENSACIG00000005431) pdxp (ENSACIG00000005411) ENSACIG00000005389 ENSACIG00000005355 CEP78 (ENSACIG00000005332) cdo1 (ENSACIG00000005324) AP3S1 (ENSACIG00000005300) ##22 COMMD10 (ENSACIG00000005259) sema6a (ENSACIG00000005224) DMXL1 (ENSACIG00000005116) ENSACIG00000005062 prr16 (ENSACIG00000005043) ENSACIG00000005029 ENSACIG00000005011 atxn2 (ENSACIG00000004928) mapkapk5 (ENSACIG00000004891) ostf1 (ENSACIG00000004860) nmrk1 (ENSACIG00000004842) ENSACIG00000004818 RNF122 (ENSACIG00000004796) ENSACIG00000004772 ENSACIG00000004759 Pseudocrenilabrinae ANCESTRAL SPECIES 11 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443.lb ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Nile tilapia MODERN SPECIES 3 ENSONIG00000034144 ENSONIG00000031633 msh3 (ENSONIG00000014449) rasgrf2b (ENSONIG00000014451) ckmt2a (ENSONIG00000014455) ENSONIG00000014458 scamp1 (ENSONIG00000014460) LHFPL2 (ENSONIG00000031614) ENSONIG00000014465 mrps36 (ENSONIG00000014470) pdxp (ENSONIG00000037485) spef2 (ENSONIG00000014471) lifra (ENSONIG00000014473) CEP78 (ENSONIG00000014475) cdo1 (ENSONIG00000014479) AP3S1 (ENSONIG00000014481) ##22 COMMD10 (ENSONIG00000014485) sema6a (ENSONIG00000014486) DMXL1 (ENSONIG00000014493) hsd17b4 (ENSONIG00000014505) prr16 (ENSONIG00000014516) ENSONIG00000014517 ENSONIG00000014518 atxn2 (ENSONIG00000014521) mapkapk5 (ENSONIG00000014527) ostf1 (ENSONIG00000014534) nmrk1 (ENSONIG00000015273) ENSONIG00000015265 RNF122 (ENSONIG00000039819) CSGALNACT1 (ENSONIG00000015262) PLPP1 (ENSONIG00000030234) Pseudocrenilabrinae_A ANCESTRAL SPECIES 8 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443.lb ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Lyretail cichlid MODERN SPECIES 306 msh3 (ENSNBRG00000017564) rasgrf2b (ENSNBRG00000017537) ckmt2a (ENSNBRG00000017503) ENSNBRG00000017483 ENSNBRG00000017423 otpb (ENSNBRG00000017402) scamp1 (ENSNBRG00000017376) ENSNBRG00000017355 ENSNBRG00000017332 mrps36 (ENSNBRG00000017305) pdxp (ENSNBRG00000017292) spef2 (ENSNBRG00000017118) lifra (ENSNBRG00000017052) ENSNBRG00000017022 cdo1 (ENSNBRG00000017002) AP3S1 (ENSNBRG00000016685) ##22 COMMD10 (ENSNBRG00000016535) sema6a (ENSNBRG00000016507) SEMA6A (ENSNBRG00000016462) DMXL1 (ENSNBRG00000016357) hsd17b4 (ENSNBRG00000016012) prr16 (ENSNBRG00000015943) ENSNBRG00000015931 ENSNBRG00000015894 atxn2 (ENSNBRG00000015794) mapkapk5 (ENSNBRG00000015746) ostf1 (ENSNBRG00000015734) nmrk1 (ENSNBRG00000015705) ENSNBRG00000015698 RNF122 (ENSNBRG00000015683) CSGALNACT1 (ENSNBRG00000015610) Haplochromini ANCESTRAL SPECIES 4 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443.lb ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Burton s mouthbrooder MODERN SPECIES 296 msh3 (ENSHBUG00000001900) rasgrf2b (ENSHBUG00000001955) ckmt2a (ENSHBUG00000001998) ENSHBUG00000002007 ENSHBUG00000002020 otpb (ENSHBUG00000002023) scamp1 (ENSHBUG00000002039) ENSHBUG00000002051 ENSHBUG00000002068 mrps36 (ENSHBUG00000002117) pdxp (ENSHBUG00000002129) spef2 (ENSHBUG00000002462) lifra (ENSHBUG00000002560) ENSHBUG00000002574 cdo1 (ENSHBUG00000002592) AP3S1 (ENSHBUG00000002605) ##22 COMMD10 (ENSHBUG00000002629) sema6a (ENSHBUG00000002682) DMXL1 (ENSHBUG00000002746) hsd17b4 (ENSHBUG00000002823) prr16 (ENSHBUG00000002839) ENSHBUG00000002848 ENSHBUG00000002855 atxn2 (ENSHBUG00000002921) mapkapk5 (ENSHBUG00000002975) ostf1 (ENSHBUG00000002985) nmrk1 (ENSHBUG00000002992) ENSHBUG00000003022 RNF122 (ENSHBUG00000003054) CSGALNACT1 (ENSHBUG00000003076) ENSHBUG00000003102 Haplochromini_A ANCESTRAL SPECIES 4 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.b ENSGT00390000003122.a.a.b.a ENSGT00390000017443.lb ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a P. nyererei MODERN SPECIES 408 rasgrf2b (ENSPNYG00000018007) ckmt2a (ENSPNYG00000017975) ENSPNYG00000017962 ENSPNYG00000017906 otpb (ENSPNYG00000017891) scamp1 (ENSPNYG00000017880) ENSPNYG00000017864 ENSPNYG00000017850 ENSPNYG00000017818 mrps36 (ENSPNYG00000017803) pdxp (ENSPNYG00000017790) spef2 (ENSPNYG00000017718) lifra (ENSPNYG00000017699) ENSPNYG00000017685 cdo1 (ENSPNYG00000017670) AP3S1 (ENSPNYG00000017651) ##22 COMMD10 (ENSPNYG00000017618) ENSPNYG00000017592 sema6a (ENSPNYG00000017551) DMXL1 (ENSPNYG00000017313) hsd17b4 (ENSPNYG00000017127) prr16 (ENSPNYG00000017068) ENSPNYG00000017050 ENSPNYG00000017022 atxn2 (ENSPNYG00000016981) atxn2 (ENSPNYG00000016952) mapkapk5 (ENSPNYG00000016900) ostf1 (ENSPNYG00000016858) nmrk1 (ENSPNYG00000016841) ENSPNYG00000016822 RNF122 (ENSPNYG00000016793) Haplochromini_B ANCESTRAL SPECIES 2 ENSGT00550000074949 ENSGT00940000155679.c ENSGT00950000182772.B.a.a.h ENSGT00940000177396 ENSGT00390000001362.a ENSGT00940000159952.a.a ENSGT00940000157310.h ENSGT00990000203589.b.a ENSGT00390000003122.a.a.b.a ENSGT00390000017443.lb ENSGT00940000162045 ENSGT00390000008160 ENSGT00940000165259.b ENSGT00390000013287 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT00920000149159 ENSGT00940000159384 ENSGT00490000043388.a ENSGT00940000159152.d ENSGT01050000244968.c.d ENSGT00940000156730.a Zebra mbuna MODERN SPECIES 1094 rasgrf2b (ENSMZEG00005009197) ckmt2a (ENSMZEG00005009166) ENSMZEG00005009151 ENSMZEG00005009140 ENSMZEG00005009127 otpb (ENSMZEG00005009113) scamp1 (ENSMZEG00005009067) ENSMZEG00005009044 ENSMZEG00005009004 mrps36 (ENSMZEG00005008995) pdxp (ENSMZEG00005008982) ENSMZEG00005008970 lifra (ENSMZEG00005008952) ENSMZEG00005008936 cdo1 (ENSMZEG00005008922) AP3S1 (ENSMZEG00005008898) ##22 COMMD10 (ENSMZEG00005008881) sema6a (ENSMZEG00005008800) DMXL1 (ENSMZEG00005008659) hsd17b4 (ENSMZEG00005008558) prr16 (ENSMZEG00005008534) ENSMZEG00005008527 ENSMZEG00005008518 atxn2 (ENSMZEG00005008476) mapkapk5 (ENSMZEG00005008431) ostf1 (ENSMZEG00005008414) nmrk1 (ENSMZEG00005008398) ENSMZEG00005008386 RNF122 (ENSMZEG00005008369) CSGALNACT1 (ENSMZEG00005008343) ENSMZEG00005008317 Eastern happy MODERN SPECIES 3 msh3 (ENSACLG00000012067) rasgrf2b (ENSACLG00000012112) ckmt2a (ENSACLG00000012315) ENSACLG00000012399 ENSACLG00000012415 otpb (ENSACLG00000012425) scamp1 (ENSACLG00000012450) ENSACLG00000012506 ENSACLG00000012537 mrps36 (ENSACLG00000012574) pdxp (ENSACLG00000012686) ENSACLG00000012693 lifra (ENSACLG00000012702) ENSACLG00000013069 cdo1 (ENSACLG00000013072) AP3S1 (ENSACLG00000013077) ##22 COMMD10 (ENSACLG00000013081) sema6a (ENSACLG00000013097) DMXL1 (ENSACLG00000013246) hsd17b4 (ENSACLG00000013301) prr16 (ENSACLG00000013331) ENSACLG00000013336 ENSACLG00000013342 atxn2 (ENSACLG00000013359) mapkapk5 (ENSACLG00000013404) ostf1 (ENSACLG00000013425) nmrk1 (ENSACLG00000013441) ENSACLG00000013451 RNF122 (ENSACLG00000013459) CSGALNACT1 (ENSACLG00000013468) ENSACLG00000013479 Protacanthopterygii ANCESTRAL SPECIES 74 ENSGT00940000159850 ENSGT00940000164634 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a ENSGT00940000160064.b ENSGT00940000155192 ENSGT00530000064550.A ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000167760 ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000166026 ENSGT00950000183191.b ENSGT00940000156812 ENSGT00940000154089.b ENSGT01030000234519.e.a.a.a.b.e ENSGT00940000159488 ENSGT00940000173441 ENSGT00940000172876 ENSGT00940000158577 ENSGT00390000003364 Northern pike MODERN SPECIES 12 si:ch211-103n10.5 (ENSELUG00000018428) tspan36 (ENSELUG00000018449) mapk4 (ENSELUG00000018475) ENSELUG00000018488 HPGDS (ENSELUG00000018513) smarcad1a (ENSELUG00000018535) atoh1a (ENSELUG00000018552) grid2 (ENSELUG00000018608) CCSER1 (ENSELUG00000018670) trim36 (ENSELUG00000018691) pggt1b (ENSELUG00000018712) ENSELUG00000018734 fem1c (ENSELUG00000018750) tmed7 (ENSELUG00000018781) cdo1 (ENSELUG00000018836) ap3s1 (ENSELUG00000018910) ##22 commd10 (ENSELUG00000018992) sema6a (ENSELUG00000019137) DMXL1 (ENSELUG00000019280) hsd17b4 (ENSELUG00000019400) prr16 (ENSELUG00000000832) ENSELUG00000019436 SH2B3 (ENSELUG00000026805) atxn2 (ENSELUG00000019632) ENSELUG00000019708 ENSELUG00000000871 RASEF (ENSELUG00000019855) FRMD3 (ENSELUG00000000878) idnk (ENSELUG00000020041) me2 (ENSELUG00000020081) aptx (ENSELUG00000028256) Salmoninae ANCESTRAL SPECIES 292 ENSGT00940000155411.c.`b.b ENSGT00390000008742.l ENSGT00940000159850.d ENSGT00940000164634.l ENSGT00910000144252.d.a.c ENSGT00940000160064.b.b ENSGT00940000155192.v ENSGT00530000064550.A ENSGT00940000153912.B.j ENSGT00940000158373.n ENSGT00950000183128.A.b ENSGT00940000158626.l ENSGT00940000158463.d ENSGT00390000018226.i ENSGT00970000193421.C.a ##22 ENSGT00390000001500.g ENSGT00940000156565.s.a ENSGT00390000001500.h ENSGT00940000156565.s.b ENSGT00390000000096.a ENSGT00940000158343.d.a ENSGT00910000144204.a.a ENSGT00940000166026.a ENSGT00950000183191.b.d ENSGT00940000156812.f ENSGT00940000154089.b.g ENSGT01030000234519.e.a.a.a.b.e.a ENSGT00940000159488.k.b ENSGT00940000158577.s.a.a ENSGT00940000159488.l Salmoninae_a DUPLICATION Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00970000193421.C.a.nc.a ##22 Salmo ANCESTRAL SPECIES ENSGT00970000193421.C.a.nc.a ##22 Atlantic salmon MODERN SPECIES 12 arrdc3a (ENSSSAG00000007639) ENSSSAG00000114198 ENSSSAG00000099675 ENSSSAG00000095640 ENSSSAG00000007453 smarcad1a (ENSSSAG00000007425) atoh1a (ENSSSAG00000007418) ENSSSAG00000007085 grid2 (ENSSSAG00000007119) CCSER1 (ENSSSAG00000007074) ENSSSAG00000006391 ENSSSAG00000006303 FEM1C (ENSSSAG00000006292) TMED7 (ENSSSAG00000006230) CDO1 (ENSSSAG00000006148) AP3S1 (ENSSSAG00000078268) ##22 COMMD10 (ENSSSAG00000078252) SEMA6A (ENSSSAG00000078215) ENSSSAG00000121027 ENSSSAG00000078154 ENSSSAG00000078141 ENSSSAG00000078135 ENSSSAG00000109292 ENSSSAG00000082482 ENSSSAG00000078056 ENSSSAG00000078042 ENSSSAG00000075144 ENSSSAG00000108971 ENSSSAG00000116675 ENSSSAG00000074833 ENSSSAG00000074815 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000164634.k ENSGT00950000183089.d.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a.d ENSGT00940000160064.b.a ENSGT00940000155192.u ENSGT00940000153912.B.i ENSGT00940000158373.m ENSGT00950000183128.A.a ENSGT00940000167760 ENSGT00940000158626.k ENSGT00940000158463.c ENSGT00390000018226.j ENSGT00970000193421.C.a.nc.b ##22 ENSGT00390000001500.g ENSGT00940000156565.s.a ENSGT00390000000096.a ENSGT00940000158343.d.a ENSGT00910000144204.a.a ENSGT00940000166026.a ENSGT00950000183191.b.d ENSGT00940000156812.f ENSGT00940000154089.b.g ENSGT01030000234519.e.a.a.a.b.e.a ENSGT00940000159488.k.b ENSGT00940000158577.s.a.a ENSGT00940000172876 ENSGT00940000158577.t ENSGT00390000003364 Salmo ANCESTRAL SPECIES ENSGT00940000164634.k ENSGT00950000183089.d.d ENSGT00390000008048.h ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a.d ENSGT00940000160064.b.a ENSGT00940000155192.u ENSGT00940000153912.B.i ENSGT00940000158373.m ENSGT00950000183128.A.a ENSGT00940000167760 ENSGT00940000158626.k ENSGT00940000158463.c ENSGT00390000018226.j ENSGT00970000193421.C.a.nc.b ##22 ENSGT00390000001500.g.c ENSGT00940000156565.s.a ENSGT00390000000096.a ENSGT00940000158343.d.a ENSGT00910000144204.a.a ENSGT00940000166026.a ENSGT00950000183191.b.d ENSGT00940000156812.f ENSGT00940000154089.b.g ENSGT01030000234519.e.a.a.a.b.e.a ENSGT00940000159488.k.b ENSGT00940000172876 ENSGT00940000158577.t ENSGT00390000003364 ENSGT00940000156437 River trout MODERN SPECIES 19 HPGDS (ENSSTUG00000031808) smarcad1a (ENSSTUG00000031068) ENSSTUG00000031052 ENSSTUG00000031048 atoh1a (ENSSTUG00000031039) grid2 (ENSSTUG00000030753) ENSSTUG00000030737 ENSSTUG00000030731 CCSER1 (ENSSTUG00000030712) trim36 (ENSSTUG00000030519) pggt1b (ENSSTUG00000030401) ENSSTUG00000030387 fem1c (ENSSTUG00000030381) tmed7 (ENSSTUG00000030340) cdo1 (ENSSTUG00000030331) AP3S1 (ENSSTUG00000030310) ##22 COMMD10 (ENSSTUG00000030272) ENSSTUG00000030261 sema6a (ENSSTUG00000029817) DMXL1 (ENSSTUG00000029778) hsd17b4 (ENSSTUG00000029331) prr16 (ENSSTUG00000029301) ENSSTUG00000029290 ENSSTUG00000029281 atxn2 (ENSSTUG00000029094) mapkapk5 (ENSSTUG00000028588) ENSSTUG00000027291 RASEF (ENSSTUG00000027179) ENSSTUG00000027167 FRMD3 (ENSSTUG00000026659) IDNK (ENSSTUG00000026610) Atlantic salmon MODERN SPECIES 16 mpeg1 (ENSSSAG00000076214) prf1.5 (ENSSSAG00000076217) hpgds (ENSSSAG00000076223) smarcad1a (ENSSSAG00000076233) atoh1a (ENSSSAG00000092250) ENSSSAG00000106044 ENSSSAG00000100858 grid2 (ENSSSAG00000076292) CCSER1 (ENSSSAG00000044369) trim36 (ENSSSAG00000044392) pggt1b (ENSSSAG00000045549) ENSSSAG00000045622 fem1c (ENSSSAG00000098301) TMED7 (ENSSSAG00000045648) cdo1 (ENSSSAG00000045718) ap3s1 (ENSSSAG00000045731) ##22 COMMD10 (ENSSSAG00000045760) SEMA6A (ENSSSAG00000045998) ENSSSAG00000096247 DMXL1 (ENSSSAG00000058011) ENSSSAG00000070946 ENSSSAG00000102082 ENSSSAG00000097642 ENSSSAG00000071130 ENSSSAG00000071146 ENSSSAG00000074897 ENSSSAG00000071386 ENSSSAG00000071380 FRMD3 (ENSSSAG00000071289) IDNK (ENSSSAG00000071271) UBQLN1 (ENSSSAG00000071249) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00950000183089.d.d ENSGT00970000196811.a.a ENSGT00390000008048 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a.d ENSGT00940000160064.b.a ENSGT00940000155192.u ENSGT00940000153912.B.i ENSGT00940000158373.m ENSGT00950000183128.A.a ENSGT00940000167760 ENSGT00940000158626.k ENSGT00940000158463.c ENSGT00390000018226.j ENSGT00970000193421.C.a.nc.b ##22 ENSGT00390000001500.g ENSGT00940000156565.s.a ENSGT00390000000096.a ENSGT00940000158343.d.a ENSGT00910000144204.a.a ENSGT00940000166026.a ENSGT00950000183191.b.d ENSGT00940000156812.f ENSGT00940000154089.b.g ENSGT01030000234519.e.a.a.a.b.e.a ENSGT00940000159488.k.b ENSGT00940000158577.s.a.a ENSGT00940000159488.l ENSGT00940000173441 ENSGT00940000172876 Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00970000196811.a.a ENSGT00390000008048 ENSGT00940000164067.C ENSGT00940000160278 ENSGT00910000144252.d.a.d ENSGT00940000160064.b.a ENSGT00940000155192.u ENSGT00530000064550.A ENSGT00940000153912.B.i ENSGT00940000158373.m ENSGT00950000183128.A.a ENSGT00940000167760 ENSGT00940000158626.k ENSGT00940000158463.c ENSGT00390000018226.j ENSGT00970000193421.C.a.nc.b ##22 ENSGT00390000001500.g ENSGT00940000156565.s.a ENSGT00390000000096.a ENSGT00940000158343.d.a ENSGT00910000144204.a.a ENSGT00940000166026.a ENSGT00950000183191.b.d ENSGT00940000156812.f ENSGT00940000154089.b.g ENSGT01030000234519.e.a.a.a.b.e.a ENSGT00940000159488.k.b ENSGT00940000158577.s.a.a ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742.k Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2952 ENSOTSG00005041437 CCSER1 (ENSOTSG00005041434) trim36 (ENSOTSG00005041374) pggt1b (ENSOTSG00005041280) ENSOTSG00005041265 fem1c (ENSOTSG00005041260) tmed7 (ENSOTSG00005041255) cdo1 (ENSOTSG00005041254) AP3S1 (ENSOTSG00005041245) ##22 COMMD10 (ENSOTSG00005041241) sema6a (ENSOTSG00005041238) ENSOTSG00005041237 sema6a (ENSOTSG00005040995) MASP1 (ENSOTSG00005040981) ENSOTSG00005040980 ENSOTSG00005040979 Chinook salmon MODERN SPECIES 28 lmbrd2a (ENSOTSG00005007936) spef2 (ENSOTSG00005008177) lifra (ENSOTSG00005009894) ENSOTSG00005009896 bri3bp (ENSOTSG00005009897) aacs (ENSOTSG00005009898) ENSOTSG00005009899 ENSOTSG00005009900 CCSER1 (ENSOTSG00005009902) trim36 (ENSOTSG00005009903) pggt1b (ENSOTSG00005009911) ENSOTSG00005009981 fem1c (ENSOTSG00005009995) tmed7 (ENSOTSG00005009996) cdo1 (ENSOTSG00005010001) AP3S1 (ENSOTSG00005010004) ##22 COMMD10 (ENSOTSG00005010009) sema6a (ENSOTSG00005010017) sema6a (ENSOTSG00005010119) ENSOTSG00005010120 lysmd3 (ENSOTSG00005010122) mblac2 (ENSOTSG00005010123) rtkna (ENSOTSG00005010124) ENSOTSG00005010125 smn1 (ENSOTSG00005010126) hspb11 (ENSOTSG00005010129) ENSOTSG00005010132 rhobtb4 (ENSOTSG00005010133) wdr54 (ENSOTSG00005010135) ENSOTSG00005010137 arsk (ENSOTSG00005010138) Rainbow trout MODERN SPECIES 27 ENSOMYG00000050711 mpeg1.3 (ENSOMYG00000014585) prf1.5 (ENSOMYG00000014593) HPGDS (ENSOMYG00000068733) smarcad1a (ENSOMYG00000014627) ENSOMYG00000077172 atoh1a (ENSOMYG00000014675) grid2 (ENSOMYG00000028019) CCSER1 (ENSOMYG00000028152) ENSOMYG00000028175 trim36 (ENSOMYG00000028553) ENSOMYG00000029444 ENSOMYG00000029482 fem1c (ENSOMYG00000029490) ENSOMYG00000029549 ENSOMYG00000029599 ##22 COMMD10 (ENSOMYG00000029639) ENSOMYG00000029666 DMXL1 (ENSOMYG00000029889) ENSOMYG00000030749 ENSOMYG00000032692 ENSOMYG00000032698 ENSOMYG00000032706 ENSOMYG00000033160 ENSOMYG00000032870 ENSOMYG00000033498 ENSOMYG00000075343 ENSOMYG00000066547 ENSOMYG00000063487 ENSOMYG00000033559 ENSOMYG00000033573 Salmoninae_a ANCESTRAL SPECIES 10 ENSGT00940000158711.f ENSGT00940000154880.s.a ENSGT00940000155411.c.`b.b ENSGT00390000008742.l ENSGT00940000159850.d ENSGT00940000164634.l ENSGT00910000144252.d.a.c ENSGT00940000160064.b.b ENSGT00940000155192.v ENSGT00940000153912.B.j ENSGT00940000158373.n ENSGT00950000183128.A.b ENSGT00940000158626.l ENSGT00940000158463.d ENSGT00390000018226.i ENSGT00970000193421.C.a.oc ##22 ENSGT00390000001500.h ENSGT00940000156565.s.b ENSGT00940000158343.d.b ENSGT00910000144204.a.b ENSGT00940000166026.b ENSGT00950000183191.b.c ENSGT00940000156812.e ENSGT00940000159488.k.a ENSGT01030000234519.e.a.a.a.b.e.b ENSGT00940000154089.b.h ENSGT00940000157435.a.a.b ENSGT00940000178875 ENSGT00530000064699 ENSGT00940000159244.a.d ENSGT00950000182925.A.b Oncorhynchus ANCESTRAL SPECIES 58 ENSGT00940000158711.f ENSGT00940000154880.s.a ENSGT00940000155411.c.`b.b ENSGT00390000008742.l ENSGT00940000159850.d ENSGT00940000164634.l ENSGT00910000144252.d.a.c ENSGT00940000160064.b.b ENSGT00940000155192.v ENSGT00940000153912.B.j ENSGT00940000158373.n ENSGT00950000183128.A.b ENSGT00940000158626.l ENSGT00940000158463.d ENSGT00390000018226.i ENSGT00970000193421.C.a.oc ##22 ENSGT00940000156565.s.b ENSGT00940000158343.d.b ENSGT00910000144204.a.b ENSGT00940000166026.b ENSGT00950000183191.b.c ENSGT00940000156812.e ENSGT00940000159488.k.a ENSGT01030000234519.e.a.a.a.b.e.b ENSGT00940000154089.b.h ENSGT00940000157435.a.a.b ENSGT00940000178875 ENSGT00940000159786.a ENSGT00950000182925.A.b ENSGT00950000183125.b.a.a.a.a.b.d ENSGT00940000157147.d Rainbow trout MODERN SPECIES 2 ENSOMYG00000005101 ENSOMYG00000005080 ENSOMYG00000005043 smarcad1a (ENSOMYG00000004546) atoh1a (ENSOMYG00000004103) grid2 (ENSOMYG00000003810) ENSOMYG00000041932 ENSOMYG00000065486 ENSOMYG00000062404 ENSOMYG00000051281 CCSER1 (ENSOMYG00000003379) trim36 (ENSOMYG00000003307) PGGT1B (ENSOMYG00000003252) fem1c (ENSOMYG00000003240) TMED7 (ENSOMYG00000003187) AP3S1 (ENSOMYG00000046925) ##22 ENSOMYG00000046915 ENSOMYG00000046643 ENSOMYG00000076041 ENSOMYG00000046474 ENSOMYG00000046466 ENSOMYG00000046455 ENSOMYG00000046396 ENSOMYG00000046379 ENSOMYG00000045443 ENSOMYG00000075476 ENSOMYG00000045241 ENSOMYG00000045206 ENSOMYG00000045198 ENSOMYG00000045186 ENSOMYG00000045179 Oncorhynchus_a ANCESTRAL SPECIES 61 ENSGT00940000158711.f ENSGT00940000154880.s.a ENSGT00940000155411.c.`b.b ENSGT00390000008742.l ENSGT00940000159850.d ENSGT00940000164634.l ENSGT00910000144252.d.a.c ENSGT00940000160064.b.b ENSGT00940000155192.v ENSGT00940000153912.B.j ENSGT00940000158373.n ENSGT00950000183128.A.b ENSGT00940000158626.l ENSGT00940000158463.d ENSGT00390000018226.i ENSGT00970000193421.C.a.oc ##22 ENSGT00940000156565.s.b ENSGT00940000158343.d.b ENSGT00910000144204.a.b ENSGT00940000166026.b ENSGT00950000183191.b.c ENSGT00940000156812.e ENSGT00940000159488.k.a ENSGT01030000234519.e.a.a.a.b.e.b ENSGT00940000154089.b.h ENSGT00940000157435.a.a.b ENSGT00530000064699 ENSGT00940000159244.a.d ENSGT00940000159786.a ENSGT00950000182925.A.b ENSGT00950000183125.b.a.a.a.a.b.d Chinook salmon MODERN SPECIES 3 lysmd3 (ENSOTSG00005038542) adgrv1 (ENSOTSG00005038553) arrdc3a (ENSOTSG00005038650) gkap1 (ENSOTSG00005038652) mapk4 (ENSOTSG00005038654) tspan36 (ENSOTSG00005038656) smarcad1a (ENSOTSG00005038667) atoh1a (ENSOTSG00005039761) grid2 (ENSOTSG00005039765) CCSER1 (ENSOTSG00005039800) trim36 (ENSOTSG00005039802) pggt1b (ENSOTSG00005039806) fem1c (ENSOTSG00005039807) tmed7 (ENSOTSG00005039808) cdo1 (ENSOTSG00005039811) AP3S1 (ENSOTSG00005039813) ##22 sema6a (ENSOTSG00005039834) hsd17b4 (ENSOTSG00005040119) prr16 (ENSOTSG00005040121) SH2B3 (ENSOTSG00005040126) atxn2 (ENSOTSG00005040129) RASEF (ENSOTSG00005040132) ENSOTSG00005040150 mapkapk5 (ENSOTSG00005042038) SMAD4 (ENSOTSG00005042083) ENSOTSG00005042113 ENSOTSG00005042114 PPIC (ENSOTSG00005042115) ENSOTSG00005042116 ENSOTSG00005042117 kif6 (ENSOTSG00005042119) Coho salmon MODERN SPECIES 28 lysmd3 (ENSOKIG00005033760) adgrv1 (ENSOKIG00005033786) arrdc3a (ENSOKIG00005034127) GKAP1 (ENSOKIG00005034158) mapk4 (ENSOKIG00005034179) ENSOKIG00005034190 smarcad1a (ENSOKIG00005034252) atoh1a (ENSOKIG00005034522) grid2 (ENSOKIG00005034548) CCSER1 (ENSOKIG00005034992) trim36 (ENSOKIG00005035020) pggt1b (ENSOKIG00005035195) fem1c (ENSOKIG00005035272) TMED7 (ENSOKIG00005035292) cdo1 (ENSOKIG00005035373) AP3S1 (ENSOKIG00005035418) ##22 SEMA6A (ENSOKIG00005035496) ENSOKIG00005035725 PRR16 (ENSOKIG00005035816) ENSOKIG00005035823 SH2B3 (ENSOKIG00005035854) atxn2 (ENSOKIG00005035911) RASEF (ENSOKIG00005036936) ENSOKIG00005037182 ENSOKIG00005037189 ENSOKIG00005037266 MAPKAPK5 (ENSOKIG00005038172) SMAD4 (ENSOKIG00005038755) ENSOKIG00005038891 ENSOKIG00005038912 PPIC (ENSOKIG00005038940) Salmo ANCESTRAL SPECIES 58 ENSGT00940000154880.s.a ENSGT00940000155411.c.`b.b ENSGT00390000008742.l ENSGT00940000159850.d ENSGT00940000164634.l ENSGT00910000144252.d.a.c ENSGT00940000160064.b.b ENSGT00940000155192.v ENSGT01030000234903.B.b ENSGT00940000153912.B.j ENSGT00940000158373.n ENSGT00950000183128.A.b ENSGT00940000158626.l ENSGT00940000158463.d ENSGT00390000018226.i ENSGT00970000193421.C.a.oc ##22 ENSGT00390000001500.h ENSGT00940000156565.s.b ENSGT00940000158343.d.b ENSGT00910000144204.a.b ENSGT00940000166026.b ENSGT00950000183191.b.c ENSGT00940000156812.e ENSGT00940000159488.k.a ENSGT01030000234519.e.a.a.a.b.e.b ENSGT00940000157435.a.a.b ENSGT00940000159786.a ENSGT00530000064699 ENSGT00940000159244.a.d ENSGT00950000182925.A.b ENSGT00950000183125.b.a.a.a.a.b.d River trout DUPLICATION River trout MODERN SPECIES 39 ENSSTUG00000016810 gkap1 (ENSSTUG00000016802) mapk4 (ENSSTUG00000016800) tspan36 (ENSSTUG00000016794) smarcad1a (ENSSTUG00000016126) atoh1a (ENSSTUG00000016098) grid2 (ENSSTUG00000015841) ENSSTUG00000015827 ENSSTUG00000015824 CCSER1 (ENSSTUG00000015804) trim36 (ENSSTUG00000015742) pggt1b (ENSSTUG00000015673) fem1c (ENSSTUG00000015663) tmed7 (ENSSTUG00000015630) cdo1 (ENSSTUG00000015603) AP3S1 (ENSSTUG00000015550) ##22 COMMD10 (ENSSTUG00000015534) sema6a (ENSSTUG00000015379) ENSSTUG00000015311 prr16 (ENSSTUG00000015305) ENSSTUG00000015298 SH2B3 (ENSSTUG00000015290) atxn2 (ENSSTUG00000015111) RASEF (ENSSTUG00000014934) ENSSTUG00000014212 ENSSTUG00000013519 SMAD4 (ENSSTUG00000013451) ENSSTUG00000013434 PPIC (ENSSTUG00000013407) ENSSTUG00000013400 ENSSTUG00000011504 River trout MODERN SPECIES 477 AP3S1 (ENSSTUG00000024910) ##22 COMMD10 (ENSSTUG00000024889) Huchen DUPLICATION Huchen MODERN SPECIES 97 grid2 (ENSHHUG00000004125) ENSHHUG00000004371 ENSHHUG00000004376 trim36 (ENSHHUG00000004390) pggt1b (ENSHHUG00000004426) fem1c (ENSHHUG00000004462) tmed7 (ENSHHUG00000004472) cdo1 (ENSHHUG00000004514) AP3S1 (ENSHHUG00000004538) ##22 COMMD10 (ENSHHUG00000004676) sema6a (ENSHHUG00000004730) ENSHHUG00000004779 ENSHHUG00000004783 ENSHHUG00000004786 ENSHHUG00000004791 prr16 (ENSHHUG00000004833) ENSHHUG00000004835 atxn2 (ENSHHUG00000004837) Huchen MODERN SPECIES 1995 cdo1 (ENSHHUG00000013813) AP3S1 (ENSHHUG00000013881) ##22 COMMD10 (ENSHHUG00000014079) sema6a (ENSHHUG00000014120) Otomorpha ANCESTRAL SPECIES 71 ENSGT00940000164634 ENSGT00950000183089.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00910000144252.d.a ENSGT01030000235745 ENSGT00940000160064.b ENSGT00940000155192 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000156980.b ENSGT00940000155742.a.b ENSGT00940000157592 Otophysi ANCESTRAL SPECIES 41 ENSGT00940000164634 ENSGT00950000183089.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00910000144252.d.a ENSGT01030000235745 ENSGT00940000160064.b ENSGT00940000155192 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000155742.a.b ENSGT00940000156980.b ENSGT00940000157592 Cyprinoidei ANCESTRAL SPECIES 32 ENSGT00390000001138.a ENSGT00730000111107 ENSGT00940000158593.b ENSGT00390000016940.c.a.a ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000167760 ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a.c ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786.f ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000155742.a.b ENSGT00940000156980.b ENSGT00940000157592 Cyprininae ANCESTRAL SPECIES 327 ENSGT00390000001138.a.n ENSGT00730000111107.b ENSGT00940000158373 ENSGT00950000183128.A.e.a ENSGT00940000167760 ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463.b ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500.j ENSGT00940000156565.d ENSGT00940000158343 ENSGT00910000144204.a.e ENSGT00940000154779.a.b.b.a.a ENSGT00390000001485.f.b ENSGT00940000155798.k ENSGT00940000159786.f ENSGT00940000155852.s.b ENSGT00390000009378 ENSGT00390000008748.a.l ENSGT00940000155742.a.b.b ENSGT00940000157592 ENSGT00940000155603.A.b.c ENSGT00940000154960.a Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 70 trim36 (ENSCARG00000068308) pggt1b (ENSCARG00000068292) fem1c (ENSCARG00000068274) tmed7 (ENSCARG00000068243) cdo1 (ENSCARG00000068233) AP3S1 (ENSCARG00000068214) ##22 Goldfish MODERN SPECIES 26 rpl6 (ENSCARG00000012734) ENSCARG00000012741 tmem230b (ENSCARG00000012763) ENSCARG00000012785 gatd3l (ENSCARG00000012817) ENSCARG00000012826 tmem127 (ENSCARG00000012831) ciao1 (ENSCARG00000012840) ufd1l (ENSCARG00000012865) cdc45 (ENSCARG00000012896) cldn5a (ENSCARG00000012934) zgc:63587 (ENSCARG00000012956) septin5a (ENSCARG00000013207) gp1bb (ENSCARG00000013340) dhx37 (ENSCARG00000013342) ENSCARG00000013353 ##22 ENSCARG00000013364 sema6a (ENSCARG00000013399) ENSCARG00000014524 ENSCARG00000014530 ENSCARG00000014534 PLAT (ENSCARG00000014564) ikbkb (ENSCARG00000014823) ENSCARG00000016215 vdac3 (ENSCARG00000016220) enkd1 (ENSCARG00000016257) polb (ENSCARG00000016275) ENSCARG00000016714 mtmr3 (ENSCARG00000016858) CIT (ENSCARG00000021154) BICDL1 (ENSCARG00000022637) Goldfish MODERN SPECIES 48 ENSCARG00000000550 prr16 (ENSCARG00000000554) hsd17b4 (ENSCARG00000000598) spinb (ENSCARG00000000918) ENSCARG00000000925 ENSCARG00000000929 ENSCARG00000000941 pym1 (ENSCARG00000000946) trim36 (ENSCARG00000000951) pggt1b (ENSCARG00000000974) fem1c (ENSCARG00000000991) ENSCARG00000000996 tmed7 (ENSCARG00000001000) ENSCARG00000001003 cdo1 (ENSCARG00000001010) AP3S1 (ENSCARG00000001034) ##22 sema6a (ENSCARG00000001089) FBXL17 (ENSCARG00000001293) ENSCARG00000001333 ENSCARG00000001335 BNIP3L (ENSCARG00000001350) DPYSL2 (ENSCARG00000001454) adra1aa (ENSCARG00000001879) tmem230b (ENSCARG00000001882) ENSCARG00000001909 gatd3l (ENSCARG00000001983) tmem127 (ENSCARG00000002013) ciao1 (ENSCARG00000002057) ENSCARG00000002094 cldn5a (ENSCARG00000002114) zgc:63587 (ENSCARG00000002381) Cyprininae_a ANCESTRAL SPECIES 308 ENSGT00390000001138.a.m ENSGT00730000111107.a ENSGT00940000158593.b ENSGT00390000016940.c.a.a ENSGT00940000158373.g ENSGT00950000183128.A.e.a ENSGT00940000167760 ENSGT00940000158626 ENSGT00940000158463.b ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500.j ENSGT00940000156565.d ENSGT00390000001500.i.a ENSGT00940000156565.c.b ENSGT00390000000096.a.c ENSGT00910000144204.a.f ENSGT00940000154779.a.b.b.a.b ENSGT00390000001485.f.a ENSGT00940000155798.k ENSGT00940000159786.f ENSGT00390000009378 ENSGT00390000008748.a.l ENSGT00390000008748.a.k.b ENSGT00940000155742.a.b.a ENSGT00940000156980.