Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000161993	ENSGT00390000000337	ENSGT01030000234551.k.d.b.b.c.a	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940	ENSGT00950000183000.c.b
Pecora	ANCESTRAL SPECIES	18	ENSGT01030000234551.k.d.b.a.a.b.i	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.a	ENSGT01030000234551.k.d.b.a.a.a.a.f	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a	ENSGT01030000234551.k.d.b.b.c.a	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00940000163541.g	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00950000183000.c.b	ENSGT00940000158135
Percora_a	ANCESTRAL SPECIES	20	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.a	ENSGT01030000234551.k.d.b.a.a.a.a.f	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a	ENSGT01030000234551.k.d.b.b.c.a.h	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00940000163541.g	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00950000183000.c.b	ENSGT00940000158135
Bovidae	ANCESTRAL SPECIES	20	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.a	ENSGT01030000234551.k.d.b.a.a.a.a.f	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a	ENSGT01030000234551.k.d.b.b.c.a.h.b.a	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00940000163541.g	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00950000183000.c.b	ENSGT00940000158135
Bovinae	ANCESTRAL SPECIES	19	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a.f	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000154690.p.b	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a.l.b #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940	ENSGT00950000183000.c.b	ENSGT00940000158135
Bos	ANCESTRAL SPECIES	18	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000154690.p.b	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a	ENSGT00390000006205.b #24	ENSGT00940000153431.a.l.b #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940.gb	ENSGT00950000183000.c.b
Bos_a	ANCESTRAL SPECIES	10	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.b	ENSGT01030000234551.k.d.b.a.a.b.i	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a	ENSGT00940000156499	ENSGT00940000155573	ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000154690.p.b	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a	ENSGT00390000006205.b #24	ENSGT00940000153431.a.l.b #25	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940.fb.a	ENSGT00940000154940.gb	ENSGT00950000183000.c.b
Wild yak	MODERN SPECIES	298														COCH (ENSBMUG00000012618) #20	STRN3 (ENSBMUG00000012562) #21	AP4S1 (ENSBMUG00000012479) #22	HECTD1 (ENSBMUG00000012439) #23	HEATR5A (ENSBMUG00000012373) #24	DTD2 (ENSBMUG00000012325) #25	ENSBMUG00000012283 #26