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 23 ENSCCRG00000062886 pym1 (ENSCCRG00000071269) trim36 (ENSCCRG00000035452) pggt1b (ENSCCRG00000035566) fem1c (ENSCCRG00000035467) TMED7 (ENSCCRG00000058635) CDO1 (ENSCCRG00000019916) AP3S1 (ENSCCRG00000061100) ##22 ENSCCRG00000010412 DMXL1 (ENSCCRG00000034163) hsd17b4 (ENSCCRG00000072453) prr16 (ENSCCRG00000069276) ENSCCRG00000075426 sncaip (ENSCCRG00000014065) SNX2 (ENSCCRG00000023271) PPIC (ENSCCRG00000056653) PRDM6 (ENSCCRG00000010459) ZNF608 (ENSCCRG00000063777) ENSCCRG00000032473 nudt12 (ENSCCRG00000020538) srp19 (ENSCCRG00000053056) ENSCCRG00000065028 ENSCCRG00000020480 Common carp reference MODERN SPECIES 17 ENSCCRG00000002107 mecp2 (ENSCCRG00000076063) ENSCCRG00000002126 cdk20 (ENSCCRG00000010099) ENSCCRG00000035394 ENSCCRG00000000990 ENSCCRG00000000986 ENSCCRG00000047276 pym1 (ENSCCRG00000004095) ENSCCRG00000004092 ENSCCRG00000060878 trim36 (ENSCCRG00000004081) pggt1b (ENSCCRG00000035455) ENSCCRG00000074020 fem1c (ENSCCRG00000010209) ENSCCRG00000062246 ##22 COMMD10 (ENSCCRG00000033470) ENSCCRG00000045985 DMXL1 (ENSCCRG00000014874) prr16 (ENSCCRG00000077774) ENSCCRG00000020634 SNCAIP (ENSCCRG00000005904) SNX2 (ENSCCRG00000002377) PPIC (ENSCCRG00000054597) PRDM6 (ENSCCRG00000065342) CEP120 (ENSCCRG00000053606) ZNF608 (ENSCCRG00000059790) ENSCCRG00000079804 ENSCCRG00000050694 ENSCCRG00000050708 zgc:101664 (ENSCCRG00000050710) Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1069 ENSSGRG00000019606 ##22 COMMD10 (ENSSGRG00000019696) sema6a (ENSSGRG00000019701) prr16 (ENSSGRG00000019806) ENSSGRG00000019807 sncaip (ENSSGRG00000019808) SNX2 (ENSSGRG00000019814) PPIC (ENSSGRG00000019949) Golden-line barbel MODERN SPECIES 1982 tmed7 (ENSSGRG00000017506) cdo1 (ENSSGRG00000017495) AP3S1 (ENSSGRG00000017463) ##22 sema6a (ENSSGRG00000016988) Characiphysae ANCESTRAL SPECIES 43 ENSGT00940000164634 ENSGT00950000183089.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00910000144252.d.a ENSGT01030000235745 ENSGT00940000160064.b ENSGT00940000155192 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000155742.a.b ENSGT00940000156980.b ENSGT00940000157592 Channel catfish MODERN SPECIES 24 MPEG1 (ENSIPUG00000000251) Prf1 (ENSIPUG00000000249) smarcad1a (ENSIPUG00000000242) atoh1 (ENSIPUG00000000238) grid2 (ENSIPUG00000000228) ccser1 (ENSIPUG00000000219) trim36 (ENSIPUG00000000211) pggt1b (ENSIPUG00000000206) CCDC112 (ENSIPUG00000000193) ENSIPUG00000000185 pabpn1 (ENSIPUG00000000180) ENSIPUG00000025119 fem1c (ENSIPUG00000025118) Tmed7 (ENSIPUG00000025117) cdo1 (ENSIPUG00000025116) ap3s1 (ENSIPUG00000025115) ##22 COMMD10 (ENSIPUG00000025113) sema6a (ENSIPUG00000025112) DMXL1 (ENSIPUG00000025111) hsd17b4 (ENSIPUG00000025110) prr16 (ENSIPUG00000025108) ENSIPUG00000025107 Sncaip (ENSIPUG00000025105) SNX2 (ENSIPUG00000025103) ppic (ENSIPUG00000025102) prdm6 (ENSIPUG00000025101) cep120 (ENSIPUG00000025098) ZNF608 (ENSIPUG00000025094) SLC12A2 (ENSIPUG00000025093) Gramd3 (ENSIPUG00000025091) nudt12 (ENSIPUG00000025090) Characiphysae_b ANCESTRAL SPECIES 42 ENSGT00940000164634 ENSGT00950000183089.d ENSGT00390000008048 ENSGT00940000164067.C ENSGT00910000144252.d.a ENSGT01030000235745 ENSGT00940000160064.b ENSGT00940000155192 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000155742.a.b ENSGT00940000156980.b ENSGT00940000157592 Electric eel MODERN SPECIES 37 ubp1 (ENSEEEG00000007583) pdcd6ip (ENSEEEG00000007746) ENSEEEG00000007750 cyhr1 (ENSEEEG00000007751) ENSEEEG00000007752 fabp3 (ENSEEEG00000007764) atoh1a (ENSEEEG00000007767) grid2 (ENSEEEG00000007769) CCSER1 (ENSEEEG00000007776) trim36 (ENSEEEG00000007779) pggt1b (ENSEEEG00000007780) CCDC112 (ENSEEEG00000007784) fem1c (ENSEEEG00000007787) tmed7 (ENSEEEG00000007790) cdo1 (ENSEEEG00000007791) AP3S1 (ENSEEEG00000007792) ##22 COMMD10 (ENSEEEG00000007793) sema6a (ENSEEEG00000007795) DMXL1 (ENSEEEG00000007796) hsd17b4 (ENSEEEG00000007800) prr16 (ENSEEEG00000007843) ENSEEEG00000007846 sncaip (ENSEEEG00000007851) SNX2 (ENSEEEG00000007862) PPIC (ENSEEEG00000008000) PRDM6 (ENSEEEG00000008061) CEP120 (ENSEEEG00000008086) ZNF608 (ENSEEEG00000008277) SLC12A2 (ENSEEEG00000008337) nudt12 (ENSEEEG00000009197) zgc:101664 (ENSEEEG00000009203) Characoidei ANCESTRAL SPECIES 59 ENSGT00940000153912.B ENSGT00940000158373 ENSGT00950000183128.A ENSGT00940000153988.B ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000155742.a.b ENSGT00940000156980.b ENSGT00940000157592 Red-bellied piranha MODERN SPECIES 441 AP3S1 (ENSPNAG00000008759) ##22 COMMD10 (ENSPNAG00000008776) sema6a (ENSPNAG00000008800) DMXL1 (ENSPNAG00000008868) hsd17b4 (ENSPNAG00000008917) prr16 (ENSPNAG00000001252) ENSPNAG00000001258 sncaip (ENSPNAG00000001262) SNX2 (ENSPNAG00000009008) PPIC (ENSPNAG00000009022) PRDM6 (ENSPNAG00000009047) CEP120 (ENSPNAG00000005659) ZNF608 (ENSPNAG00000009121) SLC12A2 (ENSPNAG00000009199) ENSPNAG00000009270 nudt12 (ENSPNAG00000009289) Mexicana tetra MODERN SPECIES 21 ANTXR1 (ENSAMXG00000003169) gfpt1 (ENSAMXG00000003160) nfu1 (ENSAMXG00000036614) ENSAMXG00000003110 ENSAMXG00000029758 ENSAMXG00000003100 PHYHIP (ENSAMXG00000033441) ENSAMXG00000012907 trim36 (ENSAMXG00000033345) pggt1b (ENSAMXG00000012896) CCDC112 (ENSAMXG00000012879) fem1c (ENSAMXG00000012868) ENSAMXG00000038515 tmed7 (ENSAMXG00000038759) cdo1 (ENSAMXG00000012844) AP3S1 (ENSAMXG00000012830) ##22 COMMD10 (ENSAMXG00000033277) sema6a (ENSAMXG00000040240) SEMA6A (ENSAMXG00000012798) DMXL1 (ENSAMXG00000012769) hsd17b4 (ENSAMXG00000012745) prr16 (ENSAMXG00000036225) ENSAMXG00000012712 ENSAMXG00000034775 grid2 (ENSAMXG00000015609) atoh1a (ENSAMXG00000033146) ENSAMXG00000040884 smarcad1a (ENSAMXG00000015470) prf1.5 (ENSAMXG00000030634) MPEG1 (ENSAMXG00000015374) MPEG1 (ENSAMXG00000015353) Clupeiformes ANCESTRAL SPECIES 102 ENSGT00940000167760 ENSGT00940000158626 ENSGT00940000158463 ENSGT00390000018226 ENSGT00970000193421.C.a ##22 ENSGT00390000001500 ENSGT00940000156565 ENSGT00390000000096.a ENSGT00940000158343 ENSGT00910000144204.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000156980.b ENSGT00940000155742.a.b ENSGT00940000157592 Denticle herring MODERN SPECIES 2 PITPNM2 (ENSDCDG00000024572) arl6ip4 (ENSDCDG00000024512) mthfd2 (ENSDCDG00000024489) ENSDCDG00000024465 EFNA5 (ENSDCDG00000024457) FBXL17 (ENSDCDG00000024438) PRXL2C (ENSDCDG00000024392) cdc14b (ENSDCDG00000024287) ENSDCDG00000024274 ENSDCDG00000024270 ENSDCDG00000023973 ENSDCDG00000023891 fem1c (ENSDCDG00000023886) tmed7 (ENSDCDG00000023859) cdo1 (ENSDCDG00000023854) AP3S1 (ENSDCDG00000023850) ##22 COMMD10 (ENSDCDG00000023847) sema6a (ENSDCDG00000022911) DMXL1 (ENSDCDG00000022840) hsd17b4 (ENSDCDG00000020392) prr16 (ENSDCDG00000020344) ENSDCDG00000020314 sncaip (ENSDCDG00000020311) ENSDCDG00000020310 SNX2 (ENSDCDG00000020144) PPIC (ENSDCDG00000020121) PRDM6 (ENSDCDG00000020118) CEP120 (ENSDCDG00000019985) ENSDCDG00000019976 ENSDCDG00000019972 ENSDCDG00000019968 Atlantic herring MODERN SPECIES 23 mboat4 (ENSCHAG00000013679) gldc (ENSCHAG00000013780) coq2 (ENSCHAG00000014282) mak16 (ENSCHAG00000014311) TTI2 (ENSCHAG00000014444) SLC18A1 (ENSCHAG00000014467) ENSCHAG00000014769 ppiaa (ENSCHAG00000014772) ZMIZ2 (ENSCHAG00000014791) OGDH (ENSCHAG00000014924) plekha2 (ENSCHAG00000016614) ENSCHAG00000016659 fem1c (ENSCHAG00000016665) tmed7 (ENSCHAG00000016679) cdo1 (ENSCHAG00000016743) AP3S1 (ENSCHAG00000016762) ##22 COMMD10 (ENSCHAG00000016812) sema6a (ENSCHAG00000016848) DMXL1 (ENSCHAG00000019182) hsd17b4 (ENSCHAG00000019292) ENSCHAG00000019600 prr16 (ENSCHAG00000019612) ENSCHAG00000019642 sncaip (ENSCHAG00000019782) SNX2 (ENSCHAG00000019810) PPIC (ENSCHAG00000019920) PRDM6 (ENSCHAG00000019926) CEP120 (ENSCHAG00000019940) ENSCHAG00000020082 ZNF608 (ENSCHAG00000020091) GRAMD2B (ENSCHAG00000020137) Elephant shark MODERN SPECIES 1539 ENSCMIG00000017607 reep5 (ENSCMIG00000017606) dcp2 (ENSCMIG00000017603) MCC (ENSCMIG00000017545) YTHDC2 (ENSCMIG00000017507) KCNN2 (ENSCMIG00000017502) trim36 (ENSCMIG00000017494) pggt1b (ENSCMIG00000017486) ENSCMIG00000017478 ENSCMIG00000017476 fem1c (ENSCMIG00000017475) ticam2 (ENSCMIG00000017474) tmed7 (ENSCMIG00000017473) ENSCMIG00000017472 cdo1 (ENSCMIG00000017471) AP3S1 (ENSCMIG00000017468) ##22 ENSCMIG00000017466 ENSCMIG00000017455 ARL14EPL (ENSCMIG00000017447) ENSCMIG00000017446 COMMD10 (ENSCMIG00000017442) sema6a (ENSCMIG00000017386) DTWD2 (ENSCMIG00000017351) DMXL1 (ENSCMIG00000017291) tnfaip8 (ENSCMIG00000017256) ENSCMIG00000017252 hsd17b4 (ENSCMIG00000017092) ENSCMIG00000017050 ENSCMIG00000017048 ENSCMIG00000017047 gpc5a (ENSCMIG00000017038) Bilateria ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Ecdysozoa ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Caenorhabditis elegans MODERN SPECIES dapk-1 (WBGene00003400) Y48G8AR.3 (WBGene00021694) Y48G8AR.2 (WBGene00021693) Y48G8AR.8 (WBGene00271777) grh-1 (WBGene00001707) Y48G8AL.15 (WBGene00021692) Y48G8AL.13 (WBGene00021691) Y48G8AL.12 (WBGene00021690) Y48G8AL.16 (WBGene00195068) herc-1 (WBGene00021685) nsun-2 (WBGene00021686) smg-2 (WBGene00004880) haf-6 (WBGene00001816) Y48G8AL.7 (WBGene00021687) rpl-17 (WBGene00004429) aps-3 (WBGene00000165) ##22 znf-236 (WBGene00021689) ceh-45 (WBGene00022837) ZK993.5 (WBGene00236809) ZK993.2 (WBGene00022838) R06A10.4 (WBGene00019911) R06A10.5 (WBGene00044895) R06A10.1 (WBGene00019909) gsa-1 (WBGene00001745) npr-23 (WBGene00021328) vps-4 (WBGene00021334) Y34D9A.8 (WBGene00021333) glrx-10 (WBGene00021331) Y34D9A.7 (WBGene00021332) Y34D9A.3 (WBGene00021329) spd-1 (WBGene00004952) Fruitfly MODERN SPECIES 17 CG2812 (FBgn0034931) CG3735 (FBgn0034933) Taldo (FBgn0023477) Galphas (FBgn0001123) Orcokinin (FBgn0034935) Stoml2 (FBgn0034936) fzr2 (FBgn0034937) CG3803 (FBgn0034938) thoc5 (FBgn0034939) CG16787 (FBgn0034940) alpha-Catr (FBgn0029105) CG13566 (FBgn0034942) Fmo-1 (FBgn0034943) Alas (FBgn0020764) CG34213 (FBgn0085242) or (FBgn0003008) ##22 CG10904 (FBgn0034945) CG3065 (FBgn0034946) mr (FBgn0002791) PPP1R15 (FBgn0034948) Sox14 (FBgn0005612) Phm (FBgn0283509) CG30178 (FBgn0050178) Pask (FBgn0034950) CG3860 (FBgn0034951) Unc-89 (FBgn0053519) CG4324 (FBgn0034956) Rsph4a (FBgn0034957) CG3907 (FBgn0034958) Xxylt (FBgn0034959) Ak2 (FBgn0283494) Chordata ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Ciona ANCESTRAL SPECIES 825 ENSGT00390000008250 ENSGT00970000193421.C.b ##22 Ciona savignyi MODERN SPECIES 203 ENSCSAVG00000003279 ENSCSAVG00000003346 ENSCSAVG00000003348 ENSCSAVG00000003350 ENSCSAVG00000004045 ENSCSAVG00000004046 ENSCSAVG00000004048 ENSCSAVG00000004108 ENSCSAVG00000004110 ENSCSAVG00000004117 ENSCSAVG00000004128 ENSCSAVG00000004134 ENSCSAVG00000004135 ENSCSAVG00000004163 ENSCSAVG00000004180 ENSCSAVG00000004187 ##22 ENSCSAVG00000004198 ENSCSAVG00000004273 ENSCSAVG00000004697 ENSCSAVG00000004720 ENSCSAVG00000004761 ENSCSAVG00000004767 ENSCSAVG00000005145 ENSCSAVG00000005578 ENSCSAVG00000005585 ENSCSAVG00000005586 ENSCSAVG00000005609 ENSCSAVG00000005611 ENSCSAVG00000005612 ENSCSAVG00000005643 ENSCSAVG00000005676 Ciona intestinalis MODERN SPECIES 1 ENSCING00000000152 ENSCING00000023360 ENSCING00000013919 ENSCING00000019257 ENSCING00000021024 ENSCING00000006310 ENSCING00000022004 ENSCING00000009891 ENSCING00000024674 ciatpsyna (ENSCING00000006323) ENSCING00000020311 ENSCING00000013922 ENSCING00000022397 ENSCING00000006319 ENSCING00000021719 ENSCING00000024414 ##22 ENSCING00000013920 ENSCING00000020128 ENSCING00000020338 ENSCING00000017363 ENSCING00000020103 ENSCING00000017364 ENSCING00000013923 ENSCING00000013927 ENSCING00000024836 ENSCING00000022590 ENSCING00000006431 ENSCING00000024889 ENSCING00000006430 ENSCING00000006429 ENSCING00000013925 Vertebrata ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Lamprey MODERN SPECIES 70 ENSPMAG00000009080 ENSPMAG00000010207 ENSPMAG00000009076 ENSPMAG00000009074 ENSPMAG00000009070 ENSPMAG00000009069 ENSPMAG00000009066 ENSPMAG00000009063 ENSPMAG00000009046 ENSPMAG00000009040 ENSPMAG00000009038 ENSPMAG00000009027 ENSPMAG00000009014 ENSPMAG00000009007 ENSPMAG00000009004 ap3s2 (ENSPMAG00000008994) ##22 ENSPMAG00000008980 ENSPMAG00000008976 CA2 (ENSPMAG00000008967) rpl13 (ENSPMAG00000008964) C14orf119 (ENSPMAG00000008962) rpl13 (ENSPMAG00000008954) ENSPMAG00000008951 ORC2 (ENSPMAG00000008946) ENSPMAG00000008931 DPY19L3 (ENSPMAG00000008921) ENSPMAG00000008914 ENSPMAG00000008881 #34 ENSPMAG00000008878 ENSPMAG00000008874 Hagfish MODERN SPECIES 264 ENSEBUG00000011118 ENSEBUG00000009711 ENSEBUG00000007557 ap3s2 (ENSEBUG00000010217) ##22 ENSEBUG00000013356 samm50l (ENSEBUG00000004210) ENSEBUG00000005360 prmt1 (ENSEBUG00000002597) CD151 (ENSEBUG00000004231) TSPAN4 (ENSEBUG00000013847) ENSEBUG00000015323 ENSEBUG00000015267 ENSEBUG00000017088 ENSEBUG00000013390 ENSEBUG00000009819 gatd1 (ENSEBUG00000000296) tnnt3a (ENSEBUG00000005308) ENSEBUG00000008088 PDE9A (ENSEBUG00000000859) Gnathostomata ANCESTRAL SPECIES 1042 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876 Elephant shark MODERN SPECIES 1490 zgc:158482 (ENSCMIG00000018766) gabpb1 (ENSCMIG00000018784) USP8 (ENSCMIG00000018799) USP50 (ENSCMIG00000018807) trpm7 (ENSCMIG00000018835) SPPL2A (ENSCMIG00000018858) ENSCMIG00000018874 mibp2 (ENSCMIG00000018877) sqor (ENSCMIG00000018881) BLOC1S6 (ENSCMIG00000018887) slc30a4 (ENSCMIG00000018888) ENSCMIG00000018890 spata5l1 (ENSCMIG00000018891) ENSCMIG00000018892 arpin (ENSCMIG00000018893) ap3s2 (ENSCMIG00000018895) ##22 anpepb.1 (ENSCMIG00000018953) mtfmt (ENSCMIG00000019022) si:ch73-314g15.3 (ENSCMIG00000019026) cilp (ENSCMIG00000019035) parp16 (ENSCMIG00000019044) ENSCMIG00000019046 IGDCC3 (ENSCMIG00000019047) IGDCC4 (ENSCMIG00000019052) DPP8 (ENSCMIG00000019112) ENSCMIG00000019137 rasl12 (ENSCMIG00000019138) KBTBD13 (ENSCMIG00000019140) ENSCMIG00000019142 ENSCMIG00000019146 clpxa (ENSCMIG00000019178) Euteleostomi ANCESTRAL SPECIES 775 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a Sarcopterygii ANCESTRAL SPECIES 350 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00950000182920.a ENSGT00390000014273.a ENSGT00390000009995 ENSGT01050000244841.A.a.b ENSGT00530000063712.a.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b Tetrapoda ANCESTRAL SPECIES 50 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b Anura ANCESTRAL SPECIES ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000018488 ENSGT00910000144335 ENSGT00390000000993 ENSGT00940000153636.a ENSGT00940000159424 ENSGT00940000158198 ENSGT00530000063712.a.a.b ENSGT00530000063712.a.a.a.b ENSGT00530000063712.a.a.a.a ENSGT01050000244841.A.a.b ENSGT00390000009995.x ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000164158.B Frog MODERN SPECIES 3 fes (ENSXETG00000015460) man2a2 (ENSXETG00000015458) ENSXETG00000044928 unc45a (ENSXETG00000015452) rccd1 (ENSXETG00000049099) prc1 (ENSXETG00000015449) vps33b (ENSXETG00000015443) ttll13p (ENSXETG00000041103) gdpgp1 (ENSXETG00000012962) cib1 (ENSXETG00000012964) sema4b (ENSXETG00000012967) ENSXETG00000043241 idh2 (ENSXETG00000027622) znf710 (ENSXETG00000012971) arpin (ENSXETG00000012972) ap3s2 (ENSXETG00000043330) ##22 anpep (ENSXETG00000012973) cfap161 (ENSXETG00000012978) tlnrd1 (ENSXETG00000012979) mesd (ENSXETG00000012980) cemip (ENSXETG00000012981) abhd17c (ENSXETG00000027627) arnt2 (ENSXETG00000012988) mespb (ENSXETG00000027628) ENSXETG00000040888 mespa (ENSXETG00000017725) gnrhr2 (ENSXETG00000017726) ENSXETG00000030224 ENSXETG00000049073 pex11a (ENSXETG00000037575) plin1 (ENSXETG00000017733) Amniota ANCESTRAL SPECIES 62 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b Mammalia ANCESTRAL SPECIES 45 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00390000009453 ENSGT00940000165395 ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000164158.B ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 Platypus MODERN SPECIES 84 FURIN (ENSOANG00000047447) FES (ENSOANG00000046391) MAN2A2 (ENSOANG00000008973) UNC45A (ENSOANG00000022352) PRC1 (ENSOANG00000038100) TTLL13 (ENSOANG00000006840) ENSOANG00000039607 HDDC3 (ENSOANG00000043013) VPS33B (ENSOANG00000040875) GDPGP1 (ENSOANG00000036614) CIB1 (ENSOANG00000050542) SEMA4B (ENSOANG00000013510) IDH2 (ENSOANG00000015236) ZNF710 (ENSOANG00000046750) ARPIN (ENSOANG00000036108) AP3S2 (ENSOANG00000041499) ##22 ANPEP (ENSOANG00000000369) ENSOANG00000037378 RHO (ENSOANG00000003778) PLXND1 (ENSOANG00000050054) IFT122 (ENSOANG00000010892) MBD4 (ENSOANG00000004589) ENSOANG00000028240 RPL32 (ENSOANG00000037596) ENSOANG00000040437 ENSOANG00000003781 SEC13 (ENSOANG00000009346) ENSOANG00000048399 PDZRN3 (ENSOANG00000042812) ENSOANG00000036060 GXYLT2 (ENSOANG00000036924) Theria ANCESTRAL SPECIES 22 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000164158.B ENSGT00940000177011 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Marsupialia ANCESTRAL SPECIES ENSGT01030000234638.b.b.c.a ENSGT00390000009453.e.a ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453.f ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.j ENSGT00530000063712.a.a.i ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000164158.B ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Opossum MODERN SPECIES BLM (ENSMODG00000019449) FURIN (ENSMODG00000019452) FES (ENSMODG00000019456) MAN2A2 (ENSMODG00000019461) ENSMODG00000019476 UNC45A (ENSMODG00000019488) ENSMODG00000019495 VPS33B (ENSMODG00000019498) TTLL13 (ENSMODG00000019503) GDPGP1 (ENSMODG00000019506) CIB1 (ENSMODG00000019510) SEMA4B (ENSMODG00000019513) IDH2 (ENSMODG00000019516) ZNF710 (ENSMODG00000019518) ARPIN (ENSMODG00000019519) AP3S2 (ENSMODG00000042381) ##22 ANPEP (ENSMODG00000019534) ENSMODG00000024701 ENSMODG00000019538 ENSMODG00000019542 PEX11A (ENSMODG00000038591) PLIN1 (ENSMODG00000019544) KIF7 (ENSMODG00000019548) ENSMODG00000024697 RHCG (ENSMODG00000019555) POLG (ENSMODG00000019564) FANCI (ENSMODG00000019568) RLBP1 (ENSMODG00000019571) ABHD2 (ENSMODG00000019573) ENSMODG00000019575 HAPLN3 (ENSMODG00000019577) Marsupialia_b ANCESTRAL SPECIES ENSGT01030000234638.b.b.c.a ENSGT00390000009453.e.a ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453.f ENSGT00940000156813 ENSGT00390000011608 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.j ENSGT00530000063712.a.a.i ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000164158.B ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000000683 ENSSHAG00000032156 ENSSHAG00000007988 ENSSHAG00000030066 MAN2A2 (ENSSHAG00000009713) ENSSHAG00000009935 UNC45A (ENSSHAG00000010200) RCCD1 (ENSSHAG00000010570) ENSSHAG00000010615 ENSSHAG00000032047 CIB1 (ENSSHAG00000011127) SEMA4B (ENSSHAG00000011146) IDH2 (ENSSHAG00000011631) ZNF710 (ENSSHAG00000024570) ENSSHAG00000031900 ENSSHAG00000028069 ##22 ANPEP (ENSSHAG00000013070) ENSSHAG00000013251 ENSSHAG00000013698 PLIN1 (ENSSHAG00000013876) KIF7 (ENSSHAG00000013999) TICRR (ENSSHAG00000014111) RHCG (ENSSHAG00000014529) POLG (ENSSHAG00000015373) FANCI (ENSSHAG00000015462) RLBP1 (ENSSHAG00000028097) ABHD2 (ENSSHAG00000015772) ENSSHAG00000016335 HAPLN3 (ENSSHAG00000016429) ENSSHAG00000023231 AEN (ENSSHAG00000017070) Diprotodontia ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Wallaby MODERN SPECIES 11120 AP3S2 (ENSMEUG00000003421) ##22 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Carnivora ANCESTRAL SPECIES ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Caniformia ANCESTRAL SPECIES 12 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Canidae ANCESTRAL SPECIES 21 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00940000164888.d ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Canis_lupus ANCESTRAL SPECIES 23 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00940000164888.d ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Dingo MODERN SPECIES 138 MAN2A2 (ENSCAFG00020016162) HDDC3 (ENSCAFG00020016289) UNC45A (ENSCAFG00020016291) RCCD1 (ENSCAFG00020016296) PRC1 (ENSCAFG00020016312) VPS33B (ENSCAFG00020016359) NGRN (ENSCAFG00020016363) TTLL13 (ENSCAFG00020016366) GDPGP1 (ENSCAFG00020016372) CIB1 (ENSCAFG00020016373) SEMA4B (ENSCAFG00020016378) ENSCAFG00020016404 IDH2 (ENSCAFG00020016405) ZNF710 (ENSCAFG00020016407) ARPIN (ENSCAFG00020016412) AP3S2 (ENSCAFG00020016415) ##22 ANPEP (ENSCAFG00020016494) MESP2 (ENSCAFG00020018337) MESP1 (ENSCAFG00020018338) WDR93 (ENSCAFG00020018339) PEX11A (ENSCAFG00020018344) PLIN1 (ENSCAFG00020018345) ENSCAFG00020018349 KIF7 (ENSCAFG00020018353) TICRR (ENSCAFG00020018451) RHCG (ENSCAFG00020018471) POLG (ENSCAFG00020018479) FANCI (ENSCAFG00020018514) RLBP1 (ENSCAFG00020018734) ABHD2 (ENSCAFG00020018746) MFGE8 (ENSCAFG00020018748) Dog MODERN SPECIES 22 HDDC3 (ENSCAFG00845002145) MAN2A2 (ENSCAFG00845001985) UNC45A (ENSCAFG00845001793) RCCD1 (ENSCAFG00845001726) PRC1 (ENSCAFG00845001624) VPS33B (ENSCAFG00845001444) NGRN (ENSCAFG00845001368) TTLL13 (ENSCAFG00845001321) GDPGP1 (ENSCAFG00845001287) CIB1 (ENSCAFG00845001241) SEMA4B (ENSCAFG00845001026) ENSCAFG00845001000 IDH2 (ENSCAFG00845000909) ZNF710 (ENSCAFG00845000843) ARPIN (ENSCAFG00845000787) AP3S2 (ENSCAFG00845000760) ##22 ANPEP (ENSCAFG00845000639) MESP2 (ENSCAFG00845000550) MESP1 (ENSCAFG00845000532) WDR93 (ENSCAFG00845000490) PEX11A (ENSCAFG00845000454) PLIN1 (ENSCAFG00845000427) KIF7 (ENSCAFG00845000394) TICRR (ENSCAFG00845000341) RHCG (ENSCAFG00845000295) POLG (ENSCAFG00845004161) ENSCAFG00845004117 FANCI (ENSCAFG00845003918) RLBP1 (ENSCAFG00845003818) ABHD2 (ENSCAFG00845003807) MFGE8 (ENSCAFG00845003786) Red fox MODERN SPECIES 1 MAN2A2 (ENSVVUG00000006455) UNC45A (ENSVVUG00000006491) ENSVVUG00000006500 PRC1 (ENSVVUG00000006549) VPS33B (ENSVVUG00000006570) ENSVVUG00000006598 TTLL13 (ENSVVUG00000006600) GDPGP1 (ENSVVUG00000006616) CIB1 (ENSVVUG00000006622) SEMA4B (ENSVVUG00000006642) ENSVVUG00000006658 IDH2 (ENSVVUG00000006665) ENSVVUG00000006666 ZNF710 (ENSVVUG00000006696) ARPIN (ENSVVUG00000006717) AP3S2 (ENSVVUG00000006723) ##22 ANPEP (ENSVVUG00000006820) ENSVVUG00000011126 ENSVVUG00000011128 WDR93 (ENSVVUG00000011139) PEX11A (ENSVVUG00000011166) PLIN1 (ENSVVUG00000011170) ENSVVUG00000011178 KIF7 (ENSVVUG00000011186) TICRR (ENSVVUG00000011314) RHCG (ENSVVUG00000011374) POLG (ENSVVUG00000011407) FANCI (ENSVVUG00000011438) RLBP1 (ENSVVUG00000011554) ENSVVUG00000011559 ABHD2 (ENSVVUG00000011601) Caniformia_b ANCESTRAL SPECIES 15 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Ursidae ANCESTRAL SPECIES 40 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813.n ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927.d ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026.d ENSGT00950000182902.b.a ENSGT00940000156049 Ursus ANCESTRAL SPECIES 66 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813.n ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927.d ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026.d ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628.a ENSGT00940000155971 Polar bear MODERN SPECIES 145 BLM (ENSUMAG00000009105) FURIN (ENSUMAG00000009053) FES (ENSUMAG00000009012) MAN2A2 (ENSUMAG00000008884) HDDC3 (ENSUMAG00000008863) UNC45A (ENSUMAG00000008248) PRC1 (ENSUMAG00000008105) VPS33B (ENSUMAG00000008072) NGRN (ENSUMAG00000008064) TTLL13 (ENSUMAG00000008045) CIB1 (ENSUMAG00000008025) SEMA4B (ENSUMAG00000008009) ZNF710 (ENSUMAG00000007999) IDH2 (ENSUMAG00000007994) ENSUMAG00000007991 AP3S2 (ENSUMAG00000007987) ##22 ANPEP (ENSUMAG00000007118) WDR93 (ENSUMAG00000006985) PEX11A (ENSUMAG00000006980) PLIN1 (ENSUMAG00000006973) ENSUMAG00000006968 TICRR (ENSUMAG00000006936) RHCG (ENSUMAG00000006913) POLG (ENSUMAG00000006805) FANCI (ENSUMAG00000006372) RLBP1 (ENSUMAG00000006295) ABHD2 (ENSUMAG00000006292) MFGE8 (ENSUMAG00000006287) ENSUMAG00000006284 ENSUMAG00000006277 ENSUMAG00000006274 American black bear MODERN SPECIES 6228 AP3S2 (ENSUAMG00000006053) ##22 Giant Panda MODERN SPECIES 19 FURIN (ENSAMEG00000013812) FES (ENSAMEG00000013803) MAN2A2 (ENSAMEG00000013741) HDDC3 (ENSAMEG00000013735) UNC45A (ENSAMEG00000013689) RCCD1 (ENSAMEG00000013688) PRC1 (ENSAMEG00000013667) ENSAMEG00000013607 ENSAMEG00000013570 GDPGP1 (ENSAMEG00000018961) CIB1 (ENSAMEG00000013551) SEMA4B (ENSAMEG00000013517) IDH2 (ENSAMEG00000013489) ZNF710 (ENSAMEG00000027552) ARPIN (ENSAMEG00000026649) AP3S2 (ENSAMEG00000002650) ##22 ANPEP (ENSAMEG00000002535) MESP2 (ENSAMEG00000028927) MESP1 (ENSAMEG00000027144) ENSAMEG00000026190 PEX11A (ENSAMEG00000031216) PLIN1 (ENSAMEG00000013172) KIF7 (ENSAMEG00000013138) ENSAMEG00000031007 TICRR (ENSAMEG00000013104) RHCG (ENSAMEG00000013063) POLG (ENSAMEG00000013009) FANCI (ENSAMEG00000012957) RLBP1 (ENSAMEG00000012944) ABHD2 (ENSAMEG00000012924) ENSAMEG00000012883 Mustelinae ANCESTRAL SPECIES 36 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a.b ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 Ferret MODERN SPECIES 260 UNC45A (ENSMPUG00000015700) RCCD1 (ENSMPUG00000015705) PRC1 (ENSMPUG00000015710) ENSMPUG00000015714 ENSMPUG00000015716 NGRN (ENSMPUG00000015718) TTLL13 (ENSMPUG00000015719) GDPGP1 (ENSMPUG00000015731) CIB1 (ENSMPUG00000015732) SEMA4B (ENSMPUG00000015735) IDH2 (ENSMPUG00000015739) ZNF710 (ENSMPUG00000015742) ENSMPUG00000015743 ENSMPUG00000015746 ARPIN (ENSMPUG00000015747) AP3S2 (ENSMPUG00000015749) ##22 ANPEP (ENSMPUG00000015751) ENSMPUG00000015755 WDR93 (ENSMPUG00000015756) ENSMPUG00000019759 PEX11A (ENSMPUG00000015757) PLIN1 (ENSMPUG00000015758) KIF7 (ENSMPUG00000015768) TICRR (ENSMPUG00000015785) RHCG (ENSMPUG00000015787) POLG (ENSMPUG00000015789) FANCI (ENSMPUG00000015791) RLBP1 (ENSMPUG00000015795) ABHD2 (ENSMPUG00000015798) ENSMPUG00000015799 MFGE8 (ENSMPUG00000015809) American mink MODERN SPECIES 81 FES (ENSNVIG00000016604) MAN2A2 (ENSNVIG00000016854) HDDC3 (ENSNVIG00000016903) UNC45A (ENSNVIG00000016921) RCCD1 (ENSNVIG00000016944) PRC1 (ENSNVIG00000016978) VPS33B (ENSNVIG00000017077) NGRN (ENSNVIG00000017123) TTLL13 (ENSNVIG00000017133) GDPGP1 (ENSNVIG00000017169) CIB1 (ENSNVIG00000017174) SEMA4B (ENSNVIG00000017214) IDH2 (ENSNVIG00000017219) ZNF710 (ENSNVIG00000017271) ARPIN (ENSNVIG00000017279) AP3S2 (ENSNVIG00000017296) ##22 ANPEP (ENSNVIG00000017322) MESP1 (ENSNVIG00000017382) WDR93 (ENSNVIG00000017392) PEX11A (ENSNVIG00000017459) PLIN1 (ENSNVIG00000017478) KIF7 (ENSNVIG00000017514) ENSNVIG00000017536 TICRR (ENSNVIG00000017550) RHCG (ENSNVIG00000017639) POLG (ENSNVIG00000017667) FANCI (ENSNVIG00000017781) RLBP1 (ENSNVIG00000017952) ABHD2 (ENSNVIG00000017974) MFGE8 (ENSNVIG00000017997) HAPLN3 (ENSNVIG00000018003) Felidae ANCESTRAL SPECIES 1 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT01090000261680 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Panthera ANCESTRAL SPECIES 31 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT01090000261680 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Tiger MODERN SPECIES 112 ENSPTIG00000016594 FURIN (ENSPTIG00000016644) FES (ENSPTIG00000017453) MAN2A2 (ENSPTIG00000018511) HDDC3 (ENSPTIG00000019000) UNC45A (ENSPTIG00000019053) PRC1 (ENSPTIG00000019480) VPS33B (ENSPTIG00000019885) NGRN (ENSPTIG00000000316) TTLL13 (ENSPTIG00000001412) CIB1 (ENSPTIG00000005450) SEMA4B (ENSPTIG00000005682) IDH2 (ENSPTIG00000006500) ZNF710 (ENSPTIG00000007643) ENSPTIG00000007869 AP3S2 (ENSPTIG00000007965) ##22 ANPEP (ENSPTIG00000008472) ENSPTIG00000000413 WDR93 (ENSPTIG00000009032) PEX11A (ENSPTIG00000010681) ENSPTIG00000011083 ENSPTIG00000011088 TICRR (ENSPTIG00000011133) RHCG (ENSPTIG00000012772) POLG (ENSPTIG00000012981) FANCI (ENSPTIG00000014324) RLBP1 (ENSPTIG00000017254) ABHD2 (ENSPTIG00000017354) ENSPTIG00000017689 HAPLN3 (ENSPTIG00000018049) ENSPTIG00000018270 Panthera_a ANCESTRAL SPECIES 33 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT01090000261680 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855.a ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 leopard MODERN SPECIES 35 FES (ENSPPRG00000006609) MAN2A2 (ENSPPRG00000006998) HDDC3 (ENSPPRG00000008187) UNC45A (ENSPPRG00000010555) RCCD1 (ENSPPRG00000011903) PRC1 (ENSPPRG00000013559) VPS33B (ENSPPRG00000017429) NGRN (ENSPPRG00000017958) TTLL13 (ENSPPRG00000022377) GDPGP1 (ENSPPRG00000020630) CIB1 (ENSPPRG00000025089) SEMA4B (ENSPPRG00000025080) IDH2 (ENSPPRG00000024990) ZNF710 (ENSPPRG00000024979) ARPIN (ENSPPRG00000024893) AP3S2 (ENSPPRG00000024758) ##22 ENSPPRG00000024635 ANPEP (ENSPPRG00000024242) MESP2 (ENSPPRG00000024134) MESP1 (ENSPPRG00000023802) WDR93 (ENSPPRG00000022782) PEX11A (ENSPPRG00000000265) PLIN1 (ENSPPRG00000000477) ENSPPRG00000020818 KIF7 (ENSPPRG00000001457) TICRR (ENSPPRG00000004833) RHCG (ENSPPRG00000006129) POLG (ENSPPRG00000007408) FANCI (ENSPPRG00000021654) RLBP1 (ENSPPRG00000022255) ABHD2 (ENSPPRG00000024686) lion MODERN SPECIES 6 FES (ENSPLOG00000018837) MAN2A2 (ENSPLOG00000019142) HDDC3 (ENSPLOG00000019175) UNC45A (ENSPLOG00000019288) RCCD1 (ENSPLOG00000019497) PRC1 (ENSPLOG00000019636) VPS33B (ENSPLOG00000019738) NGRN (ENSPLOG00000020027) TTLL13 (ENSPLOG00000020051) GDPGP1 (ENSPLOG00000020214) CIB1 (ENSPLOG00000020228) SEMA4B (ENSPLOG00000020259) IDH2 (ENSPLOG00000020298) ZNF710 (ENSPLOG00000020382) ARPIN (ENSPLOG00000020397) ENSPLOG00000020444 ##22 ANPEP (ENSPLOG00000020496) MESP2 (ENSPLOG00000020632) MESP1 (ENSPLOG00000020658) WDR93 (ENSPLOG00000020687) PEX11A (ENSPLOG00000020785) PLIN1 (ENSPLOG00000020813) KIF7 (ENSPLOG00000020910) ENSPLOG00000020984 TICRR (ENSPLOG00000020994) RHCG (ENSPLOG00000021115) POLG (ENSPLOG00000021165) ENSPLOG00000021409 HAPLN3 (ENSPLOG00000021908) ENSPLOG00000021921 ISG20 (ENSPLOG00000021939) Cat MODERN SPECIES 237 FES (ENSFCAG00000006093) MAN2A2 (ENSFCAG00000006094) HDDC3 (ENSFCAG00000006096) UNC45A (ENSFCAG00000006097) RCCD1 (ENSFCAG00000006098) PRC1 (ENSFCAG00000032022) VPS33B (ENSFCAG00000011960) NGRN (ENSFCAG00000031552) TTLL13 (ENSFCAG00000005272) GDPGP1 (ENSFCAG00000005271) CIB1 (ENSFCAG00000022553) SEMA4B (ENSFCAG00000022585) IDH2 (ENSFCAG00000027219) ZNF710 (ENSFCAG00000005268) ARPIN (ENSFCAG00000042625) AP3S2 (ENSFCAG00000038931) ##22 ANPEP (ENSFCAG00000008974) MESP2 (ENSFCAG00000043356) MESP1 (ENSFCAG00000008973) WDR93 (ENSFCAG00000008972) PEX11A (ENSFCAG00000044187) PLIN1 (ENSFCAG00000042547) KIF7 (ENSFCAG00000013350) ENSFCAG00000033324 TICRR (ENSFCAG00000013349) RHCG (ENSFCAG00000012890) POLG (ENSFCAG00000012888) FANCI (ENSFCAG00000012886) RLBP1 (ENSFCAG00000012884) ABHD2 (ENSFCAG00000012882) MFGE8 (ENSFCAG00000006622) Laurasiatheria_c DUPLICATION Laurasiatheria_c ANCESTRAL SPECIES ENSGT00970000193421.C.b.a ##22 Equus ANCESTRAL SPECIES 4 ENSGT00940000155971 ENSGT00940000159628 ENSGT00940000156049 ENSGT00950000182902.b.a ENSGT00940000160026 ENSGT00390000005855 ENSGT00390000000453 ENSGT00950000182844.b.b.b ENSGT00390000005222 ENSGT00940000159749 ENSGT00520000059044 ENSGT00950000182920.a ENSGT00390000014273.a ENSGT00390000009995 ENSGT00530000063712.a.a.l ENSGT00970000193421.C.b.a ##22 ENSGT00940000154876.b.k ENSGT00530000063712.a.a.k ENSGT00940000154876.b.l ENSGT00950000184993 ENSGT00970000193421.C.b.b ##22 ENSGT00530000064251 ENSGT00940000161170 ENSGT00390000012547.a ENSGT00940000154870.D ENSGT00940000158927 ENSGT00390000016718 ENSGT00940000161367 ENSGT00390000014472 ENSGT00940000156813 ENSGT00390000009453 Donkey MODERN SPECIES 11 ISG20 (ENSEASG00005015360) ENSEASG00005015358 HAPLN3 (ENSEASG00005015355) MFGE8 (ENSEASG00005015354) ABHD2 (ENSEASG00005015353) RLBP1 (ENSEASG00005015350) FANCI (ENSEASG00005015261) POLG (ENSEASG00005015232) RHCG (ENSEASG00005015218) ENSEASG00005015180 ENSEASG00005015200 PLIN1 (ENSEASG00005036082) PEX11A (ENSEASG00005029106) WDR93 (ENSEASG00005015162) MESP1 (ENSEASG00005026694) ENSEASG00005032063 ##22 ENSEASG00005015128 MESP2 (ENSEASG00005029954) ENSEASG00005038359 ENSEASG00005034086 AP3S2 (ENSEASG00005006473) ##22 ARPIN (ENSEASG00005006475) ZNF710 (ENSEASG00005006478) IDH2 (ENSEASG00005006481) SEMA4B (ENSEASG00005006485) CIB1 (ENSEASG00005006488) GDPGP1 (ENSEASG00005035001) TTLL13 (ENSEASG00005006495) ENSEASG00005027932 ENSEASG00005006502 PRC1 (ENSEASG00005006516) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Chiroptera ANCESTRAL SPECIES 43 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855.d ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Megabat MODERN SPECIES 942 ARPIN (ENSPVAG00000010575) AP3S2 (ENSPVAG00000010574) ##22 ANPEP (ENSPVAG00000010572) MESP1 (ENSPVAG00000010571) WDR93 (ENSPVAG00000010569) PEX11A (ENSPVAG00000010568) PLIN1 (ENSPVAG00000010567) KIF7 (ENSPVAG00000010566) TICRR (ENSPVAG00000010563) Microchiroptera ANCESTRAL SPECIES 42 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855.d ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Microbat MODERN SPECIES 1912 ARPIN (ENSMLUG00000029374) AP3S2 (ENSMLUG00000002861) ##22 ANPEP (ENSMLUG00000030629) Equus ANCESTRAL SPECIES 4 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.b ##22 ENSGT00950000184993 ENSGT00940000154876.b.l ENSGT00530000063712.a.a.k ENSGT00940000154876.b.k ENSGT00970000193421.C.b.a ##22 ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 Horse MODERN SPECIES FURIN (ENSECAG00000019913) FES (ENSECAG00000000836) MAN2A2 (ENSECAG00000018866) HDDC3 (ENSECAG00000017200) UNC45A (ENSECAG00000018965) RCCD1 (ENSECAG00000017879) PRC1 (ENSECAG00000017906) VPS33B (ENSECAG00000025016) TTLL13 (ENSECAG00000013527) GDPGP1 (ENSECAG00000004439) CIB1 (ENSECAG00000018203) SEMA4B (ENSECAG00000022668) IDH2 (ENSECAG00000007105) ZNF710 (ENSECAG00000023093) ARPIN (ENSECAG00000023388) AP3S2 (ENSECAG00000024044) ##22 ENSECAG00000034460 ENSECAG00000028467 ENSECAG00000036248 ENSECAG00000037098 ENSECAG00000047741 ENSECAG00000029256 MESP1 (ENSECAG00000039551) WDR93 (ENSECAG00000004446) PEX11A (ENSECAG00000010027) PLIN1 (ENSECAG00000013202) KIF7 (ENSECAG00000019462) ENSECAG00000019184 TICRR (ENSECAG00000021453) RHCG (ENSECAG00000008418) POLG (ENSECAG00000007781) Donkey MODERN SPECIES 11 FES (ENSEASG00005006705) MAN2A2 (ENSEASG00005006699) HDDC3 (ENSEASG00005006697) UNC45A (ENSEASG00005006694) RCCD1 (ENSEASG00005006692) PRC1 (ENSEASG00005006516) ENSEASG00005006502 ENSEASG00005027932 TTLL13 (ENSEASG00005006495) GDPGP1 (ENSEASG00005035001) CIB1 (ENSEASG00005006488) SEMA4B (ENSEASG00005006485) IDH2 (ENSEASG00005006481) ZNF710 (ENSEASG00005006478) ARPIN (ENSEASG00005006475) AP3S2 (ENSEASG00005006473) ##22 ENSEASG00005034086 ENSEASG00005038359 MESP2 (ENSEASG00005029954) ENSEASG00005015128 ENSEASG00005032063 ##22 MESP1 (ENSEASG00005026694) WDR93 (ENSEASG00005015162) PEX11A (ENSEASG00005029106) PLIN1 (ENSEASG00005036082) ENSEASG00005015200 ENSEASG00005015180 RHCG (ENSEASG00005015218) POLG (ENSEASG00005015232) FANCI (ENSEASG00005015261) RLBP1 (ENSEASG00005015350) Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Suina ANCESTRAL SPECIES 38 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000177011 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a Pig MODERN SPECIES 15 ENSSSCG00000045165 NRG4 (ENSSSCG00000052301) FBXO22 (ENSSSCG00000061790) UBE2Q2 (ENSSSCG00000027457) PRC1 (ENSSSCG00000037307) VPS33B (ENSSSCG00000033954) NGRN (ENSSSCG00000055255) TTLL13 (ENSSSCG00000031810) GDPGP1 (ENSSSCG00000059314) CIB1 (ENSSSCG00000001858) SEMA4B (ENSSSCG00000031719) ENSSSCG00000062022 IDH2 (ENSSSCG00000001852) ZNF710 (ENSSSCG00000021361) ARPIN (ENSSSCG00000001850) AP3S2 (ENSSSCG00000030174) ##22 ANPEP (ENSSSCG00000001849) MESP2 (ENSSSCG00000001848) MESP1 (ENSSSCG00000001847) WDR93 (ENSSSCG00000001846) PEX11A (ENSSSCG00000027052) PLIN1 (ENSSSCG00000001844) ENSSSCG00000036100 KIF7 (ENSSSCG00000001840) TICRR (ENSSSCG00000040355) RHCG (ENSSSCG00000001841) POLG (ENSSSCG00000001838) FANCI (ENSSSCG00000001837) RLBP1 (ENSSSCG00000001836) ABHD2 (ENSSSCG00000001835) MFGE8 (ENSSSCG00000001834) Chacoan peccary MODERN SPECIES 883 FES (ENSCWAG00000011529) MAN2A2 (ENSCWAG00000011390) HDDC3 (ENSCWAG00000011331) UNC45A (ENSCWAG00000015870) RCCD1 (ENSCWAG00000015785) PRC1 (ENSCWAG00000015693) VPS33B (ENSCWAG00000015476) NGRN (ENSCWAG00000015432) TTLL13 (ENSCWAG00000015219) GDPGP1 (ENSCWAG00000015206) CIB1 (ENSCWAG00000015168) SEMA4B (ENSCWAG00000015050) IDH2 (ENSCWAG00000014959) ZNF710 (ENSCWAG00000014904) ARPIN (ENSCWAG00000014874) AP3S2 (ENSCWAG00000014827) ##22 ANPEP (ENSCWAG00000014682) MESP2 (ENSCWAG00000014648) MESP1 (ENSCWAG00000014611) WDR93 (ENSCWAG00000014320) PEX11A (ENSCWAG00000014218) PLIN1 (ENSCWAG00000014150) ENSCWAG00000014134 KIF7 (ENSCWAG00000014053) TICRR (ENSCWAG00000013661) RHCG (ENSCWAG00000013562) POLG (ENSCWAG00000013365) FANCI (ENSCWAG00000013101) Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Camelidae ANCESTRAL SPECIES 21 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 Arabian camel MODERN SPECIES 19 FES (ENSCDRG00005011337) MAN2A2 (ENSCDRG00005011066) HDDC3 (ENSCDRG00005010922) UNC45A (ENSCDRG00005010468) RCCD1 (ENSCDRG00005010378) PRC1 (ENSCDRG00005010116) VPS33B (ENSCDRG00005009843) NGRN (ENSCDRG00005009773) TTLL13 (ENSCDRG00005009637) GDPGP1 (ENSCDRG00005009615) CIB1 (ENSCDRG00005009559) SEMA4B (ENSCDRG00005009192) IDH2 (ENSCDRG00005008978) ZNF710 (ENSCDRG00005008912) ARPIN (ENSCDRG00005020781) AP3S2 (ENSCDRG00005020771) ##22 ANPEP (ENSCDRG00005020759) MESP2 (ENSCDRG00005020753) MESP1 (ENSCDRG00005020745) WDR93 (ENSCDRG00005020735) PEX11A (ENSCDRG00005020721) PLIN1 (ENSCDRG00005020709) KIF7 (ENSCDRG00005020696) TICRR (ENSCDRG00005020652) RHCG (ENSCDRG00005020632) POLG (ENSCDRG00005020609) FANCI (ENSCDRG00005020577) RLBP1 (ENSCDRG00005020563) ABHD2 (ENSCDRG00005020558) MFGE8 (ENSCDRG00005020507) HAPLN3 (ENSCDRG00005020489) Alpaca MODERN SPECIES 5693 AP3S2 (ENSVPAG00000008668) ##22 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Pecora ANCESTRAL SPECIES 18 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Percora_a ANCESTRAL SPECIES 20 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Bovidae ANCESTRAL SPECIES 20 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Bovinae ANCESTRAL SPECIES 19 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 American bison MODERN SPECIES 3078 FES (ENSBBBG00000006199) MAN2A2 (ENSBBBG00000023851) HDDC3 (ENSBBBG00000000302) UNC45A (ENSBBBG00000024013) PRC1 (ENSBBBG00000000288) VPS33B (ENSBBBG00000024264) NGRN (ENSBBBG00000024280) ENSBBBG00000006328 GDPGP1 (ENSBBBG00000024284) CIB1 (ENSBBBG00000024306) SEMA4B (ENSBBBG00000024361) ENSBBBG00000024369 IDH2 (ENSBBBG00000024391) ZNF710 (ENSBBBG00000024401) ARPIN (ENSBBBG00000024421) AP3S2 (ENSBBBG00000024465) ##22 ANPEP (ENSBBBG00000024511) WDR93 (ENSBBBG00000024558) PEX11A (ENSBBBG00000008039) PLIN1 (ENSBBBG00000000257) KIF7 (ENSBBBG00000000187) RHCG (ENSBBBG00000006485) POLG (ENSBBBG00000008229) FANCI (ENSBBBG00000006654) RLBP1 (ENSBBBG00000025152) ABHD2 (ENSBBBG00000025173) MFGE8 (ENSBBBG00000025271) HAPLN3 (ENSBBBG00000008259) ENSBBBG00000025298 ENSBBBG00000025336 ENSBBBG00000025362 Bos ANCESTRAL SPECIES 18 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a.d ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Bos_a ANCESTRAL SPECIES 10 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a.d ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Wild yak MODERN SPECIES 704 FES (ENSBMUG00000007557) MAN2A2 (ENSBMUG00000007488) HDDC3 (ENSBMUG00000007452) UNC45A (ENSBMUG00000007402) PRC1 (ENSBMUG00000007306) VPS33B (ENSBMUG00000007246) NGRN (ENSBMUG00000007214) GDPGP1 (ENSBMUG00000007210) CIB1 (ENSBMUG00000007196) SEMA4B (ENSBMUG00000007182) ENSBMUG00000007168 IDH2 (ENSBMUG00000007161) ZNF710 (ENSBMUG00000007149) ARPIN (ENSBMUG00000007142) AP3S2 (ENSBMUG00000007130) ##22 ANPEP (ENSBMUG00000007105) MESP1 (ENSBMUG00000007083) WDR93 (ENSBMUG00000007071) PEX11A (ENSBMUG00000007058) PLIN1 (ENSBMUG00000007031) ENSBMUG00000007018 KIF7 (ENSBMUG00000006610) TICRR (ENSBMUG00000006427) RHCG (ENSBMUG00000006381) Domestic yak MODERN SPECIES 8 FES (ENSBGRG00000008515) MAN2A2 (ENSBGRG00000008221) HDDC3 (ENSBGRG00000008060) UNC45A (ENSBGRG00000007354) RCCD1 (ENSBGRG00000007228) PRC1 (ENSBGRG00000007005) VPS33B (ENSBGRG00000006687) NGRN (ENSBGRG00000006616) GDPGP1 (ENSBGRG00000006601) CIB1 (ENSBGRG00000006551) SEMA4B (ENSBGRG00000006522) ENSBGRG00000006505 IDH2 (ENSBGRG00000006356) ZNF710 (ENSBGRG00000006289) ARPIN (ENSBGRG00000006258) AP3S2 (ENSBGRG00000006157) ##22 ANPEP (ENSBGRG00000006001) MESP2 (ENSBGRG00000005954) MESP1 (ENSBGRG00000005945) WDR93 (ENSBGRG00000005759) ENSBGRG00000005653 PLIN1 (ENSBGRG00000005613) ENSBGRG00000005593 KIF7 (ENSBGRG00000005580) TICRR (ENSBGRG00000005251) RHCG (ENSBGRG00000005133) POLG (ENSBGRG00000004700) FANCI (ENSBGRG00000004285) RLBP1 (ENSBGRG00000004191) ABHD2 (ENSBGRG00000004063) ENSBGRG00000003870 Bos_b ANCESTRAL SPECIES 18 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000174015.a ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a.d ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Cow MODERN SPECIES 13 MAN2A2 (ENSBTAG00000018905) HDDC3 (ENSBTAG00000018637) UNC45A (ENSBTAG00000018639) RCCD1 (ENSBTAG00000018642) PRC1 (ENSBTAG00000018643) VPS33B (ENSBTAG00000000026) NGRN (ENSBTAG00000014505) ENSBTAG00000052625 GDPGP1 (ENSBTAG00000005174) CIB1 (ENSBTAG00000021275) SEMA4B (ENSBTAG00000021273) ENSBTAG00000022947 IDH2 (ENSBTAG00000014093) ZNF710 (ENSBTAG00000019174) ARPIN (ENSBTAG00000027059) AP3S2 (ENSBTAG00000001407) ##22 ANPEP (ENSBTAG00000016881) MESP2 (ENSBTAG00000027058) MESP1 (ENSBTAG00000052215) ENSBTAG00000055143 WDR93 (ENSBTAG00000006141) PEX11A (ENSBTAG00000006140) PLIN1 (ENSBTAG00000015350) ENSBTAG00000050851 KIF7 (ENSBTAG00000002440) TICRR (ENSBTAG00000002418) RHCG (ENSBTAG00000005471) POLG (ENSBTAG00000009098) FANCI (ENSBTAG00000009097) RLBP1 (ENSBTAG00000033721) ABHD2 (ENSBTAG00000019954) Hybrid Bos Indicus MODERN SPECIES 13 FES (ENSBIXG00005000057) MAN2A2 (ENSBIXG00005019060) HDDC3 (ENSBIXG00005019122) PRC1 (ENSBIXG00005019198) UNC45A (ENSBIXG00005003160) VPS33B (ENSBIXG00005019505) NGRN (ENSBIXG00005019528) ENSBIXG00005003184 GDPGP1 (ENSBIXG00005019557) CIB1 (ENSBIXG00005019579) SEMA4B (ENSBIXG00005019636) ENSBIXG00005019653 IDH2 (ENSBIXG00005003221) ZNF710 (ENSBIXG00005019736) ARPIN (ENSBIXG00005006453) AP3S2 (ENSBIXG00005019853) ##22 ANPEP (ENSBIXG00005006254) MESP2 (ENSBIXG00005019976) MESP1 (ENSBIXG00005019991) WDR93 (ENSBIXG00005020035) PEX11A (ENSBIXG00005020081) PLIN1 (ENSBIXG00005003299) ENSBIXG00005020106 KIF7 (ENSBIXG00005003323) TICRR (ENSBIXG00005007151) RHCG (ENSBIXG00005020212) POLG (ENSBIXG00005007341) FANCI (ENSBIXG00005020571) RLBP1 (ENSBIXG00005020625) ABHD2 (ENSBIXG00005020711) ENSBIXG00005020836 Caprinae ANCESTRAL SPECIES 22 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149.c ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012138.a.a.j ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Goat MODERN SPECIES 13 HDDC3 (ENSCHIG00000016009) UNC45A (ENSCHIG00000021276) RCCD1 (ENSCHIG00000017401) PRC1 (ENSCHIG00000002572) VPS33B (ENSCHIG00000013457) NGRN (ENSCHIG00000005996) GDPGP1 (ENSCHIG00000009003) CIB1 (ENSCHIG00000010453) SEMA4B (ENSCHIG00000021814) ENSCHIG00000008060 IDH2 (ENSCHIG00000003808) ZNF710 (ENSCHIG00000013294) ENSCHIG00000008026 ENSCHIG00000026031 ARPIN (ENSCHIG00000012381) AP3S2 (ENSCHIG00000009606) ##22 ANPEP (ENSCHIG00000010000) MESP2 (ENSCHIG00000018743) MESP1 (ENSCHIG00000008103) WDR93 (ENSCHIG00000019646) PEX11A (ENSCHIG00000022361) PLIN1 (ENSCHIG00000024060) ENSCHIG00000010195 KIF7 (ENSCHIG00000007739) TICRR (ENSCHIG00000008062) RHCG (ENSCHIG00000016640) POLG (ENSCHIG00000010897) FANCI (ENSCHIG00000001826) RLBP1 (ENSCHIG00000017537) ABHD2 (ENSCHIG00000022476) MFGE8 (ENSCHIG00000013575) Rambouillet Sheep MODERN SPECIES 9 FURIN (ENSOARG00020017222) FES (ENSOARG00020016619) MAN2A2 (ENSOARG00020016456) HDDC3 (ENSOARG00020016307) UNC45A (ENSOARG00020015762) ENSOARG00020015471 PRC1 (ENSOARG00020014648) ENSOARG00020014295 ENSOARG00020014240 GDPGP1 (ENSOARG00020014196) CIB1 (ENSOARG00020014063) SEMA4B (ENSOARG00020013998) IDH2 (ENSOARG00020013874) ZNF710 (ENSOARG00020013794) ARPIN (ENSOARG00020013709) AP3S2 (ENSOARG00020013660) ##22 ANPEP (ENSOARG00020013355) MESP2 (ENSOARG00020013309) MESP1 (ENSOARG00020013250) PEX11A (ENSOARG00020012821) PLIN1 (ENSOARG00020012577) ENSOARG00020012547 KIF7 (ENSOARG00020012423) TICRR (ENSOARG00020011429) RHCG (ENSOARG00020011115) POLG (ENSOARG00020010916) FANCI (ENSOARG00020010384) RLBP1 (ENSOARG00020010241) ABHD2 (ENSOARG00020010065) ENSOARG00020009476 ACAN (ENSOARG00020009421) Yarkand deer MODERN SPECIES 4 PRC1 (ENSCHYG00000016077) VPS33B (ENSCHYG00000015548) NGRN (ENSCHYG00000015459) ENSCHYG00000015418 ENSCHYG00000015395 GDPGP1 (ENSCHYG00000015375) ENSCHYG00000015192 SEMA4B (ENSCHYG00000014955) ENSCHYG00000014920 ENSCHYG00000014877 ENSCHYG00000014856 ENSCHYG00000014776 IDH2 (ENSCHYG00000014515) ZNF710 (ENSCHYG00000014424) ARPIN (ENSCHYG00000014270) AP3S2 (ENSCHYG00000014177) ##22 ANPEP (ENSCHYG00000013903) MESP2 (ENSCHYG00000013783) MESP1 (ENSCHYG00000013751) WDR93 (ENSCHYG00000013441) PEX11A (ENSCHYG00000013352) PLIN1 (ENSCHYG00000013247) ENSCHYG00000013197 KIF7 (ENSCHYG00000012986) TICRR (ENSCHYG00000012892) RHCG (ENSCHYG00000012754) POLG (ENSCHYG00000012478) FANCI (ENSCHYG00000011622) RLBP1 (ENSCHYG00000011493) ABHD2 (ENSCHYG00000011415) ENSCHYG00000011393 Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES ENSGT00970000193421.C.b.c ##22 Odontoceti ANCESTRAL SPECIES ENSGT00970000193421.C.b.c ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00970000193421.C.b.c ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00970000193421.C.b.c ##22 Monodontidae ANCESTRAL SPECIES ENSGT00970000193421.C.b.c ##22 Narwhal MODERN SPECIES 298 APC (ENSMMNG00015000786) EPB41L4A (ENSMMNG00015000835) ENSMMNG00015000938 NREP (ENSMMNG00015000968) YTHDC2 (ENSMMNG00015001016) KCNN2 (ENSMMNG00015001094) TRIM36 (ENSMMNG00015001167) PGGT1B (ENSMMNG00015001222) CCDC112 (ENSMMNG00015001265) ENSMMNG00015001311 FEM1C (ENSMMNG00015001324) TICAM2 (ENSMMNG00015001343) TMED7 (ENSMMNG00015001349) CDO1 (ENSMMNG00015001380) ENSMMNG00015001406 ENSMMNG00015001440 ##22 ENSMMNG00015001484 LVRN (ENSMMNG00015001523) ARL14EPL (ENSMMNG00015001598) ENSMMNG00015001625 SEMA6A (ENSMMNG00015001672) DTWD2 (ENSMMNG00015001715) DMXL1 (ENSMMNG00015001784) TNFAIP8 (ENSMMNG00015001932) HSD17B4 (ENSMMNG00015001986) FAM170A (ENSMMNG00015002066) ENSMMNG00015002089 ENSMMNG00015002101 PRR16 (ENSMMNG00015002119) ENSMMNG00015002139 FTMT (ENSMMNG00015002152) Cetacea DUPLICATION Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES ENSGT00970000193421.C.b.d.a.a ##22 Blue whale MODERN SPECIES 1 GNPTAB (ENSBMSG00010006890) SYCP3 (ENSBMSG00010006857) CHPT1 (ENSBMSG00010006840) MYBPC1 (ENSBMSG00010006609) ENSBMSG00010006520 ENSBMSG00010006485 UTP20 (ENSBMSG00010006434) SLC5A8 (ENSBMSG00010006402) ANO4 (ENSBMSG00010006300) GAS2L3 (ENSBMSG00010006259) NR1H4 (ENSBMSG00010006205) SLC17A8 (ENSBMSG00010006142) SCYL2 (ENSBMSG00010006075) ACTR6 (ENSBMSG00010006031) BLTP3B (ENSBMSG00010006007) ENSBMSG00010010902 ##22 ANKS1B (ENSBMSG00010010048) APAF1 (ENSBMSG00010009889) IKBIP (ENSBMSG00010009856) ENSBMSG00010009830 ENSBMSG00010009790 ENSBMSG00010009758 NEDD1 (ENSBMSG00010009710) ENSBMSG00010009687 CDK17 (ENSBMSG00010009667) ELK3 (ENSBMSG00010009646) LTA4H (ENSBMSG00010009606) HAL (ENSBMSG00010009502) AMDHD1 (ENSBMSG00010009480) CCDC38 (ENSBMSG00010009469) SNRPF (ENSBMSG00010009458) Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES 11 ENSGT00940000162884 ENSGT00940000163662 ENSGT00940000157456 ENSGT00940000157949 ENSGT00960000191194 ENSGT00940000156247 ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000155541.C.eb.b ENSGT00940000160197 ENSGT00990000211064 ENSGT00860000135660 ENSGT00940000157221 ENSGT00970000193421.C.b.d.a.a.a ##22 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.z ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 Sperm whale MODERN SPECIES 18 KLF3 (ENSPCTG00005017490) TBC1D1 (ENSPCTG00005017560) PGM2 (ENSPCTG00005017784) RELL1 (ENSPCTG00005017831) C7H4orf19 (ENSPCTG00005017891) NWD2 (ENSPCTG00005017924) ENSPCTG00005018016 ENSPCTG00005018031 ENSPCTG00005018056 DTHD1 (ENSPCTG00005018074) ENSPCTG00005018478 ENSPCTG00005008684 ENSPCTG00005008723 ENSPCTG00005008758 PCDH7 (ENSPCTG00005008773) ENSPCTG00005008787 ##22 ENSPCTG00005008821 STIM2 (ENSPCTG00005008859) ENSPCTG00005009237 TBC1D19 (ENSPCTG00005009308) CCKAR (ENSPCTG00005009612) ENSPCTG00005009702 ENSPCTG00005010143 SEL1L3 (ENSPCTG00005010228) ENSPCTG00005010721 ANAPC4 (ENSPCTG00005010830) ZCCHC4 (ENSPCTG00005010952) PI4K2B (ENSPCTG00005011034) SEPSECS (ENSPCTG00005011169) LGI2 (ENSPCTG00005011194) CCDC149 (ENSPCTG00005011289) Odontoceti_a ANCESTRAL SPECIES 23 ENSGT00940000162884 ENSGT00940000163662 ENSGT00940000157456 ENSGT00940000157949 ENSGT00960000191194 ENSGT00940000156247 ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000155541.C.eb.b ENSGT00940000160197 ENSGT00990000211064 ENSGT00860000135660 ENSGT00940000157221 ENSGT00970000193421.C.b.d.a.a.a ##22 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00940000157456 ENSGT00940000157949 ENSGT00960000191194 ENSGT00940000156247 ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00390000018316.b.b.g.b ENSGT00940000153404.b ENSGT00940000155541.C.eb.b ENSGT00940000160197 ENSGT00940000160787.b ENSGT00990000211064 ENSGT00860000135660 ENSGT00940000157221 ENSGT00970000193421.C.b.d.a.a.a ##22 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.z ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000005197.a.y.a ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 Vaquita MODERN SPECIES 16 TBC1D1 (ENSPSNG00000000856) PGM2 (ENSPSNG00000000735) RELL1 (ENSPSNG00000000700) C4orf19 (ENSPSNG00000000685) ENSPSNG00000000670 NWD2 (ENSPSNG00000000639) ENSPSNG00000000612 ARAP2 (ENSPSNG00000000450) ENSPSNG00000000307 ENSPSNG00000000293 ENSPSNG00000000272 ENSPSNG00000000255 ENSPSNG00000000226 ENSPSNG00000000209 PCDH7 (ENSPSNG00000000169) ENSPSNG00000000096 ##22 ENSPSNG00000021862 STIM2 (ENSPSNG00000021816) ENSPSNG00000021771 TBC1D19 (ENSPSNG00000021702) CCKAR (ENSPSNG00000021657) ENSPSNG00000021513 SMIM20 (ENSPSNG00000021406) SEL1L3 (ENSPSNG00000021270) SLC34A2 (ENSPSNG00000021188) ENSPSNG00000021159 ANAPC4 (ENSPSNG00000021117) ZCCHC4 (ENSPSNG00000021077) PI4K2B (ENSPSNG00000021008) SEPSECS (ENSPSNG00000020956) LGI2 (ENSPSNG00000020909) Odontoceti ANCESTRAL SPECIES ENSGT00970000193421.C.b.d.a.a.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00970000193421.C.b.d.a.a.