Domestic yak	MODERN SPECIES	8	ENSBGRG00000005384	ENSBGRG00000005401	ENSBGRG00000005455	ENSBGRG00000005616	STXBP6 (ENSBGRG00000005667)	NOVA1 (ENSBGRG00000005746)	ENSBGRG00000005891	ENSBGRG00000005905	FOXG1 (ENSBGRG00000005921)	PRKD1 (ENSBGRG00000006007)	G2E3 (ENSBGRG00000006521)	SCFD1 (ENSBGRG00000006679)	ENSBGRG00000006918	COCH (ENSBGRG00000006941) #20	STRN3 (ENSBGRG00000007105) #21	AP4S1 (ENSBGRG00000007586) #22	HECTD1 (ENSBGRG00000007751) #23	ENSBGRG00000007953	HEATR5A (ENSBGRG00000007992) #24	DTD2 (ENSBGRG00000008143) #25	NUBPL (ENSBGRG00000008223)	ENSBGRG00000008307	ENSBGRG00000008358	ARHGAP5 (ENSBGRG00000008406)	AKAP6 (ENSBGRG00000008525)	NPAS3 (ENSBGRG00000008650)	ENSBGRG00000009008	EGLN3 (ENSBGRG00000009029)	SPTSSA (ENSBGRG00000009176)	EAPP (ENSBGRG00000009269)	CFL2 (ENSBGRG00000009349)
Bos_b	ANCESTRAL SPECIES	18	ENSGT01030000234551.k.d.b.a.a.b.i	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.a	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT01100000263480.a.a.b.a.b.a.a.b.a.a.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.a.a.a	ENSGT00390000006205.b #24	ENSGT00940000153431.a.l.b #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940.gb	ENSGT00950000183000.c.b
Hybrid Bos Indicus	MODERN SPECIES	13	ENSBIXG00005009049	ENSBIXG00005005146	ENSBIXG00005001958	ENSBIXG00005001991	GZMB (ENSBIXG00005002071)	STXBP6 (ENSBIXG00005002110)	NOVA1 (ENSBIXG00005005044)	ENSBIXG00005002282	FOXG1 (ENSBIXG00005002315)	PRKD1 (ENSBIXG00005028790)	G2E3 (ENSBIXG00005028509)	SCFD1 (ENSBIXG00005028488)	ENSBIXG00005028450	COCH (ENSBIXG00005028431) #20	STRN3 (ENSBIXG00005004875) #21	AP4S1 (ENSBIXG00005028268) #22	ENSBIXG00005028238	HECTD1 (ENSBIXG00005028215) #23	ENSBIXG00005028130	HEATR5A (ENSBIXG00005028101) #24	ENSBIXG00005027995 #25	GPR33 (ENSBIXG00005027980)	NUBPL (ENSBIXG00005027931)	ENSBIXG00005004787	ENSBIXG00005027817	ARHGAP5 (ENSBIXG00005027783)	AKAP6 (ENSBIXG00005004751)	ENSBIXG00005027635	NPAS3 (ENSBIXG00005004743)	EGLN3 (ENSBIXG00005004670)	SPTSSA (ENSBIXG00005027156)
Cow	MODERN SPECIES	13	ENSBTAG00000050353	ENSBTAG00000040134	ENSBTAG00000010828	ENSBTAG00000013055	ENSBTAG00000038080	GZMB (ENSBTAG00000010057)	STXBP6 (ENSBTAG00000021291)	NOVA1 (ENSBTAG00000002170)	ENSBTAG00000031558	FOXG1 (ENSBTAG00000011113)	PRKD1 (ENSBTAG00000012789)	G2E3 (ENSBTAG00000001617)	SCFD1 (ENSBTAG00000017565)	COCH (ENSBTAG00000021844) #20	STRN3 (ENSBTAG00000021845) #21	AP4S1 (ENSBTAG00000017201) #22	HECTD1 (ENSBTAG00000032477) #23	HEATR5A (ENSBTAG00000022847) #24	ENSBTAG00000038020 #25	GPR33 (ENSBTAG00000010536)	NUBPL (ENSBTAG00000044121)	ENSBTAG00000055201	ARHGAP5 (ENSBTAG00000027024)	AKAP6 (ENSBTAG00000017719)	NPAS3 (ENSBTAG00000004462)	EGLN3 (ENSBTAG00000008172)	SPTSSA (ENSBTAG00000013981)	EAPP (ENSBTAG00000003419)	SNX6 (ENSBTAG00000012873)	CFL2 (ENSBTAG00000015053)	BAZ1A (ENSBTAG00000020164)
American bison	MODERN SPECIES	3159										ENSBBBG00000005060	G2E3 (ENSBBBG00000009177)	ENSBBBG00000009180	SCFD1 (ENSBBBG00000019438)	COCH (ENSBBBG00000019503) #20	STRN3 (ENSBBBG00000007277) #21	AP4S1 (ENSBBBG00000019582) #22	HECTD1 (ENSBBBG00000019676) #23	HEATR5A (ENSBBBG00000019715) #24	ENSBBBG00000019724 #25	NUBPL (ENSBBBG00000019729)	ARHGAP5 (ENSBBBG00000019759)	AKAP6 (ENSBBBG00000019789)	NPAS3 (ENSBBBG00000007628)