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00970000193421.C.b.d.a.a.b ##22 Monodontidae ANCESTRAL SPECIES ENSGT00970000193421.C.b.d.a.a.b ##22 Narwhal MODERN SPECIES 313 CHPT1 (ENSMMNG00015015187) MYBPC1 (ENSMMNG00015014938) SPIC (ENSMMNG00015014772) ENSMMNG00015014764 UTP20 (ENSMMNG00015014730) SLC5A8 (ENSMMNG00015014687) ANO4 (ENSMMNG00015014593) GAS2L3 (ENSMMNG00015014544) NR1H4 (ENSMMNG00015014507) SLC17A8 (ENSMMNG00015014449) SCYL2 (ENSMMNG00015014414) ACTR6 (ENSMMNG00015014364) BLTP3B (ENSMMNG00015014349) ENSMMNG00015014334 GARIN6 (ENSMMNG00015014319) ENSMMNG00015014315 ##22 ANKS1B (ENSMMNG00015014074) APAF1 (ENSMMNG00015013879) IKBIP (ENSMMNG00015013856) SLC25A3 (ENSMMNG00015013779) ENSMMNG00015013740 NEDD1 (ENSMMNG00015013645) CFAP54 (ENSMMNG00015013547) CDK17 (ENSMMNG00015013496) ELK3 (ENSMMNG00015013477) LTA4H (ENSMMNG00015013417) HAL (ENSMMNG00015013379) AMDHD1 (ENSMMNG00015013360) CCDC38 (ENSMMNG00015013349) SNRPF (ENSMMNG00015013338) NTN4 (ENSMMNG00015013318) Beluga whale MODERN SPECIES 45 MYBPC1 (ENSDLEG00000012290) SPIC (ENSDLEG00000012245) ENSDLEG00000012234 UTP20 (ENSDLEG00000012184) SLC5A8 (ENSDLEG00000012140) ANO4 (ENSDLEG00000012044) GAS2L3 (ENSDLEG00000012028) NR1H4 (ENSDLEG00000011975) SLC17A8 (ENSDLEG00000011936) SCYL2 (ENSDLEG00000011872) ACTR6 (ENSDLEG00000011851) BLTP3B (ENSDLEG00000011825) ENSDLEG00000011815 GARIN6 (ENSDLEG00000011803) ENSDLEG00000011790 ENSDLEG00000011784 ##22 ENSDLEG00000011773 ENSDLEG00000011766 APAF1 (ENSDLEG00000011640) IKBIP (ENSDLEG00000011613) SLC25A3 (ENSDLEG00000011582) TMPO (ENSDLEG00000011539) NEDD1 (ENSDLEG00000011471) CFAP54 (ENSDLEG00000011364) CDK17 (ENSDLEG00000011309) ELK3 (ENSDLEG00000011295) LTA4H (ENSDLEG00000011258) ENSDLEG00000011246 ENSDLEG00000011227 AMDHD1 (ENSDLEG00000011198) CCDC38 (ENSDLEG00000011130) Vaquita MODERN SPECIES 1 SPIC (ENSPSNG00000007910) ARL1 (ENSPSNG00000008015) UTP20 (ENSPSNG00000008109) SLC5A8 (ENSPSNG00000008157) ANO4 (ENSPSNG00000008341) GAS2L3 (ENSPSNG00000008665) NR1H4 (ENSPSNG00000008748) SLC17A8 (ENSPSNG00000008979) SCYL2 (ENSPSNG00000009144) ACTR6 (ENSPSNG00000009262) BLTP3B (ENSPSNG00000009410) ANKS1B (ENSPSNG00000009944) ENSPSNG00000011090 GARIN6 (ENSPSNG00000011143) ENSPSNG00000011179 ENSPSNG00000011235 ##22 APAF1 (ENSPSNG00000011279) IKBIP (ENSPSNG00000011556) SLC25A3 (ENSPSNG00000011667) ENSPSNG00000011873 NEDD1 (ENSPSNG00000012119) ENSPSNG00000012324 CDK17 (ENSPSNG00000012485) ELK3 (ENSPSNG00000012591) LTA4H (ENSPSNG00000012687) ENSPSNG00000012774 ENSPSNG00000012842 AMDHD1 (ENSPSNG00000013010) SNRPF (ENSPSNG00000013139) NTN4 (ENSPSNG00000013221) USP44 (ENSPSNG00000013323) Cetacea ANCESTRAL SPECIES 17 ENSGT00390000014100 ENSGT00940000153141.B.b ENSGT00940000162962 ENSGT00910000147681 ENSGT00940000158777 ENSGT00940000159203 ENSGT00490000043388.b.a ENSGT00940000161484 ENSGT00940000166547 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000153649.A ENSGT00960000189175 ENSGT00940000153886.a.b ENSGT00940000158863 ENSGT00970000193421.C.b.d.a.b ##22 ENSGT00940000159497 ENSGT00940000155059 ENSGT00940000154502 ENSGT00940000153141.B.a ENSGT00520000055567.a.a.b ENSGT00950000183056.B.b ENSGT00840000130804 ENSGT00940000160216 ENSGT00390000009517.n ENSGT00950000183149.A ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b Odontoceti ANCESTRAL SPECIES 20 ENSGT00940000162962 ENSGT00910000147681 ENSGT00940000158777 ENSGT00940000159203 ENSGT00490000043388.b.a ENSGT00940000161484 ENSGT00940000166547 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000154706.gb ENSGT00940000153649.A ENSGT00940000153886.a.b.p ENSGT00960000189175 ENSGT00940000153886.a.b.o.a ENSGT00940000158863 ENSGT00970000193421.C.b.d.a.b ##22 ENSGT00940000159497 ENSGT00940000155059 ENSGT00940000154502 ENSGT00940000153141.B.a ENSGT00520000055567.a.a.b ENSGT00950000183056.B.b ENSGT00840000130804 ENSGT00940000160216 ENSGT00390000009517.n ENSGT00950000183149.A ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00940000162962 ENSGT00910000147681 ENSGT00940000158777 ENSGT00940000159203 ENSGT00490000043388.b.a ENSGT00940000161484 ENSGT00940000166547 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000154706.gb ENSGT00940000153649.A ENSGT00940000153886.a.b.p ENSGT00960000189175 ENSGT00940000153886.a.b.o.a ENSGT00940000158863 ENSGT00970000193421.C.b.d.a.b ##22 ENSGT00940000159497 ENSGT00940000155059 ENSGT00940000154502 ENSGT00940000153141.B.a ENSGT00520000055567.a.a.b ENSGT00950000183056.B.b ENSGT00840000130804 ENSGT00940000160216 ENSGT00950000183149.A ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b ENSGT00940000158011 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00940000162962 ENSGT00910000147681 ENSGT00940000158777 ENSGT00940000159203 ENSGT00490000043388.b.a ENSGT00940000161484 ENSGT00940000166547 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000154706.gb ENSGT00940000153649.A ENSGT00940000153886.a.b.p ENSGT00960000189175 ENSGT00940000153886.a.b.o.a ENSGT00940000158863 ENSGT00970000193421.C.b.d.a.b ##22 ENSGT00940000159497 ENSGT00940000155059 ENSGT00940000154502.q.a ENSGT00940000153141.B.a ENSGT00520000055567.a.a.b ENSGT00950000183056.B.b ENSGT00840000130804 ENSGT00940000160216 ENSGT00950000183149.A ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b ENSGT00940000158011 Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000162962 ENSGT00910000147681 ENSGT00940000162252.a.b.a ENSGT00940000158777 ENSGT00940000159203 ENSGT00490000043388.b.a ENSGT00940000161484 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000154706.gb ENSGT00940000153649.A ENSGT00940000153886.a.b.p ENSGT00960000189175 ENSGT00940000153886.a.b.o.a ENSGT00940000158863 ENSGT00970000193421.C.b.d.a.b ##22 ENSGT00940000159497 ENSGT00940000155059 ENSGT00940000154502.q.a ENSGT00940000153141.B.a ENSGT00520000055567.a.a.b ENSGT00950000183056.B.b ENSGT00840000130804 ENSGT00940000160216 ENSGT00950000183149.A ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b ENSGT00940000158011 Narwhal MODERN SPECIES 300 CYP7B1 (ENSMMNG00015014371) BHLHE22 (ENSMMNG00015014386) ENSMMNG00015014395 ENSMMNG00015014408 YTHDF3 (ENSMMNG00015014419) TTPA (ENSMMNG00015014455) GGH (ENSMMNG00015014466) NKAIN3 (ENSMMNG00015014482) ASPH (ENSMMNG00015014513) CLVS1 (ENSMMNG00015014569) ENSMMNG00015014583 ENSMMNG00015014606 ENSMMNG00015014634 RAB2A (ENSMMNG00015014666) CA8 (ENSMMNG00015014739) ENSMMNG00015014768 ##22 TOX (ENSMMNG00015014789) NSMAF (ENSMMNG00015014823) ENSMMNG00015014889 CYP7A1 (ENSMMNG00015014931) UBXN2B (ENSMMNG00015014945) FAM110B (ENSMMNG00015014967) ENSMMNG00015014975 BPNT2 (ENSMMNG00015014985) PENK (ENSMMNG00015014998) SDR16C5 (ENSMMNG00015015011) CHCHD7 (ENSMMNG00015015047) PLAG1 (ENSMMNG00015015090) MOS (ENSMMNG00015015102) RPS20 (ENSMMNG00015015116) LYN (ENSMMNG00015015150) Beluga whale MODERN SPECIES 47 ENSDLEG00000013748 BHLHE22 (ENSDLEG00000013759) ENSDLEG00000013768 ENSDLEG00000013782 ENSDLEG00000013798 ENSDLEG00000013804 YTHDF3 (ENSDLEG00000013813) TTPA (ENSDLEG00000013829) GGH (ENSDLEG00000013842) NKAIN3 (ENSDLEG00000013867) ASPH (ENSDLEG00000013927) CLVS1 (ENSDLEG00000014225) CHD7 (ENSDLEG00000014252) ENSDLEG00000014356 CA8 (ENSDLEG00000014524) ENSDLEG00000014564 ##22 TOX (ENSDLEG00000014593) NSMAF (ENSDLEG00000014647) SDCBP (ENSDLEG00000014840) CYP7A1 (ENSDLEG00000014869) UBXN2B (ENSDLEG00000014883) FAM110B (ENSDLEG00000014904) ENSDLEG00000014911 IMPAD1 (ENSDLEG00000014922) PENK (ENSDLEG00000014942) SDR16C5 (ENSDLEG00000014953) CHCHD7 (ENSDLEG00000014964) PLAG1 (ENSDLEG00000014990) MOS (ENSDLEG00000014999) RPS20 (ENSDLEG00000015007) LYN (ENSDLEG00000015026) Vaquita MODERN SPECIES 8 CYP7B1 (ENSPSNG00000015921) BHLHE22 (ENSPSNG00000015901) ENSPSNG00000015879 YTHDF3 (ENSPSNG00000015736) TTPA (ENSPSNG00000015656) GGH (ENSPSNG00000015614) NKAIN3 (ENSPSNG00000015534) ENSPSNG00000015230 ASPH (ENSPSNG00000015174) CLVS1 (ENSPSNG00000015072) ENSPSNG00000014838 ENSPSNG00000014695 ENSPSNG00000014444 ENSPSNG00000014232 CA8 (ENSPSNG00000014024) ENSPSNG00000013920 ##22 ENSPSNG00000013856 TOX (ENSPSNG00000013722) NSMAF (ENSPSNG00000013633) ENSPSNG00000013252 CYP7A1 (ENSPSNG00000013094) UBXN2B (ENSPSNG00000013041) FAM110B (ENSPSNG00000012940) ENSPSNG00000012901 BPNT2 (ENSPSNG00000012862) PENK (ENSPSNG00000012737) SDR16C5 (ENSPSNG00000012633) CHCHD7 (ENSPSNG00000012370) PLAG1 (ENSPSNG00000012314) MOS (ENSPSNG00000012282) ENSPSNG00000012196 Sperm whale MODERN SPECIES 6 BHLHE22 (ENSPCTG00005005190) ENSPCTG00005005204 ENSPCTG00005005232 ENSPCTG00005005287 YTHDF3 (ENSPCTG00005005326) TTPA (ENSPCTG00005005393) GGH (ENSPCTG00005005426) NKAIN3 (ENSPCTG00005005439) ASPH (ENSPCTG00005005499) CLVS1 (ENSPCTG00005005796) ENSPCTG00005005834 ENSPCTG00005005859 ENSPCTG00005005961 RAB2A (ENSPCTG00005006036) CA8 (ENSPCTG00005006125) ENSPCTG00005006157 ##22 TOX (ENSPCTG00005006198) NSMAF (ENSPCTG00005006244) SDCBP (ENSPCTG00005006360) CYP7A1 (ENSPCTG00005006470) UBXN2B (ENSPCTG00005006509) FAM110B (ENSPCTG00005006604) ENSPCTG00005006619 IMPAD1 (ENSPCTG00005006632) ENSPCTG00005006655 PENK (ENSPCTG00005006664) SDR16C5 (ENSPCTG00005006691) CHCHD7 (ENSPCTG00005006756) PLAG1 (ENSPCTG00005006882) MOS (ENSPCTG00005006904) RPS20 (ENSPCTG00005006918) Blue whale MODERN SPECIES 8 CYP7B1 (ENSBMSG00010021049) BHLHE22 (ENSBMSG00010021064) ENSBMSG00010021073 YTHDF3 (ENSBMSG00010021100) TTPA (ENSBMSG00010021140) ENSBMSG00010021157 NKAIN3 (ENSBMSG00010021175) ENSBMSG00010021190 ENSBMSG00010021226 ENSBMSG00010021235 ENSBMSG00010021251 ENSBMSG00010021273 ENSBMSG00010021303 CA8 (ENSBMSG00010021321) ENSBMSG00010021332 ENSBMSG00010021342 ##22 TOX (ENSBMSG00010014010) ENSBMSG00010014092 NSMAF (ENSBMSG00010014175) SDCBP (ENSBMSG00010014364) CYP7A1 (ENSBMSG00010014601) UBXN2B (ENSBMSG00010014672) FAM110B (ENSBMSG00010014783) ENSBMSG00010014803 BPNT2 (ENSBMSG00010014836) ENSBMSG00010014887 PENK (ENSBMSG00010014925) SDR16C5 (ENSBMSG00010014961) CHCHD7 (ENSBMSG00010015042) PLAG1 (ENSBMSG00010015113) MOS (ENSBMSG00010015136) Cetacea ANCESTRAL SPECIES 2 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00530000066485.j.b ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.d.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000155811.m.b ENSGT00940000160026 ENSGT00950000182902.b.a Odontoceti ANCESTRAL SPECIES 2 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00530000066485.j.b ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.d.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00940000153434.a.b.a.a.a.a.b ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000155811.m.b ENSGT00940000160026 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.d.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00940000153434.a.b.a.a.a.a.b ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000155811.m.b ENSGT00940000160026 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.d.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00940000153434.a.b.a.a.a.a.b ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000155811.m.b ENSGT00940000160026 Monodontidae ANCESTRAL SPECIES 22 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.d.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00940000153434.a.b.a.a.a.a.b ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a Narwhal MODERN SPECIES 308 FES (ENSMMNG00015007431) MAN2A2 (ENSMMNG00015007612) HDDC3 (ENSMMNG00015007653) UNC45A (ENSMMNG00015007722) RCCD1 (ENSMMNG00015007808) PRC1 (ENSMMNG00015007842) VPS33B (ENSMMNG00015007880) NGRN (ENSMMNG00015007944) ENSMMNG00015007963 GDPGP1 (ENSMMNG00015007983) CIB1 (ENSMMNG00015007994) SEMA4B (ENSMMNG00015008019) IDH2 (ENSMMNG00015008143) ZNF710 (ENSMMNG00015008197) ARPIN (ENSMMNG00015008206) ENSMMNG00015008227 ##22 ANPEP (ENSMMNG00015008243) MESP2 (ENSMMNG00015008284) MESP1 (ENSMMNG00015008297) WDR93 (ENSMMNG00015008315) PEX11A (ENSMMNG00015008334) PLIN1 (ENSMMNG00015008345) KIF7 (ENSMMNG00015008356) ENSMMNG00015008367 TICRR (ENSMMNG00015008381) ENSMMNG00015008428 RHCG (ENSMMNG00015008451) POLG (ENSMMNG00015008482) FANCI (ENSMMNG00015008505) RLBP1 (ENSMMNG00015008565) ABHD2 (ENSMMNG00015008582) Beluga whale MODERN SPECIES 52 MAN2A2 (ENSDLEG00000007741) HDDC3 (ENSDLEG00000007755) UNC45A (ENSDLEG00000007759) RCCD1 (ENSDLEG00000007763) PRC1 (ENSDLEG00000007797) VPS33B (ENSDLEG00000008286) NGRN (ENSDLEG00000008384) ENSDLEG00000008406 GDPGP1 (ENSDLEG00000008426) ENSDLEG00000008437 CIB1 (ENSDLEG00000008468) SEMA4B (ENSDLEG00000008570) IDH2 (ENSDLEG00000008634) ZNF710 (ENSDLEG00000008714) ARPIN (ENSDLEG00000008735) ENSDLEG00000008780 ##22 ANPEP (ENSDLEG00000008944) MESP2 (ENSDLEG00000009025) MESP1 (ENSDLEG00000009048) ENSDLEG00000009078 ENSDLEG00000009103 PEX11A (ENSDLEG00000009119) PLIN1 (ENSDLEG00000009130) KIF7 (ENSDLEG00000009155) ENSDLEG00000009217 TICRR (ENSDLEG00000009242) ENSDLEG00000009444 RHCG (ENSDLEG00000009471) POLG (ENSDLEG00000009575) FANCI (ENSDLEG00000010533) RLBP1 (ENSDLEG00000010677) Vaquita MODERN SPECIES 11 FES (ENSPSNG00000001314) MAN2A2 (ENSPSNG00000001418) HDDC3 (ENSPSNG00000001455) UNC45A (ENSPSNG00000001490) RCCD1 (ENSPSNG00000001555) PRC1 (ENSPSNG00000001597) VPS33B (ENSPSNG00000001673) NGRN (ENSPSNG00000001785) ENSPSNG00000001800 GDPGP1 (ENSPSNG00000001828) CIB1 (ENSPSNG00000001844) SEMA4B (ENSPSNG00000001873) IDH2 (ENSPSNG00000001910) ZNF710 (ENSPSNG00000001925) ARPIN (ENSPSNG00000001950) ENSPSNG00000002002 ##22 ENSPSNG00000002023 ANPEP (ENSPSNG00000002313) MESP2 (ENSPSNG00000002834) MESP1 (ENSPSNG00000002843) WDR93 (ENSPSNG00000002868) PEX11A (ENSPSNG00000002902) PLIN1 (ENSPSNG00000002925) KIF7 (ENSPSNG00000002955) ENSPSNG00000002979 TICRR (ENSPSNG00000002997) ENSPSNG00000003026 RHCG (ENSPSNG00000003046) POLG (ENSPSNG00000003089) FANCI (ENSPSNG00000003139) ENSPSNG00000003166 Dolphin MODERN SPECIES 676 ARPIN (ENSTTRG00000015555) AP3S2 (ENSTTRG00000015554) ##22 ANPEP (ENSTTRG00000015546) MESP2 (ENSTTRG00000015545) ENSTTRG00000015540 WDR93 (ENSTTRG00000015534) PEX11A (ENSTTRG00000015532) PLIN1 (ENSTTRG00000015526) ENSTTRG00000015517 TICRR (ENSTTRG00000015481) Sperm whale MODERN SPECIES 2 ENSPCTG00005000875 MAN2A2 (ENSPCTG00005000898) HDDC3 (ENSPCTG00005000959) UNC45A (ENSPCTG00005001009) RCCD1 (ENSPCTG00005001102) PRC1 (ENSPCTG00005001166) VPS33B (ENSPCTG00005001247) ENSPCTG00005001331 GDPGP1 (ENSPCTG00005001340) CIB1 (ENSPCTG00005001355) SEMA4B (ENSPCTG00005001379) ENSPCTG00005001398 IDH2 (ENSPCTG00005001423) ZNF710 (ENSPCTG00005001455) ARPIN (ENSPCTG00005001476) ENSPCTG00005001491 ##22 ANPEP (ENSPCTG00005001635) MESP2 (ENSPCTG00005002047) MESP1 (ENSPCTG00005002059) WDR93 (ENSPCTG00005002071) PEX11A (ENSPCTG00005002095) PLIN1 (ENSPCTG00005002115) KIF7 (ENSPCTG00005002129) ENSPCTG00005002137 TICRR (ENSPCTG00005002165) ENSPCTG00005002271 RHCG (ENSPCTG00005002285) POLG (ENSPCTG00005002329) FANCI (ENSPCTG00005002443) RLBP1 (ENSPCTG00005002599) ABHD2 (ENSPCTG00005002623) Blue whale MODERN SPECIES 11 MAN2A2 (ENSBMSG00010002865) HDDC3 (ENSBMSG00010002908) UNC45A (ENSBMSG00010002958) RCCD1 (ENSBMSG00010003034) PRC1 (ENSBMSG00010003136) VPS33B (ENSBMSG00010003172) NGRN (ENSBMSG00010003219) TTLL13 (ENSBMSG00010003240) GDPGP1 (ENSBMSG00010003265) CIB1 (ENSBMSG00010003290) SEMA4B (ENSBMSG00010003333) ENSBMSG00010003363 IDH2 (ENSBMSG00010003394) ZNF710 (ENSBMSG00010003411) ARPIN (ENSBMSG00010003420) ENSBMSG00010003430 ##22 ANPEP (ENSBMSG00010003447) MESP2 (ENSBMSG00010003467) MESP1 (ENSBMSG00010003481) WDR93 (ENSBMSG00010003510) PLIN1 (ENSBMSG00010003533) ENSBMSG00010003544 KIF7 (ENSBMSG00010003572) ENSBMSG00010003599 TICRR (ENSBMSG00010003613) RHCG (ENSBMSG00010003646) POLG (ENSBMSG00010003677) FANCI (ENSBMSG00010003711) ENSBMSG00010003734 RLBP1 (ENSBMSG00010003747) ABHD2 (ENSBMSG00010003762) Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Glires ANCESTRAL SPECIES 15 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Lagomorpha ANCESTRAL SPECIES 74 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a Rabbit MODERN SPECIES 471 FURIN (ENSOCUG00000024969) FES (ENSOCUG00000002188) MAN2A2 (ENSOCUG00000013777) HDDC3 (ENSOCUG00000002200) RCCD1 (ENSOCUG00000026822) PRC1 (ENSOCUG00000028094) VPS33B (ENSOCUG00000005468) NGRN (ENSOCUG00000024766) TTLL13 (ENSOCUG00000014934) GDPGP1 (ENSOCUG00000014933) ENSOCUG00000014926 SEMA4B (ENSOCUG00000014916) IDH2 (ENSOCUG00000010508) ZNF710 (ENSOCUG00000015114) ARPIN (ENSOCUG00000027243) AP3S2 (ENSOCUG00000031018) ##22 ANPEP (ENSOCUG00000017659) ENSOCUG00000010997 RHCG (ENSOCUG00000017412) POLG (ENSOCUG00000031984) FANCI (ENSOCUG00000011488) RLBP1 (ENSOCUG00000013541) ABHD2 (ENSOCUG00000013527) Pika MODERN SPECIES 2493 AP3S2 (ENSOPRG00000019185) ##22 Rodentia ANCESTRAL SPECIES 3 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Rodentia_A ANCESTRAL SPECIES 2 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Hystricomorpha ANCESTRAL SPECIES 40 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 Hystricomorpha_a ANCESTRAL SPECIES 25 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Hystricomorpha_b ANCESTRAL SPECIES 20 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000155498 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Long-tailed chinchilla MODERN SPECIES 123 FES (ENSCLAG00000009402) ENSCLAG00000009690 HDDC3 (ENSCLAG00000012332) UNC45A (ENSCLAG00000010567) RCCD1 (ENSCLAG00000013802) PRC1 (ENSCLAG00000010099) VPS33B (ENSCLAG00000014674) NGRN (ENSCLAG00000011398) TTLL13 (ENSCLAG00000010727) GDPGP1 (ENSCLAG00000007785) CIB1 (ENSCLAG00000010000) SEMA4B (ENSCLAG00000008964) IDH2 (ENSCLAG00000014007) ENSCLAG00000008141 ARPIN (ENSCLAG00000008054) AP3S2 (ENSCLAG00000009062) ##22 ANPEP (ENSCLAG00000015432) ENSCLAG00000012204 WDR93 (ENSCLAG00000010252) PEX11A (ENSCLAG00000008620) PLIN1 (ENSCLAG00000012336) KIF7 (ENSCLAG00000013987) TICRR (ENSCLAG00000015621) RHCG (ENSCLAG00000011593) POLG (ENSCLAG00000009374) FANCI (ENSCLAG00000009777) ENSCLAG00000009718 RLBP1 (ENSCLAG00000010583) ABHD2 (ENSCLAG00000014471) MFGE8 (ENSCLAG00000009989) HAPLN3 (ENSCLAG00000010136) Degu MODERN SPECIES 43 HDDC3 (ENSODEG00000016159) UNC45A (ENSODEG00000016464) RCCD1 (ENSODEG00000015923) ENSODEG00000015035 VPS33B (ENSODEG00000015342) NGRN (ENSODEG00000015148) TTLL13 (ENSODEG00000015172) GDPGP1 (ENSODEG00000020367) CIB1 (ENSODEG00000015561) SEMA4B (ENSODEG00000015004) ENSODEG00000020320 ENSODEG00000015254 IDH2 (ENSODEG00000015691) ENSODEG00000015955 ARPIN (ENSODEG00000015330) AP3S2 (ENSODEG00000015043) ##22 ANPEP (ENSODEG00000016223) MESP2 (ENSODEG00000014775) WDR93 (ENSODEG00000015944) PEX11A (ENSODEG00000015268) PLIN1 (ENSODEG00000015512) KIF7 (ENSODEG00000015309) TICRR (ENSODEG00000015070) RHCG (ENSODEG00000015101) ENSODEG00000015778 ENSODEG00000015280 FANCI (ENSODEG00000016230) RLBP1 (ENSODEG00000014477) ABHD2 (ENSODEG00000015473) MFGE8 (ENSODEG00000014861) HAPLN3 (ENSODEG00000014578) Guinea pig MODERN SPECIES 10 ENSCPOG00000026159 MAN2A2 (ENSCPOG00000001765) HDDC3 (ENSCPOG00000001767) UNC45A (ENSCPOG00000001768) RCCD1 (ENSCPOG00000007603) PRC1 (ENSCPOG00000014754) VPS33B (ENSCPOG00000003707) NGRN (ENSCPOG00000039950) TTLL13 (ENSCPOG00000005211) GDPGP1 (ENSCPOG00000024009) CIB1 (ENSCPOG00000035061) SEMA4B (ENSCPOG00000009429) IDH2 (ENSCPOG00000008488) ZNF710 (ENSCPOG00000003532) ARPIN (ENSCPOG00000039273) AP3S2 (ENSCPOG00000020164) ##22 ANPEP (ENSCPOG00000002499) MESP2 (ENSCPOG00000019717) ENSCPOG00000031280 PEX11A (ENSCPOG00000032343) PLIN1 (ENSCPOG00000009674) KIF7 (ENSCPOG00000015371) RHCG (ENSCPOG00000009033) POLG (ENSCPOG00000007266) FANCI (ENSCPOG00000007259) RLBP1 (ENSCPOG00000009639) ABHD2 (ENSCPOG00000033305) MFGE8 (ENSCPOG00000003673) HAPLN3 (ENSCPOG00000037553) ACAN (ENSCPOG00000008837) ISG20 (ENSCPOG00000036489) Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000035520 ENSHGLG00000033320 ENSHGLG00000035080 HDDC3 (ENSHGLG00000012218) UNC45A (ENSHGLG00000011948) RCCD1 (ENSHGLG00000011725) PRC1 (ENSHGLG00000010926) ENSHGLG00000032807 ENSHGLG00000033327 CIB1 (ENSHGLG00000008756) SEMA4B (ENSHGLG00000008413) ENSHGLG00000000348 IDH2 (ENSHGLG00000008310) ENSHGLG00000049498 ARPIN (ENSHGLG00000038897) AP3S2 (ENSHGLG00000048118) ##22 ANPEP (ENSHGLG00000009602) ENSHGLG00000032990 KIF7 (ENSHGLG00000007549) ENSHGLG00000042458 TICRR (ENSHGLG00000007225) RHCG (ENSHGLG00000006901) ENSHGLG00000046781 ENSHGLG00000037675 RLBP1 (ENSHGLG00000043956) ABHD2 (ENSHGLG00000032057) HAPLN3 (ENSHGLG00000005670) ENSHGLG00000005607 ISG20 (ENSHGLG00000048328) ENSHGLG00000048438 ENSHGLG00000036335 Sciuridae ANCESTRAL SPECIES 11 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Marmotini ANCESTRAL SPECIES 46 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Alpin marmot MODERN SPECIES 33 FES (ENSMMMG00000019275) MAN2A2 (ENSMMMG00000019306) HDDC3 (ENSMMMG00000019363) UNC45A (ENSMMMG00000019370) RCCD1 (ENSMMMG00000019386) PRC1 (ENSMMMG00000019398) VPS33B (ENSMMMG00000019643) ENSMMMG00000019658 TTLL13 (ENSMMMG00000019663) GDPGP1 (ENSMMMG00000019684) CIB1 (ENSMMMG00000019691) SEMA4B (ENSMMMG00000019801) IDH2 (ENSMMMG00000019823) ZNF710 (ENSMMMG00000019831) ARPIN (ENSMMMG00000019839) AP3S2 (ENSMMMG00000019848) ##22 ANPEP (ENSMMMG00000019853) MESP2 (ENSMMMG00000019870) WDR93 (ENSMMMG00000019877) PEX11A (ENSMMMG00000019894) PLIN1 (ENSMMMG00000019900) KIF7 (ENSMMMG00000019929) ENSMMMG00000019976 ENSMMMG00000019982 RHCG (ENSMMMG00000019986) POLG (ENSMMMG00000020022) FANCI (ENSMMMG00000020036) RLBP1 (ENSMMMG00000020074) ABHD2 (ENSMMMG00000020084) MFGE8 (ENSMMMG00000020100) HAPLN3 (ENSMMMG00000020152) Marmotini_b ANCESTRAL SPECIES 42 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Arctic ground squirrel MODERN SPECIES 56 FES (ENSUPAG00010015082) MAN2A2 (ENSUPAG00010015147) HDDC3 (ENSUPAG00010015221) UNC45A (ENSUPAG00010015229) RCCD1 (ENSUPAG00010015255) PRC1 (ENSUPAG00010015273) VPS33B (ENSUPAG00010015502) NGRN (ENSUPAG00010015547) TTLL13 (ENSUPAG00010015554) GDPGP1 (ENSUPAG00010015606) CIB1 (ENSUPAG00010015609) SEMA4B (ENSUPAG00010015668) IDH2 (ENSUPAG00010015704) ZNF710 (ENSUPAG00010015747) ARPIN (ENSUPAG00010015769) AP3S2 (ENSUPAG00010015776) ##22 ANPEP (ENSUPAG00010015791) MESP2 (ENSUPAG00010015815) MESP1 (ENSUPAG00010015825) WDR93 (ENSUPAG00010015839) PEX11A (ENSUPAG00010015860) PLIN1 (ENSUPAG00010015869) KIF7 (ENSUPAG00010015897) ENSUPAG00010016019 ENSUPAG00010016023 RHCG (ENSUPAG00010016033) POLG (ENSUPAG00010016054) FANCI (ENSUPAG00010016153) RLBP1 (ENSUPAG00010016218) ABHD2 (ENSUPAG00010016236) ENSUPAG00010016265 Squirrel MODERN SPECIES 83 FES (ENSSTOG00000014829) MAN2A2 (ENSSTOG00000014837) HDDC3 (ENSSTOG00000014848) UNC45A (ENSSTOG00000014852) RCCD1 (ENSSTOG00000023982) PRC1 (ENSSTOG00000016534) VPS33B (ENSSTOG00000016536) NGRN (ENSSTOG00000019593) TTLL13 (ENSSTOG00000010024) GDPGP1 (ENSSTOG00000010022) CIB1 (ENSSTOG00000010017) SEMA4B (ENSSTOG00000010006) IDH2 (ENSSTOG00000002733) ZNF710 (ENSSTOG00000029208) ARPIN (ENSSTOG00000022854) AP3S2 (ENSSTOG00000005150) ##22 ANPEP (ENSSTOG00000005119) MESP2 (ENSSTOG00000025753) MESP1 (ENSSTOG00000026434) WDR93 (ENSSTOG00000005070) PEX11A (ENSSTOG00000006148) PLIN1 (ENSSTOG00000025819) KIF7 (ENSSTOG00000023960) ENSSTOG00000006086 RHCG (ENSSTOG00000006067) POLG (ENSSTOG00000006860) FANCI (ENSSTOG00000006814) RLBP1 (ENSSTOG00000005869) ABHD2 (ENSSTOG00000005849) MFGE8 (ENSSTOG00000001748) HAPLN3 (ENSSTOG00000021403) Eurasian red squirrel MODERN SPECIES 11 FES (ENSSVLG00005007161) MAN2A2 (ENSSVLG00005007044) HDDC3 (ENSSVLG00005007007) UNC45A (ENSSVLG00005006896) RCCD1 (ENSSVLG00005006836) PRC1 (ENSSVLG00005006763) VPS33B (ENSSVLG00005006670) ENSSVLG00005006629 TTLL13 (ENSSVLG00005006594) GDPGP1 (ENSSVLG00005006571) CIB1 (ENSSVLG00005006496) SEMA4B (ENSSVLG00005006466) IDH2 (ENSSVLG00005006430) ZNF710 (ENSSVLG00005006393) ARPIN (ENSSVLG00005004661) AP3S2 (ENSSVLG00005004635) ##22 ANPEP (ENSSVLG00005004602) MESP2 (ENSSVLG00005004577) MESP1 (ENSSVLG00005004563) WDR93 (ENSSVLG00005004504) PEX11A (ENSSVLG00005004454) PLIN1 (ENSSVLG00005004414) ENSSVLG00005004398 KIF7 (ENSSVLG00005004359) TICRR (ENSSVLG00005004253) RHCG (ENSSVLG00005004206) POLG (ENSSVLG00005004153) FANCI (ENSSVLG00005004021) RLBP1 (ENSSVLG00005003928) ABHD2 (ENSSVLG00005003901) ENSSVLG00005003827 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Kangaroo rat MODERN SPECIES 334 Furin (ENSDORG00000014054) ENSDORG00000014057 ENSDORG00000014061 ENSDORG00000030197 Hddc3 (ENSDORG00000014065) Unc45a (ENSDORG00000014066) ENSDORG00000014069 Vps33b (ENSDORG00000014070) ENSDORG00000023165 Ttll13 (ENSDORG00000006220) Sema4b (ENSDORG00000006214) Gdpgp1 (ENSDORG00000006219) Idh2 (ENSDORG00000014489) ENSDORG00000014487 Arpin (ENSDORG00000004248) Ap3s2 (ENSDORG00000004247) ##22 Anpep (ENSDORG00000008622) Wdr93 (ENSDORG00000011237) Pex11a (ENSDORG00000023185) ENSDORG00000013784 Kif7 (ENSDORG00000007286) Rhcg (ENSDORG00000012914) Polg (ENSDORG00000014141) Fanci (ENSDORG00000014135) Rlbp1 (ENSDORG00000001939) Abhd2 (ENSDORG00000001935) Mfge8 (ENSDORG00000015707) ENSDORG00000029326 Aen (ENSDORG00000015546) Det1 (ENSDORG00000003023) Mrps11 (ENSDORG00000024352) Myomorpha ANCESTRAL SPECIES 13 ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Lesser Egyptian jerboa MODERN SPECIES 65 ENSJJAG00000024339 Man2a2 (ENSJJAG00000001354) Hddc3 (ENSJJAG00000014541) Unc45a (ENSJJAG00000017226) Rccd1 (ENSJJAG00000017472) Prc1 (ENSJJAG00000012077) Vps33b (ENSJJAG00000011508) Ngrn (ENSJJAG00000021806) Ttll13 (ENSJJAG00000019406) Gdpgp1 (ENSJJAG00000006994) Cib1 (ENSJJAG00000023947) Sema4b (ENSJJAG00000020686) Idh2 (ENSJJAG00000003839) ENSJJAG00000021767 Arpin (ENSJJAG00000016933) Ap3s2 (ENSJJAG00000022334) ##22 Anpep (ENSJJAG00000022111) Mesp2 (ENSJJAG00000007842) Mesp1 (ENSJJAG00000024239) Wdr93 (ENSJJAG00000000817) Pex11a (ENSJJAG00000014156) Plin1 (ENSJJAG00000020632) Kif7 (ENSJJAG00000019257) Ticrr (ENSJJAG00000019079) Rhcg (ENSJJAG00000014003) Polg (ENSJJAG00000020236) Fanci (ENSJJAG00000017556) Rlbp1 (ENSJJAG00000019859) ENSJJAG00000014710 Mfge8 (ENSJJAG00000021191) Hapln3 (ENSJJAG00000003756) Muroidea ANCESTRAL SPECIES 12 ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Muroidea_A ANCESTRAL SPECIES ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Cricetinae ANCESTRAL SPECIES 15 ENSGT00940000167833 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453.k ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l.a ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Chinese hamster chok1gshd MODERN SPECIES 101 Furin (ENSCGRG00001017951) Fes (ENSCGRG00001023097) Man2a2 (ENSCGRG00001021335) Hddc3 (ENSCGRG00001010568) Unc45a (ENSCGRG00001019215) Rccd1 (ENSCGRG00001020094) ENSCGRG00001011861 Vps33b (ENSCGRG00001014113) Ngrn (ENSCGRG00001010335) Ttll13 (ENSCGRG00001024736) Cib1 (ENSCGRG00001023687) Sema4b (ENSCGRG00001021155) Idh2 (ENSCGRG00001004244) ENSCGRG00001000281 Arpin (ENSCGRG00001022443) Ap3s2 (ENSCGRG00001000142) ##22 Anpep (ENSCGRG00001016244) Mesp2 (ENSCGRG00001015018) Mesp1 (ENSCGRG00001014587) Wdr93 (ENSCGRG00001000336) Pex11a (ENSCGRG00001017053) Plin1 (ENSCGRG00001013432) ENSCGRG00001011724 Kif7 (ENSCGRG00001015583) Ticrr (ENSCGRG00001012535) Rhcg (ENSCGRG00001023258) Polg (ENSCGRG00001017862) Fanci (ENSCGRG00001020390) Rlbp1 (ENSCGRG00001013382) Abhd2 (ENSCGRG00001001929) Mfge8 (ENSCGRG00001011973) Golden Hamster MODERN SPECIES 693 Fes (ENSMAUG00000019394) ENSMAUG00000017772 ENSMAUG00000000459 Hddc3 (ENSMAUG00000013551) Unc45a (ENSMAUG00000020263) ENSMAUG00000013171 Vps33b (ENSMAUG00000010971) Ngrn (ENSMAUG00000015177) Ttll13 (ENSMAUG00000012300) Gdpgp1 (ENSMAUG00000017397) Cib1 (ENSMAUG00000000589) Sema4b (ENSMAUG00000002395) Idh2 (ENSMAUG00000019935) Zfp710 (ENSMAUG00000000949) Arpin (ENSMAUG00000009802) Ap3s2 (ENSMAUG00000006872) ##22 Anpep (ENSMAUG00000010717) ENSMAUG00000003641 Wdr93 (ENSMAUG00000011463) Pex11a (ENSMAUG00000016721) ENSMAUG00000008691 Kif7 (ENSMAUG00000012171) Ticrr (ENSMAUG00000017732) Rhcg (ENSMAUG00000002938) ENSMAUG00000016933 ENSMAUG00000019060 ENSMAUG00000017797 Fanci (ENSMAUG00000019957) Rlbp1 (ENSMAUG00000012835) Abhd2 (ENSMAUG00000000130) Mfge8 (ENSMAUG00000014827) Cricetidae_B ANCESTRAL SPECIES 33 ENSGT01030000234638.b.b.c.a ENSGT00940000167833 ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Prairie vole MODERN SPECIES 9 Cemip (ENSMOCG00000006569) Abhd17c (ENSMOCG00000005210) Arnt2 (ENSMOCG00000017057) Ctxnd1 (ENSMOCG00000008499) Fah (ENSMOCG00000010641) Zfand6 (ENSMOCG00000012961) ENSMOCG00000019139 Ngrn (ENSMOCG00000001954) Ttll13 (ENSMOCG00000004181) Gdpgp1 (ENSMOCG00000013296) Cib1 (ENSMOCG00000017460) Sema4b (ENSMOCG00000021219) Idh2 (ENSMOCG00000001303) ENSMOCG00000001861 Arpin (ENSMOCG00000004031) Ap3s2 (ENSMOCG00000014646) ##22 Anpep (ENSMOCG00000000396) Mesp2 (ENSMOCG00000000232) Mesp1 (ENSMOCG00000000607) Wdr93 (ENSMOCG00000008278) Pex11a (ENSMOCG00000010626) ENSMOCG00000012406 Kif7 (ENSMOCG00000001711) ENSMOCG00000012109 Ticrr (ENSMOCG00000017017) Rhcg (ENSMOCG00000022826) Polg (ENSMOCG00000010126) Fanci (ENSMOCG00000021654) Rlbp1 (ENSMOCG00000014725) Abhd2 (ENSMOCG00000017256) Mfge8 (ENSMOCG00000022259) Northern American deer mouse MODERN SPECIES Fes (ENSPEMG00000007790) Man2a2 (ENSPEMG00000010591) Hddc3 (ENSPEMG00000015358) Unc45a (ENSPEMG00000017875) Rccd1 (ENSPEMG00000010404) Prc1 (ENSPEMG00000011356) Vps33b (ENSPEMG00000020450) Ngrn (ENSPEMG00000011643) Ttll13 (ENSPEMG00000005349) Gdpgp1 (ENSPEMG00000000001) Cib1 (ENSPEMG00000014252) Sema4b (ENSPEMG00000004988) Idh2 (ENSPEMG00000009784) ENSPEMG00000013020 Arpin (ENSPEMG00000010339) Ap3s2 (ENSPEMG00000013394) ##22 Anpep (ENSPEMG00000016532) Mesp2 (ENSPEMG00000014325) Mesp1 (ENSPEMG00000025923) Wdr93 (ENSPEMG00000013841) Pex11a (ENSPEMG00000009547) Plin1 (ENSPEMG00000018097) Kif7 (ENSPEMG00000011551) Ticrr (ENSPEMG00000017591) Rhcg (ENSPEMG00000017207) Polg (ENSPEMG00000015138) Fanci (ENSPEMG00000023214) Rlbp1 (ENSPEMG00000010592) Abhd2 (ENSPEMG00000016881) Mfge8 (ENSPEMG00000018759) Hapln3 (ENSPEMG00000016074) Murinae ANCESTRAL SPECIES ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Mus ANCESTRAL SPECIES ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Mus_A ANCESTRAL SPECIES 1 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Mus_B ANCESTRAL SPECIES ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Mus_C ANCESTRAL SPECIES 13 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Steppe mouse MODERN SPECIES 3233 Man2a2 (ENSMSIG00000016593) Hddc3 (ENSMSIG00000016637) Unc45a (ENSMSIG00000016656) Rccd1 (ENSMSIG00000016690) Prc1 (ENSMSIG00000016714) Vps33b (ENSMSIG00000017446) Ngrn (ENSMSIG00000017547) Ttll13 (ENSMSIG00000017551) Gdpgp1 (ENSMSIG00000017606) Cib1 (ENSMSIG00000017619) Sema4b (ENSMSIG00000017681) Idh2 (ENSMSIG00000017730) Zfp710 (ENSMSIG00000017757) ENSMSIG00000017784 Arpin (ENSMSIG00000017788) Ap3s2 (ENSMSIG00000017828) ##22 Anpep (ENSMSIG00000017851) Mesp2 (ENSMSIG00000017881) Mesp1 (ENSMSIG00000017895) Wdr93 (ENSMSIG00000017904) ENSMSIG00000017963 Plin1 (ENSMSIG00000017980) Kif7 (ENSMSIG00000018055) ENSMSIG00000018144 Ticrr (ENSMSIG00000018150) ENSMSIG00000018179 ENSMSIG00000018236 Polg (ENSMSIG00000018239) Fanci (ENSMSIG00000018281) Rlbp1 (ENSMSIG00000018394) Abhd2 (ENSMSIG00000018413) spretus MODERN SPECIES 16 Fes (MGP_SPRETEiJ_G0031007) Man2a2 (MGP_SPRETEiJ_G0031006) Hddc3 (MGP_SPRETEiJ_G0031005) Unc45a (MGP_SPRETEiJ_G0031004) Prc1 (MGP_SPRETEiJ_G0031003) Rccd1 (MGP_SPRETEiJ_G0031002) Vps33b (MGP_SPRETEiJ_G0031001) Ngrn (MGP_SPRETEiJ_G0031000) Ttll13 (MGP_SPRETEiJ_G0030999) Gdpgp1 (MGP_SPRETEiJ_G0030998) Cib1 (MGP_SPRETEiJ_G0030997) Sema4b (MGP_SPRETEiJ_G0030996) Idh2 (MGP_SPRETEiJ_G0030995) Zfp710 (MGP_SPRETEiJ_G0030994) Arpin (MGP_SPRETEiJ_G0030993) Ap3s2 (MGP_SPRETEiJ_G0030992) ##22 MGP_SPRETEiJ_G0030991 Mesp2 (MGP_SPRETEiJ_G0030990) Mesp1 (MGP_SPRETEiJ_G0030989) Wdr93 (MGP_SPRETEiJ_G0030988) Pex11a (MGP_SPRETEiJ_G0030987) Plin1 (MGP_SPRETEiJ_G0030986) Kif7 (MGP_SPRETEiJ_G0030985) Ticrr (MGP_SPRETEiJ_G0030984) Rhcg (MGP_SPRETEiJ_G0030983) Polg (MGP_SPRETEiJ_G0030982) Fanci (MGP_SPRETEiJ_G0030981) Rlbp1 (MGP_SPRETEiJ_G0030980) Abhd2 (MGP_SPRETEiJ_G0030979) Mfge8 (MGP_SPRETEiJ_G0030978) Hapln3 (MGP_SPRETEiJ_G0030977) Mouse MODERN SPECIES 16 Fes (ENSMUSG00000053158) Man2a2 (ENSMUSG00000038886) Hddc3 (ENSMUSG00000030532) Unc45a (ENSMUSG00000030533) Prc1 (ENSMUSG00000038943) Rccd1 (ENSMUSG00000038930) Vps33b (ENSMUSG00000030534) Ngrn (ENSMUSG00000047084) Ttll13 (ENSMUSG00000045467) Gdpgp1 (ENSMUSG00000050973) Cib1 (ENSMUSG00000030538) Sema4b (ENSMUSG00000030539) Idh2 (ENSMUSG00000030541) Zfp710 (ENSMUSG00000048897) Arpin (ENSMUSG00000039043) Ap3s2 (ENSMUSG00000063801) ##22 Anpep (ENSMUSG00000039062) Mesp2 (ENSMUSG00000030543) Mesp1 (ENSMUSG00000030544) Wdr93 (ENSMUSG00000039099) Pex11a (ENSMUSG00000030545) Plin1 (ENSMUSG00000030546) Kif7 (ENSMUSG00000050382) Ticrr (ENSMUSG00000046591) Rhcg (ENSMUSG00000030549) Polg (ENSMUSG00000039176) Fanci (ENSMUSG00000039187) Rlbp1 (ENSMUSG00000039194) Abhd2 (ENSMUSG00000039202) Mfge8 (ENSMUSG00000030605) Hapln3 (ENSMUSG00000030606) Ryukyu mouse MODERN SPECIES 16 Fes (MGP_CAROLIEiJ_G0029905) Man2a2 (MGP_CAROLIEiJ_G0029904) Hddc3 (MGP_CAROLIEiJ_G0029903) Unc45a (MGP_CAROLIEiJ_G0029902) Prc1 (MGP_CAROLIEiJ_G0029901) Rccd1 (MGP_CAROLIEiJ_G0029900) Vps33b (MGP_CAROLIEiJ_G0029899) Ngrn (MGP_CAROLIEiJ_G0029898) Ttll13 (MGP_CAROLIEiJ_G0029897) Gdpgp1 (MGP_CAROLIEiJ_G0029896) Cib1 (MGP_CAROLIEiJ_G0029895) Sema4b (MGP_CAROLIEiJ_G0029894) Idh2 (MGP_CAROLIEiJ_G0029893) Zfp710 (MGP_CAROLIEiJ_G0029892) Arpin (MGP_CAROLIEiJ_G0029891) Ap3s2 (MGP_CAROLIEiJ_G0029890) ##22 Anpep (MGP_CAROLIEiJ_G0029889) Mesp2 (MGP_CAROLIEiJ_G0029888) Mesp1 (MGP_CAROLIEiJ_G0029887) Wdr93 (MGP_CAROLIEiJ_G0029886) Pex11a (MGP_CAROLIEiJ_G0029885) Plin1 (MGP_CAROLIEiJ_G0029884) Kif7 (MGP_CAROLIEiJ_G0029883) Ticrr (MGP_CAROLIEiJ_G0029882) Rhcg (MGP_CAROLIEiJ_G0029881) Polg (MGP_CAROLIEiJ_G0029880) Fanci (MGP_CAROLIEiJ_G0029879) Rlbp1 (MGP_CAROLIEiJ_G0029878) Abhd2 (MGP_CAROLIEiJ_G0029877) Mfge8 (MGP_CAROLIEiJ_G0029876) Hapln3 (MGP_CAROLIEiJ_G0029875) Shrew mouse MODERN SPECIES Fes (MGP_PahariEiJ_G0013127) Man2a2 (MGP_PahariEiJ_G0013126) Hddc3 (MGP_PahariEiJ_G0013125) Unc45a (MGP_PahariEiJ_G0013124) Prc1 (MGP_PahariEiJ_G0013123) Rccd1 (MGP_PahariEiJ_G0013122) Vps33b (MGP_PahariEiJ_G0013121) Ngrn (MGP_PahariEiJ_G0013120) Ttll13 (MGP_PahariEiJ_G0013119) Gdpgp1 (MGP_PahariEiJ_G0013118) Cib1 (MGP_PahariEiJ_G0013117) Sema4b (MGP_PahariEiJ_G0013116) Idh2 (MGP_PahariEiJ_G0013115) Zfp710 (MGP_PahariEiJ_G0013114) Arpin (MGP_PahariEiJ_G0013113) Ap3s2 (MGP_PahariEiJ_G0013112) ##22 Anpep (MGP_PahariEiJ_G0013111) Mesp2 (MGP_PahariEiJ_G0013110) Mesp1 (MGP_PahariEiJ_G0013109) Wdr93 (MGP_PahariEiJ_G0013108) Pex11a (MGP_PahariEiJ_G0013107) Plin1 (MGP_PahariEiJ_G0013106) Kif7 (MGP_PahariEiJ_G0013105) Ticrr (MGP_PahariEiJ_G0013104) Rhcg (MGP_PahariEiJ_G0013103) Polg (MGP_PahariEiJ_G0013102) Fanci (MGP_PahariEiJ_G0013101) Rlbp1 (MGP_PahariEiJ_G0013100) Abhd2 (MGP_PahariEiJ_G0013099) Mfge8 (MGP_PahariEiJ_G0013098) Hapln3 (MGP_PahariEiJ_G0013097) Rat MODERN SPECIES LOC108349446 (ENSRNOG00000063715) Hddc3 (ENSRNOG00000012236) Unc45a (ENSRNOG00000012357) Rccd1 (ENSRNOG00000042059) Prc1 (ENSRNOG00000013057) Vps33b (ENSRNOG00000013149) Ngrn (ENSRNOG00000013553) Ttll13 (ENSRNOG00000056362) Gdpgp1 (ENSRNOG00000064293) Cib1 (ENSRNOG00000033498) Sema4b (ENSRNOG00000025167) Naa38-ps1 (ENSRNOG00000070736) Idh2 (ENSRNOG00000013949) Zfp710 (ENSRNOG00000014278) Arpin (ENSRNOG00000014589) Ap3s2 (ENSRNOG00000043141) ##22 Anpep (ENSRNOG00000014610) Mesp2 (ENSRNOG00000014925) Mesp1 (ENSRNOG00000014951) AC096024.2 (ENSRNOG00000034206) Wdr93 (ENSRNOG00000026514) Pex11a (ENSRNOG00000015003) Plin1 (ENSRNOG00000015086) LOC120099868 (ENSRNOG00000070288) Kif7 (ENSRNOG00000026857) Ticrr (ENSRNOG00000015520) Rhcg (ENSRNOG00000015526) Atp5mpl-ps1 (ENSRNOG00000070574) LOC685596 (ENSRNOG00000032204) ENSRNOG00000069120 Polg (ENSRNOG00000032293) Upper Galilee mountains blind mole rat MODERN SPECIES 1645 ENSNGAG00000020580 ENSNGAG00000015735 ENSNGAG00000000437 Unc45a (ENSNGAG00000001703) Rccd1 (ENSNGAG00000013437) Prc1 (ENSNGAG00000019170) Vps33b (ENSNGAG00000016165) Ngrn (ENSNGAG00000018847) Ttll13 (ENSNGAG00000020633) Gdpgp1 (ENSNGAG00000015420) Cib1 (ENSNGAG00000015587) Sema4b (ENSNGAG00000001047) Idh2 (ENSNGAG00000004440) ENSNGAG00000020045 Arpin (ENSNGAG00000011615) Ap3s2 (ENSNGAG00000012940) ##22 Anpep (ENSNGAG00000000400) Mesp2 (ENSNGAG00000000375) Mesp1 (ENSNGAG00000010748) Wdr93 (ENSNGAG00000016076) Pex11a (ENSNGAG00000014804) ENSNGAG00000018874 Kif7 (ENSNGAG00000000476) ENSNGAG00000017581 ENSNGAG00000020172 Rhcg (ENSNGAG00000016159) ENSNGAG00000000264 ENSNGAG00000003596 Fanci (ENSNGAG00000013177) Rlbp1 (ENSNGAG00000018946) Abhd2 (ENSNGAG00000011822) Primates ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Bushbaby MODERN SPECIES 144 IDH2 (ENSOGAG00000034936) ZNF710 (ENSOGAG00000016446) ARPIN (ENSOGAG00000016438) AP3S2 (ENSOGAG00000030982) ##22 ANPEP (ENSOGAG00000032572) MESP2 (ENSOGAG00000025742) WDR93 (ENSOGAG00000016610) PEX11A (ENSOGAG00000009370) PLIN1 (ENSOGAG00000004946) PCSK6 (ENSOGAG00000003833) ENSOGAG00000016898 ENSOGAG00000028584 SELENOS (ENSOGAG00000016896) CHSY1 (ENSOGAG00000003832) ENSOGAG00000005869 ENSOGAG00000026287 ALDH1A3 (ENSOGAG00000005864) ASB7 (ENSOGAG00000000971) CERS3 (ENSOGAG00000008051) Lemuriformes DUPLICATION Lemuriformes DUPLICATION Lemuriformes ANCESTRAL SPECIES 6 ENSGT00950000182890.A.a.b.b.b ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.gb ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159.q ENSGT00530000064242.b ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00970000193421.C.b.e.a ##22 ENSGT00940000154540.a ENSGT00940000153883.b ENSGT00390000008135.eb ENSGT00510000047059.l ENSGT00940000159212.a ENSGT00940000156014 ENSGT00940000154823 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000162266 ENSGT00940000160014 ENSGT00940000160349 ENSGT00940000159414 ENSGT00940000159426 ENSGT00550000075050 Lemuriformes_a ANCESTRAL SPECIES 14 ENSGT00950000182890.A.a.b.b.b ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.gb ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159.q ENSGT00530000064242.b ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00970000193421.C.b.e.a ##22 ENSGT00940000154540.a ENSGT00940000153883.b ENSGT00390000008135.eb ENSGT00510000047059.l ENSGT00940000159212.a ENSGT00940000156014 ENSGT00940000154823 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00940000162266 ENSGT00940000160014 ENSGT00940000160349 ENSGT00940000159414 ENSGT00940000159426 ENSGT00550000075050 Coquerels sifaka MODERN SPECIES 192 ZNF713 (ENSPCOG00000027199) ENSPCOG00000013668 NIPSNAP2 (ENSPCOG00000016851) PSPH (ENSPCOG00000005177) ENSPCOG00000013779 SUMF2 (ENSPCOG00000026090) PHKG1 (ENSPCOG00000022397) ENSPCOG00000024678 ENSPCOG00000008032 VKORC1L1 (ENSPCOG00000027604) GUSB (ENSPCOG00000028081) ENSPCOG00000017582 ENSPCOG00000027340 TPST1 (ENSPCOG00000021376) KCTD7 (ENSPCOG00000027726) ENSPCOG00000019247 ##22 RABGEF1 (ENSPCOG00000024294) TMEM248 (ENSPCOG00000016391) SBDS (ENSPCOG00000021098) ENSPCOG00000023136 ENSPCOG00000015294 CALN1 (ENSPCOG00000027421) GALNT17 (ENSPCOG00000004671) ENSPCOG00000027902 ENSPCOG00000026527 AUTS2 (ENSPCOG00000024730) ENSPCOG00000004450 CASTOR2 (ENSPCOG00000018780) RCC1L (ENSPCOG00000026846) ENSPCOG00000018327 ENSPCOG00000023746 Mouse lemur MODERN SPECIES 8 ENSMICG00000027283 ENSMICG00000041880 MRPS17 (ENSMICG00000046806) NIPSNAP2 (ENSMICG00000027686) ENSMICG00000032693 ENSMICG00000028640 SUMF2 (ENSMICG00000027938) PHKG1 (ENSMICG00000014143) CHCHD2 (ENSMICG00000042713) VKORC1L1 (ENSMICG00000027746) GUSB (ENSMICG00000004175) ASL (ENSMICG00000033809) CRCP (ENSMICG00000004191) TPST1 (ENSMICG00000036292) KCTD7 (ENSMICG00000028794) ENSMICG00000033306 ##22 ENSMICG00000011044 TMEM248 (ENSMICG00000005334) SBDS (ENSMICG00000014366) ENSMICG00000014374 CALN1 (ENSMICG00000001453) GALNT17 (ENSMICG00000001449) AUTS2 (ENSMICG00000000923) GREM2 (ENSMICG00000044365) FMN2 (ENSMICG00000037462) CHRM3 (ENSMICG00000031202) ZP4 (ENSMICG00000016091) RYR2 (ENSMICG00000015975) MTR (ENSMICG00000015938) ACTN2 (ENSMICG00000015908) HEATR1 (ENSMICG00000015859) Lemuriformes ANCESTRAL SPECIES ENSGT00970000193421.C.b.e.b ##22 Lemuriformes_a ANCESTRAL SPECIES 59 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.e.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Coquerels sifaka MODERN SPECIES 289 FURIN (ENSPCOG00000017388) FES (ENSPCOG00000028454) MAN2A2 (ENSPCOG00000015017) HDDC3 (ENSPCOG00000001722) UNC45A (ENSPCOG00000020737) RCCD1 (ENSPCOG00000020749) PRC1 (ENSPCOG00000016674) VPS33B (ENSPCOG00000022064) NGRN (ENSPCOG00000018441) TTLL13 (ENSPCOG00000020785) CIB1 (ENSPCOG00000014951) SEMA4B (ENSPCOG00000001121) IDH2 (ENSPCOG00000019385) ZNF710 (ENSPCOG00000018724) ARPIN (ENSPCOG00000023002) ENSPCOG00000026989 ##22 ANPEP (ENSPCOG00000014730) MESP2 (ENSPCOG00000018659) MESP1 (ENSPCOG00000000342) WDR93 (ENSPCOG00000022396) PEX11A (ENSPCOG00000014584) PLIN1 (ENSPCOG00000014622) KIF7 (ENSPCOG00000018726) TICRR (ENSPCOG00000013938) RHCG (ENSPCOG00000004475) POLG (ENSPCOG00000022538) FANCI (ENSPCOG00000021705) ENSPCOG00000015600 RLBP1 (ENSPCOG00000000662) ABHD2 (ENSPCOG00000016367) MFGE8 (ENSPCOG00000025633) Lemuriformes ANCESTRAL SPECIES 43 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b.f ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Mouse lemur MODERN SPECIES 31 FURIN (ENSMICG00000027223) FES (ENSMICG00000015372) MAN2A2 (ENSMICG00000015397) HDDC3 (ENSMICG00000041559) UNC45A (ENSMICG00000008324) RCCD1 (ENSMICG00000008338) PRC1 (ENSMICG00000014826) VPS33B (ENSMICG00000014841) NGRN (ENSMICG00000047039) TTLL13 (ENSMICG00000012703) CIB1 (ENSMICG00000037035) SEMA4B (ENSMICG00000012684) IDH2 (ENSMICG00000011539) ZNF710 (ENSMICG00000011530) ARPIN (ENSMICG00000033601) ENSMICG00000028792 ##22 ANPEP (ENSMICG00000005589) MESP2 (ENSMICG00000044704) MESP1 (ENSMICG00000031567) WDR93 (ENSMICG00000008313) ENSMICG00000046741 PLIN1 (ENSMICG00000008296) KIF7 (ENSMICG00000040228) TICRR (ENSMICG00000008265) RHCG (ENSMICG00000003166) ADAMTSL3 (ENSMICG00000004994) SAXO2 (ENSMICG00000038308) EFL1 (ENSMICG00000027853) MEX3B (ENSMICG00000043733) TMC3 (ENSMICG00000047917) STARD5 (ENSMICG00000037549) Haplorrhini ANCESTRAL SPECIES 36 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Tarsier MODERN SPECIES 6669 ARPIN (ENSTSYG00000033845) AP3S2 (ENSTSYG00000002538) ##22 ANPEP (ENSTSYG00000035014) ENSTSYG00000029903 WDR93 (ENSTSYG00000012001) PEX11A (ENSTSYG00000013744) PLIN1 (ENSTSYG00000029869) KIF7 (ENSTSYG00000036014) ENSTSYG00000025913 RHCG (ENSTSYG00000010178) POLG (ENSTSYG00000012929) FANCI (ENSTSYG00000012901) RLBP1 (ENSTSYG00000034357) ABHD2 (ENSTSYG00000005161) ENSTSYG00000028467 MFGE8 (ENSTSYG00000031077) HAPLN3 (ENSTSYG00000014650) Simiiformes ANCESTRAL SPECIES 28 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Platyrrhini ANCESTRAL SPECIES 38 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Cebidae ANCESTRAL SPECIES 36 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 Marmoset MODERN SPECIES 18 FES (ENSCJAG00000009738) MAN2A2 (ENSCJAG00000009678) HDDC3 (ENSCJAG00000009674) UNC45A (ENSCJAG00000009605) RCCD1 (ENSCJAG00000011763) PRC1 (ENSCJAG00000009561) VPS33B (ENSCJAG00000009526) NGRN (ENSCJAG00000009520) TTLL13 (ENSCJAG00000009514) GDPGP1 (ENSCJAG00000009511) CIB1 (ENSCJAG00000009505) SEMA4B (ENSCJAG00000009482) IDH2 (ENSCJAG00000009440) ZNF710 (ENSCJAG00000009435) ARPIN (ENSCJAG00000007127) AP3S2 (ENSCJAG00000083796) ##22 ANPEP (ENSCJAG00000007096) MESP2 (ENSCJAG00000080320) WDR93 (ENSCJAG00000012691) PEX11A (ENSCJAG00000012706) PLIN1 (ENSCJAG00000012709) MESP1 (ENSCJAG00000007088) KIF7 (ENSCJAG00000012723) TICRR (ENSCJAG00000012742) RHCG (ENSCJAG00000054474) POLG (ENSCJAG00000012773) FANCI (ENSCJAG00000012809) RLBP1 (ENSCJAG00000012881) ABHD2 (ENSCJAG00000073988) MFGE8 (ENSCJAG00000012940) HAPLN3 (ENSCJAG00000012941) Catarrhini ANCESTRAL SPECIES 9 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b Hominoidea ANCESTRAL SPECIES 28 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00390000011515.c.b.a ENSGT00530000063484.a.d ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00910000148745 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00520000059044 ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b Hominidae ANCESTRAL SPECIES 27 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00390000011515.c.b.a ENSGT00530000063484.a.d ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00910000148745 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Orangutan MODERN SPECIES 6 HDDC3 (ENSPPYG00000006788) MAN2A2 (ENSPPYG00000006787) FES (ENSPPYG00000006786) FURIN (ENSPPYG00000006785) BLM (ENSPPYG00000006784) CRTC3 (ENSPPYG00000006783) IQGAP1 (ENSPPYG00000006782) ENSPPYG00000006781 NGRN (ENSPPYG00000006779) GDPGP1 (ENSPPYG00000033922) CIB1 (ENSPPYG00000006777) SEMA4B (ENSPPYG00000006776) IDH2 (ENSPPYG00000006775) ZNF710 (ENSPPYG00000034046) ARPIN (ENSPPYG00000006774) AP3S2 (ENSPPYG00000006773) ##22 ENSPPYG00000037279 ANPEP (ENSPPYG00000006772) MESP2 (ENSPPYG00000006771) MESP1 (ENSPPYG00000006864) WDR93 (ENSPPYG00000006770) PEX11A (ENSPPYG00000006769) PLIN1 (ENSPPYG00000006768) KIF7 (ENSPPYG00000006767) TICRR (ENSPPYG00000006766) RHCG (ENSPPYG00000006765) POLG (ENSPPYG00000006763) FANCI (ENSPPYG00000006762) RLBP1 (ENSPPYG00000006761) ABHD2 (ENSPPYG00000006760) MFGE8 (ENSPPYG00000006759) Homo/Pan/Gorilla group ANCESTRAL SPECIES 30 ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00530000062932.c.a.a.a.a.a.b.b ENSGT00390000011515.c.b.a ENSGT00530000063484.a.d ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00910000148745 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Homo/Pan group ANCESTRAL SPECIES 29 ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00530000062932.c.a.a.a.a.a.b.b ENSGT00390000011515.c.b.a ENSGT00530000063484.a.d ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Human MODERN SPECIES 6 FURIN (ENSG00000140564) BLM (ENSG00000197299) CRTC3 (ENSG00000140577) IQGAP1 (ENSG00000140575) ZNF774 (ENSG00000196391) ENSG00000275674 NGRN (ENSG00000182768) TTLL13 (ENSG00000213471) GDPGP1 (ENSG00000183208) CIB1 (ENSG00000185043) SEMA4B (ENSG00000185033) IDH2 (ENSG00000182054) ZNF710 (ENSG00000140548) ARPIN (ENSG00000242498) ARPIN-AP3S2 (ENSG00000250021) AP3S2 (ENSG00000157823) ##22 ANPEP (ENSG00000166825) MESP2 (ENSG00000188095) MESP1 (ENSG00000166823) WDR93 (ENSG00000140527) PEX11A (ENSG00000166821) PLIN1 (ENSG00000166819) KIF7 (ENSG00000166813) TICRR (ENSG00000140534) RHCG (ENSG00000140519) POLGARF (ENSG00000291307) POLG (ENSG00000140521) FANCI (ENSG00000140525) RLBP1 (ENSG00000140522) ABHD2 (ENSG00000140526) MFGE8 (ENSG00000140545) Cercopithecidae ANCESTRAL SPECIES 7 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00910000147807 ENSGT00940000154799.rb.b Cercopithecinae ANCESTRAL SPECIES 2 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000155158.j ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00940000168012 ENSGT00390000014472.e.b ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Cercopithecinae_b ANCESTRAL SPECIES 47 ENSGT00940000168012 ENSGT00390000014472.e.b ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.k ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a Olive baboon MODERN SPECIES 17 MAN2A2 (ENSPANG00000022247) FES (ENSPANG00000020549) FURIN (ENSPANG00000020413) BLM (ENSPANG00000018572) ENSPANG00000040003 CRTC3 (ENSPANG00000014253) ENSPANG00000011173 ENSPANG00000042110 ENSPANG00000049262 ENSPANG00000037368 ZNF774 (ENSPANG00000046993) ENSPANG00000021467 ENSPANG00000050697 IDH2 (ENSPANG00000011176) ARPIN (ENSPANG00000040247) AP3S2 (ENSPANG00000024127) ##22 ANPEP (ENSPANG00000021058) MESP2 (ENSPANG00000021057) ENSPANG00000045283 WDR93 (ENSPANG00000021468) PEX11A (ENSPANG00000020633) PLIN1 (ENSPANG00000014257) KIF7 (ENSPANG00000011178) TICRR (ENSPANG00000011179) ENSPANG00000047678 RHCG (ENSPANG00000021471) POLG (ENSPANG00000014259) FANCI (ENSPANG00000014260) RLBP1 (ENSPANG00000011182) ABHD2 (ENSPANG00000025597) ENSPANG00000039388 Macaca ANCESTRAL SPECIES 1 ENSGT00940000157220 ENSGT00940000156800 ENSGT00940000155158.j ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00940000156876.k.b ENSGT00940000168012 ENSGT00390000014472.e.b ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00520000059044 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00940000154799.rb.b ENSGT00950000182902.b.a ENSGT00950000183119.a.e.b.n.b ENSGT00940000156049 Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000011608 ENSGT01030000234638.b.b.c.a ENSGT00940000158881 ENSGT00940000157220 ENSGT00940000156800 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000163116 ENSGT00390000014472.e.b ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT01100000263493.a.b.b.b.b.a.a.a.b.b.a ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT01100000264560 Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000047976 BLM (ENSMFAG00000042982) CRTC3 (ENSMFAG00000043264) ENSMFAG00000053003 ENSMFAG00000063635 IQGAP1 (ENSMFAG00000044182) ZNF774 (ENSMFAG00000000515) TTLL13 (ENSMFAG00000000742) GDPGP1 (ENSMFAG00000023109) CIB1 (ENSMFAG00000002360) SEMA4B (ENSMFAG00000034089) IDH2 (ENSMFAG00000038291) ENSMFAG00000035746 ENSMFAG00000061779 ARPIN (ENSMFAG00000045494) AP3S2 (ENSMFAG00000057910) ##22 MESP2 (ENSMFAG00000037257) MESP1 (ENSMFAG00000045799) ANPEP (ENSMFAG00000031450) WDR93 (ENSMFAG00000035737) PEX11A (ENSMFAG00000055282) PLIN1 (ENSMFAG00000034321) KIF7 (ENSMFAG00000044171) TICRR (ENSMFAG00000031426) RHCG (ENSMFAG00000003348) POLG (ENSMFAG00000042476) FANCI (ENSMFAG00000035758) ENSMFAG00000064903 RLBP1 (ENSMFAG00000036414) ENSMFAG00000059216 ABHD2 (ENSMFAG00000034068) Atlantogenata ANCESTRAL SPECIES 2 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Xenarthra ANCESTRAL SPECIES ENSGT00970000193421.C.b ##22 Sloth MODERN SPECIES 4613 AP3S2 (ENSCHOG00000003359) ##22 Afrotheria ANCESTRAL SPECIES 20 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Afrotheria_a ANCESTRAL SPECIES 19 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00390000011608 ENSGT00940000159320 ENSGT00940000162149 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00530000064251 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.l ENSGT00390000009995 ENSGT00390000014273.a ENSGT00950000182920.a ENSGT00940000159749 ENSGT00390000005222 ENSGT00950000182844.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000160026 ENSGT00950000182902.b.a ENSGT00940000156049 ENSGT00940000159628 ENSGT00940000155971 Elephant MODERN SPECIES 285 FES (ENSLAFG00000005977) MAN2A2 (ENSLAFG00000007107) HDDC3 (ENSLAFG00000007114) UNC45A (ENSLAFG00000007118) RCCD1 (ENSLAFG00000007122) PRC1 (ENSLAFG00000013123) VPS33B (ENSLAFG00000010644) NGRN (ENSLAFG00000020610) TTLL13 (ENSLAFG00000005024) GDPGP1 (ENSLAFG00000022790) CIB1 (ENSLAFG00000025868) SEMA4B (ENSLAFG00000005020) IDH2 (ENSLAFG00000010171) ZNF710 (ENSLAFG00000010169) ARPIN (ENSLAFG00000010996) AP3S2 (ENSLAFG00000020799) ##22 ANPEP (ENSLAFG00000010600) ENSLAFG00000021758 MESP1 (ENSLAFG00000022195) WDR93 (ENSLAFG00000003753) PEX11A (ENSLAFG00000000556) PLIN1 (ENSLAFG00000006093) KIF7 (ENSLAFG00000006086) TICRR (ENSLAFG00000006079) RHCG (ENSLAFG00000015094) POLG (ENSLAFG00000010216) FANCI (ENSLAFG00000016287) RLBP1 (ENSLAFG00000016281) ABHD2 (ENSLAFG00000016278) MFGE8 (ENSLAFG00000030365) HAPLN3 (ENSLAFG00000009878) Hyrax MODERN SPECIES 4237 ARPIN (ENSPCAG00000011519) ENSPCAG00000011458 ##22 Sauria ANCESTRAL SPECIES 10 ENSGT01030000234534.B.a.b ENSGT00950000182965.a.b.b.b ENSGT00940000159819 ENSGT00390000017697.a ENSGT00390000016791 ENSGT00390000018400 ENSGT01040000240503.A.a.a ENSGT00530000063675.a ENSGT00940000156346 ENSGT00510000048144 ENSGT00940000156800 ENSGT00940000160227 ENSGT00940000157599 ENSGT00390000012355.B.a ENSGT00940000159833 ENSGT00970000193421.C.b ##22 ENSGT00530000063712.a.a ENSGT00940000154876.b ENSGT00530000064251 ENSGT00940000161170 ENSGT00390000012547.a ENSGT00940000154870.D ENSGT00940000158927 ENSGT00390000016718 ENSGT00940000161367 ENSGT00390000014472 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000164520 ENSGT00940000159320 Archelosauria ANCESTRAL SPECIES 13 ENSGT01030000234534.B.a.b ENSGT00950000182965.a.b.b.b ENSGT00940000159819 ENSGT00390000017697.a ENSGT00390000016791 ENSGT00390000018400 ENSGT01040000240503.A.a.a ENSGT00530000063675.a ENSGT00940000156346 ENSGT00510000048144 ENSGT00940000156800 ENSGT00940000160227 ENSGT00940000157599 ENSGT00390000012355.B.a ENSGT00940000159833 ENSGT00970000193421.C.b ##22 ENSGT00530000063712.a.a ENSGT00940000154876.b ENSGT00530000064251 ENSGT00940000161170 ENSGT00390000012547.a ENSGT00940000154870.D ENSGT00940000158927 ENSGT00390000016718 ENSGT00940000161367 ENSGT00390000014472 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000164520 ENSGT00940000159320 Archosauria ANCESTRAL SPECIES 9 ENSGT00940000157475 ENSGT00950000182965.a.b.b.a ENSGT00940000159819 ENSGT00390000017697.a ENSGT00390000016791 ENSGT00390000018400 ENSGT01040000240503.A.a.a ENSGT00530000063675.a ENSGT00940000156346 ENSGT00510000048144 ENSGT00940000156800 ENSGT00940000160227 ENSGT00940000157599 ENSGT00390000012355.B.a ENSGT00940000159833 ENSGT00970000193421.C.b ##22 ENSGT00530000063712.a.a ENSGT00940000154876.b ENSGT00940000161170 ENSGT00390000012547.a ENSGT00940000154870.D ENSGT00940000158927 ENSGT00390000016718 ENSGT00940000161367 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000164520 ENSGT00940000159320 ENSGT00950000185474 ENSGT01030000234638.b.b.c.a Aves ANCESTRAL SPECIES 14 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a ENSGT00940000159819 African ostrich MODERN SPECIES 1020 IDH2 (ENSSCUG00000013168) ZNF710 (ENSSCUG00000013158) AP3S2 (ENSSCUG00000013156) ##22 ENSSCUG00000013155 TMED3 (ENSSCUG00000013152) ENSSCUG00000013151 RASGRF1 (ENSSCUG00000013144) ENSSCUG00000013142 ENSSCUG00000013139 BLM (ENSSCUG00000013117) WDR76 (ENSSCUG00000013091) FRMD5 (ENSSCUG00000013079) GOLM2 (ENSSCUG00000013072) CTDSPL2 (ENSSCUG00000013071) EIF3J (ENSSCUG00000013070) SPG11 (ENSSCUG00000013068) CIAO2A (ENSSCUG00000013067) ADAMTS7 (ENSSCUG00000013052) Neognathae ANCESTRAL SPECIES 11 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a Neognathae_b ANCESTRAL SPECIES 13 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a Passeriformes ANCESTRAL SPECIES 12 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a Great tit MODERN SPECIES 1 MFAP1 (ENSPMJG00000012029) FURIN (ENSPMJG00000012028) FES (ENSPMJG00000012027) MAN2A2 (ENSPMJG00000012026) UNC45A (ENSPMJG00000012025) ENSPMJG00000012024 PRC1 (ENSPMJG00000012022) VPS33B (ENSPMJG00000012016) HDDC3 (ENSPMJG00000012013) TTLL13 (ENSPMJG00000012011) CIB1 (ENSPMJG00000012000) GDPGP1 (ENSPMJG00000011999) SEMA4B (ENSPMJG00000011998) IDH2 (ENSPMJG00000011671) ZNF710 (ENSPMJG00000011654) AP3S2 (ENSPMJG00000011650) ##22 ANPEP (ENSPMJG00000011645) ENSPMJG00000011643 ENSPMJG00000011642 TMED3 (ENSPMJG00000011640) ENSPMJG00000011639 