Caprinae	ANCESTRAL SPECIES	22	ENSGT01030000234551.k.d.b.a.a.a.a.e.b.a.c	ENSGT01030000234551.k.d.b.a.a.b.i	ENSGT01030000234551.k.d.b.a.a.b.j	ENSGT01030000234551.k.d.b.a.a.a.b.a.c	ENSGT01030000234551.k.d.b.a.a.a.a.e.a	ENSGT01030000234551.k.d.b.a.a.a.a.f	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499.k	ENSGT00940000155573	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00940000163541.g	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940	ENSGT00950000183000.c.b
Goat	MODERN SPECIES	13	ENSCHIG00000015005	ENSCHIG00000016245	ENSCHIG00000015715	ENSCHIG00000020332	ENSCHIG00000022005	STXBP6 (ENSCHIG00000018400)	ENSCHIG00000026291	NOVA1 (ENSCHIG00000018944)	FOXG1 (ENSCHIG00000022539)	PRKD1 (ENSCHIG00000017644)	ENSCHIG00000019781	G2E3 (ENSCHIG00000025802)	SCFD1 (ENSCHIG00000024335)	COCH (ENSCHIG00000007305) #20	STRN3 (ENSCHIG00000019005) #21	AP4S1 (ENSCHIG00000016142) #22	HECTD1 (ENSCHIG00000018114) #23	HEATR5A (ENSCHIG00000010796) #24	ENSCHIG00000011637 #25	GPR33 (ENSCHIG00000007857)	NUBPL (ENSCHIG00000006710)	ARHGAP5 (ENSCHIG00000010874)	AKAP6 (ENSCHIG00000024298)	NPAS3 (ENSCHIG00000019397)	EGLN3 (ENSCHIG00000016948)	ENSCHIG00000021678	ENSCHIG00000008804	ENSCHIG00000016213	EAPP (ENSCHIG00000022171)	ENSCHIG00000017907	CFL2 (ENSCHIG00000015758)
Rambouillet Sheep	MODERN SPECIES	9	ENSOARG00020024767	ENSOARG00020003344	ENSOARG00020003394	ENSOARG00020003470	ENSOARG00020003828	ENSOARG00020004153	ENSOARG00020004189	ENSOARG00020004201	NOVA1 (ENSOARG00020004244)	FOXG1 (ENSOARG00020004300)	PRKD1 (ENSOARG00020004370)	G2E3 (ENSOARG00020004595)	SCFD1 (ENSOARG00020004656)	COCH (ENSOARG00020004770) #20	STRN3 (ENSOARG00020004854) #21	AP4S1 (ENSOARG00020004957) #22	HECTD1 (ENSOARG00020005016) #23	HEATR5A (ENSOARG00020005213) #24	DTD2 (ENSOARG00020005329) #25	GPR33 (ENSOARG00020005349)	NUBPL (ENSOARG00020005362)	ENSOARG00020005406	ARHGAP5 (ENSOARG00020005438)	AKAP6 (ENSOARG00020005604)	NPAS3 (ENSOARG00020005668)	EGLN3 (ENSOARG00020005770)	ENSOARG00020005825	ENSOARG00020005839	SNX6 (ENSOARG00020005948)	CFL2 (ENSOARG00020006245)	BAZ1A (ENSOARG00020006340)
Siberian musk deer	MODERN SPECIES	1275									NOVA1 (ENSMMSG00000023209)	FOXG1 (ENSMMSG00000023196)	PRKD1 (ENSMMSG00000023150)	G2E3 (ENSMMSG00000023121)	SCFD1 (ENSMMSG00000023110)	ENSMMSG00000023033 #20	STRN3 (ENSMMSG00000022995) #21	AP4S1 (ENSMMSG00000022976) #22	HECTD1 (ENSMMSG00000022929) #23	ENSMMSG00000022922	HEATR5A (ENSMMSG00000022882) #24	DTD2 (ENSMMSG00000022862) #25	GPR33 (ENSMMSG00000022855)
Yarkand deer	DUPLICATION
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	370																ENSCHYG00000018784 #22
Yarkand deer	MODERN SPECIES	1064																ENSCHYG00000009018 #22
Yarkand deer	DUPLICATION