ENSPMJG00000011636 RASGRF1 (ENSPMJG00000011635) CTSH (ENSPMJG00000011634) BLM (ENSPMJG00000011588) WDR76 (ENSPMJG00000011587) FRMD5 (ENSPMJG00000011586) GOLM2 (ENSPMJG00000011585) CTDSPL2 (ENSPMJG00000011584) EIF3J (ENSPMJG00000011583) SPG11 (ENSPMJG00000011303) Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00390000008502 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a ENSGT00940000159819.f Passeroidea ANCESTRAL SPECIES 12 ENSGT00390000008502 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a ENSGT00940000159819.f Common canary MODERN SPECIES 12 SERINC4 (ENSSCAG00000014400) ENSSCAG00000014396 MFAP1 (ENSSCAG00000014392) FURIN (ENSSCAG00000014387) FES (ENSSCAG00000014381) MAN2A2 (ENSSCAG00000014295) UNC45A (ENSSCAG00000014259) PRC1 (ENSSCAG00000014249) ENSSCAG00000014241 VPS33B (ENSSCAG00000014226) TTLL13 (ENSSCAG00000014214) CIB1 (ENSSCAG00000014212) SEMA4B (ENSSCAG00000014205) IDH2 (ENSSCAG00000014199) ENSSCAG00000014195 AP3S2 (ENSSCAG00000014192) ##22 ANPEP (ENSSCAG00000014187) ENSSCAG00000014184 TMED3 (ENSSCAG00000014179) RASGRF1 (ENSSCAG00000013440) CTSH (ENSSCAG00000013083) BLM (ENSSCAG00000012887) WDR76 (ENSSCAG00000012854) ENSSCAG00000012847 GOLM2 (ENSSCAG00000012840) CTDSPL2 (ENSSCAG00000012831) EIF3J (ENSSCAG00000012816) SPG11 (ENSSCAG00000012635) CIAO2A (ENSSCAG00000012588) ADAMTS7 (ENSSCAG00000012368) MORF4L2 (ENSSCAG00000012265) Zebra finch MODERN SPECIES 1 MFAP1 (ENSTGUG00000010162) FES (ENSTGUG00000010113) MAN2A2 (ENSTGUG00000010087) UNC45A (ENSTGUG00000010052) ENSTGUG00000025741 PRC1 (ENSTGUG00000021109) VPS33B (ENSTGUG00000025670) TTLL13 (ENSTGUG00000010033) GDPGP1 (ENSTGUG00000023394) CIB1 (ENSTGUG00000010028) SEMA4B (ENSTGUG00000010009) IDH2 (ENSTGUG00000022112) ZNF710 (ENSTGUG00000026802) ENSTGUG00000026005 ENSTGUG00000029649 AP3S2 (ENSTGUG00000014282) ##22 ANPEP (ENSTGUG00000014295) ENSTGUG00000020442 ENSTGUG00000014270 ENSTGUG00000021476 ENSTGUG00000021398 ENSTGUG00000028054 ENSTGUG00000024286 RASGRF1 (ENSTGUG00000009981) CTSH (ENSTGUG00000009976) BLM (ENSTGUG00000009959) WDR76 (ENSTGUG00000009939) FRMD5 (ENSTGUG00000009926) GOLM2 (ENSTGUG00000009914) CTDSPL2 (ENSTGUG00000009887) EIF3J (ENSTGUG00000009878) Flycatcher MODERN SPECIES 1 SERINC4 (ENSFALG00000011259) HYPK (ENSFALG00000023556) FURIN (ENSFALG00000011209) ENSFALG00000011187 MAN2A2 (ENSFALG00000011174) ENSFALG00000011242 UNC45A (ENSFALG00000011163) ENSFALG00000011157 VPS33B (ENSFALG00000011098) ENSFALG00000026266 TTLL13 (ENSFALG00000011077) CIB1 (ENSFALG00000011064) SEMA4B (ENSFALG00000011052) IDH2 (ENSFALG00000011043) ZNF710 (ENSFALG00000011037) AP3S2 (ENSFALG00000011031) ##22 ANPEP (ENSFALG00000011026) ENSFALG00000011022 ENSFALG00000011013 ENSFALG00000023639 ENSFALG00000011006 ENSFALG00000011000 ENSFALG00000010981 WDR76 (ENSFALG00000010962) ENSFALG00000023463 ENSFALG00000025909 ENSFALG00000024257 GOLM2 (ENSFALG00000004951) CTDSPL2 (ENSFALG00000004970) EIF3J (ENSFALG00000004996) ENSFALG00000023704 Neognathae_c ANCESTRAL SPECIES 15 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a ENSGT00940000159819 Kakapo MODERN SPECIES 1 MFAP1 (ENSSHBG00005007378) FURIN (ENSSHBG00005007398) FES (ENSSHBG00005007427) MAN2A2 (ENSSHBG00005007460) UNC45A (ENSSHBG00005007486) ENSSHBG00005007513 PRC1 (ENSSHBG00005007544) VPS33B (ENSSHBG00005007592) HDDC3 (ENSSHBG00005007632) ENSSHBG00005007645 ENSSHBG00005007653 CIB1 (ENSSHBG00005007734) SEMA4B (ENSSHBG00005007761) IDH2 (ENSSHBG00005007782) ZNF710 (ENSSHBG00005007803) AP3S2 (ENSSHBG00005007818) ##22 ANPEP (ENSSHBG00005007852) ENSSHBG00005007919 ENSSHBG00005007929 ENSSHBG00005007935 TMED3 (ENSSHBG00005007939) ENSSHBG00005007948 RASGRF1 (ENSSHBG00005007956) CTSH (ENSSHBG00005007973) BLM (ENSSHBG00005008005) WDR76 (ENSSHBG00005008067) FRMD5 (ENSSHBG00005008084) GOLM2 (ENSSHBG00005008102) CTDSPL2 (ENSSHBG00005008122) EIF3J (ENSSHBG00005008136) SPG11 (ENSSHBG00005008168) Golden eagle MODERN SPECIES 21 MFAP1 (ENSACCG00020003062) FURIN (ENSACCG00020003041) FES (ENSACCG00020003018) MAN2A2 (ENSACCG00020002977) UNC45A (ENSACCG00020002907) ENSACCG00020002873 PRC1 (ENSACCG00020002843) VPS33B (ENSACCG00020002805) HDDC3 (ENSACCG00020002786) ENSACCG00020002759 GDPGP1 (ENSACCG00020002735) ENSACCG00020002723 SEMA4B (ENSACCG00020002698) IDH2 (ENSACCG00020002683) ZNF710 (ENSACCG00020002669) AP3S2 (ENSACCG00020002658) ##22 ANPEP (ENSACCG00020002638) ENSACCG00020002617 ENSACCG00020002606 ENSACCG00020002579 TMED3 (ENSACCG00020002558) ENSACCG00020002547 RASGRF1 (ENSACCG00020002515) CTSH (ENSACCG00020002474) BLM (ENSACCG00020002368) WDR76 (ENSACCG00020002221) FRMD5 (ENSACCG00020002198) GOLM2 (ENSACCG00020002151) CTDSPL2 (ENSACCG00020002110) EIF3J (ENSACCG00020002090) SPG11 (ENSACCG00020002012) Galloanserae ANCESTRAL SPECIES 10 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 Anatidae ANCESTRAL SPECIES 36 ENSGT00390000008502 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 Pink-footed goose MODERN SPECIES 52 SERINC4 (ENSABRG00000004460) MFAP1 (ENSABRG00000004507) FURIN (ENSABRG00000004517) FES (ENSABRG00000004539) MAN2A2 (ENSABRG00000004608) UNC45A (ENSABRG00000004685) ENSABRG00000004728 PRC1 (ENSABRG00000004796) VPS33B (ENSABRG00000004867) TTLL13 (ENSABRG00000005796) GDPGP1 (ENSABRG00000005831) ENSABRG00000005836 SEMA4B (ENSABRG00000005843) IDH2 (ENSABRG00000005863) ZNF710 (ENSABRG00000005877) AP3S2 (ENSABRG00000005881) ##22 ANPEP (ENSABRG00000005895) ENSABRG00000006916 ENSABRG00000006919 ENSABRG00000006921 TMED3 (ENSABRG00000006924) ENSABRG00000006929 RASGRF1 (ENSABRG00000006932) CTSH (ENSABRG00000006940) BLM (ENSABRG00000006971) WDR76 (ENSABRG00000007002) FRMD5 (ENSABRG00000007028) GOLM2 (ENSABRG00000007038) CTDSPL2 (ENSABRG00000007046) EIF3J (ENSABRG00000007056) SPG11 (ENSABRG00000007060) Duck MODERN SPECIES 2 MAP1A (ENSAPLG00000027744) PPIP5K1 (ENSAPLG00000010796) ENSAPLG00000010625 PDIA3 (ENSAPLG00000010321) ELL3 (ENSAPLG00000023858) FURIN (ENSAPLG00000005906) FES (ENSAPLG00000005644) UNC45A (ENSAPLG00000004720) MAN2A2 (ENSAPLG00000005234) TTLL13 (ENSAPLG00000003844) CIB1 (ENSAPLG00000010975) SEMA4B (ENSAPLG00000010610) VPS33B (ENSAPLG00000003869) IDH2 (ENSAPLG00000027640) ZNF710 (ENSAPLG00000026218) AP3S2 (ENSAPLG00000005458) ##22 ANPEP (ENSAPLG00000005574) ENSAPLG00000017865 TMED3 (ENSAPLG00000006204) ENSAPLG00000019685 ENSAPLG00000017978 RASGRF1 (ENSAPLG00000006206) CTSH (ENSAPLG00000006722) BLM (ENSAPLG00000006878) WDR76 (ENSAPLG00000007086) FRMD5 (ENSAPLG00000007330) GOLM2 (ENSAPLG00000007781) CTDSPL2 (ENSAPLG00000007949) EIF3J (ENSAPLG00000008484) SPG11 (ENSAPLG00000008622) CIAO2A (ENSAPLG00000009207) Phasianidae ANCESTRAL SPECIES 11 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00940000164520 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170.b ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT01050000244841.A.a.b ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a ENSGT00940000159819 Japanese quail MODERN SPECIES 1 SERINC4 (ENSCJPG00005000546) HYPK (ENSCJPG00005000368) MFAP1 (ENSCJPG00005000359) FURIN (ENSCJPG00005000344) MAN2A2 (ENSCJPG00005000059) UNC45A (ENSCJPG00005021161) ENSCJPG00005021160 PRC1 (ENSCJPG00005021159) HDDC3 (ENSCJPG00005021147) TTLL13 (ENSCJPG00005021146) GDPGP1 (ENSCJPG00005021145) CIB1 (ENSCJPG00005021144) SEMA4B (ENSCJPG00005021143) IDH2 (ENSCJPG00005021141) ZNF710 (ENSCJPG00005021140) AP3S2 (ENSCJPG00005021138) ##22 ENSCJPG00005021137 ENSCJPG00005021136 ENSCJPG00005021135 TMED3 (ENSCJPG00005021134) ENSCJPG00005021133 ANPEP (ENSCJPG00005021131) RASGRF1 (ENSCJPG00005021129) CTSH (ENSCJPG00005021127) BLM (ENSCJPG00005021125) WDR76 (ENSCJPG00005021123) FRMD5 (ENSCJPG00005021120) GOLM2 (ENSCJPG00005021117) CTDSPL2 (ENSCJPG00005021113) EIF3J (ENSCJPG00005021111) SPG11 (ENSCJPG00005021065) Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00690000102225 ENSGT00940000157220 ENSGT00940000158881 ENSGT01030000234638.b.b.c.a ENSGT00950000185474 ENSGT00940000159320 ENSGT00390000009453 ENSGT00940000156813 ENSGT00390000011608 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170.b ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.g ENSGT00530000063712.a.a.h ENSGT01050000244841.A.a.b ENSGT00940000159833 ENSGT00390000012355.B.a ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 Chicken MODERN SPECIES 1 MFAP1 (ENSGALG00010000059) FURIN (ENSGALG00010000058) FES (ENSGALG00010000049) MAN2A2 (ENSGALG00010000048) ENSGALG00010000057 UNC45A (ENSGALG00010000056) PRC1 (ENSGALG00010000055) VPS33B (ENSGALG00010000054) HDDC3 (ENSGALG00010000053) TTLL13 (ENSGALG00010000052) GDPGP1 (ENSGALG00010000051) CIB1 (ENSGALG00010000050) SEMA4B (ENSGALG00010020293) IDH2 (ENSGALG00010020277) ZNF710 (ENSGALG00010020257) AP3S2 (ENSGALG00010015942) ##22 ANPEP (ENSGALG00010015905) ENSGALG00010015903 MESP1 (ENSGALG00010015956) GNRHR (ENSGALG00010016446) TMED3 (ENSGALG00010016433) ENSGALG00010016421 RASGRF1 (ENSGALG00010016415) CTSH (ENSGALG00010016411) BLM (ENSGALG00010016393) WDR76 (ENSGALG00010016378) FRMD5 (ENSGALG00010016374) CASC4 (ENSGALG00010016350) CTDSPL2 (ENSGALG00010016317) EIF3J (ENSGALG00010016304) SPG11 (ENSGALG00010016262) Turkey MODERN SPECIES 3 ENSMGAG00000018525 SPG11 (ENSMGAG00000010324) EIF3J (ENSMGAG00000020198) CTDSPL2 (ENSMGAG00000010285) FRMD5 (ENSMGAG00000016494) ENSMGAG00000022869 WDR76 (ENSMGAG00000010407) ENSMGAG00000010473 ENSMGAG00000010582 ENSMGAG00000012254 ENSMGAG00000010523 ENSMGAG00000010507 ENSMGAG00000010510 ENSMGAG00000017180 ENSMGAG00000010489 ENSMGAG00000017294 ##22 ENSMGAG00000004597 ENSMGAG00000021568 ENSMGAG00000021657 SEMA4B (ENSMGAG00000010484) ENSMGAG00000010525 ENSMGAG00000020677 ENSMGAG00000010652 ENSMGAG00000010721 ENSMGAG00000010738 ENSMGAG00000010746 ENSMGAG00000010444 ENSMGAG00000010594 SERINC4 (ENSMGAG00000010567) ENSMGAG00000010563 MFAP1 (ENSMGAG00000018931) Actinopterygii ANCESTRAL SPECIES 122 ENSGT00940000159749 ENSGT00940000177011 ENSGT00390000005224 ENSGT00390000016068 ENSGT00390000015400 ENSGT00940000155645 ENSGT00940000160936 ENSGT00950000182983.B.b ENSGT00940000154146.a ENSGT00950000182940.b.a.a ENSGT00530000064251 ENSGT00530000063712.a.a.o.b ENSGT00530000063712.a.a.o.a ENSGT00940000154876.b ENSGT00390000013269 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a Neopterygii ANCESTRAL SPECIES 30 ENSGT00940000155888 ENSGT00950000183112.a ENSGT00940000160583 ENSGT00940000160523 ENSGT00940000157540.A ENSGT00940000156291 ENSGT00940000156205.h ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00530000064251 ENSGT00390000013269 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a ENSGT00940000154146.b.a ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645 ENSGT00390000015400 ENSGT00390000016068 ENSGT00390000005224 ENSGT00940000177011 ENSGT00940000159749 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000157540.A ENSGT00940000156291.f ENSGT00940000156205.h ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00530000064251 ENSGT00940000164605 ENSGT00390000013269 ENSGT01080000257410.A.f.l ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.a ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645 ENSGT00390000015400 ENSGT00390000016068 ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 Osteoglossiformes ANCESTRAL SPECIES 13 ENSGT00950000182920.a ENSGT00940000164158.B ENSGT01080000257410.A.f.m ENSGT01080000257410.A.f.l ENSGT01030000234535.F.a ENSGT00730000111392.b ENSGT00950000183112.a.a ENSGT00940000160583 ENSGT00940000157540.A.a ENSGT00940000156291.f ENSGT00940000156205.h.r.b ENSGT00940000157771 ENSGT00940000159268 ENSGT00940000156682.d ENSGT00940000164605.c ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.a ENSGT00950000182983.B.b.g ENSGT00940000160936.e ENSGT00940000155645.h ENSGT00390000015400 ENSGT00940000159749 ENSGT00940000177011 ENSGT00950000182844.b.b.b.c ENSGT00940000158927 ENSGT01030000234638.b.b.c.a ENSGT00940000158881 Asian bonytongue MODERN SPECIES 2 ENSSFOG00015019857 ENSSFOG00015019819 gnrhr4 (ENSSFOG00015019796) si:dkeyp-59c12.1 (ENSSFOG00015019777) SLCO3A1 (ENSSFOG00015019746) st8sia2 (ENSSFOG00015019731) rgma (ENSSFOG00015027403) lysmd4 (ENSSFOG00015032617) nr2f2 (ENSSFOG00015019658) MCTP2 (ENSSFOG00015019584) mef2aa (ENSSFOG00015019521) LRRC28 (ENSSFOG00015019484) ENSSFOG00015028186 ENSSFOG00015019417 ENSSFOG00015019305 ap3s2 (ENSSFOG00015026735) ##22 ANPEP (ENSSFOG00015019256) mespaa (ENSSFOG00015019242) mespba (ENSSFOG00015019234) ENSSFOG00015019172 ENSSFOG00015019161 ENSSFOG00015019124 KLHL25 (ENSSFOG00015019111) AGBL1 (ENSSFOG00015019065) NTRK3 (ENSSFOG00015019029) mrpl46 (ENSSFOG00015028871) kif7 (ENSSFOG00015018916) rhcga (ENSSFOG00015018883) cib1 (ENSSFOG00015018869) MAN2A2 (ENSSFOG00015018761) fes (ENSSFOG00015018721) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 148 pex11a (ENSPKIG00000020730) ENSPKIG00000020702 SERF2 (ENSPKIG00000020684) zgc:162879 (ENSPKIG00000020661) SEMA4B (ENSPKIG00000020599) ZNF710 (ENSPKIG00000020562) idh2 (ENSPKIG00000020516) tmed3 (ENSPKIG00000020495) si:ch211-107o10.3 (ENSPKIG00000020473) ENSPKIG00000020414 ENSPKIG00000020390 arpin (ENSPKIG00000020365) anpeplb (ENSPKIG00000020321) si:dkey-12e7.1 (ENSPKIG00000020306) ENSPKIG00000020299 ap3s2 (ENSPKIG00000020282) ##22 ANPEP (ENSPKIG00000020225) mespab (ENSPKIG00000020197) ENSPKIG00000020187 sv2ba (ENSPKIG00000020160) ENSPKIG00000020142 si:dkey-172h23.2 (ENSPKIG00000020113) KLHL25 (ENSPKIG00000020095) AGBL1 (ENSPKIG00000020051) NTRK3 (ENSPKIG00000019993) P. kingsleyae MODERN SPECIES 14 SLCO3A1 (ENSPKIG00000013050) st8sia2 (ENSPKIG00000013101) fam174b (ENSPKIG00000013141) rgma (ENSPKIG00000013169) lysmd4 (ENSPKIG00000013192) nr2f2 (ENSPKIG00000013209) ENSPKIG00000013245 ENSPKIG00000013346 LRRC28 (ENSPKIG00000013445) synm (ENSPKIG00000013517) IGF1R (ENSPKIG00000013566) ENSPKIG00000013636 AP3S2 (ENSPKIG00000013687) ##22 ANPEP (ENSPKIG00000013722) ENSPKIG00000013754 mespba (ENSPKIG00000013766) ENSPKIG00000013786 ENSPKIG00000013819 ENSPKIG00000013917 KLHL25 (ENSPKIG00000014041) AGBL1 (ENSPKIG00000014098) NTRK3 (ENSPKIG00000014190) mrpl46 (ENSPKIG00000014232) kif7 (ENSPKIG00000014300) ENSPKIG00000014399 rhcga (ENSPKIG00000014418) ENSPKIG00000014449 cib1 (ENSPKIG00000014465) Clupeocephala ANCESTRAL SPECIES 2 ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000170837 ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.i.a ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 Otomorpha DUPLICATION Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 86 ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000157182.g.a ENSGT00940000158825.d ENSGT00940000157816.a.a ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B ENSGT00940000156978 ENSGT00550000074924 Otophysi ANCESTRAL SPECIES 19 ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00940000154876.a.b.b ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00530000063712.a.a.o.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B ENSGT00940000156978 ENSGT00550000074924 Cyprinoidei ANCESTRAL SPECIES 42 ENSGT00940000175068 ENSGT00940000157405.c.a ENSGT00940000163759 ENSGT00940000159310 ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663.i ENSGT00990000209978 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B ENSGT00940000156978 ENSGT00550000074924 ENSGT00990000206020.a Cyprininae ANCESTRAL SPECIES 145 ENSGT00940000157405.c.a.b ENSGT00940000163759 ENSGT00940000159310.b ENSGT00390000014700.b.a.a.b ENSGT00390000001802.ib.b ENSGT00990000204217.a ENSGT00390000009663.i.a.b ENSGT00990000209978.b ENSGT00390000009899.a.d.p ENSGT00940000156574.C.v ENSGT00940000153377.B.d ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a.b ENSGT00940000154876.a.b.b ENSGT01100000263475.f.a.e.b.a.a.b ENSGT01100000263475.f.a.e.b.a.b.a.a.a ENSGT00530000063712.a.a.o.a.l.b ENSGT00530000063712.a.a.o.b.a.b.b ENSGT00950000182940.b.a.a.g.a.b ENSGT00940000154146.b.a.w.a ENSGT00950000182983.B.b.c ENSGT00940000160936.c ENSGT00940000155645.j.d ENSGT00390000005224.q ENSGT00940000154158.j ENSGT00520000055637.A.b.xb ENSGT00940000158707.a.b.r Goldfish DUPLICATION Goldfish MODERN SPECIES 45 ENSCARG00000041266 hipk3a (ENSCARG00000039860) tcp11l1 (ENSCARG00000039772) ENSCARG00000039756 ENSCARG00000039749 lrrc4ca (ENSCARG00000039698) ehf (ENSCARG00000039676) ric8a (ENSCARG00000039548) psmd13 (ENSCARG00000039234) cox8b (ENSCARG00000039204) gal (ENSCARG00000039166) ENSCARG00000039150 ppp6r3 (ENSCARG00000038045) lrp5 (ENSCARG00000031274) ENSCARG00000031098 ap3s2 (ENSCARG00000031020) ##22 anpepb.1 (ENSCARG00000028644) ANPEP (ENSCARG00000028590) ENSCARG00000028579 ENSCARG00000028572 ENSCARG00000028562 ENSCARG00000028556 ENSCARG00000028550 mespab (ENSCARG00000028545) mespbb (ENSCARG00000028542) ENSCARG00000028314 ENSCARG00000028286 ENSCARG00000028275 KLHL25 (ENSCARG00000028265) ENSCARG00000028236 det1 (ENSCARG00000028213) Goldfish MODERN SPECIES 2782 ap3s2 (ENSCARG00000061360) ##22 Cyprininae_a ANCESTRAL SPECIES 106 ENSGT00390000008679.e ENSGT00390000012559.j ENSGT00940000175068.a.a ENSGT00940000157405.c.a.a ENSGT00940000159310.a ENSGT00390000014700.b.a.a.a ENSGT00390000001802.ib.a ENSGT00990000204217.b ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663.i.a.a ENSGT00990000209978.a ENSGT00390000009899.a.d.o ENSGT00940000156574.C.u ENSGT00940000153377.B.c ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a.a ENSGT01100000263475.f.a.e.b.b.b ENSGT00530000063712.a.a.o.a.l.a ENSGT00530000063712.a.a.o.b.a.b.a ENSGT00950000182940.b.a.a.g.a.a ENSGT00940000154146.b.a.w.b ENSGT00950000182983.B.b.d ENSGT00940000160936.d ENSGT00940000155645.j.c ENSGT00390000005224.r ENSGT00940000154158.i ENSGT00520000055637.A.b.yb ENSGT00940000158707.a.b.q.a ENSGT00390000003374.g.a ENSGT00940000155581.B.f Golden-line barbel MODERN SPECIES 37 rag2 (ENSSGRG00000033276) ENSSGRG00000033277 lrrc4ca (ENSSGRG00000033278) ENSSGRG00000033282 ehf (ENSSGRG00000033284) ric8a (ENSSGRG00000033287) psmd13 (ENSSGRG00000033391) cox8b (ENSSGRG00000034046) ENSSGRG00000034047 zgc:110339 (ENSSGRG00000034048) gal (ENSSGRG00000034053) ENSSGRG00000034069 ppp6r3 (ENSSGRG00000034077) lrp5 (ENSSGRG00000034220) ENSSGRG00000036751 ap3s2 (ENSSGRG00000036752) ##22 anpepb.1 (ENSSGRG00000036753) mhc1lga (ENSSGRG00000036754) mespab (ENSSGRG00000036755) mespbb (ENSSGRG00000036756) ENSSGRG00000036762 ENSSGRG00000037320 ENSSGRG00000037324 KLHL25 (ENSSGRG00000037327) ENSSGRG00000037328 ntrk3a (ENSSGRG00000037329) det1 (ENSSGRG00000037339) map1lc3b (ENSSGRG00000037348) jph3b (ENSSGRG00000037416) ENSSGRG00000037423 slc7a5 (ENSSGRG00000037443) Common carp reference MODERN SPECIES 37 ENSCCRG00000012082 ENSCCRG00000056627 rag1 (ENSCCRG00000057160) rag2 (ENSCCRG00000057934) ENSCCRG00000012051 lrrc4ca (ENSCCRG00000071157) ehf (ENSCCRG00000004750) ric8a (ENSCCRG00000019044) psmd13 (ENSCCRG00000062974) ENSCCRG00000012542 zgc:110339 (ENSCCRG00000012538) gal (ENSCCRG00000012523) ENSCCRG00000012535 ppp6r3 (ENSCCRG00000010181) lrp5 (ENSCCRG00000009797) ap3s2 (ENSCCRG00000040121) ##22 anpepb.1 (ENSCCRG00000040240) anpepb.1 (ENSCCRG00000040290) ENSCCRG00000040302 ENSCCRG00000072483 mespab (ENSCCRG00000040312) ENSCCRG00000040316 ENSCCRG00000030812 mespab (ENSCCRG00000067084) mespbb (ENSCCRG00000030820) ENSCCRG00000040010 ENSCCRG00000060604 AGBL1 (ENSCCRG00000030098) KLHL25 (ENSCCRG00000071936) ntrk3a (ENSCCRG00000009333) det1 (ENSCCRG00000028334) Zebrafish MODERN SPECIES 17 rag1 (ENSDARG00000052122) rag2 (ENSDARG00000052121) ENSDARG00000089139 lrrc4ca (ENSDARG00000113411) ehf (ENSDARG00000052115) ric8a (ENSDARG00000007247) psmd13 (ENSDARG00000016239) cox8b (ENSDARG00000097209) ENSDARG00000097662 zgc:110339 (ENSDARG00000046030) gal (ENSDARG00000091377) ENSDARG00000097573 ENSDARG00000096915 ppp6r3 (ENSDARG00000013379) lrp5 (ENSDARG00000006921) ap3s2 (ENSDARG00000039882) ##22 ENSDARG00000089303 anpepb.1 (ENSDARG00000103878) ANPEP (ENSDARG00000097285) ENSDARG00000097275 ENSDARG00000051710 ENSDARG00000115781 mhc1lja (ENSDARG00000096830) ENSDARG00000097352 ENSDARG00000051711 mhc1lfa (ENSDARG00000051712) mhc1lda (ENSDARG00000023203) mhc1lla (ENSDARG00000096977) si:dkey-52p2.5 (ENSDARG00000096940) mhc1lga (ENSDARG00000051713) mhc1lia (ENSDARG00000097766) Characiphysae ANCESTRAL SPECIES ENSGT00970000193421.C.b.i.a ##22 Characiphysae_b ANCESTRAL SPECIES 174 ENSGT00940000157182.g.a.b ENSGT00940000158825.d ENSGT00940000157816.a.a ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C.x.b ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00530000063712.a.a.o.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00940000154146.b.b.a.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j Characoidei ANCESTRAL SPECIES 121 ENSGT00550000074855 ENSGT00940000156267.ob.b.b ENSGT00940000177879 ENSGT00390000001511 ENSGT00950000182939.b.b ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C.x.b ENSGT00940000153377.B ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00530000063712.a.a.o.b.b.b ENSGT00530000063712.a.a.o.b.b.a ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00940000154146.b.b.a.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j Red-bellied piranha MODERN SPECIES 293 TMCC3 (ENSPNAG00000016979) ENSPNAG00000003457 FLNC (ENSPNAG00000016883) RPL27A (ENSPNAG00000003434) ENSPNAG00000016714 psma1 (ENSPNAG00000016701) CALCB (ENSPNAG00000003427) ENSPNAG00000005141 FLNC (ENSPNAG00000016625) RPL27A (ENSPNAG00000016492) ENSPNAG00000016474 psma1 (ENSPNAG00000016466) CALCB (ENSPNAG00000016429) ENSPNAG00000016421 ENSPNAG00000016412 ap3s2 (ENSPNAG00000003415) ##22 anpepb.1 (ENSPNAG00000016377) ANPEP (ENSPNAG00000016254) ANPEP (ENSPNAG00000015483) Clupeiformes ANCESTRAL SPECIES 735 ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b Denticle herring MODERN SPECIES 17 atxn2l (ENSDCDG00000026464) sh2b1 (ENSDCDG00000026456) tubg1 (ENSDCDG00000026447) PLEKHH3 (ENSDCDG00000026439) ENSDCDG00000026425 ENSDCDG00000026197 CTTNBP2 (ENSDCDG00000026192) cftr (ENSDCDG00000017451) asz1 (ENSDCDG00000017187) wnt2 (ENSDCDG00000017184) st7 (ENSDCDG00000008761) ENSDCDG00000007488 SLCO1C1 (ENSDCDG00000007211) PDE3A (ENSDCDG00000007111) AEBP2 (ENSDCDG00000007081) ap3s2 (ENSDCDG00000006921) ##22 anpepb.1 (ENSDCDG00000006568) ANPEP (ENSDCDG00000005717) SPOP (ENSDCDG00000005661) tuba8l5 (ENSDCDG00000005648) ENSDCDG00000005636 ENSDCDG00000035377 svip (ENSDCDG00000035374) ANO5 (ENSDCDG00000035314) pkp3a (ENSDCDG00000035285) cd81b (ENSDCDG00000035277) kcnc1b (ENSDCDG00000035270) tph1a (ENSDCDG00000035083) saal1 (ENSDCDG00000035014) ENSDCDG00000034997 zgc:56106 (ENSDCDG00000034986) Otomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.b.i.b ##22 Otophysi ANCESTRAL SPECIES 19 ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00940000154876.a.b.b ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00530000063712.a.a.o.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B Cyprinoidei ANCESTRAL SPECIES 42 ENSGT00390000012559 ENSGT00940000175068 ENSGT00940000157405.c.a ENSGT00940000163759 ENSGT00940000159310 ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663.i ENSGT00990000209978 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B ENSGT00940000156978 ENSGT00550000074924 Cyprininae ANCESTRAL SPECIES 57 ENSGT00390000012559.j ENSGT00940000175068.a.a ENSGT00940000175068.b ENSGT00940000157405.c.a.a ENSGT00940000159310.a ENSGT00390000014700.b.a.a.a ENSGT00390000001802.ib.a ENSGT00990000204217.b ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663.i.a.a ENSGT00990000209978.a ENSGT00390000009899.a.d.o ENSGT00940000156574.C.u ENSGT00940000153377.B.c ENSGT00970000193421.C.b.i.b ##22 ENSGT00940000154876.a.b.a.a ENSGT01100000263475.f.a.e.b.a.a.a ENSGT01100000263475.f.a.e.b.b ENSGT00530000063712.a.a.o.a.l.a ENSGT00530000063712.a.a.o.b.a.b.a ENSGT00950000182940.b.a.a.g.a.a ENSGT00940000154146.b.a.w.b ENSGT00950000182983.B.b.d ENSGT00940000160936.d ENSGT00940000155645.j.c ENSGT00390000005224.r ENSGT00940000154158.i ENSGT00520000055637.A.b.yb ENSGT00940000158707.a.b.q.a ENSGT00390000003374.g.a Goldfish MODERN SPECIES 17 ENSCARG00000005328 CSNK2A2 (ENSCARG00000005338) ccdc113 (ENSCARG00000005366) ZNF319 (ENSCARG00000005375) ehf (ENSCARG00000005381) ric8a (ENSCARG00000005401) psmd13 (ENSCARG00000005621) cox8b (ENSCARG00000006008) ENSCARG00000006018 zgc:110339 (ENSCARG00000006022) gal (ENSCARG00000006030) ENSCARG00000006042 ppp6r3 (ENSCARG00000006093) lrp5 (ENSCARG00000006697) ENSCARG00000009758 AP3S2 (ENSCARG00000009763) ##22 anpepb.1 (ENSCARG00000009860) ENSCARG00000012615 ENSCARG00000012617 mhc1lga (ENSCARG00000012625) mespab (ENSCARG00000012629) mespbb (ENSCARG00000012632) ENSCARG00000012643 ENSCARG00000012921 KLHL25 (ENSCARG00000012939) ccnd2a (ENSCARG00000012945) tigara (ENSCARG00000012969) fgf6a (ENSCARG00000012982) zgc:77158 (ENSCARG00000012991) zgc:154077 (ENSCARG00000013000) DYRK4 (ENSCARG00000013061) Cyprininae_a ANCESTRAL SPECIES 73 ENSGT00940000157405.c.a.b ENSGT00940000163759 ENSGT00940000159310.b ENSGT00390000014700.b.a.a.b ENSGT00390000001802.ib.b ENSGT00990000204217.a ENSGT00390000009663.i.a.b ENSGT00990000209978.b ENSGT00390000009899.a.d.p ENSGT00940000156574.C.v ENSGT00940000153377.B.d ENSGT00970000193421.C.b.i.b ##22 ENSGT00940000154876.a.b.a.b ENSGT00940000154876.a.b.b ENSGT01100000263475.f.a.e.b.a.a.b ENSGT01100000263475.f.a.e.b.a.b.a.a.a ENSGT00530000063712.a.a.o.a.l.b ENSGT00530000063712.a.a.o.b.a.b.b ENSGT00950000182940.b.a.a.g.a.b ENSGT00940000154146.b.a.w.a ENSGT00950000182983.B.b.c ENSGT00940000160936.c ENSGT00940000155645.j.d ENSGT00390000005224.q ENSGT00940000154158.j ENSGT00520000055637.A.b.xb ENSGT00940000158707.a.b.r Common carp reference MODERN SPECIES 33 ENSCCRG00000068937 rag1 (ENSCCRG00000069358) rag2 (ENSCCRG00000076758) ENSCCRG00000044210 lrrc4ca (ENSCCRG00000078006) ENSCCRG00000059039 ehf (ENSCCRG00000009504) ric8a (ENSCCRG00000009508) cox8b (ENSCCRG00000009591) psmd13 (ENSCCRG00000019004) gal (ENSCCRG00000009596) ENSCCRG00000009613 ppp6r3 (ENSCCRG00000009623) lrp5 (ENSCCRG00000041247) ENSCCRG00000061403 ENSCCRG00000076136 ##22 anpepb.1 (ENSCCRG00000056750) ENSCCRG00000041833 ENSCCRG00000054038 ENSCCRG00000041751 mespab (ENSCCRG00000041730) ENSCCRG00000060820 mespbb (ENSCCRG00000077122) ENSCCRG00000030842 ENSCCRG00000037242 ENSCCRG00000018929 KLHL25 (ENSCCRG00000037663) ENSCCRG00000069030 ntrk3a (ENSCCRG00000072351) det1 (ENSCCRG00000040862) map1lc3b (ENSCCRG00000004019) Golden-line barbel MODERN SPECIES 49 rbp1.2 (ENSSGRG00000006162) rbp2b (ENSSGRG00000006166) copb2 (ENSSGRG00000006200) ENSSGRG00000007680 rem2 (ENSSGRG00000007681) carmil3 (ENSSGRG00000007688) ehf (ENSSGRG00000007691) ric8a (ENSSGRG00000007694) ENSSGRG00000007761 cox8b (ENSSGRG00000007765) zgc:110339 (ENSSGRG00000007778) ppp6r3 (ENSSGRG00000007782) lrp5 (ENSSGRG00000007819) lrp5 (ENSSGRG00000007824) ENSSGRG00000007842 AP3S2 (ENSSGRG00000007847) ##22 ANPEP (ENSSGRG00000007959) ENSSGRG00000010314 si:dkey-52p2.5 (ENSSGRG00000010317) mespab (ENSSGRG00000010319) mespbb (ENSSGRG00000010322) ENSSGRG00000010337 ENSSGRG00000010685 ENSSGRG00000010687 KLHL25 (ENSSGRG00000010690) ENSSGRG00000010691 ntrk3a (ENSSGRG00000010694) det1 (ENSSGRG00000010696) map1lc3b (ENSSGRG00000010720) ENSSGRG00000010752 ENSSGRG00000010753 Characiphysae ANCESTRAL SPECIES 44 ENSGT00940000157182.g.a.b ENSGT00940000158825.d ENSGT00940000157816.a.a ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C.x.b ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00530000063712.a.a.o.