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	4	LOXL1 (ENSCHYG00000020877)	ENSCHYG00000020922	ENSCHYG00000021005	ENSCHYG00000021099	GZMB (ENSCHYG00000021148)	STXBP6 (ENSCHYG00000021255)	NOVA1 (ENSCHYG00000021362)	ENSCHYG00000021616	ENSCHYG00000021647	ENSCHYG00000021689	ENSCHYG00000022162	ENSCHYG00000022282	ENSCHYG00000022664	ENSCHYG00000022706 #20	ENSCHYG00000022798 #21	ENSCHYG00000022926 #22	ENSCHYG00000023105 #23	ENSCHYG00000023175 #24	ENSCHYG00000023238 #25	ENSCHYG00000023264	ENSCHYG00000023278	ENSCHYG00000023411	ENSCHYG00000023459	ENSCHYG00000023691	ENSCHYG00000023954	ENSCHYG00000024112	ENSCHYG00000024190	ENSCHYG00000004572 #20	ENSCHYG00000004693 #21	ENSCHYG00000004784 #22	ENSCHYG00000004808 #23
Yarkand deer	MODERN SPECIES	4	ENSCHYG00000022798 #21	ENSCHYG00000022926 #22	ENSCHYG00000023105 #23	ENSCHYG00000023175 #24	ENSCHYG00000023238 #25	ENSCHYG00000023264	ENSCHYG00000023278	ENSCHYG00000023411	ENSCHYG00000023459	ENSCHYG00000023691	ENSCHYG00000023954	ENSCHYG00000024112	ENSCHYG00000024190	ENSCHYG00000004572 #20	ENSCHYG00000004693 #21	ENSCHYG00000004784 #22	ENSCHYG00000004808 #23	ENSCHYG00000004859 #24	ENSCHYG00000005154 #25	ENSCHYG00000005175	ENSCHYG00000005213	ENSCHYG00000005261	ENSCHYG00000005283	ENSCHYG00000005372	ENSCHYG00000005433	NPAS3 (ENSCHYG00000005548)	EGLN3 (ENSCHYG00000006118)	ENSCHYG00000006192	SPTSSA (ENSCHYG00000006204)	ENSCHYG00000006229	EAPP (ENSCHYG00000006243)
Yarkand deer	MODERN SPECIES	3	ACIN1 (ENSCHYG00000015090)	CDH24 (ENSCHYG00000016351)	PSMB11 (ENSCHYG00000016390)	ENSCHYG00000016436	C14orf93 (ENSCHYG00000016592)	AJUBA (ENSCHYG00000016731)	HAUS4 (ENSCHYG00000016879)	PRMT5 (ENSCHYG00000017109)	RBM23 (ENSCHYG00000018246)	REM2 (ENSCHYG00000018358)	LRP10 (ENSCHYG00000018426)	MMP14 (ENSCHYG00000018620)	SLC7A7 (ENSCHYG00000018767)	ENSCHYG00000018959	OXA1L (ENSCHYG00000019267)	ENSCHYG00000019500 #22	ENSCHYG00000019651	ABHD4 (ENSCHYG00000019707)	ENSCHYG00000019819	ENSCHYG00000019884	TRDV3 (ENSCHYG00000020003)	ENSCHYG00000009457	TRDV2 (ENSCHYG00000009486)	ENSCHYG00000009499	OR4E1 (ENSCHYG00000009527)	OR4E2 (ENSCHYG00000009552)	ENSCHYG00000009578	OR10G3 (ENSCHYG00000009604)	ENSCHYG00000009619	SALL2 (ENSCHYG00000009676)	METTL3 (ENSCHYG00000009777)
Yarkand deer	MODERN SPECIES	4	GSKIP (ENSCHYG00000024574)	ATG2B (ENSCHYG00000024459)	ENSCHYG00000024448	ENSCHYG00000024438	BDKRB1 (ENSCHYG00000024385)	ENSCHYG00000024356	ENSCHYG00000024343	TCL1A (ENSCHYG00000024332)	ENSCHYG00000024310	GLRX5 (ENSCHYG00000024294)	SYNE3 (ENSCHYG00000024117)	CLMN (ENSCHYG00000024002)	DICER1 (ENSCHYG00000023880)	GSC (ENSCHYG00000023856)	ENSCHYG00000023818	ENSCHYG00000023780 #22	ENSCHYG00000023693	SERPINA5 (ENSCHYG00000023635)	SERPINA12 (ENSCHYG00000023498)	ENSCHYG00000023475	SERPINA11 (ENSCHYG00000023440)	SERPINA1 (ENSCHYG00000023389)	SERPINA6 (ENSCHYG00000023370)	SERPINA10 (ENSCHYG00000023333)	PPP4R4 (ENSCHYG00000023072)	ENSCHYG00000023007	ENSCHYG00000022991	ENSCHYG00000022953	DDX24 (ENSCHYG00000022853)	OTUB2 (ENSCHYG00000022809)	CCDC197 (ENSCHYG00000022755)
Cetacea	ANCESTRAL SPECIES	2	ENSGT00390000000337	ENSGT01030000234551.k.d.b.b.c.a	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000154563.m.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940	ENSGT00950000183000.c.b
Blue whale	MODERN SPECIES	11	ENSBMSG00010012441	GZMH (ENSBMSG00010012451)	ENSBMSG00010012468	GZMB (ENSBMSG00010012482)	STXBP6 (ENSBMSG00010012498)	NOVA1 (ENSBMSG00010012536)	ENSBMSG00010012567	ENSBMSG00010012582	ENSBMSG00010012592	FOXG1 (ENSBMSG00010012602)	PRKD1 (ENSBMSG00010012633)	ENSBMSG00010012692	SCFD1 (ENSBMSG00010012723)	COCH (ENSBMSG00010012783) #20	STRN3 (ENSBMSG00010012838) #21	AP4S1 (ENSBMSG00010012875) #22	HECTD1 (ENSBMSG00010012906) #23	HEATR5A (ENSBMSG00010012932) #24	DTD2 (ENSBMSG00010012949) #25	GPR33 (ENSBMSG00010012958)	NUBPL (ENSBMSG00010012964)	ARHGAP5 (ENSBMSG00010012978)	AKAP6 (ENSBMSG00010013021)	NPAS3 (ENSBMSG00010013089)	EGLN3 (ENSBMSG00010013202)	ENSBMSG00010013221	ENSBMSG00010013231	ENSBMSG00010013245	ENSBMSG00010013286	ENSBMSG00010013306	ENSBMSG00010013323
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00390000000337	ENSGT01030000234551.k.d.b.b.c.a	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000154563.m.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332	ENSGT00940000154940	ENSGT00950000183000.c.b
Sperm whale	MODERN SPECIES	2	ENSPCTG00005005862	ENSPCTG00005005891	GZMH (ENSPCTG00005005924)	ENSPCTG00005005984	GZMB (ENSPCTG00005006025)	STXBP6 (ENSPCTG00005006076)	NOVA1 (ENSPCTG00005006112)	ENSPCTG00005006193	FOXG1 (ENSPCTG00005006210)	PRKD1 (ENSPCTG00005006240)	ENSPCTG00005006324	G2E3 (ENSPCTG00005006361)	SCFD1 (ENSPCTG00005006460)	COCH (ENSPCTG00005006564) #20	STRN3 (ENSPCTG00005006776) #21	AP4S1 (ENSPCTG00005006956) #22	HECTD1 (ENSPCTG00005007027) #23	ENSPCTG00005007130	HEATR5A (ENSPCTG00005007185) #24	DTD2 (ENSPCTG00005007351) #25	GPR33 (ENSPCTG00005007371)	ENSPCTG00005007379	ENSPCTG00005007388	NUBPL (ENSPCTG00005007415)	ENSPCTG00005007465	ARHGAP5 (ENSPCTG00005007494)	AKAP6 (ENSPCTG00005007589)	NPAS3 (ENSPCTG00005007723)	EGLN3 (ENSPCTG00005008171)	SPTSSA (ENSPCTG00005008208)	ENSPCTG00005008216
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00390000000337	ENSGT01030000234551.k.d.b.b.c.a	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT00940000154563.m.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B.l	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000015821.h	ENSGT00390000002766.b.b	ENSGT00390000001332.m	ENSGT00940000154940
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT01000000214889	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154563.m.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B.l	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332.m	ENSGT00940000178928	ENSGT00940000154940
Monodontidae	ANCESTRAL SPECIES	11	ENSGT01100000263511.b.a.a.a.b.a.a.a.b.a.b.a.a.b.a.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.b	ENSGT01030000234551.k.d.b.a.a.a.b.a	ENSGT01030000234551.k.d.b.a.a.a.a	ENSGT01030000234551.k.d.b.a.a.a.b.b.b	ENSGT00940000156499	ENSGT00940000155573	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154563.m.b	ENSGT00940000160678.a	ENSGT00950000183024.a.b.a	ENSGT00950000182865.b.a.a	ENSGT00550000074845	ENSGT00940000159386 #20	ENSGT00950000183095.a.a #21	ENSGT00970000193421.B #22	ENSGT00940000156572 #23	ENSGT00390000006205.b #24	ENSGT00940000153431.a #25	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00910000147163	ENSGT00940000154553.a.b	ENSGT00810000125473.B.l	ENSGT00940000166226	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000002766.b.b	ENSGT00390000001332.m	ENSGT00940000178928	ENSGT00940000154940