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00940000154146.b.b.a.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j ENSGT00390000005224 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.B Characiphysae_b ANCESTRAL SPECIES 174 ENSGT00940000157182.g.a.b ENSGT00940000158825.d ENSGT00940000157816.a.a ENSGT00390000014700.b.a.a ENSGT00390000001802.ib ENSGT00990000204217 ENSGT00940000161379 ENSGT00940000165046.a ENSGT00390000009663 ENSGT00940000167440 ENSGT00390000009899.a.d ENSGT00940000156574.C.x.b ENSGT00940000153377.B ENSGT00970000193421.C.b.i.b ##22 ENSGT00970000193421.C.b.i.a ##22 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00530000063712.a.a.o.b.b ENSGT00950000182940.b.a.a.g.a ENSGT00940000154146.b.b.b ENSGT00940000154146.b.b.a.b ENSGT00950000182983.B.b ENSGT00940000160936 ENSGT00940000155645.j Electric eel MODERN SPECIES 888 ENSEEEG00000018349 ENSEEEG00000018348 ap3s2 (ENSEEEG00000018344) ##22 anpepb.1 (ENSEEEG00000018339) ANPEP (ENSEEEG00000018322) ENSEEEG00000018315 ENSEEEG00000018314 SV2B (ENSEEEG00000018311) ENSEEEG00000018310 Channel catfish MODERN SPECIES 27 tmem231 (ENSIPUG00000008468) gabarapl2 (ENSIPUG00000008449) adat1 (ENSIPUG00000008416) wwp2 (ENSIPUG00000008281) FRS2 (ENSIPUG00000008229) nup160 (ENSIPUG00000008082) ENSIPUG00000008069 gal (ENSIPUG00000008049) ENSIPUG00000008036 cox8b (ENSIPUG00000008022) psmd13 (ENSIPUG00000007952) ric8a (ENSIPUG00000007920) ppp6r3 (ENSIPUG00000007824) lrp5 (ENSIPUG00000007655) ENSIPUG00000007627 ap3s2 (ENSIPUG00000007583) ##22 anpepb.1 (ENSIPUG00000007513) ENSIPUG00000007473 chmp1a (ENSIPUG00000007424) SLC10A3 (ENSIPUG00000007419) Znf276 (ENSIPUG00000007391) ENSIPUG00000007336 ENSIPUG00000007314 ENSIPUG00000007297 ENSIPUG00000007283 FLNC (ENSIPUG00000007180) rpl27a (ENSIPUG00000007135) Ric3 (ENSIPUG00000007114) psma1 (ENSIPUG00000007063) ENSIPUG00000007051 INSC (ENSIPUG00000007025) Otomorpha ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Atlantic herring MODERN SPECIES 19 utp15 (ENSCHAG00000020221) ENSCHAG00000020050 fkbp4 (ENSCHAG00000019626) ddx11 (ENSCHAG00000019582) wash1 (ENSCHAG00000019522) IQSEC3 (ENSCHAG00000019475) ENSCHAG00000019121 ENSCHAG00000019072 ENSCHAG00000019053 septin15 (ENSCHAG00000017881) ENSCHAG00000017834 ENSCHAG00000017816 ENSCHAG00000017803 ENSCHAG00000017774 ENSCHAG00000017768 ap3s2 (ENSCHAG00000017703) ##22 ANPEP (ENSCHAG00000017064) ENSCHAG00000017022 ENSCHAG00000017002 ENSCHAG00000016994 SV2B (ENSCHAG00000016734) ENSCHAG00000016722 ENSCHAG00000016661 KLHL25 (ENSCHAG00000016651) ENSCHAG00000016499 ntrk3a (ENSCHAG00000016223) det1 (ENSCHAG00000016149) map1lc3b (ENSCHAG00000016086) ENSCHAG00000016079 ENSCHAG00000016063 jph3b (ENSCHAG00000016055) Otophysi ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Characiphysae ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Characoidei ANCESTRAL SPECIES ENSGT00970000193421.C.b.j ##22 Mexicana tetra MODERN SPECIES 16 ENSAMXG00000015490 psma1 (ENSAMXG00000015455) calca (ENSAMXG00000040041) INSC (ENSAMXG00000020713) ENSAMXG00000004737 ric8a (ENSAMXG00000042873) psmd13 (ENSAMXG00000029954) cox8b (ENSAMXG00000034391) ENSAMXG00000037533 zgc:110339 (ENSAMXG00000043837) gal (ENSAMXG00000004485) ppp6r3 (ENSAMXG00000042684) lrp5 (ENSAMXG00000005136) ENSAMXG00000034325 ENSAMXG00000042631 ap3s2 (ENSAMXG00000040985) ##22 anpepb.1 (ENSAMXG00000020798) ANPEP (ENSAMXG00000038996) ENSAMXG00000031726 ENSAMXG00000030664 ENSAMXG00000040913 ENSAMXG00000038154 SV2B (ENSAMXG00000020811) ENSAMXG00000042803 ENSAMXG00000036790 ENSAMXG00000032769 ENSAMXG00000041977 KLHL25 (ENSAMXG00000025580) ENSAMXG00000038202 ENSAMXG00000036244 NTRK3 (ENSAMXG00000012174) Euteleosteomorpha ANCESTRAL SPECIES 3 ENSGT00940000160227.h ENSGT00940000157599.c.b ENSGT00940000165857.a ENSGT00940000159833 ENSGT00390000012547.a.f.a ENSGT00940000161170.c ENSGT00940000154870.D.a.b ENSGT00390000009995 ENSGT01050000244841.A.a.b.qb.a ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e ENSGT00940000156205.g ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b ENSGT00940000157600 ENSGT00390000015857 ENSGT00390000015893 ENSGT00950000182971.A Acanthomorphata ANCESTRAL SPECIES 216 ENSGT01050000244841.A.a.b.qb.a.b ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e ENSGT00940000156205.g ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 Cod MODERN SPECIES 5 gpatch1 (ENSGMOG00000003830) WDR88 (ENSGMOG00000003899) lrp3 (ENSGMOG00000025245) slc7a10a (ENSGMOG00000026425) ENSGMOG00000025742 rhpn2 (ENSGMOG00000013243) cep89 (ENSGMOG00000034662) zgc:165481 (ENSGMOG00000031211) ENSGMOG00000000879 ENSGMOG00000000886 ENSGMOG00000014531 ENSGMOG00000018626 ENSGMOG00000024090 ENSGMOG00000000175 igf1rb (ENSGMOG00000000181) ENSGMOG00000024300 ##22 ENSGMOG00000026325 ENSGMOG00000000197 mespab (ENSGMOG00000034929) mespba (ENSGMOG00000022758) ENSGMOG00000027518 ENSGMOG00000025824 ENSGMOG00000004099 ENSGMOG00000007572 ENSGMOG00000015297 PHKA2 (ENSGMOG00000008203) ppef1 (ENSGMOG00000008211) ENSGMOG00000008214 cdkl5 (ENSGMOG00000008216) ENSGMOG00000008222 ENSGMOG00000008230 Euacanthomorphacea ANCESTRAL SPECIES 29 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 Pinecone sodierfish MODERN SPECIES 17 tm2d3 (ENSMMDG00005020489) ENSMMDG00005015544 ulk3 (ENSMMDG00005015450) ENSMMDG00005015447 cplx3a (ENSMMDG00005015444) CSK (ENSMMDG00005014956) cyp1a (ENSMMDG00005014947) ENSMMDG00005014945 ENSMMDG00005014943 ENSMMDG00005014938 fam219b (ENSMMDG00005014937) ENSMMDG00005014935 SNAP25 (ENSMMDG00005014934) LRRC28 (ENSMMDG00005014931) igf1rb (ENSMMDG00005005409) ap3s2 (ENSMMDG00005005197) ##22 ANPEP (ENSMMDG00005005190) ANPEP (ENSMMDG00005004100) mespaa (ENSMMDG00005004023) mespba (ENSMMDG00005004019) sv2ba (ENSMMDG00005003854) ENSMMDG00005003827 ENSMMDG00005003820 ENSMMDG00005003815 ENSMMDG00005003808 NTRK3 (ENSMMDG00005003805) ENSMMDG00005003799 mrpl46 (ENSMMDG00005003798) mrps11 (ENSMMDG00005003796) PDPR (ENSMMDG00005003044) SLC7A9 (ENSMMDG00005002915) Percomorphaceae ANCESTRAL SPECIES 27 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Tiger tail seahorse MODERN SPECIES 132 adgrg1 (ENSHCOG00000001699) slc7a6 (ENSHCOG00000001686) slc7a6os (ENSHCOG00000001674) TDP1 (ENSHCOG00000001664) eprs1 (ENSHCOG00000001640) GLO1 (ENSHCOG00000001600) HMBOX1 (ENSHCOG00000001589) HMBOX1 (ENSHCOG00000001578) KIF13B (ENSHCOG00000001559) ENSHCOG00000001544 ENSHCOG00000001532 COX5A (ENSHCOG00000001525) SNAP25 (ENSHCOG00000001519) LRRC28 (ENSHCOG00000001509) igf1rb (ENSHCOG00000001494) ap3s2 (ENSHCOG00000001465) ##22 ANPEP (ENSHCOG00000001459) ENSHCOG00000001448 mespba (ENSHCOG00000001441) sv2ba (ENSHCOG00000001419) ENSHCOG00000001377 ENSHCOG00000001367 NTRK3 (ENSHCOG00000000048) mrpl46 (ENSHCOG00000001350) mrps11 (ENSHCOG00000001347) PDPR (ENSHCOG00000001341) ENSHCOG00000001332 ENSHCOG00000001326 ENSHCOG00000001317 ENSHCOG00000001313 ENSHCOG00000001308 Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Pomacentridae ANCESTRAL SPECIES 79 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a Pomacentridae_A ANCESTRAL SPECIES 78 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a Amphiprion ANCESTRAL SPECIES 111 ENSGT00940000155356.d.b.b.b.a.c.a.a.b ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT01030000234589.g.a.e.a.c.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.b.b.a ENSGT01030000234589.g.a.e.a.c.a Clown anemonefish MODERN SPECIES 3229 mntb (ENSAOCG00000015999) septin4a (ENSAOCG00000015851) LIMK1 (ENSAOCG00000015226) mrps17 (ENSAOCG00000015138) ENSAOCG00000015123 cct6a (ENSAOCG00000015067) ENSAOCG00000015025 ENSAOCG00000001047 ENSAOCG00000001819 fam219b (ENSAOCG00000001040) ENSAOCG00000014924 SNAP25 (ENSAOCG00000001031) ENSAOCG00000014881 LRRC28 (ENSAOCG00000014863) igf1rb (ENSAOCG00000014811) ap3s2 (ENSAOCG00000014732) ##22 ANPEP (ENSAOCG00000014707) ANPEP (ENSAOCG00000014657) mespaa (ENSAOCG00000014575) mespba (ENSAOCG00000014528) sv2ba (ENSAOCG00000014489) ENSAOCG00000014263 ENSAOCG00000014234 ENSAOCG00000014223 NTRK3 (ENSAOCG00000014175) mrpl46 (ENSAOCG00000014108) mrps11 (ENSAOCG00000000916) PDPR (ENSAOCG00000000909) ENSAOCG00000014018 ENSAOCG00000013993 ENSAOCG00000013974 Orange clownfish MODERN SPECIES ENSAPEG00000007963 ulk3 (ENSAPEG00000007933) ENSAPEG00000007911 cplx3a (ENSAPEG00000007902) CSK (ENSAPEG00000007853) edc3 (ENSAPEG00000007841) cyp1a (ENSAPEG00000007811) ENSAPEG00000007782 ENSAPEG00000007760 ENSAPEG00000007734 fam219b (ENSAPEG00000007693) ENSAPEG00000007680 SNAP25 (ENSAPEG00000007644) LRRC28 (ENSAPEG00000007582) igf1rb (ENSAPEG00000007516) ap3s2 (ENSAPEG00000007481) ##22 ANPEP (ENSAPEG00000007197) ENSAPEG00000007158 ANPEP (ENSAPEG00000007047) mespaa (ENSAPEG00000006989) mespba (ENSAPEG00000006955) sv2ba (ENSAPEG00000006939) ENSAPEG00000006914 ENSAPEG00000006740 NTRK3 (ENSAPEG00000006663) mrpl46 (ENSAPEG00000006612) mrps11 (ENSAPEG00000006598) PDPR (ENSAPEG00000006486) ENSAPEG00000006468 ENSAPEG00000006448 ENSAPEG00000006403 Spiny chromis MODERN SPECIES 866 ENSAPOG00000005721 igf1rb (ENSAPOG00000005700) ap3s2 (ENSAPOG00000005579) ##22 ANPEP (ENSAPOG00000005536) ANPEP (ENSAPOG00000005421) mespaa (ENSAPOG00000005398) mespba (ENSAPOG00000005378) sv2ba (ENSAPOG00000005314) ENSAPOG00000005037 ENSAPOG00000005015 ENSAPOG00000005007 ENSAPOG00000004994 Bicolor damselfish MODERN SPECIES 613 LRRC28 (ENSSPAG00000007126) igf1rb (ENSSPAG00000007089) ap3s2 (ENSSPAG00000007064) ##22 ANPEP (ENSSPAG00000007043) ANPEP (ENSSPAG00000007005) mespaa (ENSSPAG00000006988) mespba (ENSSPAG00000006971) sv2ba (ENSSPAG00000006939) ENSSPAG00000006928 ENSSPAG00000006914 ENSSPAG00000006882 ENSSPAG00000006865 Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Midas cichlid MODERN SPECIES 109 ENSACIG00000005276 cplx3a (ENSACIG00000005284) CSK (ENSACIG00000005315) edc3 (ENSACIG00000005330) cyp1a (ENSACIG00000005416) ENSACIG00000006809 ENSACIG00000006828 ENSACIG00000006859 ENSACIG00000006888 fam219b (ENSACIG00000006913) COX5A (ENSACIG00000006936) SNAP25 (ENSACIG00000006954) LRRC28 (ENSACIG00000006973) igf1rb (ENSACIG00000007009) ENSACIG00000007062 ap3s2 (ENSACIG00000007071) ##22 ANPEP (ENSACIG00000007083) ANPEP (ENSACIG00000007161) mespaa (ENSACIG00000007411) mespba (ENSACIG00000007425) sv2ba (ENSACIG00000007439) ENSACIG00000007473 ENSACIG00000007493 NTRK3 (ENSACIG00000007582) mrpl46 (ENSACIG00000007620) mrps11 (ENSACIG00000007679) PDPR (ENSACIG00000007693) ENSACIG00000007729 ENSACIG00000007733 ENSACIG00000007745 hmbox1a (ENSACIG00000007797) Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b.o.a ENSGT00940000158358.b.o.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Nile tilapia MODERN SPECIES ENSONIG00000002904 ulk3 (ENSONIG00000002912) ENSONIG00000002918 cplx3 (ENSONIG00000029793) CSK (ENSONIG00000002920) edc3 (ENSONIG00000002932) cyp1a (ENSONIG00000041126) ENSONIG00000041695 ENSONIG00000042922 ENSONIG00000042687 ENSONIG00000002949 cox5aa (ENSONIG00000002953) SNAP25 (ENSONIG00000002954) LRRC28 (ENSONIG00000002957) igf1rb (ENSONIG00000002961) AP3S2 (ENSONIG00000035244) ##22 ANPEP (ENSONIG00000002978) ANPEP (ENSONIG00000002988) mespaa (ENSONIG00000038969) mespba (ENSONIG00000028668) sv2ba (ENSONIG00000002992) ENSONIG00000003000 NTRK3 (ENSONIG00000003007) ENSONIG00000032719 mrpl46 (ENSONIG00000027702) mrps11 (ENSONIG00000034606) PDPR (ENSONIG00000003019) ENSONIG00000036476 KIF13B (ENSONIG00000003026) hmbox1a (ENSONIG00000003040) TDP1 (ENSONIG00000003045) Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b.o.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Lyretail cichlid MODERN SPECIES 290 ENSNBRG00000008049 ulk3 (ENSNBRG00000007987) ENSNBRG00000007970 cplx3a (ENSNBRG00000007964) CSK (ENSNBRG00000007926) edc3 (ENSNBRG00000007881) cyp1a (ENSNBRG00000007864) ENSNBRG00000007845 ENSNBRG00000007832 ENSNBRG00000007785 fam219b (ENSNBRG00000007775) cox5aa (ENSNBRG00000007764) SNAP25 (ENSNBRG00000007751) ENSNBRG00000007743 igf1rb (ENSNBRG00000007674) ap3s2 (ENSNBRG00000007647) ##22 ANPEP (ENSNBRG00000007204) ANPEP (ENSNBRG00000007061) mespaa (ENSNBRG00000007037) mespba (ENSNBRG00000007019) sv2ba (ENSNBRG00000006848) ENSNBRG00000006808 ENSNBRG00000006659 NTRK3 (ENSNBRG00000006614) mrpl46 (ENSNBRG00000006597) mrps11 (ENSNBRG00000006581) PDPR (ENSNBRG00000006515) ENSNBRG00000006494 ENSNBRG00000006471 KIF13B (ENSNBRG00000006223) hmbox1a (ENSNBRG00000006168) Haplochromini ANCESTRAL SPECIES 11 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b.p ENSGT00940000158358.b.o.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Burton s mouthbrooder MODERN SPECIES 272 ulk3 (ENSHBUG00000020921) ENSHBUG00000020912 cplx3a (ENSHBUG00000020901) CSK (ENSHBUG00000020879) edc3 (ENSHBUG00000020817) cyp1a (ENSHBUG00000020804) ENSHBUG00000020795 ENSHBUG00000020784 ENSHBUG00000020756 ENSHBUG00000020662 fam219b (ENSHBUG00000000774) cox5aa (ENSHBUG00000020595) SNAP25 (ENSHBUG00000020586) LRRC28 (ENSHBUG00000020556) igf1rb (ENSHBUG00000020501) ap3s2 (ENSHBUG00000020370) ##22 ANPEP (ENSHBUG00000020312) ANPEP (ENSHBUG00000020203) mespaa (ENSHBUG00000020178) mespba (ENSHBUG00000020166) sv2ba (ENSHBUG00000020149) ENSHBUG00000020054 ENSHBUG00000019973 NTRK3 (ENSHBUG00000019944) mrpl46 (ENSHBUG00000019818) mrps11 (ENSHBUG00000019804) PDPR (ENSHBUG00000019777) ENSHBUG00000019705 KIF13B (ENSHBUG00000019693) hmbox1a (ENSHBUG00000019655) TDP1 (ENSHBUG00000019614) Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b.p ENSGT00940000158358.b.o.a ENSGT00940000158358.b.o.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000160789.D.b.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a P. nyererei MODERN SPECIES 320 ulk3 (ENSPNYG00000009745) ENSPNYG00000009730 cplx3a (ENSPNYG00000009724) CSK (ENSPNYG00000009686) edc3 (ENSPNYG00000009669) cyp1a (ENSPNYG00000009659) ENSPNYG00000009641 ENSPNYG00000009620 ENSPNYG00000009587 ENSPNYG00000009560 fam219b (ENSPNYG00000009543) cox5aa (ENSPNYG00000009523) SNAP25 (ENSPNYG00000009503) LRRC28 (ENSPNYG00000009471) igf1rb (ENSPNYG00000009411) ap3s2 (ENSPNYG00000009379) ##22 ANPEP (ENSPNYG00000009033) ANPEP (ENSPNYG00000008900) mespaa (ENSPNYG00000008885) mespba (ENSPNYG00000008860) sv2ba (ENSPNYG00000008670) ENSPNYG00000008614 ENSPNYG00000008515 ENSPNYG00000008492 NTRK3 (ENSPNYG00000008457) mrpl46 (ENSPNYG00000008444) mrps11 (ENSPNYG00000008428) PDPR (ENSPNYG00000008380) ENSPNYG00000008354 ENSPNYG00000008291 KIF13B (ENSPNYG00000008080) Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b.p ENSGT00940000158358.b.o.a ENSGT00940000158358.b.o.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000160789.D.b.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a Eastern happy MODERN SPECIES cplx3a (ENSACLG00000018695) CSK (ENSACLG00000018710) edc3 (ENSACLG00000018776) cyp1a (ENSACLG00000018791) ENSACLG00000018838 ENSACLG00000018843 ENSACLG00000018849 ENSACLG00000018905 ENSACLG00000018954 ENSACLG00000018973 fam219b (ENSACLG00000019012) cox5aa (ENSACLG00000019070) SNAP25 (ENSACLG00000019266) LRRC28 (ENSACLG00000019309) igf1rb (ENSACLG00000019368) ap3s2 (ENSACLG00000019469) ##22 ANPEP (ENSACLG00000019501) ANPEP (ENSACLG00000019551) mespaa (ENSACLG00000019590) mespba (ENSACLG00000019604) sv2ba (ENSACLG00000019613) ENSACLG00000019669 ENSACLG00000019721 ENSACLG00000019740 NTRK3 (ENSACLG00000019754) ENSACLG00000019849 ENSACLG00000019876 mrpl46 (ENSACLG00000019884) ENSACLG00000019896 mrps11 (ENSACLG00000019910) PDPR (ENSACLG00000019932) Zebra mbuna MODERN SPECIES 1091 cplx3a (ENSMZEG00005005699) CSK (ENSMZEG00005005671) edc3 (ENSMZEG00005005654) cyp1a (ENSMZEG00005005645) ENSMZEG00005005633 ENSMZEG00005005625 ENSMZEG00005005619 ENSMZEG00005005614 ENSMZEG00005005603 ENSMZEG00005005588 fam219b (ENSMZEG00005005569) cox5aa (ENSMZEG00005005551) SNAP25 (ENSMZEG00005005539) LRRC28 (ENSMZEG00005005532) igf1rb (ENSMZEG00005005511) ap3s2 (ENSMZEG00005005493) ##22 ANPEP (ENSMZEG00005005456) ANPEP (ENSMZEG00005005427) mespaa (ENSMZEG00005005402) mespba (ENSMZEG00005005392) sv2ba (ENSMZEG00005005328) ENSMZEG00005005313 ENSMZEG00005005234 ENSMZEG00005005212 NTRK3 (ENSMZEG00005005176) mrpl46 (ENSMZEG00005005163) mrps11 (ENSMZEG00005005157) PDPR (ENSMZEG00005005109) ENSMZEG00005005097 ENSMZEG00005005091 KIF13B (ENSMZEG00005005077) Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000154146.b.a.n ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.n ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Aplocheiloidei ANCESTRAL SPECIES 40 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a.f ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 ENSGT00390000009312.b Mangrove rivulus MODERN SPECIES 114 ulk3 (ENSKMAG00000001839) ENSKMAG00000001857 cplx3a (ENSKMAG00000001870) CSK (ENSKMAG00000001906) edc3 (ENSKMAG00000001987) cyp1a (ENSKMAG00000002016) ENSKMAG00000002117 ENSKMAG00000002160 ENSKMAG00000002176 ENSKMAG00000002197 fam219b (ENSKMAG00000002212) cox5aa (ENSKMAG00000002227) SNAP25 (ENSKMAG00000002256) LRRC28 (ENSKMAG00000002452) igf1rb (ENSKMAG00000002516) ap3s2 (ENSKMAG00000002638) ##22 ANPEP (ENSKMAG00000002677) ANPEP (ENSKMAG00000002685) mespaa (ENSKMAG00000002708) ENSKMAG00000002714 sv2ba (ENSKMAG00000002732) ENSKMAG00000002769 Turquoise killifish MODERN SPECIES 376 ENSNFUG00015016457 ENSNFUG00015016465 ap3s2 (ENSNFUG00015016473) ##22 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00940000154969.a ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00940000159833 ENSGT00940000165857.a ENSGT00940000157599.c.b ENSGT00510000048144 ENSGT00940000156346.d ENSGT00940000156346.c.a ENSGT00940000166058 ENSGT00940000158534.a.a ENSGT00390000015600.c.a ENSGT00940000154470.b ENSGT00940000154954.nb.b Poeciliinae ANCESTRAL SPECIES 13 ENSGT00940000154969.a ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00940000159833 ENSGT00940000165857.a ENSGT00940000157599.c.b ENSGT00510000048144 ENSGT00940000156346.d ENSGT00940000156346.c.a ENSGT00940000166058 ENSGT00940000158534.a.a ENSGT00390000015600.c.a ENSGT00940000172895 ENSGT00940000154954.nb.b Poecilia ANCESTRAL SPECIES 4 ENSGT00940000154969.a ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00940000159833 ENSGT00940000165857.a ENSGT00940000157599.c.b ENSGT00510000048144 ENSGT00940000156346.d ENSGT00940000156346.c.a ENSGT00940000166058 ENSGT00940000158534.a.a ENSGT00390000015600.c.a ENSGT00940000172895 ENSGT00940000154954.nb.b NAME_6 ANCESTRAL SPECIES 39 ENSGT00940000154969.a ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00940000159833 ENSGT00940000165857.a ENSGT00940000157599.c.b ENSGT00510000048144 ENSGT00940000156346.c.a ENSGT00940000166058 ENSGT00940000158534.a.a ENSGT00390000015600.c.a ENSGT00940000172895 ENSGT00940000154954.nb.b ENSGT00940000156932.a Sailfin molly MODERN SPECIES 366 ENSPLAG00000008057 ENSPLAG00000008047 ENSPLAG00000008030 fam219b (ENSPLAG00000008020) cox5aa (ENSPLAG00000008007) SNAP25 (ENSPLAG00000007981) LRRC28 (ENSPLAG00000007958) igf1rb (ENSPLAG00000007907) ap3s2 (ENSPLAG00000007826) ##22 ANPEP (ENSPLAG00000007800) ANPEP (ENSPLAG00000007781) ANPEP (ENSPLAG00000007726) mespba (ENSPLAG00000007254) Amazon molly MODERN SPECIES 488 CSK (ENSPFOG00000015095) CSK (ENSPFOG00000015195) cyp1a (ENSPFOG00000015284) ENSPFOG00000015326 ENSPFOG00000015375 ENSPFOG00000015380 ENSPFOG00000015407 fam219b (ENSPFOG00000015439) COX5A (ENSPFOG00000015470) SNAP25 (ENSPFOG00000015494) LRRC28 (ENSPFOG00000015513) igf1rb (ENSPFOG00000015585) ap3s2 (ENSPFOG00000015829) ##22 ANPEP (ENSPFOG00000015846) ANPEP (ENSPFOG00000015921) mespaa (ENSPFOG00000015959) mespba (ENSPFOG00000015962) tmed3 (ENSPFOG00000015967) si:ch211-107o10.3 (ENSPFOG00000015972) RASGRF1 (ENSPFOG00000016006) wdr76 (ENSPFOG00000016083) FRMD5 (ENSPFOG00000016129) cry5 (ENSPFOG00000016246) ENSPFOG00000016272 sec11a (ENSPFOG00000016298) tspan3b (ENSPFOG00000016313) pstpip1b (ENSPFOG00000016341) ISL2 (ENSPFOG00000016399) Guppy MODERN SPECIES 455 ENSPREG00000008101 ulk3 (ENSPREG00000008190) ENSPREG00000008248 cplx3a (ENSPREG00000008261) CSK (ENSPREG00000008273) cyp1a (ENSPREG00000008287) ENSPREG00000008308 ENSPREG00000008321 ENSPREG00000008336 ENSPREG00000008368 fam219b (ENSPREG00000008392) COX5A (ENSPREG00000008401) SNAP25 (ENSPREG00000008416) LRRC28 (ENSPREG00000008444) igf1rb (ENSPREG00000008541) ap3s2 (ENSPREG00000008669) ##22 ANPEP (ENSPREG00000008721) ANPEP (ENSPREG00000008931) mespaa (ENSPREG00000008972) tmed3 (ENSPREG00000008984) tmed3 (ENSPREG00000009006) si:ch211-107o10.3 (ENSPREG00000009017) RASGRF1 (ENSPREG00000009047) wdr76 (ENSPREG00000009123) ENSPREG00000009156 ENSPREG00000009169 cry5 (ENSPREG00000009207) ENSPREG00000009259 sec11a (ENSPREG00000009290) ENSPREG00000009311 ENSPREG00000009331 Platyfish MODERN SPECIES 18 tm2d3 (ENSXMAG00000022710) ENSXMAG00000016645 ulk3 (ENSXMAG00000016706) ENSXMAG00000016729 cplx3a (ENSXMAG00000026598) CSK (ENSXMAG00000016732) cyp1a (ENSXMAG00000016761) ENSXMAG00000016783 ENSXMAG00000021603 ENSXMAG00000016801 fam219b (ENSXMAG00000016809) cox5aa (ENSXMAG00000029675) SNAP25 (ENSXMAG00000027012) LRRC28 (ENSXMAG00000016831) igf1rb (ENSXMAG00000016851) ap3s2 (ENSXMAG00000027626) ##22 ANPEP (ENSXMAG00000016913) ANPEP (ENSXMAG00000016971) ENSXMAG00000021810 mespba (ENSXMAG00000016981) tmed3 (ENSXMAG00000016983) si:ch211-107o10.3 (ENSXMAG00000016987) RASGRF1 (ENSXMAG00000017009) wdr76 (ENSXMAG00000017055) FRMD5 (ENSXMAG00000017063) ENSXMAG00000024903 cry5 (ENSXMAG00000017096) ENSXMAG00000017127 sec11a (ENSXMAG00000017133) ENSXMAG00000026482 tspan3b (ENSXMAG00000017147) NAME_4 ANCESTRAL SPECIES 135 ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00940000159833 ENSGT00940000165857.a ENSGT00940000157599.c.b ENSGT00510000048144 ENSGT00940000156346.c.a ENSGT00940000166058 ENSGT00940000158534.a.a ENSGT00390000015600.c.a ENSGT00940000154470.b ENSGT00940000154954.nb.b ENSGT00940000156932.a Mummichog MODERN SPECIES 2254 cry5 (ENSFHEG00000012143) FRMD5 (ENSFHEG00000012083) wdr76 (ENSFHEG00000012046) RASGRF1 (ENSFHEG00000012032) si:ch211-107o10.3 (ENSFHEG00000011955) tmed3 (ENSFHEG00000011912) ENSFHEG00000011882 ENSFHEG00000011875 ENSFHEG00000011869 ENSFHEG00000011856 fam219b (ENSFHEG00000011847) cox5aa (ENSFHEG00000011837) SNAP25 (ENSFHEG00000011797) LRRC28 (ENSFHEG00000011419) igf1rb (ENSFHEG00000011372) ap3s2 (ENSFHEG00000011261) ##22 ANPEP (ENSFHEG00000011236) ANPEP (ENSFHEG00000011190) mespaa (ENSFHEG00000010531) mespba (ENSFHEG00000010516) cyp1a (ENSFHEG00000010510) cplx3a (ENSFHEG00000010469) ENSFHEG00000010464 ulk3 (ENSFHEG00000010446) ENSFHEG00000010406 larp6a (ENSFHEG00000010312) ENSFHEG00000010288 THSD4 (ENSFHEG00000010235) pepd (ENSFHEG00000010186) CHST8 (ENSFHEG00000010137) KCTD15 (ENSFHEG00000010118) Sheepshead minnow MODERN SPECIES 1709 ap3s2 (ENSCVAG00000016800) ##22 ANPEP (ENSCVAG00000016780) ANPEP (ENSCVAG00000016768) Oryzias ANCESTRAL SPECIES 13 ENSGT00940000156205.g ENSGT00940000156291.e ENSGT00940000157540.B ENSGT01080000257410.A.f.l ENSGT00940000161051.a.b ENSGT01050000244841.A.a.b.qb.a.b ENSGT00390000009312.b ENSGT00550000074815 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Oryzias_b ANCESTRAL SPECIES 5 ENSGT00940000157540.B ENSGT01080000257410.A.f.l ENSGT00940000161051.a.b.t.a.a ENSGT00940000161051.a.b.t.a.b.a ENSGT00940000161051.a.b.t.a.b.b ENSGT01050000244841.A.a.b.qb.a.b ENSGT00390000009312.b ENSGT00550000074815 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Indian medaka MODERN SPECIES 26 ENSOMEG00000019122 SLCO3A1 (ENSOMEG00000019098) ENSOMEG00000019064 ENSOMEG00000019048 ENSOMEG00000019040 ENSOMEG00000019022 GLO1 (ENSOMEG00000019001) eprs1 (ENSOMEG00000018971) ENSOMEG00000018829 ENSOMEG00000018729 fam219b (ENSOMEG00000018688) cox5aa (ENSOMEG00000018663) SNAP25 (ENSOMEG00000018629) LRRC28 (ENSOMEG00000018559) igf1rb (ENSOMEG00000018503) ap3s2 (ENSOMEG00000018433) ##22 ANPEP (ENSOMEG00000018311) ANPEP (ENSOMEG00000018403) ENSOMEG00000018285 mespaa (ENSOMEG00000018266) mespba (ENSOMEG00000018258) sv2ba (ENSOMEG00000018247) ENSOMEG00000018205 ENSOMEG00000018188 NTRK3 (ENSOMEG00000018088) mrpl46 (ENSOMEG00000017928) mrps11 (ENSOMEG00000017915) PDPR (ENSOMEG00000017900) ENSOMEG00000017846 KIF13B (ENSOMEG00000017789) hmbox1a (ENSOMEG00000017612) Javanese ricefish MODERN SPECIES 17 ENSOJAG00000017189 ENSOJAG00000017184 ENSOJAG00000017178 ENSOJAG00000017174 gnrhr2 (ENSOJAG00000017157) GLO1 (ENSOJAG00000017126) eprs1 (ENSOJAG00000015175) ENSOJAG00000015142 ENSOJAG00000015113 ENSOJAG00000015099 fam219b (ENSOJAG00000015091) cox5aa (ENSOJAG00000014985) SNAP25 (ENSOJAG00000014961) LRRC28 (ENSOJAG00000014937) igf1rb (ENSOJAG00000012573) ap3s2 (ENSOJAG00000012478) ##22 ANPEP (ENSOJAG00000012314) snrpa1 (ENSOJAG00000012259) mespaa (ENSOJAG00000012083) mespba (ENSOJAG00000012066) sv2ba (ENSOJAG00000012014) ENSOJAG00000011927 ENSOJAG00000011913 NTRK3 (ENSOJAG00000011726) ENSOJAG00000011688 mrpl46 (ENSOJAG00000011679) mrps11 (ENSOJAG00000011671) PDPR (ENSOJAG00000011318) ENSOJAG00000011281 KIF13B (ENSOJAG00000008918) hmbox1a (ENSOJAG00000008848) Oryzias_a ANCESTRAL SPECIES 6 ENSGT00940000159578 ENSGT00940000156205.g ENSGT00940000156291.e ENSGT00940000157540.B ENSGT01080000257410.A.f.l ENSGT01050000244841.A.a.b.qb.a.b ENSGT00390000009312.b ENSGT00550000074815 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 Chinese medaka MODERN SPECIES 901 ENSOSIG00000019840 fam219b (ENSOSIG00000019845) cox5aa (ENSOSIG00000019853) SNAP25 (ENSOSIG00000019892) LRRC28 (ENSOSIG00000019896) igf1rb (ENSOSIG00000020109) ENSOSIG00000022435 ap3s2 (ENSOSIG00000022438) ##22 ANPEP (ENSOSIG00000022464) mespaa (ENSOSIG00000022481) mespba (ENSOSIG00000022483) sv2ba (ENSOSIG00000022513) ENSOSIG00000022538 ENSOSIG00000022540 NTRK3 (ENSOSIG00000022542) ENSOSIG00000022544 mrpl46 (ENSOSIG00000022545) mrps11 (ENSOSIG00000022548) PDPR (ENSOSIG00000022555) ENSOSIG00000022560 KIF13B (ENSOSIG00000022594) hmbox1a (ENSOSIG00000022716) TDP1 (ENSOSIG00000022738) Japanese Medaka HdrR MODERN SPECIES 17 hce (ENSORLG00000014846) ENSORLG00000014873 ENSORLG00000014863 ENSORLG00000014853 gnrh-r1 (ENSORLG00000019213) GLO1 (ENSORLG00000014841) eprs1 (ENSORLG00000014819) ENSORLG00000025005 ENSORLG00000014777 ENSORLG00000014769 fam219b (ENSORLG00000028616) COX5A (ENSORLG00000014758) ENSORLG00000024677 LRRC28 (ENSORLG00000014753) igf1rb (ENSORLG00000014732) ap3s2 (ENSORLG00000014699) ##22 ENSORLG00000014691 ENSORLG00000029229 mespaa (ENSORLG00000014659) mespba (ENSORLG00000014656) sv2ba (ENSORLG00000014648) ENSORLG00000028055 ENSORLG00000014616 NTRK3 (ENSORLG00000014606) mrpl46 (ENSORLG00000014585) mrps11 (ENSORLG00000014573) PDPR (ENSORLG00000014564) ENSORLG00000014513 ENSORLG00000014507 hmbox1a (ENSORLG00000014467) TDP1 (ENSORLG00000014455) Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Eupercaria ANCESTRAL SPECIES 14 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Ballan wrasse MODERN SPECIES 929 ap3s2 (ENSLBEG00000008117) ##22 ANPEP (ENSLBEG00000007647) ANPEP (ENSLBEG00000007049) ENSLBEG00000006884 ENSLBEG00000006856 sv2ba (ENSLBEG00000006657) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Perciformes ANCESTRAL SPECIES 15 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Cottioidei ANCESTRAL SPECIES 35 ENSGT00940000154969.a ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Stickleback MODERN SPECIES 1 larp6a (ENSGACG00000014622) tm2d3 (ENSGACG00000014624) ENSGACG00000014631 ulk3 (ENSGACG00000014651) cplx3a (ENSGACG00000014657) CSK (ENSGACG00000014659) edc3 (ENSGACG00000014671) cyp1a (ENSGACG00000014674) ENSGACG00000014688 ENSGACG00000014694 ENSGACG00000014696 COX5A (ENSGACG00000014702) SNAP25 (ENSGACG00000014706) LRRC28 (ENSGACG00000014725) igf1rb (ENSGACG00000014729) ap3s2 (ENSGACG00000014734) ##22 ANPEP (ENSGACG00000014748) mespaa (ENSGACG00000014761) sv2ba (ENSGACG00000014764) ENSGACG00000014778 NTRK3 (ENSGACG00000014782) mrpl46 (ENSGACG00000014786) mrps11 (ENSGACG00000014791) PDPR (ENSGACG00000014795) ENSGACG00000014805 KIF13B (ENSGACG00000014807) hmbox1a (ENSGACG00000014814) ENSGACG00000014815 eprs1 (ENSGACG00000014823) GLO1 (ENSGACG00000014828) gnrhr2 (ENSGACG00000014832) Lumpfish MODERN SPECIES 18 tm2d3 (ENSCLMG00005000762) ENSCLMG00005000759 ulk3 (ENSCLMG00005000751) ENSCLMG00005000749 cplx3a (ENSCLMG00005000747) CSK (ENSCLMG00005000057) EDC3 (ENSCLMG00005000006) cyp1a (ENSCLMG00005022023) ENSCLMG00005022020 ENSCLMG00005022018 fam219b (ENSCLMG00005022017) COX5A (ENSCLMG00005022016) SNAP25 (ENSCLMG00005022015) LRRC28 (ENSCLMG00005022011) igf1rb (ENSCLMG00005020609) AP3S2 (ENSCLMG00005020579) ##22 ANPEP (ENSCLMG00005020525) ANPEP (ENSCLMG00005019880) mespaa (ENSCLMG00005019833) mespba (ENSCLMG00005019831) sv2ba (ENSCLMG00005019819) ENSCLMG00005019811 ENSCLMG00005019807 NTRK3 (ENSCLMG00005019805) mrpl46 (ENSCLMG00005019804) mrps11 (ENSCLMG00005019803) PDPR (ENSCLMG00005019797) ENSCLMG00005019795 KIF13B (ENSCLMG00005017782) hmbox1a (ENSCLMG00005017732) TDP1 (ENSCLMG00005017721) Perciformes_a ANCESTRAL SPECIES 13 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.b ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Pike perch MODERN SPECIES 100 MAPK8IP1 (ENSSLUG00000025830) ENSSLUG00000025828 SNAP25 (ENSSLUG00000025825) LRRC28 (ENSSLUG00000025824) igf1rb (ENSSLUG00000025493) ap3s2 (ENSSLUG00000025346) ##22 ANPEP (ENSSLUG00000025307) ANPEP (ENSSLUG00000025113) mespaa (ENSSLUG00000025043) mespba (ENSSLUG00000025038) sv2ba (ENSSLUG00000025032) ENSSLUG00000025016 NTRK3 (ENSSLUG00000024999) mrpl46 (ENSSLUG00000024994) mrps11 (ENSSLUG00000024992) PDPR (ENSSLUG00000024972) ENSSLUG00000024959 KIF13B (ENSSLUG00000024720) hmbox1a (ENSSLUG00000024645) TDP1 (ENSSLUG00000024598) eprs1 (ENSSLUG00000022139) Channel bull blenny MODERN SPECIES 17 nod2 (ENSCGOG00000023937) nkd1 (ENSCGOG00000023948) brd7 (ENSCGOG00000023953) adcy7 (ENSCGOG00000023963) tent4b (ENSCGOG00000024003) heatr3 (ENSCGOG00000024017) cnep1r1 (ENSCGOG00000024091) sdr42e1 (ENSCGOG00000024095) wtip (ENSCGOG00000024096) gpib (ENSCGOG00000024133) GARRE1 (ENSCGOG00000000516) ss18l2 (ENSCGOG00000000637) lsm14ab (ENSCGOG00000000640) ENSCGOG00000000644 ENSCGOG00000000647 ap3s2 (ENSCGOG00000000654) ##22 ANPEP (ENSCGOG00000000704) mespaa (ENSCGOG00000000796) mespba (ENSCGOG00000000799) sv2ba (ENSCGOG00000000812) ENSCGOG00000000840 ENSCGOG00000000842 NTRK3 (ENSCGOG00000000853) mrpl46 (ENSCGOG00000000913) mrps11 (ENSCGOG00000000914) PDPR (ENSCGOG00000000920) ENSCGOG00000000971 ENSCGOG00000000982 ppfia1 (ENSCGOG00000001031) CTTN (ENSCGOG00000002061) SHANK2 (ENSCGOG00000002295) Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Gilthead seabream MODERN SPECIES 18 ENSSAUG00010022675 USP8 (ENSSAUG00010022679) hdc (ENSSAUG00010022696) slc27a2a (ENSSAUG00010022708) ENSSAUG00010022874 gatm (ENSSAUG00010022921) ENSSAUG00010022922 ENSSAUG00010022923 ENSSAUG00010022931 ENSSAUG00010022934 fam219b (ENSSAUG00010022936) COX5a2 (ENSSAUG00010022937) SNAP25 (ENSSAUG00010022941) LRRC28 (ENSSAUG00010022944) igf1rb (ENSSAUG00010022954) ap3s2 (ENSSAUG00010023180) ##22 ANPEP (ENSSAUG00010023189) ANPEP (ENSSAUG00010023403) mespaa (ENSSAUG00010023648) mespba (ENSSAUG00010023650) sv2ba (ENSSAUG00010023666) ENSSAUG00010023754 ENSSAUG00010023763 NTRK3 (ENSSAUG00010023776) mrpl46 (ENSSAUG00010023839) mrps11 (ENSSAUG00010023841) PDPR (ENSSAUG00010023846) ENSSAUG00010024053 KIF13B (ENSSAUG00010024064) hmbox1a (ENSSAUG00010024085) TDP1 (ENSSAUG00010024086) Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Large yellow croaker MODERN SPECIES 480 ulk3 (ENSLCRG00005010912) ENSLCRG00005010915 cplx3a (ENSLCRG00005010917) CSK (ENSLCRG00005010929) edc3 (ENSLCRG00005012518) cyp1a (ENSLCRG00005012519) ENSLCRG00005012520 ENSLCRG00005012522 ENSLCRG00005012524 ENSLCRG00005012528 fam219b (ENSLCRG00005012530) COX5A (ENSLCRG00005012535) SNAP25 (ENSLCRG00005012537) LRRC28 (ENSLCRG00005012542) igf1rb (ENSLCRG00005012567) ap3s2 (ENSLCRG00005015910) ##22 ANPEP (ENSLCRG00005015914) ANPEP (ENSLCRG00005016136) mespaa (ENSLCRG00005016549) mespba (ENSLCRG00005016550) sv2ba (ENSLCRG00005016553) ENSLCRG00005016779 NTRK3 (ENSLCRG00005016786) mrpl46 (ENSLCRG00005017179) mrps11 (ENSLCRG00005017180) PDPR (ENSLCRG00005017184) ENSLCRG00005017214 KIF13B (ENSLCRG00005017267) hmbox1a (ENSLCRG00005020072) TDP1 (ENSLCRG00005020076) eprs1 (ENSLCRG00005020114) European seabass MODERN SPECIES 18 ULK3 (ENSDLAG00005023334) ENSDLAG00005023333 ENSDLAG00005033157 CSK (ENSDLAG00005023158) ENSDLAG00005030853 CYP1A2 (ENSDLAG00005023109) ENSDLAG00005023100 ENSDLAG00005023097 ENSDLAG00005030418 ENSDLAG00005023087 ENSDLAG00005029723 ENSDLAG00005023073 ENSDLAG00005028654 ENSDLAG00005030001 igf1rb (ENSDLAG00005021438) ENSDLAG00005021362 ##22 ENSDLAG00005021075 mespba (ENSDLAG00005033688) sv2ba (ENSDLAG00005020743) ENSDLAG00005020703 NTRK3 (ENSDLAG00005020387) mrpl46 (ENSDLAG00005020366) mrps11 (ENSDLAG00005020360) ENSDLAG00005020209 ENSDLAG00005032823 ENSDLAG00005019529 hmbox1a (ENSDLAG00005019491) ENSDLAG00005019267 ENSDLAG00005016087 ENSDLAG00005016013 ENSDLAG00005016008 Tetraodontidae ANCESTRAL SPECIES 46 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Tetraodon MODERN SPECIES 26 ENSTNIG00000011933 cyp1a (ENSTNIG00000011932) CSK (ENSTNIG00000011931) cplx3a (ENSTNIG00000011930) ulk3 (ENSTNIG00000001896) ENSTNIG00000011928 tm2d3 (ENSTNIG00000011927) larp6a (ENSTNIG00000011926) ENSTNIG00000001218 ENSTNIG00000016048 fam219b (ENSTNIG00000011925) cox5aa (ENSTNIG00000011924) SNAP25 (ENSTNIG00000011923) LRRC28 (ENSTNIG00000011922) igf1rb (ENSTNIG00000011921) ap3s2 (ENSTNIG00000011920) ##22 ANPEP (ENSTNIG00000011919) ANPEP (ENSTNIG00000011918) mespaa (ENSTNIG00000000556) mespba (ENSTNIG00000011917) sv2ba (ENSTNIG00000011916) ENSTNIG00000011915 ENSTNIG00000011914 ENSTNIG00000011913 LHFPL4 (ENSTNIG00000011912) ENSTNIG00000003131 NTRK3 (ENSTNIG00000011911) mrpl46 (ENSTNIG00000011910) mrps11 (ENSTNIG00000011909) PDPR (ENSTNIG00000011908) ENSTNIG00000011907 Fugu MODERN SPECIES 4 CHST8 (ENSTRUG00000020165) ENSTRUG00000029359 ccnd1 (ENSTRUG00000015754) lto1 (ENSTRUG00000026152) fgf3 (ENSTRUG00000027654) ENSTRUG00000015724 THSD4 (ENSTRUG00000028384) ENSTRUG00000024847 ENSTRUG00000024639 ENSTRUG00000024094 fam219b (ENSTRUG00000022531) cox5aa (ENSTRUG00000015647) SNAP25 (ENSTRUG00000015620) LRRC28 (ENSTRUG00000015594) igf1rb (ENSTRUG00000015459) ap3s2 (ENSTRUG00000015431) ##22 ANPEP (ENSTRUG00000015317) ANPEP (ENSTRUG00000023856) mespaa (ENSTRUG00000022932) mespba (ENSTRUG00000020616) sv2ba (ENSTRUG00000015251) ENSTRUG00000021927 ENSTRUG00000033270 NTRK3 (ENSTRUG00000002667) mrpl46 (ENSTRUG00000023585) mrps11 (ENSTRUG00000020346) PDPR (ENSTRUG00000004703) ENSTRUG00000005668 KIF13B (ENSTRUG00000005689) hmbox1a (ENSTRUG00000006366) TDP1 (ENSTRUG00000006521) Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Carangaria ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Pleuronectoidei ANCESTRAL SPECIES 10 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452.h ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Tongue sole MODERN SPECIES 15 ENSCSEG00000011104 ENSCSEG00000011101 cplx3a (ENSCSEG00000011098) CSK (ENSCSEG00000011082) cyp1a (ENSCSEG00000011070) ENSCSEG00000011049 ENSCSEG00000011039 ENSCSEG00000011022 ENSCSEG00000011000 fam219b (ENSCSEG00000010990) cox5aa (ENSCSEG00000010910) ENSCSEG00000010895 SNAP25 (ENSCSEG00000010877) LRRC28 (ENSCSEG00000010856) igf1rb (ENSCSEG00000010813) ap3s2 (ENSCSEG00000010801) ##22 ANPEP (ENSCSEG00000010761) mespaa (ENSCSEG00000010740) mespba (ENSCSEG00000010719) sv2ba (ENSCSEG00000010699) ENSCSEG00000010687 ENSCSEG00000010656 NTRK3 (ENSCSEG00000010626) mrpl46 (ENSCSEG00000010621) mrps11 (ENSCSEG00000010615) PDPR (ENSCSEG00000010593) ENSCSEG00000010588 KIF13B (ENSCSEG00000010552) hmbox1a (ENSCSEG00000010331) TDP1 (ENSCSEG00000010313) eprs1 (ENSCSEG00000010266) Turbot MODERN SPECIES 17 ULK3 (ENSSMAG00000010042) ENSSMAG00000010070 ENSSMAG00000024557 CSK (ENSSMAG00000010099) ENSSMAG00000010176 CYP1A2 (ENSSMAG00000010200) ENSSMAG00000010219 ENSSMAG00000010235 ENSSMAG00000010254 ENSSMAG00000010300 ENSSMAG00000036332 ENSSMAG00000010316 ENSSMAG00000010322 ENSSMAG00000010399 ENSSMAG00000010426 ENSSMAG00000010557 ##22 ENSSMAG00000010589 ENSSMAG00000010607 ENSSMAG00000010662 mespba (ENSSMAG00000026233) sv2ba (ENSSMAG00000010684) ENSSMAG00000010778 NTRK3 (ENSSMAG00000010859) mrpl46 (ENSSMAG00000010974) mrps11 (ENSSMAG00000010954) ENSSMAG00000010992 ENSSMAG00000026734 ENSSMAG00000011045 hmbox1a (ENSSMAG00000011108) ENSSMAG00000011140 ENSSMAG00000011150 Carangaria_A ANCESTRAL SPECIES 20 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Barramundi perch MODERN SPECIES 105 ENSLCAG00010026840 ENSLCAG00010026843 ENSLCAG00010026844 ENSLCAG00010026846 ENSLCAG00010026849 ENSLCAG00010026850 ENSLCAG00010026851 GLO1 (ENSLCAG00010026852) eprs1 (ENSLCAG00010026871) ENSLCAG00010026899 ENSLCAG00010026900 ENSLCAG00010026901 SNAP25 (ENSLCAG00010026905) LRRC28 (ENSLCAG00010026907) igf1rb (ENSLCAG00010026927) ap3s2 (ENSLCAG00010026999) ##22 ANPEP (ENSLCAG00010027022) ANPEP (ENSLCAG00010027048) mespaa (ENSLCAG00010027057) mespba (ENSLCAG00010027060) sv2ba (ENSLCAG00010027063) ENSLCAG00010027068 ENSLCAG00010027071 NTRK3 (ENSLCAG00010027075) mrpl46 (ENSLCAG00010027081) mrps11 (ENSLCAG00010027082) PDPR (ENSLCAG00010027089) ENSLCAG00010027106 KIF13B (ENSLCAG00010027252) hmbox1a (ENSLCAG00010027366) TDP1 (ENSLCAG00010027374) Seriola ANCESTRAL SPECIES 13 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Greater amberjack MODERN SPECIES 1 ENSSDUG00000007561 ENSSDUG00000007572 CPLX3 (ENSSDUG00000007578) CSK (ENSSDUG00000007607) edc3 (ENSSDUG00000007671) cyp1a (ENSSDUG00000007695) ENSSDUG00000007715 ENSSDUG00000007724 ENSSDUG00000007745 ENSSDUG00000007759 fam219b (ENSSDUG00000007775) COX5A (ENSSDUG00000007791) SNAP25 (ENSSDUG00000007809) LRRC28 (ENSSDUG00000007831) IGF1R (ENSSDUG00000007895) ap3s2 (ENSSDUG00000007981) ##22 ANPEP (ENSSDUG00000008006) ANPEP (ENSSDUG00000008046) mespaa (ENSSDUG00000008233) mespba (ENSSDUG00000008248) sv2ba (ENSSDUG00000008252) ENSSDUG00000008270 ENSSDUG00000008310 NTRK3 (ENSSDUG00000008337) mrpl46 (ENSSDUG00000008387) mrps11 (ENSSDUG00000008450) PDPR (ENSSDUG00000008482) ENSSDUG00000008514 KIF13B (ENSSDUG00000008546) hmbox1a (ENSSDUG00000008816) TDP1 (ENSSDUG00000008869) Yellowtail amberjack MODERN SPECIES 3186 ulk3 (ENSSLDG00000016526) ENSSLDG00000016506 cplx3a (ENSSLDG00000016499) CSK (ENSSLDG00000016451) ENSSLDG00000016431 cyp1a (ENSSLDG00000016420) ENSSLDG00000016405 ENSSLDG00000016396 ENSSLDG00000016381 ENSSLDG00000016359 fam219b (ENSSLDG00000016348) COX5A (ENSSLDG00000016326) SNAP25 (ENSSLDG00000016298) LRRC28 (ENSSLDG00000016277) igf1rb (ENSSLDG00000016218) ap3s2 (ENSSLDG00000016191) ##22 ANPEP (ENSSLDG00000016157) mespaa (ENSSLDG00000016134) mespba (ENSSLDG00000016123) sv2ba (ENSSLDG00000016100) ENSSLDG00000016072 ANPEP (ENSSLDG00000015869) ENSSLDG00000015782 NTRK3 (ENSSLDG00000015705) mrpl46 (ENSSLDG00000015671) mrps11 (ENSSLDG00000015652) PDPR (ENSSLDG00000015598) ENSSLDG00000015579 KIF13B (ENSSLDG00000015535) hmbox1a (ENSSLDG00000015485) TDP1 (ENSSLDG00000015413) Anabantaria ANCESTRAL SPECIES 11 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Zig-zag eel MODERN SPECIES 17 cep89 (ENSMAMG00000008627) ENSMAMG00000008600 ENSMAMG00000008564 ENSMAMG00000008530 ENSMAMG00000025751 ENSMAMG00000008221 ENSMAMG00000008190 ENSMAMG00000025521 ENSMAMG00000028057 ENSMAMG00000026945 ENSMAMG00000025788 ENSMAMG00000028118 ENSMAMG00000006952 ENSMAMG00000006912 igf1rb (ENSMAMG00000006856) ENSMAMG00000028682 ##22 ENSMAMG00000006815 ENSMAMG00000006797 mespaa (ENSMAMG00000006779) mespba (ENSMAMG00000024292) sv2ba (ENSMAMG00000006746) ENSMAMG00000006728 NTRK3 (ENSMAMG00000006607) mrpl46 (ENSMAMG00000006593) mrps11 (ENSMAMG00000006581) ENSMAMG00000006529 ENSMAMG00000006518 ENSMAMG00000006376 hmbox1a (ENSMAMG00000006331) ENSMAMG00000006272 ENSMAMG00000006099 Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000157689 ENSGT00390000001195.b ENSGT00950000182938.b.b.b.b.a ENSGT00940000157431.c.b ENSGT00390000016435.g.b ENSGT00950000183037.A.a ENSGT00390000014907.A ENSGT00930000151452 ENSGT00940000158358.b ENSGT00940000156052.k.a ENSGT00390000000860.a ENSGT00390000001424.wb.b ENSGT00950000182843.a.a.a.b.a.a.a.b ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00530000063712.a.a.o.a ENSGT00530000063712.a.a.o.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a.m.a ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00950000183149.C.a ENSGT00940000155500.e ENSGT00940000154928.c.a.a ENSGT00390000002211 ENSGT00550000074815 Climbing perch MODERN SPECIES 16 ULK3 (ENSATEG00000004106) ENSATEG00000004116 ENSATEG00000029741 ENSATEG00000028710 CSK (ENSATEG00000004157) ENSATEG00000004205 CYP1A2 (ENSATEG00000004218) ENSATEG00000004224 ENSATEG00000004264 ENSATEG00000004272 ENSATEG00000004284 ENSATEG00000004299 ENSATEG00000025281 ENSATEG00000004356 ENSATEG00000004408 ENSATEG00000004445 ##22 ENSATEG00000004490 ENSATEG00000004967 ENSATEG00000005199 mespba (ENSATEG00000005218) sv2ba (ENSATEG00000005250) ENSATEG00000005542 NTRK3 (ENSATEG00000005562) mrpl46 (ENSATEG00000005654) mrps11 (ENSATEG00000005662) ENSATEG00000005675 ENSATEG00000005788 ENSATEG00000005800 hmbox1a (ENSATEG00000006405) ENSATEG00000006461 ENSATEG00000006493 Siamese fighting fish MODERN SPECIES 14 rhpn2 (ENSBSLG00000025461) zgc:165481 (ENSBSLG00000025398) cep89 (ENSBSLG00000025378) ABCC12 (ENSBSLG00000024986) ENSBSLG00000024956 ENSBSLG00000024895 ENSBSLG00000024867 SLCO3A1 (ENSBSLG00000024809) gnrhr2 (ENSBSLG00000024798) ENSBSLG00000024794 fam219b (ENSBSLG00000024793) cox5aa (ENSBSLG00000024788) SNAP25 (ENSBSLG00000024781) LRRC28 (ENSBSLG00000024772) igf1rb (ENSBSLG00000023039) ap3s2 (ENSBSLG00000022766) ##22 ANPEP (ENSBSLG00000022664) ANPEP (ENSBSLG00000022639) mespaa (ENSBSLG00000022636) mespba (ENSBSLG00000022631) sv2ba (ENSBSLG00000022546) ENSBSLG00000022468 NTRK3 (ENSBSLG00000021924) mrpl46 (ENSBSLG00000021874) mrps11 (ENSBSLG00000021862) PDPR (ENSBSLG00000021728) ENSBSLG00000021694 KIF13B (ENSBSLG00000021233) hmbox1a (ENSBSLG00000021005) TDP1 (ENSBSLG00000020645) eprs1 (ENSBSLG00000017848) Protacanthopterygii ANCESTRAL SPECIES 160 ENSGT00940000157599.c.b ENSGT00940000165857.a ENSGT00940000159833 ENSGT00390000012547.a.f.a ENSGT00940000161170.c ENSGT00940000154870.D.a.b ENSGT00390000009995 ENSGT01050000244841.A.a.b.qb.a ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e ENSGT00940000156205.g ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.a ENSGT00950000182940.b.a.a.g.a ENSGT00530000063712.a.a.o.b ENSGT00530000063712.a.a.o.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00940000153377.B Northern pike MODERN SPECIES 16 ZNF710 (ENSELUG00000017700) SEMA4B (ENSELUG00000017664) ENSELUG00000017616 serf2b (ENSELUG00000017587) ENSELUG00000017549 ENSELUG00000017531 gnrhr2 (ENSELUG00000017507) SLCO3A1 (ENSELUG00000000685) ENSELUG00000017455 ENSELUG00000017428 ENSELUG00000017391 ENSELUG00000001388 ENSELUG00000017279 ENSELUG00000026023 igf1rb (ENSELUG00000017203) ap3s2 (ENSELUG00000017177) ##22 ANPEP (ENSELUG00000017096) ANPEP (ENSELUG00000031379) sv2ba (ENSELUG00000016884) ENSELUG00000032446 ENSELUG00000016769 NTRK3 (ENSELUG00000016689) ENSELUG00000016487 mrpl46 (ENSELUG00000016469) mrps11 (ENSELUG00000016452) PDPR (ENSELUG00000016394) glg1b (ENSELUG00000016335) WDR59 (ENSELUG00000016242) NOB1 (ENSELUG00000016199) cog8 (ENSELUG00000016162) nip7 (ENSELUG00000016139) Salmoninae ANCESTRAL SPECIES 287 ENSGT00940000161170.c.h ENSGT00940000159833 ENSGT00390000012547.a.f.a ENSGT00940000161170.c.g ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b ENSGT00940000154146.b.a.f ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b ENSGT00940000157600 ENSGT00390000015857 ENSGT00390000015893.h ENSGT00950000182971.A ENSGT00940000158316 Salmoninae_a ANCESTRAL SPECIES 132 ENSGT00940000159833 ENSGT00390000012547.a.f.a ENSGT00940000161170.c.g ENSGT00390000009995 ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b ENSGT00940000154146.b.a.f ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b ENSGT00940000157600 ENSGT00390000015857 ENSGT00390000015893.h ENSGT00950000182971.A ENSGT00940000158316 Salmo ANCESTRAL SPECIES 165 ENSGT00390000009995 ENSGT01080000257410.A.f.l ENSGT00940000154856.A.b.b ENSGT00940000157540.B ENSGT00940000156291.e.h ENSGT00940000156291.e.g ENSGT00940000157771.x ENSGT00940000156682.e.a.h ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a.m ENSGT00940000154876.a.a.a.a.n ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b ENSGT00940000155645.i.b ENSGT00390000015400.o ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b River trout DUPLICATION River trout MODERN SPECIES 169 ENSSTUG00000036675 LRRC28 (ENSSTUG00000036653) ENSSTUG00000036649 igf1rb (ENSSTUG00000034570) ap3s2 (ENSSTUG00000034431) ##22 ANPEP (ENSSTUG00000033098) ENSSTUG00000032857 ENSSTUG00000032845 ENSSTUG00000032838 River trout MODERN SPECIES 3 ENSSTUG00000031549 zdhhc7 (ENSSTUG00000031529) zdhhc7 (ENSSTUG00000031446) ENSSTUG00000031369 nip7 (ENSSTUG00000017490) cog8 (ENSSTUG00000017420) ENSSTUG00000017406 WDR59 (ENSSTUG00000017297) tmed3 (ENSSTUG00000017283) IDH2 (ENSSTUG00000017237) ZNF710 (ENSSTUG00000017219) SERF2 (ENSSTUG00000017195) ENSSTUG00000017191 LRRC28 (ENSSTUG00000017182) IGF1R (ENSSTUG00000011980) ap3s2 (ENSSTUG00000011811) ##22 RGS9BP (ENSSTUG00000011805) SLC7A9 (ENSSTUG00000011793) nudt19 (ENSSTUG00000011787) nudt19 (ENSSTUG00000011774) zgc:165481 (ENSSTUG00000011768) cep89 (ENSSTUG00000011701) ENSSTUG00000011680 rhpn2 (ENSSTUG00000010864) SMAD6 (ENSSTUG00000010836) ENSSTUG00000010826 ENSSTUG00000010818 ENSSTUG00000010812 CHST1 (ENSSTUG00000010805) ENSSTUG00000010798 slc35c1 (ENSSTUG00000010792) Atlantic salmon MODERN SPECIES 18 cog8 (ENSSSAG00000045757) ENSSSAG00000045763 ENSSSAG00000083888 ENSSSAG00000087405 ENSSSAG00000121447 ENSSSAG00000112586 ENSSSAG00000110224 ENSSSAG00000098759 ENSSSAG00000058434 ENSSSAG00000058440 ENSSSAG00000085170 ENSSSAG00000058400 ENSSSAG00000117097 igf1rb (ENSSSAG00000086371) ENSSSAG00000089249 ENSSSAG00000083118 ##22 ENSSSAG00000046258 ENSSSAG00000101377 ENSSSAG00000045172 ENSSSAG00000045138 ENSSSAG00000095632 NTRK3 (ENSSSAG00000102423) RM46 (ENSSSAG00000041527) mrps11 (ENSSSAG00000041545) ENSSSAG00000041584 ENSSSAG00000042074 Oncorhynchus ANCESTRAL SPECIES 120 ENSGT00390000012547.a.f.a.b ENSGT00940000161170.c.h ENSGT00390000009995 ENSGT01080000257410.A.f.l ENSGT00940000157540.B ENSGT00940000156291.e.e ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b.h.a ENSGT00940000154146.b.a.f ENSGT00940000155645.i.b ENSGT00390000015400 ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b.j Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 18 ENSOMYG00000023342 ENSOMYG00000023383 ENSOMYG00000067538 ENSOMYG00000064992 ENSOMYG00000070692 ENSOMYG00000073048 ENSOMYG00000072148 ENSOMYG00000068422 ENSOMYG00000077155 ENSOMYG00000055490 ENSOMYG00000059720 ENSOMYG00000048578 igf1rb (ENSOMYG00000059870) ENSOMYG00000029587 ##22 ENSOMYG00000049508 ENSOMYG00000071477 ENSOMYG00000059839 ENSOMYG00000061193 ENSOMYG00000059825 NTRK3 (ENSOMYG00000048196) ENSOMYG00000018051 mrps11 (ENSOMYG00000064766) ENSOMYG00000065317 ENSOMYG00000053557 ENSOMYG00000066086 glg1b (ENSOMYG00000055554) ENSOMYG00000056442 ENSOMYG00000049839 cog8 (ENSOMYG00000028024) Rainbow trout MODERN SPECIES 27 ENSOMYG00000073691 anxa2b (ENSOMYG00000056946) ENSOMYG00000008458 ENSOMYG00000053311 ENSOMYG00000051877 ENSOMYG00000072130 ENSOMYG00000055705 ENSOMYG00000031153 ENSOMYG00000076770 ENSOMYG00000031193 ENSOMYG00000058801 ENSOMYG00000057627 ENSOMYG00000073348 ENSOMYG00000058992 igf1rb (ENSOMYG00000066583) ENSOMYG00000075368 ##22 ENSOMYG00000065514 ENSOMYG00000030972 ENSOMYG00000031107 ENSOMYG00000069974 NTRK3 (ENSOMYG00000050545) ENSOMYG00000074624 mrps11 (ENSOMYG00000025548) ENSOMYG00000050086 ENSOMYG00000028154 ENSOMYG00000073210 ENSOMYG00000063510 ENSOMYG00000071833 Oncorhynchus_a ANCESTRAL SPECIES 159 ENSGT00390000012547.a.f.a.b ENSGT00940000161170.c.h ENSGT00390000009995 ENSGT01080000257410.A.f.l ENSGT00940000154856.A.b.b ENSGT00940000157540.B ENSGT00940000156291.e.e ENSGT00940000157771 ENSGT00940000156682.e.a ENSGT00970000193421.C.b ##22 ENSGT00940000154876.a.a.a.a ENSGT00940000154876.a.a.a.b ENSGT00950000182940.b.a.a.g.b ENSGT00940000154146.b.b.b.h.a ENSGT00940000154146.b.a.f ENSGT00940000155645.i.b ENSGT00390000015400.k ENSGT00390000016068 ENSGT00940000159082 ENSGT00390000011262.e.b.j Chinook salmon MODERN SPECIES 1624 ap3s2 (ENSOTSG00005032281) ##22 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1274 AP3S2 (ENSOKIG00005042009) ##22 ANPEP (ENSOKIG00005041456) ANPEP (ENSOKIG00005040432) ENSOKIG00005040028 ENSOKIG00005039993 ENSOKIG00005039982 ENSOKIG00005039957 Coho salmon MODERN SPECIES 32 ENSOKIG00005032052 nip7 (ENSOKIG00005032142) cog8 (ENSOKIG00005032158) NOB1 (ENSOKIG00005032188) WDR59 (ENSOKIG00005032279) IDH2 (ENSOKIG00005033249) ENSOKIG00005033461 ENSOKIG00005033496 SLCO3A1 (ENSOKIG00005033534) ENSOKIG00005033635 ENSOKIG00005033646 ENSOKIG00005033656 ENSOKIG00005033731 LRRC28 (ENSOKIG00005034015) igf1rb (ENSOKIG00005034209) AP3S2 (ENSOKIG00005037956) ##22 ANPEP (ENSOKIG00005038124) ANPEP (ENSOKIG00005039352) sv2ba (ENSOKIG00005040233) ENSOKIG00005040377 ENSOKIG00005040392 NTRK3 (ENSOKIG00005040435) mrpl46 (ENSOKIG00005040562) mrps11 (ENSOKIG00005040591) PDPR (ENSOKIG00005040647) ENSOKIG00005040984 ENSOKIG00005040992 GLG1 (ENSOKIG00005041123) ENSOKIG00005042977 Spotted gar MODERN SPECIES 669 lysmd4 (ENSLOCG00000014395) ARRDC4 (ENSLOCG00000014397) nr2f2 (ENSLOCG00000014402) MCTP2 (ENSLOCG00000014405) mef2aa (ENSLOCG00000014408) LRRC28 (ENSLOCG00000014419) TTC23 (ENSLOCG00000014422) synm (ENSLOCG00000014429) ENSLOCG00000014432 igf1ra (ENSLOCG00000014435) ENSLOCG00000014457 ENSLOCG00000014459 arpin (ENSLOCG00000014461) ENSLOCG00000014462 si:dkey-12e7.1 (ENSLOCG00000017950) ap3s2 (ENSLOCG00000014474) ##22 anpepb.1 (ENSLOCG00000014478) mespaa (ENSLOCG00000014493) mespaa (ENSLOCG00000017951) mespba (ENSLOCG00000014496) sv2ba (ENSLOCG00000014500) ENSLOCG00000014506 si:dkey-172h23.2 (ENSLOCG00000014508) KLHL25 (ENSLOCG00000014512) AGBL1 (ENSLOCG00000014513) ntrk3a (ENSLOCG00000014521) mrpl46 (ENSLOCG00000014530) mrps11 (ENSLOCG00000014531) det1 (ENSLOCG00000014536) kif7 (ENSLOCG00000014540) nptna (ENSLOCG00000014545) Reedfish DUPLICATION Reedfish MODERN SPECIES 8 prmt1 (ENSECRG00000017184) SH2D3A (ENSECRG00000017240) trip10a (ENSECRG00000017283) ENSECRG00000017358 ENSECRG00000017476 nr5a5 (ENSECRG00000017711) raver1 (ENSECRG00000018070) TYK2 (ENSECRG00000018110) cdc37 (ENSECRG00000018208) GCNT3 (ENSECRG00000018327) gtf2a2 (ENSECRG00000018344) bnip2 (ENSECRG00000018372) arpin (ENSECRG00000018421) ENSECRG00000018446 si:dkey-12e7.1 (ENSECRG00000018486) ap3s2 (ENSECRG00000018497) ##22 ANPEP (ENSECRG00000018716) ANPEP (ENSECRG00000020900) ENSECRG00000020931 RASGRF1 (ENSECRG00000020947) ctsh (ENSECRG00000020983) ENSECRG00000021007 WDR76 (ENSECRG00000021030) FRMD5 (ENSECRG00000021050) FRMD5 (ENSECRG00000021062) GOLM2 (ENSECRG00000021083) ctdspl2a (ENSECRG00000021123) ENSECRG00000021153 ENSECRG00000021186 ENSECRG00000021202 dedd1 (ENSECRG00000021218) Reedfish MODERN SPECIES 15 FAM174A (ENSECRG00000005569) ENSECRG00000005561 chd1 (ENSECRG00000005529) reep5 (ENSECRG00000005512) ENSECRG00000005499 MCC (ENSECRG00000005480) YTHDC2 (ENSECRG00000005460) KCNN2 (ENSECRG00000005448) trim36 (ENSECRG00000005429) pggt1b (ENSECRG00000005404) CCDC112 (ENSECRG00000005389) fem1c (ENSECRG00000005385) tmed7 (ENSECRG00000005375) ENSECRG00000005364 cdo1 (ENSECRG00000005351) ENSECRG00000005341 ##22 LVRN (ENSECRG00000005276) COMMD10 (ENSECRG00000005211) ENSECRG00000005202 sema6a (ENSECRG00000005170) ENSECRG00000005156 DTWD2 (ENSECRG00000005143) DMXL1 (ENSECRG00000005115) TNFAIP8 (ENSECRG00000005080) hsd17b4 (ENSECRG00000005064) prr16 (ENSECRG00000005055) SRFBP1 (ENSECRG00000005039) loxa (ENSECRG00000005028) ENSECRG00000005021 sncaip (ENSECRG00000005009) SNX2 (ENSECRG00000004967) Yeast MODERN SPECIES 10 YJL007C CCT8 (YJL008C) YJL009W NOP9 (YJL010C) RPC17 (YJL011C) VTC4 (YJL012C) MAD3 (YJL013C) CCT3 (YJL014W) YJL015C YJL016W MPS3 (YJL019W) YJL020W-A BBC1 (YJL020C) YJL022W PET130 (YJL023C) APS3 (YJL024C) ##22 RRN7 (YJL025W) YJL026C-A RNR2 (YJL026W) YJL027C YJL028W VPS53 (YJL029C) MAD2 (YJL030W) BET4 (YJL031C) YJL032W HCA4 (YJL033W) KAR2 (YJL034W) TAD2 (YJL035C) SNX4 (YJL036W) IRC18 (YJL037W) LOH1 (YJL038C)