Narwhal	MODERN SPECIES	308	ENSMMNG00015017063	GZMH (ENSMMNG00015017095)	ENSMMNG00015017165	GZMB (ENSMMNG00015017321)	STXBP6 (ENSMMNG00015017391)	NOVA1 (ENSMMNG00015017472)	ENSMMNG00015017696	ENSMMNG00015017733	FOXG1 (ENSMMNG00015017758)	PRKD1 (ENSMMNG00015017800)	G2E3 (ENSMMNG00015017922)	SCFD1 (ENSMMNG00015017990)	ENSMMNG00015018060	COCH (ENSMMNG00015018104) #20	STRN3 (ENSMMNG00015018258) #21	AP4S1 (ENSMMNG00015018404) #22	HECTD1 (ENSMMNG00015018463) #23	HEATR5A (ENSMMNG00015018679) #24	DTD2 (ENSMMNG00015018797) #25	GPR33 (ENSMMNG00015018815)	NUBPL (ENSMMNG00015018841)	ENSMMNG00015018891	ARHGAP5 (ENSMMNG00015018917)	AKAP6 (ENSMMNG00015018988)	NPAS3 (ENSMMNG00015019078)	EGLN3 (ENSMMNG00015019291)	SPTSSA (ENSMMNG00015019349)	ENSMMNG00015019371	ENSMMNG00015019404	SNX6 (ENSMMNG00015019443)	CFL2 (ENSMMNG00015019505)
Beluga whale	MODERN SPECIES	44	ENSDLEG00000018089	ENSDLEG00000018087	GZMH (ENSDLEG00000018044)	ENSDLEG00000017935	GZMB (ENSDLEG00000017882)	STXBP6 (ENSDLEG00000017850)	NOVA1 (ENSDLEG00000017821)	ENSDLEG00000017806	ENSDLEG00000017774	FOXG1 (ENSDLEG00000017768)	PRKD1 (ENSDLEG00000017654)	G2E3 (ENSDLEG00000017592)	SCFD1 (ENSDLEG00000016160)	COCH (ENSDLEG00000015954) #20	STRN3 (ENSDLEG00000015905) #21	AP4S1 (ENSDLEG00000015895) #22	HECTD1 (ENSDLEG00000015830) #23	HEATR5A (ENSDLEG00000013600) #24	DTD2 (ENSDLEG00000013452) #25	GPR33 (ENSDLEG00000013450)	NUBPL (ENSDLEG00000013432)	ENSDLEG00000012791	ARHGAP5 (ENSDLEG00000012779)	ENSDLEG00000012755	ENSDLEG00000012743	ENSDLEG00000012728	NPAS3 (ENSDLEG00000012702)	EGLN3 (ENSDLEG00000012687)	ENSDLEG00000012666	SPTSSA (ENSDLEG00000012661)	ENSDLEG00000012640
Vaquita	MODERN SPECIES	11	GZMH (ENSPSNG00000014903)	ENSPSNG00000015017	GZMB (ENSPSNG00000015289)	STXBP6 (ENSPSNG00000015449)	NOVA1 (ENSPSNG00000015532)	ENSPSNG00000015685	ENSPSNG00000015742	ENSPSNG00000015766	FOXG1 (ENSPSNG00000015806)	PRKD1 (ENSPSNG00000015859)	G2E3 (ENSPSNG00000015993)	SCFD1 (ENSPSNG00000016119)	ENSPSNG00000016285	COCH (ENSPSNG00000016321) #20	STRN3 (ENSPSNG00000016653) #21	AP4S1 (ENSPSNG00000016811) #22	HECTD1 (ENSPSNG00000016911) #23	HEATR5A (ENSPSNG00000017090) #24	DTD2 (ENSPSNG00000017275) #25	NUBPL (ENSPSNG00000017395)	ENSPSNG00000017433	ARHGAP5 (ENSPSNG00000017472)	AKAP6 (ENSPSNG00000017615)	NPAS3 (ENSPSNG00000017739)	EGLN3 (ENSPSNG00000018355)	ENSPSNG00000018446	SPTSSA (ENSPSNG00000018482)	ENSPSNG00000018496	ENSPSNG00000018519	ENSPSNG00000018564	SNX6 (ENSPSNG00000018667)
Dolphin	MODERN SPECIES	3098																AP4S1 (ENSTTRG00000003740) #22	HECTD1 (ENSTTRG00000003749) #23	HEATR5A (ENSTTRG00000003780) #24	DTD2 (ENSTTRG00000003788) #25